Citrus Sinensis ID: 024230

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270
Protein Sequence
MAQPQQTESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNGFFFS
Secondary Structure (PSIPRED)
cccccccccccccccccccccEEEEcccccHHHHHHHHHHHHcccEEEEccccHHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHHHHccccccEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEcccccccccHHHcccHHHHHHHHHcccccccccccHHHHHHHHHcccccccccccEEEEcccccEEccccc
Secondary Structure Prediction (SSPRO)
ccHHHHcccccccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHccccccEEEEccccccccccccccHHHHHHHHHHHcHHHHHHHHHHHHHHHHHccEEEEEEccHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHcEEEEEEEEccEccHHHHcccccHHHHHHHHccccccccEcHHHHHHHHHHHHcHHHccccccEEEEcccHHHccccEc
Coil and Loop (DISEMBL)
maqpqqteshsrqnRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMkglkvtgsvcdvssrpqrqtLINTVSSLfngklnifvnnvgtsvlkptleynaedfsLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEwakdnirtnsvapwyirtpftepllgngkfvdevksrtpmgrlgepkevSSLVAFLCmpaasyitgqtvcidggftvngfffs
Flexible Loop (DISEMBL)
maqpqqteshsrqnrwsLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTpftepllgngkfVDEVKsrtpmgrlgepkeVSSLVAFLCMPAASYITGQTVCIDGGFTVNGFFFS
Low Complexity Region (SEG)
MAQPQQTESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNGFFFS
Disordered region (IsUnstruct)
***************WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEV**************VSSLVAFLCMPAASYITGQTVCIDGGFTVNGFFF*
Disordered Region (DISOPRED)
*******************GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNGFFF*
Disordered Region (DISEMBL)
**************RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNGFFFS
Disordered Region (DISPRO)
****************SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNGFFFS
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhoooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAQPQQTESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNGFFFS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	270	2.2.26 [Sep-21-2011]
Q9ASX2	266	Tropinone reductase homol	no	no	0.951	0.966	0.635	2e-96
P50165	268	Tropinone reductase homol	N/A	no	0.940	0.947	0.583	2e-90
P50162	273	Tropinone reductase 1 OS=	N/A	no	0.955	0.945	0.534	8e-80
P50163	260	Tropinone reductase 2 OS=	N/A	no	0.940	0.976	0.513	4e-74
P50164	260	Tropinone reductase 2 OS=	N/A	no	0.940	0.976	0.509	7e-73
P50199	256	Gluconate 5-dehydrogenase	yes	no	0.933	0.984	0.319	1e-32
Q9X248	246	3-oxoacyl-[acyl-carrier-p	no	no	0.903	0.991	0.323	3e-31
Q8VID1	279	Dehydrogenase/reductase S	yes	no	0.918	0.888	0.341	1e-30
Q8SPU8	279	Dehydrogenase/reductase S	yes	no	0.914	0.885	0.333	3e-30
Q9GKX2	260	Dehydrogenase/reductase S	yes	no	0.911	0.946	0.322	4e-30

>sp|Q9ASX2|TRNH1_ARATH Tropinone reductase homolog At1g07440 OS=Arabidopsis thaliana GN=At1g07440 PE=1 SV=1

 Score =  352 bits (903), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 164/258 (63%), Positives = 201/258 (77%), Gaps = 1/258 (0%)

Query: 12  RQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKV 71
           +  RWSL+  T LVTGGTKG+G A+VEE +  GA +HTC+R E ELNEC+   Q KG +V
Sbjct: 6   QSQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQV 65

Query: 72  TGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFE 131
           TGSVCD S RP+R+ L+ TVSS+F GKL+I +NN+G    KPTL+Y AEDFS  +STN E
Sbjct: 66  TGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLE 125

Query: 132 SAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKD 191
           SA+HL QLAHPLL+ASG  +I+ MSS  G+VSA+VG++YSATKGA+NQLA+NLACEWA D
Sbjct: 126 SAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASD 185

Query: 192 NIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI 251
            IR N+VAP  I TP  E +  + +F   V SR P+GR GEP+EVSSLVAFLCMPAASYI
Sbjct: 186 GIRANAVAPAVIATPLAEAVY-DDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYI 244

Query: 252 TGQTVCIDGGFTVNGFFF 269
           TGQT+C+DGG TVNGF +
Sbjct: 245 TGQTICVDGGLTVNGFSY 262

Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: -

>sp|P50165|TRNH_DATST Tropinone reductase homolog OS=Datura stramonium PE=2 SV=1

 Score =  332 bits (851), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 150/257 (58%), Positives = 200/257 (77%), Gaps = 3/257 (1%)

Query: 15  RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGS 74
           RWSL+GMTALVTGGT+G+G A+VEEL+  GA V+TCSR++ +L+EC+   + KG KV+G 
Sbjct: 12  RWSLRGMTALVTGGTRGIGYAIVEELANFGAEVYTCSRSQNDLDECLEKWRRKGFKVSGP 71

Query: 75  VCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAF 134
           VCDVSS  QRQTL+ +V+S FNGKLNI +NN GT++ K    + AED+S++M TNFE+++
Sbjct: 72  VCDVSSISQRQTLMESVTSSFNGKLNILINNAGTTIPKEATNFTAEDYSIIMGTNFEASY 131

Query: 135 HLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIR 194
           +LCQLAHPLL+ASG ASIV  SSA G+++  + ++Y+A+KGA+NQ+ K+LACEWAKD+IR
Sbjct: 132 NLCQLAHPLLKASGNASIVFNSSAAGVIAVPLSSIYAASKGAINQVTKSLACEWAKDSIR 191

Query: 195 TNSVAPWYIRTPFTEP---LLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI 251
            N+VAPW I TP  E    +    K ++ +  R PM R GEP EVSSLV +LC+P ASYI
Sbjct: 192 VNAVAPWIINTPIIEAACQVPSQKKNIESLIGRAPMKRAGEPSEVSSLVTYLCLPTASYI 251

Query: 252 TGQTVCIDGGFTVNGFF 268
           TGQ +C+DGG+TVNGF 
Sbjct: 252 TGQIICVDGGYTVNGFI 268

Datura stramonium (taxid: 4076)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|P50162|TRN1_DATST Tropinone reductase 1 OS=Datura stramonium GN=TR1 PE=1 SV=1

 Score =  296 bits (759), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 140/262 (53%), Positives = 190/262 (72%), Gaps = 4/262 (1%)

Query: 11  SRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLK 70
           + + RWSL+G TALVTGG+KG+G A+VEEL+ LGA V+TCSR E EL+EC+   + KGL 
Sbjct: 12  NNEGRWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLN 71

Query: 71  VTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNF 130
           V GSVCD+ SR +R  L+ TV+ +F+GKLNI VNN G  + K   ++  +D++++M TNF
Sbjct: 72  VEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNF 131

Query: 131 ESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAK 190
           E+A+HL Q+A+PLL+AS   +++ +SS  G  +    ++YSA+KGA+NQ+ K+LACEWAK
Sbjct: 132 EAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAK 191

Query: 191 DNIRTNSVAPWYIRTPFTEPLLGNG----KFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP 246
           DNIR NSVAP  I TP  E  +       + +D    +TPMGR G+P+EVS+L+AFLC P
Sbjct: 192 DNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFP 251

Query: 247 AASYITGQTVCIDGGFTVNGFF 268
           AASYITGQ +  DGGFT NG F
Sbjct: 252 AASYITGQIIWADGGFTANGGF 273

Catalyzes the stereospecific reduction of tropinone to tropine.

Datura stramonium (taxid: 4076)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 0

EC: 6

>sp|P50163|TRN2_DATST Tropinone reductase 2 OS=Datura stramonium GN=TR2 PE=1 SV=1

 Score =  278 bits (710), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 132/257 (51%), Positives = 181/257 (70%), Gaps = 3/257 (1%)

Query: 15  RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGS 74
           RW+L+G TALVTGG++G+G  +VEEL+ LGA+V+TCSR + ELN+C+   + KG KV  S
Sbjct: 4   RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEAS 63

Query: 75  VCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAF 134
           VCD+SSR +RQ L+NTV++ F+GKLNI VNN G  + K   +Y  ED+SL+MS NFE+A+
Sbjct: 64  VCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAY 123

Query: 135 HLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIR 194
           HL  LAHP L+AS   ++V +SS  G ++     VY ATKGAM+QL + LA EWAKDNIR
Sbjct: 124 HLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIR 183

Query: 195 TNSVAPWYIRTPFTEPLLGN---GKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI 251
            N V P  I T   E  + +    + ++++  R  + R+GEPKE++++VAFLC PAASY+
Sbjct: 184 VNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYV 243

Query: 252 TGQTVCIDGGFTVNGFF 268
           TGQ + +DGG   N  F
Sbjct: 244 TGQIIYVDGGLMANCGF 260

Catalyzes the stereospecific reduction of tropinone to pseudotropine.

Datura stramonium (taxid: 4076)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 3

EC: 6

>sp|P50164|TRN2_HYONI Tropinone reductase 2 OS=Hyoscyamus niger GN=TR2 PE=2 SV=1

 Score =  273 bits (699), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 131/257 (50%), Positives = 178/257 (69%), Gaps = 3/257 (1%)

Query: 15  RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGS 74
           RW+L+G TALVTGG++G+G  +VEEL+ LGA+V+TCSR + EL+EC+   + KG  V  S
Sbjct: 4   RWNLEGCTALVTGGSRGIGYGIVEELANLGASVYTCSRNQKELDECLTQWRSKGFNVEAS 63

Query: 75  VCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAF 134
           VCD+SSR +R+  + TVS+ F+GKLNI VNN G  + K   +Y  ED+S +MS NFE+A+
Sbjct: 64  VCDLSSRSEREEFMKTVSNHFHGKLNILVNNAGIVIYKEAKDYTMEDYSHIMSINFEAAY 123

Query: 135 HLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIR 194
           HL  LAHP L+AS   ++V +SS  G  +     VY ATKGAM+QL + LA EWAKDNIR
Sbjct: 124 HLSVLAHPFLKASERGNVVFISSISGASALPYEAVYGATKGAMDQLTRCLAFEWAKDNIR 183

Query: 195 TNSVAPWYIRTPFTEPLLGN---GKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI 251
            N V P  I T   E  + +    + +D++  R  + R+GEPKE++++VAFLC PAASY+
Sbjct: 184 VNGVGPGVIATSMVEMTIQDPEQKENLDKLIDRCALRRMGEPKELAAVVAFLCFPAASYV 243

Query: 252 TGQTVCIDGGFTVNGFF 268
           TGQ + +DGGF  NG F
Sbjct: 244 TGQIIYVDGGFMANGGF 260

Catalyzes the stereospecific reduction of tropinone to pseudotropine.

Hyoscyamus niger (taxid: 4079)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 3

EC: 6

>sp|P50199|GNO_GLUOX Gluconate 5-dehydrogenase OS=Gluconobacter oxydans (strain 621H) GN=gno PE=1 SV=1

 Score =  139 bits (351), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 137/257 (53%), Gaps = 5/257 (1%)

Query: 11  SRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLK 70
           S  + +SL G  ALVTG ++G+GL + + L+  GA V    R    L+      + +GLK
Sbjct: 2   SHPDLFSLSGARALVTGASRGIGLTLAKGLARYGAEVVLNGRNAESLDSAQSGFEAEGLK 61

Query: 71  VTGSVCDVSSRPQRQTLINTVSSLFN--GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMST 128
            + +V DV+    +  +I+ V+++    G ++I +NN G     P  E++ +D+  +MST
Sbjct: 62  ASTAVFDVT---DQDAVIDGVAAIERDMGPIDILINNAGIQRRAPLEEFSRKDWDDLMST 118

Query: 129 NFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEW 188
           N  + F + Q     +   G   IV + S    ++      Y+ATKGA+  L K +A +W
Sbjct: 119 NVNAVFFVGQAVARHMIPRGRGKIVNICSVQSELARPGIAPYTATKGAVKNLTKGMATDW 178

Query: 189 AKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAA 248
            +  ++ N +AP Y  T  TE L+ + +F D +  RTP GR G+ +E+     FL   A+
Sbjct: 179 GRHGLQINGLAPGYFATEMTERLVADEEFTDWLCKRTPAGRWGQVEELVGAAVFLSSRAS 238

Query: 249 SYITGQTVCIDGGFTVN 265
           S++ GQ + +DGG TV+
Sbjct: 239 SFVNGQVLMVDGGITVS 255

Involved in the non-phosphorylative, ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate. Dependent on NADP, almost inactive with NAD.

Gluconobacter oxydans (strain 621H) (taxid: 290633)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 6

EC: 9

>sp|Q9X248|FABG_THEMA 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=fabG PE=3 SV=1

 Score =  135 bits (340), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 80/247 (32%), Positives = 129/247 (52%), Gaps = 3/247 (1%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L+G   L+TG   G+G A     +  GATV     ++  L+  +   +    KV   V +
Sbjct: 3   LEGKVCLITGAASGIGKATTLLFAQEGATVIAGDISKENLDSLVKEAEGLPGKVDPYVLN 62

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           V+ R Q + ++  V   + G++++ VNN G +     +    ED+  V++ N +  F++ 
Sbjct: 63  VTDRDQIKEVVEKVVQKY-GRIDVLVNNAGITRDALLVRMKEEDWDAVINVNLKGVFNVT 121

Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNS 197
           Q+  P +      SIV +SS +GI      T Y+A+K  +  + K  A E A  NIR N+
Sbjct: 122 QMVVPYMIKQRNGSIVNVSSVVGIYGNPGQTNYAASKAGVIGMTKTWAKELAGRNIRVNA 181

Query: 198 VAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVC 257
           VAP +I TP TE L    +  +   SR P+GR G+P+EV+ ++ FL    +SY+TGQ + 
Sbjct: 182 VAPGFIETPMTEKLPEKAR--ETALSRIPLGRFGKPEEVAQVILFLASDESSYVTGQVIG 239

Query: 258 IDGGFTV 264
           IDGG  +
Sbjct: 240 IDGGLVI 246

Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis.

Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) (taxid: 243274)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 0

>sp|Q8VID1|DHRS4_RAT Dehydrogenase/reductase SDR family member 4 OS=Rattus norvegicus GN=Dhrs4 PE=2 SV=2

 Score =  133 bits (335), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/252 (34%), Positives = 130/252 (51%), Gaps = 4/252 (1%)

Query: 11  SRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLK 70
           +RQN   L    ALVT  T G+GLA+   L+  GA V   SR +  ++  +  LQ +GL 
Sbjct: 26  TRQN--PLANKVALVTASTDGIGLAIARRLAEDGAHVVISSRKQQNVDRAVATLQGEGLS 83

Query: 71  VTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTS-VLKPTLEYNAEDFSLVMSTN 129
           VTG VC V     R+ L+N    L  G ++I V+N   +      ++   E ++ V+S N
Sbjct: 84  VTGVVCHVGKAEDREKLVNMALKLHQG-IDILVSNAAVNPFFGNLMDVTEEVWNKVLSIN 142

Query: 130 FESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWA 189
             ++  + +   P +   G  S+V++SS  G V       Y+ +K A+  L KN A E A
Sbjct: 143 VTASAMMIKAVVPAMEKRGGGSVVIVSSVAGFVLFPSLGPYNVSKTALLGLTKNFAAELA 202

Query: 190 KDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAAS 249
             NIR N +AP  I+T F+  L       + +K    + RLG+P++   +V+FLC   AS
Sbjct: 203 PKNIRVNCLAPGLIKTHFSSVLWKEKAREEMIKETMQIRRLGKPEDCVGIVSFLCSEDAS 262

Query: 250 YITGQTVCIDGG 261
           YI G+TV + GG
Sbjct: 263 YINGETVVVGGG 274

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|Q8SPU8|DHRS4_BOVIN Dehydrogenase/reductase SDR family member 4 OS=Bos taurus GN=DHRS4 PE=2 SV=2

 Score =  132 bits (331), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 83/249 (33%), Positives = 130/249 (52%), Gaps = 2/249 (0%)

Query: 14  NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTG 73
            R  L    ALVT  T G+G A+   L+  GA V   SR +  ++  +  L+ +GL VTG
Sbjct: 27  RRNPLDNKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDRAVATLKGEGLSVTG 86

Query: 74  SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTL-EYNAEDFSLVMSTNFES 132
           +VC V     R+ L+ T   L  G ++I ++N   S    +L +   E +  ++  N ++
Sbjct: 87  TVCHVGKAEDRERLVATAVKLHGG-VDILISNAAVSPFFGSLMDVPEEVWDKILDVNVKA 145

Query: 133 AFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDN 192
              L +   P +   G  SIV++SS            Y+ +K A+  L KNLA E A+ N
Sbjct: 146 TALLTKAVVPEMAKRGGGSIVIVSSIAAYSPFPSLGPYNVSKTALLGLTKNLALELAESN 205

Query: 193 IRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT 252
           +R N +AP  IRT F+  L  +    + +K+   + R+G+P+E + +V+FLC   ASYIT
Sbjct: 206 VRVNCLAPGLIRTSFSRVLWEDPARQESIKATFQIKRIGKPEECAGIVSFLCSEDASYIT 265

Query: 253 GQTVCIDGG 261
           G+TV + GG
Sbjct: 266 GETVVVAGG 274

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|Q9GKX2|DHRS4_RABIT Dehydrogenase/reductase SDR family member 4 (Fragment) OS=Oryctolagus cuniculus GN=DHRS4 PE=1 SV=1

 Score =  131 bits (330), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 131/248 (52%), Gaps = 2/248 (0%)

Query: 15  RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGS 74
           R  L    A+VT  T G+GLA+   L+  GA V   SR +  ++  +  LQ +GL VTG+
Sbjct: 9   RDPLANKVAIVTASTDGIGLAIARRLAQDGAHVVISSRKQQNVDRAVAALQAEGLSVTGT 68

Query: 75  VCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTS-VLKPTLEYNAEDFSLVMSTNFESA 133
           VC V     R+ L+ T  +L  G ++I V+N   +      ++   E +  ++  N ++ 
Sbjct: 69  VCHVGKAEDRERLVATALNLHGG-IDILVSNAAVNPFFGKLMDVTEEVWDKILDINVKAM 127

Query: 134 FHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNI 193
             + +   P +   G  S+V+++S       +    Y+ +K A+  L KNLA E A  NI
Sbjct: 128 ALMTKAVVPEMEKRGGGSVVIVASIAAFNPFSGLGPYNVSKTALVGLTKNLALELAAQNI 187

Query: 194 RTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG 253
           R N +AP  I+T F++ L  +    + +  +  + RLG+P+E + +V+FLC   ASYITG
Sbjct: 188 RVNCLAPGLIKTSFSKALWEDKAQEENIIQKLRIRRLGKPEECAGIVSFLCSEDASYITG 247

Query: 254 QTVCIDGG 261
           +TV + GG
Sbjct: 248 ETVVVAGG 255

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Oryctolagus cuniculus (taxid: 9986)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	270
255558968	268	tropinone reductase, putative [Ricinus c	0.970	0.977	0.698	1e-108
158828278	263	TRL17 [Capsella rubella]	0.951	0.977	0.692	1e-104
158828210	269	TRL10 [Cleome spinosa]	0.981	0.985	0.669	1e-102
359478910	270	PREDICTED: tropinone reductase homolog A	0.974	0.974	0.657	1e-102
15227075	269	senescence-associated protein 13 [Arabid	0.951	0.955	0.693	1e-101
158828209	280	TRL11 [Cleome spinosa]	0.981	0.946	0.646	1e-101
158828303	271	tropinone reductase-like protein 16 [Ara	0.970	0.966	0.675	1e-100
158828243	262	putative tropinone reductase-14 [Boecher	0.948	0.977	0.667	1e-100
297822651	262	hypothetical protein ARALYDRAFT_481843 [	0.951	0.980	0.680	1e-100
147769646	270	hypothetical protein VITISV_035429 [Viti	0.951	0.951	0.665	1e-100

>gi|255558968|ref|XP_002520507.1| tropinone reductase, putative [Ricinus communis] gi|223540349|gb|EEF41920.1| tropinone reductase, putative [Ricinus communis]

 Score =  396 bits (1017), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 183/262 (69%), Positives = 219/262 (83%)

Query: 8   ESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK 67
           ES  + +RWSL+GMTALVTGGTKG+G A+VEEL+ LGA V+TCSR E +LNECIH  + K
Sbjct: 2   ESSRKDSRWSLEGMTALVTGGTKGIGHAIVEELAGLGAEVYTCSRNEVQLNECIHKWKAK 61

Query: 68  GLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMS 127
           G KVTGSVCDVSSR  R+ L+N +SSLFN KLNI +NNVGT++ KPT++Y AEDFS +++
Sbjct: 62  GFKVTGSVCDVSSRANREDLMNRISSLFNRKLNILINNVGTNIGKPTVKYTAEDFSYLVN 121

Query: 128 TNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACE 187
           TNFESA+HL QLA PLL+ SGA SIV MSS  G++S NVGT+Y ATK AMNQL KNLACE
Sbjct: 122 TNFESAYHLSQLAQPLLKGSGAGSIVFMSSVSGVLSVNVGTIYGATKAAMNQLTKNLACE 181

Query: 188 WAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA 247
           WAKDNIRTN VAPW+IRTP TE  L + +F + + +RTPMGR+GE +EVSSLVAFLC+PA
Sbjct: 182 WAKDNIRTNCVAPWFIRTPLTEQDLNHERFSNSIAARTPMGRVGEAEEVSSLVAFLCLPA 241

Query: 248 ASYITGQTVCIDGGFTVNGFFF 269
           ASYITGQT+C+DGG TVNGFFF
Sbjct: 242 ASYITGQTICVDGGMTVNGFFF 263

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|158828278|gb|ABW81154.1| TRL17 [Capsella rubella]

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 178/257 (69%), Positives = 212/257 (82%)

Query: 13  QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVT 72
             RWSLQGMTALVTGGTKG+G AVVEELSMLGA VHTC+R ET+L E +   Q KG +V+
Sbjct: 2   DKRWSLQGMTALVTGGTKGIGEAVVEELSMLGARVHTCARDETQLQERLREWQAKGFQVS 61

Query: 73  GSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFES 132
            S CDV+SR QR+ L+ TVSSLF GKLNI VNNVGT ++KPT EY  E++SL+M+TN ES
Sbjct: 62  TSTCDVTSREQREKLMETVSSLFQGKLNILVNNVGTFIVKPTTEYTGEEYSLIMATNLES 121

Query: 133 AFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDN 192
           AFHL QL+HPLL+ASG+ SIVLMSS  G+V ANVG++Y  TKGAMNQLA+NLACEWA+D+
Sbjct: 122 AFHLSQLSHPLLKASGSGSIVLMSSIAGLVHANVGSIYGITKGAMNQLARNLACEWARDS 181

Query: 193 IRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT 252
           IRTN+V PWYI TP    LL  G+ + EV SRTP+GR+GEP EV+SLVAFLC+PAASYIT
Sbjct: 182 IRTNAVCPWYIATPLVNDLLKEGEIIKEVVSRTPLGRVGEPNEVASLVAFLCLPAASYIT 241

Query: 253 GQTVCIDGGFTVNGFFF 269
           GQ++CIDGG TVNGF +
Sbjct: 242 GQSICIDGGLTVNGFSY 258

Source: Capsella rubella

Species: Capsella rubella

Genus: Capsella

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|158828210|gb|ABW81088.1| TRL10 [Cleome spinosa]

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 178/266 (66%), Positives = 212/266 (79%), Gaps = 1/266 (0%)

Query: 6   QTESHSRQN-RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHL 64
           + E   RQN RWSLQG TALVTGGTKGLG AVVEEL+  GA +HTC+R    LN+C+   
Sbjct: 3   KAEESIRQNSRWSLQGKTALVTGGTKGLGEAVVEELAGFGARIHTCARDGDHLNKCLREW 62

Query: 65  QMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSL 124
           Q KG +VTGSVCDVS R +R+ L+ TVSSLFNG+LNI +NNVGT++ KPT EY AEDFS 
Sbjct: 63  QAKGFQVTGSVCDVSLRTEREKLMETVSSLFNGELNILINNVGTNMTKPTTEYTAEDFSF 122

Query: 125 VMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNL 184
           +M+TNFES++HLCQL+HPLL+ASG+ SIV MSS  G+VS NVG++Y ATKGAMNQL +NL
Sbjct: 123 LMATNFESSYHLCQLSHPLLKASGSGSIVFMSSVCGVVSINVGSIYGATKGAMNQLTRNL 182

Query: 185 ACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLC 244
           ACEWA DNIR NSV PW+I TP     L + KF + V SR P+ R+GEP+EVSSLV FLC
Sbjct: 183 ACEWASDNIRANSVCPWFISTPLAYRYLEDEKFKEAVVSRNPIRRVGEPEEVSSLVTFLC 242

Query: 245 MPAASYITGQTVCIDGGFTVNGFFFS 270
           +PAASYITGQT+C+DGG TVNGF FS
Sbjct: 243 LPAASYITGQTICVDGGMTVNGFSFS 268

Source: Cleome spinosa

Species: Cleome spinosa

Genus: Cleome

Family: Cleomaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359478910|ref|XP_003632186.1| PREDICTED: tropinone reductase homolog At1g07440-like [Vitis vinifera] gi|297746015|emb|CBI16071.3| unnamed protein product [Vitis vinifera]

 Score =  376 bits (965), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 173/263 (65%), Positives = 213/263 (80%)

Query: 5   QQTESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHL 64
           Q +   S  +RWSL+GMTALVTGGTKG+G A+VEEL+ LGAT+HTCSR ETELNEC+   
Sbjct: 3   QTSGCSSGDSRWSLKGMTALVTGGTKGIGHAIVEELAGLGATIHTCSRKETELNECLKDW 62

Query: 65  QMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSL 124
           + KG  V+GSVCDVSSR QR+ L+ T+SS+FNGKLNI +NN   S+ KPT+E  AE+FS 
Sbjct: 63  KAKGFGVSGSVCDVSSRAQREKLMQTISSVFNGKLNILINNAAISIQKPTIEVTAEEFST 122

Query: 125 VMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNL 184
           +M+TNFES +HL Q+AHPLL+ASGA SIV +SS  GIV+    + YS TKGAMNQL KNL
Sbjct: 123 IMATNFESVYHLSQIAHPLLKASGAGSIVFISSVSGIVAHKNISAYSVTKGAMNQLTKNL 182

Query: 185 ACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLC 244
           ACEWAKDNIR+N+VAPWYI+TP  E +L N  F++EV +R P+ R+G+PKEVSSLVAFLC
Sbjct: 183 ACEWAKDNIRSNAVAPWYIKTPMVEQMLTNQAFLEEVINRAPLRRVGDPKEVSSLVAFLC 242

Query: 245 MPAASYITGQTVCIDGGFTVNGF 267
           +PA+SYITGQ +C+DGG TVNGF
Sbjct: 243 LPASSYITGQIICVDGGMTVNGF 265

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15227075|ref|NP_180496.1| senescence-associated protein 13 [Arabidopsis thaliana] gi|3980400|gb|AAC95203.1| putative tropinone reductase [Arabidopsis thaliana] gi|17473660|gb|AAL38287.1| putative tropinone reductase [Arabidopsis thaliana] gi|20148627|gb|AAM10204.1| putative tropinone reductase [Arabidopsis thaliana] gi|21553459|gb|AAM62552.1| putative tropinone reductase [Arabidopsis thaliana] gi|330253146|gb|AEC08240.1| senescence-associated protein 13 [Arabidopsis thaliana]

 Score =  373 bits (957), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 179/258 (69%), Positives = 206/258 (79%), Gaps = 1/258 (0%)

Query: 12  RQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKV 71
             +RWSL GMTALVTGG+KG+G AVVEEL+MLGA VHTC+R ET+L E +   Q KG +V
Sbjct: 9   ENSRWSLGGMTALVTGGSKGIGEAVVEELAMLGAKVHTCARDETQLQERLREWQAKGFQV 68

Query: 72  TGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFE 131
           T SVCDVSSR QR  L+ TVSSL+ GKLNI VNNVGTS+ KPT EY AEDFS VM+TN E
Sbjct: 69  TTSVCDVSSRDQRVKLMETVSSLYQGKLNILVNNVGTSIFKPTTEYTAEDFSFVMATNLE 128

Query: 132 SAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKD 191
           SAFHL QLAHPLL+ASG+ SIVL+SSA G+V  NVG++Y ATKGAMNQLA+NLACEWA D
Sbjct: 129 SAFHLSQLAHPLLKASGSGSIVLISSAAGVVHVNVGSIYGATKGAMNQLARNLACEWASD 188

Query: 192 NIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI 251
           NIRTNSV PWYI TP +     + +F  E    TPMGR+GE  EVS LVAFLC+P+ASYI
Sbjct: 189 NIRTNSVCPWYITTPLSNDFF-DEEFKKEAVRTTPMGRVGEANEVSPLVAFLCLPSASYI 247

Query: 252 TGQTVCIDGGFTVNGFFF 269
           TGQT+C+DGG TVNGF F
Sbjct: 248 TGQTICVDGGATVNGFSF 265

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|158828209|gb|ABW81087.1| TRL11 [Cleome spinosa]

 Score =  372 bits (956), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 179/277 (64%), Positives = 213/277 (76%), Gaps = 12/277 (4%)

Query: 6   QTESHSRQN-RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHL 64
           + E   RQN RWSLQG TALVTGGTKGLG AVVEEL+  GA +HTC+R    LN+C+   
Sbjct: 3   KAEESIRQNSRWSLQGKTALVTGGTKGLGEAVVEELAGFGARIHTCARDGDHLNKCLREW 62

Query: 65  QMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFV-----------NNVGTSVLKP 113
           Q KG +VTGSVCDVS R +R+ L+ TVSSLFNG+LNI V           NNVGT++ KP
Sbjct: 63  QAKGFQVTGSVCDVSLRTEREKLMETVSSLFNGELNILVMNRIDFVVEQINNVGTNIWKP 122

Query: 114 TLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSAT 173
           T EY AEDFS +M+TNFES++HLCQL+HPLL+ASG+ SIV MSS  G+VS NVG++Y AT
Sbjct: 123 TTEYTAEDFSFLMTTNFESSYHLCQLSHPLLKASGSGSIVFMSSVCGVVSVNVGSIYGAT 182

Query: 174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEP 233
           KGAMNQL +NLACEWA DNIR NSV PW+I TP     L + KF + V SR+P+ R+GEP
Sbjct: 183 KGAMNQLTRNLACEWASDNIRANSVCPWFISTPLVYRALEDEKFKEAVVSRSPISRVGEP 242

Query: 234 KEVSSLVAFLCMPAASYITGQTVCIDGGFTVNGFFFS 270
           +EVSSLV FLC+PAASYITGQT+C+DGG TVNGF FS
Sbjct: 243 EEVSSLVTFLCLPAASYITGQTICVDGGMTVNGFSFS 279

Source: Cleome spinosa

Species: Cleome spinosa

Genus: Cleome

Family: Cleomaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|158828303|gb|ABW81178.1| tropinone reductase-like protein 16 [Arabidopsis cebennensis]

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 177/262 (67%), Positives = 208/262 (79%)

Query: 8   ESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK 67
           ES   + RWSL GMTA+VTGG+KG+G AVVEEL+MLGA VHTC+R ET+L E +   Q K
Sbjct: 6   ESLRDKPRWSLVGMTAVVTGGSKGIGEAVVEELAMLGARVHTCARDETQLQERLREWQAK 65

Query: 68  GLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMS 127
           G +VT SVCDVSSR QR  L+ TVSSL+ GKLNI VNNVGT + KPTL++ AEDFS  M+
Sbjct: 66  GFQVTTSVCDVSSRDQRVKLMETVSSLYQGKLNILVNNVGTCIAKPTLKHTAEDFSFTMA 125

Query: 128 TNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACE 187
           TN ESAFHL QLAHPLL+ASG+ SIVL+SS  G+V  N  ++Y  +KGAMNQL +NLACE
Sbjct: 126 TNLESAFHLSQLAHPLLKASGSGSIVLISSVSGVVHVNGASIYGVSKGAMNQLGRNLACE 185

Query: 188 WAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA 247
           WA DNIRTNSV PW+I TP    +L N +F  EV+SR PMGR+GE  EVSSLVAFLC+PA
Sbjct: 186 WASDNIRTNSVCPWFIETPLVTEVLSNEEFRKEVESRPPMGRVGEVNEVSSLVAFLCLPA 245

Query: 248 ASYITGQTVCIDGGFTVNGFFF 269
           ASYITGQT+C+DGGFTVNGF F
Sbjct: 246 ASYITGQTICVDGGFTVNGFSF 267

Source: Arabidopsis cebennensis

Species: Arabidopsis cebennensis

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|158828243|gb|ABW81120.1| putative tropinone reductase-14 [Boechera divaricarpa]

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 171/256 (66%), Positives = 204/256 (79%)

Query: 14  NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTG 73
            RWSLQGMTALVTGGTKG+G AVVEELSMLGA VHTC+R ET+L E +   Q KG +V+ 
Sbjct: 3   KRWSLQGMTALVTGGTKGIGEAVVEELSMLGARVHTCARDETQLQERLREWQAKGFQVST 62

Query: 74  SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESA 133
           S+CDVSSR QR+ L+ TV++LF GKLNI VNN GT + KPT E+ AE++S +M+TN ESA
Sbjct: 63  SICDVSSREQREKLMETVAALFQGKLNILVNNAGTFIFKPTTEFTAEEYSFIMATNLESA 122

Query: 134 FHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNI 193
           FHL QLAHPLL+ASG+  IVLMSS  G+V  NVG++Y ATKGAMNQLA+NLACEWA DNI
Sbjct: 123 FHLSQLAHPLLKASGSGRIVLMSSVAGVVHVNVGSIYGATKGAMNQLARNLACEWASDNI 182

Query: 194 RTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG 253
           RTN++ PW I TP    LL   +   E   RTP+GR+GEP EV+SLVAFLC+PAASYITG
Sbjct: 183 RTNAICPWLIVTPLVNDLLNEEEVKKEAVRRTPLGRVGEPNEVASLVAFLCLPAASYITG 242

Query: 254 QTVCIDGGFTVNGFFF 269
           QT+C+DGG TVNGF +
Sbjct: 243 QTICVDGGLTVNGFSY 258

Source: Boechera divaricarpa

Species: Boechera divaricarpa

Genus: Boechera

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297822651|ref|XP_002879208.1| hypothetical protein ARALYDRAFT_481843 [Arabidopsis lyrata subsp. lyrata] gi|297325047|gb|EFH55467.1| hypothetical protein ARALYDRAFT_481843 [Arabidopsis lyrata subsp. lyrata]

 Score =  370 bits (951), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 175/257 (68%), Positives = 204/257 (79%)

Query: 13  QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVT 72
             RWSLQGMTALVTGGTKG+G AVVEELSMLGA VHTC+R ET+L E +   Q KG +VT
Sbjct: 2   DKRWSLQGMTALVTGGTKGIGEAVVEELSMLGARVHTCARDETQLQERLREWQGKGFQVT 61

Query: 73  GSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFES 132
            SVCDVS R QR+ LI TVSSLF GKLNI VNN GT +LKPT EY AE+FS +M+TN ES
Sbjct: 62  TSVCDVSLRDQREKLIETVSSLFQGKLNILVNNAGTFILKPTTEYTAEEFSFIMATNLES 121

Query: 133 AFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDN 192
           AFH+ QLAHPLL+ASG+ SIV MSS  G+V  +VG++Y ATKGAMNQLA+NLACEWA DN
Sbjct: 122 AFHISQLAHPLLKASGSGSIVFMSSIAGVVHVSVGSIYGATKGAMNQLARNLACEWASDN 181

Query: 193 IRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT 252
           IRTN++ P  I+TP    LL + +   E + RTPMGR+GE  EVS LVAFLC+PAASYIT
Sbjct: 182 IRTNAICPGVIKTPLISDLLSDEEIKKEAEQRTPMGRVGEANEVSPLVAFLCLPAASYIT 241

Query: 253 GQTVCIDGGFTVNGFFF 269
           GQT+C+DGG TVNGF +
Sbjct: 242 GQTICVDGGLTVNGFSY 258

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147769646|emb|CAN63543.1| hypothetical protein VITISV_035429 [Vitis vinifera]

 Score =  370 bits (951), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 171/257 (66%), Positives = 209/257 (81%)

Query: 11  SRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLK 70
           S  +RWSL+GMTALVTGGTKG+G A+VEEL+ LGA +HTCSR ETELNEC+   + KG  
Sbjct: 9   SGDSRWSLKGMTALVTGGTKGIGHAIVEELAGLGAAIHTCSRKETELNECLKDWKAKGFG 68

Query: 71  VTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNF 130
           V+GSVCDVSSR QR+ L+ TVSS+FNGKLNI VNN    + KPT+E  AE+FS +M+ NF
Sbjct: 69  VSGSVCDVSSRAQREKLMETVSSVFNGKLNILVNNAAIVIQKPTVEVTAEEFSTIMAINF 128

Query: 131 ESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAK 190
           ES +HL QLAHPLL+ASGA SIV +SS  G+VS    + YSATKGAMNQL KNLACEWA+
Sbjct: 129 ESVYHLSQLAHPLLKASGAGSIVFISSVAGVVSLKYLSAYSATKGAMNQLTKNLACEWAE 188

Query: 191 DNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY 250
           DNIR+N+VAPWYI+TP  + +L N  F++ V +R P+ R+G+PKEVSSLVAFLC+PA+SY
Sbjct: 189 DNIRSNAVAPWYIKTPMVDQMLSNKTFLEXVINRAPLRRVGDPKEVSSLVAFLCLPASSY 248

Query: 251 ITGQTVCIDGGFTVNGF 267
           ITGQT+C+DGG TVNGF
Sbjct: 249 ITGQTICVDGGVTVNGF 265

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	270
TAIR|locus:2043177	269	SAG13 "senescence-associated g	0.944	0.947	0.699	5.5e-93
TAIR|locus:2043167	271	AT2G29360 [Arabidopsis thalian	0.970	0.966	0.664	8.1e-92
TAIR|locus:2043052	262	AT2G29290 [Arabidopsis thalian	0.944	0.973	0.674	7.3e-91
TAIR|locus:2043152	268	AT2G29370 [Arabidopsis thalian	0.962	0.970	0.657	3.6e-89
TAIR|locus:2152815	264	AT5G06060 [Arabidopsis thalian	0.948	0.969	0.644	3.6e-89
TAIR|locus:2043037	268	AT2G29150 [Arabidopsis thalian	0.966	0.973	0.641	3.2e-88
TAIR|locus:2025072	266	AT1G07440 [Arabidopsis thalian	0.951	0.966	0.635	7.7e-87
TAIR|locus:2043087	322	AT2G29260 [Arabidopsis thalian	0.977	0.819	0.609	2.6e-86
TAIR|locus:2025057	260	AT1G07450 [Arabidopsis thalian	0.944	0.980	0.636	8e-85
TAIR|locus:2042992	260	TRI "tropinone reductase" [Ara	0.944	0.980	0.607	3.1e-83

TAIR|locus:2043177 SAG13 "senescence-associated gene 13" [Arabidopsis thaliana (taxid:3702)]

 Score = 926 (331.0 bits), Expect = 5.5e-93, P = 5.5e-93
 Identities = 179/256 (69%), Positives = 205/256 (80%)

Query:    14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTG 73
             +RWSL GMTALVTGG+KG+G AVVEEL+MLGA VHTC+R ET+L E +   Q KG +VT 
Sbjct:    11 SRWSLGGMTALVTGGSKGIGEAVVEELAMLGAKVHTCARDETQLQERLREWQAKGFQVTT 70

Query:    74 SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESA 133
             SVCDVSSR QR  L+ TVSSL+ GKLNI VNNVGTS+ KPT EY AEDFS VM+TN ESA
Sbjct:    71 SVCDVSSRDQRVKLMETVSSLYQGKLNILVNNVGTSIFKPTTEYTAEDFSFVMATNLESA 130

Query:   134 FHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNI 193
             FHL QLAHPLL+ASG+ SIVL+SSA G+V  NVG++Y ATKGAMNQLA+NLACEWA DNI
Sbjct:   131 FHLSQLAHPLLKASGSGSIVLISSAAGVVHVNVGSIYGATKGAMNQLARNLACEWASDNI 190

Query:   194 RTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG 253
             RTNSV PWYI TP +       +F  E    TPMGR+GE  EVS LVAFLC+P+ASYITG
Sbjct:   191 RTNSVCPWYITTPLSNDFFDE-EFKKEAVRTTPMGRVGEANEVSPLVAFLCLPSASYITG 249

Query:   254 QTVCIDGGFTVNGFFF 269
             QT+C+DGG TVNGF F
Sbjct:   250 QTICVDGGATVNGFSF 265

GO:0000166 "nucleotide binding" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0007568 "aging" evidence=IEP;RCA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=TAS

GO:0002213 "defense response to insect" evidence=IEP

TAIR|locus:2043167 AT2G29360 [Arabidopsis thaliana (taxid:3702)]

 Score = 915 (327.2 bits), Expect = 8.1e-92, P = 8.1e-92
 Identities = 174/262 (66%), Positives = 208/262 (79%)

Query:     8 ESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK 67
             ES   + RWSL GMTALVTGG+KG+G AVVEEL+ LGA +HTC+R ET+L E +   Q K
Sbjct:     6 ESLRDKPRWSLVGMTALVTGGSKGIGEAVVEELATLGARIHTCARDETQLQESLRKWQAK 65

Query:    68 GLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMS 127
             G +VT SVCDVSSR +R+ L+ TVS++F GKLNI VNNVGT ++KPTL++ AEDFS  M+
Sbjct:    66 GFQVTTSVCDVSSRDKREKLMETVSTIFEGKLNILVNNVGTCIVKPTLQHTAEDFSFTMA 125

Query:   128 TNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACE 187
             TN ESAFHL QLAHPLL+ASG+ SIVL+SS  G+V  N  ++Y  +KGAMNQL +NLACE
Sbjct:   126 TNLESAFHLSQLAHPLLKASGSGSIVLISSVSGVVHVNGASIYGVSKGAMNQLGRNLACE 185

Query:   188 WAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA 247
             WA DNIRTNSV PW+I TP     L N +F  EV+SR PMGR+GE  EVSSLVAFLC+PA
Sbjct:   186 WASDNIRTNSVCPWFIETPLVTESLSNEEFRKEVESRPPMGRVGEVNEVSSLVAFLCLPA 245

Query:   248 ASYITGQTVCIDGGFTVNGFFF 269
             ASYITGQT+C+DGGFTVNGF F
Sbjct:   246 ASYITGQTICVDGGFTVNGFSF 267

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0015979 "photosynthesis" evidence=RCA

GO:0016556 "mRNA modification" evidence=RCA

TAIR|locus:2043052 AT2G29290 [Arabidopsis thaliana (taxid:3702)]

 Score = 906 (324.0 bits), Expect = 7.3e-91, P = 7.3e-91
 Identities = 172/255 (67%), Positives = 202/255 (79%)

Query:    15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGS 74
             RWSLQGM ALVTGGTKG+G AVVEELS+LGA VHTC+R ET+L E +   Q KG +VT S
Sbjct:     4 RWSLQGMNALVTGGTKGIGEAVVEELSILGARVHTCARDETQLQERLREWQEKGFQVTTS 63

Query:    75 VCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAF 134
             +CDVS R QR+ L+ TVSSLF GKLNI VNNVGT +LKPT EY AE+FS +M+TN +SAF
Sbjct:    64 ICDVSLREQREKLMETVSSLFQGKLNILVNNVGTLMLKPTTEYTAEEFSFLMATNLDSAF 123

Query:   135 HLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIR 194
             H+ QLAHPLL+ASG+ SIVLMSS  G+V   VG++Y ATKGAMNQLA+NLACEWA DNIR
Sbjct:   124 HISQLAHPLLKASGSGSIVLMSSIAGVVHVGVGSIYGATKGAMNQLARNLACEWASDNIR 183

Query:   195 TNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ 254
             TN++ PW I TP    LL   +   E + RTPMGR+GE  EVS LVAFLC+PAASYITGQ
Sbjct:   184 TNAICPWLITTPLISDLLSVEEMKKEAEERTPMGRVGEANEVSPLVAFLCLPAASYITGQ 243

Query:   255 TVCIDGGFTVNGFFF 269
              +C+DGG TVNGF +
Sbjct:   244 VICVDGGLTVNGFSY 258

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2043152 AT2G29370 [Arabidopsis thaliana (taxid:3702)]

 Score = 890 (318.4 bits), Expect = 3.6e-89, P = 3.6e-89
 Identities = 171/260 (65%), Positives = 207/260 (79%)

Query:     8 ESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK 67
             ES   + +WSL+GMTALVTGG+KGLG AVVEEL+MLGA VHTC+R ET+L E +   Q K
Sbjct:     6 ESLRDKPKWSLEGMTALVTGGSKGLGKAVVEELAMLGARVHTCARDETQLQESLREWQAK 65

Query:    68 GLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMS 127
             GL+VT SVCDVSSR QR+ L+ TVSSLF GKL+I V NVG  VLKPT E  AE+FS +++
Sbjct:    66 GLQVTTSVCDVSSRDQREKLMETVSSLFQGKLSILVPNVGIGVLKPTTECTAEEFSFIIA 125

Query:   128 TNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACE 187
             TN ES FH  QLAHPLL+ASG+ +IVLMSS  G+V+    ++Y ATKGAMNQLA+NLACE
Sbjct:   126 TNLESTFHFSQLAHPLLKASGSGNIVLMSSVAGVVNLGNTSIYGATKGAMNQLARNLACE 185

Query:   188 WAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA 247
             WA DNIR NSV PW+I TP T+  LG+    ++V+S TP+ R+GE  EVSSLVAFLC+PA
Sbjct:   186 WASDNIRANSVCPWFITTPSTKDFLGDKDVKEKVESVTPLRRVGEANEVSSLVAFLCLPA 245

Query:   248 ASYITGQTVCIDGGFTVNGF 267
             ASYITGQT+C+DGGFT+NGF
Sbjct:   246 ASYITGQTICVDGGFTINGF 265

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2152815 AT5G06060 [Arabidopsis thaliana (taxid:3702)]

 Score = 890 (318.4 bits), Expect = 3.6e-89, P = 3.6e-89
 Identities = 165/256 (64%), Positives = 205/256 (80%)

Query:    15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGS 74
             RWSL G TALVTGGT+G+G AVVEEL+  GA VHTCSR + ELN C++  +  GL V+GS
Sbjct:     6 RWSLAGKTALVTGGTRGIGRAVVEELAKFGAKVHTCSRNQEELNACLNDWKANGLVVSGS 65

Query:    75 VCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAF 134
             VCD S R QR+ LI   SS F+GKLNI +NNVGT+V KPT+EY++E+++ +MSTN ESAF
Sbjct:    66 VCDASVRDQREKLIQEASSAFSGKLNILINNVGTNVRKPTVEYSSEEYAKIMSTNLESAF 125

Query:   135 HLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIR 194
             HL Q+AHPLL+ASG  SIV +SS  G+V  + G++Y ATKGA+NQL +NLACEWA DNIR
Sbjct:   126 HLSQIAHPLLKASGVGSIVFISSVAGLVHLSSGSIYGATKGALNQLTRNLACEWASDNIR 185

Query:   195 TNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ 254
             TN VAPWYI+T   E LL   +FV+ V SRTP+GR+GEP+EVSSLVAFLC+PA+SYITGQ
Sbjct:   186 TNCVAPWYIKTSLVETLLEKKEFVEAVVSRTPLGRVGEPEEVSSLVAFLCLPASSYITGQ 245

Query:   255 TVCIDGGFTVNGFFFS 270
              + +DGGFTVNGF ++
Sbjct:   246 VISVDGGFTVNGFSYA 261

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0005829 "cytosol" evidence=IDA

TAIR|locus:2043037 AT2G29150 [Arabidopsis thaliana (taxid:3702)]

 Score = 881 (315.2 bits), Expect = 3.2e-88, P = 3.2e-88
 Identities = 168/262 (64%), Positives = 204/262 (77%)

Query:     8 ESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK 67
             E+   ++RWSL+GMTALVTGG+KGLG AVVEEL+MLGA VHTC+R ET+L E +   Q K
Sbjct:     6 ENSRDKSRWSLEGMTALVTGGSKGLGEAVVEELAMLGARVHTCARDETQLQERLREWQAK 65

Query:    68 GLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMS 127
             G +VT SVCDVSSR QR+ L+ TVSS+F GKLNI VNN GT ++KP+ EY AED+S +M+
Sbjct:    66 GFEVTTSVCDVSSREQREKLMETVSSVFQGKLNILVNNAGTGIIKPSTEYTAEDYSFLMA 125

Query:   128 TNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACE 187
             TN ESAFHL Q+AHPLL+ASG+ SIV MSS  G+V     ++Y A+KGAMNQL ++LACE
Sbjct:   126 TNLESAFHLSQIAHPLLKASGSGSIVFMSSVAGLVHTGA-SIYGASKGAMNQLGRSLACE 184

Query:   188 WAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA 247
             WA DNIR NSV PW I TP T  +  + K    V+ +TPMGR+GE  EVSSLVAFLC PA
Sbjct:   185 WASDNIRVNSVCPWVITTPLTSFIFSDEKLRKAVEDKTPMGRVGEANEVSSLVAFLCFPA 244

Query:   248 ASYITGQTVCIDGGFTVNGFFF 269
             ASYITGQT+C+DGG +VNGF F
Sbjct:   245 ASYITGQTICVDGGASVNGFSF 266

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2025072 AT1G07440 [Arabidopsis thaliana (taxid:3702)]

 Score = 868 (310.6 bits), Expect = 7.7e-87, P = 7.7e-87
 Identities = 164/258 (63%), Positives = 201/258 (77%)

Query:    12 RQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKV 71
             +  RWSL+  T LVTGGTKG+G A+VEE +  GA +HTC+R E ELNEC+   Q KG +V
Sbjct:     6 QSQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQV 65

Query:    72 TGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFE 131
             TGSVCD S RP+R+ L+ TVSS+F GKL+I +NN+G    KPTL+Y AEDFS  +STN E
Sbjct:    66 TGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLE 125

Query:   132 SAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKD 191
             SA+HL QLAHPLL+ASG  +I+ MSS  G+VSA+VG++YSATKGA+NQLA+NLACEWA D
Sbjct:   126 SAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASD 185

Query:   192 NIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI 251
              IR N+VAP  I TP  E +  + +F   V SR P+GR GEP+EVSSLVAFLCMPAASYI
Sbjct:   186 GIRANAVAPAVIATPLAEAVYDD-EFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYI 244

Query:   252 TGQTVCIDGGFTVNGFFF 269
             TGQT+C+DGG TVNGF +
Sbjct:   245 TGQTICVDGGLTVNGFSY 262

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0080167 "response to karrikin" evidence=IEP

GO:0000023 "maltose metabolic process" evidence=RCA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0019252 "starch biosynthetic process" evidence=RCA

GO:0043085 "positive regulation of catalytic activity" evidence=RCA

TAIR|locus:2043087 AT2G29260 [Arabidopsis thaliana (taxid:3702)]

 Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
 Identities = 161/264 (60%), Positives = 206/264 (78%)

Query:     5 QQTESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHL 64
             Q + + + + RWSL GM+ALVTGGT+G+G A+VEEL+ LGA VHTC+R E EL  C+   
Sbjct:    55 QSSIAITSKERWSLNGMSALVTGGTRGIGRAIVEELAGLGAEVHTCARNEYELENCLSDW 114

Query:    65 QMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSL 124
                G +V GSVCDVS R QR+ L+ TVSS+F GKL+I VNNVGT++ KP +E+ A +FS 
Sbjct:   115 NRSGFRVAGSVCDVSDRSQREALMETVSSVFEGKLHILVNNVGTNIRKPMVEFTAGEFST 174

Query:   125 VMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNL 184
             +MSTNFES FHLCQLA+PLLR S A S+V +SS  G VS    +V S+TKGA+NQL ++L
Sbjct:   175 LMSTNFESVFHLCQLAYPLLRESKAGSVVFISSVSGFVSLKNMSVQSSTKGAINQLTRSL 234

Query:   185 ACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLC 244
             ACEWAKDNIR N+VAPWYI+T   E +L N ++++EV S TP+GRLGEP+EVSS VAFLC
Sbjct:   235 ACEWAKDNIRINAVAPWYIKTSMVEQVLSNKEYLEEVYSVTPLGRLGEPREVSSAVAFLC 294

Query:   245 MPAASYITGQTVCIDGGFTVNGFF 268
             +PA+SYITGQ +C+DGG ++NGFF
Sbjct:   295 LPASSYITGQILCVDGGMSINGFF 318

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2025057 AT1G07450 [Arabidopsis thaliana (taxid:3702)]

 Score = 849 (303.9 bits), Expect = 8.0e-85, P = 8.0e-85
 Identities = 163/256 (63%), Positives = 196/256 (76%)

Query:    14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTG 73
             NRWSLQGMTALVTGG+KG+G A+VEEL   GA VH C   ET LNEC+     KG +V+G
Sbjct:     4 NRWSLQGMTALVTGGSKGIGYAIVEELVGFGARVHICDIDETLLNECLSGWHAKGFEVSG 63

Query:    74 SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESA 133
             S+CDVSSRPQR  L+ TVSSLF  KLNI +NNVG  +LKPTLE  AEDFS +M+TN ESA
Sbjct:    64 SICDVSSRPQRVQLMQTVSSLFGAKLNILINNVGKYILKPTLESTAEDFSSLMATNLESA 123

Query:   134 FHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNI 193
             +++ QLAHPLL+ASG  +IV +SS  G+VS    T+Y  TKGA+NQLA++LACEWA DNI
Sbjct:   124 YYISQLAHPLLKASGNGNIVFISSVTGVVSGT-STIYGVTKGALNQLARDLACEWASDNI 182

Query:   194 RTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG 253
             R NSVAPW   T   +  L +  F + + SRTP+GR  EP+EV+SLV FLC+PAASYITG
Sbjct:   183 RANSVAPWVTATSLVQKYLEDEIFAEAMFSRTPLGRACEPREVASLVTFLCLPAASYITG 242

Query:   254 QTVCIDGGFTVNGFFF 269
             QT+CIDGGFTVNGF +
Sbjct:   243 QTICIDGGFTVNGFSY 258

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2042992 TRI "tropinone reductase" [Arabidopsis thaliana (taxid:3702)]

 Score = 834 (298.6 bits), Expect = 3.1e-83, P = 3.1e-83
 Identities = 155/255 (60%), Positives = 200/255 (78%)

Query:    15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGS 74
             RWSLQG+TALVTGG  G+G A+VEEL+  GA +H C  ++T LN+ +   + KG +V+GS
Sbjct:     4 RWSLQGLTALVTGGASGIGHAIVEELAGFGAKIHVCDISKTLLNQSLSEWEKKGFQVSGS 63

Query:    75 VCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAF 134
             VCD S+R +R+TL+ TV+++F+GKLNI VNNVGT   KPT+EY AEDFS ++STN ESA+
Sbjct:    64 VCDASNRLERETLMQTVTTIFDGKLNILVNNVGTIRTKPTIEYEAEDFSFLISTNLESAY 123

Query:   135 HLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIR 194
             HL QL+HPLL+ASG   I  +SSA GIVS +  ++Y  TKGA+NQLA+NLACEWAKD IR
Sbjct:   124 HLSQLSHPLLKASGNGIITFISSAAGIVSFDAASIYGLTKGALNQLARNLACEWAKDGIR 183

Query:   195 TNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ 254
              N+VAP +I T   +P L +  F + + SRTP+GR GEP+EV+SLVAFLC+PAASYITGQ
Sbjct:   184 ANAVAPNFITTALAKPFLEDAGFNEILSSRTPLGRAGEPREVASLVAFLCLPAASYITGQ 243

Query:   255 TVCIDGGFTVNGFFF 269
             T+C+DGG TVNGF +
Sbjct:   244 TICVDGGLTVNGFSY 258

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0000041 "transition metal ion transport" evidence=RCA

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O67610	FABG_AQUAE	1, ., 1, ., 1, ., 1, 0, 0	0.3319	0.8925	0.9717	yes	no
Q8WNV7	DHRS4_PIG	1, ., 1, ., 1, ., 1, 8, 4	0.3293	0.9111	0.8817	yes	no
P94681	TSAC_COMTE	1, ., 2, ., 1, ., 6, 2	0.3203	0.9	0.9642	yes	no
P50842	KDUD_BACSU	1, ., 1, ., 1, ., 1, 2, 7	0.3067	0.9111	0.9685	yes	no
Q9KQH7	FABG_VIBCH	1, ., 1, ., 1, ., 1, 0, 0	0.3117	0.8851	0.9795	yes	no
Q9GKX2	DHRS4_RABIT	1, ., 1, ., 1, ., 1, 8, 4	0.3225	0.9111	0.9461	yes	no
P50162	TRN1_DATST	1, ., 1, ., 1, ., 2, 0, 6	0.5343	0.9555	0.9450	N/A	no
P50163	TRN2_DATST	1, ., 1, ., 1, ., 2, 3, 6	0.5136	0.9407	0.9769	N/A	no
P50164	TRN2_HYONI	1, ., 1, ., 1, ., 2, 3, 6	0.5097	0.9407	0.9769	N/A	no
P50165	TRNH_DATST	1, ., 1, ., 1, ., -	0.5836	0.9407	0.9477	N/A	no
Q99LB2	DHRS4_MOUSE	1, ., 1, ., 1, ., 1, 8, 4	0.3306	0.9111	0.8817	yes	no
Q5RCF8	DHRS4_PONAB	1, ., 1, ., 1, ., 1, 8, 4	0.3293	0.9148	0.8884	yes	no
Q9PKF7	FABG_CHLMU	1, ., 1, ., 1, ., 1, 0, 0	0.3140	0.8740	0.9516	yes	no
Q937L4	CPNA_COMTE	1, ., 1, ., 1, ., 1, 6, 3	0.3181	0.8925	0.964	yes	no
P50199	GNO_GLUOX	1, ., 1, ., 1, ., 6, 9	0.3190	0.9333	0.9843	yes	no
Q8SPU8	DHRS4_BOVIN	1, ., 1, ., 1, ., 1, 8, 4	0.3333	0.9148	0.8853	yes	no
P0A2D1	UCPA_SALTY	1, ., -, ., -, ., -	0.3070	0.9074	0.9315	yes	no
Q8VID1	DHRS4_RAT	1, ., 1, ., 1, ., 1, 8, 4	0.3412	0.9185	0.8888	yes	no
P43713	FABG_HAEIN	1, ., 1, ., 1, ., 1, 0, 0	0.3453	0.8703	0.9710	yes	no
Q9BTZ2	DHRS4_HUMAN	1, ., 1, ., 1, ., 1, 8, 4	0.3253	0.9148	0.8884	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.963
3rd Layer	1.3.1.58	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	SAG13	SAG13; alcohol dehydrogenase/ oxidoreductase; senescence-associated gene SAG13 encoding a short-chain alcohol dehydrogenase (269 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	AT5G06060	tropinone reductase, putative / tropine dehydrogenase, putative; tropinone reductase, putative [...] (264 aa)			•		•		•	•	0.925
	AT2G29320	tropinone reductase, putative / tropine dehydrogenase, putative; tropinone reductase, putative [...] (269 aa)			•		•			•	0.924
	AT2G29310	tropinone reductase, putative / tropine dehydrogenase, putative; tropinone reductase, putative [...] (262 aa)			•		•			•	0.924
	AT1G07450	tropinone reductase, putative / tropine dehydrogenase, putative; tropinone reductase, putative [...] (260 aa)			•		•			•	0.924
	AT2G29360	tropinone reductase, putative / tropine dehydrogenase, putative; tropinone reductase, putative [...] (271 aa)			•		•			•	0.924
	SAG12	SAG12 (SENESCENCE-ASSOCIATED GENE 12); cysteine-type peptidase; Senescence-associated gene 12 ( [...] (346 aa)							•		0.897
	AT2G43570	chitinase, putative; chitinase, putative; FUNCTIONS IN- chitin binding, chitinase activity; INV [...] (277 aa)				•			•		0.804
	ATTI1	ATTI1; serine-type endopeptidase inhibitor; Member of the defensin-like (DEFL) family. Encodes [...] (89 aa)				•			•		0.763
	AT5G38900	DSBA oxidoreductase family protein; DSBA oxidoreductase family protein; FUNCTIONS IN- protein d [...] (217 aa)				•					0.683
	SAG101	SAG101 (SENESCENCE-ASSOCIATED GENE 101); carboxylesterase/ triacylglycerol lipase; encodes an a [...] (537 aa)							•		0.657

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	270
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	1e-141
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	1e-102
cd05233	234	cd05233, SDR_c, classical (c) SDRs	2e-69
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-68
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	7e-63
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	1e-62
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-61
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	9e-61
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-58
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	2e-55
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	2e-55
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-55
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-54
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	6e-54
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	1e-53
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	3e-53
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	2e-50
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	2e-49
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	1e-47
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	4e-47
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	5e-47
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	1e-45
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	2e-45
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	3e-45
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	4e-45
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	7e-45
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	9e-45
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	1e-44
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	2e-44
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	2e-43
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	2e-43
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	2e-42
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	3e-42
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	3e-41
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-41
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	2e-40
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	2e-40
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	4e-40
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	2e-39
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	2e-39
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	3e-39
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	5e-39
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	6e-39
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	8e-39
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	9e-39
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	1e-38
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	9e-38
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	1e-37
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	1e-37
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	2e-37
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	5e-37
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	8e-37
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	1e-36
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	2e-36
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	4e-36
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	5e-36
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	6e-36
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	1e-35
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-34
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	4e-34
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	4e-34
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	6e-34
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	7e-34
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	7e-34
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	8e-34
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	1e-33
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	2e-33
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	3e-33
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	4e-33
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	9e-33
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	2e-32
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	3e-32
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	3e-32
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	6e-32
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	1e-31
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	2e-31
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	2e-31
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	3e-31
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	4e-31
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	4e-31
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	5e-31
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	1e-30
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	1e-30
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	1e-30
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	1e-30
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	2e-30
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	2e-30
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	2e-30
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	2e-30
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	5e-30
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	1e-29
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	4e-29
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-29
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	5e-29
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	7e-29
cd05361	242	cd05361, haloalcohol_DH_SDR_c-like, haloalcohol de	7e-29
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	9e-29
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	1e-28
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	2e-28
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	4e-28
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	8e-28
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	8e-28
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	9e-28
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	1e-27
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	1e-27
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-27
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	5e-27
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	9e-27
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	1e-26
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	2e-26
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	3e-26
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	3e-26
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	4e-26
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	5e-26
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	1e-25
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	2e-25
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	2e-25
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	2e-25
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	2e-25
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	3e-25
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	4e-25
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	4e-25
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	5e-25
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	9e-25
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	1e-24
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	1e-24
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	2e-24
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	2e-24
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	3e-24
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	3e-24
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	4e-24
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	5e-24
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	8e-24
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	8e-24
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	8e-24
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-23
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	1e-23
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	2e-23
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	4e-23
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	5e-23
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	5e-23
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	8e-23
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	1e-22
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	2e-22
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	2e-22
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	2e-22
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	2e-22
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	2e-22
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	2e-21
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	3e-21
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	3e-21
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	3e-21
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	5e-21
TIGR03325	262	TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-	1e-20
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	1e-20
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	4e-20
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	5e-20
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	5e-20
PRK07041	230	PRK07041, PRK07041, short chain dehydrogenase; Pro	9e-20
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	3e-19
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-19
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-18
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	1e-18
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	2e-18
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	2e-18
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	2e-18
PRK08416	260	PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro	2e-18
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	2e-18
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	3e-18
cd05372	250	cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP)	5e-18
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	9e-18
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	2e-17
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-16
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	2e-16
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	2e-16
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	3e-16
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	3e-16
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	6e-16
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	7e-16
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	9e-16
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-15
PRK07985	294	PRK07985, PRK07985, oxidoreductase; Provisional	2e-15
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	3e-15
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	7e-15
COG0623	259	COG0623, FabI, Enoyl-[acyl-carrier-protein]	1e-14
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	1e-14
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	1e-14
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	2e-14
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	2e-14
PRK06940	275	PRK06940, PRK06940, short chain dehydrogenase; Pro	2e-14
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	3e-14
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	6e-14
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	1e-13
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	1e-13
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	1e-13
PRK07370	258	PRK07370, PRK07370, enoyl-(acyl carrier protein) r	1e-13
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	2e-13
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	3e-13
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	3e-13
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	3e-13
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	5e-13
PRK07533	258	PRK07533, PRK07533, enoyl-(acyl carrier protein) r	9e-13
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	1e-12
TIGR02685	267	TIGR02685, pter_reduc_Leis, pteridine reductase	1e-12
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	4e-12
cd05334	221	cd05334, DHPR_SDR_c_like, dihydropteridine reducta	2e-11
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	6e-11
PRK12428	241	PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydro	8e-11
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	1e-10
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	2e-10
PRK06483	236	PRK06483, PRK06483, dihydromonapterin reductase; P	2e-10
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	3e-10
cd11731	198	cd11731, Lin1944_like_SDR_c, Lin1944 and related p	5e-10
cd02266	186	cd02266, SDR, Short-chain dehydrogenases/reductase	8e-10
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	2e-09
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	3e-09
pfam08659	181	pfam08659, KR, KR domain	3e-09
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	6e-09
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	6e-09
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	7e-09
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	7e-09
PRK06300	299	PRK06300, PRK06300, enoyl-(acyl carrier protein) r	9e-09
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	2e-08
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	2e-08
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	3e-08
PRK09134	258	PRK09134, PRK09134, short chain dehydrogenase; Pro	5e-08
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	5e-08
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	5e-08
PRK08690	261	PRK08690, PRK08690, enoyl-(acyl carrier protein) r	9e-08
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	1e-07
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	2e-07
PRK09009	235	PRK09009, PRK09009, C factor cell-cell signaling p	4e-07
cd11730	206	cd11730, Tthb094_like_SDR_c, Tthb094 and related p	4e-07
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	4e-07
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	5e-07
PLN02730	303	PLN02730, PLN02730, enoyl-[acyl-carrier-protein] r	7e-07
PRK08594	257	PRK08594, PRK08594, enoyl-(acyl carrier protein) r	7e-07
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	2e-06
PLN02780	320	PLN02780, PLN02780, ketoreductase/ oxidoreductase	3e-06
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	3e-06
PRK06079	252	PRK06079, PRK06079, enoyl-(acyl carrier protein) r	4e-06
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	8e-06
PRK08177	225	PRK08177, PRK08177, short chain dehydrogenase; Pro	1e-05
PRK05884	223	PRK05884, PRK05884, short chain dehydrogenase; Pro	2e-05
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	2e-05
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	3e-05
PRK06101	240	PRK06101, PRK06101, short chain dehydrogenase; Pro	8e-05
PRK06997	260	PRK06997, PRK06997, enoyl-(acyl carrier protein) r	8e-05
PRK07984	262	PRK07984, PRK07984, enoyl-(acyl carrier protein) r	9e-05
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	1e-04
PRK06953	222	PRK06953, PRK06953, short chain dehydrogenase; Pro	2e-04
PRK05854	313	PRK05854, PRK05854, short chain dehydrogenase; Pro	4e-04
PRK08303	305	PRK08303, PRK08303, short chain dehydrogenase; Pro	6e-04
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	6e-04
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	8e-04
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	0.001
cd05274	375	cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatt	0.001
PRK08415	274	PRK08415, PRK08415, enoyl-(acyl carrier protein) r	0.001
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	0.002
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	0.003

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score =  396 bits (1019), Expect = e-141
 Identities = 153/251 (60%), Positives = 197/251 (78%)

Query: 15  RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGS 74
           RW+L+G TALVTGGTKG+G A+VEEL+ LGA V+TC+R + EL+EC+   + KG KV GS
Sbjct: 1   RWNLEGKTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREKGFKVEGS 60

Query: 75  VCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAF 134
           VCDVSSR +RQ L++TV+S F GKLNI VNN GT++ K   +Y  ED+SL+MSTNFE+A+
Sbjct: 61  VCDVSSRSERQELMDTVASHFGGKLNILVNNAGTNIRKEAKDYTEEDYSLIMSTNFEAAY 120

Query: 135 HLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIR 194
           HL +LAHPLL+ASG  +IV +SS  G+++   G  Y ATKGA+NQL ++LACEWAKDNIR
Sbjct: 121 HLSRLAHPLLKASGNGNIVFISSVAGVIAVPSGAPYGATKGALNQLTRSLACEWAKDNIR 180

Query: 195 TNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ 254
            N+VAPW I TP  EP++   + +D+V  RTP+ R GEP+EV++LVAFLCMPAASYITGQ
Sbjct: 181 VNAVAPWVIATPLVEPVIQQKENLDKVIERTPLKRFGEPEEVAALVAFLCMPAASYITGQ 240

Query: 255 TVCIDGGFTVN 265
            + +DGG T N
Sbjct: 241 IIAVDGGLTAN 251

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score =  297 bits (762), Expect = e-102
 Identities = 113/257 (43%), Positives = 159/257 (61%), Gaps = 3/257 (1%)

Query: 13  QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHL--QMKGLK 70
           Q+RW L G TAL+TG +KG+GLA+  E   LGA V   +R    L +    L  +    +
Sbjct: 2   QHRWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPERE 61

Query: 71  VTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNF 130
           V G   DVS    R+ +++ V   ++G L+I VNN G ++ K  ++Y  +++  +  TN 
Sbjct: 62  VHGLAADVSDDEDRRAILDWVEDHWDG-LHILVNNAGGNIRKAAIDYTEDEWRGIFETNL 120

Query: 131 ESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAK 190
            SAF L + AHPLL+   +++IV + S  G+     G  Y  TK A+ Q+ +NLA EWA+
Sbjct: 121 FSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMTKAALLQMTRNLAVEWAE 180

Query: 191 DNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY 250
           D IR N+VAPWYIRTP T   L +  + ++V  RTPM R+GEP+EV++ VAFLCMPAASY
Sbjct: 181 DGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPEEVAAAVAFLCMPAASY 240

Query: 251 ITGQTVCIDGGFTVNGF 267
           ITGQ + +DGGF   GF
Sbjct: 241 ITGQCIAVDGGFLRYGF 257

Length = 257

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  213 bits (545), Expect = 2e-69
 Identities = 83/237 (35%), Positives = 115/237 (48%), Gaps = 3/237 (1%)

Query: 23  ALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRP 82
           ALVTG + G+G A+   L+  GA V    R E  L E    ++  G        DVS   
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALAELAA-IEALGGNAVAVQADVSDEE 59

Query: 83  QRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHP 142
             + L+      F G+L+I VNN G +   P  E   ED+  V+  N    F L + A P
Sbjct: 60  DVEALVEEALEEF-GRLDILVNNAGIARPGPLEELTDEDWDRVLDVNLTGVFLLTRAALP 118

Query: 143 LLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWY 202
            ++  G   IV +SS  G+        Y+A+K A+  L ++LA E A   IR N+VAP  
Sbjct: 119 HMKKQGGGRIVNISSVAGLRPLPGQAAYAASKAALEGLTRSLALELAPYGIRVNAVAPGL 178

Query: 203 IRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCID 259
           + TP    L        E+ +  P+GRLG P+EV+  V FL    ASYITGQ + +D
Sbjct: 179 VDTPMLAKLGPEEAE-KELAAAIPLGRLGTPEEVAEAVVFLASDEASYITGQVIPVD 234

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  210 bits (537), Expect = 6e-68
 Identities = 90/245 (36%), Positives = 122/245 (49%), Gaps = 3/245 (1%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           SLQG TALVTG ++G+G A+   L+  GA V      E         L+  G +    V 
Sbjct: 2   SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVF 61

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           DVS     + LI      F G L+I VNN G +        + ED+  V+  N    F++
Sbjct: 62  DVSDEAAVRALIEAAVEAF-GALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNV 120

Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTN 196
            + A P +  +    IV +SS  G+      T YSA K  +    K LA E A   I  N
Sbjct: 121 VRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKAGVIGFTKALALELASRGITVN 180

Query: 197 SVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTV 256
           +VAP +I T  TE L    K   E+    P+GRLG+P+EV++ VAFL   AASYITGQ +
Sbjct: 181 AVAPGFIDTDMTEGLPEEVK--AEILKEIPLGRLGQPEEVANAVAFLASDAASYITGQVI 238

Query: 257 CIDGG 261
            ++GG
Sbjct: 239 PVNGG 243

Length = 246

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  197 bits (503), Expect = 7e-63
 Identities = 94/254 (37%), Positives = 127/254 (50%), Gaps = 11/254 (4%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVH-TCSRTETELNECIH--HLQMKGLKVTG 73
            L G  ALVTG + G+G A+   L+  GA V     R+E E  E +     +  G +   
Sbjct: 2   DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAA 61

Query: 74  SVCDVSSRP-QRQTLINTVSSLFNGKLNIFVNNVG-TSVLKPTLEYNAEDFSLVMSTNFE 131
              DVS      + L+      F G+++I VNN G      P  E   ED+  V+  N  
Sbjct: 62  VAADVSDDEESVEALVAAAEEEF-GRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLL 120

Query: 132 SAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKD 191
            AF L + A PL++      IV +SS  G+        Y+A+K A+  L K LA E A  
Sbjct: 121 GAFLLTRAALPLMKK---QRIVNISSVAGLGGPPGQAAYAASKAALIGLTKALALELAPR 177

Query: 192 NIRTNSVAPWYIRTPFTEPLLGNGKF-VDEVKSRTPMGRLGEPKEVSSLVAFLCMP-AAS 249
            IR N+VAP YI TP T  L       +  + +R P+GRLG P+EV++ VAFL    AAS
Sbjct: 178 GIRVNAVAPGYIDTPMTAALESAELEALKRLAARIPLGRLGTPEEVAAAVAFLASDEAAS 237

Query: 250 YITGQTVCIDGGFT 263
           YITGQT+ +DGG  
Sbjct: 238 YITGQTLPVDGGLL 251

Length = 251

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score =  197 bits (502), Expect = 1e-62
 Identities = 83/250 (33%), Positives = 115/250 (46%), Gaps = 3/250 (1%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
            L+G  ALVTG  +G+G A+   L+  GA V        +       ++  G K      
Sbjct: 3   DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQV 62

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           DV  R   +  +      F G+L+I V N G   L P  E + E +  V+  N    F L
Sbjct: 63  DVRDRAALKAAVAAGVEDF-GRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLL 121

Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEWAKDNIRT 195
            Q A P L  +G   IVL SS  G      G   Y+A+K  +    + LA E A  NI  
Sbjct: 122 TQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASKAGLVGFTRALALELAARNITV 181

Query: 196 NSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT 255
           NSV P  + TP    L         + +  P+GRLGEP+++++ V FL    A YITGQT
Sbjct: 182 NSVHPGGVDTPMAGNLGDAQWAEA-IAAAIPLGRLGEPEDIAAAVLFLASDEARYITGQT 240

Query: 256 VCIDGGFTVN 265
           + +DGG T+ 
Sbjct: 241 LPVDGGATLP 250

Length = 251

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  192 bits (491), Expect = 7e-61
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 5/251 (1%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L+G  A+VTG + G+G  +    +  GA V    R E         +   G +      D
Sbjct: 3   LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGG-RAIAVAAD 61

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTS-VLKPTLEYNAEDFSLVMSTNFESAFHL 136
           VS     +  +      F G ++I VNN GT+    P L+ +  +F  + + N +S +  
Sbjct: 62  VSDEADVEAAVAAALERF-GSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLW 120

Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTN 196
            Q A P +R  G  +IV ++S  G+        Y+A+KGA+  L K LA E   D IR N
Sbjct: 121 TQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKGAVITLTKALAAELGPDKIRVN 180

Query: 197 SVAPWYIRTPFTEPLLGNGKF--VDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ 254
           +VAP  + T   E  +G        +  +  P+GRLG P+++++   FL    AS+ITG 
Sbjct: 181 AVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAALFLASDEASWITGV 240

Query: 255 TVCIDGGFTVN 265
           T+ +DGG  V 
Sbjct: 241 TLVVDGGRCVG 251

Length = 251

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score =  192 bits (489), Expect = 9e-61
 Identities = 77/248 (31%), Positives = 126/248 (50%), Gaps = 1/248 (0%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           SL+G  ALVTG ++G+G  +   L+  GA +   SR E +  E    ++ +G++ T   C
Sbjct: 2   SLKGKVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEGVEATAFTC 61

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           DVS     +  +  +   F GK++I VNN G     P  E+   ++  V+  N    F +
Sbjct: 62  DVSDEEAIKAAVEAIEEDF-GKIDILVNNAGIIRRHPAEEFPEAEWRDVIDVNLNGVFFV 120

Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTN 196
            Q     +   G   I+ + S L  +       Y+A+KG +  L K LA EWA+  I+ N
Sbjct: 121 SQAVARHMIKQGHGKIINICSLLSELGGPPVPAYAASKGGVAGLTKALATEWARHGIQVN 180

Query: 197 SVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTV 256
           ++AP Y  T  TE ++ + +F D++  R P GR G+P+++     FL   A+ Y+ GQ +
Sbjct: 181 AIAPGYFATEMTEAVVADPEFNDDILKRIPAGRWGQPEDLVGAAVFLASDASDYVNGQII 240

Query: 257 CIDGGFTV 264
            +DGG+  
Sbjct: 241 FVDGGWLA 248

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  184 bits (470), Expect = 8e-58
 Identities = 78/250 (31%), Positives = 128/250 (51%), Gaps = 4/250 (1%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVH-TCSRTETELNECIHHLQMKGLKVTGSV 75
           SL+G  ALVTG ++G+G A+ E L+  GA V    + +E      +  +   G K     
Sbjct: 2   SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQ 61

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
            DVS     +  ++   + F G ++I VNN G +     +    ED+  V+ TN    F+
Sbjct: 62  GDVSDAESVERAVDEAKAEF-GGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFN 120

Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRT 195
           L +     +    +  I+ +SS +G++       Y+A+K  +    K+LA E A   I  
Sbjct: 121 LTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASKAGVIGFTKSLARELASRGITV 180

Query: 196 NSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT 255
           N+VAP +I T  T+ L       + + ++ P+GRLG+P+E++S VAFL    A+YITGQT
Sbjct: 181 NAVAPGFIETDMTDAL--PEDVKEAILAQIPLGRLGQPEEIASAVAFLASDEAAYITGQT 238

Query: 256 VCIDGGFTVN 265
           + ++GG  + 
Sbjct: 239 LHVNGGMVMG 248

Length = 248

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score =  178 bits (453), Expect = 2e-55
 Identities = 88/243 (36%), Positives = 133/243 (54%), Gaps = 10/243 (4%)

Query: 23  ALVTGGTKGLGLAVVEELSMLGATVHTCSRT-ETELNECIHHLQMKGLKVTGSVCDVSSR 81
           ALVTG ++G+G A+  +L+  GA V    R+ E    E +  L+  G+K  G VCDVS R
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDR 60

Query: 82  PQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLA- 140
              + ++  +     G ++I VNN G +     +    ED+  V+ TN    F+L Q   
Sbjct: 61  EDVKAVVEEIEEEL-GPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVL 119

Query: 141 HPLLRA-SGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEWAKDNIRTNSV 198
             +++  SG   I+ +SS +G+   N G   Y+A+K  +    K+LA E A  NI  N+V
Sbjct: 120 RIMIKQRSGR--IINISSVVGL-MGNAGQANYAASKAGVIGFTKSLAKELASRNITVNAV 176

Query: 199 APWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCI 258
           AP +I T  T+ L  + K   ++ S+ P+GR G P+EV++ VAFL    ASYITGQ + +
Sbjct: 177 APGFIDTDMTDKL--SEKVKKKILSQIPLGRFGTPEEVANAVAFLASDEASYITGQVIHV 234

Query: 259 DGG 261
           DGG
Sbjct: 235 DGG 237

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score =  178 bits (453), Expect = 2e-55
 Identities = 80/253 (31%), Positives = 117/253 (46%), Gaps = 10/253 (3%)

Query: 20  GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVS 79
           G  ALVT  + G+GLA+   L+  GA V  C+R    L      L+  G  V   V D++
Sbjct: 1   GKVALVTAASSGIGLAIARALAREGARVAICARNRENLERAASELRAGGAGVLAVVADLT 60

Query: 80  SRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQL 139
                  L+      F G+++I VNN G     P  E   ED+         S   + + 
Sbjct: 61  DPEDIDRLVEKAGDAF-GRVDILVNNAGGPPPGPFAELTDEDWLEAFDLKLLSVIRIVRA 119

Query: 140 AHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVA 199
             P ++  G   IV +SS           + +  +  +  L K L+ E A D +  NSV 
Sbjct: 120 VLPGMKERGWGRIVNISSLTVKEPEPNLVLSNVARAGLIGLVKTLSRELAPDGVTVNSVL 179

Query: 200 PWYIRTPFTEPLL-----GNGKFVDEVK----SRTPMGRLGEPKEVSSLVAFLCMPAASY 250
           P YI T     LL       G  V+E +    S+ P+GR+G+P+E+++L+AFL    ASY
Sbjct: 180 PGYIDTERVRRLLEARAEKEGISVEEAEKEVASQIPLGRVGKPEELAALIAFLASEKASY 239

Query: 251 ITGQTVCIDGGFT 263
           ITGQ + +DGG T
Sbjct: 240 ITGQAILVDGGLT 252

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  176 bits (449), Expect = 9e-55
 Identities = 80/253 (31%), Positives = 119/253 (47%), Gaps = 12/253 (4%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVH-TCSRTETELNECIHHLQMKGLKVTGSV 75
           SL G  ALVTG  +GLG A+   L+  GA V       E    E +  ++  G +     
Sbjct: 3   SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQ 62

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
            DV+ +   +  +      F G+++I VNN G    KP  + + +++  V+  N    FH
Sbjct: 63  ADVTDKAALEAAVAAAVERF-GRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFH 121

Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVGTV----YSATKGAMNQLAKNLACEWAKD 191
           L +   P +R      IV +SS    V+   G      Y+A K  +  L K LA E A+ 
Sbjct: 122 LLRAVVPPMRKQRGGRIVNISS----VAGLPGWPGRSNYAAAKAGLVGLTKALARELAEY 177

Query: 192 NIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI 251
            I  N VAP  I T   E  +   +   +  + TP+GR G P++++  VAFLC  A+ YI
Sbjct: 178 GITVNMVAPGDIDTDMKEATIEEAREAKD--AETPLGRSGTPEDIARAVAFLCSDASDYI 235

Query: 252 TGQTVCIDGGFTV 264
           TGQ + + GG  V
Sbjct: 236 TGQVIEVTGGVDV 248

Length = 249

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  176 bits (448), Expect = 2e-54
 Identities = 85/249 (34%), Positives = 124/249 (49%), Gaps = 6/249 (2%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATV--HTCSRTETELNECIHHLQMKGLKVTGSV 75
           L G  A+VTG + G+G A+ E L+  GA V        E    E +  ++ +G       
Sbjct: 3   LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAY-DINEEAAQELLEEIKEEGGDAIAVK 61

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
            DVSS    + L+  +   F GK++I VNN G S      +   E++  V+  N      
Sbjct: 62  ADVSSEEDVENLVEQIVEKF-GKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVML 120

Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRT 195
           L + A P +    +  IV +SS  G++ A+   +YSA+KGA+N   K LA E A   IR 
Sbjct: 121 LTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASKGAVNAFTKALAKELAPSGIRV 180

Query: 196 NSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT 255
           N+VAP  I T          K    +    P+GRLG+P+E++ +V FL    ASYITGQ 
Sbjct: 181 NAVAPGAIDTEMWSSFSEEDKE--GLAEEIPLGRLGKPEEIAKVVLFLASDDASYITGQI 238

Query: 256 VCIDGGFTV 264
           + +DGG+T 
Sbjct: 239 ITVDGGWTC 247

Length = 247

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score =  174 bits (443), Expect = 6e-54
 Identities = 80/245 (32%), Positives = 128/245 (52%), Gaps = 13/245 (5%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
            ALVTG ++G+G A+   L+  GA V    R+E    E +  ++  G        DVS R
Sbjct: 2   VALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGGNAAALEADVSDR 61

Query: 82  PQRQTLINTVSSLFNGKLNIFVNNVG----TSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
              + L+  V + F G ++I VNN G      +++ + E    D+  V++ N    F++ 
Sbjct: 62  EAVEALVEKVEAEF-GPVDILVNNAGITRDNLLMRMSEE----DWDAVINVNLTGVFNVT 116

Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEWAKDNIRTN 196
           Q     +    +  I+ +SS +G++  N G   Y+A+K  +    K+LA E A   I  N
Sbjct: 117 QAVIRAMIKRRSGRIINISSVVGLI-GNPGQANYAASKAGVIGFTKSLAKELASRGITVN 175

Query: 197 SVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTV 256
           +VAP +I T  T+ L    K  +++  + P+GRLG P+EV++ VAFL    ASYITGQ +
Sbjct: 176 AVAPGFIDTDMTDAL--PEKVKEKILKQIPLGRLGTPEEVANAVAFLASDDASYITGQVL 233

Query: 257 CIDGG 261
            ++GG
Sbjct: 234 HVNGG 238

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score =  174 bits (443), Expect = 1e-53
 Identities = 84/257 (32%), Positives = 129/257 (50%), Gaps = 14/257 (5%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
            L G+  LVTGG  G+G A+ E  +  GA VH C  +E  L      L   G KVT +V 
Sbjct: 8   PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLP--GAKVTATVA 65

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLE-YNAEDFSLVMSTNFESAFH 135
           DV+   Q + + +T    F G L++ VNN G +     ++    E +   ++ N    F+
Sbjct: 66  DVADPAQVERVFDTAVERF-GGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFY 124

Query: 136 LCQLAHPLLRASGA-ASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIR 194
             + A PLL+ASG    I+ +SS  G +     T Y+A+K A+  L K+LA E     IR
Sbjct: 125 FARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASKWAVVGLVKSLAIELGPLGIR 184

Query: 195 TNSVAPWYIRTPFTEPLLGN-----GKFVDEVKSR----TPMGRLGEPKEVSSLVAFLCM 245
            N++ P  +R P    ++       G  +DE++        +GR+ EP+++++   FL  
Sbjct: 185 VNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAATALFLAS 244

Query: 246 PAASYITGQTVCIDGGF 262
           PAA YITGQ + +DG  
Sbjct: 245 PAARYITGQAISVDGNV 261

Length = 264

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score =  172 bits (439), Expect = 3e-53
 Identities = 86/252 (34%), Positives = 132/252 (52%), Gaps = 8/252 (3%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK-GLKVTGSV 75
           SL+G  A+VTGG++G+GLA+   L+  GA V     +     E    L  K G+K     
Sbjct: 5   SLKGKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVKTKAYK 64

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
           CDVSS+   +     +   F GK++I + N G +V KP L+Y  E ++ V+  N    F+
Sbjct: 65  CDVSSQESVEKTFKQIQKDF-GKIDILIANAGITVHKPALDYTYEQWNKVIDVNLNGVFN 123

Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVG---TVYSATKGAMNQLAKNLACEWAKDN 192
             Q A  + +  G  S+++ +S  G +  N       Y+A+K A+  LAK+LA EWAK  
Sbjct: 124 CAQAAAKIFKKQGKGSLIITASMSGTI-VNRPQPQAAYNASKAAVIHLAKSLAVEWAKYF 182

Query: 193 IRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT 252
           IR NS++P YI T  T     + +   + +S  P+ R+  P+E+     +L   A+SY T
Sbjct: 183 IRVNSISPGYIDTDLT--DFVDKELRKKWESYIPLKRIALPEELVGAYLYLASDASSYTT 240

Query: 253 GQTVCIDGGFTV 264
           G  + IDGG+T 
Sbjct: 241 GSDLIIDGGYTC 252

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  165 bits (420), Expect = 2e-50
 Identities = 81/258 (31%), Positives = 118/258 (45%), Gaps = 21/258 (8%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATV-------HTCSRTETELNECIHHLQMKGL 69
            L+G  A+VTGG +GLGLA    L   GA V               EL +      +   
Sbjct: 2   RLKGKVAIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAAELGDAARFFHL--- 58

Query: 70  KVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTN 129
                  DV+       +++T    F G+L++ VNN G            E++  ++  N
Sbjct: 59  -------DVTDEDGWTAVVDTAREAF-GRLDVLVNNAGILTGGTVETTTLEEWRRLLDIN 110

Query: 130 FESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWA 189
               F   +   P ++ +G  SI+ MSS  G+V       Y+A+KGA+  L K+ A E A
Sbjct: 111 LTGVFLGTRAVIPPMKEAGGGSIINMSSIEGLVGDPALAAYNASKGAVRGLTKSAALECA 170

Query: 190 K--DNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA 247
                IR NSV P YI TP T+ LL     +      TPMGR GEP E++  V +L    
Sbjct: 171 TQGYGIRVNSVHPGYIYTPMTDELLIAQGEMG-NYPNTPMGRAGEPDEIAYAVVYLASDE 229

Query: 248 ASYITGQTVCIDGGFTVN 265
           +S++TG  + +DGG+T  
Sbjct: 230 SSFVTGSELVVDGGYTAG 247

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score =  163 bits (415), Expect = 2e-49
 Identities = 80/257 (31%), Positives = 125/257 (48%), Gaps = 8/257 (3%)

Query: 13  QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVT 72
              + L G TALVTGG++GLGL + E L   GA V   +R   EL E   HL+  G+   
Sbjct: 5   LELFDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDAL 64

Query: 73  GSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFES 132
               DV+     + L       F G ++I VNN G +   P  ++  E +  VM+ N   
Sbjct: 65  WIAADVADEADIERLAEETLERF-GHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRG 123

Query: 133 AFHLCQ-LAHPLLRASGAASIVLMSSALGIV---SANVGTV-YSATKGAMNQLAKNLACE 187
            F L Q +A   +   G   I+ ++S  G+       + T+ Y+ +KGA+    + LA E
Sbjct: 124 LFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINFTRALAAE 183

Query: 188 WAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA 247
           W    IR N++AP +  T  T   L      +++ + TP+GRLG+ +++      L   A
Sbjct: 184 WGPHGIRVNAIAPGFFPTKMTRGTLERLG--EDLLAHTPLGRLGDDEDLKGAALLLASDA 241

Query: 248 ASYITGQTVCIDGGFTV 264
           + +ITGQ + +DGG + 
Sbjct: 242 SKHITGQILAVDGGVSA 258

Length = 259

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score =  159 bits (403), Expect = 1e-47
 Identities = 74/251 (29%), Positives = 118/251 (47%), Gaps = 1/251 (0%)

Query: 14  NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTG 73
            R+SL G  ALVTG  +GLG  +   L+  GA V    R    L   +  L+  G     
Sbjct: 5   QRFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEA 64

Query: 74  SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESA 133
              D++           + +  +G+L+I VNNVG    +P  E +      ++ T+  + 
Sbjct: 65  LAFDIADEEAVAAAFARIDAE-HGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAP 123

Query: 134 FHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNI 193
             L +LA   ++  G   I+ ++S  G V+     VY A K  +  L + LA E+    I
Sbjct: 124 ILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAAKQGLTGLMRALAAEFGPHGI 183

Query: 194 RTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG 253
            +N++AP Y  T     +  +      +  RTP+GR G P+E++    FL  PAASY+ G
Sbjct: 184 TSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAGAAVFLASPAASYVNG 243

Query: 254 QTVCIDGGFTV 264
             + +DGG++V
Sbjct: 244 HVLAVDGGYSV 254

Length = 256

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score =  157 bits (398), Expect = 4e-47
 Identities = 76/248 (30%), Positives = 118/248 (47%), Gaps = 7/248 (2%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTETELNECIHHLQMKGLKVTGSV 75
           L G  ALVTG ++G+G A+ + L+  GA   V+  S       E +  ++  G K     
Sbjct: 1   LAGKVALVTGASRGIGRAIAKRLARDGASVVVNYASSKA-AAEEVVAEIEAAGGKAIAVQ 59

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
            DVS   Q   L +     F G ++I VNN G  + KP  E + E+F  + + N + AF 
Sbjct: 60  ADVSDPSQVARLFDAAEKAF-GGVDILVNNAGVMLKKPIAETSEEEFDRMFTVNTKGAFF 118

Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRT 195
           + Q A   LR  G   I+ +SS+L          Y+ +K A+    + LA E     I  
Sbjct: 119 VLQEAAKRLRDGG--RIINISSSLTAAYTPNYGAYAGSKAAVEAFTRVLAKELGGRGITV 176

Query: 196 NSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT 255
           N+VAP  + T            V+     +P+GRLGEP++++ +VAFL  P   ++ GQ 
Sbjct: 177 NAVAPGPVDTDMFYAGKTEEA-VEGYAKMSPLGRLGEPEDIAPVVAFLASPDGRWVNGQV 235

Query: 256 VCIDGGFT 263
           +  +GG+ 
Sbjct: 236 IRANGGYV 243

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score =  156 bits (397), Expect = 5e-47
 Identities = 75/252 (29%), Positives = 112/252 (44%), Gaps = 8/252 (3%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           +L G  ALVTG  +GLG A  E L+  GATV        E  E    L+  G +      
Sbjct: 4   NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAA 63

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           D++     Q   +  ++   G L+  VNN G +  K   E + + +  VM+ N    F +
Sbjct: 64  DLADPASVQRFFDAAAAAL-GGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLM 122

Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTN 196
            + A P LR SG   IV ++S   +  A     Y A+KGA+  + ++LA E     I  N
Sbjct: 123 LRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASKGAVIGMTRSLARELGGRGITVN 182

Query: 197 SVAPWYIRTPFTEPLLGNGK---FVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG 253
           ++AP    T  T                     + RL  P +V+  V FL   AA ++TG
Sbjct: 183 AIAPGLTATEATA----YVPADERHAYYLKGRALERLQVPDDVAGAVLFLLSDAARFVTG 238

Query: 254 QTVCIDGGFTVN 265
           Q + ++GGF +N
Sbjct: 239 QLLPVNGGFVMN 250

Length = 250

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score =  153 bits (389), Expect = 1e-45
 Identities = 75/248 (30%), Positives = 119/248 (47%), Gaps = 6/248 (2%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGL-KVTGSVC 76
           L+G  A +TGG  G+G A+ +  + LGA+V    R    L      +      +     C
Sbjct: 1   LKGKVAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSATGGRAHPIQC 60

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           DV      +  ++     F GK++I +NN   + L P    +   F  V+  +    F+ 
Sbjct: 61  DVRDPEAVEAAVDETLKEF-GKIDILINNAAGNFLAPAESLSPNGFKTVIDIDLNGTFNT 119

Query: 137 CQLAHP-LLRASGAASIVLMSSALGIVSANVGTVYS-ATKGAMNQLAKNLACEWAKDNIR 194
            +     L+ A    SI+ +S+     + +   V+S A K  ++ L ++LA EW    IR
Sbjct: 120 TKAVGKRLIEAKHGGSILNISATYA-YTGSPFQVHSAAAKAGVDALTRSLAVEWGPYGIR 178

Query: 195 TNSVAPWYI-RTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG 253
            N++AP  I  T   E L  +GK   ++  R P+GRLG P+E+++L  FL   AASYI G
Sbjct: 179 VNAIAPGPIPTTEGMERLAPSGKSEKKMIERVPLGRLGTPEEIANLALFLLSDAASYING 238

Query: 254 QTVCIDGG 261
            T+ +DGG
Sbjct: 239 TTLVVDGG 246

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score =  152 bits (387), Expect = 2e-45
 Identities = 80/259 (30%), Positives = 135/259 (52%), Gaps = 17/259 (6%)

Query: 14  NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTG 73
           N +SL+G  AL+TG + G+G A+ +  +  GAT+      +  +++ +   +  G++  G
Sbjct: 4   NLFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHG 63

Query: 74  SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESA 133
            VCDV+     Q +++ +     G ++I VNN G     P LE +AEDF  V+  +  + 
Sbjct: 64  YVCDVTDEDGVQAMVSQIEKEV-GVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAP 122

Query: 134 FHLCQLAHPLLRASGAASIV---LMSSALG--IVSANVGTVYSATKGAMNQLAKNLACEW 188
           F + +   P +   G   I+    M S LG   VSA     Y+A KG +  L KN+A E+
Sbjct: 123 FIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSA-----YAAAKGGLKMLTKNIASEY 177

Query: 189 AKDNIRTNSVAPWYIRTPFTEPL-----LGNGKFVDE-VKSRTPMGRLGEPKEVSSLVAF 242
            + NI+ N + P YI TP T PL      G+    D+ + ++TP  R G+P++++    F
Sbjct: 178 GEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLAGPAVF 237

Query: 243 LCMPAASYITGQTVCIDGG 261
           L   A++++ G  + +DGG
Sbjct: 238 LASDASNFVNGHILYVDGG 256

Length = 265

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  158 bits (402), Expect = 3e-45
 Identities = 87/252 (34%), Positives = 127/252 (50%), Gaps = 8/252 (3%)

Query: 19  QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDV 78
           Q    LVTG   G+G A  +  +  G  V    R    +          G        DV
Sbjct: 4   QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADR---NVERARERADSLGPDHHALAMDV 60

Query: 79  SSRPQRQTLINTVSSLFNGKLNIFVNNVGTS--VLKPTLEYNAEDFSLVMSTNFESAFHL 136
           S   Q +     +   F G++++ VNN G +   +  TL+   E+F+ + + N   A+ +
Sbjct: 61  SDEAQIREGFEQLHREF-GRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLV 119

Query: 137 CQLAHPLLRASG-AASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRT 195
            + A  L+   G  A+IV ++S  G+V+    T YSA+K A+  L ++LACEWA   IR 
Sbjct: 120 AREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVISLTRSLACEWAAKGIRV 179

Query: 196 NSVAPWYIRTPFTEPLLGNGKF-VDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ 254
           N+V P Y+RT     L   GK     V+SR P+GRLG P+E++  V FL    ASYITG 
Sbjct: 180 NAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFFLASDQASYITGS 239

Query: 255 TVCIDGGFTVNG 266
           T+ +DGG+TV G
Sbjct: 240 TLVVDGGWTVYG 251

Length = 520

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score =  151 bits (384), Expect = 4e-45
 Identities = 77/244 (31%), Positives = 116/244 (47%), Gaps = 4/244 (1%)

Query: 23  ALVTGGTKGLGLAVVEELSMLGATVH-TCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
           ALVTGG++G+G A+   L+  GA V     +++    E    ++  G K      DVS  
Sbjct: 1   ALVTGGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAEIEELGGKAVVVRADVSQP 60

Query: 82  PQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAH 141
              + +   V   F G+L++ V+N      +P  E     +   M+TN ++  H  Q A 
Sbjct: 61  QDVEEMFAAVKERF-GRLDVLVSNAAAGAFRPLSELTPAHWDAKMNTNLKALVHCAQQAA 119

Query: 142 PLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAP 200
            L+R  G   IV +SS LG + A          K A+  L + LA E     IR N+V+P
Sbjct: 120 KLMRERGGGRIVAISS-LGSIRALPNYLAVGTAKAALEALVRYLAVELGPRGIRVNAVSP 178

Query: 201 WYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDG 260
             I T            ++   + TP GR+G P++V+  V FLC  AA  ITGQT+ +DG
Sbjct: 179 GVIDTDALAHFPNREDLLEAAAANTPAGRVGTPQDVADAVGFLCSDAARMITGQTLVVDG 238

Query: 261 GFTV 264
           G ++
Sbjct: 239 GLSI 242

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score =  151 bits (383), Expect = 7e-45
 Identities = 83/250 (33%), Positives = 129/250 (51%), Gaps = 2/250 (0%)

Query: 13  QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVT 72
             R  L    ALVT  T G+GLA+   L+  GA V   SR +  ++  +  LQ +GL VT
Sbjct: 3   TRRDPLANKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGEGLSVT 62

Query: 73  GSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPT-LEYNAEDFSLVMSTNFE 131
           G+VC V     R+ L+ T  +L  G ++I V+N   +      L+   E +  ++  N +
Sbjct: 63  GTVCHVGKAEDRERLVATAVNLHGG-VDILVSNAAVNPFFGNILDSTEEVWDKILDVNVK 121

Query: 132 SAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKD 191
           +   + +   P +   G  S+V++SS            Y+ +K A+  L KNLA E A  
Sbjct: 122 ATALMTKAVVPEMEKRGGGSVVIVSSVAAFHPFPGLGPYNVSKTALLGLTKNLAPELAPR 181

Query: 192 NIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI 251
           NIR N +AP  I+T F+  L  +    + +K    + RLG+P++ + +V+FLC   ASYI
Sbjct: 182 NIRVNCLAPGLIKTSFSSALWMDKAVEESMKETLRIRRLGQPEDCAGIVSFLCSEDASYI 241

Query: 252 TGQTVCIDGG 261
           TG+TV + GG
Sbjct: 242 TGETVVVGGG 251

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score =  151 bits (382), Expect = 9e-45
 Identities = 87/253 (34%), Positives = 126/253 (49%), Gaps = 12/253 (4%)

Query: 16  WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHT----CSRTETELNECIHHLQMKGLKV 71
            SL     L+TGG+ GLG A+   L+  GA V        R   E +     ++  G K 
Sbjct: 2   ASLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKA 61

Query: 72  TGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFE 131
            G   DV      +  ++     F G+L+I VNN G +      E + E++  V+  N +
Sbjct: 62  LGLAFDVRDFAATRAALDAGVEEF-GRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLD 120

Query: 132 SAFHLCQ-LAHPLLRASGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEWA 189
             F++ Q    P++RA     IV ++S +  V  N G V Y+A+K  +  L K LA E A
Sbjct: 121 GFFNVTQAALPPMIRARRGGRIVNIAS-VAGVRGNRGQVNYAASKAGLIGLTKTLANELA 179

Query: 190 KDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAAS 249
              I  N+VAP  I TP  +    N    + + +  P+ RLGEP EV++LVAFL   AAS
Sbjct: 180 PRGITVNAVAPGAINTPMAD----NAAPTEHLLNPVPVQRLGEPDEVAALVAFLVSDAAS 235

Query: 250 YITGQTVCIDGGF 262
           Y+TGQ + +DGGF
Sbjct: 236 YVTGQVIPVDGGF 248

Length = 249

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score =  151 bits (382), Expect = 1e-44
 Identities = 77/251 (30%), Positives = 128/251 (50%), Gaps = 3/251 (1%)

Query: 14  NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTG 73
           +R+ L    A+VTG  +GLG A+    +  GA V   +RTE++L+E    ++  G +   
Sbjct: 4   DRFRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHV 63

Query: 74  SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESA 133
              D++       L       F G+L+I VNNVG ++  P L  + +D +   + N  +A
Sbjct: 64  VAADLAHPEATAGLAGQAVEAF-GRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATA 122

Query: 134 FHLCQLAHPL-LRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDN 192
             L   A PL L  SG  S++ +SS +G ++      Y   K A+    +  A +     
Sbjct: 123 HALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAKAALAHYTRLAALDLCP-R 181

Query: 193 IRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT 252
           IR N++AP  I T   E +  N +    ++  TP+ RLG+P+++++   +L  PA SY+T
Sbjct: 182 IRVNAIAPGSILTSALEVVAANDELRAPMEKATPLRRLGDPEDIAAAAVYLASPAGSYLT 241

Query: 253 GQTVCIDGGFT 263
           G+T+ +DGG T
Sbjct: 242 GKTLEVDGGLT 252

Length = 263

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score =  150 bits (381), Expect = 2e-44
 Identities = 80/254 (31%), Positives = 122/254 (48%), Gaps = 9/254 (3%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L G TAL+TG  +G+G  +    +  GA +     +  E+ +    L  +G + T  V D
Sbjct: 4   LTGKTALITGALQGIGEGIARVFARHGANLILLDISP-EIEKLADELCGRGHRCTAVVAD 62

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           V         I        G+++I VNN G   L   L+ + ED    +  N +  +++ 
Sbjct: 63  VRDPASVAAAIKRAKEKE-GRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVT 121

Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAKDNIRTN 196
           +   P + A     IV+MSS  G + A+ G T Y+ TK A+  L K+LA E+A+  IR N
Sbjct: 122 KAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVN 181

Query: 197 SVAPWYIRTPFTEPLLGNG------KFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY 250
           ++ P Y+RTP  E +            + E+    P+ RL +P EV  L AFL    +SY
Sbjct: 182 AICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAFLASDESSY 241

Query: 251 ITGQTVCIDGGFTV 264
           +TG    IDGG T+
Sbjct: 242 LTGTQNVIDGGSTL 255

Length = 263

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score =  147 bits (374), Expect = 2e-43
 Identities = 82/251 (32%), Positives = 120/251 (47%), Gaps = 9/251 (3%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATV----HTCSRTETELNECIHHLQMKGLKVTG 73
           L+G  ALVTG + G+G A+   L+  GA V     +      E+ E I  +  K + V  
Sbjct: 1   LKGKVALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEIKAVGGKAIAVQA 60

Query: 74  SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESA 133
              DVS       L  +    F G L+I VNN G      + E   ED++ V+  N    
Sbjct: 61  ---DVSKEEDVVALFQSAIKEF-GTLDILVNNAGLQGDASSHEMTLEDWNKVIDVNLTGQ 116

Query: 134 FHLCQLAHPLLRASGAA-SIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDN 192
           F   + A    R S     I+ MSS    +       Y+A+KG +  + K LA E+A   
Sbjct: 117 FLCAREAIKRFRKSKIKGKIINMSSVHEKIPWPGHVNYAASKGGVKMMTKTLAQEYAPKG 176

Query: 193 IRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT 252
           IR N++AP  I TP       + +   ++ S  PMGR+GEP+E+++  A+L    ASY+T
Sbjct: 177 IRVNAIAPGAINTPINAEAWDDPEQRADLLSLIPMGRIGEPEEIAAAAAWLASDEASYVT 236

Query: 253 GQTVCIDGGFT 263
           G T+ +DGG T
Sbjct: 237 GTTLFVDGGMT 247

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score =  147 bits (374), Expect = 2e-43
 Identities = 83/248 (33%), Positives = 124/248 (50%), Gaps = 2/248 (0%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           SL G  A+VTGG  GLG      L+  GA +   +   T  +E    ++ +G KVT    
Sbjct: 12  SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQV 70

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           D++     + ++      F GK++I VNN GT    P LEY  ED++ VM  N  S +HL
Sbjct: 71  DLTKPESAEKVVKEALEEF-GKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHL 129

Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTN 196
            Q    ++   G+  I+ ++S L          Y+A+K  +  L K  A E A  NI+ N
Sbjct: 130 SQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASKHGVAGLTKAFANELAAYNIQVN 189

Query: 197 SVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTV 256
           ++AP YI+T  T P+  +    DE+  R P GR GEP ++     FL   A+ Y+ G  +
Sbjct: 190 AIAPGYIKTANTAPIRADKNRNDEILKRIPAGRWGEPDDLMGAAVFLASRASDYVNGHIL 249

Query: 257 CIDGGFTV 264
            +DGG+ V
Sbjct: 250 AVDGGWLV 257

Length = 258

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  151 bits (382), Expect = 2e-42
 Identities = 87/250 (34%), Positives = 134/250 (53%), Gaps = 10/250 (4%)

Query: 20  GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC-DV 78
                +TGG +G+G AV +  +  G  +    R      +    L  + L    SV  D+
Sbjct: 269 PRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHL----SVQADI 324

Query: 79  SSRPQRQTLINTVSSLFNGKLNIFVNNVGTS-VLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           +     ++    + + + G+L++ VNN G + V KP+LE +AEDF+ V   N   AF   
Sbjct: 325 TDEAAVESAFAQIQARW-GRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACA 383

Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNS 197
           + A  L+   G   IV + S   +++      Y A+K A+  L+++LACEWA   IR N+
Sbjct: 384 RAAARLMSQGGV--IVNLGSIASLLALPPRNAYCASKAAVTMLSRSLACEWAPAGIRVNT 441

Query: 198 VAPWYIRTPFTEPLLGNGKF-VDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTV 256
           VAP YI TP    L  +G+   D ++ R P+GRLG+P+EV+  +AFL  PAASY+ G T+
Sbjct: 442 VAPGYIETPAVLALKASGRADFDSIRRRIPLGRLGDPEEVAEAIAFLASPAASYVNGATL 501

Query: 257 CIDGGFTVNG 266
            +DGG+T  G
Sbjct: 502 TVDGGWTAFG 511

Length = 520

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score =  144 bits (365), Expect = 3e-42
 Identities = 78/251 (31%), Positives = 123/251 (49%), Gaps = 9/251 (3%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
             G  ALVTGG  G+G A     +  GA V    R      E +  ++  G +     CD
Sbjct: 5   FSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACD 64

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTL-EYNAEDFSLVMSTNFESAFHL 136
           V+   + + L+    + + G+L+   NN G  + +  L E +  +F  +M  N +  + L
Sbjct: 65  VTRDAEVKALVEQTIAAY-GRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVW-L 122

Query: 137 C---QLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNI 193
           C   Q+  PL+ A G  +IV  +S  G+ +A   ++Y+A+K A+  L K+ A E+AK  I
Sbjct: 123 CMKYQI--PLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKSAAIEYAKKGI 180

Query: 194 RTNSVAPWYIRTPFTEPLLGNGKFVDE-VKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT 252
           R N+V P  I T              E   +  P+GR+G+ +EV+S V +LC   AS+ T
Sbjct: 181 RVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVASAVLYLCSDGASFTT 240

Query: 253 GQTVCIDGGFT 263
           G  + +DGG T
Sbjct: 241 GHALMVDGGAT 251

Length = 253

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score =  142 bits (359), Expect = 3e-41
 Identities = 79/262 (30%), Positives = 128/262 (48%), Gaps = 13/262 (4%)

Query: 7   TESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQM 66
           T++      + L G  A+VTGG  G+G A+ E  +  GA V    R+E      +    +
Sbjct: 2   TDTKQFDLAFDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSED--VAEVAAQLL 59

Query: 67  KGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVM 126
            G    G VCDVS     +  +  V S F G+++I VN+ G ++L P  + + ED+   +
Sbjct: 60  GG-NAKGLVCDVSDSQSVEAAVAAVISAF-GRIDILVNSAGVALLAPAEDVSEEDWDKTI 117

Query: 127 STNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLAC 186
             N + +F + Q     + A+G   IV ++S  G+V+      Y A+K  +  + K LA 
Sbjct: 118 DINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKAGVVGMTKVLAL 177

Query: 187 EWAKDNIRTNSVAPWYIRTPFTEPLLG----NGKFVDEVKSRTPMGRLGEPKEVSSLVAF 242
           EW    I  N+++P  + T      LG     G+  +  K   P GR   P+E+++   F
Sbjct: 178 EWGPYGITVNAISPTVVLTE-----LGKKAWAGEKGERAKKLIPAGRFAYPEEIAAAALF 232

Query: 243 LCMPAASYITGQTVCIDGGFTV 264
           L   AA+ ITG+ + IDGG+T+
Sbjct: 233 LASDAAAMITGENLVIDGGYTI 254

Length = 255

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  141 bits (358), Expect = 4e-41
 Identities = 80/254 (31%), Positives = 125/254 (49%), Gaps = 22/254 (8%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSV-- 75
            +G  AL+TGGT+G+G A+ E     GA V     +           + K L+  G    
Sbjct: 5   FKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAEN--------EAKELREKGVFTI 56

Query: 76  -CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAF 134
            CDV +R Q +     V   F G++++ VNN G   L P  E++ E ++ ++  N   A 
Sbjct: 57  KCDVGNRDQVKKSKEVVEKEF-GRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAI 115

Query: 135 HLCQLAHPLLRASGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEWAKDNI 193
           +      PLL+ S   +IV ++S  GI +A  GT  Y+ TK  +  L + LA E  K  I
Sbjct: 116 YTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITKAGIIILTRRLAFELGKYGI 175

Query: 194 RTNSVAPWYIRTPFTEPLLGNG------KFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA 247
           R N+VAP ++ T  T   L         K  +  +++T +   G+P++++++V FL    
Sbjct: 176 RVNAVAPGWVETDMT---LSGKSQEEAEKLRELFRNKTVLKTTGKPEDIANIVLFLASDD 232

Query: 248 ASYITGQTVCIDGG 261
           A YITGQ +  DGG
Sbjct: 233 ARYITGQVIVADGG 246

Length = 255

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score =  139 bits (353), Expect = 2e-40
 Identities = 72/250 (28%), Positives = 114/250 (45%), Gaps = 6/250 (2%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L G  A+VTG   G+G A  +  +  GA V    R           +   G +      D
Sbjct: 3   LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGG-RAFARQGD 61

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           V S    + L++ V++ + G+L++ VNN G       +  +  D+  VM  N    F   
Sbjct: 62  VGSAEAVEALVDFVAARW-GRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWA 120

Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNS 197
           + A P+++  G  SIV  +S L +        Y A+KGA+  L + +A + A D IR N+
Sbjct: 121 KYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGAIASLTRAMALDHATDGIRVNA 180

Query: 198 VAPWYIRTPFTEPLLGNGKFVDEVKS----RTPMGRLGEPKEVSSLVAFLCMPAASYITG 253
           VAP  I TP+   +       + ++     R PM R G  +EV+    FL    +S+ TG
Sbjct: 181 VAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALFLASDESSFATG 240

Query: 254 QTVCIDGGFT 263
            T+ +DGG+ 
Sbjct: 241 TTLVVDGGWL 250

Length = 252

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score =  139 bits (352), Expect = 2e-40
 Identities = 78/261 (29%), Positives = 125/261 (47%), Gaps = 27/261 (10%)

Query: 16  WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSR-------TETELN---ECIHHLQ 65
           +S+ G   LVTGG++G+G  + +     GA V   +R          EL+   ECI    
Sbjct: 2   FSVAGKIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEELSAYGECIAI-- 59

Query: 66  MKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLV 125
                      D+SS    + L+  V+   + +L++ VNN G +   P   +    +  V
Sbjct: 60  ---------PADLSSEEGIEALVARVAER-SDRLDVLVNNAGATWGAPLEAFPESGWDKV 109

Query: 126 MSTNFESAFHLCQLAHPLLRASGA----ASIVLMSSALGIV-SANVGTVYSATKGAMNQL 180
           M  N +S F L Q   PLLRA+      A ++ + S  GIV S      Y A+K A++QL
Sbjct: 110 MDINVKSVFFLTQALLPLLRAAATAENPARVINIGSIAGIVVSGLENYSYGASKAAVHQL 169

Query: 181 AKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLV 240
            + LA E A ++I  N++AP    +  T  LL +   ++  +   P+GR G P++++ L 
Sbjct: 170 TRKLAKELAGEHITVNAIAPGRFPSKMTAFLLNDPAALEAEEKSIPLGRWGRPEDMAGLA 229

Query: 241 AFLCMPAASYITGQTVCIDGG 261
             L   A +Y+TG  + +DGG
Sbjct: 230 IMLASRAGAYLTGAVIPVDGG 250

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score =  139 bits (351), Expect = 4e-40
 Identities = 78/249 (31%), Positives = 127/249 (51%), Gaps = 1/249 (0%)

Query: 16  WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSV 75
           + L G  ALVTG ++G+G A+ E L+  GA V    R   +L      L+ +GL      
Sbjct: 6   FDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALA 65

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
            DV+     +  I+   +   G ++I VNN G     P  ++ A+ F  ++ TN  S F+
Sbjct: 66  FDVTDHDAVRAAIDAFEAEI-GPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFY 124

Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRT 195
           + Q     + A GA  I+ ++S    ++      Y+ATKGA+  L K +A +WAK  ++ 
Sbjct: 125 VGQAVARHMIARGAGKIINIASVQSALARPGIAPYTATKGAVGNLTKGMATDWAKHGLQC 184

Query: 196 NSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT 255
           N++AP Y  TP    L+ + +F   ++ RTP GR G+ +E+     FL   A+S++ G  
Sbjct: 185 NAIAPGYFDTPLNAALVADPEFSAWLEKRTPAGRWGKVEELVGACVFLASDASSFVNGHV 244

Query: 256 VCIDGGFTV 264
           + +DGG T 
Sbjct: 245 LYVDGGITA 253

Length = 255

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  137 bits (348), Expect = 2e-39
 Identities = 71/263 (26%), Positives = 110/263 (41%), Gaps = 21/263 (7%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L+G  ALVTG   G+GL +   L+  GA V      +         LQ  G K  G   D
Sbjct: 2   LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMD 61

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           V+        I+     F G ++I VNN G   + P  ++  E +  +++   + AF   
Sbjct: 62  VTDEEAINAGIDYAVETF-GGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTT 120

Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNS 197
           + A P+++A G   I+ M+S  G+V +     Y + K  +  L K +A E A   +  N+
Sbjct: 121 KAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGLIGLTKVVALEGATHGVTVNA 180

Query: 198 VAPWYIRTPFTEPLLGNGKFVDEVKSR---------------TPMGRLGEPKEVSSLVAF 242
           + P Y+ TP         +  D  K R                P  R    +E++    F
Sbjct: 181 ICPGYVDTPLVR-----KQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYALF 235

Query: 243 LCMPAASYITGQTVCIDGGFTVN 265
           L   AA  +TGQ   +DGG+T  
Sbjct: 236 LASFAAKGVTGQAWVVDGGWTAQ 258

Length = 258

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score =  137 bits (347), Expect = 2e-39
 Identities = 80/260 (30%), Positives = 119/260 (45%), Gaps = 21/260 (8%)

Query: 20  GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVS 79
           G TALVTG   G+GLA+   L+  GA V      E             G  V     DV+
Sbjct: 1   GKTALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAGGSVIYLPADVT 60

Query: 80  SRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQL 139
              +   +I   ++ F G L+I VNN G   + P  E+  ED+  +++    SAFH  + 
Sbjct: 61  KEDEIADMIAAAAAEF-GGLDILVNNAGIQHVAPIEEFPPEDWDRIIAVMLTSAFHTIRA 119

Query: 140 AHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVA 199
           A P ++  G   I+ ++SA G+V++   + Y A K  +  L K LA E A+  I  N++ 
Sbjct: 120 ALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIGLTKVLALEVAEHGITVNAIC 179

Query: 200 PWYIRTPFTEPLLGNGKFVDEVKSR---------------TPMGRLGEPKEVSSLVAFLC 244
           P Y+RTP  E      +  D+ K+R                P  R     EV+    +L 
Sbjct: 180 PGYVRTPLVE-----KQIADQAKTRGIPEEQVIREVMLKGQPTKRFVTVDEVAETALYLA 234

Query: 245 MPAASYITGQTVCIDGGFTV 264
             AA+ ITGQ + +DGG+T 
Sbjct: 235 SDAAAQITGQAIVLDGGWTA 254

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score =  136 bits (344), Expect = 3e-39
 Identities = 74/248 (29%), Positives = 119/248 (47%), Gaps = 10/248 (4%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK----GLKVTGSVCD 77
            ALVTG  +G+G A+  EL   G  V     +    N+C      +      +V     D
Sbjct: 4   IALVTGAKRGIGSAIARELLNDGYRVIATYFSG---NDCAKDWFEEYGFTEDQVRLKELD 60

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           V+   +    +  +     G ++I VNN G +        + ++++ V++TN  S F++ 
Sbjct: 61  VTDTEECAEALAEIEEE-EGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVT 119

Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNS 197
           Q     +   G   I+ +SS  G+      T YSA K  M    K LA E A+  I  N 
Sbjct: 120 QPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIGFTKALASEGARYGITVNC 179

Query: 198 VAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVC 257
           +AP YI TP  E +    + +  + ++ PM RLG P+E+++ VAFL   AA +ITG+T+ 
Sbjct: 180 IAPGYIATPMVEQM--GPEVLQSIVNQIPMKRLGTPEEIAAAVAFLVSEAAGFITGETIS 237

Query: 258 IDGGFTVN 265
           I+GG  ++
Sbjct: 238 INGGLYMH 245

Length = 245

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score =  136 bits (345), Expect = 5e-39
 Identities = 86/276 (31%), Positives = 122/276 (44%), Gaps = 39/276 (14%)

Query: 14  NRW-SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETEL-NECIHHLQMKGLKV 71
             W +LQG   +VTGG+ G+GLA+V+EL   GA V        +  +E    +       
Sbjct: 2   QDWLNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQHENYQFVP------ 55

Query: 72  TGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTL-----------EYNAE 120
                DVSS  +    +  +   F G+++  VNN G  +  P L           E N  
Sbjct: 56  ----TDVSSAEEVNHTVAEIIEKF-GRIDGLVNNAG--INIPRLLVDEKDPAGKYELNEA 108

Query: 121 DFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQL 180
            F  + + N +  F + Q     +       IV MSS  G+  +   + Y+ATK A+N  
Sbjct: 109 AFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSCYAATKAALNSF 168

Query: 181 AKNLACEWAKDNIRTNSVAPWYI-----RTPFTEPLLG--NGKFVDEV------KSRTPM 227
            ++ A E  K NIR   VAP  +     RTP  E  L    G  V+++       S  P+
Sbjct: 169 TRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPL 228

Query: 228 GRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFT 263
           GR G+  EV+ LV +L    ASYITG T  I GG T
Sbjct: 229 GRSGKLSEVADLVCYLLSDRASYITGVTTNIAGGKT 264

Length = 266

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score =  135 bits (343), Expect = 6e-39
 Identities = 72/250 (28%), Positives = 111/250 (44%), Gaps = 19/250 (7%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
            L G   LVTGGT+G+G  +       GATV  C R   E  +        G        
Sbjct: 3   DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPETVD--------GRPAEFHAA 54

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           DV    Q   L++ +     G+L++ VNN G S      E +      ++  N  +   +
Sbjct: 55  DVRDPDQVAALVDAIVERH-GRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLV 113

Query: 137 CQLAHPLLRA-SGAASIVLMSSALGIVSAN---VGT-VYSATKGAMNQLAKNLACEWAKD 191
            Q A+ +++   G  SIV + S    VS      GT  Y A K  +  L ++LA EWA  
Sbjct: 114 AQAANAVMQQQPGGGSIVNIGS----VSGRRPSPGTAAYGAAKAGLLNLTRSLAVEWAPK 169

Query: 192 NIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI 251
            +R N+V    +RT  +E   G+ + +  V +  P+GRL  P +++    FL    ASY+
Sbjct: 170 -VRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPLGRLATPADIAWACLFLASDLASYV 228

Query: 252 TGQTVCIDGG 261
           +G  + + GG
Sbjct: 229 SGANLEVHGG 238

Length = 252

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score =  135 bits (342), Expect = 8e-39
 Identities = 76/244 (31%), Positives = 121/244 (49%), Gaps = 11/244 (4%)

Query: 23  ALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRP 82
           A+VTGG  G+G A+   L+  GA+V                +Q  G +  G  C+V+S  
Sbjct: 2   AIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQAIGLECNVTSEQ 61

Query: 83  QRQTLINTVSSLFNGKLNIFVNNVGTSVLKP-TLEYNAEDFSLVMSTNFESAFHLCQLAH 141
             + ++    S F G + I VNN G    KP  +    EDF      N  SAF L QL  
Sbjct: 62  DLEAVVKATVSQF-GGITILVNNAGGGGPKPFDMPMTEEDFEWAFKLNLFSAFRLSQLCA 120

Query: 142 PLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPW 201
           P ++ +G  +I+ +SS            Y ++K A+N + +NLA +     IR N+VAP 
Sbjct: 121 PHMQKAGGGAILNISSMSSENKNVRIAAYGSSKAAVNHMTRNLAFDLGPKGIRVNAVAPG 180

Query: 202 YIRTPFTEPLLGNGKFVDEVKSR----TPMGRLGEPKEVSSLVAFLCMPAASYITGQTVC 257
            ++T     +L       E++      TP+GRLGEP+++++   FLC PA+++++GQ + 
Sbjct: 181 AVKTDALASVL-----TPEIERAMLKHTPLGRLGEPEDIANAALFLCSPASAWVSGQVLT 235

Query: 258 IDGG 261
           + GG
Sbjct: 236 VSGG 239

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score =  135 bits (341), Expect = 9e-39
 Identities = 68/245 (27%), Positives = 110/245 (44%), Gaps = 11/245 (4%)

Query: 20  GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVS 79
           G + LVTG + G+G A    L+  GA V   +R    L+        + L++     DV 
Sbjct: 9   GKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRL-----DVG 63

Query: 80  SRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQ- 138
                       +  F+G     VN  G + L+  L+  AE F  VM+ N   A  + + 
Sbjct: 64  -DDAAIRAALAAAGAFDG----LVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARH 118

Query: 139 LAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSV 198
           +A  ++ A    SIV +SS   +V       Y A+K A++ + + L  E     IR NSV
Sbjct: 119 VARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVLCVELGPHGIRVNSV 178

Query: 199 APWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCI 258
            P    TP       + +    + +  P+GR  E  +V++ + FL   AAS ++G ++ +
Sbjct: 179 NPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILFLLSDAASMVSGVSLPV 238

Query: 259 DGGFT 263
           DGG+T
Sbjct: 239 DGGYT 243

Length = 245

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score =  135 bits (342), Expect = 1e-38
 Identities = 82/263 (31%), Positives = 124/263 (47%), Gaps = 30/263 (11%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATV-------HTCSRTETELNECIHHLQMKGL 69
            L G  A+VTGG   +G AV   L   GA V          +     L E    +     
Sbjct: 3   GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIA---- 58

Query: 70  KVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTN 129
                  D++     +  + TV + F G+++I VN    + L   L  +  D+   +  N
Sbjct: 59  ------TDITDDAAIERAVATVVARF-GRVDILVNL-ACTYLDDGLASSRADWLAALDVN 110

Query: 130 FESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGT----VYSATKGAMNQLAKNLA 185
             SA  L Q AHP L   G A IV  +S    +SA        +Y A+K A+ QL +++A
Sbjct: 111 LVSAAMLAQAAHPHLARGGGA-IVNFTS----ISAKFAQTGRWLYPASKAAIRQLTRSMA 165

Query: 186 CEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFV-DEVKSRT-PMGRLGEPKEVSSLVAFL 243
            + A D IR NSV+P +  +   + L G  +   D V +    +GR+G+P+EV+ +VAFL
Sbjct: 166 MDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLLGRVGDPEEVAQVVAFL 225

Query: 244 CMPAASYITGQTVCIDGGFTVNG 266
           C  AAS++TG    +DGG++  G
Sbjct: 226 CSDAASFVTGADYAVDGGYSALG 248

Length = 261

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score =  132 bits (335), Expect = 9e-38
 Identities = 81/252 (32%), Positives = 112/252 (44%), Gaps = 14/252 (5%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L+G  A+VTG   G+G A    L+  GA V             +  +    L +     D
Sbjct: 1   LEGKVAIVTGAGAGIGAACAARLAREGARVVVADIDGGAAQAVVAQIAGGALALR---VD 57

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTL-EYNAEDFSLVMSTNFESAFHL 136
           V+   Q   L       F G L++ VNN G   L P + + +   +   M+ N    F  
Sbjct: 58  VTDEQQVAALFERAVEEFGG-LDLLVNNAGAMHLTPAIIDTDLAVWDQTMAINLRGTFLC 116

Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTN 196
           C+ A P + A G  SIV +SS  G         Y A+K A+  L + LA E     IR N
Sbjct: 117 CRHAAPRMIARGGGSIVNLSSIAGQSGDPGYGAYGASKAAIRNLTRTLAAELRHAGIRCN 176

Query: 197 SVAPWYIRTPFT-------EPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAAS 249
           ++AP  I TP         E  LG G F   +      GRLG P++V++ V FL    AS
Sbjct: 177 ALAPGLIDTPLLLAKLAGFEGALGPGGFHLLIHQLQ--GRLGRPEDVAAAVVFLLSDDAS 234

Query: 250 YITGQTVCIDGG 261
           +ITGQ +C+DGG
Sbjct: 235 FITGQVLCVDGG 246

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score =  134 bits (338), Expect = 1e-37
 Identities = 90/256 (35%), Positives = 128/256 (50%), Gaps = 16/256 (6%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETE-LNECIHHLQMKGLK---VTG 73
           L+G  AL+TGG  G+G AV    +  GA +      E E  NE    ++ +G+K   + G
Sbjct: 44  LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPG 103

Query: 74  SVCDVSSRPQ--RQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEY-NAEDFSLVMSTNF 130
            V D        +  +  TV  L  G+L+I VNN      + +LE   AE       TN 
Sbjct: 104 DVSD----EAFCKDAVEETVREL--GRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNI 157

Query: 131 ESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAK 190
            S FH+ + A P L+  G+A I+   S  G         YSATKGA++   ++LA    +
Sbjct: 158 YSYFHMTKAALPHLK-QGSA-IINTGSITGYEGNETLIDYSATKGAIHAFTRSLAQSLVQ 215

Query: 191 DNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY 250
             IR N+VAP  I TP   P   + + V +  S TPM R G+P+E++    FL  P +SY
Sbjct: 216 KGIRVNAVAPGPIWTPLI-PSDFDEEKVSQFGSNTPMQRPGQPEELAPAYVFLASPDSSY 274

Query: 251 ITGQTVCIDGGFTVNG 266
           ITGQ + ++GG  VNG
Sbjct: 275 ITGQMLHVNGGVIVNG 290

Length = 290

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score =  133 bits (336), Expect = 1e-37
 Identities = 78/251 (31%), Positives = 127/251 (50%), Gaps = 10/251 (3%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L+   A++TG + G+G A    L+  GA V         ++E +  ++  G K      D
Sbjct: 4   LENKVAVITGASTGIGQASAIALAQEGAYV-LAVDIAEAVSETVDKIKSNGGKAKAYHVD 62

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTL-EYNAEDFSLVMSTNFESAFHL 136
           +S   Q +   + +   F G++++  NN G       + EY  + F  +M+ +    F +
Sbjct: 63  ISDEQQVKDFASEIKEQF-GRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLM 121

Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTN 196
            ++  PL+   G  SI+  SS  G  +    + Y+A KGA+    K++A E+ +D IR N
Sbjct: 122 TKMLLPLMMEQGG-SIINTSSFSGQAADLYRSGYNAAKGAVINFTKSIAIEYGRDGIRAN 180

Query: 197 SVAPWYIRTPFTEPLLGNG------KFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY 250
           ++AP  I TP  + L G         F +  K  TP+GRLG+P+EV+ LV FL    +S+
Sbjct: 181 AIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDSSF 240

Query: 251 ITGQTVCIDGG 261
           ITG+T+ IDGG
Sbjct: 241 ITGETIRIDGG 251

Length = 272

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score =  132 bits (333), Expect = 2e-37
 Identities = 73/248 (29%), Positives = 121/248 (48%), Gaps = 11/248 (4%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L G  A++TG   G+G  +    +  GA+V          N  +  +Q  G +     CD
Sbjct: 9   LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCD 68

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           ++S  +   L +   S   GK++I VNN G    KP  +    DF      N  S FHL 
Sbjct: 69  ITSEQELSALADFALSKL-GKVDILVNNAGGGGPKP-FDMPMADFRRAYELNVFSFFHLS 126

Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNS 197
           QL  P +  +G   I+ ++S          T Y+++K A + L +N+A +  + NIR N 
Sbjct: 127 QLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNG 186

Query: 198 VAPWYIRTPFTEPLLGNGKFVDEVKSR----TPMGRLGEPKEVSSLVAFLCMPAASYITG 253
           +AP  I T   + ++       E++ +    TP+ RLG+P+++++   FLC PAAS+++G
Sbjct: 187 IAPGAILTDALKSVI-----TPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSG 241

Query: 254 QTVCIDGG 261
           Q + + GG
Sbjct: 242 QILTVSGG 249

Length = 255

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score =  130 bits (330), Expect = 5e-37
 Identities = 78/256 (30%), Positives = 122/256 (47%), Gaps = 26/256 (10%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           LQG TAL+TGGT G+GL    +    GA V    R    L      L    L +     D
Sbjct: 4   LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGD 63

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           V++  Q+  L   ++  F G+L+    N G +   P  +++   F    +TN +  + L 
Sbjct: 64  VAA--QKA-LAQALAEAF-GRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLI 119

Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVG----TVYSATKGAMNQLAKNLACEWAKDNI 193
           Q   PLL  +  ASIVL  S    ++A++G    +VY+A+K A+  LAK L+ E     I
Sbjct: 120 QALLPLL--ANPASIVLNGS----INAHIGMPNSSVYAASKAALLSLAKTLSGELLPRGI 173

Query: 194 RTNSVAPWYIRTPFTEPLLGN--------GKFVDEVKSRTPMGRLGEPKEVSSLVAFLCM 245
           R N+V+P     P   PL G              ++++  P+GR G P+E++  V +L  
Sbjct: 174 RVNAVSP----GPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAVLYLAS 229

Query: 246 PAASYITGQTVCIDGG 261
             +++I G  + +DGG
Sbjct: 230 DESAFIVGSEIIVDGG 245

Length = 249

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score =  130 bits (328), Expect = 8e-37
 Identities = 78/252 (30%), Positives = 122/252 (48%), Gaps = 12/252 (4%)

Query: 16  WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSV 75
           +SL+G  ALVTG   GLG  +   L+  GA +    R+E   +E    ++  G +     
Sbjct: 1   FSLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE--PSETQQQVEALGRRFLSLT 58

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
            D+S     + L+++    F G ++I VNN G        E++ +D+  VM+ N +S F 
Sbjct: 59  ADLSDIEAIKALVDSAVEEF-GHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFF 117

Query: 136 LCQL-AHPLLRASGAASIVLMSSAL----GIVSANVGTVYSATKGAMNQLAKNLACEWAK 190
           L Q  A   L+      I+ ++S L    GI   +    Y+A+K A+  L K LA EWA 
Sbjct: 118 LTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPS----YTASKHAVAGLTKLLANEWAA 173

Query: 191 DNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY 250
             I  N++AP Y+ T  T+ L  +      +  R P GR G P ++     FL   A+ Y
Sbjct: 174 KGINVNAIAPGYMATNNTQALRADEDRNAAILERIPAGRWGTPDDIGGPAVFLASSASDY 233

Query: 251 ITGQTVCIDGGF 262
           + G T+ +DGG+
Sbjct: 234 VNGYTLAVDGGW 245

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score =  130 bits (328), Expect = 1e-36
 Identities = 77/249 (30%), Positives = 124/249 (49%), Gaps = 3/249 (1%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRT-ETELNECIHHLQMKGLKVTGSV 75
            L+G   ++TGG+ GLG A+        A V    R+ E E N+    ++  G +     
Sbjct: 4   DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVK 63

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
            DV+       LI T    F G L++ +NN G     P+ E + ED++ V++TN   AF 
Sbjct: 64  GDVTVESDVVNLIQTAVKEF-GTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFL 122

Query: 136 LCQLA-HPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIR 194
             + A    +      +I+ MSS    +   +   Y+A+KG +  + + LA E+A   IR
Sbjct: 123 GSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAASKGGVKLMTETLAMEYAPKGIR 182

Query: 195 TNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ 254
            N++ P  I TP       + K   +V+S  PMG +G+P+E++++ A+L    ASY+TG 
Sbjct: 183 VNNIGPGAINTPINAEKFADPKQRADVESMIPMGYIGKPEEIAAVAAWLASSEASYVTGI 242

Query: 255 TVCIDGGFT 263
           T+  DGG T
Sbjct: 243 TLFADGGMT 251

Length = 261

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score =  129 bits (327), Expect = 2e-36
 Identities = 79/251 (31%), Positives = 119/251 (47%), Gaps = 9/251 (3%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGL---KVTGS 74
           L G  A++TG + G+G       + LGA +    R    L E        G+   K+   
Sbjct: 1   LSGKVAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLV 60

Query: 75  VCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAF 134
           V D++    +  +I+T  + F G+L+I VNN G        + + E++  VM+ N  +  
Sbjct: 61  VADLTEEEGQDRIISTTLAKF-GRLDILVNNAGILAKGGGEDQDIEEYDKVMNLNLRAVI 119

Query: 135 HLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIR 194
           +L +LA P L  +    IV +SS  G  S      Y  +K A++Q  +  A E A   +R
Sbjct: 120 YLTKLAVPHLIKT-KGEIVNVSSVAGGRSFPGVLYYCISKAALDQFTRCTALELAPKGVR 178

Query: 195 TNSVAPWYIRTPFTE----PLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY 250
            NSV+P  I T F      P     KF+   K   P+GR G   EV+  +AFL   A+S+
Sbjct: 179 VNSVSPGVIVTGFHRRMGMPEEQYIKFLSRAKETHPLGRPGTVDEVAEAIAFLASDASSF 238

Query: 251 ITGQTVCIDGG 261
           ITGQ + +DGG
Sbjct: 239 ITGQLLPVDGG 249

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score =  128 bits (324), Expect = 4e-36
 Identities = 79/252 (31%), Positives = 123/252 (48%), Gaps = 19/252 (7%)

Query: 23  ALVTGGTKGLGLAVVEELSMLGATV--------HTCSRTETELNECIHHLQMKGLKVTGS 74
           A +TG   GLG A+   ++  GA V                E+N   H   +       +
Sbjct: 2   AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINA-AHGEGV----AFAA 56

Query: 75  VCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAF 134
           V DV+   Q Q L+   +    G L++ VNN G        +   +++  VM+ N ES F
Sbjct: 57  VQDVTDEAQWQALLAQAADAMGG-LSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIF 115

Query: 135 HLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKD--N 192
             C+ A P LRAS  ASIV +SS     +    T Y+A+K A+  L K++A + A+   +
Sbjct: 116 LGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVASLTKSIALDCARRGLD 175

Query: 193 IRTNSVAPWYIRTPFTEPL---LGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAAS 249
           +R NS+ P +IRT   +P+   LG  +   ++    P+GRLGEP +V+  V +L    + 
Sbjct: 176 VRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLASDESR 235

Query: 250 YITGQTVCIDGG 261
           ++TG  + IDGG
Sbjct: 236 FVTGAELVIDGG 247

Length = 251

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score =  128 bits (323), Expect = 5e-36
 Identities = 71/251 (28%), Positives = 119/251 (47%), Gaps = 15/251 (5%)

Query: 19  QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDV 78
            G  AL+T   +G+G A+    +  GA V       T++NE       +G  +T  V DV
Sbjct: 1   DGKVALITAAAQGIGRAIALAFAREGANVIA-----TDINEEKLKELERGPGITTRVLDV 55

Query: 79  SSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQ 138
           + + Q   L         G++++  N  G       L+   +D+   M+ N  S + + +
Sbjct: 56  TDKEQVAALAKEE-----GRIDVLFNCAGFVHHGSILDCEDDDWDFAMNLNVRSMYLMIK 110

Query: 139 LAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAKDNIRTNS 197
              P + A    SI+ MSS    +       VYS TK A+  L K++A ++A+  IR N+
Sbjct: 111 AVLPKMLARKDGSIINMSSVASSIKGVPNRFVYSTTKAAVIGLTKSVAADFAQQGIRCNA 170

Query: 198 VAPWYIRTPFTEPLLGNGKFVDEVK----SRTPMGRLGEPKEVSSLVAFLCMPAASYITG 253
           + P  + TP  E  +      +E      +R P+GRL  P+EV++L  +L    ++Y+TG
Sbjct: 171 ICPGTVDTPSLEERIQAQPDPEEALKAFAARQPLGRLATPEEVAALAVYLASDESAYVTG 230

Query: 254 QTVCIDGGFTV 264
             V IDGG+++
Sbjct: 231 TAVVIDGGWSL 241

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score =  128 bits (323), Expect = 6e-36
 Identities = 74/263 (28%), Positives = 115/263 (43%), Gaps = 29/263 (11%)

Query: 16  WSLQGMTALVTGGTKGLGLAVVEELSMLGATV-------HTCSRTETELNECIHHLQMKG 68
             L+G  A+VTG   G G  +    +  GA V           R   ++ E    +Q   
Sbjct: 1   MRLEGKVAIVTGAGSGFGEGIARRFAQEGARVVIADINADGAERVAADIGEAAIAIQA-- 58

Query: 69  LKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVL-KPTLEYNAEDFSLVMS 127
                   DV+ R   + ++    S F G+L+I VNN G +   KP LE + E+F  V +
Sbjct: 59  --------DVTKRADVEAMVEAALSKF-GRLDILVNNAGITHRNKPMLEVDEEEFDRVFA 109

Query: 128 TNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACE 187
            N +S +   Q   P +   G   I+ ++S  G+      T Y+A+KG +    K +A E
Sbjct: 110 VNVKSIYLSAQALVPHMEEQGGGVIINIASTAGLRPRPGLTWYNASKGWVVTATKAMAVE 169

Query: 188 WAKDNIRTNSVAPWYIRTPFTEPLLGN------GKFVDEVKSRTPMGRLGEPKEVSSLVA 241
            A  NIR N + P    TP     +G        KF   +    P+GRL  P ++++   
Sbjct: 170 LAPRNIRVNCLCPVAGETPLLSMFMGEDTPENRAKFRATI----PLGRLSTPDDIANAAL 225

Query: 242 FLCMPAASYITGQTVCIDGGFTV 264
           +L    AS+ITG  + +DGG  +
Sbjct: 226 YLASDEASFITGVALEVDGGRCI 248

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score =  127 bits (321), Expect = 1e-35
 Identities = 69/261 (26%), Positives = 114/261 (43%), Gaps = 23/261 (8%)

Query: 20  GMTALVTGGTKGLGLAVVEELSMLGATV-------HTCSRTETELNECIHHLQMKGLKVT 72
           G  ALVTG T G+GL +   L+  GA +                     H     G+KV 
Sbjct: 2   GKVALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKH-----GVKVL 56

Query: 73  GSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFES 132
               D+S     + ++      F G ++I VNN G   + P  ++  E +  +++ N  +
Sbjct: 57  YHGADLSKPAAIEDMVAYAQRQF-GGVDILVNNAGIQHVAPIEDFPTEKWDAIIALNLSA 115

Query: 133 AFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDN 192
            FH  +LA P ++  G   I+ ++S  G+V++   + Y A K  +  L K +A E A   
Sbjct: 116 VFHTTRLALPHMKKQGWGRIINIASVHGLVASANKSAYVAAKHGVVGLTKVVALETAGTG 175

Query: 193 IRTNSVAPWYIRTPFTE---PLLGNGKFVDE-------VKSRTPMGRLGEPKEVSSLVAF 242
           +  N++ P ++ TP  E     L     V +       +  + P  +   P+++     F
Sbjct: 176 VTCNAICPGWVLTPLVEKQISALAQKNGVPQEQAARELLLEKQPSKQFVTPEQLGDTAVF 235

Query: 243 LCMPAASYITGQTVCIDGGFT 263
           L   AAS ITG  V +DGG+T
Sbjct: 236 LASDAASQITGTAVSVDGGWT 256

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  123 bits (311), Expect = 3e-34
 Identities = 76/247 (30%), Positives = 115/247 (46%), Gaps = 23/247 (9%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTE-TELNECIHHLQMKGLKVTGSVCDVSS 80
           T L+TG   G+GLA        GA V+   + +  +L+   H LQ+          D+S 
Sbjct: 7   TVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDLSGNFHFLQL----------DLSD 56

Query: 81  RPQRQTLINTVSSLFNGKLNIFVNNVGTSVL---KPTLEYNAEDFSLVMSTNFESAFHLC 137
               + L + V       ++I  N  G  +L   KP L+ + E++  +  TN  S F L 
Sbjct: 57  --DLEPLFDWV-----PSVDILCNTAG--ILDDYKPLLDTSLEEWQHIFDTNLTSTFLLT 107

Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNS 197
           +   P +    +  I+ M S    V+   G  Y+A+K A+    K LA ++AKD I+   
Sbjct: 108 RAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQLALDYAKDGIQVFG 167

Query: 198 VAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVC 257
           +AP  ++TP T      G   D V   TP+ R  EP+EV+ L  FL    A Y+ G  V 
Sbjct: 168 IAPGAVKTPMTAADFEPGGLADWVARETPIKRWAEPEEVAELTLFLASGKADYMQGTIVP 227

Query: 258 IDGGFTV 264
           IDGG+T+
Sbjct: 228 IDGGWTL 234

Length = 235

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score =  123 bits (311), Expect = 4e-34
 Identities = 72/252 (28%), Positives = 112/252 (44%), Gaps = 2/252 (0%)

Query: 14  NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTG 73
           N + L G  ALVTG ++G+G A+ + L+  GA V   SR           +   G K   
Sbjct: 2   NLFDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEA 61

Query: 74  SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTS-VLKPTLEYNAEDFSLVMSTNFES 132
             C +    Q   L   +     G+L+I VNN   +      L+ +   F   +  N   
Sbjct: 62  LACHIGEMEQIDALFAHIRERH-GRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRG 120

Query: 133 AFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDN 192
            F +   A  L++  G  SIV ++S  G+   +   +YS TK A+  + K  A E A   
Sbjct: 121 YFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKAAVISMTKAFAKECAPFG 180

Query: 193 IRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT 252
           IR N++ P    T F   L  N   + +  +  P+ R  EP E++  V +L   A+SY T
Sbjct: 181 IRVNALLPGLTDTKFASALFKNDAILKQALAHIPLRRHAEPSEMAGAVLYLASDASSYTT 240

Query: 253 GQTVCIDGGFTV 264
           G+ + +DGG+  
Sbjct: 241 GECLNVDGGYLS 252

Length = 252

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score =  123 bits (311), Expect = 4e-34
 Identities = 74/251 (29%), Positives = 117/251 (46%), Gaps = 12/251 (4%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
            ALVTG T G+GLA+   L   G  V  C+R E  L   +  L+  G++  G  CDV S 
Sbjct: 5   VALVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREAGVEADGRTCDVRSV 64

Query: 82  PQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQ--L 139
           P+ + L+    + + G +++ VNN G S    T E   E +  V+ TN    F + +  L
Sbjct: 65  PEIEALVAAAVARY-GPIDVLVNNAGRSGGGATAELADELWLDVVETNLTGVFRVTKEVL 123

Query: 140 AHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVA 199
               +   G   I+ ++S  G         YSA+K  +    K L  E A+  I  N+V 
Sbjct: 124 KAGGMLERGTGRIINIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVC 183

Query: 200 PWYIRTPFTEPL---------LGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY 250
           P ++ TP    +         +   +  D + +R P+GR   P+EV+ +VA+L    A+ 
Sbjct: 184 PGFVETPMAASVREHYADIWEVSTEEAFDRITARVPLGRYVTPEEVAGMVAYLIGDGAAA 243

Query: 251 ITGQTVCIDGG 261
           +T Q + + GG
Sbjct: 244 VTAQALNVCGG 254

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score =  123 bits (310), Expect = 6e-34
 Identities = 63/257 (24%), Positives = 112/257 (43%), Gaps = 21/257 (8%)

Query: 19  QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQ-MKGLKVTGSVCD 77
           +    L+TG    +G A  + L   GA +         L +    L  +   +V     D
Sbjct: 1   EDKIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKNRVIALELD 60

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSV---LKPTLEYNAEDFSLVMSTNFESAF 134
           ++S+   + LI +    F G+++I +NN   S         E+  E ++ V++ N   AF
Sbjct: 61  ITSKESIKELIESYLEKF-GRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVNLGGAF 119

Query: 135 HLCQLAHPLLRASGAASIVLMSSALGIVSANV----------GTVYSATKGAMNQLAKNL 184
              Q    L +  G  SI+ ++S  G+++ +              YS  K  +  L K L
Sbjct: 120 LCSQAFIKLFKKQGKGSIINIASIYGVIAPDFRIYENTQMYSPVEYSVIKAGIIHLTKYL 179

Query: 185 ACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLC 244
           A  +A   IR N+++P  I            +F+++   + P+ R+  P+++   + FL 
Sbjct: 180 AKYYADTGIRVNAISPGGILNNQPS------EFLEKYTKKCPLKRMLNPEDLRGAIIFLL 233

Query: 245 MPAASYITGQTVCIDGG 261
             A+SY+TGQ + IDGG
Sbjct: 234 SDASSYVTGQNLVIDGG 250

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score =  123 bits (310), Expect = 7e-34
 Identities = 72/251 (28%), Positives = 109/251 (43%), Gaps = 12/251 (4%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCS-RTETELNECIHHLQMKGLKVTGSVCDVSS 80
            A++TG  +G+G A+ E L+  G  +       E      I  +   G        DV+ 
Sbjct: 4   VAIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISEAGYNAVAVGADVTD 63

Query: 81  RPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLA 140
           +   + LI+     F G  ++ VNN G + + P L    ED   V + N        Q A
Sbjct: 64  KDDVEALIDQAVEKF-GSFDVMVNNAGIAPITPLLTITEEDLKKVYAVNVFGVLFGIQAA 122

Query: 141 H-PLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVA 199
                +      I+  SS  G+        YSA+K A+  L +  A E A   I  N+ A
Sbjct: 123 ARQFKKLGHGGKIINASSIAGVQGFPNLGAYSASKFAVRGLTQTAAQELAPKGITVNAYA 182

Query: 200 PWYIRTPFTE-------PLLGN--GKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY 250
           P  ++T   +        + G   G+   E  S  P+GRL EP++V+ LV+FL    + Y
Sbjct: 183 PGIVKTEMWDYIDEEVGEIAGKPEGEGFAEFSSSIPLGRLSEPEDVAGLVSFLASEDSDY 242

Query: 251 ITGQTVCIDGG 261
           ITGQT+ +DGG
Sbjct: 243 ITGQTILVDGG 253

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score =  122 bits (308), Expect = 7e-34
 Identities = 81/252 (32%), Positives = 123/252 (48%), Gaps = 9/252 (3%)

Query: 16  WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSV 75
           + L G  AL+TG + G+G  V       GA V   +R    L +    +   G KV    
Sbjct: 5   FDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVC 64

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
           CDVS   Q  ++++ V++   G ++I V N G   + P L+   E+F  + +TN    F 
Sbjct: 65  CDVSQHQQVTSMLDQVTAELGG-IDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFL 123

Query: 136 LCQLAHPLLRASGAASIVL----MSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKD 191
             Q A   +   G   +++    MS  +  V   V   Y A+K A+  L K +A E A  
Sbjct: 124 TAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSH-YCASKAAVIHLTKAMAVELAPH 182

Query: 192 NIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI 251
            IR NSV+P YI T   EP     ++    + + P+GRLG P+E++ L  +L   A+SY+
Sbjct: 183 KIRVNSVSPGYILTELVEPY---TEYQPLWEPKIPLGRLGRPEELAGLYLYLASEASSYM 239

Query: 252 TGQTVCIDGGFT 263
           TG  + IDGG+T
Sbjct: 240 TGSDIVIDGGYT 251

Length = 253

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score =  122 bits (309), Expect = 8e-34
 Identities = 79/253 (31%), Positives = 118/253 (46%), Gaps = 9/253 (3%)

Query: 16  WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCS-RTETELNECIHHLQMKGLKVTGS 74
           + L G  A VTG   G+G  +   L+  GA V     RT+  L E   H++  G +    
Sbjct: 4   FDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQI 63

Query: 75  VCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAF 134
             DV+S+   +  +    +   G L + VN  G +   P  E   E +  VM  N    F
Sbjct: 64  AADVTSKADLRAAVARTEAEL-GALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVF 122

Query: 135 HLCQLAHPLLRASGAASIVLMSSALGIVSANVGTV---YSATKGAMNQLAKNLACEWAKD 191
             CQ     +  +G  SIV ++S  GI+  N G +   Y+A+K  +  L+K+LA EW   
Sbjct: 123 LSCQAEARAMLENGGGSIVNIASMSGIIV-NRGLLQAHYNASKAGVIHLSKSLAMEWVGR 181

Query: 192 NIRTNSVAPWYIRTPF-TEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY 250
            IR NS++P Y  TP  T P + +       + +TPM R+ +  E+     FL   AAS+
Sbjct: 182 GIRVNSISPGYTATPMNTRPEMVHQ--TKLFEEQTPMQRMAKVDEMVGPAVFLLSDAASF 239

Query: 251 ITGQTVCIDGGFT 263
            TG  + +DGGF 
Sbjct: 240 CTGVDLLVDGGFV 252

Length = 254

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score =  122 bits (309), Expect = 1e-33
 Identities = 75/267 (28%), Positives = 118/267 (44%), Gaps = 23/267 (8%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           SL+   A++TGGT  LG A+   L+  GA V    R + + ++    +   G +      
Sbjct: 2   SLKNKVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITALGGRAIALAA 61

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTL--------------EYNAEDF 122
           DV  R   +     + + F G ++I +N  G +    T               + + E +
Sbjct: 62  DVLDRASLERAREEIVAQF-GTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLDEEGW 120

Query: 123 SLVMSTNFESAFHLCQ-LAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLA 181
             V   N   +F   Q     +L   G  SI+ +SS            YSA K A++   
Sbjct: 121 EFVFDLNLNGSFLPSQVFGKDMLEQKGG-SIINISSMNAFSPLTKVPAYSAAKAAVSNFT 179

Query: 182 KNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN--GKFVDEVK---SRTPMGRLGEPKEV 236
           + LA E+A   +R N++AP +  TP    LL N  G + D       RTPMGR G+P+E+
Sbjct: 180 QWLAVEFATTGVRVNAIAPGFFVTPQNRKLLINPDGSYTDRSNKILGRTPMGRFGKPEEL 239

Query: 237 SSLVAFLC-MPAASYITGQTVCIDGGF 262
              + FL    A+S++TG  + +DGGF
Sbjct: 240 LGALLFLASEKASSFVTGVVIPVDGGF 266

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score =  121 bits (306), Expect = 2e-33
 Identities = 76/254 (29%), Positives = 115/254 (45%), Gaps = 11/254 (4%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
            ALVTGG +G+G  + E L+  G  V      E    E    +   G K      DVS +
Sbjct: 2   VALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDK 61

Query: 82  PQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAH 141
            Q  + I+  +  F G  ++ VNN G + + P LE   E+   V + N +      Q A 
Sbjct: 62  DQVFSAIDQAAEKF-GGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAA 120

Query: 142 PLLRASG-AASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAP 200
              +  G    I+  +S  G     + + YS+TK A+  L +  A E A   I  N+  P
Sbjct: 121 RQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCP 180

Query: 201 WYIRTPFTEPLLG-----NGKFV----DEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI 251
             ++TP  E +        GK +    +E  S   +GR  EP++V+ LV+FL    + YI
Sbjct: 181 GIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFLASEDSDYI 240

Query: 252 TGQTVCIDGGFTVN 265
           TGQ++ +DGG   N
Sbjct: 241 TGQSILVDGGMVYN 254

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score =  121 bits (305), Expect = 3e-33
 Identities = 79/250 (31%), Positives = 116/250 (46%), Gaps = 16/250 (6%)

Query: 24  LVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQ--MKGLKVTGSVCDVSSR 81
           L+TGG  GLGLA    L+  GA +      E  L      L       +V     DVS  
Sbjct: 7   LITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEVLLIKADVSDE 66

Query: 82  PQRQTLINTVSSLFNGKLNIFVNNVGTSVLK-PTLEYNAEDFSLVMSTNFESAFHLCQLA 140
            Q +  ++     F G+++ F NN G    +  T ++ A++F  V+S N    F+  +  
Sbjct: 67  AQVEAYVDATVEQF-GRIDGFFNNAGIEGKQNLTEDFGADEFDKVVSINLRGVFYGLEKV 125

Query: 141 HPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAP 200
             ++R  G+  IV  +S  GI      + Y+A K  +  L +N A E+ +  IR N++AP
Sbjct: 126 LKVMREQGSGMIVNTASVGGIRGVGNQSGYAAAKHGVVGLTRNSAVEYGQYGIRINAIAP 185

Query: 201 WYIRTPFTEPLLGNGKFVD---------EVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI 251
             I TP  E   G+ K +          E  S  PM R GEP+EV+++VAFL    A Y+
Sbjct: 186 GAILTPMVE---GSLKQLGPENPEEAGEEFVSVNPMKRFGEPEEVAAVVAFLLSDDAGYV 242

Query: 252 TGQTVCIDGG 261
               V IDGG
Sbjct: 243 NAAVVPIDGG 252

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score =  121 bits (304), Expect = 4e-33
 Identities = 74/256 (28%), Positives = 120/256 (46%), Gaps = 22/256 (8%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L+   A+VTGG++G+G AVV  L   G+ V      E   N+  +       K      D
Sbjct: 4   LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYNDVDY------FK-----VD 52

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           VS++ Q    I+ V S + G+++I VNN G            +++  +++ N    F + 
Sbjct: 53  VSNKEQVIKGIDYVISKY-GRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMS 111

Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNS 197
           +   P +       I+ ++S            Y  +K A+  L +++A ++A   IR  +
Sbjct: 112 KYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSIAVDYAP-TIRCVA 170

Query: 198 VAPWYIRTPFTE--PLLGNGKFVDEVKSRT-------PMGRLGEPKEVSSLVAFLCMPAA 248
           V P  IRTP  E    L  GK  + V+ +        PM R+G+P+EV+ +VAFL    A
Sbjct: 171 VCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVVAFLASDLA 230

Query: 249 SYITGQTVCIDGGFTV 264
           S+ITG+ V +DGG   
Sbjct: 231 SFITGECVTVDGGLRA 246

Length = 258

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score =  119 bits (301), Expect = 9e-33
 Identities = 76/254 (29%), Positives = 119/254 (46%), Gaps = 18/254 (7%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELN----ECIHHLQMKGLKVT 72
              G  ALVTG  KG+G A V+ L+  GA V   SRT+ +L+    EC          + 
Sbjct: 4   DFAGKRALVTGAGKGIGRATVKALAKAGARVVAVSRTQADLDSLVRECPG--------IE 55

Query: 73  GSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFES 132
               D+S     +  + +V     G +++ VNN   ++L+P LE   E F      N  +
Sbjct: 56  PVCVDLSDWDATEEALGSV-----GPVDLLVNNAAVAILQPFLEVTKEAFDRSFDVNVRA 110

Query: 133 AFHLCQLAHPLLRASGA-ASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKD 191
             H+ Q+    + A G   SIV +SS     +    TVY +TK A++ L K +A E    
Sbjct: 111 VIHVSQIVARGMIARGVPGSIVNVSSQASQRALTNHTVYCSTKAALDMLTKVMALELGPH 170

Query: 192 NIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI 251
            IR NSV P  + T        + +   ++ +R P+G+  E ++V + + FL    +S  
Sbjct: 171 KIRVNSVNPTVVMTDMGRDNWSDPEKAKKMLNRIPLGKFAEVEDVVNAILFLLSDKSSMT 230

Query: 252 TGQTVCIDGGFTVN 265
           TG T+ +DGGF  +
Sbjct: 231 TGSTLPVDGGFLAS 244

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score =  119 bits (300), Expect = 2e-32
 Identities = 77/261 (29%), Positives = 120/261 (45%), Gaps = 29/261 (11%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETE-LNECIHHLQMKGLKVTGSVC 76
           L G  ALVTGGTKG+G A V  L   GA V T +R+  + L E +  +            
Sbjct: 7   LAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDLPEGVEFVA----------A 56

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNA---EDFSLVMSTNFESA 133
           D+++      +   V     G ++I V+ +G S   P   + A   E++   ++ N  +A
Sbjct: 57  DLTTAEGCAAVARAVLERL-GGVDILVHVLGGSSA-PAGGFAALTDEEWQDELNLNLLAA 114

Query: 134 FHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEWAKDN 192
             L +   P + A G+  I+ ++S    +     T  Y+A K A++  +K+L+ E A   
Sbjct: 115 VRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAAAKAALSTYSKSLSKEVAPKG 174

Query: 193 IRTNSVAPWYIRTPFTEPLL-----GNGKFVDEVKSRT-------PMGRLGEPKEVSSLV 240
           +R N+V+P +I T     L        G   +  K          P+GR  EP+EV+ L+
Sbjct: 175 VRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEEVAELI 234

Query: 241 AFLCMPAASYITGQTVCIDGG 261
           AFL    A+ ITG    IDGG
Sbjct: 235 AFLASDRAASITGTEYVIDGG 255

Length = 260

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score =  118 bits (298), Expect = 3e-32
 Identities = 70/265 (26%), Positives = 116/265 (43%), Gaps = 36/265 (13%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQ-MKGLKVTGSV- 75
           L G  A++TGG  G+G A     +  GA V             I  +    G  V   + 
Sbjct: 2   LDGKVAIITGGASGIGEATARLFAKHGARV------------VIADIDDDAGQAVAAELG 49

Query: 76  --------CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPT--LEYNAEDFSLV 125
                   CDV+     +  ++T  + F G+L+I  NN G         LE + E+F  V
Sbjct: 50  DPDISFVHCDVTVEADVRAAVDTAVARF-GRLDIMFNNAGVLGAPCYSILETSLEEFERV 108

Query: 126 MSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLA 185
           +  N   AF   + A  ++  +   SIV ++S  G+V       Y+A+K A+  L ++ A
Sbjct: 109 LDVNVYGAFLGTKHAARVMIPAKKGSIVSVASVAGVVGGLGPHAYTASKHAVLGLTRSAA 168

Query: 186 CEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDE-------VKSRTPMGRLGEPKEVSS 238
            E  +  IR N V+P+ + T    PLL  G  V++         +    G    P+++++
Sbjct: 169 TELGEHGIRVNCVSPYGVAT----PLLTAGFGVEDEAIEEAVRGAANLKGTALRPEDIAA 224

Query: 239 LVAFLCMPAASYITGQTVCIDGGFT 263
            V +L    + Y++GQ + +DGG T
Sbjct: 225 AVLYLASDDSRYVSGQNLVVDGGLT 249

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score =  118 bits (298), Expect = 3e-32
 Identities = 69/251 (27%), Positives = 109/251 (43%), Gaps = 11/251 (4%)

Query: 20  GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVS 79
           G  ALVTGG  G+GLA+ + L+  GA V           +     Q    +  G  CDV+
Sbjct: 1   GKVALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIAEKVAEAAQGGP-RALGVQCDVT 59

Query: 80  SRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQL 139
           S  Q Q+        F G L+I V+N G +   P  E + ED++  M  N    F + + 
Sbjct: 60  SEAQVQSAFEQAVLEFGG-LDIVVSNAGIATSSPIAETSLEDWNRSMDINLTGHFLVSRE 118

Query: 140 AHPLLRASGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEWAKDNIRTNSV 198
           A  ++++ G    ++ +++   V+       YSA K A   LA+ LA E  +D IR N+V
Sbjct: 119 AFRIMKSQGIGGNIVFNASKNAVAPGPNAAAYSAAKAAEAHLARCLALEGGEDGIRVNTV 178

Query: 199 APWYIRTP---FTEPLLGN-----GKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY 250
            P  +      +            G   +E ++R  + R   P++V+  V  +       
Sbjct: 179 NPDAVFRGSKIWEGVWRAARAKAYGLLEEEYRTRNLLKREVLPEDVAEAVVAMASEDFGK 238

Query: 251 ITGQTVCIDGG 261
            TG  V +DGG
Sbjct: 239 TTGAIVTVDGG 249

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score =  118 bits (296), Expect = 6e-32
 Identities = 72/262 (27%), Positives = 111/262 (42%), Gaps = 28/262 (10%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSV-- 75
            +G   +VTG  +G+G  V E L+  GA V    R+E      +H +  + L    +   
Sbjct: 2   FEGKVVVVTGAAQGIGRGVAERLAGEGARVLLVDRSEL-----VHEVLAEILAAGDAAHV 56

Query: 76  --CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVL-KPTLEYNAEDFSLVMSTNFES 132
              D+ +    Q ++      F G++++ +NNVG ++  KP   Y  E     +  +   
Sbjct: 57  HTADLETYAGAQGVVRAAVERF-GRVDVLINNVGGTIWAKPYEHYEEEQIEAEIRRSLFP 115

Query: 133 AFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEWAKD 191
               C+   P +       IV +SS   I +  +  + YSA KG +N L  +LA E A+D
Sbjct: 116 TLWCCRAVLPHMLERQQGVIVNVSS---IATRGIYRIPYSAAKGGVNALTASLAFEHARD 172

