BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024229
(270 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LAP8|DOF46_ARATH Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana GN=DOF4.6
PE=2 SV=2
Length = 342
Score = 136 bits (343), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/308 (34%), Positives = 143/308 (46%), Gaps = 92/308 (29%)
Query: 47 ERRPKPQRERVLNCPRCNSTDTKFCYYNNYSFSQPRHFCKTCRRYWTAGGSLRNVPVGGG 106
ER+ +P++++ +NCPRCNST+TKFCYYNNYS +QPR+FCK CRRYWT GGSLRN+PVGGG
Sbjct: 42 ERKARPEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGG 101
Query: 107 SRKNKRSSSSSGLSMNLTDLNTPCFPDQSAVSSDHN-------------PNSTIHHEYHR 153
SRKNKRS SSS N +T P SDH+ N +
Sbjct: 102 SRKNKRSHSSSSDISNNHSDSTQ--PATKKHLSDHHHHLMSMSQQGLTGQNPKFLETTQQ 159
Query: 154 DLKLAYPP------NYTE------------------SKISSSSSASSSEFN--------- 180
DL L + P N+T+ +SS S+ ++S +
Sbjct: 160 DLNLGFSPHGMIRTNFTDLIHNIGNNTNKSNNNNNPLIVSSCSAMATSSLDLIRNNSNNG 219
Query: 181 -----SFMGMPAAASNSNANATCQSGNILLQEPKK-----------TLDFSSSDGF---- 220
SFMG P N SG +Q+ K +LD ++GF
Sbjct: 220 NSSNSSFMGFPV------HNQDPASGGFSMQDHYKPCNTNTTLLGFSLDHHHNNGFHGGF 273
Query: 221 ----------ENNGARLWFPLQDIK-PEISNTTTDRFELNRGQ-------AQAESTGYWT 262
++ R FP +D+K P S++ T ++N Q A A S GYWT
Sbjct: 274 QGGEEGGEGGDDVNGRHLFPFEDLKLPVSSSSATINVDINEHQKRGSGSDAAATSGGYWT 333
Query: 263 RLLGGGSW 270
+L GGSW
Sbjct: 334 GMLSGGSW 341
>sp|Q43385|DOF37_ARATH Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana GN=DOF3.7
PE=1 SV=2
Length = 296
Score = 126 bits (317), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 129/245 (52%), Gaps = 29/245 (11%)
Query: 45 TLERRPKPQRERVLNCPRCNSTDTKFCYYNNYSFSQPRHFCKTCRRYWTAGGSLRNVPVG 104
T+E R +E+V NCPRCNST+TKFCYYNNYS +QPR+FCK CRRYWT GGSLRNVPVG
Sbjct: 62 TMETRKARPQEKV-NCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVG 120
Query: 105 GGSRKNKRSSS--SSGLSMNLTDLNTPC-FPDQSAVSSDHNPN----STIHHEYHRDLKL 157
G SRKNKRSS+ +S + L DLN P F Q S+ + N + +H L+L
Sbjct: 121 GSSRKNKRSSTPLASPSNPKLPDLNPPILFSSQIPNKSNKDLNLLSFPVMQDHHHHALEL 180
Query: 158 AYPPNYTESKISS----SSSASSSEFNSFMGMPAA----ASNSNANATCQSGNILLQEPK 209
+ +++ S+S S +G P SN+N + + +
Sbjct: 181 LRSNGVSSRGMNTFLPGQMMDSNSVLYSSLGFPTMPDYKQSNNNLSFSIDHHQGIGHNTI 240
Query: 210 KTLDFSSSDGFENNGA-RLWFPLQDIKPEISNTTTDRFELNRGQAQAESTGYWTRLL--- 265
+ + + + NGA R+ FP D+K E+S+TT ++ N YW +
Sbjct: 241 NSNQRAQDNNDDMNGASRVLFPFSDMK-ELSSTTQEKSHGN--------NTYWNGMFSNT 291
Query: 266 GGGSW 270
GG SW
Sbjct: 292 GGSSW 296
>sp|Q84TE9|DOF53_ARATH Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana GN=DOF5.3
PE=2 SV=1
Length = 257
Score = 119 bits (298), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/175 (46%), Positives = 99/175 (56%), Gaps = 13/175 (7%)
Query: 45 TLERRPKPQRERVLNCPRCNSTDTKFCYYNNYSFSQPRHFCKTCRRYWTAGGSLRNVPVG 104
T RP+P E L CPRC+ST+TKFCYYNNYS +QPR+FCK+CRRYWT GG+LRN+PVG
Sbjct: 43 TAVTRPQPP-ELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVG 101