Query: 192 NIRTNSVAPWYIRTPF------------TEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSL 239
            IR N+VAP     P              E +      VD+    + MGR G   E    
Sbjct: 173 GIRVNAVAPGGTEAPPRKIPRNAAPMSEQEKVWYQR-IVDQTLDSSLMGRYGTIDEQVRA 231

Query: 240 VAFLCMPAASYITGQTVCIDGG 261
           + FL    ASYITG  + + GG
Sbjct: 232 ILFLASDEASYITGTVLPVGGG 253

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  117 bits (295), Expect = 1e-31
 Identities = 65/258 (25%), Positives = 116/258 (44%), Gaps = 12/258 (4%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           +L G TA+VTG   G+G  +  EL+  GA V      +   N     +   G K  G   
Sbjct: 4   NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAM 63

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           DV++       I+ V+  F G ++I V+N G  ++ P   Y+  D+  + + + + AF  
Sbjct: 64  DVTNEDAVNAGIDKVAERF-GSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLT 122

Query: 137 CQLAHP-LLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRT 195
            + A   + +      ++ M S     ++ + + Y   K  +  LA+ LA E AK N+R+
Sbjct: 123 TKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRS 182

Query: 196 NSVAPWYIRTPFTEPLLGN-----GKFVDEVKSR-----TPMGRLGEPKEVSSLVAFLCM 245
           + V P ++RTP  +  +       G   +EV  +     T  G     ++V+  V FL  
Sbjct: 183 HVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLFLSS 242

Query: 246 PAASYITGQTVCIDGGFT 263
             ++ +TGQ+  +  G+ 
Sbjct: 243 FPSAALTGQSFVVSHGWF 260

Length = 262

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score =  116 bits (292), Expect = 2e-31
 Identities = 76/255 (29%), Positives = 123/255 (48%), Gaps = 18/255 (7%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
             G  ALVTG ++G+G A+   L+  G       +R+     E    ++  G K      
Sbjct: 2   FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKA 61

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           +V    + + +   +   F G+L++FVNN  + VL+P +E     +   M+ N ++    
Sbjct: 62  NVGDVEKIKEMFAQIDEEF-GRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFC 120

Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSA--NVGTVYSATKGAMNQLAKNLACEWAKDNIR 194
            Q A  L+   G   I+ +SS LG +    N  TV   +K A+  L + LA E A   I 
Sbjct: 121 AQEAAKLMEKVGGGKIISLSS-LGSIRYLENYTTV-GVSKAALEALTRYLAVELAPKGIA 178

Query: 195 TNSVAPWYIRT------PFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAA 248
            N+V+   + T      P  E LL      ++ +++TP GR+ EP++V++ V FLC P A
Sbjct: 179 VNAVSGGAVDTDALKHFPNREELL------EDARAKTPAGRMVEPEDVANAVLFLCSPEA 232

Query: 249 SYITGQTVCIDGGFT 263
             I GQT+ +DGG +
Sbjct: 233 DMIRGQTIIVDGGRS 247

Length = 250

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score =  116 bits (292), Expect = 2e-31
 Identities = 72/263 (27%), Positives = 117/263 (44%), Gaps = 37/263 (14%)

Query: 22  TALVTGGTKGLGLAVVEELSM----LGATVHT----CSRTETELNE-----CIHHLQMKG 68
            A+VT    G+G A    L+     +G T H+       T  E+        I  L +  
Sbjct: 4   VAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSD 63

Query: 69  LKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMST 128
           L       D         LI  +     G++++ VNN G     P L+ + +++  + + 
Sbjct: 64  LPEGAQALD--------KLIQRL-----GRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTV 110

Query: 129 NFESAFHLCQLA-HPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACE 187
           + + AF   Q+A   +++      I+ ++S          + Y+A K A+  L K +A E
Sbjct: 111 DVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHALGGLTKAMALE 170

Query: 188 WAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRT----PMGRLGEPKEVSSLVAFL 243
             +  I  N+VAP  I TP       NG    +VK  +    P+GR G+  E++SLVA+L
Sbjct: 171 LVEHGILVNAVAPGAIATPM------NGMDDSDVKPDSRPGIPLGRPGDTHEIASLVAWL 224

Query: 244 CMPAASYITGQTVCIDGGFTVNG 266
           C   ASY TGQ++ +DGGF +  
Sbjct: 225 CSEGASYTTGQSLIVDGGFMLAN 247

Length = 256

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score =  116 bits (292), Expect = 3e-31
 Identities = 86/260 (33%), Positives = 125/260 (48%), Gaps = 25/260 (9%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATV-------HTCSRTETELNECIHHLQMKGLK 70
           L+G  AL+TGG  G+G AV    +  GA V             ET+  + I     K L 
Sbjct: 24  LKGKKALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETK--KLIEEEGRKCLL 81

Query: 71  VTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEY-NAEDFSLVMSTN 129
           + G   D+      + L+  V   F GKL+I VNN      + ++E    E       TN
Sbjct: 82  IPG---DLGDESFCRDLVKEVVKEF-GKLDILVNNAAYQHPQESIEDITTEQLEKTFRTN 137

Query: 130 FESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTV----YSATKGAMNQLAKNLA 185
             S F+L + A P L+    +SI+  +S    V+A  G+     Y+ATKGA+    + L+
Sbjct: 138 IFSMFYLTKAALPHLKK--GSSIINTTS----VTAYKGSPHLLDYAATKGAIVAFTRGLS 191

Query: 186 CEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCM 245
            + A+  IR N+VAP  I TP   P     + V E  S+ PMGR G+P EV+    FL  
Sbjct: 192 LQLAEKGIRVNAVAPGPIWTPLI-PSSFPEEKVSEFGSQVPMGRAGQPAEVAPAYVFLAS 250

Query: 246 PAASYITGQTVCIDGGFTVN 265
             +SY+TGQ + ++GG  +N
Sbjct: 251 QDSSYVTGQVLHVNGGEIIN 270

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score =  115 bits (289), Expect = 4e-31
 Identities = 75/240 (31%), Positives = 112/240 (46%), Gaps = 4/240 (1%)

Query: 23  ALVTGGTKGLGLAVVEELSMLGATV-HTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
           ALVTGG  G+G A+ + L+  G  V   C   E      +      G        DVSS 
Sbjct: 3   ALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSF 62

Query: 82  PQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAH 141
              +  +  V +   G +++ VNN G +      +   E +S V+ TN  S F++ Q   
Sbjct: 63  ESCKAAVAKVEAEL-GPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVI 121

Query: 142 PLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPW 201
             +R  G   I+ +SS  G       T YSA K  M    K LA E A   +  N+++P 
Sbjct: 122 DGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPG 181

Query: 202 YIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGG 261
           YI T     +      ++ + ++ P+GRLG P+E+++ VAFL    A YITG T+ I+GG
Sbjct: 182 YIATDMVMAM--REDVLNSIVAQIPVGRLGRPEEIAAAVAFLASEEAGYITGATLSINGG 239

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score =  115 bits (289), Expect = 4e-31
 Identities = 77/247 (31%), Positives = 117/247 (47%), Gaps = 5/247 (2%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECI-HHLQMKGLKVTGSV 75
            L G  A+VTGG KG+G A+   L+  GA V     +  E  E + + L  +G  V    
Sbjct: 3   QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQ 62

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
            DVS       L+    + F GK++I VNN G +  +   + N ED+  V+  N  S F+
Sbjct: 63  ADVSKVEDANRLVEEAVNHF-GKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFN 121

Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRT 195
                 P +  +    I+ +SS +G       T YSA K  M    K+LA E AK N+  
Sbjct: 122 TTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAGMLGFTKSLALELAKTNVTV 181

Query: 196 NSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT 255
           N++ P +I T     +    +   ++ ++ P  R G+  E++  V +LC   A YITGQ 
Sbjct: 182 NAICPGFIDTEMVAEVPEEVR--QKIVAKIPKKRFGQADEIAKGVVYLCRDGA-YITGQQ 238

Query: 256 VCIDGGF 262
           + I+GG 
Sbjct: 239 LNINGGL 245

Length = 247

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score =  115 bits (289), Expect = 5e-31
 Identities = 65/245 (26%), Positives = 110/245 (44%), Gaps = 13/245 (5%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           SLQG    +TGG  GLG A    L+  GA V    R    L++ +  +    L++ G   
Sbjct: 4   SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGG--I 61

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           D+      +  ++ V+  F G+L+  VN  G  V     + +A+ +  +   N ++  + 
Sbjct: 62  DLVDPQAARRAVDEVNRQF-GRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNA 120

Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTN 196
            + A P L ASG   IV + +   + +      Y+A K  + +L + LA E     I  N
Sbjct: 121 SKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVARLTEALAAELLDRGITVN 180

Query: 197 SVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTV 256
           +V P  I TP     + +  F           R   P+++++++AFL    A  ITG ++
Sbjct: 181 AVLPSIIDTPPNRADMPDADF----------SRWVTPEQIAAVIAFLLSDEAQAITGASI 230

Query: 257 CIDGG 261
            +DGG
Sbjct: 231 PVDGG 235

Length = 239

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score =  114 bits (287), Expect = 1e-30
 Identities = 77/251 (30%), Positives = 125/251 (49%), Gaps = 6/251 (2%)

Query: 14  NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTE-TELNECIHHLQMKGLKVT 72
           + +SL+G  A+VTG   GLG  +   L+  G  +   +  E TE  E +  L  + L +T
Sbjct: 4   DAFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLT 63

Query: 73  GSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFES 132
             +  +   P    L+    + F G ++I VNN G    +  +E++ +D+  VM+ N +S
Sbjct: 64  ADLRKIDGIP---ALLERAVAEF-GHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKS 119

Query: 133 AFHLCQLAHPLLRASG-AASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKD 191
            F + Q A     A G    I+ ++S L          Y+A+K  +  + + +A EWAK 
Sbjct: 120 VFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWAKH 179

Query: 192 NIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI 251
           NI  N++AP Y+ T  T+ L  + +   E+  R P GR G P ++   V FL   A+ YI
Sbjct: 180 NINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPVVFLASSASDYI 239

Query: 252 TGQTVCIDGGF 262
            G T+ +DGG+
Sbjct: 240 NGYTIAVDGGW 250

Length = 253

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score =  119 bits (302), Expect = 1e-30
 Identities = 69/259 (26%), Positives = 103/259 (39%), Gaps = 17/259 (6%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
            L G  ALVTG   G+G A  + L+  GA V      E         L     +  G  C
Sbjct: 419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPD-RALGVAC 477

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           DV+     Q      +  F G ++I V+N G ++  P  E + ED+      N    F +
Sbjct: 478 DVTDEAAVQAAFEEAALAFGG-VDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLV 536

Query: 137 CQLAHPLLRASGA-ASIVLMSSALGIV-SANVGTVYSATKGAMNQLAKNLACEWAKDNIR 194
            + A  +++A G   SIV ++S   +    N G  Y A K A   L + LA E   D IR
Sbjct: 537 AREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGA-YGAAKAAELHLVRQLALELGPDGIR 595

Query: 195 TNSVAPWYI--RTPFTEPLLGNG----------KFVDEVKSRTPMGRLGEPKEVSSLVAF 242
            N V P  +   +                    +  +  ++R  + R   P++V+  V F
Sbjct: 596 VNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVTPEDVAEAVVF 655

Query: 243 LCMPAASYITGQTVCIDGG 261
           L     S  TG  + +DGG
Sbjct: 656 LASGLLSKTTGAIITVDGG 674

Length = 681

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score =  114 bits (288), Expect = 1e-30
 Identities = 65/264 (24%), Positives = 107/264 (40%), Gaps = 21/264 (7%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGA-------------TVHTCSRTETELNECIHHL 64
           L+G  A +TG  +G G A    L+  GA                    T  +L+E    +
Sbjct: 1   LEGKVAFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLV 60

Query: 65  QMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSL 124
           +  G KV     DV    + + ++      F G+L++ V N G      + E + E +  
Sbjct: 61  EALGRKVLARKADVRDLAEVRAVVEDGVEQF-GRLDVVVANAGVLSYGRSWELSEEQWDT 119

Query: 125 VMSTNFESAFHLCQLAHP-LLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKN 183
           V+  N    +  C+   P ++      SI++ SS  G+ +      Y+A K  +  L K 
Sbjct: 120 VLDINLTGVWRTCKAVVPHMIERGNGGSIIITSSVAGLKALPGLAHYAAAKHGLVGLTKT 179

Query: 184 LACEWAKDNIRTNSVAPWYIRTPFTEP------LLGNGKFVDEVKSRTPMGRLGEPKEVS 237
           LA E A+  IR NS+ P+ + TP   P       L   +         P+     P++V+
Sbjct: 180 LANELAEYGIRVNSIHPYSVDTPMIAPEAMREAFLKYPEAARAFMPALPVSGFVPPEDVA 239

Query: 238 SLVAFLCMPAASYITGQTVCIDGG 261
             V +L    + YITG  + +D G
Sbjct: 240 DAVLWLASDESRYITGHQLPVDAG 263

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score =  114 bits (288), Expect = 1e-30
 Identities = 77/266 (28%), Positives = 111/266 (41%), Gaps = 21/266 (7%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L G  AL+TGG  G+G A+VE     GA V    R+  +L          G  V     D
Sbjct: 4   LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF---GDHVLVVEGD 60

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVG-----TSVLKPTLEYNAEDFSLVMSTNFES 132
           V+S    Q  ++     F GKL+ FV N G     TS++    E     F  + + N + 
Sbjct: 61  VTSYADNQRAVDQTVDAF-GKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKG 119

Query: 133 AFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDN 192
                + A P L+ASG  S++   S         G +Y+A+K A+  L + LA E A   
Sbjct: 120 YLLGAKAALPALKASG-GSMIFTLSNSSFYPGGGGPLYTASKHAVVGLVRQLAYELAPK- 177

Query: 193 IRTNSVAPWYIRTPFTEPL-LGNGK--------FVDEVKSRTPMGRLGEPKEVSSLVAFL 243
           IR N VAP    T    P  LG G+          D + + TP+    +P++ +     L
Sbjct: 178 IRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPEDHTGPYVLL 237

Query: 244 CMPAAS-YITGQTVCIDGGFTVNGFF 268
                S  +TG  +  DGG  + G  
Sbjct: 238 ASRRNSRALTGVVINADGGLGIRGIR 263

Length = 263

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  113 bits (286), Expect = 2e-30
 Identities = 51/200 (25%), Positives = 87/200 (43%), Gaps = 6/200 (3%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQ-MKGLKVTGSVCDVSS 80
             L+TG + G+GLA+   L+  G  V   +R   +L      L  +    +     DV+ 
Sbjct: 2   VVLITGCSSGIGLALALALAAQGYRVIATARNPDKL----ESLGELLNDNLEVLELDVTD 57

Query: 81  RPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLA 140
               +  +  V   F G++++ VNN G  +  P  E + E+   +   N      + +  
Sbjct: 58  EESIKAAVKEVIERF-GRIDVLVNNAGYGLFGPLEETSIEEVRELFEVNVFGPLRVTRAF 116

Query: 141 HPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAP 200
            PL+R  G+  IV +SS  G+V       Y A+K A+  L+++L  E A   I+   + P
Sbjct: 117 LPLMRKQGSGRIVNVSSVAGLVPTPFLGPYCASKAALEALSESLRLELAPFGIKVTIIEP 176

Query: 201 WYIRTPFTEPLLGNGKFVDE 220
             +RT F +   G+     E
Sbjct: 177 GPVRTGFADNAAGSALEDPE 196

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score =  114 bits (286), Expect = 2e-30
 Identities = 68/257 (26%), Positives = 106/257 (41%), Gaps = 22/257 (8%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATV-------HTCSRTETELNECIHHLQMKGLK 70
                A+VTG   G+G A  E L+  GA+V           R   ++          G  
Sbjct: 4   FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVA-------DGGT 56

Query: 71  VTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNV---GTSVLKPTLEYNAEDFSLVMS 127
                 DVS     + + +   S F G ++  VNN    G   L   +    + +   MS
Sbjct: 57  AIAVQVDVSDPDSAKAMADATVSAF-GGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMS 115

Query: 128 TNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACE 187
            N + A    +  +  +   G  +IV  SS    + +N    Y   K  +N L + LA E
Sbjct: 116 VNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLYSNF---YGLAKVGLNGLTQQLARE 172

Query: 188 WAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA 247
               NIR N++AP  I T  T  +    +FV ++    P+ R+G P+++  +  FL    
Sbjct: 173 LGGMNIRVNAIAPGPIDTEATRTVT-PKEFVADMVKGIPLSRMGTPEDLVGMCLFLLSDE 231

Query: 248 ASYITGQTVCIDGGFTV 264
           AS+ITGQ   +DGG  +
Sbjct: 232 ASWITGQIFNVDGGQII 248

Length = 250

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score =  113 bits (286), Expect = 2e-30
 Identities = 72/256 (28%), Positives = 109/256 (42%), Gaps = 13/256 (5%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQ--MKGLKVTGSV 75
           L G  ALVTG  +G+G A+    +  GA V                +   + G +V    
Sbjct: 5   LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVP 64

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
            DV+        +      F G L++ VNN G +V    L    ED+    + + + A++
Sbjct: 65  ADVTDAASVAAAVAAAEEAF-GPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWN 123

Query: 136 LCQLAHPLLRASGAASIVLMSS--ALGIVSANVGTV-YSATKGAMNQLAKNLACEWAKDN 192
            C+   P +   G  SIV ++S  A  I+    G   Y   K  +  L + L  E+A  N
Sbjct: 124 GCRAVLPGMVERGRGSIVNIASTHAFKIIP---GCFPYPVAKHGLLGLTRALGIEYAARN 180

Query: 193 IRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRT----PMGRLGEPKEVSSLVAFLCMPAA 248
           +R N++AP YI T  TE            ++ T    PM R+G P+EV+    FL    A
Sbjct: 181 VRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAMTAVFLASDEA 240

Query: 249 SYITGQTVCIDGGFTV 264
            +I    + IDGG +V
Sbjct: 241 PFINATCITIDGGRSV 256

Length = 260

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score =  111 bits (280), Expect = 2e-30
 Identities = 51/171 (29%), Positives = 79/171 (46%), Gaps = 8/171 (4%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGAT-VHTCSRTETE--LNECIHHLQMKGLKVTGSVCDV 78
           T L+TGGT GLGLA+   L+  GA  +   SR        E +  L+  G +VT + CDV
Sbjct: 2   TVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAEVTVAACDV 61

Query: 79  SSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQ 138
           + R     L+  + +   G L+  V+N G     P  E   E F  V++     A++L +
Sbjct: 62  ADRDALAALLAALPAAL-GPLDGVVHNAGVLDDGPLEELTPERFERVLAPKVTGAWNLHE 120

Query: 139 LAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWA 189
           L   L       + VL SS  G++ +     Y+A   A++ LA++   E  
Sbjct: 121 LTRDL----DLGAFVLFSSVAGVLGSPGQANYAAANAALDALAEHRRAEGL 167

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score =  112 bits (283), Expect = 5e-30
 Identities = 67/254 (26%), Positives = 123/254 (48%), Gaps = 7/254 (2%)

Query: 14  NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTG 73
           + +SL G   L+TG  +G+G  +   L+  GA +     T       +  L+ +G+K   
Sbjct: 3   DLFSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHA 62

Query: 74  SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESA 133
           +  +V+ + + +  I  +     G +++ +NN G     P  E+  ++++ V++ N  + 
Sbjct: 63  APFNVTHKQEVEAAIEHIEKDI-GPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAV 121

Query: 134 FHLCQLAHPLLRASGAASIV---LMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAK 190
           F + Q     +    A  I+    M S LG    +  T Y+A+KGA+  L + +  E A+
Sbjct: 122 FLVSQAVARYMVKRQAGKIINICSMQSELG---RDTITPYAASKGAVKMLTRGMCVELAR 178

Query: 191 DNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY 250
            NI+ N +AP Y +T  T+ L+ +  F   +  RTP  R G+P+E+     FL   A+ +
Sbjct: 179 HNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSSKASDF 238

Query: 251 ITGQTVCIDGGFTV 264
           + G  + +DGG  V
Sbjct: 239 VNGHLLFVDGGMLV 252

Length = 254

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score =  111 bits (279), Expect = 1e-29
 Identities = 70/249 (28%), Positives = 121/249 (48%), Gaps = 11/249 (4%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVH-TCSRTETELNECIHHLQMKGLKVTGSVC 76
           L    A+VTG ++G+G A+   L+  G  V    + +    +E +  ++  G +      
Sbjct: 3   LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQA 62

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           DV+       L +   + F G++++ VNN G   L    +++ EDF   ++TN   AF +
Sbjct: 63  DVADAAAVTRLFDAAETAF-GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVV 121

Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTN 196
            + A   L   G   I+ +S+++  +       Y+A+K A+  L   LA E     I  N
Sbjct: 122 LREAARHLGQGG--RIINLSTSVIALPLPGYGPYAASKAAVEGLVHVLANELRGRGITVN 179

Query: 197 SVAPWYIRTPFTEPLLGNGK---FVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG 253
           +VAP     P    L  NGK    +D++    P+ RLG P+E+++ VAFL  P  +++ G
Sbjct: 180 AVAP----GPVATELFFNGKSAEQIDQLAGLAPLERLGTPEEIAAAVAFLAGPDGAWVNG 235

Query: 254 QTVCIDGGF 262
           Q + ++GGF
Sbjct: 236 QVLRVNGGF 244

Length = 245

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  110 bits (277), Expect = 4e-29
 Identities = 76/263 (28%), Positives = 115/263 (43%), Gaps = 31/263 (11%)

Query: 21  MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETE-LNECIHHLQMKGLKVTGSVCDVS 79
             ALVTGG +G+GL +   L+  G  +    R + E L      L+  G++V     DV+
Sbjct: 3   PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVA 62

Query: 80  SRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLK--PTLEYNAEDFSLVMSTNFESAFHLC 137
                + +++   + + G+++  VNN G  V      L+   E F  V++ N    F L 
Sbjct: 63  DLSAHEAMLDAAQAAW-GRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLT 121

Query: 138 Q------LAHPLLRASGAASIVLMSSALGI-VSANVGTVYSATKGAMNQLAKNLACEWAK 190
           Q      LA P        SIV +SS   I VS N G  Y  +K  ++  A+  A   A+
Sbjct: 122 QAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGE-YCISKAGLSMAAQLFAARLAE 180

Query: 191 DNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSR---------TPMGRLGEPKEVSSLVA 241
           + I    V P  I+T  T P          V ++          PM R GEP++V+  VA
Sbjct: 181 EGIGVYEVRPGLIKTDMTAP----------VTAKYDALIAKGLVPMPRWGEPEDVARAVA 230

Query: 242 FLCMPAASYITGQTVCIDGGFTV 264
            L      Y TGQ + +DGG ++
Sbjct: 231 ALASGDLPYSTGQAIHVDGGLSI 253

Length = 256

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  110 bits (276), Expect = 4e-29
 Identities = 82/261 (31%), Positives = 134/261 (51%), Gaps = 23/261 (8%)

Query: 16  WSLQGMTALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTETELNECIHHLQMKGLKVTG 73
           +SL+    +VTG  +G+G A+   L+  G+   V+   R E E+NE +  ++  G +  G
Sbjct: 2   YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAE-EMNETLKMVKENGGEGIG 60

Query: 74  SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLV---MSTNF 130
            + DVS+R   +TL       + G  +I VNN G  +  P L  N +D  L+   +ST+F
Sbjct: 61  VLADVSTREGCETLAKATIDRY-GVADILVNNAGLGLFSPFL--NVDD-KLIDKHISTDF 116

Query: 131 ESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAK 190
           +S  +  Q     +R  G  +IV ++S  GI  A   ++Y A K A+  L K LA E A 
Sbjct: 117 KSVIYCSQELAKEMREGG--AIVNIASVAGIRPAYGLSIYGAMKAAVINLTKYLALELAP 174

Query: 191 DNIRTNSVAPWYIRTPFTEPL-----LGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCM 245
             IR N++AP +++T   E L     +   +F ++    T MG++ +P+EV+  VA +  
Sbjct: 175 -KIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKF---TLMGKILDPEEVAEFVAAILK 230

Query: 246 PAASYITGQTVCIDGGFTVNG 266
             +  ITGQ   +D G ++ G
Sbjct: 231 IES--ITGQVFVLDSGESLKG 249

Length = 252

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score =  110 bits (277), Expect = 5e-29
 Identities = 69/252 (27%), Positives = 118/252 (46%), Gaps = 7/252 (2%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
             G   +V GGT G+ L + +  +  GA V   SR++ +++  +  LQ  G +  G   D
Sbjct: 7   FAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSAD 66

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           V      +     ++  F G +++ V+    +   P    +A  F  V+  +    F++ 
Sbjct: 67  VRDYAAVEAAFAQIADEF-GPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVL 125

Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNS 197
           + A+PLLR  GA SI+ +S+    V   +     A K  ++ L + LA EW  + IR NS
Sbjct: 126 KAAYPLLRRPGA-SIIQISAPQAFVPMPMQAHVCAAKAGVDMLTRTLALEWGPEGIRVNS 184

Query: 198 VAPWYIRTPFTE---PLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ 254
           + P  I    TE    L  + +    V    P+ R G  +++++   FL    ASYITG 
Sbjct: 185 IVPGPIAG--TEGMARLAPSPELQAAVAQSVPLKRNGTKQDIANAALFLASDMASYITGV 242

Query: 255 TVCIDGGFTVNG 266
            + +DGG+++ G
Sbjct: 243 VLPVDGGWSLGG 254

Length = 264

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score =  109 bits (275), Expect = 7e-29
 Identities = 63/262 (24%), Positives = 111/262 (42%), Gaps = 25/262 (9%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETE-----LNECIHHLQMKGLKVTGSVC 76
            A+VTG ++G+G A+  EL+  G  +      + +     + E +      G +      
Sbjct: 3   VAIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAA----GRRAIYFQA 58

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPT--LEYNAEDFSLVMSTNFESAF 134
           D+      + L++     F G+L+  VNN G +V      L+   + F  +++ N    F
Sbjct: 59  DIGELSDHEALLDQAWEDF-GRLDCLVNNAGIAVRPRGDLLDLTEDSFDRLIAINLRGPF 117

Query: 135 HLCQ------LAHPLLRASGAASIVLMSS-ALGIVSANVGTVYSATKGAMNQLAKNLACE 187
            L Q      +  P        SI+ ++S    +VS N G  Y  +K  ++   + LA  
Sbjct: 118 FLTQAVARRMVEQPDRFDGPHRSIIFVTSINAYLVSPNRGE-YCISKAGLSMATRLLAYR 176

Query: 188 WAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEV--KSRTPMGRLGEPKEVSSLVAFLCM 245
            A + I  + + P  I T  T P+    +  DE+      P+ R G+P++++  V  L  
Sbjct: 177 LADEGIAVHEIRPGLIHTDMTAPV---KEKYDELIAAGLVPIRRWGQPEDIAKAVRTLAS 233

Query: 246 PAASYITGQTVCIDGGFTVNGF 267
               Y TGQ + IDGG ++   
Sbjct: 234 GLLPYSTGQPINIDGGLSMRRL 255

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|187619 cd05361, haloalcohol_DH_SDR_c-like, haloalcohol dehalogenase, classical (c) SDRs

 Score =  109 bits (274), Expect = 7e-29
 Identities = 66/245 (26%), Positives = 105/245 (42%), Gaps = 11/245 (4%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
            ALVT      G A  E L+  G TV     +  +  E     Q    +  G+      +
Sbjct: 3   IALVTHARHFAGPASAEALTEDGYTVVCHDASFADAAE----RQAFESENPGTKALSEQK 58

Query: 82  PQRQTLINTVSSLFNGKLNIFVNN-VGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLA 140
           P+   L++ V     G +++ V+N      + P    +  D            F L Q A
Sbjct: 59  PEE--LVDAVLQAG-GAIDVLVSNDYIPRPMNPIDGTSEADIRQAFEALSIFPFALLQAA 115

Query: 141 HPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAP 200
              ++ +G  SI+ ++SA+        ++Y   + A   LA++LA E ++DNI   ++ P
Sbjct: 116 IAQMKKAGGGSIIFITSAVPKKPLAYNSLYGPARAAAVALAESLAKELSRDNILVYAIGP 175

Query: 201 WYIRTPF---TEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVC 257
            +  +P    T     N +  + VK   P+GRLG P E+ +LVAFL    A  ITGQ   
Sbjct: 176 NFFNSPTYFPTSDWENNPELRERVKRDVPLGRLGRPDEMGALVAFLASRRADPITGQFFA 235

Query: 258 IDGGF 262
             GG+
Sbjct: 236 FAGGY 240

Dehalogenases cleave carbon-halogen bonds. Haloalcohol dehalogenase show low sequence similarity to short-chain dehydrogenases/reductases (SDRs). Like the SDRs, haloalcohol dehalogenases have a conserved catalytic triad (Ser-Tyr-Lys/Arg), and form a Rossmann fold. However, the normal classical SDR NAD(P)-binding motif (TGXXGXG) and NAD-binding function is replaced with a halide binding site, allowing the enzyme to catalyze a dehalogenation reaction. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score =  109 bits (273), Expect = 9e-29
 Identities = 66/252 (26%), Positives = 108/252 (42%), Gaps = 22/252 (8%)

Query: 23  ALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVT--GSVCDVSS 80
            +VTG  +G+G AV   L   GATV         L E    L++  L V    +V +V S
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAGATVIALDLPFVLLLEYGDPLRLTPLDVADAAAVREVCS 60

Query: 81  RPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLA 140
           R   +           G ++  VN  G      T   + ED+    + N    F+L Q  
Sbjct: 61  RLLAEH----------GPIDALVNCAGVLRPGATDPLSTEDWEQTFAVNVTGVFNLLQAV 110

Query: 141 HPLLRASGAASIVLMSS-ALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVA 199
            P ++     +IV ++S A  +   ++   Y A+K A+  L+K L  E A   +R N V+
Sbjct: 111 APHMKDRRTGAIVTVASNAAHVPRISMAA-YGASKAALASLSKCLGLELAPYGVRCNVVS 169

Query: 200 PWYIRTPFTEPLLG--NGK------FVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI 251
           P    T     L    +G         ++ +   P+G++ +P ++++ V FL    A +I
Sbjct: 170 PGSTDTAMQRTLWHDEDGAAQVIAGVPEQFRLGIPLGKIAQPADIANAVLFLASDQAGHI 229

Query: 252 TGQTVCIDGGFT 263
           T   + +DGG T
Sbjct: 230 TMHDLVVDGGAT 241

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score =  108 bits (272), Expect = 1e-28
 Identities = 59/193 (30%), Positives = 90/193 (46%), Gaps = 15/193 (7%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSS 80
            ALVTG  +G+G  +V +L+  G  TV   +R        +  L+ +GL V     DV+ 
Sbjct: 2   VALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAEGLSVRFHQLDVTD 61

Query: 81  RPQRQTLINTVSSLFNGKLNIFVNNVGTSVL-----KPTLEYNAEDFSLVMSTNFESAFH 135
               +   + V   + G L+I VNN G +        PT E  A +    M TNF     
Sbjct: 62  DASIEAAADFVEEKY-GGLDILVNNAGIAFKGFDDSTPTRE-QARE---TMKTNFFGTVD 116

Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRT 195
           + Q   PLL+ S A  IV +SS LG ++    + Y  +K A+N L + LA E  +  I+ 
Sbjct: 117 VTQALLPLLKKSPAGRIVNVSSGLGSLT----SAYGVSKAALNALTRILAKELKETGIKV 172

Query: 196 NSVAPWYIRTPFT 208
           N+  P +++T   
Sbjct: 173 NACCPGWVKTDMG 185

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score =  108 bits (273), Expect = 2e-28
 Identities = 68/255 (26%), Positives = 112/255 (43%), Gaps = 17/255 (6%)

Query: 23  ALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRP 82
            LVTG  +G+G AV   L+  GA V    R   +L E +  L+  G        DV+   
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRYGYPFATYKLDVADSA 60

Query: 83  QRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHP 142
               ++  +     G +++ VN  G   L      + ED+    + N    F++ Q   P
Sbjct: 61  AVDEVVQRLERE-YGPIDVLVNVAGILRLGAIDSLSDEDWQATFAVNTFGVFNVSQAVSP 119

Query: 143 LLRASGAASIVLMSSALGIVSANVGTV----YSATKGAMNQLAKNLACEWAKDNIRTNSV 198
            ++   + +IV + S     +ANV  +    Y+A+K A+  L K L  E A   IR N V
Sbjct: 120 RMKRRRSGAIVTVGSN----AANVPRMGMAAYAASKAALTMLTKCLGLELAPYGIRCNVV 175

Query: 199 APWYIRTPFTEPLLG--NGK------FVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY 250
           +P    T     L     G+        ++ +   P+G++ EP ++++ V FL    AS+
Sbjct: 176 SPGSTDTEMQRQLWNDEYGEQQVIAGSPEQFRLGIPLGKIAEPSDIANAVLFLASDLASH 235

Query: 251 ITGQTVCIDGGFTVN 265
           IT   + +DGG T+ 
Sbjct: 236 ITMHDLVVDGGATLG 250

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score =  107 bits (270), Expect = 4e-28
 Identities = 68/251 (27%), Positives = 120/251 (47%), Gaps = 3/251 (1%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
            L G  A++TG + G+G A  +  +  GA V   +R + EL++ +  ++ +G +      
Sbjct: 3   RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAG 62

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGT-SVLKPTLEYNAEDFSLVMSTNFESAFH 135
           DV      + L+      F G L+I  NN GT   + P  E + E +   ++TN  SAF 
Sbjct: 63  DVRDEAYAKALVALAVERF-GGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFL 121

Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVGT-VYSATKGAMNQLAKNLACEWAKDNIR 194
             +   P + A G  S++  S+ +G  +   G   Y+A+K  +  L + LA E+    IR
Sbjct: 122 GAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAASKAGLIGLTQVLAAEYGAQGIR 181

Query: 195 TNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ 254
            N++ P    TP    +    + +  V     + R+ +P+E++    FL   AAS++TG 
Sbjct: 182 VNALLPGGTDTPMGRAMGDTPEALAFVAGLHALKRMAQPEEIAQAALFLASDAASFVTGT 241

Query: 255 TVCIDGGFTVN 265
            + +DGG ++ 
Sbjct: 242 ALLVDGGVSIT 252

Length = 254

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score =  107 bits (268), Expect = 8e-28
 Identities = 77/255 (30%), Positives = 122/255 (47%), Gaps = 20/255 (7%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L G  A++TGG  G+GLA    L+  GATV      + E  +     ++ GL V     D
Sbjct: 5   LAGRVAVITGGGSGIGLATARRLAAEGATV-VVGDIDPEAGKAAAD-EVGGLFVP---TD 59

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKP-----TLEYNAEDFSLVMSTNFES 132
           V+       L +T +  + G ++I  NN G S   P      L    + +  V   N  S
Sbjct: 60  VTDEDAVNALFDTAAETY-GSVDIAFNNAGIS---PPEDDSILNTGLDAWQRVQDVNLTS 115

Query: 133 AFHLCQLAHPLLRASGAASIVLMSSALGIV-SANVGTVYSATKGAMNQLAKNLACEWAKD 191
            +  C+ A P +   G  SI+  +S + ++ SA     Y+A+KG +  +++ L  ++A+ 
Sbjct: 116 VYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTASKGGVLAMSRELGVQFARQ 175

Query: 192 NIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSR---TPMGRLGEPKEVSSLVAFLCMPAA 248
            IR N++ P  + TP  + L    K  +    R    PMGR  EP+E+++ VAFL    A
Sbjct: 176 GIRVNALCPGPVNTPLLQELFA--KDPERAARRLVHVPMGRFAEPEEIAAAVAFLASDDA 233

Query: 249 SYITGQTVCIDGGFT 263
           S+IT  T  +DGG +
Sbjct: 234 SFITASTFLVDGGIS 248

Length = 255

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score =  107 bits (268), Expect = 8e-28
 Identities = 79/259 (30%), Positives = 118/259 (45%), Gaps = 17/259 (6%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHL--QMKGLKVTGSV 75
           L+G  A+VTGG+ G+GLA VE L   GA+V  C R E  L      L  +  G ++  + 
Sbjct: 6   LEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAAR 65

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
           CDV            V + F G +++ VNN G   +    +   + +   +   + S  +
Sbjct: 66  CDVLDEADVAAFAAAVEARF-GGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVIN 124

Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRT 195
             +   PLLRAS AASIV ++S L +         SA +  +  L K+LA E A   +R 
Sbjct: 125 PTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATSAARAGLLNLVKSLATELAPKGVRV 184

Query: 196 NSV-------APWYIRTPF---TEPLLGNGKFVDEV--KSRTPMGRLGEPKEVSSLVAFL 243
           NS+         W  R  +    +P      +   +  K   P+GRLG P E +  + FL
Sbjct: 185 NSILLGLVESGQW--RRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPDEAARALFFL 242

Query: 244 CMPAASYITGQTVCIDGGF 262
             P +SY TG  + + GGF
Sbjct: 243 ASPLSSYTTGSHIDVSGGF 261

Length = 265

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score =  106 bits (267), Expect = 9e-28
 Identities = 63/251 (25%), Positives = 100/251 (39%), Gaps = 28/251 (11%)

Query: 27  GGTKGLGLAVVEELSMLGAT-VHTCSRTETELNECIHHLQMKGLKVTGS---VCDVSSRP 82
                +  A+ +  +  GA  V T       +         +  K   +     DV+S  
Sbjct: 3   ADDNSIAWAIAKAAAEEGAEVVLTTWPPALRMGA-----VDELAKELPADVIPLDVTSDE 57

Query: 83  QRQTLINTVSSLFNGKLNIFVNNVGTS----VLKPTLEYNAEDFSLVMSTNFESAFH-LC 137
               L   V     GK++  V+++  S      KP L+ + E F   +  +  S F  L 
Sbjct: 58  DIDELFEKVKEDG-GKIDFLVHSIAMSPEIRKGKPYLDTSREGFLKALDISAYS-FISLA 115

Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVGTV-----YSATKGAMNQLAKNLACEWAKDN 192
           + A PL+   G  SIV +S       A              K A+  LA+ LA E  +  
Sbjct: 116 KAAKPLMNEGG--SIVALSY-----IAAERVFPGYGGMGVAKAALESLARYLAYELGRKG 168

Query: 193 IRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT 252
           IR N+++    +T     + G  K V+  +   P+GR    +EV++  AFL    A  IT
Sbjct: 169 IRVNTISAGPTKTTAGSGIGGFDKMVEYAEEMAPLGRNASAEEVANAAAFLLSDLARGIT 228

Query: 253 GQTVCIDGGFT 263
           GQ + +DGGF+
Sbjct: 229 GQILYVDGGFS 239

Length = 239

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score =  106 bits (268), Expect = 1e-27
 Identities = 73/272 (26%), Positives = 121/272 (44%), Gaps = 32/272 (11%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           SL+G  A++TGG   LG A+ +EL+  GA V    R + +    +  ++  G +      
Sbjct: 7   SLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKA 66

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVN------------NVGTSVLKPT---LEYNAED 121
           DV  +   +     +   F G  +I +N            N    +++PT    + + E 
Sbjct: 67  DVLDKESLEQARQQILEDF-GPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEG 125

Query: 122 FSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSS-----ALGIVSANVGTVYSATKGA 176
           F  V   N        Q+    +      +I+ +SS      L  V A     YSA K A
Sbjct: 126 FEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPLTKVPA-----YSAAKAA 180

Query: 177 MNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN--GKFVD---EVKSRTPMGRLG 231
           ++   + LA  +AK  IR N++AP +  T     LL N  G   +   ++ + TPMGR G
Sbjct: 181 ISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTPMGRFG 240

Query: 232 EPKEVSSLVAFLCMP-AASYITGQTVCIDGGF 262
           +P+E+   + +L    A+S++TG  + +DGGF
Sbjct: 241 KPEELLGTLLWLADEKASSFVTGVVLPVDGGF 272

Length = 278

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score =  106 bits (265), Expect = 1e-27
 Identities = 67/251 (26%), Positives = 108/251 (43%), Gaps = 5/251 (1%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L+  TA+VTGG  G+G A     +  GA V           +    ++ KG       CD
Sbjct: 1   LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACD 60

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           ++ R    T +        G +++ VNN G     P  +     +  +++ N   A H+ 
Sbjct: 61  ITDRDSVDTAVAAAEQAL-GPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMH 119

Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNS 197
               P +   GA  IV ++S    V ++   VY+A KG +   +K +A E A+  I  N 
Sbjct: 120 HAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGLVAFSKTMAREHARHGITVNV 179

Query: 198 VAPWYIRTPFTEPLLGNG----KFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG 253
           V P    T   + + G      K  +      P+GRLG+P ++   + F     AS+ITG
Sbjct: 180 VCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFSSDDASFITG 239

Query: 254 QTVCIDGGFTV 264
           Q + + GG T+
Sbjct: 240 QVLSVSGGLTM 250

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  105 bits (265), Expect = 2e-27
 Identities = 75/259 (28%), Positives = 124/259 (47%), Gaps = 26/259 (10%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L+    ++TGG +GLG A+ E L+  GA +      + +L E +      G +V G   +
Sbjct: 3   LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAAN 62

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAED-----------FSLVM 126
           V+     +     ++  F G+LN  +NN G  +L+  L   A+D           F  V+
Sbjct: 63  VTDEEDVEATFAQIAEDF-GQLNGLINNAG--ILRDGLLVKAKDGKVTSKMSLEQFQSVI 119

Query: 127 STNFESAFHLC--QLAHPLLRASGAASIVLMSSALGIVSA-NVG-TVYSATKGAMNQLAK 182
             N    F LC  + A  ++ +     I+ +SS   I  A N+G T YSA+K  +  +  
Sbjct: 120 DVNLTGVF-LCGREAAAKMIESGSKGVIINISS---IARAGNMGQTNYSASKAGVAAMTV 175

Query: 183 NLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAF 242
             A E A+  IR  ++AP  I T  T  +    + ++ ++   P+GRLGEP+E++  V F
Sbjct: 176 TWAKELARYGIRVAAIAPGVIETEMTAAM--KPEALERLEKMIPVGRLGEPEEIAHTVRF 233

Query: 243 LCMPAASYITGQTVCIDGG 261
           +      Y+TG+ + IDGG
Sbjct: 234 II--ENDYVTGRVLEIDGG 250

Length = 253

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score =  104 bits (261), Expect = 5e-27
 Identities = 64/248 (25%), Positives = 102/248 (41%), Gaps = 23/248 (9%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATV--HTCSRTETELNECIHHLQMKGLKVTGSVCDVS 79
            ALVTG  K +G A+ E L+  G  V  H  +R+E E       L            D+S
Sbjct: 2   VALVTGAAKRIGRAIAEALAAEGYRVVVH-YNRSEAEAQRLKDELNALRNSAVLVQADLS 60

Query: 80  SRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQL 139
                  L+      F G+ ++ VNN       P  + + + ++ +   N ++ + L Q 
Sbjct: 61  DFAACADLVAAAFRAF-GRCDVLVNNASAFYPTPLGQGSEDAWAELFGINLKAPYLLIQA 119

Query: 140 AHPLLRASGAASIVLMSSALGIVSANVG------TVYSATKGAMNQLAKNLACEWAKDNI 193
               L  S   SI+       I+ A           Y  +K A+  L ++ A E A  NI
Sbjct: 120 FARRLAGSRNGSII------NIIDAMTDRPLTGYFAYCMSKAALEGLTRSAALELAP-NI 172

Query: 194 RTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG 253
           R N +AP  I      P   + ++ +    + P+ R    +E++  V FL     +YITG
Sbjct: 173 RVNGIAPGLI----LLPEDMDAEYRENALRKVPLKRRPSAEEIADAVIFLLDS--NYITG 226

Query: 254 QTVCIDGG 261
           Q + +DGG
Sbjct: 227 QIIKVDGG 234

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score =  103 bits (259), Expect = 9e-27
 Identities = 76/245 (31%), Positives = 118/245 (48%), Gaps = 8/245 (3%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L G  ALVTG + G+G  +   L   GA V        +L      L   G +V     +
Sbjct: 4   LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL---GERVKIFPAN 60

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           +S R + + L     +   G ++I VNN G +     +  + ED+  V+  N  + F L 
Sbjct: 61  LSDRDEVKALGQKAEADLEG-VDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLT 119

Query: 138 -QLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTN 196
            +L HP++R      I+ ++S +G+        Y A+K  M   +K+LA E A  N+  N
Sbjct: 120 RELTHPMMRRR-YGRIINITSVVGVTGNPGQANYCASKAGMIGFSKSLAQEIATRNVTVN 178

Query: 197 SVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTV 256
            VAP +I +  T  L  N K  + +    PM R+G   EV+S VA+L    A+Y+TGQT+
Sbjct: 179 CVAPGFIESAMTGKL--NDKQKEAIMGAIPMKRMGTGAEVASAVAYLASSEAAYVTGQTI 236

Query: 257 CIDGG 261
            ++GG
Sbjct: 237 HVNGG 241

Length = 245

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score =  103 bits (259), Expect = 1e-26
 Identities = 54/194 (27%), Positives = 90/194 (46%), Gaps = 5/194 (2%)

Query: 20  GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK----GLKVTGSV 75
           G   L+TGG+ G+G A+ +EL   GA V   +R+E++L E +  ++ +    G KV+   
Sbjct: 1   GKHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYIS 60

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
            D+S   + +           G  ++ VN  G S+     +  AE+F   M  N+  + +
Sbjct: 61  ADLSDYEEVEQAFAQAVEKG-GPPDLVVNCAGISIPGLFEDLTAEEFERGMDVNYFGSLN 119

Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRT 195
           +     PL++      IV +SS   +V     + Y  +K A+  LA++L  E    NIR 
Sbjct: 120 VAHAVLPLMKEQRPGHIVFVSSQAALVGIYGYSAYCPSKFALRGLAESLRQELKPYNIRV 179

Query: 196 NSVAPWYIRTPFTE 209
           + V P    TP  E
Sbjct: 180 SVVYPPDTDTPGFE 193

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score =  103 bits (259), Expect = 2e-26
 Identities = 73/255 (28%), Positives = 114/255 (44%), Gaps = 20/255 (7%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGAT-VHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           L G  ALVTGGT+GLG A+    +  GA  +  C R   +       L+  G K      
Sbjct: 4   LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQA 63

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           D+S     + ++      F G+L+  VN  G +     L+ + E F    + N  + F L
Sbjct: 64  DLSDVEDCRRVVAAADEAF-GRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFL 122

Query: 137 CQLAHPLLRASGAA-SIVLMSSALGIVSANVG----TVYSATKGAMNQLAKNLACEWAKD 191
            Q A  L+R   A  +IV + S    +SA+ G      Y A+KGA+  L +N A    ++
Sbjct: 123 MQEAIKLMRRRKAEGTIVNIGS----MSAHGGQPFLAAYCASKGALATLTRNAAYALLRN 178

Query: 192 NIRTNSVAPWYIRTPFTEPLLGNGKF-------VDEVKSRTPMGRLGEPKEVSSLVAFLC 244
            IR N +   ++ T   E  +   +F       +++  +  P GRL +P EV+  VAFL 
Sbjct: 179 RIRVNGLNIGWMATE-GEDRI-QREFHGAPDDWLEKAAATQPFGRLLDPDEVARAVAFLL 236

Query: 245 MPAASYITGQTVCID 259
              +  +TG  +  D
Sbjct: 237 SDESGLMTGSVIDFD 251

Length = 260

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score =  102 bits (257), Expect = 3e-26
 Identities = 77/268 (28%), Positives = 116/268 (43%), Gaps = 41/268 (15%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATV--HTCSRTETELNECIHHLQMKGLKVTGS 74
           +     AL+TGG + +G A+   L   G  V  H   R+  E +     L        GS
Sbjct: 3   TDSAKVALITGGARRIGAAIARTLHAAGYRVAIH-YHRSAAEADALAAELN---ALRPGS 58

Query: 75  VC----DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTL--EYNAEDFSLVMST 128
                 D+        L+    + F G+L+  VNN   S   PT         +  + ++
Sbjct: 59  AAALQADLLDPDALPELVAACVAAF-GRLDALVNN--ASSFYPTPLGSITEAQWDDLFAS 115

Query: 129 NFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG------TVYSATKGAMNQLAK 182
           N ++ F L Q A P LR    A IV       I   +         VY A K A+  L +
Sbjct: 116 NLKAPFFLSQAAAPQLRKQRGA-IV------NITDIHAERPLKGYPVYCAAKAALEMLTR 168

Query: 183 NLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVK-----SRTPMGRLGEPKEVS 237
           +LA E A + +R N+VAP  I  P       +G   DE       +RTP+ R+G P++++
Sbjct: 169 SLALELAPE-VRVNAVAPGAILWP------EDGNSFDEEARQAILARTPLKRIGTPEDIA 221

Query: 238 SLVAFLCMPAASYITGQTVCIDGGFTVN 265
             V FL +  AS+ITGQ + +DGG ++ 
Sbjct: 222 EAVRFL-LADASFITGQILAVDGGRSLT 248

Length = 249

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score =  102 bits (257), Expect = 3e-26
 Identities = 49/184 (26%), Positives = 82/184 (44%), Gaps = 3/184 (1%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           +L+G  AL+TG + G+G A    L+  GA V   +R E  L       ++          
Sbjct: 3   TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEAL--ADEIGAGAALALAL 60

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           DV+ R   +  I  +   F G+++I VNN G ++  P  E + +D+  ++ TN +   + 
Sbjct: 61  DVTDRAAVEAAIEALPEEF-GRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNG 119

Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTN 196
            +   P +    +  I+ + S  G      G VY ATK A+   +  L  E A   IR  
Sbjct: 120 TRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAAVRAFSLGLRQELAGTGIRVT 179

Query: 197 SVAP 200
            ++P
Sbjct: 180 VISP 183

Length = 246

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score =  101 bits (254), Expect = 4e-26
 Identities = 66/226 (29%), Positives = 97/226 (42%), Gaps = 18/226 (7%)

Query: 23  ALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRP 82
           ALVTG ++G+G A    L   G  V  C+R E  L         +   V G   DV    
Sbjct: 3   ALVTGASRGIGEATARLLHAEGYRVGICARDEARLAAA---AAQELEGVLGLAGDVRDEA 59

Query: 83  QRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHP 142
             +  ++ +   F G L+  VNN G  V+KP  E   E++ LV+ TN   AF+    A P
Sbjct: 60  DVRRAVDAMEEAFGG-LDALVNNAGVGVMKPVEELTPEEWRLVLDTNLTGAFYCIHKAAP 118

Query: 143 LLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWY 202
            L   G  +IV + S  G  +   G  Y+A+K  +  L++    +  + NIR  +V P  
Sbjct: 119 ALLRRGGGTIVNVGSLAGKNAFKGGAAYNASKFGLLGLSEAAMLDLREANIRVVNVMPGS 178

Query: 203 IRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAF-LCMPA 247
           + T F       G    +            P++V+  V F L MPA
Sbjct: 179 VDTGF------AGSPEGQ-------AWKLAPEDVAQAVLFALEMPA 211

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score =  102 bits (255), Expect = 5e-26
 Identities = 77/253 (30%), Positives = 110/253 (43%), Gaps = 11/253 (4%)

Query: 23  ALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRP 82
           ALVTG  +G+G A+ + L   G  V      E         L   G K      DVS R 
Sbjct: 5   ALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRD 64

Query: 83  QRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHP 142
           Q    +  V   F G LN+ VNN G +   P      E F  V + N        Q A  
Sbjct: 65  QVFAAVRQVVDTF-GDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQE 123

Query: 143 LLRASG-AASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPW 201
             +  G    I+  +S  G+V      VYS+TK A+  L +  A + A + I  N+ AP 
Sbjct: 124 AFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPG 183

Query: 202 YIRTPFTEPLL-----GNGKFVD----EVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT 252
            ++TP    +        GK  +    +      +GRL EP++V++ V+FL  P + YIT
Sbjct: 184 IVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVANCVSFLAGPDSDYIT 243

Query: 253 GQTVCIDGGFTVN 265
           GQT+ +DGG   +
Sbjct: 244 GQTIIVDGGMVFH 256

Length = 256

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score =  100 bits (251), Expect = 1e-25
 Identities = 58/191 (30%), Positives = 92/191 (48%), Gaps = 3/191 (1%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           SL+G  AL+TGG+KG+G A+ E L   G  V   +R + EL E    L  KG  V G   
Sbjct: 3   SLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKG-NVLGLAA 61

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           DV      Q  ++ + + F G L++ + N G     P  E   E++ LV+ TN   AF+ 
Sbjct: 62  DVRDEADVQRAVDAIVAAF-GGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYT 120

Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTN 196
            + A P L+  G   I+ +SS  G      G  Y+A+K  +   ++    +  +  I+ +
Sbjct: 121 IKAAVPALKRGGGY-IINISSLAGTNFFAGGAAYNASKFGLVGFSEAAMLDLRQYGIKVS 179

Query: 197 SVAPWYIRTPF 207
           ++ P  + T F
Sbjct: 180 TIMPGSVATHF 190

Length = 237

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score =  100 bits (251), Expect = 2e-25
 Identities = 62/212 (29%), Positives = 92/212 (43%), Gaps = 14/212 (6%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELN------------ECIHHLQ 65
           L G  A VTG ++G+G A+   L+  GATV   ++T +E +            E    ++
Sbjct: 1   LSGKVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIE 60

Query: 66  MKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLV 125
             G +    V DV    Q + L+      F G+L+I VNN G   L    +  A+ F L+
Sbjct: 61  AAGGQALPIVVDVRDEDQVRALVEATVDQF-GRLDILVNNAGAIWLSLVEDTPAKRFDLM 119

Query: 126 MSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLA 185
              N    + L Q A P +  +G   I+ +S  L +  A     Y+A K  M++L   LA
Sbjct: 120 QRVNLRGTYLLSQAALPHMVKAGQGHILNISPPLSLRPARGDVAYAAGKAGMSRLTLGLA 179

Query: 186 CEWAKDNIRTNSVAP-WYIRTPFTEPLLGNGK 216
            E  +  I  NS+ P   I TP    L G   
Sbjct: 180 AELRRHGIAVNSLWPSTAIETPAATELSGGSD 211

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score =  100 bits (250), Expect = 2e-25
 Identities = 75/244 (30%), Positives = 109/244 (44%), Gaps = 21/244 (8%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
           T LVTG TKG+GLA+   L+ LG  V   +R+  +           G       CD++  
Sbjct: 5   TVLVTGATKGIGLALSLRLANLGHQVIGIARSAID--------DFPGELFA---CDLADI 53

Query: 82  PQ-RQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLA 140
            Q   TL           ++  VNNVG ++ +P  + +      V   N  +A  + Q  
Sbjct: 54  EQTAATLAQINEI---HPVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAF 110

Query: 141 HPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAP 200
              ++      IV + S   I  A   T YSA K A+    +  A E A+  I  N+VAP
Sbjct: 111 LEGMKLREQGRIVNICS-RAIFGALDRTSYSAAKSALVGCTRTWALELAEYGITVNAVAP 169

Query: 201 WYIRTPF---TEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVC 257
             I T     T P+    +    V +  PM RLG P+EV++ +AFL    A +ITGQ + 
Sbjct: 170 GPIETELFRQTRPVGSEEE--KRVLASIPMRRLGTPEEVAAAIAFLLSDDAGFITGQVLG 227

Query: 258 IDGG 261
           +DGG
Sbjct: 228 VDGG 231

Length = 234

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score =  100 bits (251), Expect = 2e-25
 Identities = 73/254 (28%), Positives = 115/254 (45%), Gaps = 9/254 (3%)

Query: 19  QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSV-CD 77
                +VTGG++G+G  +V      GA V  C+R E         L   G      V CD
Sbjct: 8   ADKVVIVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAGPGSCKFVPCD 67

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGT-SVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           V+     +TLI+     F G+++  VNN G     + T E +A++F  +++ N  S F  
Sbjct: 68  VTKEEDIKTLISVTVERF-GRIDCLVNNAGWHPPHQTTDETSAQEFRDLLNLNLISYFLA 126

Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTN 196
            + A P LR S   +I+ +SS +G +       Y ATKGA+  + K LA + ++  +R N
Sbjct: 127 SKYALPHLRKS-QGNIINLSSLVGSIGQKQAAPYVATKGAITAMTKALAVDESRYGVRVN 185

Query: 197 SVAPWYIRTPFTEPLLGNGK----FVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT 252
            ++P  I TP  E L          + E +    +GR+G   E      FL    A++ T
Sbjct: 186 CISPGNIWTPLWEELAAQTPDTLATIKEGELAQLLGRMGTEAESGLAALFLA-AEATFCT 244

Query: 253 GQTVCIDGGFTVNG 266
           G  + + GG  +  
Sbjct: 245 GIDLLLSGGAELGY 258

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score =  100 bits (251), Expect = 2e-25
 Identities = 65/262 (24%), Positives = 106/262 (40%), Gaps = 30/262 (11%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATV-------HTCSRTETELNECIHHLQMKGLK 70
           LQG  AL+TG   G+G AV E     GA V               E+      + +    
Sbjct: 4   LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSL---- 59

Query: 71  VTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNF 130
                 DV+ +     ++      F G ++I  NN     + P L+ + + +  + + N 
Sbjct: 60  ------DVTRQDSIDRIVAAAVERF-GGIDILFNNAALFDMAPILDISRDSYDRLFAVNV 112

Query: 131 ESAFHLCQ--LAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEW 188
           +  F L Q    H + +  G   I+ M+S  G     + + Y ATK A+    ++ A   
Sbjct: 113 KGLFFLMQAVARHMVEQGRGG-KIINMASQAGRRGEALVSHYCATKAAVISYTQSAALAL 171

Query: 189 AKDNIRTNSVAPWYIRTPFTE---PLLGN--GKFVDEVKSRT----PMGRLGEPKEVSSL 239
            +  I  N++AP  + TP  +    L      +   E K       P+GR+G P +++ +
Sbjct: 172 IRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGM 231

Query: 240 VAFLCMPAASYITGQTVCIDGG 261
             FL    A YI  QT  +DGG
Sbjct: 232 ALFLASADADYIVAQTYNVDGG 253

Length = 257

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score =  100 bits (251), Expect = 3e-25
 Identities = 71/265 (26%), Positives = 110/265 (41%), Gaps = 28/265 (10%)

Query: 14  NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTG 73
           N     G T  VTG  +G+G AV       GA V        +       L  +      
Sbjct: 2   NAMDFSGKTVWVTGAAQGIGYAVALAFVEAGAKV-----IGFDQAF----LTQEDYPFAT 52

Query: 74  SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESA 133
            V DVS       +   + +   G L++ VN  G   +  T   + ED+    + N   A
Sbjct: 53  FVLDVSDAAAVAQVCQRLLAE-TGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGA 111

Query: 134 FHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTV----YSATKGAMNQLAKNLACEWA 189
           F+L +   P  R   + +IV + S     +A+V  +    Y A+K A+  LAK +  E A
Sbjct: 112 FNLFRAVMPQFRRQRSGAIVTVGSN----AAHVPRIGMAAYGASKAALTSLAKCVGLELA 167

Query: 190 KDNIRTNSVAPWYIRTPFTEPLLG---------NGKFVDEVKSRTPMGRLGEPKEVSSLV 240
              +R N V+P    T     L            G F ++ K   P+G++  P+E+++ V
Sbjct: 168 PYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAG-FPEQFKLGIPLGKIARPQEIANAV 226

Query: 241 AFLCMPAASYITGQTVCIDGGFTVN 265
            FL    AS+IT Q + +DGG T+ 
Sbjct: 227 LFLASDLASHITLQDIVVDGGATLG 251

Length = 252

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score =  100 bits (250), Expect = 4e-25
 Identities = 50/193 (25%), Positives = 91/193 (47%), Gaps = 2/193 (1%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK-GLKVTGSVC 76
           ++G TAL+TG + G+G  + ++L+  G  +   +R E +L      L+ K G++V     
Sbjct: 4   MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPA 63

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           D+S     + L + +     G +++ VNN G     P LE + ++   ++  N  +   L
Sbjct: 64  DLSDPEALERLEDELKERG-GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRL 122

Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTN 196
            +   P +   GA  I+ + SA G++      VYSATK  +   ++ L  E     ++  
Sbjct: 123 TKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAFVLSFSEALREELKGTGVKVT 182

Query: 197 SVAPWYIRTPFTE 209
           +V P   RT F +
Sbjct: 183 AVCPGPTRTEFFD 195

Length = 265

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score =  100 bits (250), Expect = 4e-25
 Identities = 76/274 (27%), Positives = 113/274 (41%), Gaps = 54/274 (19%)

Query: 19  QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDV 78
            G   +VTG  +G+G  V    +  GA V    R+E  ++E    L+  G +      D+
Sbjct: 7   AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAGGEALALTADL 65

Query: 79  SSRPQRQTLINTVSSLFNGKLNIFVNNVGTSV-LKPTLEYNAEDF------SLVMSTNFE 131
            +    Q  +      F G++++ +NNVG ++  KP  EY  E        SL   T   
Sbjct: 66  ETYAGAQAAMAAAVEAF-GRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSL-FPT--- 120

Query: 132 SAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEWAK 190
                C+   P + A G  +IV +SS   I +  +  V YSA KG +N L  +LA E+A+
Sbjct: 121 --LWCCRAVLPHMLAQGGGAIVNVSS---IATRGINRVPYSAAKGGVNALTASLAFEYAE 175

Query: 191 DNIRTNSVAP-----------------------WYIRTPFTEPLLGNGKFVDEVKSRTPM 227
             IR N+VAP                       WY             + VD+    + M
Sbjct: 176 HGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWY------------QQIVDQTLDSSLM 223

Query: 228 GRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGG 261
            R G   E  + + FL    ASYITG  + + GG
Sbjct: 224 KRYGTIDEQVAAILFLASDEASYITGTVLPVGGG 257

Length = 260

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 99.5 bits (248), Expect = 5e-25
 Identities = 82/248 (33%), Positives = 119/248 (47%), Gaps = 12/248 (4%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATVH-TCSRTETELNECIHHLQMKGLKVTGSVCDVSS 80
            ALVTGG++G+G A    L+  G TV     +      E ++ +   G K      D+S 
Sbjct: 3   IALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISD 62

Query: 81  RPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLE-YNAEDFSLVMSTNFESAFHLCQL 139
             Q   +   +    +  L   VNN G    + T+E   AE  + V+STN    F  C+ 
Sbjct: 63  ENQVVAMFTAIDQH-DEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCRE 121

Query: 140 A--HPLLRASG-AASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEWAKDNIRT 195
           A     L+  G   +IV +SSA   + A    V Y+A+KGA++ L   L+ E A   IR 
Sbjct: 122 AVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASKGAIDTLTTGLSLEVAAQGIRV 181

Query: 196 NSVAPWYIRTPFTEPLLGNGK--FVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG 253
           N V P +I   +TE     G+   VD VKS  PM R G+P+EV+  + +L    ASY+TG
Sbjct: 182 NCVRPGFI---YTEMHASGGEPGRVDRVKSNIPMQRGGQPEEVAQAIVWLLSDKASYVTG 238

Query: 254 QTVCIDGG 261
             + + GG
Sbjct: 239 SFIDLAGG 246

Length = 247

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 99.0 bits (246), Expect = 9e-25
 Identities = 72/253 (28%), Positives = 126/253 (49%), Gaps = 10/253 (3%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHT-CSRTETELNECIHHLQMKGLKVTGSV 75
           +L G  ALVTG ++G+G A+   L+  GA V     R +   +E I  ++  G K     
Sbjct: 3   NLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIE 62

Query: 76  CDVSSRPQRQTLINTVSS-----LFNGKLNIFVNNVGTSVLKPTLEYNAED-FSLVMSTN 129
            D++S    + L+  + +     +   +++I VNN G    + T+E   E+ F  +M+ N
Sbjct: 63  ADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGT-QGTIENTTEEIFDEIMAVN 121

Query: 130 FESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWA 189
            ++ F L Q   PLLRA G   ++ +SSA   +       Y  +KGA+N +   LA    
Sbjct: 122 IKAPFFLIQQTLPLLRAEG--RVINISSAEVRLGFTGSIAYGLSKGALNTMTLPLAKHLG 179

Query: 190 KDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAAS 249
           +  I  N++ P Y +T     LL + +  +   + +  GR+G+ ++++  VAFL    + 
Sbjct: 180 ERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVEDIADAVAFLASSDSR 239

Query: 250 YITGQTVCIDGGF 262
           ++TGQ + + GGF
Sbjct: 240 WVTGQIIDVSGGF 252

Length = 254

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 98.6 bits (245), Expect = 1e-24
 Identities = 70/251 (27%), Positives = 121/251 (48%), Gaps = 10/251 (3%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTETELNECIHHLQMKGLKVTGSV 75
           L+G  ALVTG ++G+G A+ + L+  GA   +H  +R E E  E ++ +Q  G       
Sbjct: 2   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKE-EAEETVYEIQSNGGSAFSIG 60

Query: 76  CDVSSRPQRQTLINTVSSLFNG-----KLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNF 130
            ++ S    + L +++ +         K +I +NN G        E   + F  ++S N 
Sbjct: 61  ANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNA 120

Query: 131 ESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAK 190
           ++ F + Q A   LR +  + I+ +SSA   +S      YS TKGA+N +   LA +   
Sbjct: 121 KAPFFIIQQALSRLRDN--SRIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLGA 178

Query: 191 DNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY 250
             I  N++ P +I+T     LL +        + +   RLGE ++++   AFL  P + +
Sbjct: 179 RGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSRW 238

Query: 251 ITGQTVCIDGG 261
           +TGQ + + GG
Sbjct: 239 VTGQLIDVSGG 249

Length = 252

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score = 98.1 bits (244), Expect = 1e-24
 Identities = 72/243 (29%), Positives = 113/243 (46%), Gaps = 12/243 (4%)

Query: 24  LVTGGTKGLGLAVVEELSMLG--ATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
           LVTG ++G+G A+   L+  G    VH      ++    +  +Q +G        DV+ R
Sbjct: 2   LVTGASRGIGRAIANRLAADGFEICVH-YHSGRSDAESVVSAIQAQGGNARLLQFDVADR 60

Query: 82  PQ-RQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQ-L 139
              R  L   ++   +G     V N G +        + ED+ +V+ TN +  +++    
Sbjct: 61  VACRTLLEADIAE--HGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPC 118

Query: 140 AHPLLRASGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEWAKDNIRTNSV 198
             P++RA     I+ ++S  G++  N G V YSA K  +    K LA E AK  I  N +
Sbjct: 119 TMPMIRARQGGRIITLASVSGVM-GNRGQVNYSAAKAGLIGATKALAVELAKRKITVNCI 177

Query: 199 APWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCI 258
           AP  I T     +      +DE     PM R+G+P EV+SL  FL    ASY+T Q + +
Sbjct: 178 APGLIDTEMLAEV---EHDLDEALKTVPMNRMGQPAEVASLAGFLMSDGASYVTRQVISV 234

Query: 259 DGG 261
           +GG
Sbjct: 235 NGG 237

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score = 98.7 bits (246), Expect = 2e-24
 Identities = 75/253 (29%), Positives = 123/253 (48%), Gaps = 14/253 (5%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSV- 75
           S Q  T LVTGG  G+G  V   L   GA V    R   +L       +++ LK  G+V 
Sbjct: 4   SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAE--EIEALKGAGAVR 61

Query: 76  ---CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTS-VLKPTLEYNAEDFSLVMSTNFE 131
               DV+   Q    ++  ++ ++G+L+  V+  G S  + P  + +++ +   +  N  
Sbjct: 62  YEPADVTDEDQVARAVDAATA-WHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVN 120

Query: 132 SAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGT---VYSATKGAMNQLAKNLACEW 188
              ++ + A   L   G  S V +SS   I ++N       Y  TK A++ L K  A E 
Sbjct: 121 GTMYVLKHAARELVRGGGGSFVGISS---IAASNTHRWFGAYGVTKSAVDHLMKLAADEL 177

Query: 189 AKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAA 248
               +R NS+ P  IRT    P+  + +   + ++ TP+ R+GE ++V++L  FL   AA
Sbjct: 178 GPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTPLPRVGEVEDVANLAMFLLSDAA 237

Query: 249 SYITGQTVCIDGG 261
           S+ITGQ + +DGG
Sbjct: 238 SWITGQVINVDGG 250

Length = 276

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 97.7 bits (243), Expect = 2e-24
 Identities = 65/250 (26%), Positives = 117/250 (46%), Gaps = 4/250 (1%)

Query: 14  NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTG 73
             + L G  A++TG   GLG  +   L+  GA +      E    E    ++  G K   
Sbjct: 2   QLFDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAP--ETQAQVEALGRKFHF 59

Query: 74  SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESA 133
              D+  +    ++++    +  G ++I +NN G    +  LE+  +D+  V++ N ++ 
Sbjct: 60  ITADLIQQKDIDSIVSQAVEVM-GHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTV 118

Query: 134 FHLCQ-LAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDN 192
           F L Q +A   ++      I+ ++S L          Y+A+K A+  L + LA E ++ N
Sbjct: 119 FFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKSAVMGLTRALATELSQYN 178

Query: 193 IRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT 252
           I  N++AP Y+ T  T  L  +    + +  R P  R G P +++    FL   A+ Y+T
Sbjct: 179 INVNAIAPGYMATDNTAALRADTARNEAILERIPASRWGTPDDLAGPAIFLSSSASDYVT 238

Query: 253 GQTVCIDGGF 262
           G T+ +DGG+
Sbjct: 239 GYTLAVDGGW 248

Length = 251

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 97.5 bits (243), Expect = 3e-24
 Identities = 62/256 (24%), Positives = 106/256 (41%), Gaps = 26/256 (10%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNE-CIHHLQMKGLKVTGSVCDVSS 80
             LVTG ++GLG A+    +  GA V       TE  E        + + +     DV  
Sbjct: 2   VVLVTGASRGLGAAIARSFAREGARVVVNYYRSTESAEAVAAEAGERAIAIQA---DVRD 58

Query: 81  RPQRQTLINTVSSLFNGKLNIFVNN-VGTSVLKP-------TLEYNAEDFSLVMSTNFES 132
           R Q Q +I    + F G ++  VNN +      P       T+++  ED+   +    + 
Sbjct: 59  RDQVQAMIEEAKNHF-GPVDTIVNNALIDFPFDPDQRKTFDTIDW--EDYQQQLEGAVKG 115

Query: 133 AFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTV----YSATKGAMNQLAKNLACEW 188
           A +L Q   P  +  G+  ++ + + L         V    Y+  K A+    +N+A E 
Sbjct: 116 ALNLLQAVLPDFKERGSGRVINIGTNL----FQNPVVPYHDYTTAKAALLGFTRNMAKEL 171

Query: 189 AKDNIRTNSVAPWYIRTPFTEPLLGNGK-FVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA 247
               I  N V+   ++   T+      K   D +   TP+G++  P++++  V F   P 
Sbjct: 172 GPYGITVNMVSGGLLKV--TDASAATPKEVFDAIAQTTPLGKVTTPQDIADAVLFFASPW 229

Query: 248 ASYITGQTVCIDGGFT 263
           A  +TGQ + +DGG  
Sbjct: 230 ARAVTGQNLVVDGGLV 245

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 97.6 bits (243), Expect = 3e-24
 Identities = 67/270 (24%), Positives = 102/270 (37%), Gaps = 54/270 (20%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
           T ++TG   G+G A  E L   G TV      E ++                   D+S+ 
Sbjct: 1   TIVITGAASGIGAATAELLEDAGHTVIGIDLREADVI-----------------ADLSTP 43

Query: 82  PQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAH 141
             R   I  V +  +G L+  VN  G                LV+  N+     L +   
Sbjct: 44  EGRAAAIADVLARCSGVLDGLVNCAGVGGTTVA--------GLVLKVNYFGLRALMEALL 95

Query: 142 PLLRASGAASIVLMSSALGIVSAN---------------------------VGTVYSATK 174
           P LR     + V++SS  G   A                                Y+ +K
Sbjct: 96  PRLRKGHGPAAVVVSSIAGAGWAQDKLELAKALAAGTEARAVALAEHAGQPGYLAYAGSK 155

Query: 175 GAMNQLAKNLACEWAKD-NIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKS-RTPMGRLGE 232
            A+    +  A  W     +R N+VAP  + TP  +  L + +  + V +  TPMGR  E
Sbjct: 156 EALTVWTRRRAATWLYGAGVRVNTVAPGPVETPILQAFLQDPRGGESVDAFVTPMGRRAE 215

Query: 233 PKEVSSLVAFLCMPAASYITGQTVCIDGGF 262
           P E++ ++AFL   AAS+I G  + +DGG 
Sbjct: 216 PDEIAPVIAFLASDAASWINGANLFVDGGL 245

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 97.1 bits (242), Expect = 4e-24
 Identities = 64/253 (25%), Positives = 114/253 (45%), Gaps = 4/253 (1%)

Query: 20  GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVS 79
               ++TGG+ G+G A+ +  +  GA V    RT+ +L E    ++    +V     DV 
Sbjct: 1   EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVR 60

Query: 80  SRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQL 139
           +    Q ++  +   F G+++  +NN   + + P  + +   ++ V+       F+  Q 
Sbjct: 61  NPEDVQKMVEQIDEKF-GRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQA 119

Query: 140 AHPLLRASGAASIVLMSSALGIVSANVGTVYSAT-KGAMNQLAKNLACEWAKD-NIRTNS 197
                   G    ++   A     A  G ++SA  K  +  + + LA EW +   IR N+
Sbjct: 120 VGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNA 179

Query: 198 VAPWYI-RTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTV 256
           +AP  I RT   + L  + +         P+GRLG P+E++ L  FL    A+YI G  +
Sbjct: 180 IAPGPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAGLAYFLLSDEAAYINGTCI 239

Query: 257 CIDGGFTVNGFFF 269
            +DGG  +N + F
Sbjct: 240 TMDGGQWLNQYPF 252

Length = 252

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 96.2 bits (240), Expect = 5e-24
 Identities = 52/197 (26%), Positives = 78/197 (39%), Gaps = 11/197 (5%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
            L G T L+TGGT G+GLA+  +    G TV    R E  L E     + +   +   V 
Sbjct: 2   KLTGNTVLITGGTSGIGLALARKFLEAGNTVIITGRREERLAE----AKKELPNIHTIVL 57

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGT----SVLKPTLEYNAEDFSLVMSTNFES 132
           DV      + L   + S +   L+I +NN G      +  P  +   +     + TN   
Sbjct: 58  DVGDAESVEALAEALLSEYP-NLDILINNAGIQRPIDLRDPASD--LDKADTEIDTNLIG 114

Query: 133 AFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDN 192
              L +   P L+    A+IV +SS L  V      VY ATK A++     L  +     
Sbjct: 115 PIRLIKAFLPHLKKQPEATIVNVSSGLAFVPMAANPVYCATKAALHSYTLALRHQLKDTG 174

Query: 193 IRTNSVAPWYIRTPFTE 209
           +    + P  + T   E
Sbjct: 175 VEVVEIVPPAVDTELHE 191

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 96.9 bits (242), Expect = 8e-24
 Identities = 48/204 (23%), Positives = 78/204 (38%), Gaps = 21/204 (10%)

Query: 20  GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHL--QMKGLKVTGSVCD 77
           G   ++TG   G+G     EL+  GA V    R E +  E    +  +    KV     D
Sbjct: 1   GKVVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAKVEVIQLD 60

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           +SS    +       + F  +L+I +NN G  ++ P      + F L  + N+   F L 
Sbjct: 61  LSSLASVRQFAEEFLARFP-RLDILINNAG--IMAPPRRLTKDGFELQFAVNYLGHFLLT 117

Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVGT---------------VYSATKGAMNQLAK 182
            L  P+L+AS  + IV +SS     +  +                  Y  +K A     +
Sbjct: 118 NLLLPVLKASAPSRIVNVSSIA-HRAGPIDFNDLDLENNKEYSPYKAYGQSKLANILFTR 176

Query: 183 NLACEWAKDNIRTNSVAPWYIRTP 206
            LA       +  N++ P  +RT 
Sbjct: 177 ELARRLEGTGVTVNALHPGVVRTE 200

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 96.1 bits (239), Expect = 8e-24
 Identities = 57/193 (29%), Positives = 88/193 (45%), Gaps = 3/193 (1%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           LQG  ALVTG + G+G A    L+  GA V   +R    L      L+ +G K      D
Sbjct: 1   LQGKVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAEGGKALVLELD 60

Query: 78  VSSRPQ-RQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           V+   Q    +  TV +L  G+L+I VNN G  +L P  + +  D++ ++ TN     + 
Sbjct: 61  VTDEQQVDAAVERTVEAL--GRLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYT 118

Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTN 196
              A P        +IV +SS  G V+     VY+ATK  +N  ++ L  E  +  +R  
Sbjct: 119 THAALPHHLLRNKGTIVNISSVAGRVAVRNSAVYNATKFGVNAFSEGLRQEVTERGVRVV 178

Query: 197 SVAPWYIRTPFTE 209
            + P  + T   +
Sbjct: 179 VIEPGTVDTELRD 191

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 97.2 bits (242), Expect = 8e-24
 Identities = 75/256 (29%), Positives = 113/256 (44%), Gaps = 8/256 (3%)

Query: 10  HSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATV--HTCSRTETELNECIHHLQMK 67
            S +    LQG  AL+TG   G+G A     +  GA +  +     E +  E +  +Q +
Sbjct: 45  QSYKGFGRLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAE 104

Query: 68  GLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSV-LKPTLEYNAEDFSLVM 126
           G K      D+      + L+        G L+I VN  G    +K   +   E F    
Sbjct: 105 GRKAVALPGDLKDEAFCRQLVERAVKELGG-LDILVNIAGKQTAVKDIADITTEQFDATF 163

Query: 127 STNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLAC 186
            TN  + F LC+ A P L     ASI+   S      +     Y++TK A+    K LA 
Sbjct: 164 KTNVYAMFWLCKAAIPHLPP--GASIINTGSIQSYQPSPTLLDYASTKAAIVAFTKALAK 221

Query: 187 EWAKDNIRTNSVAPWYIRTPFTEPLLGN-GKFVDEVKSRTPMGRLGEPKEVSSLVAFLCM 245
           + A+  IR N+VAP  + TP  +P  G   + + +  S TPM R G+P E++ L   L  
Sbjct: 222 QVAEKGIRVNAVAPGPVWTPL-QPSGGQPPEKIPDFGSETPMKRPGQPVEMAPLYVLLAS 280

Query: 246 PAASYITGQTVCIDGG 261
             +SY+TG+   + GG
Sbjct: 281 QESSYVTGEVFGVTGG 296

Length = 300

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 95.5 bits (238), Expect = 1e-23
 Identities = 55/189 (29%), Positives = 90/189 (47%), Gaps = 1/189 (0%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           SLQG  AL+TG  +G+G AV   L+  G  V   +RTE  L      ++  G+KV  +  
Sbjct: 4   SLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATA 63

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           DVS   +    I  + +   G ++I +NN G S     LE +  ++  ++  N    ++ 
Sbjct: 64  DVSDYEEVTAAIEQLKNEL-GSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYA 122

Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTN 196
            +   P +    +  I+ +SS  G   A V + YSA+K  +  L ++L  E  K NIR  
Sbjct: 123 TRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKFGVLGLTESLMQEVRKHNIRVT 182

Query: 197 SVAPWYIRT 205
           ++ P  + T
Sbjct: 183 ALTPSTVAT 191

Length = 239

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score = 95.8 bits (239), Expect = 1e-23
 Identities = 69/255 (27%), Positives = 113/255 (44%), Gaps = 17/255 (6%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L+    +VTGG  G+G A+   L+  GA      R+  + +E    L+    +      D
Sbjct: 5   LKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPD-DEFAEELRALQPRAEFVQVD 63

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGT--SVLKPTLEYNAEDFSLVMSTNFESAFH 135
           ++   Q +  +    + F G+++  VNN G    V    LE   E F   +  N    + 
Sbjct: 64  LTDDAQCRDAVEQTVAKF-GRIDGLVNNAGVNDGV---GLEAGREAFVASLERNLIHYYV 119

Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRT 195
           +     P L+AS  A IV +SS   +      + Y+A KGA   L +  A   AKD +R 
Sbjct: 120 MAHYCLPHLKASRGA-IVNISSKTALTGQGGTSGYAAAKGAQLALTREWAVALAKDGVRV 178

Query: 196 NSVAPWYIRTPFTEPLLGNGKFVD------EVKSRTPMG-RLGEPKEVSSLVAFLCMPAA 248
           N+V P  + TP  E  +    F D       + ++ P+G R+   +E++    FL    +
Sbjct: 179 NAVIPAEVMTPLYENWIAT--FDDPEAKLAAITAKIPLGHRMTTAEEIADTAVFLLSERS 236

Query: 249 SYITGQTVCIDGGFT 263
           S+ TGQ + +DGG+ 
Sbjct: 237 SHTTGQWLFVDGGYV 251

Length = 258

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 95.5 bits (238), Expect = 2e-23
 Identities = 71/263 (26%), Positives = 111/263 (42%), Gaps = 27/263 (10%)

Query: 17  SLQGMTALVTGGTK--GLGLAVVEELSMLGATV--HTCSRTETELNECIHHLQ----MKG 68
            L    ALVTG ++  G+G AV   L+  G  +     S  +  +   +H  +     + 
Sbjct: 2   PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEE 61

Query: 69  LKVTGSVC-----DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFS 123
           ++  G  C     D+S       +   VS    G  +I +NN   S      E  AE   
Sbjct: 62  IESYGVRCEHMEIDLSQPYAPNRVFYAVSERL-GDPSILINNAAYSTHTRLEELTAEQLD 120

Query: 124 LVMSTNFESAFHLCQL--AHPLLRASGAASIVLMSSA--LGIVSANVGTVYSATKGAMNQ 179
              + N  +   L          +A G   I+ ++S   LG +   +   Y+ATKGA+  
Sbjct: 121 KHYAVNVRATMLLSSAFAKQYDGKAGG--RIINLTSGQSLGPMPDELA--YAATKGAIEA 176

Query: 180 LAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSL 239
             K+LA E A+  I  N+V P    T +    L +      +  + P GR+GEP + + L
Sbjct: 177 FTKSLAPELAEKGITVNAVNPGPTDTGWITEELKH-----HLVPKFPQGRVGEPVDAARL 231

Query: 240 VAFLCMPAASYITGQTVCIDGGF 262
           +AFL    A +ITGQ +  +GGF
Sbjct: 232 IAFLVSEEAKWITGQVIHSEGGF 254

Length = 256

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 94.6 bits (236), Expect = 4e-23
 Identities = 72/254 (28%), Positives = 111/254 (43%), Gaps = 12/254 (4%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L+G   +V+G   GLG  +    +  GA V   +RT   L+E    +   G +      D
Sbjct: 3   LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTD 62

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGT-SVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           ++   Q   L+      F G+++  VNN      +KP  + +   +  V+  N      L
Sbjct: 63  ITDEDQCANLVALALERF-GRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRL 121

Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTN 196
            Q   P L  SG  SIV+++S +   S      Y   KGA+   +++LA E     IR N
Sbjct: 122 TQAFTPALAESGG-SIVMINSMVLRHSQPKYGAYKMAKGALLAASQSLATELGPQGIRVN 180

Query: 197 SVAPWYI-----RTPFTEPLLGNGKFVDEV----KSRTPMGRLGEPKEVSSLVAFLCMPA 247
           SVAP YI     +  F       G  V+++     + + + RL    EV+S V FL    
Sbjct: 181 SVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVASAVLFLASDL 240

Query: 248 ASYITGQTVCIDGG 261
           A  ITGQT+ ++ G
Sbjct: 241 ARAITGQTLDVNCG 254

Length = 258

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score = 94.2 bits (234), Expect = 5e-23
 Identities = 60/245 (24%), Positives = 105/245 (42%), Gaps = 7/245 (2%)

Query: 20  GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVS 79
           G  A+VTGG  G+G  +  +    G  V      + +        + +G  +     DV+
Sbjct: 1   GKVAIVTGGGHGIGKQICLDFLEAGDKV---VFADIDEERGADFAEAEGPNLFFVHGDVA 57

Query: 80  SRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQL 139
                + ++  +     G++++ VNN              E++  ++S N    + L + 
Sbjct: 58  DETLVKFVVYAMLEKL-GRIDVLVNNAARGSKGILSSLLLEEWDRILSVNLTGPYELSRY 116

Query: 140 AHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVA 199
               L  +    I+ ++S     S      Y+A+KG +  L   LA     D IR N ++
Sbjct: 117 CRDELIKNKGR-IINIASTRAFQSEPDSEAYAASKGGLVALTHALAMSLGPD-IRVNCIS 174

Query: 200 PWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCID 259
           P +I T   +          E  ++ P GR+G PK++++LV FLC   A +ITG+T  +D
Sbjct: 175 PGWINTTEQQEF-TAAPLTQEDHAQHPAGRVGTPKDIANLVLFLCQQDAGFITGETFIVD 233

Query: 260 GGFTV 264
           GG T 
Sbjct: 234 GGMTK 238

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 94.1 bits (234), Expect = 5e-23
 Identities = 73/263 (27%), Positives = 119/263 (45%), Gaps = 30/263 (11%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG-------LK 70
           L+G  ALVTG + GLG    + L+  GA V   SR    L E    ++ +G       L 
Sbjct: 7   LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLD 66

Query: 71  VTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNF 130
           VT      ++    +T          G ++I VNN G S  +  ++    DF  V  TN 
Sbjct: 67  VTDYQSIKAAVAHAETEA--------GTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNT 118

Query: 131 ESAFHLCQ-LAHPLL-RASGAAS------IVLMSSALGI-VSANVGTVYSATKGAMNQLA 181
             AF + Q +A  ++ RA GA +      I+ ++S  G+ V   +G +Y  +K A+  + 
Sbjct: 119 RGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIG-LYCMSKAAVVHMT 177

Query: 182 KNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN--GKFVDEVKSRTPMGRLGEPKEVSSL 239
           + +A EW +  I  N++ P YI T           G+   ++ S  P  R+G+P+++  L
Sbjct: 178 RAMALEWGRHGINVNAICPGYIDTEINHHHWETEQGQ---KLVSMLPRKRVGKPEDLDGL 234

Query: 240 VAFLCMPAASYITGQTVCIDGGF 262
           +  L    + +I G  +  D GF
Sbjct: 235 LLLLAADESQFINGAIISADDGF 257

Length = 258

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 93.5 bits (233), Expect = 8e-23
 Identities = 50/191 (26%), Positives = 78/191 (40%), Gaps = 4/191 (2%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
             L+TGG  G+G  +  E +  GA V      E    E  ++++  G KV    CDVS R
Sbjct: 1   IVLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAGGKVHYYKCDVSKR 60

Query: 82  PQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAH 141
            +       +     G + I +NN G    K  LE   E+       N  + F   +   
Sbjct: 61  EEVYEAAKKIKKEV-GDVTILINNAGVVSGKKLLELPDEEIEKTFEVNTLAHFWTTKAFL 119

Query: 142 PLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACE---WAKDNIRTNSV 198
           P +       IV ++S  G++S      Y A+K A     ++L  E   + K  I+T  V
Sbjct: 120 PDMLERNHGHIVTIASVAGLISPAGLADYCASKAAAVGFHESLRLELKAYGKPGIKTTLV 179

Query: 199 APWYIRTPFTE 209
            P++I T   +
Sbjct: 180 CPYFINTGMFQ 190

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 93.0 bits (232), Expect = 1e-22
 Identities = 54/201 (26%), Positives = 87/201 (43%), Gaps = 8/201 (3%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETEL----NECIHHLQMKGLKVTG 73
           LQG   ++TG + G+G  +   L+ LGA +   +R E  L    +EC   L++       
Sbjct: 1   LQGKVVIITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSEC---LELGAPSPHV 57

Query: 74  SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESA 133
              D+S     + ++     LF G L+I +NN G S+     + + +    +M  N+   
Sbjct: 58  VPLDMSDLEDAEQVVEEALKLF-GGLDILINNAGISMRSLFHDTSIDVDRKIMEVNYFGP 116

Query: 134 FHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNI 193
             L + A P L      SIV++SS  G +     T Y+A+K A+     +L  E ++ NI
Sbjct: 117 VALTKAALPHLIERSQGSIVVVSSIAGKIGVPFRTAYAASKHALQGFFDSLRAELSEPNI 176

Query: 194 RTNSVAPWYIRTPFTEPLLGN 214
               V P  I T      L  
Sbjct: 177 SVTVVCPGLIDTNIAMNALSG 197

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 92.8 bits (231), Expect = 2e-22
 Identities = 78/251 (31%), Positives = 115/251 (45%), Gaps = 18/251 (7%)

Query: 18  LQGMTALVTG--GTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHL--QMKGLKVTG 73
           L G   LVT   GT G+G A        GA V      E  L E    L  ++   +V  
Sbjct: 15  LAGKVVLVTAAAGT-GIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEA 73

Query: 74  SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESA 133
            VCDV+S  Q   LI+       G+L++ VNN G     P ++   +++S V+       
Sbjct: 74  VVCDVTSEAQVDALIDAAVERL-GRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGT 132

Query: 134 FHLCQLAHPLLRASGAAS-IVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDN 192
           F   + A   +RA G    IV  +S LG  + +    Y+A K  +  L +  A E A+  
Sbjct: 133 FRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAAKAGVMALTRCSALEAAEYG 192

Query: 193 IRTNSVAPWYIRTPF-----TEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA 247
           +R N+VAP     PF     +  LL      DE+ +R   GR  EP EV++++AFL    
Sbjct: 193 VRINAVAPSIAMHPFLAKVTSAELL------DELAAREAFGRAAEPWEVANVIAFLASDY 246

Query: 248 ASYITGQTVCI 258
           +SY+TG+ V +
Sbjct: 247 SSYLTGEVVSV 257

Length = 262

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 92.9 bits (231), Expect = 2e-22
 Identities = 61/243 (25%), Positives = 101/243 (41%), Gaps = 5/243 (2%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
           TALVTG   G+G A+       G  V         L      L     +     CD++  
Sbjct: 4   TALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADAL--GDARFVPVACDLTDA 61

Query: 82  PQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAH 141
                 +   ++   G +++ V N G +      +     +    + N E+A+   +   
Sbjct: 62  ASLAAALANAAAER-GPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVL 120

Query: 142 PLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPW 201
             +      ++V + S  G ++A     YSA K  +    K LA E+ +  IR N+VAP 
Sbjct: 121 EGMLKRSRGAVVNIGSVNG-MAALGHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPG 179

Query: 202 YIRTPFTEP-LLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDG 260
            ++T   E  +  N +  +E+K   P+     P +V++ V FL  PAA  ITG  + +DG
Sbjct: 180 TVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAVLFLASPAARAITGVCLPVDG 239

Query: 261 GFT 263
           G T
Sbjct: 240 GLT 242

Length = 257

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 92.8 bits (231), Expect = 2e-22
 Identities = 81/261 (31%), Positives = 113/261 (43%), Gaps = 20/261 (7%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L+G  AL+TGG  GLG A+VE     GA V    R+  ++ E        G  V G   D
Sbjct: 2   LKGEVALITGGGSGLGRALVERFVAEGAKVAVLDRSAEKVAELRA---DFGDAVVGVEGD 58

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVG-----TSVLKPTLEYNAEDFSLVMSTNFES 132
           V S    +  +      F GKL+ F+ N G     TS++    E   E F  +   N + 
Sbjct: 59  VRSLADNERAVARCVERF-GKLDCFIGNAGIWDYSTSLVDIPEEKLDEAFDELFHINVKG 117

Query: 133 AFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDN 192
                + A P L A+   S++   S  G      G +Y+A+K A+  L K LA E A  +
Sbjct: 118 YILGAKAALPALYATE-GSVIFTVSNAGFYPGGGGPLYTASKHAVVGLVKQLAYELAP-H 175

Query: 193 IRTNSVAPWYIRTPFTEPL-LGNGKFV-------DEVKSRTPMGRLGEPKEVSSLVAFLC 244
           IR N VAP  + T    P  LG G+         D +KS  P+G   EP++ +    FL 
Sbjct: 176 IRVNGVAPGGMVTDLRGPASLGQGETSISTPPLDDMLKSILPLGFAPEPEDYTGAYVFLA 235

Query: 245 MPAAS-YITGQTVCIDGGFTV 264
               +   TG  +  DGG  V
Sbjct: 236 SRGDNRPATGTVINYDGGMGV 256

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 92.4 bits (230), Expect = 2e-22
 Identities = 68/256 (26%), Positives = 107/256 (41%), Gaps = 24/256 (9%)

Query: 20  GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVS 79
           G+ A+VTGG  GLGLA VE L   GA V       +        +   G        DV+
Sbjct: 2   GLVAVVTGGASGLGLATVERLLAQGAKVVILDLPNSPGET----VAKLGDNCRFVPVDVT 57

Query: 80  SRPQRQTLINTVSSLFNGKLNIFVNNVGTSV------LKPTLEYNAEDFSLVMSTNFESA 133
           S    +  +    + F G+L+I VN  G +V       K    ++ E F  V++ N    
Sbjct: 58  SEKDVKAALALAKAKF-GRLDIVVNCAGIAVAAKTYNKKGQQPHSLELFQRVINVNLIGT 116

Query: 134 FHLCQLAHPLLRASGAAS------IVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLAC 186
           F++ +LA   +  +          I+  +S        +G   YSA+KG +  +   +A 
Sbjct: 117 FNVIRLAAGAMGKNEPDQGGERGVIINTASVAAF-EGQIGQAAYSASKGGIVGMTLPIAR 175

Query: 187 EWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPM-GRLGEPKEVSSLVAFLCM 245
           + A   IR  ++AP    TP    L    K  D +  + P   RLG+P E + LV  +  
Sbjct: 176 DLAPQGIRVVTIAPGLFDTPLLAGL--PEKVRDFLAKQVPFPSRLGDPAEYAHLVQHII- 232

Query: 246 PAASYITGQTVCIDGG 261
               Y+ G+ + +DG 
Sbjct: 233 -ENPYLNGEVIRLDGA 247

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 91.7 bits (228), Expect = 2e-22
 Identities = 52/223 (23%), Positives = 93/223 (41%), Gaps = 13/223 (5%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
            ALVTG ++G+G+ +   L+  G  V    R   +L      L   G  V     D    
Sbjct: 2   VALVTGASRGIGIEIARALARDGYRVSLGLRNPEDLAA----LSASGGDVEAVPYDARDP 57

Query: 82  PQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAH 141
              + L++ +   F G++++ V+N G        E +  +     S N  +   L +   
Sbjct: 58  EDARALVDALRDRF-GRIDVLVHNAGIGRPTTLREGSDAELEAHFSINVIAPAELTRALL 116

Query: 142 PLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPW 201
           P LR +G+  +V ++S  G         YSA+K A+  LA  L  E     +R ++V P 
Sbjct: 117 PALREAGSGRVVFLNSLSGKRVLAGNAGYSASKFALRALAHALRQEGWDHGVRVSAVCPG 176

Query: 202 YIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLC 244
           ++ TP  +           +    P   + +PK++++LV  + 
Sbjct: 177 FVDTPMAQ--------GLTLVGAFPPEEMIQPKDIANLVRMVI 211

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 89.7 bits (223), Expect = 2e-21
 Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 1/187 (0%)

Query: 23  ALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRP 82
            L+TG + G+G A+  E +  G  V   +R    L+E    L      V   + DV+   
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELLNPNPSVEVEILDVTDEE 60

Query: 83  QRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHP 142
           + Q +I  + +   G L++ + N G        + + + F   + TN   A  + + A P
Sbjct: 61  RNQLVIAELEAELGG-LDLVIINAGVGKGTSLGDLSFKAFRETIDTNLLGAAAILEAALP 119

Query: 143 LLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWY 202
             RA G   +VL+SS   +        YSA+K A++ LA++L  +  K  IR   + P +
Sbjct: 120 QFRAKGRGHLVLISSVAALRGLPGAAAYSASKAALSSLAESLRYDVKKRGIRVTVINPGF 179

Query: 203 IRTPFTE 209
           I TP T 
Sbjct: 180 IDTPLTA 186

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 89.6 bits (222), Expect = 3e-21
 Identities = 60/256 (23%), Positives = 100/256 (39%), Gaps = 18/256 (7%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L G TAL+TG  +G+G A  +     GA     +  +  L          G        D
Sbjct: 1   LDGKTALITGSARGIGRAFAQAYVREGAR---VAIADINLEAARATAAEIGPAACAISLD 57

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           V+ +      +  +   + G ++I VNN     L P ++   E +  + + N      + 
Sbjct: 58  VTDQASIDRCVAALVDRW-GSIDILVNNAALFDLAPIVDITRESYDRLFAINVSGTLFMM 116

Query: 138 QLAHPLLRASG-AASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTN 196
           Q     + A G    I+ M+S  G     +  VY ATK A+  L ++      +  I  N
Sbjct: 117 QAVARAMIAQGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVN 176

Query: 197 SVAPWYIRTPFTEPLLGNGKFVD-----------EVKSRTPMGRLGEPKEVSSLVAFLCM 245
           ++AP  +     + +  + KF              V    P GR+G  ++++ +  FL  
Sbjct: 177 AIAPGVVDGEHWDGV--DAKFARYENRPRGEKKRLVGEAVPFGRMGRAEDLTGMAIFLAS 234

Query: 246 PAASYITGQTVCIDGG 261
             A YI  QT  +DGG
Sbjct: 235 TDADYIVAQTYNVDGG 250

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 89.3 bits (222), Expect = 3e-21
 Identities = 53/205 (25%), Positives = 79/205 (38%), Gaps = 21/205 (10%)

Query: 23  ALVTGGTKGLGLAVVEELSMLGATVHTCSRTE-----TELNECIHHLQMKGLKVTGSVCD 77
           A++TGG  G+GLA  + L   GA V    R E      EL           +K T   CD
Sbjct: 3   AIITGGASGIGLATAKLLLKKGAKVAILDRNENPGAAAELQA-----INPKVKATFVQCD 57

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFS----LVMSTNFESA 133
           V+S  Q           F G+++I +NN G  +L       A          +  N    
Sbjct: 58  VTSWEQLAAAFKKAIEKF-GRVDILINNAG--ILDEKSYLFAGKLPPPWEKTIDVNLTGV 114

Query: 134 FHLCQLAHPLLRAS---GAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEW-A 189
            +   LA   +  +       IV + S  G+  A    VYSA+K  +    ++LA     
Sbjct: 115 INTTYLALHYMDKNKGGKGGVIVNIGSVAGLYPAPQFPVYSASKHGVVGFTRSLADLLEY 174

Query: 190 KDNIRTNSVAPWYIRTPFTEPLLGN 214
           K  +R N++ P +  TP    L+  
Sbjct: 175 KTGVRVNAICPGFTNTPLLPDLVAK 199

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 88.9 bits (221), Expect = 3e-21
 Identities = 56/203 (27%), Positives = 86/203 (42%), Gaps = 9/203 (4%)

Query: 23  ALVTGGTKGLGLAVVEELSMLG-ATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
            L+TG ++G+GL +V +L   G  TV    R  +   E +  L     ++     DV+  
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAATE-LAALGASHSRLHILELDVTDE 59

Query: 82  PQRQTLINTVSSLF-NGKLNIFVNNVGT-SVLKPTLEYNAEDFSLVMSTNFESAFHLCQL 139
                    V+    +  L++ +NN G      P  E ++ED   V   N      L Q 
Sbjct: 60  IAES--AEAVAERLGDAGLDVLINNAGILHSYGPASEVDSEDLLEVFQVNVLGPLLLTQA 117

Query: 140 AHPLLRASGAASIVLMSSALGIVSANV---GTVYSATKGAMNQLAKNLACEWAKDNIRTN 196
             PLL     A I+ +SS +G +  N       Y A+K A+N L K+LA E  +D I   
Sbjct: 118 FLPLLLKGARAKIINISSRVGSIGDNTSGGWYSYRASKAALNMLTKSLAVELKRDGITVV 177

Query: 197 SVAPWYIRTPFTEPLLGNGKFVD 219
           S+ P ++RT    P   N   + 
Sbjct: 178 SLHPGWVRTDMGGPFAKNKGPIT 200

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 88.9 bits (221), Expect = 5e-21
 Identities = 73/266 (27%), Positives = 109/266 (40%), Gaps = 30/266 (11%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK-GLKVTGSVC 76
           L G   L+TG +KG+G A  E  +  G  +H  +R    L      L+   G+ V     
Sbjct: 5   LAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHAL 64

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGT----SVLKPTLEYNAEDFSL-VMSTNFE 131
           D+SS   R+ L         G ++I VNN G      +           + L V      
Sbjct: 65  DLSSPEAREQLAAEA-----GDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGY--- 116

Query: 132 SAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVY---SATKGAMNQLAKNLACEW 188
               L +LA+P ++A G+  IV   + +G    N    Y   SA   A+    + L  + 
Sbjct: 117 --IDLTRLAYPRMKARGSGVIV---NVIGAAGENPDADYICGSAGNAALMAFTRALGGKS 171

Query: 189 AKDNIRTNSVAPWYIRTPFTEPL--------LGNGKFVDEVKSRTPMGRLGEPKEVSSLV 240
             D +R   V P  + T     L        LG+     E+ +  P+GR   P+EV+ LV
Sbjct: 172 LDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLV 231

Query: 241 AFLCMPAASYITGQTVCIDGGFTVNG 266
           AFL  P + Y +G  V +DGG +  G
Sbjct: 232 AFLASPRSGYTSGTVVTVDGGISARG 257

Length = 259

>gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

 Score = 88.3 bits (219), Expect = 1e-20
 Identities = 80/267 (29%), Positives = 117/267 (43%), Gaps = 24/267 (8%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQ-MKGLKVTGSVC 76
           L+G   LVTGG  GLG A+V+     GA V    ++   L E    L+   G  V G   
Sbjct: 3   LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQE----LEAAHGDAVVGVEG 58

Query: 77  DVSS-RPQRQTLINTVSSLFNGKLNIFVNNVG-----TSVLKPTLEYNAEDFSLVMSTNF 130
           DV S    ++ +   V++   GK++  + N G     T+++    +   E F  V   N 
Sbjct: 59  DVRSLDDHKEAVARCVAAF--GKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINV 116

Query: 131 ESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAK 190
           +      + A P L AS  + I  +S+A G      G +Y+A K A+  L K LA E A 
Sbjct: 117 KGYLLAVKAALPALVASRGSVIFTISNA-GFYPNGGGPLYTAAKHAVVGLVKELAFELAP 175

Query: 191 DNIRTNSVAPWYIRTPFTEPL-LGNGK-------FVDEVKSRTPMGRLGEPKEVS-SLVA 241
             +R N VAP  + +    P  LG            D +KS  P+GR+ + +E + + V 
Sbjct: 176 -YVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYTGAYVF 234

Query: 242 FLCMPAASYITGQTVCIDGGFTVNGFF 268
           F         TG  +  DGG  V GFF
Sbjct: 235 FATRGDTVPATGAVLNYDGGMGVRGFF 261

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 87.1 bits (216), Expect = 1e-20
 Identities = 68/245 (27%), Positives = 106/245 (43%), Gaps = 13/245 (5%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
             G   LV GG++G+G A+V      GA V        +  E +        + TG+   
Sbjct: 4   FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERL-------AQETGATAV 56

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
            +    R  +I+ V    +G L+I V N G +V    LE +A+D   +   N  + +H  
Sbjct: 57  QTDSADRDAVIDVVRK--SGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYH-A 113

Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNS 197
            +        G   I++ S     +       Y+A+K A+  +A+ LA ++    I  N 
Sbjct: 114 SVEAARQMPEGGRIIIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDFGPRGITINV 173

Query: 198 VAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVC 257
           V P  I T        NG   D + S   + R G P+EV+ +VA+L  P AS++TG    
Sbjct: 174 VQPGPIDTDANP---ANGPMKDMMHSFMAIKRHGRPEEVAGMVAWLAGPEASFVTGAMHT 230

Query: 258 IDGGF 262
           IDG F
Sbjct: 231 IDGAF 235

Length = 237

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 86.3 bits (214), Expect = 4e-20
 Identities = 59/195 (30%), Positives = 86/195 (44%), Gaps = 13/195 (6%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
              G T L+TGG  G+GLA+ +    LG TV  C R E  L E          ++   VC
Sbjct: 2   KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENP----EIHTEVC 57

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLV----MSTNFES 132
           DV+ R  R+ L+  +   +   LN+ +NN G  + +      AED        ++TN  +
Sbjct: 58  DVADRDSRRELVEWLKKEYP-NLNVLINNAG--IQRNEDLTGAEDLLDDAEQEIATNLLA 114

Query: 133 AFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKD- 191
              L  L  P L     A+I+ +SS L  V      VY ATK A++     L  E  KD 
Sbjct: 115 PIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCATKAAIHSYTLALR-EQLKDT 173

Query: 192 NIRTNSVAPWYIRTP 206
           ++    +AP  + T 
Sbjct: 174 SVEVIELAPPLVDTT 188

Length = 245

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 86.4 bits (214), Expect = 5e-20
 Identities = 74/260 (28%), Positives = 113/260 (43%), Gaps = 21/260 (8%)

Query: 17  SLQGMTALVTGGT--KGLGLAVVEELSMLGATVHTCSRTE--------TELNECIH---H 63
            L+   A+VTG +   G+G A+ +EL+  GA +     T          + +E I     
Sbjct: 3   QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEE 62

Query: 64  LQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFS 123
           L   G+KV+    D++     + L+N V+    G  +I VNN   S         AE+  
Sbjct: 63  LLKNGVKVSSMELDLTQNDAPKELLNKVTEQL-GYPHILVNNAAYSTNNDFSNLTAEELD 121

Query: 124 LVMSTNFESAFHL-CQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAK 182
                N  +   L  Q A    + SG   I+ M+S            Y+ATKGA++ L  
Sbjct: 122 KHYMVNVRATTLLSSQFARGFDKKSGG-RIINMTSGQFQGPMVGELAYAATKGAIDALTS 180

Query: 183 NLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAF 242
           +LA E A   I  N++ P    T +    +  G     +    P GR+GEPK+ + L+ F
Sbjct: 181 SLAAEVAHLGITVNAINPGPTDTGWMTEEIKQG-----LLPMFPFGRIGEPKDAARLIKF 235

Query: 243 LCMPAASYITGQTVCIDGGF 262
           L    A +ITGQ +  +GGF
Sbjct: 236 LASEEAEWITGQIIHSEGGF 255

Length = 256

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 86.0 bits (213), Expect = 5e-20
 Identities = 71/255 (27%), Positives = 117/255 (45%), Gaps = 28/255 (10%)

Query: 23  ALVTGGTKGLGLAVVEELSMLG-ATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
            ++TG ++G+G A     +  G A      R        +  ++ +G +      DV+  
Sbjct: 5   MIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADE 64

Query: 82  PQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTL---EYNAEDFSLVMSTNFESAFHLCQ 138
                L   V     G+L+  VNN G  +L+  +   + +A   + + +TN   +F   +
Sbjct: 65  ADVLRLFEAVDREL-GRLDALVNNAG--ILEAQMRLEQMDAARLTRIFATNVVGSFLCAR 121

Query: 139 LAHPLL--RASGAA-SIVLMSSALGIVSANVGTV-----YSATKGAMNQLAKNLACEWAK 190
            A   +  R  G   +IV +SS    ++A +G+      Y+A+KGA++ +   LA E A 
Sbjct: 122 EAVKRMSTRHGGRGGAIVNVSS----MAARLGSPGEYIDYAASKGAIDTMTIGLAKEVAA 177

Query: 191 DNIRTNSVAPWYIRTPF----TEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP 246
           + IR N+V P  I T       EP    G+ VD VK+  PMGR G  +EV+  + +L   
Sbjct: 178 EGIRVNAVRPGVIYTEIHASGGEP----GR-VDRVKAGIPMGRGGTAEEVARAILWLLSD 232

Query: 247 AASYITGQTVCIDGG 261
            ASY TG  + + GG
Sbjct: 233 EASYTTGTFIDVSGG 247

Length = 248

>gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional

 Score = 85.1 bits (211), Expect = 9e-20
 Identities = 62/242 (25%), Positives = 100/242 (41%), Gaps = 20/242 (8%)

Query: 24  LVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQ 83
           LV GG+ G+GLA+    +  GA V   SR+   L      L      V  +  D++    
Sbjct: 1   LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGA-PVRTAALDITDEAA 59

Query: 84  RQTLINTVSSLFN--GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAH 141
                  V + F   G  +  V     +   P            M + F  A+ + + A 
Sbjct: 60  -------VDAFFAEAGPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAAR 112

Query: 142 PLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPW 201
             +   G  S+  +S    +  +  G +  A   A+  LA+ LA E A   +R N+V+P 
Sbjct: 113 --IAPGG--SLTFVSGFAAVRPSASGVLQGAINAALEALARGLALELAP--VRVNTVSPG 166

Query: 202 YIRTPFTEPLLGNGK--FVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCID 259
            + TP    L G+ +         R P  R+G+P++V++ + FL   A  + TG TV +D
Sbjct: 167 LVDTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLA--ANGFTTGSTVLVD 224

Query: 260 GG 261
           GG
Sbjct: 225 GG 226

Length = 230

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 83.6 bits (207), Expect = 3e-19
 Identities = 53/187 (28%), Positives = 85/187 (45%), Gaps = 3/187 (1%)

Query: 25  VTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQR 84
           +TG + G+G A     +  GA V   +R+   L+E    ++  G +    V DV+   Q 
Sbjct: 5   ITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVRELGGEAIAVVADVADAAQV 64

Query: 85  QTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLL 144
           +   +T    F G+++ +VNN G +V     +   E+F  V   N+    +    A P L
Sbjct: 65  ERAADTAVERF-GRIDTWVNNAGVAVFGRFEDVTPEEFRRVFDVNYLGHVYGTLAALPHL 123

Query: 145 RASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKD--NIRTNSVAPWY 202
           R  G  +++ + S LG  SA +   YSA+K A+    ++L  E A D   I    V P  
Sbjct: 124 RRRGGGALINVGSLLGYRSAPLQAAYSASKHAVRGFTESLRAELAHDGAPISVTLVQPTA 183

Query: 203 IRTPFTE 209
           + TPF  
Sbjct: 184 MNTPFFG 190

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 84.8 bits (210), Expect = 3e-19
 Identities = 75/264 (28%), Positives = 112/264 (42%), Gaps = 26/264 (9%)

Query: 11  SRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATV----HTCSRTETELNECIHHLQM 66
              N   L G  A+VTG   GLG A    L+ LGATV       +   +++ + I     
Sbjct: 3   RTTNTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGA 62

Query: 67  KGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNA--EDFSL 124
           K + V G   D+S R     L+ T   L  G L+I VNN G  + +  + +N   E++  
Sbjct: 63  KAVAVAG---DISQRATADELVATAVGL--GGLDIVVNNAG--ITRDRMLFNMSDEEWDA 115

Query: 125 VMSTNFESAFHLCQLAHPLLRASGAAS-------IVLMSSALGIVSANVGTVYSATKGAM 177
           V++ +    F L + A    RA   A+       IV  SS  G+V       Y A K  +
Sbjct: 116 VIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANYGAAKAGI 175

Query: 178 NQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVS 237
             L  + A    +  +R N++ P   RT  T  + G+   V+      P+     P+ V 
Sbjct: 176 TALTLSAARALGRYGVRANAICP-RARTAMTADVFGDAPDVEA-GGIDPLS----PEHVV 229

Query: 238 SLVAFLCMPAASYITGQTVCIDGG 261
            LV FL  PAA+ + GQ   + G 
Sbjct: 230 PLVQFLASPAAAEVNGQVFIVYGP 253

Length = 306

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 82.4 bits (204), Expect = 1e-18
 Identities = 71/266 (26%), Positives = 110/266 (41%), Gaps = 41/266 (15%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATV----HTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           T LVTGG++GLG A+    +  GA V    H   ++E         L  + + +     D
Sbjct: 7   TVLVTGGSRGLGAAIARAFAREGARVVVNYH---QSEDAAEALADELGDRAIALQA---D 60

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNN--VGTS---VLKPTLE-YNAEDFSLVMSTNFE 131
           V+ R Q Q +  T +  F   +   VNN     S     +   +    EDF   +  + +
Sbjct: 61  VTDREQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVK 120

Query: 132 SAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGT-----------VYSATKGAMNQL 180
            A +  Q A P +R  G   I+           N+GT            Y+  K A+  L
Sbjct: 121 GALNTIQAALPGMREQGFGRII-----------NIGTNLFQNPVVPYHDYTTAKAALLGL 169

Query: 181 AKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFV-DEVKSRTPMGRLGEPKEVSSL 239
            +NLA E     I  N V+   +RT  T+        V D + + TP+ ++  P+E +  
Sbjct: 170 TRNLAAELGPYGITVNMVSGGLLRT--TDASAATPDEVFDLIAATTPLRKVTTPQEFADA 227

Query: 240 VAFLCMPAASYITGQTVCIDGGFTVN 265
           V F   P A  +TGQ + +DGG  +N
Sbjct: 228 VLFFASPWARAVTGQNLVVDGGLVMN 253

Length = 253

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 82.4 bits (204), Expect = 1e-18
 Identities = 62/259 (23%), Positives = 110/259 (42%), Gaps = 26/259 (10%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATV-------HTCSRTETELNECIHHLQMKGLKVTGS 74
            A+V GG + LG  +   L+  G  V          +    E+N      +       G 
Sbjct: 4   VAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINA-----EYGEGMAYGF 58

Query: 75  VCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAF 134
             D +S      L   V  +F G++++ V N G +      ++   DF   +  N    F
Sbjct: 59  GADATSEQSVLALSRGVDEIF-GRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYF 117

Query: 135 HLC--QLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDN 192
            LC  + +  ++R      I+ ++S  G V +   + YSA K     L ++LA + A+  
Sbjct: 118 -LCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEYG 176

Query: 193 IRTNSVAPW-YIRTPFTEPLLGN-----GKFVDEVK----SRTPMGRLGEPKEVSSLVAF 242
           I  +S+     +++P  + LL       G   DEV+     + P+ R  + ++V +++ F
Sbjct: 177 ITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLF 236

Query: 243 LCMPAASYITGQTVCIDGG 261
              P ASY TGQ++ + GG
Sbjct: 237 YASPKASYCTGQSINVTGG 255

Length = 259

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 82.2 bits (203), Expect = 2e-18
 Identities = 77/261 (29%), Positives = 114/261 (43%), Gaps = 26/261 (9%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG-LKVTGSVC 76
           L G  A  T  +KG+G  V   L+  GA V   SR E  L +    ++ +  + V+  V 
Sbjct: 6   LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVA 65

Query: 77  DVSSRPQRQTLINTVSSLFN-GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
           D++   +R+ L  TV  L N G+ +IF  + G       +E + ED+   +      A +
Sbjct: 66  DLT---KREDLERTVKELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVY 122

Query: 136 LCQLAHPLLRASGAASIVLMSSAL------GIVSANVGTVYSATKGAMNQLAKNLACEWA 189
           L +   P +   G   I+  +S         I  +NV  +      +M  L + LA E  
Sbjct: 123 LTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVRI------SMAGLVRTLAKELG 176

Query: 190 KDNIRTNSVAPWYIRTPFTEPLLGN-----GKFVDEVKSR----TPMGRLGEPKEVSSLV 240
              I  N + P  IRT     L  +     GK V+E         P+GRLGEP+E+  LV
Sbjct: 177 PKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGYLV 236

Query: 241 AFLCMPAASYITGQTVCIDGG 261
           AFL     SYI G  + +DGG
Sbjct: 237 AFLASDLGSYINGAMIPVDGG 257

Length = 263

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 81.6 bits (202), Expect = 2e-18
 Identities = 52/193 (26%), Positives = 86/193 (44%), Gaps = 9/193 (4%)

Query: 21  MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETEL----NECIHHLQMKGLKVTGSVC 76
            T L+TG + G+G A     +  GA +    R    L    +E      +K L +     
Sbjct: 1   KTVLITGASSGIGEATARRFAKAGAKLILTGRRAERLQELADELGAKFPVKVLPLQ---L 57

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSV-LKPTLEYNAEDFSLVMSTNFESAFH 135
           DVS R   +  +  +   F   ++I VNN G ++ L P  E + ED+  ++ TN +   +
Sbjct: 58  DVSDRESIEAALENLPEEF-RDIDILVNNAGLALGLDPAQEADLEDWETMIDTNVKGLLN 116

Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRT 195
           + +L  P++ A     I+ + S  G      G VY ATK A+ Q + NL  +     IR 
Sbjct: 117 VTRLILPIMIARNQGHIINLGSIAGRYPYAGGNVYCATKAAVRQFSLNLRKDLIGTGIRV 176

Query: 196 NSVAPWYIRTPFT 208
            ++ P  + T F+
Sbjct: 177 TNIEPGLVETEFS 189

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 84.1 bits (208), Expect = 2e-18
 Identities = 65/270 (24%), Positives = 102/270 (37%), Gaps = 36/270 (13%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATV-------HTCSRTETELNECIHHLQMKGL 69
           +L    A VTGG  G+G      L+  GA V               E+N        + +
Sbjct: 411 TLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEING--QFGAGRAV 468

Query: 70  KVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTN 129
            +     DV+     +     V+  + G ++I VNN G +   P  E   +++ L +   
Sbjct: 469 ALK---MDVTDEQAVKAAFADVALAYGG-VDIVVNNAGIATSSPFEETTLQEWQLNLDIL 524

Query: 130 FESAFHLCQLAHPLLRASG-AASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEW 188
               F + + A   +R  G   +IV ++S   + +    + YSA K A   LA+ LA E 
Sbjct: 525 ATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSAAKAAEAHLARCLAAEG 584

Query: 189 AKDNIRTNSVAP-------------WYIRTPFTEPLLGNGKFVDEV----KSRTPMGRLG 231
               IR N+V P             W       E     G   DE+      RT + R  
Sbjct: 585 GTYGIRVNTVNPDAVLQGSGIWDGEWRE-----ERAAAYGIPADELEEHYAKRTLLKRHI 639

Query: 232 EPKEVSSLVAFLCMPAASYITGQTVCIDGG 261
            P +++  V FL    +   TG  + +DGG
Sbjct: 640 FPADIAEAVFFLASSKSEKTTGCIITVDGG 669

Length = 676

>gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 81.7 bits (202), Expect = 2e-18
 Identities = 68/261 (26%), Positives = 123/261 (47%), Gaps = 23/261 (8%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATV-HTCSRTETELNECIHHLQMK-GLKVTGSV 75
           ++G T +++GGT+G+G A+V E +  G  +  T +    E N+    L+ K G+K     
Sbjct: 6   MKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYP 65

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNV---GTSV---------LKPTLEYNAEDFS 123
            ++      + L   +   F+ +++ F++N    G +V         LKP    N     
Sbjct: 66  LNILEPETYKELFKKIDEDFD-RVDFFISNAIISGRAVVGGYTKFMRLKPKGLNN----- 119

Query: 124 LVMSTNFESAFHL-CQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAK 182
             + T   +AF +  Q A   +   G  SI+ +SS   +V       +  +K A+  + K
Sbjct: 120 --IYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENYAGHGTSKAAVETMVK 177

Query: 183 NLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAF 242
             A E  + NIR N+V+   I T   +      +   + +  +P+ R+G+P++++    F
Sbjct: 178 YAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPLNRMGQPEDLAGACLF 237

Query: 243 LCMPAASYITGQTVCIDGGFT 263
           LC   AS++TGQT+ +DGG T
Sbjct: 238 LCSEKASWLTGQTIVVDGGTT 258

Length = 260

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score = 82.2 bits (203), Expect = 2e-18
 Identities = 75/285 (26%), Positives = 110/285 (38%), Gaps = 37/285 (12%)

Query: 1   MAQPQQTESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATV-----------HT 49
           MA    + S     R  L G  ALVTGG  G+G ++V      GA V           + 
Sbjct: 1   MATASSSASSLPSQR--LLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNV 58

Query: 50  CSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTS 109
           C     E N C  H            CDV+        ++     F G L+I VNN G +
Sbjct: 59  CDSLGGEPNVCFFH------------CDVTVEDDVSRAVDFTVDKF-GTLDIMVNNAGLT 105

Query: 110 VLKPTLEYNAE--DFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG 167
                   N E  +F  V   N +  F   + A  ++      SIV + S    +     
Sbjct: 106 GPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGP 165

Query: 168 TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEV------ 221
             Y+ +K A+  L +++A E  K  IR N V+P+ + T      L   +  ++       
Sbjct: 166 HAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRA 225

Query: 222 ---KSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFT 263
              K+    G      +V++ V FL    A YI+G  + IDGGFT
Sbjct: 226 FAGKNANLKGVELTVDDVANAVLFLASDEARYISGLNLMIDGGFT 270

Length = 280

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 81.6 bits (202), Expect = 3e-18
 Identities = 54/187 (28%), Positives = 85/187 (45%), Gaps = 3/187 (1%)

Query: 20  GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVS 79
           G   ++TG ++G+G A+   L+  GA +   +R ET L      L   G +      DVS
Sbjct: 1   GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVS 60

Query: 80  SRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNA-EDFSLVMSTNFESAFHLCQ 138
                + LI    + F G ++I VNN G ++     E      F  VM  N+  A +   
Sbjct: 61  DAEACERLIEAAVARF-GGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTH 119

Query: 139 LAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSV 198
            A P L+AS    IV++SS  G+      + Y+A+K A++    +L  E A D +    V
Sbjct: 120 AALPHLKASRGQ-IVVVSSLAGLTGVPTRSGYAASKHALHGFFDSLRIELADDGVAVTVV 178

Query: 199 APWYIRT 205
            P ++ T
Sbjct: 179 CPGFVAT 185

Length = 263

>gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR

 Score = 80.7 bits (200), Expect = 5e-18
 Identities = 64/257 (24%), Positives = 110/257 (42%), Gaps = 17/257 (6%)

Query: 20  GMTALVTG--GTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           G   L+TG    + +   + + L   GA +    + E          +  G       CD
Sbjct: 1   GKRILITGIANDRSIAWGIAKALHEAGAELAFTYQPEALRKRVEKLAERLGESALVLPCD 60

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVG----TSVLKPTLEYNAEDFSLVMSTNFESA 133
           VS+  + + L   V   + GKL+  V+++       +  P L+ + + F   +     SA
Sbjct: 61  VSNDEEIKELFAEVKKDW-GKLDGLVHSIAFAPKVQLKGPFLDTSRKGFLKALDI---SA 116

Query: 134 FHLCQLAH---PLLRASGAASIVLMS-SALGIVSANVGTVYSATKGAMNQLAKNLACEWA 189
           + L  LA    P++   G  SIV +S      V      +  A K A+    + LA E  
Sbjct: 117 YSLVSLAKAALPIMNPGG--SIVTLSYLGSERVVPGYNVMGVA-KAALESSVRYLAYELG 173

Query: 190 KDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAAS 249
           +  IR N+++   I+T     + G  K ++  + R P+GR    +EV +  AFL    +S
Sbjct: 174 RKGIRVNAISAGPIKTLAASGITGFDKMLEYSEQRAPLGRNVTAEEVGNTAAFLLSDLSS 233

Query: 250 YITGQTVCIDGGFTVNG 266
            ITG+ + +DGG+ + G
Sbjct: 234 GITGEIIYVDGGYHIMG 250

This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 80.2 bits (198), Expect = 9e-18
 Identities = 53/196 (27%), Positives = 88/196 (44%), Gaps = 9/196 (4%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTET-ELNECIHHLQMKGLKVTGSVC 76
           L G  ALVTG ++G+G  +  +L   GATV+   RT   +L      ++ +G K     C
Sbjct: 1   LSGKIALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIEARGGKCIPVRC 60

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNV-------GTSVLKPTLEYNAEDFSLVMSTN 129
           D S   + + L   V+    G+L+I VNN           V KP  E     +  + +  
Sbjct: 61  DHSDDDEVEALFERVAREQQGRLDILVNNAYAAVQLILVGVAKPFWEEPPTIWDDINNVG 120

Query: 130 FESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWA 189
             + +     A PL+  +G   IV++SS  G +       Y   K A++++A ++A E  
Sbjct: 121 LRAHYACSVYAAPLMVKAGKGLIVIISS-TGGLEYLFNVAYGVGKAAIDRMAADMAHELK 179

Query: 190 KDNIRTNSVAPWYIRT 205
              +   S+ P ++RT
Sbjct: 180 PHGVAVVSLWPGFVRT 195

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 79.3 bits (196), Expect = 2e-17
 Identities = 69/267 (25%), Positives = 114/267 (42%), Gaps = 30/267 (11%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQM--KGLKVTGS 74
            L+G T L+TG    +G A+V+ +   G  V      +  LNE +  L    K  K++  
Sbjct: 1   MLKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLV 60

Query: 75  VCDVSSRPQRQTLINTVSSLFNGKLNIFVNNV-------GTSVLKPTLEYNAEDFSLVMS 127
             D++ +   +  ++  +  + GK++  VN         G      +L+    DF+  +S
Sbjct: 61  ELDITDQESLEEFLSKSAEKY-GKIDGAVNCAYPRNKDYGKKFFDVSLD----DFNENLS 115

Query: 128 TNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANV----GTV------YSATKGAM 177
            +  S+F   Q      +  G  ++V +SS  G+V+       GT       Y+A K  +
Sbjct: 116 LHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTSMTSPVEYAAIKAGI 175

Query: 178 NQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVS 237
             L K LA  +   NIR N V+P  I     E  L   K     K     G L +P ++ 
Sbjct: 176 IHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEAFLNAYK-----KCCNGKGML-DPDDIC 229

Query: 238 SLVAFLCMPAASYITGQTVCIDGGFTV 264
             + FL    + YITGQ + +D GF++
Sbjct: 230 GTLVFLLSDQSKYITGQNIIVDDGFSL 256

Length = 256

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 76.0 bits (187), Expect = 2e-16
 Identities = 62/249 (24%), Positives = 107/249 (42%), Gaps = 22/249 (8%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L+G    + G ++GLG AV       GA V   SR E +L      L   G  +   V D
Sbjct: 3   LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYG-NIHYVVGD 61

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           VSS    + +I   + + N  ++  V  VG  V     E++  +  L  + + +   +  
Sbjct: 62  VSSTESARNVIEKAAKVLNA-IDGLVVTVGGYVEDTVEEFSGLEEML--TNHIKIPLYAV 118

Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEWAKDNIRTN 196
             +   L+    +SIVL+SS  GI  A+   + Y+  K  + +  + LA E     IR N
Sbjct: 119 NASLRFLKE--GSSIVLVSSMSGIYKASPDQLSYAVAKAGLAKAVEILASELLGRGIRVN 176

Query: 197 SVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPK----EVSSLVAFLCMPAASYIT 252
            +AP  I          +G F  E ++   + +LG+      + + ++ +L    A ++ 
Sbjct: 177 GIAPTTI----------SGDFEPE-RNWKKLRKLGDDMAPPEDFAKVIIWLLTDEADWVD 225

Query: 253 GQTVCIDGG 261
           G  + +DGG
Sbjct: 226 GVVIPVDGG 234

Length = 238

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 75.6 bits (186), Expect = 2e-16
 Identities = 49/216 (22%), Positives = 82/216 (37%), Gaps = 8/216 (3%)

Query: 25  VTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQR 84
           +TG   G+G       +  G  V      E  L       ++    V     DV+ R   
Sbjct: 5   ITGAASGIGRETALLFARNGWFVGLYDIDEDGLAAL--AAELGAENVVAGALDVTDRAAW 62

Query: 85  QTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLL 144
              +   ++   G+L+   NN G     P  +        ++  N +   +    A P L
Sbjct: 63  AAALADFAAATGGRLDALFNNAGVGRGGPFEDVPLAAHDRMVDINVKGVLNGAYAALPYL 122

Query: 145 RASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIR 204
           +A+  A ++  +S+  I       VYSATK A+  L + L  EWA+  IR   V PW++ 
Sbjct: 123 KATPGARVINTASSSAIYGQPDLAVYSATKFAVRGLTEALDVEWARHGIRVADVWPWFVD 182

Query: 205 TPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLV 240
           TP                 +  +GR+    +V+ +V
Sbjct: 183 TPILTK------GETGAAPKKGLGRVLPVSDVAKVV 212

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 75.7 bits (187), Expect = 2e-16
 Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 5/190 (2%)

Query: 23  ALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK-GLKVTGSVCDVSSR 81
           A+VTG T G+G A  EEL+  G  V   SRT+ +L+     ++ K G++      D S+ 
Sbjct: 4   AVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKYGVETKTIAADFSAG 63

Query: 82  PQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSL--VMSTNFESAFHLCQL 139
                 I     L    + I VNNVG S   P       +  L  +++ N  +   + +L
Sbjct: 64  DDIYERIEK--ELEGLDIGILVNNVGISHSIPEYFLETPEDELQDIINVNVMATLKMTRL 121

Query: 140 AHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVA 199
             P +      +IV +SS  G++   +   YSA+K  ++  ++ L  E+    I   S+ 
Sbjct: 122 ILPGMVKRKKGAIVNISSFAGLIPTPLLATYSASKAFLDFFSRALYEEYKSQGIDVQSLL 181

Query: 200 PWYIRTPFTE 209
           P+ + T  ++
Sbjct: 182 PYLVATKMSK 191

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 75.3 bits (185), Expect = 3e-16
 Identities = 63/250 (25%), Positives = 97/250 (38%), Gaps = 31/250 (12%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG--------- 68
           L     LVTG + G+G       +  GATV    R E +L +   H+  +G         
Sbjct: 2   LNDRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFIL 61

Query: 69  --LKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVG-TSVLKPTLEYNAEDFSLV 125
             L  T   C        Q L   ++  +  +L+  ++N G    + P  E N + +  V
Sbjct: 62  DLLTCTSENC--------QQLAQRIAVNY-PRLDGVLHNAGLLGDVCPLSEQNPQVWQDV 112

Query: 126 MSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLA 185
              N  + F L Q   PLL  S A S+V  SS++G         Y+ +K A   L + LA
Sbjct: 113 XQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAVSKFATEGLXQVLA 172

Query: 186 CEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCM 245
            E+ + N+R N + P   RT      +    F  E   +        P ++  L  +L  
Sbjct: 173 DEYQQRNLRVNCINPGGTRTA-----MRASAFPTEDPQKLK-----TPADIMPLYLWLMG 222

Query: 246 PAASYITGQT 255
             +   TG T
Sbjct: 223 DDSRRKTGMT 232

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 75.7 bits (187), Expect = 3e-16
 Identities = 48/193 (24%), Positives = 72/193 (37%), Gaps = 22/193 (11%)

Query: 24  LVTGGTKGLGLAVVEELSMLGATV-------HTCSRTETEL---NECIHHLQMKGLKVTG 73
            +TG   G+G A     +  G  V          +    EL   N     L         
Sbjct: 5   FITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGAL--------- 55

Query: 74  SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESA 133
              DV+ R      +   ++   G+L++  NN G     P  +   E    V+  N +  
Sbjct: 56  ---DVTDRAAWDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGV 112

Query: 134 FHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNI 193
            +    A P L+A+  A ++  SSA  I       VYSATK A+  L + L  EW +  I
Sbjct: 113 LNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRGLTEALDLEWRRHGI 172

Query: 194 RTNSVAPWYIRTP 206
           R   V P ++ T 
Sbjct: 173 RVADVMPLFVDTA 185

Length = 260

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 74.9 bits (184), Expect = 6e-16
 Identities = 61/236 (25%), Positives = 102/236 (43%), Gaps = 18/236 (7%)

Query: 15  RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG-LKVTG 73
           RW   G  ALVTG + G+G AV   L   G  V  C+R   ++       Q  G   +  
Sbjct: 3   RWR--GRVALVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQSAGYPTLFP 60

Query: 74  SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESA 133
             CD+S+  Q  ++ + + +   G +++ +NN G +  +P L    E +  +   N   A
Sbjct: 61  YQCDLSNEEQILSMFSAIRTQHQG-VDVCINNAGLARPEPLLSGKTEGWKEMFDVNV-LA 118

Query: 134 FHLC---QLAHPLLRASGAASIVLMSSALG--IVSANVGTVYSATKGAMNQLAKNLACE- 187
             +C          R      I+ ++S  G  +   +V   Y+ATK A+  L + L  E 
Sbjct: 119 LSICTREAYQSMKERNVDDGHIININSMSGHRVPPVSVFHFYAATKHAVTALTEGLRQEL 178

Query: 188 -WAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLG--EPKEVSSLV 240
             AK +IR  S++P  + T F   L  N    D  K+      +   +P++V++ V
Sbjct: 179 REAKTHIRATSISPGLVETEFAFKLHDN----DPEKAAATYESIPCLKPEDVANAV 230

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 74.7 bits (183), Expect = 7e-16
 Identities = 60/241 (24%), Positives = 108/241 (44%), Gaps = 4/241 (1%)

Query: 23  ALVTGGTKGLGLAVVEELSMLGATVHT-CSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
           A VTGG  G+G ++ + L   G  V   C        + +   +  G     S  +V   
Sbjct: 6   AYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDW 65

Query: 82  PQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAH 141
              +   + V +   G++++ VNN G +      +   ED++ V+ TN  S F++ +   
Sbjct: 66  DSTKAAFDKVKAEV-GEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVI 124

Query: 142 PLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPW 201
             +   G   I+ +SS  G       T YS  K  ++    +LA E A   +  N+V+P 
Sbjct: 125 DGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPG 184

Query: 202 YIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGG 261
           YI T   + +  +   ++++ +  P+ RLG P E+ S+VA+L    + + TG    ++GG
Sbjct: 185 YIGTDMVKAIRPD--VLEKIVATIPVRRLGSPDEIGSIVAWLASEESGFSTGADFSLNGG 242

Query: 262 F 262
            
Sbjct: 243 L 243

Length = 246

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 74.2 bits (183), Expect = 9e-16
 Identities = 45/183 (24%), Positives = 81/183 (44%), Gaps = 8/183 (4%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGAT--VHTCSRTETELNECIHHLQMKGLKVTGSVCDVS 79
             ++TG ++G+G A+ EEL   G+   V   +R+E  L E    L+  GL+VT    D+S
Sbjct: 1   VIILTGASRGIGRALAEELLKRGSPSVVVLLARSEEPLQELKEELR-PGLRVTTVKADLS 59

Query: 80  SRPQRQTLINTVSSLFNGKLNIFVNNVGTSV-LKPTLEYNAEDFSLVMSTNFESAFHLCQ 138
                + L+  +  L +G+ ++ +NN G+   +      + ++       N  S   L  
Sbjct: 60  DAAGVEQLLEAIRKL-DGERDLLINNAGSLGPVSKIEFIDLDELQKYFDLNLTSPVCLTS 118

Query: 139 LAHPLLRASGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEWAKDNIRTNS 197
                 +  G    V+  S+   V+   G   Y ++K A +   + LA E  + ++R  S
Sbjct: 119 TLLRAFKKRGLKKTVVNVSSGAAVNPFKGWGLYCSSKAARDMFFRVLAAE--EPDVRVLS 176

Query: 198 VAP 200
            AP
Sbjct: 177 YAP 179

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 75.6 bits (187), Expect = 1e-15
 Identities = 72/249 (28%), Positives = 108/249 (43%), Gaps = 26/249 (10%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTC---SRTETELNECIHHLQMKGLKVTGS 74
           L G  ALVTG  +G+G A+ E L+  GA V  C         L           +  T  
Sbjct: 208 LAGKVALVTGAARGIGAAIAEVLARDGAHV-VCLDVPAAGEALAAV-----ANRVGGTAL 261

Query: 75  VCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDF-SLVMSTNFESA 133
             D+++      +   ++    G L+I V+N G +  K TL    E     V++ N  + 
Sbjct: 262 ALDITAPDAPARIAEHLAERH-GGLDIVVHNAGITRDK-TLANMDEARWDSVLAVNLLAP 319

Query: 134 FHLCQ--LAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAK 190
             + +  LA   L   G   IV +SS  GI + N G T Y+A+K  +  L + LA   A+
Sbjct: 320 LRITEALLAAGALGDGG--RIVGVSSISGI-AGNRGQTNYAASKAGVIGLVQALAPLLAE 376

Query: 191 DNIRTNSVAPWYIRTPFTE--PLLGNGKFVDEVKSR-TPMGRLGEPKEVSSLVAFLCMPA 247
             I  N+VAP +I T  T   P         E   R   + + G P +V+  +A+L  PA
Sbjct: 377 RGITINAVAPGFIETQMTAAIPFA-----TREAGRRMNSLQQGGLPVDVAETIAWLASPA 431

Query: 248 ASYITGQTV 256
           +  +TG  V
Sbjct: 432 SGGVTGNVV 440

Length = 450

>gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional

 Score = 74.3 bits (182), Expect = 2e-15
 Identities = 71/250 (28%), Positives = 111/250 (44%), Gaps = 12/250 (4%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATV--HTCSRTETELNECIHHLQMKGLKVTGSV 75
           L+   ALVTGG  G+G A     +  GA V        E +  +    ++  G K     
Sbjct: 47  LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLP 106

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTL-EYNAEDFSLVMSTNFESAF 134
            D+S     ++L++       G L+I     G  V  P + +  +E F    + N  + F
Sbjct: 107 GDLSDEKFARSLVHEAHKALGG-LDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALF 165

Query: 135 HLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIR 194
            L Q A PLL     ASI+  SS      +     Y+ATK A+   ++ LA + A+  IR
Sbjct: 166 WLTQEAIPLLPK--GASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIR 223

Query: 195 TNSVAPWYIRTPFTEPLLGNGKFVDEVKS---RTPMGRLGEPKEVSSLVAFLCMPAASYI 251
            N VAP  I T      +  G+  D++     +TPM R G+P E++ +  +L    +SY+
Sbjct: 224 VNIVAPGPIWTALQ---ISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYV 280

Query: 252 TGQTVCIDGG 261
           T +   + GG
Sbjct: 281 TAEVHGVCGG 290

Length = 294

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 73.4 bits (181), Expect = 3e-15
 Identities = 51/186 (27%), Positives = 84/186 (45%), Gaps = 9/186 (4%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
            ALVTG + G+G A  E+L+  G  V   SR             + G  V     DV+  
Sbjct: 6   VALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAA------PIPG--VELLELDVTDD 57

Query: 82  PQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAH 141
              Q  ++ V +   G++++ VNN G  +     E +      +  TN      + +   
Sbjct: 58  ASVQAAVDEVIARA-GRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVL 116

Query: 142 PLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPW 201
           P +RA G+  I+ +SS LG + A    +Y+A+K A+   +++L  E  +  IR + V P 
Sbjct: 117 PHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPA 176

Query: 202 YIRTPF 207
           Y +T F
Sbjct: 177 YTKTNF 182

Length = 270

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 71.8 bits (176), Expect = 7e-15
 Identities = 72/249 (28%), Positives = 112/249 (44%), Gaps = 14/249 (5%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATVH-TCSRTETELNECIHHLQMKGLKVTGSVCDVSS 80
             L+TG ++G+G A     +  G +V    +R      E    ++  G +      DV++
Sbjct: 4   VVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVAN 63

Query: 81  RPQRQTLINTVSSLFNGKLNIFVNNVG-TSVLKPTLEYNAEDFSLVMSTNFESAFHLC-- 137
                 + + V S F G+L+  VNN G  +   P  + +A     +  TN   A+ LC  
Sbjct: 64  EADVIAMFDAVQSAF-GRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAY-LCAR 121

Query: 138 QLAHPLLRASGAA--SIVLMSSA---LGIVSANVGTVYSATKGAMNQLAKNLACEWAKDN 192
           + A  L    G    +IV +SS    LG  S N    Y+ +KGA++ L   LA E     
Sbjct: 122 EAARRLSTDRGGRGGAIVNVSSIASRLG--SPNEYVDYAGSKGAVDTLTLGLAKELGPHG 179

Query: 193 IRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT 252
           +R N+V P  I T       G       + ++TP+GR GE  EV+  + +L   AASY+T
Sbjct: 180 VRVNAVRPGLIETEI-HASGGQPGRAARLGAQTPLGRAGEADEVAETIVWLLSDAASYVT 238

Query: 253 GQTVCIDGG 261
           G  + + GG
Sbjct: 239 GALLDVGGG 247

Length = 248

>gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein]

 Score = 71.5 bits (176), Expect = 1e-14
 Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 21/204 (10%)

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVG----TSVLKPTLEYNAEDFSLVMSTNFE 131
           CDV++      L  T+   + GKL+  V+++       +    L+ + E F + M     
Sbjct: 63  CDVTNDESIDALFATIKKKW-GKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDI--- 118

Query: 132 SAFHLCQLAH---PLLRASGAASIVLMSSALGIVSA----NVGTVYSATKGAMNQLAKNL 184
           SA+    LA    PL+   G  SI+ ++  LG        NV  V    K A+    + L
Sbjct: 119 SAYSFTALAKAARPLMNNGG--SILTLTY-LGSERVVPNYNVMGV---AKAALEASVRYL 172

Query: 185 ACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLC 244
           A +  K+ IR N+++   IRT     +    K + E ++  P+ R    +EV +  AFL 
Sbjct: 173 AADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPLRRNVTIEEVGNTAAFLL 232

Query: 245 MPAASYITGQTVCIDGGFTVNGFF 268
              +S ITG+ + +D G+ + G  
Sbjct: 233 SDLSSGITGEIIYVDSGYHIMGMG 256

Length = 259

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 71.5 bits (175), Expect = 1e-14
 Identities = 54/188 (28%), Positives = 88/188 (46%), Gaps = 4/188 (2%)

Query: 20  GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVS 79
           G  A++TGG  G+GLA   E +  GA V      +  L + ++HL+ +G  V G +CDV 
Sbjct: 6   GRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVR 65

Query: 80  SRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQL 139
            R +   L +    L  G +++  +N G  V  P +E   +D+  V+  +   + H  + 
Sbjct: 66  HREEVTHLADEAFRLL-GHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEA 124

Query: 140 AHP-LLRASGAASIVLMSSALGIV-SANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNS 197
             P LL       +V  +S  G+V +A +G  Y   K  +  LA+ LA E   D I  + 
Sbjct: 125 FLPRLLEQGTGGHVVFTASFAGLVPNAGLGA-YGVAKYGVVGLAETLAREVTADGIGVSV 183

Query: 198 VAPWYIRT 205
           + P  + T
Sbjct: 184 LCPMVVET 191

Length = 275

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 72.3 bits (178), Expect = 1e-14
 Identities = 45/188 (23%), Positives = 73/188 (38%), Gaps = 3/188 (1%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
             ++TG + G+G A     +  GA V   +R E  L      ++  G +    V DV+  
Sbjct: 10  VVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADA 69

Query: 82  PQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAH 141
              Q   +       G ++ +VNN   +V  P  +   E+F  V    +    H    A 
Sbjct: 70  EAVQAAADRAEEEL-GPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAAL 128

Query: 142 PLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKD--NIRTNSVA 199
             +R     +I+ + SAL   S  + + Y A K A+     +L CE   D   +    V 
Sbjct: 129 RHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQ 188

Query: 200 PWYIRTPF 207
           P  + TP 
Sbjct: 189 PPAVNTPQ 196

Length = 334

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score = 71.0 bits (174), Expect = 2e-14
 Identities = 60/256 (23%), Positives = 108/256 (42%), Gaps = 15/256 (5%)

Query: 19  QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK-GLKVTGSVCD 77
               A+V GG + LG  +   L+  G  V           +    +  + G K  G   D
Sbjct: 1   MNQVAVVIGGGQTLGEFLCHGLAEAGYDVAVADINSENAEKVADEINAEYGEKAYGFGAD 60

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
            ++      L   V  +F  ++++ V + G +      ++   DF   +  N    F LC
Sbjct: 61  ATNEQSVIALSKGVDEIFK-RVDLLVYSAGIAKSAKITDFELGDFDRSLQVNLVGYF-LC 118

Query: 138 --QLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRT 195
             + +  ++R      I+ ++S  G V +   + YSA K     L ++LA + A+  I  
Sbjct: 119 AREFSKLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEHGITV 178

Query: 196 NSVAPW-YIRTPFTEPLLGN-----GKFVDEVK----SRTPMGRLGEPKEVSSLVAFLCM 245
           NS+     +++P  + LL       G    EV+     + P+ R  + ++V +++ F   
Sbjct: 179 NSLMLGNLLKSPMFQSLLPQYAKKLGIKESEVEQYYIDKVPLKRGCDYQDVLNMLLFYAS 238

Query: 246 PAASYITGQTVCIDGG 261
           P ASY TGQ++ I GG
Sbjct: 239 PKASYCTGQSINITGG 254

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 70.8 bits (174), Expect = 2e-14
 Identities = 68/256 (26%), Positives = 112/256 (43%), Gaps = 28/256 (10%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATV---------HTCSRTETELNECIHHLQMK 67
              G   LVTG   GLG A     +  GA V             ++ +  ++ +  ++  
Sbjct: 2   RFDGRVVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVVDEIKAA 61

Query: 68  GLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMS 127
           G K   +V +  S    + ++ T    F G+++I VNN G    +   + + ED+ LVM 
Sbjct: 62  GGK---AVANYDSVEDGEKIVKTAIDAF-GRVDILVNNAGILRDRSFAKMSEEDWDLVMR 117

Query: 128 TNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLAC 186
            + + +F + + A P +R      I+  SSA G+   N G   YSA K  +  L+  LA 
Sbjct: 118 VHLKGSFKVTRAAWPYMRKQKFGRIINTSSAAGLY-GNFGQANYSAAKLGLLGLSNTLAI 176

Query: 187 EWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP 246
           E AK NI  N++AP    +  TE ++      D +K          P+ V+ LV +LC  
Sbjct: 177 EGAKYNITCNTIAP-AAGSRMTETVMPE-DLFDALK----------PEYVAPLVLYLC-H 223

Query: 247 AASYITGQTVCIDGGF 262
            +  +TG    +  G+
Sbjct: 224 ESCEVTGGLFEVGAGW 239

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|180766 PRK06940, PRK06940, short chain dehydrogenase; Provisional

 Score = 70.8 bits (174), Expect = 2e-14
 Identities = 73/267 (27%), Positives = 103/267 (38%), Gaps = 34/267 (12%)

Query: 24  LVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQ 83
           +V  G  G+G A+   +   G  V      E  L      L+  G  V+    DVSSR  
Sbjct: 5   VVVIGAGGIGQAIARRVGA-GKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRES 63

Query: 84  RQTLINTVSSLFNGKLNIFVNNVGTS--------VLKPTLEYNA---EDFSLVMSTN--- 129
            + L  T  +L  G +   V+  G S        +LK  L   A   E+F  V++     
Sbjct: 64  VKALAATAQTL--GPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAG 121

Query: 130 ----FESAFHLCQLAHPLLRASGAASI-VLMSSALGIVSA--NVGTVYSATKGAMNQL-A 181
                +S   L  L     RA        L+S       A  +    Y   K A N L  
Sbjct: 122 VVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPDAIEDSLHAYQIAKRA-NALRV 180

Query: 182 KNLACEWAKDNIRTNSVAPWYIRTP-----FTEPLLGNGKFVDEVKSRTPMGRLGEPKEV 236
              A +W +   R NS++P  I TP        P    G     + +++P GR G P E+
Sbjct: 181 MAEAVKWGERGARINSISPGIISTPLAQDELNGP---RGDGYRNMFAKSPAGRPGTPDEI 237

Query: 237 SSLVAFLCMPAASYITGQTVCIDGGFT 263
           ++L  FL  P  S+ITG    +DGG T
Sbjct: 238 AALAEFLMGPRGSFITGSDFLVDGGAT 264

Length = 275

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 69.9 bits (172), Expect = 3e-14
 Identities = 55/197 (27%), Positives = 80/197 (40%), Gaps = 20/197 (10%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGAT-VHTCSR---TETELNECIHHLQMKGLKVT 72
            ++G   LVTG  +G+G A VE+L   GA  V+  +R   + T+L   +  LQ+      
Sbjct: 3   DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTDLGPRVVPLQL------ 56

Query: 73  GSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGT-SVLKPTLEYNAEDFSLVMSTNFE 131
               DV+            S +      I VNN G        LE + +     M TN+ 
Sbjct: 57  ----DVTDPASVAAAAEAASDV-----TILVNNAGIFRTGSLLLEGDEDALRAEMETNYF 107

Query: 132 SAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKD 191
               + +   P+L A+G  +IV + S L  V+      YSA+K A   L + L  E A  
Sbjct: 108 GPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKAAAWSLTQALRAELAPQ 167

Query: 192 NIRTNSVAPWYIRTPFT 208
             R   V P  I T   
Sbjct: 168 GTRVLGVHPGPIDTDMA 184

Length = 238

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 69.0 bits (169), Expect = 6e-14
 Identities = 57/198 (28%), Positives = 80/198 (40%), Gaps = 18/198 (9%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGAT-VHTCSRTETELNECIHHLQMK-GLKVTGSV 75
           ++  T LVTG  +G+G A VE L   GA  V+   R          HL  K G KV    
Sbjct: 1   IKDKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDP----GSAAHLVAKYGDKVVPLR 56

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLV---MSTNFES 132
            DV+     +        +     ++ +NN G  VLKP           +   M  N   
Sbjct: 57  LDVTDPESIKAAAAQAKDV-----DVVINNAG--VLKPATLLEEGALEALKQEMDVNVFG 109

Query: 133 AFHLCQLAHPLLRASGAASIVLMSSALGIVS-ANVGTVYSATKGAMNQLAKNLACEWAKD 191
              L Q   P+L+A+G  +IV ++S   + +   +GT YSA+K A   L + L  E A  
Sbjct: 110 LLRLAQAFAPVLKANGGGAIVNLNSVASLKNFPAMGT-YSASKSAAYSLTQGLRAELAAQ 168

Query: 192 NIRTNSVAPWYIRTPFTE 209
                SV P  I T    
Sbjct: 169 GTLVLSVHPGPIDTRMAA 186

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 68.7 bits (168), Expect = 1e-13
 Identities = 68/260 (26%), Positives = 103/260 (39%), Gaps = 23/260 (8%)

Query: 21  MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSS 80
           M  LVT  ++G+G  V  EL   GA V   SR E  L + +  L+  G +V     D+S 
Sbjct: 1   MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYG-EVYAVKADLSD 59

Query: 81  RPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQ-- 138
           +   + L+     L  G ++  V N G    +P + + A     + +    +  HL    
Sbjct: 60  KDDLKNLVKEAWELL-GGIDALVWNAGNVRCEPCMLHEAGYSDWLEA----ALLHLVAPG 114

Query: 139 -----LAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNI 193
                L    L       +V +SS           +   T+  + QLAK ++  +    I
Sbjct: 115 YLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGLVQLAKGVSRTYGGKGI 174

Query: 194 RTNSVAPWYIRTPFTEPLLGN-----GKFVDE-----VKSRTPMGRLGEPKEVSSLVAFL 243
           R  +V      TP     L       G   +E     V  RTP+ R G  +E+ SL+AFL
Sbjct: 175 RAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEELGSLIAFL 234

Query: 244 CMPAASYITGQTVCIDGGFT 263
               A Y+ G T+  DG  T
Sbjct: 235 LSENAEYMLGSTIVFDGAMT 254

Length = 259

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score = 68.8 bits (168), Expect = 1e-13
 Identities = 74/259 (28%), Positives = 116/259 (44%), Gaps = 35/259 (13%)

Query: 20  GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSV---- 75
           G  ALVTG  +G+GL +   L   G  V        +L+      + +G KV  ++    
Sbjct: 10  GRVALVTGAARGIGLGIAAWLIAEGWQV-----VLADLD------RERGSKVAKALGENA 58

Query: 76  ----CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTS-VLKPTLE-YNAEDFSLVMSTN 129
                DV+   Q    +  V   F G+L+  V N   +     TLE  +   ++ V++ N
Sbjct: 59  WFIAMDVADEAQVAAGVAEVLGQF-GRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVN 117

Query: 130 FESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWA 189
                 L +   P LRA   A IV ++S     S      Y+A+KG +  L   LA    
Sbjct: 118 LTGPMLLAKHCAPYLRAHNGA-IVNLASTRARQSEPDTEAYAASKGGLLALTHALAISLG 176

Query: 190 KDNIRTNSVAPWYI--RTPF---TEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLC 244
            + IR N+V+P +I  R P     EPL       +   ++ P GR+G  ++V+++VA+L 
Sbjct: 177 PE-IRVNAVSPGWIDARDPSQRRAEPL------SEADHAQHPAGRVGTVEDVAAMVAWLL 229

Query: 245 MPAASYITGQTVCIDGGFT 263
              A ++TGQ   +DGG T
Sbjct: 230 SRQAGFVTGQEFVVDGGMT 248

Length = 255

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 68.4 bits (168), Expect = 1e-13
 Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 3/190 (1%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L+    L+TG + G+G A+ E L+  GA +    R   +L      L   G +    V D
Sbjct: 3   LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPG-RHRWVVAD 61

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           ++S   R+ ++        G +N+ +NN G +      + + E    +++ N  +   L 
Sbjct: 62  LTSEAGREAVLARARE--MGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLT 119

Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNS 197
           +   PLLRA  +A +V + S  G +       Y A+K A+   ++ L  E A   +R   
Sbjct: 120 RALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKFALRGFSEALRRELADTGVRVLY 179

Query: 198 VAPWYIRTPF 207
           +AP   RT  
Sbjct: 180 LAPRATRTAM 189

Length = 263

>gnl|CDD|180949 PRK07370, PRK07370, enoyl-(acyl carrier protein) reductase; Validated

 Score = 68.2 bits (167), Expect = 1e-13
 Identities = 62/201 (30%), Positives = 93/201 (46%), Gaps = 17/201 (8%)

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYN-----AEDFSLVMSTNF 130
           CDV    Q +    T+   + GKL+I V+ +  +  K  L  +      E F+  +  + 
Sbjct: 66  CDVQDDAQIEETFETIKQKW-GKLDILVHCLAFAG-KEELIGDFSATSREGFARALEISA 123

Query: 131 ESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA----NVGTVYSATKGAMNQLAKNLAC 186
            S   LC+ A PL+   G  SIV ++  LG V A    NV  V    K A+    + LA 
Sbjct: 124 YSLAPLCKAAKPLMSEGG--SIVTLTY-LGGVRAIPNYNVMGV---AKAALEASVRYLAA 177

Query: 187 EWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP 246
           E    NIR N+++   IRT  +  + G    +  V+ + P+ R     EV +  AFL   
Sbjct: 178 ELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAPLRRTVTQTEVGNTAAFLLSD 237

Query: 247 AASYITGQTVCIDGGFTVNGF 267
            AS ITGQT+ +D G+ + G 
Sbjct: 238 LASGITGQTIYVDAGYCIMGM 258

Length = 258

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 68.0 bits (167), Expect = 2e-13
 Identities = 68/265 (25%), Positives = 100/265 (37%), Gaps = 45/265 (16%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGA-----------------TVHTCSRTETELNE 59
           SL G T  +TG ++G+GLA+    +  GA                 T+HT +    E+  
Sbjct: 3   SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAE---EIEA 59

Query: 60  CIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNA 119
                   G +    V DV    Q    +      F G ++I VNN     L  T +   
Sbjct: 60  -------AGGQALPLVGDVRDEDQVAAAVAKAVERF-GGIDICVNNASAINLTGTEDTPM 111

Query: 120 EDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG--TVYSATKGAM 177
           + F L+   N    F + Q   P L+ S    I+ +S  L +        T Y+  K  M
Sbjct: 112 KRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFAPHTAYTMAKYGM 171

Query: 178 NQLAKNLACEWAKDNIRTNSVAP-WYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEV 236
           +     LA E+  D I  N++ P   I T     LLG  + +   +SRTP        E+
Sbjct: 172 SLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLLGGDEAMR--RSRTP--------EI 221

Query: 237 SS--LVAFLCMPAASYITGQTVCID 259
            +      L  PA  + TG    ID
Sbjct: 222 MADAAYEILSRPAREF-TGNF-LID 244

Length = 273

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 67.5 bits (165), Expect = 3e-13
 Identities = 66/257 (25%), Positives = 121/257 (47%), Gaps = 16/257 (6%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGA---TVHTCS-RTETELNECIHHLQMKGLKVT 72
           SL+G   L+ GG K LG  +  +L+  GA    +H  S  ++ +  E +  ++  G K  
Sbjct: 5   SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAV 64

Query: 73  GSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFES 132
               D+++    + L +   + F G+ +I +N VG  + KP +E +  ++  + + N +S
Sbjct: 65  AFQADLTTAAAVEKLFDDAKAAF-GRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKS 123

Query: 133 AFHLCQLAHPLLRASGAASIV-LMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKD 191
           AF   + A   L  +G   IV L++S LG  +      Y+ +K  +    +  + E+   
Sbjct: 124 AFFFIKEAGRHLNDNG--KIVTLVTSLLGAFTPFYSA-YAGSKAPVEHFTRAASKEFGAR 180

Query: 192 NIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMG-----RLGEPKEVSSLVAFLCMP 246
            I   +V P  + TPF  P  G  + V   K+   +       L + +++   + FL + 
Sbjct: 181 GISVTAVGPGPMDTPFFYPQEG-AEAVAYHKTAAALSPFSKTGLTDIEDIVPFIRFL-VT 238

Query: 247 AASYITGQTVCIDGGFT 263
              +ITGQT+ I+GG+T
Sbjct: 239 DGWWITGQTILINGGYT 255

Length = 257

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 67.8 bits (166), Expect = 3e-13
 Identities = 49/178 (27%), Positives = 75/178 (42%), Gaps = 6/178 (3%)

Query: 24  LVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQ 83
            +TG ++G G A  E     G  V   +R    L +       + L +   V D   R  
Sbjct: 7   FITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTD---RAA 63

Query: 84  RQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPL 143
               + T    F G+L+I VNN G  +     E    +    + TNF  A  + Q   P 
Sbjct: 64  VFAAVETAVEHF-GRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPY 122

Query: 144 LRASGAASIVLMSSALGIVS-ANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAP 200
           LR   +  I+ +SS  GI +    G +Y A+K A+  +++ LA E A+  I+   V P
Sbjct: 123 LREQRSGHIIQISSIGGISAFPMSG-IYHASKWALEGMSEALAQEVAEFGIKVTLVEP 179

Length = 275

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 67.2 bits (165), Expect = 3e-13
 Identities = 60/203 (29%), Positives = 87/203 (42%), Gaps = 27/203 (13%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNEC-------------IHHL 64
           L+    LVTG   G+G       +  GATV    RTE +L                I  L
Sbjct: 10  LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPL 69

Query: 65  QMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGT-SVLKPTLEYNAEDFS 123
            +            ++    Q L +T+   F G+L+  ++N G    L P  + + E + 
Sbjct: 70  DLLT----------ATPQNYQQLADTIEEQF-GRLDGVLHNAGLLGELGPMEQQDPEVWQ 118

Query: 124 LVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVS-ANVGTVYSATKGAMNQLAK 182
            VM  N  + F L Q   PLL  S AAS+V  SS++G    AN G  Y+ +K A   + +
Sbjct: 119 DVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGA-YAVSKFATEGMMQ 177

Query: 183 NLACEWAKDNIRTNSVAPWYIRT 205
            LA E+   N+R N + P   RT
Sbjct: 178 VLADEYQGTNLRVNCINPGGTRT 200

Length = 247

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 66.6 bits (163), Expect = 5e-13
 Identities = 51/188 (27%), Positives = 80/188 (42%), Gaps = 6/188 (3%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
           + L+TG + G+GL    EL   G  V    R   ++       +M  L  TG + D+   
Sbjct: 4   SVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVA------RMNSLGFTGILLDLDDP 57

Query: 82  PQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAH 141
              +   + V +L + +L    NN G  V  P    + +      STNF     L  L  
Sbjct: 58  ESVERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLL 117

Query: 142 PLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPW 201
           P +   G   IV+ SS +G++S      Y+A+K A+   +  L  E     I+ + + P 
Sbjct: 118 PAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPG 177

Query: 202 YIRTPFTE 209
            IRT FT+
Sbjct: 178 PIRTRFTD 185

Length = 256

>gnl|CDD|181020 PRK07533, PRK07533, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 66.1 bits (162), Expect = 9e-13
 Identities = 44/150 (29%), Positives = 75/150 (50%), Gaps = 10/150 (6%)

Query: 119 AEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMS--SALGIV-SANV-GTVYSATK 174
            E F+L M  +  S   + +LA PL+   G  S++ MS   A  +V + N+ G V    K
Sbjct: 113 REGFALAMDVSCHSFIRMARLAEPLMTNGG--SLLTMSYYGAEKVVENYNLMGPV----K 166

Query: 175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPK 234
            A+    + LA E     IR ++++P  ++T     +      +++   R P+ RL +  
Sbjct: 167 AALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPLRRLVDID 226

Query: 235 EVSSLVAFLCMPAASYITGQTVCIDGGFTV 264
           +V ++ AFL   AA  +TG T+ IDGG+ +
Sbjct: 227 DVGAVAAFLASDAARRLTGNTLYIDGGYHI 256

Length = 258

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 65.9 bits (161), Expect = 1e-12
 Identities = 50/207 (24%), Positives = 83/207 (40%), Gaps = 26/207 (12%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L G   L+TG + G+G A  E+ +  GATV   +R E  L+     +   G       CD
Sbjct: 38  LTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCD 97

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEY--NAEDFSLVMSTNFESAFH 135
           +S       L+  V     G ++I +NN G S+ +P  E      D    M  N+ +   
Sbjct: 98  LSDLDAVDALVADVEKRI-GGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLR 156

Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVGT------------VYSATKGAMNQLAKN 183
           L +   P +   G   I+           NV T            VY+A+K A++ +++ 
Sbjct: 157 LIRGLAPGMLERGDGHII-----------NVATWGVLSEASPLFSVYNASKAALSAVSRV 205

Query: 184 LACEWAKDNIRTNSVAPWYIRTPFTEP 210
           +  EW    + + ++    + TP   P
Sbjct: 206 IETEWGDRGVHSTTLYYPLVATPMIAP 232

Length = 293

>gnl|CDD|131732 TIGR02685, pter_reduc_Leis, pteridine reductase

 Score = 65.7 bits (160), Expect = 1e-12
 Identities = 59/266 (22%), Positives = 107/266 (40%), Gaps = 29/266 (10%)

Query: 23  ALVTGGTKGLGLAVVEELSMLGATV-----HTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           A+VTG  K +G ++   L   G  V      + +   T   E         +     + +
Sbjct: 4   AVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSN 63

Query: 78  VSSRPQR-QTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAED-----------FSLV 125
            ++   R + +I+     F G+ ++ VNN       P L  +A +            + +
Sbjct: 64  SATLFSRCEAIIDACFRAF-GRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAEL 122

Query: 126 MSTNFESAFHLCQLAHPLLRASGAA------SIVLMSSALGIVSANVGTVYSATKGAMNQ 179
             +N  + + L +        + A       SIV +  A+        T+Y+  K A+  
Sbjct: 123 FGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQPLLGFTMYTMAKHALEG 182

Query: 180 LAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMG-RLGEPKEVSS 238
           L ++ A E A   IR N VAP     P   P     +  ++ + + P+G R    ++++ 
Sbjct: 183 LTRSAALELAPLQIRVNGVAPGLSLLPDAMPF----EVQEDYRRKVPLGQREASAEQIAD 238

Query: 239 LVAFLCMPAASYITGQTVCIDGGFTV 264
           +V FL  P A YITG  + +DGG ++
Sbjct: 239 VVIFLVSPKAKYITGTCIKVDGGLSL 264

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. Length = 267

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 65.7 bits (161), Expect = 4e-12
 Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 9/201 (4%)

Query: 15  RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGS 74
           R  L G   L+TG + G+G A   +++  GATV   +R    L+E +  ++ KG      
Sbjct: 366 RGPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAY 425

Query: 75  VCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPT-LEYN-AEDFSLVMSTNFES 132
            CD++        +  + +   G ++  VNN G S+ +      +   D+   M+ N+  
Sbjct: 426 TCDLTDSAAVDHTVKDILAEH-GHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFG 484

Query: 133 AFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG--TVYSATKGAMNQLAKNLACEWAK 190
           A  L     P +R      +V +SS  G V  N    + Y A+K A++  +   A E   
Sbjct: 485 AVRLILGLLPHMRERRFGHVVNVSSI-G-VQTNAPRFSAYVASKAALDAFSDVAASETLS 542

Query: 191 DNIR-TNSVAPWYIRTPFTEP 210
           D I  T    P  +RTP   P
Sbjct: 543 DGITFTTIHMP-LVRTPMIAP 562

Length = 657

>gnl|CDD|187595 cd05334, DHPR_SDR_c_like, dihydropteridine reductase (DHPR), classical (c) SDRs

 Score = 62.0 bits (151), Expect = 2e-11
 Identities = 49/234 (20%), Positives = 89/234 (38%), Gaps = 28/234 (11%)

Query: 24  LVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQ 83
           LV GG   LG AVV+     G  V   S    E  E    + +            S   Q
Sbjct: 5   LVYGGRGALGSAVVQAFKSRGWWV--ASIDLAENEEADASIIVLDSD--------SFTEQ 54

Query: 84  RQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYN-AEDFSLVMSTNFESAFHLCQLAHP 142
            + ++ +V+ L  GK++  +   G          +  +++ L+   N  ++F    LA  
Sbjct: 55  AKQVVASVARLS-GKVDALICVAGGWAGGSAKSKSFVKNWDLMWKQNLWTSFIASHLATK 113

Query: 143 LLRASGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEW--AKDNIRTNSVA 199
            L + G   +++++ A   +    G + Y A K A++QL ++LA E          N++ 
Sbjct: 114 HLLSGG---LLVLTGAKAALEPTPGMIGYGAAKAAVHQLTQSLAAENSGLPAGSTANAIL 170

Query: 200 PWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG 253
           P  + TP     + +  F                + ++ L+ F    AA   +G
Sbjct: 171 PVTLDTPANRKAMPDADFSSWTP----------LEFIAELILFWASGAARPKSG 214

Dihydropteridine reductase is an NAD-binding protein related to the SDRs. It converts dihydrobiopterin into tetrahydrobiopterin, a cofactor necessary in catecholamines synthesis. Dihydropteridine reductase has the YXXXK of these tyrosine-dependent oxidoreductases, but lacks the typical upstream Asn and Ser catalytic residues. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 221

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 60.3 bits (147), Expect = 6e-11
 Identities = 54/187 (28%), Positives = 86/187 (45%), Gaps = 14/187 (7%)

Query: 21  MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSS 80
            TAL+TG ++G+G A+  EL+    T+    R    L+E    L       T    D++ 
Sbjct: 4   PTALITGASRGIGAAIARELAP-THTLLLGGRPAERLDELAAELP----GATPFPVDLT- 57

Query: 81  RPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLA 140
               + +   V  L  G+L++ V+N G + L P  E   +++   +  N  +   L +L 
Sbjct: 58  --DPEAIAAAVEQL--GRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLL 113

Query: 141 HPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAKDNIRTNSVA 199
            P LRA+    +V ++S  G+  AN G   Y+A+K A+  LA  L  E    N+R  SV 
Sbjct: 114 LPALRAAH-GHVVFINSGAGL-RANPGWGSYAASKFALRALADALREEEP-GNVRVTSVH 170

Query: 200 PWYIRTP 206
           P    T 
Sbjct: 171 PGRTDTD 177

Length = 227

>gnl|CDD|237099 PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 60.4 bits (147), Expect = 8e-11
 Identities = 46/169 (27%), Positives = 64/169 (37%), Gaps = 36/169 (21%)

Query: 124 LVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGI---------------------- 161
           LV   NF    HL +   P +   GA  IV ++S  G                       
Sbjct: 66  LVARVNFLGLRHLTEALLPRMAPGGA--IVNVASLAGAEWPQRLELHKALAATASFDEGA 123

Query: 162 --VSAN---VGTVYSATKGAMNQLAKNLACEWAKD-NIRTNSVAPWYIRTPFTEPL---L 212
             ++A+   + T Y  +K A+       A  W     IR N VAP  + TP        L
Sbjct: 124 AWLAAHPVALATGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSML 183

Query: 213 GNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGG 261
           G    VD       MGR     E ++++ FLC  AA +I G  + +DGG
Sbjct: 184 GQE-RVDSDA--KRMGRPATADEQAAVLVFLCSDAARWINGVNLPVDGG 229

Length = 241

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 59.9 bits (146), Expect = 1e-10
 Identities = 56/203 (27%), Positives = 84/203 (41%), Gaps = 32/203 (15%)

Query: 24  LVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK--GLKVTGSVCDVSSR 81
           L+TG + GLG  +  E +  G  +  C+R    L E    L  +  G+KV  +  DV+  
Sbjct: 6   LITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDH 65

Query: 82  PQRQTLINTVSSLFNGKLNIFVN-------NVGTSVL---KPTLEYNAEDFSLVMSTNFE 131
            Q   +         G   + VN        +GT      K T E           TNF 
Sbjct: 66  DQVFEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAE-----------TNFV 114

Query: 132 SAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG-----TVYSATKGAMNQLAKNLAC 186
           +A   C+ A  + R  G+  +VL+SS    VSA  G       Y+A+K  +  L + L  
Sbjct: 115 AALAQCEAAMEIFREQGSGHLVLISS----VSAVRGLPGVKAAYAASKAGVASLGEGLRA 170

Query: 187 EWAKDNIRTNSVAPWYIRTPFTE 209
           E AK  I+ +++ P YIR+    
Sbjct: 171 ELAKTPIKVSTIEPGYIRSEMNA 193

Length = 248

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 58.8 bits (143), Expect = 2e-10
 Identities = 51/189 (26%), Positives = 79/189 (41%), Gaps = 9/189 (4%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
            AL+TG + G+G A     +  G  +   +R++  L      L+  G+K      D+S+ 
Sbjct: 8   RALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNP 67

Query: 82  PQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAH 141
                 I  +   F G  ++ +NN G +   P LE    D+  V+  N  S F  C    
Sbjct: 68  EAIAPGIAELLEQF-GCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVL 126

Query: 142 PLLRASGAASIVLMSSALGIVSANV----GTVYSATKGAMNQLAKNLACEWAKDNIRTNS 197
           P +RA G   I+ +SS   I + N     G  Y  +K A+    K LA E     IR  +
Sbjct: 127 PGMRARGGGLIINVSS---IAARNAFPQWG-AYCVSKAALAAFTKCLAEEERSHGIRVCT 182

Query: 198 VAPWYIRTP 206
           +    + TP
Sbjct: 183 ITLGAVNTP 191

Length = 241

>gnl|CDD|180586 PRK06483, PRK06483, dihydromonapterin reductase; Provisional

 Score = 58.8 bits (143), Expect = 2e-10
 Identities = 60/260 (23%), Positives = 107/260 (41%), Gaps = 47/260 (18%)

Query: 21  MTA--LVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC-- 76
           M A  L+TG  + +GLA+   L   G  V    RT        H+  + GL+  G+ C  
Sbjct: 1   MPAPILITGAGQRIGLALAWHLLAQGQPVIVSYRT--------HYPAIDGLRQAGAQCIQ 52

Query: 77  -DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVL-KPTLEYNAEDFSLVMSTNFESAF 134
            D S+       I+ +    +G L   ++N    +  KP     A+  + +M  +  + +
Sbjct: 53  ADFSTNAGIMAFIDELKQHTDG-LRAIIHNASDWLAEKPGAPL-ADVLARMMQIHVNAPY 110

Query: 135 HLCQLAHPLLRASG--AASIVLMS-------SALGIVSANVGTVYSATKGAMNQLAKNLA 185
            L      LLR  G  A+ I+ ++       S   I        Y+A+K A++ +  + A
Sbjct: 111 LLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHI-------AYAASKAALDNMTLSFA 163

Query: 186 CEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRT----PMGRLGEPKEVSSLVA 241
            + A   ++ NS+AP  I        L N       + +      +      +E+  LV 
Sbjct: 164 AKLAP-EVKVNSIAPALI--------LFNEGDDAAYRQKALAKSLLKIEPGEEEIIDLVD 214

Query: 242 FLCMPAASYITGQTVCIDGG 261
           +L    + Y+TG+++ +DGG
Sbjct: 215 YLL--TSCYVTGRSLPVDGG 232

Length = 236

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 59.3 bits (144), Expect = 3e-10
 Identities = 45/196 (22%), Positives = 81/196 (41%), Gaps = 9/196 (4%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
             G  A++TG   G GLA     + LG  +      +  L+  +  L+ +G +V G   D
Sbjct: 4   FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTD 63

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           VS   Q + L +     F G +++  NN G        E +  D+  V+  N     H  
Sbjct: 64  VSDAAQVEALADAALERF-GAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGV 122

Query: 138 QLAHPLLRASGAAS------IVLMSSALGIVSANVGTVYSATKGAMNQLAKNL--ACEWA 189
           +   PL+ A+          IV  +S  G+++     +Y+ +K A+  L + L       
Sbjct: 123 RAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIYNVSKHAVVSLTETLYQDLSLV 182

Query: 190 KDNIRTNSVAPWYIRT 205
            D +  + + P+++ T
Sbjct: 183 TDQVGASVLCPYFVPT 198

Length = 287

>gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs

 Score = 57.2 bits (139), Expect = 5e-10
 Identities = 43/187 (22%), Positives = 68/187 (36%), Gaps = 31/187 (16%)

Query: 23  ALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSV-CDVSSR 81
            +V G T  +GLAV + LS  G  V T  R+                  +G    D++  
Sbjct: 1   IIVIGATGTIGLAVAQLLSAHGHEVITAGRS------------------SGDYQVDITDE 42

Query: 82  PQRQTLINTVSSLFN--GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQL 139
                   ++ +LF   G  +  V+  G +   P  E    DF   +++      +L + 
Sbjct: 43  -------ASIKALFEKVGHFDAIVSTAGDAEFAPLAELTDADFQRGLNSKLLGQINLVRH 95

Query: 140 AHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVA 199
             P L   G  SI L S  L       G   +   GA+    +  A E  +  IR N+V+
Sbjct: 96  GLPYLNDGG--SITLTSGILAQRPIPGGAAAATVNGALEGFVRAAAIELPRG-IRINAVS 152

Query: 200 PWYIRTP 206
           P  +   
Sbjct: 153 PGVVEES 159

Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198

>gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR)

 Score = 56.8 bits (137), Expect = 8e-10
 Identities = 29/162 (17%), Positives = 55/162 (33%), Gaps = 5/162 (3%)

Query: 94  LFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIV 153
           L   + ++ V+N         ++         +  N      L + A  L++A      +
Sbjct: 27  LVVSRRDVVVHNAAILDDGRLIDLTGSRIERAIRANVVGTRRLLEAARELMKAKRLGRFI 86

Query: 154 LMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG 213
           L+SS  G+  A     Y+A+K A++ LA+  A E   + +   +VA              
Sbjct: 87  LISSVAGLFGAPGLGGYAASKAALDGLAQQWASEGWGNGLPATAVACGTWAGSGMAKGPV 146

Query: 214 NGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT 255
             + +     R    R   P+EV+  +            G  
Sbjct: 147 APEEILGN--RRHGVRTMPPEEVARALLNA---LDRPKAGVC 183

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 56.3 bits (136), Expect = 2e-09
 Identities = 48/214 (22%), Positives = 82/214 (38%), Gaps = 29/214 (13%)

Query: 22  TALVTGGTKGLGLA--------------VVEELSMLGATVHTCSRTETELNECIHHLQMK 67
             L+TG + G+GL               V   +  L                 +  LQ+ 
Sbjct: 2   VVLITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKKGRLWEAAGALAGGTLETLQL- 60

Query: 68  GLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAED-FSLVM 126
                  VCD  S      +   V  +    +++ V N G  +L P LE  +ED  + V 
Sbjct: 61  ------DVCDSKS------VAAAVERVTERHVDVLVCNAGVGLLGP-LEALSEDAMASVF 107

Query: 127 STNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLAC 186
             N      + Q   P ++  G+  I++ SS  G+       VY A+K A+  L ++LA 
Sbjct: 108 DVNVFGTVRMLQAFLPDMKRRGSGRILVTSSVGGLQGLPFNDVYCASKFALEGLCESLAV 167

Query: 187 EWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDE 220
           +    N+  + +    + T F E +LG+ + V +
Sbjct: 168 QLLPFNVHLSLIECGPVHTAFMEKVLGSPEEVLD 201

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 55.7 bits (134), Expect = 3e-09
 Identities = 50/195 (25%), Positives = 86/195 (44%), Gaps = 5/195 (2%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSV- 75
           +L   T LVTG ++GLG  V +  +  GATV   +R + +L +    +   G     ++ 
Sbjct: 3   TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIR 62

Query: 76  CDV--SSRPQRQTLINTVSSLFNGKLNIFVNNVGT-SVLKPTLEYNAEDFSLVMSTNFES 132
            D+  +   + +    T++    GKL+  V+  G    L P       ++      N  +
Sbjct: 63  FDLMSAEEKEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVA 122

Query: 133 AFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAK-D 191
              L +   PLL+ S  AS++ +  + G         + A+K A+N L K  A EW +  
Sbjct: 123 PMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFGASKAALNYLCKVAADEWERFG 182

Query: 192 NIRTNSVAPWYIRTP 206
           N+R N + P  I +P
Sbjct: 183 NLRANVLVPGPINSP 197

Length = 239

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 54.5 bits (132), Expect = 3e-09
 Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 11/165 (6%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNE---CIHHLQMKGLKVTGSVCD 77
           T LVTGG  GLGL +   L+  GA  +   SR+     E    +  L+ +G +VT   CD
Sbjct: 2   TYLVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALLAELEARGAEVTVVACD 61

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           VS R   + L+  + +     L   ++  G           AEDF+ V++     A++L 
Sbjct: 62  VSDRDAVRALLAEIRADG-PPLRGVIHAAGVLRDALLANMTAEDFARVLAPKVTGAWNL- 119

Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLA 181
              H   R       VL SS  G++  + G   Y+A    ++ LA
Sbjct: 120 ---HEATRDRPLDFFVLFSSIAGVL-GSPGQANYAAANAFLDALA 160

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 55.0 bits (133), Expect = 6e-09
 Identities = 43/182 (23%), Positives = 74/182 (40%), Gaps = 1/182 (0%)

Query: 24  LVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQ 83
           ++TG   GLG A+    +  G  +      E    E +  L+  G       CDV    Q
Sbjct: 4   MITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQ 63

Query: 84  RQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPL 143
              L       + G +++ VNN G +      E + ED+   ++ N       C+   PL
Sbjct: 64  LTALAQACEEKWGG-IDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPL 122

Query: 144 LRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYI 203
            +   +  IV ++S  G++     + Y+  K  +  L++ L  E A D I  + V P + 
Sbjct: 123 FKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFF 182

Query: 204 RT 205
           +T
Sbjct: 183 QT 184

Length = 270

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 55.0 bits (133), Expect = 6e-09
 Identities = 62/244 (25%), Positives = 104/244 (42%), Gaps = 41/244 (16%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNEC----IHHLQMKGLKVTGSVCD 77
            ALVTG + G+G A    L+  G TV+  +R   ++ +     +H L +          D
Sbjct: 5   VALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLGVHPLSL----------D 54

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNA-EDFSLV-----MSTNFE 131
           V+     +  ++T+ +   G++++ VNN G         Y A ED  +         N  
Sbjct: 55  VTDEASIKAAVDTIIAE-EGRIDVLVNNAGYGS------YGAIEDVPIDEARRQFEVNLF 107

Query: 132 SAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKD 191
            A  L QL  P +RA  +  I+ +SS  G +   +G  Y ATK A+   +  L  E A  
Sbjct: 108 GAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALEGFSDALRLEVAPF 167

Query: 192 NIRTNSVAPWYIRTPF----TEPLL---GNGKFVDEV-------KSRTPMGRLGEPKEVS 237
            I    + P  I+T +     + LL   GNG + ++        +S    GRL +P  ++
Sbjct: 168 GIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPSVIA 227

Query: 238 SLVA 241
             ++
Sbjct: 228 DAIS 231

Length = 273

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 55.2 bits (133), Expect = 7e-09
 Identities = 46/186 (24%), Positives = 76/186 (40%), Gaps = 8/186 (4%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
             L+TG + G+G A+ +     G  V   +R      E +  L   G   T    DV+  
Sbjct: 3   VVLITGCSSGIGRALADAFKAAGYEVWATARKA----EDVEALAAAGF--TAVQLDVNDG 56

Query: 82  PQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAH 141
                L   + +  +G L++ +NN G   + P L+   E       TN  +   + +   
Sbjct: 57  AALARLAEELEAE-HGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALF 115

Query: 142 PLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPW 201
           PLLR S    +V + S  G++       Y A+K A++ L+  L  E A   ++   V P 
Sbjct: 116 PLLRRSRGL-VVNIGSVSGVLVTPFAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPG 174

Query: 202 YIRTPF 207
            I + F
Sbjct: 175 AIASQF 180

Length = 274

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 54.6 bits (132), Expect = 7e-09
 Identities = 53/197 (26%), Positives = 83/197 (42%), Gaps = 17/197 (8%)

Query: 21  MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSS 80
           +   +TG + G+G A+  E +  GAT+   +R    L      L     +V+    DV  
Sbjct: 3   LKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAA-RVSVYAADVR- 60

Query: 81  RPQRQTLINTVSSLFN--GKLNIFVNNVGTSVLKPTLEYNAED---FSLVMSTNFESAFH 135
                 L    +      G  ++ + N G SV   TL    ED   F  VM TN+   F 
Sbjct: 61  --DADALAAAAADFIAAHGLPDVVIANAGISV--GTLTEEREDLAVFREVMDTNY---FG 113

Query: 136 LCQLAHPLL---RASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDN 192
           +     P +   RA+   ++V ++S  G+        YSA+K A  +  ++L  E     
Sbjct: 114 MVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKAAAIKYLESLRVELRPAG 173

Query: 193 IRTNSVAPWYIRTPFTE 209
           +R  ++AP YIRTP T 
Sbjct: 174 VRVVTIAPGYIRTPMTA 190

Length = 257

>gnl|CDD|235776 PRK06300, PRK06300, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 54.8 bits (132), Expect = 9e-09
 Identities = 46/174 (26%), Positives = 83/174 (47%), Gaps = 6/174 (3%)

Query: 97  GKLNIFVNNVGTS--VLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAA-SIV 153
           G ++I V+++  S  + KP LE + + +   +ST+  S   L     P++   G+  S+ 
Sbjct: 118 GHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMNPGGSTISLT 177

Query: 154 LMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKD-NIRTNSVAPWYIRTPFTEPLL 212
            ++S   +     G   S+ K A+    K LA E  +   IR N+++   + +   + + 
Sbjct: 178 YLASMRAV--PGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIG 235

Query: 213 GNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNG 266
              + VD  +   P+    E ++V +  AFL  P AS ITG+T+ +D G  V G
Sbjct: 236 FIERMVDYYQDWAPLPEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGANVMG 289

Length = 299

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 52.9 bits (128), Expect = 2e-08
 Identities = 43/166 (25%), Positives = 71/166 (42%), Gaps = 13/166 (7%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGA-TVHTCSRT---ETELNECIHHLQMKGLKVTGSVCD 77
           T L+TGG  GLG A+   L+  GA  +   SR+          +  L+  G +VT   CD
Sbjct: 2   TYLITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAELEAAGARVTVVACD 61

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           V+ R     ++  + ++  G L   ++  G            E F+ V++     A++L 
Sbjct: 62  VADRDALAAVLAAIPAVE-GPLTGVIHAAGVLDDGVLASLTPERFAAVLAPKAAGAWNLH 120

Query: 138 QLAHPL-LRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLA 181
           +L   L L        VL SS  G++  + G   Y+A    ++ LA
Sbjct: 121 ELTADLPLDF-----FVLFSSIAGVL-GSPGQANYAAANAFLDALA 160

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 53.8 bits (130), Expect = 2e-08
 Identities = 47/189 (24%), Positives = 75/189 (39%), Gaps = 5/189 (2%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
            L+G    +TGG +G+GLA    L+ LGA V      E    E    L   GL V G   
Sbjct: 2   DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAEL---GL-VVGGPL 57

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           DV+        ++ V +   G +++ VNN G   + P L+        ++  N       
Sbjct: 58  DVTDPASFAAFLDAVEADL-GPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILG 116

Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTN 196
            +LA P +   G   +V ++S  G +       Y A+K A+         E     +  +
Sbjct: 117 SKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHAVVGFTDAARLELRGTGVHVS 176

Query: 197 SVAPWYIRT 205
            V P ++ T
Sbjct: 177 VVLPSFVNT 185

Length = 273

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 53.8 bits (130), Expect = 3e-08
 Identities = 45/190 (23%), Positives = 72/190 (37%), Gaps = 2/190 (1%)

Query: 20  GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVS 79
           G   +VTG   G+G       +  GA V      E         ++  G        DVS
Sbjct: 315 GKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVS 374

Query: 80  SRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQL 139
                +     V +   G  +I VNN G  +    L+ +AED+  V+  N     H C+L
Sbjct: 375 DADAMEAFAEWVRAEH-GVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRL 433

Query: 140 AHPLLRASGAAS-IVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSV 198
               +   G    IV ++SA     +     Y+ +K A+  L++ L  E A   I   ++
Sbjct: 434 FGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAAVLMLSECLRAELAAAGIGVTAI 493

Query: 199 APWYIRTPFT 208
            P ++ T   
Sbjct: 494 CPGFVDTNIV 503

Length = 582

>gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional

 Score = 52.2 bits (126), Expect = 5e-08
 Identities = 66/261 (25%), Positives = 112/261 (42%), Gaps = 47/261 (18%)

Query: 21  MTALVTGGTKGLGLAVVEELSMLG--ATVHTCSRTETELNECIHHLQMKGLKVTGSVCDV 78
             ALVTG  + +G A+  +L+  G    VH  +R+  E       ++  G +      D+
Sbjct: 10  RAALVTGAARRIGRAIALDLAAHGFDVAVH-YNRSRDEAEALAAEIRALGRRAVALQADL 68

Query: 79  SSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEY-NAEDFS-----LVMSTNFES 132
           +   + + L+   S+   G + + VNN   S+     EY +A  F+       M+TN  +
Sbjct: 69  ADEAEVRALVARASAAL-GPITLLVNN--ASLF----EYDSAASFTRASWDRHMATNLRA 121

Query: 133 AFHLCQLAHPLLRASGAASIVLM------SSALGIVSANVGTVYSATKGAMNQLAKNLAC 186
            F L Q     L A     +V M      +     +S      Y+ +K A+    + LA 
Sbjct: 122 PFVLAQAFARALPADARGLVVNMIDQRVWNLNPDFLS------YTLSKAALWTATRTLAQ 175

Query: 187 EWAKDNIRTNSVAPWYIRTPFTEPLLGNGK-----FVDEVKSRTPMGRLGEPKEVSSLVA 241
             A   IR N++ P         P L +G+     F  +  + TP+GR   P+E+++ V 
Sbjct: 176 ALAPR-IRVNAIGP--------GPTLPSGRQSPEDFARQHAA-TPLGRGSTPEEIAAAVR 225

Query: 242 FL-CMPAASYITGQTVCIDGG 261
           +L   P+   +TGQ + +DGG
Sbjct: 226 YLLDAPS---VTGQMIAVDGG 243

Length = 258

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 52.1 bits (125), Expect = 5e-08
 Identities = 45/192 (23%), Positives = 80/192 (41%), Gaps = 10/192 (5%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTET---ELNECIH----HLQMKGLK 70
           L G T  +TG ++G+G A+  + +  GA V   ++T     +L   I+     ++  G K
Sbjct: 1   LAGKTLFITGASRGIGKAIALKAARDGANVVIAAKTAEPHPKLPGTIYTAAEEIEAAGGK 60

Query: 71  VTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNF 130
               + D+    Q +  +      F G ++I VNN     L  TL+   + + L+M  N 
Sbjct: 61  ALPCIVDIRDEDQVRAAVEKAVEKFGG-IDILVNNASAISLTGTLDTPMKRYDLMMGVNT 119

Query: 131 ESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG--TVYSATKGAMNQLAKNLACEW 188
              +   +   P L+ S    I+ +S  L +        T Y+  K  M+     +A E+
Sbjct: 120 RGTYLCSKACLPYLKKSKNPHILNLSPPLNLNPKWFKNHTAYTMAKYGMSMCVLGMAEEF 179

Query: 189 AKDNIRTNSVAP 200
               I  N++ P
Sbjct: 180 KPGGIAVNALWP 191

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 52.3 bits (126), Expect = 5e-08
 Identities = 48/210 (22%), Positives = 76/210 (36%), Gaps = 3/210 (1%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           SL G   +VTG  +G+G  +   L   GA +      E EL      L      +T  V 
Sbjct: 6   SLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLT-VVA 64

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           DV+     Q         F G +++ V N G +      + + + F  V+  N    FH 
Sbjct: 65  DVTDLAAMQAAAEEAVERF-GGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHT 123

Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTN 196
            +   P L       ++ +SS     +A     Y A+K  +   A  L  E A   +   
Sbjct: 124 VRATLPALIERR-GYVLQVSSLAAFAAAPGMAAYCASKAGVEAFANALRLEVAHHGVTVG 182

Query: 197 SVAPWYIRTPFTEPLLGNGKFVDEVKSRTP 226
           S    +I T        +     E+++R P
Sbjct: 183 SAYLSWIDTDLVRDADADLPAFRELRARLP 212

Length = 296

>gnl|CDD|169553 PRK08690, PRK08690, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 51.5 bits (123), Expect = 9e-08
 Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 3/133 (2%)

Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAKDNIR 194
           L + A P++R   +A + L  S LG V A     V    K ++    +  A    K+ IR
Sbjct: 127 LAKAARPMMRGRNSAIVAL--SYLGAVRAIPNYNVMGMAKASLEAGIRFTAACLGKEGIR 184

Query: 195 TNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ 254
            N ++   I+T     +   GK +  V +  P+ R    +EV +  AFL    +S ITG+
Sbjct: 185 CNGISAGPIKTLAASGIADFGKLLGHVAAHNPLRRNVTIEEVGNTAAFLLSDLSSGITGE 244

Query: 255 TVCIDGGFTVNGF 267
              +DGG+++N  
Sbjct: 245 ITYVDGGYSINAL 257

Length = 261

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 51.6 bits (124), Expect = 1e-07
 Identities = 55/243 (22%), Positives = 96/243 (39%), Gaps = 33/243 (13%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTE----------TELNECIHHLQMKGLKV 71
            A+VTG + G GL    EL+  G  V    R            T+LN    +++++ L V
Sbjct: 5   IAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLN-LQQNIKVQQLDV 63

Query: 72  TGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFE 131
           T    D +S    Q ++  +     G++++ VNN G +      E   E++     TN  
Sbjct: 64  T----DQNSIHNFQLVLKEI-----GRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVF 114

Query: 132 SAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKD 191
            A  + Q   P +R   +  I+ +SS  G V     + Y ++K A+   +++L  E    
Sbjct: 115 GAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKYALEGFSESLRLELKPF 174

Query: 192 NIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKS--RTPMGRL-----------GEPKEVSS 238
            I    + P    T   E      +   E  S  +  M ++           G P +V++
Sbjct: 175 GIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNPIDVAN 234

Query: 239 LVA 241
           L+ 
Sbjct: 235 LIV 237

Length = 280

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 51.3 bits (123), Expect = 2e-07
 Identities = 50/191 (26%), Positives = 80/191 (41%), Gaps = 2/191 (1%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
            L G   ++TG + G+G A  E  +  GA +   +R E  L       +  G +V     
Sbjct: 4   PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPT 63

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           DV+   Q + L    +S F G+++++VNNVG   +    E   E    V+ TN       
Sbjct: 64  DVTDADQVKALATQAAS-FGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRD 122

Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKD-NIRT 195
              A P+ +  G    + M S  G  +      YSA+K  +   ++ L  E A   +I  
Sbjct: 123 AHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKFGLRGFSEALRGELADHPDIHV 182

Query: 196 NSVAPWYIRTP 206
             V P ++ TP
Sbjct: 183 CDVYPAFMDTP 193

Length = 330

>gnl|CDD|181609 PRK09009, PRK09009, C factor cell-cell signaling protein; Provisional

 Score = 49.3 bits (118), Expect = 4e-07
 Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 30/209 (14%)

Query: 21  MTALVTGGTKGLGLAVVEEL--SMLGATVH-TCSRTETEL-NECIHHLQMKGLKVTGSVC 76
           M  L+ GG+ G+G A+V++L      ATVH T    + +  ++ +    +          
Sbjct: 1   MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPDFQHDNVQWHAL---------- 50

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVG---TSVLKPTLEYNAED---FSLVMSTNF 130
           DV+   +    I  +S  F  +L+  +N VG   T    P     A D   F   ++ N 
Sbjct: 51  DVTDEAE----IKQLSEQFT-QLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNT 105

Query: 131 ESAFHLCQLAHPLLRASGAASIVLMSSALGIVSAN-VGTVYS--ATKGAMNQLAKNLACE 187
             +  L +   P L+ S +A   ++S+ +G +S N +G  YS  A+K A+N   K L+ E
Sbjct: 106 LPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGWYSYRASKAALNMFLKTLSIE 165

Query: 188 WAKD--NIRTNSVAPWYIRTPFTEPLLGN 214
           W +   +    ++ P    T  ++P   N
Sbjct: 166 WQRSLKHGVVLALHPGTTDTALSKPFQQN 194

Length = 235

>gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs

 Score = 49.1 bits (117), Expect = 4e-07
 Identities = 43/214 (20%), Positives = 74/214 (34%), Gaps = 17/214 (7%)

Query: 23  ALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRP 82
           AL+ G T G+G A+   L+  G  +    R    L           +       DV++  
Sbjct: 1   ALILGATGGIGRALARALAGRGWRLLLSGRDAGALAGL-----AAEVGALARPADVAAEL 55

Query: 83  QRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHP 142
           +   L   +     G L++ V   G  + KP        +  ++  N   A  +  L H 
Sbjct: 56  EVWALAQEL-----GPLDLLVYAAGAILGKPLARTKPAAWRRILDANLTGAALV--LKHA 108

Query: 143 LLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWY 202
           L   +  A +V + +   +V     + Y+A K A+    +    E     +R   V P  
Sbjct: 109 LALLAAGARLVFLGAYPELVMLPGLSAYAAAKAALEAYVEVARKEVRG--LRLTLVRPPA 166

Query: 203 IRTPFTEPLLGNGKFV---DEVKSRTPMGRLGEP 233
           + T    P     K     ++V +       GEP
Sbjct: 167 VDTGLWAPPGRLPKGALSPEDVAAAILEAHQGEP 200

Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 49.7 bits (119), Expect = 4e-07
 Identities = 42/191 (21%), Positives = 75/191 (39%), Gaps = 3/191 (1%)

Query: 21  MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC-DVS 79
               VTG   G+G A    L+  GA +    R    L + +   +  G  V      D+S
Sbjct: 1   KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDIS 60

Query: 80  SRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQ- 138
                      + +   G +++ +N  G S          E +  ++  N     H+ + 
Sbjct: 61  DYDAVAAFAADIHAAH-GSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIET 119

Query: 139 LAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSV 198
              P++ A     +V +SSA G+V+      YSA+K  +  L++ L  + A+  I  + V
Sbjct: 120 FVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLRGLSEVLRFDLARHGIGVSVV 179

Query: 199 APWYIRTPFTE 209
            P  ++TP   
Sbjct: 180 VPGAVKTPLVN 190

Length = 272

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score = 49.7 bits (119), Expect = 5e-07
 Identities = 62/267 (23%), Positives = 108/267 (40%), Gaps = 37/267 (13%)

Query: 18  LQGMTALVTGGTKGLGLA------------VVEELSMLGATVHTCSRTETELNECIHHLQ 65
           L G   +VTG   G+G A            VV ++   G  +   +   +     +  + 
Sbjct: 4   LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDI---GVGLDGSASGGSAAQAVVDEIV 60

Query: 66  MKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNA--EDFS 123
             G +   +  D++       L++     F G L++ VNN G  +L+  +  N   E++ 
Sbjct: 61  AAGGEAVANGDDIADWDGAANLVDAAVETF-GGLDVLVNNAG--ILRDRMIANMSEEEWD 117

Query: 124 LVMSTNFESAFHLCQLAHPLLRASG------AASIVLMSSALGIVSANVGTV-YSATKGA 176
            V++ + +  F   + A    RA         A I+  SS  G +  +VG   YSA K  
Sbjct: 118 AVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAG-LQGSVGQGNYSAAKAG 176

Query: 177 MNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLG--EPK 234
           +  L    A E  +  +  N++AP   RT  TE +        E+ ++   G      P+
Sbjct: 177 IAALTLVAAAELGRYGVTVNAIAP-AARTRMTETVFA------EMMAKPEEGEFDAMAPE 229

Query: 235 EVSSLVAFLCMPAASYITGQTVCIDGG 261
            VS LV +L    +  +TG+   ++GG
Sbjct: 230 NVSPLVVWLGSAESRDVTGKVFEVEGG 256

Length = 286

>gnl|CDD|178331 PLN02730, PLN02730, enoyl-[acyl-carrier-protein] reductase

 Score = 49.0 bits (117), Expect = 7e-07
 Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 4/173 (2%)

Query: 97  GKLNIFVNNV--GTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVL 154
           G ++I V+++  G  V KP LE + + +   +S +  S   L Q   P++   G ASI L
Sbjct: 119 GSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPIMN-PGGASISL 177

Query: 155 MSSALGIVSANVGTVYSATKGAMNQLAKNLACEWA-KDNIRTNSVAPWYIRTPFTEPLLG 213
              A   +    G   S+ K A+    + LA E   K  IR N+++   + +   + +  
Sbjct: 178 TYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGF 237

Query: 214 NGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNG 266
               ++   +  P+ +     EV +  AFL  P AS ITG T+ +D G    G
Sbjct: 238 IDDMIEYSYANAPLQKELTADEVGNAAAFLASPLASAITGATIYVDNGLNAMG 290

Length = 303

>gnl|CDD|236308 PRK08594, PRK08594, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 49.0 bits (117), Expect = 7e-07
 Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 11/137 (8%)

Query: 132 SAFHLCQLAH---PLLRASGAASIVLMSSALG---IVSANVGTVYSATKGAMNQLAKNLA 185
           SA+ L  +A     L+   G  SIV ++   G   + + NV  V    K ++    K LA
Sbjct: 122 SAYSLTAVAREAKKLMTEGG--SIVTLTYLGGERVVQNYNVMGV---AKASLEASVKYLA 176

Query: 186 CEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCM 245
            +  KD IR N+++   IRT   + + G    + E++ R P+ R    +EV    AFL  
Sbjct: 177 NDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERAPLRRTTTQEEVGDTAAFLFS 236

Query: 246 PAASYITGQTVCIDGGF 262
             +  +TG+ + +D G+
Sbjct: 237 DLSRGVTGENIHVDSGY 253

Length = 257

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 47.4 bits (113), Expect = 2e-06
 Identities = 42/188 (22%), Positives = 79/188 (42%), Gaps = 19/188 (10%)

Query: 21  MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTE-------TELNECIHHLQMKGLKVTG 73
           M  LVTG T G G  +       G  V    R +        EL + ++  Q+       
Sbjct: 1   MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQL------- 53

Query: 74  SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSV-LKPTLEYNAEDFSLVMSTNFES 132
              DV +R   + ++ ++ + +   +++ VNN G ++ L+P  + + ED+  ++ TN + 
Sbjct: 54  ---DVRNRAAIEEMLASLPAEWR-NIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKG 109

Query: 133 AFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDN 192
             ++ +   P +       I+ + S  G      G VY ATK  + Q + NL  +     
Sbjct: 110 LVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTA 169

Query: 193 IRTNSVAP 200
           +R   + P
Sbjct: 170 VRVTDIEP 177

Length = 248

>gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase

 Score = 47.2 bits (112), Expect = 3e-06
 Identities = 54/199 (27%), Positives = 84/199 (42%), Gaps = 15/199 (7%)

Query: 20  GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK--GLKVTGSVCD 77
           G  ALVTG T G+G     +L+  G  +   +R   +L +    +Q K    ++   V D
Sbjct: 53  GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVD 112

Query: 78  VSSRPQR--QTLINTVSSLFNGKLNIFVNNVGTS--VLKPTLEYNAEDFSLVMSTNFESA 133
            S       + +  T+  L  G   + +NNVG S    +   E + E    ++  N E  
Sbjct: 113 FSGDIDEGVKRIKETIEGLDVG---VLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGT 169

Query: 134 FHLCQLAHP--LLRASGAASIVLMSSALGIV--SANVGTVYSATKGAMNQLAKNLACEWA 189
             + Q   P  L R  GA  I+ + S   IV  S  +  VY+ATK  ++Q ++ L  E+ 
Sbjct: 170 TKVTQAVLPGMLKRKKGA--IINIGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYK 227

Query: 190 KDNIRTNSVAPWYIRTPFT 208
           K  I      P Y+ T   
Sbjct: 228 KSGIDVQCQVPLYVATKMA 246

Length = 320

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 46.9 bits (112), Expect = 3e-06
 Identities = 47/198 (23%), Positives = 72/198 (36%), Gaps = 22/198 (11%)

Query: 24  LVTGGTKGLGLAVVEELSMLGATVHTCSRTE-----TELNEC----IHHLQMKGLKVTGS 74
           L+TG   G G  + ++L  LG TV     T+      EL       +  LQ+        
Sbjct: 4   LITGCDSGFGNLLAKKLDSLGFTVLAGCLTKNGPGAKELRRVCSDRLRTLQL-------- 55

Query: 75  VCDVSSRPQRQTLINTVSSLFNGK-LNIFVNNVGTS-VLKPTLEYNAEDFSLVMSTNFES 132
             DV+   Q +     V      K L   VNN G             +D+   M  N   
Sbjct: 56  --DVTKPEQIKRAAQWVKEHVGEKGLWGLVNNAGILGFGGDEELLPMDDYRKCMEVNLFG 113

Query: 133 AFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDN 192
              + +   PLLR +    +V +SS  G V    G  Y A+K A+   + +L  E     
Sbjct: 114 TVEVTKAFLPLLRRA-KGRVVNVSSMGGRVPFPAGGAYCASKAAVEAFSDSLRRELQPWG 172

Query: 193 IRTNSVAPWYIRTPFTEP 210
           ++ + + P   +T  T  
Sbjct: 173 VKVSIIEPGNFKTGITGN 190

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|235694 PRK06079, PRK06079, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 46.6 bits (111), Expect = 4e-06
 Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 15/194 (7%)

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAED-----FSLVMSTNF 130
           CDV+S    +    T+     GK++  V+ +  +  K  L  N  D     ++L    + 
Sbjct: 62  CDVASDESIERAFATIKERV-GKIDGIVHAIAYAK-KEELGGNVTDTSRDGYALAQDISA 119

Query: 131 ESAFHLCQLAHPLLRASGAASIVLMS---SALGIVSANVGTVYSATKGAMNQLAKNLACE 187
            S   + + A PLL     ASIV ++   S   I + NV  +    K A+    + LA +
Sbjct: 120 YSLIAVAKYARPLLNPG--ASIVTLTYFGSERAIPNYNVMGI---AKAALESSVRYLARD 174

Query: 188 WAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA 247
             K  IR N+++   ++T     + G+   + E  SRT  G     +EV +  AFL    
Sbjct: 175 LGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVDGVGVTIEEVGNTAAFLLSDL 234

Query: 248 ASYITGQTVCIDGG 261
           ++ +TG  + +D G
Sbjct: 235 STGVTGDIIYVDKG 248

Length = 252

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 45.8 bits (109), Expect = 8e-06
 Identities = 50/231 (21%), Positives = 83/231 (35%), Gaps = 32/231 (13%)

Query: 22  TALVTGGTKGLGLAVVEELSMLG----ATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           T L+TG   G G  V   L+  G    A V    +  T L         +GL +     D
Sbjct: 4   TILITGAGSGFGREVALRLARKGHNVIAGVQIAPQV-TALRA---EAARRGLALRVEKLD 59

Query: 78  VSS---RPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAF 134
           ++    R Q               +++ +NN G       ++   E    +  TN     
Sbjct: 60  LTDAIDRAQAAEW----------DVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPL 109

Query: 135 HLCQLAHPLLRASGAASIVLMSSALGIVS-ANVGTVYSATKGAMNQLAKNLACEWAKDNI 193
            L Q     + A G   +V  SS  G+++    G  Y A+K A+  +A+ +  E     I
Sbjct: 110 ELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGA-YCASKHALEAIAEAMHAELKPFGI 168

Query: 194 RTNSVAPWYIRTPFTEPLLGNGK--------FVDEVKSRTPMGRLGEPKEV 236
           +  +V P    T F + +    K        F D      P+ +  +P+E+
Sbjct: 169 QVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFPLEQF-DPQEM 218

Length = 257

>gnl|CDD|236173 PRK08177, PRK08177, short chain dehydrogenase; Provisional

 Score = 44.6 bits (106), Expect = 1e-05
 Identities = 46/197 (23%), Positives = 78/197 (39%), Gaps = 30/197 (15%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
           TAL+ G ++GLGL +V+ L   G  V    R            Q   L+    V      
Sbjct: 3   TALIIGASRGLGLGLVDRLLERGWQVTATVRGPQ---------QDTALQALPGV------ 47

Query: 82  PQRQTL-INTVSSL--FNGKLN------IFVN-NVGTSVLKPTLEYNAEDFSLVMSTNFE 131
              + L +N  +SL     +L       +FVN  +     +   +  A +   +  TN  
Sbjct: 48  -HIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAI 106

Query: 132 SAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGT---VYSATKGAMNQLAKNLACEW 188
           +   L +     +R  G   +  MSS LG V    G    +Y A+K A+N + ++   E 
Sbjct: 107 APIRLARRLLGQVRP-GQGVLAFMSSQLGSVELPDGGEMPLYKASKAALNSMTRSFVAEL 165

Query: 189 AKDNIRTNSVAPWYIRT 205
            +  +   S+ P +++T
Sbjct: 166 GEPTLTVLSMHPGWVKT 182

Length = 225

>gnl|CDD|135642 PRK05884, PRK05884, short chain dehydrogenase; Provisional

 Score = 44.0 bits (104), Expect = 2e-05
 Identities = 61/246 (24%), Positives = 87/246 (35%), Gaps = 34/246 (13%)

Query: 21  MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSS 80
           +  LVTGG   LG  + E     G  V        +L      +  K L V   VCD + 
Sbjct: 1   VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDL-----EVAAKELDVDAIVCDNTD 55

Query: 81  RPQRQTLINTVSSLFNGKLNIFVN--NVGTSVLKP---TLEYNAEDFSLVMSTNFESAFH 135
                  +     LF   L+  VN          P   +L   A  +   +     SA  
Sbjct: 56  ----PASLEEARGLFPHHLDTIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVL 111

Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRT 195
             Q     LR SG + I ++       +   G+  +A K A++      A  +    I  
Sbjct: 112 TVQSVGDHLR-SGGSIISVVPE-----NPPAGSAEAAIKAALSNWTAGQAAVFGTRGITI 165

Query: 196 NSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT 255
           N+VA      P  + L           SRTP     E   ++ L  FL  PAA +ITGQT
Sbjct: 166 NAVACGRSVQPGYDGL-----------SRTPPPVAAE---IARLALFLTTPAARHITGQT 211

Query: 256 VCIDGG 261
           + +  G
Sbjct: 212 LHVSHG 217

Length = 223

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 44.3 bits (105), Expect = 2e-05
 Identities = 46/189 (24%), Positives = 74/189 (39%), Gaps = 8/189 (4%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
           T  +TG + G G  + E L   G  V    R    L++        G ++     DV+  
Sbjct: 4   TWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKAR---YGDRLWVLQLDVTDS 60

Query: 82  PQRQTLINTVSSLFN--GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQL 139
              +     V   F   G++++ V+N G  +     E +       + TN   +  + + 
Sbjct: 61  AAVRA---VVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRA 117

Query: 140 AHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVA 199
           A P LR  G   IV +SS  G ++    ++Y ATK  +    + +A E A   I    V 
Sbjct: 118 ALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVE 177

Query: 200 PWYIRTPFT 208
           P   RT F 
Sbjct: 178 PGPARTNFG 186

Length = 276

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 43.9 bits (104), Expect = 3e-05
 Identities = 40/174 (22%), Positives = 65/174 (37%), Gaps = 4/174 (2%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNE-CIHHLQMKGLKVTGSVCDVSS 80
            A V G   GLG A+    +  G +V   +R E +L    +  ++  G        D   
Sbjct: 1   VAAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAGGSAKAVPTDARD 60

Query: 81  RPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLA 140
             +   L + +     G L + V N G +V  P LE     F  V        F   + A
Sbjct: 61  EDEVIALFDLIEEEI-GPLEVLVYNAGANVWFPILETTPRVFEKVWEMAAFGGFLAAREA 119

Query: 141 HPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAKDNI 193
              + A G  +I + + A   +    G   ++  K A+  LA+++A E     I
Sbjct: 120 AKRMLARGRGTI-IFTGATASLRGRAGFAAFAGAKFALRALAQSMARELGPKGI 172

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|180399 PRK06101, PRK06101, short chain dehydrogenase; Provisional

 Score = 42.5 bits (100), Expect = 8e-05
 Identities = 45/195 (23%), Positives = 76/195 (38%), Gaps = 24/195 (12%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNEC------IHHLQMKGLKVTGSV 75
             L+TG T G+G  +  + +  G  V  C R ++ L+E       I  L           
Sbjct: 3   AVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAF--------- 53

Query: 76  CDVSSRPQRQTLINTVSSL-FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAF 134
            DV+  P  +     +S L F  +L IF  N G        + +A   + V + N     
Sbjct: 54  -DVTDHPGTK---AALSQLPFIPELWIF--NAGDCEYMDDGKVDATLMARVFNVNVLGVA 107

Query: 135 HLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIR 194
           +  +   P L  S    +V++ S    ++      Y A+K A+   A+ L  +     I 
Sbjct: 108 NCIEGIQPHL--SCGHRVVIVGSIASELALPRAEAYGASKAAVAYFARTLQLDLRPKGIE 165

Query: 195 TNSVAPWYIRTPFTE 209
             +V P ++ TP T+
Sbjct: 166 VVTVFPGFVATPLTD 180

Length = 240

>gnl|CDD|180789 PRK06997, PRK06997, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 42.5 bits (100), Expect = 8e-05
 Identities = 58/199 (29%), Positives = 88/199 (44%), Gaps = 14/199 (7%)

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMS-TNFE--- 131
           CDV+S  Q   L  ++   ++G L+  V+++G     P  E  A DF   +S  NF    
Sbjct: 63  CDVASDEQIDALFASLGQHWDG-LDGLVHSIG---FAPR-EAIAGDFLDGLSRENFRIAH 117

Query: 132 --SAFHLCQLAHPLLRASGAASIVLMSSALGI--VSANVGTVYSATKGAMNQLAKNLACE 187
             SA+    LA   L      + +L  S LG   V  N  T+  A K ++    + LA  
Sbjct: 118 DISAYSFPALAKAALPMLSDDASLLTLSYLGAERVVPNYNTMGLA-KASLEASVRYLAVS 176

Query: 188 WAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA 247
                IR N ++   I+T     +   GK +D V+S  P+ R    +EV ++ AFL    
Sbjct: 177 LGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESNAPLRRNVTIEEVGNVAAFLLSDL 236

Query: 248 ASYITGQTVCIDGGFTVNG 266
           AS +TG+   +D GF    
Sbjct: 237 ASGVTGEITHVDSGFNAVV 255

Length = 260

>gnl|CDD|181187 PRK07984, PRK07984, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 42.6 bits (100), Expect = 9e-05
 Identities = 24/96 (25%), Positives = 48/96 (50%)

Query: 169 VYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMG 228
           V    K ++    + +A     + +R N+++   IRT     +    K +   ++ TP+ 
Sbjct: 158 VMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIR 217

Query: 229 RLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTV 264
           R    ++V +  AFLC   ++ I+G+ V +DGGF++
Sbjct: 218 RTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSI 253

Length = 262

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 42.7 bits (101), Expect = 1e-04
 Identities = 41/170 (24%), Positives = 64/170 (37%), Gaps = 17/170 (10%)

Query: 24  LVTGGTKGLGLAVVEEL-SMLGATVHTCSRTETELNECIHHLQMKGLKVTGSV-----CD 77
           LVTGG  G+G A+   L    GA +    R+     E      +  L+  G+       D
Sbjct: 209 LVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGARVLYISAD 268

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYN--AEDFSLVMSTNFESAFH 135
           V+     + L+  V   + G ++  ++  G  VL+  L     AEDF  V++   +   +
Sbjct: 269 VTDAAAVRRLLEKVRERY-GAIDGVIHAAG--VLRDALLAQKTAEDFEAVLAPKVDGLLN 325

Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNL 184
           L Q     L        VL SS         G   Y+A    ++  A  L
Sbjct: 326 LAQ----ALADEPLDFFVLFSSVSAFF-GGAGQADYAAANAFLDAFAAYL 370

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|180774 PRK06953, PRK06953, short chain dehydrogenase; Provisional

 Score = 41.6 bits (98), Expect = 2e-04
 Identities = 46/177 (25%), Positives = 71/177 (40%), Gaps = 25/177 (14%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
           T L+ G ++G+G   V +    G  V   +R        +  LQ  G +      DV+  
Sbjct: 3   TVLIVGASRGIGREFVRQYRADGWRVIATARDA----AALAALQALGAEAL--ALDVA-D 55

Query: 82  PQRQTLINTVSSL---FNG-KLNIFVNNVGTSVLKPTLE----YNAEDFSLVMSTNFESA 133
           P       +V+ L    +G  L+  V   G  V  P  E       EDF  VM TN    
Sbjct: 56  P------ASVAGLAWKLDGEALDAAVYVAG--VYGPRTEGVEPITREDFDAVMHTNVLGP 107

Query: 134 FHLCQLAHPLLRASGAASIVLMS--SALGIVSANVGTVYSATKGAMNQLAKNLACEW 188
             L  +  PL+ A+G    VL S   ++G  +   G +Y A+K A+N   +  + + 
Sbjct: 108 MQLLPILLPLVEAAGGVLAVLSSRMGSIGDATGTTGWLYRASKAALNDALRAASLQA 164

Length = 222

>gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional

 Score = 40.4 bits (95), Expect = 4e-04
 Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 15/157 (9%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHL--QMKGLKVTGSV 75
           L G  A+VTG + GLGL +   L+  GA V    R   +    +  +   +   K++   
Sbjct: 12  LSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRA 71

Query: 76  CDVSSRPQRQTLINTVSSLFNGK-LNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAF 134
            D+SS      L   + +   G+ +++ +NN G  +  P  +  A+ F L   TN    F
Sbjct: 72  LDLSSLASVAALGEQLRA--EGRPIHLLINNAGV-MTPPERQTTADGFELQFGTNHLGHF 128

Query: 135 HLCQLAH--PLLRASGAASIVLMSSALGIVSANVGTV 169
            L   AH  PLLRA G A +   SS    ++A  G +
Sbjct: 129 AL--TAHLLPLLRA-GRARVTSQSS----IAARRGAI 158

Length = 313

>gnl|CDD|236229 PRK08303, PRK08303, short chain dehydrogenase; Provisional

 Score = 40.4 bits (95), Expect = 6e-04
 Identities = 54/218 (24%), Positives = 90/218 (41%), Gaps = 33/218 (15%)

Query: 13  QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRT-----------ET--ELNE 59
                L+G  ALV G T+G G  +  EL   GATV+   R+           ET  E  E
Sbjct: 1   PMMKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAE 60

Query: 60  CIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNV-GTSVL----KPT 114
            +     +G+ V     D     Q + L+  +     G+L+I VN++ G   L    KP 
Sbjct: 61  LVTAAGGRGIAVQ---VDHLVPEQVRALVERIDRE-QGRLDILVNDIWGGEKLFEWGKPV 116

Query: 115 LEYNAED----FSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSAN---VG 167
            E++ +       L + T+  ++      A PLL       +V ++      +A    + 
Sbjct: 117 WEHSLDKGLRMLRLAIDTHLITSHF----ALPLLIRRPGGLVVEITDGTAEYNATHYRLS 172

Query: 168 TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRT 205
             Y   K ++N+LA +LA E A       ++ P ++R+
Sbjct: 173 VFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRS 210

Length = 305

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 40.3 bits (94), Expect = 6e-04
 Identities = 37/174 (21%), Positives = 57/174 (32%), Gaps = 34/174 (19%)

Query: 21  MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSS 80
           M  LVTGG   +G  +VE L   G  V    R    L+  +  ++     V   + D   
Sbjct: 1   MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLSGVEF----VVLDLTD--- 53

Query: 81  RPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLA 140
                   + V  L  G  +  ++    S      + NA D +  +  N +   +L + A
Sbjct: 54  -------RDLVDELAKGVPDAVIHLAAQS---SVPDSNASDPAEFLDVNVDGTLNLLEAA 103

Query: 141 HPLLRASGAASIVLMSSALGIVSANVG-------------TVYSATKGAMNQLA 181
               RA+G    V  SS   +                     Y  +K A  QL 
Sbjct: 104 ----RAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLL 153

Length = 314

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 39.6 bits (93), Expect = 8e-04
 Identities = 48/202 (23%), Positives = 72/202 (35%), Gaps = 36/202 (17%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETEL----NECIHHLQMKGLKVTGSVCD 77
           + L+TG + G+G      L   G  V    R E ++     E +   Q+          D
Sbjct: 6   SILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEGLEAFQL----------D 55

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNN-----------VGTSVLKPTLEYNAEDFSLVM 126
            +       L+  V  L  G+L+   NN           + T  L+   E          
Sbjct: 56  YAEPESIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFE---------- 105

Query: 127 STNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLAC 186
             NF     L +   P++R  G   IV  SS LG+V       Y+A+K A+  L+  L  
Sbjct: 106 -ANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIEGLSLTLRM 164

Query: 187 EWAKDNIRTNSVAPWYIRTPFT 208
           E     I  + + P  I T F 
Sbjct: 165 ELQGSGIHVSLIEPGPIETRFR 186

Length = 277

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 39.3 bits (92), Expect = 0.001
 Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 5/89 (5%)

Query: 23  ALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRP 82
            ++TG ++GLG A+  +L   G  V + SRTE +  E     +     +T    D+    
Sbjct: 4   VIITGTSQGLGEAIANQLLEKGTHVISISRTENK--ELTKLAEQYNSNLTFHSLDLQDVH 61

Query: 83  QRQTLINTVSS---LFNGKLNIFVNNVGT 108
           + +T  N + S     N      +NN G 
Sbjct: 62  ELETNFNEILSSIQEDNVSSIHLINNAGM 90

Length = 251

>gnl|CDD|187582 cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatty acid synthase (FAS), complex (x) SDRs

 Score = 39.7 bits (93), Expect = 0.001
 Identities = 38/161 (23%), Positives = 60/161 (37%), Gaps = 9/161 (5%)

Query: 24  LVTGGTKGLGLAVVEELSMLGATVHT-CSRT--ETELNECIHHLQMKGLKVTGSVCDVSS 80
           L+TGG  GLGL V   L+  GA      SR             L+  G +V+   CDV+ 
Sbjct: 154 LITGGLGGLGLLVARWLAARGARHLVLLSRRGPAPRAAARAALLRAGGARVSVVRCDVTD 213

Query: 81  RPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLA 140
                 L+  +++   G L   ++  G        E     F+ V++     A +L +  
Sbjct: 214 PAALAALLAELAAG--GPLAGVIHAAGVLRDALLAELTPAAFAAVLAAKVAGALNLHE-- 269

Query: 141 HPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLA 181
             L         VL SS   ++       Y+A    ++ LA
Sbjct: 270 --LTPDLPLDFFVLFSSVAALLGGAGQAAYAAANAFLDALA 308

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consist of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthase uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 375

>gnl|CDD|181416 PRK08415, PRK08415, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 39.0 bits (91), Expect = 0.001
 Identities = 48/202 (23%), Positives = 90/202 (44%), Gaps = 21/202 (10%)

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVG----TSVLKPTLEYNAEDFSLVMSTNFE 131
            DVS     ++L  ++     GK++  V++V      ++    LE + E F++ M  +  
Sbjct: 62  LDVSKPEHFKSLAESLKKDL-GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVY 120

Query: 132 SAFHLCQLAHPLLRASGAASIVLMSSALG----IVSANVGTVYSATKGAMNQLAKNLACE 187
           S   L +   PLL    +   VL  S LG    +   NV  V    K A+    + LA +
Sbjct: 121 SLIELTRALLPLLNDGAS---VLTLSYLGGVKYVPHYNVMGV---AKAALESSVRYLAVD 174

Query: 188 WAKDNIRTNSVAPWYIRTPFTEPLLGNGKFV---DEVKSRTPMGRLGEPKEVSSLVAFLC 244
             K  IR N+++   I+T      +G+ + +   +E+ +  P+ +    +EV +   +L 
Sbjct: 175 LGKKGIRVNAISAGPIKT-LAASGIGDFRMILKWNEINA--PLKKNVSIEEVGNSGMYLL 231

Query: 245 MPAASYITGQTVCIDGGFTVNG 266
              +S +TG+   +D G+ + G
Sbjct: 232 SDLSSGVTGEIHYVDAGYNIMG 253

Length = 274

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score = 38.5 bits (90), Expect = 0.002
 Identities = 39/141 (27%), Positives = 59/141 (41%), Gaps = 7/141 (4%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L G TA+VTGG  GLGL     L+  GA V   +R      E +    + G++V     D
Sbjct: 24  LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREAL--AGIDGVEVVM--LD 79

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           ++     +            +++I +NN G  V+        + +    +TN    F L 
Sbjct: 80  LADLESVRAFAERFLDSGR-RIDILINNAG--VMACPETRVGDGWEAQFATNHLGHFALV 136

Query: 138 QLAHPLLRASGAASIVLMSSA 158
            L  P L A   A +V +SSA
Sbjct: 137 NLLWPALAAGAGARVVALSSA 157

Length = 315

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 38.4 bits (90), Expect = 0.003
 Identities = 41/187 (21%), Positives = 73/187 (39%), Gaps = 4/187 (2%)

Query: 19  QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDV 78
              T L+TG + G G A+ +     G  V    R+E    +      +   +    + DV
Sbjct: 3   SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFE---ALHPDRALARLLDV 59

Query: 79  SSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQ 138
           +       ++    + F G +++ VNN G        E    +       N   A  + +
Sbjct: 60  TDFDAIDAVVADAEATF-GPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTK 118

Query: 139 LAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSV 198
              P +RA     IV ++S  G+++      Y  +K A+  ++++LA E A   I   +V
Sbjct: 119 AVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALEGISESLAKEVAPFGIHVTAV 178

Query: 199 APWYIRT 205
            P   RT
Sbjct: 179 EPGSFRT 185

Length = 277

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	270
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
KOG0725	270	consensus Reductases with broad range of substrate	100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK08643	256	acetoin reductase; Validated	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	100.0
PRK06701	290	short chain dehydrogenase; Provisional	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
PRK12939	250	short chain dehydrogenase; Provisional	100.0
PRK07890	258	short chain dehydrogenase; Provisional	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	100.0
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
PRK05717	255	oxidoreductase; Validated	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	100.0
PRK06138	252	short chain dehydrogenase; Provisional	100.0
PRK08628	258	short chain dehydrogenase; Provisional	100.0
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	100.0
PRK08213	259	gluconate 5-dehydrogenase; Provisional	100.0
PRK06500	249	short chain dehydrogenase; Provisional	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
PRK12937	245	short chain dehydrogenase; Provisional	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
PRK12824	245	acetoacetyl-CoA reductase; Provisional	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
PRK12742	237	oxidoreductase; Provisional	100.0
PRK07069	251	short chain dehydrogenase; Validated	100.0
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05875	276	short chain dehydrogenase; Provisional	100.0
PRK12744	257	short chain dehydrogenase; Provisional	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
PRK12935	247	acetoacetyl-CoA reductase; Provisional	100.0
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	100.0
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK07774	250	short chain dehydrogenase; Provisional	100.0
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK06947	248	glucose-1-dehydrogenase; Provisional	100.0
PRK09186	256	flagellin modification protein A; Provisional	100.0
PRK06198	260	short chain dehydrogenase; Provisional	100.0
PRK06057	255	short chain dehydrogenase; Provisional	100.0
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06123	248	short chain dehydrogenase; Provisional	100.0
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	100.0
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	100.0
PRK12746	254	short chain dehydrogenase; Provisional	100.0
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK05884	223	short chain dehydrogenase; Provisional	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
PRK08703	239	short chain dehydrogenase; Provisional	100.0
PRK09134	258	short chain dehydrogenase; Provisional	100.0
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
PRK07060	245	short chain dehydrogenase; Provisional	100.0
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	100.0
PRK12827	249	short chain dehydrogenase; Provisional	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
PRK07074	257	short chain dehydrogenase; Provisional	100.0
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	100.0
PRK07577	234	short chain dehydrogenase; Provisional	100.0
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	100.0
PLN00015	308	protochlorophyllide reductase	100.0
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
PRK06182	273	short chain dehydrogenase; Validated	100.0
PRK07832	272	short chain dehydrogenase; Provisional	100.0
PRK08263	275	short chain dehydrogenase; Provisional	100.0
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05866	293	short chain dehydrogenase; Provisional	100.0
PRK12828	239	short chain dehydrogenase; Provisional	100.0
PRK12829	264	short chain dehydrogenase; Provisional	100.0
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	100.0
PRK05650	270	short chain dehydrogenase; Provisional	100.0
PRK07454	241	short chain dehydrogenase; Provisional	100.0
PRK07041	230	short chain dehydrogenase; Provisional	100.0
PRK05855	582	short chain dehydrogenase; Validated	100.0
PRK08324	681	short chain dehydrogenase; Validated	100.0
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	100.0
PRK07024	257	short chain dehydrogenase; Provisional	100.0
PRK09135	249	pteridine reductase; Provisional	100.0
PRK06180	277	short chain dehydrogenase; Provisional	100.0
PRK09072	263	short chain dehydrogenase; Provisional	100.0
PRK06194	287	hypothetical protein; Provisional	100.0
PRK05993	277	short chain dehydrogenase; Provisional	100.0
PLN02780	320	ketoreductase/ oxidoreductase	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	100.0
PRK09009	235	C factor cell-cell signaling protein; Provisional	100.0
PRK06914	280	short chain dehydrogenase; Provisional	100.0
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07806	248	short chain dehydrogenase; Provisional	100.0
PRK07775	274	short chain dehydrogenase; Provisional	100.0
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	100.0
PRK10538	248	malonic semialdehyde reductase; Provisional	100.0
PRK06924	251	short chain dehydrogenase; Provisional	100.0
COG1028	251	FabG Dehydrogenases with different specificities (	100.0
PRK05854	313	short chain dehydrogenase; Provisional	100.0
PRK06197	306	short chain dehydrogenase; Provisional	100.0
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	100.0
PRK06179	270	short chain dehydrogenase; Provisional	100.0
PRK07904	253	short chain dehydrogenase; Provisional	100.0
PRK08267	260	short chain dehydrogenase; Provisional	100.0
PRK08251	248	short chain dehydrogenase; Provisional	100.0
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06181	263	short chain dehydrogenase; Provisional	100.0
PRK07578	199	short chain dehydrogenase; Provisional	100.0
PRK07453	322	protochlorophyllide oxidoreductase; Validated	100.0
PRK07326	237	short chain dehydrogenase; Provisional	100.0
PRK06482	276	short chain dehydrogenase; Provisional	100.0
PRK07102	243	short chain dehydrogenase; Provisional	100.0
PRK07023	243	short chain dehydrogenase; Provisional	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	100.0
PRK07201	657	short chain dehydrogenase; Provisional	100.0
PRK05693	274	short chain dehydrogenase; Provisional	100.0
KOG1208	314	consensus Dehydrogenases with different specificit	100.0
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	100.0
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	100.0
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	100.0
PRK06101	240	short chain dehydrogenase; Provisional	100.0
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	100.0
KOG1611	249	consensus Predicted short chain-type dehydrogenase	100.0
PRK08264	238	short chain dehydrogenase; Validated	100.0
PRK09291	257	short chain dehydrogenase; Provisional	100.0
PRK08017	256	oxidoreductase; Provisional	100.0
PRK12367	245	short chain dehydrogenase; Provisional	99.97
PRK08177	225	short chain dehydrogenase; Provisional	99.97
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.97
PRK06953	222	short chain dehydrogenase; Provisional	99.97
PRK08219	227	short chain dehydrogenase; Provisional	99.97
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.97
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.96
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.94
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.93
PLN03209	576	translocon at the inner envelope of chloroplast su	99.92
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.92
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.92
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.9
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.9
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.89
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.88
PLN02653	340	GDP-mannose 4,6-dehydratase	99.87
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.87
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.86
PRK06720	169	hypothetical protein; Provisional	99.86
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.85
PLN02583	297	cinnamoyl-CoA reductase	99.85
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.85
PLN02572	442	UDP-sulfoquinovose synthase	99.85
PLN02650	351	dihydroflavonol-4-reductase	99.84
PLN02240	352	UDP-glucose 4-epimerase	99.84
PLN02214	342	cinnamoyl-CoA reductase	99.84
PLN00198	338	anthocyanidin reductase; Provisional	99.83
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.83
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.83
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.82
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.82
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.82
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.82
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.81
PLN02686	367	cinnamoyl-CoA reductase	99.8
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.79
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.79
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.79
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.79
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.78
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.77
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.76
PLN02427	386	UDP-apiose/xylose synthase	99.76
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.75
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.74
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.73
PLN02260	668	probable rhamnose biosynthetic enzyme	99.72
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.71
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.7
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	99.7
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.69
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.69
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.67
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.66
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.66
PLN02206	442	UDP-glucuronate decarboxylase	99.66
CHL00194	317	ycf39 Ycf39; Provisional	99.65
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.65
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.63
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.62
PRK07201	657	short chain dehydrogenase; Provisional	99.59
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.58
PLN02996	491	fatty acyl-CoA reductase	99.57
PRK05865	854	hypothetical protein; Provisional	99.56
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.56
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.5
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.5
PLN02778	298	3,5-epimerase/4-reductase	99.47
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.44
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.44
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.42
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.42
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.35
PLN00016	378	RNA-binding protein; Provisional	99.35
PRK12320	699	hypothetical protein; Provisional	99.34
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.34
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.33
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.31
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.31
PRK08309	177	short chain dehydrogenase; Provisional	99.3
PLN02260	668	probable rhamnose biosynthetic enzyme	99.24
PLN02503	605	fatty acyl-CoA reductase 2	99.24
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.21
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.11
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.1
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.09
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.07
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.04
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.86
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.78
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.75
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.75
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.74
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.69
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.68
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.63
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.53
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.45
PLN00106	323	malate dehydrogenase	98.41
COG2910	211	Putative NADH-flavin reductase [General function p	98.39
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.38
PRK09620	229	hypothetical protein; Provisional	98.32
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.3
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.26
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	98.26
PRK14982	340	acyl-ACP reductase; Provisional	98.23
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.2
PTZ00325	321	malate dehydrogenase; Provisional	98.19
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.08
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.97
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.91
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.89
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	97.88
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.87
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.85
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.85
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	97.82
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	97.76
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.75
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.75
KOG2774	366	consensus NAD dependent epimerase [General functio	97.74
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.72
PRK06849	389	hypothetical protein; Provisional	97.62
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.55
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.55
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.53
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.52
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.52
PRK05086	312	malate dehydrogenase; Provisional	97.51
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.5
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.42
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.36
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.35
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.35
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.32
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.31
COG3268	382	Uncharacterized conserved protein [Function unknow	97.3
PRK15116	268	sulfur acceptor protein CsdL; Provisional	97.27
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	97.26
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.26
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.26
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.23
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.2
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	97.19
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	97.18
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	97.15
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	97.15
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.11
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.1
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	97.1
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	97.08
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	97.08
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	97.07
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.06
COG2130	340	Putative NADP-dependent oxidoreductases [General f	97.05
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	97.05
PRK08306	296	dipicolinate synthase subunit A; Reviewed	97.05
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	97.02
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	97.01
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.99
PRK14968	188	putative methyltransferase; Provisional	96.98
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.97
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	96.96
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	96.95
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.95
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	96.94
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	96.93
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	96.92
PRK04148	134	hypothetical protein; Provisional	96.91
PLN00203	519	glutamyl-tRNA reductase	96.91
PTZ00117	319	malate dehydrogenase; Provisional	96.89
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.88
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.88
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.87
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.85
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.84
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.8
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.8
PRK09496	453	trkA potassium transporter peripheral membrane com	96.79
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	96.76
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.75
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.74
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.73
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.7
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.69
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.67
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.6
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	96.59
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.59
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	96.58
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.58
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.56
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.56
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	96.55
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.51
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.5
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	96.48
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	96.46
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.44
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.42
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.4
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.39
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.39
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	96.37
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.36
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.36
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	96.35
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	96.32
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.3
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.26
PTZ00082	321	L-lactate dehydrogenase; Provisional	96.25
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	96.22
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	96.2
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.18
PLN02602	350	lactate dehydrogenase	96.18
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.17
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	96.16
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.16
PLN00112	444	malate dehydrogenase (NADP); Provisional	96.16
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	96.15
PTZ00075	476	Adenosylhomocysteinase; Provisional	96.12
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	96.1
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.1
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	96.1
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	96.08
PRK12480	330	D-lactate dehydrogenase; Provisional	96.05
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	96.04
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.04
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	96.04
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	96.03
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	96.03
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.01
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	95.98
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	95.97
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	95.96
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.96
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	95.95
PRK09496	453	trkA potassium transporter peripheral membrane com	95.94
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	95.93
PRK08223	287	hypothetical protein; Validated	95.93
PRK14180	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.93
PRK14173	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.9
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	95.9
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	95.9
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.89
PRK14177	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.89
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.88
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.88
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	95.87
PRK14183	281	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.86
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	95.86
PRK14172	278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.85
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	95.84
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	95.83
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	95.83
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	95.83
PRK13243	333	glyoxylate reductase; Reviewed	95.82
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	95.81
PRK14170	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.79
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	95.79
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	95.75
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	95.74
PLN02740	381	Alcohol dehydrogenase-like	95.74
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	95.73
PLN02928	347	oxidoreductase family protein	95.72
PRK14169	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.71
COG1648	210	CysG Siroheme synthase (precorrin-2 oxidase/ferroc	95.7
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	95.69
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	95.67
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	95.66
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	95.66
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	95.66
PRK14171	288	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.65
PRK05442	326	malate dehydrogenase; Provisional	95.64
PRK14186	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.63
PLN02494	477	adenosylhomocysteinase	95.62
PRK14166	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.62
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	95.62
PTZ00354	334	alcohol dehydrogenase; Provisional	95.61
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	95.6
PRK08655	437	prephenate dehydrogenase; Provisional	95.6
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	95.6
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	95.54
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	95.53
PRK07877	722	hypothetical protein; Provisional	95.53
PLN02586	360	probable cinnamyl alcohol dehydrogenase	95.52
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	95.51
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	95.51
PRK06223	307	malate dehydrogenase; Reviewed	95.49
PLN02178	375	cinnamyl-alcohol dehydrogenase	95.48
PRK14187	294	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.47
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	95.46
cd01076	227	NAD_bind_1_Glu_DH NAD(P) binding domain of glutama	95.46
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	95.45

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=100.00  E-value=9.9e-51  Score=314.91  Aligned_cols=244  Identities=32%  Similarity=0.454  Sum_probs=227.8

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      .++.|+++||||++|||++++..|+++|++|++.+++....++....+... .+...+.||++++++++..+++..+.+ 
T Consensus        11 r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~-~~h~aF~~DVS~a~~v~~~l~e~~k~~-   88 (256)
T KOG1200|consen   11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGY-GDHSAFSCDVSKAHDVQNTLEEMEKSL-   88 (256)
T ss_pred             HHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCC-CccceeeeccCcHHHHHHHHHHHHHhc-
Confidence            567799999999999999999999999999999999999888888888665 367778999999999999999999999 


Q ss_pred             CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHH--HhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLL--RASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m--~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                      ++++++|||||+..+..+..+..++|++.+.+|+.|.|.++|++...|  .++++++|||+||+-+..+.-++.-|+++|
T Consensus        89 g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAAsK  168 (256)
T KOG1200|consen   89 GTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAASK  168 (256)
T ss_pred             CCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhhhhc
Confidence            799999999999999999999999999999999999999999999984  344455999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCc
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ  254 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  254 (270)
                      +.+.+|+|++|+|++++|||||+|.||++.|||+...  .++..+++...+|++|++++||+|+.+.||+|+.++|+||+
T Consensus       169 ~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~m--p~~v~~ki~~~iPmgr~G~~EevA~~V~fLAS~~ssYiTG~  246 (256)
T KOG1200|consen  169 GGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAM--PPKVLDKILGMIPMGRLGEAEEVANLVLFLASDASSYITGT  246 (256)
T ss_pred             CceeeeeHHHHHHHhhcCceEeEeccccccChhhhhc--CHHHHHHHHccCCccccCCHHHHHHHHHHHhccccccccce
Confidence            9999999999999999999999999999999999876  56778889999999999999999999999999999999999


Q ss_pred             EEeecCCccc
Q 024230          255 TVCIDGGFTV  264 (270)
Q Consensus       255 ~i~vdgG~~~  264 (270)
                      .+.|+||+.+
T Consensus       247 t~evtGGl~m  256 (256)
T KOG1200|consen  247 TLEVTGGLAM  256 (256)
T ss_pred             eEEEeccccC
Confidence            9999999864

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.8e-49  Score=333.80  Aligned_cols=248  Identities=27%  Similarity=0.353  Sum_probs=222.8

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhc-CCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK-GLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      ++|+||+++|||+++|||+++|++|+++|++|++++|+++.+++..+++... +.++.++.+|++|+++++++++++. .
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~-~   82 (263)
T PRK08339          4 IDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK-N   82 (263)
T ss_pred             cCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH-h
Confidence            4689999999999999999999999999999999999999888887777653 5578899999999999999999986 4


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                      + +++|++|||+|.....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.+....|+++|
T Consensus        83 ~-g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~~~y~asK  161 (263)
T PRK08339         83 I-GEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVR  161 (263)
T ss_pred             h-CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcchhhHHHH
Confidence            6 799999999998777788899999999999999999999999999999988889999999999999989999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC---------ChhhHHHHhhcCCCCCCCChHhHHHHHHHHhC
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG---------NGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCM  245 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (270)
                      +|+++|+|+++.|++++|||||+|+||+++|+|......         .+...+.+....|.+++.+|+|+++++.||++
T Consensus       162 aal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~s  241 (263)
T PRK08339        162 ISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGYLVAFLAS  241 (263)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCcccCcCHHHHHHHHHHHhc
Confidence            999999999999999999999999999999997643211         12233445566788999999999999999999


Q ss_pred             CCCCCccCcEEeecCCcccc
Q 024230          246 PAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       246 ~~~~~~~G~~i~vdgG~~~~  265 (270)
                      +.+.++||+++.+|||+.+.
T Consensus       242 ~~~~~itG~~~~vdgG~~~~  261 (263)
T PRK08339        242 DLGSYINGAMIPVDGGRLNS  261 (263)
T ss_pred             chhcCccCceEEECCCcccc
Confidence            99999999999999999765

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=4.5e-48  Score=327.29  Aligned_cols=245  Identities=27%  Similarity=0.435  Sum_probs=219.8

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      ++++||+++||||++|||+++|++|+++|++|++++|++.  ++..+.++..+.++.++.+|++++++++++++++.+.+
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (251)
T PRK12481          4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVM   81 (251)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHc
Confidence            5789999999999999999999999999999999988653  34445555567789999999999999999999999988


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCccccccCCCChhhhhhH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                       +++|++|||||.....++.+.++++|++++++|+.+++.++++++|+|.+++ .|+||++||..+..+.+....|++||
T Consensus        82 -g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK  160 (251)
T PRK12481         82 -GHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASK  160 (251)
T ss_pred             -CCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHHHH
Confidence             7999999999998778888999999999999999999999999999998765 58999999999999888889999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCc
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ  254 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  254 (270)
                      +|+++|+++++.|++++||+|+.|+||+++|++...+.......+......|.+++.+|+|+++++.||+++.+.+++|+
T Consensus       161 ~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~peeva~~~~~L~s~~~~~~~G~  240 (251)
T PRK12481        161 SAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERIPASRWGTPDDLAGPAIFLSSSASDYVTGY  240 (251)
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcCCc
Confidence            99999999999999999999999999999999876653333333455567788999999999999999999999999999


Q ss_pred             EEeecCCcc
Q 024230          255 TVCIDGGFT  263 (270)
Q Consensus       255 ~i~vdgG~~  263 (270)
                      ++.+|||+.
T Consensus       241 ~i~vdgg~~  249 (251)
T PRK12481        241 TLAVDGGWL  249 (251)
T ss_pred             eEEECCCEe
Confidence            999999975

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.9e-48  Score=326.83  Aligned_cols=252  Identities=27%  Similarity=0.412  Sum_probs=227.3

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHh--cCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQM--KGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      .+++||+++|||+++|||++++++|+++|++|++++|+++.+++..+++..  .+.++.++.+|++++++++++++++.+
T Consensus         3 ~~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   82 (260)
T PRK07063          3 NRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEE   82 (260)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999999998888888876  456788999999999999999999999


Q ss_pred             HcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhh
Q 024230           94 LFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                      .+ +++|++|||||.....++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++|
T Consensus        83 ~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  161 (260)
T PRK07063         83 AF-GPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVA  161 (260)
T ss_pred             Hh-CCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCchHHHHH
Confidence            98 79999999999877677778899999999999999999999999999988877899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC---Ch-hhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCC
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG---NG-KFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAAS  249 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  249 (270)
                      |+|+++|+++++.|++++||+|++|+||+++|++...+..   .+ ..........|.+++.+|+|+++.++||+++.++
T Consensus       162 Kaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~va~~~~fl~s~~~~  241 (260)
T PRK07063        162 KHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAMTAVFLASDEAP  241 (260)
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccc
Confidence            9999999999999999999999999999999998754321   11 1223344567889999999999999999999999


Q ss_pred             CccCcEEeecCCccccccc
Q 024230          250 YITGQTVCIDGGFTVNGFF  268 (270)
Q Consensus       250 ~~~G~~i~vdgG~~~~~~~  268 (270)
                      ++||+++.+|||++..+.|
T Consensus       242 ~itG~~i~vdgg~~~~~~~  260 (260)
T PRK07063        242 FINATCITIDGGRSVLYHD  260 (260)
T ss_pred             ccCCcEEEECCCeeeeccC
Confidence            9999999999999988865

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=4.4e-48  Score=328.62  Aligned_cols=249  Identities=26%  Similarity=0.350  Sum_probs=217.4

Q ss_pred             CCCCCCEEEEecCC--CcHHHHHHHHHHHCCCeEEEeeCChh--HHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGT--KGLGLAVVEELSMLGATVHTCSRTET--ELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTV   91 (270)
Q Consensus        16 ~~l~gk~vlItG~s--~giG~~la~~l~~~G~~v~l~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i   91 (270)
                      ++++||+++|||++  +|||+++|++|+++|++|+++.|+.+  +.++..+++.+.+.++.++.+|++|+++++++++++
T Consensus         2 ~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~   81 (258)
T PRK07370          2 LDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETI   81 (258)
T ss_pred             cccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHH
Confidence            56899999999986  89999999999999999998876543  334555556555456778999999999999999999


Q ss_pred             HHHcCCcccEEEECCCCCC----CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCC
Q 024230           92 SSLFNGKLNIFVNNVGTSV----LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG  167 (270)
Q Consensus        92 ~~~~~~~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~  167 (270)
                      .+.+ +++|++|||||...    ..++.+.+.++|++++++|+.+++.++++++|+|++  .|+||++||..+..+.+++
T Consensus        82 ~~~~-g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~  158 (258)
T PRK07370         82 KQKW-GKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE--GGSIVTLTYLGGVRAIPNY  158 (258)
T ss_pred             HHHc-CCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh--CCeEEEEeccccccCCccc
Confidence            9988 79999999999754    357788999999999999999999999999999975  4899999999999888999


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCC
Q 024230          168 TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA  247 (270)
Q Consensus       168 ~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (270)
                      ..|++||+|+++|+++|+.|++++||+|++|+||+++|++...+...+...+.+....|.+++.+|+|+++++.||+++.
T Consensus       159 ~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~fl~s~~  238 (258)
T PRK07370        159 NVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAPLRRTVTQTEVGNTAAFLLSDL  238 (258)
T ss_pred             chhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhhhcCCcCcCCCHHHHHHHHHHHhChh
Confidence            99999999999999999999999999999999999999987544222233444555678899999999999999999999


Q ss_pred             CCCccCcEEeecCCcccccc
Q 024230          248 ASYITGQTVCIDGGFTVNGF  267 (270)
Q Consensus       248 ~~~~~G~~i~vdgG~~~~~~  267 (270)
                      ++++||+++.+|||+++.++
T Consensus       239 ~~~~tG~~i~vdgg~~~~~~  258 (258)
T PRK07370        239 ASGITGQTIYVDAGYCIMGM  258 (258)
T ss_pred             hccccCcEEEECCcccccCC
Confidence            99999999999999998775

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.4e-48  Score=331.16  Aligned_cols=247  Identities=21%  Similarity=0.251  Sum_probs=210.2

Q ss_pred             CCCCCCEEEEecCC--CcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHH-HhcCCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGT--KGLGLAVVEELSMLGATVHTCSRTETELNECIHHL-QMKGLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        16 ~~l~gk~vlItG~s--~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      |.|+||+++||||+  +|||+++|+.|+++|++|++++|+++.. +..+++ ++.+.. .++.+|++|.++++++++++.
T Consensus         1 ~~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~-~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~   78 (274)
T PRK08415          1 MIMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALK-KRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLK   78 (274)
T ss_pred             CccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHH-HHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHH
Confidence            56789999999997  8999999999999999999999986422 222333 222334 678999999999999999999


Q ss_pred             HHcCCcccEEEECCCCCC----CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCCh
Q 024230           93 SLFNGKLNIFVNNVGTSV----LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGT  168 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~  168 (270)
                      +.+ +++|++|||||...    ..++.+.+.++|++++++|+.+++.+++.++|+|.+  .|+||++||..+..+.+.+.
T Consensus        79 ~~~-g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~--~g~Iv~isS~~~~~~~~~~~  155 (274)
T PRK08415         79 KDL-GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND--GASVLTLSYLGGVKYVPHYN  155 (274)
T ss_pred             HHc-CCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc--CCcEEEEecCCCccCCCcch
Confidence            988 89999999999864    257788999999999999999999999999999965  47999999999988888889


Q ss_pred             hhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCC
Q 024230          169 VYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAA  248 (270)
Q Consensus       169 ~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  248 (270)
                      .|++||+|+++|+|+++.|++++||+|++|+||+++|++..................|.++..+|+|++++++||+++.+
T Consensus       156 ~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~r~~~pedva~~v~fL~s~~~  235 (274)
T PRK08415        156 VMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEINAPLKKNVSIEEVGNSGMYLLSDLS  235 (274)
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhhhhhCchhccCCHHHHHHHHHHHhhhhh
Confidence            99999999999999999999999999999999999998765432111111222345688899999999999999999999


Q ss_pred             CCccCcEEeecCCcccccc
Q 024230          249 SYITGQTVCIDGGFTVNGF  267 (270)
Q Consensus       249 ~~~~G~~i~vdgG~~~~~~  267 (270)
                      .++||+++.+|||+.+.++
T Consensus       236 ~~itG~~i~vdGG~~~~~~  254 (274)
T PRK08415        236 SGVTGEIHYVDAGYNIMGM  254 (274)
T ss_pred             hcccccEEEEcCcccccCC
Confidence            9999999999999986554

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6.3e-48  Score=326.57  Aligned_cols=243  Identities=21%  Similarity=0.266  Sum_probs=213.8

Q ss_pred             CCCCCCEEEEecCC--CcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGT--KGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        16 ~~l~gk~vlItG~s--~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      ..|+||+++||||+  +|||+++|++|+++|++|++++|++ +.++..+++.  +.++.++.+|++++++++++++++.+
T Consensus         3 ~~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~   79 (252)
T PRK06079          3 GILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV--DEEDLLVECDVASDESIERAFATIKE   79 (252)
T ss_pred             cccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc--cCceeEEeCCCCCHHHHHHHHHHHHH
Confidence            45889999999999  8999999999999999999999984 3333334442  24678899999999999999999999


Q ss_pred             HcCCcccEEEECCCCCCC----CCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChh
Q 024230           94 LFNGKLNIFVNNVGTSVL----KPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTV  169 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~  169 (270)
                      .+ +++|++|||||....    .++.+.+.++|++.+++|+.+++.+++.++|+|.+  .|+||+++|..+..+.+.+..
T Consensus        80 ~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~~~~~~  156 (252)
T PRK06079         80 RV-GKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP--GASIVTLTYFGSERAIPNYNV  156 (252)
T ss_pred             Hh-CCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc--CceEEEEeccCccccCCcchh
Confidence            88 799999999998643    67788999999999999999999999999999964  489999999999888889999


Q ss_pred             hhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCC
Q 024230          170 YSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAAS  249 (270)
Q Consensus       170 y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  249 (270)
                      |++||+|+++|+|+++.|++++||+|++|+||+++|++...+...++..+......|.+++.+|+|+++++.||+++.++
T Consensus       157 Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~l~s~~~~  236 (252)
T PRK06079        157 MGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVDGVGVTIEEVGNTAAFLLSDLST  236 (252)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhcCcccCCCCHHHHHHHHHHHhCcccc
Confidence            99999999999999999999999999999999999998755433334444556677889999999999999999999999


Q ss_pred             CccCcEEeecCCccc
Q 024230          250 YITGQTVCIDGGFTV  264 (270)
Q Consensus       250 ~~~G~~i~vdgG~~~  264 (270)
                      +++|+++.+|||+++
T Consensus       237 ~itG~~i~vdgg~~~  251 (252)
T PRK06079        237 GVTGDIIYVDKGVHL  251 (252)
T ss_pred             cccccEEEeCCceec
Confidence            999999999999764

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.1e-47  Score=328.42  Aligned_cols=247  Identities=19%  Similarity=0.231  Sum_probs=211.0

Q ss_pred             CCCCCEEEEecCCC--cHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           17 SLQGMTALVTGGTK--GLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        17 ~l~gk~vlItG~s~--giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .|+||++|||||++  |||+++|++|+++|++|++++|+++..++..+..++.+. ..++.+|++|.++++++++++.+.
T Consensus         4 ~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~-~~~~~~Dv~d~~~v~~~~~~~~~~   82 (271)
T PRK06505          4 LMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGS-DFVLPCDVEDIASVDAVFEALEKK   82 (271)
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCC-ceEEeCCCCCHHHHHHHHHHHHHH
Confidence            37899999999997  999999999999999999999986543333322222232 357899999999999999999999


Q ss_pred             cCCcccEEEECCCCCCC----CCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhh
Q 024230           95 FNGKLNIFVNNVGTSVL----KPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVY  170 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y  170 (270)
                      + +++|++|||||....    .++.+.+.++|++++++|+.+++.++++++|+|.+  .|+||+++|..+..+.+.+..|
T Consensus        83 ~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y  159 (271)
T PRK06505         83 W-GKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD--GGSMLTLTYGGSTRVMPNYNVM  159 (271)
T ss_pred             h-CCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc--CceEEEEcCCCccccCCccchh
Confidence            8 899999999998643    46778999999999999999999999999999974  4899999999998888899999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCC
Q 024230          171 SATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY  250 (270)
Q Consensus       171 ~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  250 (270)
                      ++||+|+.+|+|+|+.|++++|||||+|+||+++|++...+.......+......|.+++.+|+|++++++||+++.+++
T Consensus       160 ~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peeva~~~~fL~s~~~~~  239 (271)
T PRK06505        160 GVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPLRRTVTIDEVGGSALYLLSDLSSG  239 (271)
T ss_pred             hhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhcCCccccCCHHHHHHHHHHHhCccccc
Confidence            99999999999999999999999999999999999986543221122233344568889999999999999999999999


Q ss_pred             ccCcEEeecCCcccccc
Q 024230          251 ITGQTVCIDGGFTVNGF  267 (270)
Q Consensus       251 ~~G~~i~vdgG~~~~~~  267 (270)
                      +||+++.+|||+.+..+
T Consensus       240 itG~~i~vdgG~~~~~~  256 (271)
T PRK06505        240 VTGEIHFVDSGYNIVSM  256 (271)
T ss_pred             cCceEEeecCCcccCCc
Confidence            99999999999876554

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.4e-47  Score=325.45  Aligned_cols=250  Identities=22%  Similarity=0.321  Sum_probs=215.5

Q ss_pred             cccCCCCCCEEEEecCC--CcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Q 024230           13 QNRWSLQGMTALVTGGT--KGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINT   90 (270)
Q Consensus        13 ~~~~~l~gk~vlItG~s--~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   90 (270)
                      ++.++++||+++||||+  +|||+++|++|+++|++|++++|+++..+. .+++.+....+.++.+|++|++++++++++
T Consensus         3 ~~~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   81 (258)
T PRK07533          3 QPLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPY-VEPLAEELDAPIFLPLDVREPGQLEAVFAR   81 (258)
T ss_pred             CcccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHH-HHHHHHhhccceEEecCcCCHHHHHHHHHH
Confidence            55678999999999998  599999999999999999999998654322 222222212356789999999999999999


Q ss_pred             HHHHcCCcccEEEECCCCCCC----CCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCC
Q 024230           91 VSSLFNGKLNIFVNNVGTSVL----KPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANV  166 (270)
Q Consensus        91 i~~~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~  166 (270)
                      +.+.+ +++|++|||||....    .++.+.+.++|++++++|+.+++.+++.++|+|++  .|+||++||..+..+.+.
T Consensus        82 ~~~~~-g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~--~g~Ii~iss~~~~~~~~~  158 (258)
T PRK07533         82 IAEEW-GRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN--GGSLLTMSYYGAEKVVEN  158 (258)
T ss_pred             HHHHc-CCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc--CCEEEEEeccccccCCcc
Confidence            99988 899999999998642    56778999999999999999999999999999954  489999999999888888


Q ss_pred             ChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCC
Q 024230          167 GTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP  246 (270)
Q Consensus       167 ~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (270)
                      +..|++||+|+++|+++++.|++++||+|++|+||+++|+|...+...+...+......|.+++.+|+|+++.++||+++
T Consensus       159 ~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~L~s~  238 (258)
T PRK07533        159 YNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPLRRLVDIDDVGAVAAFLASD  238 (258)
T ss_pred             chhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCh
Confidence            99999999999999999999999999999999999999998765433333344555677889999999999999999999


Q ss_pred             CCCCccCcEEeecCCccccc
Q 024230          247 AASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       247 ~~~~~~G~~i~vdgG~~~~~  266 (270)
                      .++++||+.+.+|||+++++
T Consensus       239 ~~~~itG~~i~vdgg~~~~~  258 (258)
T PRK07533        239 AARRLTGNTLYIDGGYHIVG  258 (258)
T ss_pred             hhccccCcEEeeCCcccccC
Confidence            99999999999999998764

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.8e-47  Score=324.02  Aligned_cols=247  Identities=19%  Similarity=0.234  Sum_probs=211.8

Q ss_pred             CCCCCCEEEEecCCC--cHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTK--GLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        16 ~~l~gk~vlItG~s~--giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      -.++||+++||||++  |||+++|+.|+++|++|++++|+++ .++..+++....+...++.+|++|+++++++++++.+
T Consensus         4 ~~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~-~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~   82 (260)
T PRK06603          4 GLLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEV-LEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKE   82 (260)
T ss_pred             cccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchH-HHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHH
Confidence            357899999999998  9999999999999999999998743 3344444443312234678999999999999999999


Q ss_pred             HcCCcccEEEECCCCCC----CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChh
Q 024230           94 LFNGKLNIFVNNVGTSV----LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTV  169 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~  169 (270)
                      .+ +++|++|||+|...    ..++.+.+.++|++++++|+.+++.+++.+.|+|.+  +|+||+++|..+..+.+++..
T Consensus        83 ~~-g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~  159 (260)
T PRK06603         83 KW-GSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD--GGSIVTLTYYGAEKVIPNYNV  159 (260)
T ss_pred             Hc-CCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc--CceEEEEecCccccCCCcccc
Confidence            88 79999999999754    246778999999999999999999999999999964  489999999999888888999


Q ss_pred             hhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCC
Q 024230          170 YSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAAS  249 (270)
Q Consensus       170 y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  249 (270)
                      |++||+|+++|+++++.|++++||+||+|+||+++|++...........+......|++++..|+|+++++.||+++.++
T Consensus       160 Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~~~  239 (260)
T PRK06603        160 MGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPLKRNTTQEDVGGAAVYLFSELSK  239 (260)
T ss_pred             hhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCcccc
Confidence            99999999999999999999999999999999999998654322222334455567889999999999999999999999


Q ss_pred             CccCcEEeecCCccccc
Q 024230          250 YITGQTVCIDGGFTVNG  266 (270)
Q Consensus       250 ~~~G~~i~vdgG~~~~~  266 (270)
                      ++||+++.+|||+.+.+
T Consensus       240 ~itG~~i~vdgG~~~~~  256 (260)
T PRK06603        240 GVTGEIHYVDCGYNIMG  256 (260)
T ss_pred             cCcceEEEeCCcccccC
Confidence            99999999999998764

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.6e-47  Score=320.88  Aligned_cols=251  Identities=27%  Similarity=0.418  Sum_probs=226.2

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      +|++++|+++||||++|||++++++|+++|++|++++|++++++++.+++...+.++.++.+|++++++++++++++.+.
T Consensus         1 ~~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (254)
T PRK07478          1 MMRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVER   80 (254)
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            36789999999999999999999999999999999999999988888888877778999999999999999999999998


Q ss_pred             cCCcccEEEECCCCCC-CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccc-ccCCCChhhhh
Q 024230           95 FNGKLNIFVNNVGTSV-LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGI-VSANVGTVYSA  172 (270)
Q Consensus        95 ~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~-~~~~~~~~y~~  172 (270)
                      + +++|++|||||... ..++.+.+.++|++++++|+.+++.++++++|.|.+++.++||++||..+. .+.+....|++
T Consensus        81 ~-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~  159 (254)
T PRK07478         81 F-GGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAA  159 (254)
T ss_pred             c-CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCCcchhHH
Confidence            8 79999999999864 467788999999999999999999999999999998888899999999887 56788899999


Q ss_pred             hHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCcc
Q 024230          173 TKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT  252 (270)
Q Consensus       173 sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  252 (270)
                      ||+++++++++++.|+.++||+|++|+||+++|+|.+.+...+..........+.+++.+|+|+++.++||+++.+.+++
T Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~  239 (254)
T PRK07478        160 SKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHALKRMAQPEEIAQAALFLASDAASFVT  239 (254)
T ss_pred             HHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCC
Confidence            99999999999999999999999999999999998776543333333445556788899999999999999999899999


Q ss_pred             CcEEeecCCccccc
Q 024230          253 GQTVCIDGGFTVNG  266 (270)
Q Consensus       253 G~~i~vdgG~~~~~  266 (270)
                      |+++.+|||+++..
T Consensus       240 G~~~~~dgg~~~~~  253 (254)
T PRK07478        240 GTALLVDGGVSITR  253 (254)
T ss_pred             CCeEEeCCchhccC
Confidence            99999999988654

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.2e-47  Score=320.96  Aligned_cols=246  Identities=33%  Similarity=0.514  Sum_probs=220.8

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .++++||+++|||+++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++++++++++++++.+.
T Consensus         4 ~~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (253)
T PRK05867          4 LFDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAE   83 (253)
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999999988888888877778889999999999999999999998


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCccccccC-C-CChhhh
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIVSA-N-VGTVYS  171 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~~~~~~-~-~~~~y~  171 (270)
                      + +++|++|||||.....++.+.+.++|++.+++|+.+++.+++++.|+|.+++ .++||++||..+.... + ....|+
T Consensus        84 ~-g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y~  162 (253)
T PRK05867         84 L-GGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYC  162 (253)
T ss_pred             h-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccchH
Confidence            8 7999999999998778888899999999999999999999999999997764 5789999998876533 3 457899


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCc
Q 024230          172 ATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI  251 (270)
Q Consensus       172 ~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  251 (270)
                      +||+|+++|+++++.|++++||+|++|+||+++|++.....   ...+......|.+++.+|+|++++++||+++.++++
T Consensus       163 asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~---~~~~~~~~~~~~~r~~~p~~va~~~~~L~s~~~~~~  239 (253)
T PRK05867        163 ASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYT---EYQPLWEPKIPLGRLGRPEELAGLYLYLASEASSYM  239 (253)
T ss_pred             HHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccch---HHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCc
Confidence            99999999999999999999999999999999999875432   223344556788999999999999999999999999


Q ss_pred             cCcEEeecCCccc
Q 024230          252 TGQTVCIDGGFTV  264 (270)
Q Consensus       252 ~G~~i~vdgG~~~  264 (270)
                      ||+++.+|||++.
T Consensus       240 tG~~i~vdgG~~~  252 (253)
T PRK05867        240 TGSDIVIDGGYTC  252 (253)
T ss_pred             CCCeEEECCCccC
Confidence            9999999999864

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.6e-47  Score=323.55  Aligned_cols=248  Identities=22%  Similarity=0.278  Sum_probs=212.9

Q ss_pred             CCCCCEEEEecC--CCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           17 SLQGMTALVTGG--TKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        17 ~l~gk~vlItG~--s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .++||+++||||  ++|||+++|+.|+++|++|++++|++. .++..+++.........+++|++|+++++++++++.++
T Consensus         3 ~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (261)
T PRK08690          3 FLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDK-LEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKH   81 (261)
T ss_pred             ccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHH-HHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHH
Confidence            378999999997  679999999999999999999988643 33444444433234567899999999999999999998


Q ss_pred             cCCcccEEEECCCCCCCC----C-CCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChh
Q 024230           95 FNGKLNIFVNNVGTSVLK----P-TLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTV  169 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~----~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~  169 (270)
                      + +++|++|||||.....    + +.+.+.++|++++++|+.+++.+++++.|+|+++ .|+||++||..+..+.+++..
T Consensus        82 ~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~-~g~Iv~iss~~~~~~~~~~~~  159 (261)
T PRK08690         82 W-DGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR-NSAIVALSYLGAVRAIPNYNV  159 (261)
T ss_pred             h-CCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc-CcEEEEEcccccccCCCCccc
Confidence            8 8999999999986532    2 3567889999999999999999999999999755 489999999999888899999


Q ss_pred             hhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCC
Q 024230          170 YSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAAS  249 (270)
Q Consensus       170 y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  249 (270)
                      |++||+|+++|+|+++.|++++||||++|+||+++|++...+...+...+.+....|++|+.+|+|+++++.||+++.++
T Consensus       160 Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~l~s~~~~  239 (261)
T PRK08690        160 MGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLRRNVTIEEVGNTAAFLLSDLSS  239 (261)
T ss_pred             chhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCcccC
Confidence            99999999999999999999999999999999999998765533333344455667899999999999999999999999


Q ss_pred             CccCcEEeecCCcccccc
Q 024230          250 YITGQTVCIDGGFTVNGF  267 (270)
Q Consensus       250 ~~~G~~i~vdgG~~~~~~  267 (270)
                      ++||+++.+|||+.+..+
T Consensus       240 ~~tG~~i~vdgG~~~~~~  257 (261)
T PRK08690        240 GITGEITYVDGGYSINAL  257 (261)
T ss_pred             CcceeEEEEcCCcccccc
Confidence            999999999999987654

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=7e-47  Score=321.04  Aligned_cols=245  Identities=24%  Similarity=0.300  Sum_probs=211.7

Q ss_pred             cCCCCCCEEEEecCC--CcHHHHHHHHHHHCCCeEEEeeCCh---hHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGT--KGLGLAVVEELSMLGATVHTCSRTE---TELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLIN   89 (270)
Q Consensus        15 ~~~l~gk~vlItG~s--~giG~~la~~l~~~G~~v~l~~r~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   89 (270)
                      +++++||+++||||+  +|||+++|++|+++|++|++++|+.   +.++++.++++  +.++.++.+|++|+++++++++
T Consensus         2 ~~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~   79 (257)
T PRK08594          2 MLSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE--GQESLLLPCDVTSDEEITACFE   79 (257)
T ss_pred             ccccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC--CCceEEEecCCCCHHHHHHHHH
Confidence            457899999999997  8999999999999999999998754   33344433332  4578889999999999999999


Q ss_pred             HHHHHcCCcccEEEECCCCCC----CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCC
Q 024230           90 TVSSLFNGKLNIFVNNVGTSV----LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSAN  165 (270)
Q Consensus        90 ~i~~~~~~~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~  165 (270)
                      ++.+.+ +++|++|||||...    ..++.+.+.++|.+.+++|+.+++.++++++|+|.+  .|+||++||..+..+.+
T Consensus        80 ~~~~~~-g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~isS~~~~~~~~  156 (257)
T PRK08594         80 TIKEEV-GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE--GGSIVTLTYLGGERVVQ  156 (257)
T ss_pred             HHHHhC-CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc--CceEEEEcccCCccCCC
Confidence            999988 89999999999764    256778999999999999999999999999999964  48999999999998888


Q ss_pred             CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhC
Q 024230          166 VGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCM  245 (270)
Q Consensus       166 ~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (270)
                      .+..|++||+|+++|+|+++.|++++|||||+|+||+++|++...........+......|.++..+|+|+++.++||++
T Consensus       157 ~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~l~s  236 (257)
T PRK08594        157 NYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERAPLRRTTTQEEVGDTAAFLFS  236 (257)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHhhcCCccccCCHHHHHHHHHHHcC
Confidence            89999999999999999999999999999999999999999764432222223334556688899999999999999999


Q ss_pred             CCCCCccCcEEeecCCccc
Q 024230          246 PAASYITGQTVCIDGGFTV  264 (270)
Q Consensus       246 ~~~~~~~G~~i~vdgG~~~  264 (270)
                      +.++++||+++.+|||+++
T Consensus       237 ~~~~~~tG~~~~~dgg~~~  255 (257)
T PRK08594        237 DLSRGVTGENIHVDSGYHI  255 (257)
T ss_pred             cccccccceEEEECCchhc
Confidence            9999999999999999875

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-46  Score=316.35  Aligned_cols=248  Identities=29%  Similarity=0.456  Sum_probs=221.4

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChh-HHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTET-ELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      .+++++|+++|||+++|||+++|++|+++|++|++++|+.+ .+++..++++..+.++.++.+|++++++++++++++.+
T Consensus         3 ~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   82 (254)
T PRK06114          3 LFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEA   82 (254)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999764 45667777776677888999999999999999999999


Q ss_pred             HcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCC--Chhhh
Q 024230           94 LFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANV--GTVYS  171 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~--~~~y~  171 (270)
                      .+ +++|++|||||.....++.+.+.++|++++++|+.+++.++++++|.|.+++.++||++||..+..+.+.  +..|+
T Consensus        83 ~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~  161 (254)
T PRK06114         83 EL-GALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYN  161 (254)
T ss_pred             Hc-CCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCCcchHH
Confidence            88 8999999999998777888899999999999999999999999999998887899999999998876554  67899


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCc
Q 024230          172 ATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI  251 (270)
Q Consensus       172 ~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  251 (270)
                      ++|+|+++++++++.|+.++||+|+.|+||+++|+|.... ......+.+....|.++..+|+|+++.++||+++.++++
T Consensus       162 ~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~-~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~~  240 (254)
T PRK06114        162 ASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRP-EMVHQTKLFEEQTPMQRMAKVDEMVGPAVFLLSDAASFC  240 (254)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccc-cchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCc
Confidence            9999999999999999999999999999999999986532 112223445667789999999999999999999999999


Q ss_pred             cCcEEeecCCccc
Q 024230          252 TGQTVCIDGGFTV  264 (270)
Q Consensus       252 ~G~~i~vdgG~~~  264 (270)
                      ||+++.+|||+..
T Consensus       241 tG~~i~~dgg~~~  253 (254)
T PRK06114        241 TGVDLLVDGGFVC  253 (254)
T ss_pred             CCceEEECcCEec
Confidence            9999999999865

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=1.5e-46  Score=324.16  Aligned_cols=251  Identities=22%  Similarity=0.259  Sum_probs=213.8

Q ss_pred             ccCCCCCCEEEEecC--CCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhc----------CC---eEEEEEccC
Q 024230           14 NRWSLQGMTALVTGG--TKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK----------GL---KVTGSVCDV   78 (270)
Q Consensus        14 ~~~~l~gk~vlItG~--s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~----------~~---~~~~~~~D~   78 (270)
                      ..++|+||++||||+  ++|||+++|+.|+++|++|++ +|+.+.++++...++..          +.   ....+.+|+
T Consensus         3 ~~~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   81 (303)
T PLN02730          3 LPIDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDA   81 (303)
T ss_pred             CCcCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecce
Confidence            457899999999999  899999999999999999998 78888887777666531          11   146788898


Q ss_pred             --CC------------------HHHHHHHHHHHHHHcCCcccEEEECCCCCC--CCCCCCCCHHHHHHHHHHhhHHHHHH
Q 024230           79 --SS------------------RPQRQTLINTVSSLFNGKLNIFVNNVGTSV--LKPTLEYNAEDFSLVMSTNFESAFHL  136 (270)
Q Consensus        79 --~~------------------~~~~~~~~~~i~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l  136 (270)
                        ++                  +++++++++++.+.+ +++|+||||||...  .+++.+.+.++|++++++|+.+++.+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~-G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l  160 (303)
T PLN02730         82 VFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADF-GSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSL  160 (303)
T ss_pred             ecCccccCchhhhcccccccCCHHHHHHHHHHHHHHc-CCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHH
Confidence              43                  348999999999998 89999999998643  47888999999999999999999999


Q ss_pred             HHHHHHHHHhcCCcEEEEecCccccccCCCC-hhhhhhHHHHHHHHHHHHHHHcc-CCceEEEEecCcccCCCCccccCC
Q 024230          137 CQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAK-DNIRTNSVAPWYIRTPFTEPLLGN  214 (270)
Q Consensus       137 ~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~-~~y~~sKaal~~~~~sla~el~~-~~i~v~~v~pG~v~t~~~~~~~~~  214 (270)
                      ++.++|+|+++  |+||++||..+..+.+++ ..|++||+|+++|+|+|+.|+++ +|||||+|+||+++|+|...+...
T Consensus       161 ~~~~~p~m~~~--G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~~~  238 (303)
T PLN02730        161 LQHFGPIMNPG--GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGFI  238 (303)
T ss_pred             HHHHHHHHhcC--CEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhccccc
Confidence            99999999763  899999999998888865 47999999999999999999986 799999999999999987653212


Q ss_pred             hhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCccccccc
Q 024230          215 GKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNGFF  268 (270)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~~  268 (270)
                      +...+......|.++...|+|+++.++||+|+.+.+++|+++.+|||++++|+.
T Consensus       239 ~~~~~~~~~~~pl~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~~~~g~~  292 (303)
T PLN02730        239 DDMIEYSYANAPLQKELTADEVGNAAAFLASPLASAITGATIYVDNGLNAMGLA  292 (303)
T ss_pred             HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCccccccC
Confidence            222233334457788899999999999999999999999999999999999864

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=100.00  E-value=2.8e-46  Score=317.18  Aligned_cols=254  Identities=41%  Similarity=0.580  Sum_probs=222.7

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcC---CeEEEEEccCCCHHHHHHHHHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG---LKVTGSVCDVSSRPQRQTLINT   90 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~   90 (270)
                      .++.|.||+++|||+++|||+++|++|++.|++|++++|+++.++....++...+   .++..+.||++++++++++++.
T Consensus         2 ~~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~   81 (270)
T KOG0725|consen    2 SGGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEF   81 (270)
T ss_pred             CCccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHH
Confidence            3578999999999999999999999999999999999999999988888777654   4599999999999999999999


Q ss_pred             HHHHcCCcccEEEECCCCCCCC-CCCCCCHHHHHHHHHHhhH-HHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCC-
Q 024230           91 VSSLFNGKLNIFVNNVGTSVLK-PTLEYNAEDFSLVMSTNFE-SAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG-  167 (270)
Q Consensus        91 i~~~~~~~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~n~~-~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~-  167 (270)
                      ..+++.|++|+||||||..... ++.+.++|+|++++++|+. +.+.+.+.+.|+++++++|.|+++||..+..+.+.. 
T Consensus        82 ~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~~  161 (270)
T KOG0725|consen   82 AVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGSG  161 (270)
T ss_pred             HHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCc
Confidence            9998558999999999997655 7899999999999999999 577888888888888888999999999998876665 


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC---hhhHHH--HhhcCCCCCCCChHhHHHHHHH
Q 024230          168 TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN---GKFVDE--VKSRTPMGRLGEPKEVSSLVAF  242 (270)
Q Consensus       168 ~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~dva~~~~~  242 (270)
                      ..|+++|+|+++|+|++|.||+++|||||+|+||++.|++.......   .++.+.  .....|.++.+.|+|+++.+.|
T Consensus       162 ~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~gr~g~~~eva~~~~f  241 (270)
T KOG0725|consen  162 VAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPLGRVGTPEEVAEAAAF  241 (270)
T ss_pred             ccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccccCCccCHHHHHHhHHh
Confidence            79999999999999999999999999999999999999982221111   222222  3345689999999999999999


Q ss_pred             HhCCCCCCccCcEEeecCCcccccc
Q 024230          243 LCMPAASYITGQTVCIDGGFTVNGF  267 (270)
Q Consensus       243 l~s~~~~~~~G~~i~vdgG~~~~~~  267 (270)
                      |++++++|++|+.+.+|||.+..+.
T Consensus       242 la~~~asyitG~~i~vdgG~~~~~~  266 (270)
T KOG0725|consen  242 LASDDASYITGQTIIVDGGFTVVGP  266 (270)
T ss_pred             hcCcccccccCCEEEEeCCEEeecc
Confidence            9999878999999999999998764

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=3.6e-46  Score=302.33  Aligned_cols=228  Identities=24%  Similarity=0.328  Sum_probs=205.0

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      ..+++|+++|||||+|||.++|+.|+++|++|++++|+.++++++.+++..  .++.++..|++|.++++.+++.+.+.|
T Consensus         2 ~~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~--~~~~~~~~DVtD~~~~~~~i~~~~~~~   79 (246)
T COG4221           2 TTLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA--GAALALALDVTDRAAVEAAIEALPEEF   79 (246)
T ss_pred             CCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc--CceEEEeeccCCHHHHHHHHHHHHHhh
Confidence            457889999999999999999999999999999999999999999998865  679999999999999999999999999


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKG  175 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKa  175 (270)
                       +++|+||||||.....++.+.+.++|++|+++|+.|.++.+++++|.|.+++.|+|||+||++|..+.|+...||++|+
T Consensus        80 -g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~ATK~  158 (246)
T COG4221          80 -GRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKA  158 (246)
T ss_pred             -CcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchhhHH
Confidence             8999999999998889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCC
Q 024230          176 AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA  247 (270)
Q Consensus       176 al~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (270)
                      ++.+|++.|+.|+..++|||..|+||.+.|...+.+...+ ..+.....-......+|+|||+.+.|.++..
T Consensus       159 aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g-~~~~~~~~y~~~~~l~p~dIA~~V~~~~~~P  229 (246)
T COG4221         159 AVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEG-DDERADKVYKGGTALTPEDIAEAVLFAATQP  229 (246)
T ss_pred             HHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCc-hhhhHHHHhccCCCCCHHHHHHHHHHHHhCC
Confidence            9999999999999999999999999999887666665432 1111111112334678999999999999754

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=8e-46  Score=313.80  Aligned_cols=249  Identities=26%  Similarity=0.471  Sum_probs=228.0

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .++|++|++|||||+++||+++|++|+++|++|++++|+++.+++..+++...+.++..+.+|++++++++++++++.+.
T Consensus         4 ~~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (254)
T PRK08085          4 LFSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKD   83 (254)
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHh
Confidence            36789999999999999999999999999999999999999888888888776778889999999999999999999988


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                      + +++|++|||+|.....++.+.+.++|++++++|+.+++.+++++.++|.+++.++||++||..+..+.+....|+++|
T Consensus        84 ~-~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  162 (254)
T PRK08085         84 I-GPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASK  162 (254)
T ss_pred             c-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCCCcchHHHH
Confidence            8 799999999998877788899999999999999999999999999999877778999999999888888899999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCc
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ  254 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  254 (270)
                      +++++++++++.|++++||++++|+||+++|++.......+...+......|.+++.+|+|+++++.||+++.++++||+
T Consensus       163 ~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~~~~i~G~  242 (254)
T PRK08085        163 GAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSSKASDFVNGH  242 (254)
T ss_pred             HHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCC
Confidence            99999999999999999999999999999999876654334444555667788999999999999999999999999999


Q ss_pred             EEeecCCccc
Q 024230          255 TVCIDGGFTV  264 (270)
Q Consensus       255 ~i~vdgG~~~  264 (270)
                      ++.+|||+..
T Consensus       243 ~i~~dgg~~~  252 (254)
T PRK08085        243 LLFVDGGMLV  252 (254)
T ss_pred             EEEECCCeee
Confidence            9999999864

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.2e-46  Score=316.38  Aligned_cols=246  Identities=18%  Similarity=0.281  Sum_probs=210.4

Q ss_pred             CCCCEEEEecCCC--cHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           18 LQGMTALVTGGTK--GLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        18 l~gk~vlItG~s~--giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      ++||+++||||++  |||+++|+.|+++|++|++++|+. +.++..+++......+.++.+|++|+++++++++++.+.+
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVW   82 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch-hHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhc
Confidence            7899999999986  999999999999999999999873 4444555555444456788999999999999999999988


Q ss_pred             CCcccEEEECCCCCCCCC-----CCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhh
Q 024230           96 NGKLNIFVNNVGTSVLKP-----TLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVY  170 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y  170 (270)
                       +++|++|||||.....+     +.+.+.++|++++++|+.+++.+++.+.|.|. + +|+||++||..+..+.+.+..|
T Consensus        83 -g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~-~g~Iv~iss~~~~~~~~~~~~Y  159 (262)
T PRK07984         83 -PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN-P-GSALLTLSYLGAERAIPNYNVM  159 (262)
T ss_pred             -CCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhc-C-CcEEEEEecCCCCCCCCCcchh
Confidence             79999999999854322     55688999999999999999999999998664 3 4899999999988888889999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCC
Q 024230          171 SATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY  250 (270)
Q Consensus       171 ~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  250 (270)
                      ++||+|+++|+|+++.|++++|||||+|+||+++|++...........+......|.+++..|+|++++++||+++.+++
T Consensus       160 ~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~~~~  239 (262)
T PRK07984        160 GLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAG  239 (262)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCCCcCCCCHHHHHHHHHHHcCccccc
Confidence            99999999999999999999999999999999999875433222233344455678899999999999999999999999


Q ss_pred             ccCcEEeecCCcccccc
Q 024230          251 ITGQTVCIDGGFTVNGF  267 (270)
Q Consensus       251 ~~G~~i~vdgG~~~~~~  267 (270)
                      ++|+++.+|||+++-.+
T Consensus       240 itG~~i~vdgg~~~~~~  256 (262)
T PRK07984        240 ISGEVVHVDGGFSIAAM  256 (262)
T ss_pred             ccCcEEEECCCcccccc
Confidence            99999999999876443

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.7e-46  Score=315.18  Aligned_cols=250  Identities=31%  Similarity=0.470  Sum_probs=222.1

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK--GLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      ..+++||+++||||++|||+++|++|+++|++|++++|+++++++..+++...  +.++.++.+|++|+++++++++++.
T Consensus         3 ~~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   82 (265)
T PRK07062          3 QIQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVE   82 (265)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999999888877777654  3478899999999999999999999


Q ss_pred             HHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhh
Q 024230           93 SLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSA  172 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~  172 (270)
                      +.+ +++|++|||||.....++.+.+.++|++.+++|+.+++.+++.++|+|++++.|+||++||..+..+.++...|++
T Consensus        83 ~~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~a  161 (265)
T PRK07062         83 ARF-GGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATSA  161 (265)
T ss_pred             Hhc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCchHhHH
Confidence            988 7999999999998778888999999999999999999999999999999887899999999999999899999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC-----C---hhhHHHH--hhcCCCCCCCChHhHHHHHHH
Q 024230          173 TKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG-----N---GKFVDEV--KSRTPMGRLGEPKEVSSLVAF  242 (270)
Q Consensus       173 sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~-----~---~~~~~~~--~~~~~~~~~~~~~dva~~~~~  242 (270)
                      +|+++++|+++++.|+.++||+|++|+||+++|++......     .   ....+++  ....|.+++.+|+|++++++|
T Consensus       162 sKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~  241 (265)
T PRK07062        162 ARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPDEAARALFF  241 (265)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCCCCHHHHHHHHHH
Confidence            99999999999999999999999999999999997643211     0   1111111  235688899999999999999


Q ss_pred             HhCCCCCCccCcEEeecCCcccc
Q 024230          243 LCMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       243 l~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                      |+++.+.++||+++.+|||+..+
T Consensus       242 L~s~~~~~~tG~~i~vdgg~~~~  264 (265)
T PRK07062        242 LASPLSSYTTGSHIDVSGGFARH  264 (265)
T ss_pred             HhCchhcccccceEEEcCceEee
Confidence            99998999999999999998653

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=7.2e-46  Score=317.30  Aligned_cols=247  Identities=19%  Similarity=0.231  Sum_probs=208.1

Q ss_pred             cCCCCCCEEEEecCC--CcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGT--KGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        15 ~~~l~gk~vlItG~s--~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      +-.|+||+++||||+  +|||+++|++|+++|++|++++|++... +..+++.+.-+....+++|++|+++++++++++.
T Consensus         5 ~~~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~-~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   83 (272)
T PRK08159          5 SGLMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALK-KRVEPLAAELGAFVAGHCDVTDEASIDAVFETLE   83 (272)
T ss_pred             cccccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHH-HHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHH
Confidence            345689999999997  8999999999999999999998874322 2222332221235678999999999999999999


Q ss_pred             HHcCCcccEEEECCCCCC----CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCCh
Q 024230           93 SLFNGKLNIFVNNVGTSV----LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGT  168 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~  168 (270)
                      +.+ +++|++|||||...    ..++.+.+.++|++++++|+.+++.+++.+.|+|.+  .|+||+++|..+..+.|++.
T Consensus        84 ~~~-g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~p~~~  160 (272)
T PRK08159         84 KKW-GKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD--GGSILTLTYYGAEKVMPHYN  160 (272)
T ss_pred             Hhc-CCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC--CceEEEEeccccccCCCcch
Confidence            988 79999999999864    256778999999999999999999999999999954  48999999998888889999


Q ss_pred             hhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCC
Q 024230          169 VYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAA  248 (270)
Q Consensus       169 ~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  248 (270)
                      .|++||+|+.+|+++++.|++++||+|++|+||+++|++...........+......|.+++.+|+|++++++||+++.+
T Consensus       161 ~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~~~~L~s~~~  240 (272)
T PRK08159        161 VMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIEEVGDSALYLLSDLS  240 (272)
T ss_pred             hhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHHHHHHhCCcccccCCHHHHHHHHHHHhCccc
Confidence            99999999999999999999999999999999999998765432211111222335788899999999999999999999


Q ss_pred             CCccCcEEeecCCcccc
Q 024230          249 SYITGQTVCIDGGFTVN  265 (270)
Q Consensus       249 ~~~~G~~i~vdgG~~~~  265 (270)
                      +++||+++.+|||+++.
T Consensus       241 ~~itG~~i~vdgG~~~~  257 (272)
T PRK08159        241 RGVTGEVHHVDSGYHVV  257 (272)
T ss_pred             cCccceEEEECCCceee
Confidence            99999999999998754

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1e-45  Score=314.47  Aligned_cols=244  Identities=22%  Similarity=0.242  Sum_probs=204.3

Q ss_pred             CCCCCEEEEecC--CCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           17 SLQGMTALVTGG--TKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        17 ~l~gk~vlItG~--s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .++||+++||||  ++|||+++|++|+++|++|++++|.....++ .+++.+.......+.+|++|+++++++++++.+.
T Consensus         3 ~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   81 (260)
T PRK06997          3 FLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDR-ITEFAAEFGSDLVFPCDVASDEQIDALFASLGQH   81 (260)
T ss_pred             ccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHH-HHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHH
Confidence            378999999996  6899999999999999999998765332222 2223222122346899999999999999999998


Q ss_pred             cCCcccEEEECCCCCCCC----C-CCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChh
Q 024230           95 FNGKLNIFVNNVGTSVLK----P-TLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTV  169 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~----~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~  169 (270)
                      + +++|++|||||.....    + +.+.+.++|++.+++|+.+++.++++++|+|.+  .|+||++||..+..+.+.+..
T Consensus        82 ~-g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~--~g~Ii~iss~~~~~~~~~~~~  158 (260)
T PRK06997         82 W-DGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD--DASLLTLSYLGAERVVPNYNT  158 (260)
T ss_pred             h-CCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC--CceEEEEeccccccCCCCcch
Confidence            8 8999999999986432    2 346789999999999999999999999999943  489999999999888888999


Q ss_pred             hhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCC
Q 024230          170 YSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAAS  249 (270)
Q Consensus       170 y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  249 (270)
                      |++||+|+++|+|+++.|++++||||++|+||+++|++...+...+...+......|+++..+|+|+++++.||+++.++
T Consensus       159 Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~l~s~~~~  238 (260)
T PRK06997        159 MGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESNAPLRRNVTIEEVGNVAAFLLSDLAS  238 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHHhcCcccccCCHHHHHHHHHHHhCcccc
Confidence            99999999999999999999999999999999999987654322222233445567889999999999999999999999


Q ss_pred             CccCcEEeecCCccc
Q 024230          250 YITGQTVCIDGGFTV  264 (270)
Q Consensus       250 ~~~G~~i~vdgG~~~  264 (270)
                      ++||+++.+|||++.
T Consensus       239 ~itG~~i~vdgg~~~  253 (260)
T PRK06997        239 GVTGEITHVDSGFNA  253 (260)
T ss_pred             CcceeEEEEcCChhh
Confidence            999999999999764

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=2e-45  Score=311.38  Aligned_cols=247  Identities=30%  Similarity=0.478  Sum_probs=219.7

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .++++||+++|||+++|||.++|++|+++|++|++++++..  ++..+++...+.++..+.+|++|.++++++++++.+.
T Consensus         5 ~~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   82 (253)
T PRK08993          5 AFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAE   82 (253)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            45799999999999999999999999999999999887643  3444555555667889999999999999999999998


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCccccccCCCChhhhhh
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                      + +++|++|||||.....++.+.+.++|++++++|+.+++.+++++.|+|.+++ .|+||++||..+..+.+....|++|
T Consensus        83 ~-~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  161 (253)
T PRK08993         83 F-GHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTAS  161 (253)
T ss_pred             h-CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcchHHH
Confidence            8 7999999999998777888999999999999999999999999999998764 5899999999999988888999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccC
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG  253 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  253 (270)
                      |+|+++++++++.|+.++||+|+.|+||+++|++...+.......+.+....|.+++..|+|+++.+.||+++.+++++|
T Consensus       162 Kaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~s~~~~~~~G  241 (253)
T PRK08993        162 KSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPVVFLASSASDYING  241 (253)
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccC
Confidence            99999999999999999999999999999999987655433333345566778899999999999999999999999999


Q ss_pred             cEEeecCCccc
Q 024230          254 QTVCIDGGFTV  264 (270)
Q Consensus       254 ~~i~vdgG~~~  264 (270)
                      +++.+|||+..
T Consensus       242 ~~~~~dgg~~~  252 (253)
T PRK08993        242 YTIAVDGGWLA  252 (253)
T ss_pred             cEEEECCCEec
Confidence            99999999753

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-45  Score=311.85  Aligned_cols=248  Identities=33%  Similarity=0.543  Sum_probs=224.2

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .++++||++|||||+++||.+++++|+++|++|++++|+ +..++..+.+...+.++.++.+|++++++++++++++.+.
T Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   88 (258)
T PRK06935         10 FFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEE   88 (258)
T ss_pred             cccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999998 5556666666666678899999999999999999999999


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                      + +++|++|||+|.....++.+.+.++|++.+++|+.+++.+++++.|+|.+++.|+||++||..+..+.+....|+++|
T Consensus        89 ~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  167 (258)
T PRK06935         89 F-GKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASK  167 (258)
T ss_pred             c-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCchhhHHHH
Confidence            8 799999999998777788889999999999999999999999999999988889999999999998888899999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCc
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ  254 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  254 (270)
                      +|++++++++++|+.++||+|+.|+||+++|++.......+...+......+.++..+|+|+++.+.||+++.+++++|+
T Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  247 (258)
T PRK06935        168 HGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIPAGRWGEPDDLMGAAVFLASRASDYVNGH  247 (258)
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhcCCCCC
Confidence            99999999999999999999999999999999876554333333445556788999999999999999999999999999


Q ss_pred             EEeecCCccc
Q 024230          255 TVCIDGGFTV  264 (270)
Q Consensus       255 ~i~vdgG~~~  264 (270)
                      ++.+|||.++
T Consensus       248 ~i~~dgg~~~  257 (258)
T PRK06935        248 ILAVDGGWLV  257 (258)
T ss_pred             EEEECCCeec
Confidence            9999999765

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.5e-45  Score=314.03  Aligned_cols=246  Identities=31%  Similarity=0.520  Sum_probs=218.3

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      .++||++|||||++|||+++|++|+++|++|++++|+ +.+++..+++.+.+.++.++.+|++++++++++++++.+.+ 
T Consensus         3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-   80 (272)
T PRK08589          3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQF-   80 (272)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHc-
Confidence            4789999999999999999999999999999999999 77777777777767789999999999999999999999998 


Q ss_pred             CcccEEEECCCCCC-CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHH
Q 024230           97 GKLNIFVNNVGTSV-LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKG  175 (270)
Q Consensus        97 ~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKa  175 (270)
                      +++|++|||||... ..++.+.+.+.|++++++|+.+++.+++.++|+|.+++ |+||++||..+..+.+....|++||+
T Consensus        81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKa  159 (272)
T PRK08589         81 GRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADLYRSGYNAAKG  159 (272)
T ss_pred             CCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCCCCCchHHHHHH
Confidence            79999999999864 45777889999999999999999999999999998765 89999999999998888999999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCCh--hhHH----HHhhcCCCCCCCChHhHHHHHHHHhCCCCC
Q 024230          176 AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNG--KFVD----EVKSRTPMGRLGEPKEVSSLVAFLCMPAAS  249 (270)
Q Consensus       176 al~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~--~~~~----~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  249 (270)
                      |+++|+++++.|++++||+|++|+||+++|++........  ....    ......|.+++.+|+|+++.+.||+++.+.
T Consensus       160 al~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~  239 (272)
T PRK08589        160 AVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDSS  239 (272)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCCCCCCcCHHHHHHHHHHHcCchhc
Confidence            9999999999999999999999999999999876543211  1111    122346788899999999999999999899


Q ss_pred             CccCcEEeecCCcccc
Q 024230          250 YITGQTVCIDGGFTVN  265 (270)
Q Consensus       250 ~~~G~~i~vdgG~~~~  265 (270)
                      +++|+++.+|||+...
T Consensus       240 ~~~G~~i~vdgg~~~~  255 (272)
T PRK08589        240 FITGETIRIDGGVMAY  255 (272)
T ss_pred             CcCCCEEEECCCcccC
Confidence            9999999999997643

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-45  Score=313.61  Aligned_cols=249  Identities=24%  Similarity=0.369  Sum_probs=219.5

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeC-ChhHHHHHHHHHHhc-CCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSR-TETELNECIHHLQMK-GLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r-~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      +.+|+||+++||||++|||+++|++|+++|++|++++| +++.++...+++... +.++.++.+|++|+++++++++++.
T Consensus         3 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   82 (260)
T PRK08416          3 SNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKID   82 (260)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999998865 555666666666543 5678999999999999999999999


Q ss_pred             HHcCCcccEEEECCCCCC------CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCC
Q 024230           93 SLFNGKLNIFVNNVGTSV------LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANV  166 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~  166 (270)
                      +.+ +++|++|||||...      ..++.+.+.+++++.+++|+.+++.+++.++|+|++++.|+||++||..+..+.++
T Consensus        83 ~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  161 (260)
T PRK08416         83 EDF-DRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIEN  161 (260)
T ss_pred             Hhc-CCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCC
Confidence            988 79999999998642      34667888999999999999999999999999998877789999999999888899


Q ss_pred             ChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCC
Q 024230          167 GTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP  246 (270)
Q Consensus       167 ~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (270)
                      +..|++||+|+++|+++++.|++++||+|++|+||+++|++...+...+...+......|.+++.+|+|++++++||+++
T Consensus       162 ~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~~~  241 (260)
T PRK08416        162 YAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPLNRMGQPEDLAGACLFLCSE  241 (260)
T ss_pred             cccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCh
Confidence            99999999999999999999999999999999999999998765543334444555667889999999999999999999


Q ss_pred             CCCCccCcEEeecCCccc
Q 024230          247 AASYITGQTVCIDGGFTV  264 (270)
Q Consensus       247 ~~~~~~G~~i~vdgG~~~  264 (270)
                      .+.+++|+.+.+|||+..
T Consensus       242 ~~~~~~G~~i~vdgg~~~  259 (260)
T PRK08416        242 KASWLTGQTIVVDGGTTF  259 (260)
T ss_pred             hhhcccCcEEEEcCCeec
Confidence            899999999999999753

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-45  Score=309.30  Aligned_cols=250  Identities=31%  Similarity=0.528  Sum_probs=229.2

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .++++||+++||||+++||+++|++|+++|++|++++|++++.++..+++...+.++.++.+|++|+++++++++++.+.
T Consensus         5 ~~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   84 (255)
T PRK07523          5 LFDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAE   84 (255)
T ss_pred             ccCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHh
Confidence            45789999999999999999999999999999999999998888888888776778999999999999999999999988


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                      + +++|++|||+|.....++.+.+.++|++++++|+.+++.+++++.++|.+++.|+||++||..+..+.+++..|+++|
T Consensus        85 ~-~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~sK  163 (255)
T PRK07523         85 I-GPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTATK  163 (255)
T ss_pred             c-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCCCccHHHHH
Confidence            8 799999999999888888899999999999999999999999999999888789999999999988889999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCc
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ  254 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  254 (270)
                      +++++++++++.|++++||+|++|+||+++|++.......+...+.+....|.+++..|+|++++++||+++.+++++|+
T Consensus       164 ~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  243 (255)
T PRK07523        164 GAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPAGRWGKVEELVGACVFLASDASSFVNGH  243 (255)
T ss_pred             HHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCc
Confidence            99999999999999999999999999999999876554444444566667788999999999999999999999999999


Q ss_pred             EEeecCCcccc
Q 024230          255 TVCIDGGFTVN  265 (270)
Q Consensus       255 ~i~vdgG~~~~  265 (270)
                      ++.+|||.+++
T Consensus       244 ~i~~~gg~~~~  254 (255)
T PRK07523        244 VLYVDGGITAS  254 (255)
T ss_pred             EEEECCCeecc
Confidence            99999997653

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=5.1e-45  Score=312.89  Aligned_cols=250  Identities=28%  Similarity=0.419  Sum_probs=224.0

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      +++++++|+++|||++++||++++++|+++|++|++++|+.+..+++.+++...+.++.++.+|+++++++.++++++.+
T Consensus         4 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   83 (278)
T PRK08277          4 NLFSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILE   83 (278)
T ss_pred             ceeccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            35678999999999999999999999999999999999999888888888877777899999999999999999999999


Q ss_pred             HcCCcccEEEECCCCCCC---------------CCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCc
Q 024230           94 LFNGKLNIFVNNVGTSVL---------------KPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSA  158 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~---------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~  158 (270)
                      .+ +++|++|||||....               .++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||.
T Consensus        84 ~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~  162 (278)
T PRK08277         84 DF-GPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSM  162 (278)
T ss_pred             Hc-CCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccc
Confidence            88 799999999996432               34667889999999999999999999999999988878999999999


Q ss_pred             cccccCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC-----hhhHHHHhhcCCCCCCCCh
Q 024230          159 LGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN-----GKFVDEVKSRTPMGRLGEP  233 (270)
Q Consensus       159 ~~~~~~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~  233 (270)
                      .++.+.++...|++||+|+++|+|+++.|++++||+|+.|+||+++|++.+.+...     ....+.+....|.+++.+|
T Consensus       163 ~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~  242 (278)
T PRK08277        163 NAFTPLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTPMGRFGKP  242 (278)
T ss_pred             hhcCCCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccCCccCCCCH
Confidence            99999999999999999999999999999999999999999999999987654321     1223345566788999999


Q ss_pred             HhHHHHHHHHhCC-CCCCccCcEEeecCCccc
Q 024230          234 KEVSSLVAFLCMP-AASYITGQTVCIDGGFTV  264 (270)
Q Consensus       234 ~dva~~~~~l~s~-~~~~~~G~~i~vdgG~~~  264 (270)
                      +|++++++||+++ .+.++||+++.+|||++.
T Consensus       243 ~dva~~~~~l~s~~~~~~~tG~~i~vdgG~~~  274 (278)
T PRK08277        243 EELLGTLLWLADEKASSFVTGVVLPVDGGFSA  274 (278)
T ss_pred             HHHHHHHHHHcCccccCCcCCCEEEECCCeec
Confidence            9999999999999 899999999999999763

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=8.6e-45  Score=313.96  Aligned_cols=245  Identities=27%  Similarity=0.327  Sum_probs=216.0

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh--hHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTE--TELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .+++|+++||||++|||+++|++|+++|++|++++|+.  +..+++.+.+...+.++.++.+|++++++++++++++.+.
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  125 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA  125 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999987653  3455566666666777889999999999999999999988


Q ss_pred             cCCcccEEEECCCCC-CCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhh
Q 024230           95 FNGKLNIFVNNVGTS-VLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        95 ~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                      + +++|++|||||.. ...++.+.+.++|++++++|+.+++.+++++.|+|++  .++||++||..++.+.+....|++|
T Consensus       126 ~-g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~iv~iSS~~~~~~~~~~~~Y~as  202 (294)
T PRK07985        126 L-GGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK--GASIITTSSIQAYQPSPHLLDYAAT  202 (294)
T ss_pred             h-CCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc--CCEEEEECCchhccCCCCcchhHHH
Confidence            8 7999999999975 3466788999999999999999999999999999965  4799999999999998899999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccC
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG  253 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  253 (270)
                      |+|+++++++++.|++++||+|++|+||+++|++...........+.+....|.++..+|+|+++++.||+++.+++++|
T Consensus       203 Kaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~~~fL~s~~~~~itG  282 (294)
T PRK07985        203 KAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTA  282 (294)
T ss_pred             HHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhccCCCCCCCCHHHHHHHHHhhhChhcCCccc
Confidence            99999999999999999999999999999999986432222333445666778899999999999999999999999999


Q ss_pred             cEEeecCCccc
Q 024230          254 QTVCIDGGFTV  264 (270)
Q Consensus       254 ~~i~vdgG~~~  264 (270)
                      +++.+|||+++
T Consensus       283 ~~i~vdgG~~~  293 (294)
T PRK07985        283 EVHGVCGGEHL  293 (294)
T ss_pred             cEEeeCCCeeC
Confidence            99999999875

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-44  Score=305.53  Aligned_cols=248  Identities=29%  Similarity=0.449  Sum_probs=226.5

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .+++++|+++||||+++||.+++++|+++|++|++++|+.+.++++.+++.+.+.++.++.+|+++.++++++++++.+.
T Consensus         3 ~~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (252)
T PRK07035          3 LFDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRER   82 (252)
T ss_pred             ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999999998888888888777777888999999999999999999998


Q ss_pred             cCCcccEEEECCCCCC-CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhh
Q 024230           95 FNGKLNIFVNNVGTSV-LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        95 ~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                      + +++|++|||+|... ..++.+.+.+++++.+++|+.+++.++++++|+|.+++.++|+++||..+..+.+++..|++|
T Consensus        83 ~-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  161 (252)
T PRK07035         83 H-GRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSIT  161 (252)
T ss_pred             c-CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCCcchHHH
Confidence            8 79999999999753 466778899999999999999999999999999988878999999999999888999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccC
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG  253 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  253 (270)
                      |+++++|+++++.|+.++||+|++|+||+++|++...........+......|.++..+|+|+++.+.||+++...+++|
T Consensus       162 K~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g  241 (252)
T PRK07035        162 KAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIPLRRHAEPSEMAGAVLYLASDASSYTTG  241 (252)
T ss_pred             HHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCCCCCcCCHHHHHHHHHHHhCccccCccC
Confidence            99999999999999999999999999999999987766544444455566678889999999999999999999999999


Q ss_pred             cEEeecCCcc
Q 024230          254 QTVCIDGGFT  263 (270)
Q Consensus       254 ~~i~vdgG~~  263 (270)
                      +++.+|||++
T Consensus       242 ~~~~~dgg~~  251 (252)
T PRK07035        242 ECLNVDGGYL  251 (252)
T ss_pred             CEEEeCCCcC
Confidence            9999999975

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-44  Score=306.35  Aligned_cols=249  Identities=29%  Similarity=0.451  Sum_probs=226.1

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      ++++++|+++|||++++||.+++++|+++|++|++++|+++.+++..+++...+.++.++.+|+++.+++.++++++.+.
T Consensus         2 ~~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   81 (253)
T PRK06172          2 SMTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAA   81 (253)
T ss_pred             CcCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999999888888888777778999999999999999999999988


Q ss_pred             cCCcccEEEECCCCCCC-CCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhh
Q 024230           95 FNGKLNIFVNNVGTSVL-KPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                      + +++|++|||+|.... .++.+.+.+++++++++|+.+++.++++++|+|.+++.+++|++||..+..+.++...|++|
T Consensus        82 ~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~s  160 (253)
T PRK06172         82 Y-GRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAAS  160 (253)
T ss_pred             h-CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHH
Confidence            8 799999999998643 45778899999999999999999999999999988877899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC-ChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCcc
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG-NGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT  252 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  252 (270)
                      |+++++|+++++.|+.++||+|++|+||+++|++...... .+...+.+....+.++..+|+|+++.+.||+++.+.+++
T Consensus       161 Kaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ia~~~~~l~~~~~~~~~  240 (253)
T PRK06172        161 KHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVASAVLYLCSDGASFTT  240 (253)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCCCCCccCHHHHHHHHHHHhCccccCcC
Confidence            9999999999999999999999999999999998776533 334444556677888999999999999999999999999


Q ss_pred             CcEEeecCCccc
Q 024230          253 GQTVCIDGGFTV  264 (270)
Q Consensus       253 G~~i~vdgG~~~  264 (270)
                      |++|.+|||.++
T Consensus       241 G~~i~~dgg~~~  252 (253)
T PRK06172        241 GHALMVDGGATA  252 (253)
T ss_pred             CcEEEECCCccC
Confidence            999999999853

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-44  Score=312.41  Aligned_cols=244  Identities=24%  Similarity=0.319  Sum_probs=215.0

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh---------hHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHH
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTE---------TELNECIHHLQMKGLKVTGSVCDVSSRPQRQTL   87 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~---------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   87 (270)
                      .++||+++||||++|||+++|++|+++|++|++++|+.         +.+++..+++...+.++.++.+|++|+++++++
T Consensus         3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~   82 (286)
T PRK07791          3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANL   82 (286)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHH
Confidence            47899999999999999999999999999999998876         667777788877777889999999999999999


Q ss_pred             HHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC------CcEEEEecCcccc
Q 024230           88 INTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG------AASIVLMSSALGI  161 (270)
Q Consensus        88 ~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~------~g~ii~iss~~~~  161 (270)
                      ++++.+.+ +++|++|||||.....++.+.+.++|++++++|+.+++.++++++|+|.++.      .|+||++||..+.
T Consensus        83 ~~~~~~~~-g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~  161 (286)
T PRK07791         83 VDAAVETF-GGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGL  161 (286)
T ss_pred             HHHHHHhc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhC
Confidence            99999988 8999999999998777888999999999999999999999999999997542      3799999999999


Q ss_pred             ccCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCC--CCCChHhHHHH
Q 024230          162 VSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMG--RLGEPKEVSSL  239 (270)
Q Consensus       162 ~~~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~dva~~  239 (270)
                      .+.+++..|++||+|+++|+++++.|++++||+||+|+|| ++|+|.....      .......+.+  +..+|+|++++
T Consensus       162 ~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~~------~~~~~~~~~~~~~~~~pedva~~  234 (286)
T PRK07791        162 QGSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETVF------AEMMAKPEEGEFDAMAPENVSPL  234 (286)
T ss_pred             cCCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhhH------HHHHhcCcccccCCCCHHHHHHH
Confidence            9999999999999999999999999999999999999999 7888764321      1222222333  35789999999


Q ss_pred             HHHHhCCCCCCccCcEEeecCCccccccc
Q 024230          240 VAFLCMPAASYITGQTVCIDGGFTVNGFF  268 (270)
Q Consensus       240 ~~~l~s~~~~~~~G~~i~vdgG~~~~~~~  268 (270)
                      ++||+++.+.+++|+++.+|||+......
T Consensus       235 ~~~L~s~~~~~itG~~i~vdgG~~~~~~~  263 (286)
T PRK07791        235 VVWLGSAESRDVTGKVFEVEGGKISVAEG  263 (286)
T ss_pred             HHHHhCchhcCCCCcEEEEcCCceEEech
Confidence            99999999999999999999999876443

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.1e-45  Score=309.44  Aligned_cols=245  Identities=23%  Similarity=0.213  Sum_probs=207.1

Q ss_pred             cCCCCCCEEEEecC--CCcHHHHHHHHHHHCCCeEEEeeCCh--hHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGG--TKGLGLAVVEELSMLGATVHTCSRTE--TELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINT   90 (270)
Q Consensus        15 ~~~l~gk~vlItG~--s~giG~~la~~l~~~G~~v~l~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   90 (270)
                      +.++++|+++|||+  ++|||+++|++|+++|++|++++|+.  +..+++.+++   +.++.++.+|+++++++++++++
T Consensus         2 ~~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~i~~~~~~   78 (256)
T PRK07889          2 MGLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL---PEPAPVLELDVTNEEHLASLADR   78 (256)
T ss_pred             cccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc---CCCCcEEeCCCCCHHHHHHHHHH
Confidence            34688999999999  89999999999999999999998764  3334444333   33677899999999999999999


Q ss_pred             HHHHcCCcccEEEECCCCCCC----CCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCC
Q 024230           91 VSSLFNGKLNIFVNNVGTSVL----KPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANV  166 (270)
Q Consensus        91 i~~~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~  166 (270)
                      +.+.+ +++|++|||||....    .++.+.++++|++++++|+.+++.+++.++|+|++  .|+||++++. +..+.+.
T Consensus        79 ~~~~~-g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~--~g~Iv~is~~-~~~~~~~  154 (256)
T PRK07889         79 VREHV-DGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE--GGSIVGLDFD-ATVAWPA  154 (256)
T ss_pred             HHHHc-CCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc--CceEEEEeec-ccccCCc
Confidence            99888 899999999998643    45778899999999999999999999999999974  4799999865 3455677


Q ss_pred             ChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCC-CCCChHhHHHHHHHHhC
Q 024230          167 GTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMG-RLGEPKEVSSLVAFLCM  245 (270)
Q Consensus       167 ~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dva~~~~~l~s  245 (270)
                      +..|++||+|+++|+|+++.|++++||+|++|+||+++|+|.+.+.......+......|.+ ++.+|+|+++.++||++
T Consensus       155 ~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~evA~~v~~l~s  234 (256)
T PRK07889        155 YDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPLGWDVKDPTPVARAVVALLS  234 (256)
T ss_pred             cchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcCccccccCCHHHHHHHHHHHhC
Confidence            78899999999999999999999999999999999999998765532223333344556777 58899999999999999


Q ss_pred             CCCCCccCcEEeecCCccccc
Q 024230          246 PAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       246 ~~~~~~~G~~i~vdgG~~~~~  266 (270)
                      +.+.+++|+++.+|||++..+
T Consensus       235 ~~~~~~tG~~i~vdgg~~~~~  255 (256)
T PRK07889        235 DWFPATTGEIVHVDGGAHAMG  255 (256)
T ss_pred             cccccccceEEEEcCceeccC
Confidence            999999999999999987543

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=2.7e-44  Score=304.92  Aligned_cols=253  Identities=44%  Similarity=0.760  Sum_probs=231.6

Q ss_pred             cccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHH
Q 024230           13 QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK--GLKVTGSVCDVSSRPQRQTLINT   90 (270)
Q Consensus        13 ~~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~   90 (270)
                      +.+++++||+++|||++++||++++++|+++|++|++++|+.+..++..+++...  +.++.++.+|+++++++++++++
T Consensus         2 ~~~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   81 (257)
T PRK09242          2 QHRWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDW   81 (257)
T ss_pred             ccccccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHH
Confidence            4567899999999999999999999999999999999999999888888777665  56899999999999999999999


Q ss_pred             HHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhh
Q 024230           91 VSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVY  170 (270)
Q Consensus        91 i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y  170 (270)
                      +.+.+ +++|++|||+|.....++.+.+.++|++.+.+|+.+++.++++++|+|++++.++||++||..+..+.+....|
T Consensus        82 ~~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y  160 (257)
T PRK09242         82 VEDHW-DGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPY  160 (257)
T ss_pred             HHHHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCCcch
Confidence            99988 79999999999877777888999999999999999999999999999988877899999999999998899999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCC
Q 024230          171 SATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY  250 (270)
Q Consensus       171 ~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  250 (270)
                      +++|++++.++++++.|+.+.||++++|+||+++|++...+...+...+......+.++..+|+|+++++.||+++...+
T Consensus       161 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  240 (257)
T PRK09242        161 GMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPEEVAAAVAFLCMPAASY  240 (257)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccc
Confidence            99999999999999999999999999999999999998776655555555666778889999999999999999988889


Q ss_pred             ccCcEEeecCCccccc
Q 024230          251 ITGQTVCIDGGFTVNG  266 (270)
Q Consensus       251 ~~G~~i~vdgG~~~~~  266 (270)
                      ++|+.+.+|||....+
T Consensus       241 ~~g~~i~~~gg~~~~~  256 (257)
T PRK09242        241 ITGQCIAVDGGFLRYG  256 (257)
T ss_pred             ccCCEEEECCCeEeec
Confidence            9999999999987655

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-44  Score=305.87  Aligned_cols=246  Identities=32%  Similarity=0.462  Sum_probs=215.1

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      .++++|+++|||+++|||+++|++|+++|++|++++|+++.+++..+++   +.++.++.+|++++++++++++++.+.+
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   78 (261)
T PRK08265          2 IGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL---GERARFIATDITDDAAIERAVATVVARF   78 (261)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCeeEEEEecCCCHHHHHHHHHHHHHHh
Confidence            3578999999999999999999999999999999999988777666554   4578899999999999999999999988


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKG  175 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKa  175 (270)
                       +++|++|||||...... .+.+.++|++.+++|+.+++.+++++.|+|. ++.|+||++||..+..+.+....|+++|+
T Consensus        79 -g~id~lv~~ag~~~~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~g~ii~isS~~~~~~~~~~~~Y~asKa  155 (261)
T PRK08265         79 -GRVDILVNLACTYLDDG-LASSRADWLAALDVNLVSAAMLAQAAHPHLA-RGGGAIVNFTSISAKFAQTGRWLYPASKA  155 (261)
T ss_pred             -CCCCEEEECCCCCCCCc-CcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cCCcEEEEECchhhccCCCCCchhHHHHH
Confidence             79999999999865444 3578999999999999999999999999997 55689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCCh-hhHHHH-hhcCCCCCCCChHhHHHHHHHHhCCCCCCccC
Q 024230          176 AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNG-KFVDEV-KSRTPMGRLGEPKEVSSLVAFLCMPAASYITG  253 (270)
Q Consensus       176 al~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  253 (270)
                      ++++++++++.|++++||+|++|+||+++|++........ ...+.+ ....|.+++.+|+|+++++.||+++.+.++||
T Consensus       156 a~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~~~~tG  235 (261)
T PRK08265        156 AIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLLGRVGDPEEVAQVVAFLCSDAASFVTG  235 (261)
T ss_pred             HHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhcccCCCCCccCHHHHHHHHHHHcCccccCccC
Confidence            9999999999999999999999999999999875543221 111222 22457889999999999999999999999999


Q ss_pred             cEEeecCCcccccc
Q 024230          254 QTVCIDGGFTVNGF  267 (270)
Q Consensus       254 ~~i~vdgG~~~~~~  267 (270)
                      +.+.+|||+++.+.
T Consensus       236 ~~i~vdgg~~~~~~  249 (261)
T PRK08265        236 ADYAVDGGYSALGP  249 (261)
T ss_pred             cEEEECCCeeccCC
Confidence            99999999987653

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=1.1e-45  Score=310.67  Aligned_cols=233  Identities=39%  Similarity=0.609  Sum_probs=212.8

Q ss_pred             cCC--CcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhc-CCeEEEEEccCCCHHHHHHHHHHHHHHcCCcccEEE
Q 024230           27 GGT--KGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK-GLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFV  103 (270)
Q Consensus        27 G~s--~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~li  103 (270)
                      |++  +|||+++|++|+++|++|++++|+.+++++..+++.+. +.+  ++.+|++++++++++++++.+.+++++|++|
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~--~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV   78 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAE--VIQCDLSDEESVEALFDEAVERFGGRIDILV   78 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSE--EEESCTTSHHHHHHHHHHHHHHHCSSESEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCc--eEeecCcchHHHHHHHHHHHhhcCCCeEEEE
Confidence            566  99999999999999999999999999876666666553 444  5999999999999999999999867999999


Q ss_pred             ECCCCCCC----CCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHHHH
Q 024230          104 NNVGTSVL----KPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQ  179 (270)
Q Consensus       104 ~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal~~  179 (270)
                      ||++....    .++.+.+.++|++.+++|+.+++.+++++.|+|+++  |+||++||..+..+.+++..|+++|+|+++
T Consensus        79 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--gsii~iss~~~~~~~~~~~~y~~sKaal~~  156 (241)
T PF13561_consen   79 NNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKG--GSIINISSIAAQRPMPGYSAYSASKAALEG  156 (241)
T ss_dssp             EEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHE--EEEEEEEEGGGTSBSTTTHHHHHHHHHHHH
T ss_pred             ecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCcccccchhhcccCccchhhHHHHHHHHH
Confidence            99998765    788889999999999999999999999999988774  799999999999999999999999999999


Q ss_pred             HHHHHHHHHcc-CCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEEee
Q 024230          180 LAKNLACEWAK-DNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCI  258 (270)
Q Consensus       180 ~~~sla~el~~-~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~v  258 (270)
                      |+|++|.||++ +|||||+|+||+++|++.......++..+......|++|..+|+|+|+++.||+|+.++++|||+|.|
T Consensus       157 l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~r~~~~~evA~~v~fL~s~~a~~itG~~i~v  236 (241)
T PF13561_consen  157 LTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLGRLGTPEEVANAVLFLASDAASYITGQVIPV  236 (241)
T ss_dssp             HHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTSSHBEHHHHHHHHHHHHSGGGTTGTSEEEEE
T ss_pred             HHHHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhccCCCcCHHHHHHHHHHHhCccccCccCCeEEE
Confidence            99999999999 99999999999999998766555566778888899999999999999999999999999999999999


Q ss_pred             cCCcc
Q 024230          259 DGGFT  263 (270)
Q Consensus       259 dgG~~  263 (270)
                      |||++
T Consensus       237 DGG~s  241 (241)
T PF13561_consen  237 DGGFS  241 (241)
T ss_dssp             STTGG
T ss_pred             CCCcC
Confidence            99985

...