Query: 105 GGSRKNKRSSSSSGLSMNLTDLNTPCFPDQSAVSSDHNPNSTIHHEYHRDLKLAYPPNYT 164
GG RKNKRS+SS+ S+ T P D V S N ++E H DL LA+
Sbjct: 102 GGCRKNKRSTSSAARSLRTTP--EPASHD-GKVFSAAGFNGYSNNE-HIDLSLAFALLNK 157
Query: 165 ESKISSSSSASSSEFNS-----FMGMPAAASNSNANATCQSGN--ILLQEPKKTL 212
+ SSS SE S GM S NAT GN L +P + L
Sbjct: 158 QHPGSSSQLGFHSELGSSHQSDMEGM-FGTSQQKENATYAFGNGSSGLGDPSRVL 211
>sp|O24463|PBF_MAIZE Dof zinc finger protein PBF OS=Zea mays GN=PBF PE=1 SV=1
Length = 328
Score = 119 bits (298), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 57/68 (83%)
Query: 47 ERRPKPQRERVLNCPRCNSTDTKFCYYNNYSFSQPRHFCKTCRRYWTAGGSLRNVPVGGG 106
ER+P+PQ L CPRC+S +TKFCYYNNYS SQPR+FCK CRRYWT GG+LRNVP+GGG
Sbjct: 49 ERKPRPQLPEALKCPRCDSNNTKFCYYNNYSMSQPRYFCKACRRYWTHGGTLRNVPIGGG 108
Query: 107 SRKNKRSS 114
RKNK +S
Sbjct: 109 CRKNKHAS 116
>sp|Q9M2U1|DOF36_ARATH Dof zinc finger protein DOF3.6 OS=Arabidopsis thaliana GN=DOF3.6
PE=1 SV=2
Length = 323
Score = 117 bits (294), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 63/82 (76%), Gaps = 3/82 (3%)
Query: 39 EAGSNPTLERR---PKPQRERVLNCPRCNSTDTKFCYYNNYSFSQPRHFCKTCRRYWTAG 95
+A N +ER P E LNCPRC+ST+TKFCY+NNYS +QPRHFCKTCRRYWT G
Sbjct: 54 QARVNSMVERARIAKVPLPEAALNCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRG 113
Query: 96 GSLRNVPVGGGSRKNKRSSSSS 117
GSLRNVPVGGG R+NKRS S S
Sbjct: 114 GSLRNVPVGGGFRRNKRSKSRS 135
>sp|Q84JQ8|DOF18_ARATH Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana GN=DOF1.8
PE=2 SV=1
Length = 352
Score = 114 bits (286), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 45/61 (73%), Positives = 56/61 (91%)
Query: 46 LERRPKPQRERVLNCPRCNSTDTKFCYYNNYSFSQPRHFCKTCRRYWTAGGSLRNVPVGG 105
+ER+ +P++++ LNCPRCNS +TKFCYYNNYS +QPR+FCK CRRYWTAGGSLRN+PVGG
Sbjct: 37 VERKARPEKDQALNCPRCNSLNTKFCYYNNYSLTQPRYFCKDCRRYWTAGGSLRNIPVGG 96
Query: 106 G 106
G
Sbjct: 97 G 97
>sp|Q9M161|DOF41_ARATH Dof zinc finger protein DOF4.1 OS=Arabidopsis thaliana GN=DOF4.1
PE=2 SV=2
Length = 294
Score = 114 bits (284), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 87/248 (35%), Positives = 123/248 (49%), Gaps = 43/248 (17%)
Query: 45 TLERRPKPQRERVLNCPRCNSTDTKFCYYNNYSFSQPRHFCKTCRRYWTAGGSLRNVPVG 104
T+ RP+ R NCPRCNS++TKFCYYNNYS +QPR+ CK+CRRYWT GGSLRNVPVG
Sbjct: 59 TMSTRPQEPR----NCPRCNSSNTKFCYYNNYSLAQPRYLCKSCRRYWTEGGSLRNVPVG 114
Query: 105 GGSRKNKR----SSSSSGLSMNLTDLNTPCFPDQSAVSSDHNPNSTIHHEYHRDLKLAYP 160
GGSRKNK+ +SS+S + NL DLN P SS + N + H+ + DL L++
Sbjct: 115 GGSRKNKKLPFPNSSTSSSTKNLPDLNPPFV----FTSSASSSNPSKTHQNNNDLSLSFS 170
Query: 161 PNYTESKISSSSSASSSE---------FNSFMGMPAAASNSNANATCQSGNILLQEPKKT 211
+ + S + F + MGM + + PKK
Sbjct: 171 SPMQDKRAQGHYGHFSEQVVTGGQNCLFQAPMGMIQFRQEYDH-----------EHPKKN 219
Query: 212 LDFS---------SSDGFENN--GARLWFPLQDIKPEISNTTTDRFELNRGQAQAESTGY 260
L FS + D F N G+++ +P D + + + N+ + S
Sbjct: 220 LGFSLDRNEEEIGNHDNFVVNEEGSKMMYPYGDHEDRQQHHHVRHDDGNKKREGGSSNEL 279
Query: 261 WTRLLGGG 268
W+ ++ GG
Sbjct: 280 WSGIILGG 287
>sp|Q9M1E6|DOF32_ARATH Dof zinc finger protein DOF3.2 OS=Arabidopsis thaliana GN=DOF3.2
PE=2 SV=1
Length = 245
Score = 112 bits (279), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 50/74 (67%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
Query: 44 PTLERRPKPQRERVLNCPRCNSTDTKFCYYNNYSFSQPRHFCKTCRRYWTAGGSLRNVPV 103
P RP P E+ L CPRC+ST+TKFCYYNNYS SQPR+FCK+CRRYWT GG LRN+P+
Sbjct: 27 PLSATRPAPP-EQSLRCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGILRNIPI 85
Query: 104 GGGSRKNKRSSSSS 117
GG RK+KRSSS++
Sbjct: 86 GGAYRKHKRSSSAT 99
>sp|O82155|DOF17_ARATH Dof zinc finger protein DOF1.7 OS=Arabidopsis thaliana GN=DOF1.7
PE=2 SV=1
Length = 194
Score = 110 bits (276), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 54/96 (56%), Positives = 66/96 (68%), Gaps = 3/96 (3%)
Query: 47 ERRPKPQRERVLNCPRCNSTDTKFCYYNNYSFSQPRHFCKTCRRYWTAGGSLRNVPVGGG 106
+ +P+ + L CPRC+S +TKFCYYNNY+ SQPRHFCK CRRYWT GG+LRN+PVGGG
Sbjct: 22 QNQPELPEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGG 81
Query: 107 SRK-NKRSSSSSGLSMNLTDLNTPCFPDQSAVSSDH 141
+RK NKRS SS S NL + PD S+
Sbjct: 82 TRKSNKRSGSSP--SSNLKNQTVAEKPDHHGSGSEE 115
>sp|Q8LE43|DOF21_ARATH Dof zinc finger protein DOF2.1 OS=Arabidopsis thaliana GN=DOF2.1
PE=2 SV=2
Length = 288
Score = 110 bits (274), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 48/59 (81%), Positives = 54/59 (91%)
Query: 59 NCPRCNSTDTKFCYYNNYSFSQPRHFCKTCRRYWTAGGSLRNVPVGGGSRKNKRSSSSS 117
NCPRC S +TKFCYYNNYS SQPR+FCK+CRRYWT GG+LRNVPVGGG R+NKRSSSS+
Sbjct: 49 NCPRCESPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRRNKRSSSSA 107
>sp|O80928|DOF24_ARATH Dof zinc finger protein DOF2.4 OS=Arabidopsis thaliana GN=DOF2.4
PE=2 SV=1
Length = 330
Score = 110 bits (274), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 45/59 (76%), Positives = 52/59 (88%)
Query: 55 ERVLNCPRCNSTDTKFCYYNNYSFSQPRHFCKTCRRYWTAGGSLRNVPVGGGSRKNKRS 113
E L CPRC ST+TKFCY+NNYS +QPRHFCKTCRRYWT GG+LRNVPVGGG R+N+R+
Sbjct: 86 EAALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNRRT 144
>sp|Q9LSL6|DOF57_ARATH Dof zinc finger protein DOF5.7 OS=Arabidopsis thaliana GN=DOF5.7
PE=2 SV=1
Length = 316
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 46/61 (75%), Positives = 53/61 (86%)
Query: 53 QRERVLNCPRCNSTDTKFCYYNNYSFSQPRHFCKTCRRYWTAGGSLRNVPVGGGSRKNKR 112
Q ++ L CPRCNS +TKFCYYNNYS SQPRHFCK+CRRYWT GG+LRNVP+GGG RK K+
Sbjct: 36 QDQQNLKCPRCNSPNTKFCYYNNYSLSQPRHFCKSCRRYWTRGGALRNVPIGGGCRKTKK 95
Query: 113 S 113
S
Sbjct: 96 S 96
>sp|Q8LDR0|DOF54_ARATH Dof zinc finger protein DOF5.4 OS=Arabidopsis thaliana GN=DOF5.4
PE=2 SV=2
Length = 307
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 56/75 (74%), Gaps = 6/75 (8%)
Query: 47 ERRPKPQRERVLN------CPRCNSTDTKFCYYNNYSFSQPRHFCKTCRRYWTAGGSLRN 100
+RR + + +LN CPRCNS +TKFCYYNNY+ SQPRHFCK CRRYWT GG LRN