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-44  Score=303.93  Aligned_cols=244  Identities=28%  Similarity=0.381  Sum_probs=212.3

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEee-CChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH--
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCS-RTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL--   94 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~-r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~--   94 (270)
                      +++|+++|||+++|||.++|++|+++|++|+++. |+.+..++...++...+.++..+.+|+++.++++.+++++.+.  
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   81 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence            5789999999999999999999999999998875 5667777777777776777889999999999999999888653  


Q ss_pred             --cC-CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhh
Q 024230           95 --FN-GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYS  171 (270)
Q Consensus        95 --~~-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~  171 (270)
                        ++ +++|++|||||.....++.+.+.++|++++++|+.+++.++++++|.|++  .|+||++||..+..+.++...|+
T Consensus        82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~  159 (252)
T PRK12747         82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD--NSRIINISSAATRISLPDFIAYS  159 (252)
T ss_pred             hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc--CCeEEEECCcccccCCCCchhHH
Confidence              31 38999999999876677888999999999999999999999999999965  37999999999999989999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCc
Q 024230          172 ATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI  251 (270)
Q Consensus       172 ~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  251 (270)
                      +||+++++++++++.|+.++||+||+|+||+++|++...+...+..........+.+++.+|+|+++++.||+++.++++
T Consensus       160 ~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  239 (252)
T PRK12747        160 MTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSRWV  239 (252)
T ss_pred             HHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHHHHHHHHhcCcccCCCCHHHHHHHHHHHcCccccCc
Confidence            99999999999999999999999999999999999876543332222222223467889999999999999999989999


Q ss_pred             cCcEEeecCCcc
Q 024230          252 TGQTVCIDGGFT  263 (270)
Q Consensus       252 ~G~~i~vdgG~~  263 (270)
                      +|+.+.+|||+.
T Consensus       240 ~G~~i~vdgg~~  251 (252)
T PRK12747        240 TGQLIDVSGGSC  251 (252)
T ss_pred             CCcEEEecCCcc
Confidence            999999999975

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=5.1e-44  Score=310.04  Aligned_cols=246  Identities=29%  Similarity=0.411  Sum_probs=217.9

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChh--HHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTET--ELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .|+||++|||||++|||+++|++|+++|++|+++.++.+  ..++..+.++..+.++.++.+|+++.++++++++++.+.
T Consensus        52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  131 (300)
T PRK06128         52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKE  131 (300)
T ss_pred             ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence            588999999999999999999999999999999877543  345566667666778899999999999999999999998


Q ss_pred             cCCcccEEEECCCCCC-CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhh
Q 024230           95 FNGKLNIFVNNVGTSV-LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        95 ~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                      + +++|++|||||... ..++.+.+.++|++++++|+.+++.++++++|+|++  .++||++||..++.+.++...|++|
T Consensus       132 ~-g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~as  208 (300)
T PRK06128        132 L-GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP--GASIINTGSIQSYQPSPTLLDYAST  208 (300)
T ss_pred             h-CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc--CCEEEEECCccccCCCCCchhHHHH
Confidence            8 79999999999853 457788999999999999999999999999999864  4799999999999998999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccC
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG  253 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  253 (270)
                      |+|+++|+++++.|+.++||+|++|+||+++|++...........+.+....|.+++..|+|++.+++||+++.+.+++|
T Consensus       209 K~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~~~~~G  288 (300)
T PRK06128        209 KAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETPMKRPGQPVEMAPLYVLLASQESSYVTG  288 (300)
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCccccCccC
Confidence            99999999999999999999999999999999987543222344455666788999999999999999999999999999


Q ss_pred             cEEeecCCcccc
Q 024230          254 QTVCIDGGFTVN  265 (270)
Q Consensus       254 ~~i~vdgG~~~~  265 (270)
                      +++.+|||..++
T Consensus       289 ~~~~v~gg~~~~  300 (300)
T PRK06128        289 EVFGVTGGLLLS  300 (300)
T ss_pred             cEEeeCCCEeCc
Confidence            999999998753

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-44  Score=307.14  Aligned_cols=247  Identities=29%  Similarity=0.387  Sum_probs=215.1

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      +.+++|+++||||++|||+++|++|+++|++|++++|+++.++++.+++   +.++.++.+|+++.++++.+++++.+.+
T Consensus         2 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (263)
T PRK06200          2 GWLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF---GDHVLVVEGDVTSYADNQRAVDQTVDAF   78 (263)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHhc
Confidence            4578999999999999999999999999999999999988877665544   3467889999999999999999999888


Q ss_pred             CCcccEEEECCCCCC-CCCCCCCCHHH----HHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhh
Q 024230           96 NGKLNIFVNNVGTSV-LKPTLEYNAED----FSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVY  170 (270)
Q Consensus        96 ~~~id~li~~ag~~~-~~~~~~~~~~~----~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y  170 (270)
                       +++|++|||||... ..++.+.+.++    |++++++|+.+++.++++++|.|+++ .|+||+++|..+..+.++...|
T Consensus        79 -g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~Y  156 (263)
T PRK06200         79 -GKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS-GGSMIFTLSNSSFYPGGGGPLY  156 (263)
T ss_pred             -CCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc-CCEEEEECChhhcCCCCCCchh
Confidence             79999999999864 35666666665    88999999999999999999998765 4899999999999988888999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCcccc---------CChhhHHHHhhcCCCCCCCChHhHHHHHH
Q 024230          171 SATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLL---------GNGKFVDEVKSRTPMGRLGEPKEVSSLVA  241 (270)
Q Consensus       171 ~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva~~~~  241 (270)
                      ++||+|+++|+++++.|+++. |+||+|+||+++|+|.....         ..+...+......|.++..+|+|+++++.
T Consensus       157 ~~sK~a~~~~~~~la~el~~~-Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~  235 (263)
T PRK06200        157 TASKHAVVGLVRQLAYELAPK-IRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPEDHTGPYV  235 (263)
T ss_pred             HHHHHHHHHHHHHHHHHHhcC-cEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCCCCCCCHHHHhhhhh
Confidence            999999999999999999985 99999999999999864311         11223344566678999999999999999


Q ss_pred             HHhCCC-CCCccCcEEeecCCccccccc
Q 024230          242 FLCMPA-ASYITGQTVCIDGGFTVNGFF  268 (270)
Q Consensus       242 ~l~s~~-~~~~~G~~i~vdgG~~~~~~~  268 (270)
                      ||+++. +.++||+++.+|||+++.+++
T Consensus       236 fl~s~~~~~~itG~~i~vdgG~~~~~~~  263 (263)
T PRK06200        236 LLASRRNSRALTGVVINADGGLGIRGIR  263 (263)
T ss_pred             heecccccCcccceEEEEcCceeecccC
Confidence            999998 999999999999999988764

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=4.4e-44  Score=301.94  Aligned_cols=246  Identities=30%  Similarity=0.494  Sum_probs=217.7

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      ++++||+++|||++++||+++|++|+++|++|++++|++.  ++..+.++..+.++.++.+|+++++++.++++++.+.+
T Consensus         1 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (248)
T TIGR01832         1 FSLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEF   78 (248)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            3689999999999999999999999999999999998753  34455555556678999999999999999999998887


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCccccccCCCChhhhhhH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                       +++|++|||||.....++.+.+.++|++++++|+.+++.+++++.|+|.+++ .|+||++||..++.+.+....|++||
T Consensus        79 -~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK  157 (248)
T TIGR01832        79 -GHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASK  157 (248)
T ss_pred             -CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHHHH
Confidence             7999999999998777888899999999999999999999999999998765 68999999999988888889999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCc
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ  254 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  254 (270)
                      +++++++++++.|+.++||+|++|+||+++|++...........+.+....|.+++.+|+|+++++.||+++.+++++|+
T Consensus       158 aa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  237 (248)
T TIGR01832       158 HGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILERIPAGRWGTPDDIGGPAVFLASSASDYVNGY  237 (248)
T ss_pred             HHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcCCc
Confidence            99999999999999999999999999999999876543322233344556778899999999999999999989999999


Q ss_pred             EEeecCCccc
Q 024230          255 TVCIDGGFTV  264 (270)
Q Consensus       255 ~i~vdgG~~~  264 (270)
                      ++.+|||+..
T Consensus       238 ~i~~dgg~~~  247 (248)
T TIGR01832       238 TLAVDGGWLA  247 (248)
T ss_pred             EEEeCCCEec
Confidence            9999999863

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=2.2e-44  Score=299.87  Aligned_cols=224  Identities=24%  Similarity=0.326  Sum_probs=204.4

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhc-CCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK-GLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      ..+++|+++|||||+|||+++|++|+++|++|++++|++++++++.++++.. +.++.++.+|+++++++..+.+++...
T Consensus         2 ~~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~   81 (265)
T COG0300           2 GPMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKER   81 (265)
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhc
Confidence            3568899999999999999999999999999999999999999999999875 578999999999999999999999887


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                      . .++|+||||||+...+++.+.++++.++++++|+.+.+.++++++|.|.+++.|+||||+|.+|+.+.|..+.|++||
T Consensus        82 ~-~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY~ATK  160 (265)
T COG0300          82 G-GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATK  160 (265)
T ss_pred             C-CcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHHHHHH
Confidence            6 699999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCC
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP  246 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (270)
                      +++.+|+++|+.|+.++||+|..++||++.|+++. ......     ....+.....+|+++++..++....
T Consensus       161 a~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~-~~~~~~-----~~~~~~~~~~~~~~va~~~~~~l~~  226 (265)
T COG0300         161 AFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFD-AKGSDV-----YLLSPGELVLSPEDVAEAALKALEK  226 (265)
T ss_pred             HHHHHHHHHHHHHhcCCCeEEEEEecCcccccccc-cccccc-----ccccchhhccCHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999986 211111     1112344578999999999998854

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=8.3e-44  Score=301.69  Aligned_cols=251  Identities=29%  Similarity=0.509  Sum_probs=230.0

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .++++||+++|||++++||++++++|+++|++|++++|+++.+++..++++..+.++.++.+|+++++++.++++++...
T Consensus         6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (256)
T PRK06124          6 RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAE   85 (256)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            56799999999999999999999999999999999999998888888888777778999999999999999999999998


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                      + +++|++|||+|.....++.+.+.++|++.+++|+.+++.+++.++|.|.+++.+++|++||..+..+.++...|+++|
T Consensus        86 ~-~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK  164 (256)
T PRK06124         86 H-GRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAAK  164 (256)
T ss_pred             c-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCCccHhHHHH
Confidence            8 799999999999877888899999999999999999999999999999888889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCc
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ  254 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  254 (270)
                      +++++++++++.|+.+.||+|+.|+||+++|++.......+...+.+....+.+++..++|++++++||+++.++++||+
T Consensus       165 ~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~  244 (256)
T PRK06124        165 QGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAGAAVFLASPAASYVNGH  244 (256)
T ss_pred             HHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCcCCC
Confidence            99999999999999999999999999999999865544344444556666788899999999999999999999999999


Q ss_pred             EEeecCCccccc
Q 024230          255 TVCIDGGFTVNG  266 (270)
Q Consensus       255 ~i~vdgG~~~~~  266 (270)
                      .+.+|||+.+++
T Consensus       245 ~i~~dgg~~~~~  256 (256)
T PRK06124        245 VLAVDGGYSVHF  256 (256)
T ss_pred             EEEECCCccccC
Confidence            999999998753

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-44  Score=304.61  Aligned_cols=242  Identities=27%  Similarity=0.317  Sum_probs=213.4

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      ++++|||+++|||+++|++|+++|++|++++|+++.+++..++++..+ ++.++.+|++|+++++++++++.+.+ +++|
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~~~~~~~~~~~~~-g~id   78 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYG-EVYAVKADLSDKDDLKNLVKEAWELL-GGID   78 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC-CceEEEcCCCCHHHHHHHHHHHHHhc-CCCC
Confidence            379999999999999999999999999999999998888888876544 68889999999999999999999888 7999


Q ss_pred             EEEECCCCCC--CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh-cCCcEEEEecCccccccCCCChhhhhhHHHH
Q 024230          101 IFVNNVGTSV--LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRA-SGAASIVLMSSALGIVSANVGTVYSATKGAM  177 (270)
Q Consensus       101 ~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~-~~~g~ii~iss~~~~~~~~~~~~y~~sKaal  177 (270)
                      ++|||||...  ..++.+.+.++|.+.+.+|+.+++.+++.++|.|.+ ++.|+||++||..+..+.+....|++||+++
T Consensus        79 ~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa~  158 (259)
T PRK08340         79 ALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGL  158 (259)
T ss_pred             EEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHHHHH
Confidence            9999999754  345678889999999999999999999999999864 4578999999999998888899999999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEecCcccCCCCccccC---------Chh-hHHHHhhcCCCCCCCChHhHHHHHHHHhCCC
Q 024230          178 NQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG---------NGK-FVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA  247 (270)
Q Consensus       178 ~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~---------~~~-~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (270)
                      ++|+|+++.|++++||+|++|+||+++|++.+....         .+. ..+......|.+|+++|+|+++++.||+++.
T Consensus       159 ~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~fL~s~~  238 (259)
T PRK08340        159 VQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEELGSLIAFLLSEN  238 (259)
T ss_pred             HHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccCCCCHHHHHHHHHHHcCcc
Confidence            999999999999999999999999999998643210         111 1234455678899999999999999999999


Q ss_pred             CCCccCcEEeecCCccc
Q 024230          248 ASYITGQTVCIDGGFTV  264 (270)
Q Consensus       248 ~~~~~G~~i~vdgG~~~  264 (270)
                      ++++||+++.+|||+..
T Consensus       239 ~~~itG~~i~vdgg~~~  255 (259)
T PRK08340        239 AEYMLGSTIVFDGAMTR  255 (259)
T ss_pred             cccccCceEeecCCcCC
Confidence            99999999999999763

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=3.3e-44  Score=304.85  Aligned_cols=237  Identities=30%  Similarity=0.444  Sum_probs=211.3

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      .+|+||+++||||++|||+++|++|+++|++|++++|+++..           .++.++.+|++++++++++++++.+.+
T Consensus         2 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~-----------~~~~~~~~D~~~~~~i~~~~~~~~~~~   70 (258)
T PRK06398          2 LGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY-----------NDVDYFKVDVSNKEQVIKGIDYVISKY   70 (258)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc-----------CceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            468999999999999999999999999999999999986542           257889999999999999999999988


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKG  175 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKa  175 (270)
                       +++|++|||||.....++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++||+
T Consensus        71 -~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKa  149 (258)
T PRK06398         71 -GRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKH  149 (258)
T ss_pred             -CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCchhhhhHH
Confidence             7999999999998778888999999999999999999999999999998877899999999999999899999999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC-----Chh----hHHHHhhcCCCCCCCChHhHHHHHHHHhCC
Q 024230          176 AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG-----NGK----FVDEVKSRTPMGRLGEPKEVSSLVAFLCMP  246 (270)
Q Consensus       176 al~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~-----~~~----~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (270)
                      ++++|+++++.|+.+. |+|++|+||+++|++......     .+.    ....+....|.+++.+|+|++++++||+++
T Consensus       150 al~~~~~~la~e~~~~-i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l~s~  228 (258)
T PRK06398        150 AVLGLTRSIAVDYAPT-IRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVVAFLASD  228 (258)
T ss_pred             HHHHHHHHHHHHhCCC-CEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcCCCcCHHHHHHHHHHHcCc
Confidence            9999999999999986 999999999999998654321     111    112233456788999999999999999999


Q ss_pred             CCCCccCcEEeecCCcccc
Q 024230          247 AASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       247 ~~~~~~G~~i~vdgG~~~~  265 (270)
                      .+++++|+++.+|||.+..
T Consensus       229 ~~~~~~G~~i~~dgg~~~~  247 (258)
T PRK06398        229 LASFITGECVTVDGGLRAL  247 (258)
T ss_pred             ccCCCCCcEEEECCccccC
Confidence            9999999999999998765

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.2e-44  Score=302.73  Aligned_cols=246  Identities=28%  Similarity=0.391  Sum_probs=217.6

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhc-CCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK-GLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      .|++++|+++|||+++|||++++++|+++|++|++++|++++.++..+++... +.++.++.+|++++++++++++.   
T Consensus         2 ~~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~---   78 (259)
T PRK06125          2 DLHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAE---   78 (259)
T ss_pred             CcCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHH---
Confidence            35789999999999999999999999999999999999999888887777654 55788999999999999888764   


Q ss_pred             HcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhh
Q 024230           94 LFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                       + +++|++|||+|.....++.+.+.++|++++++|+.+++.+++++.|.|.+++.|+||+++|..+..+.+.+..|+++
T Consensus        79 -~-g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  156 (259)
T PRK06125         79 -A-GDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAG  156 (259)
T ss_pred             -h-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCCchHhHHH
Confidence             3 78999999999987788899999999999999999999999999999998877899999999998888888899999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCcccc--------CChhhHHHHhhcCCCCCCCChHhHHHHHHHHhC
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLL--------GNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCM  245 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (270)
                      |+|+++|+++++.|+.++||+|++|+||+++|++.....        ..+.....+....|.+++.+|+|+++.++||++
T Consensus       157 k~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  236 (259)
T PRK06125        157 NAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLVAFLAS  236 (259)
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHHHHHHHHHHHcC
Confidence            999999999999999999999999999999999644321        122223344556788899999999999999999


Q ss_pred             CCCCCccCcEEeecCCcccc
Q 024230          246 PAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       246 ~~~~~~~G~~i~vdgG~~~~  265 (270)
                      +.++++||+++.+|||+...
T Consensus       237 ~~~~~~~G~~i~vdgg~~~~  256 (259)
T PRK06125        237 PRSGYTSGTVVTVDGGISAR  256 (259)
T ss_pred             chhccccCceEEecCCeeec
Confidence            99999999999999998754

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-43  Score=299.14  Aligned_cols=249  Identities=24%  Similarity=0.389  Sum_probs=220.8

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      ||+++|||+++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++++++++++++++.+.+ +++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i   79 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKF-GRI   79 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-CCc
Confidence            6899999999999999999999999999999999988888877777666788999999999999999999999988 799


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEecCccccccCCCChhhhhhHHHHH
Q 024230          100 NIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRAS-GAASIVLMSSALGIVSANVGTVYSATKGAMN  178 (270)
Q Consensus       100 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~ii~iss~~~~~~~~~~~~y~~sKaal~  178 (270)
                      |++|||+|.....++.+.+.++|++++++|+.+++.++++++|+|.++ ..|+||++||..+..+.+....|++||++++
T Consensus        80 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sKaa~~  159 (252)
T PRK07677         80 DALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVL  159 (252)
T ss_pred             cEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHHHHHH
Confidence            999999998666778889999999999999999999999999999765 3589999999999888888899999999999


Q ss_pred             HHHHHHHHHHcc-CCceEEEEecCcccCC-CCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEE
Q 024230          179 QLAKNLACEWAK-DNIRTNSVAPWYIRTP-FTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTV  256 (270)
Q Consensus       179 ~~~~sla~el~~-~~i~v~~v~pG~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i  256 (270)
                      +|+++++.|+.+ +||+|+.|+||+++|+ +.......+...+.+....+.+++.+|+|+++++.||+++.+.+++|+++
T Consensus       160 ~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~  239 (252)
T PRK07677        160 AMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAGLAYFLLSDEAAYINGTCI  239 (252)
T ss_pred             HHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCccccccCCCEE
Confidence            999999999975 6999999999999964 33322223444455566678889999999999999999998899999999


Q ss_pred             eecCCcccccccc
Q 024230          257 CIDGGFTVNGFFF  269 (270)
Q Consensus       257 ~vdgG~~~~~~~~  269 (270)
                      .+|||++..-.+|
T Consensus       240 ~~~gg~~~~~~~~  252 (252)
T PRK07677        240 TMDGGQWLNQYPF  252 (252)
T ss_pred             EECCCeecCCCCC
Confidence            9999998887776

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.7e-43  Score=298.82  Aligned_cols=240  Identities=28%  Similarity=0.376  Sum_probs=214.6

Q ss_pred             CCCCCEEEEecCC--CcHHHHHHHHHHHCCCeEEEeeCC-----------hhHHHHHHHHHHhcCCeEEEEEccCCCHHH
Q 024230           17 SLQGMTALVTGGT--KGLGLAVVEELSMLGATVHTCSRT-----------ETELNECIHHLQMKGLKVTGSVCDVSSRPQ   83 (270)
Q Consensus        17 ~l~gk~vlItG~s--~giG~~la~~l~~~G~~v~l~~r~-----------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   83 (270)
                      .|+||+++||||+  +|||+++|++|+++|++|++++|.           .+.+.+..+++++.+.++.++.+|++++++
T Consensus         3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~   82 (256)
T PRK12859          3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDA   82 (256)
T ss_pred             CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence            5899999999999  499999999999999999987532           233445666677777889999999999999


Q ss_pred             HHHHHHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccccc
Q 024230           84 RQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVS  163 (270)
Q Consensus        84 ~~~~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~  163 (270)
                      ++++++++.+.+ +++|++|||||.....++.+.+.++|++++++|+.+++.+.+.++|+|.+++.|+||++||..+..+
T Consensus        83 i~~~~~~~~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~  161 (256)
T PRK12859         83 PKELLNKVTEQL-GYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGP  161 (256)
T ss_pred             HHHHHHHHHHHc-CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCC
Confidence            999999999888 7999999999997778888999999999999999999999999999998887899999999999998


Q ss_pred             CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHH
Q 024230          164 ANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFL  243 (270)
Q Consensus       164 ~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  243 (270)
                      .+++..|++||+++++|+++++.|+.++||+|++|+||+++|++...     ...+.+....|.++..+|+|+++.+.||
T Consensus       162 ~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~-----~~~~~~~~~~~~~~~~~~~d~a~~~~~l  236 (256)
T PRK12859        162 MVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTE-----EIKQGLLPMFPFGRIGEPKDAARLIKFL  236 (256)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCH-----HHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            89999999999999999999999999999999999999999986432     2233344566788899999999999999


Q ss_pred             hCCCCCCccCcEEeecCCc
Q 024230          244 CMPAASYITGQTVCIDGGF  262 (270)
Q Consensus       244 ~s~~~~~~~G~~i~vdgG~  262 (270)
                      +++.+++++|+++.+|||+
T Consensus       237 ~s~~~~~~~G~~i~~dgg~  255 (256)
T PRK12859        237 ASEEAEWITGQIIHSEGGF  255 (256)
T ss_pred             hCccccCccCcEEEeCCCc
Confidence            9999999999999999995

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=2.3e-43  Score=299.00  Aligned_cols=245  Identities=31%  Similarity=0.451  Sum_probs=219.8

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      ++|+++||||+++||++++++|+++|++|++++|+.+..++...++...+.++.++.+|++++++++++++++.+.+ ++
T Consensus         1 ~~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~   79 (256)
T PRK08643          1 MSKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTF-GD   79 (256)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc-CC
Confidence            37999999999999999999999999999999999988888888887767788899999999999999999999988 79


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCccccccCCCChhhhhhHHHH
Q 024230           99 LNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIVSANVGTVYSATKGAM  177 (270)
Q Consensus        99 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~~~~~~~~~~~y~~sKaal  177 (270)
                      +|++|||||.....++.+.+.++|++++++|+.+++.+++.+.+.|++.+ .++||++||..+..+.++...|+++|+++
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  159 (256)
T PRK08643         80 LNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAV  159 (256)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchhHHHHHHH
Confidence            99999999998778888999999999999999999999999999997764 47999999999999988899999999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEecCcccCCCCccccC--------Chhh-HHHHhhcCCCCCCCChHhHHHHHHHHhCCCC
Q 024230          178 NQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG--------NGKF-VDEVKSRTPMGRLGEPKEVSSLVAFLCMPAA  248 (270)
Q Consensus       178 ~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~--------~~~~-~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  248 (270)
                      +.++++++.|+.++||+|++|+||+++|++......        ...+ ...+....+.+++.+|+|+++.+.||+++.+
T Consensus       160 ~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~L~~~~~  239 (256)
T PRK08643        160 RGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVANCVSFLAGPDS  239 (256)
T ss_pred             HHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCCCCCcCHHHHHHHHHHHhCccc
Confidence            999999999999999999999999999998754321        1111 2234456788899999999999999999999


Q ss_pred             CCccCcEEeecCCccc
Q 024230          249 SYITGQTVCIDGGFTV  264 (270)
Q Consensus       249 ~~~~G~~i~vdgG~~~  264 (270)
                      +++||+++.+|||++.
T Consensus       240 ~~~~G~~i~vdgg~~~  255 (256)
T PRK08643        240 DYITGQTIIVDGGMVF  255 (256)
T ss_pred             cCccCcEEEeCCCeec
Confidence            9999999999999764

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=4.8e-43  Score=298.03  Aligned_cols=247  Identities=31%  Similarity=0.466  Sum_probs=221.1

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh-hHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTE-TELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .++++|+++||||+++||+++|++|+++|++|+++.|+. +..++..++++..+.++.++.+|+++.++++++++.+.+.
T Consensus         3 ~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~   82 (261)
T PRK08936          3 SDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKE   82 (261)
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999988854 4556677777766778899999999999999999999998


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCccccccCCCChhhhhh
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                      + +++|++|||+|.....++.+.+.++|++++++|+.+++.+++.++|+|.+++ .|+||++||..+..+.+.+..|+++
T Consensus        83 ~-g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~s  161 (261)
T PRK08936         83 F-GTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAAS  161 (261)
T ss_pred             c-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcccHHH
Confidence            8 7999999999998778888899999999999999999999999999998764 5899999999999998999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccC
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG  253 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  253 (270)
                      |+|+++|+++++.|+.+.||+|++|+||+++|++.......+..........|.+++.+++|+++.+.||+++.+++++|
T Consensus       162 Kaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G  241 (261)
T PRK08936        162 KGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIPMGYIGKPEEIAAVAAWLASSEASYVTG  241 (261)
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCccC
Confidence            99999999999999999999999999999999986543333333344556678889999999999999999999999999


Q ss_pred             cEEeecCCcc
Q 024230          254 QTVCIDGGFT  263 (270)
Q Consensus       254 ~~i~vdgG~~  263 (270)
                      +.+.+|||.+
T Consensus       242 ~~i~~d~g~~  251 (261)
T PRK08936        242 ITLFADGGMT  251 (261)
T ss_pred             cEEEECCCcc
Confidence            9999999977

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=4.3e-43  Score=297.33  Aligned_cols=246  Identities=29%  Similarity=0.476  Sum_probs=221.7

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .+.+++|+++||||+++||++++++|+++|++|++++|+.+..+...++++..+.++.++.+|+++.++++++++.+.+.
T Consensus         6 ~~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   85 (255)
T PRK06113          6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSK   85 (255)
T ss_pred             ccCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999998888888888776778889999999999999999999888


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                      + +++|++|||+|.....++ +.+.++|++.+++|+.+++.+++++.|+|.+.+.++||++||..+..+.++...|+++|
T Consensus        86 ~-~~~d~li~~ag~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  163 (255)
T PRK06113         86 L-GKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSK  163 (255)
T ss_pred             c-CCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCcchhHHHH
Confidence            8 799999999998665555 68899999999999999999999999999877778999999999999988899999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCc
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ  254 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  254 (270)
                      +|+++|+++++.|+.++||+|+.|+||+++|++..... .+..........+.++..+|+|++++++||+++.+.+++|+
T Consensus       164 ~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~G~  242 (255)
T PRK06113        164 AAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVI-TPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQ  242 (255)
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEeccccccccccccc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCC
Confidence            99999999999999999999999999999999876543 23334445566778889999999999999999999999999


Q ss_pred             EEeecCCcc
Q 024230          255 TVCIDGGFT  263 (270)
Q Consensus       255 ~i~vdgG~~  263 (270)
                      ++.+|||+.
T Consensus       243 ~i~~~gg~~  251 (255)
T PRK06113        243 ILTVSGGGV  251 (255)
T ss_pred             EEEECCCcc
Confidence            999999964

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.6e-44  Score=310.03  Aligned_cols=250  Identities=23%  Similarity=0.267  Sum_probs=201.9

Q ss_pred             cCCCCCCEEEEecCC--CcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHH----------HhcCC-----eEEEEEcc
Q 024230           15 RWSLQGMTALVTGGT--KGLGLAVVEELSMLGATVHTCSRTETELNECIHHL----------QMKGL-----KVTGSVCD   77 (270)
Q Consensus        15 ~~~l~gk~vlItG~s--~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~----------~~~~~-----~~~~~~~D   77 (270)
                      ..+++||+++|||++  +|||+++|+.|+++|++|++.++.+ .+.......          ...+.     ++..+.+|
T Consensus         3 ~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d   81 (299)
T PRK06300          3 KIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDAS   81 (299)
T ss_pred             CcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhhh
Confidence            468899999999996  9999999999999999999977542 111110000          00011     11112233


Q ss_pred             CCCH------------------HHHHHHHHHHHHHcCCcccEEEECCCCCC--CCCCCCCCHHHHHHHHHHhhHHHHHHH
Q 024230           78 VSSR------------------PQRQTLINTVSSLFNGKLNIFVNNVGTSV--LKPTLEYNAEDFSLVMSTNFESAFHLC  137 (270)
Q Consensus        78 ~~~~------------------~~~~~~~~~i~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~  137 (270)
                      +++.                  ++++++++++.+.+ +++|+||||||...  ..++.+.+.++|++++++|+.+++.++
T Consensus        82 ~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~-G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~  160 (299)
T PRK06300         82 FDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDF-GHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLL  160 (299)
T ss_pred             cCCCEEeecccCccccccCCCHHHHHHHHHHHHHHc-CCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence            3333                  36899999999998 89999999998754  568889999999999999999999999


Q ss_pred             HHHHHHHHhcCCcEEEEecCccccccCCCCh-hhhhhHHHHHHHHHHHHHHHcc-CCceEEEEecCcccCCCCccccCCh
Q 024230          138 QLAHPLLRASGAASIVLMSSALGIVSANVGT-VYSATKGAMNQLAKNLACEWAK-DNIRTNSVAPWYIRTPFTEPLLGNG  215 (270)
Q Consensus       138 ~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~-~y~~sKaal~~~~~sla~el~~-~~i~v~~v~pG~v~t~~~~~~~~~~  215 (270)
                      ++++|+|++  .|+||+++|..+..+.+++. .|++||+|+++|+++++.|+++ +|||||+|+||+++|++...+...+
T Consensus       161 ~a~~p~m~~--~G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~~~  238 (299)
T PRK06300        161 SHFGPIMNP--GGSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGFIE  238 (299)
T ss_pred             HHHHHHhhc--CCeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhcccccH
Confidence            999999965  37999999999988888765 8999999999999999999987 5999999999999999875432222


Q ss_pred             hhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCccccccc
Q 024230          216 KFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNGFF  268 (270)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~~  268 (270)
                      ...+......|.++..+|+|+++.+.||+++.+.++||+++.+|||+++.+++
T Consensus       239 ~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~  291 (299)
T PRK06300        239 RMVDYYQDWAPLPEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGANVMGIG  291 (299)
T ss_pred             HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCcceecCC
Confidence            33334455678889999999999999999999999999999999999998875

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.6e-43  Score=298.66  Aligned_cols=245  Identities=32%  Similarity=0.471  Sum_probs=212.0

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .+.++||+++||||++|||+++|++|+++|++|+++.++.+...   +++...  .+.++.+|++|+++++++++++.+.
T Consensus         2 ~~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~---~~l~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~   76 (255)
T PRK06463          2 SMRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEA---KELREK--GVFTIKCDVGNRDQVKKSKEVVEKE   76 (255)
T ss_pred             CCCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHH---HHHHhC--CCeEEEecCCCHHHHHHHHHHHHHH
Confidence            35688999999999999999999999999999998877654322   223322  4678899999999999999999998


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccc-cCCCChhhhhh
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIV-SANVGTVYSAT  173 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~-~~~~~~~y~~s  173 (270)
                      + +++|++|||||.....++.+.+.++|++++++|+.+++.+++.++|+|++++.|+||++||..+.. +.++...|++|
T Consensus        77 ~-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~as  155 (255)
T PRK06463         77 F-GRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAIT  155 (255)
T ss_pred             c-CCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCCCccHhHHH
Confidence            8 799999999999777788889999999999999999999999999999877789999999998875 34667889999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC---hhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCC
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN---GKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY  250 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  250 (270)
                      |+|+++|+++++.|+.+.||+|+.|+||+++|++.......   ....+.+....+.++..+|+|+++.++||+++.+.+
T Consensus       156 Kaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~  235 (255)
T PRK06463        156 KAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPEDIANIVLFLASDDARY  235 (255)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCCcCCCcCHHHHHHHHHHHcChhhcC
Confidence            99999999999999999999999999999999987543222   123344556778899999999999999999998999


Q ss_pred             ccCcEEeecCCcccc
Q 024230          251 ITGQTVCIDGGFTVN  265 (270)
Q Consensus       251 ~~G~~i~vdgG~~~~  265 (270)
                      ++|+++.+|||....
T Consensus       236 ~~G~~~~~dgg~~~~  250 (255)
T PRK06463        236 ITGQVIVADGGRIDN  250 (255)
T ss_pred             CCCCEEEECCCeeec
Confidence            999999999998643

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=5.3e-43  Score=298.43  Aligned_cols=251  Identities=29%  Similarity=0.533  Sum_probs=226.6

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      +.+++++|+++|||++++||++++++|+++|++|++++|+++.+++..+.+...+.++.++.+|++++++++++++++.+
T Consensus         4 ~~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   83 (265)
T PRK07097          4 NLFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEK   83 (265)
T ss_pred             cccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            45788999999999999999999999999999999999999988888888877777899999999999999999999999


Q ss_pred             HcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhh
Q 024230           94 LFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                      .+ +++|++|||+|.....++.+.+.++|++++++|+.+++.+++.++|+|.+.+.++||++||..+..+.+....|+++
T Consensus        84 ~~-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  162 (265)
T PRK07097         84 EV-GVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAA  162 (265)
T ss_pred             hC-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCCccHHHH
Confidence            88 79999999999988888889999999999999999999999999999988878999999999988888889999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC------ChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCC
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG------NGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA  247 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (270)
                      |+++++++++++.|+.++||+|+.|+||+++|++......      ...+.+.+....+.+++.+|+|+++.+.||+++.
T Consensus       163 Kaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  242 (265)
T PRK07097        163 KGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLAGPAVFLASDA  242 (265)
T ss_pred             HHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCCccCCcCHHHHHHHHHHHhCcc
Confidence            9999999999999999999999999999999998755432      1122333445567788999999999999999998


Q ss_pred             CCCccCcEEeecCCcccc
Q 024230          248 ASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       248 ~~~~~G~~i~vdgG~~~~  265 (270)
                      +.+++|+++.+|||+.-.
T Consensus       243 ~~~~~g~~~~~~gg~~~~  260 (265)
T PRK07097        243 SNFVNGHILYVDGGILAY  260 (265)
T ss_pred             cCCCCCCEEEECCCceec
Confidence            999999999999997643

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-43  Score=298.37  Aligned_cols=244  Identities=29%  Similarity=0.465  Sum_probs=217.5

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      +|++++|+++||||++|||++++++|+++|++|++++|+.+.        ...+.++.++.+|++++++++++++.+.+.
T Consensus         1 ~~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   72 (252)
T PRK07856          1 NLDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--------TVDGRPAEFHAADVRDPDQVAALVDAIVER   72 (252)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--------hhcCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999998754        122456888999999999999999999998


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEecCccccccCCCChhhhhh
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRAS-GAASIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                      + +++|++|||||.....++.+.+.++|++.+++|+.+++.+++++.|+|.++ +.|+||++||..+..+.++...|+++
T Consensus        73 ~-~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~s  151 (252)
T PRK07856         73 H-GRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAA  151 (252)
T ss_pred             c-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhHHH
Confidence            8 799999999998877778889999999999999999999999999999875 45899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccC
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG  253 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  253 (270)
                      |+++++|+++++.|+.++ |+++.|+||+++|++.......+...+.+....|.++..+|+|+++.++||+++.++++||
T Consensus       152 K~a~~~l~~~la~e~~~~-i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~L~~~~~~~i~G  230 (252)
T PRK07856        152 KAGLLNLTRSLAVEWAPK-VRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPLGRLATPADIAWACLFLASDLASYVSG  230 (252)
T ss_pred             HHHHHHHHHHHHHHhcCC-eEEEEEEeccccChHHhhhccCHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcccCCccC
Confidence            999999999999999988 9999999999999987654434444445566678889999999999999999998999999


Q ss_pred             cEEeecCCccccccc
Q 024230          254 QTVCIDGGFTVNGFF  268 (270)
Q Consensus       254 ~~i~vdgG~~~~~~~  268 (270)
                      +.+.+|||+....++
T Consensus       231 ~~i~vdgg~~~~~~~  245 (252)
T PRK07856        231 ANLEVHGGGERPAFL  245 (252)
T ss_pred             CEEEECCCcchHHHH
Confidence            999999999876653

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=7.9e-43  Score=295.90  Aligned_cols=249  Identities=27%  Similarity=0.437  Sum_probs=221.8

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeC-ChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSR-TETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      ++|+++||||+++||.+++++|+++|++|+++.+ +.+..++..+++...+.++.++.+|+++.++++++++++.+.+ +
T Consensus         1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~   79 (256)
T PRK12743          1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRL-G   79 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence            4689999999999999999999999999988865 5566777777887778889999999999999999999999998 7


Q ss_pred             cccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCccccccCCCChhhhhhHHH
Q 024230           98 KLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIVSANVGTVYSATKGA  176 (270)
Q Consensus        98 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~~~~~~~~~~~y~~sKaa  176 (270)
                      ++|++|||+|.....++.+.+.++|++++++|+.+++.+++++.++|.+++ .|+||++||..+..+.++...|+++|++
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a  159 (256)
T PRK12743         80 RIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHA  159 (256)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchhHHHHHH
Confidence            999999999997777778899999999999999999999999999997653 5899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEE
Q 024230          177 MNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTV  256 (270)
Q Consensus       177 l~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i  256 (270)
                      +++++++++.++.++||+++.|+||+++|++....  ............+.++..+|+|+++++.||+++.+.+++|+++
T Consensus       160 ~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~  237 (256)
T PRK12743        160 LGGLTKAMALELVEHGILVNAVAPGAIATPMNGMD--DSDVKPDSRPGIPLGRPGDTHEIASLVAWLCSEGASYTTGQSL  237 (256)
T ss_pred             HHHHHHHHHHHhhhhCeEEEEEEeCCccCcccccc--ChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCcCCcEE
Confidence            99999999999999999999999999999986542  2222333444567788999999999999999999999999999


Q ss_pred             eecCCccccccccC
Q 024230          257 CIDGGFTVNGFFFS  270 (270)
Q Consensus       257 ~vdgG~~~~~~~~~  270 (270)
                      .+|||+++.+++|.
T Consensus       238 ~~dgg~~~~~~~~~  251 (256)
T PRK12743        238 IVDGGFMLANPQFN  251 (256)
T ss_pred             EECCCccccCCccc
Confidence            99999999988873

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-42  Score=295.95  Aligned_cols=245  Identities=31%  Similarity=0.455  Sum_probs=220.2

Q ss_pred             CCCCCCEEEEecCCC-cHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHh-cC-CeEEEEEccCCCHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTK-GLGLAVVEELSMLGATVHTCSRTETELNECIHHLQM-KG-LKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        16 ~~l~gk~vlItG~s~-giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~-~~-~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      ..+++|+++||||+| |||+++++.|+++|++|++++|+.+.+++..++++. .+ .++..+.+|++++++++++++++.
T Consensus        13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   92 (262)
T PRK07831         13 GLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAV   92 (262)
T ss_pred             cccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            456789999999985 999999999999999999999999888887777765 23 468889999999999999999998


Q ss_pred             HHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCccccccCCCChhhh
Q 024230           93 SLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIVSANVGTVYS  171 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~~~~~~~~~~~y~  171 (270)
                      +.+ +++|++|||+|.....++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||+++|..+..+.++...|+
T Consensus        93 ~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~  171 (262)
T PRK07831         93 ERL-GRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYA  171 (262)
T ss_pred             HHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCcchH
Confidence            888 7999999999987778888999999999999999999999999999998776 78999999999988888999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCc
Q 024230          172 ATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI  251 (270)
Q Consensus       172 ~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  251 (270)
                      ++|+|+++++++++.|++++||+|+.|+||+++|++..... .....+.+....++++..+|+|+++.++||+++.++++
T Consensus       172 ~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~-~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~s~~~~~i  250 (262)
T PRK07831        172 AAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVT-SAELLDELAAREAFGRAAEPWEVANVIAFLASDYSSYL  250 (262)
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCccccccc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCc
Confidence            99999999999999999999999999999999999875442 23344455667788999999999999999999999999


Q ss_pred             cCcEEeecCCc
Q 024230          252 TGQTVCIDGGF  262 (270)
Q Consensus       252 ~G~~i~vdgG~  262 (270)
                      ||+++.+|++.
T Consensus       251 tG~~i~v~~~~  261 (262)
T PRK07831        251 TGEVVSVSSQH  261 (262)
T ss_pred             CCceEEeCCCC
Confidence            99999999974

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.2e-43  Score=297.96  Aligned_cols=250  Identities=31%  Similarity=0.479  Sum_probs=219.1

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      ..+++|+++||||+++||++++++|+++|++|++++|+++ ..+..+++...+.++.++.+|++++++++++++++.+.+
T Consensus         2 ~~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   80 (263)
T PRK08226          2 GKLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKE   80 (263)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999999999999999999875 334445555556678899999999999999999999988


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccc-cccCCCChhhhhhH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALG-IVSANVGTVYSATK  174 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~-~~~~~~~~~y~~sK  174 (270)
                       +++|++|||+|.....++.+.+.+++++.+++|+.+++.+++++.|+|.+++.++||++||..+ ..+.+++..|+++|
T Consensus        81 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK  159 (263)
T PRK08226         81 -GRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTK  159 (263)
T ss_pred             -CCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCCcchHHHHH
Confidence             7999999999998778888999999999999999999999999999998777789999999887 45667788999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC------ChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCC
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG------NGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAA  248 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  248 (270)
                      +++++++++++.|+.++||+|++|+||+++|+|.+....      .......+....|.+++.+|+|+++.+.||+++.+
T Consensus       160 ~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~~  239 (263)
T PRK08226        160 AAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAFLASDES  239 (263)
T ss_pred             HHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCchh
Confidence            999999999999999999999999999999998765421      12233445556788899999999999999999999


Q ss_pred             CCccCcEEeecCCcccccc
Q 024230          249 SYITGQTVCIDGGFTVNGF  267 (270)
Q Consensus       249 ~~~~G~~i~vdgG~~~~~~  267 (270)
                      .+++|+++.+|||.+...+
T Consensus       240 ~~~~g~~i~~dgg~~~~~~  258 (263)
T PRK08226        240 SYLTGTQNVIDGGSTLPET  258 (263)
T ss_pred             cCCcCceEeECCCcccCce
Confidence            9999999999999886643

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-42  Score=294.75  Aligned_cols=245  Identities=32%  Similarity=0.536  Sum_probs=217.8

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      +++++||+++||||+++||.++|++|+++|++|++++|+++.. +...++.  +..+..+.+|++++++++++++++.+.
T Consensus        10 ~~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   86 (255)
T PRK06841         10 AFDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA-EVAAQLL--GGNAKGLVCDVSDSQSVEAAVAAVISA   86 (255)
T ss_pred             hcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            4679999999999999999999999999999999999987643 3333332  345778999999999999999999998


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                      + +++|++|||+|.....++.+.+.+++++++++|+.+++++++++.|+|.+++.++||++||..+..+.+....|+++|
T Consensus        87 ~-~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  165 (255)
T PRK06841         87 F-GRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASK  165 (255)
T ss_pred             h-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCCchHHHHH
Confidence            8 799999999999877788889999999999999999999999999999887789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCc
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ  254 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  254 (270)
                      +++++++++++.|++++||+|+.|+||+++|++...... ....+......|.+++.+|+|+++++++|+++.+.+++|+
T Consensus       166 ~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~  244 (255)
T PRK06841        166 AGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWA-GEKGERAKKLIPAGRFAYPEEIAAAALFLASDAAAMITGE  244 (255)
T ss_pred             HHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccc-hhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCC
Confidence            999999999999999999999999999999998754322 2233445566788899999999999999999999999999


Q ss_pred             EEeecCCccc
Q 024230          255 TVCIDGGFTV  264 (270)
Q Consensus       255 ~i~vdgG~~~  264 (270)
                      ++.+|||+++
T Consensus       245 ~i~~dgg~~~  254 (255)
T PRK06841        245 NLVIDGGYTI  254 (255)
T ss_pred             EEEECCCccC
Confidence            9999999875

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=1.9e-43  Score=300.65  Aligned_cols=246  Identities=30%  Similarity=0.418  Sum_probs=209.2

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      |++++|+++||||++|||+++|++|+++|++|++++|+.+.++++...   .+.++.++.+|+++.++++++++++.+.+
T Consensus         1 m~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (262)
T TIGR03325         1 MRLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA---HGDAVVGVEGDVRSLDDHKEAVARCVAAF   77 (262)
T ss_pred             CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh---cCCceEEEEeccCCHHHHHHHHHHHHHHh
Confidence            468899999999999999999999999999999999998776655432   24578889999999999999999999888


Q ss_pred             CCcccEEEECCCCCC-CCCCCCCCH----HHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhh
Q 024230           96 NGKLNIFVNNVGTSV-LKPTLEYNA----EDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVY  170 (270)
Q Consensus        96 ~~~id~li~~ag~~~-~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y  170 (270)
                       +++|++|||||... ..++.+.+.    ++|++++++|+.+++.++++++|+|.+++ |++|+++|..+..+.++...|
T Consensus        78 -g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~~sS~~~~~~~~~~~~Y  155 (262)
T TIGR03325        78 -GKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASR-GSVIFTISNAGFYPNGGGPLY  155 (262)
T ss_pred             -CCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcC-CCEEEEeccceecCCCCCchh
Confidence             79999999999753 234444443    57999999999999999999999997654 899999999999888888899


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCcccc---CCh-----hhHHHHhhcCCCCCCCChHhHHHHHHH
Q 024230          171 SATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLL---GNG-----KFVDEVKSRTPMGRLGEPKEVSSLVAF  242 (270)
Q Consensus       171 ~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~---~~~-----~~~~~~~~~~~~~~~~~~~dva~~~~~  242 (270)
                      ++||+|+++|+++++.|++++ |+||+|+||+++|+|.....   ...     ...+......|.+|+.+|+|+++++.|
T Consensus       156 ~~sKaa~~~l~~~la~e~~~~-irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~  234 (262)
T TIGR03325       156 TAAKHAVVGLVKELAFELAPY-VRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYTGAYVF  234 (262)
T ss_pred             HHHHHHHHHHHHHHHHhhccC-eEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCCCCCCChHHhhhheee
Confidence            999999999999999999987 99999999999999865321   010     112223445789999999999999999


Q ss_pred             HhCC-CCCCccCcEEeecCCcccccc
Q 024230          243 LCMP-AASYITGQTVCIDGGFTVNGF  267 (270)
Q Consensus       243 l~s~-~~~~~~G~~i~vdgG~~~~~~  267 (270)
                      |+++ .+.++||+++.+|||+.+.++
T Consensus       235 l~s~~~~~~~tG~~i~vdgg~~~~~~  260 (262)
T TIGR03325       235 FATRGDTVPATGAVLNYDGGMGVRGF  260 (262)
T ss_pred             eecCCCcccccceEEEecCCeeeccc
Confidence            9997 467899999999999988765

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=9.7e-43  Score=299.03  Aligned_cols=254  Identities=26%  Similarity=0.326  Sum_probs=216.0

Q ss_pred             cccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           13 QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        13 ~~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      ....+++||+++||||+++||++++++|+++|++|++++|+++..++..+++. .+.++.++.+|++|+++++++++++.
T Consensus        11 ~~~~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~   89 (280)
T PLN02253         11 LPSQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLG-GEPNVCFFHCDVTVEDDVSRAVDFTV   89 (280)
T ss_pred             ccccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhc-CCCceEEEEeecCCHHHHHHHHHHHH
Confidence            33467899999999999999999999999999999999999887776666653 24578899999999999999999999


Q ss_pred             HHcCCcccEEEECCCCCCC--CCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhh
Q 024230           93 SLFNGKLNIFVNNVGTSVL--KPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVY  170 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y  170 (270)
                      +.+ +++|++|||||....  .++.+.+.++|++++++|+.+++.+++++.|+|.+++.|+||+++|..+..+.++...|
T Consensus        90 ~~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y  168 (280)
T PLN02253         90 DKF-GTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAY  168 (280)
T ss_pred             HHh-CCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCCccc
Confidence            988 799999999998542  45778999999999999999999999999999988777899999999998888888899


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChh----hHH----HHhhcCC-CCCCCChHhHHHHHH
Q 024230          171 SATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGK----FVD----EVKSRTP-MGRLGEPKEVSSLVA  241 (270)
Q Consensus       171 ~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~----~~~----~~~~~~~-~~~~~~~~dva~~~~  241 (270)
                      ++||+++++++++++.|++++||+|+.++||+++|++.........    ...    ......+ .++...|+|+++++.
T Consensus       169 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~dva~~~~  248 (280)
T PLN02253        169 TGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVDDVANAVL  248 (280)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCCcCCCCCHHHHHHHHH
Confidence            9999999999999999999999999999999999997643222111    111    1111222 245678999999999


Q ss_pred             HHhCCCCCCccCcEEeecCCccccccc
Q 024230          242 FLCMPAASYITGQTVCIDGGFTVNGFF  268 (270)
Q Consensus       242 ~l~s~~~~~~~G~~i~vdgG~~~~~~~  268 (270)
                      ||+++.+.+++|+++.+|||+..+-..
T Consensus       249 ~l~s~~~~~i~G~~i~vdgG~~~~~~~  275 (280)
T PLN02253        249 FLASDEARYISGLNLMIDGGFTCTNHS  275 (280)
T ss_pred             hhcCcccccccCcEEEECCchhhccch
Confidence            999999999999999999998765443

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-42  Score=294.04  Aligned_cols=246  Identities=26%  Similarity=0.391  Sum_probs=217.8

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      +|.+++|+++|||++++||.++|++|+++|++|++++|+.+..++..+++   +.++.++.+|++|+++++.+++++.+.
T Consensus         1 ~~~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (257)
T PRK07067          1 MMRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI---GPAAIAVSLDVTRQDSIDRIVAAAVER   77 (257)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            35688999999999999999999999999999999999988877665544   346888999999999999999999998


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCccccccCCCChhhhhh
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                      + +++|++|||+|.....++.+.+.+++++++++|+.+++.+++++.++|.+++ +++||++||..+..+.+....|++|
T Consensus        78 ~-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  156 (257)
T PRK07067         78 F-GGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCAT  156 (257)
T ss_pred             c-CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCchhhhh
Confidence            8 7999999999988778888999999999999999999999999999997653 4799999999988888999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC---------ChhhHHHHhhcCCCCCCCChHhHHHHHHHHh
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG---------NGKFVDEVKSRTPMGRLGEPKEVSSLVAFLC  244 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  244 (270)
                      |++++.+++++++|+.++||+|+.|.||+++|++......         ............|+++..+|+|+++++.||+
T Consensus       157 K~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  236 (257)
T PRK07067        157 KAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALFLA  236 (257)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHHHHHHh
Confidence            9999999999999999999999999999999997654311         1122233445678899999999999999999


Q ss_pred             CCCCCCccCcEEeecCCccc
Q 024230          245 MPAASYITGQTVCIDGGFTV  264 (270)
Q Consensus       245 s~~~~~~~G~~i~vdgG~~~  264 (270)
                      ++.+.+++|+++.+|||..+
T Consensus       237 s~~~~~~~g~~~~v~gg~~~  256 (257)
T PRK07067        237 SADADYIVAQTYNVDGGNWM  256 (257)
T ss_pred             CcccccccCcEEeecCCEeC
Confidence            99999999999999999765

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.3e-43  Score=303.45  Aligned_cols=242  Identities=23%  Similarity=0.309  Sum_probs=201.1

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh----------hHHHHHHHHHHhcCCeEEEEEccCCCHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTE----------TELNECIHHLQMKGLKVTGSVCDVSSRPQR   84 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~----------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   84 (270)
                      +.+|+||+++||||++|||+++|++|+++|++|++++|+.          +.+++..+++...+.++.++.+|+++++++
T Consensus         3 ~~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v   82 (305)
T PRK08303          3 MKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQV   82 (305)
T ss_pred             CcCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence            4568999999999999999999999999999999999973          345566666766667788999999999999


Q ss_pred             HHHHHHHHHHcCCcccEEEECC-CCCC----CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcc
Q 024230           85 QTLINTVSSLFNGKLNIFVNNV-GTSV----LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSAL  159 (270)
Q Consensus        85 ~~~~~~i~~~~~~~id~li~~a-g~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~  159 (270)
                      +++++++.+.+ +++|++|||| |...    ..++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..
T Consensus        83 ~~~~~~~~~~~-g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~  161 (305)
T PRK08303         83 RALVERIDREQ-GRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGT  161 (305)
T ss_pred             HHHHHHHHHHc-CCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCcc
Confidence            99999999998 7999999999 7531    2567788999999999999999999999999999887779999999976


Q ss_pred             ccc---cCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC-ChhhHHHHhhcCC-CCCCCChH
Q 024230          160 GIV---SANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG-NGKFVDEVKSRTP-MGRLGEPK  234 (270)
Q Consensus       160 ~~~---~~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~  234 (270)
                      +..   +.+....|++||+|+.+|+++|+.|+++.|||||+|+||+++|+|...... .+..........| .++..+|+
T Consensus       162 ~~~~~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~p~~~~~~~pe  241 (305)
T PRK08303        162 AEYNATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRDALAKEPHFAISETPR  241 (305)
T ss_pred             ccccCcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccchhhhhccccccccCCCHH
Confidence            643   233567899999999999999999999999999999999999998533211 1111111112334 46677899


Q ss_pred             hHHHHHHHHhCCC-CCCccCcEEe
Q 024230          235 EVSSLVAFLCMPA-ASYITGQTVC  257 (270)
Q Consensus       235 dva~~~~~l~s~~-~~~~~G~~i~  257 (270)
                      |++++++||+++. ..++||+++.
T Consensus       242 evA~~v~fL~s~~~~~~itG~~l~  265 (305)
T PRK08303        242 YVGRAVAALAADPDVARWNGQSLS  265 (305)
T ss_pred             HHHHHHHHHHcCcchhhcCCcEEE
Confidence            9999999999987 4689999876

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-42  Score=291.97  Aligned_cols=244  Identities=29%  Similarity=0.403  Sum_probs=210.5

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      ..+++|+++||||++|||+++|++|+++|++|++++|++. .++..+++...+.++.++.+|+++.++++++++++.+.+
T Consensus         4 ~~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (260)
T PRK12823          4 QRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAF   82 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999999999999999999853 445666666667788899999999999999999999888


Q ss_pred             CCcccEEEECCCCC-CCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           96 NGKLNIFVNNVGTS-VLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        96 ~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                       +++|++|||||.. ...++.+.+.++|++.+++|+.+++.+++.++|+|.+++.|+||++||..++.  +....|++||
T Consensus        83 -~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--~~~~~Y~~sK  159 (260)
T PRK12823         83 -GRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRG--INRVPYSAAK  159 (260)
T ss_pred             -CCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccC--CCCCccHHHH
Confidence             7999999999964 35678889999999999999999999999999999888778999999987652  3456899999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccc------cC-C----hhhHHHHhhcCCCCCCCChHhHHHHHHHH
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPL------LG-N----GKFVDEVKSRTPMGRLGEPKEVSSLVAFL  243 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~------~~-~----~~~~~~~~~~~~~~~~~~~~dva~~~~~l  243 (270)
                      +|+++|+++++.|++++||+|++|+||+++|++....      .. .    +...++.....|+++..+|+|+++++.||
T Consensus       160 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  239 (260)
T PRK12823        160 GGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTIDEQVAAILFL  239 (260)
T ss_pred             HHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcccCCCHHHHHHHHHHH
Confidence            9999999999999999999999999999999863211      00 0    12233344567888999999999999999


Q ss_pred             hCCCCCCccCcEEeecCCcc
Q 024230          244 CMPAASYITGQTVCIDGGFT  263 (270)
Q Consensus       244 ~s~~~~~~~G~~i~vdgG~~  263 (270)
                      +++.+.+++|+.+.+|||..
T Consensus       240 ~s~~~~~~~g~~~~v~gg~~  259 (260)
T PRK12823        240 ASDEASYITGTVLPVGGGDL  259 (260)
T ss_pred             cCcccccccCcEEeecCCCC
Confidence            99989999999999999964

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=3.3e-42  Score=319.83  Aligned_cols=245  Identities=34%  Similarity=0.584  Sum_probs=218.0

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      ..+.||++|||||++|||+++|++|+++|++|++++|+++.+++..+++   +.++..+.+|++|+++++++++++.+.+
T Consensus       265 ~~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~  341 (520)
T PRK06484        265 LAESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL---GDEHLSVQADITDEAAVESAFAQIQARW  341 (520)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEccCCCHHHHHHHHHHHHHHc
Confidence            4568999999999999999999999999999999999988877766544   4567789999999999999999999988


Q ss_pred             CCcccEEEECCCCCC-CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           96 NGKLNIFVNNVGTSV-LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        96 ~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                       +++|++|||||... ..++.+.+.++|++++++|+.+++.+++.++|+|  ++.|+||++||..+..+.++...|++||
T Consensus       342 -g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~--~~~g~iv~isS~~~~~~~~~~~~Y~asK  418 (520)
T PRK06484        342 -GRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLM--SQGGVIVNLGSIASLLALPPRNAYCASK  418 (520)
T ss_pred             -CCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHh--ccCCEEEEECchhhcCCCCCCchhHHHH
Confidence             89999999999863 4577889999999999999999999999999999  3458999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC-hhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccC
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN-GKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG  253 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  253 (270)
                      +++++|+++++.|+.++||+|++|+||+++|+|....... ....+.+....|.+++.+|+|+++.++||+++.++++||
T Consensus       419 aal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~s~~~~~~~G  498 (520)
T PRK06484        419 AAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLGRLGDPEEVAEAIAFLASPAASYVNG  498 (520)
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccC
Confidence            9999999999999999999999999999999987654322 223344556778889999999999999999998999999


Q ss_pred             cEEeecCCccccc
Q 024230          254 QTVCIDGGFTVNG  266 (270)
Q Consensus       254 ~~i~vdgG~~~~~  266 (270)
                      +++.+|||+...+
T Consensus       499 ~~i~vdgg~~~~~  511 (520)
T PRK06484        499 ATLTVDGGWTAFG  511 (520)
T ss_pred             cEEEECCCccCCC
Confidence            9999999986543

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.8e-42  Score=290.59  Aligned_cols=249  Identities=27%  Similarity=0.464  Sum_probs=218.7

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      .+|++++|+++||||+++||.+++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++++++++++++++.+
T Consensus         3 ~~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~   82 (264)
T PRK07576          3 TMFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIAD   82 (264)
T ss_pred             ccccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999998888777777776666788899999999999999999988


Q ss_pred             HcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhh
Q 024230           94 LFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                      .+ +++|++|||||.....++.+.+.++|++.+++|+.+++.+++++.|+|+++ +|+||++||..+..+.+++..|+++
T Consensus        83 ~~-~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-~g~iv~iss~~~~~~~~~~~~Y~as  160 (264)
T PRK07576         83 EF-GPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP-GASIIQISAPQAFVPMPMQAHVCAA  160 (264)
T ss_pred             Hc-CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCEEEEECChhhccCCCCccHHHHH
Confidence            88 799999999998766778889999999999999999999999999999765 4899999999988888899999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCccc-CCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCcc
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIR-TPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT  252 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  252 (270)
                      |+++++|+++++.|+.++||+|+.|+||+++ |+......+............|.++...|+|+++.+.||+++...+++
T Consensus       161 K~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  240 (264)
T PRK07576        161 KAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPLKRNGTKQDIANAALFLASDMASYIT  240 (264)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhcCcc
Confidence            9999999999999999999999999999997 553333333223223333446778889999999999999998889999


Q ss_pred             CcEEeecCCccc
Q 024230          253 GQTVCIDGGFTV  264 (270)
Q Consensus       253 G~~i~vdgG~~~  264 (270)
                      |+++.+|||+.+
T Consensus       241 G~~~~~~gg~~~  252 (264)
T PRK07576        241 GVVLPVDGGWSL  252 (264)
T ss_pred             CCEEEECCCccc
Confidence            999999999864

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.2e-41  Score=287.65  Aligned_cols=246  Identities=27%  Similarity=0.369  Sum_probs=210.0

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeC-ChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSR-TETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      |.+++|+++||||+++||+++|+.|+++|++|+++.+ +++..+.+..++   +.++.++.+|++++++++++++++.+.
T Consensus         1 ~~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (253)
T PRK08642          1 MQISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL---GDRAIALQADVTDREQVQAMFATATEH   77 (253)
T ss_pred             CCCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            5678999999999999999999999999999988755 444444443333   357888999999999999999999888


Q ss_pred             cCCcccEEEECCCCCC------CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCCh
Q 024230           95 FNGKLNIFVNNVGTSV------LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGT  168 (270)
Q Consensus        95 ~~~~id~li~~ag~~~------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~  168 (270)
                      ++.++|++|||||...      ..++.+.+.++|++.+++|+.+++.+++++.|+|.+.+.++||+++|..+..+.+...
T Consensus        78 ~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  157 (253)
T PRK08642         78 FGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVPYH  157 (253)
T ss_pred             hCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCcc
Confidence            8334999999998631      2457788999999999999999999999999999887779999999988777777778


Q ss_pred             hhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCC
Q 024230          169 VYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAA  248 (270)
Q Consensus       169 ~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  248 (270)
                      .|++||++++++++++++|++++||+|++|+||+++|+...... .+...+......|.+++.+|+|+++++.||+++.+
T Consensus       158 ~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  236 (253)
T PRK08642        158 DYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAAT-PDEVFDLIAATTPLRKVTTPQEFADAVLFFASPWA  236 (253)
T ss_pred             chHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccC-CHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCchh
Confidence            99999999999999999999999999999999999998654332 23334445567788999999999999999999989


Q ss_pred             CCccCcEEeecCCcccc
Q 024230          249 SYITGQTVCIDGGFTVN  265 (270)
Q Consensus       249 ~~~~G~~i~vdgG~~~~  265 (270)
                      .+++|+++.+|||+..+
T Consensus       237 ~~~~G~~~~vdgg~~~~  253 (253)
T PRK08642        237 RAVTGQNLVVDGGLVMN  253 (253)
T ss_pred             cCccCCEEEeCCCeecC
Confidence            99999999999998653

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.5e-42  Score=290.97  Aligned_cols=197  Identities=29%  Similarity=0.347  Sum_probs=183.4

Q ss_pred             cccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcC-C-eEEEEEccCCCHHHHHHHHHH
Q 024230           13 QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG-L-KVTGSVCDVSSRPQRQTLINT   90 (270)
Q Consensus        13 ~~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~-~-~~~~~~~D~~~~~~~~~~~~~   90 (270)
                      .+++++.||+|+|||||+|||.++|.+|+++|++++++.|+.++++.+.++|++.+ . +++++++|++|++++++++++
T Consensus         5 ~~~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~   84 (282)
T KOG1205|consen    5 LFMERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEW   84 (282)
T ss_pred             ccHHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHH
Confidence            45679999999999999999999999999999999999999999999988887753 3 499999999999999999999


Q ss_pred             HHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhh
Q 024230           91 VSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVY  170 (270)
Q Consensus        91 i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y  170 (270)
                      +..+| |++|+||||||......+.+.+.++++..|++|++|++.++++++|+|++++.|+||+++|++|+.+.|....|
T Consensus        85 ~~~~f-g~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~Y  163 (282)
T KOG1205|consen   85 AIRHF-GRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSIY  163 (282)
T ss_pred             HHHhc-CCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCccccc
Confidence            99999 89999999999988667778899999999999999999999999999999988999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCC--ceEEEEecCcccCCCCccc
Q 024230          171 SATKGAMNQLAKNLACEWAKDN--IRTNSVAPWYIRTPFTEPL  211 (270)
Q Consensus       171 ~~sKaal~~~~~sla~el~~~~--i~v~~v~pG~v~t~~~~~~  211 (270)
                      ++||+|+.+|+.+|+.|+.+.+  |++ .|+||+|+|++....
T Consensus       164 ~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~~  205 (282)
T KOG1205|consen  164 SASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGKE  205 (282)
T ss_pred             chHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccchh
Confidence            9999999999999999999987  666 999999999976554

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-42  Score=295.16  Aligned_cols=240  Identities=32%  Similarity=0.419  Sum_probs=207.7

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .++|++|+++|||+++|||++++++|+++|++|++++++++..+         ..++.++.+|++++++++++++++.+.
T Consensus         4 ~~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~---------~~~~~~~~~D~~~~~~~~~~~~~~~~~   74 (266)
T PRK06171          4 WLNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ---------HENYQFVPTDVSSAEEVNHTVAEIIEK   74 (266)
T ss_pred             cccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc---------cCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999876532         236778999999999999999999998


Q ss_pred             cCCcccEEEECCCCCCCC---------CCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCC
Q 024230           95 FNGKLNIFVNNVGTSVLK---------PTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSAN  165 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~---------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~  165 (270)
                      + +++|++|||||.....         ++.+.+.++|++++++|+.+++.+++++.|+|.+++.++||++||..+..+.+
T Consensus        75 ~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~  153 (266)
T PRK06171         75 F-GRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSE  153 (266)
T ss_pred             c-CCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCC
Confidence            8 7999999999975432         23467899999999999999999999999999888778999999999999989


Q ss_pred             CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCccc-CCCCccccC----------ChhhHHHHhh--cCCCCCCCC
Q 024230          166 VGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIR-TPFTEPLLG----------NGKFVDEVKS--RTPMGRLGE  232 (270)
Q Consensus       166 ~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~-t~~~~~~~~----------~~~~~~~~~~--~~~~~~~~~  232 (270)
                      +...|++||+++++|+++++.|++++||+|+.|+||+++ |++......          .....+....  ..|++++..
T Consensus       154 ~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~  233 (266)
T PRK06171        154 GQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPLGRSGK  233 (266)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccccCCCCCC
Confidence            999999999999999999999999999999999999997 665432110          0112222333  578899999


Q ss_pred             hHhHHHHHHHHhCCCCCCccCcEEeecCCccc
Q 024230          233 PKEVSSLVAFLCMPAASYITGQTVCIDGGFTV  264 (270)
Q Consensus       233 ~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~  264 (270)
                      |+|+++++.||+++.++++||++|.+|||++.
T Consensus       234 ~~eva~~~~fl~s~~~~~itG~~i~vdgg~~~  265 (266)
T PRK06171        234 LSEVADLVCYLLSDRASYITGVTTNIAGGKTR  265 (266)
T ss_pred             HHHhhhheeeeeccccccceeeEEEecCcccC
Confidence            99999999999999999999999999999763

>PRK06701 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-41  Score=291.15  Aligned_cols=248  Identities=33%  Similarity=0.465  Sum_probs=218.8

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChh-HHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTET-ELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      +.+++||++||||++++||.+++++|+++|++|++++|+++ ..+...+.++..+.++.++.+|+++.++++++++++.+
T Consensus        41 ~~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~  120 (290)
T PRK06701         41 SGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVR  120 (290)
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999999864 44555666666677889999999999999999999999


Q ss_pred             HcCCcccEEEECCCCCC-CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhh
Q 024230           94 LFNGKLNIFVNNVGTSV-LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSA  172 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~  172 (270)
                      .+ +++|++|||||... ..++.+.+.++|++++++|+.+++.+++++.+.|++  .++||++||..++.+.++...|++
T Consensus       121 ~~-~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~~  197 (290)
T PRK06701        121 EL-GRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ--GSAIINTGSITGYEGNETLIDYSA  197 (290)
T ss_pred             Hc-CCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh--CCeEEEEecccccCCCCCcchhHH
Confidence            88 79999999999864 456788999999999999999999999999999954  379999999999998888999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCcc
Q 024230          173 TKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT  252 (270)
Q Consensus       173 sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  252 (270)
                      ||+|++.++++++.++.++||+|++|+||+++|++..... .+...+.+....+.++...++|++++++||+++.+.+++
T Consensus       198 sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~ll~~~~~~~~  276 (290)
T PRK06701        198 TKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDF-DEEKVSQFGSNTPMQRPGQPEELAPAYVFLASPDSSYIT  276 (290)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCccccccc-CHHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCcccCCcc
Confidence            9999999999999999999999999999999999765432 233344555666788899999999999999999999999


Q ss_pred             CcEEeecCCccccc
Q 024230          253 GQTVCIDGGFTVNG  266 (270)
Q Consensus       253 G~~i~vdgG~~~~~  266 (270)
                      |+.+.+|||..+++
T Consensus       277 G~~i~idgg~~~~~  290 (290)
T PRK06701        277 GQMLHVNGGVIVNG  290 (290)
T ss_pred             CcEEEeCCCcccCC
Confidence            99999999987653

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-41  Score=291.97  Aligned_cols=233  Identities=25%  Similarity=0.376  Sum_probs=199.7

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      .+|+++|||+ +|||+++|++|+ +|++|++++|+++.+++..+++...+.++.++.+|++|+++++++++++ +.+ ++
T Consensus         1 ~~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~~-g~   76 (275)
T PRK06940          1 MKEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QTL-GP   76 (275)
T ss_pred             CCCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-Hhc-CC
Confidence            3689999998 699999999996 8999999999988888887777766678889999999999999999988 456 79


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC--------------
Q 024230           99 LNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA--------------  164 (270)
Q Consensus        99 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~--------------  164 (270)
                      +|++|||||...       ..++|++++++|+.+++++++.+.|+|.++  |++|+++|..+..+.              
T Consensus        77 id~li~nAG~~~-------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--g~iv~isS~~~~~~~~~~~~~~~~~~~~~  147 (275)
T PRK06940         77 VTGLVHTAGVSP-------SQASPEAILKVDLYGTALVLEEFGKVIAPG--GAGVVIASQSGHRLPALTAEQERALATTP  147 (275)
T ss_pred             CCEEEECCCcCC-------chhhHHHHHHHhhHHHHHHHHHHHHHHhhC--CCEEEEEecccccCcccchhhhccccccc
Confidence            999999999752       236799999999999999999999999653  678999998876542              


Q ss_pred             ----------------CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC-C-hhhHHHHhhcCC
Q 024230          165 ----------------NVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG-N-GKFVDEVKSRTP  226 (270)
Q Consensus       165 ----------------~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~-~-~~~~~~~~~~~~  226 (270)
                                      +.+..|++||+|+++++++++.|++++|||||+|+||+++|++...... . +...+......|
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p  227 (275)
T PRK06940        148 TEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSP  227 (275)
T ss_pred             cccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCC
Confidence                            2467899999999999999999999999999999999999998754221 1 122334455678


Q ss_pred             CCCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCccc
Q 024230          227 MGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTV  264 (270)
Q Consensus       227 ~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~  264 (270)
                      .++..+|+|++++++||+++.++++||+.+.+|||+..
T Consensus       228 ~~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg~~~  265 (275)
T PRK06940        228 AGRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGATA  265 (275)
T ss_pred             cccCCCHHHHHHHHHHHcCcccCcccCceEEEcCCeEE
Confidence            89999999999999999999999999999999999754

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=2.4e-41  Score=284.89  Aligned_cols=244  Identities=24%  Similarity=0.385  Sum_probs=217.8

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEe-eCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTC-SRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      |++|+++|||++++||+++|++|+++|++|++. .++.+..++..+++...+.++..+.+|++|.++++++++++.+.+ 
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   79 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEV-   79 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh-
Confidence            578999999999999999999999999998874 455566666677776667788889999999999999999999888 


Q ss_pred             CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHH
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGA  176 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaa  176 (270)
                      +++|++|||||.....++.+.+.++|++++++|+.+++.+++++.|+|.+++.++||++||..+..+.++...|+++|++
T Consensus        80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sK~a  159 (246)
T PRK12938         80 GEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAG  159 (246)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCCChhHHHHHHH
Confidence            79999999999987778889999999999999999999999999999988877899999999998888899999999999


Q ss_pred             HHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEE
Q 024230          177 MNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTV  256 (270)
Q Consensus       177 l~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i  256 (270)
                      ++.++++++.|+.+.||+++.|+||+++|++.+..  .+...+......+..+..+++|+++.++||+++.+.+++|+++
T Consensus       160 ~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~g~~~  237 (246)
T PRK12938        160 IHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI--RPDVLEKIVATIPVRRLGSPDEIGSIVAWLASEESGFSTGADF  237 (246)
T ss_pred             HHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhc--ChHHHHHHHhcCCccCCcCHHHHHHHHHHHcCcccCCccCcEE
Confidence            99999999999999999999999999999987654  2333444445567788899999999999999998999999999


Q ss_pred             eecCCccc
Q 024230          257 CIDGGFTV  264 (270)
Q Consensus       257 ~vdgG~~~  264 (270)
                      .+|||..+
T Consensus       238 ~~~~g~~~  245 (246)
T PRK12938        238 SLNGGLHM  245 (246)
T ss_pred             EECCcccC
Confidence            99999754

>PRK12939 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-41  Score=284.02  Aligned_cols=249  Identities=30%  Similarity=0.401  Sum_probs=225.4

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      +.++++|+++|||++++||++++++|+++|++|++++|++++.+...+.++..+.++.++.+|++++++++++++++.+.
T Consensus         2 ~~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   81 (250)
T PRK12939          2 ASNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAA   81 (250)
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999999999888888888766678999999999999999999999988


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                      + +++|++|||+|.....++.+.+.+++++.+++|+.+++.+++++.|+|.+++.|++|++||..+..+.+....|+++|
T Consensus        82 ~-~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK  160 (250)
T PRK12939         82 L-GGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASK  160 (250)
T ss_pred             c-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCcchHHHHH
Confidence            8 799999999999877888889999999999999999999999999999888788999999999998888889999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCc
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ  254 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  254 (270)
                      ++++++++.++.++.+.+|+++.|+||+++|++...... ......+....+.+++.+++|+++++++++++..++++|+
T Consensus       161 ~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  239 (250)
T PRK12939        161 GAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPA-DERHAYYLKGRALERLQVPDDVAGAVLFLLSDAARFVTGQ  239 (250)
T ss_pred             HHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCC-hHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCccCc
Confidence            999999999999999999999999999999998765432 2344445556678889999999999999999888899999


Q ss_pred             EEeecCCcccc
Q 024230          255 TVCIDGGFTVN  265 (270)
Q Consensus       255 ~i~vdgG~~~~  265 (270)
                      .|.+|||.+++
T Consensus       240 ~i~~~gg~~~~  250 (250)
T PRK12939        240 LLPVNGGFVMN  250 (250)
T ss_pred             EEEECCCcccC
Confidence            99999998764

>PRK07890 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-41  Score=288.15  Aligned_cols=247  Identities=28%  Similarity=0.344  Sum_probs=219.7

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      |.+++|+++||||+++||+++|++|+++|++|++++|+++..++..++++..+.++.++.+|++++++++++++++.+.+
T Consensus         1 ~~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (258)
T PRK07890          1 MLLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERF   80 (258)
T ss_pred             CccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999999999998888888887767788999999999999999999998888


Q ss_pred             CCcccEEEECCCCCC-CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           96 NGKLNIFVNNVGTSV-LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        96 ~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                       +++|++|||||... ..++.+.+.++|++++++|+.+++.+++++.++|.+.+ ++||++||..+..+.+++..|+++|
T Consensus        81 -g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~ii~~sS~~~~~~~~~~~~Y~~sK  158 (258)
T PRK07890         81 -GRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESG-GSIVMINSMVLRHSQPKYGAYKMAK  158 (258)
T ss_pred             -CCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CEEEEEechhhccCCCCcchhHHHH
Confidence             79999999999854 46777889999999999999999999999999997664 7999999999999889999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC---------ChhhHHHHhhcCCCCCCCChHhHHHHHHHHhC
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG---------NGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCM  245 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (270)
                      ++++.++++++.|++++||+++.++||++.|++......         .+.....+....+.++..+|+|++++++|+++
T Consensus       159 ~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~  238 (258)
T PRK07890        159 GALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVASAVLFLAS  238 (258)
T ss_pred             HHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCccccCCHHHHHHHHHHHcC
Confidence            999999999999999999999999999999987543211         12233344456778888999999999999999


Q ss_pred             CCCCCccCcEEeecCCccc
Q 024230          246 PAASYITGQTVCIDGGFTV  264 (270)
Q Consensus       246 ~~~~~~~G~~i~vdgG~~~  264 (270)
                      +...+++|+.+.+|||+..
T Consensus       239 ~~~~~~~G~~i~~~gg~~~  257 (258)
T PRK07890        239 DLARAITGQTLDVNCGEYH  257 (258)
T ss_pred             HhhhCccCcEEEeCCcccc
Confidence            8888999999999999865

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.7e-41  Score=285.18  Aligned_cols=246  Identities=28%  Similarity=0.468  Sum_probs=221.8

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCeEEE-eeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGATVHT-CSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~~v~l-~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      |++|+++||||+++||++++++|+++|++|++ ..|+.+..++..++++..+.++.++.+|++|+++++++++++.+.+ 
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   80 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEF-   80 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            56899999999999999999999999999876 5888888888888887777889999999999999999999999988 


Q ss_pred             CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHH
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGA  176 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaa  176 (270)
                      +++|++|||+|.....++.+.+.+++++.+++|+.+++.+++++.|+|.+++.|+||++||..+..+.+....|+++|++
T Consensus        81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a  160 (250)
T PRK08063         81 GRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKAA  160 (250)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCccHHHHHHHH
Confidence            79999999999887788889999999999999999999999999999988888899999999888888888999999999


Q ss_pred             HHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEE
Q 024230          177 MNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTV  256 (270)
Q Consensus       177 l~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i  256 (270)
                      +++|+++++.|+.+.||+++.|+||+++|++...+..............+.++..+++|+++.+++++++...+++|+.+
T Consensus       161 ~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~  240 (250)
T PRK08063        161 LEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTPAGRMVEPEDVANAVLFLCSPEADMIRGQTI  240 (250)
T ss_pred             HHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCchhcCccCCEE
Confidence            99999999999999999999999999999987655444444445555667788899999999999999988889999999


Q ss_pred             eecCCccc
Q 024230          257 CIDGGFTV  264 (270)
Q Consensus       257 ~vdgG~~~  264 (270)
                      .+|||.++
T Consensus       241 ~~~gg~~~  248 (250)
T PRK08063        241 IVDGGRSL  248 (250)
T ss_pred             EECCCeee
Confidence            99999764

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.8e-41  Score=286.14  Aligned_cols=251  Identities=30%  Similarity=0.490  Sum_probs=225.0

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      +++++|++|||||++|||.+++++|+++|++|++++|+++.++++.+++...+.++.++.+|++++++++++++++.+.+
T Consensus         6 ~~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (263)
T PRK07814          6 FRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAF   85 (263)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            46889999999999999999999999999999999999988888888777666788899999999999999999999988


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh-cCCcEEEEecCccccccCCCChhhhhhH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRA-SGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~-~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                       +++|++|||||.....++.+.+.+++++++++|+.+++.+.+++.|+|.+ .+.++||++||..+..+.++...|+++|
T Consensus        86 -~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK  164 (263)
T PRK07814         86 -GRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAK  164 (263)
T ss_pred             -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCchhHHHH
Confidence             79999999999877777888999999999999999999999999999987 4568999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCc
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ  254 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  254 (270)
                      +++++++++++.|+.+ +|++++|+||+++|++...+.........+....+..+..+++|+++.++|++++...+++|+
T Consensus       165 ~a~~~~~~~~~~e~~~-~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~  243 (263)
T PRK07814        165 AALAHYTRLAALDLCP-RIRVNAIAPGSILTSALEVVAANDELRAPMEKATPLRRLGDPEDIAAAAVYLASPAGSYLTGK  243 (263)
T ss_pred             HHHHHHHHHHHHHHCC-CceEEEEEeCCCcCchhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcCCC
Confidence            9999999999999987 699999999999999775543344445555556677888899999999999999888999999


Q ss_pred             EEeecCCccccccc
Q 024230          255 TVCIDGGFTVNGFF  268 (270)
Q Consensus       255 ~i~vdgG~~~~~~~  268 (270)
                      .+.+|||.....++
T Consensus       244 ~~~~~~~~~~~~~~  257 (263)
T PRK07814        244 TLEVDGGLTFPNLD  257 (263)
T ss_pred             EEEECCCccCCCCC
Confidence            99999998775544

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=4.1e-44  Score=273.45  Aligned_cols=242  Identities=30%  Similarity=0.365  Sum_probs=219.8

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      .+|.|++|++||+.-|||+++++.|++.|++|+.+.|+++.++.+.+++.   .-+..+..|+++++.+.+.+..+    
T Consensus         3 t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p---~~I~Pi~~Dls~wea~~~~l~~v----   75 (245)
T KOG1207|consen    3 TSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETP---SLIIPIVGDLSAWEALFKLLVPV----   75 (245)
T ss_pred             ccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCC---cceeeeEecccHHHHHHHhhccc----
Confidence            36899999999999999999999999999999999999999988877653   34888999999977766655432    


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHH-HHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPL-LRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                       .++|.++||||+.-..||.+++.++|+..+++|+.+.+.+.|...+- +.++..|.|+++||.++.++..+...||++|
T Consensus        76 -~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtvYcatK  154 (245)
T KOG1207|consen   76 -FPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTVYCATK  154 (245)
T ss_pred             -CchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceEEeecH
Confidence             68999999999999999999999999999999999999999986553 3455678999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCc
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ  254 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  254 (270)
                      +|+++++|++|.|+++++||||++.|-.+.|.|.++--.++.....+..+.|++|+.+.+++.++++||+|+.+++.||.
T Consensus       155 aALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl~rFaEV~eVVnA~lfLLSd~ssmttGs  234 (245)
T KOG1207|consen  155 AALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPLKRFAEVDEVVNAVLFLLSDNSSMTTGS  234 (245)
T ss_pred             HHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchhhhCchhhhhHHHHHHhhheeeeecCcCcccCc
Confidence            99999999999999999999999999999999998876777777788899999999999999999999999999999999


Q ss_pred             EEeecCCcccc
Q 024230          255 TVCIDGGFTVN  265 (270)
Q Consensus       255 ~i~vdgG~~~~  265 (270)
                      ++.++||++.+
T Consensus       235 tlpveGGfs~~  245 (245)
T KOG1207|consen  235 TLPVEGGFSNN  245 (245)
T ss_pred             eeeecCCccCC
Confidence            99999999863

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.2e-41  Score=284.23  Aligned_cols=246  Identities=26%  Similarity=0.418  Sum_probs=220.4

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      .+++||+++||||+++||.+++++|+++|++|++++|+++.++++..++...+.++.++.+|+++++++.++++++.+.+
T Consensus         5 ~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (258)
T PRK06949          5 INLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEA   84 (258)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            45889999999999999999999999999999999999998888888777666788999999999999999999998887


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--------CcEEEEecCccccccCCCC
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG--------AASIVLMSSALGIVSANVG  167 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~--------~g~ii~iss~~~~~~~~~~  167 (270)
                       +++|++|||+|.....++.+.+.++|+.++++|+.+++.+++++.|.|.++.        .+++|+++|..+..+.+..
T Consensus        85 -~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~  163 (258)
T PRK06949         85 -GTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQI  163 (258)
T ss_pred             -CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCCc
Confidence             7999999999987777788889999999999999999999999999997664        4799999999998888888


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCC
Q 024230          168 TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA  247 (270)
Q Consensus       168 ~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (270)
                      ..|+++|++++.++++++.++.++||+|+.|+||+++|++....... ..........+.++...|+|+++.+.||+++.
T Consensus       164 ~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~  242 (258)
T PRK06949        164 GLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWET-EQGQKLVSMLPRKRVGKPEDLDGLLLLLAADE  242 (258)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccCh-HHHHHHHhcCCCCCCcCHHHHHHHHHHHhChh
Confidence            99999999999999999999999999999999999999987643221 22234455567889999999999999999999


Q ss_pred             CCCccCcEEeecCCcc
Q 024230          248 ASYITGQTVCIDGGFT  263 (270)
Q Consensus       248 ~~~~~G~~i~vdgG~~  263 (270)
                      +++++|+++.+|||+.
T Consensus       243 ~~~~~G~~i~~dgg~~  258 (258)
T PRK06949        243 SQFINGAIISADDGFG  258 (258)
T ss_pred             hcCCCCcEEEeCCCCC
Confidence            9999999999999973

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=4.5e-41  Score=285.40  Aligned_cols=244  Identities=23%  Similarity=0.315  Sum_probs=215.7

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcC--CeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG--LKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      +|+++||||+++||++++++|+++|++|++++|+.+..++..+++....  .++.++.+|++++++++++++++.+.+ +
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~   80 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIF-G   80 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence            7899999999999999999999999999999999888877777765532  478999999999999999999999988 7


Q ss_pred             cccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCccccccCCCChhhhhhHHH
Q 024230           98 KLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIVSANVGTVYSATKGA  176 (270)
Q Consensus        98 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~~~~~~~~~~~y~~sKaa  176 (270)
                      ++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||..+..+.+....|++||+|
T Consensus        81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKaa  160 (259)
T PRK12384         81 RVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFG  160 (259)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhHHHHHH
Confidence            999999999998888888999999999999999999999999999998776 6899999999888888888999999999


Q ss_pred             HHHHHHHHHHHHccCCceEEEEecCcc-cCCCCccccC---------ChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCC
Q 024230          177 MNQLAKNLACEWAKDNIRTNSVAPWYI-RTPFTEPLLG---------NGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP  246 (270)
Q Consensus       177 l~~~~~sla~el~~~~i~v~~v~pG~v-~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (270)
                      +++++++++.|++++||+|+.|+||++ .+++.....+         .++..+......+.++..+++|++++++||+++
T Consensus       161 ~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~~~  240 (259)
T PRK12384        161 GVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLFYASP  240 (259)
T ss_pred             HHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHHHHHHHHcCc
Confidence            999999999999999999999999975 6666543321         122223344567889999999999999999998


Q ss_pred             CCCCccCcEEeecCCccc
Q 024230          247 AASYITGQTVCIDGGFTV  264 (270)
Q Consensus       247 ~~~~~~G~~i~vdgG~~~  264 (270)
                      .+.+++|+++.+|||..+
T Consensus       241 ~~~~~~G~~~~v~~g~~~  258 (259)
T PRK12384        241 KASYCTGQSINVTGGQVM  258 (259)
T ss_pred             ccccccCceEEEcCCEEe
Confidence            889999999999999865

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=100.00  E-value=4.5e-41  Score=284.12  Aligned_cols=241  Identities=28%  Similarity=0.377  Sum_probs=215.3

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .+++++|+++|||++++||++++++|+++|++|++++|+.         +...+.++.++.+|++++++++++++++.+.
T Consensus         3 ~~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   73 (252)
T PRK08220          3 AMDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQEDYPFATFVLDVSDAAAVAQVCQRLLAE   73 (252)
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            3779999999999999999999999999999999999986         2233567889999999999999999999998


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                      + +++|++|||+|.....++.+.+.+++++.+++|+.+++.+++++.|+|++++.++||++||..+..+.++...|++||
T Consensus        74 ~-~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK  152 (252)
T PRK08220         74 T-GPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASK  152 (252)
T ss_pred             c-CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCCchhHHHH
Confidence            8 799999999999877888889999999999999999999999999999888788999999999988888889999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChh--------hHHHHhhcCCCCCCCChHhHHHHHHHHhCC
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGK--------FVDEVKSRTPMGRLGEPKEVSSLVAFLCMP  246 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (270)
                      ++++++++++++|+++.||+|+.+.||+++|++.........        ..+.+....+.+++..|+|++++++||+++
T Consensus       153 ~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  232 (252)
T PRK08220        153 AALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANAVLFLASD  232 (252)
T ss_pred             HHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccCCHHHHHHHHHHHhcc
Confidence            999999999999999999999999999999998655422111        123445566788999999999999999999


Q ss_pred             CCCCccCcEEeecCCcccc
Q 024230          247 AASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       247 ~~~~~~G~~i~vdgG~~~~  265 (270)
                      ...+++|+++.+|||.++.
T Consensus       233 ~~~~~~g~~i~~~gg~~~~  251 (252)
T PRK08220        233 LASHITLQDIVVDGGATLG  251 (252)
T ss_pred             hhcCccCcEEEECCCeecC
Confidence            8999999999999998764

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-41  Score=286.16  Aligned_cols=241  Identities=30%  Similarity=0.377  Sum_probs=207.9

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      ..+++||+++|||+++|||++++++|+++|++|++++|+++..         ...++.++.+|++|+++++++++++.+.
T Consensus         4 ~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~~~~~~   74 (260)
T PRK06523          4 FLELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD---------LPEGVEFVAADLTTAEGCAAVARAVLER   74 (260)
T ss_pred             CcCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh---------cCCceeEEecCCCCHHHHHHHHHHHHHH
Confidence            3468899999999999999999999999999999999986531         1346788999999999999999999888


Q ss_pred             cCCcccEEEECCCCCC--CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCC-CChhhh
Q 024230           95 FNGKLNIFVNNVGTSV--LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSAN-VGTVYS  171 (270)
Q Consensus        95 ~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~-~~~~y~  171 (270)
                      + +++|++|||||...  ..++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.+ ....|+
T Consensus        75 ~-~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~~Y~  153 (260)
T PRK06523         75 L-GGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYA  153 (260)
T ss_pred             c-CCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCCcchhH
Confidence            8 79999999999753  4567788999999999999999999999999999988778999999999888755 788999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC--------C-hhhHHHH---hhcCCCCCCCChHhHHHH
Q 024230          172 ATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG--------N-GKFVDEV---KSRTPMGRLGEPKEVSSL  239 (270)
Q Consensus       172 ~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~--------~-~~~~~~~---~~~~~~~~~~~~~dva~~  239 (270)
                      ++|+++++|+++++.|++++||+++.|+||+++|++......        . ....+.+   ....|.++..+|+|+++.
T Consensus       154 ~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~  233 (260)
T PRK06523        154 AAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEEVAEL  233 (260)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccCCCCCHHHHHHH
Confidence            999999999999999999999999999999999998643211        0 1111111   234678889999999999


Q ss_pred             HHHHhCCCCCCccCcEEeecCCcccc
Q 024230          240 VAFLCMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       240 ~~~l~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                      +.||+++.+++++|+.+.+|||+..+
T Consensus       234 ~~~l~s~~~~~~~G~~~~vdgg~~~~  259 (260)
T PRK06523        234 IAFLASDRAASITGTEYVIDGGTVPT  259 (260)
T ss_pred             HHHHhCcccccccCceEEecCCccCC
Confidence            99999999999999999999997653

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=8.4e-41  Score=283.27  Aligned_cols=247  Identities=26%  Similarity=0.350  Sum_probs=213.2

Q ss_pred             cccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           13 QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        13 ~~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      .++.+++||+++||||+++||+++|++|+++|++|++++|++++.++..+++   +.++.++.+|+++.++++++++++.
T Consensus         3 ~~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~   79 (255)
T PRK05717          3 EPNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL---GENAWFIAMDVADEAQVAAGVAEVL   79 (255)
T ss_pred             CCCcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHH
Confidence            4578899999999999999999999999999999999999887665544333   4568889999999999999999999


Q ss_pred             HHcCCcccEEEECCCCCCC--CCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhh
Q 024230           93 SLFNGKLNIFVNNVGTSVL--KPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVY  170 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y  170 (270)
                      +.+ +++|++|||||....  .++.+.+.++|++.+++|+.+++.+++++.|+|.+. .|+||++||..+..+.+.+..|
T Consensus        80 ~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~ii~~sS~~~~~~~~~~~~Y  157 (255)
T PRK05717         80 GQF-GRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH-NGAIVNLASTRARQSEPDTEAY  157 (255)
T ss_pred             HHh-CCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CcEEEEEcchhhcCCCCCCcch
Confidence            888 799999999998643  567788999999999999999999999999999765 4899999999999998899999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCC
Q 024230          171 SATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY  250 (270)
Q Consensus       171 ~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  250 (270)
                      ++||++++.++++++.++.+. |+|++|+||+++|++..... ............+.++..+|+|++..+.|++++...+
T Consensus       158 ~~sKaa~~~~~~~la~~~~~~-i~v~~i~Pg~i~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  235 (255)
T PRK05717        158 AASKGGLLALTHALAISLGPE-IRVNAVSPGWIDARDPSQRR-AEPLSEADHAQHPAGRVGTVEDVAAMVAWLLSRQAGF  235 (255)
T ss_pred             HHHHHHHHHHHHHHHHHhcCC-CEEEEEecccCcCCcccccc-chHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCchhcC
Confidence            999999999999999999874 99999999999998754321 1122222334567789999999999999999988889


Q ss_pred             ccCcEEeecCCccccc
Q 024230          251 ITGQTVCIDGGFTVNG  266 (270)
Q Consensus       251 ~~G~~i~vdgG~~~~~  266 (270)
                      ++|+.+.+|||+...+
T Consensus       236 ~~g~~~~~~gg~~~~~  251 (255)
T PRK05717        236 VTGQEFVVDGGMTRKM  251 (255)
T ss_pred             ccCcEEEECCCceEEE
Confidence            9999999999987543

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=7.4e-41  Score=280.41  Aligned_cols=233  Identities=21%  Similarity=0.291  Sum_probs=201.4

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      .+|++||||+++|||+++|++|+++|++|++++|+++...   +++...+  +.++.+|++++++++++++++.+.+ ++
T Consensus         1 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~~~--~~~~~~D~~~~~~~~~~~~~~~~~~-~~   74 (236)
T PRK06483          1 MPAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI---DGLRQAG--AQCIQADFSTNAGIMAFIDELKQHT-DG   74 (236)
T ss_pred             CCceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHHcC--CEEEEcCCCCHHHHHHHHHHHHhhC-CC
Confidence            3689999999999999999999999999999999876543   2333333  5678999999999999999999988 79


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CcEEEEecCccccccCCCChhhhhhHHH
Q 024230           99 LNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG--AASIVLMSSALGIVSANVGTVYSATKGA  176 (270)
Q Consensus        99 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~--~g~ii~iss~~~~~~~~~~~~y~~sKaa  176 (270)
                      +|++|||||........+.+.++|++++++|+.+++.+++.++|.|.+.+  .++||+++|..+..+.++...|++||++
T Consensus        75 id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~asKaa  154 (236)
T PRK06483         75 LRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAA  154 (236)
T ss_pred             ccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHHHHH
Confidence            99999999986555566788999999999999999999999999998765  5899999999988888889999999999


Q ss_pred             HHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEE
Q 024230          177 MNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTV  256 (270)
Q Consensus       177 l~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i  256 (270)
                      +++|+++++.|+++ +||||+|+||++.++..    ..+...+......+.++...|+|+++.+.||++  +.++||+++
T Consensus       155 l~~l~~~~a~e~~~-~irvn~v~Pg~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~--~~~~~G~~i  227 (236)
T PRK06483        155 LDNMTLSFAAKLAP-EVKVNSIAPALILFNEG----DDAAYRQKALAKSLLKIEPGEEEIIDLVDYLLT--SCYVTGRSL  227 (236)
T ss_pred             HHHHHHHHHHHHCC-CcEEEEEccCceecCCC----CCHHHHHHHhccCccccCCCHHHHHHHHHHHhc--CCCcCCcEE
Confidence            99999999999988 49999999999987532    122333344556788889999999999999996  689999999


Q ss_pred             eecCCccc
Q 024230          257 CIDGGFTV  264 (270)
Q Consensus       257 ~vdgG~~~  264 (270)
                      .+|||+++
T Consensus       228 ~vdgg~~~  235 (236)
T PRK06483        228 PVDGGRHL  235 (236)
T ss_pred             EeCccccc
Confidence            99999875

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.3e-40  Score=282.33  Aligned_cols=242  Identities=26%  Similarity=0.373  Sum_probs=212.7

Q ss_pred             CCCCCCEEEEecCCC--cHHHHHHHHHHHCCCeEEEeeCC-----------hhHHHHHHHHHHhcCCeEEEEEccCCCHH
Q 024230           16 WSLQGMTALVTGGTK--GLGLAVVEELSMLGATVHTCSRT-----------ETELNECIHHLQMKGLKVTGSVCDVSSRP   82 (270)
Q Consensus        16 ~~l~gk~vlItG~s~--giG~~la~~l~~~G~~v~l~~r~-----------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   82 (270)
                      +.+++|+++|||+++  |||.++|++|+++|++|++++|+           .+....+.+++...+.++.++.+|+++++
T Consensus         1 ~~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   80 (256)
T PRK12748          1 LPLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPY   80 (256)
T ss_pred             CCCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence            467899999999994  99999999999999999999987           22222345556555678999999999999


Q ss_pred             HHHHHHHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccc
Q 024230           83 QRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIV  162 (270)
Q Consensus        83 ~~~~~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~  162 (270)
                      +++++++++.+.+ +++|++|||||+....++.+.+.+++++.+++|+.+++.+.+++.|.|.++..++||++||..+..
T Consensus        81 ~~~~~~~~~~~~~-g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~  159 (256)
T PRK12748         81 APNRVFYAVSERL-GDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLG  159 (256)
T ss_pred             HHHHHHHHHHHhC-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccC
Confidence            9999999999988 799999999999877888899999999999999999999999999999877778999999999888


Q ss_pred             cCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHH
Q 024230          163 SANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAF  242 (270)
Q Consensus       163 ~~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  242 (270)
                      +.++...|++||+++++++++++.|+.+.||+|+.|+||+++|++...     .....+....+..+..+|+|+++.+.|
T Consensus       160 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~-----~~~~~~~~~~~~~~~~~~~~~a~~~~~  234 (256)
T PRK12748        160 PMPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITE-----ELKHHLVPKFPQGRVGEPVDAARLIAF  234 (256)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCCh-----hHHHhhhccCCCCCCcCHHHHHHHHHH
Confidence            888889999999999999999999999999999999999999986532     222333445566778899999999999


Q ss_pred             HhCCCCCCccCcEEeecCCcc
Q 024230          243 LCMPAASYITGQTVCIDGGFT  263 (270)
Q Consensus       243 l~s~~~~~~~G~~i~vdgG~~  263 (270)
                      |+++.+.+++|+++.+|||++
T Consensus       235 l~~~~~~~~~g~~~~~d~g~~  255 (256)
T PRK12748        235 LVSEEAKWITGQVIHSEGGFS  255 (256)
T ss_pred             HhCcccccccCCEEEecCCcc
Confidence            999989999999999999975

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=100.00  E-value=1.1e-40  Score=281.39  Aligned_cols=245  Identities=27%  Similarity=0.459  Sum_probs=222.6

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      |++|++|||||+++||++++++|+++|++|++++|+.+..++..+.+...+.++.++.+|+++.++++++++++.+.+ +
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~   79 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQAL-G   79 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence            578999999999999999999999999999999999988888777777667789999999999999999999999888 7


Q ss_pred             cccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHH
Q 024230           98 KLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAM  177 (270)
Q Consensus        98 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal  177 (270)
                      ++|++|||+|.....++.+.+.+++++.+++|+.+++.+++++.|+|++.+.++||++||..++.+.++...|+++|+|+
T Consensus        80 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~~~Y~~sK~a~  159 (250)
T TIGR03206        80 PVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGL  159 (250)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCCchHHHHHHHH
Confidence            99999999998777788888999999999999999999999999999887778999999999999989999999999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEecCcccCCCCccccC----ChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccC
Q 024230          178 NQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG----NGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG  253 (270)
Q Consensus       178 ~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  253 (270)
                      +.++++++.++.+.|++++.++||+++|++......    .......+....+.++..+++|+++++.++++++..+++|
T Consensus       160 ~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g  239 (250)
T TIGR03206       160 VAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFSSDDASFITG  239 (250)
T ss_pred             HHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCccCCcCHHHHHHHHHHHcCcccCCCcC
Confidence            999999999999999999999999999998665432    1223455666778888999999999999999999999999


Q ss_pred             cEEeecCCcc
Q 024230          254 QTVCIDGGFT  263 (270)
Q Consensus       254 ~~i~vdgG~~  263 (270)
                      +++.+|||..
T Consensus       240 ~~~~~~~g~~  249 (250)
T TIGR03206       240 QVLSVSGGLT  249 (250)
T ss_pred             cEEEeCCCcc
Confidence            9999999965

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK06138 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-40  Score=280.27  Aligned_cols=248  Identities=29%  Similarity=0.483  Sum_probs=220.3

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      |+++||+++||||+++||.+++++|+++|++|++++|+.+..+...+++. .+.++.++.+|++|+++++++++++.+.+
T Consensus         1 m~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   79 (252)
T PRK06138          1 MRLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA-AGGRAFARQGDVGSAEAVEALVDFVAARW   79 (252)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999999888777766665 45678999999999999999999999988


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKG  175 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKa  175 (270)
                       +++|++|||+|.....++.+.+.+++++++++|+.+++.+++.+++.|++.+.++|+++||..+..+.+....|+.+|+
T Consensus        80 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~  158 (252)
T PRK06138         80 -GRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKG  158 (252)
T ss_pred             -CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCccHHHHHHH
Confidence             7999999999998777888899999999999999999999999999999888889999999999888888999999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC---hh-hHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCc
Q 024230          176 AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN---GK-FVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI  251 (270)
Q Consensus       176 al~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  251 (270)
                      +++.++++++.|+.+.|++++.++||+++|++.......   +. .........+..++.+++|+++.+++++++...++
T Consensus       159 a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~  238 (252)
T PRK06138        159 AIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALFLASDESSFA  238 (252)
T ss_pred             HHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCc
Confidence            999999999999999999999999999999987654321   11 11222334566668899999999999999988999


Q ss_pred             cCcEEeecCCcccc
Q 024230          252 TGQTVCIDGGFTVN  265 (270)
Q Consensus       252 ~G~~i~vdgG~~~~  265 (270)
                      +|+.+.+|||++++
T Consensus       239 ~g~~~~~~~g~~~~  252 (252)
T PRK06138        239 TGTTLVVDGGWLAA  252 (252)
T ss_pred             cCCEEEECCCeecC
Confidence            99999999999864

>PRK08628 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8e-41  Score=283.72  Aligned_cols=245  Identities=26%  Similarity=0.370  Sum_probs=213.0

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      ++|+||++|||||+++||+++|++|+++|++|++++|+++.. +..+++...+.++.++.+|++++++++++++++.+.+
T Consensus         3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (258)
T PRK08628          3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKF   81 (258)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            689999999999999999999999999999999999998876 6667777667789999999999999999999999988


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKG  175 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKa  175 (270)
                       +++|++|||+|......+.... ++|++.+++|+.+++.+++.+.|+|++. .++|+++||..+..+.+....|++||+
T Consensus        82 -~~id~vi~~ag~~~~~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK~  158 (258)
T PRK08628         82 -GRIDGLVNNAGVNDGVGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKAS-RGAIVNISSKTALTGQGGTSGYAAAKG  158 (258)
T ss_pred             -CCCCEEEECCcccCCCcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhcc-CcEEEEECCHHhccCCCCCchhHHHHH
Confidence             7999999999986555554444 9999999999999999999999998765 489999999999998889999999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC----ChhhHHHHhhcCCCC-CCCChHhHHHHHHHHhCCCCCC
Q 024230          176 AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG----NGKFVDEVKSRTPMG-RLGEPKEVSSLVAFLCMPAASY  250 (270)
Q Consensus       176 al~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~dva~~~~~l~s~~~~~  250 (270)
                      ++++++++++.|+.++||+++.|+||+++|++...+..    .......+....+.+ ++.+|+|+++.++|++++.+.+
T Consensus       159 a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  238 (258)
T PRK08628        159 AQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVFLLSERSSH  238 (258)
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHHHHHHHHHhChhhcc
Confidence            99999999999999999999999999999997654321    112223333344553 7889999999999999998899


Q ss_pred             ccCcEEeecCCccc
Q 024230          251 ITGQTVCIDGGFTV  264 (270)
Q Consensus       251 ~~G~~i~vdgG~~~  264 (270)
                      ++|+.+.+|||++.
T Consensus       239 ~~g~~~~~~gg~~~  252 (258)
T PRK08628        239 TTGQWLFVDGGYVH  252 (258)
T ss_pred             ccCceEEecCCccc
Confidence            99999999999753

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.4e-40  Score=279.26  Aligned_cols=248  Identities=31%  Similarity=0.501  Sum_probs=221.5

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      |++++|+++||||+++||.+++++|+++|++|++++|+++..+...+.+.. +.++.++.+|++++++++++++++...+
T Consensus         1 ~~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (251)
T PRK07231          1 MRLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA-GGRAIAVAADVSDEADVEAAVAAALERF   79 (251)
T ss_pred             CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            468899999999999999999999999999999999999888777777654 5678899999999999999999998888


Q ss_pred             CCcccEEEECCCCCC-CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           96 NGKLNIFVNNVGTSV-LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        96 ~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                       +++|++||++|... ..++.+.+.+++++.+++|+.+++.+++.+.++|.+++.++||++||..+..+.++...|+.+|
T Consensus        80 -~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk  158 (251)
T PRK07231         80 -GSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASK  158 (251)
T ss_pred             -CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCchHHHHHH
Confidence             79999999999854 4567788999999999999999999999999999888788999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC--hhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCcc
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN--GKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT  252 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  252 (270)
                      ++++.++++++.++++.||+++.++||+++|++.......  +.....+....+.++...++|++.++++++++...+++
T Consensus       159 ~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  238 (251)
T PRK07231        159 GAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAALFLASDEASWIT  238 (251)
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCccccCCC
Confidence            9999999999999999999999999999999987665431  23334455667788889999999999999998888999


Q ss_pred             CcEEeecCCcccc
Q 024230          253 GQTVCIDGGFTVN  265 (270)
Q Consensus       253 G~~i~vdgG~~~~  265 (270)
                      |+.+.+|||.+++
T Consensus       239 g~~~~~~gg~~~~  251 (251)
T PRK07231        239 GVTLVVDGGRCVG  251 (251)
T ss_pred             CCeEEECCCccCc
Confidence            9999999998653

>TIGR02415 23BDH acetoin reductases

Probab=100.00  E-value=1.7e-40  Score=280.92  Aligned_cols=243  Identities=30%  Similarity=0.457  Sum_probs=219.0

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      |+++|||++++||.+++++|+++|++|++++|+++..++..+++...+.++.++.+|++|+++++++++++.+.+ +++|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~-~~id   79 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKF-GGFD   79 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-CCCC
Confidence            689999999999999999999999999999999888888888887777789999999999999999999999988 7999


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCccccccCCCChhhhhhHHHHHH
Q 024230          101 IFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIVSANVGTVYSATKGAMNQ  179 (270)
Q Consensus       101 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~~~~~~~~~~~y~~sKaal~~  179 (270)
                      ++|||+|.....++.+.+.++|++++++|+.+++.+++++++.|++.+ .+++|++||..+..+.+.+..|++||+++++
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  159 (254)
T TIGR02415        80 VMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRG  159 (254)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchHHHHHHHHH
Confidence            999999998888888999999999999999999999999999998765 4799999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEecCcccCCCCccccCC---------hhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCC
Q 024230          180 LAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN---------GKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY  250 (270)
Q Consensus       180 ~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  250 (270)
                      |+++++.|+.+.||+|+.++||+++|++.......         ....+.+....+.++..+|+|+++++.||+++.+.+
T Consensus       160 ~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~  239 (254)
T TIGR02415       160 LTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFLASEDSDY  239 (254)
T ss_pred             HHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHHHHHHHHhhcccccCC
Confidence            99999999999999999999999999986554321         111233445677888999999999999999999999


Q ss_pred             ccCcEEeecCCccc
Q 024230          251 ITGQTVCIDGGFTV  264 (270)
Q Consensus       251 ~~G~~i~vdgG~~~  264 (270)
                      ++|+++.+|||.+.
T Consensus       240 ~~g~~~~~d~g~~~  253 (254)
T TIGR02415       240 ITGQSILVDGGMVY  253 (254)
T ss_pred             ccCcEEEecCCccC
Confidence            99999999999764

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-40  Score=280.66  Aligned_cols=247  Identities=32%  Similarity=0.518  Sum_probs=220.5

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      -.+++||+++||||+++||.++|++|+++|++|++++|+.+.++...+++...+.++.++.+|++|+++++++++++.+.
T Consensus         7 ~~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~   86 (259)
T PRK08213          7 LFDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLER   86 (259)
T ss_pred             hhCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            35688999999999999999999999999999999999998888888888776778889999999999999999999998


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHH-HHhcCCcEEEEecCccccccCCC----Chh
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPL-LRASGAASIVLMSSALGIVSANV----GTV  169 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-m~~~~~g~ii~iss~~~~~~~~~----~~~  169 (270)
                      + +++|++|||+|.....+..+.+.++|++++++|+.+++.+++++.|+ |.+++.+++|++||..+..+.+.    ...
T Consensus        87 ~-~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~~~~~~  165 (259)
T PRK08213         87 F-GHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIA  165 (259)
T ss_pred             h-CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccccCcch
Confidence            8 79999999999876777788899999999999999999999999998 77766789999999887766544    378


Q ss_pred             hhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCC
Q 024230          170 YSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAAS  249 (270)
Q Consensus       170 y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  249 (270)
                      |+++|+++++++++++.++.+.||+++.++||+++|++...+.  +...+.+....+..+.++++|+++.+.||+++.+.
T Consensus       166 Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  243 (259)
T PRK08213        166 YNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTL--ERLGEDLLAHTPLGRLGDDEDLKGAALLLASDASK  243 (259)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhh--HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence            9999999999999999999999999999999999999865542  33444566677888889999999999999999999


Q ss_pred             CccCcEEeecCCccc
Q 024230          250 YITGQTVCIDGGFTV  264 (270)
Q Consensus       250 ~~~G~~i~vdgG~~~  264 (270)
                      +++|+++.+|||.++
T Consensus       244 ~~~G~~~~~~~~~~~  258 (259)
T PRK08213        244 HITGQILAVDGGVSA  258 (259)
T ss_pred             CccCCEEEECCCeec
Confidence            999999999999764

>PRK06500 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-40  Score=280.22  Aligned_cols=241  Identities=30%  Similarity=0.484  Sum_probs=211.8

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      .+++|+++||||+++||++++++|+++|++|++++|+++..++..+++   +.++.++.+|+++.+++.++++++.+.+ 
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   78 (249)
T PRK06500          3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL---GESALVIRADAGDVAAQKALAQALAEAF-   78 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHh-
Confidence            578999999999999999999999999999999999987666555443   5678889999999999999999999888 


Q ss_pred             CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHH
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGA  176 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaa  176 (270)
                      +++|++|||||.....++.+.+.+++++++++|+.+++.+++++.|+|.+  .+++|+++|..+..+.+....|+++|++
T Consensus        79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~i~~~S~~~~~~~~~~~~Y~~sK~a  156 (249)
T PRK06500         79 GRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN--PASIVLNGSINAHIGMPNSSVYAASKAA  156 (249)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEechHhccCCCCccHHHHHHHH
Confidence            79999999999877777888999999999999999999999999999864  3689999999888888889999999999


Q ss_pred             HHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC----hhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCcc
Q 024230          177 MNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN----GKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT  252 (270)
Q Consensus       177 l~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  252 (270)
                      +++++++++.|+.++||+++.|+||+++|++.......    ......+....+.++..+|+|+++++.||+++.+.+++
T Consensus       157 ~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~  236 (249)
T PRK06500        157 LLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAVLYLASDESAFIV  236 (249)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcc
Confidence            99999999999999999999999999999976532111    12223344556778889999999999999998889999


Q ss_pred             CcEEeecCCcc
Q 024230          253 GQTVCIDGGFT  263 (270)
Q Consensus       253 G~~i~vdgG~~  263 (270)
                      |+.+.+|||.+
T Consensus       237 g~~i~~~gg~~  247 (249)
T PRK06500        237 GSEIIVDGGMS  247 (249)
T ss_pred             CCeEEECCCcc
Confidence            99999999965

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=5.2e-41  Score=279.16  Aligned_cols=218  Identities=25%  Similarity=0.330  Sum_probs=199.7

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .-+++|++||||||++|+|+++|.+|+++|++++++|.+.+..++..++++..| +++.+.||+++.+++.+..+++++.
T Consensus        33 ~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis~~eei~~~a~~Vk~e  111 (300)
T KOG1201|consen   33 LKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDISDREEIYRLAKKVKKE  111 (300)
T ss_pred             hhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCCCHHHHHHHHHHHHHh
Confidence            457899999999999999999999999999999999999999999999998775 9999999999999999999999999


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                      . |++|+||||||+....++.+.+.+++++++++|+.|+++.+++|+|.|.+.+.|+||+|+|.+|+.+.++...||+||
T Consensus       112 ~-G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~~YcaSK  190 (300)
T KOG1201|consen  112 V-GDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLADYCASK  190 (300)
T ss_pred             c-CCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccchhhhhhH
Confidence            8 899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHc---cCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHh
Q 024230          175 GAMNQLAKNLACEWA---KDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLC  244 (270)
Q Consensus       175 aal~~~~~sla~el~---~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  244 (270)
                      +|+.+|.++|..|+.   ..||++..|+|++++|.|...-.+.          ..+-...+|+.+|+.++.-.
T Consensus       191 ~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~~~~~----------~~l~P~L~p~~va~~Iv~ai  253 (300)
T KOG1201|consen  191 FAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDGATPF----------PTLAPLLEPEYVAKRIVEAI  253 (300)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCCCCCC----------ccccCCCCHHHHHHHHHHHH
Confidence            999999999999996   4579999999999999988761111          12234567888888887665

>PRK12937 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.7e-40  Score=276.66  Aligned_cols=243  Identities=27%  Similarity=0.433  Sum_probs=216.7

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChh-HHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTET-ELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      |++++|+++|||++++||+++|++|+++|++|+++.|+.+ ..++..+++...+.++.++.+|+++.++++++++++.+.
T Consensus         1 ~~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (245)
T PRK12937          1 MTLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETA   80 (245)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            5788999999999999999999999999999988877544 455666777666778999999999999999999999998


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                      + +++|++|||||.....++.+.+.+++++++++|+.+++.+++++.|+|.+  .++||++||..+..+.+++..|+++|
T Consensus        81 ~-~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~~~~~~Y~~sK  157 (245)
T PRK12937         81 F-GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ--GGRIINLSTSVIALPLPGYGPYAASK  157 (245)
T ss_pred             c-CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc--CcEEEEEeeccccCCCCCCchhHHHH
Confidence            8 79999999999887778888999999999999999999999999999864  47999999999988889999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCc
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ  254 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  254 (270)
                      ++++.++++++.|+.+.||+++.|+||+++|+|..... .+.....+....|.++..+++|+++.+.|++++.+.+++|+
T Consensus       158 ~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~  236 (245)
T PRK12937        158 AAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGK-SAEQIDQLAGLAPLERLGTPEEIAAAVAFLAGPDGAWVNGQ  236 (245)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccC-CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCcccc
Confidence            99999999999999999999999999999999854322 23344556667788899999999999999999989999999


Q ss_pred             EEeecCCc
Q 024230          255 TVCIDGGF  262 (270)
Q Consensus       255 ~i~vdgG~  262 (270)
                      .+.+|||+
T Consensus       237 ~~~~~~g~  244 (245)
T PRK12937        237 VLRVNGGF  244 (245)
T ss_pred             EEEeCCCC
Confidence            99999986

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.4e-40  Score=286.81  Aligned_cols=244  Identities=28%  Similarity=0.387  Sum_probs=210.0

Q ss_pred             cccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh-hHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Q 024230           13 QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTE-TELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTV   91 (270)
Q Consensus        13 ~~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i   91 (270)
                      .+..+++||+++||||++|||+++|++|+++|++|++++++. +..++..+++...+.++.++.+|++++++++++++.+
T Consensus         5 ~~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~   84 (306)
T PRK07792          5 TNTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATA   84 (306)
T ss_pred             cCCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHH
Confidence            345789999999999999999999999999999999998754 4566777778777788999999999999999999999


Q ss_pred             HHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-------CcEEEEecCccccccC
Q 024230           92 SSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-------AASIVLMSSALGIVSA  164 (270)
Q Consensus        92 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-------~g~ii~iss~~~~~~~  164 (270)
                      .+ + +++|++|||||......+.+.+.++|++.+++|+.+++.+++++.|+|+++.       .|+||++||..+..+.
T Consensus        85 ~~-~-g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  162 (306)
T PRK07792         85 VG-L-GGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGP  162 (306)
T ss_pred             HH-h-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCC
Confidence            88 7 8999999999998777888899999999999999999999999999997531       3799999999999888


Q ss_pred             CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHh
Q 024230          165 NVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLC  244 (270)
Q Consensus       165 ~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  244 (270)
                      ++...|+++|+++++|+++++.|+.++||+||+|+|| +.|+|...........  ..   ......+|+|+++.+.||+
T Consensus       163 ~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg-~~t~~~~~~~~~~~~~--~~---~~~~~~~pe~va~~v~~L~  236 (306)
T PRK07792        163 VGQANYGAAKAGITALTLSAARALGRYGVRANAICPR-ARTAMTADVFGDAPDV--EA---GGIDPLSPEHVVPLVQFLA  236 (306)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCC-CCCchhhhhccccchh--hh---hccCCCCHHHHHHHHHHHc
Confidence            8899999999999999999999999999999999999 4888765432211100  00   0112347999999999999


Q ss_pred             CCCCCCccCcEEeecCCccc
Q 024230          245 MPAASYITGQTVCIDGGFTV  264 (270)
Q Consensus       245 s~~~~~~~G~~i~vdgG~~~  264 (270)
                      ++.+.+++|+++.+|||...
T Consensus       237 s~~~~~~tG~~~~v~gg~~~  256 (306)
T PRK07792        237 SPAAAEVNGQVFIVYGPMVT  256 (306)
T ss_pred             CccccCCCCCEEEEcCCeEE
Confidence            99889999999999999755

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-40  Score=283.01  Aligned_cols=238  Identities=26%  Similarity=0.333  Sum_probs=208.8

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhH-------HHHHHHHHHhcCCeEEEEEccCCCHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETE-------LNECIHHLQMKGLKVTGSVCDVSSRPQRQTL   87 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   87 (270)
                      +|++++|+++||||++|||.++|++|+++|++|++++|+.+.       +++..+++...+.++.++.+|+++++++.++
T Consensus         1 ~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~   80 (273)
T PRK08278          1 MMSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAA   80 (273)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHH
Confidence            356899999999999999999999999999999999997652       4455666666677899999999999999999


Q ss_pred             HHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC--C
Q 024230           88 INTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA--N  165 (270)
Q Consensus        88 ~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~--~  165 (270)
                      ++++.+.+ +++|++|||||.....++.+.+.++|++++++|+.+++.+++++.|+|.+++.++|++++|..+..+.  +
T Consensus        81 ~~~~~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~  159 (273)
T PRK08278         81 VAKAVERF-GGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFA  159 (273)
T ss_pred             HHHHHHHh-CCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccccccC
Confidence            99998888 79999999999887778888999999999999999999999999999998877899999998887776  7


Q ss_pred             CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecC-cccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHh
Q 024230          166 VGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPW-YIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLC  244 (270)
Q Consensus       166 ~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  244 (270)
                      ++..|++||+++++|+++++.|+.++||+|+.|+|| +++|++...+...         ..+.++..+|+++++.+++++
T Consensus       160 ~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~~~---------~~~~~~~~~p~~va~~~~~l~  230 (273)
T PRK08278        160 PHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLLGG---------DEAMRRSRTPEIMADAAYEIL  230 (273)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhcccc---------cccccccCCHHHHHHHHHHHh
Confidence            788999999999999999999999999999999999 6888765443211         123456789999999999999


Q ss_pred             CCCCCCccCcEEeecCCcc
Q 024230          245 MPAASYITGQTVCIDGGFT  263 (270)
Q Consensus       245 s~~~~~~~G~~i~vdgG~~  263 (270)
                      ++...+++|+.+ +|+++.
T Consensus       231 ~~~~~~~~G~~~-~~~~~~  248 (273)
T PRK08278        231 SRPAREFTGNFL-IDEEVL  248 (273)
T ss_pred             cCccccceeEEE-eccchh
Confidence            998899999988 677754

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=100.00  E-value=7.7e-40  Score=275.23  Aligned_cols=244  Identities=29%  Similarity=0.413  Sum_probs=215.8

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      |+++++|+++||||+++||++++++|+++|+.|++.+|+.+.+++....+   +.++.++.+|+++.++++++++++.+.
T Consensus         1 ~~~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (245)
T PRK12936          1 MFDLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL---GERVKIFPANLSDRDEVKALGQKAEAD   77 (245)
T ss_pred             CcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            35788999999999999999999999999999999999888776655433   456888999999999999999999998


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                      + +++|++|||||.....++.+.+.++|++++++|+.+++.+++++.+.|.+++.++||++||..+..+.+....|+++|
T Consensus        78 ~-~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sk  156 (245)
T PRK12936         78 L-EGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASK  156 (245)
T ss_pred             c-CCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCCcchHHHH
Confidence            8 799999999999877788888999999999999999999999999988777778999999999999989999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCc
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ  254 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  254 (270)
                      ++++++++.++.++.+.|++++.++||+++|++.....  ....+......+..+..+++|+++.+.|++++...+++|+
T Consensus       157 ~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~~~~~~~~~G~  234 (245)
T PRK12936        157 AGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLN--DKQKEAIMGAIPMKRMGTGAEVASAVAYLASSEAAYVTGQ  234 (245)
T ss_pred             HHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccC--hHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCccccCcCCC
Confidence            99999999999999999999999999999998775542  2222233445677888999999999999999888899999


Q ss_pred             EEeecCCccc
Q 024230          255 TVCIDGGFTV  264 (270)
Q Consensus       255 ~i~vdgG~~~  264 (270)
                      ++.+|||.+.
T Consensus       235 ~~~~~~g~~~  244 (245)
T PRK12936        235 TIHVNGGMAM  244 (245)
T ss_pred             EEEECCCccc
Confidence            9999999763

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-40  Score=285.80  Aligned_cols=237  Identities=21%  Similarity=0.250  Sum_probs=210.2

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      ..+++||+++||||++|||+++|++|+++|++|++++|+++.++++.+++.. +.++..+.+|++|.++++++++++.+.
T Consensus         4 ~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~   82 (296)
T PRK05872          4 MTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG-DDRVLTVVADVTDLAAMQAAAEEAVER   82 (296)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC-CCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            3568999999999999999999999999999999999999988888777643 456778889999999999999999998


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                      + +++|++|||||.....++.+.+.++|++++++|+.+++.+++.++|+|.++ .|+||++||..+..+.++...|++||
T Consensus        83 ~-g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  160 (296)
T PRK05872         83 F-GGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER-RGYVLQVSSLAAFAAAPGMAAYCASK  160 (296)
T ss_pred             c-CCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCEEEEEeCHhhcCCCCCchHHHHHH
Confidence            8 799999999999888888999999999999999999999999999999775 48999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhc--CCCCCCCChHhHHHHHHHHhCCCCCCcc
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSR--TPMGRLGEPKEVSSLVAFLCMPAASYIT  252 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~dva~~~~~l~s~~~~~~~  252 (270)
                      +++++|+++++.|+.++||+|+.++||+++|+|.............+...  .+.++..+++|+++.+.+++++...+++
T Consensus       161 aal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~i~~~~~~~~~~i~  240 (296)
T PRK05872        161 AGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPLRRTTSVEKCAAAFVDGIERRARRVY  240 (296)
T ss_pred             HHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCcccCCCCHHHHHHHHHHHHhcCCCEEE
Confidence            99999999999999999999999999999999887654332333333333  3567889999999999999998888887


Q ss_pred             Cc
Q 024230          253 GQ  254 (270)
Q Consensus       253 G~  254 (270)
                      |.
T Consensus       241 ~~  242 (296)
T PRK05872        241 AP  242 (296)
T ss_pred             ch
Confidence            75

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=8.8e-40  Score=274.87  Aligned_cols=242  Identities=30%  Similarity=0.412  Sum_probs=215.0

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChh-HHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTET-ELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      |+++|||++++||+++|++|+++|++|++++|+++ ..++..+.+...+.++.++.+|++++++++++++++.+.+ +++
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-~~i   81 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEE-GPV   81 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHc-CCC
Confidence            69999999999999999999999999999999854 2333334443445678999999999999999999999988 799


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHHHH
Q 024230          100 NIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQ  179 (270)
Q Consensus       100 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal~~  179 (270)
                      |++|||+|.....++.+.+.++|++++++|+.+++.++++++|.|++++.++||++||..+..+.++.+.|++||+++++
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~Y~~sK~a~~~  161 (245)
T PRK12824         82 DILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIG  161 (245)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCChHHHHHHHHHHH
Confidence            99999999988788889999999999999999999999999999988878899999999999988899999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEEeec
Q 024230          180 LAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCID  259 (270)
Q Consensus       180 ~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vd  259 (270)
                      ++++++.|+.+.||+++.++||+++|++.+.+.  +.....+....+.++..+++|+++.+.+|+++...+++|+.+.+|
T Consensus       162 ~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~~~  239 (245)
T PRK12824        162 FTKALASEGARYGITVNCIAPGYIATPMVEQMG--PEVLQSIVNQIPMKRLGTPEEIAAAVAFLVSEAAGFITGETISIN  239 (245)
T ss_pred             HHHHHHHHHHHhCeEEEEEEEcccCCcchhhcC--HHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccCcEEEEC
Confidence            999999999999999999999999999876653  333444555677888899999999999999988899999999999


Q ss_pred             CCcccc
Q 024230          260 GGFTVN  265 (270)
Q Consensus       260 gG~~~~  265 (270)
                      ||.+++
T Consensus       240 ~g~~~~  245 (245)
T PRK12824        240 GGLYMH  245 (245)
T ss_pred             CCeecC
Confidence            998764

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=6.9e-40  Score=274.85  Aligned_cols=236  Identities=28%  Similarity=0.432  Sum_probs=209.8

Q ss_pred             EEEecCCCcHHHHHHHHHHHCCCeEEEeeCC-hhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcccE
Q 024230           23 ALVTGGTKGLGLAVVEELSMLGATVHTCSRT-ETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNI  101 (270)
Q Consensus        23 vlItG~s~giG~~la~~l~~~G~~v~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~  101 (270)
                      ++|||++++||.++|++|+++|++|++++|+ ++..+...++++..+.++.++.+|++++++++++++++...+ +++|+
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~i~~   79 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEH-GAYYG   79 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHc-CCCCE
Confidence            6899999999999999999999999998865 455667777777777789999999999999999999988887 79999


Q ss_pred             EEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHH-HHHHhcCCcEEEEecCccccccCCCChhhhhhHHHHHHH
Q 024230          102 FVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAH-PLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQL  180 (270)
Q Consensus       102 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal~~~  180 (270)
                      +|||+|.....++.+.+.++|++++++|+.+++.++++++ |.+++++.++||++||..+..+.++...|+++|++++++
T Consensus        80 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~  159 (239)
T TIGR01831        80 VVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGA  159 (239)
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCCcchHHHHHHHHHH
Confidence            9999999877788888999999999999999999999875 555555678999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEEeecC
Q 024230          181 AKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDG  260 (270)
Q Consensus       181 ~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdg  260 (270)
                      +++++.|+.++||+++.|+||+++|++.....   ...+......|+++..+|+|+++.+.||+++.+.+++|+.+.+||
T Consensus       160 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~g  236 (239)
T TIGR01831       160 TKALAVELAKRKITVNCIAPGLIDTEMLAEVE---HDLDEALKTVPMNRMGQPAEVASLAGFLMSDGASYVTRQVISVNG  236 (239)
T ss_pred             HHHHHHHHhHhCeEEEEEEEccCccccchhhh---HHHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhcCccCCEEEecC
Confidence            99999999999999999999999999876542   222334456788899999999999999999999999999999999


Q ss_pred             Cc
Q 024230          261 GF  262 (270)
Q Consensus       261 G~  262 (270)
                      |.
T Consensus       237 g~  238 (239)
T TIGR01831       237 GM  238 (239)
T ss_pred             Cc
Confidence            95

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK12742 oxidoreductase; Provisional

Probab=100.00  E-value=1.1e-39  Score=273.16  Aligned_cols=232  Identities=28%  Similarity=0.416  Sum_probs=197.4

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeC-ChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSR-TETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      .+++|++|||||+++||+++|++|+++|++|+++.+ +++..+++.+++     .+.++.+|++|.+++.+++++    +
T Consensus         3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~-----~~~~~~~D~~~~~~~~~~~~~----~   73 (237)
T PRK12742          3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET-----GATAVQTDSADRDAVIDVVRK----S   73 (237)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh-----CCeEEecCCCCHHHHHHHHHH----h
Confidence            578999999999999999999999999999988866 444444443322     245678999999888777653    3


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccc-ccCCCChhhhhhH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGI-VSANVGTVYSATK  174 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~-~~~~~~~~y~~sK  174 (270)
                       +++|++|||+|.....+..+.++++|++++++|+.+++.+++.+.++|.+  .+++|++||..+. .+.++...|+++|
T Consensus        74 -~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y~~sK  150 (237)
T PRK12742         74 -GALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPE--GGRIIIIGSVNGDRMPVAGMAAYAASK  150 (237)
T ss_pred             -CCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc--CCeEEEEeccccccCCCCCCcchHHhH
Confidence             78999999999877777778899999999999999999999999999864  4799999998874 5677889999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCc
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ  254 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  254 (270)
                      +++++++++++.|+.+.||+|+.|+||+++|++.....   ...+......+.+++.+|+|+++.+.||+++.++++||+
T Consensus       151 aa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~---~~~~~~~~~~~~~~~~~p~~~a~~~~~l~s~~~~~~~G~  227 (237)
T PRK12742        151 SALQGMARGLARDFGPRGITINVVQPGPIDTDANPANG---PMKDMMHSFMAIKRHGRPEEVAGMVAWLAGPEASFVTGA  227 (237)
T ss_pred             HHHHHHHHHHHHHHhhhCeEEEEEecCcccCCcccccc---HHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCcccCC
Confidence            99999999999999999999999999999999865421   223334455678899999999999999999999999999


Q ss_pred             EEeecCCcc
Q 024230          255 TVCIDGGFT  263 (270)
Q Consensus       255 ~i~vdgG~~  263 (270)
                      ++.+|||+.
T Consensus       228 ~~~~dgg~~  236 (237)
T PRK12742        228 MHTIDGAFG  236 (237)
T ss_pred             EEEeCCCcC
Confidence            999999975

>PRK07069 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.1e-39  Score=275.37  Aligned_cols=241  Identities=31%  Similarity=0.498  Sum_probs=212.3

Q ss_pred             EEEecCCCcHHHHHHHHHHHCCCeEEEeeCC-hhHHHHHHHHHHhcC--CeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           23 ALVTGGTKGLGLAVVEELSMLGATVHTCSRT-ETELNECIHHLQMKG--LKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        23 vlItG~s~giG~~la~~l~~~G~~v~l~~r~-~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      ++||||+++||+++++.|+++|++|++++|+ .+.++...+.+....  ..++++.+|++++++++++++++.+.+ +++
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i   80 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAM-GGL   80 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHc-CCc
Confidence            8999999999999999999999999999998 666667766665432  245678899999999999999999988 799


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHHHH
Q 024230          100 NIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQ  179 (270)
Q Consensus       100 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal~~  179 (270)
                      |++|||||....+++.+.+.+++++++++|+.+++.+++.++|.|++++.++||++||..++.+.+++..|+++|+++++
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~Y~~sK~a~~~  160 (251)
T PRK07069         81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVAS  160 (251)
T ss_pred             cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCCchhHHHHHHHHH
Confidence            99999999988888888999999999999999999999999999998878899999999999999999999999999999


Q ss_pred             HHHHHHHHHccCC--ceEEEEecCcccCCCCccccC---ChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCc
Q 024230          180 LAKNLACEWAKDN--IRTNSVAPWYIRTPFTEPLLG---NGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ  254 (270)
Q Consensus       180 ~~~sla~el~~~~--i~v~~v~pG~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  254 (270)
                      ++++++.|+.+++  |+++.|+||+++|++......   .+.....+....+.+++.+|+|+++.++||+++.+.++||+
T Consensus       161 ~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~  240 (251)
T PRK07069        161 LTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLASDESRFVTGA  240 (251)
T ss_pred             HHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCCCCCcCHHHHHHHHHHHcCccccCccCC
Confidence            9999999998765  999999999999998764321   22223334455677888999999999999999989999999


Q ss_pred             EEeecCCccc
Q 024230          255 TVCIDGGFTV  264 (270)
Q Consensus       255 ~i~vdgG~~~  264 (270)
                      .+.+|||+++
T Consensus       241 ~i~~~~g~~~  250 (251)
T PRK07069        241 ELVIDGGICA  250 (251)
T ss_pred             EEEECCCeec
Confidence            9999999875

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=6e-40  Score=274.55  Aligned_cols=233  Identities=30%  Similarity=0.438  Sum_probs=200.9

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      |++++|+++|||++++||++++++|+++|++|++++|++...         ...++.++.+|++++      ++++.+.+
T Consensus         1 ~~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~---------~~~~~~~~~~D~~~~------~~~~~~~~   65 (235)
T PRK06550          1 QEFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD---------LSGNFHFLQLDLSDD------LEPLFDWV   65 (235)
T ss_pred             CCCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc---------cCCcEEEEECChHHH------HHHHHHhh
Confidence            568999999999999999999999999999999999975431         124678899999987      34444445


Q ss_pred             CCcccEEEECCCCCC-CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           96 NGKLNIFVNNVGTSV-LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        96 ~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                       +++|++|||+|... ..++.+.+.+++++++++|+.+++.++++++|.|.+++.++||++||..+..+.++...|+++|
T Consensus        66 -~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  144 (235)
T PRK06550         66 -PSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASK  144 (235)
T ss_pred             -CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcccHHHH
Confidence             78999999999754 3567788999999999999999999999999999888788999999999998888899999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCc
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ  254 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  254 (270)
                      +++++++++++.|+.++||+++.|+||+++|++..................+.+++.+|+|++++++||+++.+.+++|+
T Consensus       145 ~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~g~  224 (235)
T PRK06550        145 HALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETPIKRWAEPEEVAELTLFLASGKADYMQGT  224 (235)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHhccCCcCCCCCHHHHHHHHHHHcChhhccCCCc
Confidence            99999999999999999999999999999999865432233333344556788889999999999999999989999999


Q ss_pred             EEeecCCccc
Q 024230          255 TVCIDGGFTV  264 (270)
Q Consensus       255 ~i~vdgG~~~  264 (270)
                      ++.+|||++.
T Consensus       225 ~~~~~gg~~~  234 (235)
T PRK06550        225 IVPIDGGWTL  234 (235)
T ss_pred             EEEECCceec
Confidence            9999999753

>PRK05875 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-39  Score=276.72  Aligned_cols=248  Identities=28%  Similarity=0.387  Sum_probs=219.5

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK--GLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      +++++|++||||++++||.+++++|+++|++|++++|+++..+...+++...  +.++.++.+|++++++++++++++.+
T Consensus         3 ~~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   82 (276)
T PRK05875          3 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATA   82 (276)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999988877777666544  35788899999999999999999988


Q ss_pred             HcCCcccEEEECCCCCC-CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhh
Q 024230           94 LFNGKLNIFVNNVGTSV-LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSA  172 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~  172 (270)
                      .+ +++|++|||+|... ..++.+.+.++|.+++++|+.+++.+++++.+.|.+++.++|+++||..+..+.+....|++
T Consensus        83 ~~-~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~  161 (276)
T PRK05875         83 WH-GRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGV  161 (276)
T ss_pred             Hc-CCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCCCcchHH
Confidence            88 79999999999753 35677889999999999999999999999999998877789999999999888888899999


Q ss_pred             hHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCcc
Q 024230          173 TKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT  252 (270)
Q Consensus       173 sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  252 (270)
                      +|++++.++++++.++...+|+++.|.||+++|++..................+.++...++|+++++.||++....+++
T Consensus       162 sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  241 (276)
T PRK05875        162 TKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTPLPRVGEVEDVANLAMFLLSDAASWIT  241 (276)
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcCchhcCcC
Confidence            99999999999999999999999999999999998765544333334444566778889999999999999998888999


Q ss_pred             CcEEeecCCccc
Q 024230          253 GQTVCIDGGFTV  264 (270)
Q Consensus       253 G~~i~vdgG~~~  264 (270)
                      |+++.+|||+.+
T Consensus       242 g~~~~~~~g~~~  253 (276)
T PRK05875        242 GQVINVDGGHML  253 (276)
T ss_pred             CCEEEECCCeec
Confidence            999999999886

>PRK12744 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-39  Score=276.71  Aligned_cols=245  Identities=24%  Similarity=0.422  Sum_probs=200.9

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCC----hhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRT----ETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTV   91 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i   91 (270)
                      +++++|+++|||++++||.++|++|+++|++|+++.++    .+..++..++++..+.++.++.+|++++++++++++++
T Consensus         4 ~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (257)
T PRK12744          4 HSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDA   83 (257)
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHH
Confidence            46789999999999999999999999999997776543    34455566666666668889999999999999999999


Q ss_pred             HHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhh
Q 024230           92 SSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYS  171 (270)
Q Consensus        92 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~  171 (270)
                      .+.+ +++|++|||||.....++.+.+.+++++++++|+.+++.+++++.|+|.+  .+++++++|.....+.+.+..|+
T Consensus        84 ~~~~-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~~~iv~~~ss~~~~~~~~~~~Y~  160 (257)
T PRK12744         84 KAAF-GRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLND--NGKIVTLVTSLLGAFTPFYSAYA  160 (257)
T ss_pred             HHhh-CCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc--CCCEEEEecchhcccCCCcccch
Confidence            8888 79999999999977778888999999999999999999999999999864  36777764443334457788999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChh--hHHHHhhcCCCC--CCCChHhHHHHHHHHhCCC
Q 024230          172 ATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGK--FVDEVKSRTPMG--RLGEPKEVSSLVAFLCMPA  247 (270)
Q Consensus       172 ~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~dva~~~~~l~s~~  247 (270)
                      +||+|++.|+++++.|+.++||+|+.++||++.|++.........  .........++.  ++.+|+|+++.+.||+++ 
T Consensus       161 ~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~-  239 (257)
T PRK12744        161 GSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIEDIVPFIRFLVTD-  239 (257)
T ss_pred             hhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhcccccccccccccCCCCCHHHHHHHHHHhhcc-
Confidence            999999999999999999999999999999999997644322111  001111122333  678999999999999996 


Q ss_pred             CCCccCcEEeecCCccc
Q 024230          248 ASYITGQTVCIDGGFTV  264 (270)
Q Consensus       248 ~~~~~G~~i~vdgG~~~  264 (270)
                      ..+++|+++.+|||+..
T Consensus       240 ~~~~~g~~~~~~gg~~~  256 (257)
T PRK12744        240 GWWITGQTILINGGYTT  256 (257)
T ss_pred             cceeecceEeecCCccC
Confidence            67999999999999764

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-39  Score=271.96  Aligned_cols=222  Identities=19%  Similarity=0.196  Sum_probs=194.2

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      |+++||+++|||+++|||+++|++|+++|++|++++|+++.+++..+++...+.++..+.+|++++++++++++++.+++
T Consensus         1 ~~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (227)
T PRK08862          1 MDIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQF   80 (227)
T ss_pred             CCCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHh
Confidence            57899999999999999999999999999999999999999988888887777788899999999999999999999988


Q ss_pred             CC-cccEEEECCCCC-CCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCccccccCCCChhhhh
Q 024230           96 NG-KLNIFVNNVGTS-VLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIVSANVGTVYSA  172 (270)
Q Consensus        96 ~~-~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~~~~~~~~~~~y~~  172 (270)
                       + ++|++|||+|.. ...++.+.+.++|.+.+++|+.+++.+++.++|+|.+++ +|.||++||..+.   +++..|++
T Consensus        81 -g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~---~~~~~Y~a  156 (227)
T PRK08862         81 -NRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH---QDLTGVES  156 (227)
T ss_pred             -CCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC---CCcchhHH
Confidence             6 899999999854 456788899999999999999999999999999998764 6899999997543   55778999


Q ss_pred             hHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCcc
Q 024230          173 TKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT  252 (270)
Q Consensus       173 sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  252 (270)
                      ||+|+++|+++++.|++++||||++|+||+++|+...    .+...+++           .+|++.+..||++  ++++|
T Consensus       157 sKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~~~----~~~~~~~~-----------~~~~~~~~~~l~~--~~~~t  219 (227)
T PRK08862        157 SNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANGEL----DAVHWAEI-----------QDELIRNTEYIVA--NEYFS  219 (227)
T ss_pred             HHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCCcc----CHHHHHHH-----------HHHHHhheeEEEe--ccccc
Confidence            9999999999999999999999999999999998321    11111112           1799999999996  78999


Q ss_pred             CcEEee
Q 024230          253 GQTVCI  258 (270)
Q Consensus       253 G~~i~v  258 (270)
                      |+.+.-
T Consensus       220 g~~~~~  225 (227)
T PRK08862        220 GRVVEA  225 (227)
T ss_pred             ceEEee
Confidence            998753

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=4.3e-39  Score=271.35  Aligned_cols=243  Identities=30%  Similarity=0.481  Sum_probs=213.6

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeC-ChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSR-TETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      .+++|+++|||++++||.++|++|+++|++|+++.+ +++..++..+++...+.++.++.+|++++++++++++++.+.+
T Consensus         3 ~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (247)
T PRK12935          3 QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHF   82 (247)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            478999999999999999999999999999987654 5566666777777667789999999999999999999999988


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKG  175 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKa  175 (270)
                       +++|++|||||......+.+.+.+++++.+++|+.+++.+++++.|.|.+++.+++|++||..+..+.++...|++||+
T Consensus        83 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  161 (247)
T PRK12935         83 -GKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKA  161 (247)
T ss_pred             -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCCCcchHHHHH
Confidence             7999999999998777778889999999999999999999999999998877789999999999888888999999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcE
Q 024230          176 AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT  255 (270)
Q Consensus       176 al~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  255 (270)
                      ++++++++++.|+.+.||+++.++||+++|++.....  ...........+.+++..++|+++++.|++++ .++++|++
T Consensus       162 a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~edva~~~~~~~~~-~~~~~g~~  238 (247)
T PRK12935        162 GMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVP--EEVRQKIVAKIPKKRFGQADEIAKGVVYLCRD-GAYITGQQ  238 (247)
T ss_pred             HHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhcc--HHHHHHHHHhCCCCCCcCHHHHHHHHHHHcCc-ccCccCCE
Confidence            9999999999999999999999999999998765432  22233344456677889999999999999975 46899999


Q ss_pred             EeecCCcc
Q 024230          256 VCIDGGFT  263 (270)
Q Consensus       256 i~vdgG~~  263 (270)
                      +++|||..
T Consensus       239 ~~i~~g~~  246 (247)
T PRK12935        239 LNINGGLY  246 (247)
T ss_pred             EEeCCCcc
Confidence            99999964

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=100.00  E-value=4.2e-39  Score=270.26  Aligned_cols=240  Identities=31%  Similarity=0.434  Sum_probs=215.5

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeC-ChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSR-TETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      |++||||++++||.+++++|+++|++|+++.| +++..++..+++...+.++.++.+|++++++++++++++.+.+ +++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i   79 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAEL-GPI   79 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHc-CCC
Confidence            78999999999999999999999999999888 6666666666666556789999999999999999999999888 799


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHHHH
Q 024230          100 NIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQ  179 (270)
Q Consensus       100 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal~~  179 (270)
                      |++|||+|.....++.+.+.+++++.+++|+.+++.+++++.|.|++.+.++||++||..+..+.+++..|+++|++++.
T Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~a~~~  159 (242)
T TIGR01829        80 DVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIG  159 (242)
T ss_pred             cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCcchhHHHHHHHHH
Confidence            99999999887777888999999999999999999999999999988878899999999998888889999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEEeec
Q 024230          180 LAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCID  259 (270)
Q Consensus       180 ~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vd  259 (270)
                      ++++++.|+.+.|++++.+.||+++|++.....  +.....+....+..+..+|+|+++.+.||++++..+++|+++.+|
T Consensus       160 ~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~  237 (242)
T TIGR01829       160 FTKALAQEGATKGVTVNTISPGYIATDMVMAMR--EDVLNSIVAQIPVGRLGRPEEIAAAVAFLASEEAGYITGATLSIN  237 (242)
T ss_pred             HHHHHHHHhhhhCeEEEEEeeCCCcCccccccc--hHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEec
Confidence            999999999999999999999999999875542  334444555678888999999999999999998899999999999


Q ss_pred             CCcc
Q 024230          260 GGFT  263 (270)
Q Consensus       260 gG~~  263 (270)
                      ||.+
T Consensus       238 gg~~  241 (242)
T TIGR01829       238 GGLY  241 (242)
T ss_pred             CCcc
Confidence            9975

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-39  Score=274.68  Aligned_cols=248  Identities=25%  Similarity=0.406  Sum_probs=217.9

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      .++++|++||||++++||.+++++|+++|++|++++|+++..++..+++...+.++.++.+|+++.++++++++++.+.+
T Consensus         3 ~~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   82 (262)
T PRK13394          3 SNLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERF   82 (262)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            35789999999999999999999999999999999999998888888887777788999999999999999999998888


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHH-HhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLL-RASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m-~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                       +++|++|||+|.....++.+.+.+++++.+++|+.+++.+++.+++.| ++.+.++||++||..+..+.+....|+++|
T Consensus        83 -~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~sk  161 (262)
T PRK13394         83 -GSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAK  161 (262)
T ss_pred             -CCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCCCcccHHHH
Confidence             799999999999877777888999999999999999999999999999 666678999999999988888888999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC---------hhhHHH-HhhcCCCCCCCChHhHHHHHHHHh
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN---------GKFVDE-VKSRTPMGRLGEPKEVSSLVAFLC  244 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~---------~~~~~~-~~~~~~~~~~~~~~dva~~~~~l~  244 (270)
                      +++++++++++.++.+.+|+++.+.||+++|++.......         ...... +....+.+++.+++|+++++++++
T Consensus       162 ~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~  241 (262)
T PRK13394        162 HGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLFLS  241 (262)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHc
Confidence            9999999999999999999999999999999875433211         111111 222445677899999999999999


Q ss_pred             CCCCCCccCcEEeecCCccc
Q 024230          245 MPAASYITGQTVCIDGGFTV  264 (270)
Q Consensus       245 s~~~~~~~G~~i~vdgG~~~  264 (270)
                      +.....++|+++.+|||+.+
T Consensus       242 ~~~~~~~~g~~~~~~~g~~~  261 (262)
T PRK13394        242 SFPSAALTGQSFVVSHGWFM  261 (262)
T ss_pred             CccccCCcCCEEeeCCceec
Confidence            98778899999999999754

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-39  Score=283.67  Aligned_cols=226  Identities=24%  Similarity=0.314  Sum_probs=202.0

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      ++++++|+++|||+++|||+++|++|+++|++|++++|+++.++++.+++...+.++.++.+|++|+++++++++++.+.
T Consensus         2 ~~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~   81 (330)
T PRK06139          2 MGPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASF   81 (330)
T ss_pred             CcCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHh
Confidence            45789999999999999999999999999999999999999999999989888888999999999999999999999888


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                      + +++|++|||||....+++.+.+.+++++++++|+.++++++++++|+|.+++.|+||+++|..+..+.|.+..|++||
T Consensus        82 ~-g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~~~Y~asK  160 (330)
T PRK06139         82 G-GRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASK  160 (330)
T ss_pred             c-CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCchhHHHHH
Confidence            7 799999999999888889999999999999999999999999999999988889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccC-CceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCC
Q 024230          175 GAMNQLAKNLACEWAKD-NIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP  246 (270)
Q Consensus       175 aal~~~~~sla~el~~~-~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (270)
                      +++.+|+++|+.|+.+. ||+|+.|+||+++|++.........     ....+.....+|+++|+.+++++..
T Consensus       161 aal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~~~-----~~~~~~~~~~~pe~vA~~il~~~~~  228 (330)
T PRK06139        161 FGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANYTG-----RRLTPPPPVYDPRRVAKAVVRLADR  228 (330)
T ss_pred             HHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccccccc-----ccccCCCCCCCHHHHHHHHHHHHhC
Confidence            99999999999999875 8999999999999998654211100     0111223467899999999999854

>PRK07774 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.2e-39  Score=271.18  Aligned_cols=246  Identities=26%  Similarity=0.366  Sum_probs=215.4

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      ++++++|+++|||++++||.+++++|+++|++|++++|+++..+++.+++...+.++.++.+|+++.++++++++++.+.
T Consensus         1 ~~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (250)
T PRK07774          1 MGRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSA   80 (250)
T ss_pred             CcccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            35689999999999999999999999999999999999988877777777666667888999999999999999999988


Q ss_pred             cCCcccEEEECCCCCC---CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhh
Q 024230           95 FNGKLNIFVNNVGTSV---LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYS  171 (270)
Q Consensus        95 ~~~~id~li~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~  171 (270)
                      + +++|++|||||...   ..++.+.+.+++++++++|+.+++.+++++.|+|.+.+.++||++||..++.+   ...|+
T Consensus        81 ~-~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~---~~~Y~  156 (250)
T PRK07774         81 F-GGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLY---SNFYG  156 (250)
T ss_pred             h-CCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCC---ccccH
Confidence            8 78999999999854   35667889999999999999999999999999998877789999999877643   56799


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCc
Q 024230          172 ATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI  251 (270)
Q Consensus       172 ~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  251 (270)
                      +||++++++++++++++.+.||+++.++||+++|++...... ...........+..+..+++|+++.+++++++...+.
T Consensus       157 ~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~  235 (250)
T PRK07774        157 LAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTP-KEFVADMVKGIPLSRMGTPEDLVGMCLFLLSDEASWI  235 (250)
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCC-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhhCc
Confidence            999999999999999999999999999999999998765432 2334445556667778899999999999998776788


Q ss_pred             cCcEEeecCCcccc
Q 024230          252 TGQTVCIDGGFTVN  265 (270)
Q Consensus       252 ~G~~i~vdgG~~~~  265 (270)
                      +|+++++|+|.++.
T Consensus       236 ~g~~~~v~~g~~~~  249 (250)
T PRK07774        236 TGQIFNVDGGQIIR  249 (250)
T ss_pred             CCCEEEECCCeecc
Confidence            99999999998764

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-39  Score=272.36  Aligned_cols=246  Identities=28%  Similarity=0.439  Sum_probs=219.1

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      +++|+++|||++++||.+++++|+++|++|++++|+++..+....++...+.++.++.+|++++++++++++++.+.+ +
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~   80 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETF-G   80 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence            578999999999999999999999999999999999998888888887777889999999999999999999999988 7


Q ss_pred             cccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHH
Q 024230           98 KLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAM  177 (270)
Q Consensus        98 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal  177 (270)
                      ++|++|||+|.....++.+.+.+++++.+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|+++|+++
T Consensus        81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~~k~a~  160 (258)
T PRK12429         81 GVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGL  160 (258)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCcchhHHHHHHH
Confidence            89999999999888888889999999999999999999999999999988889999999999999999999999999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC---------h-hhHHHHhhcCCCCCCCChHhHHHHHHHHhCCC
Q 024230          178 NQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN---------G-KFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA  247 (270)
Q Consensus       178 ~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~---------~-~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (270)
                      +++++.++.|+.+.||+++.++||+++|++.......         . .....+....+.+++.+++|+++.+++++++.
T Consensus       161 ~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~  240 (258)
T PRK12429        161 IGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYALFLASFA  240 (258)
T ss_pred             HHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccccCCHHHHHHHHHHHcCcc
Confidence            9999999999999999999999999999876432211         0 11112233345677889999999999999887


Q ss_pred             CCCccCcEEeecCCccc
Q 024230          248 ASYITGQTVCIDGGFTV  264 (270)
Q Consensus       248 ~~~~~G~~i~vdgG~~~  264 (270)
                      ...++|+++.+|||++.
T Consensus       241 ~~~~~g~~~~~~~g~~~  257 (258)
T PRK12429        241 AKGVTGQAWVVDGGWTA  257 (258)
T ss_pred             ccCccCCeEEeCCCEec
Confidence            78899999999999863

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.7e-39  Score=300.30  Aligned_cols=245  Identities=36%  Similarity=0.558  Sum_probs=215.5

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      ..+||+++|||+++|||+++|++|+++|++|++++|+.+.+++..+++   +.++.++.+|++++++++++++++.+.+ 
T Consensus         2 ~~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   77 (520)
T PRK06484          2 KAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL---GPDHHALAMDVSDEAQIREGFEQLHREF-   77 (520)
T ss_pred             CCCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEeccCCHHHHHHHHHHHHHHh-
Confidence            457999999999999999999999999999999999988877665554   4578889999999999999999999998 


Q ss_pred             CcccEEEECCCCCC--CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc-EEEEecCccccccCCCChhhhhh
Q 024230           97 GKLNIFVNNVGTSV--LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAA-SIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        97 ~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g-~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                      +++|+||||||...  ..++.+.+.++|++++++|+.+++.++++++|+|.+++.| +||++||..+..+.++...|+++
T Consensus        78 g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~as  157 (520)
T PRK06484         78 GRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSAS  157 (520)
T ss_pred             CCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHHH
Confidence            79999999999842  3567789999999999999999999999999999876655 99999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChh-hHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCcc
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGK-FVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT  252 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  252 (270)
                      |+++++|+++++.|+.+.||+|+.|+||+++|++......... .........+.++..+|+|+++.+.||+++..++++
T Consensus       158 Kaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~v~~l~~~~~~~~~  237 (520)
T PRK06484        158 KAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFFLASDQASYIT  237 (520)
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcc
Confidence            9999999999999999999999999999999998765432211 122334456777888999999999999999999999


Q ss_pred             CcEEeecCCcccc
Q 024230          253 GQTVCIDGGFTVN  265 (270)
Q Consensus       253 G~~i~vdgG~~~~  265 (270)
                      |+++.+|||+...
T Consensus       238 G~~~~~~gg~~~~  250 (520)
T PRK06484        238 GSTLVVDGGWTVY  250 (520)
T ss_pred             CceEEecCCeecc
Confidence            9999999998644

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=8.1e-39  Score=269.81  Aligned_cols=241  Identities=27%  Similarity=0.377  Sum_probs=208.1

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEe-eCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTC-SRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      .|+++||||++|||..+++.|+++|++|+++ .|+++.++...+++...+.++.++.+|+++.++++++++++.+.+ ++
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~   80 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAF-GR   80 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhc-CC
Confidence            4799999999999999999999999998876 466677777777777777789999999999999999999998887 79


Q ss_pred             ccEEEECCCCCCC-CCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC---CcEEEEecCccccccCCC-Chhhhhh
Q 024230           99 LNIFVNNVGTSVL-KPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG---AASIVLMSSALGIVSANV-GTVYSAT  173 (270)
Q Consensus        99 id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~---~g~ii~iss~~~~~~~~~-~~~y~~s  173 (270)
                      +|++|||||.... .++.+.+.++++.++++|+.+++.+++.+++.|..++   .++||++||..+..+.+. +..|++|
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~~Y~~s  160 (248)
T PRK06947         81 LDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGS  160 (248)
T ss_pred             CCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCCcccHhh
Confidence            9999999998643 4677889999999999999999999999999987653   478999999988877664 4689999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccC
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG  253 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  253 (270)
                      |+++++|+++++.++.+.||+|+.|.||+++|++.... ..+..........|.++..+++|+++.++|++++.+.+++|
T Consensus       161 K~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~e~va~~~~~l~~~~~~~~~G  239 (248)
T PRK06947        161 KGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASG-GQPGRAARLGAQTPLGRAGEADEVAETIVWLLSDAASYVTG  239 (248)
T ss_pred             HHHHHHHHHHHHHHhhhhCcEEEEEeccCccccccccc-CCHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCccccCcCC
Confidence            99999999999999999999999999999999986432 12222333444567778889999999999999998899999


Q ss_pred             cEEeecCCc
Q 024230          254 QTVCIDGGF  262 (270)
Q Consensus       254 ~~i~vdgG~  262 (270)
                      +++.+|||.
T Consensus       240 ~~~~~~gg~  248 (248)
T PRK06947        240 ALLDVGGGR  248 (248)
T ss_pred             ceEeeCCCC
Confidence            999999984

>PRK09186 flagellin modification protein A; Provisional

Probab=100.00  E-value=5.2e-39  Score=272.14  Aligned_cols=239  Identities=26%  Similarity=0.366  Sum_probs=205.5

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK--GLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      +++|+++|||++++||+++|++|+++|++|++++|+++..++..+++...  +..+.++.+|++|++++.++++++.+.+
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   81 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY   81 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999998888877777432  2346677999999999999999999888


Q ss_pred             CCcccEEEECCCCCC---CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCC-------
Q 024230           96 NGKLNIFVNNVGTSV---LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSAN-------  165 (270)
Q Consensus        96 ~~~id~li~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~-------  165 (270)
                       +++|++||||+...   ..++.+.+.+++++.+++|+.+++.++++++|+|++++.++||++||..+..+..       
T Consensus        82 -~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~  160 (256)
T PRK09186         82 -GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGT  160 (256)
T ss_pred             -CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhcccc
Confidence             79999999997642   3467789999999999999999999999999999988788999999987754321       


Q ss_pred             ---CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHH
Q 024230          166 ---VGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAF  242 (270)
Q Consensus       166 ---~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  242 (270)
                         ....|++||+++++++++++.|+.+.||+|+.|+||++.++..      ......+....+..++.+|+|+++.++|
T Consensus       161 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~------~~~~~~~~~~~~~~~~~~~~dva~~~~~  234 (256)
T PRK09186        161 SMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQP------EAFLNAYKKCCNGKGMLDPDDICGTLVF  234 (256)
T ss_pred             ccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCC------HHHHHHHHhcCCccCCCCHHHhhhhHhh
Confidence               1236999999999999999999999999999999999887632      2233344445566778999999999999


Q ss_pred             HhCCCCCCccCcEEeecCCcc
Q 024230          243 LCMPAASYITGQTVCIDGGFT  263 (270)
Q Consensus       243 l~s~~~~~~~G~~i~vdgG~~  263 (270)
                      ++++.+++++|+.+.+|||++
T Consensus       235 l~~~~~~~~~g~~~~~~~g~~  255 (256)
T PRK09186        235 LLSDQSKYITGQNIIVDDGFS  255 (256)
T ss_pred             eeccccccccCceEEecCCcc
Confidence            999989999999999999975

>PRK06198 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.4e-39  Score=271.87  Aligned_cols=248  Identities=27%  Similarity=0.389  Sum_probs=218.6

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCe-EEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGAT-VHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~-v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      .+++|+++|||++++||..++++|+++|++ |++++|+++..++..+++...+.++.++.+|+++++++.++++.+.+.+
T Consensus         3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (260)
T PRK06198          3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAF   82 (260)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            578999999999999999999999999999 9999999888777777776667788889999999999999999998888


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCccccccCCCChhhhhhH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                       +++|++|||+|.....++.+.+.+++++++++|+.+++.++++++|+|.+++ .+++|++||..++.+.++...|+++|
T Consensus        83 -g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK  161 (260)
T PRK06198         83 -GRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCASK  161 (260)
T ss_pred             -CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCcchhHHHH
Confidence             7899999999998777788899999999999999999999999999997654 58999999999988888889999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC-----ChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCC
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG-----NGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAAS  249 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  249 (270)
                      +++++++++++.|+.+.||+++.++||+++|++......     ...+.+......+.++..+++|+++.+.+++++..+
T Consensus       162 ~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~  241 (260)
T PRK06198        162 GALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVARAVAFLLSDESG  241 (260)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCCccCCcCHHHHHHHHHHHcChhhC
Confidence            999999999999999999999999999999987532111     122333344456778889999999999999998889


Q ss_pred             CccCcEEeecCCcccc
Q 024230          250 YITGQTVCIDGGFTVN  265 (270)
Q Consensus       250 ~~~G~~i~vdgG~~~~  265 (270)
                      +++|+++.+|||.+-.
T Consensus       242 ~~~G~~~~~~~~~~~~  257 (260)
T PRK06198        242 LMTGSVIDFDQSVWGA  257 (260)
T ss_pred             CccCceEeECCccccc
Confidence            9999999999997643

>PRK06057 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6e-39  Score=271.92  Aligned_cols=243  Identities=28%  Similarity=0.451  Sum_probs=208.6

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      .|+||+|+||||+++||.+++++|+++|++|++++|+.+..++..+++.     ..++.+|++++++++++++++.+.+ 
T Consensus         4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~-----~~~~~~D~~~~~~~~~~~~~~~~~~-   77 (255)
T PRK06057          4 RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG-----GLFVPTDVTDEDAVNALFDTAAETY-   77 (255)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC-----CcEEEeeCCCHHHHHHHHHHHHHHc-
Confidence            3789999999999999999999999999999999999877666555442     2568899999999999999998887 


Q ss_pred             CcccEEEECCCCCC--CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC-CCChhhhhh
Q 024230           97 GKLNIFVNNVGTSV--LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA-NVGTVYSAT  173 (270)
Q Consensus        97 ~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~-~~~~~y~~s  173 (270)
                      +++|++|||||...  ..++.+.+.+++++.+++|+.+++.+++.++|+|++++.++||++||..+..+. ++...|+++
T Consensus        78 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~~~~Y~~s  157 (255)
T PRK06057         78 GSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTAS  157 (255)
T ss_pred             CCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCCCcchHHH
Confidence            79999999999754  345677899999999999999999999999999988777899999998776665 367789999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC-ChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCcc
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG-NGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT  252 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  252 (270)
                      |+++++++++++.++.+.||+|+.|+||+++|++...... ......+.....+.+++.+|+|+++++.||+++...+++
T Consensus       158 Kaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~  237 (255)
T PRK06057        158 KGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVHVPMGRFAEPEEIAAAVAFLASDDASFIT  237 (255)
T ss_pred             HHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcc
Confidence            9999999999999999999999999999999998765432 122222233355778899999999999999999999999


Q ss_pred             CcEEeecCCcccc
Q 024230          253 GQTVCIDGGFTVN  265 (270)
Q Consensus       253 G~~i~vdgG~~~~  265 (270)
                      |+.+.+|||...-
T Consensus       238 g~~~~~~~g~~~~  250 (255)
T PRK06057        238 ASTFLVDGGISGA  250 (255)
T ss_pred             CcEEEECCCeeee
Confidence            9999999997643

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.8e-38  Score=268.08  Aligned_cols=243  Identities=28%  Similarity=0.414  Sum_probs=211.8

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      |+++||+++|||++++||.++++.|+++|++|++++|++++++...++++..+.++.++.+|+++.++++++++.+.+.+
T Consensus         1 ~~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (253)
T PRK08217          1 MDLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDF   80 (253)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            45889999999999999999999999999999999999988888888887777788999999999999999999998887


Q ss_pred             CCcccEEEECCCCCCCCCC---------CCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEecCccccccCC
Q 024230           96 NGKLNIFVNNVGTSVLKPT---------LEYNAEDFSLVMSTNFESAFHLCQLAHPLLRAS-GAASIVLMSSALGIVSAN  165 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~---------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~ii~iss~~~~~~~~  165 (270)
                       +++|++|||+|......+         .+.+.+++++++++|+.+++.+.+.+.|.|.++ ..+.|+++||.. ..+.+
T Consensus        81 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~-~~~~~  158 (253)
T PRK08217         81 -GQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIA-RAGNM  158 (253)
T ss_pred             -CCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccc-ccCCC
Confidence             799999999997543322         567889999999999999999999999999765 457888888874 45667


Q ss_pred             CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhC
Q 024230          166 VGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCM  245 (270)
Q Consensus       166 ~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (270)
                      +...|++||+++++++++++.|+.++||++++++||+++|++....  .+...+......+.++..+++|+++.+.++++
T Consensus       159 ~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~  236 (253)
T PRK08217        159 GQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAM--KPEALERLEKMIPVGRLGEPEEIAHTVRFIIE  236 (253)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccccc--CHHHHHHHHhcCCcCCCcCHHHHHHHHHHHHc
Confidence            7889999999999999999999999999999999999999987554  23444455566788889999999999999995


Q ss_pred             CCCCCccCcEEeecCCccc
Q 024230          246 PAASYITGQTVCIDGGFTV  264 (270)
Q Consensus       246 ~~~~~~~G~~i~vdgG~~~  264 (270)
                        +.+++|+++.+|||++.
T Consensus       237 --~~~~~g~~~~~~gg~~~  253 (253)
T PRK08217        237 --NDYVTGRVLEIDGGLRL  253 (253)
T ss_pred             --CCCcCCcEEEeCCCccC
Confidence              46889999999999863

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=3.6e-39  Score=273.51  Aligned_cols=235  Identities=21%  Similarity=0.259  Sum_probs=201.4

Q ss_pred             EEEEecCCCcHHHHHHHHHHH----CCCeEEEeeCChhHHHHHHHHHHh--cCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           22 TALVTGGTKGLGLAVVEELSM----LGATVHTCSRTETELNECIHHLQM--KGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~----~G~~v~l~~r~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      +++|||+++|||+++|++|++    +|++|++++|+++.+++..+++..  .+.++.++.+|+++.++++++++++.+.+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            689999999999999999997    799999999999988888888865  24578899999999999999999998876


Q ss_pred             CCc----ccEEEECCCCCCCC--CCCC-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CcEEEEecCccccccCCC
Q 024230           96 NGK----LNIFVNNVGTSVLK--PTLE-YNAEDFSLVMSTNFESAFHLCQLAHPLLRASG--AASIVLMSSALGIVSANV  166 (270)
Q Consensus        96 ~~~----id~li~~ag~~~~~--~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~--~g~ii~iss~~~~~~~~~  166 (270)
                       ++    .|++|||||.....  ...+ .+.++|++.+++|+.+++.+++.++|+|.+++  .++||++||..+..+.++
T Consensus        82 -g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~  160 (256)
T TIGR01500        82 -RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKG  160 (256)
T ss_pred             -ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCC
Confidence             43    36999999975432  2333 35789999999999999999999999998653  479999999999999999


Q ss_pred             ChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC---ChhhHHHHhhcCCCCCCCChHhHHHHHHHH
Q 024230          167 GTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG---NGKFVDEVKSRTPMGRLGEPKEVSSLVAFL  243 (270)
Q Consensus       167 ~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  243 (270)
                      ...|++||+|+++|+++++.|+++.||+|++|+||+++|+|.+...+   .+...+.+....|.++..+|+|+|+.+++|
T Consensus       161 ~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l  240 (256)
T TIGR01500       161 WALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKAKGKLVDPKVSAQKLLSL  240 (256)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHhcCCCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999998764321   223334455667888999999999999999


Q ss_pred             hCCCCCCccCcEEee
Q 024230          244 CMPAASYITGQTVCI  258 (270)
Q Consensus       244 ~s~~~~~~~G~~i~v  258 (270)
                      ++ ..+++||+++.+
T Consensus       241 ~~-~~~~~~G~~~~~  254 (256)
T TIGR01500       241 LE-KDKFKSGAHVDY  254 (256)
T ss_pred             Hh-cCCcCCcceeec
Confidence            96 578999998865

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.9e-38  Score=265.82  Aligned_cols=245  Identities=34%  Similarity=0.524  Sum_probs=219.1

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEe-eCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTC-SRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      |+|++|+++||||+++||.+++++|+++|++|+++ +|+++..++..+.+...+.++.++.+|++++++++++++++.+.
T Consensus         1 ~~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (247)
T PRK05565          1 MKLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEK   80 (247)
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999998 99988887777777766677899999999999999999999888


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                      + +++|++||++|.....++.+.+.+++++.+++|+.+++.+++.+.|.+.+++.+++|++||..+..+.+....|+.+|
T Consensus        81 ~-~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK  159 (247)
T PRK05565         81 F-GKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASK  159 (247)
T ss_pred             h-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCccHHHHHH
Confidence            8 789999999999877777888999999999999999999999999999888788999999999998888899999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCc
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ  254 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  254 (270)
                      ++++.++++++.++...|++++.++||+++|++.+....  ..........+.++..+++|+++.+.+++++....++|+
T Consensus       160 ~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~  237 (247)
T PRK05565        160 GAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSE--EDKEGLAEEIPLGRLGKPEEIAKVVLFLASDDASYITGQ  237 (247)
T ss_pred             HHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccCh--HHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCccCCccCc
Confidence            999999999999999999999999999999988765432  222223334556678899999999999999999999999


Q ss_pred             EEeecCCcc
Q 024230          255 TVCIDGGFT  263 (270)
Q Consensus       255 ~i~vdgG~~  263 (270)
                      .+.+|+|++
T Consensus       238 ~~~~~~~~~  246 (247)
T PRK05565        238 IITVDGGWT  246 (247)
T ss_pred             EEEecCCcc
Confidence            999999975

>PRK06123 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-38  Score=266.48  Aligned_cols=241  Identities=26%  Similarity=0.336  Sum_probs=208.3

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEee-CChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCS-RTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~-r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      +|++||||++++||.+++++|+++|++|+++. |+++..+....++...+.++.++.+|+++.++++++++++.+.+ ++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~   80 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDREL-GR   80 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHh-CC
Confidence            58999999999999999999999999988876 44555666666676666778899999999999999999999888 79


Q ss_pred             ccEEEECCCCCC-CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC---CcEEEEecCccccccCCCC-hhhhhh
Q 024230           99 LNIFVNNVGTSV-LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG---AASIVLMSSALGIVSANVG-TVYSAT  173 (270)
Q Consensus        99 id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~---~g~ii~iss~~~~~~~~~~-~~y~~s  173 (270)
                      +|++|||||... ..++.+.+.++|++++++|+.+++.++++++++|.++.   .|+||++||..+..+.++. ..|+++
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~Y~~s  160 (248)
T PRK06123         81 LDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAAS  160 (248)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCccchHHH
Confidence            999999999864 34677889999999999999999999999999997652   4789999999888887764 579999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccC
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG  253 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  253 (270)
                      |+++++|+++++.|+.+.||+|+.|+||++.|++..... .+.....+....|+++..+++|+++++.|++++...+++|
T Consensus       161 Kaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~d~a~~~~~l~~~~~~~~~g  239 (248)
T PRK06123        161 KGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGG-EPGRVDRVKAGIPMGRGGTAEEVARAILWLLSDEASYTTG  239 (248)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccC-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccC
Confidence            999999999999999999999999999999999764321 2333444556678888899999999999999988889999


Q ss_pred             cEEeecCCc
Q 024230          254 QTVCIDGGF  262 (270)
Q Consensus       254 ~~i~vdgG~  262 (270)
                      +++.+|||.
T Consensus       240 ~~~~~~gg~  248 (248)
T PRK06123        240 TFIDVSGGR  248 (248)
T ss_pred             CEEeecCCC
Confidence            999999973

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=100.00  E-value=1.3e-38  Score=271.81  Aligned_cols=240  Identities=24%  Similarity=0.334  Sum_probs=196.0

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCC-hhHHHHHHHHHHh-cCCeEEEEEccCCCHHHH----HHHHHHHHHH
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRT-ETELNECIHHLQM-KGLKVTGSVCDVSSRPQR----QTLINTVSSL   94 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~-~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~----~~~~~~i~~~   94 (270)
                      ++++||||++|||++++++|+++|++|++++|+ ++.++.+.+++.. .+.++.++.+|++|++++    +++++++.+.
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            689999999999999999999999999998654 5666666666643 245677899999999866    4555555566


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCH-----------HHHHHHHHHhhHHHHHHHHHHHHHHHhc------CCcEEEEecC
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNA-----------EDFSLVMSTNFESAFHLCQLAHPLLRAS------GAASIVLMSS  157 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~m~~~------~~g~ii~iss  157 (270)
                      + +++|+||||||.....++.+.+.           ++|.+++++|+.+++.+++++.|+|++.      ..+.|++++|
T Consensus        82 ~-g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s  160 (267)
T TIGR02685        82 F-GRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCD  160 (267)
T ss_pred             c-CCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehh
Confidence            6 78999999999866555544443           3589999999999999999999999643      2468999999


Q ss_pred             ccccccCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCC-CCCChHhH
Q 024230          158 ALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMG-RLGEPKEV  236 (270)
Q Consensus       158 ~~~~~~~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dv  236 (270)
                      ..+..+.+++..|++||+++++|+++++.|+.+.||+|+.|+||+++|+....    ....+......+.. +..+|+|+
T Consensus       161 ~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~v  236 (267)
T TIGR02685       161 AMTDQPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMP----FEVQEDYRRKVPLGQREASAEQI  236 (267)
T ss_pred             hhccCCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccc----hhHHHHHHHhCCCCcCCCCHHHH
Confidence            99988888999999999999999999999999999999999999998762211    12222333344554 67899999


Q ss_pred             HHHHHHHhCCCCCCccCcEEeecCCcccc
Q 024230          237 SSLVAFLCMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       237 a~~~~~l~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                      ++.++|++++.+++++|+++.+|||+++.
T Consensus       237 a~~~~~l~~~~~~~~~G~~~~v~gg~~~~  265 (267)
T TIGR02685       237 ADVVIFLVSPKAKYITGTCIKVDGGLSLT  265 (267)
T ss_pred             HHHHHHHhCcccCCcccceEEECCceecc
Confidence            99999999999999999999999998765

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=100.00  E-value=7.7e-39  Score=255.06  Aligned_cols=249  Identities=23%  Similarity=0.289  Sum_probs=226.6

Q ss_pred             CCCCCCEEEEecCC--CcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGT--KGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        16 ~~l~gk~vlItG~s--~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      ..|+||++||+|..  .+|+..||+.|.++|++++++...+ ++++..+++.+.-+....++||+++.++++++++++.+
T Consensus         2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~   80 (259)
T COG0623           2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKK   80 (259)
T ss_pred             CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHH
Confidence            57999999999987  6899999999999999999999887 44444444444333467799999999999999999999