Sbjct: 34 DRRMRAHQNNILNHHQSLKCPRCNSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRN 93
Query: 101 VPVGGGSRKNKRSSS 115
VPVGGG RK KRS +
Sbjct: 94 VPVGGGCRKAKRSKT 108
>sp|Q8LFV3|CDF3_ARATH Cyclic dof factor 3 OS=Arabidopsis thaliana GN=CDF3 PE=1 SV=2
Length = 448
Score = 108 bits (271), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 44/60 (73%), Positives = 52/60 (86%)
Query: 56 RVLNCPRCNSTDTKFCYYNNYSFSQPRHFCKTCRRYWTAGGSLRNVPVGGGSRKNKRSSS 115
++L CPRC S +TKFCYYNNY+ +QPRHFCK C+RYWTAGG++RNVPVG G RKNK SSS
Sbjct: 108 KILPCPRCKSMETKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKSSSS 167
>sp|Q9LZ56|DOF51_ARATH Dof zinc finger protein DOF5.1 OS=Arabidopsis thaliana GN=DOF5.1
PE=2 SV=1
Length = 399
Score = 108 bits (271), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 56/79 (70%), Gaps = 2/79 (2%)
Query: 34 FVTPMEAGSNPTLERRPKPQRERVLNCPRCNSTDTKFCYYNNYSFSQPRHFCKTCRRYWT 93
+ P L P P E L CPRC+ST+TKFCY+NNYS +QPRHFCK CRRYWT
Sbjct: 73 LIRPGSMAERARLANIPLP--ETALKCPRCDSTNTKFCYFNNYSLTQPRHFCKACRRYWT 130
Query: 94 AGGSLRNVPVGGGSRKNKR 112
GG+LR+VPVGGG R+NKR
Sbjct: 131 RGGALRSVPVGGGCRRNKR 149
>sp|Q9FGD6|DOF58_ARATH Dof zinc finger protein DOF5.8 OS=Arabidopsis thaliana GN=DOF5.8
PE=2 SV=1
Length = 225
Score = 108 bits (270), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 49/86 (56%), Positives = 66/86 (76%), Gaps = 1/86 (1%)
Query: 50 PKPQRERVLNCPRCNSTDTKFCYYNNYSFSQPRHFCKTCRRYWTAGGSLRNVPVGGGSRK 109
P Q+E+ L+CPRC ST+TKFCYYNNY+FSQPRHFCK+CRRYWT GG+LR++PVGG SRK
Sbjct: 25 PTDQQEQ-LSCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGVSRK 83
Query: 110 NKRSSSSSGLSMNLTDLNTPCFPDQS 135
+ + S + + + + + FP Q+
Sbjct: 84 SSKRSRTYSSAATTSVVGSRNFPLQA 109
>sp|Q9ZPY0|DOF25_ARATH Dof zinc finger protein DOF2.5 OS=Arabidopsis thaliana GN=DOF2.5
PE=2 SV=3
Length = 369
Score = 108 bits (270), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 46/59 (77%), Positives = 52/59 (88%), Gaps = 2/59 (3%)
Query: 47 ERRPKPQRERVLNCPRCNSTDTKFCYYNNYSFSQPRHFCKTCRRYWTAGGSLRNVPVGG 105
ER+ +PQ + LNCPRCNST+TKFCYYNNYS +QPR+FCK CRRYWT GGSLRNVPVGG
Sbjct: 71 ERKARPQEK--LNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGG 127
>sp|Q93ZL5|CDF2_ARATH Cyclic dof factor 2 OS=Arabidopsis thaliana GN=CDF2 PE=1 SV=2
Length = 457
Score = 107 bits (268), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 57/70 (81%)
Query: 55 ERVLNCPRCNSTDTKFCYYNNYSFSQPRHFCKTCRRYWTAGGSLRNVPVGGGSRKNKRSS 114
+++L CPRCNS +TKFCYYNNY+ +QPRHFCK C+RYWTAGG++RNVPVG G RKNK +
Sbjct: 135 DKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVPVGAGRRKNKSPA 194
Query: 115 SSSGLSMNLT 124
S +++T
Sbjct: 195 SHYNRHVSIT 204
>sp|Q39088|DOF34_ARATH Dof zinc finger protein DOF3.4 OS=Arabidopsis thaliana GN=DOF3.4
PE=1 SV=2
Length = 253
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 46/78 (58%), Positives = 57/78 (73%)
Query: 37 PMEAGSNPTLERRPKPQRERVLNCPRCNSTDTKFCYYNNYSFSQPRHFCKTCRRYWTAGG 96
P P P ++ L CPRC+S++TKFCYYNNY+FSQPRHFCK CRRYWT GG
Sbjct: 9 PRRIAMKPNGVTVPISDQQEQLPCPRCDSSNTKFCYYNNYNFSQPRHFCKACRRYWTHGG 68
Query: 97 SLRNVPVGGGSRKNKRSS 114
+LR+VPVGGG+RK+ + S
Sbjct: 69 TLRDVPVGGGTRKSAKRS 86
>sp|Q9SVC5|DOF35_ARATH Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana GN=DOF3.5
PE=3 SV=1
Length = 247
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 46/59 (77%), Positives = 52/59 (88%)
Query: 60 CPRCNSTDTKFCYYNNYSFSQPRHFCKTCRRYWTAGGSLRNVPVGGGSRKNKRSSSSSG 118
CPRC S++TKFCYYNNYS +QPR+FCK CRRYWT GGSLRNVPVGGG RK++R SSSG
Sbjct: 27 CPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKSRRPKSSSG 85
>sp|Q9FZA4|DOF14_ARATH Dof zinc finger protein DOF1.4 OS=Arabidopsis thaliana GN=DOF1.4
PE=2 SV=1
Length = 311
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 44/55 (80%), Positives = 49/55 (89%)
Query: 58 LNCPRCNSTDTKFCYYNNYSFSQPRHFCKTCRRYWTAGGSLRNVPVGGGSRKNKR 112
L CPRC+S++TKFCYYNNYS SQPRHFCK C+RYWT GG+LRNVPVGG RKNKR
Sbjct: 27 LKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGSYRKNKR 81
>sp|Q9LQX4|DOF13_ARATH Dof zinc finger protein DOF1.3 OS=Arabidopsis thaliana GN=DOF1.3
PE=2 SV=1
Length = 366
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 42/57 (73%), Positives = 50/57 (87%)
Query: 55 ERVLNCPRCNSTDTKFCYYNNYSFSQPRHFCKTCRRYWTAGGSLRNVPVGGGSRKNK 111
+++L CPRCNS DTKFCYYNNY+ +QPRHFC+ C+RYWTAGGS+R VPVG G RKNK
Sbjct: 102 DKILPCPRCNSADTKFCYYNNYNVNQPRHFCRKCQRYWTAGGSMRIVPVGSGRRKNK 158
>sp|Q84K52|DOF47_ARATH Dof zinc finger protein DOF4.7 OS=Arabidopsis thaliana GN=DOF4.7
PE=2 SV=1
Length = 246
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 45/65 (69%), Positives = 53/65 (81%), Gaps = 1/65 (1%)
Query: 48 RRPKPQRERVLNCPRCNSTDTKFCYYNNYSFSQPRHFCKTCRRYWTAGGSLRNVPVGGGS 107
+ P P + VL CPRC+S +TKFCYYNNYS SQPRH+CK CRRYWT GG+LRNVP+GG +
Sbjct: 31 KEPSPATQPVLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGGALRNVPIGGST 90
Query: 108 R-KNK 111
R KNK
Sbjct: 91 RNKNK 95
>sp|Q94AR6|DOF31_ARATH Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana GN=DOF3.1
PE=2 SV=2
Length = 204
Score = 105 bits (261), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 44/53 (83%), Positives = 49/53 (92%)
Query: 58 LNCPRCNSTDTKFCYYNNYSFSQPRHFCKTCRRYWTAGGSLRNVPVGGGSRKN 110
L CPRC+S +TKFCYYNNY+ SQPRHFCK+CRRYWT GG+LRNVPVGGGSRKN
Sbjct: 29 LKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRNVPVGGGSRKN 81
>sp|Q9FM03|DOF56_ARATH Dof zinc finger protein DOF5.6 OS=Arabidopsis thaliana GN=DOF5.6
PE=2 SV=2
Length = 372
Score = 105 bits (261), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 44/61 (72%), Positives = 49/61 (80%)
Query: 48 RRPKPQRERVLNCPRCNSTDTKFCYYNNYSFSQPRHFCKTCRRYWTAGGSLRNVPVGGGS 107
RR +P + CPRC ST TKFCYYNNYS SQPR+FCKTCRRYWT GG+LRN+PVGGG
Sbjct: 63 RRLRPPHDHPQKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGC 122
Query: 108 R 108
R
Sbjct: 123 R 123