Q ss_pred             HcCCcccEEEECCCCCC----CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChh
Q 024230           94 LFNGKLNIFVNNVGTSV----LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTV  169 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~  169 (270)
                      +| +++|++||+.++.+    .+.+.+.+.|.|...+++..++...+.+++.|.|..  +|.||.++-..+.+..|++.-
T Consensus        81 ~~-g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~--ggSiltLtYlgs~r~vPnYNv  157 (259)
T COG0623          81 KW-GKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNN--GGSILTLTYLGSERVVPNYNV  157 (259)
T ss_pred             hh-CcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCC--CCcEEEEEeccceeecCCCch
Confidence            99 89999999999976    467778999999999999999999999999999965  689999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCC
Q 024230          170 YSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAAS  249 (270)
Q Consensus       170 y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  249 (270)
                      .+.+|++|++-+|.||.++++.|||||.|+-||++|--.+.+......++......|++|..+.|||++...||+|+.++
T Consensus       158 MGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aPl~r~vt~eeVG~tA~fLlSdLss  237 (259)
T COG0623         158 MGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPLRRNVTIEEVGNTAAFLLSDLSS  237 (259)
T ss_pred             hHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHHHHHHHHHhhCCccCCCCHHHhhhhHHHHhcchhc
Confidence            99999999999999999999999999999999999988888877788888888999999999999999999999999999


Q ss_pred             CccCcEEeecCCccccccc
Q 024230          250 YITGQTVCIDGGFTVNGFF  268 (270)
Q Consensus       250 ~~~G~~i~vdgG~~~~~~~  268 (270)
                      .+|||++.||+|.++++|.
T Consensus       238 giTGei~yVD~G~~i~~m~  256 (259)
T COG0623         238 GITGEIIYVDSGYHIMGMG  256 (259)
T ss_pred             ccccceEEEcCCceeeccC
Confidence            9999999999999999874

>PRK12746 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-38  Score=267.04  Aligned_cols=245  Identities=28%  Similarity=0.444  Sum_probs=214.4

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEe-eCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTC-SRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      ++++|+++|||++++||.++|++|+++|++|+++ .|+.+..++..+.+...+.++.++.+|++|++++.++++++.+.+
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~   82 (254)
T PRK12746          3 NLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNEL   82 (254)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHh
Confidence            4778999999999999999999999999998774 788777777777776556678899999999999999999998876


Q ss_pred             C-----CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhh
Q 024230           96 N-----GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVY  170 (270)
Q Consensus        96 ~-----~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y  170 (270)
                      +     +++|++|||||....+++.+.+.+.|++++++|+.+++.+++++.|+|.+.  +++|++||..+..+.+++..|
T Consensus        83 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~v~~sS~~~~~~~~~~~~Y  160 (254)
T PRK12746         83 QIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAE--GRVINISSAEVRLGFTGSIAY  160 (254)
T ss_pred             ccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC--CEEEEECCHHhcCCCCCCcch
Confidence            2     369999999998877778888999999999999999999999999998653  699999999998888999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCC
Q 024230          171 SATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY  250 (270)
Q Consensus       171 ~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  250 (270)
                      ++||++++++++++++++.+.|++++.+.||+++|++.......+..........+.++..+++|+++.+.+++++...+
T Consensus       161 ~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  240 (254)
T PRK12746        161 GLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVEDIADAVAFLASSDSRW  240 (254)
T ss_pred             HhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHHHHHhcCCcCCCCCHHHHHHHHHHHcCcccCC
Confidence            99999999999999999999999999999999999987765444444343444556778889999999999999987788


Q ss_pred             ccCcEEeecCCcc
Q 024230          251 ITGQTVCIDGGFT  263 (270)
Q Consensus       251 ~~G~~i~vdgG~~  263 (270)
                      ++|+.+.++||.+
T Consensus       241 ~~g~~~~i~~~~~  253 (254)
T PRK12746        241 VTGQIIDVSGGFC  253 (254)
T ss_pred             cCCCEEEeCCCcc
Confidence            9999999999964

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=5.2e-38  Score=265.97  Aligned_cols=244  Identities=29%  Similarity=0.452  Sum_probs=210.9

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh-hHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTE-TELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      .|+++|||++++||.+++++|+++|++|++++|+. +..++..+.++..+.++.++.+|+++++++.++++++.+.+ ++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~   80 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAW-GR   80 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhc-CC
Confidence            48999999999999999999999999999999864 44555666666666789999999999999999999999988 78


Q ss_pred             ccEEEECCCCCC--CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC------CcEEEEecCccccccCCCChhh
Q 024230           99 LNIFVNNVGTSV--LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG------AASIVLMSSALGIVSANVGTVY  170 (270)
Q Consensus        99 id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~------~g~ii~iss~~~~~~~~~~~~y  170 (270)
                      +|++|||+|...  ..++.+.+.+++++.+++|+.+++.+++++.+.|.++.      .++||++||..+..+.+....|
T Consensus        81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y  160 (256)
T PRK12745         81 IDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEY  160 (256)
T ss_pred             CCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCccc
Confidence            999999999853  35677889999999999999999999999999998764      3569999999999888888999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhh-cCCCCCCCChHhHHHHHHHHhCCCCC
Q 024230          171 SATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKS-RTPMGRLGEPKEVSSLVAFLCMPAAS  249 (270)
Q Consensus       171 ~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dva~~~~~l~s~~~~  249 (270)
                      ++||+++++++++++.|+.+.||+++.|+||++.|++......  .....+.. ..|..++..++|+++++.+++++...
T Consensus       161 ~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~a~~i~~l~~~~~~  238 (256)
T PRK12745        161 CISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTA--KYDALIAKGLVPMPRWGEPEDVARAVAALASGDLP  238 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccch--hHHhhhhhcCCCcCCCcCHHHHHHHHHHHhCCccc
Confidence            9999999999999999999999999999999999998765422  22222222 35677788999999999999998888


Q ss_pred             CccCcEEeecCCccccc
Q 024230          250 YITGQTVCIDGGFTVNG  266 (270)
Q Consensus       250 ~~~G~~i~vdgG~~~~~  266 (270)
                      +++|+.+.+|||.+.+.
T Consensus       239 ~~~G~~~~i~gg~~~~~  255 (256)
T PRK12745        239 YSTGQAIHVDGGLSIPR  255 (256)
T ss_pred             ccCCCEEEECCCeeccc
Confidence            99999999999988753

>PRK05884 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.1e-39  Score=265.76  Aligned_cols=214  Identities=26%  Similarity=0.295  Sum_probs=181.3

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcccE
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNI  101 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~  101 (270)
                      +++||||++|||+++++.|+++|++|++++|+++++++..+++     .+.++.+|++++++++++++++.    +++|+
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~----~~id~   72 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL-----DVDAIVCDNTDPASLEEARGLFP----HHLDT   72 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCcEEecCCCCHHHHHHHHHHHh----hcCcE
Confidence            5999999999999999999999999999999988876665544     25578899999999999887763    36899


Q ss_pred             EEECCCCCCC------CCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHH
Q 024230          102 FVNNVGTSVL------KPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKG  175 (270)
Q Consensus       102 li~~ag~~~~------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKa  175 (270)
                      +|||+|....      .++.+ +.++|++++++|+.+++.++++++|+|++  .|+||+++|..    .+....|++||+
T Consensus        73 lv~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~Iv~isS~~----~~~~~~Y~asKa  145 (223)
T PRK05884         73 IVNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS--GGSIISVVPEN----PPAGSAEAAIKA  145 (223)
T ss_pred             EEECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCeEEEEecCC----CCCccccHHHHH
Confidence            9999985321      12333 57899999999999999999999999964  48999999976    355678999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcE
Q 024230          176 AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT  255 (270)
Q Consensus       176 al~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  255 (270)
                      |+++|+|+++.|++++||+|++|+||+++|++....           ...|   ...|+|+++.+.||+++.++++||++
T Consensus       146 al~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~~-----------~~~p---~~~~~~ia~~~~~l~s~~~~~v~G~~  211 (223)
T PRK05884        146 ALSNWTAGQAAVFGTRGITINAVACGRSVQPGYDGL-----------SRTP---PPVAAEIARLALFLTTPAARHITGQT  211 (223)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecCccCchhhhhc-----------cCCC---CCCHHHHHHHHHHHcCchhhccCCcE
Confidence            999999999999999999999999999999864221           0122   23899999999999999999999999


Q ss_pred             EeecCCcccc
Q 024230          256 VCIDGGFTVN  265 (270)
Q Consensus       256 i~vdgG~~~~  265 (270)
                      +.+|||+.++
T Consensus       212 i~vdgg~~~~  221 (223)
T PRK05884        212 LHVSHGALAH  221 (223)
T ss_pred             EEeCCCeecc
Confidence            9999999875

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=2.3e-38  Score=267.17  Aligned_cols=225  Identities=19%  Similarity=0.245  Sum_probs=196.5

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCC-eEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGL-KVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      |+++||||++|||+++|++|+ +|++|++++|+++++++..+++++.+. ++.++.+|++|+++++++++++.+.+ +++
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~i   78 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELA-GEI   78 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhc-CCC
Confidence            579999999999999999999 599999999999999988888877654 47889999999999999999999888 899


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCccccccCCCChhhhhhHHHHH
Q 024230          100 NIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIVSANVGTVYSATKGAMN  178 (270)
Q Consensus       100 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~~~~~~~~~~~y~~sKaal~  178 (270)
                      |++|||||.....++.+.+.+++.+++++|+.+++.+++.++|+|.+++ .|+||++||..+..+.++...|++||+|++
T Consensus        79 d~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~  158 (246)
T PRK05599         79 SLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKAGLD  158 (246)
T ss_pred             CEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHHHHH
Confidence            9999999987665666777888899999999999999999999998764 689999999999999889999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEEee
Q 024230          179 QLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCI  258 (270)
Q Consensus       179 ~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~v  258 (270)
                      +|+++++.|+.++||+|++|+||+++|++......             .+...+|+|+++.++++++....   ++.+.+
T Consensus       159 ~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~~-------------~~~~~~pe~~a~~~~~~~~~~~~---~~~~~~  222 (246)
T PRK05599        159 AFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMKP-------------APMSVYPRDVAAAVVSAITSSKR---STTLWI  222 (246)
T ss_pred             HHHHHHHHHhcCCCceEEEecCCcccchhhcCCCC-------------CCCCCCHHHHHHHHHHHHhcCCC---CceEEe
Confidence            99999999999999999999999999998644321             11235899999999999976432   566888


Q ss_pred             cCCcc
Q 024230          259 DGGFT  263 (270)
Q Consensus       259 dgG~~  263 (270)
                      ++++.
T Consensus       223 ~~~~~  227 (246)
T PRK05599        223 PGRLR  227 (246)
T ss_pred             CccHH
Confidence            87764

>PRK08703 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-38  Score=264.67  Aligned_cols=233  Identities=23%  Similarity=0.270  Sum_probs=203.7

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcC-CeEEEEEccCCC--HHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG-LKVTGSVCDVSS--RPQRQTLINTVS   92 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~--~~~~~~~~~~i~   92 (270)
                      -+|++|+++|||++++||++++++|+++|++|++++|+++.++...+++...+ .++.++.+|+++  .+++.++++++.
T Consensus         2 ~~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~   81 (239)
T PRK08703          2 ATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIA   81 (239)
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999998888877776543 457788999975  568899999998


Q ss_pred             HHcCCcccEEEECCCCCC-CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhh
Q 024230           93 SLFNGKLNIFVNNVGTSV-LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYS  171 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~  171 (270)
                      +.+.+++|++|||||... ..++.+.+.++|++.+++|+.+++.++++++|.|.+.+.+++++++|..+..+.++...|+
T Consensus        82 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~  161 (239)
T PRK08703         82 EATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFG  161 (239)
T ss_pred             HHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCCccchH
Confidence            887568999999999753 4677889999999999999999999999999999887778999999999999888889999


Q ss_pred             hhHHHHHHHHHHHHHHHccC-CceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCC
Q 024230          172 ATKGAMNQLAKNLACEWAKD-NIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY  250 (270)
Q Consensus       172 ~sKaal~~~~~sla~el~~~-~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  250 (270)
                      +||++++.|+++++.|+.++ +|+|+.|.||+++|++.........          ..+..+++|+++.++|++++.+.+
T Consensus       162 ~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~  231 (239)
T PRK08703        162 ASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPGEA----------KSERKSYGDVLPAFVWWASAESKG  231 (239)
T ss_pred             HhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccCCCCC----------ccccCCHHHHHHHHHHHhCccccC
Confidence            99999999999999999987 6999999999999998654322111          112458999999999999999999


Q ss_pred             ccCcEEee
Q 024230          251 ITGQTVCI  258 (270)
Q Consensus       251 ~~G~~i~v  258 (270)
                      +||++|.|
T Consensus       232 ~~g~~~~~  239 (239)
T PRK08703        232 RSGEIVYL  239 (239)
T ss_pred             cCCeEeeC
Confidence            99999875

>PRK09134 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-37  Score=264.47  Aligned_cols=243  Identities=22%  Similarity=0.279  Sum_probs=208.5

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCC-hhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRT-ETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      ++..+|+++|||++++||++++++|+++|++|+++.++ .+..+....++...+.++.++.+|++|.+++.++++++...
T Consensus         5 ~~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~   84 (258)
T PRK09134          5 SMAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAA   84 (258)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            34568999999999999999999999999999887664 55666677777666778899999999999999999999888


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                      + +++|++|||||.....++.+.+.+++++++++|+.+++.+++++.++|.+...+++|+++|..+..+.+.+..|++||
T Consensus        85 ~-~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~~~~Y~~sK  163 (258)
T PRK09134         85 L-GPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPDFLSYTLSK  163 (258)
T ss_pred             c-CCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCCchHHHHHH
Confidence            8 799999999998877788889999999999999999999999999999887778999999987877778888999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCc
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ  254 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  254 (270)
                      +++++++++++.++.+. |+|++|+||++.|.....    ...........+.++..+++|+++++.++++  ..+++|+
T Consensus       164 ~a~~~~~~~la~~~~~~-i~v~~i~PG~v~t~~~~~----~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~--~~~~~g~  236 (258)
T PRK09134        164 AALWTATRTLAQALAPR-IRVNAIGPGPTLPSGRQS----PEDFARQHAATPLGRGSTPEEIAAAVRYLLD--APSVTGQ  236 (258)
T ss_pred             HHHHHHHHHHHHHhcCC-cEEEEeecccccCCcccC----hHHHHHHHhcCCCCCCcCHHHHHHHHHHHhc--CCCcCCC
Confidence            99999999999999876 999999999998864321    1112223334567778899999999999996  4578999


Q ss_pred             EEeecCCccccc
Q 024230          255 TVCIDGGFTVNG  266 (270)
Q Consensus       255 ~i~vdgG~~~~~  266 (270)
                      .+.+|||.++.+
T Consensus       237 ~~~i~gg~~~~~  248 (258)
T PRK09134        237 MIAVDGGQHLAW  248 (258)
T ss_pred             EEEECCCeeccc
Confidence            999999987665

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=1.3e-37  Score=261.72  Aligned_cols=247  Identities=31%  Similarity=0.490  Sum_probs=218.0

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChh-HHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTET-ELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      |++++|+++|||++|+||++++++|+++|++|+++.|+.+ ..+...+++...+.++.++.+|+++.++++++++++.+.
T Consensus         1 ~~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (248)
T PRK05557          1 MSLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAE   80 (248)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4678899999999999999999999999999988877655 455666666666778899999999999999999999888


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                      + +++|++||++|.....+..+.+.+++++.+++|+.+++.+.+++.+++.+.+.++++++||..+..+.++...|+++|
T Consensus        81 ~-~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~~~y~~sk  159 (248)
T PRK05557         81 F-GGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASK  159 (248)
T ss_pred             c-CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCCchhHHHH
Confidence            7 789999999999877777888999999999999999999999999999887778999999998888888899999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCc
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ  254 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  254 (270)
                      ++++.+++.++.++.+.|++++.++||++++++....  .+..........+.++..+++|+++.+.+++++...+++|+
T Consensus       160 ~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~  237 (248)
T PRK05557        160 AGVIGFTKSLARELASRGITVNAVAPGFIETDMTDAL--PEDVKEAILAQIPLGRLGQPEEIASAVAFLASDEAAYITGQ  237 (248)
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEecCccCCcccccc--ChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCcccc
Confidence            9999999999999999999999999999999887654  23333444455677778899999999999998878899999


Q ss_pred             EEeecCCcccc
Q 024230          255 TVCIDGGFTVN  265 (270)
Q Consensus       255 ~i~vdgG~~~~  265 (270)
                      .+.+|||++++
T Consensus       238 ~~~i~~~~~~~  248 (248)
T PRK05557        238 TLHVNGGMVMG  248 (248)
T ss_pred             EEEecCCccCC
Confidence            99999999874

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-38  Score=270.21  Aligned_cols=229  Identities=24%  Similarity=0.337  Sum_probs=197.9

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      .+++||+++|||+++|||+++|++|+++|++|++++|+++.+++..+++...+.++.++.+|++|+++++++++++.+.+
T Consensus         2 ~~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   81 (275)
T PRK05876          2 DGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLL   81 (275)
T ss_pred             CCcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            35889999999999999999999999999999999999998888888887767788999999999999999999999888


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCccccccCCCChhhhhhH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                       +++|++|||||....+++.+.+.++|++++++|+.+++.++++++|.|.+++ .|+||++||..++.+.++...|++||
T Consensus        82 -g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  160 (275)
T PRK05876         82 -GHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAK  160 (275)
T ss_pred             -CCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchHHHHH
Confidence             7999999999998788889999999999999999999999999999998765 68999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCCh--hhHH-----HHhhcCCCCCCCChHhHHHHHHHHhC
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNG--KFVD-----EVKSRTPMGRLGEPKEVSSLVAFLCM  245 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~--~~~~-----~~~~~~~~~~~~~~~dva~~~~~l~s  245 (270)
                      +++++|+++++.|+.++||+|++|+||+++|++........  ....     ............+|+|+++.++..+.
T Consensus       161 ~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ai~  238 (275)
T PRK05876        161 YGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAIL  238 (275)
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCCHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999764421100  0000     00000112346789999999987773

>PRK07060 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.4e-38  Score=262.94  Aligned_cols=240  Identities=28%  Similarity=0.403  Sum_probs=208.0

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      ++++++|+++|||++++||.++++.|+++|++|++++|+++..++..+..     ...++.+|+++.++++++++.    
T Consensus         4 ~~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~----   74 (245)
T PRK07060          4 AFDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-----GCEPLRLDVGDDAAIRAALAA----   74 (245)
T ss_pred             ccccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCeEEEecCCCHHHHHHHHHH----
Confidence            35688999999999999999999999999999999999987766554432     245678999999988887765    


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCccccccCCCChhhhhh
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                      + +++|++|||+|.....+..+.+.+++++.+++|+.+++.+++++.+.+.+++ .++||++||..++.+.+....|+++
T Consensus        75 ~-~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~s  153 (245)
T PRK07060         75 A-GAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCAS  153 (245)
T ss_pred             h-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCCcHhHHH
Confidence            3 6899999999998777777889999999999999999999999999987654 4799999999999998899999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccC
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG  253 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  253 (270)
                      |++++.++++++.++.+.||+++.++||+++|++.............+....+.+++.+++|+++++.+++++...+++|
T Consensus       154 K~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~G  233 (245)
T PRK07060        154 KAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILFLLSDAASMVSG  233 (245)
T ss_pred             HHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCccC
Confidence            99999999999999999999999999999999986543333333344555667888999999999999999988899999


Q ss_pred             cEEeecCCccc
Q 024230          254 QTVCIDGGFTV  264 (270)
Q Consensus       254 ~~i~vdgG~~~  264 (270)
                      +.+.+|||++.
T Consensus       234 ~~~~~~~g~~~  244 (245)
T PRK07060        234 VSLPVDGGYTA  244 (245)
T ss_pred             cEEeECCCccC
Confidence            99999999864

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=100.00  E-value=2.4e-37  Score=260.79  Aligned_cols=247  Identities=34%  Similarity=0.487  Sum_probs=219.8

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      ++++|+++||||+++||++++++|+++|++|++++|+.+......+++...+.++.++.+|++|+++++++++++.+.+ 
T Consensus         3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-   81 (251)
T PRK12826          3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDF-   81 (251)
T ss_pred             CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh-
Confidence            4678999999999999999999999999999999999888877777777767779999999999999999999999988 


Q ss_pred             CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccc-ccCCCChhhhhhHH
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGI-VSANVGTVYSATKG  175 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~-~~~~~~~~y~~sKa  175 (270)
                      +++|++|||+|.....++.+.+.+++++.++.|+.+++.+++.+.|.|.+++.++||++||..+. .+.+....|+.+|+
T Consensus        82 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~~y~~sK~  161 (251)
T PRK12826         82 GRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASKA  161 (251)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCCccHHHHHHH
Confidence            79999999999987778888899999999999999999999999999988878899999999988 77788889999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcE
Q 024230          176 AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT  255 (270)
Q Consensus       176 al~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  255 (270)
                      ++++++++++.++.+.|++++.+.||++++++...... ...........|.+++.+++|+++.+++++++...+++|+.
T Consensus       162 a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~  240 (251)
T PRK12826        162 GLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGD-AQWAEAIAAAIPLGRLGEPEDIAAAVLFLASDEARYITGQT  240 (251)
T ss_pred             HHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCc-hHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcCCcE
Confidence            99999999999999999999999999999987655432 11123344456777889999999999999988788899999


Q ss_pred             EeecCCcccc
Q 024230          256 VCIDGGFTVN  265 (270)
Q Consensus       256 i~vdgG~~~~  265 (270)
                      +.+|||.+..
T Consensus       241 ~~~~~g~~~~  250 (251)
T PRK12826        241 LPVDGGATLP  250 (251)
T ss_pred             EEECCCccCC
Confidence            9999998753

>PRK12827 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-37  Score=261.19  Aligned_cols=241  Identities=34%  Similarity=0.505  Sum_probs=211.1

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeC----ChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSR----TETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      ++++|+++||||+++||+++|++|+++|++|++++|    +++..+++.+++...+.++.++.+|+++.++++++++++.
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   82 (249)
T PRK12827          3 SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGV   82 (249)
T ss_pred             CcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            578899999999999999999999999999998665    4455555666666666788999999999999999999998


Q ss_pred             HHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHH-HHHHhcCCcEEEEecCccccccCCCChhhh
Q 024230           93 SLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAH-PLLRASGAASIVLMSSALGIVSANVGTVYS  171 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~m~~~~~g~ii~iss~~~~~~~~~~~~y~  171 (270)
                      +.+ +++|++|||+|.....++.+.+.++|++.+++|+.+++.+++++. +.|++++.+++|++||..+..+.++...|+
T Consensus        83 ~~~-~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~  161 (249)
T PRK12827         83 EEF-GRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYA  161 (249)
T ss_pred             HHh-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCCCchhH
Confidence            887 789999999999887888899999999999999999999999999 666666668999999999998888999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCc
Q 024230          172 ATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI  251 (270)
Q Consensus       172 ~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  251 (270)
                      .+|++++.++++++.++.+.|++++.++||+++|++......    ........+..+..+++|+++.+++++++...++
T Consensus       162 ~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~  237 (249)
T PRK12827        162 ASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAP----TEHLLNPVPVQRLGEPDEVAALVAFLVSDAASYV  237 (249)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccch----HHHHHhhCCCcCCcCHHHHHHHHHHHcCcccCCc
Confidence            999999999999999999999999999999999997654321    1233344566677799999999999999888999


Q ss_pred             cCcEEeecCCc
Q 024230          252 TGQTVCIDGGF  262 (270)
Q Consensus       252 ~G~~i~vdgG~  262 (270)
                      +|+++.+|||.
T Consensus       238 ~g~~~~~~~g~  248 (249)
T PRK12827        238 TGQVIPVDGGF  248 (249)
T ss_pred             cCcEEEeCCCC
Confidence            99999999985

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-38  Score=277.21  Aligned_cols=226  Identities=21%  Similarity=0.300  Sum_probs=201.6

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      ..+++|+++||||++|||++++++|+++|++|++++|+++.+++..+++...+.++.++.+|++|+++++++++++.+.+
T Consensus         4 ~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~   83 (334)
T PRK07109          4 KPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEEL   83 (334)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHC
Confidence            46789999999999999999999999999999999999999988888888878889999999999999999999999988


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKG  175 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKa  175 (270)
                       +++|++|||+|.....++.+.+.+++++++++|+.+++.+++.++|+|.+++.|+||++||..++.+.+.+..|++||+
T Consensus        84 -g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asK~  162 (334)
T PRK07109         84 -GPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKH  162 (334)
T ss_pred             -CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcchHHHHHHH
Confidence             7999999999988778888999999999999999999999999999999887899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHcc--CCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCC
Q 024230          176 AMNQLAKNLACEWAK--DNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA  247 (270)
Q Consensus       176 al~~~~~sla~el~~--~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (270)
                      ++++|+++++.|+..  .+|+++.|+||+++|++......  . .  .....+..+..+|+|+|+.+++++++.
T Consensus       163 a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~--~-~--~~~~~~~~~~~~pe~vA~~i~~~~~~~  231 (334)
T PRK07109        163 AIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARS--R-L--PVEPQPVPPIYQPEVVADAILYAAEHP  231 (334)
T ss_pred             HHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhh--h-c--cccccCCCCCCCHHHHHHHHHHHHhCC
Confidence            999999999999975  46999999999999987543210  0 0  011224456789999999999999753

>PRK07074 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.4e-37  Score=260.07  Aligned_cols=242  Identities=25%  Similarity=0.359  Sum_probs=210.5

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      +|+++|||++++||++++++|+++|++|++++|+.+..+.+.+.+.  +.++.++.+|++|.+++..+++++.+++ +++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~   78 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG--DARFVPVACDLTDAASLAAALANAAAER-GPV   78 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHc-CCC
Confidence            6899999999999999999999999999999999988877776663  3568889999999999999999999888 789


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHHHH
Q 024230          100 NIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQ  179 (270)
Q Consensus       100 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal~~  179 (270)
                      |++|||+|.....++.+.+.++|.+.+++|+.+++.+++++.+.|.+++.++||++||..+... .+...|+.+|++++.
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-~~~~~y~~sK~a~~~  157 (257)
T PRK07074         79 DVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAA-LGHPAYSAAKAGLIH  157 (257)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCC-CCCcccHHHHHHHHH
Confidence            9999999987777788889999999999999999999999999998887889999999876543 456789999999999


Q ss_pred             HHHHHHHHHccCCceEEEEecCcccCCCCccccC-ChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEEee
Q 024230          180 LAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG-NGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCI  258 (270)
Q Consensus       180 ~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~v  258 (270)
                      ++++++.|+.++||+|+.++||+++|++...... .+..........+..++..++|+++++++|+++...+++|+.+.+
T Consensus       158 ~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~  237 (257)
T PRK07074        158 YTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAVLFLASPAARAITGVCLPV  237 (257)
T ss_pred             HHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhcCcCCcEEEe
Confidence            9999999999999999999999999987543221 223333333345677889999999999999998888999999999


Q ss_pred             cCCcccc
Q 024230          259 DGGFTVN  265 (270)
Q Consensus       259 dgG~~~~  265 (270)
                      |||.+..
T Consensus       238 ~~g~~~~  244 (257)
T PRK07074        238 DGGLTAG  244 (257)
T ss_pred             CCCcCcC
Confidence            9998753

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=7.5e-37  Score=256.78  Aligned_cols=246  Identities=36%  Similarity=0.492  Sum_probs=219.4

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      |++++|+++|||++++||+.++++|+++|++|++++|++++.+....++...+.++.++.+|+++++++.++++++...+
T Consensus         1 ~~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (246)
T PRK05653          1 MSLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAF   80 (246)
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            46778999999999999999999999999999999999988888788787777889999999999999999999998887


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKG  175 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKa  175 (270)
                       +++|++||++|.....+..+.+.+++++.++.|+.+++++++++.|+|.+.+.++||++||..+..+.+....|+.+|+
T Consensus        81 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~  159 (246)
T PRK05653         81 -GALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKA  159 (246)
T ss_pred             -CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCCCcHhHhHHH
Confidence             7999999999987777788899999999999999999999999999998887789999999988888888889999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcE
Q 024230          176 AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT  255 (270)
Q Consensus       176 al~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  255 (270)
                      +++.+++++++++.+.|++++.+.||.+.+++.....  ....+......+.++..+++|+++.+.+++++....++|++
T Consensus       160 ~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~  237 (246)
T PRK05653        160 GVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLP--EEVKAEILKEIPLGRLGQPEEVANAVAFLASDAASYITGQV  237 (246)
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhh--HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCE
Confidence            9999999999999999999999999999998764321  12223344456677888999999999999998888999999


Q ss_pred             EeecCCccc
Q 024230          256 VCIDGGFTV  264 (270)
Q Consensus       256 i~vdgG~~~  264 (270)
                      +.++||.++
T Consensus       238 ~~~~gg~~~  246 (246)
T PRK05653        238 IPVNGGMYM  246 (246)
T ss_pred             EEeCCCeeC
Confidence            999999863

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=6.7e-37  Score=258.49  Aligned_cols=246  Identities=31%  Similarity=0.428  Sum_probs=209.1

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeC-ChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSR-TETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      +|++++|++|||||+++||++++++|+++|++|++..| +.+......+.+...+.++.++.+|++++++++++++++.+
T Consensus         1 ~~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (252)
T PRK06077          1 MYSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATID   80 (252)
T ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHH
Confidence            36788999999999999999999999999999887765 44555555666766677888999999999999999999999


Q ss_pred             HcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhh
Q 024230           94 LFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                      .+ +++|++|||||.....++.+.+.+.+++.+++|+.+.+.+++++.|+|++  .++||++||..++.+.++...|++|
T Consensus        81 ~~-~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~~s  157 (252)
T PRK06077         81 RY-GVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE--GGAIVNIASVAGIRPAYGLSIYGAM  157 (252)
T ss_pred             Hc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc--CcEEEEEcchhccCCCCCchHHHHH
Confidence            88 79999999999977778888899999999999999999999999999965  3799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChh-hHHH-HhhcCCCCCCCChHhHHHHHHHHhCCCCCCc
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGK-FVDE-VKSRTPMGRLGEPKEVSSLVAFLCMPAASYI  251 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  251 (270)
                      |+++++++++++.|+.+ +|+++.+.||+++|++......... ..+. .....+.+++.+|+|++++++++++.  ...
T Consensus       158 K~~~~~~~~~l~~~~~~-~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~--~~~  234 (252)
T PRK06077        158 KAAVINLTKYLALELAP-KIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEFVAAILKI--ESI  234 (252)
T ss_pred             HHHHHHHHHHHHHHHhc-CCEEEEEeeCCccChHHHhhhhcccccHHHHHHhcCcCCCCCCHHHHHHHHHHHhCc--ccc
Confidence            99999999999999988 8999999999999997644322111 0111 12224456789999999999999963  467


Q ss_pred             cCcEEeecCCccccc
Q 024230          252 TGQTVCIDGGFTVNG  266 (270)
Q Consensus       252 ~G~~i~vdgG~~~~~  266 (270)
                      +|+++.+|+|+++..
T Consensus       235 ~g~~~~i~~g~~~~~  249 (252)
T PRK06077        235 TGQVFVLDSGESLKG  249 (252)
T ss_pred             CCCeEEecCCeeccC
Confidence            999999999998864

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=100.00  E-value=4.6e-37  Score=291.48  Aligned_cols=251  Identities=23%  Similarity=0.302  Sum_probs=217.6

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK--GLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      ..|+||++|||||++|||+++|++|+++|++|++++|+.+.++...+.+...  ..++..+.+|++|+++++++++++.+
T Consensus       410 ~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~  489 (676)
T TIGR02632       410 KTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVAL  489 (676)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999998887776666542  23678899999999999999999999


Q ss_pred             HcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCccccccCCCChhhhh
Q 024230           94 LFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIVSANVGTVYSA  172 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~~~~~~~~~~~y~~  172 (270)
                      .+ +++|++|||||.....++.+.+.++|+..+++|+.+++.+++.++|.|++++ .++||++||..+..+.++...|++
T Consensus       490 ~~-g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~~~aY~a  568 (676)
T TIGR02632       490 AY-GGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSA  568 (676)
T ss_pred             hc-CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCCCHHHHH
Confidence            88 8999999999987778888899999999999999999999999999998765 579999999999999899999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCceEEEEecCcccCC--CCcc-ccC---------ChhhHHHHhhcCCCCCCCChHhHHHHH
Q 024230          173 TKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTP--FTEP-LLG---------NGKFVDEVKSRTPMGRLGEPKEVSSLV  240 (270)
Q Consensus       173 sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~--~~~~-~~~---------~~~~~~~~~~~~~~~~~~~~~dva~~~  240 (270)
                      ||+++++++++++.|+++.||+||+|+||++.++  +... +..         .....+....+.++++..+|+|+++++
T Consensus       569 SKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~peDVA~av  648 (676)
T TIGR02632       569 AKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFPADIAEAV  648 (676)
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcCCCcCHHHHHHHH
Confidence            9999999999999999999999999999998642  2211 110         111122345677889999999999999


Q ss_pred             HHHhCCCCCCccCcEEeecCCcccccc
Q 024230          241 AFLCMPAASYITGQTVCIDGGFTVNGF  267 (270)
Q Consensus       241 ~~l~s~~~~~~~G~~i~vdgG~~~~~~  267 (270)
                      .||+++...++||+++.+|||++...+
T Consensus       649 ~~L~s~~~~~~TG~~i~vDGG~~~~~~  675 (676)
T TIGR02632       649 FFLASSKSEKTTGCIITVDGGVPAAFL  675 (676)
T ss_pred             HHHhCCcccCCcCcEEEECCCchhccc
Confidence            999998888999999999999876543

>PRK07577 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.9e-37  Score=255.08  Aligned_cols=232  Identities=30%  Similarity=0.358  Sum_probs=200.7

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      +++|+++||||+++||++++++|+++|++|++++|+.+..         .  ...++.+|+++.++++++++++.+.+  
T Consensus         1 ~~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~---------~--~~~~~~~D~~~~~~~~~~~~~~~~~~--   67 (234)
T PRK07577          1 MSSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD---------F--PGELFACDLADIEQTAATLAQINEIH--   67 (234)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc---------c--CceEEEeeCCCHHHHHHHHHHHHHhC--
Confidence            3679999999999999999999999999999999987641         1  12467899999999999999988775  


Q ss_pred             cccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHH
Q 024230           98 KLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAM  177 (270)
Q Consensus        98 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal  177 (270)
                      ++|++|||+|.....++.+.+.+++++.+++|+.+++.+.++++|.|++++.++||++||... .+.+....|++||+++
T Consensus        68 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~-~~~~~~~~Y~~sK~a~  146 (234)
T PRK07577         68 PVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAI-FGALDRTSYSAAKSAL  146 (234)
T ss_pred             CCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccc-cCCCCchHHHHHHHHH
Confidence            589999999998878888889999999999999999999999999999887889999999854 4667788999999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC-hhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEE
Q 024230          178 NQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN-GKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTV  256 (270)
Q Consensus       178 ~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i  256 (270)
                      ++++++++.|+.+.||++++|+||+++|++....... +..........+.++...|+|+++.+.+++++...+++|+.+
T Consensus       147 ~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~  226 (234)
T PRK07577        147 VGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPMRRLGTPEEVAAAIAFLLSDDAGFITGQVL  226 (234)
T ss_pred             HHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCCCCCcCHHHHHHHHHHHhCcccCCccceEE
Confidence            9999999999999999999999999999986543221 222223344567777889999999999999988889999999


Q ss_pred             eecCCcc
Q 024230          257 CIDGGFT  263 (270)
Q Consensus       257 ~vdgG~~  263 (270)
                      .+|||.+
T Consensus       227 ~~~g~~~  233 (234)
T PRK07577        227 GVDGGGS  233 (234)
T ss_pred             EecCCcc
Confidence            9999975

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=100.00  E-value=1.5e-38  Score=253.14  Aligned_cols=235  Identities=26%  Similarity=0.340  Sum_probs=199.3

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK--GLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      |+++||++++||+.||||++++++|+++|..+.++..+.|..+... ++++.  ...+.|++||+++..++++.++++..
T Consensus         1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~a-kL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~   79 (261)
T KOG4169|consen    1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIA-KLQAINPSVSVIFIKCDVTNRGDLEAAFDKILA   79 (261)
T ss_pred             CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHH-HHhccCCCceEEEEEeccccHHHHHHHHHHHHH
Confidence            5789999999999999999999999999998777777777654443 34443  46799999999999999999999999


Q ss_pred             HcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC---CcEEEEecCccccccCCCChhh
Q 024230           94 LFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG---AASIVLMSSALGIVSANVGTVY  170 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~---~g~ii~iss~~~~~~~~~~~~y  170 (270)
                      +| +.+|++||+||+.        +..+|++++.+|+.|.++-+...+|+|.+++   +|-|||+||..|..|.|..+.|
T Consensus        80 ~f-g~iDIlINgAGi~--------~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY  150 (261)
T KOG4169|consen   80 TF-GTIDILINGAGIL--------DDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVY  150 (261)
T ss_pred             Hh-CceEEEEcccccc--------cchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhh
Confidence            99 8999999999995        4566999999999999999999999998875   5679999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHH--ccCCceEEEEecCcccCCCCccccC---ChhhHHHHhhcCCCCCCCChHhHHHHHHHHhC
Q 024230          171 SATKGAMNQLAKNLACEW--AKDNIRTNSVAPWYIRTPFTEPLLG---NGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCM  245 (270)
Q Consensus       171 ~~sKaal~~~~~sla~el--~~~~i~v~~v~pG~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (270)
                      ++||+++.+|+||+|.+.  .+.||+++.+|||+++|.+...+..   ..+..+++.+.......++|.++++.++-...
T Consensus       151 ~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~~~~q~~~~~a~~~v~aiE  230 (261)
T KOG4169|consen  151 AASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALERAPKQSPACCAINIVNAIE  230 (261)
T ss_pred             hhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHHcccCCHHHHHHHHHHHHh
Confidence            999999999999998765  4679999999999999998777632   22333333333333346789999999998885


Q ss_pred             CCCCCccCcEEeecCCcc
Q 024230          246 PAASYITGQTVCIDGGFT  263 (270)
Q Consensus       246 ~~~~~~~G~~i~vdgG~~  263 (270)
                      .   ..||+++.+|.|..
T Consensus       231 ~---~~NGaiw~v~~g~l  245 (261)
T KOG4169|consen  231 Y---PKNGAIWKVDSGSL  245 (261)
T ss_pred             h---ccCCcEEEEecCcE
Confidence            4   58999999999873

>PLN00015 protochlorophyllide reductase

Probab=100.00  E-value=5.8e-37  Score=266.75  Aligned_cols=237  Identities=18%  Similarity=0.176  Sum_probs=196.8

Q ss_pred             EEecCCCcHHHHHHHHHHHCC-CeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcccEE
Q 024230           24 LVTGGTKGLGLAVVEELSMLG-ATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIF  102 (270)
Q Consensus        24 lItG~s~giG~~la~~l~~~G-~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~l  102 (270)
                      |||||++|||.++|++|+++| ++|++++|+++..++..+++...+.++.++.+|+++.++++++++++.+.+ +++|++
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~-~~iD~l   79 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSG-RPLDVL   79 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcC-CCCCEE
Confidence            699999999999999999999 999999999988877777775445678889999999999999999998776 799999


Q ss_pred             EECCCCCCC-CCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CcEEEEecCcccccc----------------
Q 024230          103 VNNVGTSVL-KPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG--AASIVLMSSALGIVS----------------  163 (270)
Q Consensus       103 i~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~--~g~ii~iss~~~~~~----------------  163 (270)
                      |||||+... .++.+.+.++|++++++|+.+++.+++.++|.|.+++  .|+||++||..+..+                
T Consensus        80 InnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~  159 (308)
T PLN00015         80 VCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLR  159 (308)
T ss_pred             EECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhh
Confidence            999998543 3566789999999999999999999999999998775  589999999876431                


Q ss_pred             -------------------CCCChhhhhhHHHHHHHHHHHHHHHcc-CCceEEEEecCcc-cCCCCccccCChhhHHHHh
Q 024230          164 -------------------ANVGTVYSATKGAMNQLAKNLACEWAK-DNIRTNSVAPWYI-RTPFTEPLLGNGKFVDEVK  222 (270)
Q Consensus       164 -------------------~~~~~~y~~sKaal~~~~~sla~el~~-~~i~v~~v~pG~v-~t~~~~~~~~~~~~~~~~~  222 (270)
                                         .++...|++||+|+..+++.+++++.+ .||+|++|+||++ .|+|.+.............
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~~~  239 (308)
T PLN00015        160 GLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFPPF  239 (308)
T ss_pred             hhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHHHHHHHH
Confidence                               023467999999999999999999975 6999999999999 7888765322111111111


Q ss_pred             hcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEEeecCC
Q 024230          223 SRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGG  261 (270)
Q Consensus       223 ~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG  261 (270)
                      ...+.++..+|++.++.+++++++.....+|+.+..||+
T Consensus       240 ~~~~~~~~~~pe~~a~~~~~l~~~~~~~~~G~~~~~~g~  278 (308)
T PLN00015        240 QKYITKGYVSEEEAGKRLAQVVSDPSLTKSGVYWSWNGG  278 (308)
T ss_pred             HHHHhcccccHHHhhhhhhhhccccccCCCccccccCCc
Confidence            233455678999999999999998777899999998876

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.2e-36  Score=277.87  Aligned_cols=241  Identities=25%  Similarity=0.325  Sum_probs=206.7

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh--hHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTE--TELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .++||+++|||+++|||.++|++|+++|++|+++++..  +.+++..+++   +  ..++.+|++++++++++++.+.+.
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~---~--~~~~~~Dv~~~~~~~~~~~~~~~~  281 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRV---G--GTALALDITAPDAPARIAEHLAER  281 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc---C--CeEEEEeCCCHHHHHHHHHHHHHh
Confidence            56899999999999999999999999999999998853  2333333222   2  346789999999999999999888


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                      + +++|++|||||......+.+.+.++|+.++++|+.+++++.+++.+.+..++.++||++||..+..+.+++..|+++|
T Consensus       282 ~-g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~~~Y~asK  360 (450)
T PRK08261        282 H-GGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYAASK  360 (450)
T ss_pred             C-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCChHHHHHH
Confidence            7 799999999999888888899999999999999999999999999976656678999999999998889999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCc
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ  254 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  254 (270)
                      +++++|+++++.|+.+.||+++.|+||+++|+|...+...  ..+......++.+...|+|+++++.||+++.+.++||+
T Consensus       361 aal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~~--~~~~~~~~~~l~~~~~p~dva~~~~~l~s~~~~~itG~  438 (450)
T PRK08261        361 AGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPFA--TREAGRRMNSLQQGGLPVDVAETIAWLASPASGGVTGN  438 (450)
T ss_pred             HHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccchh--HHHHHhhcCCcCCCCCHHHHHHHHHHHhChhhcCCCCC
Confidence            9999999999999999999999999999999887654211  11112223456677899999999999999999999999


Q ss_pred             EEeecCCcccc
Q 024230          255 TVCIDGGFTVN  265 (270)
Q Consensus       255 ~i~vdgG~~~~  265 (270)
                      ++.+|||..+.
T Consensus       439 ~i~v~g~~~~~  449 (450)
T PRK08261        439 VVRVCGQSLLG  449 (450)
T ss_pred             EEEECCCcccC
Confidence            99999998764

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=100.00  E-value=4.7e-36  Score=252.47  Aligned_cols=240  Identities=31%  Similarity=0.373  Sum_probs=207.7

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEE-eeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHT-CSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l-~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      |+++||||+++||.+++++|+++|++|++ +.|+++..++...++...+.++..+.+|++|+++++++++++.+.+ +++
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~-~~i   80 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHD-EPL   80 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhC-CCC
Confidence            68999999999999999999999999876 4677777777777777767788999999999999999999998887 799


Q ss_pred             cEEEECCCCC-CCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC---CcEEEEecCccccccCCCC-hhhhhhH
Q 024230          100 NIFVNNVGTS-VLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG---AASIVLMSSALGIVSANVG-TVYSATK  174 (270)
Q Consensus       100 d~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~---~g~ii~iss~~~~~~~~~~-~~y~~sK  174 (270)
                      |++|||+|.. ...++.+.+.++++..+++|+.+++.+++.+++.|.++.   .|+||++||..+..+.++. ..|+++|
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~~~Y~~sK  160 (247)
T PRK09730         81 AALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASK  160 (247)
T ss_pred             CEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCcccchHhHH
Confidence            9999999985 445667889999999999999999999999999997653   5789999999888887763 6799999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCc
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ  254 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  254 (270)
                      +++++++++++.|+.+.||+++.++||+++|++..... .+..........|.++..+++|+++.+.|++++...+++|+
T Consensus       161 ~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~  239 (247)
T PRK09730        161 GAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGG-EPGRVDRVKSNIPMQRGGQPEEVAQAIVWLLSDKASYVTGS  239 (247)
T ss_pred             HHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCC-CHHHHHHHHhcCCCCCCcCHHHHHHHHHhhcChhhcCccCc
Confidence            99999999999999999999999999999999754321 22333344455677778899999999999999888899999


Q ss_pred             EEeecCCc
Q 024230          255 TVCIDGGF  262 (270)
Q Consensus       255 ~i~vdgG~  262 (270)
                      ++.+|||.
T Consensus       240 ~~~~~g~~  247 (247)
T PRK09730        240 FIDLAGGK  247 (247)
T ss_pred             EEecCCCC
Confidence            99999984

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-36  Score=258.60  Aligned_cols=216  Identities=23%  Similarity=0.301  Sum_probs=194.3

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      |++++|+++||||++|||++++++|+++|++|++++|+++.+++..+++.    ++.++.+|++|+++++++++++.+.+
T Consensus         1 ~~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~   76 (273)
T PRK07825          1 DDLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG----LVVGGPLDVTDPASFAAFLDAVEADL   76 (273)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc----cceEEEccCCCHHHHHHHHHHHHHHc
Confidence            46789999999999999999999999999999999999988877666553    57788999999999999999999988


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKG  175 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKa  175 (270)
                       +++|++|||||.....++.+.+.+++++++++|+.+++.+++.++|+|.+++.|+||++||..+..+.++...|++||+
T Consensus        77 -~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  155 (273)
T PRK07825         77 -GPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKH  155 (273)
T ss_pred             -CCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCCcchHHHHH
Confidence             7999999999998888888999999999999999999999999999999988899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCC
Q 024230          176 AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA  247 (270)
Q Consensus       176 al~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (270)
                      ++++|+++++.|+.+.||+++.|+||+++|++.......           ......+++|+++.+++++.+.
T Consensus       156 a~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~~~~-----------~~~~~~~~~~va~~~~~~l~~~  216 (273)
T PRK07825        156 AVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGTGGA-----------KGFKNVEPEDVAAAIVGTVAKP  216 (273)
T ss_pred             HHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhcccccc-----------cCCCCCCHHHHHHHHHHHHhCC
Confidence            999999999999999999999999999999986543110           1123568999999999999754

>PRK06182 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.7e-36  Score=259.39  Aligned_cols=222  Identities=25%  Similarity=0.330  Sum_probs=192.5

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      +++|+++|||+++|||++++++|+++|++|++++|+++.+++..    .  ..+.++.+|++|+++++++++++.+.+ +
T Consensus         1 ~~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~----~--~~~~~~~~Dv~~~~~~~~~~~~~~~~~-~   73 (273)
T PRK06182          1 MQKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA----S--LGVHPLSLDVTDEASIKAAVDTIIAEE-G   73 (273)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----h--CCCeEEEeeCCCHHHHHHHHHHHHHhc-C
Confidence            36899999999999999999999999999999999987765432    2  237788999999999999999998887 7


Q ss_pred             cccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHH
Q 024230           98 KLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAM  177 (270)
Q Consensus        98 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal  177 (270)
                      ++|++|||||....+++.+.+.+++++.+++|+.+++.+++.++|.|++++.|+||++||..+..+.+....|++||+++
T Consensus        74 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~  153 (273)
T PRK06182         74 RIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFAL  153 (273)
T ss_pred             CCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCccHhHHHHHHH
Confidence            99999999999888888999999999999999999999999999999988888999999998888888888999999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEecCcccCCCCccccC-------Chh-------hHHHHhhcCCCCCCCChHhHHHHHHHH
Q 024230          178 NQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG-------NGK-------FVDEVKSRTPMGRLGEPKEVSSLVAFL  243 (270)
Q Consensus       178 ~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~-------~~~-------~~~~~~~~~~~~~~~~~~dva~~~~~l  243 (270)
                      ++|+++++.|+.+.||+++.|+||+++|++......       ...       ..+.+....+.++..+|+|+|+.++++
T Consensus       154 ~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~  233 (273)
T PRK06182        154 EGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPSVIADAISKA  233 (273)
T ss_pred             HHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHHHHHHHHHHH
Confidence            999999999999999999999999999997532110       000       112333444667888999999999999


Q ss_pred             hCC
Q 024230          244 CMP  246 (270)
Q Consensus       244 ~s~  246 (270)
                      ++.
T Consensus       234 ~~~  236 (273)
T PRK06182        234 VTA  236 (273)
T ss_pred             HhC
Confidence            975

>PRK07832 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-36  Score=259.19  Aligned_cols=243  Identities=19%  Similarity=0.249  Sum_probs=208.8

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCe-EEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLK-VTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      |+++||||++|||++++++|+++|++|++++|+++.+++..+++...+.+ +.++.+|++++++++++++++.+.+ +++
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i   79 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAH-GSM   79 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhc-CCC
Confidence            58999999999999999999999999999999998888887777765544 4567899999999999999998888 799


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEecCccccccCCCChhhhhhHHHHH
Q 024230          100 NIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRAS-GAASIVLMSSALGIVSANVGTVYSATKGAMN  178 (270)
Q Consensus       100 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~ii~iss~~~~~~~~~~~~y~~sKaal~  178 (270)
                      |++|||+|.....++.+.+.+++++.+++|+.+++.++++++|+|.++ ..++||++||..+..+.+....|+++|++++
T Consensus        80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~  159 (272)
T PRK07832         80 DVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLR  159 (272)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcchHHHHHHHH
Confidence            999999998877788899999999999999999999999999999764 3589999999998888888999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEecCcccCCCCccccC-----ChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccC
Q 024230          179 QLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG-----NGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG  253 (270)
Q Consensus       179 ~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  253 (270)
                      +|+++++.|+.+.||+|+.|+||+++|++......     ........... ..++..+|+|+|+.+++++. ..+++++
T Consensus       160 ~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~vA~~~~~~~~-~~~~~~~  237 (272)
T PRK07832        160 GLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDR-FRGHAVTPEKAAEKILAGVE-KNRYLVY  237 (272)
T ss_pred             HHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHh-cccCCCCHHHHHHHHHHHHh-cCCeEEe
Confidence            99999999999999999999999999998765321     11111111111 23567899999999999995 5789999


Q ss_pred             cEEeecCCccccc
Q 024230          254 QTVCIDGGFTVNG  266 (270)
Q Consensus       254 ~~i~vdgG~~~~~  266 (270)
                      +.+.+++|+.+.+
T Consensus       238 ~~~~~~~~~~~~~  250 (272)
T PRK07832        238 TSPDIRALYWFKR  250 (272)
T ss_pred             cCcchHHHHHHHh
Confidence            9999999977654

>PRK08263 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-36  Score=259.20  Aligned_cols=239  Identities=23%  Similarity=0.273  Sum_probs=201.8

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      .+|+|+||||+++||++++++|+++|++|++++|+++.+++..+.+   +.++.++.+|++|+++++++++.+.+.+ ++
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~   77 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY---GDRLLPLALDVTDRAAVFAAVETAVEHF-GR   77 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc---cCCeeEEEccCCCHHHHHHHHHHHHHHc-CC
Confidence            5789999999999999999999999999999999988776654433   4568889999999999999999998888 79


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHHH
Q 024230           99 LNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMN  178 (270)
Q Consensus        99 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal~  178 (270)
                      +|++|||||....+++.+.+.+++++.+++|+.+++.++++++|.|++++.+++|++||..+..+.+....|+++|++++
T Consensus        78 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~  157 (275)
T PRK08263         78 LDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALE  157 (275)
T ss_pred             CCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCccHHHHHHHHHH
Confidence            99999999998888889999999999999999999999999999998887789999999999999999999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEecCcccCCCCccccCC-------hhhHHHHhhcCCCCCC-CChHhHHHHHHHHhCCCCCC
Q 024230          179 QLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN-------GKFVDEVKSRTPMGRL-GEPKEVSSLVAFLCMPAASY  250 (270)
Q Consensus       179 ~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~-~~~~dva~~~~~l~s~~~~~  250 (270)
                      +++++++.|+.+.||+|+.++||+++|++.......       ......+....+..+. .+|+|+++.++++++..  .
T Consensus       158 ~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~l~~~~--~  235 (275)
T PRK08263        158 GMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGDPEAAAEALLKLVDAE--N  235 (275)
T ss_pred             HHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCCHHHHHHHHHHHHcCC--C
Confidence            999999999999999999999999999987422111       1111223233344556 89999999999999753  2


Q ss_pred             ccCcEEeecCCcc
Q 024230          251 ITGQTVCIDGGFT  263 (270)
Q Consensus       251 ~~G~~i~vdgG~~  263 (270)
                      ..++.+...++..
T Consensus       236 ~~~~~~~~~~~~~  248 (275)
T PRK08263        236 PPLRLFLGSGVLD  248 (275)
T ss_pred             CCeEEEeCchHHH
Confidence            3556655544433

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.1e-35  Score=249.91  Aligned_cols=245  Identities=32%  Similarity=0.498  Sum_probs=212.5

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChh-HHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTET-ELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      ++++|++|||||+|+||++++++|+++|++|+++.|+.. ..+...+.+...+.++.++.+|++++++++++++++.+.+
T Consensus         3 ~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (249)
T PRK12825          3 SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERF   82 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHc
Confidence            456789999999999999999999999999877666544 4455566666666778999999999999999999998887


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKG  175 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKa  175 (270)
                       +++|++||++|.....++.+.+.+++++.+++|+.+++++++.+.+++++.+.+++|++||..+..+.+....|+.+|+
T Consensus        83 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~~~~y~~sK~  161 (249)
T PRK12825         83 -GRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKA  161 (249)
T ss_pred             -CCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCCchHHHHHHH
Confidence             7999999999988777788889999999999999999999999999998887889999999999988888899999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcE
Q 024230          176 AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT  255 (270)
Q Consensus       176 al~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  255 (270)
                      +++++++.++.++.+.|++++.++||++.+++....... ..... ....+.++..+++|+++.+.+++++.....+|++
T Consensus       162 ~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~  239 (249)
T PRK12825        162 GLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEE-AREAK-DAETPLGRSGTPEDIARAVAFLCSDASDYITGQV  239 (249)
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccch-hHHhh-hccCCCCCCcCHHHHHHHHHHHhCccccCcCCCE
Confidence            999999999999999999999999999999987654321 11111 1245677788999999999999988888999999


Q ss_pred             EeecCCccc
Q 024230          256 VCIDGGFTV  264 (270)
Q Consensus       256 i~vdgG~~~  264 (270)
                      +.++||..+
T Consensus       240 ~~i~~g~~~  248 (249)
T PRK12825        240 IEVTGGVDV  248 (249)
T ss_pred             EEeCCCEee
Confidence            999999764

>PRK05866 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.3e-36  Score=258.94  Aligned_cols=222  Identities=22%  Similarity=0.328  Sum_probs=193.4

Q ss_pred             cccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           13 QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        13 ~~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      .+.+.+++|+++||||++|||+++|++|+++|++|++++|+.+.++++.+++...+.++.++.+|++|.+++.++++++.
T Consensus        33 ~~~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~  112 (293)
T PRK05866         33 RQPVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVE  112 (293)
T ss_pred             CCCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            44678899999999999999999999999999999999999998888888887767788899999999999999999999


Q ss_pred             HHcCCcccEEEECCCCCCCCCCCCC--CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccc-cCCCChh
Q 024230           93 SLFNGKLNIFVNNVGTSVLKPTLEY--NAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIV-SANVGTV  169 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~-~~~~~~~  169 (270)
                      +.+ +++|++|||||.....++.+.  ++++++.++++|+.+++.++++++|+|.+.+.|+||++||.++.. +.++...
T Consensus       113 ~~~-g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~p~~~~  191 (293)
T PRK05866        113 KRI-GGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFSV  191 (293)
T ss_pred             HHc-CCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCCcch
Confidence            888 799999999998766666543  568899999999999999999999999988889999999987654 3577789


Q ss_pred             hhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCC
Q 024230          170 YSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP  246 (270)
Q Consensus       170 y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (270)
                      |++||+|+++|+++++.|+.++||+|++++||+++|++.......          .. ....+|+++|+.++..+..
T Consensus       192 Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~~~----------~~-~~~~~pe~vA~~~~~~~~~  257 (293)
T PRK05866        192 YNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTKAY----------DG-LPALTADEAAEWMVTAART  257 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccccccc----------cC-CCCCCHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999999999987532110          01 1246899999999888854

>PRK12828 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.5e-36  Score=249.79  Aligned_cols=237  Identities=26%  Similarity=0.389  Sum_probs=207.7

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      ++.+++|+++|||++|+||++++++|+++|++|++++|++++..+..+++...  .+..+.+|++|.++++++++++.+.
T Consensus         2 ~~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~   79 (239)
T PRK12828          2 EHSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPAD--ALRIGGIDLVDPQAARRAVDEVNRQ   79 (239)
T ss_pred             CCCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhc--CceEEEeecCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999988776666655443  3556779999999999999999998


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                      + +++|++||++|.....++.+.+.+++++.+++|+.+++.+++++.|+|.+++.+++|++||..++.+.+....|+++|
T Consensus        80 ~-~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk  158 (239)
T PRK12828         80 F-GRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAK  158 (239)
T ss_pred             h-CCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCCcchhHHHH
Confidence            8 799999999998776777788999999999999999999999999999888788999999999998888889999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCc
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ  254 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  254 (270)
                      ++++.++++++.++.+.|++++.+.||++.+++.......          .......+++|+++++.+++++...+++|+
T Consensus       159 ~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~~~----------~~~~~~~~~~dva~~~~~~l~~~~~~~~g~  228 (239)
T PRK12828        159 AGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADMPD----------ADFSRWVTPEQIAAVIAFLLSDEAQAITGA  228 (239)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcCCc----------hhhhcCCCHHHHHHHHHHHhCcccccccce
Confidence            9999999999999998999999999999999854332111          112335789999999999999877789999


Q ss_pred             EEeecCCccc
Q 024230          255 TVCIDGGFTV  264 (270)
Q Consensus       255 ~i~vdgG~~~  264 (270)
                      .+.+|||.+.
T Consensus       229 ~~~~~g~~~~  238 (239)
T PRK12828        229 SIPVDGGVAL  238 (239)
T ss_pred             EEEecCCEeC
Confidence            9999999764

>PRK12829 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.1e-36  Score=253.55  Aligned_cols=247  Identities=33%  Similarity=0.512  Sum_probs=212.1

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      +...+++|+++||||+|+||++++++|+++|++|++++|+++..+++.+.....  ++.++.+|++|+++++++++++.+
T Consensus         5 ~~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~   82 (264)
T PRK12829          5 LLKPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGA--KVTATVADVADPAQVERVFDTAVE   82 (264)
T ss_pred             HhhccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcC--ceEEEEccCCCHHHHHHHHHHHHH
Confidence            345689999999999999999999999999999999999988777666555432  678899999999999999999998


Q ss_pred             HcCCcccEEEECCCCC-CCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-cEEEEecCccccccCCCChhhh
Q 024230           94 LFNGKLNIFVNNVGTS-VLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGA-ASIVLMSSALGIVSANVGTVYS  171 (270)
Q Consensus        94 ~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~-g~ii~iss~~~~~~~~~~~~y~  171 (270)
                      .+ +++|++||++|.. ...+....+.+++++++++|+.+++.+++++.+.|.+.+. +.|+++||..+..+.+.+..|+
T Consensus        83 ~~-~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~~~y~  161 (264)
T PRK12829         83 RF-GGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYA  161 (264)
T ss_pred             Hh-CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCCchhH
Confidence            88 7999999999987 5666778899999999999999999999999999887665 7899999988888888888999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC---------hhhHHHHhhcCCCCCCCChHhHHHHHHH
Q 024230          172 ATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN---------GKFVDEVKSRTPMGRLGEPKEVSSLVAF  242 (270)
Q Consensus       172 ~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~dva~~~~~  242 (270)
                      .+|++++.++++++.++...+++++.+.||+++|++.......         ...........+.+++.+++|+++++.+
T Consensus       162 ~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~  241 (264)
T PRK12829        162 ASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAATALF  241 (264)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            9999999999999999998899999999999999876443210         1112223334566778999999999999


Q ss_pred             HhCCCCCCccCcEEeecCCcc
Q 024230          243 LCMPAASYITGQTVCIDGGFT  263 (270)
Q Consensus       243 l~s~~~~~~~G~~i~vdgG~~  263 (270)
                      ++++....++|+.+.+|||..
T Consensus       242 l~~~~~~~~~g~~~~i~~g~~  262 (264)
T PRK12829        242 LASPAARYITGQAISVDGNVE  262 (264)
T ss_pred             HcCccccCccCcEEEeCCCcc
Confidence            998777889999999999975

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=100.00  E-value=1.3e-35  Score=250.87  Aligned_cols=244  Identities=32%  Similarity=0.480  Sum_probs=212.0

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      +|++||||++++||++++++|+++|++|++++|+++..+.+.+++...+.++.++.+|+++.++++++++++.+.+ +++
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~   79 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEF-GGL   79 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhc-CCC
Confidence            5799999999999999999999999999999999988888887777666789999999999999999999999888 789


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHHHH
Q 024230          100 NIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQ  179 (270)
Q Consensus       100 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal~~  179 (270)
                      |++||++|.....+..+.+++++++++++|+.+++.+++++.|.|++.+.+++|++||..+..+.+.+..|+.+|++++.
T Consensus        80 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~sk~a~~~  159 (255)
T TIGR01963        80 DILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIG  159 (255)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCCchhHHHHHHHHH
Confidence            99999999877777778899999999999999999999999999988878899999999988888889999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEecCcccCCCCccccCC---------hhhH-HHHhhcCCCCCCCChHhHHHHHHHHhCCCCC
Q 024230          180 LAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN---------GKFV-DEVKSRTPMGRLGEPKEVSSLVAFLCMPAAS  249 (270)
Q Consensus       180 ~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~---------~~~~-~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  249 (270)
                      ++++++.++.+.+++++.++||++.+++.......         .... ..+....+.+.+.+++|+++++++++++...
T Consensus       160 ~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~  239 (255)
T TIGR01963       160 LTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAETALFLASDAAA  239 (255)
T ss_pred             HHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHHHHHHHcCcccc
Confidence            99999999998999999999999999864321110         0011 1122233556688999999999999987667


Q ss_pred             CccCcEEeecCCccc
Q 024230          250 YITGQTVCIDGGFTV  264 (270)
Q Consensus       250 ~~~G~~i~vdgG~~~  264 (270)
                      .++|+++.+|||++.
T Consensus       240 ~~~g~~~~~~~g~~~  254 (255)
T TIGR01963       240 GITGQAIVLDGGWTA  254 (255)
T ss_pred             CccceEEEEcCcccc
Confidence            789999999999874

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK05650 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.5e-36  Score=255.04  Aligned_cols=225  Identities=20%  Similarity=0.271  Sum_probs=199.0

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      |+++||||+|+||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++++++++++++++...+ +++|
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~-~~id   79 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKW-GGID   79 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence            589999999999999999999999999999999999888888888777789999999999999999999998888 7999


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHHHHH
Q 024230          101 IFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQL  180 (270)
Q Consensus       101 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal~~~  180 (270)
                      ++|||+|....+++.+.+.+++++++++|+.+++.+++.++|+|.+++.++||++||..+..+.++...|+++|+++++|
T Consensus        80 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~  159 (270)
T PRK05650         80 VIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVAL  159 (270)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCchHHHHHHHHHHHH
Confidence            99999999888888899999999999999999999999999999888778999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCC
Q 024230          181 AKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP  246 (270)
Q Consensus       181 ~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (270)
                      +++++.|+.+.||+++.|+||+++|++........................+++|+|+.++..+..
T Consensus       160 ~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~l~~  225 (270)
T PRK05650        160 SETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLLEKSPITAADIADYIYQQVAK  225 (270)
T ss_pred             HHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHHHhhcCCCCHHHHHHHHHHHHhC
Confidence            999999999999999999999999998776543322222221112223457899999999998864

>PRK07454 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-35  Score=249.77  Aligned_cols=229  Identities=23%  Similarity=0.295  Sum_probs=201.5

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      ++|+++|||++++||+.++++|+++|++|++++|+++..+++.+.+...+.++.++.+|+++++++.++++++.+.+ ++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~   83 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQF-GC   83 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHc-CC
Confidence            46899999999999999999999999999999999988888877777666789899999999999999999999888 79


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHHH
Q 024230           99 LNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMN  178 (270)
Q Consensus        99 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal~  178 (270)
                      +|++|||+|.....++.+.+.+++++++++|+.+++.+++.+.|+|.+++.++||++||..+..+.+++..|+++|++++
T Consensus        84 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~  163 (241)
T PRK07454         84 PDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAALA  163 (241)
T ss_pred             CCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCCccHHHHHHHHHH
Confidence            99999999988777788889999999999999999999999999998887899999999999988888999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEE
Q 024230          179 QLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTV  256 (270)
Q Consensus       179 ~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i  256 (270)
                      .++++++.|+.+.||+++.|.||+++|++......        .......+..+++|+++.+++++++....+.++.-
T Consensus       164 ~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~~--------~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~~~~~  233 (241)
T PRK07454        164 AFTKCLAEEERSHGIRVCTITLGAVNTPLWDTETV--------QADFDRSAMLSPEQVAQTILHLAQLPPSAVIEDLT  233 (241)
T ss_pred             HHHHHHHHHhhhhCCEEEEEecCcccCCccccccc--------ccccccccCCCHHHHHHHHHHHHcCCccceeeeEE
Confidence            99999999999999999999999999998543110        01111235678999999999999976665555543

>PRK07041 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.1e-36  Score=248.75  Aligned_cols=227  Identities=26%  Similarity=0.441  Sum_probs=194.5

Q ss_pred             EEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcccEEE
Q 024230           24 LVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFV  103 (270)
Q Consensus        24 lItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~li  103 (270)
                      +|||++++||++++++|+++|++|++++|+++..+...++++ .+.++.++.+|++++++++++++++     +++|++|
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~id~li   74 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALG-GGAPVRTAALDITDEAAVDAFFAEA-----GPFDHVV   74 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHhc-----CCCCEEE
Confidence            699999999999999999999999999999888777666664 2567888999999999998888763     7899999


Q ss_pred             ECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHHHHHHHH
Q 024230          104 NNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKN  183 (270)
Q Consensus       104 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal~~~~~s  183 (270)
                      ||+|.....++.+.+.+++++++++|+.+++.+++  .+.|.  +.++||++||..++.+.+....|++||+++++++++
T Consensus        75 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~--~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~  150 (230)
T PRK07041         75 ITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVAR--AARIA--PGGSLTFVSGFAAVRPSASGVLQGAINAALEALARG  150 (230)
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhc--CCeEEEEECchhhcCCCCcchHHHHHHHHHHHHHHH
Confidence            99999877788889999999999999999999999  44553  458999999999999989999999999999999999


Q ss_pred             HHHHHccCCceEEEEecCcccCCCCccccCC--hhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEEeecCC
Q 024230          184 LACEWAKDNIRTNSVAPWYIRTPFTEPLLGN--GKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGG  261 (270)
Q Consensus       184 la~el~~~~i~v~~v~pG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG  261 (270)
                      ++.|+.+  |+++.++||+++|++.......  ...........+.++...|+|+++++.+|+++  .+++|+++.+|||
T Consensus       151 la~e~~~--irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~--~~~~G~~~~v~gg  226 (230)
T PRK07041        151 LALELAP--VRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLAAN--GFTTGSTVLVDGG  226 (230)
T ss_pred             HHHHhhC--ceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcC--CCcCCcEEEeCCC
Confidence            9999975  9999999999999986543221  12223344556777888999999999999974  6799999999999


Q ss_pred             ccc
Q 024230          262 FTV  264 (270)
Q Consensus       262 ~~~  264 (270)
                      ..+
T Consensus       227 ~~~  229 (230)
T PRK07041        227 HAI  229 (230)
T ss_pred             eec
Confidence            865

>PRK05855 short chain dehydrogenase; Validated

Probab=100.00  E-value=1e-35  Score=279.27  Aligned_cols=232  Identities=22%  Similarity=0.246  Sum_probs=202.7

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      ...+++++++||||++|||+++|++|+++|++|++++|+.+.++++.++++..+.++.++.+|++|+++++++++++.+.
T Consensus       310 ~~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  389 (582)
T PRK05855        310 RGPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAE  389 (582)
T ss_pred             cccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            35678899999999999999999999999999999999999988888888877778999999999999999999999888


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCccccccCCCChhhhhh
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                      + +++|++|||||....+++.+.+.+++++++++|+.++++++++++|+|.+++ .|+||++||.+++.+.++...|++|
T Consensus       390 ~-g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~s  468 (582)
T PRK05855        390 H-GVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATS  468 (582)
T ss_pred             c-CCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHHHHH
Confidence            8 7999999999998888888999999999999999999999999999998875 4899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChh---hHH---HHhhcCCCCCCCChHhHHHHHHHHhCCC
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGK---FVD---EVKSRTPMGRLGEPKEVSSLVAFLCMPA  247 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (270)
                      |+|+++|+++++.|+.++||+|++|+||+++|+|.........   ..+   ......+..+..+|+++++.+++.++..
T Consensus       469 Kaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~~~~~~  548 (582)
T PRK05855        469 KAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGYGPEKVAKAIVDAVKRN  548 (582)
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhccccCCCHHHHHHHHHHHHHcC
Confidence            9999999999999999999999999999999998765421110   000   1111122234568999999999999653

>PRK08324 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.6e-35  Score=280.65  Aligned_cols=250  Identities=27%  Similarity=0.345  Sum_probs=219.6

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      ..++||+++||||+|+||++++++|+++|++|++++|+.+.++...+++... .++.++.+|++++++++++++++.+.+
T Consensus       418 ~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~-~~v~~v~~Dvtd~~~v~~~~~~~~~~~  496 (681)
T PRK08324        418 KPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP-DRALGVACDVTDEAAVQAAFEEAALAF  496 (681)
T ss_pred             cCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc-CcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999999999999999999998887777766544 578899999999999999999998888


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-cEEEEecCccccccCCCChhhhhhH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGA-ASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~-g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                       +++|++|||||.....++.+.+.++|++.+++|+.+++.+++.+.+.|++++. |+||++||..+..+.++...|++||
T Consensus       497 -g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~~~Y~asK  575 (681)
T PRK08324        497 -GGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAK  575 (681)
T ss_pred             -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCcHHHHHHH
Confidence             79999999999988888899999999999999999999999999999988764 8999999999999989999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcc--cCCCCccccC----------ChhhHHHHhhcCCCCCCCChHhHHHHHHH
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYI--RTPFTEPLLG----------NGKFVDEVKSRTPMGRLGEPKEVSSLVAF  242 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v--~t~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~dva~~~~~  242 (270)
                      +++++++++++.|+.+.||+|+.|.||.+  .|++......          .....+......+.++...++|+++++++
T Consensus       576 aa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA~a~~~  655 (681)
T PRK08324        576 AAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVTPEDVAEAVVF  655 (681)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCCccCHHHHHHHHHH
Confidence            99999999999999999999999999999  7876533210          11111234556778888999999999999


Q ss_pred             HhCCCCCCccCcEEeecCCcccccc
Q 024230          243 LCMPAASYITGQTVCIDGGFTVNGF  267 (270)
Q Consensus       243 l~s~~~~~~~G~~i~vdgG~~~~~~  267 (270)
                      ++++.....+|+++++|||.....+
T Consensus       656 l~s~~~~~~tG~~i~vdgG~~~~~~  680 (681)
T PRK08324        656 LASGLLSKTTGAIITVDGGNAAAFL  680 (681)
T ss_pred             HhCccccCCcCCEEEECCCchhccc
Confidence            9987788899999999999876543

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4e-35  Score=247.31  Aligned_cols=234  Identities=27%  Similarity=0.331  Sum_probs=204.5

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcC-CeEEEEEccCC--CHHHHHHHHHHHHH
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG-LKVTGSVCDVS--SRPQRQTLINTVSS   93 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~--~~~~~~~~~~~i~~   93 (270)
                      .+++|+++|||++++||.+++++|+++|++|++++|+.+..++..+++...+ .++.++.+|++  ++++++++++.+.+
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   88 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE   88 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence            5689999999999999999999999999999999999988888777776653 45666777775  78999999999998


Q ss_pred             HcCCcccEEEECCCCCC-CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhh
Q 024230           94 LFNGKLNIFVNNVGTSV-LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSA  172 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~  172 (270)
                      .+ +++|++|||||... ..++.+.+.+++++.+++|+.+++.+++++.|+|.+++.++||++||..+..+.+....|++
T Consensus        89 ~~-~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~  167 (247)
T PRK08945         89 QF-GRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAYAV  167 (247)
T ss_pred             Hh-CCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCCCcccHH
Confidence            88 79999999999853 45677888999999999999999999999999999888899999999999988889999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCcc
Q 024230          173 TKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT  252 (270)
Q Consensus       173 sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  252 (270)
                      ||++++++++.+++++...||+++.+.||+++|++........          ...++.+|+|+++.+.|++++..++++
T Consensus       168 sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (247)
T PRK08945        168 SKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFPGE----------DPQKLKTPEDIMPLYLYLMGDDSRRKN  237 (247)
T ss_pred             HHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhcCcc----------cccCCCCHHHHHHHHHHHhCccccccC
Confidence            9999999999999999999999999999999998754432111          123567999999999999999999999


Q ss_pred             CcEEeecCC
Q 024230          253 GQTVCIDGG  261 (270)
Q Consensus       253 G~~i~vdgG  261 (270)
                      |+++..--|
T Consensus       238 g~~~~~~~~  246 (247)
T PRK08945        238 GQSFDAQPG  246 (247)
T ss_pred             CeEEeCCCC
Confidence            999765443

>PRK07024 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-35  Score=249.41  Aligned_cols=214  Identities=24%  Similarity=0.281  Sum_probs=188.1

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      +|+++||||++|||.+++++|+++|++|++++|+.+.++++.+++...+ ++.++.+|++|++++.++++++.+.+ +++
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~i~~~~~~~~~~~-g~i   79 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAA-RVSVYAADVRDADALAAAAADFIAAH-GLP   79 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCC-eeEEEEcCCCCHHHHHHHHHHHHHhC-CCC
Confidence            5799999999999999999999999999999999988877777665433 78899999999999999999998888 789


Q ss_pred             cEEEECCCCCCCCCCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHHH
Q 024230          100 NIFVNNVGTSVLKPTL-EYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMN  178 (270)
Q Consensus       100 d~li~~ag~~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal~  178 (270)
                      |++|||+|........ +.+.+++++++++|+.+++.+++.++|.|.+++.++||++||..+..+.+....|++||++++
T Consensus        80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~  159 (257)
T PRK07024         80 DVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKAAAI  159 (257)
T ss_pred             CEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCCcchHHHHHHHH
Confidence            9999999986544333 378899999999999999999999999998888899999999999999999999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCC
Q 024230          179 QLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA  247 (270)
Q Consensus       179 ~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (270)
                      .|+++++.|+.++||+|++|+||+++|++.....            .+.....+|+++++.++......
T Consensus       160 ~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~------------~~~~~~~~~~~~a~~~~~~l~~~  216 (257)
T PRK07024        160 KYLESLRVELRPAGVRVVTIAPGYIRTPMTAHNP------------YPMPFLMDADRFAARAARAIARG  216 (257)
T ss_pred             HHHHHHHHHhhccCcEEEEEecCCCcCchhhcCC------------CCCCCccCHHHHHHHHHHHHhCC
Confidence            9999999999999999999999999998754321            11123468999999999988653

>PRK09135 pteridine reductase; Provisional

Probab=100.00  E-value=1.3e-34  Score=243.92  Aligned_cols=245  Identities=27%  Similarity=0.391  Sum_probs=205.9

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh-hHHHHHHHHHHhc-CCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTE-TELNECIHHLQMK-GLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~-~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      +.+++|+++|||++++||++++++|+++|++|++++|+. +..+...+.++.. +..+.++.+|+++++++.++++++.+
T Consensus         2 ~~~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   81 (249)
T PRK09135          2 MTDSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVA   81 (249)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            446789999999999999999999999999999999864 4455555555443 34688899999999999999999998


Q ss_pred             HcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhh
Q 024230           94 LFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                      .+ +++|++|||+|.....++.+.+.+++++++++|+.+++.+++++.|++.+. .+.++++++..+..+.++...|+.|
T Consensus        82 ~~-~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Y~~s  159 (249)
T PRK09135         82 AF-GRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ-RGAIVNITDIHAERPLKGYPVYCAA  159 (249)
T ss_pred             Hc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC-CeEEEEEeChhhcCCCCCchhHHHH
Confidence            88 799999999998777777788899999999999999999999999998765 4788888888887888888999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccC
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG  253 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  253 (270)
                      |++++.++++++.++.+ +++++.+.||++.+++..... ............+..+..+++|+++++.+++.+ ....+|
T Consensus       160 K~~~~~~~~~l~~~~~~-~i~~~~v~pg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~-~~~~~g  236 (249)
T PRK09135        160 KAALEMLTRSLALELAP-EVRVNAVAPGAILWPEDGNSF-DEEARQAILARTPLKRIGTPEDIAEAVRFLLAD-ASFITG  236 (249)
T ss_pred             HHHHHHHHHHHHHHHCC-CCeEEEEEeccccCccccccC-CHHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCc-cccccC
Confidence            99999999999999966 699999999999999864322 222233334455667778999999999999875 567899


Q ss_pred             cEEeecCCcccc
Q 024230          254 QTVCIDGGFTVN  265 (270)
Q Consensus       254 ~~i~vdgG~~~~  265 (270)
                      +++.+++|..+.
T Consensus       237 ~~~~i~~g~~~~  248 (249)
T PRK09135        237 QILAVDGGRSLT  248 (249)
T ss_pred             cEEEECCCeecc
Confidence            999999998653

>PRK06180 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5e-35  Score=250.94  Aligned_cols=225  Identities=19%  Similarity=0.219  Sum_probs=192.5

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      .+|+++||||+||||++++++|+++|++|++++|+++.++++.+.   .+.++..+.+|++|++++.++++++.+.+ ++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~d~~~~~~~~~~~~~~~-~~   78 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL---HPDRALARLLDVTDFDAIDAVVADAEATF-GP   78 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh---cCCCeeEEEccCCCHHHHHHHHHHHHHHh-CC
Confidence            578999999999999999999999999999999998876554332   24568889999999999999999998888 78


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHHH
Q 024230           99 LNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMN  178 (270)
Q Consensus        99 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal~  178 (270)
                      +|++|||||....+++.+.+.++|++++++|+.+++.++++++|+|++++.++||++||..+..+.++...|+++|++++
T Consensus        79 ~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~~~Y~~sK~a~~  158 (277)
T PRK06180         79 IDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALE  158 (277)
T ss_pred             CCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCcchhHHHHHHHH
Confidence            99999999998778888999999999999999999999999999999887889999999999999899999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEecCcccCCCCccccC-----ChhhHH------HHhhcCCCCCCCChHhHHHHHHHHhCCC
Q 024230          179 QLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG-----NGKFVD------EVKSRTPMGRLGEPKEVSSLVAFLCMPA  247 (270)
Q Consensus       179 ~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~-----~~~~~~------~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (270)
                      +++++++.|+.+.|++++.|+||+++|++......     .+.+..      ......+..++.+|+|+++++.+++...
T Consensus       159 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~  238 (277)
T PRK06180        159 GISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPAKAAQAILAAVESD  238 (277)
T ss_pred             HHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHcCC
Confidence            99999999999999999999999999987543211     111111      1111233456779999999999998754

>PRK09072 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.8e-35  Score=249.11  Aligned_cols=222  Identities=23%  Similarity=0.325  Sum_probs=195.3

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      |++++|+++||||+++||.+++++|+++|++|++++|+++.+++..+++ ..+.++.++.+|++|+++++++++.+.+ +
T Consensus         1 m~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~   78 (263)
T PRK09072          1 MDLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-PYPGRHRWVVADLTSEAGREAVLARARE-M   78 (263)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-hcCCceEEEEccCCCHHHHHHHHHHHHh-c
Confidence            5678999999999999999999999999999999999998888887777 4456888999999999999999999876 5


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKG  175 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKa  175 (270)
                       +++|++|||||.....++.+.+.+++++.+++|+.+++.+++.+.|+|.+++.+++|+++|..+..+.++...|+++|+
T Consensus        79 -~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  157 (263)
T PRK09072         79 -GGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKF  157 (263)
T ss_pred             -CCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCccHHHHHHH
Confidence             7999999999988777888899999999999999999999999999998887789999999999988889999999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCC
Q 024230          176 AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA  247 (270)
Q Consensus       176 al~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (270)
                      ++++++++++.|+.+.||+|+.++||+++|++......  .    ... ....+..+++|+++.+++++...
T Consensus       158 a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~--~----~~~-~~~~~~~~~~~va~~i~~~~~~~  222 (263)
T PRK09072        158 ALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQ--A----LNR-ALGNAMDDPEDVAAAVLQAIEKE  222 (263)
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhcc--c----ccc-cccCCCCCHHHHHHHHHHHHhCC
Confidence            99999999999999999999999999999987643211  0    000 11125678999999999999653

>PRK06194 hypothetical protein; Provisional

Probab=100.00  E-value=6.6e-35  Score=251.22  Aligned_cols=230  Identities=21%  Similarity=0.312  Sum_probs=195.7

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|.++++++++++.+.+
T Consensus         2 ~~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~   81 (287)
T PRK06194          2 KDFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERF   81 (287)
T ss_pred             cCCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            35788999999999999999999999999999999999888888888777666788899999999999999999999988


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC------cEEEEecCccccccCCCChh
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGA------ASIVLMSSALGIVSANVGTV  169 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~------g~ii~iss~~~~~~~~~~~~  169 (270)
                       +++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|+|.++..      |+||++||..++.+.+....
T Consensus        82 -g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  160 (287)
T PRK06194         82 -GAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGI  160 (287)
T ss_pred             -CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCcc
Confidence             79999999999988888888999999999999999999999999999987654      79999999999999889999


Q ss_pred             hhhhHHHHHHHHHHHHHHHcc--CCceEEEEecCcccCCCCccccCChh-------------hHHHHhhcCCCCCCCChH
Q 024230          170 YSATKGAMNQLAKNLACEWAK--DNIRTNSVAPWYIRTPFTEPLLGNGK-------------FVDEVKSRTPMGRLGEPK  234 (270)
Q Consensus       170 y~~sKaal~~~~~sla~el~~--~~i~v~~v~pG~v~t~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~  234 (270)
                      |++||++++.|+++++.|+..  .+|+++.++||+++|++.......+.             ...............+++
T Consensus       161 Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  240 (287)
T PRK06194        161 YNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSERNRPADLANTAPPTRSQLIAQAMSQKAVGSGKVTAE  240 (287)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccccccCchhcccCccccchhhHHHHHHHhhhhccCCCHH
Confidence            999999999999999999974  46999999999999998755421110             111111111111236899


Q ss_pred             hHHHHHHHHhCC
Q 024230          235 EVSSLVAFLCMP  246 (270)
Q Consensus       235 dva~~~~~l~s~  246 (270)
                      |+++.+..++..
T Consensus       241 dva~~i~~~~~~  252 (287)
T PRK06194        241 EVAQLVFDAIRA  252 (287)
T ss_pred             HHHHHHHHHHHc
Confidence            999999998754

>PRK05993 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-35  Score=252.69  Aligned_cols=223  Identities=21%  Similarity=0.255  Sum_probs=189.0

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      .+|+++||||++|||+++|++|+++|++|++++|+++.++++.+    .  .+.++.+|++|.++++++++++.+.+.++
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~----~--~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~   76 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA----E--GLEAFQLDYAEPESIAALVAQVLELSGGR   76 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----C--CceEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999999999999887654432    2  36778999999999999999997776568


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHHH
Q 024230           99 LNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMN  178 (270)
Q Consensus        99 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal~  178 (270)
                      +|++|||||....+++.+.+.+++++++++|+.+++.+++.++|+|.+++.|+||++||..+..+.+....|++||++++
T Consensus        77 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~  156 (277)
T PRK05993         77 LDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIE  156 (277)
T ss_pred             ccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCccchHHHHHHHHH
Confidence            99999999998888888999999999999999999999999999999888899999999999999899999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEecCcccCCCCccccCC-------------hhhHH---HHhh-cCCCCCCCChHhHHHHHH
Q 024230          179 QLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN-------------GKFVD---EVKS-RTPMGRLGEPKEVSSLVA  241 (270)
Q Consensus       179 ~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~-------------~~~~~---~~~~-~~~~~~~~~~~dva~~~~  241 (270)
                      +|+++++.|+.+.||+|+.|+||+++|++.......             ..+..   .+.. ........+|+++++.++
T Consensus       157 ~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i~  236 (277)
T PRK05993        157 GLSLTLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEGGGSKSRFKLGPEAVYAVLL  236 (277)
T ss_pred             HHHHHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHhhhhccccCCCHHHHHHHHH
Confidence            999999999999999999999999999987543210             00000   1111 112233568999999999


Q ss_pred             HHhCCC
Q 024230          242 FLCMPA  247 (270)
Q Consensus       242 ~l~s~~  247 (270)
                      ..+...
T Consensus       237 ~a~~~~  242 (277)
T PRK05993        237 HALTAP  242 (277)
T ss_pred             HHHcCC
Confidence            988654

>PLN02780 ketoreductase/ oxidoreductase

Probab=100.00  E-value=2.8e-35  Score=257.12  Aligned_cols=213  Identities=22%  Similarity=0.264  Sum_probs=179.2

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK--GLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      ..||+++||||++|||+++|++|+++|++|++++|+++.++++.++++..  +.++..+.+|+++  ++.+.++++.+.+
T Consensus        51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~  128 (320)
T PLN02780         51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETI  128 (320)
T ss_pred             ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHh
Confidence            46899999999999999999999999999999999999999988888754  3578888999985  2334444444444


Q ss_pred             C-CcccEEEECCCCCCC--CCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccc-c-CCCChhh
Q 024230           96 N-GKLNIFVNNVGTSVL--KPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIV-S-ANVGTVY  170 (270)
Q Consensus        96 ~-~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~-~-~~~~~~y  170 (270)
                      + .++|++|||||....  .++.+.+.+++++++++|+.+++.++++++|.|.+++.|+||++||..+.. + .|....|
T Consensus       129 ~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~~~~Y  208 (320)
T PLN02780        129 EGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVY  208 (320)
T ss_pred             cCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCccchHH
Confidence            2 257799999998643  467789999999999999999999999999999988889999999999864 3 5788999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhC
Q 024230          171 SATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCM  245 (270)
Q Consensus       171 ~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (270)
                      ++||+++++|+++++.|+.++||+|++|+||+++|+|....  ...           ....+|+++|+.++....
T Consensus       209 ~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~--~~~-----------~~~~~p~~~A~~~~~~~~  270 (320)
T PLN02780        209 AATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIR--RSS-----------FLVPSSDGYARAALRWVG  270 (320)
T ss_pred             HHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccccc--CCC-----------CCCCCHHHHHHHHHHHhC
Confidence            99999999999999999999999999999999999987521  000           014589999999988884

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=3.6e-35  Score=256.34  Aligned_cols=239  Identities=23%  Similarity=0.262  Sum_probs=191.9

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      ..+++||+++||||++|||+++|++|+++|++|++++|+++..++..+++.    ++.++.+|++|.++++++++++.+.
T Consensus        21 ~~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~----~v~~~~~Dl~d~~~v~~~~~~~~~~   96 (315)
T PRK06196         21 GHDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID----GVEVVMLDLADLESVRAFAERFLDS   96 (315)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh----hCeEEEccCCCHHHHHHHHHHHHhc
Confidence            457899999999999999999999999999999999999888777666653    3778899999999999999999888


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccc------------
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIV------------  162 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~------------  162 (270)
                      + +++|++|||||....  ..+.+.++|+..+++|+.+++.+++.++|.|.+.+.++||++||..+..            
T Consensus        97 ~-~~iD~li~nAg~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~  173 (315)
T PRK06196         97 G-RRIDILINNAGVMAC--PETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTR  173 (315)
T ss_pred             C-CCCCEEEECCCCCCC--CCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccC
Confidence            7 799999999997542  2356678899999999999999999999999887778999999976532            


Q ss_pred             cCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhH-HHHhh-cCCCC-CCCChHhHHHH
Q 024230          163 SANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFV-DEVKS-RTPMG-RLGEPKEVSSL  239 (270)
Q Consensus       163 ~~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~-~~~~~-~~~~~-~~~~~~dva~~  239 (270)
                      +.+....|+.||++++.+++.++.++.+.||+|++|+||+++|++........... ..+.. ..+.. +..+|+++|..
T Consensus       174 ~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  253 (315)
T PRK06196        174 GYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPIDPGFKTPAQGAAT  253 (315)
T ss_pred             CCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhhhhhcCCHhHHHHH
Confidence            22345689999999999999999999999999999999999999876543211110 01110 11222 46789999999


Q ss_pred             HHHHhCCCCCCccCcEEeecC
Q 024230          240 VAFLCMPAASYITGQTVCIDG  260 (270)
Q Consensus       240 ~~~l~s~~~~~~~G~~i~vdg  260 (270)
                      ++|+++......+|..+..|+
T Consensus       254 ~~~l~~~~~~~~~~g~~~~~~  274 (315)
T PRK06196        254 QVWAATSPQLAGMGGLYCEDC  274 (315)
T ss_pred             HHHHhcCCccCCCCCeEeCCC
Confidence            999997644334455555554

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=100.00  E-value=1.3e-34  Score=242.44  Aligned_cols=237  Identities=35%  Similarity=0.569  Sum_probs=209.1

Q ss_pred             EEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh-hHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcccE
Q 024230           23 ALVTGGTKGLGLAVVEELSMLGATVHTCSRTE-TELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNI  101 (270)
Q Consensus        23 vlItG~s~giG~~la~~l~~~G~~v~l~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~  101 (270)
                      +||||++++||+.++++|+++|++|++++|+. +..+...+.++..+.++.++.+|++++++++++++++...+ +++|+
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id~   79 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEEL-GPIDI   79 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh-CCCCE
Confidence            58999999999999999999999999999875 45556666676667788999999999999999999998888 79999


Q ss_pred             EEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHHHHHH
Q 024230          102 FVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLA  181 (270)
Q Consensus       102 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal~~~~  181 (270)
                      +||++|.....++.+.+.+++++.+++|+.+++.+++.+.+++.+.+.++++++||..+..+.+....|+++|++++.++
T Consensus        80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~~~y~~~k~a~~~~~  159 (239)
T TIGR01830        80 LVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFT  159 (239)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCCchhHHHHHHHHHHH
Confidence            99999987777777888999999999999999999999999998777789999999999998899999999999999999


Q ss_pred             HHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEEeecCC
Q 024230          182 KNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGG  261 (270)
Q Consensus       182 ~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG  261 (270)
                      +.++.++.+.|++++.++||+++|++....  ............+.++..+++|+++.+++++++...+.+|+++++|+|
T Consensus       160 ~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~g  237 (239)
T TIGR01830       160 KSLAKELASRNITVNAVAPGFIDTDMTDKL--SEKVKKKILSQIPLGRFGTPEEVANAVAFLASDEASYITGQVIHVDGG  237 (239)
T ss_pred             HHHHHHHhhcCeEEEEEEECCCCChhhhhc--ChHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCcccCCcCCCEEEeCCC
Confidence            999999999999999999999999876543  222233344556677888999999999999988778899999999998


Q ss_pred             c
Q 024230          262 F  262 (270)
Q Consensus       262 ~  262 (270)
                      .
T Consensus       238 ~  238 (239)
T TIGR01830       238 M  238 (239)
T ss_pred             c
Confidence            5

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=100.00  E-value=2.2e-35  Score=246.95  Aligned_cols=220  Identities=25%  Similarity=0.332  Sum_probs=184.1

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCC--CeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLG--ATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G--~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      |+++||||++|||+++|++|+++|  +.|++..|+....      .  .+.++.++++|+++.++++++.    +.+ ++
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~------~--~~~~~~~~~~Dls~~~~~~~~~----~~~-~~   67 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD------F--QHDNVQWHALDVTDEAEIKQLS----EQF-TQ   67 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc------c--ccCceEEEEecCCCHHHHHHHH----Hhc-CC
Confidence            579999999999999999999996  5676667654321      1  2346888999999999888754    334 78


Q ss_pred             ccEEEECCCCCC------CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccc---cCCCChh
Q 024230           99 LNIFVNNVGTSV------LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIV---SANVGTV  169 (270)
Q Consensus        99 id~li~~ag~~~------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~---~~~~~~~  169 (270)
                      +|++|||+|...      ..++.+.+.+.|++.+.+|+.+++.+++.++|.|++.+.++++++||..+..   +.+++..
T Consensus        68 id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~~~~~~~  147 (235)
T PRK09009         68 LDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGWYS  147 (235)
T ss_pred             CCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCCCCCcch
Confidence            999999999864      3456778899999999999999999999999999887778999998866533   2355678


Q ss_pred             hhhhHHHHHHHHHHHHHHHcc--CCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCC
Q 024230          170 YSATKGAMNQLAKNLACEWAK--DNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA  247 (270)
Q Consensus       170 y~~sKaal~~~~~sla~el~~--~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (270)
                      |+++|+++++|+++|+.|+.+  .+|+|++|+||+++|+|....          ....+.++..+|+|+++.+.+++++.
T Consensus       148 Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~----------~~~~~~~~~~~~~~~a~~~~~l~~~~  217 (235)
T PRK09009        148 YRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPF----------QQNVPKGKLFTPEYVAQCLLGIIANA  217 (235)
T ss_pred             hhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcch----------hhccccCCCCCHHHHHHHHHHHHHcC
Confidence            999999999999999999987  689999999999999987542          12345566789999999999999998


Q ss_pred             CCCccCcEEeecCCcc
Q 024230          248 ASYITGQTVCIDGGFT  263 (270)
Q Consensus       248 ~~~~~G~~i~vdgG~~  263 (270)
                      .++.+|+++.+||||.
T Consensus       218 ~~~~~g~~~~~~g~~~  233 (235)
T PRK09009        218 TPAQSGSFLAYDGETL  233 (235)
T ss_pred             ChhhCCcEEeeCCcCC
Confidence            8899999999999986

>PRK06914 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-34  Score=249.02  Aligned_cols=243  Identities=20%  Similarity=0.242  Sum_probs=204.7

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK--GLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      +++|+++||||+|+||+++++.|+++|++|++++|+++..++..+++...  +.++.++.+|++|++++++ ++++.+.+
T Consensus         1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~   79 (280)
T PRK06914          1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEI   79 (280)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhc
Confidence            46799999999999999999999999999999999998887776666543  3578899999999999999 88888888


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKG  175 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKa  175 (270)
                       +++|++|||+|....+.+.+.+.+++++.+++|+.+++.++++++|+|++.+.++||++||..+..+.++...|+++|+
T Consensus        80 -~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~  158 (280)
T PRK06914         80 -GRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKY  158 (280)
T ss_pred             -CCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCCchhHHhHH
Confidence             7999999999998877888889999999999999999999999999998887889999999999999899999999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC--------Ch---hhHHHHhh--cCCCCCCCChHhHHHHHHH
Q 024230          176 AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG--------NG---KFVDEVKS--RTPMGRLGEPKEVSSLVAF  242 (270)
Q Consensus       176 al~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~--------~~---~~~~~~~~--~~~~~~~~~~~dva~~~~~  242 (270)
                      ++++|+++++.|+.++||+++.++||+++|++......        ..   .....+..  ..+.+++.+++|+++++++
T Consensus       159 ~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  238 (280)
T PRK06914        159 ALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNPIDVANLIVE  238 (280)
T ss_pred             HHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccCCHHHHHHHHHH
Confidence            99999999999999999999999999999997643211        00   11111111  1234567899999999999


Q ss_pred             HhCCCCCCccCcEEeecCCcccc
Q 024230          243 LCMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       243 l~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                      ++++...   +..+.+++|+.+.
T Consensus       239 ~~~~~~~---~~~~~~~~~~~~~  258 (280)
T PRK06914        239 IAESKRP---KLRYPIGKGVKLM  258 (280)
T ss_pred             HHcCCCC---CcccccCCchHHH
Confidence            9976432   2567887776553

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.6e-34  Score=241.07  Aligned_cols=222  Identities=26%  Similarity=0.357  Sum_probs=197.6

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      .++++|+++|||++++||.+++++|+++|++|++++|+.+..++..+++...+.++.++.+|++++++++++++++.+.+
T Consensus         3 ~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (239)
T PRK07666          3 QSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNEL   82 (239)
T ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            45788999999999999999999999999999999999988888777777667789999999999999999999998888


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKG  175 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKa  175 (270)
                       +++|++|||+|.....++.+.+++++++.+++|+.+++.+++++.|+|.+++.+++|++||..+..+.+....|+.+|+
T Consensus        83 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~  161 (239)
T PRK07666         83 -GSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKF  161 (239)
T ss_pred             -CCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCCcchHHHHH
Confidence             7999999999987777788889999999999999999999999999998888889999999999999888899999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCC
Q 024230          176 AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA  247 (270)
Q Consensus       176 al~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (270)
                      +++.++++++.|+.+.||+++.|.||++.|++.......        ... ...+.+++|+++.+..+++..
T Consensus       162 a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~--------~~~-~~~~~~~~~~a~~~~~~l~~~  224 (239)
T PRK07666        162 GVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLGLT--------DGN-PDKVMQPEDLAEFIVAQLKLN  224 (239)
T ss_pred             HHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhcccc--------ccC-CCCCCCHHHHHHHHHHHHhCC
Confidence            999999999999999999999999999999876543111        011 124578999999999999753

>PRK07806 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.1e-35  Score=246.60  Aligned_cols=235  Identities=24%  Similarity=0.274  Sum_probs=192.1

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChh-HHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTET-ELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      ++++|+++|||++|+||++++++|+++|++|++++|+.+ ..+...++++..+.++.++.+|+++++++.++++++.+.+
T Consensus         3 ~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (248)
T PRK07806          3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEF   82 (248)
T ss_pred             CCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            478999999999999999999999999999999999754 4556666666656678889999999999999999998888


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccc-----ccCCCChhh
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGI-----VSANVGTVY  170 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~-----~~~~~~~~y  170 (270)
                       +++|++|||||.....   ..   +++..+++|+.+++++++++.|+|.+  .+++|++||..+.     .+.+.+..|
T Consensus        83 -~~~d~vi~~ag~~~~~---~~---~~~~~~~vn~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~~~~~~Y  153 (248)
T PRK07806         83 -GGLDALVLNASGGMES---GM---DEDYAMRLNRDAQRNLARAALPLMPA--GSRVVFVTSHQAHFIPTVKTMPEYEPV  153 (248)
T ss_pred             -CCCcEEEECCCCCCCC---CC---CcceeeEeeeHHHHHHHHHHHhhccC--CceEEEEeCchhhcCccccCCccccHH
Confidence             7899999999864322   11   24567899999999999999999854  4799999996553     223446789


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC--ChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCC
Q 024230          171 SATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG--NGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAA  248 (270)
Q Consensus       171 ~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  248 (270)
                      ++||++++.++++++.|+++.||+|+.|+||++.+++......  .+....  ..+.+.+++.+|+|+++++.++++  +
T Consensus       154 ~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~dva~~~~~l~~--~  229 (248)
T PRK07806        154 ARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGAIE--ARREAAGKLYTVSEFAAEVARAVT--A  229 (248)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHHHH--HHHhhhcccCCHHHHHHHHHHHhh--c
Confidence            9999999999999999999999999999999999987654321  111111  223566789999999999999997  4


Q ss_pred             CCccCcEEeecCCccc
Q 024230          249 SYITGQTVCIDGGFTV  264 (270)
Q Consensus       249 ~~~~G~~i~vdgG~~~  264 (270)
                      .+.+|+++.++||...
T Consensus       230 ~~~~g~~~~i~~~~~~  245 (248)
T PRK07806        230 PVPSGHIEYVGGADYF  245 (248)
T ss_pred             cccCccEEEecCccce
Confidence            6789999999999764

>PRK07775 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.7e-34  Score=244.02  Aligned_cols=230  Identities=17%  Similarity=0.246  Sum_probs=197.9

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      .++..|+++||||+++||++++++|+++|++|++++|+.+.+++....+...+.++.++.+|+++++++.++++++.+.+
T Consensus         6 ~~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   85 (274)
T PRK07775          6 PHPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEAL   85 (274)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            35677999999999999999999999999999999999888777777777667788899999999999999999998887


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKG  175 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKa  175 (270)
                       +++|++|||||.....+..+.+++++++++++|+.++++++++++|.|.+++.++||++||..++.+.+....|+++|+
T Consensus        86 -~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  164 (274)
T PRK07775         86 -GEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHMGAYGAAKA  164 (274)
T ss_pred             -CCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCcchHHHHHH
Confidence             7899999999987777788889999999999999999999999999998877789999999999988888889999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCCh--hhHHHHhh--cCCCCCCCChHhHHHHHHHHhCC
Q 024230          176 AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNG--KFVDEVKS--RTPMGRLGEPKEVSSLVAFLCMP  246 (270)
Q Consensus       176 al~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~dva~~~~~l~s~  246 (270)
                      ++++++++++.++.+.||+++.++||+++|++........  ........  .....++..++|++++++++++.
T Consensus       165 a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~  239 (274)
T PRK07775        165 GLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRASDLARAITFVAET  239 (274)
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhcccccccccCHHHHHHHHHHHhcC
Confidence            9999999999999999999999999999998654332110  11111111  12235678999999999999975

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=100.00  E-value=1.2e-34  Score=252.71  Aligned_cols=240  Identities=18%  Similarity=0.149  Sum_probs=191.1

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCC-CeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLG-ATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G-~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      +++|+++|||+++|||.++|++|+++| ++|++++|+++..+++.+++...+.++.++.+|+++.++++++++++.+.+ 
T Consensus         1 ~~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-   79 (314)
T TIGR01289         1 QQKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESG-   79 (314)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhC-
Confidence            358999999999999999999999999 999999999988887777776555678889999999999999999998877 


Q ss_pred             CcccEEEECCCCCCC-CCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CcEEEEecCcccccc----------
Q 024230           97 GKLNIFVNNVGTSVL-KPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG--AASIVLMSSALGIVS----------  163 (270)
Q Consensus        97 ~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~--~g~ii~iss~~~~~~----------  163 (270)
                      +++|++|||||+... .+..+.+.++|++++++|+.+++.+++.++|+|++.+  .++||++||..+...          
T Consensus        80 ~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~  159 (314)
T TIGR01289        80 RPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKA  159 (314)
T ss_pred             CCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcc
Confidence            799999999997532 3345678999999999999999999999999998764  479999999976421          


Q ss_pred             -----------------------CCCChhhhhhHHHHHHHHHHHHHHHc-cCCceEEEEecCcc-cCCCCccccCChhhH
Q 024230          164 -----------------------ANVGTVYSATKGAMNQLAKNLACEWA-KDNIRTNSVAPWYI-RTPFTEPLLGNGKFV  218 (270)
Q Consensus       164 -----------------------~~~~~~y~~sKaal~~~~~sla~el~-~~~i~v~~v~pG~v-~t~~~~~~~~~~~~~  218 (270)
                                             ..+...|++||+|+..+++.+++++. +.||+|++|+||++ +|+|.+.........
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~  239 (314)
T TIGR01289       160 NLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRTL  239 (314)
T ss_pred             cccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHHH
Confidence                                   12346799999999999999999985 46899999999999 699876532111100


Q ss_pred             HHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEEee
Q 024230          219 DEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCI  258 (270)
Q Consensus       219 ~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~v  258 (270)
                      .........+...++++.++.+++++.+.....+|..+.-
T Consensus       240 ~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~  279 (314)
T TIGR01289       240 FPPFQKYITKGYVSEEEAGERLAQVVSDPKLKKSGVYWSW  279 (314)
T ss_pred             HHHHHHHHhccccchhhhhhhhHHhhcCcccCCCceeeec
Confidence            0001111123456899999999998876544456776654

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=100.00  E-value=3.1e-34  Score=242.11  Aligned_cols=231  Identities=21%  Similarity=0.300  Sum_probs=193.3

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      ++++|||++|+||.+++++|+++|++|++++|+++.++.+...+   +.++.++.+|+++.++++++++++.+.+ +++|
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~i~~~~~~~~~~~-~~id   76 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEW-RNID   76 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---ccceEEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence            47999999999999999999999999999999988776655443   3468889999999999999999998888 7899


Q ss_pred             EEEECCCCCC-CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHHHH
Q 024230          101 IFVNNVGTSV-LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQ  179 (270)
Q Consensus       101 ~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal~~  179 (270)
                      ++|||+|... ..++.+.+.++|++++++|+.+++.+++.++|+|.+.+.++||++||..+..+.++...|+++|+++++
T Consensus        77 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~  156 (248)
T PRK10538         77 VLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQ  156 (248)
T ss_pred             EEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCCCchhHHHHHHHHH
Confidence            9999999753 456778899999999999999999999999999988878899999999988888888999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEecCcccCCCCcc--ccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEEe
Q 024230          180 LAKNLACEWAKDNIRTNSVAPWYIRTPFTEP--LLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVC  257 (270)
Q Consensus       180 ~~~sla~el~~~~i~v~~v~pG~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~  257 (270)
                      +++.++.|+.+.||+++.|.||++.+++...  +..........   .......+|+|+|++++|+++....+.+++...
T Consensus       157 ~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~~  233 (248)
T PRK10538        157 FSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKT---YQNTVALTPEDVSEAVWWVATLPAHVNINTLEM  233 (248)
T ss_pred             HHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHHhh---ccccCCCCHHHHHHHHHHHhcCCCcccchhhcc
Confidence            9999999999999999999999998554322  11111111111   112235689999999999999777777776654


Q ss_pred             e
Q 024230          258 I  258 (270)
Q Consensus       258 v  258 (270)
                      +
T Consensus       234 ~  234 (248)
T PRK10538        234 M  234 (248)
T ss_pred             c
Confidence            3

>PRK06924 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6e-35  Score=246.63  Aligned_cols=236  Identities=19%  Similarity=0.226  Sum_probs=195.4

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh-hHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC-c
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTE-TELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG-K   98 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~-~   98 (270)
                      |+++||||++|||++++++|+++|++|++++|++ +.++++.   ...+.++.++.+|+++.++++++++++.+.+.. .
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~   78 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLA---EQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDN   78 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHH---hccCCceEEEEecCCCHHHHHHHHHHHHHhcCccc
Confidence            7899999999999999999999999999999987 3333322   223567888999999999999999998776621 2


Q ss_pred             c--cEEEECCCCCC-CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEecCccccccCCCChhhhhhH
Q 024230           99 L--NIFVNNVGTSV-LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRAS-GAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        99 i--d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                      +  +++|||+|... ..++.+.+.++|++.+++|+.+++.+++.++|+|++. ..++||++||..+..+.++...|+++|
T Consensus        79 ~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  158 (251)
T PRK06924         79 VSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSSK  158 (251)
T ss_pred             CCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcHHHhHHH
Confidence            2  28999999853 4677889999999999999999999999999999875 357899999999998999999999999


Q ss_pred             HHHHHHHHHHHHHHc--cCCceEEEEecCcccCCCCccccC----ChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCC
Q 024230          175 GAMNQLAKNLACEWA--KDNIRTNSVAPWYIRTPFTEPLLG----NGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAA  248 (270)
Q Consensus       175 aal~~~~~sla~el~--~~~i~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  248 (270)
                      +++++|+++++.|++  +.+|+|++|.||+++|++......    .....+.+....+.+++.+|+|+++.+++++++. 
T Consensus       159 aa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~-  237 (251)
T PRK06924        159 AGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKEEGKLLSPEYVAKALRNLLETE-  237 (251)
T ss_pred             HHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhhcCCcCCHHHHHHHHHHHHhcc-
Confidence            999999999999986  468999999999999998653211    1111223333446678899999999999999874 


Q ss_pred             CCccCcEEeecC
Q 024230          249 SYITGQTVCIDG  260 (270)
Q Consensus       249 ~~~~G~~i~vdg  260 (270)
                      .+++|+.+.+|+
T Consensus       238 ~~~~G~~~~v~~  249 (251)
T PRK06924        238 DFPNGEVIDIDE  249 (251)
T ss_pred             cCCCCCEeehhh
Confidence            889999999986

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=100.00  E-value=4.4e-34  Score=241.34  Aligned_cols=242  Identities=38%  Similarity=0.575  Sum_probs=203.2

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhH--HHHHHHHHHhcC-CeEEEEEccCCC-HHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETE--LNECIHHLQMKG-LKVTGSVCDVSS-RPQRQTLINTV   91 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~--~~~~~~~~~~~~-~~~~~~~~D~~~-~~~~~~~~~~i   91 (270)
                      +++++|+++|||+++|||+++|+.|+++|++|+++.++.+.  .+...+.....+ ..+.+..+|+++ .++++.+++.+
T Consensus         1 ~~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~   80 (251)
T COG1028           1 MDLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAA   80 (251)
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHH
Confidence            36789999999999999999999999999998888887664  333333333222 368888999998 99999999999


Q ss_pred             HHHcCCcccEEEECCCCCCC-CCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCC-hh
Q 024230           92 SSLFNGKLNIFVNNVGTSVL-KPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG-TV  169 (270)
Q Consensus        92 ~~~~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~-~~  169 (270)
                      .+.+ +++|++|||||.... .++.+.+.++|++++++|+.+++.+++.+.|+|.++   +||++||..+. ..++. ..
T Consensus        81 ~~~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~---~Iv~isS~~~~-~~~~~~~~  155 (251)
T COG1028          81 EEEF-GRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ---RIVNISSVAGL-GGPPGQAA  155 (251)
T ss_pred             HHHc-CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC---eEEEECCchhc-CCCCCcch
Confidence            9988 899999999999887 488999999999999999999999999888888843   99999999999 77774 99


Q ss_pred             hhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChh-hHHHHhhcCCCCCCCChHhHHHHHHHHhCCC-
Q 024230          170 YSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGK-FVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA-  247 (270)
Q Consensus       170 y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~-  247 (270)
                      |++||+|+++|+++++.|+.++||++++|+||+++|++......... .........+..+...|++++..+.|+.+.. 
T Consensus       156 Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (251)
T COG1028         156 YAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAALESAELEALKRLAARIPLGRLGTPEEVAAAVAFLASDEA  235 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchhhhhhhhhhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcch
Confidence            99999999999999999999999999999999999998876543320 0112222225557888999999999998764 


Q ss_pred             CCCccCcEEeecCCc
Q 024230          248 ASYITGQTVCIDGGF  262 (270)
Q Consensus       248 ~~~~~G~~i~vdgG~  262 (270)
                      ..+++|+.+.+|||+
T Consensus       236 ~~~~~g~~~~~~~~~  250 (251)
T COG1028         236 ASYITGQTLPVDGGL  250 (251)
T ss_pred             hccccCCEEEeCCCC
Confidence            789999999999986

>PRK05854 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-34  Score=252.28  Aligned_cols=242  Identities=22%  Similarity=0.210  Sum_probs=191.8

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK--GLKVTGSVCDVSSRPQRQTLINTV   91 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~i   91 (270)
                      +..+++||+++||||++|||.++|++|+++|++|++++|+.++.++..+++...  +.++.++.+|+++.++++++++++
T Consensus         8 ~~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~   87 (313)
T PRK05854          8 TVPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQL   87 (313)
T ss_pred             cCcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHH
Confidence            346789999999999999999999999999999999999999888888877654  346889999999999999999999


Q ss_pred             HHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC-------
Q 024230           92 SSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA-------  164 (270)
Q Consensus        92 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~-------  164 (270)
                      .+.+ +++|+||||||.... +..+.+.++++.++++|+.+++.+++.++|.|++. .++||++||..+..+.       
T Consensus        88 ~~~~-~~iD~li~nAG~~~~-~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~~~~~~~~~~  164 (313)
T PRK05854         88 RAEG-RPIHLLINNAGVMTP-PERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAARRGAINWDDLN  164 (313)
T ss_pred             HHhC-CCccEEEECCccccC-CccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhcCCCcCccccc
Confidence            8887 799999999998643 34467888999999999999999999999999765 5799999999775432       


Q ss_pred             -----CCChhhhhhHHHHHHHHHHHHHHH--ccCCceEEEEecCcccCCCCccccCC----hhhHHHHhhc-CCCC-CCC
Q 024230          165 -----NVGTVYSATKGAMNQLAKNLACEW--AKDNIRTNSVAPWYIRTPFTEPLLGN----GKFVDEVKSR-TPMG-RLG  231 (270)
Q Consensus       165 -----~~~~~y~~sKaal~~~~~sla~el--~~~~i~v~~v~pG~v~t~~~~~~~~~----~~~~~~~~~~-~~~~-~~~  231 (270)
                           ++...|+.||+|+.+|++.|++++  ...||+|++++||+++|++.......    ......+... .... ...
T Consensus       165 ~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (313)
T PRK05854        165 WERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRSLSARGFLVG  244 (313)
T ss_pred             ccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCccccccccccchhHHHHHHHHHHhhcccccC
Confidence                 345689999999999999999865  45789999999999999987542111    1111111110 0011 245


Q ss_pred             ChHhHHHHHHHHhCCCCCCccCcEEeec
Q 024230          232 EPKEVSSLVAFLCMPAASYITGQTVCID  259 (270)
Q Consensus       232 ~~~dva~~~~~l~s~~~~~~~G~~i~vd  259 (270)
                      ++++.+...+|++.+.. ..+|..+.-.
T Consensus       245 ~~~~ga~~~l~~a~~~~-~~~g~~~~~~  271 (313)
T PRK05854        245 TVESAILPALYAATSPD-AEGGAFYGPR  271 (313)
T ss_pred             CHHHHHHHhhheeeCCC-CCCCcEECCC
Confidence            78999999999886432 2356665443

>PRK06197 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-34  Score=251.49  Aligned_cols=243  Identities=21%  Similarity=0.181  Sum_probs=194.2

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK--GLKVTGSVCDVSSRPQRQTLINTV   91 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~i   91 (270)
                      ..++++||+++||||++|||.++|++|+++|++|++++|+.+..++..+++...  +.++.++.+|+++.++++++++++
T Consensus        10 ~~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~   89 (306)
T PRK06197         10 DIPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADAL   89 (306)
T ss_pred             ccccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHH
Confidence            357899999999999999999999999999999999999988877776666543  456888999999999999999999


Q ss_pred             HHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccc---------
Q 024230           92 SSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIV---------  162 (270)
Q Consensus        92 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~---------  162 (270)
                      .+.+ +++|++|||||....  ..+.+.++++..+++|+.+++.+++.++|.|++.+.++||++||..+..         
T Consensus        90 ~~~~-~~iD~li~nAg~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~  166 (306)
T PRK06197         90 RAAY-PRIDLLINNAGVMYT--PKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDL  166 (306)
T ss_pred             HhhC-CCCCEEEECCccccC--CCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCcccc
Confidence            9888 799999999997543  2346677899999999999999999999999887778999999987543         


Q ss_pred             ----cCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEE--ecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhH
Q 024230          163 ----SANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSV--APWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEV  236 (270)
Q Consensus       163 ----~~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v--~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  236 (270)
                          +.++...|++||+++++|++++++++++.|++++++  +||+++|++.+.+...  ....+....+. ...++++.
T Consensus       167 ~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~~~~--~~~~~~~~~~~-~~~~~~~g  243 (306)
T PRK06197        167 QWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLPRA--LRPVATVLAPL-LAQSPEMG  243 (306)
T ss_pred             CcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccCcHH--HHHHHHHHHhh-hcCCHHHH
Confidence                123456899999999999999999999888877665  6999999987654211  11111111111 13467777


Q ss_pred             HHHHHHHhCCCCCCccCcEEeecCCcc
Q 024230          237 SSLVAFLCMPAASYITGQTVCIDGGFT  263 (270)
Q Consensus       237 a~~~~~l~s~~~~~~~G~~i~vdgG~~  263 (270)
                      +...++++.+ ....+|..+..||+..
T Consensus       244 ~~~~~~~~~~-~~~~~g~~~~~~~~~~  269 (306)
T PRK06197        244 ALPTLRAATD-PAVRGGQYYGPDGFGE  269 (306)
T ss_pred             HHHHHHHhcC-CCcCCCeEEccCcccc
Confidence            7777777754 4567899888877653

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.8e-36  Score=231.38  Aligned_cols=241  Identities=29%  Similarity=0.439  Sum_probs=211.9

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      +.+|-+.+||||.+|+|++.|++|+++|+.|++++-...+.++..+++   |+++.+..+|++++++++.+++..+.+| 
T Consensus         6 s~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel---g~~~vf~padvtsekdv~aala~ak~kf-   81 (260)
T KOG1199|consen    6 STKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL---GGKVVFTPADVTSEKDVRAALAKAKAKF-   81 (260)
T ss_pred             hhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh---CCceEEeccccCcHHHHHHHHHHHHhhc-
Confidence            568899999999999999999999999999999999888888877766   6789999999999999999999999999 


Q ss_pred             CcccEEEECCCCCC-C-----CCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc------CCcEEEEecCccccccC
Q 024230           97 GKLNIFVNNVGTSV-L-----KPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRAS------GAASIVLMSSALGIVSA  164 (270)
Q Consensus        97 ~~id~li~~ag~~~-~-----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~------~~g~ii~iss~~~~~~~  164 (270)
                      |++|.++||||+.. .     ..-...+.|+|++++++|+.|+|++++.-.-.|-++      ++|.||+..|.++..+.
T Consensus        82 grld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq  161 (260)
T KOG1199|consen   82 GRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQ  161 (260)
T ss_pred             cceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCc
Confidence            89999999999842 2     222346899999999999999999999999888654      26899999999999999


Q ss_pred             CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCC-CCCChHhHHHHHHHH
Q 024230          165 NVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMG-RLGEPKEVSSLVAFL  243 (270)
Q Consensus       165 ~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dva~~~~~l  243 (270)
                      -++.+|++||.++.+++--++++++..|||++.|.||.++||+...+  .++.-..+....|++ |++.|.|-+..+-.+
T Consensus       162 ~gqaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllssl--pekv~~fla~~ipfpsrlg~p~eyahlvqai  239 (260)
T KOG1199|consen  162 TGQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSL--PEKVKSFLAQLIPFPSRLGHPHEYAHLVQAI  239 (260)
T ss_pred             cchhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhh--hHHHHHHHHHhCCCchhcCChHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999998776  233333445556765 788999999998877


Q ss_pred             hCCCCCCccCcEEeecCCcccc
Q 024230          244 CMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       244 ~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                      .  +..++||++|.+||-..++
T Consensus       240 i--enp~lngevir~dgalrm~  259 (260)
T KOG1199|consen  240 I--ENPYLNGEVIRFDGALRMP  259 (260)
T ss_pred             H--hCcccCCeEEEecceecCC
Confidence            7  7899999999999988764

>PRK06179 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-34  Score=245.77  Aligned_cols=220  Identities=25%  Similarity=0.316  Sum_probs=190.0

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      ++|+++||||+|+||++++++|+++|++|++++|+++..+.        ...+.++.+|++|+++++++++.+.+.+ ++
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~~~~~~~-g~   73 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP--------IPGVELLELDVTDDASVQAAVDEVIARA-GR   73 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc--------cCCCeeEEeecCCHHHHHHHHHHHHHhC-CC
Confidence            57899999999999999999999999999999998765432        1357789999999999999999999988 79


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHHH
Q 024230           99 LNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMN  178 (270)
Q Consensus        99 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal~  178 (270)
                      +|++|||||....+++.+.+.+++++++++|+.+++.++++++|+|++++.++||++||..+..+.+....|++||++++
T Consensus        74 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~  153 (270)
T PRK06179         74 IDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVE  153 (270)
T ss_pred             CCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCccHHHHHHHHHH
Confidence            99999999998888888999999999999999999999999999999888899999999999999999999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhH-------HHH--hhcCCCCCCCChHhHHHHHHHHhCCC
Q 024230          179 QLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFV-------DEV--KSRTPMGRLGEPKEVSSLVAFLCMPA  247 (270)
Q Consensus       179 ~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~-------~~~--~~~~~~~~~~~~~dva~~~~~l~s~~  247 (270)
                      +++++++.|+.+.||+++.|+||+++|++...........       ...  ....+..+..+|+++++.++++++..
T Consensus       154 ~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~  231 (270)
T PRK06179        154 GYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKADAPEVVADTVVKAALGP  231 (270)
T ss_pred             HHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCCCHHHHHHHHHHHHcCC
Confidence            9999999999999999999999999999876543211110       000  01123455678999999999999754

>PRK07904 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-34  Score=242.80  Aligned_cols=213  Identities=20%  Similarity=0.209  Sum_probs=182.5

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCC-CeEEEeeCChhH-HHHHHHHHHhcCC-eEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLG-ATVHTCSRTETE-LNECIHHLQMKGL-KVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G-~~v~l~~r~~~~-~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      .+|+++||||++|||+++|++|+++| ++|++++|+++. +++..+++...+. ++.++.+|++|+++++++++++.+ +
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-~   85 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA-G   85 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh-c
Confidence            46899999999999999999999995 899999999886 7777777776543 789999999999999999998876 4


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKG  175 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKa  175 (270)
                       +++|++|||+|......-...+.++..+++++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|++||+
T Consensus        86 -g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~~~~Y~~sKa  164 (253)
T PRK07904         86 -GDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRSNFVYGSTKA  164 (253)
T ss_pred             -CCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCCCcchHHHHH
Confidence             7999999999985432222234556678899999999999999999999888899999999998888788889999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCC
Q 024230          176 AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP  246 (270)
Q Consensus       176 al~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (270)
                      ++.+|+++++.|+.++||+|+.|+||+++|++......             .....+++|+|+.++..+.+
T Consensus       165 a~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~~~-------------~~~~~~~~~~A~~i~~~~~~  222 (253)
T PRK07904        165 GLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHAKE-------------APLTVDKEDVAKLAVTAVAK  222 (253)
T ss_pred             HHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccCCC-------------CCCCCCHHHHHHHHHHHHHc
Confidence            99999999999999999999999999999998754321             11246899999999999964

>PRK08267 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-34  Score=243.03  Aligned_cols=220  Identities=23%  Similarity=0.283  Sum_probs=190.5

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      |+++||||+++||++++++|+++|++|++++|+.+.++++...+.  +.++.++.+|+++.++++++++.+.+.+.+++|
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id   79 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG--AGNAWTGALDVTDRAAWDAALADFAAATGGRLD   79 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCC
Confidence            789999999999999999999999999999999988877766553  467889999999999999999998776337999


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHHHHH
Q 024230          101 IFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQL  180 (270)
Q Consensus       101 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal~~~  180 (270)
                      ++|||||.....++.+.+.+++++++++|+.+++.+++++.++|+.++.++||++||..+..+.+....|+.||+++++|
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~  159 (260)
T PRK08267         80 VLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRGL  159 (260)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCchhhHHHHHHHHHH
Confidence            99999999888888889999999999999999999999999999988789999999999999989999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCC
Q 024230          181 AKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP  246 (270)
Q Consensus       181 ~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (270)
                      +++++.|+.+.||++++|.||+++|++......  ........  ..+...+++++++.+++++..
T Consensus       160 ~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~--~~~~~~~~--~~~~~~~~~~va~~~~~~~~~  221 (260)
T PRK08267        160 TEALDLEWRRHGIRVADVMPLFVDTAMLDGTSN--EVDAGSTK--RLGVRLTPEDVAEAVWAAVQH  221 (260)
T ss_pred             HHHHHHHhcccCcEEEEEecCCcCCcccccccc--hhhhhhHh--hccCCCCHHHHHHHHHHHHhC
Confidence            999999999999999999999999998764111  11111111  123356899999999999843

>PRK08251 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-33  Score=236.62  Aligned_cols=215  Identities=22%  Similarity=0.305  Sum_probs=191.3

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK--GLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      ++|+++||||++|||++++++|+++|++|++++|+++..+++.+.+...  +.++.++.+|++++++++++++++.+.+ 
T Consensus         1 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   79 (248)
T PRK08251          1 TRQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDEL-   79 (248)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            4789999999999999999999999999999999998888877766553  5678999999999999999999999988 


Q ss_pred             CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCC-ChhhhhhHH
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANV-GTVYSATKG  175 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~-~~~y~~sKa  175 (270)
                      +++|++|||||+....++.+.+.+.+++.+++|+.+++.+++++.|+|++.+.++||++||..+..+.+. ...|+.||+
T Consensus        80 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~  159 (248)
T PRK08251         80 GGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAASKA  159 (248)
T ss_pred             CCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCCCcccHHHHHH
Confidence            7999999999998777788888999999999999999999999999998888889999999988887775 678999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCC
Q 024230          176 AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA  247 (270)
Q Consensus       176 al~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (270)
                      ++++++++++.++...||+++.|+||+++|++.+....             .....++++.++.++..+...
T Consensus       160 a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~-------------~~~~~~~~~~a~~i~~~~~~~  218 (248)
T PRK08251        160 GVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAKS-------------TPFMVDTETGVKALVKAIEKE  218 (248)
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcccc-------------CCccCCHHHHHHHHHHHHhcC
Confidence            99999999999999899999999999999997754321             123568999999998888643

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.4e-33  Score=234.00  Aligned_cols=236  Identities=23%  Similarity=0.315  Sum_probs=197.7

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      |++++|+++|||++++||.++++.|+++|++|++++|+++..+.+.+++... .++.++.+|++++++++++++++...+
T Consensus         1 ~~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~   79 (238)
T PRK05786          1 MRLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY-GNIHYVVGDVSSTESARNVIEKAAKVL   79 (238)
T ss_pred             CCcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEECCCCCHHHHHHHHHHHHHHh
Confidence            4688999999999999999999999999999999999998887766666543 368889999999999999999988877


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccc-ccCCCChhhhhhH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGI-VSANVGTVYSATK  174 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~-~~~~~~~~y~~sK  174 (270)
                       +++|.+|+++|.....++.  +.+++++++++|+.+++.+.+.++|.|.+  .+++|++||..+. .+.+....|++||
T Consensus        80 -~~id~ii~~ag~~~~~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~~~~~~~Y~~sK  154 (238)
T PRK05786         80 -NAIDGLVVTVGGYVEDTVE--EFSGLEEMLTNHIKIPLYAVNASLRFLKE--GSSIVLVSSMSGIYKASPDQLSYAVAK  154 (238)
T ss_pred             -CCCCEEEEcCCCcCCCchH--HHHHHHHHHHHhchHHHHHHHHHHHHHhc--CCEEEEEecchhcccCCCCchHHHHHH
Confidence             7899999999875544433  33889999999999999999999999864  4789999998774 3556678899999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCc
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ  254 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  254 (270)
                      ++++.++++++.++.+.||+++.|+||+++|++....    . .....  ....+..+++|+++.+.+++++...+++|+
T Consensus       155 ~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~----~-~~~~~--~~~~~~~~~~~va~~~~~~~~~~~~~~~g~  227 (238)
T PRK05786        155 AGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPER----N-WKKLR--KLGDDMAPPEDFAKVIIWLLTDEADWVDGV  227 (238)
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchh----h-hhhhc--cccCCCCCHHHHHHHHHHHhcccccCccCC
Confidence            9999999999999999999999999999999864221    1 11110  111246789999999999999888899999


Q ss_pred             EEeecCCccc
Q 024230          255 TVCIDGGFTV  264 (270)
Q Consensus       255 ~i~vdgG~~~  264 (270)
                      .+.+|||.+.
T Consensus       228 ~~~~~~~~~~  237 (238)
T PRK05786        228 VIPVDGGARL  237 (238)
T ss_pred             EEEECCcccc
Confidence            9999999764

>PRK06181 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.4e-33  Score=236.31  Aligned_cols=236  Identities=26%  Similarity=0.332  Sum_probs=198.9

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      +|+++||||+++||.+++++|+++|++|++++|+++..++..+.+...+.++.++.+|++|+++++.+++++.+.+ +++
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~i   79 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARF-GGI   79 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-CCC
Confidence            5789999999999999999999999999999999888877777777767788899999999999999999998888 789


Q ss_pred             cEEEECCCCCCCCCCCCC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHHH
Q 024230          100 NIFVNNVGTSVLKPTLEY-NAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMN  178 (270)
Q Consensus       100 d~li~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal~  178 (270)
                      |++|||+|.....++.+. +.+++++.+++|+.+++.+++.+.|+|.+. .+++|++||..++.+.++...|+++|++++
T Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~  158 (263)
T PRK06181         80 DILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS-RGQIVVVSSLAGLTGVPTRSGYAASKHALH  158 (263)
T ss_pred             CEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCEEEEEecccccCCCCCccHHHHHHHHHH
Confidence            999999998877777777 899999999999999999999999999765 489999999999988888999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEecCcccCCCCccccCC-hhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEEe
Q 024230          179 QLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN-GKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVC  257 (270)
Q Consensus       179 ~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~  257 (270)
                      +++++++.++.+.+++++.+.||++.|++....... .....  .......++.+|+|+++.+.++++..    .+..+.
T Consensus       159 ~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~~--~~~~~~~~~~~~~dva~~i~~~~~~~----~~~~~~  232 (263)
T PRK06181        159 GFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDGDGKPLG--KSPMQESKIMSAEECAEAILPAIARR----KRLLVM  232 (263)
T ss_pred             HHHHHHHHHhhhcCceEEEEecCccccCcchhhccccccccc--cccccccCCCCHHHHHHHHHHHhhCC----CCEEec
Confidence            999999999999999999999999999987654321 11100  00011236789999999999999643    233444


Q ss_pred             ecCCcc
Q 024230          258 IDGGFT  263 (270)
Q Consensus       258 vdgG~~  263 (270)
                      .+.||.
T Consensus       233 ~~~~~~  238 (263)
T PRK06181        233 SLRGRL  238 (263)
T ss_pred             CchHHH
Confidence            444443

>PRK07578 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-33  Score=229.80  Aligned_cols=198  Identities=24%  Similarity=0.272  Sum_probs=172.7

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      ++++|||+++|||++++++|+++ ++|++++|++.                 .+.+|++++++++++++++     +++|
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-----------------~~~~D~~~~~~~~~~~~~~-----~~id   57 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-----------------DVQVDITDPASIRALFEKV-----GKVD   57 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-----------------ceEecCCChHHHHHHHHhc-----CCCC
Confidence            37999999999999999999999 99999998753                 3679999999999888753     6899


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHHHHH
Q 024230          101 IFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQL  180 (270)
Q Consensus       101 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal~~~  180 (270)
                      ++|||+|.....++.+.+.++|++.+++|+.+++++++.+.|+|++  .++|+++||..+..+.++...|+++|+++++|
T Consensus        58 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~  135 (199)
T PRK07578         58 AVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND--GGSFTLTSGILSDEPIPGGASAATVNGALEGF  135 (199)
T ss_pred             EEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCeEEEEcccccCCCCCCchHHHHHHHHHHHH
Confidence            9999999877778888999999999999999999999999999965  47999999999998889999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEEee
Q 024230          181 AKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCI  258 (270)
Q Consensus       181 ~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~v  258 (270)
                      +++++.|+ ++||+|+.|+||+++|++...-           ...+.....+++|+++.+.++++   ...+|+++.+
T Consensus       136 ~~~la~e~-~~gi~v~~i~Pg~v~t~~~~~~-----------~~~~~~~~~~~~~~a~~~~~~~~---~~~~g~~~~~  198 (199)
T PRK07578        136 VKAAALEL-PRGIRINVVSPTVLTESLEKYG-----------PFFPGFEPVPAARVALAYVRSVE---GAQTGEVYKV  198 (199)
T ss_pred             HHHHHHHc-cCCeEEEEEcCCcccCchhhhh-----------hcCCCCCCCCHHHHHHHHHHHhc---cceeeEEecc
Confidence            99999999 8899999999999999864210           11223346789999999999985   3589998876

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=100.00  E-value=5.5e-33  Score=243.27  Aligned_cols=241  Identities=17%  Similarity=0.142  Sum_probs=189.1

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      +++++|+++||||++|||.+++++|+++|++|++++|+.++.++..+++...+.++.++.+|+++.++++++++++.+..
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   81 (322)
T PRK07453          2 SQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALG   81 (322)
T ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence            56789999999999999999999999999999999999998888877775445678899999999999999999987665


Q ss_pred             CCcccEEEECCCCCCC-CCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--cEEEEecCcccccc---------
Q 024230           96 NGKLNIFVNNVGTSVL-KPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGA--ASIVLMSSALGIVS---------  163 (270)
Q Consensus        96 ~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~--g~ii~iss~~~~~~---------  163 (270)
                       +++|++|||||.... .+..+.+.++++.++++|+.+++.+++.++|+|++.+.  ++||++||......         
T Consensus        82 -~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~  160 (322)
T PRK07453         82 -KPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIP  160 (322)
T ss_pred             -CCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCC
Confidence             689999999997543 23346789999999999999999999999999987753  59999999754320         


Q ss_pred             --------------------------CCCChhhhhhHHHHHHHHHHHHHHHc-cCCceEEEEecCcc-cCCCCccccCCh
Q 024230          164 --------------------------ANVGTVYSATKGAMNQLAKNLACEWA-KDNIRTNSVAPWYI-RTPFTEPLLGNG  215 (270)
Q Consensus       164 --------------------------~~~~~~y~~sKaal~~~~~sla~el~-~~~i~v~~v~pG~v-~t~~~~~~~~~~  215 (270)
                                                ......|+.||.+...+++.+++++. ..||++++++||+| .|++.+......
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~  240 (322)
T PRK07453        161 APADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLFRNTPPLF  240 (322)
T ss_pred             CccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCcccccCCHHH
Confidence                                      11235799999999999999999995 46899999999999 588765432111


Q ss_pred             hhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEEe
Q 024230          216 KFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVC  257 (270)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~  257 (270)
                      ................+++..++.+++++.+.....+|..+.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~  282 (322)
T PRK07453        241 QKLFPWFQKNITGGYVSQELAGERVAQVVADPEFAQSGVHWS  282 (322)
T ss_pred             HHHHHHHHHHHhhceecHHHHhhHHHHhhcCcccCCCCceee
Confidence            111111111112234577888888888887654456887775

>PRK07326 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-32  Score=230.16  Aligned_cols=227  Identities=27%  Similarity=0.398  Sum_probs=196.7

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      |.+++|+++||||+|+||.+++++|+++|++|++++|+++.+++..+++... .++.++.+|+++.++++++++++.+.+
T Consensus         2 ~~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (237)
T PRK07326          2 MSLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK-GNVLGLAADVRDEADVQRAVDAIVAAF   80 (237)
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc-CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            5578899999999999999999999999999999999998888877777654 578899999999999999999998887


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKG  175 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKa  175 (270)
                       +++|++||++|.....++.+.+.+++++.+++|+.+++.+++++++.|+ ++.+++|++||..+..+.+....|+++|+
T Consensus        81 -~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~iv~~ss~~~~~~~~~~~~y~~sk~  158 (237)
T PRK07326         81 -GGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALK-RGGGYIINISSLAGTNFFAGGAAYNASKF  158 (237)
T ss_pred             -CCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHH-HCCeEEEEECChhhccCCCCCchHHHHHH
Confidence             7999999999988777788899999999999999999999999999994 44589999999988888888889999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcE
Q 024230          176 AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT  255 (270)
Q Consensus       176 al~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  255 (270)
                      +++++++.++.|+...|++++.|.||++.|++.......     .      .....+++|+++.+.++++.....+.+++
T Consensus       159 a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~-----~------~~~~~~~~d~a~~~~~~l~~~~~~~~~~~  227 (237)
T PRK07326        159 GLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPSE-----K------DAWKIQPEDIAQLVLDLLKMPPRTLPSKI  227 (237)
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEeeccccCcccccccch-----h------hhccCCHHHHHHHHHHHHhCCccccccce
Confidence            999999999999999999999999999999865432110     0      01136899999999999987766655554


Q ss_pred             E
Q 024230          256 V  256 (270)
Q Consensus       256 i  256 (270)
                      -
T Consensus       228 ~  228 (237)
T PRK07326        228 E  228 (237)
T ss_pred             E
Confidence            4

>PRK06482 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-32  Score=234.10  Aligned_cols=237  Identities=20%  Similarity=0.263  Sum_probs=196.6

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      .|++|||||+|+||++++++|+++|++|++++|+++..+.+.+.+   +.++.++.+|++|.++++++++++.+.+ +++
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i   77 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY---GDRLWVLQLDVTDSAAVRAVVDRAFAAL-GRI   77 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cCceEEEEccCCCHHHHHHHHHHHHHHc-CCC
Confidence            479999999999999999999999999999999987766654433   3468889999999999999999998887 799


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHHHH
Q 024230          100 NIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQ  179 (270)
Q Consensus       100 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal~~  179 (270)
                      |++|||||.....+..+.+.+++++.+++|+.++++++++++|+|++++.++||++||..+..+.++...|++||+++++
T Consensus        78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  157 (276)
T PRK06482         78 DVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEG  157 (276)
T ss_pred             CEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCCCchhHHHHHHHHH
Confidence            99999999988888888899999999999999999999999999988877899999999988888889999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEecCcccCCCCccccCC-------hhhHHHHh---hcCCCCCCCChHhHHHHHHHHhCCCCC
Q 024230          180 LAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN-------GKFVDEVK---SRTPMGRLGEPKEVSSLVAFLCMPAAS  249 (270)
Q Consensus       180 ~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~-------~~~~~~~~---~~~~~~~~~~~~dva~~~~~l~s~~~~  249 (270)
                      |+++++.++.+.||+++.+.||++.|++.......       ......+.   .........+++|++++++..+...  
T Consensus       158 ~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~a~~~~~~~~--  235 (276)
T PRK06482        158 FVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSFAIPGDPQKMVQAMIASADQT--  235 (276)
T ss_pred             HHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccCCCCCCHHHHHHHHHHHHcCC--
Confidence            99999999999999999999999999876543211       11111111   1112223468999999999888543  


Q ss_pred             CccCcEEeecCCcc
Q 024230          250 YITGQTVCIDGGFT  263 (270)
Q Consensus       250 ~~~G~~i~vdgG~~  263 (270)
                       ..+..+++.+|..
T Consensus       236 -~~~~~~~~g~~~~  248 (276)
T PRK06482        236 -PAPRRLTLGSDAY  248 (276)
T ss_pred             -CCCeEEecChHHH
Confidence             2355677776643

>PRK07102 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-32  Score=231.31  Aligned_cols=212  Identities=22%  Similarity=0.262  Sum_probs=186.9

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhc-CCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK-GLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      +|+++||||+++||.+++++|+++|++|++++|+++..++..+.+... +.++.++.+|++++++++++++++..    +
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~----~   76 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA----L   76 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh----c
Confidence            378999999999999999999999999999999998887776666543 45789999999999999999887743    4


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHHH
Q 024230           99 LNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMN  178 (270)
Q Consensus        99 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal~  178 (270)
                      +|++|||+|.....++.+.+.+++.+.+++|+.+++++++++.|+|.+++.+++|++||..+..+.++...|+++|++++
T Consensus        77 ~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  156 (243)
T PRK07102         77 PDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAALT  156 (243)
T ss_pred             CCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCCCcccHHHHHHHH
Confidence            69999999987777778889999999999999999999999999999888899999999999888888899999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCC
Q 024230          179 QLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA  247 (270)
Q Consensus       179 ~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (270)
                      +++++++.|+.+.||+++.|+||+++|++.....            .+.....+++++++.+.++++..
T Consensus       157 ~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~~------------~~~~~~~~~~~~a~~i~~~~~~~  213 (243)
T PRK07102        157 AFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGLK------------LPGPLTAQPEEVAKDIFRAIEKG  213 (243)
T ss_pred             HHHHHHHHHhhccCcEEEEEecCcccChhhhccC------------CCccccCCHHHHHHHHHHHHhCC
Confidence            9999999999999999999999999998764321            12234678999999999999754

>PRK07023 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.2e-33  Score=234.39  Aligned_cols=222  Identities=22%  Similarity=0.285  Sum_probs=184.9

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH-HHHHcC--C
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINT-VSSLFN--G   97 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-i~~~~~--~   97 (270)
                      ++++|||++++||.+++++|+++|++|++++|+.+...     ....+.++.++.+|+++++++++++++ +.+.+.  +
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~   76 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSL-----AAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGA   76 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhh-----hhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCC
Confidence            47999999999999999999999999999999865421     223356788999999999999998877 555442  4


Q ss_pred             cccEEEECCCCCCC-CCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHH
Q 024230           98 KLNIFVNNVGTSVL-KPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGA  176 (270)
Q Consensus        98 ~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaa  176 (270)
                      ++|++|||+|.... .++.+.+.+++++.+++|+.+++.+++.+.+.|.+++.++||++||..+..+.+++..|+++|++
T Consensus        77 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  156 (243)
T PRK07023         77 SRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVYCATKAA  156 (243)
T ss_pred             CceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCchHHHHHHHH
Confidence            79999999998653 56778899999999999999999999999999988777899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC----hhhHHHHhhcCCCCCCCChHhHHH-HHHHHhCCCC
Q 024230          177 MNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN----GKFVDEVKSRTPMGRLGEPKEVSS-LVAFLCMPAA  248 (270)
Q Consensus       177 l~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~dva~-~~~~l~s~~~  248 (270)
                      +++++++++.+ .+.||+++.|+||+++|++...+...    ......+....+.++..+|+|+|+ .+.+|.++..
T Consensus       157 ~~~~~~~~~~~-~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~l~~~~~  232 (243)
T PRK07023        157 LDHHARAVALD-ANRALRIVSLAPGVVDTGMQATIRATDEERFPMRERFRELKASGALSTPEDAARRLIAYLLSDDF  232 (243)
T ss_pred             HHHHHHHHHhc-CCCCcEEEEecCCccccHHHHHHHhcccccchHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcccc
Confidence            99999999999 78899999999999999976433211    112233445566788999999999 5677776653

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=3e-33  Score=219.50  Aligned_cols=186  Identities=30%  Similarity=0.423  Sum_probs=171.8

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      |.+.|.+||||||++|||+++|++|.+.|.+|++++|+++.+++..++.    ..++...||+.|.++.+++++++.+.+
T Consensus         1 mk~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~----p~~~t~v~Dv~d~~~~~~lvewLkk~~   76 (245)
T COG3967           1 MKTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN----PEIHTEVCDVADRDSRRELVEWLKKEY   76 (245)
T ss_pred             CcccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC----cchheeeecccchhhHHHHHHHHHhhC
Confidence            5788999999999999999999999999999999999999998877765    357788999999999999999999998


Q ss_pred             CCcccEEEECCCCCCCCCC--CCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhh
Q 024230           96 NGKLNIFVNNVGTSVLKPT--LEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                       ..++++|||||+...-.+  .+...++.++.+.+|+.++.++++.|+|++.++..+.||+|||..+..|-...+.||++
T Consensus        77 -P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~PvYcaT  155 (245)
T COG3967          77 -PNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCAT  155 (245)
T ss_pred             -CchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccccchhh
Confidence             689999999999755444  35677888999999999999999999999999988999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCC
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTP  206 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~  206 (270)
                      |+|+..|+.+|+..+...+|.|--+.|-.|+|+
T Consensus       156 KAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         156 KAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             HHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence            999999999999999988999999999999996

>PRK07201 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.6e-33  Score=263.14  Aligned_cols=219  Identities=23%  Similarity=0.302  Sum_probs=193.7

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      .+++||+++||||++|||++++++|+++|++|++++|+++.+++..+++...+.++.++.+|++|.++++++++++.+.+
T Consensus       367 ~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  446 (657)
T PRK07201        367 GPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEH  446 (657)
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            37889999999999999999999999999999999999999888888887777789999999999999999999999988


Q ss_pred             CCcccEEEECCCCCCCCCCCCC--CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhh
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEY--NAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                       +++|++|||||......+.+.  +.+++++++++|+.+++.+++.++|+|++++.|+||++||..++.+.++...|++|
T Consensus       447 -g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  525 (657)
T PRK07201        447 -GHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYVAS  525 (657)
T ss_pred             -CCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCcchHHHH
Confidence             799999999998654444332  36889999999999999999999999998888999999999999998999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCC
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP  246 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (270)
                      |+++++|+++++.|+.+.||+|+.|+||+++|+|.......           ......+|+++|+.++..+..
T Consensus       526 K~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~~~-----------~~~~~~~~~~~a~~i~~~~~~  587 (657)
T PRK07201        526 KAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTKRY-----------NNVPTISPEEAADMVVRAIVE  587 (657)
T ss_pred             HHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCccccc-----------cCCCCCCHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999987542110           112356899999999987754

>PRK05693 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-32  Score=234.76  Aligned_cols=218  Identities=21%  Similarity=0.303  Sum_probs=183.0

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      |+++||||++|||++++++|+++|++|++++|+++..++..    ..  .+.++.+|+++.++++++++++.+.+ +++|
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~----~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~id   74 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA----AA--GFTAVQLDVNDGAALARLAEELEAEH-GGLD   74 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HC--CCeEEEeeCCCHHHHHHHHHHHHHhc-CCCC
Confidence            79999999999999999999999999999999987655432    22  35678999999999999999998887 7999


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHHHHH
Q 024230          101 IFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQL  180 (270)
Q Consensus       101 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal~~~  180 (270)
                      ++|||||....+++.+.+.+++++.+++|+.+++.++++++|+|++. .|+||++||..+..+.+....|++||++++.+
T Consensus        75 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~  153 (274)
T PRK05693         75 VLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS-RGLVVNIGSVSGVLVTPFAGAYCASKAAVHAL  153 (274)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCEEEEECCccccCCCCCccHHHHHHHHHHHH
Confidence            99999998877888889999999999999999999999999999764 48999999999998888899999999999999


Q ss_pred             HHHHHHHHccCCceEEEEecCcccCCCCccccCCh--------hh---HHHHhh--cCCCCCCCChHhHHHHHHHHhCC
Q 024230          181 AKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNG--------KF---VDEVKS--RTPMGRLGEPKEVSSLVAFLCMP  246 (270)
Q Consensus       181 ~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~--------~~---~~~~~~--~~~~~~~~~~~dva~~~~~l~s~  246 (270)
                      +++++.|+.+.||+|+.++||+++|++........        .+   .+.+..  ........+|+++++.++..+..
T Consensus       154 ~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~  232 (274)
T PRK05693        154 SDALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARARASQDNPTPAAEFARQLLAAVQQ  232 (274)
T ss_pred             HHHHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHhC
Confidence            99999999999999999999999999876532110        01   111110  01112345899999999888754

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3.9e-32  Score=234.02  Aligned_cols=235  Identities=25%  Similarity=0.332  Sum_probs=193.1

Q ss_pred             cccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHH
Q 024230           13 QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK--GLKVTGSVCDVSSRPQRQTLINT   90 (270)
Q Consensus        13 ~~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~   90 (270)
                      ....+++|++++|||+++|||.++|+.|+.+|++|++..|+.+..++..++++..  ..++.++.+|+++.+++.+++++
T Consensus        28 ~~~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~  107 (314)
T KOG1208|consen   28 THGIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEE  107 (314)
T ss_pred             eccccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHH
Confidence            4467899999999999999999999999999999999999999999999999863  35688899999999999999999


Q ss_pred             HHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccccc-------
Q 024230           91 VSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVS-------  163 (270)
Q Consensus        91 i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~-------  163 (270)
                      +.... .++|++|||||+.....  ..+.|.++..+.+|+.|++.+++.++|.|++...++||++||......       
T Consensus       108 ~~~~~-~~ldvLInNAGV~~~~~--~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~  184 (314)
T KOG1208|consen  108 FKKKE-GPLDVLINNAGVMAPPF--SLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLS  184 (314)
T ss_pred             HHhcC-CCccEEEeCcccccCCc--ccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhcc
Confidence            99887 79999999999976544  677789999999999999999999999999887789999999875110       


Q ss_pred             ------CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCC-CCccccCChhhHHHHhhcCCCCCCCChHhH
Q 024230          164 ------ANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTP-FTEPLLGNGKFVDEVKSRTPMGRLGEPKEV  236 (270)
Q Consensus       164 ------~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  236 (270)
                            ......|+.||.++..+++.|++.+.. ||.+++++||.++|+ +.+ .   ......+..........++++.
T Consensus       185 ~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~~~~hPG~v~t~~l~r-~---~~~~~~l~~~l~~~~~ks~~~g  259 (314)
T KOG1208|consen  185 GEKAKLYSSDAAYALSKLANVLLANELAKRLKK-GVTTYSVHPGVVKTTGLSR-V---NLLLRLLAKKLSWPLTKSPEQG  259 (314)
T ss_pred             chhccCccchhHHHHhHHHHHHHHHHHHHHhhc-CceEEEECCCcccccceec-c---hHHHHHHHHHHHHHhccCHHHH
Confidence                  112235999999999999999999988 999999999999998 665 1   1111112222222223589999


Q ss_pred             HHHHHHHhCC-CCCCccCcE
Q 024230          237 SSLVAFLCMP-AASYITGQT  255 (270)
Q Consensus       237 a~~~~~l~s~-~~~~~~G~~  255 (270)
                      |+..+|.+-+ +-...+|..
T Consensus       260 a~t~~~~a~~p~~~~~sg~y  279 (314)
T KOG1208|consen  260 AATTCYAALSPELEGVSGKY  279 (314)
T ss_pred             hhheehhccCccccCccccc
Confidence            9999999864 334445544

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=4.2e-33  Score=219.66  Aligned_cols=186  Identities=23%  Similarity=0.308  Sum_probs=168.9

Q ss_pred             CCCEEEEecCC-CcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           19 QGMTALVTGGT-KGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        19 ~gk~vlItG~s-~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      +.|.|+|||++ ||||.++|++|+++|+.|+.++|+.+...++..+     ..+....+|+++++++..+..++++..+|
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~-----~gl~~~kLDV~~~~~V~~v~~evr~~~~G   80 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQ-----FGLKPYKLDVSKPEEVVTVSGEVRANPDG   80 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHh-----hCCeeEEeccCChHHHHHHHHHHhhCCCC
Confidence            46889998876 8999999999999999999999998877665432     23778899999999999999999996559


Q ss_pred             cccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHH
Q 024230           98 KLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAM  177 (270)
Q Consensus        98 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal  177 (270)
                      ++|+|+||||..-..|..+.+.++.++.+++|++|++.+++++. +|..+.+|+|||++|+.++.+.|..+.|++||+|+
T Consensus        81 kld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~-h~likaKGtIVnvgSl~~~vpfpf~~iYsAsKAAi  159 (289)
T KOG1209|consen   81 KLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALS-HFLIKAKGTIVNVGSLAGVVPFPFGSIYSASKAAI  159 (289)
T ss_pred             ceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHH-HHHHHccceEEEecceeEEeccchhhhhhHHHHHH
Confidence            99999999999888899999999999999999999999999999 55555579999999999999999999999999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEecCcccCCCCcc
Q 024230          178 NQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEP  210 (270)
Q Consensus       178 ~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~  210 (270)
                      .++++.|..|++++||+|..+.||-|.|+....
T Consensus       160 hay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k  192 (289)
T KOG1209|consen  160 HAYARTLRLELKPFGVRVINAITGGVATDIADK  192 (289)
T ss_pred             HHhhhhcEEeeeccccEEEEecccceecccccC
Confidence            999999999999999999999999999987655

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=100.00  E-value=6.7e-32  Score=225.66  Aligned_cols=194  Identities=23%  Similarity=0.266  Sum_probs=177.6

Q ss_pred             cccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           13 QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        13 ~~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      +..-++.+|.|+|||..+|+|..+|++|.++|+.|..-...++..+.+..++.  ..+...++.|++++++++++.+.++
T Consensus        22 ~~~~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~--s~rl~t~~LDVT~~esi~~a~~~V~   99 (322)
T KOG1610|consen   22 QVLDSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK--SPRLRTLQLDVTKPESVKEAAQWVK   99 (322)
T ss_pred             hcccccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc--CCcceeEeeccCCHHHHHHHHHHHH
Confidence            34457889999999999999999999999999999998888888777777664  5678888999999999999999999


Q ss_pred             HHcC-CcccEEEECCCCC-CCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhh
Q 024230           93 SLFN-GKLNIFVNNVGTS-VLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVY  170 (270)
Q Consensus        93 ~~~~-~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y  170 (270)
                      ++.+ ..+-.+|||||+. ..++.+=++.+++++++++|++|++.++++|+|++++.+ |+||++||.+|..+.|...+|
T Consensus       100 ~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar-GRvVnvsS~~GR~~~p~~g~Y  178 (322)
T KOG1610|consen  100 KHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR-GRVVNVSSVLGRVALPALGPY  178 (322)
T ss_pred             HhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc-CeEEEecccccCccCcccccc
Confidence            9876 4699999999965 577777899999999999999999999999999998774 999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCc
Q 024230          171 SATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTE  209 (270)
Q Consensus       171 ~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~  209 (270)
                      ++||+|++.|+.++++|+.++||.|..|.||.++|++..
T Consensus       179 ~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~  217 (322)
T KOG1610|consen  179 CVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN  217 (322)
T ss_pred             hhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence            999999999999999999999999999999999999875

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=100.00  E-value=6.3e-32  Score=214.32  Aligned_cols=163  Identities=33%  Similarity=0.448  Sum_probs=153.9

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCC--hhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRT--ETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      |+++||||++|||++++++|+++|+ +|++++|+  .+..+++..++...+.++.++++|++++++++++++++.+.+ +
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~   79 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRF-G   79 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHH-S
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccc-c
Confidence            7899999999999999999999965 68899999  777888888888888999999999999999999999999887 8


Q ss_pred             cccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHH
Q 024230           98 KLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAM  177 (270)
Q Consensus        98 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal  177 (270)
                      ++|++|||+|....+++.+.+.++|++++++|+.+++.+.+.+.|    ++.|+||++||..+..+.+++..|++||+|+
T Consensus        80 ~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~----~~~g~iv~~sS~~~~~~~~~~~~Y~askaal  155 (167)
T PF00106_consen   80 PLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP----QGGGKIVNISSIAGVRGSPGMSAYSASKAAL  155 (167)
T ss_dssp             SESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH----HTTEEEEEEEEGGGTSSSTTBHHHHHHHHHH
T ss_pred             cccccccccccccccccccccchhhhhccccccceeeeeeehhee----ccccceEEecchhhccCCCCChhHHHHHHHH
Confidence            999999999999989999999999999999999999999999999    4479999999999999999999999999999


Q ss_pred             HHHHHHHHHHH
Q 024230          178 NQLAKNLACEW  188 (270)
Q Consensus       178 ~~~~~sla~el  188 (270)
                      ++|++++++|+
T Consensus       156 ~~~~~~la~e~  166 (167)
T PF00106_consen  156 RGLTQSLAAEL  166 (167)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHhc
Confidence            99999999996

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK06101 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-31  Score=222.46  Aligned_cols=204  Identities=19%  Similarity=0.257  Sum_probs=173.6

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      |+++||||++|||.+++++|+++|++|++++|+++.++++.+    ...++.++.+|+++.++++++++++.    ..+|
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~----~~~d   73 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHT----QSANIFTLAFDVTDHPGTKAALSQLP----FIPE   73 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----hcCCCeEEEeeCCCHHHHHHHHHhcc----cCCC
Confidence            789999999999999999999999999999999877655433    23467889999999999999988753    3579


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHHHHH
Q 024230          101 IFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQL  180 (270)
Q Consensus       101 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal~~~  180 (270)
                      .+|||||.....+..+.+.++|++++++|+.+++++++++.|+|.+  ++++|++||..+..+.++...|+++|+++++|
T Consensus        74 ~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~  151 (240)
T PRK06101         74 LWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC--GHRVVIVGSIASELALPRAEAYGASKAAVAYF  151 (240)
T ss_pred             EEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCeEEEEechhhccCCCCCchhhHHHHHHHHH
Confidence            9999998754444556889999999999999999999999999954  46899999999999888999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCC
Q 024230          181 AKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP  246 (270)
Q Consensus       181 ~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (270)
                      +++++.|+.++||+++.+.||+++|++.....            .......+++++++.++.....
T Consensus       152 ~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~------------~~~~~~~~~~~~a~~i~~~i~~  205 (240)
T PRK06101        152 ARTLQLDLRPKGIEVVTVFPGFVATPLTDKNT------------FAMPMIITVEQASQEIRAQLAR  205 (240)
T ss_pred             HHHHHHHHHhcCceEEEEeCCcCCCCCcCCCC------------CCCCcccCHHHHHHHHHHHHhc
Confidence            99999999999999999999999999765321            0112246899999999887754

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-32  Score=229.44  Aligned_cols=206  Identities=24%  Similarity=0.291  Sum_probs=169.4

Q ss_pred             HHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcccEEEECCCCCCCCCCC
Q 024230           36 VVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTL  115 (270)
Q Consensus        36 la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~li~~ag~~~~~~~~  115 (270)
                      +|++|+++|++|++++|++++.+.           ..++.+|++|.++++++++++.    +++|++|||||....    
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~~-----------~~~~~~Dl~~~~~v~~~~~~~~----~~iD~li~nAG~~~~----   61 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMTL-----------DGFIQADLGDPASIDAAVAALP----GRIDALFNIAGVPGT----   61 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhhh-----------hHhhcccCCCHHHHHHHHHHhc----CCCeEEEECCCCCCC----
Confidence            578999999999999998776421           2356899999999999988762    589999999997532    


Q ss_pred             CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccc---------------------------cCCCCh
Q 024230          116 EYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIV---------------------------SANVGT  168 (270)
Q Consensus       116 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~---------------------------~~~~~~  168 (270)
                          +++++++++|+.+++.+++.++|+|.+  .|+||++||..++.                           +.++..
T Consensus        62 ----~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  135 (241)
T PRK12428         62 ----APVELVARVNFLGLRHLTEALLPRMAP--GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALAT  135 (241)
T ss_pred             ----CCHHHhhhhchHHHHHHHHHHHHhccC--CcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCccc
Confidence                247899999999999999999999964  47999999998863                           455678


Q ss_pred             hhhhhHHHHHHHHHHHH-HHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCC
Q 024230          169 VYSATKGAMNQLAKNLA-CEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA  247 (270)
Q Consensus       169 ~y~~sKaal~~~~~sla-~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (270)
                      .|++||+++++++++++ .|++++||+|++|+||+++|+|..................+.+++.+|+|+++.+.||+++.
T Consensus       136 ~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~l~s~~  215 (241)
T PRK12428        136 GYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQERVDSDAKRMGRPATADEQAAVLVFLCSDA  215 (241)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhhhHhhhhcccccCCCCCHHHHHHHHHHHcChh
Confidence            99999999999999999 99999999999999999999997654321110011112356778899999999999999988


Q ss_pred             CCCccCcEEeecCCccccc
Q 024230          248 ASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       248 ~~~~~G~~i~vdgG~~~~~  266 (270)
                      +++++|+.+.+|||+...+
T Consensus       216 ~~~~~G~~i~vdgg~~~~~  234 (241)
T PRK12428        216 ARWINGVNLPVDGGLAATY  234 (241)
T ss_pred             hcCccCcEEEecCchHHHh
Confidence            9999999999999986544

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=100.00  E-value=3.4e-32  Score=227.31  Aligned_cols=190  Identities=27%  Similarity=0.363  Sum_probs=172.1

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhc-CCeEEEEEccCCCHHH-HHHHHHHHHHHcC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK-GLKVTGSVCDVSSRPQ-RQTLINTVSSLFN   96 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~-~~~~~~~i~~~~~   96 (270)
                      .|++++||||+.|||++.|++||++|.+|+|++|++++++.+.+++.+. +.+++++.+|.++.+. .+++.+.+..   
T Consensus        48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~---  124 (312)
T KOG1014|consen   48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAG---  124 (312)
T ss_pred             cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcC---
Confidence            3589999999999999999999999999999999999999999999876 5689999999998776 3333333322   


Q ss_pred             CcccEEEECCCCCC--CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           97 GKLNIFVNNVGTSV--LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        97 ~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                      .++.+||||+|...  +..+.+.+.+.+++.+.+|+.+.+.+++.++|.|.++++|.|+|++|.++..+.|.++.|+++|
T Consensus       125 ~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~ysasK  204 (312)
T KOG1014|consen  125 LDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVYSASK  204 (312)
T ss_pred             CceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHHHHHH
Confidence            47999999999976  5567788888999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccc
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPL  211 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~  211 (270)
                      +.++.|+++|+.|+..+||.|.++.|..|.|+|.+.-
T Consensus       205 ~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~  241 (312)
T KOG1014|consen  205 AFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKYR  241 (312)
T ss_pred             HHHHHHHHHHHHHHHhcCeEEEEeehhheeccccccC
Confidence            9999999999999999999999999999999988654

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=100.00  E-value=4.8e-31  Score=210.29  Aligned_cols=225  Identities=22%  Similarity=0.273  Sum_probs=179.2

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHC-CCeEEEe-eCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSML-GATVHTC-SRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~-G~~v~l~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      ..|.|+||||.+|||..++++|.+. |-++++. .|+++...+..+.......+++++++|+++.+++..+++++.+..+
T Consensus         2 spksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg   81 (249)
T KOG1611|consen    2 SPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVG   81 (249)
T ss_pred             CCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcc
Confidence            3567999999999999999999977 4555554 5556664222222222357899999999999999999999999853


Q ss_pred             -CcccEEEECCCCCC-CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----------CcEEEEecCcccccc
Q 024230           97 -GKLNIFVNNVGTSV-LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-----------AASIVLMSSALGIVS  163 (270)
Q Consensus        97 -~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-----------~g~ii~iss~~~~~~  163 (270)
                       ..+++||||||+.. .....+-+.+.|.+.+++|+.|+++++|+|+|++++..           +..|||+||.++..+
T Consensus        82 ~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~  161 (249)
T KOG1611|consen   82 SDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIG  161 (249)
T ss_pred             cCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccC
Confidence             57999999999864 44556677889999999999999999999999998653           247999999887654


Q ss_pred             C---CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHH
Q 024230          164 A---NVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLV  240 (270)
Q Consensus       164 ~---~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  240 (270)
                      .   ....+|.+||+|+++|+|+++-||.+.+|-|.++|||||.|+|...-                 ...++|+-+..+
T Consensus       162 ~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~~-----------------a~ltveeSts~l  224 (249)
T KOG1611|consen  162 GFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGKK-----------------AALTVEESTSKL  224 (249)
T ss_pred             CCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCCC-----------------cccchhhhHHHH
Confidence            3   34578999999999999999999999999999999999999998632                 133566666666


Q ss_pred             HHHhCCCCCCccCcEEeecC
Q 024230          241 AFLCMPAASYITGQTVCIDG  260 (270)
Q Consensus       241 ~~l~s~~~~~~~G~~i~vdg  260 (270)
                      +.....-...-+|..++-|+
T Consensus       225 ~~~i~kL~~~hnG~ffn~dl  244 (249)
T KOG1611|consen  225 LASINKLKNEHNGGFFNRDG  244 (249)
T ss_pred             HHHHHhcCcccCcceEccCC
Confidence            66665555666888888776

>PRK08264 short chain dehydrogenase; Validated

Probab=100.00  E-value=9.4e-31  Score=219.28  Aligned_cols=205  Identities=27%  Similarity=0.319  Sum_probs=179.6

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      +|++++|+++||||+|+||+++|++|+++|+ +|++++|+.++.++       .+.++.++.+|+++.++++++++..  
T Consensus         1 ~~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~~--   71 (238)
T PRK08264          1 MMDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-------LGPRVVPLQLDVTDPASVAAAAEAA--   71 (238)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-------cCCceEEEEecCCCHHHHHHHHHhc--
Confidence            3678999999999999999999999999999 99999998776543       3457889999999999988877653  