>sp|Q8W1E3|CDF1_ARATH Cyclic dof factor 1 OS=Arabidopsis thaliana GN=CDF1 PE=1 SV=2
Length = 298
Score = 104 bits (260), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 65/90 (72%), Gaps = 5/90 (5%)
Query: 56 RVLNCPRCNSTDTKFCYYNNYSFSQPRHFCKTCRRYWTAGGSLRNVPVGGGSRKNKRSSS 115
++L CPRCNS +TKFCYYNNY+ +QPRHFCK C+RYWT+GG++R+VP+G G RKNK +S
Sbjct: 52 KILPCPRCNSMETKFCYYNNYNVNQPRHFCKACQRYWTSGGTMRSVPIGAGRRKNKNNSP 111
Query: 116 SSGL-SMNLTDLNTPCFP----DQSAVSSD 140
+S + +++ N P D VSS+
Sbjct: 112 TSHYHHVTISETNGPVLSFSLGDDQKVSSN 141
>sp|P68349|DOF12_ARATH Dof zinc finger protein DOF1.2 OS=Arabidopsis thaliana GN=DOF1.2
PE=2 SV=1
Length = 260
Score = 104 bits (259), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 78/146 (53%), Gaps = 6/146 (4%)
Query: 60 CPRCNSTDTKFCYYNNYSFSQPRHFCKTCRRYWTAGGSLRNVPVGGGSRKNKRSSSSSGL 119
CPRC S++TKFCYYNNYS SQPR+FCK CRRYWT GGSLRN+PVGGG RK RS +S
Sbjct: 40 CPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNIPVGGGCRKRSRSRQNSHK 99
Query: 120 SMNLTDLNTPCFPDQSAVSSDHNPNSTIHHEYHRDLKLAYPPNYTESKISSSSSASSSEF 179
+ +Q P S I DL + T+ SS+ + + S+
Sbjct: 100 RFGRNENRPDGLINQDDGFQSSPPGSDI------DLAAVFAQYVTDRSPSSTDNTTGSDQ 153
Query: 180 NSFMGMPAAASNSNANATCQSGNILL 205
+S + A S + CQ ++ L
Sbjct: 154 DSPITTTTHALESLSWDICQETDVDL 179
>sp|Q8L9V6|DOF11_ARATH Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana GN=DOF1.1
PE=1 SV=2
Length = 331
Score = 104 bits (259), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 51/62 (82%)
Query: 58 LNCPRCNSTDTKFCYYNNYSFSQPRHFCKTCRRYWTAGGSLRNVPVGGGSRKNKRSSSSS 117
L CPRC+S++TKFCYYNNY+ +QPRHFCK CRRYWT GG+LRNVPVGGG R+N + +
Sbjct: 77 LKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRNNKKGKNG 136
Query: 118 GL 119
L
Sbjct: 137 NL 138
>sp|P68350|DOF15_ARATH Dof zinc finger protein DOF1.5 OS=Arabidopsis thaliana GN=DOF1.5
PE=1 SV=1
Length = 175
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 60/82 (73%), Gaps = 4/82 (4%)
Query: 42 SNPTLERRPKPQRERVLNCPRCNSTDTKFCYYNNYSFSQPRHFCKTCRRYWTAGGSLRNV 101
S+ T E+RP ++++ CPRC S +TKFCY+NNY+ +QPRHFCK C+RYWTAGG+LRNV
Sbjct: 50 SDLTAEKRP----DKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNV 105
Query: 102 PVGGGSRKNKRSSSSSGLSMNL 123
PVG G RK+K G + L
Sbjct: 106 PVGAGRRKSKPPGRVGGFAELL 127
>sp|O22967|CDF4_ARATH Cyclic dof factor 4 OS=Arabidopsis thaliana GN=CDF4 PE=2 SV=1
Length = 170
Score = 103 bits (257), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 56/70 (80%), Gaps = 4/70 (5%)
Query: 42 SNPTLERRPKPQRERVLNCPRCNSTDTKFCYYNNYSFSQPRHFCKTCRRYWTAGGSLRNV 101
S+ T E+RP ++++ CPRC S +TKFCY+NNY+ +QPRHFCK C RYWTAGG+LRNV
Sbjct: 46 SDLTAEKRP----DKIIACPRCKSMETKFCYFNNYNVNQPRHFCKGCHRYWTAGGALRNV 101
Query: 102 PVGGGSRKNK 111
PVG G RK+K
Sbjct: 102 PVGAGRRKSK 111
>sp|Q9ZV33|DOF22_ARATH Dof zinc finger protein DOF2.2 OS=Arabidopsis thaliana GN=DOF2.2
PE=2 SV=2
Length = 340