Q ss_pred             HcCCcccEEEECCCC-CCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhh
Q 024230           94 LFNGKLNIFVNNVGT-SVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSA  172 (270)
Q Consensus        94 ~~~~~id~li~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~  172 (270)
                         +++|++||++|. ....++.+.+.+++++.+++|+.+++.+++++.|.|.+.+.+++|++||..+..+.++...|+.
T Consensus        72 ---~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~  148 (238)
T PRK08264         72 ---SDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSA  148 (238)
T ss_pred             ---CCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCCchHhHH
Confidence               689999999998 5667788899999999999999999999999999998887889999999999998888999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCC
Q 024230          173 TKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP  246 (270)
Q Consensus       173 sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (270)
                      +|++++++++.++.++.+.|++++.+.||.++|++.....               ....+++++++.++.....
T Consensus       149 sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~~~---------------~~~~~~~~~a~~~~~~~~~  207 (238)
T PRK08264        149 SKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGLD---------------APKASPADVARQILDALEA  207 (238)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccccCC---------------cCCCCHHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999998764431               1145678888888877754

>PRK09291 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-30  Score=221.01  Aligned_cols=219  Identities=20%  Similarity=0.263  Sum_probs=183.3

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      +|++||||++|+||++++++|+++|++|++++|+++..+++.+.+...+.++.++.+|++|++++.++++       +++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~i   74 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE-------WDV   74 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc-------CCC
Confidence            6899999999999999999999999999999999888777776666666678899999999988877652       489


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHHHH
Q 024230          100 NIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQ  179 (270)
Q Consensus       100 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal~~  179 (270)
                      |++|||||....+++.+.+.+++++.+++|+.+++.+++.+++.|.+.+.++||++||..+..+.++...|++||++++.
T Consensus        75 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~Y~~sK~a~~~  154 (257)
T PRK09291         75 DVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEA  154 (257)
T ss_pred             CEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCCcchhHHHHHHHHH
Confidence            99999999988888889999999999999999999999999999988877899999999998888888999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEecCcccCCCCccccCC-------h-hhHHHHhhcCCCCCCCChHhHHHHHHHHhCC
Q 024230          180 LAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN-------G-KFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP  246 (270)
Q Consensus       180 ~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (270)
                      ++++++.++.+.||+++.|.||++.|++.......       . ..........+. ...+++|++..+..++..
T Consensus       155 ~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~  228 (257)
T PRK09291        155 IAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFPL-EQFDPQEMIDAMVEVIPA  228 (257)
T ss_pred             HHHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhccc-cCCCHHHHHHHHHHHhcC
Confidence            99999999999999999999999999875432211       0 001100111122 235789998888887753

>PRK08017 oxidoreductase; Provisional

Probab=100.00  E-value=1.5e-30  Score=220.35  Aligned_cols=224  Identities=23%  Similarity=0.274  Sum_probs=185.9

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      .|+++|||++|+||.++++.|+++|++|++++|+.+..+...    ..  .+..+.+|+++.++++++++.+....++++
T Consensus         2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~----~~--~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~   75 (256)
T PRK08017          2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN----SL--GFTGILLDLDDPESVERAADEVIALTDNRL   75 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH----hC--CCeEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence            378999999999999999999999999999999987765432    22  366789999999999999999877654689


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHHHH
Q 024230          100 NIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQ  179 (270)
Q Consensus       100 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal~~  179 (270)
                      |.+||++|.....++.+.+.+++++.+++|+.|++.+++.++|.|.+.+.++||++||..+..+.+....|+++|++++.
T Consensus        76 ~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~~~~~  155 (256)
T PRK08017         76 YGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEA  155 (256)
T ss_pred             eEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCCccHHHHHHHHHHH
Confidence            99999999877777888999999999999999999999999999988878899999999998888889999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCC
Q 024230          180 LAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAAS  249 (270)
Q Consensus       180 ~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  249 (270)
                      ++++++.++.+.+++++.+.||+++|++........................+++|+++.+..+++....
T Consensus       156 ~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~  225 (256)
T PRK08017        156 WSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVPKLRHALESPKP  225 (256)
T ss_pred             HHHHHHHHHhhcCCEEEEEeCCCcccchhhcccchhhccchhhhHHHhhcCCCHHHHHHHHHHHHhCCCC
Confidence            9999999999999999999999999987655432110000000000012347899999999999976543

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.2e-29  Score=213.66  Aligned_cols=196  Identities=16%  Similarity=0.142  Sum_probs=152.0

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      ..++||+++||||++|||+++|++|+++|++|++++|++....+.   .. .+ ....+.+|+++.+++++.       +
T Consensus        10 ~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~---~~-~~-~~~~~~~D~~~~~~~~~~-------~   77 (245)
T PRK12367         10 STWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSES---ND-ES-PNEWIKWECGKEESLDKQ-------L   77 (245)
T ss_pred             HhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhh---hc-cC-CCeEEEeeCCCHHHHHHh-------c
Confidence            567899999999999999999999999999999999987322111   11 11 235678999999876643       3


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc---CCcEEEEecCccccccCCCChhhhh
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRAS---GAASIVLMSSALGIVSANVGTVYSA  172 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~---~~g~ii~iss~~~~~~~~~~~~y~~  172 (270)
                       +++|++|||||...   ..+.+.++|++++++|+.+++.++++++|.|.++   +++.+++.+|.++..+ ++...|++
T Consensus        78 -~~iDilVnnAG~~~---~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~-~~~~~Y~a  152 (245)
T PRK12367         78 -ASLDVLILNHGINP---GGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP-ALSPSYEI  152 (245)
T ss_pred             -CCCCEEEECCccCC---cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC-CCCchhHH
Confidence             68999999999753   3456899999999999999999999999999763   2334545556555544 46678999


Q ss_pred             hHHHHHHHH---HHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCC
Q 024230          173 TKGAMNQLA---KNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP  246 (270)
Q Consensus       173 sKaal~~~~---~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (270)
                      ||+|+..+.   +.++.|+.+.+++|+.++||+++|++..                  ....+|+|+|+.+++.+..
T Consensus       153 SKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~~------------------~~~~~~~~vA~~i~~~~~~  211 (245)
T PRK12367        153 SKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELNP------------------IGIMSADFVAKQILDQANL  211 (245)
T ss_pred             HHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccCc------------------cCCCCHHHHHHHHHHHHhc
Confidence            999986544   4455556788999999999999998631                  1246899999999999964

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1e-29  Score=211.50  Aligned_cols=181  Identities=22%  Similarity=0.319  Sum_probs=155.6

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      |+++|||++++||++++++|+++|++|++++|+++..+.+.. +    .++.+..+|++|+++++++++++.+   +++|
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-~----~~~~~~~~D~~d~~~~~~~~~~~~~---~~id   73 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA-L----PGVHIEKLDMNDPASLDQLLQRLQG---QRFD   73 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh-c----cccceEEcCCCCHHHHHHHHHHhhc---CCCC
Confidence            789999999999999999999999999999999876554322 1    2567788999999999999988743   5799


Q ss_pred             EEEECCCCCC--CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC---CCChhhhhhHH
Q 024230          101 IFVNNVGTSV--LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA---NVGTVYSATKG  175 (270)
Q Consensus       101 ~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~---~~~~~y~~sKa  175 (270)
                      ++|||+|...  ..++.+.+.+++++.+++|+.+++.+++++.|+|++. .+.+++++|..+..+.   .....|+++|+
T Consensus        74 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK~  152 (225)
T PRK08177         74 LLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG-QGVLAFMSSQLGSVELPDGGEMPLYKASKA  152 (225)
T ss_pred             EEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc-CCEEEEEccCccccccCCCCCccchHHHHH
Confidence            9999999864  3456788999999999999999999999999998754 4789999997765432   35678999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEecCcccCCCCcc
Q 024230          176 AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEP  210 (270)
Q Consensus       176 al~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~  210 (270)
                      +++.|+++++.|++++||+|++|+||+++|++...
T Consensus       153 a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~~  187 (225)
T PRK08177        153 ALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGGD  187 (225)
T ss_pred             HHHHHHHHHHHHhhcCCeEEEEEcCCceecCCCCC
Confidence            99999999999999999999999999999998644

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=1.4e-29  Score=211.32  Aligned_cols=220  Identities=22%  Similarity=0.208  Sum_probs=191.6

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcC--CeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG--LKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      +.++|||+|+|||+++|.++..+|++|.++.|+.+++++++++++-..  .++.+..+|+.|-+++...++++++.+ ++
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~-~~  112 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLE-GP  112 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhcc-CC
Confidence            689999999999999999999999999999999999999998887542  337799999999999999999999887 89


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCccccccCCCChhhhhhHHHH
Q 024230           99 LNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIVSANVGTVYSATKGAM  177 (270)
Q Consensus        99 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~~~~~~~~~~~y~~sKaal  177 (270)
                      +|.+|||||..-.+-+.+.+++.++..+++|+.+.++++++.+|.|++.. .|+|+.++|..|..+..++++|+++|+|+
T Consensus       113 ~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK~al  192 (331)
T KOG1210|consen  113 IDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSKFAL  192 (331)
T ss_pred             cceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHHHHH
Confidence            99999999999999999999999999999999999999999999999876 68999999999999999999999999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEecCcccCCCCccccC-ChhhHHHHhhcCCCCCCCChHhHHHHHHHHh
Q 024230          178 NQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG-NGKFVDEVKSRTPMGRLGEPKEVSSLVAFLC  244 (270)
Q Consensus       178 ~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  244 (270)
                      .+|+..+++|+.++||+|..+.|+.+.||....-.. .+.....+.   -.....++|+++.+++--+
T Consensus       193 rgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~tkP~~t~ii~---g~ss~~~~e~~a~~~~~~~  257 (331)
T KOG1210|consen  193 RGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKTKPEETKIIE---GGSSVIKCEEMAKAIVKGM  257 (331)
T ss_pred             HHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccccCchheeeec---CCCCCcCHHHHHHHHHhHH
Confidence            999999999999999999999999999984433211 111111111   1123467899999987555

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.9e-28  Score=203.41  Aligned_cols=213  Identities=21%  Similarity=0.249  Sum_probs=176.2

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      |+++|||++++||++++++|+++|++|++++|+++..+++.    ..  .+.++.+|+++.++++++++++..   +++|
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~----~~--~~~~~~~D~~~~~~v~~~~~~~~~---~~~d   72 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQ----AL--GAEALALDVADPASVAGLAWKLDG---EALD   72 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHH----hc--cceEEEecCCCHHHHHHHHHHhcC---CCCC
Confidence            68999999999999999999999999999999987665432    22  245789999999999988776532   4799


Q ss_pred             EEEECCCCCC--CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCC---hhhhhhHH
Q 024230          101 IFVNNVGTSV--LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG---TVYSATKG  175 (270)
Q Consensus       101 ~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~---~~y~~sKa  175 (270)
                      ++|||+|...  ..+..+.+.+++++.+++|+.+++.+++++.|+|.+. .+++++++|..+..+....   ..|+++|+
T Consensus        73 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~~Y~~sK~  151 (222)
T PRK06953         73 AAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAA-GGVLAVLSSRMGSIGDATGTTGWLYRASKA  151 (222)
T ss_pred             EEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc-CCeEEEEcCcccccccccCCCccccHHhHH
Confidence            9999999863  3456677999999999999999999999999998664 5899999998776653322   35999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcE
Q 024230          176 AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT  255 (270)
Q Consensus       176 al~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  255 (270)
                      +++++++.++.++  .+++++.|+||+++|++...                 .....+++.+..+..+........+|..
T Consensus       152 a~~~~~~~~~~~~--~~i~v~~v~Pg~i~t~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (222)
T PRK06953        152 ALNDALRAASLQA--RHATCIALHPGWVRTDMGGA-----------------QAALDPAQSVAGMRRVIAQATRRDNGRF  212 (222)
T ss_pred             HHHHHHHHHhhhc--cCcEEEEECCCeeecCCCCC-----------------CCCCCHHHHHHHHHHHHHhcCcccCceE
Confidence            9999999999886  37999999999999997642                 1124688888888888777678889999


Q ss_pred             EeecCCc
Q 024230          256 VCIDGGF  262 (270)
Q Consensus       256 i~vdgG~  262 (270)
                      +..|++.
T Consensus       213 ~~~~~~~  219 (222)
T PRK06953        213 FQYDGVE  219 (222)
T ss_pred             EeeCCcC
Confidence            9988774

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.3e-28  Score=202.11  Aligned_cols=219  Identities=25%  Similarity=0.326  Sum_probs=181.1

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      .|+++||||+|+||++++++|+++ ++|++++|+.+..++..+..    ..+.++.+|++|+++++++++++     +++
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~-----~~i   72 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL----PGATPFPVDLTDPEAIAAAVEQL-----GRL   72 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh----ccceEEecCCCCHHHHHHHHHhc-----CCC
Confidence            589999999999999999999999 99999999987765544332    24778899999999988887653     589


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHHHH
Q 024230          100 NIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQ  179 (270)
Q Consensus       100 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal~~  179 (270)
                      |++||++|.....++.+.+.+++.+++++|+.+++.+++.+++.|++. .+++|++||..+..+.++...|+.+|++++.
T Consensus        73 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~~~~~~y~~~K~a~~~  151 (227)
T PRK08219         73 DVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA-HGHVVFINSGAGLRANPGWGSYAASKFALRA  151 (227)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEcchHhcCcCCCCchHHHHHHHHHH
Confidence            999999999777777888999999999999999999999999998776 4799999999999888889999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEEeec
Q 024230          180 LAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCID  259 (270)
Q Consensus       180 ~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vd  259 (270)
                      +++.++.++... ++++.+.||++++++........      ....+..++.+++|++++++++++..   ..|.+..+.
T Consensus       152 ~~~~~~~~~~~~-i~~~~i~pg~~~~~~~~~~~~~~------~~~~~~~~~~~~~dva~~~~~~l~~~---~~~~~~~~~  221 (227)
T PRK08219        152 LADALREEEPGN-VRVTSVHPGRTDTDMQRGLVAQE------GGEYDPERYLRPETVAKAVRFAVDAP---PDAHITEVV  221 (227)
T ss_pred             HHHHHHHHhcCC-ceEEEEecCCccchHhhhhhhhh------ccccCCCCCCCHHHHHHHHHHHHcCC---CCCccceEE
Confidence            999999988766 99999999999887654332110      11123356789999999999999653   245555544

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=3.1e-30  Score=205.65  Aligned_cols=238  Identities=19%  Similarity=0.150  Sum_probs=191.4

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      ..+|++|+||+|.|||..++..+..++-......+++...+ ........++.......|++...-+.++++..+... +
T Consensus         4 ~~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~-~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~-g   81 (253)
T KOG1204|consen    4 NMRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE-LEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKG-G   81 (253)
T ss_pred             ccceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc-ccceEEEecCCcceechHHHHHHHHHHHHhhhhhcC-C
Confidence            45788999999999999999988888876554444433322 111111234455667788888888888888888876 7


Q ss_pred             cccEEEECCCCCCC-CCC--CCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCccccccCCCChhhhhh
Q 024230           98 KLNIFVNNVGTSVL-KPT--LEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        98 ~id~li~~ag~~~~-~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                      +.|++|||||...+ ...  +.-+.++|++.|+.|+++++.+.+.++|.+++.. .+.+||+||.++..+.++++.||++
T Consensus        82 kr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~wa~yc~~  161 (253)
T KOG1204|consen   82 KRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSWAAYCSS  161 (253)
T ss_pred             ceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHHHHhhhh
Confidence            99999999998643 222  3678889999999999999999999999998873 6899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC----hhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCC
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN----GKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAAS  249 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  249 (270)
                      |+|.++|.+.+|.|-. ++|+|.+++||+++|.|...+...    +.....++.....+++.+|...++.+..|+-... 
T Consensus       162 KaAr~m~f~~lA~EEp-~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~~~ll~~~~~a~~l~~L~e~~~-  239 (253)
T KOG1204|consen  162 KAARNMYFMVLASEEP-FDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKESGQLLDPQVTAKVLAKLLEKGD-  239 (253)
T ss_pred             HHHHHHHHHHHhhcCc-cceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhcCCcCChhhHHHHHHHHHHhcC-
Confidence            9999999999999965 899999999999999998766543    3455556666677889999999999999995433 


Q ss_pred             CccCcEEeec
Q 024230          250 YITGQTVCID  259 (270)
Q Consensus       250 ~~~G~~i~vd  259 (270)
                      +++|+++...
T Consensus       240 f~sG~~vdy~  249 (253)
T KOG1204|consen  240 FVSGQHVDYY  249 (253)
T ss_pred             cccccccccc
Confidence            8999987643

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.96  E-value=5.5e-27  Score=208.98  Aligned_cols=199  Identities=21%  Similarity=0.188  Sum_probs=155.5

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      ..++++||+++||||+||||++++++|+++|++|++++|++++++..   +......+..+.+|++|++++.+.+     
T Consensus       172 ta~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~---~~~~~~~v~~v~~Dvsd~~~v~~~l-----  243 (406)
T PRK07424        172 TALSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLE---INGEDLPVKTLHWQVGQEAALAELL-----  243 (406)
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HhhcCCCeEEEEeeCCCHHHHHHHh-----
Confidence            34678999999999999999999999999999999999987765432   2222335677899999998876544     


Q ss_pred             HcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC----cEEEEecCccccccCCCChh
Q 024230           94 LFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGA----ASIVLMSSALGIVSANVGTV  169 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~----g~ii~iss~~~~~~~~~~~~  169 (270)
                         +++|++|||||....   .+.+.+++++++++|+.+++.++++++|.|++++.    +.+|++|+ ++ ...+..+.
T Consensus       244 ---~~IDiLInnAGi~~~---~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~-~~~~~~~~  315 (406)
T PRK07424        244 ---EKVDILIINHGINVH---GERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AE-VNPAFSPL  315 (406)
T ss_pred             ---CCCCEEEECCCcCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-cc-ccCCCchH
Confidence               689999999997543   36789999999999999999999999999987642    34555554 33 33345678


Q ss_pred             hhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCC
Q 024230          170 YSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAAS  249 (270)
Q Consensus       170 y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  249 (270)
                      |++||+|+++|++ +.++.  .++.+..+.||+++|++..                  ....+||++|+.++++++...+
T Consensus       316 Y~ASKaAl~~l~~-l~~~~--~~~~I~~i~~gp~~t~~~~------------------~~~~spe~vA~~il~~i~~~~~  374 (406)
T PRK07424        316 YELSKRALGDLVT-LRRLD--APCVVRKLILGPFKSNLNP------------------IGVMSADWVAKQILKLAKRDFR  374 (406)
T ss_pred             HHHHHHHHHHHHH-HHHhC--CCCceEEEEeCCCcCCCCc------------------CCCCCHHHHHHHHHHHHHCCCC
Confidence            9999999999985 44443  4577778899999987631                  0145899999999999976544

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.94  E-value=1.7e-25  Score=232.65  Aligned_cols=183  Identities=17%  Similarity=0.185  Sum_probs=161.3

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHC-CCeEEEeeCCh-------------------------------------------
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSML-GATVHTCSRTE-------------------------------------------   54 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~-G~~v~l~~r~~-------------------------------------------   54 (270)
                      +||++|||||++|||.++|++|+++ |++|++++|+.                                           
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            5899999999999999999999998 69999999982                                           


Q ss_pred             ----hHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhh
Q 024230           55 ----TELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNF  130 (270)
Q Consensus        55 ----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~  130 (270)
                          .+..+..+.+...|.++.++.+|++|.++++++++++.+.  +++|+||||||+...+.+.+.+.++|++++++|+
T Consensus      2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~--g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv 2153 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKT--LQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKV 2153 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh--CCCcEEEECCccCCCCCcccCCHHHHHHHHHHHH
Confidence                1112233445556788999999999999999999999876  5799999999998888899999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCc
Q 024230          131 ESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTE  209 (270)
Q Consensus       131 ~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~  209 (270)
                      .|.+++++++.+.+    .++||++||..+..+.+++..|+++|++++.+++.++.++.  +++|++|.||+++|.|..
T Consensus      2154 ~G~~~Ll~al~~~~----~~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~--~irV~sI~wG~wdtgm~~ 2226 (2582)
T TIGR02813      2154 DGLLSLLAALNAEN----IKLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNP--SAKVMSFNWGPWDGGMVN 2226 (2582)
T ss_pred             HHHHHHHHHHHHhC----CCeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcC--CcEEEEEECCeecCCccc
Confidence            99999999986644    34799999999999999999999999999999999999874  499999999999998863

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.93  E-value=2.2e-24  Score=171.59  Aligned_cols=175  Identities=23%  Similarity=0.308  Sum_probs=151.1

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHH---HHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNEC---IHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~---~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      |+++|||++++||.+++++|+++|+ .|++++|+++..+..   .++++..+.++.++.+|++++++++++++++...+ 
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   79 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARL-   79 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            6899999999999999999999997 688888876544322   34555567788899999999999999999998887 


Q ss_pred             CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHH
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGA  176 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaa  176 (270)
                      +++|.+||++|.....++.+.+.+++++++++|+.+++.+.+++.    +.+.+++++++|..+..+.++...|+++|++
T Consensus        80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~~  155 (180)
T smart00822       80 GPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTR----DLPLDFFVLFSSVAGVLGNPGQANYAAANAF  155 (180)
T ss_pred             CCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhc----cCCcceEEEEccHHHhcCCCCchhhHHHHHH
Confidence            799999999998777777889999999999999999999999883    3455799999999999898999999999999


Q ss_pred             HHHHHHHHHHHHccCCceEEEEecCccc
Q 024230          177 MNQLAKNLACEWAKDNIRTNSVAPWYIR  204 (270)
Q Consensus       177 l~~~~~sla~el~~~~i~v~~v~pG~v~  204 (270)
                      ++.+++.++    +.++++..+.||+++
T Consensus       156 ~~~~~~~~~----~~~~~~~~~~~g~~~  179 (180)
T smart00822      156 LDALAAHRR----ARGLPATSINWGAWA  179 (180)
T ss_pred             HHHHHHHHH----hcCCceEEEeecccc
Confidence            999997764    458889999999875

It uses NADPH to reduce the keto group to a hydroxy group.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.92  E-value=1.6e-23  Score=191.39  Aligned_cols=222  Identities=16%  Similarity=0.138  Sum_probs=165.9

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhc-----C----CeEEEEEccCCCHHHHHHH
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK-----G----LKVTGSVCDVSSRPQRQTL   87 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~-----~----~~~~~~~~D~~~~~~~~~~   87 (270)
                      ..+||+|+||||+|+||++++++|+++|++|++++|+.+.++.+..++...     +    .++.++.+|++|.+++.+.
T Consensus        77 ~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a  156 (576)
T PLN03209         77 TKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA  156 (576)
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH
Confidence            457899999999999999999999999999999999998887776655431     1    3588899999999887664


Q ss_pred             HHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccc-ccCCC
Q 024230           88 INTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGI-VSANV  166 (270)
Q Consensus        88 ~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~-~~~~~  166 (270)
                      +        +.+|+||||+|....      ...++...+.+|+.+..++++++.    +.+.++||++||.++. .+.+.
T Consensus       157 L--------ggiDiVVn~AG~~~~------~v~d~~~~~~VN~~Gt~nLl~Aa~----~agVgRIV~VSSiga~~~g~p~  218 (576)
T PLN03209        157 L--------GNASVVICCIGASEK------EVFDVTGPYRIDYLATKNLVDAAT----VAKVNHFILVTSLGTNKVGFPA  218 (576)
T ss_pred             h--------cCCCEEEEccccccc------cccchhhHHHHHHHHHHHHHHHHH----HhCCCEEEEEccchhcccCccc
Confidence            4        689999999987532      122467789999999999988884    3456899999998764 22222


Q ss_pred             ChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCC
Q 024230          167 GTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP  246 (270)
Q Consensus       167 ~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (270)
                       ..|. +|+++..+.+.+..++...||+++.|+||++.+++..... .... .......+.++..+.+|||+.++|++++
T Consensus       219 -~~~~-sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~~-t~~v-~~~~~d~~~gr~isreDVA~vVvfLasd  294 (576)
T PLN03209        219 -AILN-LFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDAYKE-THNL-TLSEEDTLFGGQVSNLQVAELMACMAKN  294 (576)
T ss_pred             -cchh-hHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCcccccc-ccce-eeccccccCCCccCHHHHHHHHHHHHcC
Confidence             2244 7888888999999999999999999999999887543211 1111 1111224567788999999999999985


Q ss_pred             CCCCccCcEEeecCC
Q 024230          247 AASYITGQTVCIDGG  261 (270)
Q Consensus       247 ~~~~~~G~~i~vdgG  261 (270)
                      .. .-.++++.+=.|
T Consensus       295 ~~-as~~kvvevi~~  308 (576)
T PLN03209        295 RR-LSYCKVVEVIAE  308 (576)
T ss_pred             ch-hccceEEEEEeC
Confidence            42 123555555444

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.92  E-value=1.6e-23  Score=168.56  Aligned_cols=174  Identities=20%  Similarity=0.306  Sum_probs=140.5

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCCh---hHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTE---TELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      ++|||||.|+||..++++|+++|+ +|++++|+.   ...++..++++..+.++.++.+|++|+++++++++++...+ +
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~-~   80 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRF-G   80 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTS-S
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhcc-C
Confidence            799999999999999999999986 799999993   24557788888889999999999999999999999999888 8


Q ss_pred             cccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHH
Q 024230           98 KLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAM  177 (270)
Q Consensus        98 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal  177 (270)
                      +++.+||+||...+.++.+.+++++++++...+.+..++.+.+.    ......+|++||+.+..+.+++..|+++.+.+
T Consensus        81 ~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~----~~~l~~~i~~SSis~~~G~~gq~~YaaAN~~l  156 (181)
T PF08659_consen   81 PIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALE----NRPLDFFILFSSISSLLGGPGQSAYAAANAFL  156 (181)
T ss_dssp             -EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHT----TTTTSEEEEEEEHHHHTT-TTBHHHHHHHHHH
T ss_pred             CcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhh----cCCCCeEEEECChhHhccCcchHhHHHHHHHH
Confidence            99999999999999999999999999999999999999999884    35567999999999999999999999999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEecCccc
Q 024230          178 NQLAKNLACEWAKDNIRTNSVAPWYIR  204 (270)
Q Consensus       178 ~~~~~sla~el~~~~i~v~~v~pG~v~  204 (270)
                      +.|++....    .|.++.+|..|+.+
T Consensus       157 da~a~~~~~----~g~~~~sI~wg~W~  179 (181)
T PF08659_consen  157 DALARQRRS----RGLPAVSINWGAWD  179 (181)
T ss_dssp             HHHHHHHHH----TTSEEEEEEE-EBS
T ss_pred             HHHHHHHHh----CCCCEEEEEccccC
Confidence            999887543    47888888877543

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.92  E-value=8.2e-23  Score=179.07  Aligned_cols=216  Identities=18%  Similarity=0.125  Sum_probs=159.8

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCC--CeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLG--ATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G--~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      ++||+||||||+|+||++++++|+++|  ++|++++|+......+...+.  ..++.++.+|++|.+++.+++       
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~l~~~~-------   72 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFP--APCLRFFIGDVRDKERLTRAL-------   72 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhC--CCcEEEEEccCCCHHHHHHHH-------
Confidence            578999999999999999999999997  789999988765544433332  246888999999999888776       


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKG  175 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKa  175 (270)
                       ..+|++||+||.... +..+.++   .+.+++|+.++.++++++.+    .+.++||++||.....+   ...|++||+
T Consensus        73 -~~iD~Vih~Ag~~~~-~~~~~~~---~~~~~~Nv~g~~~ll~aa~~----~~~~~iV~~SS~~~~~p---~~~Y~~sK~  140 (324)
T TIGR03589        73 -RGVDYVVHAAALKQV-PAAEYNP---FECIRTNINGAQNVIDAAID----NGVKRVVALSTDKAANP---INLYGATKL  140 (324)
T ss_pred             -hcCCEEEECcccCCC-chhhcCH---HHHHHHHHHHHHHHHHHHHH----cCCCEEEEEeCCCCCCC---CCHHHHHHH
Confidence             358999999997532 3333343   46899999999999999854    44579999999765433   457999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhc---CC------CCCCCChHhHHHHHHHHhCC
Q 024230          176 AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSR---TP------MGRLGEPKEVSSLVAFLCMP  246 (270)
Q Consensus       176 al~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~---~~------~~~~~~~~dva~~~~~l~s~  246 (270)
                      +.+.++++++.+....|++++++.||.+..+... +  .+.+.......   .+      .+.+..++|++++++..+..
T Consensus       141 ~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~-~--i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~~  217 (324)
T TIGR03589       141 ASDKLFVAANNISGSKGTRFSVVRYGNVVGSRGS-V--VPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLER  217 (324)
T ss_pred             HHHHHHHHHHhhccccCcEEEEEeecceeCCCCC-c--HHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHhh
Confidence            9999999998888888999999999999986321 1  11222222111   11      12356899999999888853


Q ss_pred             CCCCccCcEEeecCC
Q 024230          247 AASYITGQTVCIDGG  261 (270)
Q Consensus       247 ~~~~~~G~~i~vdgG  261 (270)
                      .   ..|+++ +..|
T Consensus       218 ~---~~~~~~-~~~~  228 (324)
T TIGR03589       218 M---LGGEIF-VPKI  228 (324)
T ss_pred             C---CCCCEE-ccCC
Confidence            2   246665 4444

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.90  E-value=9.6e-22  Score=174.02  Aligned_cols=230  Identities=15%  Similarity=0.032  Sum_probs=164.9

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      ++||+||||||+|+||.++++.|+++|++|++++|+++........+. .+.++.++.+|+++.+++.+++++      .
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~------~   74 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLN-LAKKIEDHFGDIRDAAKLRKAIAE------F   74 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHh-hcCCceEEEccCCCHHHHHHHHhh------c
Confidence            578999999999999999999999999999999998765444333332 233577789999999998888875      3


Q ss_pred             cccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccccc------------CC
Q 024230           98 KLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVS------------AN  165 (270)
Q Consensus        98 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~------------~~  165 (270)
                      ++|++||+|+....    ..+.+++...+++|+.+++++++++.+   ....+++|++||...+..            ..
T Consensus        75 ~~d~vih~A~~~~~----~~~~~~~~~~~~~N~~g~~~ll~a~~~---~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~  147 (349)
T TIGR02622        75 KPEIVFHLAAQPLV----RKSYADPLETFETNVMGTVNLLEAIRA---IGSVKAVVNVTSDKCYRNDEWVWGYRETDPLG  147 (349)
T ss_pred             CCCEEEECCccccc----ccchhCHHHHHHHhHHHHHHHHHHHHh---cCCCCEEEEEechhhhCCCCCCCCCccCCCCC
Confidence            68999999996322    334566778899999999999998742   122468999999754421            12


Q ss_pred             CChhhhhhHHHHHHHHHHHHHHHcc----CCceEEEEecCcccCCCCccccC-ChhhHHHHhhc--------CCCCCCCC
Q 024230          166 VGTVYSATKGAMNQLAKNLACEWAK----DNIRTNSVAPWYIRTPFTEPLLG-NGKFVDEVKSR--------TPMGRLGE  232 (270)
Q Consensus       166 ~~~~y~~sKaal~~~~~sla~el~~----~~i~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~--------~~~~~~~~  232 (270)
                      ....|+.||.+.+.+++.++.++.+    ++++++.+.|+.+..+-...... .+.........        ...+.+..
T Consensus       148 p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~rd~i~  227 (349)
T TIGR02622       148 GHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDATRPWQH  227 (349)
T ss_pred             CCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECCCCcccceee
Confidence            3467999999999999999988755    48999999999998864211000 12222222211        11233456


Q ss_pred             hHhHHHHHHHHhCCC--CCCccCcEEeecCC
Q 024230          233 PKEVSSLVAFLCMPA--ASYITGQTVCIDGG  261 (270)
Q Consensus       233 ~~dva~~~~~l~s~~--~~~~~G~~i~vdgG  261 (270)
                      .+|++++++.++...  .....|+.+++.+|
T Consensus       228 v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~  258 (349)
T TIGR02622       228 VLEPLSGYLLLAEKLFTGQAEFAGAWNFGPR  258 (349)
T ss_pred             HHHHHHHHHHHHHHHhhcCccccceeeeCCC
Confidence            899999998776421  11123679999765

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.90  E-value=1.6e-21  Score=170.17  Aligned_cols=198  Identities=14%  Similarity=0.048  Sum_probs=152.5

Q ss_pred             CCCCEEEEecCCCcHHHH--HHHHHHHCCCeEEEeeCChhHH------------HHHHHHHHhcCCeEEEEEccCCCHHH
Q 024230           18 LQGMTALVTGGTKGLGLA--VVEELSMLGATVHTCSRTETEL------------NECIHHLQMKGLKVTGSVCDVSSRPQ   83 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~--la~~l~~~G~~v~l~~r~~~~~------------~~~~~~~~~~~~~~~~~~~D~~~~~~   83 (270)
                      --||++||||+++|||.+  +|+.| ++|++|+++++..+..            +.+.+.+...+..+..+.+|++++++
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~  117 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI  117 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            457999999999999999  89999 9999988888543221            23445555556678889999999999


Q ss_pred             HHHHHHHHHHHcCCcccEEEECCCCCCCCC-----------------C-----------------CCCCHHHHHHHHHHh
Q 024230           84 RQTLINTVSSLFNGKLNIFVNNVGTSVLKP-----------------T-----------------LEYNAEDFSLVMSTN  129 (270)
Q Consensus        84 ~~~~~~~i~~~~~~~id~li~~ag~~~~~~-----------------~-----------------~~~~~~~~~~~~~~n  129 (270)
                      ++++++++.+.+ |++|+||||+|......                 +                 ...+.++++.++.+.
T Consensus       118 v~~lie~I~e~~-G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv~vM  196 (398)
T PRK13656        118 KQKVIELIKQDL-GQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTVKVM  196 (398)
T ss_pred             HHHHHHHHHHhc-CCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHHHhh
Confidence            999999999999 89999999999863211                 1                 124556666555444


Q ss_pred             hH-HHHHHH--HHHHHHHHhcCCcEEEEecCccccccCCCC--hhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCccc
Q 024230          130 FE-SAFHLC--QLAHPLLRASGAASIVLMSSALGIVSANVG--TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIR  204 (270)
Q Consensus       130 ~~-~~~~l~--~~~~~~m~~~~~g~ii~iss~~~~~~~~~~--~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~  204 (270)
                      =. .-...+  ....+.|.  .++++|-.|+..+....|.+  ...+.+|++|+.-+|.|+.+|++.|+|+|++.+|++.
T Consensus       197 ggedw~~Wi~al~~a~lla--~g~~~va~TY~G~~~t~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~giran~i~~g~~~  274 (398)
T PRK13656        197 GGEDWELWIDALDEAGVLA--EGAKTVAYSYIGPELTHPIYWDGTIGKAKKDLDRTALALNEKLAAKGGDAYVSVLKAVV  274 (398)
T ss_pred             ccchHHHHHHHHHhccccc--CCcEEEEEecCCcceeecccCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCccc
Confidence            33 112333  33344453  35899999999888877777  4889999999999999999999999999999999999


Q ss_pred             CCCCccccCChhhHH
Q 024230          205 TPFTEPLLGNGKFVD  219 (270)
Q Consensus       205 t~~~~~~~~~~~~~~  219 (270)
                      |.-.+.+...+-+..
T Consensus       275 T~Ass~Ip~~~ly~~  289 (398)
T PRK13656        275 TQASSAIPVMPLYIS  289 (398)
T ss_pred             chhhhcCCCcHHHHH
Confidence            988877765544443

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.89  E-value=2.7e-21  Score=169.43  Aligned_cols=222  Identities=14%  Similarity=0.190  Sum_probs=159.8

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK--GLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      +||++|||||+|+||++++++|+++|++|++++|+.+..+.........  ..++.++.+|+++.+++++++        
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~--------   75 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAI--------   75 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHH--------
Confidence            5799999999999999999999999999999988876554432222211  246888999999999888777        


Q ss_pred             CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCC-----------
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSAN-----------  165 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~-----------  165 (270)
                      .++|++||+||....    ..+.+.+.+.+++|+.+++++++++.+.+   +.++||++||..++.+..           
T Consensus        76 ~~~d~vih~A~~~~~----~~~~~~~~~~~~~n~~g~~~ll~a~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~~E  148 (325)
T PLN02989         76 DGCETVFHTASPVAI----TVKTDPQVELINPAVNGTINVLRTCTKVS---SVKRVILTSSMAAVLAPETKLGPNDVVDE  148 (325)
T ss_pred             cCCCEEEEeCCCCCC----CCCCChHHHHHHHHHHHHHHHHHHHHHcC---CceEEEEecchhheecCCccCCCCCccCc
Confidence            358999999996432    23344577899999999999999997643   246899999987654321           


Q ss_pred             ---C--------ChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC-ChhhHHHHhh-cCCC----C
Q 024230          166 ---V--------GTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG-NGKFVDEVKS-RTPM----G  228 (270)
Q Consensus       166 ---~--------~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~-~~~~----~  228 (270)
                         .        ...|+.||.+.+.+++.++++   .++.++.+.|+.+..+....... .......+.. ..+.    +
T Consensus       149 ~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~~~~~r  225 (325)
T PLN02989        149 TFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKD---NEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFNTTHH  225 (325)
T ss_pred             CCCCchhHhcccccchHHHHHHHHHHHHHHHHH---cCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCCCCcCc
Confidence               0        135999999999999988765   37999999999999886543211 1112222211 1222    3


Q ss_pred             CCCChHhHHHHHHHHhCCCCCCccCcEEeecCC
Q 024230          229 RLGEPKEVSSLVAFLCMPAASYITGQTVCIDGG  261 (270)
Q Consensus       229 ~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG  261 (270)
                      .+..++|++++++.++....   .+..++++|+
T Consensus       226 ~~i~v~Dva~a~~~~l~~~~---~~~~~ni~~~  255 (325)
T PLN02989        226 RFVDVRDVALAHVKALETPS---ANGRYIIDGP  255 (325)
T ss_pred             CeeEHHHHHHHHHHHhcCcc---cCceEEEecC
Confidence            45678999999988875432   2346788544

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.88  E-value=1.6e-21  Score=157.98  Aligned_cols=194  Identities=23%  Similarity=0.224  Sum_probs=169.1

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC-----eEEEeeCChhHHHHHHHHHHhc----CCeEEEEEccCCCHHHHHHHHH
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGA-----TVHTCSRTETELNECIHHLQMK----GLKVTGSVCDVSSRPQRQTLIN   89 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~-----~v~l~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~   89 (270)
                      .-|+++|||+++|||.++|.+|++.-.     .+++++|+-++.++++..+.+.    ..++.++.+|++|..++..+..
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~   81 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK   81 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence            358999999999999999999999865     3778899999999999999875    3579999999999999999999


Q ss_pred             HHHHHcCCcccEEEECCCCCCCCC---------------------------CCCCCHHHHHHHHHHhhHHHHHHHHHHHH
Q 024230           90 TVSSLFNGKLNIFVNNVGTSVLKP---------------------------TLEYNAEDFSLVMSTNFESAFHLCQLAHP  142 (270)
Q Consensus        90 ~i~~~~~~~id~li~~ag~~~~~~---------------------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  142 (270)
                      ++..+| .++|.++.|||..+...                           ....+.+++.+.++.|++|++.+.+.+.|
T Consensus        82 di~~rf-~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~p  160 (341)
T KOG1478|consen   82 DIKQRF-QRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEP  160 (341)
T ss_pred             HHHHHh-hhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhh
Confidence            999999 79999999999754211                           12356788999999999999999999999


Q ss_pred             HHHhcCCcEEEEecCcccccc---------CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC
Q 024230          143 LLRASGAASIVLMSSALGIVS---------ANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG  213 (270)
Q Consensus       143 ~m~~~~~g~ii~iss~~~~~~---------~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~  213 (270)
                      .+..+....+|.+||..+...         ..+..+|+.||.+++-+.-.+.+.+.+.|+.-.+++||...|.+...+..
T Consensus       161 ll~~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~~~~~l~  240 (341)
T KOG1478|consen  161 LLCHSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNSFSEYLN  240 (341)
T ss_pred             HhhcCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecchhhhhhh
Confidence            999888889999999987533         35567899999999999999999999999999999999999988877654

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.87  E-value=4.5e-21  Score=169.14  Aligned_cols=233  Identities=15%  Similarity=0.063  Sum_probs=155.3

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhH-----HHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETE-----LNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINT   90 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   90 (270)
                      -++++|+||||||+|+||.+++++|+++|++|++++|+++.     ++...+.....+.++.++.+|++|.+++.++++.
T Consensus         2 ~~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   81 (340)
T PLN02653          2 GDPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDD   81 (340)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHH
Confidence            36789999999999999999999999999999999987543     1211111111234588899999999999888865


Q ss_pred             HHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-cEEEEecCccccccC-----
Q 024230           91 VSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGA-ASIVLMSSALGIVSA-----  164 (270)
Q Consensus        91 i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~-g~ii~iss~~~~~~~-----  164 (270)
                      +      ++|++||+|+.....    ...++....+++|+.++.++++++.+.+.+++. -++|++||...+...     
T Consensus        82 ~------~~d~Vih~A~~~~~~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~  151 (340)
T PLN02653         82 I------KPDEVYNLAAQSHVA----VSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQS  151 (340)
T ss_pred             c------CCCEEEECCcccchh----hhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCC
Confidence            3      589999999975432    123345677899999999999999887654311 268888876443321     


Q ss_pred             -----CCChhhhhhHHHHHHHHHHHHHHHcc---CCceEEEEecCcccCCCCccccCChhhHHHHhhc----------CC
Q 024230          165 -----NVGTVYSATKGAMNQLAKNLACEWAK---DNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSR----------TP  226 (270)
Q Consensus       165 -----~~~~~y~~sKaal~~~~~sla~el~~---~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~----------~~  226 (270)
                           .....|+.||.+.+.++++++.++..   .++.++.+.|+...+.+...+   ......+...          ..
T Consensus       152 E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~g~~  228 (340)
T PLN02653        152 ETTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKI---TRAVGRIKVGLQKKLFLGNLDA  228 (340)
T ss_pred             CCCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHH---HHHHHHHHcCCCCceEeCCCcc
Confidence                 12457999999999999999887642   123334444543221110000   0111111111          11


Q ss_pred             CCCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCcccc
Q 024230          227 MGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       227 ~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                      ...+...+|++++++.++...    .+..+++.+|..++
T Consensus       229 ~rd~i~v~D~a~a~~~~~~~~----~~~~yni~~g~~~s  263 (340)
T PLN02653        229 SRDWGFAGDYVEAMWLMLQQE----KPDDYVVATEESHT  263 (340)
T ss_pred             eecceeHHHHHHHHHHHHhcC----CCCcEEecCCCcee
Confidence            234568999999999888542    25678998887654

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.87  E-value=4.5e-20  Score=161.51  Aligned_cols=223  Identities=15%  Similarity=0.169  Sum_probs=156.4

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK--GLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      +-+||+|+||||+|+||.+++++|+++|++|+++.|+.+..+.........  ..++.++.+|+++.+++.+++      
T Consensus         2 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~------   75 (322)
T PLN02986          2 NGGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAI------   75 (322)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHH------
Confidence            457899999999999999999999999999999998876544433222211  246788999999998887777      


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccc-cCC--------
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIV-SAN--------  165 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~-~~~--------  165 (270)
                        ..+|++||+|+.....   ..+  ...+.+++|+.++.++++++...   .+.++||++||.+++. +.+        
T Consensus        76 --~~~d~vih~A~~~~~~---~~~--~~~~~~~~nv~gt~~ll~~~~~~---~~v~rvV~~SS~~~~~~~~~~~~~~~~~  145 (322)
T PLN02986         76 --EGCDAVFHTASPVFFT---VKD--PQTELIDPALKGTINVLNTCKET---PSVKRVILTSSTAAVLFRQPPIEANDVV  145 (322)
T ss_pred             --hCCCEEEEeCCCcCCC---CCC--chhhhhHHHHHHHHHHHHHHHhc---CCccEEEEecchhheecCCccCCCCCCc
Confidence              3589999999864321   111  23467899999999999887421   2346899999987542 110        


Q ss_pred             -------------CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC-ChhhHHHHhhcC-----C
Q 024230          166 -------------VGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG-NGKFVDEVKSRT-----P  226 (270)
Q Consensus       166 -------------~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~-----~  226 (270)
                                   ....|+.||.+.+.+++.+.++   .+++++.+.|+.+..+....... .......+....     .
T Consensus       146 ~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~  222 (322)
T PLN02986        146 DETFFSDPSLCRETKNWYPLSKILAENAAWEFAKD---NGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLFNNR  222 (322)
T ss_pred             CcccCCChHHhhccccchHHHHHHHHHHHHHHHHH---hCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCCCCCc
Confidence                         1245999999999999888765   37999999999999886543211 112222222111     1


Q ss_pred             CCCCCChHhHHHHHHHHhCCCCCCccCcEEeecCC
Q 024230          227 MGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGG  261 (270)
Q Consensus       227 ~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG  261 (270)
                      ...+..++|+|++++.++....   .+..++++|+
T Consensus       223 ~~~~v~v~Dva~a~~~al~~~~---~~~~yni~~~  254 (322)
T PLN02986        223 FYRFVDVRDVALAHIKALETPS---ANGRYIIDGP  254 (322)
T ss_pred             CcceeEHHHHHHHHHHHhcCcc---cCCcEEEecC
Confidence            2346689999999988886432   2347788543

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.86  E-value=8.5e-20  Score=163.89  Aligned_cols=228  Identities=22%  Similarity=0.213  Sum_probs=186.8

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMK--GLKVTGSVCDVSSRPQRQTLINTV   91 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~i   91 (270)
                      +..++||+||||||+|.||.++|+++++.+. ++++++|++.++-.+..++++.  ..+..++.+|+.|.+.++.+++. 
T Consensus       245 ~~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~-  323 (588)
T COG1086         245 GAMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEG-  323 (588)
T ss_pred             HhHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhc-
Confidence            4678999999999999999999999999996 6999999999999998888875  46789999999999999988865 


Q ss_pred             HHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhh
Q 024230           92 SSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYS  171 (270)
Q Consensus        92 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~  171 (270)
                           .++|+++|+|+.-+. |+.|.++   .+-+.+|++|+.++++++    .+.+-.++|++|+..|..|.+   .||
T Consensus       324 -----~kvd~VfHAAA~KHV-Pl~E~nP---~Eai~tNV~GT~nv~~aa----~~~~V~~~V~iSTDKAV~PtN---vmG  387 (588)
T COG1086         324 -----HKVDIVFHAAALKHV-PLVEYNP---EEAIKTNVLGTENVAEAA----IKNGVKKFVLISTDKAVNPTN---VMG  387 (588)
T ss_pred             -----CCCceEEEhhhhccC-cchhcCH---HHHHHHhhHhHHHHHHHH----HHhCCCEEEEEecCcccCCch---Hhh
Confidence                 489999999998554 5556555   456889999999999999    556677999999998887754   699


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCC--------CCCCCChHhHHHHHHHH
Q 024230          172 ATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTP--------MGRLGEPKEVSSLVAFL  243 (270)
Q Consensus       172 ~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~dva~~~~~l  243 (270)
                      ++|...+.++++++......+-++..|.-|.|-....+-+   +-+.+++....|        .+.+++.+|.++.+++.
T Consensus       388 aTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSVi---PlFk~QI~~GgplTvTdp~mtRyfMTI~EAv~LVlqA  464 (588)
T COG1086         388 ATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSVI---PLFKKQIAEGGPLTVTDPDMTRFFMTIPEAVQLVLQA  464 (588)
T ss_pred             HHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCCCH---HHHHHHHHcCCCccccCCCceeEEEEHHHHHHHHHHH
Confidence            9999999999999987766578999999988876544333   445555555443        24566789999999887


Q ss_pred             hCCCCCCccCcEEeecCCcccc
Q 024230          244 CMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       244 ~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                      ..-   .-.|+++.+|-|-++.
T Consensus       465 ~a~---~~gGeifvldMGepvk  483 (588)
T COG1086         465 GAI---AKGGEIFVLDMGEPVK  483 (588)
T ss_pred             Hhh---cCCCcEEEEcCCCCeE
Confidence            743   4689999999987653

>PRK06720 hypothetical protein; Provisional

Probab=99.86  E-value=3.3e-20  Score=147.20  Aligned_cols=143  Identities=15%  Similarity=0.163  Sum_probs=120.3

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .|+++||+++||||++|||.++|+.|+++|++|++++|+++..++..+++...+.+..++.+|+++.++++++++++.+.
T Consensus        11 ~~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~   90 (169)
T PRK06720         11 KMKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNA   90 (169)
T ss_pred             ccccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999988887777777766667888999999999999999999888


Q ss_pred             cCCcccEEEECCCCCCC-CCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-------CcEEEEecCcccc
Q 024230           95 FNGKLNIFVNNVGTSVL-KPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-------AASIVLMSSALGI  161 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-------~g~ii~iss~~~~  161 (270)
                      + +++|++|||||.... .++.+.++++ .+  .+|+.+.+..++.+.++|.+++       .|++..||+.++.
T Consensus        91 ~-G~iDilVnnAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (169)
T PRK06720         91 F-SRIDMLFQNAGLYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQS  161 (169)
T ss_pred             c-CCCCEEEECCCcCCCCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEecccccc
Confidence            8 799999999998764 4444545555 33  7788888999999999988764       4778888876553

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.85  E-value=2.1e-19  Score=159.29  Aligned_cols=227  Identities=13%  Similarity=0.095  Sum_probs=156.7

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEE-EeeCChhHH--HHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVH-TCSRTETEL--NECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~-l~~r~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      |+||||||+|+||+++++.|+++|++++ ++++.++..  .... .+ ..+.++.++.+|++|.++++++++.      .
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~Dl~d~~~~~~~~~~------~   73 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLA-PV-AQSERFAFEKVDICDRAELARVFTE------H   73 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhh-hc-ccCCceEEEECCCcChHHHHHHHhh------c
Confidence            6899999999999999999999998744 555543211  1111 11 1223577889999999998888764      3


Q ss_pred             cccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh-----cCCcEEEEecCccccc----------
Q 024230           98 KLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRA-----SGAASIVLMSSALGIV----------  162 (270)
Q Consensus        98 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~-----~~~g~ii~iss~~~~~----------  162 (270)
                      ++|++||+||....    ..+.+++++.+++|+.++.++++++.+.|..     .+..++|++||...+.          
T Consensus        74 ~~D~Vih~A~~~~~----~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~  149 (355)
T PRK10217         74 QPDCVMHLAAESHV----DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFT  149 (355)
T ss_pred             CCCEEEECCcccCc----chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcC
Confidence            69999999997532    2344567889999999999999999876421     1234899999865432          


Q ss_pred             ---cCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCC---------CCCC
Q 024230          163 ---SANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTP---------MGRL  230 (270)
Q Consensus       163 ---~~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~  230 (270)
                         +......|+.||.+.+.+++.+++++   ++++..+.|+.+..+-...-.-.+.+........+         ...+
T Consensus       150 E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~  226 (355)
T PRK10217        150 ETTPYAPSSPYSASKASSDHLVRAWLRTY---GLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDW  226 (355)
T ss_pred             CCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCc
Confidence               11234679999999999999988764   67888888888777643110000111121111111         2345


Q ss_pred             CChHhHHHHHHHHhCCCCCCccCcEEeecCCcccc
Q 024230          231 GEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       231 ~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                      ...+|+++++..++...   ..|+++++.+|..++
T Consensus       227 i~v~D~a~a~~~~~~~~---~~~~~yni~~~~~~s  258 (355)
T PRK10217        227 LYVEDHARALYCVATTG---KVGETYNIGGHNERK  258 (355)
T ss_pred             CcHHHHHHHHHHHHhcC---CCCCeEEeCCCCccc
Confidence            67999999998887542   357899999887654

>PLN02583 cinnamoyl-CoA reductase

Probab=99.85  E-value=3.9e-19  Score=154.00  Aligned_cols=219  Identities=11%  Similarity=-0.001  Sum_probs=150.4

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhH--HHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETE--LNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      +=++|+|+||||+|+||++++++|+++|++|+++.|+.+.  .......+...+.++.++.+|++|.+++.+++      
T Consensus         3 ~~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l------   76 (297)
T PLN02583          3 DESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDAL------   76 (297)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHH------
Confidence            3467899999999999999999999999999999986432  22223333222346888899999998887665      


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC-C--C-----
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA-N--V-----  166 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~-~--~-----  166 (270)
                        ...|.++|.++....     .+ +++++++++|+.+++++++++.+.+   +.++||++||..+.... +  .     
T Consensus        77 --~~~d~v~~~~~~~~~-----~~-~~~~~~~~~nv~gt~~ll~aa~~~~---~v~riV~~SS~~a~~~~~~~~~~~~~~  145 (297)
T PLN02583         77 --KGCSGLFCCFDPPSD-----YP-SYDEKMVDVEVRAAHNVLEACAQTD---TIEKVVFTSSLTAVIWRDDNISTQKDV  145 (297)
T ss_pred             --cCCCEEEEeCccCCc-----cc-ccHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEecchHheecccccCCCCCCC
Confidence              457888887653221     11 2457899999999999999997653   24689999998764311 0  0     


Q ss_pred             ----C----------hhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCC--CCCC
Q 024230          167 ----G----------TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTP--MGRL  230 (270)
Q Consensus       167 ----~----------~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~  230 (270)
                          +          ..|+.||...+.+++.++++   .|++++.|.|+.+..+.......   .........+  ...+
T Consensus       146 ~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~gi~~v~lrp~~v~Gp~~~~~~~---~~~~~~~~~~~~~~~~  219 (297)
T PLN02583        146 DERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMD---RGVNMVSINAGLLMGPSLTQHNP---YLKGAAQMYENGVLVT  219 (297)
T ss_pred             CcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHH---hCCcEEEEcCCcccCCCCCCchh---hhcCCcccCcccCcce
Confidence                0          15999999999999887654   48999999999998875432110   0000000000  1135


Q ss_pred             CChHhHHHHHHHHhCCCCCCccCcEEeecCC
Q 024230          231 GEPKEVSSLVAFLCMPAASYITGQTVCIDGG  261 (270)
Q Consensus       231 ~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG  261 (270)
                      ..++|+|++++..+...  ...| .+.+-++
T Consensus       220 v~V~Dva~a~~~al~~~--~~~~-r~~~~~~  247 (297)
T PLN02583        220 VDVNFLVDAHIRAFEDV--SSYG-RYLCFNH  247 (297)
T ss_pred             EEHHHHHHHHHHHhcCc--ccCC-cEEEecC
Confidence            67899999998888532  2234 4555544

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.85  E-value=1.1e-18  Score=154.72  Aligned_cols=214  Identities=18%  Similarity=0.143  Sum_probs=153.3

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      .+-++++||||||+|+||++++++|+++|++|++++|+.+..+.+...+.. +.++.++.+|+++.+++.+++       
T Consensus         6 ~~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~-------   77 (353)
T PLN02896          6 RESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE-GDRLRLFRADLQEEGSFDEAV-------   77 (353)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc-CCeEEEEECCCCCHHHHHHHH-------
Confidence            455778999999999999999999999999999999987766555544432 456888999999998877776       


Q ss_pred             CCcccEEEECCCCCCCCC-CCCCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCC-------
Q 024230           96 NGKLNIFVNNVGTSVLKP-TLEYNAEDF--SLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSAN-------  165 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~-~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~-------  165 (270)
                       ..+|++||+|+...... ....+++.+  ...++.|+.+++++++++.+..   +.++||++||.+.+...+       
T Consensus        78 -~~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~---~~~~~v~~SS~~vyg~~~~~~~~~~  153 (353)
T PLN02896         78 -KGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK---TVKRVVFTSSISTLTAKDSNGRWRA  153 (353)
T ss_pred             -cCCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC---CccEEEEEechhhccccccCCCCCC
Confidence             35899999999764332 122344433  3467788899999999885431   246899999986653110       


Q ss_pred             ------------------CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhh---c
Q 024230          166 ------------------VGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKS---R  224 (270)
Q Consensus       166 ------------------~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~---~  224 (270)
                                        ....|+.||.+.+.+++.++++   .++++..+.|+.+..|......  +.....+..   .
T Consensus       154 ~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyGp~~~~~~--~~~~~~~~~~~~g  228 (353)
T PLN02896        154 VVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKE---NGIDLVSVITTTVAGPFLTPSV--PSSIQVLLSPITG  228 (353)
T ss_pred             ccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCcCCCC--CchHHHHHHHhcC
Confidence                              1127999999999999988765   3799999999998888543221  111111110   0


Q ss_pred             -CC-------------CCCCCChHhHHHHHHHHhCC
Q 024230          225 -TP-------------MGRLGEPKEVSSLVAFLCMP  246 (270)
Q Consensus       225 -~~-------------~~~~~~~~dva~~~~~l~s~  246 (270)
                       ..             ...+..++|++++++.++..
T Consensus       229 ~~~~~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~~  264 (353)
T PLN02896        229 DSKLFSILSAVNSRMGSIALVHIEDICDAHIFLMEQ  264 (353)
T ss_pred             CccccccccccccccCceeEEeHHHHHHHHHHHHhC
Confidence             00             11356899999999988853

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.85  E-value=2.6e-19  Score=162.81  Aligned_cols=232  Identities=12%  Similarity=0.054  Sum_probs=159.1

Q ss_pred             cccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHH----------------HHHHHHH-HhcCCeEEEEE
Q 024230           13 QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETEL----------------NECIHHL-QMKGLKVTGSV   75 (270)
Q Consensus        13 ~~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~----------------~~~~~~~-~~~~~~~~~~~   75 (270)
                      .....+++|+||||||+|+||++++++|+++|++|+++++.....                .+..+.+ +..+.++.++.
T Consensus        40 ~~~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~  119 (442)
T PLN02572         40 GSSSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYV  119 (442)
T ss_pred             CCCccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEE
Confidence            345678899999999999999999999999999999987432100                0011111 11234688899


Q ss_pred             ccCCCHHHHHHHHHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-cEEEE
Q 024230           76 CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGA-ASIVL  154 (270)
Q Consensus        76 ~D~~~~~~~~~~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~-g~ii~  154 (270)
                      +|++|.+++.+++++      .++|++||+|+... .+....++++++..+++|+.+++++++++..    .+. .++|+
T Consensus       120 ~Dl~d~~~v~~~l~~------~~~D~ViHlAa~~~-~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~----~gv~~~~V~  188 (442)
T PLN02572        120 GDICDFEFLSEAFKS------FEPDAVVHFGEQRS-APYSMIDRSRAVFTQHNNVIGTLNVLFAIKE----FAPDCHLVK  188 (442)
T ss_pred             CCCCCHHHHHHHHHh------CCCCEEEECCCccc-ChhhhcChhhHHHHHHHHHHHHHHHHHHHHH----hCCCccEEE
Confidence            999999998888865      36899999997633 2344556667788899999999999998844    232 37999


Q ss_pred             ecCccccccC------------------------CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCcc
Q 024230          155 MSSALGIVSA------------------------NVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEP  210 (270)
Q Consensus       155 iss~~~~~~~------------------------~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~  210 (270)
                      +||...+...                        .....|+.||.+.+.+++.++..   .|+++..+.|+.+..+....
T Consensus       189 ~SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~---~gl~~v~lR~~~vyGp~~~~  265 (442)
T PLN02572        189 LGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTDE  265 (442)
T ss_pred             EecceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHh---cCCCEEEEecccccCCCCcc
Confidence            9988654311                        11247999999999999887655   58999999999998875322


Q ss_pred             cc-----------C------ChhhHHHHhhcCC---------CCCCCChHhHHHHHHHHhCCCCCCccC--cEEeecC
Q 024230          211 LL-----------G------NGKFVDEVKSRTP---------MGRLGEPKEVSSLVAFLCMPAASYITG--QTVCIDG  260 (270)
Q Consensus       211 ~~-----------~------~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~s~~~~~~~G--~~i~vdg  260 (270)
                      ..           .      ...+..+.....+         .+.+..++|++++++.++...  ...|  .++++.+
T Consensus       266 ~~~~~~li~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~--~~~g~~~i~Nigs  341 (442)
T PLN02572        266 TMMDEELINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANP--AKPGEFRVFNQFT  341 (442)
T ss_pred             cccccccccccCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhCh--hhcCceeEEEeCC
Confidence            10           0      0011111111111         124567999999998888532  1234  4677754

>PLN02650 dihydroflavonol-4-reductase

Probab=99.84  E-value=8e-19  Score=155.47  Aligned_cols=208  Identities=17%  Similarity=0.159  Sum_probs=149.2

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK--GLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      ..|+||||||+|.||.+++++|+++|++|++++|+.+............  ..++.++..|+++.+.+.+++        
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~--------   75 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAI--------   75 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHH--------
Confidence            5689999999999999999999999999999999876554443322211  135788999999998877776        


Q ss_pred             CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC----C-------
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA----N-------  165 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~----~-------  165 (270)
                      ..+|.+||+|+....   ...+  ..++.+++|+.+++++++++.+..   ..++||++||...+.+.    +       
T Consensus        76 ~~~d~ViH~A~~~~~---~~~~--~~~~~~~~Nv~gt~~ll~aa~~~~---~~~r~v~~SS~~~~~~~~~~~~~~~E~~~  147 (351)
T PLN02650         76 RGCTGVFHVATPMDF---ESKD--PENEVIKPTVNGMLSIMKACAKAK---TVRRIVFTSSAGTVNVEEHQKPVYDEDCW  147 (351)
T ss_pred             hCCCEEEEeCCCCCC---CCCC--chhhhhhHHHHHHHHHHHHHHhcC---CceEEEEecchhhcccCCCCCCccCcccC
Confidence            358999999986431   1112  235678999999999999986432   13589999998544221    0       


Q ss_pred             -----------CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHH---hhc------C
Q 024230          166 -----------VGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEV---KSR------T  225 (270)
Q Consensus       166 -----------~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~---~~~------~  225 (270)
                                 ....|+.||.+.+.+++.++.+   +|++++.+.|+.+..|........ .....+   ...      .
T Consensus       148 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~ilRp~~v~Gp~~~~~~~~-~~~~~~~~~~~~~~~~~~~  223 (351)
T PLN02650        148 SDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAE---NGLDFISIIPTLVVGPFISTSMPP-SLITALSLITGNEAHYSII  223 (351)
T ss_pred             CchhhhhccccccchHHHHHHHHHHHHHHHHHH---cCCeEEEECCCceECCCCCCCCCc-cHHHHHHHhcCCccccCcC
Confidence                       1136999999999999998776   589999999999999865432111 111111   000      1


Q ss_pred             CCCCCCChHhHHHHHHHHhCC
Q 024230          226 PMGRLGEPKEVSSLVAFLCMP  246 (270)
Q Consensus       226 ~~~~~~~~~dva~~~~~l~s~  246 (270)
                      ..+.+..++|++++++.++..
T Consensus       224 ~~r~~v~V~Dva~a~~~~l~~  244 (351)
T PLN02650        224 KQGQFVHLDDLCNAHIFLFEH  244 (351)
T ss_pred             CCcceeeHHHHHHHHHHHhcC
Confidence            123567899999999999864

>PLN02240 UDP-glucose 4-epimerase

Probab=99.84  E-value=7.1e-19  Score=155.71  Aligned_cols=235  Identities=15%  Similarity=0.156  Sum_probs=156.5

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHH---HHHHH-hcCCeEEEEEccCCCHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNEC---IHHLQ-MKGLKVTGSVCDVSSRPQRQTLINTV   91 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~---~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~i   91 (270)
                      |+|++|+|+||||+|+||.+++++|+++|++|++++|........   ...+. ..+.++.++.+|+++++++.++++. 
T Consensus         1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~-   79 (352)
T PLN02240          1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAS-   79 (352)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHh-
Confidence            578899999999999999999999999999999998754322111   11111 1234577889999999998888764 


Q ss_pred             HHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC-------
Q 024230           92 SSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA-------  164 (270)
Q Consensus        92 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~-------  164 (270)
                           ..+|++||+|+.....    .+.+++.+.+++|+.++.++++++    .+.+..++|++||...+...       
T Consensus        80 -----~~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~E  146 (352)
T PLN02240         80 -----TRFDAVIHFAGLKAVG----ESVAKPLLYYDNNLVGTINLLEVM----AKHGCKKLVFSSSATVYGQPEEVPCTE  146 (352)
T ss_pred             -----CCCCEEEEccccCCcc----ccccCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEccHHHhCCCCCCCCCC
Confidence                 3789999999975322    133456778999999999998866    44455689999997544211       


Q ss_pred             ----CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCcc--------ccCC-hhhHHHHhh-cC-----
Q 024230          165 ----NVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEP--------LLGN-GKFVDEVKS-RT-----  225 (270)
Q Consensus       165 ----~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~--------~~~~-~~~~~~~~~-~~-----  225 (270)
                          .....|+.||.+.+.+++.++.+  ..++.+..+.++.+..+-...        +... ..+...+.. +.     
T Consensus       147 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (352)
T PLN02240        147 EFPLSATNPYGRTKLFIEEICRDIHAS--DPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTV  224 (352)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHh--cCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEE
Confidence                13467999999999999988765  235677777665443321110        0000 011222211 10     


Q ss_pred             -----------CCCCCCChHhHHHHHHHHhCCC--CCCccCcEEeecCCccccc
Q 024230          226 -----------PMGRLGEPKEVSSLVAFLCMPA--ASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       226 -----------~~~~~~~~~dva~~~~~l~s~~--~~~~~G~~i~vdgG~~~~~  266 (270)
                                 ....+..++|++++++.++...  .....|+++++.+|..+..
T Consensus       225 ~g~~~~~~~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~  278 (352)
T PLN02240        225 FGNDYPTKDGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSV  278 (352)
T ss_pred             eCCCCCCCCCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeH
Confidence                       0112356899999987776421  1224578999988876543

>PLN02214 cinnamoyl-CoA reductase

Probab=99.84  E-value=1.1e-18  Score=154.13  Aligned_cols=217  Identities=14%  Similarity=0.101  Sum_probs=152.3

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHH-HHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNE-CIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      .+++|+|+||||+|+||++++++|+++|++|++++|+.+.... ....+.....++.++.+|+++.+++.+++       
T Consensus         7 ~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-------   79 (342)
T PLN02214          7 SPAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAI-------   79 (342)
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHH-------
Confidence            3578999999999999999999999999999999998664322 12223222235788899999998887777       


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC----C------
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA----N------  165 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~----~------  165 (270)
                       ..+|++||+|+...         ++..+.+++|+.++.++++++.    +.+.++||++||..+..+.    +      
T Consensus        80 -~~~d~Vih~A~~~~---------~~~~~~~~~nv~gt~~ll~aa~----~~~v~r~V~~SS~~avyg~~~~~~~~~~~E  145 (342)
T PLN02214         80 -DGCDGVFHTASPVT---------DDPEQMVEPAVNGAKFVINAAA----EAKVKRVVITSSIGAVYMDPNRDPEAVVDE  145 (342)
T ss_pred             -hcCCEEEEecCCCC---------CCHHHHHHHHHHHHHHHHHHHH----hcCCCEEEEeccceeeeccCCCCCCcccCc
Confidence             35899999998642         1346779999999999999884    3445689999997544321    0      


Q ss_pred             -----------CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC--hhhHHHHhhcC-----CC
Q 024230          166 -----------VGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN--GKFVDEVKSRT-----PM  227 (270)
Q Consensus       166 -----------~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~--~~~~~~~~~~~-----~~  227 (270)
                                 ....|+.||.+.+.+++.++.+   .|+++..+.|+.+..+........  ......+....     ..
T Consensus       146 ~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~---~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~  222 (342)
T PLN02214        146 SCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKE---KGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLT  222 (342)
T ss_pred             ccCCChhhccccccHHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCCCCC
Confidence                       1236999999999999888766   379999999999988754321100  01111111111     11


Q ss_pred             CCCCChHhHHHHHHHHhCCCCCCccCcEEeecC
Q 024230          228 GRLGEPKEVSSLVAFLCMPAASYITGQTVCIDG  260 (270)
Q Consensus       228 ~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdg  260 (270)
                      ..+...+|++++++.++...  . .|..+++.+
T Consensus       223 ~~~i~V~Dva~a~~~al~~~--~-~~g~yn~~~  252 (342)
T PLN02214        223 QAYVDVRDVALAHVLVYEAP--S-ASGRYLLAE  252 (342)
T ss_pred             cCeeEHHHHHHHHHHHHhCc--c-cCCcEEEec
Confidence            24557999999998888542  1 233566654

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.83  E-value=3.6e-18  Score=150.54  Aligned_cols=209  Identities=16%  Similarity=0.106  Sum_probs=146.7

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHH--HHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECI--HHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~--~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      +++|+|+||||+|+||.+++++|+++|++|+++.|+.+......  ..+.. ..++.++.+|++|.+++.+++       
T Consensus         7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~-------   78 (338)
T PLN00198          7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQE-LGDLKIFGADLTDEESFEAPI-------   78 (338)
T ss_pred             CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCC-CCceEEEEcCCCChHHHHHHH-------
Confidence            45789999999999999999999999999998888765433221  11211 135788899999998877766       


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC-----------
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA-----------  164 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~-----------  164 (270)
                       .++|++||+|+...   ....  +...+.+++|+.++.++++++.+.   .+.+++|++||.+.+...           
T Consensus        79 -~~~d~vih~A~~~~---~~~~--~~~~~~~~~nv~g~~~ll~a~~~~---~~~~~~v~~SS~~~~g~~~~~~~~~~~~E  149 (338)
T PLN00198         79 -AGCDLVFHVATPVN---FASE--DPENDMIKPAIQGVHNVLKACAKA---KSVKRVILTSSAAAVSINKLSGTGLVMNE  149 (338)
T ss_pred             -hcCCEEEEeCCCCc---cCCC--ChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeecceeeeccCCCCCCceecc
Confidence             46899999998532   1111  223567899999999999998542   234689999998765421           


Q ss_pred             -------------CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCCh-hhHHHHhhc------
Q 024230          165 -------------NVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNG-KFVDEVKSR------  224 (270)
Q Consensus       165 -------------~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~-~~~~~~~~~------  224 (270)
                                   +....|+.||.+.+.+++.++++   .|+++..+.|+.+..|......... .........      
T Consensus       150 ~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~  226 (338)
T PLN00198        150 KNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLIN  226 (338)
T ss_pred             ccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHh---cCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccc
Confidence                         12346999999999999988765   4799999999999887543211110 001111110      


Q ss_pred             ----CC----CCCCCChHhHHHHHHHHhCC
Q 024230          225 ----TP----MGRLGEPKEVSSLVAFLCMP  246 (270)
Q Consensus       225 ----~~----~~~~~~~~dva~~~~~l~s~  246 (270)
                          .+    ...+..++|++++++.++..
T Consensus       227 g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~  256 (338)
T PLN00198        227 GLKGMQMLSGSISITHVEDVCRAHIFLAEK  256 (338)
T ss_pred             cccccccccCCcceeEHHHHHHHHHHHhhC
Confidence                01    12467899999999888864

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.83  E-value=2.5e-18  Score=150.36  Aligned_cols=209  Identities=13%  Similarity=0.117  Sum_probs=145.9

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHH--hcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQ--MKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      ++|+||||||+|+||++++++|+++|++|++++|+............  ....++.++.+|+++.+++.+++        
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~--------   74 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVV--------   74 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHH--------
Confidence            47899999999999999999999999999999988654332221111  11246788999999988877776        


Q ss_pred             CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccc--ccC----------
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGI--VSA----------  164 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~--~~~----------  164 (270)
                      .++|++||+|+.....   ...+  ..+.+++|+.++.++++++...   .+..++|++||.+++  .+.          
T Consensus        75 ~~~d~Vih~A~~~~~~---~~~~--~~~~~~~nv~gt~~ll~a~~~~---~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E  146 (322)
T PLN02662         75 DGCEGVFHTASPFYHD---VTDP--QAELIDPAVKGTLNVLRSCAKV---PSVKRVVVTSSMAAVAYNGKPLTPDVVVDE  146 (322)
T ss_pred             cCCCEEEEeCCcccCC---CCCh--HHHHHHHHHHHHHHHHHHHHhC---CCCCEEEEccCHHHhcCCCcCCCCCCcCCc
Confidence            4689999999864321   1112  2467899999999999998532   134689999997642  111          


Q ss_pred             -----CC-----ChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC-ChhhHHHHhhcC-----CCC
Q 024230          165 -----NV-----GTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG-NGKFVDEVKSRT-----PMG  228 (270)
Q Consensus       165 -----~~-----~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~-----~~~  228 (270)
                           |.     ...|+.+|.+.+.+++.+.++   .++++..+.|+.+..+....... ............     ...
T Consensus       147 ~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (322)
T PLN02662        147 TWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKE---NGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTFPNASY  223 (322)
T ss_pred             ccCCChhHhhcccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCccCCCCCc
Confidence                 10     136999999999998887655   47999999999999886433211 111111111111     123


Q ss_pred             CCCChHhHHHHHHHHhCC
Q 024230          229 RLGEPKEVSSLVAFLCMP  246 (270)
Q Consensus       229 ~~~~~~dva~~~~~l~s~  246 (270)
                      .+..++|++++++.++..
T Consensus       224 ~~i~v~Dva~a~~~~~~~  241 (322)
T PLN02662        224 RWVDVRDVANAHIQAFEI  241 (322)
T ss_pred             CeEEHHHHHHHHHHHhcC
Confidence            457799999999888864

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.83  E-value=2.4e-18  Score=152.31  Aligned_cols=231  Identities=13%  Similarity=0.058  Sum_probs=159.2

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHH----h-cCCeEEEEEccCCCHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQ----M-KGLKVTGSVCDVSSRPQRQTLINT   90 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~----~-~~~~~~~~~~D~~~~~~~~~~~~~   90 (270)
                      ..+++|+|+||||+|.||.+++++|+++|++|++++|.............    . ...++.++.+|++|.+++.+++  
T Consensus        11 ~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~--   88 (348)
T PRK15181         11 LVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKAC--   88 (348)
T ss_pred             ccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHh--
Confidence            46778999999999999999999999999999999986543222111111    1 1135778999999988777666  


Q ss_pred             HHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCC-----
Q 024230           91 VSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSAN-----  165 (270)
Q Consensus        91 i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~-----  165 (270)
                            ..+|++||+|+......    +.++..+.+++|+.++.++++++    ++.+..++|++||...+...+     
T Consensus        89 ------~~~d~ViHlAa~~~~~~----~~~~~~~~~~~Nv~gt~nll~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~  154 (348)
T PRK15181         89 ------KNVDYVLHQAALGSVPR----SLKDPIATNSANIDGFLNMLTAA----RDAHVSSFTYAASSSTYGDHPDLPKI  154 (348)
T ss_pred             ------hCCCEEEECccccCchh----hhhCHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEeechHhhCCCCCCCCC
Confidence                  35899999999743211    22234467899999999999887    444556899999886543211     


Q ss_pred             ------CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC----ChhhHHHHhhcCC---------
Q 024230          166 ------VGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG----NGKFVDEVKSRTP---------  226 (270)
Q Consensus       166 ------~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~~---------  226 (270)
                            ....|+.||.+.+.+++.++.+   .++++..+.|+.+..|-...-..    .+.+........+         
T Consensus       155 e~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~  231 (348)
T PRK15181        155 EERIGRPLSPYAVTKYVNELYADVFARS---YEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGST  231 (348)
T ss_pred             CCCCCCCCChhhHHHHHHHHHHHHHHHH---hCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCc
Confidence                  2347999999999999887654   47999999999888874321100    1222222222211         


Q ss_pred             CCCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCcccc
Q 024230          227 MGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       227 ~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                      .+.+...+|++++++..+........|+++++.+|..+.
T Consensus       232 ~rd~i~v~D~a~a~~~~~~~~~~~~~~~~yni~~g~~~s  270 (348)
T PRK15181        232 SRDFCYIENVIQANLLSATTNDLASKNKVYNVAVGDRTS  270 (348)
T ss_pred             eEeeEEHHHHHHHHHHHHhcccccCCCCEEEecCCCcEe
Confidence            123456899999987766432222468999998887654

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.82  E-value=9.2e-19  Score=154.62  Aligned_cols=227  Identities=16%  Similarity=0.071  Sum_probs=145.9

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhH-----HHHHHHHHH-hcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETE-----LNECIHHLQ-MKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~-----~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      |+||||||+|+||++++++|+++|++|++++|+.+.     .+.....+. ..+..+.++.+|++|.+++.++++.+   
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~---   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI---   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence            689999999999999999999999999999987642     111111111 11245788999999999988888652   


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccccc-----------
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVS-----------  163 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~-----------  163 (270)
                         ++|++||+|+......    ..+.-...+++|+.++.++++++.+.-.+ +..++|++||...+..           
T Consensus        78 ---~~d~ViH~Aa~~~~~~----~~~~~~~~~~~n~~gt~~ll~a~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~E~~~  149 (343)
T TIGR01472        78 ---KPTEIYNLAAQSHVKV----SFEIPEYTADVDGIGTLRLLEAVRTLGLI-KSVKFYQASTSELYGKVQEIPQNETTP  149 (343)
T ss_pred             ---CCCEEEECCcccccch----hhhChHHHHHHHHHHHHHHHHHHHHhCCC-cCeeEEEeccHHhhCCCCCCCCCCCCC
Confidence               5899999999754321    12223567789999999999998653111 1237899998754431           


Q ss_pred             CCCChhhhhhHHHHHHHHHHHHHHHccC---CceEEEEecCcccCCCCccccCChhhHHHHhhc----------CCCCCC
Q 024230          164 ANVGTVYSATKGAMNQLAKNLACEWAKD---NIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSR----------TPMGRL  230 (270)
Q Consensus       164 ~~~~~~y~~sKaal~~~~~sla~el~~~---~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~----------~~~~~~  230 (270)
                      ......|+.||.+.+.+++.++.++.-.   ++.++...|+.-...+...   .......+...          .....+
T Consensus       150 ~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~g~~~rd~  226 (343)
T TIGR01472       150 FYPRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRK---ITRAAAKIKLGLQEKLYLGNLDAKRDW  226 (343)
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchH---HHHHHHHHHcCCCCceeeCCCccccCc
Confidence            1134579999999999999998775321   1122223333111000000   01111111111          122345


Q ss_pred             CChHhHHHHHHHHhCCCCCCccCcEEeecCCcccc
Q 024230          231 GEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       231 ~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                      ...+|++++++.++...    .+..+++.+|..++
T Consensus       227 i~V~D~a~a~~~~~~~~----~~~~yni~~g~~~s  257 (343)
T TIGR01472       227 GHAKDYVEAMWLMLQQD----KPDDYVIATGETHS  257 (343)
T ss_pred             eeHHHHHHHHHHHHhcC----CCccEEecCCCcee
Confidence            67999999998887542    23578998887654

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.82  E-value=3.2e-18  Score=148.91  Aligned_cols=224  Identities=15%  Similarity=0.100  Sum_probs=154.4

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCC--CeEEEeeCChh--HHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           22 TALVTGGTKGLGLAVVEELSMLG--ATVHTCSRTET--ELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G--~~v~l~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      +|+||||+|+||.+++++|+++|  ++|++++|...  ..+.. ..+.. ..++.++.+|++|++++.++++.      .
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~------~   72 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENL-ADLED-NPRYRFVKGDIGDRELVSRLFTE------H   72 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhh-hhhcc-CCCcEEEEcCCcCHHHHHHHHhh------c
Confidence            48999999999999999999998  78988876432  11111 12211 23577889999999998888754      2


Q ss_pred             cccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC------------C
Q 024230           98 KLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA------------N  165 (270)
Q Consensus        98 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~------------~  165 (270)
                      ++|++||+|+.....    .+.+..+..+++|+.++..+++++.+.+.   +.++|++||...+...            .
T Consensus        73 ~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~  145 (317)
T TIGR01181        73 QPDAVVHFAAESHVD----RSISGPAAFIETNVVGTYTLLEAVRKYWH---EFRFHHISTDEVYGDLEKGDAFTETTPLA  145 (317)
T ss_pred             CCCEEEEcccccCch----hhhhCHHHHHHHHHHHHHHHHHHHHhcCC---CceEEEeeccceeCCCCCCCCcCCCCCCC
Confidence            589999999875421    23345667899999999999988854331   2479999986533211            1


Q ss_pred             CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCC---------CCCCChHhH
Q 024230          166 VGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPM---------GRLGEPKEV  236 (270)
Q Consensus       166 ~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dv  236 (270)
                      ....|+.+|.+.+.+++.++.+   .++++..+.|+.+..+......-.+..........+.         ..+..++|+
T Consensus       146 ~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~  222 (317)
T TIGR01181       146 PSSPYSASKAASDHLVRAYHRT---YGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDH  222 (317)
T ss_pred             CCCchHHHHHHHHHHHHHHHHH---hCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHH
Confidence            2347999999999999998766   3789999999988776432110011222222222211         124468999


Q ss_pred             HHHHHHHhCCCCCCccCcEEeecCCccccc
Q 024230          237 SSLVAFLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       237 a~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                      ++++..++.+.   ..|+++++.+|..++.
T Consensus       223 a~~~~~~~~~~---~~~~~~~~~~~~~~s~  249 (317)
T TIGR01181       223 CRAIYLVLEKG---RVGETYNIGGGNERTN  249 (317)
T ss_pred             HHHHHHHHcCC---CCCceEEeCCCCceeH
Confidence            99998888542   4678999988876654

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.82  E-value=4.1e-18  Score=150.01  Aligned_cols=230  Identities=13%  Similarity=0.097  Sum_probs=153.2

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhc-CCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK-GLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      ++|+||||+|+||.+++++|+++|++|++++|..+........+... +.++.++.+|++|.+++.++++.      .++
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~------~~~   74 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD------HAI   74 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc------CCC
Confidence            36999999999999999999999999999886543332222223222 34567789999999988887753      479


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC------------CCC
Q 024230          100 NIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA------------NVG  167 (270)
Q Consensus       100 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~------------~~~  167 (270)
                      |++||+|+......    ..+...+.+++|+.++.++++++    ++.+.+++|++||...+...            ...
T Consensus        75 d~vvh~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~  146 (338)
T PRK10675         75 DTVIHFAGLKAVGE----SVQKPLEYYDNNVNGTLRLISAM----RAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQ  146 (338)
T ss_pred             CEEEECCccccccc----hhhCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEeccHHhhCCCCCCccccccCCCCCC
Confidence            99999998754322    22334567899999999998766    55555689999997644211            225


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC---------hhhHHHHhh-cC------------
Q 024230          168 TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN---------GKFVDEVKS-RT------------  225 (270)
Q Consensus       168 ~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~---------~~~~~~~~~-~~------------  225 (270)
                      ..|+.+|.+.+.++++++++.  .++++..+.++.+..+........         ......+.. ..            
T Consensus       147 ~~Y~~sK~~~E~~~~~~~~~~--~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (338)
T PRK10675        147 SPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPT  224 (338)
T ss_pred             ChhHHHHHHHHHHHHHHHHhc--CCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCC
Confidence            689999999999999987653  256677777655554422111110         011111211 10            


Q ss_pred             ----CCCCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCccccc
Q 024230          226 ----PMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       226 ----~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                          ....+...+|++++++.++........|+++++.+|..++.
T Consensus       225 ~~g~~~~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~  269 (338)
T PRK10675        225 EDGTGVRDYIHVMDLADGHVAAMEKLANKPGVHIYNLGAGVGSSV  269 (338)
T ss_pred             CCCcEEEeeEEHHHHHHHHHHHHHhhhccCCCceEEecCCCceeH
Confidence                01235678999999987775322233468999988876543

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.82  E-value=7.8e-18  Score=143.73  Aligned_cols=223  Identities=13%  Similarity=0.128  Sum_probs=164.6

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHH--HHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNE--CIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      ++++|+||||+|.||..++++|+++||+|+.+.|+++..+.  ....++....+...+..|+++++++.+++        
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai--------   76 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAI--------   76 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHH--------
Confidence            78999999999999999999999999999999999988544  35555555667999999999999999998        


Q ss_pred             CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCccccccC-CC--------
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIVSA-NV--------  166 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~~~~~~-~~--------  166 (270)
                      ..+|+++|.|........   ++  -.+.++..+.|+.++++++.    +.+ -.++|++||.++.... +.        
T Consensus        77 ~gcdgVfH~Asp~~~~~~---~~--e~~li~pav~Gt~nVL~ac~----~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvd  147 (327)
T KOG1502|consen   77 DGCDGVFHTASPVDFDLE---DP--EKELIDPAVKGTKNVLEACK----KTKSVKRVVYTSSTAAVRYNGPNIGENSVVD  147 (327)
T ss_pred             hCCCEEEEeCccCCCCCC---Cc--HHhhhhHHHHHHHHHHHHHh----ccCCcceEEEeccHHHhccCCcCCCCCcccc
Confidence            568999999986543221   11  13689999999999999994    333 5689999999987653 11        


Q ss_pred             ---C----------hhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC-hh-hHHHHhh----cCC-
Q 024230          167 ---G----------TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN-GK-FVDEVKS----RTP-  226 (270)
Q Consensus       167 ---~----------~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~-~~-~~~~~~~----~~~-  226 (270)
                         +          ..|+.||..-+..+..++.|   .|+...+|.|+.|-.|........ .. ..+.+.-    ... 
T Consensus       148 E~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e---~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~  224 (327)
T KOG1502|consen  148 EESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKE---NGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNF  224 (327)
T ss_pred             cccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHh---CCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCC
Confidence               1          25888887666666666655   379999999999998876662211 11 1111111    111 


Q ss_pred             CCCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCcc
Q 024230          227 MGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFT  263 (270)
Q Consensus       227 ~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~  263 (270)
                      ...+...+|+|++.+++...  ..-.|+.+.++....
T Consensus       225 ~~~~VdVrDVA~AHv~a~E~--~~a~GRyic~~~~~~  259 (327)
T KOG1502|consen  225 WLAFVDVRDVALAHVLALEK--PSAKGRYICVGEVVS  259 (327)
T ss_pred             ceeeEeHHHHHHHHHHHHcC--cccCceEEEecCccc
Confidence            12246799999999999954  334599888877655

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.81  E-value=2.8e-19  Score=151.17  Aligned_cols=222  Identities=20%  Similarity=0.222  Sum_probs=157.0

Q ss_pred             EEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhc--CCe----EEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           23 ALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMK--GLK----VTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        23 vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~--~~~----~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      ||||||+|.||++++++|++.+- ++++++|++..+-.+..++...  +.+    +..+.+|++|.+.++.++++     
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~-----   75 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEE-----   75 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhh-----
Confidence            79999999999999999999994 7999999999998888888532  222    34568899999998888864     


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKG  175 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKa  175 (270)
                       .++|+++|.|+.-+. |+.+..+   .+.+.+|+.|+.++++++.    +.+..++|++|+..|..|.   ..||+||.
T Consensus        76 -~~pdiVfHaAA~KhV-pl~E~~p---~eav~tNv~GT~nv~~aa~----~~~v~~~v~ISTDKAv~Pt---nvmGatKr  143 (293)
T PF02719_consen   76 -YKPDIVFHAAALKHV-PLMEDNP---FEAVKTNVLGTQNVAEAAI----EHGVERFVFISTDKAVNPT---NVMGATKR  143 (293)
T ss_dssp             --T-SEEEE------H-HHHCCCH---HHHHHHHCHHHHHHHHHHH----HTT-SEEEEEEECGCSS-----SHHHHHHH
T ss_pred             -cCCCEEEEChhcCCC-ChHHhCH---HHHHHHHHHHHHHHHHHHH----HcCCCEEEEccccccCCCC---cHHHHHHH
Confidence             489999999998554 3444444   5679999999999999994    4567799999999887754   57999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCC--------CCCCChHhHHHHHHHHhCCC
Q 024230          176 AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPM--------GRLGEPKEVSSLVAFLCMPA  247 (270)
Q Consensus       176 al~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~dva~~~~~l~s~~  247 (270)
                      ..+.++.+.+......+.++.+|.-|.|-....+-+   +-+.+++....|.        +.+.+++|.++.++..+.-.
T Consensus       144 laE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSVi---p~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lvl~a~~~~  220 (293)
T PF02719_consen  144 LAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSVI---PLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLVLQAAALA  220 (293)
T ss_dssp             HHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSCH---HHHHHHHHTTSSEEECETT-EEEEE-HHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHhhhCCCCCcEEEEEEecceecCCCcHH---HHHHHHHHcCCcceeCCCCcEEEEecHHHHHHHHHHHHhhC
Confidence            999999999988766778999999887765433222   4556666655443        44668999999998877432


Q ss_pred             CCCccCcEEeecCCcccccc
Q 024230          248 ASYITGQTVCIDGGFTVNGF  267 (270)
Q Consensus       248 ~~~~~G~~i~vdgG~~~~~~  267 (270)
                         ..|+++..|-|..+.-.
T Consensus       221 ---~~geifvl~mg~~v~I~  237 (293)
T PF02719_consen  221 ---KGGEIFVLDMGEPVKIL  237 (293)
T ss_dssp             ----TTEEEEE---TCEECC
T ss_pred             ---CCCcEEEecCCCCcCHH
Confidence               47999999999876543

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PLN02686 cinnamoyl-CoA reductase

Probab=99.80  E-value=2e-17  Score=147.36  Aligned_cols=227  Identities=12%  Similarity=0.046  Sum_probs=151.5

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhc------CCeEEEEEccCCCHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK------GLKVTGSVCDVSSRPQRQTLI   88 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~   88 (270)
                      ..+.++|+||||||+|+||.+++++|+++|++|+++.|+.+..+.+ .++...      ...+.++.+|++|.+++.+++
T Consensus        48 ~~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i  126 (367)
T PLN02686         48 GADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEAF  126 (367)
T ss_pred             ccCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHHH
Confidence            4578899999999999999999999999999999988887655443 223211      124778899999999888877


Q ss_pred             HHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEecCcccc-c----
Q 024230           89 NTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRAS-GAASIVLMSSALGI-V----  162 (270)
Q Consensus        89 ~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~ii~iss~~~~-~----  162 (270)
                      +        .+|.++|+++..........    .....++|+.++.++++++.    +. +..++|++||..+. .    
T Consensus       127 ~--------~~d~V~hlA~~~~~~~~~~~----~~~~~~~nv~gt~~llea~~----~~~~v~r~V~~SS~~~~vyg~~~  190 (367)
T PLN02686        127 D--------GCAGVFHTSAFVDPAGLSGY----TKSMAELEAKASENVIEACV----RTESVRKCVFTSSLLACVWRQNY  190 (367)
T ss_pred             H--------hccEEEecCeeecccccccc----cchhhhhhHHHHHHHHHHHH----hcCCccEEEEeccHHHhcccccC
Confidence            4        46899999887543221111    12345789999999988873    32 35589999996421 0    


Q ss_pred             cC------------------CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhc
Q 024230          163 SA------------------NVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSR  224 (270)
Q Consensus       163 ~~------------------~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~  224 (270)
                      +.                  .....|+.||.+.+.+++.++++   .|++++.+.|+.+..|....... ......+...
T Consensus       191 ~~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~gl~~v~lRp~~vyGp~~~~~~~-~~~~~~~~g~  266 (367)
T PLN02686        191 PHDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG---KGLKLATICPALVTGPGFFRRNS-TATIAYLKGA  266 (367)
T ss_pred             CCCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh---cCceEEEEcCCceECCCCCCCCC-hhHHHHhcCC
Confidence            00                  01236999999999999988765   58999999999999985322111 0111111111


Q ss_pred             C-CC----CCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCcc
Q 024230          225 T-PM----GRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFT  263 (270)
Q Consensus       225 ~-~~----~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~  263 (270)
                      . ..    ..+...+|++++++.++........|..+ +-+|..
T Consensus       267 ~~~~g~g~~~~v~V~Dva~A~~~al~~~~~~~~~~~y-i~~g~~  309 (367)
T PLN02686        267 QEMLADGLLATADVERLAEAHVCVYEAMGNKTAFGRY-ICFDHV  309 (367)
T ss_pred             CccCCCCCcCeEEHHHHHHHHHHHHhccCCCCCCCcE-EEeCCC
Confidence            1 11    12567999999998887531112245555 444443

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.79  E-value=1.9e-17  Score=146.64  Aligned_cols=225  Identities=15%  Similarity=0.108  Sum_probs=151.5

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCCe-EEEeeCChh--HHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGAT-VHTCSRTET--ELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~~-v~l~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      +||||||+|+||.+++++|+++|++ |+.+++...  ..+... .+. .+.++.++.+|++|.+++++++++      ..
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~Dl~d~~~~~~~~~~------~~   73 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLA-DVS-DSERYVFEHADICDRAELDRIFAQ------HQ   73 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHH-hcc-cCCceEEEEecCCCHHHHHHHHHh------cC
Confidence            6999999999999999999999986 555665321  112211 111 134577889999999998888864      37


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEecCcccccc----------
Q 024230           99 LNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRAS-----GAASIVLMSSALGIVS----------  163 (270)
Q Consensus        99 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-----~~g~ii~iss~~~~~~----------  163 (270)
                      +|++||+|+......    +.+..++.+++|+.++.++++++.++|.+.     +..++|++||...+..          
T Consensus        74 ~d~vih~A~~~~~~~----~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~  149 (352)
T PRK10084         74 PDAVMHLAAESHVDR----SITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENS  149 (352)
T ss_pred             CCEEEECCcccCCcc----hhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCcccccccc
Confidence            999999999753211    122346789999999999999998876432     2347999998754321          


Q ss_pred             -----------CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCC------
Q 024230          164 -----------ANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTP------  226 (270)
Q Consensus       164 -----------~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~------  226 (270)
                                 ......|+.||.+.+.+++.++.++   ++++..+.|+.+..+......-............+      
T Consensus       150 ~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (352)
T PRK10084        150 EELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTY---GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGK  226 (352)
T ss_pred             ccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCC
Confidence                       0123579999999999999988764   56777777777766542110000111121211111      


Q ss_pred             ---CCCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCccc
Q 024230          227 ---MGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTV  264 (270)
Q Consensus       227 ---~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~  264 (270)
                         ...+..++|+++++..++...   ..|+++++.+|...
T Consensus       227 g~~~~~~v~v~D~a~a~~~~l~~~---~~~~~yni~~~~~~  264 (352)
T PRK10084        227 GDQIRDWLYVEDHARALYKVVTEG---KAGETYNIGGHNEK  264 (352)
T ss_pred             CCeEEeeEEHHHHHHHHHHHHhcC---CCCceEEeCCCCcC
Confidence               123567999999998887532   35788999887654

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.79  E-value=4.3e-17  Score=144.41  Aligned_cols=222  Identities=18%  Similarity=0.136  Sum_probs=151.0

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCC--CeEEEeeCChhHH---HHHHHHHHhcC--------CeEEEEEccCCCHH------
Q 024230           22 TALVTGGTKGLGLAVVEELSMLG--ATVHTCSRTETEL---NECIHHLQMKG--------LKVTGSVCDVSSRP------   82 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G--~~v~l~~r~~~~~---~~~~~~~~~~~--------~~~~~~~~D~~~~~------   82 (270)
                      +|+||||+|+||++++++|+++|  ++|+++.|+.+..   +++.+.+....        .++.++.+|++++.      
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            58999999999999999999999  6799999976532   23333332211        46889999998642      


Q ss_pred             HHHHHHHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccc
Q 024230           83 QRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIV  162 (270)
Q Consensus        83 ~~~~~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~  162 (270)
                      ....+.        ..+|++||||+.....       ..+++...+|+.++..+++.+.    +.+..+++++||...+.
T Consensus        81 ~~~~~~--------~~~d~vih~a~~~~~~-------~~~~~~~~~nv~g~~~ll~~a~----~~~~~~~v~iSS~~v~~  141 (367)
T TIGR01746        81 EWERLA--------ENVDTIVHNGALVNWV-------YPYSELRAANVLGTREVLRLAA----SGRAKPLHYVSTISVLA  141 (367)
T ss_pred             HHHHHH--------hhCCEEEeCCcEeccC-------CcHHHHhhhhhHHHHHHHHHHh----hCCCceEEEEccccccC
Confidence            222222        5789999999975321       1245677899999999988774    34445699999987654


Q ss_pred             cCC----------------CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHH-h---
Q 024230          163 SAN----------------VGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEV-K---  222 (270)
Q Consensus       163 ~~~----------------~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~-~---  222 (270)
                      ...                ....|+.+|.+.+.+++.++.    .|++++.+.||.+..+..............+ .   
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~  217 (367)
T TIGR01746       142 AIDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASD----RGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCL  217 (367)
T ss_pred             CcCCCCccccccccccccccCCChHHHHHHHHHHHHHHHh----cCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHH
Confidence            311                124699999999999877543    3899999999999876322221111111111 0   


Q ss_pred             h--cCCC-----CCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCccccc
Q 024230          223 S--RTPM-----GRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       223 ~--~~~~-----~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                      .  ..|.     ......+|+++++++++.......+|+++++.++..+++
T Consensus       218 ~~~~~p~~~~~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~s~  268 (367)
T TIGR01746       218 ALGAYPDSPELTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNPEPVSL  268 (367)
T ss_pred             HhCCCCCCCccccCcccHHHHHHHHHHHHhCCCcccCCceEEecCCCCCCH
Confidence            0  1111     125678999999999987654434589999998766554

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.79  E-value=4.8e-17  Score=137.53  Aligned_cols=202  Identities=16%  Similarity=0.080  Sum_probs=134.8

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCH-HHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR-PQRQTLINTVSSL   94 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~i~~~   94 (270)
                      .+.++|+|+|||++|+||+.++++|+++|++|+++.|+.++.....   . .+..+.++.+|+++. +++.+.       
T Consensus        13 ~~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---~-~~~~~~~~~~Dl~d~~~~l~~~-------   81 (251)
T PLN00141         13 ENVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSL---P-QDPSLQIVRADVTEGSDKLVEA-------   81 (251)
T ss_pred             ccccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhc---c-cCCceEEEEeeCCCCHHHHHHH-------
Confidence            4566789999999999999999999999999999999887654322   1 123688889999983 332222       


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccc---cCCCChhhh
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIV---SANVGTVYS  171 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~---~~~~~~~y~  171 (270)
                      +...+|++|+++|......  .      ...+++|+.++.++++++    .+.+.++||++||...+.   +.+....|.
T Consensus        82 ~~~~~d~vi~~~g~~~~~~--~------~~~~~~n~~~~~~ll~a~----~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~  149 (251)
T PLN00141         82 IGDDSDAVICATGFRRSFD--P------FAPWKVDNFGTVNLVEAC----RKAGVTRFILVSSILVNGAAMGQILNPAYI  149 (251)
T ss_pred             hhcCCCEEEECCCCCcCCC--C------CCceeeehHHHHHHHHHH----HHcCCCEEEEEccccccCCCcccccCcchh
Confidence            2126899999998642111  1      112468888988888887    455567999999986543   222334566


Q ss_pred             hhHHHHHHHHHHHHHH--HccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCC
Q 024230          172 ATKGAMNQLAKNLACE--WAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP  246 (270)
Q Consensus       172 ~sKaal~~~~~sla~e--l~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (270)
                      ..|.+...+...+..|  +...|++++.|.||++.++........     . ..........+++|+|+.+..++..
T Consensus       150 ~~~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~~~~~-----~-~~~~~~~~~i~~~dvA~~~~~~~~~  220 (251)
T PLN00141        150 FLNLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTGNIVM-----E-PEDTLYEGSISRDQVAEVAVEALLC  220 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCCceEEE-----C-CCCccccCcccHHHHHHHHHHHhcC
Confidence            6665444433333333  456799999999999987643221100     0 0011122356899999999999865

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.79  E-value=1.7e-17  Score=145.15  Aligned_cols=214  Identities=21%  Similarity=0.171  Sum_probs=150.4

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      ++++|||++|+||+.+++.|+++|++|++++|+++.....    .  ...+.++.+|+++.+++.+++        ..+|
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~--~~~~~~~~~D~~~~~~l~~~~--------~~~d   66 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL----E--GLDVEIVEGDLRDPASLRKAV--------AGCR   66 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccc----c--cCCceEEEeeCCCHHHHHHHH--------hCCC
Confidence            4799999999999999999999999999999987653221    1  124778899999998877776        4689


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCC--------------
Q 024230          101 IFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANV--------------  166 (270)
Q Consensus       101 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~--------------  166 (270)
                      ++||+++....      ..++.++.+++|+.++.++++++.    +.+.+++|++||...+...+.              
T Consensus        67 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~  136 (328)
T TIGR03466        67 ALFHVAADYRL------WAPDPEEMYAANVEGTRNLLRAAL----EAGVERVVYTSSVATLGVRGDGTPADETTPSSLDD  136 (328)
T ss_pred             EEEEeceeccc------CCCCHHHHHHHHHHHHHHHHHHHH----HhCCCeEEEEechhhcCcCCCCCCcCccCCCCccc
Confidence            99999985321      112346778999999999988874    444568999999876542111              


Q ss_pred             -ChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHH-HhhcCC-----CCCCCChHhHHHH
Q 024230          167 -GTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDE-VKSRTP-----MGRLGEPKEVSSL  239 (270)
Q Consensus       167 -~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~dva~~  239 (270)
                       ...|+.+|.+.+.+++.++.+   .++++..+.|+.+..+.............. .....+     ...+...+|++++
T Consensus       137 ~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a  213 (328)
T TIGR03466       137 MIGHYKRSKFLAEQAALEMAAE---KGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEG  213 (328)
T ss_pred             ccChHHHHHHHHHHHHHHHHHh---cCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeCCCcceEEHHHHHHH
Confidence             246999999999999988655   479999999998876543221111111111 111111     1124579999999


Q ss_pred             HHHHhCCCCCCccCcEEeecCCcccc
Q 024230          240 VAFLCMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       240 ~~~l~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                      +..++...   ..|+.+.++ |..++
T Consensus       214 ~~~~~~~~---~~~~~~~~~-~~~~s  235 (328)
T TIGR03466       214 HLLALERG---RIGERYILG-GENLT  235 (328)
T ss_pred             HHHHHhCC---CCCceEEec-CCCcC
Confidence            98877542   367888885 44444

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.78  E-value=3.5e-17  Score=142.89  Aligned_cols=227  Identities=15%  Similarity=0.115  Sum_probs=154.4

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcccE
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNI  101 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~  101 (270)
                      +|+||||+|+||..++++|+++|++|++++|...........+...+ .+..+.+|+++.+++.++++.      .++|+
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~------~~~d~   73 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERIT-RVTFVEGDLRDRELLDRLFEE------HKIDA   73 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhcccc-ceEEEECCCCCHHHHHHHHHh------CCCcE
Confidence            48999999999999999999999999988765443222222222212 577889999999998888763      57999


Q ss_pred             EEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC-----------CCChhh
Q 024230          102 FVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA-----------NVGTVY  170 (270)
Q Consensus       102 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~-----------~~~~~y  170 (270)
                      +|||||.....+    ..++..+.++.|+.++..+++++    .+.+..++|++||...+...           .....|
T Consensus        74 vv~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y  145 (328)
T TIGR01179        74 VIHFAGLIAVGE----SVQDPLKYYRNNVVNTLNLLEAM----QQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPY  145 (328)
T ss_pred             EEECccccCcch----hhcCchhhhhhhHHHHHHHHHHH----HhcCCCEEEEecchhhcCCCCCCCccccCCCCCCCch
Confidence            999999754322    22344567889999999998876    44455689998886543221           123579


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC-----ChhhHH---HHhh-c-C---------CC----
Q 024230          171 SATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG-----NGKFVD---EVKS-R-T---------PM----  227 (270)
Q Consensus       171 ~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~-----~~~~~~---~~~~-~-~---------~~----  227 (270)
                      +.+|++++.+++.++++  ..++++..+.|+.+..+.......     ......   .... . .         +.    
T Consensus       146 ~~sK~~~e~~~~~~~~~--~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  223 (328)
T TIGR01179       146 GRSKLMSERILRDLSKA--DPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGT  223 (328)
T ss_pred             HHHHHHHHHHHHHHHHh--ccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCc
Confidence            99999999999998765  247899999998777763322111     111111   1110 0 0         11    


Q ss_pred             --CCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCcccc
Q 024230          228 --GRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       228 --~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                        ..+...+|+++++..++........|+++++.+|..+.
T Consensus       224 ~~~~~v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~~s  263 (328)
T TIGR01179       224 CVRDYIHVMDLADAHLAALEYLLNGGESHVYNLGYGQGFS  263 (328)
T ss_pred             eEEeeeeHHHHHHHHHHHHhhhhcCCCcceEEcCCCCccc
Confidence              12456899999998888542223457889998776554

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.77  E-value=4.2e-17  Score=139.85  Aligned_cols=224  Identities=18%  Similarity=0.154  Sum_probs=158.9

Q ss_pred             EEecCCCcHHHHHHHHHHHCC--CeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcccE
Q 024230           24 LVTGGTKGLGLAVVEELSMLG--ATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNI  101 (270)
Q Consensus        24 lItG~s~giG~~la~~l~~~G--~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~  101 (270)
                      |||||+|.+|.+++++|+++|  ++|.++++.+....  ....... ....++.+|++|.+++.+++        ...|+
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~--~~~~~~~-~~~~~~~~Di~d~~~l~~a~--------~g~d~   69 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKF--LKDLQKS-GVKEYIQGDITDPESLEEAL--------EGVDV   69 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEccccccccc--chhhhcc-cceeEEEeccccHHHHHHHh--------cCCce
Confidence            699999999999999999999  78999988776432  1122221 22338999999999999888        56899


Q ss_pred             EEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccccc---C--------------
Q 024230          102 FVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVS---A--------------  164 (270)
Q Consensus       102 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~---~--------------  164 (270)
                      +||+|+......     ....++.+++|+.|+.++++++.    +.+..++|++||..+..+   .              
T Consensus        70 V~H~Aa~~~~~~-----~~~~~~~~~vNV~GT~nvl~aa~----~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~  140 (280)
T PF01073_consen   70 VFHTAAPVPPWG-----DYPPEEYYKVNVDGTRNVLEAAR----KAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPS  140 (280)
T ss_pred             EEEeCccccccC-----cccHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccc
Confidence            999999754432     23356789999999999999884    456779999999987654   1              


Q ss_pred             CCChhhhhhHHHHHHHHHHHHH-HHc-cCCceEEEEecCcccCCCCccccCChhhHHHHhhc---CC------CCCCCCh
Q 024230          165 NVGTVYSATKGAMNQLAKNLAC-EWA-KDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSR---TP------MGRLGEP  233 (270)
Q Consensus       165 ~~~~~y~~sKaal~~~~~sla~-el~-~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~---~~------~~~~~~~  233 (270)
                      .....|+.||+..|.++..... ++. ...++..+|.|..|..|.-..+..  ...+.....   ..      ...+..+
T Consensus       141 ~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~--~~~~~~~~g~~~~~~g~~~~~~~~vyV  218 (280)
T PF01073_consen  141 SPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVP--RLVKMVRSGLFLFQIGDGNNLFDFVYV  218 (280)
T ss_pred             cccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccc--hhhHHHHhcccceeecCCCceECcEeH
Confidence            1234799999999999987664 111 124899999999888875433322  112211111   11      1224468


Q ss_pred             HhHHHHHHHHhCC---C--CCCccCcEEeecCCcccc-cccc
Q 024230          234 KEVSSLVAFLCMP---A--ASYITGQTVCIDGGFTVN-GFFF  269 (270)
Q Consensus       234 ~dva~~~~~l~s~---~--~~~~~G~~i~vdgG~~~~-~~~~  269 (270)
                      +++|.+.+-.+..   .  ...+.||.+.+..|..+. ..+|
T Consensus       219 ~NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~p~~~~~~f  260 (280)
T PF01073_consen  219 ENVAHAHVLAAQALLEPGKPERVAGQAYFITDGEPVPSFWDF  260 (280)
T ss_pred             HHHHHHHHHHHHHhccccccccCCCcEEEEECCCccCcHHHH
Confidence            9999988654431   2  466899999999998887 4344

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.76  E-value=1e-16  Score=133.37  Aligned_cols=223  Identities=16%  Similarity=0.113  Sum_probs=160.0

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCC--eEEEeeCChhH--HHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTETE--LNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~--~v~l~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      +++|||||+|.||..+++++.++.-  +|+.++.-.-.  .+.+ +.+. ...+..+++.|++|.+.+.+++++      
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l-~~~~-~~~~~~fv~~DI~D~~~v~~~~~~------   72 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENL-ADVE-DSPRYRFVQGDICDRELVDRLFKE------   72 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHH-Hhhh-cCCCceEEeccccCHHHHHHHHHh------
Confidence            5799999999999999999999975  36666652211  1111 1221 235899999999999998888865      


Q ss_pred             CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccccc-------------
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVS-------------  163 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~-------------  163 (270)
                      .++|.++|-|+-.+.    +.+..+-+..+++|+.|++.+++++..+..+   -+++.||...-+..             
T Consensus        73 ~~~D~VvhfAAESHV----DRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~---frf~HISTDEVYG~l~~~~~~FtE~tp  145 (340)
T COG1088          73 YQPDAVVHFAAESHV----DRSIDGPAPFIQTNVVGTYTLLEAARKYWGK---FRFHHISTDEVYGDLGLDDDAFTETTP  145 (340)
T ss_pred             cCCCeEEEechhccc----cccccChhhhhhcchHHHHHHHHHHHHhccc---ceEEEeccccccccccCCCCCcccCCC
Confidence            489999999987553    2355555677999999999999999554422   37888988754322             


Q ss_pred             CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCC---------CCCCChH
Q 024230          164 ANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPM---------GRLGEPK  234 (270)
Q Consensus       164 ~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~  234 (270)
                      ....+.|++|||+-+.|+|++.+-+   |+.+....|..-..|..-+-+-.+..+.......+.         +.+...+
T Consensus       146 ~~PsSPYSASKAasD~lVray~~TY---glp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~Ve  222 (340)
T COG1088         146 YNPSSPYSASKAASDLLVRAYVRTY---GLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVE  222 (340)
T ss_pred             CCCCCCcchhhhhHHHHHHHHHHHc---CCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeH
Confidence            2345789999999999999998874   788888888777776654443334444333333332         3344589


Q ss_pred             hHHHHHHHHhCCCCCCccCcEEeecCCccc
Q 024230          235 EVSSLVAFLCMPAASYITGQTVCIDGGFTV  264 (270)
Q Consensus       235 dva~~~~~l~s~~~~~~~G~~i~vdgG~~~  264 (270)
                      |=++++..++..   ..-|++++|.||.-.
T Consensus       223 Dh~~ai~~Vl~k---g~~GE~YNIgg~~E~  249 (340)
T COG1088         223 DHCRAIDLVLTK---GKIGETYNIGGGNER  249 (340)
T ss_pred             hHHHHHHHHHhc---CcCCceEEeCCCccc
Confidence            999999888844   234999999998754

>PLN02427 UDP-apiose/xylose synthase

Probab=99.76  E-value=5.5e-17  Score=145.54  Aligned_cols=225  Identities=12%  Similarity=0.102  Sum_probs=151.2

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHC-CCeEEEeeCChhHHHHHHHHHH-hcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSML-GATVHTCSRTETELNECIHHLQ-MKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~-G~~v~l~~r~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      -.++.|+||||||+|.||++++++|+++ |++|++++|+.+.......... ....++.++.+|++|.+.+.+++     
T Consensus        10 ~~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~-----   84 (386)
T PLN02427         10 KPIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLI-----   84 (386)
T ss_pred             CcccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHh-----
Confidence            3456678999999999999999999999 5899999987655433221100 01235888999999998877766     


Q ss_pred             HcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC---------
Q 024230           94 LFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA---------  164 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~---------  164 (270)
                         ..+|++||+|+......... +   -.+.+..|+.+..++++++.    +.+ .++|++||...+...         
T Consensus        85 ---~~~d~ViHlAa~~~~~~~~~-~---~~~~~~~n~~gt~~ll~aa~----~~~-~r~v~~SS~~vYg~~~~~~~~e~~  152 (386)
T PLN02427         85 ---KMADLTINLAAICTPADYNT-R---PLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPKDH  152 (386)
T ss_pred             ---hcCCEEEEcccccChhhhhh-C---hHHHHHHHHHHHHHHHHHHH----hcC-CEEEEEeeeeeeCCCcCCCCCccc
Confidence               34799999999754322111 1   22446689999999988773    333 589999997543211         


Q ss_pred             C------------------------CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCcccc-------C
Q 024230          165 N------------------------VGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLL-------G  213 (270)
Q Consensus       165 ~------------------------~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~-------~  213 (270)
                      |                        ....|+.||.+.+.+++.++..   .++++..+.|+.+..+......       .
T Consensus       153 p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~  229 (386)
T PLN02427        153 PLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEG  229 (386)
T ss_pred             ccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh---cCCceEEecccceeCCCCCccccccccccc
Confidence            0                        0136999999999999876543   5899999999999887432110       0


Q ss_pred             ChhhH----HHHhhcCC---------CCCCCChHhHHHHHHHHhCCCCCCccCcEEeecCC
Q 024230          214 NGKFV----DEVKSRTP---------MGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGG  261 (270)
Q Consensus       214 ~~~~~----~~~~~~~~---------~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG  261 (270)
                      .....    .......+         ...+...+|++++++.++... ....|+++++.+|
T Consensus       230 ~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~-~~~~g~~yni~~~  289 (386)
T PLN02427        230 VPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENP-ARANGHIFNVGNP  289 (386)
T ss_pred             cchHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCc-ccccCceEEeCCC
Confidence            01111    12222221         123567999999998887532 1246789999876

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.75  E-value=1e-16  Score=133.70  Aligned_cols=212  Identities=19%  Similarity=0.217  Sum_probs=155.9

Q ss_pred             EEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcccEE
Q 024230           23 ALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIF  102 (270)
Q Consensus        23 vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~l  102 (270)
                      ||||||+|.||.+++++|.++|+.|+.+.|+...........     ++.++.+|+.+.++++++++..      ++|.+
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~dl~~~~~~~~~~~~~------~~d~v   69 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL-----NVEFVIGDLTDKEQLEKLLEKA------NIDVV   69 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT-----TEEEEESETTSHHHHHHHHHHH------TESEE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc-----eEEEEEeecccccccccccccc------CceEE
Confidence            799999999999999999999999888888777543322221     6889999999999999999763      78999


Q ss_pred             EECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCC-----------CChhhh
Q 024230          103 VNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSAN-----------VGTVYS  171 (270)
Q Consensus       103 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~-----------~~~~y~  171 (270)
                      ||+|+....    ..+.+...+.++.|+.+..++++++    .+.+..++|++||...+....           ....|+
T Consensus        70 i~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~  141 (236)
T PF01370_consen   70 IHLAAFSSN----PESFEDPEEIIEANVQGTRNLLEAA----REAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYG  141 (236)
T ss_dssp             EEEBSSSSH----HHHHHSHHHHHHHHHHHHHHHHHHH----HHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHH
T ss_pred             EEeeccccc----ccccccccccccccccccccccccc----cccccccccccccccccccccccccccccccccccccc
Confidence            999987431    1123456778889999999998888    445557999999976544331           234699


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCC---CccccCChhhHHHHhhcCCC---------CCCCChHhHHHH
Q 024230          172 ATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPF---TEPLLGNGKFVDEVKSRTPM---------GRLGEPKEVSSL  239 (270)
Q Consensus       172 ~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~---~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~  239 (270)
                      .+|...+.+.+.+.+..   ++++..+.|+.+..+.   .....-.+..........+.         ..+...+|++++
T Consensus       142 ~~K~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  218 (236)
T PF01370_consen  142 ASKRAAEELLRDYAKKY---GLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEA  218 (236)
T ss_dssp             HHHHHHHHHHHHHHHHH---TSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHH
T ss_pred             ccccccccccccccccc---ccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHH
Confidence            99999999999987764   8999999999998886   11110012333333332211         223458999999


Q ss_pred             HHHHhCCCCCCccCcEEee
Q 024230          240 VAFLCMPAASYITGQTVCI  258 (270)
Q Consensus       240 ~~~l~s~~~~~~~G~~i~v  258 (270)
                      +++++....  ..|++++|
T Consensus       219 ~~~~~~~~~--~~~~~yNi  235 (236)
T PF01370_consen  219 IVAALENPK--AAGGIYNI  235 (236)
T ss_dssp             HHHHHHHSC--TTTEEEEE
T ss_pred             HHHHHhCCC--CCCCEEEe
Confidence            999997543  67888876

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.74  E-value=3.7e-16  Score=140.16  Aligned_cols=214  Identities=16%  Similarity=0.146  Sum_probs=147.6

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHH--HHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNE--CIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      ..++++|+||||+|.||++++++|+++|++|++++|+......  ...+.......+.++.+|++|.+++.++++.+   
T Consensus        57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~---  133 (390)
T PLN02657         57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE---  133 (390)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh---
Confidence            4577899999999999999999999999999999998765321  11112222235788999999999998888643   


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                       ..++|++|||++.....         ..+.+++|+.+..++++++    ++.+.+++|++||.....+   ...|..+|
T Consensus       134 -~~~~D~Vi~~aa~~~~~---------~~~~~~vn~~~~~~ll~aa----~~~gv~r~V~iSS~~v~~p---~~~~~~sK  196 (390)
T PLN02657        134 -GDPVDVVVSCLASRTGG---------VKDSWKIDYQATKNSLDAG----REVGAKHFVLLSAICVQKP---LLEFQRAK  196 (390)
T ss_pred             -CCCCcEEEECCccCCCC---------CccchhhHHHHHHHHHHHH----HHcCCCEEEEEeeccccCc---chHHHHHH
Confidence             12799999998853211         1133567888888887776    4555678999999876533   34688899


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCC----------CCCCCChHhHHHHHHHHh
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTP----------MGRLGEPKEVSSLVAFLC  244 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~dva~~~~~l~  244 (270)
                      ...+...+.     ...++++..+.|+.+..++..       ..+......+          .......+|+|+.+..++
T Consensus       197 ~~~E~~l~~-----~~~gl~~tIlRp~~~~~~~~~-------~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~  264 (390)
T PLN02657        197 LKFEAELQA-----LDSDFTYSIVRPTAFFKSLGG-------QVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCV  264 (390)
T ss_pred             HHHHHHHHh-----ccCCCCEEEEccHHHhcccHH-------HHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHH
Confidence            888877654     246899999999876543221       1111111111          112357899999998888


Q ss_pred             CCCCCCccCcEEeecC-Cccc
Q 024230          245 MPAASYITGQTVCIDG-GFTV  264 (270)
Q Consensus       245 s~~~~~~~G~~i~vdg-G~~~  264 (270)
                      .+.  ...|+++++.| |..+
T Consensus       265 ~~~--~~~~~~~~Iggp~~~~  283 (390)
T PLN02657        265 LDE--SKINKVLPIGGPGKAL  283 (390)
T ss_pred             hCc--cccCCEEEcCCCCccc
Confidence            532  23578999976 4443

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.73  E-value=1.4e-15  Score=134.58  Aligned_cols=216  Identities=11%  Similarity=0.111  Sum_probs=146.9

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHC-CCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCC-CHHHHHHHHHHHHHHcCCc
Q 024230           21 MTALVTGGTKGLGLAVVEELSML-GATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVS-SRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~-G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~i~~~~~~~   98 (270)
                      |+|+||||+|.||.+++++|+++ |++|++++|+.+.....   +.  ...+.++.+|++ +.+.+.+++        .+
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~---~~--~~~~~~~~~Dl~~~~~~~~~~~--------~~   68 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDL---VN--HPRMHFFEGDITINKEWIEYHV--------KK   68 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHh---cc--CCCeEEEeCCCCCCHHHHHHHH--------cC
Confidence            57999999999999999999987 69999999876543221   11  235788899998 555554444        46


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC--------------
Q 024230           99 LNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA--------------  164 (270)
Q Consensus        99 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~--------------  164 (270)
                      +|++||+|+.......    .++.+..+++|+.++.++++++.    +.+ .++|++||...+...              
T Consensus        69 ~d~ViH~aa~~~~~~~----~~~p~~~~~~n~~~~~~ll~aa~----~~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~  139 (347)
T PRK11908         69 CDVILPLVAIATPATY----VKQPLRVFELDFEANLPIVRSAV----KYG-KHLVFPSTSEVYGMCPDEEFDPEASPLVY  139 (347)
T ss_pred             CCEEEECcccCChHHh----hcCcHHHHHHHHHHHHHHHHHHH----hcC-CeEEEEecceeeccCCCcCcCcccccccc
Confidence            8999999997433211    12234668999999999988874    343 589999997544211              


Q ss_pred             ----CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC----C----hhhHHHHhhcC-------
Q 024230          165 ----NVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG----N----GKFVDEVKSRT-------  225 (270)
Q Consensus       165 ----~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~----~----~~~~~~~~~~~-------  225 (270)
                          +....|+.||.+.+.+.+.++..   .++.+..+.|+.+..+.......    .    ......+....       
T Consensus       140 ~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  216 (347)
T PRK11908        140 GPINKPRWIYACSKQLMDRVIWAYGME---EGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDG  216 (347)
T ss_pred             CcCCCccchHHHHHHHHHHHHHHHHHH---cCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecC
Confidence                01126999999999999887654   47888889998777664322110    0    11222221111       


Q ss_pred             --CCCCCCChHhHHHHHHHHhCCCCCCccCcEEeecCC
Q 024230          226 --PMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGG  261 (270)
Q Consensus       226 --~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG  261 (270)
                        ..+.+...+|++++++.++........|+++++.++
T Consensus       217 g~~~r~~i~v~D~a~a~~~~~~~~~~~~~g~~yni~~~  254 (347)
T PRK11908        217 GSQKRAFTDIDDGIDALMKIIENKDGVASGKIYNIGNP  254 (347)
T ss_pred             CceeeccccHHHHHHHHHHHHhCccccCCCCeEEeCCC
Confidence              123467899999999998865332346889999875

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.72  E-value=9.6e-16  Score=146.67  Aligned_cols=227  Identities=12%  Similarity=0.048  Sum_probs=154.0

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHC--CCeEEEeeCCh--hHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSML--GATVHTCSRTE--TELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~--G~~v~l~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      ..++|+||||||+|.||++++++|+++  |++|+.++|..  +....+...  ....++.++.+|++|.+.++.++..  
T Consensus         3 ~~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~--~~~~~v~~~~~Dl~d~~~~~~~~~~--   78 (668)
T PLN02260          3 TYEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPS--KSSPNFKFVKGDIASADLVNYLLIT--   78 (668)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhc--ccCCCeEEEECCCCChHHHHHHHhh--
Confidence            346789999999999999999999998  67899888753  122111110  1134688899999998877665432  


Q ss_pred             HHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCccccccC-------
Q 024230           93 SLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIVSA-------  164 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~~~~~~-------  164 (270)
                          .++|++||+|+......    ...+..+.+++|+.++.++++++    ++.+ ..++|++||...+...       
T Consensus        79 ----~~~D~ViHlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~vkr~I~~SS~~vyg~~~~~~~~~  146 (668)
T PLN02260         79 ----EGIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDEVYGETDEDADVG  146 (668)
T ss_pred             ----cCCCEEEECCCccCchh----hhhCHHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEcchHHhCCCccccccC
Confidence                47999999999754221    12233467899999999998887    3333 4689999997644221       


Q ss_pred             -------CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCC---------CC
Q 024230          165 -------NVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTP---------MG  228 (270)
Q Consensus       165 -------~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~  228 (270)
                             .....|+.+|.+.+.+++.++.+   .++++..+.|+.+..+-.....-.+.+........+         ..
T Consensus       147 ~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~---~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r  223 (668)
T PLN02260        147 NHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVR  223 (668)
T ss_pred             ccccCCCCCCCCcHHHHHHHHHHHHHHHHH---cCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceE
Confidence                   12346999999999999987765   478899999998887643211001112222221111         12


Q ss_pred             CCCChHhHHHHHHHHhCCCCCCccCcEEeecCCcccc
Q 024230          229 RLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       229 ~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                      .+...+|+++++..++...   ..|+++++.++..+.
T Consensus       224 ~~ihV~Dva~a~~~~l~~~---~~~~vyni~~~~~~s  257 (668)
T PLN02260        224 SYLYCEDVAEAFEVVLHKG---EVGHVYNIGTKKERR  257 (668)
T ss_pred             eeEEHHHHHHHHHHHHhcC---CCCCEEEECCCCeeE
Confidence            3456999999998887432   357899998876553

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.71  E-value=1.7e-15  Score=144.58  Aligned_cols=221  Identities=13%  Similarity=0.083  Sum_probs=151.3

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHC-CCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHH-HHHHHHHHHHH
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSML-GATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQ-RQTLINTVSSL   94 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~-G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~i~~~   94 (270)
                      ..++|+|+||||+|.||.+++++|+++ |++|+.++|........   + . ..++.++.+|++|.++ +++++      
T Consensus       312 ~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~---~-~-~~~~~~~~gDl~d~~~~l~~~l------  380 (660)
T PRK08125        312 AKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRF---L-G-HPRFHFVEGDISIHSEWIEYHI------  380 (660)
T ss_pred             hhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhh---c-C-CCceEEEeccccCcHHHHHHHh------
Confidence            346789999999999999999999986 79999999976543221   1 1 2357788999998654 33333      


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC----------
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA----------  164 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~----------  164 (270)
                        ..+|++||+|+........    ++.++.+++|+.++.++++++.    +.+ .++|++||...+...          
T Consensus       381 --~~~D~ViHlAa~~~~~~~~----~~~~~~~~~Nv~~t~~ll~a~~----~~~-~~~V~~SS~~vyg~~~~~~~~E~~~  449 (660)
T PRK08125        381 --KKCDVVLPLVAIATPIEYT----RNPLRVFELDFEENLKIIRYCV----KYN-KRIIFPSTSEVYGMCTDKYFDEDTS  449 (660)
T ss_pred             --cCCCEEEECccccCchhhc----cCHHHHHHhhHHHHHHHHHHHH----hcC-CeEEEEcchhhcCCCCCCCcCcccc
Confidence              4689999999975432211    1234578899999999998885    333 589999997544210          


Q ss_pred             -----C---CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC--------ChhhHHHHhhcCC--
Q 024230          165 -----N---VGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG--------NGKFVDEVKSRTP--  226 (270)
Q Consensus       165 -----~---~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~--------~~~~~~~~~~~~~--  226 (270)
                           +   ....|+.||.+.+.+++.++++   .|+++..+.|+.+..+.......        .......+....+  
T Consensus       450 ~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~  526 (660)
T PRK08125        450 NLIVGPINKQRWIYSVSKQLLDRVIWAYGEK---EGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIK  526 (660)
T ss_pred             ccccCCCCCCccchHHHHHHHHHHHHHHHHh---cCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeE
Confidence                 1   1136999999999999988665   47899999999888764322110        0112222221111  


Q ss_pred             -------CCCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCc
Q 024230          227 -------MGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGF  262 (270)
Q Consensus       227 -------~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~  262 (270)
                             .+.+...+|++++++.++........|+++++.+|.
T Consensus       527 ~~g~g~~~rd~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~  569 (660)
T PRK08125        527 LVDGGKQKRCFTDIRDGIEALFRIIENKDNRCDGQIINIGNPD  569 (660)
T ss_pred             EeCCCceeeceeeHHHHHHHHHHHHhccccccCCeEEEcCCCC
Confidence                   123567999999998887543223468899998874

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.70  E-value=8.3e-16  Score=137.14  Aligned_cols=219  Identities=16%  Similarity=0.082  Sum_probs=148.5

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      ++|+|+||||+|.||.+++++|.++|++|++++|......      ........++.+|+++.+++..++        .+
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~------~~~~~~~~~~~~Dl~d~~~~~~~~--------~~   85 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHM------SEDMFCHEFHLVDLRVMENCLKVT--------KG   85 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccc------ccccccceEEECCCCCHHHHHHHH--------hC
Confidence            7799999999999999999999999999999998653211      111112456789999987766555        46


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccc----------------
Q 024230           99 LNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIV----------------  162 (270)
Q Consensus        99 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~----------------  162 (270)
                      +|++||+|+..........+   ....+..|+.++.++++++    ++.+..++|++||...+.                
T Consensus        86 ~D~Vih~Aa~~~~~~~~~~~---~~~~~~~N~~~t~nll~aa----~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~  158 (370)
T PLN02695         86 VDHVFNLAADMGGMGFIQSN---HSVIMYNNTMISFNMLEAA----RINGVKRFFYASSACIYPEFKQLETNVSLKESDA  158 (370)
T ss_pred             CCEEEEcccccCCccccccC---chhhHHHHHHHHHHHHHHH----HHhCCCEEEEeCchhhcCCccccCcCCCcCcccC
Confidence            89999999865322221112   2345678999999998887    444456899999975332                


Q ss_pred             -cCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC----ChhhHHHHhhc-CC---------C
Q 024230          163 -SANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG----NGKFVDEVKSR-TP---------M  227 (270)
Q Consensus       163 -~~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~-~~---------~  227 (270)
                       +......|+.+|.+.+.+++.++..   .++++..+.|+.+..+.......    ...+....... .+         .
T Consensus       159 ~p~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~  235 (370)
T PLN02695        159 WPAEPQDAYGLEKLATEELCKHYTKD---FGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQT  235 (370)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeE
Confidence             1123457999999999999887654   48999999999888874321100    01122211110 11         1


Q ss_pred             CCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCcccc
Q 024230          228 GRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       228 ~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                      ..+...+|++++++.++...    .++.+++.+|..++
T Consensus       236 r~~i~v~D~a~ai~~~~~~~----~~~~~nv~~~~~~s  269 (370)
T PLN02695        236 RSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVS  269 (370)
T ss_pred             EeEEeHHHHHHHHHHHHhcc----CCCceEecCCCcee
Confidence            22457899999999887542    25778888876543

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=99.70  E-value=5.3e-15  Score=112.70  Aligned_cols=219  Identities=18%  Similarity=0.140  Sum_probs=166.1

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC-C
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN-G   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~-~   97 (270)
                      +-.+|+|.||-|.+|.++...|..++|.|.-++-.+++..          +.-..+..|-+-.++-+.+++++-+.+. .
T Consensus         2 sagrVivYGGkGALGSacv~~FkannywV~siDl~eNe~A----------d~sI~V~~~~swtEQe~~v~~~vg~sL~ge   71 (236)
T KOG4022|consen    2 SAGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQA----------DSSILVDGNKSWTEQEQSVLEQVGSSLQGE   71 (236)
T ss_pred             CCceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccc----------cceEEecCCcchhHHHHHHHHHHHHhhccc
Confidence            4568999999999999999999999999988887665432          2234455666667777888888877665 4


Q ss_pred             cccEEEECCCCCCCCCCCCCC-HHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHH
Q 024230           98 KLNIFVNNVGTSVLKPTLEYN-AEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGA  176 (270)
Q Consensus        98 ~id~li~~ag~~~~~~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaa  176 (270)
                      ++|.+++.||.+.-+.-...+ ...-+-++.-.+....+-.+.+..+++.  +|-+-..+.-++..+.|+.-.|+++|+|
T Consensus        72 kvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~--GGLL~LtGAkaAl~gTPgMIGYGMAKaA  149 (236)
T KOG4022|consen   72 KVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKP--GGLLQLTGAKAALGGTPGMIGYGMAKAA  149 (236)
T ss_pred             ccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCC--CceeeecccccccCCCCcccchhHHHHH
Confidence            799999999986544332111 1122334555555555555555444433  4667777777889999999999999999


Q ss_pred             HHHHHHHHHHHHc--cCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCc
Q 024230          177 MNQLAKNLACEWA--KDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ  254 (270)
Q Consensus       177 l~~~~~sla~el~--~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  254 (270)
                      +.+++++|+.+-.  +.|--+..|.|-..+|||.+.|+++.++          ....+.+.+++.++.+..+.++--+|.
T Consensus       150 VHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~ADf----------ssWTPL~fi~e~flkWtt~~~RPssGs  219 (236)
T KOG4022|consen  150 VHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPNADF----------SSWTPLSFISEHFLKWTTETSRPSSGS  219 (236)
T ss_pred             HHHHHHHhcccccCCCCCceeEEEeeeeccCccccccCCCCcc----------cCcccHHHHHHHHHHHhccCCCCCCCc
Confidence            9999999998764  5677888999999999999999877554          335578999999999999888888998


Q ss_pred             EEeec
Q 024230          255 TVCID  259 (270)
Q Consensus       255 ~i~vd  259 (270)
                      .+.+-
T Consensus       220 Llqi~  224 (236)
T KOG4022|consen  220 LLQIT  224 (236)
T ss_pred             eEEEE
Confidence            88764

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.69  E-value=2.9e-15  Score=130.16  Aligned_cols=212  Identities=21%  Similarity=0.255  Sum_probs=147.2

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc-c
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL-N  100 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i-d  100 (270)
                      .|||||++|.||.+++++|.++|++|+.++|.........       ..+.++.+|+++.+.+.+.++        .. |
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~--------~~~d   66 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-------SGVEFVVLDLTDRDLVDELAK--------GVPD   66 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc-------cccceeeecccchHHHHHHHh--------cCCC
Confidence            4999999999999999999999999999999777643321       356778899998855544442        23 9


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC-----------CCCh-
Q 024230          101 IFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA-----------NVGT-  168 (270)
Q Consensus       101 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~-----------~~~~-  168 (270)
                      .+||+|+......... +  +..+.+.+|+.++.++++++.    +.+..++|+.||...+.+.           +..+ 
T Consensus        67 ~vih~aa~~~~~~~~~-~--~~~~~~~~nv~gt~~ll~aa~----~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~  139 (314)
T COG0451          67 AVIHLAAQSSVPDSNA-S--DPAEFLDVNVDGTLNLLEAAR----AAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPL  139 (314)
T ss_pred             EEEEccccCchhhhhh-h--CHHHHHHHHHHHHHHHHHHHH----HcCCCeEEEeCCCceECCCCCCCCcccccCCCCCC
Confidence            9999999865322111 1  345689999999999999994    4556688886664543322           1112 


Q ss_pred             -hhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC---hhhHHHHhhcCC---C-------CCCCChH
Q 024230          169 -VYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN---GKFVDEVKSRTP---M-------GRLGEPK  234 (270)
Q Consensus       169 -~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~---~~~~~~~~~~~~---~-------~~~~~~~  234 (270)
                       .|+.+|.+.+.+++..+.   ..++.+..+.|+.+..+........   ...........+   .       ..+...+
T Consensus       140 ~~Yg~sK~~~E~~~~~~~~---~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  216 (314)
T COG0451         140 NPYGVSKLAAEQLLRAYAR---LYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVD  216 (314)
T ss_pred             CHHHHHHHHHHHHHHHHHH---HhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHH
Confidence             499999999999999887   5689999999998877654443111   111111222222   1       1245589


Q ss_pred             hHHHHHHHHhCCCCCCccCcEEeecCCc
Q 024230          235 EVSSLVAFLCMPAASYITGQTVCIDGGF  262 (270)
Q Consensus       235 dva~~~~~l~s~~~~~~~G~~i~vdgG~  262 (270)
                      |+++++..++....   .+ .+++.++.
T Consensus       217 D~a~~~~~~~~~~~---~~-~~ni~~~~  240 (314)
T COG0451         217 DVADALLLALENPD---GG-VFNIGSGT  240 (314)
T ss_pred             HHHHHHHHHHhCCC---Cc-EEEeCCCC
Confidence            99999999996432   22 88887764

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.69  E-value=4.2e-15  Score=129.29  Aligned_cols=214  Identities=14%  Similarity=0.150  Sum_probs=139.3

Q ss_pred             EEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH--HcCCccc
Q 024230           23 ALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS--LFNGKLN  100 (270)
Q Consensus        23 vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~--~~~~~id  100 (270)
                      |+||||+|.||.+++++|+++|++++++.|+....... ..         ...+|+.|..+.+++++.+..  .+ +++|
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-~~---------~~~~~~~d~~~~~~~~~~~~~~~~~-~~~d   70 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-VN---------LVDLDIADYMDKEDFLAQIMAGDDF-GDIE   70 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-Hh---------hhhhhhhhhhhHHHHHHHHhccccc-CCcc
Confidence            79999999999999999999999766655543322111 01         123566666555555554432  12 4799


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC-----------CCChh
Q 024230          101 IFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA-----------NVGTV  169 (270)
Q Consensus       101 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~-----------~~~~~  169 (270)
                      ++||+|+.....   ..+.   +..++.|+.++.++++++.    +.+. ++|++||...+...           .....
T Consensus        71 ~Vih~A~~~~~~---~~~~---~~~~~~n~~~t~~ll~~~~----~~~~-~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~  139 (308)
T PRK11150         71 AIFHEGACSSTT---EWDG---KYMMDNNYQYSKELLHYCL----EREI-PFLYASSAATYGGRTDDFIEEREYEKPLNV  139 (308)
T ss_pred             EEEECceecCCc---CCCh---HHHHHHHHHHHHHHHHHHH----HcCC-cEEEEcchHHhCcCCCCCCccCCCCCCCCH
Confidence            999999865432   1222   3468999999999988884    3443 69999998654321           12357


Q ss_pred             hhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCCh----hhHHHHhhcC-C---------CCCCCChHh
Q 024230          170 YSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNG----KFVDEVKSRT-P---------MGRLGEPKE  235 (270)
Q Consensus       170 y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~----~~~~~~~~~~-~---------~~~~~~~~d  235 (270)
                      |+.+|.+.+.+++.++.+   .++++..+.|+.+..+....-....    .+...+.... +         .+.+...+|
T Consensus       140 Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D  216 (308)
T PRK11150        140 YGYSKFLFDEYVRQILPE---ANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGD  216 (308)
T ss_pred             HHHHHHHHHHHHHHHHHH---cCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHH
Confidence            999999999999887654   4788999999888876432211111    1112222111 1         123467999


Q ss_pred             HHHHHHHHhCCCCCCccCcEEeecCCcccc
Q 024230          236 VSSLVAFLCMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       236 va~~~~~l~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                      ++++++.++...    .+.++++.+|..++
T Consensus       217 ~a~a~~~~~~~~----~~~~yni~~~~~~s  242 (308)
T PRK11150        217 VAAVNLWFWENG----VSGIFNCGTGRAES  242 (308)
T ss_pred             HHHHHHHHHhcC----CCCeEEcCCCCcee
Confidence            999988877542    25699998887654

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.67  E-value=8.4e-15  Score=125.98  Aligned_cols=198  Identities=17%  Similarity=0.127  Sum_probs=137.8

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcccE
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNI  101 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~  101 (270)
                      +|+||||+|.||++++++|.++|++|++++|+                     .+|+.+.++++++++.      .++|+
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~---------------------~~d~~~~~~~~~~~~~------~~~d~   53 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS---------------------QLDLTDPEALERLLRA------IRPDA   53 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc---------------------ccCCCCHHHHHHHHHh------CCCCE
Confidence            48999999999999999999999999999885                     3799999988888754      36899


Q ss_pred             EEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC-----------CCChhh
Q 024230          102 FVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA-----------NVGTVY  170 (270)
Q Consensus       102 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~-----------~~~~~y  170 (270)
                      +||+++......    ........+++|+.++.++++++.    +.+ .++|++||...+.+.           .....|
T Consensus        54 vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y  124 (287)
T TIGR01214        54 VVNTAAYTDVDG----AESDPEKAFAVNALAPQNLARAAA----RHG-ARLVHISTDYVFDGEGKRPYREDDATNPLNVY  124 (287)
T ss_pred             EEECCccccccc----cccCHHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEeeeeeecCCCCCCCCCCCCCCCcchh
Confidence            999999753211    122345678999999999998873    333 479999987543221           123579


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCc-cccCChhhHHHHhhcCC-------CCCCCChHhHHHHHHH
Q 024230          171 SATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTE-PLLGNGKFVDEVKSRTP-------MGRLGEPKEVSSLVAF  242 (270)
Q Consensus       171 ~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~-~~~~~~~~~~~~~~~~~-------~~~~~~~~dva~~~~~  242 (270)
                      +.+|.+.+.+++.+       +.++..+.|+.+..+... .+  ............+       .......+|+++++..
T Consensus       125 ~~~K~~~E~~~~~~-------~~~~~ilR~~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~  195 (287)
T TIGR01214       125 GQSKLAGEQAIRAA-------GPNALIVRTSWLYGGGGGRNF--VRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAA  195 (287)
T ss_pred             hHHHHHHHHHHHHh-------CCCeEEEEeeecccCCCCCCH--HHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHHH
Confidence            99999999888765       457889999988876421 11  0111221111111       1234568999999998


Q ss_pred             HhCCCCCCccCcEEeecCCccccc
Q 024230          243 LCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       243 l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                      ++...  ..-++++++-++..+..
T Consensus       196 ~~~~~--~~~~~~~ni~~~~~~s~  217 (287)
T TIGR01214       196 LLQRL--ARARGVYHLANSGQCSW  217 (287)
T ss_pred             HHhhc--cCCCCeEEEECCCCcCH
Confidence            88542  12356777776665543

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.66  E-value=1e-14  Score=126.95  Aligned_cols=216  Identities=15%  Similarity=0.120  Sum_probs=142.1

Q ss_pred             EEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcccE
Q 024230           23 ALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNI  101 (270)
Q Consensus        23 vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~  101 (270)
                      ||||||+|.||.++++.|.++|+ .|++++|..... .+. ++   .  ...+..|+.+.+.++.+.+.   .+ .++|+
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~-~~---~--~~~~~~d~~~~~~~~~~~~~---~~-~~~D~   69 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFL-NL---A--DLVIADYIDKEDFLDRLEKG---AF-GKIEA   69 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhh-hh---h--heeeeccCcchhHHHHHHhh---cc-CCCCE
Confidence            68999999999999999999998 688887754321 111 11   1  12456778777666555442   23 58999


Q ss_pred             EEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccccc-----------CCCChhh
Q 024230          102 FVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVS-----------ANVGTVY  170 (270)
Q Consensus       102 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~-----------~~~~~~y  170 (270)
                      +||+|+....      +.++.+..+++|+.++.++++++.    +.+ .++|++||...+..           ......|
T Consensus        70 vvh~A~~~~~------~~~~~~~~~~~n~~~~~~ll~~~~----~~~-~~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y  138 (314)
T TIGR02197        70 IFHQGACSDT------TETDGEYMMENNYQYSKRLLDWCA----EKG-IPFIYASSAATYGDGEAGFREGRELERPLNVY  138 (314)
T ss_pred             EEECccccCc------cccchHHHHHHHHHHHHHHHHHHH----HhC-CcEEEEccHHhcCCCCCCcccccCcCCCCCHH
Confidence            9999996432      223456788999999999998874    333 37999999765431           1134579


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCCh----hhHHHHhhcC---------------CCCCCC
Q 024230          171 SATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNG----KFVDEVKSRT---------------PMGRLG  231 (270)
Q Consensus       171 ~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~----~~~~~~~~~~---------------~~~~~~  231 (270)
                      +.+|.+.+.+++....+. ..++++..+.|+.+..+....-....    ..........               ....+.
T Consensus       139 ~~sK~~~e~~~~~~~~~~-~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i  217 (314)
T TIGR02197       139 GYSKFLFDQYVRRRVLPE-ALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFV  217 (314)
T ss_pred             HHHHHHHHHHHHHHhHhh-ccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeE
Confidence            999999999998643321 23577888888877765422110111    1112211111               112356


Q ss_pred             ChHhHHHHHHHHhCCCCCCccCcEEeecCCcccc
Q 024230          232 EPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       232 ~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                      ..+|+++++..++..    ..+.++++.++..+.
T Consensus       218 ~v~D~a~~i~~~~~~----~~~~~yni~~~~~~s  247 (314)
T TIGR02197       218 YVKDVVDVNLWLLEN----GVSGIFNLGTGRARS  247 (314)
T ss_pred             EHHHHHHHHHHHHhc----ccCceEEcCCCCCcc
Confidence            789999999998864    256799998887654

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.66  E-value=5.6e-15  Score=123.57  Aligned_cols=156  Identities=15%  Similarity=0.148  Sum_probs=122.2

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      ++||||||+|-||.+++.+|++.|++|++++.....-.+.....     ...++..|+.|.+-+++++++      .++|
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~-----~~~f~~gDi~D~~~L~~vf~~------~~id   69 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL-----QFKFYEGDLLDRALLTAVFEE------NKID   69 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc-----cCceEEeccccHHHHHHHHHh------cCCC
Confidence            47999999999999999999999999999998766544433322     157899999999998888876      6999


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCC------------CCh
Q 024230          101 IFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSAN------------VGT  168 (270)
Q Consensus       101 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~------------~~~  168 (270)
                      .+||.||....+    .+.++-.+-++-|+.+++.|+++.    .+.+..+|||-||.+- .+.|            ...
T Consensus        70 aViHFAa~~~Vg----ESv~~Pl~Yy~NNv~gTl~Ll~am----~~~gv~~~vFSStAav-YG~p~~~PI~E~~~~~p~N  140 (329)
T COG1087          70 AVVHFAASISVG----ESVQNPLKYYDNNVVGTLNLIEAM----LQTGVKKFIFSSTAAV-YGEPTTSPISETSPLAPIN  140 (329)
T ss_pred             EEEECccccccc----hhhhCHHHHHhhchHhHHHHHHHH----HHhCCCEEEEecchhh-cCCCCCcccCCCCCCCCCC
Confidence            999999986554    466777888999999999997776    6666667777665544 3322            234


Q ss_pred             hhhhhHHHHHHHHHHHHHHHccCCceEEEEe
Q 024230          169 VYSATKGAMNQLAKNLACEWAKDNIRTNSVA  199 (270)
Q Consensus       169 ~y~~sKaal~~~~~sla~el~~~~i~v~~v~  199 (270)
                      .|+.||.+.|.+.+.+++...   .++..+.
T Consensus       141 PYG~sKlm~E~iL~d~~~a~~---~~~v~LR  168 (329)
T COG1087         141 PYGRSKLMSEEILRDAAKANP---FKVVILR  168 (329)
T ss_pred             cchhHHHHHHHHHHHHHHhCC---CcEEEEE
Confidence            799999999999999988753   5555544

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.66  E-value=1.6e-14  Score=131.45  Aligned_cols=219  Identities=16%  Similarity=0.133  Sum_probs=144.8

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHH-HHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETEL-NECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      +.-++|+||||||+|.||++++++|+++|++|++++|..... +.......  ..++.++..|+.+..     +      
T Consensus       115 ~~~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~--~~~~~~i~~D~~~~~-----l------  181 (442)
T PLN02206        115 LKRKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFS--NPNFELIRHDVVEPI-----L------  181 (442)
T ss_pred             cccCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhcc--CCceEEEECCccChh-----h------
Confidence            344779999999999999999999999999999998753221 11111111  234677788886641     1      


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC----------
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA----------  164 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~----------  164 (270)
                        ..+|.+||+|+....... ..+   ..+.+++|+.++.++++++.    +.+ .++|++||...+...          
T Consensus       182 --~~~D~ViHlAa~~~~~~~-~~~---p~~~~~~Nv~gt~nLleaa~----~~g-~r~V~~SS~~VYg~~~~~p~~E~~~  250 (442)
T PLN02206        182 --LEVDQIYHLACPASPVHY-KFN---PVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQVETYW  250 (442)
T ss_pred             --cCCCEEEEeeeecchhhh-hcC---HHHHHHHHHHHHHHHHHHHH----HhC-CEEEEECChHHhCCCCCCCCCcccc
Confidence              358999999987532211 112   35678999999999998884    333 389999998755321          


Q ss_pred             ----C--CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC--ChhhHHHHhhcCC---------C
Q 024230          165 ----N--VGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG--NGKFVDEVKSRTP---------M  227 (270)
Q Consensus       165 ----~--~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~---------~  227 (270)
                          |  ....|+.+|.+.+.+++.+.+.   .++++..+.|+.+..+.......  ...+........+         .
T Consensus       251 ~~~~P~~~~s~Y~~SK~~aE~~~~~y~~~---~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~  327 (442)
T PLN02206        251 GNVNPIGVRSCYDEGKRTAETLTMDYHRG---ANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT  327 (442)
T ss_pred             ccCCCCCccchHHHHHHHHHHHHHHHHHH---hCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEE
Confidence                1  1356999999999998877554   47888888888777653211000  0122222222111         1


Q ss_pred             CCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCcccc
Q 024230          228 GRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       228 ~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                      ..+...+|+++++..++...    .+..+++.+|..+.
T Consensus       328 rdfi~V~Dva~ai~~a~e~~----~~g~yNIgs~~~~s  361 (442)
T PLN02206        328 RSFQFVSDLVEGLMRLMEGE----HVGPFNLGNPGEFT  361 (442)
T ss_pred             EeEEeHHHHHHHHHHHHhcC----CCceEEEcCCCcee
Confidence            12567999999998887432    23479998876554

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.65  E-value=1.2e-14  Score=127.16  Aligned_cols=206  Identities=13%  Similarity=0.041  Sum_probs=138.0

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      ++|+||||+|.||++++++|+++|++|++++|+.+....    +..  ..+.++.+|++|++++..++        ..+|
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~----l~~--~~v~~v~~Dl~d~~~l~~al--------~g~d   66 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASF----LKE--WGAELVYGDLSLPETLPPSF--------KGVT   66 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhh----Hhh--cCCEEEECCCCCHHHHHHHH--------CCCC
Confidence            379999999999999999999999999999998765422    112  24778899999998887776        4689


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHHHHH
Q 024230          101 IFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQL  180 (270)
Q Consensus       101 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal~~~  180 (270)
                      ++||+++....      +   .....++|+.++.++++++    ++.+..++|++||..+...  ....|..+|...+.+
T Consensus        67 ~Vi~~~~~~~~------~---~~~~~~~~~~~~~~l~~aa----~~~gvkr~I~~Ss~~~~~~--~~~~~~~~K~~~e~~  131 (317)
T CHL00194         67 AIIDASTSRPS------D---LYNAKQIDWDGKLALIEAA----KAAKIKRFIFFSILNAEQY--PYIPLMKLKSDIEQK  131 (317)
T ss_pred             EEEECCCCCCC------C---ccchhhhhHHHHHHHHHHH----HHcCCCEEEEecccccccc--CCChHHHHHHHHHHH
Confidence            99998764221      1   1234668888888888877    4555568999998644321  234578888887766


Q ss_pred             HHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHH---HhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEEe
Q 024230          181 AKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDE---VKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVC  257 (270)
Q Consensus       181 ~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~  257 (270)
                      .+       ..++++..+.|+.+...+...+. .+.....   .............+|+++++..++....  -.|++++
T Consensus       132 l~-------~~~l~~tilRp~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~--~~~~~~n  201 (317)
T CHL00194        132 LK-------KSGIPYTIFRLAGFFQGLISQYA-IPILEKQPIWITNESTPISYIDTQDAAKFCLKSLSLPE--TKNKTFP  201 (317)
T ss_pred             HH-------HcCCCeEEEeecHHhhhhhhhhh-hhhccCCceEecCCCCccCccCHHHHHHHHHHHhcCcc--ccCcEEE
Confidence            53       25788999999855433211110 0000000   0000001134567999999988885422  3589999


Q ss_pred             ecCCcccc
Q 024230          258 IDGGFTVN  265 (270)
Q Consensus       258 vdgG~~~~  265 (270)
                      +.|+..++
T Consensus       202 i~g~~~~s  209 (317)
T CHL00194        202 LVGPKSWN  209 (317)
T ss_pred             ecCCCccC
Confidence            99886654

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.65  E-value=1.5e-14  Score=125.41  Aligned_cols=204  Identities=14%  Similarity=0.108  Sum_probs=139.5

Q ss_pred             EEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcccEEE
Q 024230           24 LVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFV  103 (270)
Q Consensus        24 lItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~li  103 (270)
                      |||||+|.||.++++.|+++|++|+++.+.                    ..+|+++.++++++++.      .++|++|
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~--------------------~~~Dl~~~~~l~~~~~~------~~~d~Vi   54 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH--------------------KELDLTRQADVEAFFAK------EKPTYVI   54 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc--------------------ccCCCCCHHHHHHHHhc------cCCCEEE
Confidence            699999999999999999999987766432                    13799999888887754      3689999


Q ss_pred             ECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC-------------CC---C
Q 024230          104 NNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA-------------NV---G  167 (270)
Q Consensus       104 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~-------------~~---~  167 (270)
                      |+|+........   .++..+.++.|+.++..+++++    .+.+..++|++||..-+.+.             +.   .
T Consensus        55 h~A~~~~~~~~~---~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~  127 (306)
T PLN02725         55 LAAAKVGGIHAN---MTYPADFIRENLQIQTNVIDAA----YRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTN  127 (306)
T ss_pred             Eeeeeecccchh---hhCcHHHHHHHhHHHHHHHHHH----HHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCc
Confidence            999974311111   1123456889999999998888    44445689999997543311             11   2


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC----ChhhHHHH----hhc----------CCCCC
Q 024230          168 TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG----NGKFVDEV----KSR----------TPMGR  229 (270)
Q Consensus       168 ~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~----~~~~~~~~----~~~----------~~~~~  229 (270)
                      ..|+.||.+.+.+.+.+.++.   ++++..+.|+.+..+.......    .+.....+    ...          .+...
T Consensus       128 ~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~  204 (306)
T PLN02725        128 EWYAIAKIAGIKMCQAYRIQY---GWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLRE  204 (306)
T ss_pred             chHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeec
Confidence            249999999999988876553   7899999999888774211000    11122111    111          11235


Q ss_pred             CCChHhHHHHHHHHhCCCCCCccCcEEeecCCccccc
Q 024230          230 LGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       230 ~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                      +...+|+++++..++...   ..+..+++.+|..++.
T Consensus       205 ~i~v~Dv~~~~~~~~~~~---~~~~~~ni~~~~~~s~  238 (306)
T PLN02725        205 FLHVDDLADAVVFLMRRY---SGAEHVNVGSGDEVTI  238 (306)
T ss_pred             cccHHHHHHHHHHHHhcc---ccCcceEeCCCCcccH
Confidence            677999999999988642   2345678888776554

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.63  E-value=5.2e-14  Score=127.84  Aligned_cols=217  Identities=16%  Similarity=0.102  Sum_probs=143.2

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      +.++|+||||+|.||++++++|+++|++|++++|...........+.. ..++.++..|+.+..     +        .+
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~-~~~~~~~~~Di~~~~-----~--------~~  184 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFG-NPRFELIRHDVVEPI-----L--------LE  184 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhcc-CCceEEEECcccccc-----c--------cC
Confidence            457899999999999999999999999999998853321111111111 135667778886531     1        36


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC--------------
Q 024230           99 LNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA--------------  164 (270)
Q Consensus        99 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~--------------  164 (270)
                      +|++||+|+....... ..+   -.+.+++|+.++.++++++.    +.+ .++|++||...+...              
T Consensus       185 ~D~ViHlAa~~~~~~~-~~~---p~~~~~~Nv~gT~nLleaa~----~~g-~r~V~~SS~~VYg~~~~~p~~E~~~~~~~  255 (436)
T PLN02166        185 VDQIYHLACPASPVHY-KYN---PVKTIKTNVMGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLEHPQKETYWGNVN  255 (436)
T ss_pred             CCEEEECceeccchhh-ccC---HHHHHHHHHHHHHHHHHHHH----HhC-CEEEEECcHHHhCCCCCCCCCccccccCC
Confidence            8999999987533221 112   35778999999999998884    333 389999988654321              


Q ss_pred             C--CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC--ChhhHHHHhhcCC---------CCCCC
Q 024230          165 N--VGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG--NGKFVDEVKSRTP---------MGRLG  231 (270)
Q Consensus       165 ~--~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~---------~~~~~  231 (270)
                      |  ....|+.+|.+.+.+++.+.+.   .++++..+.|+.+..+.......  ...+........+         .+.+.
T Consensus       256 p~~p~s~Yg~SK~~aE~~~~~y~~~---~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi  332 (436)
T PLN02166        256 PIGERSCYDEGKRTAETLAMDYHRG---AGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQ  332 (436)
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHH---hCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeE
Confidence            1  1346999999999999887654   47888888888777764221100  0122222222211         12355


Q ss_pred             ChHhHHHHHHHHhCCCCCCccCcEEeecCCcccc
Q 024230          232 EPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       232 ~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                      ..+|+++++..++...    .+.++++.+|..+.
T Consensus       333 ~V~Dva~ai~~~~~~~----~~giyNIgs~~~~S  362 (436)
T PLN02166        333 YVSDLVDGLVALMEGE----HVGPFNLGNPGEFT  362 (436)
T ss_pred             EHHHHHHHHHHHHhcC----CCceEEeCCCCcEe
Confidence            6899999998887432    23489998776554

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.62  E-value=3.4e-14  Score=123.19  Aligned_cols=146  Identities=17%  Similarity=0.156  Sum_probs=106.8

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      ++||||||+|.||++++++|+++| +|+.++|...                 .+..|++|.+.+.++++.      .++|
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-----------------~~~~Dl~d~~~~~~~~~~------~~~D   56 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST-----------------DYCGDFSNPEGVAETVRK------IRPD   56 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-----------------cccCCCCCHHHHHHHHHh------cCCC
Confidence            379999999999999999999999 7888887531                 234799999988887764      3689


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC-----------CCChh
Q 024230          101 IFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA-----------NVGTV  169 (270)
Q Consensus       101 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~-----------~~~~~  169 (270)
                      ++||+|+......    ..++-+..+.+|+.++.++++++.    +.+ .++|++||..-+.+.           .....
T Consensus        57 ~Vih~Aa~~~~~~----~~~~~~~~~~~N~~~~~~l~~aa~----~~g-~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~  127 (299)
T PRK09987         57 VIVNAAAHTAVDK----AESEPEFAQLLNATSVEAIAKAAN----EVG-AWVVHYSTDYVFPGTGDIPWQETDATAPLNV  127 (299)
T ss_pred             EEEECCccCCcch----hhcCHHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEccceEECCCCCCCcCCCCCCCCCCH
Confidence            9999999754321    112234567899999999998884    333 479999886543211           12246


Q ss_pred             hhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCC
Q 024230          170 YSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTP  206 (270)
Q Consensus       170 y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~  206 (270)
                      |+.+|.+.+.+++.+..       ....+.|+++..+
T Consensus       128 Yg~sK~~~E~~~~~~~~-------~~~ilR~~~vyGp  157 (299)
T PRK09987        128 YGETKLAGEKALQEHCA-------KHLIFRTSWVYAG  157 (299)
T ss_pred             HHHHHHHHHHHHHHhCC-------CEEEEecceecCC
Confidence            99999999999876532       2366677777655

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.59  E-value=8.2e-14  Score=133.23  Aligned_cols=221  Identities=19%  Similarity=0.124  Sum_probs=144.7

Q ss_pred             CEEEEecCCCcHHHHHHHHHH--HCCCeEEEeeCChhHHHHHHHHHHhcC-CeEEEEEccCCCHHHH--HHHHHHHHHHc
Q 024230           21 MTALVTGGTKGLGLAVVEELS--MLGATVHTCSRTETELNECIHHLQMKG-LKVTGSVCDVSSRPQR--QTLINTVSSLF   95 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~--~~G~~v~l~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~--~~~~~~i~~~~   95 (270)
                      ++||||||+|.||++++++|+  ++|++|++++|+... ..........+ .++.++..|++|++..  ...++.    +
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~----l   75 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAE----L   75 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHH----h
Confidence            379999999999999999999  589999999996543 22222222222 4688899999985320  111122    2


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC-----------
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA-----------  164 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~-----------  164 (270)
                       .++|++||||+.....    .+   ..+..++|+.++.++++++    .+.+..++|++||...+...           
T Consensus        76 -~~~D~Vih~Aa~~~~~----~~---~~~~~~~nv~gt~~ll~~a----~~~~~~~~v~~SS~~v~g~~~~~~~e~~~~~  143 (657)
T PRK07201         76 -GDIDHVVHLAAIYDLT----AD---EEAQRAANVDGTRNVVELA----ERLQAATFHHVSSIAVAGDYEGVFREDDFDE  143 (657)
T ss_pred             -cCCCEEEECceeecCC----CC---HHHHHHHHhHHHHHHHHHH----HhcCCCeEEEEeccccccCccCccccccchh
Confidence             4789999999975322    12   2456789999999998877    44445789999988654221           


Q ss_pred             --CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC---Ch----hhHHHHhhc---CC------
Q 024230          165 --NVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG---NG----KFVDEVKSR---TP------  226 (270)
Q Consensus       165 --~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~---~~----~~~~~~~~~---~~------  226 (270)
                        .....|+.+|...+.+.+.      ..++++..+.|+.+..+-......   ..    .....+...   .+      
T Consensus       144 ~~~~~~~Y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (657)
T PRK07201        144 GQGLPTPYHRTKFEAEKLVRE------ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDG  217 (657)
T ss_pred             hcCCCCchHHHHHHHHHHHHH------cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCC
Confidence              1224699999999998863      247999999999887653211110   00    011111100   01      


Q ss_pred             -CCCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCccccc
Q 024230          227 -MGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       227 -~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                       .......+|+++++..++..  ....|+++++-++..+..
T Consensus       218 ~~~~~v~vddva~ai~~~~~~--~~~~g~~~ni~~~~~~s~  256 (657)
T PRK07201        218 GRTNIVPVDYVADALDHLMHK--DGRDGQTFHLTDPKPQRV  256 (657)
T ss_pred             CeeeeeeHHHHHHHHHHHhcC--cCCCCCEEEeCCCCCCcH
Confidence             01234589999999888853  335789999988766543

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.58  E-value=2.1e-13  Score=109.52  Aligned_cols=173  Identities=14%  Similarity=0.081  Sum_probs=126.1

Q ss_pred             EEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcccEE
Q 024230           23 ALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIF  102 (270)
Q Consensus        23 vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~l  102 (270)
                      |+|+||+|.+|+.++++|+++|++|+++.|++++.++        ..++.++.+|+.|++++.+++        ...|.+
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--------~~~~~~~~~d~~d~~~~~~al--------~~~d~v   64 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--------SPGVEIIQGDLFDPDSVKAAL--------KGADAV   64 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--------CTTEEEEESCTTCHHHHHHHH--------TTSSEE
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--------ccccccceeeehhhhhhhhhh--------hhcchh
Confidence            7999999999999999999999999999999997765        457999999999998888877        578999


Q ss_pred             EECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCC---------hhhhhh
Q 024230          103 VNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG---------TVYSAT  173 (270)
Q Consensus       103 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~---------~~y~~s  173 (270)
                      |++++....         +            ...++.++..+++.+..++|++|+...+...+..         ..|...
T Consensus        65 i~~~~~~~~---------~------------~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (183)
T PF13460_consen   65 IHAAGPPPK---------D------------VDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARD  123 (183)
T ss_dssp             EECCHSTTT---------H------------HHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHH
T ss_pred             hhhhhhhcc---------c------------ccccccccccccccccccceeeeccccCCCCCcccccccccchhhhHHH
Confidence            999975432         0            4445555666677777799999998877654442         245555


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhC
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCM  245 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (270)
                      |...+.+.       ...+++...+.|+++..+......-...      .........+.+|+|++++.++.
T Consensus       124 ~~~~e~~~-------~~~~~~~~ivrp~~~~~~~~~~~~~~~~------~~~~~~~~i~~~DvA~~~~~~l~  182 (183)
T PF13460_consen  124 KREAEEAL-------RESGLNWTIVRPGWIYGNPSRSYRLIKE------GGPQGVNFISREDVAKAIVEALE  182 (183)
T ss_dssp             HHHHHHHH-------HHSTSEEEEEEESEEEBTTSSSEEEESS------TSTTSHCEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHH-------HhcCCCEEEEECcEeEeCCCcceeEEec------cCCCCcCcCCHHHHHHHHHHHhC
Confidence            55554443       2358999999999988775332110000      11111235578999999988763

...