Score = 102 bits (253), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 43/71 (60%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 39 EAGSNPTLERRPKPQRERVLNCPRCNSTDTKFCYYNNYSFSQPRHFCKTCRRYWTAGGSL 98
+A L + +P E L CPRC+S +TKFCY+NNY+ +QPRHFCK CRRYWT GG+L
Sbjct: 76 QAAERARLAKNSQPP-EGALKCPRCDSANTKFCYFNNYNLTQPRHFCKACRRYWTRGGAL 134
Query: 99 RNVPVGGGSRK 109
RNVPVGGG R+
Sbjct: 135 RNVPVGGGCRR 145
>sp|P38564|MNB1A_MAIZE Dof zinc finger protein MNB1A OS=Zea mays GN=MNB1A PE=1 SV=2
Length = 238
Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 42/51 (82%), Positives = 45/51 (88%)
Query: 60 CPRCNSTDTKFCYYNNYSFSQPRHFCKTCRRYWTAGGSLRNVPVGGGSRKN 110
CPRC S DTKFCYYNNY+ SQPRHFCK CRRYWT GG+LRNVPVGGG+RK
Sbjct: 49 CPRCASRDTKFCYYNNYNTSQPRHFCKGCRRYWTKGGTLRNVPVGGGTRKK 99
>sp|Q9SEZ3|CDF5_ARATH Cyclic dof factor 5 OS=Arabidopsis thaliana GN=CDF5 PE=2 SV=1
Length = 399
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 50/57 (87%)
Query: 55 ERVLNCPRCNSTDTKFCYYNNYSFSQPRHFCKTCRRYWTAGGSLRNVPVGGGSRKNK 111
++++ CPRC S +TKFCYYNNY+ +QPR+FC+ C+RYWTAGGS+RNVPVG G RKNK
Sbjct: 129 DKLIPCPRCESANTKFCYYNNYNVNQPRYFCRNCQRYWTAGGSMRNVPVGSGRRKNK 185
>sp|Q9SUA9|DOF44_ARATH Dof zinc finger protein DOF4.4 OS=Arabidopsis thaliana GN=DOF4.4
PE=3 SV=1
Length = 210
Score = 98.6 bits (244), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/65 (67%), Positives = 51/65 (78%), Gaps = 4/65 (6%)
Query: 48 RRPKPQRERVLNCPRCNSTDTKFCYYNNYSFSQPRHFCKTCRRYWTAGGSLRNVPVGGGS 107
+RP P R CPRC+S +TKFC+YNNYS SQPR+FCK CRRYWT GG+LRN+PVGG
Sbjct: 18 KRPPPSRV----CPRCDSDNTKFCFYNNYSESQPRYFCKNCRRYWTHGGALRNIPVGGSC 73
Query: 108 RKNKR 112
RK KR
Sbjct: 74 RKPKR 78
>sp|Q9SX97|DOF16_ARATH Dof zinc finger protein DOF1.6 OS=Arabidopsis thaliana GN=DOF1.6
PE=2 SV=1
Length = 209
Score = 98.2 bits (243), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 50/64 (78%)
Query: 44 PTLERRPKPQRERVLNCPRCNSTDTKFCYYNNYSFSQPRHFCKTCRRYWTAGGSLRNVPV 103
P+ P P L CPRCNST TKFCYYNNY+ +QPR++CK+CRRYWT GG+LR+VPV
Sbjct: 15 PSTAAYPPPNLAEPLPCPRCNSTTTKFCYYNNYNLAQPRYYCKSCRRYWTQGGTLRDVPV 74
Query: 104 GGGS 107
GGG+
Sbjct: 75 GGGT 78
>sp|Q9SUB0|DOF43_ARATH Dof zinc finger protein DOF4.3 OS=Arabidopsis thaliana GN=DOF4.3
PE=3 SV=1
Length = 232
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 43/52 (82%)
Query: 60 CPRCNSTDTKFCYYNNYSFSQPRHFCKTCRRYWTAGGSLRNVPVGGGSRKNK 111
C RC+S +TKFCYYNNYS QPR+FCK CRRYWT GG+LRNVP+GG SR +
Sbjct: 27 CARCDSDNTKFCYYNNYSEFQPRYFCKNCRRYWTHGGALRNVPIGGSSRAKR 78
>sp|O49550|DOF45_ARATH Dof zinc finger protein DOF4.5 OS=Arabidopsis thaliana GN=DOF4.5
PE=3 SV=1
Length = 249
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 42/52 (80%)
Query: 60 CPRCNSTDTKFCYYNNYSFSQPRHFCKTCRRYWTAGGSLRNVPVGGGSRKNK 111
C RC+S +TKFCYYNNY QPR+FCK CRRYWT GG+LRN+P+GG SR +
Sbjct: 27 CARCDSDNTKFCYYNNYCEFQPRYFCKNCRRYWTHGGALRNIPIGGSSRAKR 78
>sp|Q9SUB1|DOF42_ARATH Dof zinc finger protein DOF4.2 OS=Arabidopsis thaliana GN=DOF4.2
PE=3 SV=1
Length = 194