>PLN02996 fatty acyl-CoA reductase

Probab=99.57  E-value=2.6e-13  Score=125.01  Aligned_cols=222  Identities=18%  Similarity=0.176  Sum_probs=145.9

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCC---eEEEeeCChhH---HHHHHHHH---------Hh-c--------CCeEE
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGA---TVHTCSRTETE---LNECIHHL---------QM-K--------GLKVT   72 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~---~v~l~~r~~~~---~~~~~~~~---------~~-~--------~~~~~   72 (270)
                      -++||+|+||||+|.+|+.+++.|++.+.   +|+++.|....   .+++..++         .+ .        ..++.
T Consensus         8 ~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~   87 (491)
T PLN02996          8 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVT   87 (491)
T ss_pred             HhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEE
Confidence            47899999999999999999999998753   57888886531   11211111         00 0        14789


Q ss_pred             EEEccCCCH-------HHHHHHHHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 024230           73 GSVCDVSSR-------PQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLR  145 (270)
Q Consensus        73 ~~~~D~~~~-------~~~~~~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~  145 (270)
                      ++..|++++       +.++.++        ..+|++||+|+.....       ++.+..+.+|+.++.++++++...  
T Consensus        88 ~i~GDl~~~~LGLs~~~~~~~l~--------~~vD~ViH~AA~v~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~--  150 (491)
T PLN02996         88 PVPGDISYDDLGVKDSNLREEMW--------KEIDIVVNLAATTNFD-------ERYDVALGINTLGALNVLNFAKKC--  150 (491)
T ss_pred             EEecccCCcCCCCChHHHHHHHH--------hCCCEEEECccccCCc-------CCHHHHHHHHHHHHHHHHHHHHhc--
Confidence            999999843       3334443        4689999999975421       235678899999999999887421  


Q ss_pred             hcCCcEEEEecCccccccCC------------------------------------------------------------
Q 024230          146 ASGAASIVLMSSALGIVSAN------------------------------------------------------------  165 (270)
Q Consensus       146 ~~~~g~ii~iss~~~~~~~~------------------------------------------------------------  165 (270)
                       .+..++|++||...+....                                                            
T Consensus       151 -~~~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (491)
T PLN02996        151 -VKVKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKL  229 (491)
T ss_pred             -CCCCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHh
Confidence             2345799998876542210                                                            


Q ss_pred             --CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccc---cCChhhHHHH----hhcC---------CC
Q 024230          166 --VGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPL---LGNGKFVDEV----KSRT---------PM  227 (270)
Q Consensus       166 --~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~---~~~~~~~~~~----~~~~---------~~  227 (270)
                        ....|+.||++.+.+++..+     .++.+..+.|+.|..+...+.   ...-.....+    ....         ..
T Consensus       230 ~~~pn~Y~~TK~~aE~lv~~~~-----~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~  304 (491)
T PLN02996        230 HGWPNTYVFTKAMGEMLLGNFK-----ENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSV  304 (491)
T ss_pred             CCCCCchHhhHHHHHHHHHHhc-----CCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCee
Confidence              01249999999999997653     379999999998887654432   1111111111    1111         12


Q ss_pred             CCCCChHhHHHHHHHHhCCCC-CCccCcEEeecCC
Q 024230          228 GRLGEPKEVSSLVAFLCMPAA-SYITGQTVCIDGG  261 (270)
Q Consensus       228 ~~~~~~~dva~~~~~l~s~~~-~~~~G~~i~vdgG  261 (270)
                      .....++|++++++.++.... ..-.++++++.+|
T Consensus       305 ~D~v~Vddvv~a~l~a~~~~~~~~~~~~vYNi~s~  339 (491)
T PLN02996        305 LDVIPADMVVNAMIVAMAAHAGGQGSEIIYHVGSS  339 (491)
T ss_pred             cceecccHHHHHHHHHHHHhhccCCCCcEEEecCC
Confidence            345578999999887775321 1124788999988

>PRK05865 hypothetical protein; Provisional

Probab=99.56  E-value=1.1e-13  Score=133.17  Aligned_cols=182  Identities=14%  Similarity=0.119  Sum_probs=130.6

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      ++|+||||+|+||++++++|+++|++|++++|+....      .   ...+.++.+|++|.+++.+++        ..+|
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~---~~~v~~v~gDL~D~~~l~~al--------~~vD   63 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W---PSSADFIAADIRDATAVESAM--------TGAD   63 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c---ccCceEEEeeCCCHHHHHHHH--------hCCC
Confidence            3799999999999999999999999999999975421      1   124678899999999888777        3589


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHHHHH
Q 024230          101 IFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQL  180 (270)
Q Consensus       101 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal~~~  180 (270)
                      ++||+|+....             .+++|+.++.++++++    .+.+.+++|++||..              |.+.+.+
T Consensus        64 ~VVHlAa~~~~-------------~~~vNv~GT~nLLeAa----~~~gvkr~V~iSS~~--------------K~aaE~l  112 (854)
T PRK05865         64 VVAHCAWVRGR-------------NDHINIDGTANVLKAM----AETGTGRIVFTSSGH--------------QPRVEQM  112 (854)
T ss_pred             EEEECCCcccc-------------hHHHHHHHHHHHHHHH----HHcCCCeEEEECCcH--------------HHHHHHH
Confidence            99999986321             3578999998886665    555667899999853              7777776


Q ss_pred             HHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcC--CC------CCCCChHhHHHHHHHHhCCCCCCcc
Q 024230          181 AKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRT--PM------GRLGEPKEVSSLVAFLCMPAASYIT  252 (270)
Q Consensus       181 ~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~--~~------~~~~~~~dva~~~~~l~s~~~~~~~  252 (270)
                      .+.       .++.+..+.|+.+..+...      .+...+....  ..      ..+...+|+++++..++...  ...
T Consensus       113 l~~-------~gl~~vILRp~~VYGP~~~------~~i~~ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~--~~~  177 (854)
T PRK05865        113 LAD-------CGLEWVAVRCALIFGRNVD------NWVQRLFALPVLPAGYADRVVQVVHSDDAQRLLVRALLDT--VID  177 (854)
T ss_pred             HHH-------cCCCEEEEEeceEeCCChH------HHHHHHhcCceeccCCCCceEeeeeHHHHHHHHHHHHhCC--CcC
Confidence            632       4799999999988876311      1121111100  11      12567899999998887432  124


Q ss_pred             CcEEeecCCcccc
Q 024230          253 GQTVCIDGGFTVN  265 (270)
Q Consensus       253 G~~i~vdgG~~~~  265 (270)
                      |..+++.+|..++
T Consensus       178 ggvyNIgsg~~~S  190 (854)
T PRK05865        178 SGPVNLAAPGELT  190 (854)
T ss_pred             CCeEEEECCCccc
Confidence            6678888876544

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.56  E-value=6e-13  Score=113.18  Aligned_cols=184  Identities=14%  Similarity=0.089  Sum_probs=153.2

Q ss_pred             CCEEEEecC-CCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC-
Q 024230           20 GMTALVTGG-TKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG-   97 (270)
Q Consensus        20 gk~vlItG~-s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~-   97 (270)
                      ..+|+|.|. ..-+++.+|..|-++|+-|+++..+.++.+.+..+-   ...+.....|..++.++...+.++...+.. 
T Consensus         3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~---~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~p   79 (299)
T PF08643_consen    3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESED---RPDIRPLWLDDSDPSSIHASLSRFASLLSRP   79 (299)
T ss_pred             eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhcc---CCCCCCcccCCCCCcchHHHHHHHHHHhcCC
Confidence            358899995 899999999999999999999999888765544433   245788888998888888888888777642 


Q ss_pred             ------------cccEEEECCCC-CCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh---cCCcEEEEecCcccc
Q 024230           98 ------------KLNIFVNNVGT-SVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRA---SGAASIVLMSSALGI  161 (270)
Q Consensus        98 ------------~id~li~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~---~~~g~ii~iss~~~~  161 (270)
                                  .+..+|..... .+.+|++.++.++|.+.++.|+..++.+++.++|+++.   ++...|++.-|+.+.
T Consensus        80 ~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~ss  159 (299)
T PF08643_consen   80 HVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSISSS  159 (299)
T ss_pred             CCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchhhc
Confidence                        36677776655 35788999999999999999999999999999999988   443344455577778


Q ss_pred             ccCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCC
Q 024230          162 VSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTP  206 (270)
Q Consensus       162 ~~~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~  206 (270)
                      ...|+.+.-.....++.+|.++|.+|+.+.+|.|..+..|.++-.
T Consensus       160 l~~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~  204 (299)
T PF08643_consen  160 LNPPFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIG  204 (299)
T ss_pred             cCCCccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeeccc
Confidence            888999999999999999999999999999999999999877765

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.50  E-value=4.8e-13  Score=113.09  Aligned_cols=156  Identities=19%  Similarity=0.202  Sum_probs=121.3

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhH----HHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETE----LNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .+++||||||+|-||.+++.+|.++|+.|+++|.-.+.    +.+.. ++...+..+.++..|++|.+.+++++++    
T Consensus         1 ~~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~-~l~~~~~~v~f~~~Dl~D~~~L~kvF~~----   75 (343)
T KOG1371|consen    1 GGKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVR-QLLGEGKSVFFVEGDLNDAEALEKLFSE----   75 (343)
T ss_pred             CCcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHH-HhcCCCCceEEEEeccCCHHHHHHHHhh----
Confidence            36899999999999999999999999999999764433    33222 2222357899999999999999999987    


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC----------
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA----------  164 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~----------  164 (270)
                        -++|.++|-|+....+.    +.++....+..|+.++++++...    ++.+-..+|+.||..-+...          
T Consensus        76 --~~fd~V~Hfa~~~~vge----S~~~p~~Y~~nNi~gtlnlLe~~----~~~~~~~~V~sssatvYG~p~~ip~te~~~  145 (343)
T KOG1371|consen   76 --VKFDAVMHFAALAAVGE----SMENPLSYYHNNIAGTLNLLEVM----KAHNVKALVFSSSATVYGLPTKVPITEEDP  145 (343)
T ss_pred             --cCCceEEeehhhhccch----hhhCchhheehhhhhHHHHHHHH----HHcCCceEEEecceeeecCcceeeccCcCC
Confidence              47999999999876553    45555788999999999996655    66665678887776544221          


Q ss_pred             -C-CChhhhhhHHHHHHHHHHHHHHHc
Q 024230          165 -N-VGTVYSATKGAMNQLAKNLACEWA  189 (270)
Q Consensus       165 -~-~~~~y~~sKaal~~~~~sla~el~  189 (270)
                       . ....|+.+|.+++...+.+..-+.
T Consensus       146 t~~p~~pyg~tK~~iE~i~~d~~~~~~  172 (343)
T KOG1371|consen  146 TDQPTNPYGKTKKAIEEIIHDYNKAYG  172 (343)
T ss_pred             CCCCCCcchhhhHHHHHHHHhhhcccc
Confidence             1 345799999999999999887654

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.50  E-value=1.3e-12  Score=113.85  Aligned_cols=230  Identities=20%  Similarity=0.201  Sum_probs=152.3

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCC--CeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLG--ATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G--~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      .++.+++||||+|.+|++++.+|.++|  .+|.+++..+....-..+........+.++.+|+.+..++...+       
T Consensus         2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~-------   74 (361)
T KOG1430|consen    2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAF-------   74 (361)
T ss_pred             CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhc-------
Confidence            367899999999999999999999999  68999988765211111111113568999999999988877777       


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccccc------------
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVS------------  163 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~------------  163 (270)
                       ... .++|||+.....-    -..+-+..+++|+.|+.+++.++    .+.+..++|++||..-..+            
T Consensus        75 -~~~-~Vvh~aa~~~~~~----~~~~~~~~~~vNV~gT~nvi~~c----~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p  144 (361)
T KOG1430|consen   75 -QGA-VVVHCAASPVPDF----VENDRDLAMRVNVNGTLNVIEAC----KELGVKRLIYTSSAYVVFGGEPIINGDESLP  144 (361)
T ss_pred             -cCc-eEEEeccccCccc----cccchhhheeecchhHHHHHHHH----HHhCCCEEEEecCceEEeCCeecccCCCCCC
Confidence             455 7777776643322    22234567899999999887777    6677789999999864332            


Q ss_pred             CC--CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcC---------CCCCCCC
Q 024230          164 AN--VGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRT---------PMGRLGE  232 (270)
Q Consensus       164 ~~--~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~  232 (270)
                      .|  ....|+.||+--|.+++..+.   .......++.|-.|..|-.+...+.  ..+-+....         .+..+..
T Consensus       145 ~p~~~~d~Y~~sKa~aE~~Vl~an~---~~~l~T~aLR~~~IYGpgd~~~~~~--i~~~~~~g~~~f~~g~~~~~~~~~~  219 (361)
T KOG1430|consen  145 YPLKHIDPYGESKALAEKLVLEANG---SDDLYTCALRPPGIYGPGDKRLLPK--IVEALKNGGFLFKIGDGENLNDFTY  219 (361)
T ss_pred             CccccccccchHHHHHHHHHHHhcC---CCCeeEEEEccccccCCCCccccHH--HHHHHHccCceEEeeccccccceEE
Confidence            12  224899999999999988764   3468899999988887755443221  111111100         0001111


Q ss_pred             hHhHHH---HHHHHhCCCCCCccCcEEeecCCcccccccc
Q 024230          233 PKEVSS---LVAFLCMPAASYITGQTVCIDGGFTVNGFFF  269 (270)
Q Consensus       233 ~~dva~---~~~~l~s~~~~~~~G~~i~vdgG~~~~~~~~  269 (270)
                      .+-++.   .....+.+.+..++||.+.+..|..++-.+|
T Consensus       220 ~~Nva~ahilA~~aL~~~~~~~~Gq~yfI~d~~p~~~~~~  259 (361)
T KOG1430|consen  220 GENVAWAHILAARALLDKSPSVNGQFYFITDDTPVRFFDF  259 (361)
T ss_pred             echhHHHHHHHHHHHHhcCCccCceEEEEeCCCcchhhHH
Confidence            221222   1122222367889999999999988876554

>PLN02778 3,5-epimerase/4-reductase

Probab=99.47  E-value=5.8e-12  Score=109.19  Aligned_cols=195  Identities=15%  Similarity=0.145  Sum_probs=119.7

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      |+||||||+|.||.+++++|+++|++|+...                        .|+.+.+.+...++.      .++|
T Consensus        10 ~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~------------------------~~~~~~~~v~~~l~~------~~~D   59 (298)
T PLN02778         10 LKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS------------------------GRLENRASLEADIDA------VKPT   59 (298)
T ss_pred             CeEEEECCCCHHHHHHHHHHHhCCCEEEEec------------------------CccCCHHHHHHHHHh------cCCC
Confidence            6899999999999999999999999987432                        234455444444432      3689


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccc-------------c---C
Q 024230          101 IFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIV-------------S---A  164 (270)
Q Consensus       101 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~-------------~---~  164 (270)
                      ++||+|+....... +...++-.+.+++|+.++.++++++.    +.+. +++++||...+.             .   .
T Consensus        60 ~ViH~Aa~~~~~~~-~~~~~~p~~~~~~Nv~gt~~ll~aa~----~~gv-~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~  133 (298)
T PLN02778         60 HVFNAAGVTGRPNV-DWCESHKVETIRANVVGTLTLADVCR----ERGL-VLTNYATGCIFEYDDAHPLGSGIGFKEEDT  133 (298)
T ss_pred             EEEECCcccCCCCc-hhhhhCHHHHHHHHHHHHHHHHHHHH----HhCC-CEEEEecceEeCCCCCCCcccCCCCCcCCC
Confidence            99999998643211 11223446789999999999999984    3333 345555432210             0   0


Q ss_pred             C--CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCC---C-CCCCChHhHHH
Q 024230          165 N--VGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTP---M-GRLGEPKEVSS  238 (270)
Q Consensus       165 ~--~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~dva~  238 (270)
                      +  ....|+.||.+.+.+++.++..   .++|+     ++....   .......+...+....+   . ......+|+++
T Consensus       134 p~~~~s~Yg~sK~~~E~~~~~y~~~---~~lr~-----~~~~~~---~~~~~~~fi~~~~~~~~~~~~~~s~~yv~D~v~  202 (298)
T PLN02778        134 PNFTGSFYSKTKAMVEELLKNYENV---CTLRV-----RMPISS---DLSNPRNFITKITRYEKVVNIPNSMTILDELLP  202 (298)
T ss_pred             CCCCCCchHHHHHHHHHHHHHhhcc---EEeee-----cccCCc---ccccHHHHHHHHHcCCCeeEcCCCCEEHHHHHH
Confidence            1  1257999999999999886532   23444     211110   00001122333322221   1 23567899999


Q ss_pred             HHHHHhCCCCCCccCcEEeecCCccccc
Q 024230          239 LVAFLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       239 ~~~~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                      +++.++...   .. ..+++.+|..++.
T Consensus       203 al~~~l~~~---~~-g~yNigs~~~iS~  226 (298)
T PLN02778        203 ISIEMAKRN---LT-GIYNFTNPGVVSH  226 (298)
T ss_pred             HHHHHHhCC---CC-CeEEeCCCCcccH
Confidence            998888432   23 4899987766543

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.44  E-value=1.8e-11  Score=103.32  Aligned_cols=198  Identities=15%  Similarity=0.165  Sum_probs=136.1

Q ss_pred             EEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcccEE
Q 024230           23 ALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIF  102 (270)
Q Consensus        23 vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~l  102 (270)
                      +||||++|-+|.+|++.|. .+++|+.++|.+                     +|++|.+.+.+++.+      .++|++
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~---------------------~Ditd~~~v~~~i~~------~~PDvV   54 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE---------------------LDITDPDAVLEVIRE------TRPDVV   54 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc---------------------ccccChHHHHHHHHh------hCCCEE
Confidence            9999999999999999999 778999988764                     799999999999977      489999


Q ss_pred             EECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCC-----------CChhhh
Q 024230          103 VNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSAN-----------VGTVYS  171 (270)
Q Consensus       103 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~-----------~~~~y~  171 (270)
                      ||+|++......+.    +-+..+.+|..++.++.+++    .+- +-.+|++|+..-.-+..           ....||
T Consensus        55 In~AAyt~vD~aE~----~~e~A~~vNa~~~~~lA~aa----~~~-ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG  125 (281)
T COG1091          55 INAAAYTAVDKAES----EPELAFAVNATGAENLARAA----AEV-GARLVHISTDYVFDGEKGGPYKETDTPNPLNVYG  125 (281)
T ss_pred             EECccccccccccC----CHHHHHHhHHHHHHHHHHHH----HHh-CCeEEEeecceEecCCCCCCCCCCCCCCChhhhh
Confidence            99999976543222    24567899999999999998    333 35799999775432222           235799


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhc-------CCCCCCCChHhHHHHHHHHh
Q 024230          172 ATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSR-------TPMGRLGEPKEVSSLVAFLC  244 (270)
Q Consensus       172 ~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~dva~~~~~l~  244 (270)
                      .||.+-|..+++..       -+...+..+|+.....+.+.  ...++.....       ...+.....+|+|+++..++
T Consensus       126 ~sKl~GE~~v~~~~-------~~~~I~Rtswv~g~~g~nFv--~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll  196 (281)
T COG1091         126 RSKLAGEEAVRAAG-------PRHLILRTSWVYGEYGNNFV--KTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELL  196 (281)
T ss_pred             HHHHHHHHHHHHhC-------CCEEEEEeeeeecCCCCCHH--HHHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHH
Confidence            99999999998763       22233444445443222211  0111111111       12345667899999999988


Q ss_pred             CCCCCCccCcEEeecCCcccccccc
Q 024230          245 MPAASYITGQTVCIDGGFTVNGFFF  269 (270)
Q Consensus       245 s~~~~~~~G~~i~vdgG~~~~~~~~  269 (270)
                      ....   .+-++.+-|-...+|.+|
T Consensus       197 ~~~~---~~~~yH~~~~g~~Swydf  218 (281)
T COG1091         197 EKEK---EGGVYHLVNSGECSWYEF  218 (281)
T ss_pred             hccc---cCcEEEEeCCCcccHHHH
Confidence            6542   333666666555666554

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.44  E-value=1.3e-12  Score=112.64  Aligned_cols=204  Identities=15%  Similarity=0.150  Sum_probs=128.6

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      ++|||||++|-+|.++.+.|.++|++|+.++|.                     .+|++|.+++.+++.+.      ++|
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~---------------------~~dl~d~~~~~~~~~~~------~pd   53 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRS---------------------DLDLTDPEAVAKLLEAF------KPD   53 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT---------------------CS-TTSHHHHHHHHHHH--------S
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch---------------------hcCCCCHHHHHHHHHHh------CCC
Confidence            379999999999999999999999999999876                     57999999988888763      689


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC-----------CCChh
Q 024230          101 IFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA-----------NVGTV  169 (270)
Q Consensus       101 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~-----------~~~~~  169 (270)
                      ++||||+.....    .-.++-+..+.+|+.++..+.+.+    .+. +-++|++||..-+.+.           .....
T Consensus        54 ~Vin~aa~~~~~----~ce~~p~~a~~iN~~~~~~la~~~----~~~-~~~li~~STd~VFdG~~~~~y~E~d~~~P~~~  124 (286)
T PF04321_consen   54 VVINCAAYTNVD----ACEKNPEEAYAINVDATKNLAEAC----KER-GARLIHISTDYVFDGDKGGPYTEDDPPNPLNV  124 (286)
T ss_dssp             EEEE------HH----HHHHSHHHHHHHHTHHHHHHHHHH----HHC-T-EEEEEEEGGGS-SSTSSSB-TTS----SSH
T ss_pred             eEeccceeecHH----hhhhChhhhHHHhhHHHHHHHHHH----HHc-CCcEEEeeccEEEcCCcccccccCCCCCCCCH
Confidence            999999985321    122345678999999999998888    333 3689999998544332           12357


Q ss_pred             hhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcC-------CCCCCCChHhHHHHHHH
Q 024230          170 YSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRT-------PMGRLGEPKEVSSLVAF  242 (270)
Q Consensus       170 y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~dva~~~~~  242 (270)
                      ||.+|...|...+...       -+...+.++++..+-...+  .......+....       ........+|+|+.+..
T Consensus       125 YG~~K~~~E~~v~~~~-------~~~~IlR~~~~~g~~~~~~--~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~  195 (286)
T PF04321_consen  125 YGRSKLEGEQAVRAAC-------PNALILRTSWVYGPSGRNF--LRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILE  195 (286)
T ss_dssp             HHHHHHHHHHHHHHH--------SSEEEEEE-SEESSSSSSH--HHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhc-------CCEEEEecceecccCCCch--hhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHH
Confidence            9999999999887731       1566677777766511111  011222222111       12234468999999999


Q ss_pred             HhCCC-CCCccCcEEeecCCcccccccc
Q 024230          243 LCMPA-ASYITGQTVCIDGGFTVNGFFF  269 (270)
Q Consensus       243 l~s~~-~~~~~G~~i~vdgG~~~~~~~~  269 (270)
                      ++... .......++++.|...+++.+|
T Consensus       196 l~~~~~~~~~~~Giyh~~~~~~~S~~e~  223 (286)
T PF04321_consen  196 LIEKNLSGASPWGIYHLSGPERVSRYEF  223 (286)
T ss_dssp             HHHHHHH-GGG-EEEE---BS-EEHHHH
T ss_pred             HHHhcccccccceeEEEecCcccCHHHH
Confidence            99643 1122367888888877765544

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.42  E-value=4.5e-11  Score=123.26  Aligned_cols=228  Identities=14%  Similarity=0.158  Sum_probs=146.2

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCC----CeEEEeeCChhHH---HHHHHHHHhc-------CCeEEEEEccCCCHHHH
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLG----ATVHTCSRTETEL---NECIHHLQMK-------GLKVTGSVCDVSSRPQR   84 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G----~~v~l~~r~~~~~---~~~~~~~~~~-------~~~~~~~~~D~~~~~~~   84 (270)
                      ..++|+|||++|.+|.+++++|+++|    ++|+.+.|+....   +++...+...       ..++.++..|++++.--
T Consensus       970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443       970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred             CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence            35899999999999999999999988    7899999975432   2222222221       13688899999854210


Q ss_pred             --HHHHHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccc
Q 024230           85 --QTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIV  162 (270)
Q Consensus        85 --~~~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~  162 (270)
                        ....+++   . ..+|.+||||+....    ..+   +......|+.++.++++.+.    +.+..+++++||.+.+.
T Consensus      1050 l~~~~~~~l---~-~~~d~iiH~Aa~~~~----~~~---~~~~~~~nv~gt~~ll~~a~----~~~~~~~v~vSS~~v~~ 1114 (1389)
T TIGR03443      1050 LSDEKWSDL---T-NEVDVIIHNGALVHW----VYP---YSKLRDANVIGTINVLNLCA----EGKAKQFSFVSSTSALD 1114 (1389)
T ss_pred             cCHHHHHHH---H-hcCCEEEECCcEecC----ccC---HHHHHHhHHHHHHHHHHHHH----hCCCceEEEEeCeeecC
Confidence              1112222   1 468999999997532    122   33445679999999988773    34445899999975542


Q ss_pred             c-----------------C-----------CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC
Q 024230          163 S-----------------A-----------NVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN  214 (270)
Q Consensus       163 ~-----------------~-----------~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~  214 (270)
                      .                 .           .....|+.||.+.+.+++.++.    .|+++..+.||.+..+........
T Consensus      1115 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~----~g~~~~i~Rpg~v~G~~~~g~~~~ 1190 (1389)
T TIGR03443      1115 TEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK----RGLRGCIVRPGYVTGDSKTGATNT 1190 (1389)
T ss_pred             cccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh----CCCCEEEECCCccccCCCcCCCCc
Confidence            1                 0           0123599999999999887543    489999999999977643332211


Q ss_pred             hhhHHHHhh------cCC----CCCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCcccc
Q 024230          215 GKFVDEVKS------RTP----MGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       215 ~~~~~~~~~------~~~----~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                      ..+...+..      ..|    ...+...++++++++.++........+.++++.++..+.
T Consensus      1191 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~ 1251 (1389)
T TIGR03443      1191 DDFLLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIR 1251 (1389)
T ss_pred             hhHHHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCc
Confidence            222221111      011    123556899999999988543222345677787775543

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.42  E-value=4.2e-12  Score=107.27  Aligned_cols=160  Identities=18%  Similarity=0.176  Sum_probs=99.9

Q ss_pred             EecCCCcHHHHHHHHHHHCCC--eEEEeeCChhH---HHHHHHHHHh----------cCCeEEEEEccCCCHH------H
Q 024230           25 VTGGTKGLGLAVVEELSMLGA--TVHTCSRTETE---LNECIHHLQM----------KGLKVTGSVCDVSSRP------Q   83 (270)
Q Consensus        25 ItG~s~giG~~la~~l~~~G~--~v~l~~r~~~~---~~~~~~~~~~----------~~~~~~~~~~D~~~~~------~   83 (270)
                      |||++|.+|..+.++|++++.  +|+++.|..+.   .+++.+.+.+          ...++.++..|++++.      +
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999987  89999997643   2333222221          2568999999999854      3


Q ss_pred             HHHHHHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccc--
Q 024230           84 RQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGI--  161 (270)
Q Consensus        84 ~~~~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~--  161 (270)
                      ++.+.        .++|++||||+......       .+++..++|+.|+.++++.+.    +.+..+++++||....  
T Consensus        81 ~~~L~--------~~v~~IiH~Aa~v~~~~-------~~~~~~~~NV~gt~~ll~la~----~~~~~~~~~iSTa~v~~~  141 (249)
T PF07993_consen   81 YQELA--------EEVDVIIHCAASVNFNA-------PYSELRAVNVDGTRNLLRLAA----QGKRKRFHYISTAYVAGS  141 (249)
T ss_dssp             HHHHH--------HH--EEEE--SS-SBS--------S--EEHHHHHHHHHHHHHHHT----SSS---EEEEEEGGGTTS
T ss_pred             hhccc--------cccceeeecchhhhhcc-------cchhhhhhHHHHHHHHHHHHH----hccCcceEEeccccccCC
Confidence            33333        36899999999764321       234467899999999988883    3333489999993211  


Q ss_pred             cc------------------CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCC
Q 024230          162 VS------------------ANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTP  206 (270)
Q Consensus       162 ~~------------------~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~  206 (270)
                      ..                  ......|..||...|.+.+..+.+   .|+.+..+.||.+...
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~---~g~p~~I~Rp~~i~g~  201 (249)
T PF07993_consen  142 RPGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQR---HGLPVTIYRPGIIVGD  201 (249)
T ss_dssp             -TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHH---H---EEEEEE-EEE-S
T ss_pred             CCCcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhc---CCceEEEEecCccccc
Confidence            11                  012247999999999999988765   4789999999988774

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.35  E-value=2.4e-11  Score=111.22  Aligned_cols=156  Identities=16%  Similarity=0.224  Sum_probs=115.6

Q ss_pred             EecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcccEEEE
Q 024230           25 VTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVN  104 (270)
Q Consensus        25 ItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~li~  104 (270)
                      |+||++|+|.++++.+...|++|+.+.+.+.+..                   ..              .. .+++.+++
T Consensus        43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~-------------------~~--------------~~-~~~~~~~~   88 (450)
T PRK08261         43 LVGGAGRLAEALAALLAGLGYDVVANNDGGLTWA-------------------AG--------------WG-DRFGALVF   88 (450)
T ss_pred             EEccCchhHHHHHHHHhhCCCeeeecCccccccc-------------------cC--------------cC-CcccEEEE
Confidence            7788899999999999999999998765444110                   00              00 24554443


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHHHHHHHHH
Q 024230          105 NVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNL  184 (270)
Q Consensus       105 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal~~~~~sl  184 (270)
                      -+-..       .+.+++        .+.+.+++..++.|.+  .|+||+++|..+..   ....|+++|+++.+++|++
T Consensus        89 d~~~~-------~~~~~l--------~~~~~~~~~~l~~l~~--~griv~i~s~~~~~---~~~~~~~akaal~gl~rsl  148 (450)
T PRK08261         89 DATGI-------TDPADL--------KALYEFFHPVLRSLAP--CGRVVVLGRPPEAA---ADPAAAAAQRALEGFTRSL  148 (450)
T ss_pred             ECCCC-------CCHHHH--------HHHHHHHHHHHHhccC--CCEEEEEccccccC---CchHHHHHHHHHHHHHHHH
Confidence            22111       122222        2344667777777753  57999999987653   3456999999999999999


Q ss_pred             HHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCcc
Q 024230          185 ACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFT  263 (270)
Q Consensus       185 a~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~  263 (270)
                      ++|+ +.+++++.|.|++                            ..+++++..+.|++++.+.+++|+.+.++++..
T Consensus       149 a~E~-~~gi~v~~i~~~~----------------------------~~~~~~~~~~~~l~s~~~a~~~g~~i~~~~~~~  198 (450)
T PRK08261        149 GKEL-RRGATAQLVYVAP----------------------------GAEAGLESTLRFFLSPRSAYVSGQVVRVGAADA  198 (450)
T ss_pred             HHHh-hcCCEEEEEecCC----------------------------CCHHHHHHHHHHhcCCccCCccCcEEEecCCcc
Confidence            9999 7899999998864                            257889999999999999999999999999875

>PLN00016 RNA-binding protein; Provisional

Probab=99.35  E-value=2.5e-11  Score=108.69  Aligned_cols=206  Identities=18%  Similarity=0.193  Sum_probs=129.6

Q ss_pred             cCCCCCCEEEEe----cCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHH-------HHHHhcCCeEEEEEccCCCHHH
Q 024230           15 RWSLQGMTALVT----GGTKGLGLAVVEELSMLGATVHTCSRTETELNECI-------HHLQMKGLKVTGSVCDVSSRPQ   83 (270)
Q Consensus        15 ~~~l~gk~vlIt----G~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~   83 (270)
                      ....+.|+||||    ||+|.||..++++|+++|++|++++|+........       .++..  ..+.++.+|+.|   
T Consensus        47 ~~~~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~--~~v~~v~~D~~d---  121 (378)
T PLN00016         47 AAAVEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSS--AGVKTVWGDPAD---  121 (378)
T ss_pred             hcccccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhh--cCceEEEecHHH---
Confidence            345666899999    99999999999999999999999999876432211       12222  236677888865   


Q ss_pred             HHHHHHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccccc
Q 024230           84 RQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVS  163 (270)
Q Consensus        84 ~~~~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~  163 (270)
                      +.+++.     . ..+|++||+++.         ..           .++..++++    +++.+..++|++||...+..
T Consensus       122 ~~~~~~-----~-~~~d~Vi~~~~~---------~~-----------~~~~~ll~a----a~~~gvkr~V~~SS~~vyg~  171 (378)
T PLN00016        122 VKSKVA-----G-AGFDVVYDNNGK---------DL-----------DEVEPVADW----AKSPGLKQFLFCSSAGVYKK  171 (378)
T ss_pred             HHhhhc-----c-CCccEEEeCCCC---------CH-----------HHHHHHHHH----HHHcCCCEEEEEccHhhcCC
Confidence            333331     1 468999998763         11           122334444    35566678999999876543


Q ss_pred             CCCC--------hhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCC---------
Q 024230          164 ANVG--------TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTP---------  226 (270)
Q Consensus       164 ~~~~--------~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~---------  226 (270)
                      ....        ..+ .+|...+.+.+       ..++.+..+.|+.+..+...... ...+...+....+         
T Consensus       172 ~~~~p~~E~~~~~p~-~sK~~~E~~l~-------~~~l~~~ilRp~~vyG~~~~~~~-~~~~~~~~~~~~~i~~~g~g~~  242 (378)
T PLN00016        172 SDEPPHVEGDAVKPK-AGHLEVEAYLQ-------KLGVNWTSFRPQYIYGPGNNKDC-EEWFFDRLVRGRPVPIPGSGIQ  242 (378)
T ss_pred             CCCCCCCCCCcCCCc-chHHHHHHHHH-------HcCCCeEEEeceeEECCCCCCch-HHHHHHHHHcCCceeecCCCCe
Confidence            2111        011 27888877653       24799999999998876432110 0112222222111         


Q ss_pred             CCCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCccccc
Q 024230          227 MGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       227 ~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                      ...+...+|+++++..++...  ...|+++++.++..++.
T Consensus       243 ~~~~i~v~Dva~ai~~~l~~~--~~~~~~yni~~~~~~s~  280 (378)
T PLN00016        243 LTQLGHVKDLASMFALVVGNP--KAAGQIFNIVSDRAVTF  280 (378)
T ss_pred             eeceecHHHHHHHHHHHhcCc--cccCCEEEecCCCccCH
Confidence            112456899999999888542  24679999988765543

>PRK12320 hypothetical protein; Provisional

Probab=99.34  E-value=1.3e-10  Score=110.01  Aligned_cols=188  Identities=15%  Similarity=0.120  Sum_probs=122.7

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcccE
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNI  101 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~  101 (270)
                      +||||||+|.||++++++|.++|++|++++|.+...         ....+.++.+|+++.. +.+++        .++|+
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~---------~~~~ve~v~~Dl~d~~-l~~al--------~~~D~   63 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA---------LDPRVDYVCASLRNPV-LQELA--------GEADA   63 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc---------ccCCceEEEccCCCHH-HHHHh--------cCCCE
Confidence            699999999999999999999999999999875431         1135778899999873 33333        46899


Q ss_pred             EEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHHHHHH
Q 024230          102 FVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLA  181 (270)
Q Consensus       102 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal~~~~  181 (270)
                      +||+|+.....            ...+|+.++.++++++    ++.+ .++|++||..+   .+  ..|.    ..+.+.
T Consensus        64 VIHLAa~~~~~------------~~~vNv~Gt~nLleAA----~~~G-vRiV~~SS~~G---~~--~~~~----~aE~ll  117 (699)
T PRK12320         64 VIHLAPVDTSA------------PGGVGITGLAHVANAA----ARAG-ARLLFVSQAAG---RP--ELYR----QAETLV  117 (699)
T ss_pred             EEEcCccCccc------------hhhHHHHHHHHHHHHH----HHcC-CeEEEEECCCC---CC--cccc----HHHHHH
Confidence            99999863211            1247999999998887    4444 37999887642   11  1232    223332


Q ss_pred             HHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCC---CCChHhHHHHHHHHhCCCCCCccCcEEee
Q 024230          182 KNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGR---LGEPKEVSSLVAFLCMPAASYITGQTVCI  258 (270)
Q Consensus       182 ~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~dva~~~~~l~s~~~~~~~G~~i~v  258 (270)
                      +       ..++.+..+.++.+..+.....  .......+......+.   ....+|++++++.++...   .+| ++++
T Consensus       118 ~-------~~~~p~~ILR~~nVYGp~~~~~--~~r~I~~~l~~~~~~~pI~vIyVdDvv~alv~al~~~---~~G-iyNI  184 (699)
T PRK12320        118 S-------TGWAPSLVIRIAPPVGRQLDWM--VCRTVATLLRSKVSARPIRVLHLDDLVRFLVLALNTD---RNG-VVDL  184 (699)
T ss_pred             H-------hcCCCEEEEeCceecCCCCccc--HhHHHHHHHHHHHcCCceEEEEHHHHHHHHHHHHhCC---CCC-EEEE
Confidence            2       1347788888888877632211  1122222221111122   237899999998888542   245 9999


Q ss_pred             cCCccccc
Q 024230          259 DGGFTVNG  266 (270)
Q Consensus       259 dgG~~~~~  266 (270)
                      .||..++.
T Consensus       185 G~~~~~Si  192 (699)
T PRK12320        185 ATPDTTNV  192 (699)
T ss_pred             eCCCeeEH
Confidence            99876543

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.34  E-value=4.6e-11  Score=99.17  Aligned_cols=225  Identities=12%  Similarity=0.048  Sum_probs=156.7

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHC--CCeEEEeeCChh-HHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSML--GATVHTCSRTET-ELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~--G~~v~l~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .+.|+++||||+|.||...++.++.+  .++.+.++.-.= ......++.+ ...+..++..|+.++..+.-++.+    
T Consensus         4 ~~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~-n~p~ykfv~~di~~~~~~~~~~~~----   78 (331)
T KOG0747|consen    4 YKEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVR-NSPNYKFVEGDIADADLVLYLFET----   78 (331)
T ss_pred             CccceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhc-cCCCceEeeccccchHHHHhhhcc----
Confidence            34499999999999999999998887  334443322100 0012222222 245788999999998887777754    


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC----------
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA----------  164 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~----------  164 (270)
                        .++|.++|-|+..........+    .+....|++++..++.+....-   +..++|.+|+..-+...          
T Consensus        79 --~~id~vihfaa~t~vd~s~~~~----~~~~~nnil~t~~Lle~~~~sg---~i~~fvhvSTdeVYGds~~~~~~~E~s  149 (331)
T KOG0747|consen   79 --EEIDTVIHFAAQTHVDRSFGDS----FEFTKNNILSTHVLLEAVRVSG---NIRRFVHVSTDEVYGDSDEDAVVGEAS  149 (331)
T ss_pred             --CchhhhhhhHhhhhhhhhcCch----HHHhcCCchhhhhHHHHHHhcc---CeeEEEEecccceecCccccccccccc
Confidence              6899999999986543222222    3457789999999988885332   34579999998655332          


Q ss_pred             --CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcC---------CCCCCCCh
Q 024230          165 --NVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRT---------PMGRLGEP  233 (270)
Q Consensus       165 --~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~  233 (270)
                        .....|+++|+|.+++.+|+.+.+   |+.|..+.-+.|..|...+..--++++.......         .++..+..
T Consensus       150 ~~nPtnpyAasKaAaE~~v~Sy~~sy---~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~v  226 (331)
T KOG0747|consen  150 LLNPTNPYAASKAAAEMLVRSYGRSY---GLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYV  226 (331)
T ss_pred             cCCCCCchHHHHHHHHHHHHHHhhcc---CCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeH
Confidence              223579999999999999998764   7889988888888887776655565555332222         23445569


Q ss_pred             HhHHHHHHHHhCCCCCCccCcEEeecCCc
Q 024230          234 KEVSSLVAFLCMPAASYITGQTVCIDGGF  262 (270)
Q Consensus       234 ~dva~~~~~l~s~~~~~~~G~~i~vdgG~  262 (270)
                      +|+.+++...+..   .-.|+++++.--.
T Consensus       227 eD~~ea~~~v~~K---g~~geIYNIgtd~  252 (331)
T KOG0747|consen  227 EDVSEAFKAVLEK---GELGEIYNIGTDD  252 (331)
T ss_pred             HHHHHHHHHHHhc---CCccceeeccCcc
Confidence            9999999888754   3479999886433

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.33  E-value=7e-11  Score=101.62  Aligned_cols=195  Identities=11%  Similarity=0.073  Sum_probs=121.7

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc-cc
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK-LN  100 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~-id  100 (270)
                      +|+||||+|.+|+.++++|+++|++|.+++|+++....         ..+..+.+|+.|++++..+++.... + .. +|
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~---------~~~~~~~~d~~d~~~l~~a~~~~~~-~-~g~~d   69 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAG---------PNEKHVKFDWLDEDTWDNPFSSDDG-M-EPEIS   69 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccC---------CCCccccccCCCHHHHHHHHhcccC-c-CCcee
Confidence            48999999999999999999999999999999875321         1344567899999999988865322 2 34 89


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHHHHH
Q 024230          101 IFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQL  180 (270)
Q Consensus       101 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal~~~  180 (270)
                      .++++++...       ..  .+            ..+.+++.+++.+..+||++||.....+.       ..+...+.+
T Consensus        70 ~v~~~~~~~~-------~~--~~------------~~~~~i~aa~~~gv~~~V~~Ss~~~~~~~-------~~~~~~~~~  121 (285)
T TIGR03649        70 AVYLVAPPIP-------DL--AP------------PMIKFIDFARSKGVRRFVLLSASIIEKGG-------PAMGQVHAH  121 (285)
T ss_pred             EEEEeCCCCC-------Ch--hH------------HHHHHHHHHHHcCCCEEEEeeccccCCCC-------chHHHHHHH
Confidence            9999876421       10  00            11233444466667789999886543321       122222222


Q ss_pred             HHHHHHHHccCCceEEEEecCcccCCCCcccc-----CChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcE
Q 024230          181 AKNLACEWAKDNIRTNSVAPWYIRTPFTEPLL-----GNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT  255 (270)
Q Consensus       181 ~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  255 (270)
                      .++      ..|+....+.|+++..++.....     .......  ........+.+++|+++++..++.+..  ..|..
T Consensus       122 l~~------~~gi~~tilRp~~f~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~~v~~~Dva~~~~~~l~~~~--~~~~~  191 (285)
T TIGR03649       122 LDS------LGGVEYTVLRPTWFMENFSEEFHVEAIRKENKIYS--ATGDGKIPFVSADDIARVAYRALTDKV--APNTD  191 (285)
T ss_pred             HHh------ccCCCEEEEeccHHhhhhcccccccccccCCeEEe--cCCCCccCcccHHHHHHHHHHHhcCCC--cCCCe
Confidence            221      13899999999988766532211     0011100  000111236689999999999886532  23566


Q ss_pred             EeecCCcccc
Q 024230          256 VCIDGGFTVN  265 (270)
Q Consensus       256 i~vdgG~~~~  265 (270)
                      +.+-|+..++
T Consensus       192 ~~l~g~~~~s  201 (285)
T TIGR03649       192 YVVLGPELLT  201 (285)
T ss_pred             EEeeCCccCC
Confidence            6666655443

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.31  E-value=9.1e-11  Score=100.89  Aligned_cols=209  Identities=14%  Similarity=0.079  Sum_probs=120.5

Q ss_pred             EEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcccEE
Q 024230           23 ALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIF  102 (270)
Q Consensus        23 vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~l  102 (270)
                      ||||||+|.||.++++.|+++|++|++++|+++......    .    ..  ..|+.. .       .+...+ ..+|++
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~----~~--~~~~~~-~-------~~~~~~-~~~D~V   61 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK----W----EG--YKPWAP-L-------AESEAL-EGADAV   61 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc----c----ee--eecccc-c-------chhhhc-CCCCEE
Confidence            689999999999999999999999999999877543211    0    00  112211 1       112233 579999


Q ss_pred             EECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--cEEEEecCccccccC----------C-CChh
Q 024230          103 VNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGA--ASIVLMSSALGIVSA----------N-VGTV  169 (270)
Q Consensus       103 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~--g~ii~iss~~~~~~~----------~-~~~~  169 (270)
                      ||+|+.....  ...+.+...+.+++|+.++.++++++    .+.+.  ..+|+.|+...+...          + ....
T Consensus        62 vh~a~~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~  135 (292)
T TIGR01777        62 INLAGEPIAD--KRWTEERKQEIRDSRIDTTRALVEAI----AAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDF  135 (292)
T ss_pred             EECCCCCccc--ccCCHHHHHHHHhcccHHHHHHHHHH----HhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCCh
Confidence            9999974321  12344455677899999999888888    34432  234444443222111          0 0112


Q ss_pred             hhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHH--------hhcCCCCCCCChHhHHHHHH
Q 024230          170 YSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEV--------KSRTPMGRLGEPKEVSSLVA  241 (270)
Q Consensus       170 y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~dva~~~~  241 (270)
                      |+..+...+...+    .+...++.+..+.|+.+..+-. ...  ......+        ........+...+|+++++.
T Consensus       136 ~~~~~~~~e~~~~----~~~~~~~~~~ilR~~~v~G~~~-~~~--~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i~  208 (292)
T TIGR01777       136 LAELCRDWEEAAQ----AAEDLGTRVVLLRTGIVLGPKG-GAL--AKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLIL  208 (292)
T ss_pred             HHHHHHHHHHHhh----hchhcCCceEEEeeeeEECCCc-chh--HHHHHHHhcCcccccCCCCcccccEeHHHHHHHHH
Confidence            2223333333322    2234579999999999877631 110  1111001        01112234567999999999


Q ss_pred             HHhCCCCCCccCcEEeecCCccccc
Q 024230          242 FLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       242 ~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                      .++....  .. .++++-++..++.
T Consensus       209 ~~l~~~~--~~-g~~~~~~~~~~s~  230 (292)
T TIGR01777       209 FALENAS--IS-GPVNATAPEPVRN  230 (292)
T ss_pred             HHhcCcc--cC-CceEecCCCccCH
Confidence            9985422  23 4677777665543

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.31  E-value=1.4e-10  Score=100.50  Aligned_cols=167  Identities=18%  Similarity=0.181  Sum_probs=123.1

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCC-CeEEEeeCChh---HHHHHHHHHH-------hcCCeEEEEEccCCC------HHH
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLG-ATVHTCSRTET---ELNECIHHLQ-------MKGLKVTGSVCDVSS------RPQ   83 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G-~~v~l~~r~~~---~~~~~~~~~~-------~~~~~~~~~~~D~~~------~~~   83 (270)
                      +++++|||+|.+|..+..+|+.+- ++|+++.|..+   ..+++.+.++       ....++..+..|++.      +..
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            579999999999999998888875 58999988655   3444555554       235789999999984      344


Q ss_pred             HHHHHHHHHHHcCCcccEEEECCCCCC-CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccc
Q 024230           84 RQTLINTVSSLFNGKLNIFVNNVGTSV-LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIV  162 (270)
Q Consensus        84 ~~~~~~~i~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~  162 (270)
                      .+.+.        +.+|.+|||++... ..|        ..+....|+.|+..+++.+    ...+...+.+|||++...
T Consensus        81 ~~~La--------~~vD~I~H~gA~Vn~v~p--------Ys~L~~~NVlGT~evlrLa----~~gk~Kp~~yVSsisv~~  140 (382)
T COG3320          81 WQELA--------ENVDLIIHNAALVNHVFP--------YSELRGANVLGTAEVLRLA----ATGKPKPLHYVSSISVGE  140 (382)
T ss_pred             HHHHh--------hhcceEEecchhhcccCc--------HHHhcCcchHhHHHHHHHH----hcCCCceeEEEeeeeecc
Confidence            44444        57899999998754 333        4455679999999998877    334334599999987532


Q ss_pred             cC--------------------CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccc
Q 024230          163 SA--------------------NVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPL  211 (270)
Q Consensus       163 ~~--------------------~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~  211 (270)
                      ..                    .....|+-||.+.|-+++....    .|+++..+.||++-.+-..+.
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~----rGLpv~I~Rpg~I~gds~tG~  205 (382)
T COG3320         141 TEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGD----RGLPVTIFRPGYITGDSRTGA  205 (382)
T ss_pred             ccccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHhh----cCCCeEEEecCeeeccCccCc
Confidence            21                    1126799999999999987654    489999999999977654333

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.30  E-value=5.4e-10  Score=89.27  Aligned_cols=168  Identities=18%  Similarity=0.111  Sum_probs=116.4

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      ++++||||+ |+|..+++.|+++|++|++++|+++..+.+...+.. ..++.++.+|++|++++.++++.+.+.+ +++|
T Consensus         1 m~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~-~~~i~~~~~Dv~d~~sv~~~i~~~l~~~-g~id   77 (177)
T PRK08309          1 MHALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT-PESITPLPLDYHDDDALKLAIKSTIEKN-GPFD   77 (177)
T ss_pred             CEEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc-CCcEEEEEccCCCHHHHHHHHHHHHHHc-CCCe
Confidence            469999998 677789999999999999999998877666655543 4578889999999999999999998887 7899


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc----EEEEecCccccccCCCChhhhhhHHH
Q 024230          101 IFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAA----SIVLMSSALGIVSANVGTVYSATKGA  176 (270)
Q Consensus       101 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g----~ii~iss~~~~~~~~~~~~y~~sKaa  176 (270)
                      .+|+.+-..                      ++-.+.+++    ++.+..    +++.+-.+.+..+             
T Consensus        78 ~lv~~vh~~----------------------~~~~~~~~~----~~~gv~~~~~~~~h~~gs~~~~~-------------  118 (177)
T PRK08309         78 LAVAWIHSS----------------------AKDALSVVC----RELDGSSETYRLFHVLGSAASDP-------------  118 (177)
T ss_pred             EEEEecccc----------------------chhhHHHHH----HHHccCCCCceEEEEeCCcCCch-------------
Confidence            999876542                      222333333    333322    6777654433111             


Q ss_pred             HHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCC-CCCCccCc
Q 024230          177 MNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP-AASYITGQ  254 (270)
Q Consensus       177 l~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~-~~~~~~G~  254 (270)
                           +.....+...+....-|..|++.+.-..                   |+++-+||++.++.-... .+.++.|+
T Consensus       119 -----~~~~~~~~~~~~~~~~i~lgf~~~~~~~-------------------rwlt~~ei~~gv~~~~~~~~~~~~~g~  173 (177)
T PRK08309        119 -----RIPSEKIGPARCSYRRVILGFVLEDTYS-------------------RWLTHEEISDGVIKAIESDADEHVVGT  173 (177)
T ss_pred             -----hhhhhhhhhcCCceEEEEEeEEEeCCcc-------------------ccCchHHHHHHHHHHHhcCCCeEEEEE
Confidence                 1112233344567777889988875332                   456778888888777753 45555554

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.24  E-value=8.9e-10  Score=105.77  Aligned_cols=198  Identities=12%  Similarity=0.083  Sum_probs=121.9

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      .++|||||++|.||+++++.|.++|++|...                        ..|++|.+.+...+..      .++
T Consensus       380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~------------------------~~~l~d~~~v~~~i~~------~~p  429 (668)
T PLN02260        380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG------------------------KGRLEDRSSLLADIRN------VKP  429 (668)
T ss_pred             CceEEEECCCchHHHHHHHHHHhCCCeEEee------------------------ccccccHHHHHHHHHh------hCC
Confidence            3579999999999999999999999887311                        1357777777666544      378


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccc-----------c-----
Q 024230          100 NIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIV-----------S-----  163 (270)
Q Consensus       100 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~-----------~-----  163 (270)
                      |++||+|+....... +...++-++.+++|+.++.++++++.    +.+. +++++||...+.           +     
T Consensus       430 d~Vih~Aa~~~~~~~-~~~~~~~~~~~~~N~~gt~~l~~a~~----~~g~-~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~  503 (668)
T PLN02260        430 THVFNAAGVTGRPNV-DWCESHKVETIRANVVGTLTLADVCR----ENGL-LMMNFATGCIFEYDAKHPEGSGIGFKEED  503 (668)
T ss_pred             CEEEECCcccCCCCC-ChHHhCHHHHHHHHhHHHHHHHHHHH----HcCC-eEEEEcccceecCCcccccccCCCCCcCC
Confidence            999999997542211 22233456789999999999999984    3333 456665543211           1     


Q ss_pred             --CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcC---CC-CCCCChHhHH
Q 024230          164 --ANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRT---PM-GRLGEPKEVS  237 (270)
Q Consensus       164 --~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~dva  237 (270)
                        .+....|+.||.+.+.+++.+..   ...+|+..+..+....        ...+...+....   .. ......+++.
T Consensus       504 ~~~~~~~~Yg~sK~~~E~~~~~~~~---~~~~r~~~~~~~~~~~--------~~nfv~~~~~~~~~~~vp~~~~~~~~~~  572 (668)
T PLN02260        504 KPNFTGSFYSKTKAMVEELLREYDN---VCTLRVRMPISSDLSN--------PRNFITKISRYNKVVNIPNSMTVLDELL  572 (668)
T ss_pred             CCCCCCChhhHHHHHHHHHHHhhhh---heEEEEEEecccCCCC--------ccHHHHHHhccceeeccCCCceehhhHH
Confidence              01225799999999999987642   2345655554222111        112222211110   11 1133455566


Q ss_pred             HHHHHHhCCCCCCccCcEEeecCCccccccc
Q 024230          238 SLVAFLCMPAASYITGQTVCIDGGFTVNGFF  268 (270)
Q Consensus       238 ~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~~  268 (270)
                      .+++.++...    .|.++++.++..+++-+
T Consensus       573 ~~~~~l~~~~----~~giyni~~~~~~s~~e  599 (668)
T PLN02260        573 PISIEMAKRN----LRGIWNFTNPGVVSHNE  599 (668)
T ss_pred             HHHHHHHHhC----CCceEEecCCCcCcHHH
Confidence            6656666421    25789988777666544

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.24  E-value=5.7e-10  Score=104.45  Aligned_cols=222  Identities=14%  Similarity=0.159  Sum_probs=138.9

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCC---eEEEeeCChhH---HHHHHHHH---------Hh-c--------CCeEE
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGA---TVHTCSRTETE---LNECIHHL---------QM-K--------GLKVT   72 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~---~v~l~~r~~~~---~~~~~~~~---------~~-~--------~~~~~   72 (270)
                      -++||+|+||||+|.||+.++++|++.+.   +|+++.|....   .+++..++         ++ .        ..++.
T Consensus       116 f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~  195 (605)
T PLN02503        116 FLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLV  195 (605)
T ss_pred             hhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEE
Confidence            46899999999999999999999998764   67888885432   22222222         11 1        24688


Q ss_pred             EEEccCCCHH------HHHHHHHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Q 024230           73 GSVCDVSSRP------QRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRA  146 (270)
Q Consensus        73 ~~~~D~~~~~------~~~~~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~  146 (270)
                      ++..|+++++      ..+.+.        ..+|++||+|+....       .+..+..+++|+.++.++++.+...   
T Consensus       196 ~v~GDl~d~~LGLs~~~~~~L~--------~~vDiVIH~AA~v~f-------~~~~~~a~~vNV~GT~nLLelA~~~---  257 (605)
T PLN02503        196 PVVGNVCESNLGLEPDLADEIA--------KEVDVIINSAANTTF-------DERYDVAIDINTRGPCHLMSFAKKC---  257 (605)
T ss_pred             EEEeeCCCcccCCCHHHHHHHH--------hcCCEEEECcccccc-------ccCHHHHHHHHHHHHHHHHHHHHHc---
Confidence            9999999862      333322        368999999997542       1346678999999999999887421   


Q ss_pred             cCCcEEEEecCccccccC---------C----------------------------------------------------
Q 024230          147 SGAASIVLMSSALGIVSA---------N----------------------------------------------------  165 (270)
Q Consensus       147 ~~~g~ii~iss~~~~~~~---------~----------------------------------------------------  165 (270)
                      .+...+|++||...+...         +                                                    
T Consensus       258 ~~lk~fV~vSTayVyG~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g  337 (605)
T PLN02503        258 KKLKLFLQVSTAYVNGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLG  337 (605)
T ss_pred             CCCCeEEEccCceeecCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcc
Confidence            123468888886432111         1                                                    


Q ss_pred             --------CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC---Chh----hHHHHhhcC-----
Q 024230          166 --------VGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG---NGK----FVDEVKSRT-----  225 (270)
Q Consensus       166 --------~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~---~~~----~~~~~~~~~-----  225 (270)
                              ....|.-+|+..|.+++..+     .++.+..+.|+.|.+....++.+   +..    .........     
T Consensus       338 ~~~~~~~~~pNtYt~TK~lAE~lV~~~~-----~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~  412 (605)
T PLN02503        338 LERAKLYGWQDTYVFTKAMGEMVINSMR-----GDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFL  412 (605)
T ss_pred             cchhhhCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEE
Confidence                    00247777777777776422     37999999999886654433321   100    010010000     


Q ss_pred             ----CCCCCCChHhHHHHHHHHhCC--CCCCccCcEEeecCC
Q 024230          226 ----PMGRLGEPKEVSSLVAFLCMP--AASYITGQTVCIDGG  261 (270)
Q Consensus       226 ----~~~~~~~~~dva~~~~~l~s~--~~~~~~G~~i~vdgG  261 (270)
                          -.-...+.+.++++++..+..  ......++++++-.+
T Consensus       413 ~~~~~~~DiVPVD~vvna~i~a~a~~~~~~~~~~~vYn~ts~  454 (605)
T PLN02503        413 ADPNGVLDVVPADMVVNATLAAMAKHGGAAKPEINVYQIASS  454 (605)
T ss_pred             eCCCeeEeEEeecHHHHHHHHHHHhhhcccCCCCCEEEeCCC
Confidence                011133578888888776321  111236899999877

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.21  E-value=5.4e-11  Score=98.85  Aligned_cols=107  Identities=16%  Similarity=0.167  Sum_probs=80.7

Q ss_pred             EEEEecC-CCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           22 TALVTGG-TKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        22 ~vlItG~-s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      +=.||.. +||||+++|+.|+++|++|+++++...        +....    ...+|+++.++++++++++.+.+ +++|
T Consensus        16 VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--------l~~~~----~~~~Dv~d~~s~~~l~~~v~~~~-g~iD   82 (227)
T TIGR02114        16 VRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA--------LKPEP----HPNLSIREIETTKDLLITLKELV-QEHD   82 (227)
T ss_pred             ceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh--------ccccc----CCcceeecHHHHHHHHHHHHHHc-CCCC
Confidence            3345554 678999999999999999999986311        11100    13589999999999999999888 7999


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 024230          101 IFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLL  144 (270)
Q Consensus       101 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m  144 (270)
                      ++|||||+....++.+.+.++|++++.   .+.+.+.+..-..+
T Consensus        83 iLVnnAgv~d~~~~~~~s~e~~~~~~~---~~~~~~~~~~~~Ki  123 (227)
T TIGR02114        83 ILIHSMAVSDYTPVYMTDLEQVQASDN---LNEFLSKQNHEAKI  123 (227)
T ss_pred             EEEECCEeccccchhhCCHHHHhhhcc---hhhhhccccccCCc
Confidence            999999998788888999999987744   45566555443333

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.11  E-value=6.6e-10  Score=92.49  Aligned_cols=214  Identities=15%  Similarity=0.102  Sum_probs=140.4

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHH--HHH--HHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETEL--NEC--IHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~--~~~--~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      ++|++||||-+|--|.-+|+.|+++|+.|+.+.|+....  ..+  .+.-.....+++.+..|++|..++..+++++   
T Consensus         1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v---   77 (345)
T COG1089           1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV---   77 (345)
T ss_pred             CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc---
Confidence            469999999999999999999999999999998875432  211  1111112345889999999999999888874   


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccc---------cCC
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIV---------SAN  165 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~---------~~~  165 (270)
                         .+|-+.|.|+.....    .+.+..+.+.+++..|+++++.+..-+-  .+.-++..-||+.-+.         ..|
T Consensus        78 ---~PdEIYNLaAQS~V~----vSFe~P~~T~~~~~iGtlrlLEaiR~~~--~~~~rfYQAStSE~fG~v~~~pq~E~TP  148 (345)
T COG1089          78 ---QPDEIYNLAAQSHVG----VSFEQPEYTADVDAIGTLRLLEAIRILG--EKKTRFYQASTSELYGLVQEIPQKETTP  148 (345)
T ss_pred             ---Cchhheecccccccc----ccccCcceeeeechhHHHHHHHHHHHhC--CcccEEEecccHHhhcCcccCccccCCC
Confidence               789999999986554    3555556788899999999988873221  1123455555543211         122


Q ss_pred             --CChhhhhhHHHHHHHHHHHHHHHc---cCCceEEEEecCcccCCCCccccCChhhHHHHhhc----------CCCCCC
Q 024230          166 --VGTVYSATKGAMNQLAKNLACEWA---KDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSR----------TPMGRL  230 (270)
Q Consensus       166 --~~~~y~~sKaal~~~~~sla~el~---~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~----------~~~~~~  230 (270)
                        ..+.|++||....=++..+...+.   -.||-.|.=+|.-=.|-.++.+.   .....++..          ...+.+
T Consensus       149 FyPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt---~ava~Ik~G~q~~l~lGNldAkRDW  225 (345)
T COG1089         149 FYPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKIT---RAVARIKLGLQDKLYLGNLDAKRDW  225 (345)
T ss_pred             CCCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHH---HHHHHHHccccceEEeccccccccc
Confidence              346899999988888777766553   23455555455432332333321   111122111          123457


Q ss_pred             CChHhHHHHHHHHhCCC
Q 024230          231 GEPKEVSSLVAFLCMPA  247 (270)
Q Consensus       231 ~~~~dva~~~~~l~s~~  247 (270)
                      +.+.|.+++++..+..+
T Consensus       226 G~A~DYVe~mwlmLQq~  242 (345)
T COG1089         226 GHAKDYVEAMWLMLQQE  242 (345)
T ss_pred             cchHHHHHHHHHHHccC
Confidence            77899999997777643

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.10  E-value=2.9e-09  Score=88.66  Aligned_cols=208  Identities=15%  Similarity=0.125  Sum_probs=135.2

Q ss_pred             ccccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Q 024230           12 RQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTV   91 (270)
Q Consensus        12 ~~~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i   91 (270)
                      +...+..++++|+||||+|.||.+|+..|..+|++|+.++.--..-......+... ..+..+.-|+..+     ++   
T Consensus        19 ~~~~~p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~-~~fel~~hdv~~p-----l~---   89 (350)
T KOG1429|consen   19 REQVKPSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGH-PNFELIRHDVVEP-----LL---   89 (350)
T ss_pred             hhcccCCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccC-cceeEEEeechhH-----HH---
Confidence            34456788899999999999999999999999999999987554433333333221 3455566666654     33   


Q ss_pred             HHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC-------
Q 024230           92 SSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA-------  164 (270)
Q Consensus        92 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~-------  164 (270)
                           ..+|-++|.|+......+..-+    -+++..|+.++.+.+..+.+    - +.+++..|++.-|...       
T Consensus        90 -----~evD~IyhLAapasp~~y~~np----vktIktN~igtln~lglakr----v-~aR~l~aSTseVYgdp~~hpq~e  155 (350)
T KOG1429|consen   90 -----KEVDQIYHLAAPASPPHYKYNP----VKTIKTNVIGTLNMLGLAKR----V-GARFLLASTSEVYGDPLVHPQVE  155 (350)
T ss_pred             -----HHhhhhhhhccCCCCcccccCc----cceeeecchhhHHHHHHHHH----h-CceEEEeecccccCCcccCCCcc
Confidence                 3568888888765433322222    25677999999998877732    2 2467776666544221       


Q ss_pred             ---------CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChh----hHHHHhhcC------
Q 024230          165 ---------NVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGK----FVDEVKSRT------  225 (270)
Q Consensus       165 ---------~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~----~~~~~~~~~------  225 (270)
                               ...+.|...|...+-|+.+..++   .||-+....+-.+..|+.. +. ++.    +..+.....      
T Consensus       156 ~ywg~vnpigpr~cydegKr~aE~L~~~y~k~---~giE~rIaRifNtyGPrm~-~~-dgrvvsnf~~q~lr~epltv~g  230 (350)
T KOG1429|consen  156 TYWGNVNPIGPRSCYDEGKRVAETLCYAYHKQ---EGIEVRIARIFNTYGPRMH-MD-DGRVVSNFIAQALRGEPLTVYG  230 (350)
T ss_pred             ccccccCcCCchhhhhHHHHHHHHHHHHhhcc---cCcEEEEEeeecccCCccc-cC-CChhhHHHHHHHhcCCCeEEEc
Confidence                     12468999999999999887765   5777766666555555331 11 122    222222222      


Q ss_pred             ---CCCCCCChHhHHHHHHHHhCCC
Q 024230          226 ---PMGRLGEPKEVSSLVAFLCMPA  247 (270)
Q Consensus       226 ---~~~~~~~~~dva~~~~~l~s~~  247 (270)
                         ..+.+...+|+.+.++.|...+
T Consensus       231 ~G~qtRSF~yvsD~Vegll~Lm~s~  255 (350)
T KOG1429|consen  231 DGKQTRSFQYVSDLVEGLLRLMESD  255 (350)
T ss_pred             CCcceEEEEeHHHHHHHHHHHhcCC
Confidence               2345667899999999998543

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.09  E-value=5.7e-10  Score=107.16  Aligned_cols=166  Identities=17%  Similarity=0.218  Sum_probs=142.0

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCe-EEEeeCChhHH---HHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGAT-VHTCSRTETEL---NECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~~-v~l~~r~~~~~---~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      -..|.++|+||-||.|.++|.+|.++|++ +++++|+.-+.   .....-.++.|.++.+-..|++..+..+.++++..+
T Consensus      1766 hpeksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~k 1845 (2376)
T KOG1202|consen 1766 HPEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESNK 1845 (2376)
T ss_pred             CccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhhh
Confidence            35699999999999999999999999996 89999986543   333455566788999999999999999999987655


Q ss_pred             HcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhh
Q 024230           94 LFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                      .  +++..++|.|.+..++-+++.+++.|++.-...+.++.++-+.-.++...  -.-+|..||...-++..++..|+.+
T Consensus      1846 l--~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~--LdyFv~FSSvscGRGN~GQtNYG~a 1921 (2376)
T KOG1202|consen 1846 L--GPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPE--LDYFVVFSSVSCGRGNAGQTNYGLA 1921 (2376)
T ss_pred             c--ccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcc--cceEEEEEeecccCCCCcccccchh
Confidence            4  79999999999999999999999999999999999999998888776654  3578888998888888899999999


Q ss_pred             HHHHHHHHHHHHHH
Q 024230          174 KGAMNQLAKNLACE  187 (270)
Q Consensus       174 Kaal~~~~~sla~e  187 (270)
                      +++++-++..-..+
T Consensus      1922 NS~MERiceqRr~~ 1935 (2376)
T KOG1202|consen 1922 NSAMERICEQRRHE 1935 (2376)
T ss_pred             hHHHHHHHHHhhhc
Confidence            99999999875433

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.07  E-value=2.2e-09  Score=89.30  Aligned_cols=198  Identities=16%  Similarity=0.151  Sum_probs=113.1

Q ss_pred             EEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcccEE
Q 024230           23 ALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIF  102 (270)
Q Consensus        23 vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~l  102 (270)
                      |+||||+|-||++++.+|.+.|++|.+++|++.......      ...+       ..       .+.+.+.....+|++
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~------~~~v-------~~-------~~~~~~~~~~~~Dav   60 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNL------HPNV-------TL-------WEGLADALTLGIDAV   60 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhc------Cccc-------cc-------cchhhhcccCCCCEE
Confidence            689999999999999999999999999999988654311      1011       11       111222221269999


Q ss_pred             EECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCccccccCCCChhhhhhHH----HH
Q 024230          103 VNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIVSANVGTVYSATKG----AM  177 (270)
Q Consensus       103 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~~~~~~~~~~~y~~sKa----al  177 (270)
                      ||.||..-...  ..+.+.=+..+    .|-...++.+.+.+.+.+ +.++..-+|..++++......|.-...    .+
T Consensus        61 INLAG~~I~~r--rWt~~~K~~i~----~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fl  134 (297)
T COG1090          61 INLAGEPIAER--RWTEKQKEEIR----QSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFL  134 (297)
T ss_pred             EECCCCccccc--cCCHHHHHHHH----HHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChH
Confidence            99999743211  13443333333    445555666666666443 345555566667766544333322222    34


Q ss_pred             HHHHHHHHHHHc---cCCceEEEEecCcccCCCCccccCChhhH-----HHHhhcCCCCCCCChHhHHHHHHHHhCC
Q 024230          178 NQLAKNLACEWA---KDNIRTNSVAPWYIRTPFTEPLLGNGKFV-----DEVKSRTPMGRLGEPKEVSSLVAFLCMP  246 (270)
Q Consensus       178 ~~~~~sla~el~---~~~i~v~~v~pG~v~t~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (270)
                      ..+++.+-.+--   ..|+||+.+.-|.|-++-...+.......     ..+-+....-.+...||+++++.|+...
T Consensus       135 a~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~  211 (297)
T COG1090         135 AQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLEN  211 (297)
T ss_pred             HHHHHHHHHHHhhhhhcCceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHHhC
Confidence            445555444332   34899999999988764221111110000     0111111222345689999999999964

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.04  E-value=2.1e-09  Score=89.76  Aligned_cols=199  Identities=18%  Similarity=0.190  Sum_probs=121.2

Q ss_pred             EEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcccEE
Q 024230           23 ALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIF  102 (270)
Q Consensus        23 vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~l  102 (270)
                      |+|+|++|.+|+.+++.|++.|++|.++.|+..+  +..++++..|.  ..+.+|..|.+++.+++        ..+|.+
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~--~~~~~l~~~g~--~vv~~d~~~~~~l~~al--------~g~d~v   68 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSS--DRAQQLQALGA--EVVEADYDDPESLVAAL--------KGVDAV   68 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHH--HHHHHHHHTTT--EEEES-TT-HHHHHHHH--------TTCSEE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccch--hhhhhhhcccc--eEeecccCCHHHHHHHH--------cCCceE
Confidence            7999999999999999999999999999999843  33445555554  45699999999988888        689999


Q ss_pred             EECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC-CC--ChhhhhhHHHHHH
Q 024230          103 VNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA-NV--GTVYSATKGAMNQ  179 (270)
Q Consensus       103 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~-~~--~~~y~~sKaal~~  179 (270)
                      +++.+....      .          -......+++++    ++.+-.++|+.+-....... ..  ...+-..|..++.
T Consensus        69 ~~~~~~~~~------~----------~~~~~~~li~Aa----~~agVk~~v~ss~~~~~~~~~~~~p~~~~~~~k~~ie~  128 (233)
T PF05368_consen   69 FSVTPPSHP------S----------ELEQQKNLIDAA----KAAGVKHFVPSSFGADYDESSGSEPEIPHFDQKAEIEE  128 (233)
T ss_dssp             EEESSCSCC------C----------HHHHHHHHHHHH----HHHT-SEEEESEESSGTTTTTTSTTHHHHHHHHHHHHH
T ss_pred             EeecCcchh------h----------hhhhhhhHHHhh----hccccceEEEEEecccccccccccccchhhhhhhhhhh
Confidence            999886431      1          111223445555    44455677753333333111 11  1122245666655


Q ss_pred             HHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHH---HHhhcCCCC---CC-CChHhHHHHHHHHhCCCCCCcc
Q 024230          180 LAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVD---EVKSRTPMG---RL-GEPKEVSSLVAFLCMPAASYIT  252 (270)
Q Consensus       180 ~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~---~~~~~~~~~---~~-~~~~dva~~~~~l~s~~~~~~~  252 (270)
                      +.+.       .++..+.|.||+........+........   .+....+..   .. .+.+|+++.+..++.+...+-+
T Consensus       129 ~l~~-------~~i~~t~i~~g~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~  201 (233)
T PF05368_consen  129 YLRE-------SGIPYTIIRPGFFMENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNN  201 (233)
T ss_dssp             HHHH-------CTSEBEEEEE-EEHHHHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTE
T ss_pred             hhhh-------ccccceeccccchhhhhhhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcC
Confidence            5544       38999999999776543322211000000   000011111   22 2689999999999988555557


Q ss_pred             CcEEeecC
Q 024230          253 GQTVCIDG  260 (270)
Q Consensus       253 G~~i~vdg  260 (270)
                      |..+.+-|
T Consensus       202 ~~~~~~~~  209 (233)
T PF05368_consen  202 GKTIFLAG  209 (233)
T ss_dssp             EEEEEEGG
T ss_pred             CEEEEeCC
Confidence            88888755

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.86  E-value=2e-08  Score=86.57  Aligned_cols=86  Identities=15%  Similarity=0.200  Sum_probs=67.7

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCe-EEEeeCCh---hHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGAT-VHTCSRTE---TELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINT   90 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~-v~l~~r~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   90 (270)
                      +.++++|+++|+|+ ||+|++++..|++.|++ |++++|+.   ++.+++.+++...+..+....+|+++.+++++.+  
T Consensus       121 ~~~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~--  197 (289)
T PRK12548        121 GVDVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEI--  197 (289)
T ss_pred             CCCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhh--
Confidence            34688999999999 69999999999999996 99999997   6667777777555445556678888776665544  


Q ss_pred             HHHHcCCcccEEEECCCCC
Q 024230           91 VSSLFNGKLNIFVNNVGTS  109 (270)
Q Consensus        91 i~~~~~~~id~li~~ag~~  109 (270)
                            ...|+||||....
T Consensus       198 ------~~~DilINaTp~G  210 (289)
T PRK12548        198 ------ASSDILVNATLVG  210 (289)
T ss_pred             ------ccCCEEEEeCCCC
Confidence                  4579999998654

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.78  E-value=3.1e-08  Score=88.75  Aligned_cols=83  Identities=22%  Similarity=0.269  Sum_probs=64.1

Q ss_pred             CCCCCCEEEEecC----------------CCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCC
Q 024230           16 WSLQGMTALVTGG----------------TKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVS   79 (270)
Q Consensus        16 ~~l~gk~vlItG~----------------s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~   79 (270)
                      -+|+||+++||||                +|.+|.++|++|+++|++|++++++.+ .+       .. .  ....+|++
T Consensus       184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-------~~-~--~~~~~dv~  252 (399)
T PRK05579        184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP-------TP-A--GVKRIDVE  252 (399)
T ss_pred             cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc-------CC-C--CcEEEccC
Confidence            4689999999999                555999999999999999999988753 11       11 1  13467999


Q ss_pred             CHHHHHHHHHHHHHHcCCcccEEEECCCCCCCCC
Q 024230           80 SRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKP  113 (270)
Q Consensus        80 ~~~~~~~~~~~i~~~~~~~id~li~~ag~~~~~~  113 (270)
                      +.+++.+.+.   +.+ +++|++|||||+....+
T Consensus       253 ~~~~~~~~v~---~~~-~~~DilI~~Aav~d~~~  282 (399)
T PRK05579        253 SAQEMLDAVL---AAL-PQADIFIMAAAVADYRP  282 (399)
T ss_pred             CHHHHHHHHH---Hhc-CCCCEEEEccccccccc
Confidence            9888777765   445 68999999999865444

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.75  E-value=1.2e-07  Score=76.94  Aligned_cols=86  Identities=21%  Similarity=0.200  Sum_probs=68.9

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      ..++++|+++|+|++|++|+.+++.|+++|++|++++|+.++.+++.+.+.... ......+|..+.+++.+.+      
T Consensus        23 ~~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~------   95 (194)
T cd01078          23 GKDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARF-GEGVGAVETSDDAARAAAI------   95 (194)
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhc-CCcEEEeeCCCHHHHHHHH------
Confidence            468899999999999999999999999999999999999988888877765321 2234457888887776666      


Q ss_pred             cCCcccEEEECCCCC
Q 024230           95 FNGKLNIFVNNVGTS  109 (270)
Q Consensus        95 ~~~~id~li~~ag~~  109 (270)
                        ...|++|++....
T Consensus        96 --~~~diVi~at~~g  108 (194)
T cd01078          96 --KGADVVFAAGAAG  108 (194)
T ss_pred             --hcCCEEEECCCCC
Confidence              4578999887643

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.75  E-value=1.4e-06  Score=79.72  Aligned_cols=243  Identities=18%  Similarity=0.149  Sum_probs=150.6

Q ss_pred             ccCCCCCCEEEEecCC-CcHHHHHHHHHHHCCCeEEEeeCC-hhHHHHHHHHHHh----cCCeEEEEEccCCCHHHHHHH
Q 024230           14 NRWSLQGMTALVTGGT-KGLGLAVVEELSMLGATVHTCSRT-ETELNECIHHLQM----KGLKVTGSVCDVSSRPQRQTL   87 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s-~giG~~la~~l~~~G~~v~l~~r~-~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~   87 (270)
                      ++.....|++||||++ +.||.+++..|+.-|++|+++..+ .+.-.++++.|..    .+....++.++.....+++.+
T Consensus       390 ~~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAl  469 (866)
T COG4982         390 NGGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDAL  469 (866)
T ss_pred             CCCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHH
Confidence            4567889999999998 679999999999999999887543 4444455555554    367799999999999999999


Q ss_pred             HHHHHHHcC-------------CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC---CcE
Q 024230           88 INTVSSLFN-------------GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG---AAS  151 (270)
Q Consensus        88 ~~~i~~~~~-------------~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~---~g~  151 (270)
                      ++.|-..-.             -.++.++--|+....+.+.+..... +-.+++-++....++-.+.+.-..++   +-+
T Consensus       470 IewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsra-E~~~rilLw~V~Rliggl~~~~s~r~v~~R~h  548 (866)
T COG4982         470 IEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRA-EFAMRILLWNVLRLIGGLKKQGSSRGVDTRLH  548 (866)
T ss_pred             HHHhccccccccCCcceecccccCcceeeecccCCccCccccCCchH-HHHHHHHHHHHHHHHHHhhhhccccCcccceE
Confidence            999844211             1266777666665555555544332 33455666666666665544332222   234


Q ss_pred             EEEecCc-cccccCCCChhhhhhHHHHHHHHHHHHHHHc-cCCceEEEEecCcccCCCCccccCChh-hHHHHhhcCCCC
Q 024230          152 IVLMSSA-LGIVSANVGTVYSATKGAMNQLAKNLACEWA-KDNIRTNSVAPWYIRTPFTEPLLGNGK-FVDEVKSRTPMG  228 (270)
Q Consensus       152 ii~iss~-~~~~~~~~~~~y~~sKaal~~~~~sla~el~-~~~i~v~~v~pG~v~t~~~~~~~~~~~-~~~~~~~~~~~~  228 (270)
                      +|.-.|. .+..  .+...|+-||++++.+..-+..|-. ..-+.+..-.-||++..   .++.... ..+.+...  --
T Consensus       549 VVLPgSPNrG~F--GgDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGT---GLMg~Ndiiv~aiEk~--GV  621 (866)
T COG4982         549 VVLPGSPNRGMF--GGDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGT---GLMGHNDIIVAAIEKA--GV  621 (866)
T ss_pred             EEecCCCCCCcc--CCCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeeccc---cccCCcchhHHHHHHh--Cc
Confidence            5543332 2232  2467899999999999987776632 11144444445777643   3333222 22222211  12


Q ss_pred             CCCChHhHHHHHHHHhCCCCCCc-cC--cEEeecCCccc
Q 024230          229 RLGEPKEVSSLVAFLCMPAASYI-TG--QTVCIDGGFTV  264 (270)
Q Consensus       229 ~~~~~~dva~~~~~l~s~~~~~~-~G--~~i~vdgG~~~  264 (270)
                      +.-+++|++..++-|++.+..-. -.  -...+.||+..
T Consensus       622 ~tyS~~EmA~~LLgL~saev~e~a~~~PI~aDLtGGL~~  660 (866)
T COG4982         622 RTYSTDEMAFNLLGLASAEVVELAASSPITADLTGGLGE  660 (866)
T ss_pred             eecCHHHHHHHHHhhccHHHHHHHhcCCeEeeccCcccc
Confidence            34578999999999997642211 12  23444577653

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.74  E-value=1.5e-06  Score=73.88  Aligned_cols=194  Identities=16%  Similarity=0.077  Sum_probs=123.1

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      ++|+||||+|.+|++++++|.++|++|+...|+++......       ..+.....|+.++.++...+        ..+|
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~-------~~v~~~~~d~~~~~~l~~a~--------~G~~   65 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-------GGVEVVLGDLRDPKSLVAGA--------KGVD   65 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc-------CCcEEEEeccCCHhHHHHHh--------cccc
Confidence            47999999999999999999999999999999999877644       46778889999999988877        5788


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHHHHH
Q 024230          101 IFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQL  180 (270)
Q Consensus       101 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal~~~  180 (270)
                      .++++.+... ....         .............+...     .+..+++.+|...+..  .....|..+|...+..
T Consensus        66 ~~~~i~~~~~-~~~~---------~~~~~~~~~~~~a~~a~-----~~~~~~~~~s~~~~~~--~~~~~~~~~~~~~e~~  128 (275)
T COG0702          66 GVLLISGLLD-GSDA---------FRAVQVTAVVRAAEAAG-----AGVKHGVSLSVLGADA--ASPSALARAKAAVEAA  128 (275)
T ss_pred             EEEEEecccc-cccc---------hhHHHHHHHHHHHHHhc-----CCceEEEEeccCCCCC--CCccHHHHHHHHHHHH
Confidence            8888877643 2110         11223333333333331     1234566666665544  2446789999998888


Q ss_pred             HHHHHHHHccCCceEEEEe-cCcccCCCCccccCChhhHHHHhhc---CCC----CCCCChHhHHHHHHHHhCCCCCCcc
Q 024230          181 AKNLACEWAKDNIRTNSVA-PWYIRTPFTEPLLGNGKFVDEVKSR---TPM----GRLGEPKEVSSLVAFLCMPAASYIT  252 (270)
Q Consensus       181 ~~sla~el~~~~i~v~~v~-pG~v~t~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~dva~~~~~l~s~~~~~~~  252 (270)
                      .++.       |+.-..+. ++++..... .+     ........   .+.    -.....+|++..+...+....  ..
T Consensus       129 l~~s-------g~~~t~lr~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~~--~~  193 (275)
T COG0702         129 LRSS-------GIPYTTLRRAAFYLGAGA-AF-----IEAAEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAPA--TA  193 (275)
T ss_pred             HHhc-------CCCeEEEecCeeeeccch-hH-----HHHHHhhCCceecCCCCceeeeEHHHHHHHHHHHhcCCc--cc
Confidence            7764       56544455 333332111 10     00111111   111    124467999998888775443  56


Q ss_pred             CcEEeecCC
Q 024230          253 GQTVCIDGG  261 (270)
Q Consensus       253 G~~i~vdgG  261 (270)
                      |+++.+-|=
T Consensus       194 ~~~~~l~g~  202 (275)
T COG0702         194 GRTYELAGP  202 (275)
T ss_pred             CcEEEccCC
Confidence            677766653

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.69  E-value=2.9e-07  Score=76.98  Aligned_cols=214  Identities=18%  Similarity=0.157  Sum_probs=137.8

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      -..++.|-++-|.||+|.+|+-++.+|++.|-+|++-.|..+..-.-.+-+-+ =+++.+...|+.|+++++++++    
T Consensus        55 GRsS~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGd-LGQvl~~~fd~~DedSIr~vvk----  129 (391)
T KOG2865|consen   55 GRSSVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGD-LGQVLFMKFDLRDEDSIRAVVK----  129 (391)
T ss_pred             CcccccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeeccc-ccceeeeccCCCCHHHHHHHHH----
Confidence            35688999999999999999999999999999999998876643332222211 2589999999999999999994    


Q ss_pred             HcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhh
Q 024230           94 LFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                          .-.++||..|.-.+.  .+++-+      ++|+.++-.+.+.+    ++.+..++|.+|+..+..  ...+.|=.|
T Consensus       130 ----~sNVVINLIGrd~eT--knf~f~------Dvn~~~aerlAric----ke~GVerfIhvS~Lganv--~s~Sr~Lrs  191 (391)
T KOG2865|consen  130 ----HSNVVINLIGRDYET--KNFSFE------DVNVHIAERLARIC----KEAGVERFIHVSCLGANV--KSPSRMLRS  191 (391)
T ss_pred             ----hCcEEEEeecccccc--CCcccc------cccchHHHHHHHHH----HhhChhheeehhhccccc--cChHHHHHh
Confidence                458999999974322  223333      37777777776666    666677899999998653  334567778


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCC--------CCCCChHhHHHHHHHHhC
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPM--------GRLGEPKEVSSLVAFLCM  245 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~dva~~~~~l~s  245 (270)
                      |++-+--++..   +.    ....|.|..+...--+-+.........+.. .|+        +.....-|+|.+++-.+.
T Consensus       192 K~~gE~aVrda---fP----eAtIirPa~iyG~eDrfln~ya~~~rk~~~-~pL~~~GekT~K~PVyV~DVaa~IvnAvk  263 (391)
T KOG2865|consen  192 KAAGEEAVRDA---FP----EATIIRPADIYGTEDRFLNYYASFWRKFGF-LPLIGKGEKTVKQPVYVVDVAAAIVNAVK  263 (391)
T ss_pred             hhhhHHHHHhh---CC----cceeechhhhcccchhHHHHHHHHHHhcCc-eeeecCCcceeeccEEEehHHHHHHHhcc
Confidence            87776655442   21    234456655543311111111111111111 111        122346788998888776


Q ss_pred             CCCCCccCcEEeecC
Q 024230          246 PAASYITGQTVCIDG  260 (270)
Q Consensus       246 ~~~~~~~G~~i~vdg  260 (270)
                      +.+  -.|.++..-|
T Consensus       264 Dp~--s~Gktye~vG  276 (391)
T KOG2865|consen  264 DPD--SMGKTYEFVG  276 (391)
T ss_pred             Ccc--ccCceeeecC
Confidence            542  3566665543

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.68  E-value=1.2e-07  Score=78.92  Aligned_cols=99  Identities=15%  Similarity=0.157  Sum_probs=67.3

Q ss_pred             EEEEecCCCc-HHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           22 TALVTGGTKG-LGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        22 ~vlItG~s~g-iG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      +=.||+.|+| +|.++|++|+++|++|++++|+.....       .....+.++.++  ..   +++.+.+.+.+ +.+|
T Consensus        17 VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~-------~~~~~v~~i~v~--s~---~~m~~~l~~~~-~~~D   83 (229)
T PRK06732         17 VRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP-------EPHPNLSIIEIE--NV---DDLLETLEPLV-KDHD   83 (229)
T ss_pred             ceeecCccchHHHHHHHHHHHhCCCEEEEEECcccccC-------CCCCCeEEEEEe--cH---HHHHHHHHHHh-cCCC
Confidence            5566766665 999999999999999999987642110       011234444432  22   22333344444 5799


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHH
Q 024230          101 IFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESA  133 (270)
Q Consensus       101 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~  133 (270)
                      ++|||||+....+....+.+++.+++++|.+..
T Consensus        84 ivIh~AAvsd~~~~~~~~~~~~~~~~~v~~~~~  116 (229)
T PRK06732         84 VLIHSMAVSDYTPVYMTDLEEVSASDNLNEFLT  116 (229)
T ss_pred             EEEeCCccCCceehhhhhhhhhhhhhhhhhhhc
Confidence            999999997766777778889999988876654

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.63  E-value=2.2e-06  Score=76.19  Aligned_cols=175  Identities=17%  Similarity=0.148  Sum_probs=110.5

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      ++...+..+|+|+||+|.+|+-+++.|.++|+.|..+.|+.+..++... +.........+..|...+.+....+   .+
T Consensus        73 ~~~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~-~~~~d~~~~~v~~~~~~~~d~~~~~---~~  148 (411)
T KOG1203|consen   73 NNNSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG-VFFVDLGLQNVEADVVTAIDILKKL---VE  148 (411)
T ss_pred             CCCCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc-ccccccccceeeeccccccchhhhh---hh
Confidence            4456777899999999999999999999999999999999988877655 1111122333445555444432222   22


Q ss_pred             HcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhh
Q 024230           94 LFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                      ....-..+++-|+|..+..-       ++...+.+.+.|..++++++    +.-+-.++++++|+.+.........+.. 
T Consensus       149 ~~~~~~~~v~~~~ggrp~~e-------d~~~p~~VD~~g~knlvdA~----~~aGvk~~vlv~si~~~~~~~~~~~~~~-  216 (411)
T KOG1203|consen  149 AVPKGVVIVIKGAGGRPEEE-------DIVTPEKVDYEGTKNLVDAC----KKAGVKRVVLVGSIGGTKFNQPPNILLL-  216 (411)
T ss_pred             hccccceeEEecccCCCCcc-------cCCCcceecHHHHHHHHHHH----HHhCCceEEEEEeecCcccCCCchhhhh-
Confidence            11123556666666543321       22233457778888888887    4555668999999887665444333331 


Q ss_pred             HHHHHHHH--HHHHHHHccCCceEEEEecCcccCC
Q 024230          174 KGAMNQLA--KNLACEWAKDNIRTNSVAPWYIRTP  206 (270)
Q Consensus       174 Kaal~~~~--~sla~el~~~~i~v~~v~pG~v~t~  206 (270)
                        ....+.  +...+++...|+....|.||....+
T Consensus       217 --~~~~~~~k~~~e~~~~~Sgl~ytiIR~g~~~~~  249 (411)
T KOG1203|consen  217 --NGLVLKAKLKAEKFLQDSGLPYTIIRPGGLEQD  249 (411)
T ss_pred             --hhhhhHHHHhHHHHHHhcCCCcEEEeccccccC
Confidence              111111  2334445567899999999876654

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.53  E-value=3.4e-07  Score=81.81  Aligned_cols=109  Identities=20%  Similarity=0.283  Sum_probs=73.2

Q ss_pred             CCCCCEEEEecC---------------CCc-HHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCC
Q 024230           17 SLQGMTALVTGG---------------TKG-LGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSS   80 (270)
Q Consensus        17 ~l~gk~vlItG~---------------s~g-iG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~   80 (270)
                      +++||+++||||               |+| +|.++|+.|..+|++|+++++.....         ...  ....+|+++
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~---------~~~--~~~~~~v~~  250 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL---------TPP--GVKSIKVST  250 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC---------CCC--CcEEEEecc
Confidence            589999999999               566 99999999999999999988765321         111  124579999


Q ss_pred             HHHH-HHHHHHHHHHcCCcccEEEECCCCCCCCCCCCCC--HHHHHHHHHHhhHHHHHHHHHH
Q 024230           81 RPQR-QTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYN--AEDFSLVMSTNFESAFHLCQLA  140 (270)
Q Consensus        81 ~~~~-~~~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~--~~~~~~~~~~n~~~~~~l~~~~  140 (270)
                      .+++ +++++++   + +++|++|+|||+....+....+  .....+.+.+|+...-=+++.+
T Consensus       251 ~~~~~~~~~~~~---~-~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l  309 (390)
T TIGR00521       251 AEEMLEAALNEL---A-KDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEV  309 (390)
T ss_pred             HHHHHHHHHHhh---c-ccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHH
Confidence            8888 5555332   3 6799999999997665542211  1111123445555555555555

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.45  E-value=3.1e-06  Score=76.37  Aligned_cols=178  Identities=20%  Similarity=0.234  Sum_probs=113.9

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCC---eEEEeeCChh---HHHHHHHHHH--------hc----CCeEEEEEccC
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGA---TVHTCSRTET---ELNECIHHLQ--------MK----GLKVTGSVCDV   78 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~---~v~l~~r~~~---~~~~~~~~~~--------~~----~~~~~~~~~D~   78 (270)
                      -++||+|+||||+|++|+-+.+.|++.--   +++++-|...   ..+++..+.+        +.    -.++..+..|+
T Consensus         9 f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi   88 (467)
T KOG1221|consen    9 FYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDI   88 (467)
T ss_pred             HhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccc
Confidence            57899999999999999999999998742   5777766432   1222222221        11    25688889999


Q ss_pred             CCHHHHHHHHHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCc
Q 024230           79 SSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSA  158 (270)
Q Consensus        79 ~~~~~~~~~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~  158 (270)
                      ++++---+--+.- ... ..+|++||+|+....       .|-++..+.+|++|+..+++-+.....   ...++.+|+.
T Consensus        89 ~~~~LGis~~D~~-~l~-~eV~ivih~AAtvrF-------de~l~~al~iNt~Gt~~~l~lak~~~~---l~~~vhVSTA  156 (467)
T KOG1221|consen   89 SEPDLGISESDLR-TLA-DEVNIVIHSAATVRF-------DEPLDVALGINTRGTRNVLQLAKEMVK---LKALVHVSTA  156 (467)
T ss_pred             cCcccCCChHHHH-HHH-hcCCEEEEeeeeecc-------chhhhhhhhhhhHhHHHHHHHHHHhhh---hheEEEeehh
Confidence            8644211100000 111 579999999987532       234667789999999999988854332   2467778776


Q ss_pred             ccccc----------CC------------------------------CChhhhhhHHHHHHHHHHHHHHHccCCceEEEE
Q 024230          159 LGIVS----------AN------------------------------VGTVYSATKGAMNQLAKNLACEWAKDNIRTNSV  198 (270)
Q Consensus       159 ~~~~~----------~~------------------------------~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v  198 (270)
                      -....          .+                              ....|.-+|+..+++...-     ..++.+..+
T Consensus       157 y~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~-----~~~lPivIi  231 (467)
T KOG1221|consen  157 YSNCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKE-----AENLPLVII  231 (467)
T ss_pred             heecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhh-----ccCCCeEEE
Confidence            54310          00                              0124666777777666554     346888888


Q ss_pred             ecCcccCCCCccc
Q 024230          199 APWYIRTPFTEPL  211 (270)
Q Consensus       199 ~pG~v~t~~~~~~  211 (270)
                      .|+.|.+....++
T Consensus       232 RPsiI~st~~EP~  244 (467)
T KOG1221|consen  232 RPSIITSTYKEPF  244 (467)
T ss_pred             cCCceeccccCCC
Confidence            8887777655443

>PLN00106 malate dehydrogenase

Probab=98.41  E-value=3.3e-06  Score=73.69  Aligned_cols=151  Identities=13%  Similarity=0.091  Sum_probs=98.3

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC--eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      ..++|+|||++|.+|..++..|+..+.  ++++++.++..  ....++.......  ...++++.+++.+.+        
T Consensus        17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~--g~a~Dl~~~~~~~--~i~~~~~~~d~~~~l--------   84 (323)
T PLN00106         17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTP--GVAADVSHINTPA--QVRGFLGDDQLGDAL--------   84 (323)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCC--eeEchhhhCCcCc--eEEEEeCCCCHHHHc--------
Confidence            346999999999999999999998775  79999998722  1122333222211  222433333333344        


Q ss_pred             CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccc-------------cc
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGI-------------VS  163 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~-------------~~  163 (270)
                      ...|++|+.||.... +     .+.+.+.+..|+.....+.+.+    .+.....+++++|....             .+
T Consensus        85 ~~aDiVVitAG~~~~-~-----g~~R~dll~~N~~i~~~i~~~i----~~~~p~aivivvSNPvD~~~~i~t~~~~~~s~  154 (323)
T PLN00106         85 KGADLVIIPAGVPRK-P-----GMTRDDLFNINAGIVKTLCEAV----AKHCPNALVNIISNPVNSTVPIAAEVLKKAGV  154 (323)
T ss_pred             CCCCEEEEeCCCCCC-C-----CCCHHHHHHHHHHHHHHHHHHH----HHHCCCeEEEEeCCCccccHHHHHHHHHHcCC
Confidence            679999999998533 1     1235677888888877776666    55555567776666553             12


Q ss_pred             CCCChhhhhhHHHHHHHHHHHHHHHccC
Q 024230          164 ANVGTVYSATKGAMNQLAKNLACEWAKD  191 (270)
Q Consensus       164 ~~~~~~y~~sKaal~~~~~sla~el~~~  191 (270)
                      .|..-.||.++.-..-|-..+|.++.-.
T Consensus       155 ~p~~~viG~~~LDs~Rl~~~lA~~lgv~  182 (323)
T PLN00106        155 YDPKKLFGVTTLDVVRANTFVAEKKGLD  182 (323)
T ss_pred             CCcceEEEEecchHHHHHHHHHHHhCCC
Confidence            2334568888766667888888887643

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.39  E-value=4.7e-05  Score=59.98  Aligned_cols=185  Identities=14%  Similarity=0.075  Sum_probs=115.7

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      ++|.|.|++|..|..++++..++|++|..+.|++.+....        ..+.+++.|+.|++++.+.+        ...|
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~--------~~~~i~q~Difd~~~~a~~l--------~g~D   64 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR--------QGVTILQKDIFDLTSLASDL--------AGHD   64 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc--------ccceeecccccChhhhHhhh--------cCCc
Confidence            4789999999999999999999999999999999886542        23567889999988875555        5789


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCC--------C-hh-h
Q 024230          101 IFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANV--------G-TV-Y  170 (270)
Q Consensus       101 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~--------~-~~-y  170 (270)
                      .+|..-+.....     ..+.       ....    .+++...++..+..++++++..+++.-.++        + .. |
T Consensus        65 aVIsA~~~~~~~-----~~~~-------~~k~----~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~  128 (211)
T COG2910          65 AVISAFGAGASD-----NDEL-------HSKS----IEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYK  128 (211)
T ss_pred             eEEEeccCCCCC-----hhHH-------HHHH----HHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHH
Confidence            999887765321     1111       1111    444455556656778999888877644332        2 12 4


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCcc--ccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHh
Q 024230          171 SATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEP--LLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLC  244 (270)
Q Consensus       171 ~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  244 (270)
                      ..+++.- -+..+|..+   .++.-+-++|...-.|-.+.  +.-.++   .+....--....+.+|-|-+++.-.
T Consensus       129 ~~A~~~a-e~L~~Lr~~---~~l~WTfvSPaa~f~PGerTg~yrlggD---~ll~n~~G~SrIS~aDYAiA~lDe~  197 (211)
T COG2910         129 PEALAQA-EFLDSLRAE---KSLDWTFVSPAAFFEPGERTGNYRLGGD---QLLVNAKGESRISYADYAIAVLDEL  197 (211)
T ss_pred             HHHHHHH-HHHHHHhhc---cCcceEEeCcHHhcCCccccCceEeccc---eEEEcCCCceeeeHHHHHHHHHHHH
Confidence            4444333 334455544   34888888887655552211  111111   1111111124557888888876665

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.38  E-value=3.3e-06  Score=64.43  Aligned_cols=79  Identities=22%  Similarity=0.336  Sum_probs=60.5

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCe-EEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGAT-VHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~-v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .++++|+++|.|+ ||.|++++..|++.|++ |.+++|+.++.+++.+++.  +..+.++..  .+   +....      
T Consensus         8 ~~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~--~~~~~~~~~--~~---~~~~~------   73 (135)
T PF01488_consen    8 GDLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFG--GVNIEAIPL--ED---LEEAL------   73 (135)
T ss_dssp             STGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHT--GCSEEEEEG--GG---HCHHH------
T ss_pred             CCcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcC--ccccceeeH--HH---HHHHH------
Confidence            4899999999998 89999999999999987 9999999999999888872  223444333  22   22222      


Q ss_pred             cCCcccEEEECCCCCC
Q 024230           95 FNGKLNIFVNNVGTSV  110 (270)
Q Consensus        95 ~~~~id~li~~ag~~~  110 (270)
                        .+.|++|++.+...
T Consensus        74 --~~~DivI~aT~~~~   87 (135)
T PF01488_consen   74 --QEADIVINATPSGM   87 (135)
T ss_dssp             --HTESEEEE-SSTTS
T ss_pred             --hhCCeEEEecCCCC
Confidence              46899999988753

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK09620 hypothetical protein; Provisional

Probab=98.32  E-value=9.6e-07  Score=73.40  Aligned_cols=86  Identities=19%  Similarity=0.169  Sum_probs=53.7

Q ss_pred             CCCCEEEEecCC----------------CcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCH
Q 024230           18 LQGMTALVTGGT----------------KGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR   81 (270)
Q Consensus        18 l~gk~vlItG~s----------------~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   81 (270)
                      |+||+||||+|.                |.+|.++|++|+++|++|++++........   ... .+..+..+..    .
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~---~~~-~~~~~~~V~s----~   72 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN---DIN-NQLELHPFEG----I   72 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc---ccC-CceeEEEEec----H
Confidence            589999999886                999999999999999999988764221100   000 0122222322    2


Q ss_pred             HHHHHHHHHHHHHcCCcccEEEECCCCCCCCC
Q 024230           82 PQRQTLINTVSSLFNGKLNIFVNNVGTSVLKP  113 (270)
Q Consensus        82 ~~~~~~~~~i~~~~~~~id~li~~ag~~~~~~  113 (270)
                      .++.+.+.++...  .++|++||+|++....+
T Consensus        73 ~d~~~~l~~~~~~--~~~D~VIH~AAvsD~~~  102 (229)
T PRK09620         73 IDLQDKMKSIITH--EKVDAVIMAAAGSDWVV  102 (229)
T ss_pred             HHHHHHHHHHhcc--cCCCEEEECccccceec
Confidence            2333333333221  36899999999865443

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.30  E-value=4.5e-06  Score=76.58  Aligned_cols=80  Identities=25%  Similarity=0.358  Sum_probs=60.7

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh-hHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTE-TELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      |++++|+|+|+|+++ +|.++|+.|+++|++|++++++. +..++..+++...+  +.++..|..+.            .
T Consensus         1 ~~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~------------~   65 (450)
T PRK14106          1 MELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELG--IELVLGEYPEE------------F   65 (450)
T ss_pred             CCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC--CEEEeCCcchh------------H
Confidence            368899999999888 99999999999999999999985 34444455555444  34566777651            1


Q ss_pred             cCCcccEEEECCCCCCC
Q 024230           95 FNGKLNIFVNNVGTSVL  111 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~  111 (270)
                      . +.+|++|+++|....
T Consensus        66 ~-~~~d~vv~~~g~~~~   81 (450)
T PRK14106         66 L-EGVDLVVVSPGVPLD   81 (450)
T ss_pred             h-hcCCEEEECCCCCCC
Confidence            1 578999999997543

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.26  E-value=4.7e-06  Score=73.87  Aligned_cols=77  Identities=22%  Similarity=0.304  Sum_probs=66.6

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCC-CeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLG-ATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G-~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      ++|||.|+ |+||+.+|..|+++| .+|.+.+|+.+++.++.+...   .++.+.++|+.|.+.+.++++        ..
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~---~~v~~~~vD~~d~~al~~li~--------~~   69 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIG---GKVEALQVDAADVDALVALIK--------DF   69 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhcc---ccceeEEecccChHHHHHHHh--------cC
Confidence            67899999 999999999999999 799999999999888766543   378999999999998888884        34


Q ss_pred             cEEEECCCCC
Q 024230          100 NIFVNNVGTS  109 (270)
Q Consensus       100 d~li~~ag~~  109 (270)
                      |++||++...
T Consensus        70 d~VIn~~p~~   79 (389)
T COG1748          70 DLVINAAPPF   79 (389)
T ss_pred             CEEEEeCCch
Confidence            9999999864

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=98.26  E-value=3.1e-05  Score=62.98  Aligned_cols=200  Identities=17%  Similarity=0.150  Sum_probs=116.1

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCC---eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGA---TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~---~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      |+|+|||++|=+|.+|.+.+.+.|.   +.++.+..                     .+|+++..+.+++++.      .
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk---------------------d~DLt~~a~t~~lF~~------e   54 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK---------------------DADLTNLADTRALFES------E   54 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc---------------------cccccchHHHHHHHhc------c
Confidence            7899999999999999999999986   34444321                     3799999999999876      4


Q ss_pred             cccEEEECCCCCC-CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccc-----c---------
Q 024230           98 KLNIFVNNVGTSV-LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGI-----V---------  162 (270)
Q Consensus        98 ~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~-----~---------  162 (270)
                      ++-.+||.|+... .-.-...+.+=|+..+++|    =++++.+-    +.+.-+++++.|.+-+     .         
T Consensus        55 kPthVIhlAAmVGGlf~N~~ynldF~r~Nl~in----dNVlhsa~----e~gv~K~vsclStCIfPdkt~yPIdEtmvh~  126 (315)
T KOG1431|consen   55 KPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQIN----DNVLHSAH----EHGVKKVVSCLSTCIFPDKTSYPIDETMVHN  126 (315)
T ss_pred             CCceeeehHhhhcchhhcCCCchHHHhhcceec----hhHHHHHH----HhchhhhhhhcceeecCCCCCCCCCHHHhcc
Confidence            6667777765321 1111123343344333333    33444442    2233356665555432     1         


Q ss_pred             --cCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC-Ch----hhHHH--------------H
Q 024230          163 --SANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG-NG----KFVDE--------------V  221 (270)
Q Consensus       163 --~~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~-~~----~~~~~--------------~  221 (270)
                        +.|....|+-+|..+.-..+.++.+++   -...++.|-.+..|-- .+.. .+    ...-.              .
T Consensus       127 gpphpsN~gYsyAKr~idv~n~aY~~qhg---~~~tsviPtNvfGphD-Nfnpe~sHVlPali~r~h~ak~~gtd~~~Vw  202 (315)
T KOG1431|consen  127 GPPHPSNFGYSYAKRMIDVQNQAYRQQHG---RDYTSVIPTNVFGPHD-NFNPENSHVLPALIHRFHEAKRNGTDELTVW  202 (315)
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHHHhC---CceeeeccccccCCCC-CCCcccccchHHHHHHHHHHHhcCCceEEEe
Confidence              123456799999988888888887764   3444454533333210 0100 00    01111              1


Q ss_pred             hhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCc
Q 024230          222 KSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGF  262 (270)
Q Consensus       222 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~  262 (270)
                      ....|++.+....|+|++++|++..-   -.=+.|.+..|.
T Consensus       203 GsG~PlRqFiys~DLA~l~i~vlr~Y---~~vEpiils~ge  240 (315)
T KOG1431|consen  203 GSGSPLRQFIYSDDLADLFIWVLREY---EGVEPIILSVGE  240 (315)
T ss_pred             cCCChHHHHhhHhHHHHHHHHHHHhh---cCccceEeccCc
Confidence            12345666778899999999999543   233555555543

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.23  E-value=8.5e-06  Score=71.34  Aligned_cols=75  Identities=23%  Similarity=0.205  Sum_probs=56.3

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHC-C-CeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSML-G-ATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~-G-~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      .++++|+|+||||+|.||+.+|++|+++ | .++++++|+++.+..+..++..         .++.   ++.       +
T Consensus       151 ~~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~---------~~i~---~l~-------~  211 (340)
T PRK14982        151 IDLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG---------GKIL---SLE-------E  211 (340)
T ss_pred             cCcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc---------ccHH---hHH-------H
Confidence            4799999999999999999999999865 5 5899999998887776554421         1221   222       2


Q ss_pred             HcCCcccEEEECCCCCC
Q 024230           94 LFNGKLNIFVNNVGTSV  110 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~  110 (270)
                      .+ ...|++|++++...
T Consensus       212 ~l-~~aDiVv~~ts~~~  227 (340)
T PRK14982        212 AL-PEADIVVWVASMPK  227 (340)
T ss_pred             HH-ccCCEEEECCcCCc
Confidence            23 57899999998753

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.20  E-value=9.1e-06  Score=73.08  Aligned_cols=76  Identities=22%  Similarity=0.302  Sum_probs=60.7

Q ss_pred             EEEecCCCcHHHHHHHHHHHCCC--eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           23 ALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        23 vlItG~s~giG~~la~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      |+|.|+ |.+|+.+++.|++++-  +|++.+|+.+++++..+++  .+.++.+..+|+.|.+++.+++        ...|
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~l~~~~--------~~~d   69 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL--LGDRVEAVQVDVNDPESLAELL--------RGCD   69 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT----TTTTEEEEE--TTTHHHHHHHH--------TTSS
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc--cccceeEEEEecCCHHHHHHHH--------hcCC
Confidence            789999 9999999999999984  7999999999988877655  4568999999999999988888        5669


Q ss_pred             EEEECCCCC
Q 024230          101 IFVNNVGTS  109 (270)
Q Consensus       101 ~li~~ag~~  109 (270)
                      ++|||++..
T Consensus        70 vVin~~gp~   78 (386)
T PF03435_consen   70 VVINCAGPF   78 (386)
T ss_dssp             EEEE-SSGG
T ss_pred             EEEECCccc
Confidence            999999864

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PTZ00325 malate dehydrogenase; Provisional

Probab=98.19  E-value=1.4e-05  Score=69.72  Aligned_cols=122  Identities=14%  Similarity=0.088  Sum_probs=79.4

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCC--CeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLG--ATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G--~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .++.++|+|||++|.+|..++..|+.++  .+++|+++....  ....++......  ....+.+++.++.+.+      
T Consensus         5 ~~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~--g~a~Dl~~~~~~--~~v~~~td~~~~~~~l------   74 (321)
T PTZ00325          5 ALKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAP--GVAADLSHIDTP--AKVTGYADGELWEKAL------   74 (321)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCc--ccccchhhcCcC--ceEEEecCCCchHHHh------
Confidence            3456699999999999999999999766  579999993322  212233322222  2234555544433333      


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccc
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALG  160 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~  160 (270)
                        ...|++|+++|.... +     .+.+.+.+..|+...-.+.+++    ++.+..++|+++|...
T Consensus        75 --~gaDvVVitaG~~~~-~-----~~tR~dll~~N~~i~~~i~~~i----~~~~~~~iviv~SNPv  128 (321)
T PTZ00325         75 --RGADLVLICAGVPRK-P-----GMTRDDLFNTNAPIVRDLVAAV----ASSAPKAIVGIVSNPV  128 (321)
T ss_pred             --CCCCEEEECCCCCCC-C-----CCCHHHHHHHHHHHHHHHHHHH----HHHCCCeEEEEecCcH
Confidence              578999999997432 1     1235667888888777776555    6666567888777653

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.08  E-value=1.4e-05  Score=68.97  Aligned_cols=80  Identities=20%  Similarity=0.276  Sum_probs=69.7

Q ss_pred             EEEEecCCCcHHHHHHHHHHH----CCCeEEEeeCChhHHHHHHHHHHhcC----CeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           22 TALVTGGTKGLGLAVVEELSM----LGATVHTCSRTETELNECIHHLQMKG----LKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~----~G~~v~l~~r~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      -++|-||||..|.-+.+++..    +|..+.+.+|+++++++.++.+.+..    ....++.||.+|++++.+++.    
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak----   82 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAK----   82 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHh----
Confidence            479999999999999999999    78899999999999999999888764    234489999999999999884    


Q ss_pred             HcCCcccEEEECCCCC
Q 024230           94 LFNGKLNIFVNNVGTS  109 (270)
Q Consensus        94 ~~~~~id~li~~ag~~  109 (270)
                          +..+++||+|-.
T Consensus        83 ----~~~vivN~vGPy   94 (423)
T KOG2733|consen   83 ----QARVIVNCVGPY   94 (423)
T ss_pred             ----hhEEEEeccccc
Confidence                457999999953

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.97  E-value=2e-05  Score=72.24  Aligned_cols=83  Identities=27%  Similarity=0.317  Sum_probs=57.6

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      |+++||+++|||+++ +|.++|+.|+++|++|++.+++........+.+...+.++.  ...  +..+   ..       
T Consensus         1 ~~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~--~~~--~~~~---~~-------   65 (447)
T PRK02472          1 TEYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVI--CGS--HPLE---LL-------   65 (447)
T ss_pred             CCcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEE--eCC--CCHH---Hh-------
Confidence            567899999999986 99999999999999999999876544444455555453332  111  1111   11       


Q ss_pred             CCcccEEEECCCCCCCCC
Q 024230           96 NGKLNIFVNNVGTSVLKP  113 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~  113 (270)
                      ...+|++|+++|+....+
T Consensus        66 ~~~~d~vV~s~gi~~~~~   83 (447)
T PRK02472         66 DEDFDLMVKNPGIPYTNP   83 (447)
T ss_pred             cCcCCEEEECCCCCCCCH
Confidence            024899999999875543

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.91  E-value=8.6e-05  Score=57.74  Aligned_cols=79  Identities=20%  Similarity=0.278  Sum_probs=58.2

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCC-CeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLG-ATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G-~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      +.++++++++|+|+ |++|.++++.|++.| .+|.+++|+++..+++.+++....     +..+..+.++   +      
T Consensus        14 ~~~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~---~------   78 (155)
T cd01065          14 GIELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-----IAIAYLDLEE---L------   78 (155)
T ss_pred             CCCCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-----cceeecchhh---c------
Confidence            45678999999998 899999999999996 789999999888877766654321     1223333322   1      


Q ss_pred             HcCCcccEEEECCCCCC
Q 024230           94 LFNGKLNIFVNNVGTSV  110 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~  110 (270)
                       . .+.|++|++.....
T Consensus        79 -~-~~~Dvvi~~~~~~~   93 (155)
T cd01065          79 -L-AEADLIINTTPVGM   93 (155)
T ss_pred             -c-ccCCEEEeCcCCCC
Confidence             2 57899999987654

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.89  E-value=4.8e-05  Score=66.70  Aligned_cols=116  Identities=9%  Similarity=0.081  Sum_probs=66.6

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCC-------CeEEEeeCChhH--HHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLG-------ATVHTCSRTETE--LNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTV   91 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G-------~~v~l~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i   91 (270)
                      -+|+|||++|.+|.+++..|+..+       .+|+++++++..  ++....++..   .......|+....++.+.+   
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d---~~~~~~~~~~~~~~~~~~l---   76 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQD---CAFPLLKSVVATTDPEEAF---   76 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhh---ccccccCCceecCCHHHHh---
Confidence            469999999999999999999854       589999996532  2211111110   0001111332222222222   


Q ss_pred             HHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-C-CcEEEEecC
Q 024230           92 SSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRAS-G-AASIVLMSS  157 (270)
Q Consensus        92 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~-~g~ii~iss  157 (270)
                           ...|++||+||.....   ..+.   .+.++.|+.=.-.+    .+.+.+. . .+.+|++|.
T Consensus        77 -----~~aDiVI~tAG~~~~~---~~~R---~~l~~~N~~i~~~i----~~~i~~~~~~~~iiivvsN  129 (325)
T cd01336          77 -----KDVDVAILVGAMPRKE---GMER---KDLLKANVKIFKEQ----GEALDKYAKKNVKVLVVGN  129 (325)
T ss_pred             -----CCCCEEEEeCCcCCCC---CCCH---HHHHHHHHHHHHHH----HHHHHHhCCCCeEEEEecC
Confidence                 5799999999985331   2233   44566776544444    4444555 2 456666664

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=97.88  E-value=6.2e-05  Score=62.03  Aligned_cols=212  Identities=18%  Similarity=0.143  Sum_probs=123.8

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHH-HHHHHHh-----cCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNE-CIHHLQM-----KGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~-~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      |++||||-+|-=|.-+|+.|+.+|++|+.+-|+.....- ..+.+-.     .++.....-.|++|...+.++++.+   
T Consensus        29 kvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i---  105 (376)
T KOG1372|consen   29 KVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI---  105 (376)
T ss_pred             eEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc---
Confidence            589999999999999999999999999998876654321 2333332     2566777779999999988888775   


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccccc----------C
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVS----------A  164 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~----------~  164 (270)
                         +++=+.|.|+..+.+--.+++    +.+-++...|++.++.+....-...+ -++---|++ -..+          .
T Consensus       106 ---kPtEiYnLaAQSHVkvSFdlp----eYTAeVdavGtLRlLdAi~~c~l~~~-VrfYQAstS-ElyGkv~e~PQsE~T  176 (376)
T KOG1372|consen  106 ---KPTEVYNLAAQSHVKVSFDLP----EYTAEVDAVGTLRLLDAIRACRLTEK-VRFYQASTS-ELYGKVQEIPQSETT  176 (376)
T ss_pred             ---CchhhhhhhhhcceEEEeecc----cceeeccchhhhhHHHHHHhcCcccc-eeEEecccH-hhcccccCCCcccCC
Confidence               677788888886654222222    34456888999999888744322221 223223322 2221          1


Q ss_pred             CC--ChhhhhhHHHHHHHHHHHHHHH---ccCCceEEEEecCcccCCCCccccCChhhHHHHh----------hcCCCCC
Q 024230          165 NV--GTVYSATKGAMNQLAKNLACEW---AKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVK----------SRTPMGR  229 (270)
Q Consensus       165 ~~--~~~y~~sKaal~~~~~sla~el---~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~----------~~~~~~~  229 (270)
                      |+  .+.|+++|.+--=++-.+...+   +=.||-.|.=+|.-=.+-.++.+.+   ....+.          .....+.
T Consensus       177 PFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItR---svakI~~gqqe~~~LGNL~a~RD  253 (376)
T KOG1372|consen  177 PFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITR---SVAKISLGQQEKIELGNLSALRD  253 (376)
T ss_pred             CCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccccchhhHHHHH---HHHHhhhcceeeEEecchhhhcc
Confidence            22  3579999875332222222222   2335666655553222222222211   111110          1112344


Q ss_pred             CCChHhHHHHHHHHhCCC
Q 024230          230 LGEPKEVSSLVAFLCMPA  247 (270)
Q Consensus       230 ~~~~~dva~~~~~l~s~~  247 (270)
                      ++-+.|-.++++..+..+
T Consensus       254 WGhA~dYVEAMW~mLQ~d  271 (376)
T KOG1372|consen  254 WGHAGDYVEAMWLMLQQD  271 (376)
T ss_pred             cchhHHHHHHHHHHHhcC
Confidence            566778888877666543

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.87  E-value=6.7e-05  Score=64.41  Aligned_cols=79  Identities=24%  Similarity=0.344  Sum_probs=57.7

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCC-CeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLG-ATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G-~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      ..++++|+++|+|+ ||+|++++..|+..| .+|.+++|+.++.+++.+.+.... .+.   .++    +..       .
T Consensus       118 ~~~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~-~~~---~~~----~~~-------~  181 (278)
T PRK00258        118 GVDLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALG-KAE---LDL----ELQ-------E  181 (278)
T ss_pred             CCCCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc-cee---ecc----cch-------h
Confidence            35789999999997 899999999999999 689999999998888777664321 111   111    111       1


Q ss_pred             HcCCcccEEEECCCCCC
Q 024230           94 LFNGKLNIFVNNVGTSV  110 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~  110 (270)
                      .. ...|++||+.....
T Consensus       182 ~~-~~~DivInaTp~g~  197 (278)
T PRK00258        182 EL-ADFDLIINATSAGM  197 (278)
T ss_pred             cc-ccCCEEEECCcCCC
Confidence            11 57899999987643

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.85  E-value=0.0002  Score=61.28  Aligned_cols=78  Identities=19%  Similarity=0.230  Sum_probs=58.0

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      ...++|+++|+|+ ||+|++++..|++.|++|.+++|++++.+++.+.+...+. ......+     +   .      ..
T Consensus       113 ~~~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~-~~~~~~~-----~---~------~~  176 (270)
T TIGR00507       113 PLRPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGE-IQAFSMD-----E---L------PL  176 (270)
T ss_pred             CCccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCc-eEEechh-----h---h------cc
Confidence            4467899999999 6999999999999999999999999888888777654332 2221111     1   0      11


Q ss_pred             CCcccEEEECCCCCC
Q 024230           96 NGKLNIFVNNVGTSV  110 (270)
Q Consensus        96 ~~~id~li~~ag~~~  110 (270)
                       ...|++||+.+...
T Consensus       177 -~~~DivInatp~gm  190 (270)
T TIGR00507       177 -HRVDLIINATSAGM  190 (270)
T ss_pred             -cCccEEEECCCCCC
Confidence             46899999998753

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.85  E-value=0.00047  Score=59.57  Aligned_cols=80  Identities=18%  Similarity=0.281  Sum_probs=55.3

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      +|++++|+|+++++|.++++.+...|.+|++++++++..+.+ .   ..+...   .+|..+.+..+.+.+..   ....
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~---~~g~~~---~~~~~~~~~~~~~~~~~---~~~~  213 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELV-R---QAGADA---VFNYRAEDLADRILAAT---AGQG  213 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-H---HcCCCE---EEeCCCcCHHHHHHHHc---CCCc
Confidence            689999999999999999999999999999999987765443 2   223221   13444443333332221   1146


Q ss_pred             ccEEEECCCC
Q 024230           99 LNIFVNNVGT  108 (270)
Q Consensus        99 id~li~~ag~  108 (270)
                      +|.++++++.
T Consensus       214 ~d~vi~~~~~  223 (325)
T cd08253         214 VDVIIEVLAN  223 (325)
T ss_pred             eEEEEECCch
Confidence            9999999873

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=97.82  E-value=0.0002  Score=56.20  Aligned_cols=156  Identities=21%  Similarity=0.155  Sum_probs=104.8

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCC--eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      -+.++++.++|.|++|-.|..+.+++++.+-  +|+++.|++....+       .+..+.....|....++....+    
T Consensus        13 Df~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~a-------t~k~v~q~~vDf~Kl~~~a~~~----   81 (238)
T KOG4039|consen   13 DFRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPA-------TDKVVAQVEVDFSKLSQLATNE----   81 (238)
T ss_pred             HHhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCcc-------ccceeeeEEechHHHHHHHhhh----
Confidence            3778899999999999999999999999984  69999998643222       1235666677887665544333    


Q ss_pred             HHcCCcccEEEECCCCCCCC----CCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCCh
Q 024230           93 SLFNGKLNIFVNNVGTSVLK----PTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGT  168 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~  168 (270)
                          ..+|++++|-|...-.    .+...+.+-           .+.+.+.+    ++++..+|+.+||..+...+.  .
T Consensus        82 ----qg~dV~FcaLgTTRgkaGadgfykvDhDy-----------vl~~A~~A----Ke~Gck~fvLvSS~GAd~sSr--F  140 (238)
T KOG4039|consen   82 ----QGPDVLFCALGTTRGKAGADGFYKVDHDY-----------VLQLAQAA----KEKGCKTFVLVSSAGADPSSR--F  140 (238)
T ss_pred             ----cCCceEEEeecccccccccCceEeechHH-----------HHHHHHHH----HhCCCeEEEEEeccCCCcccc--e
Confidence                5799999998874321    222233221           12333333    555667899999998876654  4


Q ss_pred             hhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCC
Q 024230          169 VYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFT  208 (270)
Q Consensus       169 ~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~  208 (270)
                      .|--.|.=++.=+..|.      ==++..+.||++..+.+
T Consensus       141 lY~k~KGEvE~~v~eL~------F~~~~i~RPG~ll~~R~  174 (238)
T KOG4039|consen  141 LYMKMKGEVERDVIELD------FKHIIILRPGPLLGERT  174 (238)
T ss_pred             eeeeccchhhhhhhhcc------ccEEEEecCcceecccc
Confidence            57677766665443332      13667789999876654

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=97.76  E-value=0.00048  Score=74.50  Aligned_cols=179  Identities=17%  Similarity=0.149  Sum_probs=113.6

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      .+.++.++|++.+++++.+++.+|.++|+.|+++...+. ...   ........+..+...-.+..++..+++.+.... 
T Consensus      1752 ~~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 1826 (2582)
T TIGR02813      1752 KQSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWV-VSH---SASPLASAIASVTLGTIDDTSIEAVIKDIEEKT- 1826 (2582)
T ss_pred             cccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeecccc-ccc---cccccccccccccccccchHHHHHHHHhhhccc-
Confidence            556889999999999999999999999999887742211 100   000011122233445556677888888776654 


Q ss_pred             CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhh------
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVY------  170 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y------  170 (270)
                      +.++.+||......... ...+...+.+.-...+...|.+.|.+.+.+...+++.++.++...|..+.......      
T Consensus      1827 ~~~~g~i~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~f~~ak~~~~~l~~~~~~~~~~vsr~~G~~g~~~~~~~~~~~~~ 1905 (2582)
T TIGR02813      1827 AQIDGFIHLQPQHKSVA-DKVDAIELPEAAKQSLMLAFLFAKLLNVKLATNARASFVTVSRIDGGFGYSNGDADSGTQQV 1905 (2582)
T ss_pred             cccceEEEecccccccc-ccccccccchhhHHHHHHHHHHHHhhchhhccCCCeEEEEEEecCCccccCCcccccccccc
Confidence            78999999877542100 00000011111224445567777777666555556789999988765554222211      


Q ss_pred             --hhhHHHHHHHHHHHHHHHccCCceEEEEecC
Q 024230          171 --SATKGAMNQLAKNLACEWAKDNIRTNSVAPW  201 (270)
Q Consensus       171 --~~sKaal~~~~~sla~el~~~~i~v~~v~pG  201 (270)
                        ....+++.+|+|+++.|+....+|...+.|.
T Consensus      1906 ~~~~~~a~l~Gl~Ktl~~E~P~~~~r~vDl~~~ 1938 (2582)
T TIGR02813      1906 KAELNQAALAGLTKTLNHEWNAVFCRALDLAPK 1938 (2582)
T ss_pred             ccchhhhhHHHHHHhHHHHCCCCeEEEEeCCCC
Confidence              2357899999999999998777777777664

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.75  E-value=0.00013  Score=58.57  Aligned_cols=81  Identities=25%  Similarity=0.318  Sum_probs=50.3

Q ss_pred             CCCCEEEEecCC----------------CcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCH
Q 024230           18 LQGMTALVTGGT----------------KGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR   81 (270)
Q Consensus        18 l~gk~vlItG~s----------------~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   81 (270)
                      |+||+||||+|.                |..|.++|+.++.+|++|+++..... ...        ...+..  .++.+.
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~--------p~~~~~--i~v~sa   69 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP--------PPGVKV--IRVESA   69 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS-------------TTEEE--EE-SSH
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc--------cccceE--EEecch
Confidence            689999999986                88999999999999999999877632 110        112333  345555


Q ss_pred             HHHHHHHHHHHHHcCCcccEEEECCCCCCCCC
Q 024230           82 PQRQTLINTVSSLFNGKLNIFVNNVGTSVLKP  113 (270)
Q Consensus        82 ~~~~~~~~~i~~~~~~~id~li~~ag~~~~~~  113 (270)
                      +++.+.+.   +.+ ..-|++|++|++....+
T Consensus        70 ~em~~~~~---~~~-~~~Di~I~aAAVsDf~p   97 (185)
T PF04127_consen   70 EEMLEAVK---ELL-PSADIIIMAAAVSDFRP   97 (185)
T ss_dssp             HHHHHHHH---HHG-GGGSEEEE-SB--SEEE
T ss_pred             hhhhhhhc---ccc-CcceeEEEecchhheee
Confidence            56555554   444 45699999999865443

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.75  E-value=0.00074  Score=58.19  Aligned_cols=44  Identities=25%  Similarity=0.482  Sum_probs=39.1

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNE   59 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~   59 (270)
                      ..+++||+++|+|. |++|+.+|+.|...|++|.+++|+++..+.
T Consensus       146 ~~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~  189 (287)
T TIGR02853       146 DFTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLAR  189 (287)
T ss_pred             CCCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            45899999999999 669999999999999999999999876544

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=97.74  E-value=0.00013  Score=59.67  Aligned_cols=218  Identities=14%  Similarity=0.149  Sum_probs=126.9

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHC-CC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSML-GA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~-G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      ..+-+..+|||||+-|-+|..+|+.|..+ |- .|++.+-..+...     .-+.|   -++-.|+.|..++++++-.  
T Consensus        39 s~~~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~-----V~~~G---PyIy~DILD~K~L~eIVVn--  108 (366)
T KOG2774|consen   39 SQTQKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPAN-----VTDVG---PYIYLDILDQKSLEEIVVN--  108 (366)
T ss_pred             cccCCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchh-----hcccC---CchhhhhhccccHHHhhcc--
Confidence            34556679999999999999999998876 65 4666555443321     11112   2456788888777777632  


Q ss_pred             HHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCc-cccccCC------
Q 024230           93 SLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSA-LGIVSAN------  165 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~-~~~~~~~------  165 (270)
                          .++|.+||--+..+.     ..+...--..++|+.|..++++.+.    +.+  --+|+-|. ++..+..      
T Consensus       109 ----~RIdWL~HfSALLSA-----vGE~NVpLA~~VNI~GvHNil~vAa----~~k--L~iFVPSTIGAFGPtSPRNPTP  173 (366)
T KOG2774|consen  109 ----KRIDWLVHFSALLSA-----VGETNVPLALQVNIRGVHNILQVAA----KHK--LKVFVPSTIGAFGPTSPRNPTP  173 (366)
T ss_pred             ----cccceeeeHHHHHHH-----hcccCCceeeeecchhhhHHHHHHH----HcC--eeEeecccccccCCCCCCCCCC
Confidence                689999997654211     1111222346799999999998883    333  34454444 4443321      


Q ss_pred             ------CChhhhhhHHHHHHHHHHHHHHHccCCceEEEE-ecCcccCCCCcc-ccCC--hhhHHHHhh---cCCC---C-
Q 024230          166 ------VGTVYSATKGAMNQLAKNLACEWAKDNIRTNSV-APWYIRTPFTEP-LLGN--GKFVDEVKS---RTPM---G-  228 (270)
Q Consensus       166 ------~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v-~pG~v~t~~~~~-~~~~--~~~~~~~~~---~~~~---~-  228 (270)
                            ....|+.||--.+.+-+.+...   +|+..-++ .||.+...-..+ ....  ..+.+....   ..++   . 
T Consensus       174 dltIQRPRTIYGVSKVHAEL~GEy~~hr---Fg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtr  250 (366)
T KOG2774|consen  174 DLTIQRPRTIYGVSKVHAELLGEYFNHR---FGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTR  250 (366)
T ss_pred             CeeeecCceeechhHHHHHHHHHHHHhh---cCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCcc
Confidence                  1347999998888877766544   45655554 366554421111 0000  111111111   1111   1 


Q ss_pred             -CCCChHhHHHHHHHHhCCCCCCccCcEEeecC
Q 024230          229 -RLGEPKEVSSLVAFLCMPAASYITGQTVCIDG  260 (270)
Q Consensus       229 -~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdg  260 (270)
                       .++.-+|.-.+++.++..+++.+.-.+++|.|
T Consensus       251 lpmmy~~dc~~~~~~~~~a~~~~lkrr~ynvt~  283 (366)
T KOG2774|consen  251 LPMMYDTDCMASVIQLLAADSQSLKRRTYNVTG  283 (366)
T ss_pred             CceeehHHHHHHHHHHHhCCHHHhhhheeeece
Confidence             23456777777777776666666666776653

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.72  E-value=0.00027  Score=66.05  Aligned_cols=49  Identities=27%  Similarity=0.245  Sum_probs=43.3

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHL   64 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~   64 (270)
                      ..++++|+++|+|+ ||+|++++..|+++|++|++++|+.++.+++.+++
T Consensus       374 ~~~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        374 GSPLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             ccCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            45788999999999 69999999999999999999999988877776654

>PRK06849 hypothetical protein; Provisional

Probab=97.62  E-value=0.00067  Score=61.09  Aligned_cols=83  Identities=11%  Similarity=0.086  Sum_probs=58.5

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      +.|+|||||++..+|.++++.|.+.|++|++++.++.......+.+.    ..+.+...-.+.+...+.+.++.++  .+
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~d----~~~~~p~p~~d~~~~~~~L~~i~~~--~~   76 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAVD----GFYTIPSPRWDPDAYIQALLSIVQR--EN   76 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhhh----heEEeCCCCCCHHHHHHHHHHHHHH--cC
Confidence            46899999999999999999999999999999998765543333332    2333322334555555555555555  36


Q ss_pred             ccEEEECCC
Q 024230           99 LNIFVNNVG  107 (270)
Q Consensus        99 id~li~~ag  107 (270)
                      +|++|-...
T Consensus        77 id~vIP~~e   85 (389)
T PRK06849         77 IDLLIPTCE   85 (389)
T ss_pred             CCEEEECCh
Confidence            899997765

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.55  E-value=0.0026  Score=55.39  Aligned_cols=80  Identities=25%  Similarity=0.371  Sum_probs=56.9

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      ..+++++|+|+++++|.++++.+...|++|++++++++..+.+    ...+..   ...|..+.+..+.+.+...   ++
T Consensus       165 ~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~~~~---~~~~~~~~~~~~~~~~~~~---~~  234 (342)
T cd08266         165 RPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA----KELGAD---YVIDYRKEDFVREVRELTG---KR  234 (342)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHcCCC---eEEecCChHHHHHHHHHhC---CC
Confidence            3678999999999999999999999999999999988765543    222322   1235555544444433221   14


Q ss_pred             cccEEEECCC
Q 024230           98 KLNIFVNNVG  107 (270)
Q Consensus        98 ~id~li~~ag  107 (270)
                      .+|++++++|
T Consensus       235 ~~d~~i~~~g  244 (342)
T cd08266         235 GVDVVVEHVG  244 (342)
T ss_pred             CCcEEEECCc
Confidence            6999999987

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.55  E-value=0.00016  Score=58.93  Aligned_cols=48  Identities=25%  Similarity=0.244  Sum_probs=42.3

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHH   63 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~   63 (270)
                      ..+++||+++|+|.+ .+|+.+|+.|.+.|++|++++++++..++..+.
T Consensus        23 ~~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~   70 (200)
T cd01075          23 TDSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAEL   70 (200)
T ss_pred             CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence            568999999999996 899999999999999999999998877665543

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.53  E-value=0.0012  Score=58.91  Aligned_cols=78  Identities=15%  Similarity=0.182  Sum_probs=56.6

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      .+.+++++|+|+ |.+|+.+++.+...|++|.+++|++++++.+...+   +..+   ..+..+.+++.+.+        
T Consensus       164 ~l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~---g~~v---~~~~~~~~~l~~~l--------  228 (370)
T TIGR00518       164 GVEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEF---GGRI---HTRYSNAYEIEDAV--------  228 (370)
T ss_pred             CCCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhc---Ccee---EeccCCHHHHHHHH--------
Confidence            467888999987 79999999999999999999999988765543322   2222   23445555544443        


Q ss_pred             CcccEEEECCCCC
Q 024230           97 GKLNIFVNNVGTS  109 (270)
Q Consensus        97 ~~id~li~~ag~~  109 (270)
                      ...|++|++++..
T Consensus       229 ~~aDvVI~a~~~~  241 (370)
T TIGR00518       229 KRADLLIGAVLIP  241 (370)
T ss_pred             ccCCEEEEccccC
Confidence            4679999998763

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.52  E-value=0.0052  Score=47.12  Aligned_cols=111  Identities=11%  Similarity=0.077  Sum_probs=71.6

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCC--eEEEeeCChhHHHHHHHHHHhc---C-CeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTETELNECIHHLQMK---G-LKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~---~-~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      +|.|+|++|.+|.++|..|...+.  ++++++++++.++....++...   . ....+..   .+.++           +
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~~-----------~   67 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDYEA-----------L   67 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSGGG-----------G
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---ccccc-----------c
Confidence            689999999999999999999985  6999999988777666666543   1 2222222   22111           2


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecC
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSS  157 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss  157 (270)
                       ...|++|..+|....   ...+.   .+.++.|..-.-.+.+.+    .+.. .+.+++++.
T Consensus        68 -~~aDivvitag~~~~---~g~sR---~~ll~~N~~i~~~~~~~i----~~~~p~~~vivvtN  119 (141)
T PF00056_consen   68 -KDADIVVITAGVPRK---PGMSR---LDLLEANAKIVKEIAKKI----AKYAPDAIVIVVTN  119 (141)
T ss_dssp             -TTESEEEETTSTSSS---TTSSH---HHHHHHHHHHHHHHHHHH----HHHSTTSEEEE-SS
T ss_pred             -ccccEEEEecccccc---ccccH---HHHHHHhHhHHHHHHHHH----HHhCCccEEEEeCC
Confidence             578999999998532   11233   344666666555554444    4443 456666543

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.52  E-value=0.00094  Score=57.50  Aligned_cols=79  Identities=14%  Similarity=0.090  Sum_probs=57.3

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .++++|+++|.|+ ||.|++++..|++.|. +|.+++|+.++.+++.+.+........+...     +++.+.       
T Consensus       123 ~~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~-----~~~~~~-------  189 (284)
T PRK12549        123 PDASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAG-----SDLAAA-------  189 (284)
T ss_pred             cCccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEec-----cchHhh-------
Confidence            4678899999998 6799999999999997 7999999999998888877554322222111     111111       


Q ss_pred             cCCcccEEEECCCC
Q 024230           95 FNGKLNIFVNNVGT  108 (270)
Q Consensus        95 ~~~~id~li~~ag~  108 (270)
                      . ...|++||+...
T Consensus       190 ~-~~aDiVInaTp~  202 (284)
T PRK12549        190 L-AAADGLVHATPT  202 (284)
T ss_pred             h-CCCCEEEECCcC
Confidence            1 468999999543

>PRK05086 malate dehydrogenase; Provisional

Probab=97.51  E-value=0.00075  Score=58.88  Aligned_cols=118  Identities=14%  Similarity=0.088  Sum_probs=67.1

Q ss_pred             CEEEEecCCCcHHHHHHHHHHH-C--CCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           21 MTALVTGGTKGLGLAVVEELSM-L--GATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~-~--G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      ++++|+|++|++|.+++..+.. .  +..++++++++. .+....++........ +..  .+.+++.+.+        .
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~~~~~~~~-i~~--~~~~d~~~~l--------~   68 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLSHIPTAVK-IKG--FSGEDPTPAL--------E   68 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-CcceehhhhcCCCCce-EEE--eCCCCHHHHc--------C
Confidence            5799999999999999998865 2  457899998754 2111112222111111 111  1111211122        4


Q ss_pred             cccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccc
Q 024230           98 KLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALG  160 (270)
Q Consensus        98 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~  160 (270)
                      ..|++|.++|.....   ..+.   .+.+..|......+.+.+    .+.+...+|.+.|...
T Consensus        69 ~~DiVIitaG~~~~~---~~~R---~dll~~N~~i~~~ii~~i----~~~~~~~ivivvsNP~  121 (312)
T PRK05086         69 GADVVLISAGVARKP---GMDR---SDLFNVNAGIVKNLVEKV----AKTCPKACIGIITNPV  121 (312)
T ss_pred             CCCEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHH----HHhCCCeEEEEccCch
Confidence            599999999985332   1222   345677776666665444    5555456666666544

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.50  E-value=0.0008  Score=57.88  Aligned_cols=79  Identities=22%  Similarity=0.303  Sum_probs=56.1

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      ++++|+++|.|+ ||.+++++..|++.|. +|.+++|+.++.+++.+.+.... .+.    .+...+++...       .
T Consensus       122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~-~~~----~~~~~~~~~~~-------~  188 (282)
T TIGR01809       122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVG-VIT----RLEGDSGGLAI-------E  188 (282)
T ss_pred             ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcC-cce----eccchhhhhhc-------c
Confidence            478999999976 8999999999999997 69999999998888777664321 111    11111122111       1


Q ss_pred             CCcccEEEECCCCC
Q 024230           96 NGKLNIFVNNVGTS  109 (270)
Q Consensus        96 ~~~id~li~~ag~~  109 (270)
                       ...|++||+....
T Consensus       189 -~~~DiVInaTp~g  201 (282)
T TIGR01809       189 -KAAEVLVSTVPAD  201 (282)
T ss_pred             -cCCCEEEECCCCC
Confidence             4689999998764

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.42  E-value=0.00092  Score=60.51  Aligned_cols=76  Identities=14%  Similarity=0.189  Sum_probs=56.0

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .+++||+++|.|+ |++|+.+++.|+.+|. ++.+++|+.++.+.+..++..  ..+       ...+++...+      
T Consensus       177 ~~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~--~~~-------~~~~~l~~~l------  240 (414)
T PRK13940        177 DNISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRN--ASA-------HYLSELPQLI------  240 (414)
T ss_pred             cCccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcC--CeE-------ecHHHHHHHh------
Confidence            3689999999999 9999999999999996 699999998887776665421  111       1112222222      


Q ss_pred             cCCcccEEEECCCCC
Q 024230           95 FNGKLNIFVNNVGTS  109 (270)
Q Consensus        95 ~~~~id~li~~ag~~  109 (270)
                        ...|++|+|.+..
T Consensus       241 --~~aDiVI~aT~a~  253 (414)
T PRK13940        241 --KKADIIIAAVNVL  253 (414)
T ss_pred             --ccCCEEEECcCCC
Confidence              5789999998864

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.36  E-value=0.0014  Score=60.62  Aligned_cols=92  Identities=23%  Similarity=0.252  Sum_probs=63.3

Q ss_pred             CCCCCCcccccccccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChh-HHHHHHHHHHhcCCeEEEEEccCC
Q 024230            1 MAQPQQTESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTET-ELNECIHHLQMKGLKVTGSVCDVS   79 (270)
Q Consensus         1 ~~~~~~~~~~~~~~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~   79 (270)
                      |++|+-...+    ..++++|+|+|.|+ |++|.++|+.|+++|++|.+++++++ ......+.+++.|..++  ..+-.
T Consensus         1 ~~~~~~~~~~----~~~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~--~~~~~   73 (480)
T PRK01438          1 MSRPPGLTSW----HSDWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVR--LGPGP   73 (480)
T ss_pred             CCcccchhhc----ccCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEE--ECCCc
Confidence            6777555544    34678999999997 77999999999999999999986654 33344555666554432  21111


Q ss_pred             CHHHHHHHHHHHHHHcCCcccEEEECCCCCCCCC
Q 024230           80 SRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKP  113 (270)
Q Consensus        80 ~~~~~~~~~~~i~~~~~~~id~li~~ag~~~~~~  113 (270)
                      .             .. ...|.+|...|+.+..+
T Consensus        74 ~-------------~~-~~~D~Vv~s~Gi~~~~~   93 (480)
T PRK01438         74 T-------------LP-EDTDLVVTSPGWRPDAP   93 (480)
T ss_pred             c-------------cc-CCCCEEEECCCcCCCCH
Confidence            1             01 46899999999866543

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.35  E-value=0.0022  Score=55.08  Aligned_cols=81  Identities=15%  Similarity=0.125  Sum_probs=56.7

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhc-CCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMK-GLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      .++++|+++|.|+ ||.+++++..|++.|. +|.+++|+.++.+++.+.+... +.... ...+   ..+.....     
T Consensus       123 ~~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~-~~~~---~~~~~~~~-----  192 (283)
T PRK14027        123 PNAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAV-VGVD---ARGIEDVI-----  192 (283)
T ss_pred             cCcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceE-EecC---HhHHHHHH-----
Confidence            3577899999998 8999999999999997 6999999999988887776432 22111 1122   11111111     


Q ss_pred             HcCCcccEEEECCCCC
Q 024230           94 LFNGKLNIFVNNVGTS  109 (270)
Q Consensus        94 ~~~~~id~li~~ag~~  109 (270)
                         ...|++||+....
T Consensus       193 ---~~~divINaTp~G  205 (283)
T PRK14027        193 ---AAADGVVNATPMG  205 (283)
T ss_pred             ---hhcCEEEEcCCCC
Confidence               3579999997654

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.35  E-value=0.0016  Score=57.08  Aligned_cols=113  Identities=11%  Similarity=0.098  Sum_probs=66.5

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCC-------eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHH--HHH--HH
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGA-------TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQ--TLI--NT   90 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~-------~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~--~~~--~~   90 (270)
                      +|.|+|++|.+|.+++..|+..|.       +++|++++++..            .......|+.|.....  ...  ..
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~------------~a~g~~~Dl~d~~~~~~~~~~~~~~   68 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK------------VLEGVVMELMDCAFPLLDGVVPTHD   68 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc------------ccceeEeehhcccchhcCceeccCC
Confidence            489999999999999999998664       599999865531            0111234444433100  000  01


Q ss_pred             HHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCcEEEEecC
Q 024230           91 VSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRAS--GAASIVLMSS  157 (270)
Q Consensus        91 i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~--~~g~ii~iss  157 (270)
                      ..+.+ ...|++|+.||....      ..++..+.+..|+.-.-.+    .+.+.+.  ..+.+|++|.
T Consensus        69 ~~~~~-~~aDiVVitAG~~~~------~~~tr~~ll~~N~~i~k~i----~~~i~~~~~~~~iiivvsN  126 (324)
T TIGR01758        69 PAVAF-TDVDVAILVGAFPRK------EGMERRDLLSKNVKIFKEQ----GRALDKLAKKDCKVLVVGN  126 (324)
T ss_pred             hHHHh-CCCCEEEEcCCCCCC------CCCcHHHHHHHHHHHHHHH----HHHHHhhCCCCeEEEEeCC
Confidence            11222 579999999998532      1123455667776554444    5555555  2455666553

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.32  E-value=0.0054  Score=53.63  Aligned_cols=116  Identities=12%  Similarity=0.055  Sum_probs=75.0

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCC--eEEEeeCChhHHHHHHHHHHhcC---CeEEEEEccCCCHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTETELNECIHHLQMKG---LKVTGSVCDVSSRPQRQTLINT   90 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~   90 (270)
                      ++-.+++|.|+|+ |.+|.++|..++..|.  ++++++++++.++....+++...   ..+... .  .+   .++ +  
T Consensus         2 ~~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~--~~---~~~-~--   71 (315)
T PRK00066          2 MKKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-A--GD---YSD-C--   71 (315)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-e--CC---HHH-h--
Confidence            5567889999998 9999999999999997  79999999888777766666432   122211 1  11   111 1  


Q ss_pred             HHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecC
Q 024230           91 VSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSS  157 (270)
Q Consensus        91 i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss  157 (270)
                            ..-|++|..+|.... +  ..+..   +.++.|..-...+    .+.+.+.. .+.+++++-
T Consensus        72 ------~~adivIitag~~~k-~--g~~R~---dll~~N~~i~~~i----~~~i~~~~~~~~vivvsN  123 (315)
T PRK00066         72 ------KDADLVVITAGAPQK-P--GETRL---DLVEKNLKIFKSI----VGEVMASGFDGIFLVASN  123 (315)
T ss_pred             ------CCCCEEEEecCCCCC-C--CCCHH---HHHHHHHHHHHHH----HHHHHHhCCCeEEEEccC
Confidence                  578999999998532 1  23333   3455665544444    44445443 456666653

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.31  E-value=0.0021  Score=56.49  Aligned_cols=78  Identities=26%  Similarity=0.427  Sum_probs=54.7

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC-c
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG-K   98 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~-~   98 (270)
                      |++|||+||+||+|..........|+.++++..++++.+ .++   +.|....   .|..+.+    +.+++++..++ .
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~---~lGAd~v---i~y~~~~----~~~~v~~~t~g~g  211 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLK---ELGADHV---INYREED----FVEQVRELTGGKG  211 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHH---hcCCCEE---EcCCccc----HHHHHHHHcCCCC
Confidence            899999999999999999999999987777776666555 333   3444332   2233322    55555554444 6


Q ss_pred             ccEEEECCCC
Q 024230           99 LNIFVNNVGT  108 (270)
Q Consensus        99 id~li~~ag~  108 (270)
                      +|+++...|.
T Consensus       212 vDvv~D~vG~  221 (326)
T COG0604         212 VDVVLDTVGG  221 (326)
T ss_pred             ceEEEECCCH
Confidence            9999999884

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.30  E-value=0.00094  Score=57.46  Aligned_cols=78  Identities=21%  Similarity=0.220  Sum_probs=61.1

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      ...++|.|++|..|.-+|++|+++|.+.+|-+|+..++..+..+|   |.+...+.+..  ++.+++++        ...
T Consensus         6 e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~L---G~~~~~~p~~~--p~~~~~~~--------~~~   72 (382)
T COG3268           6 EYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASL---GPEAAVFPLGV--PAALEAMA--------SRT   72 (382)
T ss_pred             ceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhc---CccccccCCCC--HHHHHHHH--------hcc
Confidence            457899999999999999999999999999999999998877766   33444444443  55555555        567


Q ss_pred             cEEEECCCCCC
Q 024230          100 NIFVNNVGTSV  110 (270)
Q Consensus       100 d~li~~ag~~~  110 (270)
                      ++++||+|-..
T Consensus        73 ~VVlncvGPyt   83 (382)
T COG3268          73 QVVLNCVGPYT   83 (382)
T ss_pred             eEEEecccccc
Confidence            99999999643

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=97.27  E-value=0.013  Score=49.84  Aligned_cols=144  Identities=14%  Similarity=0.123  Sum_probs=82.0

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCC-CeEEEeeCChhH-------------------HHHHHHHHHhcC--CeEEE
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLG-ATVHTCSRTETE-------------------LNECIHHLQMKG--LKVTG   73 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G-~~v~l~~r~~~~-------------------~~~~~~~~~~~~--~~~~~   73 (270)
                      ..|++++|+|.|+ ||+|..+|+.|++.| -++.+++.+.-.                   .+.+.+.+.+..  .++..
T Consensus        26 ~kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~  104 (268)
T PRK15116         26 QLFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTV  104 (268)
T ss_pred             HHhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEE
Confidence            4678899999976 699999999999999 479888875321                   122333333322  23333


Q ss_pred             EEccCCCHHHHHHHHHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEE
Q 024230           74 SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIV  153 (270)
Q Consensus        74 ~~~D~~~~~~~~~~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii  153 (270)
                      +. +.-+++.+..++       ..+.|++|.+....                     ..-..+.+.+    .+.+ -.+|
T Consensus       105 i~-~~i~~e~~~~ll-------~~~~D~VIdaiD~~---------------------~~k~~L~~~c----~~~~-ip~I  150 (268)
T PRK15116        105 VD-DFITPDNVAEYM-------SAGFSYVIDAIDSV---------------------RPKAALIAYC----RRNK-IPLV  150 (268)
T ss_pred             Ee-cccChhhHHHHh-------cCCCCEEEEcCCCH---------------------HHHHHHHHHH----HHcC-CCEE
Confidence            31 222333333332       13577777776531                     0111222222    3332 3455


Q ss_pred             EecCccccccCCCChhhhhhHHHHHHHHHHHHHHHcc-CCce
Q 024230          154 LMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAK-DNIR  194 (270)
Q Consensus       154 ~iss~~~~~~~~~~~~y~~sKaal~~~~~sla~el~~-~~i~  194 (270)
                      .+...++...+...-.-..+|.-...|++.+.++|.+ +||+
T Consensus       151 ~~gGag~k~dp~~~~~~di~~t~~~pla~~~R~~lr~~~~~~  192 (268)
T PRK15116        151 TTGGAGGQIDPTQIQVVDLAKTIQDPLAAKLRERLKSDFGVV  192 (268)
T ss_pred             EECCcccCCCCCeEEEEeeecccCChHHHHHHHHHHHhhCCC
Confidence            5555444433222223456677778999999999998 5764

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.26  E-value=0.0016  Score=55.81  Aligned_cols=71  Identities=20%  Similarity=0.243  Sum_probs=49.6

Q ss_pred             ccccccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCC-CHHHHHHHH
Q 024230           10 HSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVS-SRPQRQTLI   88 (270)
Q Consensus        10 ~~~~~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~   88 (270)
                      +...+++. .||++.|+|++| +|.--++.-...|++|+.+++...+-++..+.+   |++.+   .|.+ |++.++++.
T Consensus       173 pLk~~g~~-pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~L---GAd~f---v~~~~d~d~~~~~~  244 (360)
T KOG0023|consen  173 PLKRSGLG-PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSL---GADVF---VDSTEDPDIMKAIM  244 (360)
T ss_pred             hhHHcCCC-CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhc---Cccee---EEecCCHHHHHHHH
Confidence            34455667 999999999998 876555554555999999999987666655544   66655   4566 555555555

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.26  E-value=0.0021  Score=55.04  Aligned_cols=82  Identities=18%  Similarity=0.238  Sum_probs=60.1

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .+.+|++++|.|+ ||.+++++..|++.|. +++++.|+.++.+++.+.+.+.+..+.  ..+..+.+..          
T Consensus       122 ~~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~--~~~~~~~~~~----------  188 (283)
T COG0169         122 VDVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVE--AAALADLEGL----------  188 (283)
T ss_pred             cccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcccccc--cccccccccc----------
Confidence            5778999999987 6889999999999995 799999999999998888876543211  1222221110          


Q ss_pred             cCCcccEEEECCCCCCCC
Q 024230           95 FNGKLNIFVNNVGTSVLK  112 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~  112 (270)
                        ...|++||+.......
T Consensus       189 --~~~dliINaTp~Gm~~  204 (283)
T COG0169         189 --EEADLLINATPVGMAG  204 (283)
T ss_pred             --cccCEEEECCCCCCCC
Confidence              1379999998775443

>cd00704 MDH Malate dehydrogenase

Probab=97.26  E-value=0.003  Score=55.39  Aligned_cols=110  Identities=10%  Similarity=0.142  Sum_probs=64.9

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCC-------eEEEeeCCh--hHHHHHHHHHHhcCCeEEEEEccCCCHHHH--H--HHH
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGA-------TVHTCSRTE--TELNECIHHLQMKGLKVTGSVCDVSSRPQR--Q--TLI   88 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~-------~v~l~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~--~--~~~   88 (270)
                      +|.|||++|.+|..++..|+..|.       +++|+++++  +.++.              ...|+.+....  .  ...
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g--------------~~~Dl~d~~~~~~~~~~i~   67 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEG--------------VVMELQDCAFPLLKGVVIT   67 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccce--------------eeeehhhhcccccCCcEEe
Confidence            689999999999999999998763       499999987  33222              22333332100  0  000


Q ss_pred             HHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCcEEEEec
Q 024230           89 NTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRAS--GAASIVLMS  156 (270)
Q Consensus        89 ~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~--~~g~ii~is  156 (270)
                      ....+.+ ...|++|+.||.... +  ..+.   .+.+..|+.    +++.+.+.+.+.  ..+.+|++|
T Consensus        68 ~~~~~~~-~~aDiVVitAG~~~~-~--g~tR---~dll~~N~~----i~~~i~~~i~~~~~~~~iiivvs  126 (323)
T cd00704          68 TDPEEAF-KDVDVAILVGAFPRK-P--GMER---ADLLRKNAK----IFKEQGEALNKVAKPTVKVLVVG  126 (323)
T ss_pred             cChHHHh-CCCCEEEEeCCCCCC-c--CCcH---HHHHHHhHH----HHHHHHHHHHHhCCCCeEEEEeC
Confidence            1112222 579999999998532 1  2233   344666655    444555555665  245566654

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.23  E-value=0.0037  Score=55.12  Aligned_cols=82  Identities=18%  Similarity=0.307  Sum_probs=59.0

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCCh---------------------hHHHHHHHHHHhc--CCeE
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTE---------------------TELNECIHHLQMK--GLKV   71 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~---------------------~~~~~~~~~~~~~--~~~~   71 (270)
                      -.|++++|+|.|+ ||+|..+|+.|++.|. ++.++|++.                     .+.+.+.+.+++.  ..++
T Consensus        20 ~~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i   98 (338)
T PRK12475         20 RKIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEI   98 (338)
T ss_pred             HhhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEE
Confidence            4688899999997 7899999999999997 799998864                     2334444555554  3456


Q ss_pred             EEEEccCCCHHHHHHHHHHHHHHcCCcccEEEECCC
Q 024230           72 TGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVG  107 (270)
Q Consensus        72 ~~~~~D~~~~~~~~~~~~~i~~~~~~~id~li~~ag  107 (270)
                      ..+..|++ .+.+++++        ...|++|.+..
T Consensus        99 ~~~~~~~~-~~~~~~~~--------~~~DlVid~~D  125 (338)
T PRK12475         99 VPVVTDVT-VEELEELV--------KEVDLIIDATD  125 (338)
T ss_pred             EEEeccCC-HHHHHHHh--------cCCCEEEEcCC
Confidence            66666775 33444443        56899998875

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.20  E-value=0.0061  Score=53.08  Aligned_cols=111  Identities=15%  Similarity=0.138  Sum_probs=70.0

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCC--CeEEEeeCChhHHHHHHHHHHhc----CCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLG--ATVHTCSRTETELNECIHHLQMK----GLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G--~~v~l~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      |+|.|.|+ |++|.++|..|+.+|  .+|++++++++..+....+++..    +...... .  .+.+       +    
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~-~--~~~~-------~----   65 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK-A--GDYS-------D----   65 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE-c--CCHH-------H----
Confidence            46889996 899999999999999  58999999998887777766542    1112111 1  1211       1    


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecC
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSS  157 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss  157 (270)
                      + ...|++|+++|.... +  ..+..   +.++.|..=...+    .+.+++.. .+.++++|-
T Consensus        66 l-~~aDIVIitag~~~~-~--g~~R~---dll~~N~~i~~~~----~~~i~~~~~~~~vivvsN  118 (306)
T cd05291          66 C-KDADIVVITAGAPQK-P--GETRL---DLLEKNAKIMKSI----VPKIKASGFDGIFLVASN  118 (306)
T ss_pred             h-CCCCEEEEccCCCCC-C--CCCHH---HHHHHHHHHHHHH----HHHHHHhCCCeEEEEecC
Confidence            1 578999999997532 1  23332   3455555444444    44445543 456666654

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=97.19  E-value=0.0034  Score=54.13  Aligned_cols=84  Identities=14%  Similarity=0.226  Sum_probs=53.9

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChh---HHHHHHHHHHhcC-CeEEEEEccCCCHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTET---ELNECIHHLQMKG-LKVTGSVCDVSSRPQRQTLIN   89 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~---~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~   89 (270)
                      ..++++|+++|.|+ ||-+++++..|+..|. +|.+++|+++   +.+++.+.+.... ..+..  .++.+.+.+.    
T Consensus       119 ~~~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~--~~~~~~~~l~----  191 (288)
T PRK12749        119 GFDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTV--TDLADQQAFA----  191 (288)
T ss_pred             CCCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEE--echhhhhhhh----
Confidence            45789999999997 5559999999999997 7999999853   5566655553321 11111  1221111111    


Q ss_pred             HHHHHcCCcccEEEECCCCC
Q 024230           90 TVSSLFNGKLNIFVNNVGTS  109 (270)
Q Consensus        90 ~i~~~~~~~id~li~~ag~~  109 (270)
                         +.. .+.|++||+.-..
T Consensus       192 ---~~~-~~aDivINaTp~G  207 (288)
T PRK12749        192 ---EAL-ASADILTNGTKVG  207 (288)
T ss_pred             ---hhc-ccCCEEEECCCCC
Confidence               122 5789999987553

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=97.18  E-value=0.0012  Score=55.86  Aligned_cols=74  Identities=16%  Similarity=0.201  Sum_probs=55.4

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      ++|+|+||++- |+.+++.|.++|++|+...+++...+...    ..+  ...+..+..+.+++.+++.+      .++|
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~----~~g--~~~v~~g~l~~~~l~~~l~~------~~i~   67 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYP----IHQ--ALTVHTGALDPQELREFLKR------HSID   67 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccc----ccC--CceEEECCCCHHHHHHHHHh------cCCC
Confidence            47999999998 99999999999999999988876543322    111  22344667777777666654      5799


Q ss_pred             EEEECCC
Q 024230          101 IFVNNVG  107 (270)
Q Consensus       101 ~li~~ag  107 (270)
                      .+|+.+.
T Consensus        68 ~VIDAtH   74 (256)
T TIGR00715        68 ILVDATH   74 (256)
T ss_pred             EEEEcCC
Confidence            9999886

This enzyme was found to be a monomer by gel filtration.