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 32/46 (69%)
Query: 60 CPRCNSTDTKFCYYNNYSFSQPRHFCKTCRRYWTAGGSLRNVPVGG 105
CPRC S T+F Y+NN SQPR+ CK C R WT GG LRN+PV G
Sbjct: 23 CPRCYSDQTRFSYFNNNKKSQPRYKCKNCCRCWTHGGVLRNIPVTG 68
>sp|P62286|ASPM_CANFA Abnormal spindle-like microcephaly-associated protein homolog
OS=Canis familiaris GN=ASPM PE=2 SV=2
Length = 3469
Score = 31.6 bits (70), Expect = 5.8, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 39/92 (42%)
Query: 131 FPDQSAVSSDHNPNSTIHHEYHRDLKLAYPPNYTESKISSSSSASSSEFNSFMGMPAAAS 190
F ++ + N + I+ + + KL P + + + S + +SF+ AA+
Sbjct: 264 FSEKVVNETSFNSTNNINDQTEENCKLILTPACSSTLNITQSQGNFLSPDSFVKNSRAAN 323
Query: 191 NSNANATCQSGNILLQEPKKTLDFSSSDGFEN 222
N TC S NIL+++ L S EN
Sbjct: 324 NELEVVTCLSSNILMKDNSMPLHLESKSVHEN 355
>sp|B0G163|EXOC5_DICDI Exocyst complex component 5 OS=Dictyostelium discoideum GN=exoc5
PE=3 SV=1
Length = 978
Score = 31.6 bits (70), Expect = 6.4, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 25/50 (50%)
Query: 177 SEFNSFMGMPAAASNSNANATCQSGNILLQEPKKTLDFSSSDGFENNGAR 226
+ F + + AAAS +N A+ Q+ NI + P +S G +N A+
Sbjct: 93 TSFTTSTNLQAAASGNNLQASIQTTNITVTSPSMASPIGTSTGIQNPNAK 142
>sp|A2BTS3|QUEC_PROMS 7-cyano-7-deazaguanine synthase OS=Prochlorococcus marinus (strain
AS9601) GN=queC PE=3 SV=1
Length = 224
Score = 31.2 bits (69), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Query: 159 YPPNYTESKISSSSSASSSEFNSFMGMPAAASNSNANATCQSGNILLQEPKKTLDFSSSD 218
Y P IS + S + + F+G+ A + + C+ I ++ ++ D ++
Sbjct: 98 YVPGRNTIFISVALSYAEAIDADFIGLGVNALDYSGYPDCRPDYI--KKFQELADLANKR 155
Query: 219 GFENNGARLWFPLQDI-KPEISNTTTD 244
G ENN +LW PL D+ K EI D
Sbjct: 156 GRENNPIKLWTPLLDLNKEEIIKLAFD 182
>sp|A3PFI0|QUEC_PROM0 7-cyano-7-deazaguanine synthase OS=Prochlorococcus marinus (strain
MIT 9301) GN=queC PE=3 SV=1
Length = 224
Score = 31.2 bits (69), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Query: 159 YPPNYTESKISSSSSASSSEFNSFMGMPAAASNSNANATCQSGNILLQEPKKTLDFSSSD 218
Y P IS + S + + F+G+ A + + C+ I ++ ++ D ++
Sbjct: 98 YVPGRNTIFISVALSYAEAIDADFIGLGVNALDYSGYPDCRPDYI--KKFQELADLANKR 155
Query: 219 GFENNGARLWFPLQDI-KPEISNTTTD 244
G ENN +LW PL D+ K EI D
Sbjct: 156 GRENNPIKLWTPLLDLNKEEIIKLAFD 182
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.129 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104,703,842
Number of Sequences: 539616
Number of extensions: 4348558
Number of successful extensions: 11679
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 85
Number of HSP's that attempted gapping in prelim test: 10564
Number of HSP's gapped (non-prelim): 738
length of query: 270
length of database: 191,569,459
effective HSP length: 116
effective length of query: 154
effective length of database: 128,974,003
effective search space: 19861996462
effective search space used: 19861996462
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 60 (27.7 bits)