>cd08293 PTGR2 Prostaglandin reductase

Probab=97.15  E-value=0.0049  Score=54.23  Aligned_cols=79  Identities=16%  Similarity=0.253  Sum_probs=52.8

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      |++++|+|++|++|..++......|+ +|+.+++++++.+.+.+++   |....   .|..+ +++.+.+   .+..++.
T Consensus       155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~l---Ga~~v---i~~~~-~~~~~~i---~~~~~~g  224 (345)
T cd08293         155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSEL---GFDAA---INYKT-DNVAERL---RELCPEG  224 (345)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhc---CCcEE---EECCC-CCHHHHH---HHHCCCC
Confidence            38999999999999999988888898 7999988887765544333   43222   22222 2222222   2223346


Q ss_pred             ccEEEECCCC
Q 024230           99 LNIFVNNVGT  108 (270)
Q Consensus        99 id~li~~ag~  108 (270)
                      +|+++++.|.
T Consensus       225 vd~vid~~g~  234 (345)
T cd08293         225 VDVYFDNVGG  234 (345)
T ss_pred             ceEEEECCCc
Confidence            9999998873

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=97.15  E-value=0.019  Score=47.88  Aligned_cols=149  Identities=15%  Similarity=0.143  Sum_probs=85.0

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCCh-------------------hHHHHHHHHHHhcC--CeEEE
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTE-------------------TELNECIHHLQMKG--LKVTG   73 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~-------------------~~~~~~~~~~~~~~--~~~~~   73 (270)
                      -.|++++|+|.|. ||+|..+++.|++.|. ++.++|.+.                   .+.+...+.+.+..  .++..
T Consensus         7 ~~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~   85 (231)
T cd00755           7 EKLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDA   85 (231)
T ss_pred             HHHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEE
Confidence            3577889999976 6999999999999997 688887653                   12233344444332  34444


Q ss_pred             EEccCCCHHHHHHHHHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEE
Q 024230           74 SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIV  153 (270)
Q Consensus        74 ~~~D~~~~~~~~~~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii  153 (270)
                      +...++ +++...++       ..++|++|.+....          +           .-..+.+.+    .+.+ -.+|
T Consensus        86 ~~~~i~-~~~~~~l~-------~~~~D~VvdaiD~~----------~-----------~k~~L~~~c----~~~~-ip~I  131 (231)
T cd00755          86 VEEFLT-PDNSEDLL-------GGDPDFVVDAIDSI----------R-----------AKVALIAYC----RKRK-IPVI  131 (231)
T ss_pred             eeeecC-HhHHHHHh-------cCCCCEEEEcCCCH----------H-----------HHHHHHHHH----HHhC-CCEE
Confidence            443333 23333332       13578888876431          1           111222333    2322 2344


Q ss_pred             EecCccccccCCCChhhhhhHHHHHHHHHHHHHHHccCCce--EEEEe
Q 024230          154 LMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIR--TNSVA  199 (270)
Q Consensus       154 ~iss~~~~~~~~~~~~y~~sKaal~~~~~sla~el~~~~i~--v~~v~  199 (270)
                      ...+.++...+..-..-..+|.-...|++.+.++|.+.|++  +.+|+
T Consensus       132 ~s~g~g~~~dp~~i~i~di~~t~~~pla~~~R~~Lrk~~~~~~~~~v~  179 (231)
T cd00755         132 SSMGAGGKLDPTRIRVADISKTSGDPLARKVRKRLRKRGIFFGVPVVY  179 (231)
T ss_pred             EEeCCcCCCCCCeEEEccEeccccCcHHHHHHHHHHHcCCCCCeEEEe
Confidence            44443333222111223456666788999999999998885  55443

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.11  E-value=0.0062  Score=49.73  Aligned_cols=82  Identities=18%  Similarity=0.253  Sum_probs=55.6

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCCh-------------------hHHHHHHHHHHhcC--CeEEE
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTE-------------------TELNECIHHLQMKG--LKVTG   73 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~-------------------~~~~~~~~~~~~~~--~~~~~   73 (270)
                      ..|++++|+|.| .||+|..+++.|+..|. ++.++|.+.                   .+.+.+.+.+++..  .++..
T Consensus        17 ~kl~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~   95 (202)
T TIGR02356        17 QRLLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTA   95 (202)
T ss_pred             HHhcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEE
Confidence            478899999998 67999999999999997 799998872                   34444555555543  33444


Q ss_pred             EEccCCCHHHHHHHHHHHHHHcCCcccEEEECCC
Q 024230           74 SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVG  107 (270)
Q Consensus        74 ~~~D~~~~~~~~~~~~~i~~~~~~~id~li~~ag  107 (270)
                      +..++. .+++.+++        .+.|++|.+..
T Consensus        96 ~~~~i~-~~~~~~~~--------~~~D~Vi~~~d  120 (202)
T TIGR02356        96 LKERVT-AENLELLI--------NNVDLVLDCTD  120 (202)
T ss_pred             ehhcCC-HHHHHHHH--------hCCCEEEECCC
Confidence            433443 23333322        56899988875

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.10  E-value=0.0022  Score=55.09  Aligned_cols=40  Identities=30%  Similarity=0.331  Sum_probs=36.8

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCC
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRT   53 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~   53 (270)
                      +..+++||+++|.|.++-.|+.++..|+++|++|.++.|.
T Consensus       153 ~~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~  192 (283)
T PRK14192        153 YNIELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR  192 (283)
T ss_pred             cCCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence            4678999999999999999999999999999999988874

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=97.10  E-value=0.011  Score=49.54  Aligned_cols=79  Identities=24%  Similarity=0.294  Sum_probs=53.5

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      .+|++++|+|+++ +|..+++.+...|.+|+.++++++..+.+    +..+...   ..|..+.+....+.    ....+
T Consensus       133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~---~~~~~~~~~~~~~~----~~~~~  200 (271)
T cd05188         133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA----KELGADH---VIDYKEEDLEEELR----LTGGG  200 (271)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH----HHhCCce---eccCCcCCHHHHHH----HhcCC
Confidence            4688999999999 99999999999999999999987665443    2223221   12333333333322    11225


Q ss_pred             cccEEEECCCC
Q 024230           98 KLNIFVNNVGT  108 (270)
Q Consensus        98 ~id~li~~ag~  108 (270)
                      .+|+++++++.
T Consensus       201 ~~d~vi~~~~~  211 (271)
T cd05188         201 GADVVIDAVGG  211 (271)
T ss_pred             CCCEEEECCCC
Confidence            79999999874

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=97.08  E-value=0.0013  Score=52.06  Aligned_cols=39  Identities=26%  Similarity=0.336  Sum_probs=35.6

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTE   54 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~   54 (270)
                      .+|+||+++|+|++.-+|..+++.|.++|++|.++.|+.
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~   78 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT   78 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence            589999999999977789999999999999999999874

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=97.08  E-value=0.0045  Score=54.08  Aligned_cols=80  Identities=15%  Similarity=0.246  Sum_probs=54.2

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      .|.+|+|+|++|++|..++......|++|+.+++++++.+.+    ++.|....   .|..+.+...+.+...   .++.
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~----~~lGa~~v---i~~~~~~~~~~~~~~~---~~~g  207 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL----KKLGFDVA---FNYKTVKSLEETLKKA---SPDG  207 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHcCCCEE---EeccccccHHHHHHHh---CCCC
Confidence            578999999999999999998888999999999887765443    23343322   2222222333333322   2246


Q ss_pred             ccEEEECCCC
Q 024230           99 LNIFVNNVGT  108 (270)
Q Consensus        99 id~li~~ag~  108 (270)
                      +|+++.+.|.
T Consensus       208 vdvv~d~~G~  217 (325)
T TIGR02825       208 YDCYFDNVGG  217 (325)
T ss_pred             eEEEEECCCH
Confidence            9999998873

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=97.07  E-value=0.082  Score=44.98  Aligned_cols=177  Identities=15%  Similarity=0.113  Sum_probs=101.6

Q ss_pred             CCCEEEEecCCCcHHHH--HHHHHHHCCCeEEEeeCC-------h-----hHHHHHHHHHHhcCCeEEEEEccCCCHHHH
Q 024230           19 QGMTALVTGGTKGLGLA--VVEELSMLGATVHTCSRT-------E-----TELNECIHHLQMKGLKVTGSVCDVSSRPQR   84 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~--la~~l~~~G~~v~l~~r~-------~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   84 (270)
                      -.|+|||+|+|+|.|.+  ++..|- .|+..+.+...       +     -....+.+.....|.-...+..|.-+.+-=
T Consensus        40 gPKkVLviGaSsGyGLa~RIsaaFG-~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~kGlyAksingDaFS~e~k  118 (398)
T COG3007          40 GPKKVLVIGASSGYGLAARISAAFG-PGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQKGLYAKSINGDAFSDEMK  118 (398)
T ss_pred             CCceEEEEecCCcccHHHHHHHHhC-CCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhcCceeeecccchhhHHHH
Confidence            46899999999999987  566666 56665544221       1     112334444455565566677888776776


Q ss_pred             HHHHHHHHHHcCCcccEEEECCCCCCCC-------------C---------------------CCCCCHHHHHHHHHHhh
Q 024230           85 QTLINTVSSLFNGKLNIFVNNVGTSVLK-------------P---------------------TLEYNAEDFSLVMSTNF  130 (270)
Q Consensus        85 ~~~~~~i~~~~~~~id~li~~ag~~~~~-------------~---------------------~~~~~~~~~~~~~~~n~  130 (270)
                      +..++.|+..+ |++|.+|+.-+....+             |                     +..-+.++++++..|.=
T Consensus       119 ~kvIe~Ik~~~-g~vDlvvYSlAsp~Rk~pktgev~~SalKpIg~a~~~~~ldt~kd~i~e~~lepAseqEI~~Tv~VMG  197 (398)
T COG3007         119 QKVIEAIKQDF-GKVDLVVYSLASPRRKHPKTGEVFRSALKPIGEAVSGRTLDTEKDVIIEATLEPASEQEIADTVAVMG  197 (398)
T ss_pred             HHHHHHHHHhh-ccccEEEEeccCccccCCCcchhhHhhhcchhhhccccccccccceeeeeecccccHHHHHHHHHhhC
Confidence            77888888888 7999999886542110             0                     12234455555444322


Q ss_pred             HHHH-HHHHHHHHHHHhcCCcEEEEecCccccccCC--CChhhhhhHHHHHHHHHHHHHHHccCCceEEE
Q 024230          131 ESAF-HLCQLAHPLLRASGAASIVLMSSALGIVSAN--VGTVYSATKGAMNQLAKNLACEWAKDNIRTNS  197 (270)
Q Consensus       131 ~~~~-~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~--~~~~y~~sKaal~~~~~sla~el~~~~i~v~~  197 (270)
                      ---+ ..+++++..=.-..+-+-|-.|-+....-.|  -....+.+|.=|+.-++.+...|+..+=..++
T Consensus       198 GeDWq~WidaLl~advlaeg~kTiAfsYiG~~iT~~IYw~GtiG~AK~DLd~~~~~inekLa~~gG~A~v  267 (398)
T COG3007         198 GEDWQMWIDALLEADVLAEGAKTIAFSYIGEKITHPIYWDGTIGRAKKDLDQKSLAINEKLAALGGGARV  267 (398)
T ss_pred             cchHHHHHHHHHhccccccCceEEEEEecCCccccceeeccccchhhhcHHHHHHHHHHHHHhcCCCeee
Confidence            1111 1233332211111122333333333222222  13467999999999999999999877544433

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.06  E-value=0.0065  Score=53.40  Aligned_cols=80  Identities=19%  Similarity=0.371  Sum_probs=53.9

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      .|.+++|+|++|++|..++......|++|+.+++++++.+.+.+.+   |... +  .|-.+.++..+.+   .+..++.
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~l---Ga~~-v--i~~~~~~~~~~~i---~~~~~~g  221 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKL---GFDD-A--FNYKEEPDLDAAL---KRYFPNG  221 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCce-e--EEcCCcccHHHHH---HHhCCCC
Confidence            5789999999999999999988899999999998887765543322   3221 1  2222222322222   2223347


Q ss_pred             ccEEEECCC
Q 024230           99 LNIFVNNVG  107 (270)
Q Consensus        99 id~li~~ag  107 (270)
                      +|+++.+.|
T Consensus       222 vd~v~d~~g  230 (338)
T cd08295         222 IDIYFDNVG  230 (338)
T ss_pred             cEEEEECCC
Confidence            999999887

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=97.05  E-value=0.0043  Score=52.89  Aligned_cols=108  Identities=16%  Similarity=0.207  Sum_probs=75.2

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      +|.+|+|++|+|.+|.-+...-.-+|++|+.+.-.+++..-+.+++.   -..   ..|-.++    ++.+.+.+..+..
T Consensus       150 ~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lG---fD~---~idyk~~----d~~~~L~~a~P~G  219 (340)
T COG2130         150 AGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELG---FDA---GIDYKAE----DFAQALKEACPKG  219 (340)
T ss_pred             CCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcC---Cce---eeecCcc----cHHHHHHHHCCCC
Confidence            58999999999999987666666789999999988888765554442   111   1233332    3445555556678


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC
Q 024230           99 LNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA  164 (270)
Q Consensus        99 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~  164 (270)
                      +|+.+-|.|..                          +..+.+++|..  .++|+.++-++.|...
T Consensus       220 IDvyfeNVGg~--------------------------v~DAv~~~ln~--~aRi~~CG~IS~YN~~  257 (340)
T COG2130         220 IDVYFENVGGE--------------------------VLDAVLPLLNL--FARIPVCGAISQYNAP  257 (340)
T ss_pred             eEEEEEcCCch--------------------------HHHHHHHhhcc--ccceeeeeehhhcCCC
Confidence            99999999852                          23455666654  4689998888776554

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=97.05  E-value=0.0069  Score=53.66  Aligned_cols=80  Identities=16%  Similarity=0.328  Sum_probs=53.8

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      .|.+++|+|++|++|..++......|++|+.+++++++.+.+.++   .|....   .|-.+.+++.+.+   .+..++.
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~---lGa~~v---i~~~~~~~~~~~i---~~~~~~g  228 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFDEA---FNYKEEPDLDAAL---KRYFPEG  228 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHh---cCCCEE---EECCCcccHHHHH---HHHCCCC
Confidence            578999999999999999998889999999988888775543322   343222   2222222333322   2222346


Q ss_pred             ccEEEECCC
Q 024230           99 LNIFVNNVG  107 (270)
Q Consensus        99 id~li~~ag  107 (270)
                      +|+++.+.|
T Consensus       229 vD~v~d~vG  237 (348)
T PLN03154        229 IDIYFDNVG  237 (348)
T ss_pred             cEEEEECCC
Confidence            999999987

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=97.05  E-value=0.0047  Score=53.52  Aligned_cols=43  Identities=28%  Similarity=0.417  Sum_probs=37.9

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELN   58 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~   58 (270)
                      ..+++|++++|.|. |++|+.++..|...|++|.+++|+++..+
T Consensus       147 ~~~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~  189 (296)
T PRK08306        147 PITIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLA  189 (296)
T ss_pred             CCCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence            35778999999997 67999999999999999999999977543

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=97.02  E-value=0.0039  Score=56.85  Aligned_cols=47  Identities=26%  Similarity=0.378  Sum_probs=40.7

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHH
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHL   64 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~   64 (270)
                      ++.+++++|.|+ |.+|..+++.|...|+ +|++++|+.++.+++.+.+
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~  226 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF  226 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc
Confidence            588999999987 9999999999999997 7999999988876665543

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=97.01  E-value=0.0059  Score=54.03  Aligned_cols=80  Identities=23%  Similarity=0.404  Sum_probs=54.5

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      +|+++||.||+||+|...++.....|+..+++.++.+..+ +.+.+   |...   ..|-.+++    ..+++.+...++
T Consensus       157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~-l~k~l---GAd~---vvdy~~~~----~~e~~kk~~~~~  225 (347)
T KOG1198|consen  157 KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLE-LVKKL---GADE---VVDYKDEN----VVELIKKYTGKG  225 (347)
T ss_pred             CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHH-HHHHc---CCcE---eecCCCHH----HHHHHHhhcCCC
Confidence            6789999999999999999999999966666666666543 33333   3322   24666633    333333332368


Q ss_pred             ccEEEECCCCC
Q 024230           99 LNIFVNNVGTS  109 (270)
Q Consensus        99 id~li~~ag~~  109 (270)
                      +|+++.|.|..
T Consensus       226 ~DvVlD~vg~~  236 (347)
T KOG1198|consen  226 VDVVLDCVGGS  236 (347)
T ss_pred             ccEEEECCCCC
Confidence            99999999874

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.99  E-value=0.0046  Score=50.46  Aligned_cols=38  Identities=18%  Similarity=0.159  Sum_probs=34.9

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTE   54 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~   54 (270)
                      .+++||+++|+|| |.+|...++.|.+.|++|.++++..
T Consensus         6 l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          6 IDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            5899999999998 8999999999999999999998754

>PRK14968 putative methyltransferase; Provisional

Probab=96.98  E-value=0.022  Score=45.41  Aligned_cols=79  Identities=14%  Similarity=0.112  Sum_probs=56.4

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCe---EEEEEccCCCHHHHHHHHHHHHHH
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLK---VTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .+++++|-.|++.|.   ++..+++++.+|+.++.+++..+...+.+...+..   +.++.+|+.+.     +       
T Consensus        22 ~~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-----~-------   86 (188)
T PRK14968         22 KKGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP-----F-------   86 (188)
T ss_pred             cCCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccc-----c-------
Confidence            477899999988777   56666666899999999998877776666554432   77777876441     1       


Q ss_pred             cCCcccEEEECCCCCCC
Q 024230           95 FNGKLNIFVNNVGTSVL  111 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~  111 (270)
                      ...++|.++.|..+...
T Consensus        87 ~~~~~d~vi~n~p~~~~  103 (188)
T PRK14968         87 RGDKFDVILFNPPYLPT  103 (188)
T ss_pred             cccCceEEEECCCcCCC
Confidence            11368999998776543

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.97  E-value=0.0068  Score=52.75  Aligned_cols=75  Identities=27%  Similarity=0.413  Sum_probs=51.8

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      .+.+++|+|+++++|.++++.+...|++|+.+.++++..+.+    ...+... .+  |.   ++   ..+.+.+ . ..
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~~~~~-~~--~~---~~---~~~~~~~-~-~~  226 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL----KELGADY-VI--DG---SK---FSEDVKK-L-GG  226 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH----HHcCCcE-EE--ec---HH---HHHHHHh-c-cC
Confidence            478999999999999999999999999999999887665443    2223221 11  21   11   2222222 2 37


Q ss_pred             ccEEEECCCC
Q 024230           99 LNIFVNNVGT  108 (270)
Q Consensus        99 id~li~~ag~  108 (270)
                      +|++++++|.
T Consensus       227 ~d~v~~~~g~  236 (332)
T cd08259         227 ADVVIELVGS  236 (332)
T ss_pred             CCEEEECCCh
Confidence            9999999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=96.96  E-value=0.012  Score=51.69  Aligned_cols=150  Identities=9%  Similarity=0.055  Sum_probs=90.1

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCC-------eEEEeeCChhH--HHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGA-------TVHTCSRTETE--LNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINT   90 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~-------~v~l~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   90 (270)
                      .++|.|+|++|.+|.++|..++..|.       +++|++.+++.  ++....++......... ...++. .+ .+.   
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~-~~~i~~-~~-~~~---   75 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLA-EIVITD-DP-NVA---   75 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccC-ceEEec-Cc-HHH---
Confidence            46899999999999999999999885       79999996543  43333333321100000 001110 11 111   


Q ss_pred             HHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CcEEEEecCccc--------
Q 024230           91 VSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG--AASIVLMSSALG--------  160 (270)
Q Consensus        91 i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~--~g~ii~iss~~~--------  160 (270)
                          + ..-|++|.+||.... +  ..+..   +.+..|+.    +++.+.+.+.+..  .+.+|++|-..-        
T Consensus        76 ----~-~daDivvitaG~~~k-~--g~tR~---dll~~N~~----i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k  140 (322)
T cd01338          76 ----F-KDADWALLVGAKPRG-P--GMERA---DLLKANGK----IFTAQGKALNDVASRDVKVLVVGNPCNTNALIAMK  140 (322)
T ss_pred             ----h-CCCCEEEEeCCCCCC-C--CCcHH---HHHHHHHH----HHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHHHH
Confidence                1 578999999997432 2  23433   34566655    4444455556554  456666654221        


Q ss_pred             cc-cCCCChhhhhhHHHHHHHHHHHHHHHcc
Q 024230          161 IV-SANVGTVYSATKGAMNQLAKNLACEWAK  190 (270)
Q Consensus       161 ~~-~~~~~~~y~~sKaal~~~~~sla~el~~  190 (270)
                      .. +.|....|+.++.--.-|...+++.+.-
T Consensus       141 ~sg~~p~~~ViG~t~LDs~Rl~~~la~~lgv  171 (322)
T cd01338         141 NAPDIPPDNFTAMTRLDHNRAKSQLAKKAGV  171 (322)
T ss_pred             HcCCCChHheEEehHHHHHHHHHHHHHHhCc
Confidence            11 2444557888898888999999988763

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.95  E-value=0.0021  Score=49.15  Aligned_cols=42  Identities=29%  Similarity=0.325  Sum_probs=38.3

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChh
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTET   55 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~   55 (270)
                      +..+++||.++|.|-+.-+|+.++..|.++|+.|.++.++..
T Consensus        22 ~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~   63 (140)
T cd05212          22 EGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI   63 (140)
T ss_pred             cCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc
Confidence            467999999999999999999999999999999999986554

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.95  E-value=0.0045  Score=56.27  Aligned_cols=74  Identities=22%  Similarity=0.332  Sum_probs=53.3

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCC-CeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLG-ATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G-~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      ++++++++|.|+ |.+|..+++.|...| .+|++++|+.++.+.+.+.+   +..  .+.     .+++.+.+       
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~---g~~--~i~-----~~~l~~~l-------  238 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKEL---GGE--AVK-----FEDLEEYL-------  238 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc---CCe--Eee-----HHHHHHHH-------
Confidence            588999999997 999999999999999 68999999988766655543   221  111     12333333       


Q ss_pred             CCcccEEEECCCCC
Q 024230           96 NGKLNIFVNNVGTS  109 (270)
Q Consensus        96 ~~~id~li~~ag~~  109 (270)
                       ...|++|.+.+..
T Consensus       239 -~~aDvVi~aT~s~  251 (417)
T TIGR01035       239 -AEADIVISSTGAP  251 (417)
T ss_pred             -hhCCEEEECCCCC
Confidence             3578999887653

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=96.94  E-value=0.011  Score=52.32  Aligned_cols=82  Identities=21%  Similarity=0.297  Sum_probs=56.0

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCCh---------------------hHHHHHHHHHHhcC--CeE
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTE---------------------TELNECIHHLQMKG--LKV   71 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~---------------------~~~~~~~~~~~~~~--~~~   71 (270)
                      -.|+.++|+|.|+ ||+|..+|+.|++.|. ++.+++++.                     .+.+...+.+++..  .++
T Consensus        20 ~~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v   98 (339)
T PRK07688         20 QKLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRV   98 (339)
T ss_pred             HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEE
Confidence            4788899999998 8999999999999998 799999863                     22333344444432  345


Q ss_pred             EEEEccCCCHHHHHHHHHHHHHHcCCcccEEEECCC
Q 024230           72 TGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVG  107 (270)
Q Consensus        72 ~~~~~D~~~~~~~~~~~~~i~~~~~~~id~li~~ag  107 (270)
                      ..+..+++. +++.+++        .+.|++|.+..
T Consensus        99 ~~~~~~~~~-~~~~~~~--------~~~DlVid~~D  125 (339)
T PRK07688         99 EAIVQDVTA-EELEELV--------TGVDLIIDATD  125 (339)
T ss_pred             EEEeccCCH-HHHHHHH--------cCCCEEEEcCC
Confidence            555556642 3333333        46788888854

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=96.93  E-value=0.0056  Score=52.65  Aligned_cols=79  Identities=24%  Similarity=0.427  Sum_probs=54.3

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC-C
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN-G   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~-~   97 (270)
                      ++++++|+|+++++|..+++.+...|++|++++++++..+.+ +.   .+...   ..+..+.+....+.    .... +
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~---~g~~~---~~~~~~~~~~~~~~----~~~~~~  207 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RA---LGADV---AINYRTEDFAEEVK----EATGGR  207 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HH---cCCCE---EEeCCchhHHHHHH----HHhCCC
Confidence            678999999999999999999999999999999987765543 22   23221   23333332222222    2221 4


Q ss_pred             cccEEEECCCC
Q 024230           98 KLNIFVNNVGT  108 (270)
Q Consensus        98 ~id~li~~ag~  108 (270)
                      .+|.+++++|.
T Consensus       208 ~~d~vi~~~g~  218 (323)
T cd05276         208 GVDVILDMVGG  218 (323)
T ss_pred             CeEEEEECCch
Confidence            69999999884

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=96.92  E-value=0.031  Score=51.94  Aligned_cols=86  Identities=15%  Similarity=0.161  Sum_probs=57.2

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCH-------------HH
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR-------------PQ   83 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-------------~~   83 (270)
                      ...+.+|+|+|+ |.+|...+......|++|+++++++++++..    ++.|.+...+  |..+.             +.
T Consensus       162 ~~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~a----eslGA~~v~i--~~~e~~~~~~gya~~~s~~~  234 (509)
T PRK09424        162 KVPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQV----ESMGAEFLEL--DFEEEGGSGDGYAKVMSEEF  234 (509)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHcCCeEEEe--ccccccccccchhhhcchhH
Confidence            456899999987 7899999999999999999999999886643    3345553322  32221             11


Q ss_pred             HHHHHHHHHHHcCCcccEEEECCCCCC
Q 024230           84 RQTLINTVSSLFNGKLNIFVNNVGTSV  110 (270)
Q Consensus        84 ~~~~~~~i~~~~~~~id~li~~ag~~~  110 (270)
                      .+...+.+.+.. +..|++|.+++...
T Consensus       235 ~~~~~~~~~~~~-~gaDVVIetag~pg  260 (509)
T PRK09424        235 IKAEMALFAEQA-KEVDIIITTALIPG  260 (509)
T ss_pred             HHHHHHHHHhcc-CCCCEEEECCCCCc
Confidence            112222222222 46999999999854

>PRK04148 hypothetical protein; Provisional

Probab=96.91  E-value=0.011  Score=44.78  Aligned_cols=81  Identities=12%  Similarity=0.113  Sum_probs=60.1

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCC----------------
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSS----------------   80 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~----------------   80 (270)
                      ..++++++++|.+  .|.++|..|++.|++|+.++.+++..+...+    .  .+.++..|+.+                
T Consensus        14 ~~~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~----~--~~~~v~dDlf~p~~~~y~~a~liysir   85 (134)
T PRK04148         14 KGKNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKK----L--GLNAFVDDLFNPNLEIYKNAKLIYSIR   85 (134)
T ss_pred             cccCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHH----h--CCeEEECcCCCCCHHHHhcCCEEEEeC
Confidence            3467889999998  8888999999999999999999986554432    2  25677888876                


Q ss_pred             -HHHHHHHHHHHHHHcCCcccEEEECCC
Q 024230           81 -RPQRQTLINTVSSLFNGKLNIFVNNVG  107 (270)
Q Consensus        81 -~~~~~~~~~~i~~~~~~~id~li~~ag  107 (270)
                       +.+++..+-++.++.  ..|.+|..-+
T Consensus        86 pp~el~~~~~~la~~~--~~~~~i~~l~  111 (134)
T PRK04148         86 PPRDLQPFILELAKKI--NVPLIIKPLS  111 (134)
T ss_pred             CCHHHHHHHHHHHHHc--CCCEEEEcCC
Confidence             346677777776664  5677775543

>PLN00203 glutamyl-tRNA reductase

Probab=96.91  E-value=0.0065  Score=56.59  Aligned_cols=77  Identities=13%  Similarity=0.206  Sum_probs=55.1

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      ++.+++|+|.|+ |.+|..+++.|...|. +|++++|+.+..+.+...+.  +..+.+     ...++....+       
T Consensus       263 ~l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~--g~~i~~-----~~~~dl~~al-------  327 (519)
T PLN00203        263 SHASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFP--DVEIIY-----KPLDEMLACA-------  327 (519)
T ss_pred             CCCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhC--CCceEe-----ecHhhHHHHH-------
Confidence            488999999999 9999999999999997 69999999988877766542  211111     1112222232       


Q ss_pred             CCcccEEEECCCCC
Q 024230           96 NGKLNIFVNNVGTS  109 (270)
Q Consensus        96 ~~~id~li~~ag~~  109 (270)
                       ...|++|.+.+..
T Consensus       328 -~~aDVVIsAT~s~  340 (519)
T PLN00203        328 -AEADVVFTSTSSE  340 (519)
T ss_pred             -hcCCEEEEccCCC
Confidence             4678888887643

>PTZ00117 malate dehydrogenase; Provisional

Probab=96.89  E-value=0.009  Score=52.33  Aligned_cols=120  Identities=11%  Similarity=0.077  Sum_probs=69.8

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCC-CeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLG-ATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G-~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      ++.++|.|+|+ |.+|..++..++..| .+|++++.+++.++....++.... ........+.-..+.+ .+        
T Consensus         3 ~~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~-~~~~~~~~i~~~~d~~-~l--------   71 (319)
T PTZ00117          3 VKRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFS-TLVGSNINILGTNNYE-DI--------   71 (319)
T ss_pred             CCCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhc-cccCCCeEEEeCCCHH-Hh--------
Confidence            45678999997 889999999999999 689999998876543222222211 1000000111001122 22        


Q ss_pred             CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCc
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSA  158 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~  158 (270)
                      ..-|++|.++|.....   ..+.   .+.+..|.    -+.+.+.+.|.+.. .+.+|+++-.
T Consensus        72 ~~ADiVVitag~~~~~---g~~r---~dll~~n~----~i~~~i~~~i~~~~p~a~vivvsNP  124 (319)
T PTZ00117         72 KDSDVVVITAGVQRKE---EMTR---EDLLTING----KIMKSVAESVKKYCPNAFVICVTNP  124 (319)
T ss_pred             CCCCEEEECCCCCCCC---CCCH---HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecCh
Confidence            4679999999874321   1232   34555666    34555566665554 3446666543

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.88  E-value=0.0062  Score=53.31  Aligned_cols=73  Identities=23%  Similarity=0.298  Sum_probs=53.2

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      .|++|+|+|.+ |+|-..++.....|++|+.++|++++++...+    .|....+   |.++++.++.+.        +.
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~----lGAd~~i---~~~~~~~~~~~~--------~~  229 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKK----LGADHVI---NSSDSDALEAVK--------EI  229 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHH----hCCcEEE---EcCCchhhHHhH--------hh
Confidence            48999999999 99988887777799999999999998866443    3444332   333444444333        23


Q ss_pred             ccEEEECCC
Q 024230           99 LNIFVNNVG  107 (270)
Q Consensus        99 id~li~~ag  107 (270)
                      +|+++.+++
T Consensus       230 ~d~ii~tv~  238 (339)
T COG1064         230 ADAIIDTVG  238 (339)
T ss_pred             CcEEEECCC
Confidence            799999987

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.88  E-value=0.0013  Score=44.09  Aligned_cols=35  Identities=31%  Similarity=0.453  Sum_probs=24.6

Q ss_pred             CC-CEEEEecCCCcHHHH--HHHHHHHCCCeEEEeeCCh
Q 024230           19 QG-MTALVTGGTKGLGLA--VVEELSMLGATVHTCSRTE   54 (270)
Q Consensus        19 ~g-k~vlItG~s~giG~~--la~~l~~~G~~v~l~~r~~   54 (270)
                      +| |+|||+|+|+|.|.+  ++..| ..|++.+.++...
T Consensus        37 ~GpK~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~fEk   74 (78)
T PF12242_consen   37 NGPKKVLVIGASTGYGLASRIAAAF-GAGADTIGVSFEK   74 (78)
T ss_dssp             TS-SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE---
T ss_pred             CCCceEEEEecCCcccHHHHHHHHh-cCCCCEEEEeecc
Confidence            55 999999999999999  77777 7788888776543

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.87  E-value=0.0074  Score=55.35  Aligned_cols=81  Identities=17%  Similarity=0.130  Sum_probs=53.4

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      |++.+|+++|+|.+ ++|.++|+.|+++|++|.+.+..+...  ....++.....+.+...... ..    ..       
T Consensus         1 ~~~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~~--~~~~l~~~~~gi~~~~g~~~-~~----~~-------   65 (445)
T PRK04308          1 MTFQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKPE--RVAQIGKMFDGLVFYTGRLK-DA----LD-------   65 (445)
T ss_pred             CCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCch--hHHHHhhccCCcEEEeCCCC-HH----HH-------
Confidence            45789999999986 999999999999999999998765431  12233332112333222211 11    11       


Q ss_pred             CCcccEEEECCCCCCCC
Q 024230           96 NGKLNIFVNNVGTSVLK  112 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~  112 (270)
                       ...|.+|..+|+.+..
T Consensus        66 -~~~d~vv~spgi~~~~   81 (445)
T PRK04308         66 -NGFDILALSPGISERQ   81 (445)
T ss_pred             -hCCCEEEECCCCCCCC
Confidence             3679999999997543

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.85  E-value=0.0064  Score=53.10  Aligned_cols=74  Identities=22%  Similarity=0.352  Sum_probs=54.1

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCC-CeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLG-ATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G-~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      ++.+++|+|.|+ |.+|..+++.|...| .+|++++|++++.+++.+++   +..+  .     +.+++.+.+       
T Consensus       175 ~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~---g~~~--~-----~~~~~~~~l-------  236 (311)
T cd05213         175 NLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL---GGNA--V-----PLDELLELL-------  236 (311)
T ss_pred             CccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc---CCeE--E-----eHHHHHHHH-------
Confidence            478999999987 999999999999987 47999999988877766554   2211  1     222333333       


Q ss_pred             CCcccEEEECCCCC
Q 024230           96 NGKLNIFVNNVGTS  109 (270)
Q Consensus        96 ~~~id~li~~ag~~  109 (270)
                       ...|++|.+.+..
T Consensus       237 -~~aDvVi~at~~~  249 (311)
T cd05213         237 -NEADVVISATGAP  249 (311)
T ss_pred             -hcCCEEEECCCCC
Confidence             4579999998863

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.84  E-value=0.013  Score=51.12  Aligned_cols=78  Identities=17%  Similarity=0.313  Sum_probs=52.9

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      .|.+++|+|++|++|..++......|++|+.+++++++.+.+    ++.|....   .|-.++ +..   +++....++.
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l----~~~Ga~~v---i~~~~~-~~~---~~v~~~~~~g  211 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWL----KELGFDAV---FNYKTV-SLE---EALKEAAPDG  211 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHcCCCEE---EeCCCc-cHH---HHHHHHCCCC
Confidence            578999999999999999999999999999999888765443    23343222   233222 222   2222222246


Q ss_pred             ccEEEECCC
Q 024230           99 LNIFVNNVG  107 (270)
Q Consensus        99 id~li~~ag  107 (270)
                      +|+++.+.|
T Consensus       212 vd~vld~~g  220 (329)
T cd08294         212 IDCYFDNVG  220 (329)
T ss_pred             cEEEEECCC
Confidence            999999887

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.80  E-value=0.012  Score=50.12  Aligned_cols=114  Identities=14%  Similarity=0.068  Sum_probs=68.2

Q ss_pred             EEEecCCCcHHHHHHHHHHHCC----CeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           23 ALVTGGTKGLGLAVVEELSMLG----ATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        23 vlItG~s~giG~~la~~l~~~G----~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      |.|+|++|.+|..++..|+..|    .+|+++|++++.++....+++......  ....+.-.++..+.+        ..
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~--~~~~i~~~~d~~~~~--------~~   70 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL--ADIKVSITDDPYEAF--------KD   70 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc--cCcEEEECCchHHHh--------CC
Confidence            4799998899999999999999    689999999988777766665432111  011111111112222        57


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEec
Q 024230           99 LNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMS  156 (270)
Q Consensus        99 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~is  156 (270)
                      .|++|..+|.....   ..+.   .+.+..|+--...+    .+.+++.. .+.+++++
T Consensus        71 aDiVv~t~~~~~~~---g~~r---~~~~~~n~~i~~~i----~~~i~~~~p~a~~i~~t  119 (263)
T cd00650          71 ADVVIITAGVGRKP---GMGR---LDLLKRNVPIVKEI----GDNIEKYSPDAWIIVVS  119 (263)
T ss_pred             CCEEEECCCCCCCc---CCCH---HHHHHHHHHHHHHH----HHHHHHHCCCeEEEEec
Confidence            89999999875332   1222   22344444444444    44444443 45566664

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.80  E-value=0.015  Score=52.36  Aligned_cols=48  Identities=27%  Similarity=0.348  Sum_probs=42.9

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCC-CeEEEeeCChhHHHHHHHHHH
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLG-ATVHTCSRTETELNECIHHLQ   65 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G-~~v~l~~r~~~~~~~~~~~~~   65 (270)
                      +|++|++||.|+ |-+|.-+|++|+++| .+|+++.|+.++.+++++++.
T Consensus       175 ~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~  223 (414)
T COG0373         175 SLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG  223 (414)
T ss_pred             ccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC
Confidence            589999999998 679999999999999 579999999999988887764

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.79  E-value=0.0078  Score=55.24  Aligned_cols=60  Identities=23%  Similarity=0.251  Sum_probs=44.5

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHH
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQT   86 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   86 (270)
                      ++++|.|+ |.+|+.+++.|.++|+.|++++++++..+.+.+.     ..+..+..|.++.+.+++
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~-----~~~~~~~gd~~~~~~l~~   60 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDR-----LDVRTVVGNGSSPDVLRE   60 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhh-----cCEEEEEeCCCCHHHHHH
Confidence            36888887 9999999999999999999999998876654331     124455667766554433

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=96.76  E-value=0.047  Score=50.66  Aligned_cols=85  Identities=15%  Similarity=0.135  Sum_probs=57.9

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCC-------------HHH
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSS-------------RPQ   83 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-------------~~~   83 (270)
                      .+.+.+++|.|+ |.+|...+..+...|+.|++++++.++++...    ..+.+  ++..|..+             .+.
T Consensus       161 ~vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~----~lGa~--~v~v~~~e~g~~~~gYa~~~s~~~  233 (511)
T TIGR00561       161 KVPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ----SMGAE--FLELDFKEEGGSGDGYAKVMSEEF  233 (511)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HcCCe--EEeccccccccccccceeecCHHH
Confidence            456789999995 99999999999999999999999988755432    23433  33344321             233


Q ss_pred             HHHHHHHHHHHcCCcccEEEECCCCC
Q 024230           84 RQTLINTVSSLFNGKLNIFVNNVGTS  109 (270)
Q Consensus        84 ~~~~~~~i~~~~~~~id~li~~ag~~  109 (270)
                      .+...+.+.++. .+.|++|+++-+.
T Consensus       234 ~~~~~~~~~e~~-~~~DIVI~Talip  258 (511)
T TIGR00561       234 IAAEMELFAAQA-KEVDIIITTALIP  258 (511)
T ss_pred             HHHHHHHHHHHh-CCCCEEEECcccC
Confidence            333333344444 6799999999543

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.75  E-value=0.0043  Score=57.38  Aligned_cols=49  Identities=18%  Similarity=0.247  Sum_probs=42.2

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHL   64 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~   64 (270)
                      ..++++|+++|+|+ ||+|++++..|++.|++|.+++|+.++.+++.+.+
T Consensus       327 ~~~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~  375 (477)
T PRK09310        327 NIPLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRC  375 (477)
T ss_pred             CCCcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence            45788999999996 79999999999999999999999988776665543

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.74  E-value=0.017  Score=48.57  Aligned_cols=82  Identities=17%  Similarity=0.210  Sum_probs=54.1

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCCh-------------------hHHHHHHHHHHhcC--CeEEE
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTE-------------------TELNECIHHLQMKG--LKVTG   73 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~-------------------~~~~~~~~~~~~~~--~~~~~   73 (270)
                      -.|++++|+|.|+ ||+|..+++.|+..|. ++.++|.+.                   .+.+.+.+.+++..  .++..
T Consensus        28 ~~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~  106 (245)
T PRK05690         28 EKLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIET  106 (245)
T ss_pred             HHhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEE
Confidence            4678899999998 9999999999999997 688887642                   22333344454433  34455


Q ss_pred             EEccCCCHHHHHHHHHHHHHHcCCcccEEEECCC
Q 024230           74 SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVG  107 (270)
Q Consensus        74 ~~~D~~~~~~~~~~~~~i~~~~~~~id~li~~ag  107 (270)
                      +...++ ++.+.+++        ...|++|.+..
T Consensus       107 ~~~~i~-~~~~~~~~--------~~~DiVi~~~D  131 (245)
T PRK05690        107 INARLD-DDELAALI--------AGHDLVLDCTD  131 (245)
T ss_pred             EeccCC-HHHHHHHH--------hcCCEEEecCC
Confidence            544443 22333332        46788888864

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.73  E-value=0.00048  Score=49.88  Aligned_cols=38  Identities=29%  Similarity=0.292  Sum_probs=33.0

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTE   54 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~   54 (270)
                      ++++||++||+|+ |.+|..-++.|++.|++|.+++...
T Consensus         3 l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    3 LDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             E--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            5899999999999 8999999999999999999999885

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.70  E-value=0.0084  Score=55.01  Aligned_cols=81  Identities=22%  Similarity=0.217  Sum_probs=55.3

Q ss_pred             CCCCCEEEEecCC----------------CcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCC
Q 024230           17 SLQGMTALVTGGT----------------KGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSS   80 (270)
Q Consensus        17 ~l~gk~vlItG~s----------------~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~   80 (270)
                      +|+||+||||+|.                |-.|.+||+.+..+|++|.+++-... +       . ....+..+  .+.+
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~-------~-~p~~v~~i--~V~t  321 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-L-------A-DPQGVKVI--HVES  321 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-C-------C-CCCCceEE--EecC
Confidence            6999999999985                88999999999999999999863221 1       1 11223333  3334


Q ss_pred             HHHHHHHHHHHHHHcCCcccEEEECCCCCCCCC
Q 024230           81 RPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKP  113 (270)
Q Consensus        81 ~~~~~~~~~~i~~~~~~~id~li~~ag~~~~~~  113 (270)
                      .+++.   +.+.+.+  +.|++|++|++....+
T Consensus       322 a~eM~---~av~~~~--~~Di~I~aAAVaDyrp  349 (475)
T PRK13982        322 ARQML---AAVEAAL--PADIAIFAAAVADWRV  349 (475)
T ss_pred             HHHHH---HHHHhhC--CCCEEEEeccccceee
Confidence            44544   4444444  3799999999865443

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.69  E-value=0.0088  Score=46.78  Aligned_cols=36  Identities=22%  Similarity=0.331  Sum_probs=32.6

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeC
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSR   52 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r   52 (270)
                      .+|+||+|+|.|| |.+|...++.|.+.|++|.+++.
T Consensus         9 l~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp   44 (157)
T PRK06719          9 FNLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSP   44 (157)
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcC
Confidence            5899999999997 67999999999999999998853

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.67  E-value=0.0046  Score=52.95  Aligned_cols=40  Identities=25%  Similarity=0.265  Sum_probs=36.9

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTE   54 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~   54 (270)
                      ..+++||+++|+|.+.-+|+.++..|.++|++|.++.++.
T Consensus       153 ~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t  192 (286)
T PRK14175        153 DIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS  192 (286)
T ss_pred             CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc
Confidence            4689999999999999999999999999999999988754

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.60  E-value=0.022  Score=42.57  Aligned_cols=76  Identities=14%  Similarity=0.219  Sum_probs=54.6

Q ss_pred             EEEEecCCCcHHHHHHHHHHH-CCCeE-EEeeCCh----------------------hHHHHHHHHHHhcCCeEEEEEcc
Q 024230           22 TALVTGGTKGLGLAVVEELSM-LGATV-HTCSRTE----------------------TELNECIHHLQMKGLKVTGSVCD   77 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~-~G~~v-~l~~r~~----------------------~~~~~~~~~~~~~~~~~~~~~~D   77 (270)
                      +|+|.|.+|.+|+.+++.+.+ .|.++ ..++|++                      +.++++.+.     .+   +..|
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~-----~D---VvID   73 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE-----AD---VVID   73 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH------S---EEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc-----CC---EEEE
Confidence            689999999999999999999 67774 4567766                      233333332     22   5579


Q ss_pred             CCCHHHHHHHHHHHHHHcCCcccEEEECCCC
Q 024230           78 VSSRPQRQTLINTVSSLFNGKLNIFVNNVGT  108 (270)
Q Consensus        78 ~~~~~~~~~~~~~i~~~~~~~id~li~~ag~  108 (270)
                      ++.++.+.+.++.+.+.   ++.+++-..|.
T Consensus        74 fT~p~~~~~~~~~~~~~---g~~~ViGTTG~  101 (124)
T PF01113_consen   74 FTNPDAVYDNLEYALKH---GVPLVIGTTGF  101 (124)
T ss_dssp             ES-HHHHHHHHHHHHHH---T-EEEEE-SSS
T ss_pred             cCChHHhHHHHHHHHhC---CCCEEEECCCC
Confidence            99999999988888775   67788888886

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=96.59  E-value=0.0081  Score=48.10  Aligned_cols=44  Identities=16%  Similarity=0.260  Sum_probs=36.5

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHh
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQM   66 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~   66 (270)
                      +|.|.|+ |.+|..+|..|+..|++|++++++++.+++..+.++.
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~   44 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIER   44 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHH
Confidence            4778888 9999999999999999999999999988776666554

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.59  E-value=0.018  Score=51.62  Aligned_cols=82  Identities=18%  Similarity=0.303  Sum_probs=56.0

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCC-------------------hhHHHHHHHHHHhcC--CeEEEE
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRT-------------------ETELNECIHHLQMKG--LKVTGS   74 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~-------------------~~~~~~~~~~~~~~~--~~~~~~   74 (270)
                      .|++++|+|.|+ ||+|..+++.|+..|. ++.+++++                   ..+.+.+.+.+.+..  .++..+
T Consensus       132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  210 (376)
T PRK08762        132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAV  210 (376)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence            578899999965 8999999999999998 69999887                   345555566665543  334444


Q ss_pred             EccCCCHHHHHHHHHHHHHHcCCcccEEEECCCC
Q 024230           75 VCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGT  108 (270)
Q Consensus        75 ~~D~~~~~~~~~~~~~i~~~~~~~id~li~~ag~  108 (270)
                      ...+.+ +++.+++        ...|++|++...
T Consensus       211 ~~~~~~-~~~~~~~--------~~~D~Vv~~~d~  235 (376)
T PRK08762        211 QERVTS-DNVEALL--------QDVDVVVDGADN  235 (376)
T ss_pred             eccCCh-HHHHHHH--------hCCCEEEECCCC
Confidence            433432 3333333        467899888763

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=96.58  E-value=0.0044  Score=48.51  Aligned_cols=45  Identities=27%  Similarity=0.358  Sum_probs=35.0

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELN   58 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~   58 (270)
                      +..+++||+++|.|.+.-+|+.++..|.++|+.|.++....+.++
T Consensus        30 ~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~   74 (160)
T PF02882_consen   30 YGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQ   74 (160)
T ss_dssp             TT-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHH
T ss_pred             cCCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCccc
Confidence            456899999999999999999999999999999999876654443

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.58  E-value=0.021  Score=44.90  Aligned_cols=85  Identities=12%  Similarity=0.070  Sum_probs=56.9

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHH-------HhcCCeEEEEEccCCCHHHHHHHHHH--H
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHL-------QMKGLKVTGSVCDVSSRPQRQTLINT--V   91 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~-------~~~~~~~~~~~~D~~~~~~~~~~~~~--i   91 (270)
                      ++|-+.|- |..|..+|+.|+++|++|.+++|++++.+++.++-       .+.-.+..++..-+.+.+++++++..  +
T Consensus         2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i   80 (163)
T PF03446_consen    2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENI   80 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTH
T ss_pred             CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHH
Confidence            46788887 79999999999999999999999998877765321       00001234556677888888888877  6


Q ss_pred             HHHcCCcccEEEECCC
Q 024230           92 SSLFNGKLNIFVNNVG  107 (270)
Q Consensus        92 ~~~~~~~id~li~~ag  107 (270)
                      .... .+=+++|++.-
T Consensus        81 ~~~l-~~g~iiid~sT   95 (163)
T PF03446_consen   81 LAGL-RPGKIIIDMST   95 (163)
T ss_dssp             GGGS--TTEEEEE-SS
T ss_pred             hhcc-ccceEEEecCC
Confidence            5544 34455665554

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.56  E-value=0.014  Score=50.27  Aligned_cols=78  Identities=21%  Similarity=0.428  Sum_probs=52.9

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC-C
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN-G   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~-~   97 (270)
                      +|++++|+|+++++|..++..+...|++|+++.++++..+.+ .   ..+.+..   .+..+.+.    ...+..... +
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~---~~g~~~~---~~~~~~~~----~~~~~~~~~~~  207 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-E---ALGADIA---INYREEDF----VEVVKAETGGK  207 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-H---HcCCcEE---EecCchhH----HHHHHHHcCCC
Confidence            578999999999999999999999999999999887765432 2   2332211   22222222    222322222 3


Q ss_pred             cccEEEECCC
Q 024230           98 KLNIFVNNVG  107 (270)
Q Consensus        98 ~id~li~~ag  107 (270)
                      .+|.+++++|
T Consensus       208 ~~d~~i~~~~  217 (325)
T TIGR02824       208 GVDVILDIVG  217 (325)
T ss_pred             CeEEEEECCc
Confidence            6999999987

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.56  E-value=0.0042  Score=53.53  Aligned_cols=46  Identities=20%  Similarity=0.200  Sum_probs=40.2

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNE   59 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~   59 (270)
                      +..+++||.|.|.|.++-+|+.+|..|.++|+.|.++.+..+.+++
T Consensus       153 ~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e  198 (301)
T PRK14194        153 TCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKA  198 (301)
T ss_pred             hCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHH
Confidence            3569999999999999999999999999999999999776654433

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=96.55  E-value=0.012  Score=51.37  Aligned_cols=116  Identities=13%  Similarity=0.143  Sum_probs=67.8

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCC--eEEEeeCCh--hHHHHHHHHHHh----cCCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTE--TELNECIHHLQM----KGLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~--~v~l~~r~~--~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      ++|.|+|++|.+|..++..++..|.  +|+++++++  +.++....++.+    .+...   ....+.  +.++ +    
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~---~i~~~~--d~~~-l----   70 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDA---EIKISS--DLSD-V----   70 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCc---EEEECC--CHHH-h----
Confidence            4789999999999999999999996  499999955  443333322221    11111   111111  1111 2    


Q ss_pred             HHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcc
Q 024230           93 SLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSAL  159 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~  159 (270)
                          ...|++|.++|....   ...+.   .+.++.|+.-...+.+.+.++.   ..+.+|++++..
T Consensus        71 ----~~aDiViitag~p~~---~~~~r---~dl~~~n~~i~~~~~~~i~~~~---~~~~viv~~npv  124 (309)
T cd05294          71 ----AGSDIVIITAGVPRK---EGMSR---LDLAKKNAKIVKKYAKQIAEFA---PDTKILVVTNPV  124 (309)
T ss_pred             ----CCCCEEEEecCCCCC---CCCCH---HHHHHHHHHHHHHHHHHHHHHC---CCeEEEEeCCch
Confidence                578999999998532   12232   2345556555555555443321   346777777643

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.51  E-value=0.027  Score=49.02  Aligned_cols=80  Identities=16%  Similarity=0.286  Sum_probs=53.1

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      .|.+++|.|+++++|..++..+...|++|+.+++++++.+.+.+.   .+.. .+  .|..+.+.    .+.+....+++
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~---~g~~-~~--~~~~~~~~----~~~v~~~~~~~  214 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEE---LGFD-AA--INYKTPDL----AEALKEAAPDG  214 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhh---cCCc-eE--EecCChhH----HHHHHHhccCC
Confidence            578999999999999999999999999999999887765543221   2322 11  12222222    22222222257


Q ss_pred             ccEEEECCCC
Q 024230           99 LNIFVNNVGT  108 (270)
Q Consensus        99 id~li~~ag~  108 (270)
                      +|+++++.|.
T Consensus       215 ~d~vi~~~g~  224 (329)
T cd05288         215 IDVYFDNVGG  224 (329)
T ss_pred             ceEEEEcchH
Confidence            9999998873

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.50  E-value=0.0089  Score=49.38  Aligned_cols=42  Identities=24%  Similarity=0.264  Sum_probs=37.5

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHH
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHH   63 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~   63 (270)
                      +|.|+||+|.+|.++++.|++.|++|.+++|++++.+++.+.
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~   43 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK   43 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence            689999999999999999999999999999998887666553

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=96.48  E-value=0.016  Score=45.29  Aligned_cols=74  Identities=22%  Similarity=0.336  Sum_probs=46.0

Q ss_pred             cccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           13 QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        13 ~~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      .....+.||+++|.| -|.+|+.+|+.|...|++|+++..++-..-+  ..+  .|-++.       .   +++++    
T Consensus        16 ~t~~~l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~alq--A~~--dGf~v~-------~---~~~a~----   76 (162)
T PF00670_consen   16 ATNLMLAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRALQ--AAM--DGFEVM-------T---LEEAL----   76 (162)
T ss_dssp             HH-S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHH--HHH--TT-EEE-----------HHHHT----
T ss_pred             cCceeeCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHHHH--hhh--cCcEec-------C---HHHHH----
Confidence            446789999999997 4799999999999999999999998865432  222  232221       1   22333    


Q ss_pred             HHcCCcccEEEECCCCC
Q 024230           93 SLFNGKLNIFVNNVGTS  109 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~  109 (270)
                          ...|++|.+.|..
T Consensus        77 ----~~adi~vtaTG~~   89 (162)
T PF00670_consen   77 ----RDADIFVTATGNK   89 (162)
T ss_dssp             ----TT-SEEEE-SSSS
T ss_pred             ----hhCCEEEECCCCc
Confidence                5679999998864

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=96.46  E-value=0.047  Score=44.41  Aligned_cols=74  Identities=18%  Similarity=0.136  Sum_probs=48.2

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhH-HHHHHHHHHhc-----------CCeEEEEEccCCCHHHHHHHHH
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETE-LNECIHHLQMK-----------GLKVTGSVCDVSSRPQRQTLIN   89 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~-~~~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~   89 (270)
                      ..+..+|+|-||.+++++|++.|++|++-+|+.++ ++...+.+...           ..++.++..-.   +.+..+..
T Consensus         2 ~~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP~---~a~~~v~~   78 (211)
T COG2085           2 MIIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVPF---EAIPDVLA   78 (211)
T ss_pred             cEEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEeccH---HHHHhHHH
Confidence            35667788999999999999999999998666654 44444333211           23344444433   34566777


Q ss_pred             HHHHHcCCc
Q 024230           90 TVSSLFNGK   98 (270)
Q Consensus        90 ~i~~~~~~~   98 (270)
                      ++.+.++++
T Consensus        79 ~l~~~~~~K   87 (211)
T COG2085          79 ELRDALGGK   87 (211)
T ss_pred             HHHHHhCCe
Confidence            777766434

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.44  E-value=0.019  Score=47.66  Aligned_cols=76  Identities=21%  Similarity=0.270  Sum_probs=57.0

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      |.++|.|+ |-+|.++|+.|.++|++|++++++++..++....-    ...+.+..|-++++-++++=      . ...|
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~----~~~~~v~gd~t~~~~L~~ag------i-~~aD   68 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLADE----LDTHVVIGDATDEDVLEEAG------I-DDAD   68 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhh----cceEEEEecCCCHHHHHhcC------C-CcCC
Confidence            34556555 78999999999999999999999999876633311    25778889999987665552      0 4688


Q ss_pred             EEEECCCC
Q 024230          101 IFVNNVGT  108 (270)
Q Consensus       101 ~li~~ag~  108 (270)
                      +++-..+.
T Consensus        69 ~vva~t~~   76 (225)
T COG0569          69 AVVAATGN   76 (225)
T ss_pred             EEEEeeCC
Confidence            88887774

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.42  E-value=0.034  Score=45.71  Aligned_cols=37  Identities=19%  Similarity=0.254  Sum_probs=32.9

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCC
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRT   53 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~   53 (270)
                      ..|+.++|+|.|+ ||+|..+++.|++.|. ++.++|.+
T Consensus        24 ~~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         24 EKLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             HHHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            4678899999995 8999999999999997 49999887

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.40  E-value=0.038  Score=45.02  Aligned_cols=38  Identities=24%  Similarity=0.219  Sum_probs=33.9

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCC
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRT   53 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~   53 (270)
                      .-.|+.++|+|.|+ ||+|..+|..|++.|. +++++|++
T Consensus        16 q~~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        16 VQKLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HHHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            34678899999998 7899999999999998 69999887

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.39  E-value=0.023  Score=41.63  Aligned_cols=71  Identities=18%  Similarity=0.169  Sum_probs=52.9

Q ss_pred             EEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcccEE
Q 024230           23 ALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIF  102 (270)
Q Consensus        23 vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~l  102 (270)
                      |+|.|. +.+|+.+++.|.+.+.+|++++++++..+..    ...+  +.++..|.++++.++++-      . .+.+.+
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~----~~~~--~~~i~gd~~~~~~l~~a~------i-~~a~~v   66 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEEL----REEG--VEVIYGDATDPEVLERAG------I-EKADAV   66 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHH----HHTT--SEEEES-TTSHHHHHHTT------G-GCESEE
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHH----Hhcc--cccccccchhhhHHhhcC------c-cccCEE
Confidence            567777 5899999999999877999999998875543    3333  667889999988766653      1 467888


Q ss_pred             EECCC
Q 024230          103 VNNVG  107 (270)
Q Consensus       103 i~~ag  107 (270)
                      +....
T Consensus        67 v~~~~   71 (116)
T PF02254_consen   67 VILTD   71 (116)
T ss_dssp             EEESS
T ss_pred             EEccC
Confidence            87765

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.39  E-value=0.04  Score=45.81  Aligned_cols=83  Identities=16%  Similarity=0.244  Sum_probs=55.2

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCCh-------------------hHHHHHHHHHHhcC--CeEEE
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTE-------------------TELNECIHHLQMKG--LKVTG   73 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~-------------------~~~~~~~~~~~~~~--~~~~~   73 (270)
                      -.|++++|+|.| .||+|..+|+.|+..|. ++.++|.+.                   .+.+.+.+.+++..  .++..
T Consensus        17 ~~L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~   95 (228)
T cd00757          17 EKLKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEA   95 (228)
T ss_pred             HHHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEE
Confidence            368889999998 68999999999999997 688886532                   23344555555543  34555


Q ss_pred             EEccCCCHHHHHHHHHHHHHHcCCcccEEEECCCC
Q 024230           74 SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGT  108 (270)
Q Consensus        74 ~~~D~~~~~~~~~~~~~i~~~~~~~id~li~~ag~  108 (270)
                      +..+++ .+++.+++        .+.|++|.|...
T Consensus        96 ~~~~i~-~~~~~~~~--------~~~DvVi~~~d~  121 (228)
T cd00757          96 YNERLD-AENAEELI--------AGYDLVLDCTDN  121 (228)
T ss_pred             ecceeC-HHHHHHHH--------hCCCEEEEcCCC
Confidence            554553 33333333        467888888763

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.37  E-value=0.024  Score=48.93  Aligned_cols=79  Identities=19%  Similarity=0.250  Sum_probs=52.6

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC-C
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN-G   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~-~   97 (270)
                      .+++++|+|+++++|..++..+...|++|+.++++.++.+.+ .+   .+.. .++  +.... +....+   ..... .
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~---~g~~-~~~--~~~~~-~~~~~~---~~~~~~~  212 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL-LA---LGAA-HVI--VTDEE-DLVAEV---LRITGGK  212 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HH---cCCC-EEE--ecCCc-cHHHHH---HHHhCCC
Confidence            578999999999999999999999999999999887765543 22   2322 122  22221 222222   22221 3


Q ss_pred             cccEEEECCCC
Q 024230           98 KLNIFVNNVGT  108 (270)
Q Consensus        98 ~id~li~~ag~  108 (270)
                      .+|.++++.+.
T Consensus       213 ~~d~vi~~~~~  223 (328)
T cd08268         213 GVDVVFDPVGG  223 (328)
T ss_pred             CceEEEECCch
Confidence            69999999873

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.36  E-value=0.01  Score=50.77  Aligned_cols=43  Identities=16%  Similarity=0.322  Sum_probs=37.5

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETE   56 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~   56 (270)
                      +..+++||+|+|.|.|.-+|+.+|..|.++|+.|.++....+.
T Consensus       151 ~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~  193 (285)
T PRK14191        151 YHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTKD  193 (285)
T ss_pred             hCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHH
Confidence            4568999999999999999999999999999999887554433

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.36  E-value=0.036  Score=49.35  Aligned_cols=38  Identities=24%  Similarity=0.247  Sum_probs=33.2

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCCh
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTE   54 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~   54 (270)
                      -.|++++|+|.|+ ||+|..+++.|+..|. ++.+++.+.
T Consensus        24 ~~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~   62 (355)
T PRK05597         24 QSLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDT   62 (355)
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            4688899999988 8999999999999997 688887753

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=96.35  E-value=0.028  Score=49.01  Aligned_cols=116  Identities=11%  Similarity=0.098  Sum_probs=65.9

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCC--eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      +|.|+|++|.+|.++|..|+..|.  +++|+++++..  ....++........+..+.  +.++..+.       + ..-
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~--g~a~DL~~~~~~~~i~~~~--~~~~~~~~-------~-~da   68 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAA--GVAADLSHIPTAASVKGFS--GEEGLENA-------L-KGA   68 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCc--EEEchhhcCCcCceEEEec--CCCchHHH-------c-CCC
Confidence            478999999999999999999985  79999997721  1122222211111111100  00111112       2 578


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCcc
Q 024230          100 NIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSAL  159 (270)
Q Consensus       100 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~  159 (270)
                      |++|.++|.... +  ..+.   .+.+..|+.    +++.+.+.+.+.. .+.+|++|-..
T Consensus        69 DivvitaG~~~~-~--g~~R---~dll~~N~~----I~~~i~~~i~~~~p~~iiivvsNPv  119 (312)
T TIGR01772        69 DVVVIPAGVPRK-P--GMTR---DDLFNVNAG----IVKDLVAAVAESCPKAMILVITNPV  119 (312)
T ss_pred             CEEEEeCCCCCC-C--CccH---HHHHHHhHH----HHHHHHHHHHHhCCCeEEEEecCch
Confidence            999999997432 2  2222   345667776    4455555555554 44556555443

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=96.32  E-value=0.024  Score=49.76  Aligned_cols=78  Identities=21%  Similarity=0.233  Sum_probs=52.3

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCe-EEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGAT-VHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~~-v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      ..|++++|+|+ |++|..++..+...|++ |+++++++++.+.+ ++   .|...   ..|..+.+ .+++    .+..+
T Consensus       162 ~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~---~ga~~---~i~~~~~~-~~~~----~~~~~  228 (339)
T cd08239         162 SGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KA---LGADF---VINSGQDD-VQEI----RELTS  228 (339)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HH---hCCCE---EEcCCcch-HHHH----HHHhC
Confidence            35899999975 89999999999999998 99998888776443 32   34322   12333332 2222    22222


Q ss_pred             -CcccEEEECCCC
Q 024230           97 -GKLNIFVNNVGT  108 (270)
Q Consensus        97 -~~id~li~~ag~  108 (270)
                       ..+|+++.+.|.
T Consensus       229 ~~~~d~vid~~g~  241 (339)
T cd08239         229 GAGADVAIECSGN  241 (339)
T ss_pred             CCCCCEEEECCCC
Confidence             369999999884

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.30  E-value=0.024  Score=56.86  Aligned_cols=78  Identities=13%  Similarity=0.159  Sum_probs=61.2

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCC-Ce-------------EEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHH
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLG-AT-------------VHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQ   83 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G-~~-------------v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   83 (270)
                      -+.|+|+|.|+ |.+|+..++.|++.. ++             |.+++++.+..+++.+..    ..+..+.+|++|.++
T Consensus       567 ~~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~----~~~~~v~lDv~D~e~  641 (1042)
T PLN02819        567 KKSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI----ENAEAVQLDVSDSES  641 (1042)
T ss_pred             ccCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc----CCCceEEeecCCHHH
Confidence            35789999997 999999999999863 33             888899988777665543    135678899999988


Q ss_pred             HHHHHHHHHHHcCCcccEEEECCCC
Q 024230           84 RQTLINTVSSLFNGKLNIFVNNVGT  108 (270)
Q Consensus        84 ~~~~~~~i~~~~~~~id~li~~ag~  108 (270)
                      +.+++        .++|++|++...
T Consensus       642 L~~~v--------~~~DaVIsalP~  658 (1042)
T PLN02819        642 LLKYV--------SQVDVVISLLPA  658 (1042)
T ss_pred             HHHhh--------cCCCEEEECCCc
Confidence            77776        458999999865

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.26  E-value=0.035  Score=48.97  Aligned_cols=77  Identities=18%  Similarity=0.249  Sum_probs=52.0

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      ..|++|+|+|+ |++|...+..+...|+ +|+++++++++++.+ +   +.|....   .|..+ +++.+    +.... 
T Consensus       168 ~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a-~---~lGa~~v---i~~~~-~~~~~----~~~~~-  233 (343)
T PRK09880        168 LQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA-R---EMGADKL---VNPQN-DDLDH----YKAEK-  233 (343)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH-H---HcCCcEE---ecCCc-ccHHH----HhccC-
Confidence            46899999986 8999999988888898 588899988776533 2   3343322   23333 22222    22222 


Q ss_pred             CcccEEEECCCC
Q 024230           97 GKLNIFVNNVGT  108 (270)
Q Consensus        97 ~~id~li~~ag~  108 (270)
                      +.+|+++.+.|.
T Consensus       234 g~~D~vid~~G~  245 (343)
T PRK09880        234 GYFDVSFEVSGH  245 (343)
T ss_pred             CCCCEEEECCCC
Confidence            469999999984

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=96.25  E-value=0.19  Score=44.16  Aligned_cols=120  Identities=9%  Similarity=0.076  Sum_probs=69.7

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHh----cCCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQM----KGLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      ++.++|.|+| +|.+|..+|..++..|. .|++++.+++..+.....+..    .+....+..  .+|   .+ .+    
T Consensus         4 ~~~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d---~~-~l----   72 (321)
T PTZ00082          4 IKRRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNN---YE-DI----   72 (321)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCC---HH-Hh----
Confidence            3457899999 58899999999999995 899999998864322221211    111122111  012   11 11    


Q ss_pred             HHcCCcccEEEECCCCCCCCCCC--CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCcc
Q 024230           93 SLFNGKLNIFVNNVGTSVLKPTL--EYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSAL  159 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~  159 (270)
                          ..-|++|+++|........  +.+.   .+.+..|+    .+.+.+.+.|.+.. .+.++++|-..
T Consensus        73 ----~~aDiVI~tag~~~~~~~~~~~~~r---~~~l~~n~----~i~~~i~~~i~~~~p~a~~iv~sNP~  131 (321)
T PTZ00082         73 ----AGSDVVIVTAGLTKRPGKSDKEWNR---DDLLPLNA----KIMDEVAEGIKKYCPNAFVIVITNPL  131 (321)
T ss_pred             ----CCCCEEEECCCCCCCCCCCcCCCCH---HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecCcH
Confidence                5789999999985422111  1233   34455554    34556666666554 34566666443

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=96.22  E-value=0.027  Score=51.07  Aligned_cols=42  Identities=21%  Similarity=0.213  Sum_probs=37.5

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETEL   57 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~   57 (270)
                      ...+.||+++|+|. |.||+.+|..+...|++|+++++++.+.
T Consensus       207 ~~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra  248 (425)
T PRK05476        207 NVLIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICA  248 (425)
T ss_pred             cCCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhh
Confidence            34689999999997 6899999999999999999999987664

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.20  E-value=0.34  Score=40.67  Aligned_cols=79  Identities=23%  Similarity=0.364  Sum_probs=57.3

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC-C
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN-G   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~-~   97 (270)
                      .|.+||+--++||+|..+++.+...|+.++.+....++.+..    .++|.. +.  .|-+.    +++++++.+... .
T Consensus       146 pGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~a----kenG~~-h~--I~y~~----eD~v~~V~kiTngK  214 (336)
T KOG1197|consen  146 PGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIA----KENGAE-HP--IDYST----EDYVDEVKKITNGK  214 (336)
T ss_pred             CCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHH----HhcCCc-ce--eeccc----hhHHHHHHhccCCC
Confidence            578999999999999999999999999999988877765543    334433 22  23333    335666666543 4


Q ss_pred             cccEEEECCCC
Q 024230           98 KLNIFVNNVGT  108 (270)
Q Consensus        98 ~id~li~~ag~  108 (270)
                      .+|+++...|.
T Consensus       215 GVd~vyDsvG~  225 (336)
T KOG1197|consen  215 GVDAVYDSVGK  225 (336)
T ss_pred             Cceeeeccccc
Confidence            69998888775

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.18  E-value=0.058  Score=44.13  Aligned_cols=39  Identities=26%  Similarity=0.326  Sum_probs=34.2

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChh
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTET   55 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~   55 (270)
                      .+|+||+++|.|| |.+|..-++.|++.|++|.+++....
T Consensus         5 l~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~   43 (205)
T TIGR01470         5 ANLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELE   43 (205)
T ss_pred             EEcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence            4799999999997 67899999999999999999987543

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PLN02602 lactate dehydrogenase

Probab=96.18  E-value=0.058  Score=47.81  Aligned_cols=112  Identities=13%  Similarity=0.185  Sum_probs=69.1

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCC--eEEEeeCChhHHHHHHHHHHhcC---CeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTETELNECIHHLQMKG---LKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      ++|.|+|+ |.+|.++|..++..|.  +++|++.+++.++....+++...   .... +..+ .+   ..+ +       
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~-i~~~-~d---y~~-~-------  103 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTK-ILAS-TD---YAV-T-------  103 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCE-EEeC-CC---HHH-h-------
Confidence            69999996 9999999999999985  69999999887766665555421   1111 1110 11   111 1       


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecC
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSS  157 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss  157 (270)
                       ..-|++|.+||.... +  ..+..   +.+..|+.    +++.+.+.+.+.. .+.+|+++-
T Consensus       104 -~daDiVVitAG~~~k-~--g~tR~---dll~~N~~----I~~~i~~~I~~~~p~~ivivvtN  155 (350)
T PLN02602        104 -AGSDLCIVTAGARQI-P--GESRL---NLLQRNVA----LFRKIIPELAKYSPDTILLIVSN  155 (350)
T ss_pred             -CCCCEEEECCCCCCC-c--CCCHH---HHHHHHHH----HHHHHHHHHHHHCCCeEEEEecC
Confidence             578999999998532 2  23333   33455544    3444444445443 456666664

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.17  E-value=0.059  Score=45.21  Aligned_cols=38  Identities=24%  Similarity=0.282  Sum_probs=32.2

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCCh
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTE   54 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~   54 (270)
                      ..|++++|+|.|+ ||+|..+++.|+..|. ++.++|.+.
T Consensus        20 ~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~   58 (240)
T TIGR02355        20 EALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDT   58 (240)
T ss_pred             HHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence            4688899999976 6999999999999996 688887754

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=96.16  E-value=0.033  Score=48.32  Aligned_cols=79  Identities=15%  Similarity=0.173  Sum_probs=53.2

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC-C
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN-G   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~-~   97 (270)
                      .|.+++|.|+++++|.+++......|++++.+.++.++.+.+.+    .+... ++  +..+ ++.   .+++.+..+ .
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~----~g~~~-~~--~~~~-~~~---~~~i~~~~~~~  207 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA----LGIGP-VV--STEQ-PGW---QDKVREAAGGA  207 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh----cCCCE-EE--cCCC-chH---HHHHHHHhCCC
Confidence            57899999999999999999999999999999888776544432    23322 11  2222 222   222333332 3


Q ss_pred             cccEEEECCCC
Q 024230           98 KLNIFVNNVGT  108 (270)
Q Consensus        98 ~id~li~~ag~  108 (270)
                      .+|+++.+.|.
T Consensus       208 ~~d~v~d~~g~  218 (324)
T cd08292         208 PISVALDSVGG  218 (324)
T ss_pred             CCcEEEECCCC
Confidence            69999998874

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.16  E-value=0.016  Score=46.20  Aligned_cols=45  Identities=24%  Similarity=0.257  Sum_probs=38.4

Q ss_pred             cccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHH
Q 024230           13 QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELN   58 (270)
Q Consensus        13 ~~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~   58 (270)
                      ....++.||++.|.|. |.||+++|+.+...|.+|+.++|......
T Consensus        29 ~~~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~   73 (178)
T PF02826_consen   29 FPGRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEE   73 (178)
T ss_dssp             TTBS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHH
T ss_pred             CCccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhh
Confidence            4456999999999976 89999999999999999999999988654

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=96.16  E-value=0.079  Score=48.37  Aligned_cols=112  Identities=11%  Similarity=0.062  Sum_probs=72.3

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHC-------CC--eEEEeeCChhHHHHHHHHHHhcC----CeEEEEEccCCCHHHHHHH
Q 024230           21 MTALVTGGTKGLGLAVVEELSML-------GA--TVHTCSRTETELNECIHHLQMKG----LKVTGSVCDVSSRPQRQTL   87 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~-------G~--~v~l~~r~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~   87 (270)
                      -+|.|+|++|.+|.++|..++..       |.  ++++++++++.++....+++...    .++. +..  .+.    +.
T Consensus       101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~-i~~--~~y----e~  173 (444)
T PLN00112        101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVS-IGI--DPY----EV  173 (444)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceE-Eec--CCH----HH
Confidence            47999999999999999999998       65  79999999998877777666532    1111 111  111    11


Q ss_pred             HHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh--cCCcEEEEecC
Q 024230           88 INTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRA--SGAASIVLMSS  157 (270)
Q Consensus        88 ~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~--~~~g~ii~iss  157 (270)
                             + ..-|++|..||... ++  ..+.   .+.++.|+.=.-.+    .+.+.+  ...+.+|++|-
T Consensus       174 -------~-kdaDiVVitAG~pr-kp--G~tR---~dLl~~N~~I~k~i----~~~I~~~a~p~~ivIVVsN  227 (444)
T PLN00112        174 -------F-QDAEWALLIGAKPR-GP--GMER---ADLLDINGQIFAEQ----GKALNEVASRNVKVIVVGN  227 (444)
T ss_pred             -------h-CcCCEEEECCCCCC-CC--CCCH---HHHHHHHHHHHHHH----HHHHHHhcCCCeEEEEcCC
Confidence                   1 57899999999742 22  2333   34566666544444    444455  33566666664

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=96.15  E-value=0.04  Score=47.72  Aligned_cols=79  Identities=24%  Similarity=0.314  Sum_probs=53.6

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC-C
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN-G   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~-~   97 (270)
                      .+.+++|+|+++++|..++..+...|++|+.++++++..+.+ ++   .+... +  .|..+.+..+.    +....+ .
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~---~g~~~-~--~~~~~~~~~~~----~~~~~~~~  210 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RA---LGADV-A--VDYTRPDWPDQ----VREALGGG  210 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HH---cCCCE-E--EecCCccHHHH----HHHHcCCC
Confidence            478999999999999999999999999999999888775543 22   33322 1  23333222222    222222 3


Q ss_pred             cccEEEECCCC
Q 024230           98 KLNIFVNNVGT  108 (270)
Q Consensus        98 ~id~li~~ag~  108 (270)
                      .+|+++++.|.
T Consensus       211 ~~d~vl~~~g~  221 (324)
T cd08244         211 GVTVVLDGVGG  221 (324)
T ss_pred             CceEEEECCCh
Confidence            69999999873

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=96.12  E-value=0.035  Score=50.88  Aligned_cols=42  Identities=21%  Similarity=0.204  Sum_probs=37.3

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETEL   57 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~   57 (270)
                      +..+.||+++|.|.+ .||+.+|+.+...|++|+++++++...
T Consensus       249 ~~~LaGKtVgVIG~G-~IGr~vA~rL~a~Ga~ViV~e~dp~~a  290 (476)
T PTZ00075        249 DVMIAGKTVVVCGYG-DVGKGCAQALRGFGARVVVTEIDPICA  290 (476)
T ss_pred             CCCcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchhH
Confidence            568999999999976 599999999999999999998886654

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=96.10  E-value=0.1  Score=45.44  Aligned_cols=117  Identities=12%  Similarity=0.080  Sum_probs=68.0

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCC--eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      +|.|+|++|.+|.++|..++..|.  +++|++.+  ..+....+++..........+.  ..+++.+.+        ...
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i~~~~--~~~~~y~~~--------~da   69 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKVTGYL--GPEELKKAL--------KGA   69 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceEEEec--CCCchHHhc--------CCC
Confidence            789999999999999999999984  79999987  3222223333221111111110  101111122        578


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcc
Q 024230          100 NIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSAL  159 (270)
Q Consensus       100 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~  159 (270)
                      |++|.+||.... +  ..+.   .+.++.|..-...+.+.+.++   ...+.+|++|-..
T Consensus        70 DivvitaG~~~k-~--g~tR---~dll~~N~~i~~~i~~~i~~~---~p~a~vivvtNPv  120 (310)
T cd01337          70 DVVVIPAGVPRK-P--GMTR---DDLFNINAGIVRDLATAVAKA---CPKALILIISNPV  120 (310)
T ss_pred             CEEEEeCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCeEEEEccCch
Confidence            999999998532 2  2333   345777776666665555433   2245666666554

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.10  E-value=0.066  Score=40.54  Aligned_cols=78  Identities=17%  Similarity=0.276  Sum_probs=54.4

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCCh-------------------hHHHHHHHHHHhc--CCeEEEEEcc
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTE-------------------TELNECIHHLQMK--GLKVTGSVCD   77 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~-------------------~~~~~~~~~~~~~--~~~~~~~~~D   77 (270)
                      .++|+|.|+ |++|..+++.|+..|. ++.++|.+.                   .+.+.+.+.+++.  ..++..+..+
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            467888876 7899999999999998 688887632                   3345555556554  4567777777


Q ss_pred             CCCHHHHHHHHHHHHHHcCCcccEEEECCC
Q 024230           78 VSSRPQRQTLINTVSSLFNGKLNIFVNNVG  107 (270)
Q Consensus        78 ~~~~~~~~~~~~~i~~~~~~~id~li~~ag  107 (270)
                      + +++...+++        ...|++|.+..
T Consensus        81 ~-~~~~~~~~~--------~~~d~vi~~~d  101 (135)
T PF00899_consen   81 I-DEENIEELL--------KDYDIVIDCVD  101 (135)
T ss_dssp             C-SHHHHHHHH--------HTSSEEEEESS
T ss_pred             c-ccccccccc--------cCCCEEEEecC
Confidence            7 344444444        35799998865

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=96.10  E-value=0.035  Score=38.55  Aligned_cols=37  Identities=32%  Similarity=0.471  Sum_probs=33.1

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHC-CCeEEEeeC
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSML-GATVHTCSR   52 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~-G~~v~l~~r   52 (270)
                      ..++++|+++|.|. |..|+.++..|.+. +.+|.+++|
T Consensus        18 ~~~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          18 NKSLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            46789999999999 99999999999999 567888877

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=96.08  E-value=0.04  Score=47.90  Aligned_cols=77  Identities=25%  Similarity=0.230  Sum_probs=51.3

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      .+++++|.|+++++|..++......|++|+.+++++++.+.+ +   +.+....   .|..+. . ...+...   .++.
T Consensus       146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~---~~g~~~v---~~~~~~-~-~~~~~~~---~~~~  213 (326)
T cd08289         146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL-K---KLGAKEV---IPREEL-Q-EESIKPL---EKQR  213 (326)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH-H---HcCCCEE---EcchhH-H-HHHHHhh---ccCC
Confidence            367999999999999999999999999999999888775443 2   2343211   222221 1 1122222   1246


Q ss_pred             ccEEEECCC
Q 024230           99 LNIFVNNVG  107 (270)
Q Consensus        99 id~li~~ag  107 (270)
                      +|+++++.|
T Consensus       214 ~d~vld~~g  222 (326)
T cd08289         214 WAGAVDPVG  222 (326)
T ss_pred             cCEEEECCc
Confidence            899998876

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=96.05  E-value=0.099  Score=46.04  Aligned_cols=90  Identities=12%  Similarity=0.135  Sum_probs=55.5

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHH---HHHh--cCCeEEEEEccCCCHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIH---HLQM--KGLKVTGSVCDVSSRPQRQTLIN   89 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~---~~~~--~~~~~~~~~~D~~~~~~~~~~~~   89 (270)
                      ...|+||++.|.|. |.||+++|+.|...|.+|+.++|+++.......   .+.+  ...++.++.+-.+.. ...-+-+
T Consensus       141 ~~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDiVil~lP~t~~-t~~li~~  218 (330)
T PRK12480        141 SKPVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPANKE-SYHLFDK  218 (330)
T ss_pred             ccccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHHhcCCEEEEeCCCcHH-HHHHHhH
Confidence            45799999999986 779999999999999999999998764322111   1111  134566666655542 2222333


Q ss_pred             HHHHHcCCcccEEEECCCC
Q 024230           90 TVSSLFNGKLNIFVNNVGT  108 (270)
Q Consensus        90 ~i~~~~~~~id~li~~ag~  108 (270)
                      +.....  +.+.++-|++-
T Consensus       219 ~~l~~m--k~gavlIN~aR  235 (330)
T PRK12480        219 AMFDHV--KKGAILVNAAR  235 (330)
T ss_pred             HHHhcC--CCCcEEEEcCC
Confidence            333333  34445545443

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=96.04  E-value=0.07  Score=46.60  Aligned_cols=113  Identities=13%  Similarity=0.077  Sum_probs=69.5

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCC--eEEEeeCChhHHHHHHHHHHhcC---CeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTETELNECIHHLQMKG---LKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      .+|.|+|+ |.+|.++|..++..|.  +++|++.+++.++....+++...   ....+...  .+   .++ +       
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~d---y~~-~-------   69 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KD---YSV-T-------   69 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CC---HHH-h-------
Confidence            47899996 9999999999999985  69999998877666666555432   10111111  11   111 1       


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCc
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSA  158 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~  158 (270)
                       ...|++|.++|.... +  ..+..   +.+..|..=...+    .+.+.+.. ++.+++++-.
T Consensus        70 -~~adivvitaG~~~k-~--g~~R~---dll~~N~~i~~~~----~~~i~~~~p~~~vivvsNP  122 (312)
T cd05293          70 -ANSKVVIVTAGARQN-E--GESRL---DLVQRNVDIFKGI----IPKLVKYSPNAILLVVSNP  122 (312)
T ss_pred             -CCCCEEEECCCCCCC-C--CCCHH---HHHHHHHHHHHHH----HHHHHHhCCCcEEEEccCh
Confidence             578999999997543 2  23443   3455555444444    44445443 4566666643

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.04  E-value=0.013  Score=50.08  Aligned_cols=42  Identities=29%  Similarity=0.354  Sum_probs=37.1

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChh
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTET   55 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~   55 (270)
                      +..+++||+++|.|.|.-+|+.++..|.++|++|.++.+..+
T Consensus       152 ~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~  193 (285)
T PRK14189        152 IGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTR  193 (285)
T ss_pred             cCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCC
Confidence            456899999999999999999999999999999998765443

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=96.04  E-value=0.044  Score=47.11  Aligned_cols=79  Identities=29%  Similarity=0.381  Sum_probs=52.2

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC-C
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN-G   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~-~   97 (270)
                      .|++++|+|+++++|..++..+...|++|+.++++.+..+.+    ...+... .+  +..+. +   ..+.+..... .
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~-~~--~~~~~-~---~~~~i~~~~~~~  207 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALA----RALGADH-VI--DYRDP-D---LRERVKALTGGR  207 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHH----HHcCCce-ee--ecCCc-c---HHHHHHHHcCCC
Confidence            578999999999999999999999999999998887665433    2233222 12  22221 1   2222222222 3


Q ss_pred             cccEEEECCCC
Q 024230           98 KLNIFVNNVGT  108 (270)
Q Consensus        98 ~id~li~~ag~  108 (270)
                      .+|.++++.|.
T Consensus       208 ~~d~v~~~~g~  218 (323)
T cd08241         208 GVDVVYDPVGG  218 (323)
T ss_pred             CcEEEEECccH
Confidence            59999998873

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=96.03  E-value=0.067  Score=47.29  Aligned_cols=41  Identities=24%  Similarity=0.349  Sum_probs=36.3

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHH
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNEC   60 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~   60 (270)
                      .|++|+|.|+ |++|..++......|++|+++++++++.+.+
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~  206 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM  206 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            5899999999 9999999999999999999999988876543

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=96.03  E-value=0.054  Score=49.02  Aligned_cols=44  Identities=20%  Similarity=0.168  Sum_probs=38.7

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNE   59 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~   59 (270)
                      +..+.|++|+|.|.+ .||+.+++.+...|++|+++++++.+++.
T Consensus       197 ~~~l~GktVvViG~G-~IG~~va~~ak~~Ga~ViV~d~d~~R~~~  240 (413)
T cd00401         197 DVMIAGKVAVVAGYG-DVGKGCAQSLRGQGARVIVTEVDPICALQ  240 (413)
T ss_pred             CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECChhhHHH
Confidence            456899999999986 79999999999999999999998877544

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.01  E-value=0.019  Score=49.22  Aligned_cols=43  Identities=23%  Similarity=0.275  Sum_probs=37.7

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETE   56 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~   56 (270)
                      +..+++||+++|.|-|.-+|+-++..|.++|+.|.++......
T Consensus       152 ~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~~  194 (284)
T PRK14190        152 YNIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTKN  194 (284)
T ss_pred             cCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCchh
Confidence            3568999999999999999999999999999999988654443

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=95.98  E-value=0.069  Score=42.48  Aligned_cols=32  Identities=19%  Similarity=0.250  Sum_probs=27.6

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCCh
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTE   54 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~   54 (270)
                      +|+|.|+ ||+|..+++.|++.|. ++.++|.+.
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            3677874 8999999999999998 599998875

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=95.97  E-value=0.081  Score=46.03  Aligned_cols=78  Identities=17%  Similarity=0.234  Sum_probs=51.9

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      .|.+++|.|+++++|..++......|++|+.+.++++..+.+ +   ..+... ++  +..+ .+....+..   ..++.
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~---~~g~~~-v~--~~~~-~~~~~~~~~---~~~~~  207 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-K---SLGCDR-PI--NYKT-EDLGEVLKK---EYPKG  207 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-H---HcCCce-EE--eCCC-ccHHHHHHH---hcCCC
Confidence            578999999999999999999999999999998887765443 2   233221 12  2222 222222222   22246


Q ss_pred             ccEEEECCC
Q 024230           99 LNIFVNNVG  107 (270)
Q Consensus        99 id~li~~ag  107 (270)
                      +|.++++.|
T Consensus       208 vd~v~~~~g  216 (329)
T cd08250         208 VDVVYESVG  216 (329)
T ss_pred             CeEEEECCc
Confidence            999999876

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=95.96  E-value=0.018  Score=43.24  Aligned_cols=87  Identities=14%  Similarity=0.133  Sum_probs=51.9

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEe-eCChhHHHHHHHHHHhc--------CCeEEEEEccCCCHHHHHHHHHHH
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTC-SRTETELNECIHHLQMK--------GLKVTGSVCDVSSRPQRQTLINTV   91 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~-~r~~~~~~~~~~~~~~~--------~~~~~~~~~D~~~~~~~~~~~~~i   91 (270)
                      .+|-|+|+ |.+|.++++.|.+.|+.|..+ +|+.+..++....+...        -.+...+...+.| +.+..+++++
T Consensus        11 l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpD-daI~~va~~L   88 (127)
T PF10727_consen   11 LKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPD-DAIAEVAEQL   88 (127)
T ss_dssp             -EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-C-CHHHHHHHHH
T ss_pred             cEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEech-HHHHHHHHHH
Confidence            47889998 899999999999999998776 56665555554443211        0112223333333 3778888888


Q ss_pred             HHH--cCCcccEEEECCCCCC
Q 024230           92 SSL--FNGKLNIFVNNVGTSV  110 (270)
Q Consensus        92 ~~~--~~~~id~li~~ag~~~  110 (270)
                      ...  + .+=.+++||.|...
T Consensus        89 a~~~~~-~~g~iVvHtSGa~~  108 (127)
T PF10727_consen   89 AQYGAW-RPGQIVVHTSGALG  108 (127)
T ss_dssp             HCC--S--TT-EEEES-SS--
T ss_pred             HHhccC-CCCcEEEECCCCCh
Confidence            765  3 34468999999754

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.96  E-value=0.016  Score=49.51  Aligned_cols=42  Identities=29%  Similarity=0.426  Sum_probs=37.7

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChh
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTET   55 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~   55 (270)
                      +..+++||+++|+|-|.-+|+.++..|.++|+.|.++.+..+
T Consensus       153 ~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~  194 (285)
T PRK10792        153 YGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTK  194 (285)
T ss_pred             cCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCC
Confidence            356899999999999999999999999999999999876544

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=95.95  E-value=0.1  Score=45.28  Aligned_cols=114  Identities=16%  Similarity=0.106  Sum_probs=67.9

Q ss_pred             EEEecCCCcHHHHHHHHHHHCC--CeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           23 ALVTGGTKGLGLAVVEELSMLG--ATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        23 vlItG~s~giG~~la~~l~~~G--~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      |.|.|+ |.+|.++|..++..|  .++++++++++..+....+++.............++.  .+ .+        ..-|
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~~~--~~-~l--------~~aD   68 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRGGD--YA-DA--------ADAD   68 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEECCC--HH-Hh--------CCCC
Confidence            467887 679999999999999  5799999999887777776665321100001111111  11 12        5789


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCc
Q 024230          101 IFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSA  158 (270)
Q Consensus       101 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~  158 (270)
                      ++|.++|.... +  ..+..   +.+..|+.-.    +.+.+.+++.. .+.+++++..
T Consensus        69 iVIitag~p~~-~--~~~R~---~l~~~n~~i~----~~~~~~i~~~~p~~~viv~sNP  117 (300)
T cd00300          69 IVVITAGAPRK-P--GETRL---DLINRNAPIL----RSVITNLKKYGPDAIILVVSNP  117 (300)
T ss_pred             EEEEcCCCCCC-C--CCCHH---HHHHHHHHHH----HHHHHHHHHhCCCeEEEEccCh
Confidence            99999998532 1  23332   3344554444    44444445543 4566666643

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.94  E-value=0.039  Score=50.62  Aligned_cols=79  Identities=13%  Similarity=0.091  Sum_probs=60.2

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      .+..+.++|.|+ |.+|+.+++.|.+.|+.|++++++++..++..+.    +..+.++..|.++.+.++++-      . 
T Consensus       228 ~~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~----~~~~~~i~gd~~~~~~L~~~~------~-  295 (453)
T PRK09496        228 EKPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEE----LPNTLVLHGDGTDQELLEEEG------I-  295 (453)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH----CCCCeEEECCCCCHHHHHhcC------C-
Confidence            356789999999 9999999999999999999999998876654432    234567888999887654432      1 


Q ss_pred             CcccEEEECCC
Q 024230           97 GKLNIFVNNVG  107 (270)
Q Consensus        97 ~~id~li~~ag  107 (270)
                      .+.|.+|.+..
T Consensus       296 ~~a~~vi~~~~  306 (453)
T PRK09496        296 DEADAFIALTN  306 (453)
T ss_pred             ccCCEEEECCC
Confidence            46788876654

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=95.93  E-value=0.23  Score=43.28  Aligned_cols=110  Identities=9%  Similarity=0.020  Sum_probs=65.2

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCC--CeEEEeeCChhHHHHHHHHHHhcC---CeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           22 TALVTGGTKGLGLAVVEELSMLG--ATVHTCSRTETELNECIHHLQMKG---LKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G--~~v~l~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      +|.|.|+ |.+|..+|..|+.+|  .+|++++++++..+.....+....   ...... .  .+.   .    .    + 
T Consensus         2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~-~--~d~---~----~----l-   65 (308)
T cd05292           2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIY-A--GDY---A----D----C-   65 (308)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEe-e--CCH---H----H----h-
Confidence            5889998 899999999999999  579999999876654333333211   111111 1  121   1    1    2 


Q ss_pred             CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEecC
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRAS-GAASIVLMSS  157 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~ii~iss  157 (270)
                      ...|++|.+++.....   ..+   ..+.+..|+.-.-.+.+.+    .+. ..|.+++++.
T Consensus        66 ~~aDiViita~~~~~~---~~~---r~dl~~~n~~i~~~~~~~l----~~~~~~giiiv~tN  117 (308)
T cd05292          66 KGADVVVITAGANQKP---GET---RLDLLKRNVAIFKEIIPQI----LKYAPDAILLVVTN  117 (308)
T ss_pred             CCCCEEEEccCCCCCC---CCC---HHHHHHHHHHHHHHHHHHH----HHHCCCeEEEEecC
Confidence            5789999999975321   122   2334555554444444443    433 3466666653

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK08223 hypothetical protein; Validated

Probab=95.93  E-value=0.055  Score=46.41  Aligned_cols=38  Identities=18%  Similarity=0.179  Sum_probs=32.7

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCCh
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTE   54 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~   54 (270)
                      -.|++.+|+|.|+ ||+|..++..|+..|. ++.++|.+.
T Consensus        23 ~kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~   61 (287)
T PRK08223         23 QRLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDV   61 (287)
T ss_pred             HHHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence            4678899999987 6999999999999997 688888754

>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.93  E-value=0.016  Score=49.46  Aligned_cols=44  Identities=34%  Similarity=0.401  Sum_probs=38.6

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETEL   57 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~   57 (270)
                      +..+++||.++|.|-|.-+|+-++..|.++|+.|.++.+..+.+
T Consensus       152 y~i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl  195 (282)
T PRK14180        152 YGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDL  195 (282)
T ss_pred             hCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCH
Confidence            45689999999999999999999999999999999886654433

>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.90  E-value=0.017  Score=49.50  Aligned_cols=44  Identities=23%  Similarity=0.233  Sum_probs=38.4

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETEL   57 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~   57 (270)
                      +..+++||.++|.|.|.-+|+-++..|.++|+.|.++.+..+.+
T Consensus       149 ~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~l  192 (287)
T PRK14173        149 YGIPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQDL  192 (287)
T ss_pred             cCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCCH
Confidence            45689999999999999999999999999999998886655443

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=95.90  E-value=0.018  Score=47.85  Aligned_cols=38  Identities=16%  Similarity=0.304  Sum_probs=34.7

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCC---eEEEeeCC
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGA---TVHTCSRT   53 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~---~v~l~~r~   53 (270)
                      ..++++++++|.|+ |+.|..++..|++.|.   ++.+++|+
T Consensus        20 g~~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~   60 (226)
T cd05311          20 GKKIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK   60 (226)
T ss_pred             CCCccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence            45789999999999 8999999999999997   49999998

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=95.90  E-value=0.036  Score=49.50  Aligned_cols=78  Identities=22%  Similarity=0.301  Sum_probs=52.0

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      .|++|+|+|+ |++|..++......|+ +|+.+++++++++.+ +   +.|....   .|..++ +   ..+++.+..++
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~---~~Ga~~~---i~~~~~-~---~~~~i~~~~~~  258 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA-R---ELGATAT---VNAGDP-N---AVEQVRELTGG  258 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-H---HcCCceE---eCCCch-h---HHHHHHHHhCC
Confidence            5789999985 8999999998888999 598899888876543 2   2343221   233332 2   23333333334


Q ss_pred             cccEEEECCCC
Q 024230           98 KLNIFVNNVGT  108 (270)
Q Consensus        98 ~id~li~~ag~  108 (270)
                      .+|++|.+.|.
T Consensus       259 g~d~vid~~G~  269 (371)
T cd08281         259 GVDYAFEMAGS  269 (371)
T ss_pred             CCCEEEECCCC
Confidence            79999999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.89  E-value=0.02  Score=49.39  Aligned_cols=41  Identities=29%  Similarity=0.346  Sum_probs=36.9

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEee-CCh
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCS-RTE   54 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~-r~~   54 (270)
                      +..+++||+|+|.|-++-+|+.+|..|+++|+.|.++. |+.
T Consensus       152 ~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~  193 (296)
T PRK14188        152 VHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR  193 (296)
T ss_pred             hCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC
Confidence            35689999999999999999999999999999999994 554

>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.89  E-value=0.016  Score=49.49  Aligned_cols=45  Identities=27%  Similarity=0.354  Sum_probs=39.2

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELN   58 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~   58 (270)
                      +..+++||.++|.|-|.-+|+-++..|.++|+.|.++.+....++
T Consensus       153 y~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l~  197 (284)
T PRK14177        153 YGIDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNLP  197 (284)
T ss_pred             hCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHH
Confidence            467999999999999999999999999999999999876554443

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.88  E-value=0.014  Score=49.91  Aligned_cols=38  Identities=26%  Similarity=0.246  Sum_probs=35.3

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEee
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCS   51 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~   51 (270)
                      +..+++||.++|.|-|+-+|+.+|..|.++|+.|.++.
T Consensus       152 ~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~  189 (284)
T PRK14179        152 YNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTH  189 (284)
T ss_pred             hCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEEC
Confidence            45689999999999999999999999999999999883

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.88  E-value=0.019  Score=49.22  Aligned_cols=42  Identities=21%  Similarity=0.291  Sum_probs=37.3

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChh
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTET   55 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~   55 (270)
                      +..+++||+++|+|-|.-+|+-++..|.++|+.|.++....+
T Consensus       158 ~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~  199 (287)
T PRK14176        158 YGVDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTD  199 (287)
T ss_pred             cCCCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCC
Confidence            456899999999999999999999999999999988875433

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=95.87  E-value=0.048  Score=47.76  Aligned_cols=86  Identities=20%  Similarity=0.252  Sum_probs=52.3

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      .|++++|.|+++++|..+++.....|++|+.+.++.+..++..+.+.+.+....+..-+.+ ..+   ..+.+....++.
T Consensus       146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~---~~~~i~~~~~~~  221 (341)
T cd08290         146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEELR-SLL---ATELLKSAPGGR  221 (341)
T ss_pred             CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccc-ccc---HHHHHHHHcCCC
Confidence            5799999999999999999999999999888877653222222333334433221111110 002   222233333236


Q ss_pred             ccEEEECCCC
Q 024230           99 LNIFVNNVGT  108 (270)
Q Consensus        99 id~li~~ag~  108 (270)
                      +|.++.+.|.
T Consensus       222 ~d~vld~~g~  231 (341)
T cd08290         222 PKLALNCVGG  231 (341)
T ss_pred             ceEEEECcCc
Confidence            9999998873

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.86  E-value=0.018  Score=49.20  Aligned_cols=41  Identities=22%  Similarity=0.263  Sum_probs=36.5

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTE   54 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~   54 (270)
                      +..+++||.++|.|.|.-+|+-++..|.++|+.|.++....
T Consensus       151 ~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T  191 (281)
T PRK14183        151 YEIDVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFT  191 (281)
T ss_pred             cCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC
Confidence            45799999999999999999999999999999998775443

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=95.86  E-value=0.054  Score=46.38  Aligned_cols=79  Identities=22%  Similarity=0.270  Sum_probs=52.3

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC-C
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN-G   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~-~   97 (270)
                      +|++++|.|+++++|..+++.....|++|+.+++++++.+.+ +   ..+... ++  +..+ .+..   ..+..... .
T Consensus       136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~---~~g~~~-~~--~~~~-~~~~---~~~~~~~~~~  204 (320)
T cd05286         136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA-R---AAGADH-VI--NYRD-EDFV---ERVREITGGR  204 (320)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-H---HCCCCE-EE--eCCc-hhHH---HHHHHHcCCC
Confidence            689999999999999999999999999999998887765443 2   233322 12  1122 1222   22222221 3


Q ss_pred             cccEEEECCCC
Q 024230           98 KLNIFVNNVGT  108 (270)
Q Consensus        98 ~id~li~~ag~  108 (270)
                      .+|.++++.+.
T Consensus       205 ~~d~vl~~~~~  215 (320)
T cd05286         205 GVDVVYDGVGK  215 (320)
T ss_pred             CeeEEEECCCc
Confidence            69999998763

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.85  E-value=0.018  Score=49.08  Aligned_cols=44  Identities=25%  Similarity=0.331  Sum_probs=38.2

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETEL   57 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~   57 (270)
                      +..+++||.++|.|-|.-+|+-++..|.++|+.|.++.+....+
T Consensus       152 ~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l  195 (278)
T PRK14172        152 LNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNL  195 (278)
T ss_pred             hCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCH
Confidence            45689999999999999999999999999999998886554433

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=95.84  E-value=0.059  Score=42.52  Aligned_cols=96  Identities=16%  Similarity=0.047  Sum_probs=57.7

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCC--------------
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSS--------------   80 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--------------   80 (270)
                      ...+...+|+|+| +|..|...++.|...|++|+..+.+.+..++.    +.....  .+..+..+              
T Consensus        15 ~~~~~p~~vvv~G-~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~----~~~~~~--~i~~~~~~~~~~~~~~~~~~~~   87 (168)
T PF01262_consen   15 PGGVPPAKVVVTG-AGRVGQGAAEIAKGLGAEVVVPDERPERLRQL----ESLGAY--FIEVDYEDHLERKDFDKADYYE   87 (168)
T ss_dssp             TTEE-T-EEEEES-TSHHHHHHHHHHHHTT-EEEEEESSHHHHHHH----HHTTTE--ESEETTTTTTTSB-CCHHHCHH
T ss_pred             CCCCCCeEEEEEC-CCHHHHHHHHHHhHCCCEEEeccCCHHHHHhh----hcccCc--eEEEcccccccccccchhhhhH
Confidence            3466778999999 68999999999999999999999987766543    222222  22222211              


Q ss_pred             -HHHHHHHHHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHH
Q 024230           81 -RPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAED  121 (270)
Q Consensus        81 -~~~~~~~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~  121 (270)
                       ++..+..+.+..    .+.|++|.++-++..+...-++.++
T Consensus        88 ~~~~~~~~f~~~i----~~~d~vI~~~~~~~~~~P~lvt~~~  125 (168)
T PF01262_consen   88 HPESYESNFAEFI----APADIVIGNGLYWGKRAPRLVTEEM  125 (168)
T ss_dssp             HCCHHHHHHHHHH----HH-SEEEEHHHBTTSS---SBEHHH
T ss_pred             HHHHhHHHHHHHH----hhCcEEeeecccCCCCCCEEEEhHH
Confidence             223333443332    3569999888877666555566555

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=95.83  E-value=0.057  Score=47.91  Aligned_cols=78  Identities=19%  Similarity=0.311  Sum_probs=51.3

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCe-EEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC-
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGAT-VHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN-   96 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~-v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~-   96 (270)
                      .|++|+|.|+ |++|..++......|++ |+.+++++++.+.+    ++.|....   .|..+++.    .+++.+..+ 
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~----~~~Ga~~~---i~~~~~~~----~~~i~~~~~~  243 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWA----REFGATHT---VNSSGTDP----VEAIRALTGG  243 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH----HHcCCceE---EcCCCcCH----HHHHHHHhCC
Confidence            4889999975 99999999988889985 88888888776543    23343221   23333222    222333222 


Q ss_pred             CcccEEEECCCC
Q 024230           97 GKLNIFVNNVGT  108 (270)
Q Consensus        97 ~~id~li~~ag~  108 (270)
                      ..+|+++.+.|.
T Consensus       244 ~g~d~vid~~g~  255 (358)
T TIGR03451       244 FGADVVIDAVGR  255 (358)
T ss_pred             CCCCEEEECCCC
Confidence            359999999884

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=95.83  E-value=0.11  Score=46.34  Aligned_cols=79  Identities=18%  Similarity=0.254  Sum_probs=53.5

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCH-HHHHHHHHHHHHHcC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR-PQRQTLINTVSSLFN   96 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~i~~~~~   96 (270)
                      .|.+|+|.| +|++|..++..+...|+ +|+.+++++++.+.+ ++   .|....   .|..+. +++.+.+.++   .+
T Consensus       186 ~g~~VlV~G-~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~---lGa~~~---i~~~~~~~~~~~~v~~~---~~  254 (368)
T cd08300         186 PGSTVAVFG-LGAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KK---FGATDC---VNPKDHDKPIQQVLVEM---TD  254 (368)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HH---cCCCEE---EcccccchHHHHHHHHH---hC
Confidence            488999997 58999999999999999 699999988876543 22   343322   233332 2333333332   22


Q ss_pred             CcccEEEECCCC
Q 024230           97 GKLNIFVNNVGT  108 (270)
Q Consensus        97 ~~id~li~~ag~  108 (270)
                      +.+|+++.+.|.
T Consensus       255 ~g~d~vid~~g~  266 (368)
T cd08300         255 GGVDYTFECIGN  266 (368)
T ss_pred             CCCcEEEECCCC
Confidence            479999999874

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=95.83  E-value=0.093  Score=46.82  Aligned_cols=79  Identities=19%  Similarity=0.277  Sum_probs=52.2

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHcC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSS-RPQRQTLINTVSSLFN   96 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~   96 (270)
                      .|.+++|+|+ |++|..++......|+ +|+.+++++++++.+ ++   .|....   .|..+ .+++.+.+.   +..+
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~---~Ga~~~---i~~~~~~~~~~~~v~---~~~~  253 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA-KK---LGATDC---VNPNDYDKPIQEVIV---EITD  253 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HH---hCCCeE---EcccccchhHHHHHH---HHhC
Confidence            5889999975 9999999998888998 799999888876544 22   343221   23332 122222232   2222


Q ss_pred             CcccEEEECCCC
Q 024230           97 GKLNIFVNNVGT  108 (270)
Q Consensus        97 ~~id~li~~ag~  108 (270)
                      +.+|+++.+.|.
T Consensus       254 ~g~d~vid~~G~  265 (368)
T TIGR02818       254 GGVDYSFECIGN  265 (368)
T ss_pred             CCCCEEEECCCC
Confidence            479999999884

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.82  E-value=0.073  Score=46.93  Aligned_cols=41  Identities=24%  Similarity=0.276  Sum_probs=37.1

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETE   56 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~   56 (270)
                      +.+|.||++.|.|- |.||+.+|+.|...|.+|+.++|+.+.
T Consensus       145 g~~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~  185 (333)
T PRK13243        145 GYDVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKP  185 (333)
T ss_pred             ccCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCCh
Confidence            45899999999998 899999999999999999999987543

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=95.81  E-value=0.097  Score=45.06  Aligned_cols=76  Identities=26%  Similarity=0.373  Sum_probs=52.3

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      .|.+++|.|+++++|..++......|++|+.+.+++++.+.+ .   +.+.... + .+  +. +   +.+++.+. +.+
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~---~~g~~~~-~-~~--~~-~---~~~~i~~~-~~~  208 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL-K---ELGADEV-V-ID--DG-A---IAEQLRAA-PGG  208 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-H---hcCCcEE-E-ec--Cc-c---HHHHHHHh-CCC
Confidence            578999999999999999999999999999998887765433 2   2343222 1 12  11 2   22223222 357


Q ss_pred             ccEEEECCC
Q 024230           99 LNIFVNNVG  107 (270)
Q Consensus        99 id~li~~ag  107 (270)
                      +|.++++.|
T Consensus       209 ~d~vl~~~~  217 (320)
T cd08243         209 FDKVLELVG  217 (320)
T ss_pred             ceEEEECCC
Confidence            999999887

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.79  E-value=0.019  Score=49.04  Aligned_cols=44  Identities=25%  Similarity=0.277  Sum_probs=38.3

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETEL   57 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~   57 (270)
                      +..+++||+++|.|-|.-+|+-++..|.++|+.|.++......+
T Consensus       151 ~~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T~~l  194 (284)
T PRK14170        151 TGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDL  194 (284)
T ss_pred             hCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCH
Confidence            45799999999999999999999999999999998876554433

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=95.79  E-value=0.071  Score=46.48  Aligned_cols=79  Identities=22%  Similarity=0.291  Sum_probs=49.9

Q ss_pred             CCCEEEE-ecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC-
Q 024230           19 QGMTALV-TGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN-   96 (270)
Q Consensus        19 ~gk~vlI-tG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~-   96 (270)
                      .+..++| +|+++++|..++......|++|+.+++++++.+.+.    +.+.... +  |..+. +   ..+++.+..+ 
T Consensus       142 ~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~----~~g~~~~-i--~~~~~-~---~~~~v~~~~~~  210 (324)
T cd08291         142 EGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLK----KIGAEYV-L--NSSDP-D---FLEDLKELIAK  210 (324)
T ss_pred             CCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----HcCCcEE-E--ECCCc-c---HHHHHHHHhCC
Confidence            4545555 599999999999888888999999998877655432    2343322 2  22222 2   2222333222 


Q ss_pred             CcccEEEECCCC
Q 024230           97 GKLNIFVNNVGT  108 (270)
Q Consensus        97 ~~id~li~~ag~  108 (270)
                      ..+|+++++.|.
T Consensus       211 ~~~d~vid~~g~  222 (324)
T cd08291         211 LNATIFFDAVGG  222 (324)
T ss_pred             CCCcEEEECCCc
Confidence            369999998873

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=95.75  E-value=0.056  Score=48.51  Aligned_cols=39  Identities=13%  Similarity=0.072  Sum_probs=33.2

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHC-CCeEEEeeCChhH
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSML-GATVHTCSRTETE   56 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~-G~~v~l~~r~~~~   56 (270)
                      -+.++|.|.||+|.+|+.+.+.|.++ ..+|..+.++...
T Consensus        36 ~~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~sa   75 (381)
T PLN02968         36 EEKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKA   75 (381)
T ss_pred             ccccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhc
Confidence            35579999999999999999999999 6788888875444

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=95.74  E-value=0.061  Score=46.57  Aligned_cols=80  Identities=18%  Similarity=0.243  Sum_probs=53.4

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC-
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN-   96 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~-   96 (270)
                      -.|.+++|.|+++++|..++..+...|++|+.+.+++++.+.+ +   +.+...   ..+..+.+    ....+..... 
T Consensus       137 ~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~---~~g~~~---~~~~~~~~----~~~~~~~~~~~  205 (323)
T cd05282         137 PPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL-K---ALGADE---VIDSSPED----LAQRVKEATGG  205 (323)
T ss_pred             CCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH-H---hcCCCE---Eecccchh----HHHHHHHHhcC
Confidence            3578999999999999999999999999999988887765433 2   233221   12222222    2222333322 


Q ss_pred             CcccEEEECCCC
Q 024230           97 GKLNIFVNNVGT  108 (270)
Q Consensus        97 ~~id~li~~ag~  108 (270)
                      ..+|.++.+.|.
T Consensus       206 ~~~d~vl~~~g~  217 (323)
T cd05282         206 AGARLALDAVGG  217 (323)
T ss_pred             CCceEEEECCCC
Confidence            369999999873

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PLN02740 Alcohol dehydrogenase-like

Probab=95.74  E-value=0.12  Score=46.37  Aligned_cols=79  Identities=16%  Similarity=0.201  Sum_probs=52.8

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCH-HHHHHHHHHHHHHcC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR-PQRQTLINTVSSLFN   96 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~i~~~~~   96 (270)
                      .|++|+|.|+ |++|..++......|+ +|+.+++++++++...    +.|....   .|..+. +++.+.+.+   ..+
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~----~~Ga~~~---i~~~~~~~~~~~~v~~---~~~  266 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGK----EMGITDF---INPKDSDKPVHERIRE---MTG  266 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHH----HcCCcEE---EecccccchHHHHHHH---HhC
Confidence            5889999985 9999999999999999 5999999888765542    2343322   233322 123333322   222


Q ss_pred             CcccEEEECCCC
Q 024230           97 GKLNIFVNNVGT  108 (270)
Q Consensus        97 ~~id~li~~ag~  108 (270)
                      +.+|+++.+.|.
T Consensus       267 ~g~dvvid~~G~  278 (381)
T PLN02740        267 GGVDYSFECAGN  278 (381)
T ss_pred             CCCCEEEECCCC
Confidence            369999999984

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=95.73  E-value=0.081  Score=42.99  Aligned_cols=37  Identities=24%  Similarity=0.387  Sum_probs=31.1

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCC
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRT   53 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~   53 (270)
                      -.|++++|+|.|+ ||+|.++++.|+..|. ++.++|.+
T Consensus        17 ~~L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d   54 (197)
T cd01492          17 KRLRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDR   54 (197)
T ss_pred             HHHHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECC
Confidence            3577899999975 5599999999999997 58888764

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PLN02928 oxidoreductase family protein

Probab=95.72  E-value=0.031  Score=49.54  Aligned_cols=39  Identities=23%  Similarity=0.355  Sum_probs=35.8

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChh
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTET   55 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~   55 (270)
                      .+|.||++.|.|- |.||+.+|+.+...|.+|+.++|+..
T Consensus       155 ~~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~  193 (347)
T PLN02928        155 DTLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWT  193 (347)
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCC
Confidence            5799999999998 89999999999999999999998743

>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.71  E-value=0.023  Score=48.61  Aligned_cols=44  Identities=16%  Similarity=0.205  Sum_probs=38.0

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETEL   57 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~   57 (270)
                      +..+++||+++|.|-|.-+|+-++..|.++|+.|.++.+....+
T Consensus       150 ~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l  193 (282)
T PRK14169        150 YDIDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNL  193 (282)
T ss_pred             hCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCH
Confidence            45689999999999999999999999999999998885544433

>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]

Probab=95.70  E-value=0.12  Score=42.47  Aligned_cols=88  Identities=22%  Similarity=0.194  Sum_probs=55.0

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh-hHHHHHHHHHH-----h-c----CCeEEEEEccCCCHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTE-TELNECIHHLQ-----M-K----GLKVTGSVCDVSSRPQR   84 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~-~~~~~~~~~~~-----~-~----~~~~~~~~~D~~~~~~~   84 (270)
                      .+|+||+|+|+|| |..|.-=++.|++.|++|++++... +++..+.++-.     + .    -....++.+...|++--
T Consensus         8 ~~l~~k~VlvvGg-G~va~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~~~~i~~~~~~~~~~~~~~~~lviaAt~d~~ln   86 (210)
T COG1648           8 LDLEGKKVLVVGG-GSVALRKARLLLKAGADVTVVSPEFEPELKALIEEGKIKWIEREFDAEDLDDAFLVIAATDDEELN   86 (210)
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHhcCCEEEEEcCCccHHHHHHHHhcCcchhhcccChhhhcCceEEEEeCCCHHHH
Confidence            5899999999998 5688889999999999999987765 33333333222     0 0    01244444555554444


Q ss_pred             HHHHHHHHHHcCCcccEEEECCCCC
Q 024230           85 QTLINTVSSLFNGKLNIFVNNVGTS  109 (270)
Q Consensus        85 ~~~~~~i~~~~~~~id~li~~ag~~  109 (270)
                      +.+++.+..     ..+++|.+...
T Consensus        87 ~~i~~~a~~-----~~i~vNv~D~p  106 (210)
T COG1648          87 ERIAKAARE-----RRILVNVVDDP  106 (210)
T ss_pred             HHHHHHHHH-----hCCceeccCCc
Confidence            444444433     34667776543

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=95.69  E-value=0.19  Score=43.62  Aligned_cols=82  Identities=12%  Similarity=0.156  Sum_probs=54.8

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHH----------HHh--cCCeEEEEEccCCCHHHHHHHHH
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHH----------LQM--KGLKVTGSVCDVSSRPQRQTLIN   89 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~----------~~~--~~~~~~~~~~D~~~~~~~~~~~~   89 (270)
                      +|.|.|. |.+|..+++.|+++|++|.+++|+++..+++.+.          +.+  ...++.  .+-+.+. .++++++
T Consensus         2 ~Ig~IGl-G~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~~~s~~~~~~~~~~~dvI--i~~vp~~-~~~~v~~   77 (298)
T TIGR00872         2 QLGLIGL-GRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGVANLRELSQRLSAPRVV--WVMVPHG-IVDAVLE   77 (298)
T ss_pred             EEEEEcc-hHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcccCCHHHHHhhcCCCCEE--EEEcCch-HHHHHHH
Confidence            5777874 8899999999999999999999999877665431          110  011222  2233444 6777777


Q ss_pred             HHHHHcCCcccEEEECCCC
Q 024230           90 TVSSLFNGKLNIFVNNVGT  108 (270)
Q Consensus        90 ~i~~~~~~~id~li~~ag~  108 (270)
                      ++...+ .+=+++|++...
T Consensus        78 ~l~~~l-~~g~ivid~st~   95 (298)
T TIGR00872        78 ELAPTL-EKGDIVIDGGNS   95 (298)
T ss_pred             HHHhhC-CCCCEEEECCCC
Confidence            777665 333677776554

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=95.67  E-value=0.087  Score=47.77  Aligned_cols=85  Identities=11%  Similarity=0.110  Sum_probs=52.1

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC---eEEEeeCChhHHHHHHHHHHhc----CCeEEEEEccCCCHHHHHHHHHHH
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGA---TVHTCSRTETELNECIHHLQMK----GLKVTGSVCDVSSRPQRQTLINTV   91 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~---~v~l~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~i   91 (270)
                      .|.+++|.|++|++|..++..+...|+   +|+.+++++++++...+.+...    |....+  .|..+.+++.+.+   
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~--i~~~~~~~~~~~v---  249 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLY--VNPATIDDLHATL---  249 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEE--ECCCccccHHHHH---
Confidence            468999999999999998877766654   7999999988876544321100    222122  2332222333333   


Q ss_pred             HHHcC-CcccEEEECCCC
Q 024230           92 SSLFN-GKLNIFVNNVGT  108 (270)
Q Consensus        92 ~~~~~-~~id~li~~ag~  108 (270)
                      .+..+ ..+|.+|.+.|.
T Consensus       250 ~~~t~g~g~D~vid~~g~  267 (410)
T cd08238         250 MELTGGQGFDDVFVFVPV  267 (410)
T ss_pred             HHHhCCCCCCEEEEcCCC
Confidence            22222 369999998773

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=95.66  E-value=0.13  Score=45.09  Aligned_cols=114  Identities=11%  Similarity=0.082  Sum_probs=66.4

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCC-------eEEEeeCCh--hHHHHHHHHHHhcCCeEEEEE-ccCCCHHHHHHHHHH
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGA-------TVHTCSRTE--TELNECIHHLQMKGLKVTGSV-CDVSSRPQRQTLINT   90 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~-------~v~l~~r~~--~~~~~~~~~~~~~~~~~~~~~-~D~~~~~~~~~~~~~   90 (270)
                      -+|.|+|++|.+|.++|..|+..|.       +++|++.++  +.++....++......  ... ..++ ..+. +.   
T Consensus         4 ~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~--~~~~~~i~-~~~~-~~---   76 (323)
T TIGR01759         4 VRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFP--LLAGVVAT-TDPE-EA---   76 (323)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhcccc--ccCCcEEe-cChH-HH---
Confidence            3789999999999999999999984       799999965  3344444444332100  000 0011 0111 11   


Q ss_pred             HHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CcEEEEec
Q 024230           91 VSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG--AASIVLMS  156 (270)
Q Consensus        91 i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~--~g~ii~is  156 (270)
                          + ..-|++|.+||... ++  ..+.   .+.+..|+.-.-.+    .+.+.+..  .+.++++|
T Consensus        77 ----~-~daDvVVitAG~~~-k~--g~tR---~dll~~Na~i~~~i----~~~i~~~~~~~~iiivvs  129 (323)
T TIGR01759        77 ----F-KDVDAALLVGAFPR-KP--GMER---ADLLSKNGKIFKEQ----GKALNKVAKKDVKVLVVG  129 (323)
T ss_pred             ----h-CCCCEEEEeCCCCC-CC--CCcH---HHHHHHHHHHHHHH----HHHHHhhCCCCeEEEEeC
Confidence                1 57899999999742 22  2333   34566666555444    44445553  45566555

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=95.66  E-value=0.1  Score=46.65  Aligned_cols=37  Identities=27%  Similarity=0.407  Sum_probs=32.3

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCC
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRT   53 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~   53 (270)
                      ..|++++|+|.|+ ||+|..+++.|+..|. ++++++.+
T Consensus        37 ~~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         37 ERLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            4678899999987 6999999999999996 79999875

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=95.66  E-value=0.089  Score=46.12  Aligned_cols=79  Identities=19%  Similarity=0.229  Sum_probs=52.6

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC-C
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN-G   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~-~   97 (270)
                      .+.+++|.|+++++|.+++..+...|++|+.+.+++++.+.+ ++   .+....   .+..+.+..++    +.+..+ +
T Consensus       165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~---~g~~~v---~~~~~~~~~~~----~~~~~~~~  233 (341)
T cd08297         165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELA-KE---LGADAF---VDFKKSDDVEA----VKELTGGG  233 (341)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HH---cCCcEE---EcCCCccHHHH----HHHHhcCC
Confidence            478999999999999999999999999999999988765433 32   232211   22222222222    222222 4


Q ss_pred             cccEEEECCCC
Q 024230           98 KLNIFVNNVGT  108 (270)
Q Consensus        98 ~id~li~~ag~  108 (270)
                      .+|.++++.+.
T Consensus       234 ~vd~vl~~~~~  244 (341)
T cd08297         234 GAHAVVVTAVS  244 (341)
T ss_pred             CCCEEEEcCCc
Confidence            69999986653

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.65  E-value=0.023  Score=48.69  Aligned_cols=44  Identities=18%  Similarity=0.269  Sum_probs=38.2

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETEL   57 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~   57 (270)
                      +..+++||.++|.|-|.-+|+-++..|.++|+.|.++......+
T Consensus       153 y~i~l~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~T~~L  196 (288)
T PRK14171        153 YEPNLTGKNVVIIGRSNIVGKPLSALLLKENCSVTICHSKTHNL  196 (288)
T ss_pred             hCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCH
Confidence            45689999999999999999999999999999998876554433

>PRK05442 malate dehydrogenase; Provisional

Probab=95.64  E-value=0.07  Score=46.87  Aligned_cols=113  Identities=10%  Similarity=0.123  Sum_probs=66.2

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCC-------eEEEeeCChh--HHHHHHHHHHhcC----CeEEEEEccCCCHHHHHH
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGA-------TVHTCSRTET--ELNECIHHLQMKG----LKVTGSVCDVSSRPQRQT   86 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~-------~v~l~~r~~~--~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~   86 (270)
                      .++|.|+|++|.+|.++|..++..|.       +++|++.+++  .++....++....    ..+.     ++. ++ . 
T Consensus         4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~-----i~~-~~-y-   75 (326)
T PRK05442          4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVV-----ITD-DP-N-   75 (326)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcE-----Eec-Ch-H-
Confidence            45899999999999999999998874       6999998543  2333333332211    1111     110 11 1 


Q ss_pred             HHHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCcEEEEecC
Q 024230           87 LINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRAS--GAASIVLMSS  157 (270)
Q Consensus        87 ~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~--~~g~ii~iss  157 (270)
                            +.+ ..-|++|.+||... ++  ..+.   .+.+..|+.    +++.+.+.+.+.  ..+.+|++|-
T Consensus        76 ------~~~-~daDiVVitaG~~~-k~--g~tR---~dll~~Na~----i~~~i~~~i~~~~~~~~iiivvsN  131 (326)
T PRK05442         76 ------VAF-KDADVALLVGARPR-GP--GMER---KDLLEANGA----IFTAQGKALNEVAARDVKVLVVGN  131 (326)
T ss_pred             ------HHh-CCCCEEEEeCCCCC-CC--CCcH---HHHHHHHHH----HHHHHHHHHHHhCCCCeEEEEeCC
Confidence                  112 57899999999742 22  2333   344666654    444555555663  2456666653

>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.63  E-value=0.025  Score=48.73  Aligned_cols=45  Identities=22%  Similarity=0.259  Sum_probs=38.6

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELN   58 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~   58 (270)
                      +..+++||.++|.|-|.-+|+-++..|.++|+.|.++.+....++
T Consensus       152 ~~i~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l~  196 (297)
T PRK14186        152 QQIDIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDLA  196 (297)
T ss_pred             hCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHH
Confidence            356899999999999999999999999999999988865544443

>PLN02494 adenosylhomocysteinase

Probab=95.62  E-value=0.059  Score=49.32  Aligned_cols=42  Identities=17%  Similarity=0.175  Sum_probs=37.2

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETEL   57 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~   57 (270)
                      +..+.||+++|.|.+ .||+.+|+.+...|++|+++++++.+.
T Consensus       249 ~i~LaGKtVvViGyG-~IGr~vA~~aka~Ga~VIV~e~dp~r~  290 (477)
T PLN02494        249 DVMIAGKVAVICGYG-DVGKGCAAAMKAAGARVIVTEIDPICA  290 (477)
T ss_pred             CCccCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchhh
Confidence            456899999999986 999999999999999999999987653

>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.62  E-value=0.025  Score=48.33  Aligned_cols=45  Identities=27%  Similarity=0.417  Sum_probs=38.9

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELN   58 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~   58 (270)
                      +..+++||+++|.|-|.-+|+-++..|.++|+.|.++.+..+.++
T Consensus       151 y~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~nl~  195 (282)
T PRK14166        151 YEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLS  195 (282)
T ss_pred             hCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHH
Confidence            457899999999999999999999999999999998876554433

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=95.62  E-value=0.078  Score=45.33  Aligned_cols=77  Identities=19%  Similarity=0.213  Sum_probs=49.5

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCe-EEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGAT-VHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~~-v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      ..|++++|.|+ |++|..++..+...|++ |+.+++++++.+. .   ++.+....   .|..+   ..+.   +.+...
T Consensus       119 ~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~-a---~~~Ga~~~---i~~~~---~~~~---~~~~~~  184 (280)
T TIGR03366       119 LKGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRREL-A---LSFGATAL---AEPEV---LAER---QGGLQN  184 (280)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH-H---HHcCCcEe---cCchh---hHHH---HHHHhC
Confidence            37899999986 89999999988889987 8888877776543 2   23343222   12211   1122   222211


Q ss_pred             -CcccEEEECCCC
Q 024230           97 -GKLNIFVNNVGT  108 (270)
Q Consensus        97 -~~id~li~~ag~  108 (270)
                       ..+|+++.+.|.
T Consensus       185 ~~g~d~vid~~G~  197 (280)
T TIGR03366       185 GRGVDVALEFSGA  197 (280)
T ss_pred             CCCCCEEEECCCC
Confidence             359999999884

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=95.61  E-value=0.083  Score=45.91  Aligned_cols=79  Identities=19%  Similarity=0.337  Sum_probs=52.6

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC-C
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN-G   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~-~   97 (270)
                      .|.+++|+|+++++|..+++.+...|++++++.++++..+.+ .   ..+....   .+..+.+.   ..+++....+ .
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~---~~g~~~~---~~~~~~~~---~~~~~~~~~~~~  209 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC-K---KLAAIIL---IRYPDEEG---FAPKVKKLTGEK  209 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-H---HcCCcEE---EecCChhH---HHHHHHHHhCCC
Confidence            578999999999999999999999999988888887765544 2   2343211   22222221   2222333222 3


Q ss_pred             cccEEEECCC
Q 024230           98 KLNIFVNNVG  107 (270)
Q Consensus        98 ~id~li~~ag  107 (270)
                      .+|.++++.|
T Consensus       210 ~~d~~i~~~~  219 (334)
T PTZ00354        210 GVNLVLDCVG  219 (334)
T ss_pred             CceEEEECCc
Confidence            6999999876

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=95.60  E-value=0.078  Score=46.79  Aligned_cols=78  Identities=23%  Similarity=0.344  Sum_probs=51.9

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      .|++++|+|+ +++|..+++.+...|+ +|+.+++++++.+.+ .+   .+....   .|..+.+    ..+++.+..++
T Consensus       172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~-~~---~ga~~~---i~~~~~~----~~~~l~~~~~~  239 (351)
T cd08233         172 PGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELA-EE---LGATIV---LDPTEVD----VVAEVRKLTGG  239 (351)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HH---hCCCEE---ECCCccC----HHHHHHHHhCC
Confidence            5789999985 8999999999999999 788888887775433 22   343322   2333322    22233333323


Q ss_pred             -cccEEEECCCC
Q 024230           98 -KLNIFVNNVGT  108 (270)
Q Consensus        98 -~id~li~~ag~  108 (270)
                       .+|.++.+.|.
T Consensus       240 ~~~d~vid~~g~  251 (351)
T cd08233         240 GGVDVSFDCAGV  251 (351)
T ss_pred             CCCCEEEECCCC
Confidence             49999999874

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>PRK08655 prephenate dehydrogenase; Provisional

Probab=95.60  E-value=0.03  Score=51.24  Aligned_cols=39  Identities=28%  Similarity=0.286  Sum_probs=34.8

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHH
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNEC   60 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~   60 (270)
                      +|.|+||.|.+|.++|+.|.+.|++|.+++|+++...+.
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~   40 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEV   40 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHH
Confidence            689999999999999999999999999999988765443

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=95.60  E-value=0.11  Score=38.64  Aligned_cols=67  Identities=24%  Similarity=0.442  Sum_probs=46.5

Q ss_pred             cHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC-cccEEEECCCC
Q 024230           31 GLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG-KLNIFVNNVGT  108 (270)
Q Consensus        31 giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~-~id~li~~ag~  108 (270)
                      +||...+......|++|+.+++++++.+.    +++.|....   .|-.+.+    +.+++++..++ ++|++|.|+|.
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~----~~~~Ga~~~---~~~~~~~----~~~~i~~~~~~~~~d~vid~~g~   68 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLEL----AKELGADHV---IDYSDDD----FVEQIRELTGGRGVDVVIDCVGS   68 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHHH----HHHTTESEE---EETTTSS----HHHHHHHHTTTSSEEEEEESSSS
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHHH----HHhhccccc---ccccccc----cccccccccccccceEEEEecCc
Confidence            58999999999999999999999887644    334442222   3333332    55555555543 79999999994

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=95.54  E-value=0.15  Score=45.48  Aligned_cols=79  Identities=19%  Similarity=0.278  Sum_probs=52.5

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCH-HHHHHHHHHHHHHcC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR-PQRQTLINTVSSLFN   96 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~i~~~~~   96 (270)
                      .|.+|+|.|+ |++|..++......|+ +|+.+++++++.+.+    ++.|....   .|..+. +++.+.+.++   .+
T Consensus       187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~----~~~Ga~~~---i~~~~~~~~~~~~v~~~---~~  255 (369)
T cd08301         187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA----KKFGVTEF---VNPKDHDKPVQEVIAEM---TG  255 (369)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH----HHcCCceE---EcccccchhHHHHHHHH---hC
Confidence            5889999985 8999999998889998 799999988776543    33343222   122221 2333333332   22


Q ss_pred             CcccEEEECCCC
Q 024230           97 GKLNIFVNNVGT  108 (270)
Q Consensus        97 ~~id~li~~ag~  108 (270)
                      +.+|+++.+.|.
T Consensus       256 ~~~d~vid~~G~  267 (369)
T cd08301         256 GGVDYSFECTGN  267 (369)
T ss_pred             CCCCEEEECCCC
Confidence            479999999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=95.53  E-value=0.73  Score=40.18  Aligned_cols=113  Identities=13%  Similarity=0.128  Sum_probs=68.3

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCC--eEEEeeCChhHHHHHHHHHHhcC-----CeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTETELNECIHHLQMKG-----LKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      +|.|.|+ |.+|.++|..++.+|.  +++|++.+++..+....++....     ..+.+..   .+       .+++   
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~---~~-------y~~~---   66 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRA---GD-------YDDC---   66 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEE---CC-------HHHh---
Confidence            3678898 9999999999999985  69999998887666555555421     1222222   12       1111   


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCc
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSA  158 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~  158 (270)
                        ..-|++|..||.... |  ..+.+ =.+.+..|..    +++.+.|.+.+.....++.+.|.
T Consensus        67 --~~aDivvitaG~~~k-p--g~tr~-R~dll~~N~~----I~~~i~~~i~~~~p~~i~ivvsN  120 (307)
T cd05290          67 --ADADIIVITAGPSID-P--GNTDD-RLDLAQTNAK----IIREIMGNITKVTKEAVIILITN  120 (307)
T ss_pred             --CCCCEEEECCCCCCC-C--CCCch-HHHHHHHHHH----HHHHHHHHHHHhCCCeEEEEecC
Confidence              578999999997432 2  12310 1234555544    55555666666654444444443

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK07877 hypothetical protein; Provisional

Probab=95.53  E-value=0.11  Score=50.48  Aligned_cols=82  Identities=13%  Similarity=0.129  Sum_probs=58.1

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCC--eEEEeeCCh------------------hHHHHHHHHHHhc--CCeEEE
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTE------------------TELNECIHHLQMK--GLKVTG   73 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~--~v~l~~r~~------------------~~~~~~~~~~~~~--~~~~~~   73 (270)
                      -.|++++|+|.|. | +|..++..|+..|-  ++.+++.+.                  .+.+..++.+.+.  ..++..
T Consensus       103 ~~L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~  180 (722)
T PRK07877        103 ERLGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEV  180 (722)
T ss_pred             HHHhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEE
Confidence            4688899999999 4 99999999999994  788887742                  2334444445443  356776


Q ss_pred             EEccCCCHHHHHHHHHHHHHHcCCcccEEEECCCC
Q 024230           74 SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGT  108 (270)
Q Consensus        74 ~~~D~~~~~~~~~~~~~i~~~~~~~id~li~~ag~  108 (270)
                      +...++ ++++.+++        ..+|++|.|.-.
T Consensus       181 ~~~~i~-~~n~~~~l--------~~~DlVvD~~D~  206 (722)
T PRK07877        181 FTDGLT-EDNVDAFL--------DGLDVVVEECDS  206 (722)
T ss_pred             EeccCC-HHHHHHHh--------cCCCEEEECCCC
Confidence            766666 45565555        467888888763

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=95.52  E-value=0.1  Score=46.48  Aligned_cols=75  Identities=20%  Similarity=0.271  Sum_probs=49.3

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      .|++|+|.|+ |++|..++......|++|++++.+.++..+..+   +.|....   .|..+.+.       +.+.. +.
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~---~~Ga~~v---i~~~~~~~-------~~~~~-~~  247 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAIN---RLGADSF---LVSTDPEK-------MKAAI-GT  247 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHH---hCCCcEE---EcCCCHHH-------HHhhc-CC
Confidence            6889999765 899999999988999998888777665443333   2343222   13233222       22222 46


Q ss_pred             ccEEEECCCC
Q 024230           99 LNIFVNNVGT  108 (270)
Q Consensus        99 id~li~~ag~  108 (270)
                      +|++|.+.|.
T Consensus       248 ~D~vid~~g~  257 (360)
T PLN02586        248 MDYIIDTVSA  257 (360)
T ss_pred             CCEEEECCCC
Confidence            8999999883

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=95.51  E-value=0.15  Score=41.39  Aligned_cols=37  Identities=19%  Similarity=0.395  Sum_probs=31.2

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCC
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRT   53 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~   53 (270)
                      -.|++.+|+|.|.++ +|.++++.|+..|. ++.++|.+
T Consensus        15 ~~L~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d   52 (198)
T cd01485          15 NKLRSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHR   52 (198)
T ss_pred             HHHhhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECC
Confidence            357788999997765 99999999999997 48888765

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=95.51  E-value=0.17  Score=38.68  Aligned_cols=77  Identities=14%  Similarity=0.242  Sum_probs=48.5

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCCh-------------------hHHHHHHHHHHhcC--CeEEEEEccCC
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTE-------------------TELNECIHHLQMKG--LKVTGSVCDVS   79 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~-------------------~~~~~~~~~~~~~~--~~~~~~~~D~~   79 (270)
                      +|+|.|. ||+|..+++.|+..|. ++.+++.+.                   .+.+.+.+.+++..  .++..+..++.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~   79 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS   79 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence            4788886 8999999999999998 688887652                   22334444454443  34444444443


Q ss_pred             CHHHHHHHHHHHHHHcCCcccEEEECCCC
Q 024230           80 SRPQRQTLINTVSSLFNGKLNIFVNNVGT  108 (270)
Q Consensus        80 ~~~~~~~~~~~i~~~~~~~id~li~~ag~  108 (270)
                      +...        .+.+ .+.|++|.+...
T Consensus        80 ~~~~--------~~~~-~~~diVi~~~d~   99 (143)
T cd01483          80 EDNL--------DDFL-DGVDLVIDAIDN   99 (143)
T ss_pred             hhhH--------HHHh-cCCCEEEECCCC
Confidence            3211        2222 578888888753

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK06223 malate dehydrogenase; Reviewed

Probab=95.49  E-value=0.15  Score=44.26  Aligned_cols=113  Identities=10%  Similarity=0.104  Sum_probs=65.0

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcC----CeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKG----LKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      ++|.|+|+ |.+|..+|..++..|. +|++++++++.++.....+....    .... +.. -++   .+ .+       
T Consensus         3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~-i~~-~~d---~~-~~-------   68 (307)
T PRK06223          3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTK-ITG-TND---YE-DI-------   68 (307)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcE-EEe-CCC---HH-HH-------
Confidence            58999999 9999999999999875 89999998877654443333221    0111 110 011   11 12       


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCc
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSA  158 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~  158 (270)
                       ...|++|.++|.... +  ..+.   .+.+..|+-    +.+.+.+.+.+.. .+.+|+++-.
T Consensus        69 -~~aDiVii~~~~p~~-~--~~~r---~~~~~~n~~----i~~~i~~~i~~~~~~~~viv~tNP  121 (307)
T PRK06223         69 -AGSDVVVITAGVPRK-P--GMSR---DDLLGINAK----IMKDVAEGIKKYAPDAIVIVVTNP  121 (307)
T ss_pred             -CCCCEEEECCCCCCC-c--CCCH---HHHHHHHHH----HHHHHHHHHHHHCCCeEEEEecCc
Confidence             578999999987432 1  1222   233444443    3444444444443 3456666543

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=95.48  E-value=0.14  Score=45.91  Aligned_cols=75  Identities=21%  Similarity=0.277  Sum_probs=49.7

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      .|++++|.|+ |++|..++......|++|+++++++++..+..+   +.|....   .|..+.+       .+.+.. +.
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~---~lGa~~~---i~~~~~~-------~v~~~~-~~  242 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAID---RLGADSF---LVTTDSQ-------KMKEAV-GT  242 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHH---hCCCcEE---EcCcCHH-------HHHHhh-CC
Confidence            5889999876 899999999999999999988877654333332   3343322   2333322       222222 46


Q ss_pred             ccEEEECCCC
Q 024230           99 LNIFVNNVGT  108 (270)
Q Consensus        99 id~li~~ag~  108 (270)
                      +|+++.+.|.
T Consensus       243 ~D~vid~~G~  252 (375)
T PLN02178        243 MDFIIDTVSA  252 (375)
T ss_pred             CcEEEECCCc
Confidence            9999999874

>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.47  E-value=0.029  Score=48.21  Aligned_cols=45  Identities=24%  Similarity=0.220  Sum_probs=39.0

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELN   58 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~   58 (270)
                      +..+++||.++|.|-|.-+|+-++..|.++|+.|.++....+.++
T Consensus       154 ~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T~~l~  198 (294)
T PRK14187        154 ITRNLSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSATRDLA  198 (294)
T ss_pred             hCCCCCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCCCCCHH
Confidence            457899999999999999999999999999999998876554433

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=95.46  E-value=0.039  Score=44.41  Aligned_cols=39  Identities=21%  Similarity=0.164  Sum_probs=35.9

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCC
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRT   53 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~   53 (270)
                      ..+++||.++|.|-|.-+|+-++..|.++|+.|.+++.+
T Consensus        57 ~~~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~   95 (197)
T cd01079          57 GNRLYGKTITIINRSEVVGRPLAALLANDGARVYSVDIN   95 (197)
T ss_pred             CCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecC
Confidence            458999999999999999999999999999999998643

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1

Probab=95.46  E-value=0.057  Score=44.91  Aligned_cols=36  Identities=22%  Similarity=0.256  Sum_probs=31.9

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEE-EeeC
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVH-TCSR   52 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~-l~~r   52 (270)
                      .+|++++++|.| .|.+|+.+++.|.+.|++|+ +.++
T Consensus        27 ~~l~~~~v~I~G-~G~VG~~~a~~L~~~g~~vv~v~D~   63 (227)
T cd01076          27 IGLAGARVAIQG-FGNVGSHAARFLHEAGAKVVAVSDS   63 (227)
T ss_pred             CCccCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECC
Confidence            578999999998 69999999999999999988 4454

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=95.45  E-value=0.1  Score=45.47  Aligned_cols=78  Identities=15%  Similarity=0.187  Sum_probs=51.6

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC-C
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN-G   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~-~   97 (270)
                      .|.+++|.|+++.+|..+++.....|++|+.+++++++.+.+ +   +.+... .+  +..+. +..   +.+....+ .
T Consensus       140 ~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~-~---~~g~~~-~~--~~~~~-~~~---~~~~~~~~~~  208 (327)
T PRK10754        140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRA-K---KAGAWQ-VI--NYREE-NIV---ERVKEITGGK  208 (327)
T ss_pred             CCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-H---HCCCCE-EE--cCCCC-cHH---HHHHHHcCCC
Confidence            578999999999999999999999999999998887765433 2   234322 22  22221 222   22222222 3


Q ss_pred             cccEEEECCC
Q 024230           98 KLNIFVNNVG  107 (270)
Q Consensus        98 ~id~li~~ag  107 (270)
                      .+|+++++.+
T Consensus       209 ~~d~vl~~~~  218 (327)
T PRK10754        209 KVRVVYDSVG  218 (327)
T ss_pred             CeEEEEECCc
Confidence            6999998876

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	270
1xq1_A	266	X-Ray Structure Of Putative Tropinone Reducatse Fro		1e-97
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		6e-81
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		3e-75
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		3e-75
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		5e-38
4b79_A	242	The Aeropath Project And Pseudomonas Aeruginosa Hig		5e-33
4ibo_A	271	Crystal Structure Of A Putative Gluconate Dehydroge		3e-31
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		5e-31
1x1e_A	239	Crystal Structure Of Tt0495 Protein From Thermus Th		1e-30
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		2e-30
3awd_A	260	Crystal Structure Of Gox2181 Length = 260		3e-30
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		3e-30
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		1e-29
4iin_A	271	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		2e-29
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		9e-29
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		1e-28
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		2e-28
2wdz_A	254	Crystal Structure Of The Short Chain Dehydrogenase		9e-28
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-27
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		4e-27
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		5e-27
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		1e-26
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-26
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-26
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		5e-26
2pd6_A	264	Structure Of Human Hydroxysteroid Dehydrogenase Typ		7e-26
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		7e-26
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		1e-25
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		2e-25
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		2e-25
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		2e-25
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		2e-25
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		3e-25
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		4e-25
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		4e-25
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		5e-25
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		9e-25
3i3o_A	291	2.06 Angstrom Resolution Crystal Structure Of A Sho		2e-24
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		2e-24
3uf0_A	273	Crystal Structure Of A Putative Nad(P) Dependent Gl		2e-24
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		3e-24
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		3e-24
3gaf_A	256	2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De		3e-24
1rwb_A	261	Cooperative Effect Of Two Surface Amino Acid Mutati		3e-24
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		4e-24
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		4e-24
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		5e-24
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		6e-24
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		7e-24
3ijr_A	291	2.05 Angstrom Resolution Crystal Structure Of A Sho		7e-24
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		8e-24
1g6k_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant E		8e-24
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		8e-24
1gee_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant Q		1e-23
1gco_A	261	Crystal Structure Of Glucose Dehydrogenase Complexe		1e-23
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		1e-23
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		2e-23
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		2e-23
1h5q_A	265	Mannitol Dehydrogenase From Agaricus Bisporus Lengt		2e-23
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		3e-23
4hp8_A	247	Crystal Structure Of A Putative 2-Deoxy-D-Gluconate		4e-23
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		4e-23
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		4e-23
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		5e-23
3tzq_B	271	Crystal Structure Of A Short-Chain Type Dehydrogena		8e-23
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		1e-22
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		2e-22
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		2e-22
3ay6_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		3e-22
3aus_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		4e-22
3ay7_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		4e-22
3ak4_A	263	Crystal Structure Of Nadh-Dependent Quinuclidinone		4e-22
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		1e-21
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		1e-21
1cyd_A	244	Carbonyl Reductase Complexed With Nadph And 2-Propa		1e-21
3gdf_A	267	Crystal Structure Of The Nadp-Dependent Mannitol De		1e-21
1o5i_A	249	Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei		1e-21
3vtz_A	269	Structure Of Thermoplasma Volcanium Aldohexose Dehy		1e-21
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		2e-21
2d1y_A	256	Crystal Structure Of Tt0321 From Thermus Thermophil		3e-21
3oic_A	258	Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl		4e-21
2ph3_A	245	Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei		4e-21
2hsd_A	253	The Refined Three-Dimensional Structure Of 3alpha,2		7e-21
3v2g_A	271	Crystal Structure Of A DehydrogenaseREDUCTASE FROM		7e-21
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		8e-21
1iy8_A	267	Crystal Structure Of Levodione Reductase Length = 2		8e-21
3grp_A	266	2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-		1e-20
4dml_A	269	3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn		1e-20
3gk3_A	269	Crystal Structure Of Acetoacetyl-Coa Reductase From		1e-20
3d3w_A	244	Structure Of L-Xylulose Reductase With Bound Coenzy		1e-20
1zem_A	262	Crystal Structure Of Nad+-Bound Xylitol Dehydrogena		1e-20
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		1e-20
1pr9_A	244	Human L-Xylulose Reductase Holoenzyme Length = 244		1e-20
1nff_A	260	Crystal Structure Of Rv2002 Gene Product From Mycob		2e-20
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		3e-20
1uzl_A	247	Maba From Mycobacterium Tuberculosis Length = 247		3e-20
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		5e-20
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		5e-20
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		7e-20
3ctm_A	279	Crystal Structure Of A Carbonyl Reductase From Cand		8e-20
2ntn_A	267	Crystal Structure Of Maba-c60v/g139a/s144l Length =		9e-20
1uzm_A	247	Maba From Mycobacterium Tuberculosis Length = 247		1e-19
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		1e-19
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		1e-19
3icc_A	255	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car		1e-19
3d3w_B	245	Structure Of L-Xylulose Reductase With Bound Coenzy		1e-19
1hdc_A	254	Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste		2e-19
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		3e-19
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		3e-19
1nfr_A	260	Rv2002 Gene Product From Mycobacterium Tuberculosis		4e-19
3gvc_A	277	Crystal Structure Of Probable Short-Chain Dehydroge		4e-19
3v2h_A	281	The Crystal Structure Of D-Beta-Hydroxybutyrate Deh		4e-19
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-18
1uls_A	245	Crystal Structure Of Tt0140 From Thermus Thermophil		1e-18
4eso_A	255	Crystal Structure Of A Putative Oxidoreductase Prot		2e-18
3vc7_A	254	Crystal Structure Of A Putative Oxidoreductase From		2e-18
3a28_C	258	Crystal Structure Of L-2,3-Butanediol Dehydrogenase		3e-18
3lf1_A	265	Apo Structure Of The Short Chain Oxidoreductase Q9h		4e-18
3uxy_A	266	The Crystal Structure Of Short Chain Dehydrogenase		4e-18
1w6u_A	302	Structure Of Human Decr Ternary Complex Length = 30		6e-18
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		6e-18
3o38_A	266	Crystal Structure Of A Short Chain Dehydrogenase Fr		7e-18
4fgs_A	273	Crystal Structure Of A Probable Dehydrogenase Prote		1e-17
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		1e-17
3v8b_A	283	Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro		1e-17
2dtd_A	264	Structure Of Thermoplasma Acidophilum Aldohexose De		1e-17
2zk7_A	257	Structure Of A C-Terminal Deletion Mutant Of Thermo		1e-17
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		2e-17
4iiu_A	267	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		2e-17
1ybv_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		3e-17
1doh_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		3e-17
3i4f_A	264	Structure Of Putative 3-oxoacyl-reductase From Baci		3e-17
1w73_A	302	Binary Structure Of Human Decr Solved By Semet Sad.		5e-17
3un1_A	260	Crystal Structure Of An Oxidoreductase From Sinorhi		5e-17
4e4y_A	244	The Crystal Structure Of A Short Chain Dehydrogenas		1e-16
1hxh_A	253	Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID D		1e-16
2bgk_A	278	X-Ray Structure Of Apo-Secoisolariciresinol Dehydro		1e-16
4egf_A	266	Crystal Structure Of A L-Xylulose Reductase From My		2e-16
1geg_A	256	Cryatal Structure Analysis Of Meso-2,3-Butanediol D		2e-16
3u0b_A	454	Crystal Structure Of An Oxidoreductase From Mycobac		6e-16
2a4k_A	263	3-Oxoacyl-[acyl Carrier Protein] Reductase From The		6e-16
3pgx_A	280	Crystal Structure Of A Putative Carveol Dehydrogena		7e-16
4fc6_A	277	Studies On Dcr Shed New Light On Peroxisomal Beta-O		8e-16
3tsc_A	277	Crystal Structure Of Short Chain Dehydrogenase Map_		9e-16
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		1e-15
4imr_A	275	Crystal Structure Of 3-oxoacyl (acyl-carrier-protei		1e-15
3afm_A	258	Crystal Structure Of Aldose Reductase A1-R Responsi		2e-15
1yde_A	270	Crystal Structure Of Human Retinal Short-Chain Dehy		3e-15
3imf_A	257	1.99 Angstrom Resolution Crystal Structure Of A Sho		3e-15
3tox_A	280	Crystal Structure Of A Short Chain Dehydrogenase In		3e-15
1bdb_A	277	Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From		5e-15
3is3_A	270	Crystal Structure Of 17beta-Hydroxysteroid Dehydrog		6e-15
3t4x_A	267	Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU		6e-15
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		7e-15
3s55_A	281	Crystal Structure Of A Putative Short-Chain Dehydro		7e-15
2y93_A	281	Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2		8e-15
3ezl_A	256	Crystal Structure Of Acetyacetyl-Coa Reductase From		1e-14
1fjh_A	257	The Crystal Structure Of 3-Alpha-Hydroxysteroid Deh		2e-14
3sx2_A	278	Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Ca		2e-14
3itd_A	270	Crystal Structure Of An Inactive 17beta-Hydroxyster		2e-14
3ndr_A	247	Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro		3e-14
2z1n_A	260	Crystal Structure Of Ape0912 From Aeropyrum Pernix		4e-14
2ag5_A	246	Crystal Structure Of Human Dhrs6 Length = 246		4e-14
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		6e-14
3r3s_A	294	Structure Of The Ygha Oxidoreductase From Salmonell		9e-14
2o23_A	265	The Structure Of Wild-Type Human Hadh2 (17beta-Hydr		1e-13
2dkn_A	255	Crystal Structure Of The 3-alpha-hydroxysteroid Deh		2e-13
1so8_A	261	Abeta-bound Human Abad Structure [also Known As 3-h		2e-13
1u7t_A	261	Crystal Structure Of AbadHSD10 WITH A BOUND INHIBIT		2e-13
2fwm_X	250	Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodih		4e-13
3tjr_A	301	Crystal Structure Of A Rv0851c Ortholog Short Chain		6e-13
3t7c_A	299	Crystal Structure Of Carveol Dehydrogenase From Myc		1e-12
1pwx_A	254	Crystal Structure Of The Haloalcohol Dehalogenase H		1e-12
2ehd_A	234	Crystal Structure Analysis Of Oxidoreductase Length		2e-12
3svt_A	281	Structure Of A Short-Chain Type DehydrogenaseREDUCT		2e-12
4e3z_A	272	Crystal Structure Of A Oxidoreductase From Rhizobiu		2e-12
1ulu_A	261	Crystal Structure Of Tt0143 From Thermus Thermophil		3e-12
1e3s_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		4e-12
2yw9_A	261	Crystal Structure Of Tt0143 From Thermus Thermophil		4e-12
1e6w_A	260	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		4e-12
2jap_A	247	Clavulanic Acid Dehydrogenase: Structural And Bioch		4e-12
4iqg_C	271	Crystal Structure Of Bpro0239 Oxidoreductase From P		1e-11
1e3w_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		1e-11
4gkb_A	258	Crystal Structure Of A Short Chain Dehydrogenase Ho		2e-11
4fw8_A	454	Crystal Structure Of Fabg4 Complexed With Coenzyme		2e-11
3v1t_C	462	Crystal Structure Of A Putative Ketoacyl Reductase		2e-11
3q6i_A	446	Crystal Structure Of Fabg4 And Coenzyme Binary Comp		2e-11
3m1l_A	432	Crystal Strucutre Of A C-Terminal Trunacted Mutant		2e-11
3lls_A	475	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-11
3ged_A	247	Fingerprint And Structural Analysis Of A Apo Scor E		4e-11
4e6p_A	259	Crystal Structure Of A Probable Sorbitol Dehydrogen		4e-11
1zbq_A	327	Crystal Structure Of Human 17-beta-hydroxysteroid D		6e-11
3ksu_A	262	Crystal Structure Of Short-Chain Dehydrogenase From		1e-10
2jah_A	247	Biochemical And Structural Analysis Of The Clavulan		1e-10
4ixt_A	254	Structure Of A 37-fold Mutant Of Halohydrin Dehalog		1e-10
3edm_A	259	Crystal Structure Of A Short Chain Dehydrogenase Fr		2e-10
1zmo_A	244	Apo Structure Of Haloalcohol Dehalogenase Hhea Of A		2e-10
4h15_A	261	Crystal Structure Of A Short Chain Alcohol Dehydrog		3e-10
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		4e-10
3uve_A	286	Crystal Structure Of Carveol Dehydrogenase ((+)-Tra		6e-10
1gz6_A	319	(3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat		1e-09
1ja9_A	274	Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen		1e-09
4da9_A	280	Crystal Structure Of Putative Short-Chain Dehydroge		1e-09
1p33_A	289	Pteridine Reductase From Leishmania Tarentolae Comp		1e-09
3oif_A	266	Crystal Structure Of Enoyl-Acp Reductases I (Fabi)		2e-09
3rku_A	287	Substrate Fingerprint And The Structure Of Nadp+ De		4e-09
1e92_A	288	Pteridine Reductase 1 From Leishmania Major Complex		5e-09
1e7w_A	291	One Active Site, Two Modes Of Reduction Correlate T		5e-09
2qhx_A	328	Structure Of Pteridine Reductase From Leishmania Ma		5e-09
1w0c_A	307	Inhibition Of Leishmania Major Pteridine Reductase		6e-09
3ucx_A	264	The Structure Of A Short Chain Dehydrogenase From M		6e-09
2bd0_A	244	Chlorobium Tepidum Sepiapterin Reductase Complexed		6e-09
2nwq_A	272	Short Chain Dehydrogenase From Pseudomonas Aerugino		7e-09
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		1e-08
3ioy_A	319	Structure Of Putative Short-Chain Dehydrogenase (Sa		2e-08
2xox_A	288	Crystal Structure Of Pteridine Reductase (Ptr1) Fro		4e-08
3m1a_A	281	The Crystal Structure Of A Short-Chain Dehydrogenas		5e-08
3asu_A	248	Crystal Structure Of Serine Dehydrogenase From Esch		7e-08
2qq5_A	260	Crystal Structure Of Human Sdr Family Member 1 Leng		7e-08
4fs3_A	256	Crystal Structure Of Staphylococcus Aureus Enoyl-Ac		8e-08
1wma_A	276	Crystal Structure Of Human Cbr1 In Complex With Hyd		1e-07
3pxx_A	287	Crystal Structure Of Carveol Dehydrogenase From Myc		1e-07
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		1e-07
3tpc_A	257	Crystal Structure Of A Hypothtical Protein Sma1452		2e-07
4all_A	277	Crystal Structure Of S. Aureus Fabi In Complex With		2e-07
3gns_A	260	Crystal Structure Of The Staphylococcus Aureus Enoy		3e-07
3gnt_A	256	Crystal Structure Of The Staphylococcus Aureus Enoy		3e-07
3tl3_A	257	Structure Of A Short-Chain Type DehydrogenaseREDUCT		3e-07
4ali_A	282	Crystal Structure Of S. Aureus Fabi In Complex With		3e-07
2p91_A	285	Crystal Structure Of Enoyl-[acyl-Carrier-Protein] R		4e-07
3e03_A	274	Crystal Structure Of A Putative Dehydrogenase From		5e-07
3kzv_A	254	The Crystal Structure Of A Cytoplasmic Protein With		5e-07
3g1t_A	258	Crystal Structure Of Short Chain Dehydrogenase From		6e-07
1mxf_A	276	Crystal Structure Of Inhibitor Complex Of Putative		7e-07
4bb6_A	292	Free-Wilson And Structural Approaches To Co-Optimis		1e-06
3bmc_A	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		1e-06
4bb5_A	292	Free-Wilson And Structural Approaches To Co-Optimis		1e-06
3pdj_A	273	Crystal Structure Of Human 11-Beta-Hydroxysteroid D		1e-06
3bmc_B	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		1e-06
4hfr_A	272	Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In		1e-06
1mxh_A	276	Crystal Structure Of Substrate Complex Of Putative		1e-06
2wd7_A	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		1e-06
3d5q_A	272	Crystal Structure Of 11b-Hsd1 In Complex With Triaz		1e-06
1xu7_A	286	Crystal Structure Of The Interface Open Conformatio		1e-06
2irw_A	264	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		1e-06
1yb1_A	272	Crystal Structure Of Human 17-Beta-Hydroxysteroid D		2e-06
2bel_A	283	Structure Of Human 11-Beta-Hydroxysteroid Dehydroge		2e-06
2rbe_A	275	The Discovery Of 2-Anilinothiazolones As 11beta-Hsd		2e-06
2ilt_A	275	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		2e-06
3jq7_A	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		2e-06
3ch6_A	286	Crystal Structure Of 11beta-Hsd1 Double Mutant (L26		2e-06
2c7v_A	268	Structure Of Trypanosoma Brucei Pteridine Reductase		2e-06
3qlj_A	322	Crystal Structure Of A Short Chain Dehydrogenase Fr		2e-06
2wd7_B	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		2e-06
2pfg_A	276	Crystal Structure Of Human Cbr1 In Complex With Big		2e-06
3jq7_B	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		2e-06
3f1l_A	252	The 0.95 A Structure Of An Oxidoreductase, Ycik Fro		3e-06
3p19_A	266	Improved Nadph-Dependent Blue Fluorescent Protein L		5e-06
3kvo_A	346	Crystal Structure Of The Catalytic Domain Of Human		5e-06
3f5q_A	262	Crystal Structure Of Putative Short Chain Dehydroge		6e-06
3gmd_A	264	Structure-Based Design Of 7-Azaindole-Pyrrolidines		7e-06
3f5s_A	255	Crystal Structure Of Putatitve Short Chain Dehydrog		8e-06
1xg5_A	279	Structure Of Human Putative Dehydrogenase Mgc4172 I		8e-06
1cwu_A	296	Brassica Napus Enoyl Acp Reductase A138g Mutant Com		9e-06
1d7o_A	297	Crystal Structure Of Brassica Napus Enoyl Acyl Carr		1e-05
1eno_A	312	Brassica Napus Enoyl Acp ReductaseNAD BINARY COMPLE		1e-05
3ppi_A	281	Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenas		1e-05
1n5d_A	288	Crystal Structure Of Porcine Testicular Carbonyl Re		1e-05
1y5m_A	276	The Crystal Structure Of Murine 11b-Hydroxysteroid		2e-05
1uay_A	242	Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa Dehy		2e-05
3i1j_A	247	Structure Of A Putative Short Chain Dehydrogenase F		2e-05
1xse_A	295	Crystal Structure Of Guinea Pig 11beta-Hydroxystero		3e-05
3lz6_A	263	Guinea Pig 11beta Hydroxysteroid Dehydrogenase With		3e-05
3g49_A	277	N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-		3e-05
3e9n_A	245	Crystal Structure Of A Putative Short-Chain Dehydro		4e-05
3dwf_A	276	Crystal Structure Of The Guinea Pig 11beta-Hydroxys		4e-05
1qsg_A	265	Crystal Structure Of Enoyl Reductase Inhibition By		4e-05
3ojf_A	257	Crystal Structure Of The Bacillus Cereus Enoyl-Acyl		4e-05
1dfg_A	261	X-Ray Structure Of Escherichia Coli Enoyl Reductase		5e-05
1c14_A	262	Crystal Structure Of E Coli Enoyl Reductase-nad+-tr		5e-05
2qio_A	256	X-Ray Structure Of Enoyl-Acyl Carrier Protein Reduc		5e-05
3ek2_A	271	Crystal Structure Of Eonyl-(Acyl Carrier Protein) R		8e-05
3pjf_A	270	Structure Of Enr G93v Mutant-Nad+-Triclosan Complex		8e-05
3nrc_A	280	Crystal Stucture Of The Francisella Tularensis Enoy		8e-05
3iah_A	256	Crystal Structure Of Short Chain Dehydrogenase (yci		9e-05
2jjy_A	268	Crystal Structure Of Francisella Tularensis Enoyl R		9e-05
2hrb_A	274	Crystal Structure Of Human Carbonyl Reductase 3, Co		2e-04
3sc4_A	285	Crystal Structure Of A Short Chain Dehydrogenase (A		2e-04
3uce_A	223	Crystal Structure Of A Small-Chain Dehydrogenase In		2e-04
3pjd_A	270	Structure Of Enr G93a Mutant-Nad+-Triclosan Complex		3e-04
3tn7_A	257	Crystal Structure Of Short-Chain Alcohol Dehydrogen		3e-04
3f1k_A	252	Crystal Structure Of Ycik From E. Coli, An Oxidored		3e-04
3pje_A	270	Structure Of Enr G93s Mutant-Nad+-Triclosan Complex		3e-04
4dry_A	281	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		3e-04
3l77_A	235	X-Ray Structure Alcohol Dehydrogenase From Archaeon		5e-04
3uwr_A	286	Crystal Structure Of Carveol Dehydrogenase From Myc		5e-04
3gem_A	260	Crystal Structure Of Short-Chain Dehydrogenase From		6e-04
2ptg_A	319	Crystal Structure Of Eimeria Tenella Enoyl Reductas		6e-04
3e9q_A	273	Crystal Structure Of The Short Chain Dehydrogenase		6e-04

>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266

Iteration: 1
 Score =  352 bits (903), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 164/258 (63%), Positives = 201/258 (77%), Gaps = 1/258 (0%)
Query: 12  RQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKV 71
           +  RWSL+  T LVTGGTKG+G A+VEE +  GA +HTC+R E ELNEC+   Q KG +V
Sbjct: 6   QSQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQV 65
Query: 72  TGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFE 131
           TGSVCD S RP+R+ L+ TVSS+F GKL+I +NN+G    KPTL+Y AEDFS  +STN E
Sbjct: 66  TGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLE 125
Query: 132 SAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKD 191
           SA+HL QLAHPLL+ASG  +I+ MSS  G+VSA+VG++YSATKGA+NQLA+NLACEWA D
Sbjct: 126 SAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASD 185
Query: 192 NIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI 251
            IR N+VAP  I TP  E +  + +F   V SR P+GR GEP+EVSSLVAFLCMPAASYI
Sbjct: 186 GIRANAVAPAVIATPLAEAVY-DDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYI 244
Query: 252 TGQTVCIDGGFTVNGFFF 269
           TGQT+C+DGG TVNGF +
Sbjct: 245 TGQTICVDGGLTVNGFSY 262

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score =  296 bits (759), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 140/262 (53%), Positives = 190/262 (72%), Gaps = 4/262 (1%)
Query: 11  SRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLK 70
           + + RWSL+G TALVTGG+KG+G A+VEEL+ LGA V+TCSR E EL+EC+   + KGL 
Sbjct: 12  NNEGRWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLN 71
Query: 71  VTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNF 130
           V GSVCD+ SR +R  L+ TV+ +F+GKLNI VNN G  + K   ++  +D++++M TNF
Sbjct: 72  VEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNF 131
Query: 131 ESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAK 190
           E+A+HL Q+A+PLL+AS   +++ +SS  G  +    ++YSA+KGA+NQ+ K+LACEWAK
Sbjct: 132 EAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAK 191
Query: 191 DNIRTNSVAPWYIRTPFTEPLLGNG----KFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP 246
           DNIR NSVAP  I TP  E  +       + +D    +TPMGR G+P+EVS+L+AFLC P
Sbjct: 192 DNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFP 251
Query: 247 AASYITGQTVCIDGGFTVNGFF 268
           AASYITGQ +  DGGFT NG F
Sbjct: 252 AASYITGQIIWADGGFTANGGF 273

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score =  278 bits (710), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 132/257 (51%), Positives = 181/257 (70%), Gaps = 3/257 (1%)
Query: 15  RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGS 74
           RW+L+G TALVTGG++G+G  +VEEL+ LGA+V+TCSR + ELN+C+   + KG KV  S
Sbjct: 4   RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEAS 63
Query: 75  VCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAF 134
           VCD+SSR +RQ L+NTV++ F+GKLNI VNN G  + K   +Y  ED+SL+MS NFE+A+
Sbjct: 64  VCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAY 123
Query: 135 HLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIR 194
           HL  LAHP L+AS   ++V +SS  G ++     VY ATKGAM+QL + LA EWAKDNIR
Sbjct: 124 HLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIR 183
Query: 195 TNSVAPWYIRTPFTEPLLGN---GKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI 251
            N V P  I T   E  + +    + ++++  R  + R+GEPKE++++VAFLC PAASY+
Sbjct: 184 VNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYV 243
Query: 252 TGQTVCIDGGFTVNGFF 268
           TGQ + +DGG   N  F
Sbjct: 244 TGQIIYVDGGLMANCGF 260

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score =  278 bits (710), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 132/257 (51%), Positives = 181/257 (70%), Gaps = 3/257 (1%)
Query: 15  RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGS 74
           RW+L+G TALVTGG++G+G  +VEEL+ LGA+V+TCSR + ELN+C+   + KG KV  S
Sbjct: 3   RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEAS 62
Query: 75  VCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAF 134
           VCD+SSR +RQ L+NTV++ F+GKLNI VNN G  + K   +Y  ED+SL+MS NFE+A+
Sbjct: 63  VCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAY 122
Query: 135 HLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIR 194
           HL  LAHP L+AS   ++V +SS  G ++     VY ATKGAM+QL + LA EWAKDNIR
Sbjct: 123 HLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIR 182
Query: 195 TNSVAPWYIRTPFTEPLLGN---GKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI 251
            N V P  I T   E  + +    + ++++  R  + R+GEPKE++++VAFLC PAASY+
Sbjct: 183 VNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYV 242
Query: 252 TGQTVCIDGGFTVNGFF 268
           TGQ + +DGG   N  F
Sbjct: 243 TGQIIYVDGGLMANCGF 259

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score =  154 bits (389), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 87/253 (34%), Positives = 137/253 (54%), Gaps = 5/253 (1%)
Query: 16  WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK-GLKVTGS 74
           + L+G  ALVTGG++GLG  + + L+  G +V   SR   E +E    L  K G++    
Sbjct: 17  FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAF 76
Query: 75  VCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAF 134
            CDVS+  + + L+  V   F GKL+  VN  G +   P  E+  ++F  V+  N    +
Sbjct: 77  RCDVSNYEEVKKLLEAVKEKF-GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTY 135
Query: 135 HLCQLAHPLLRASGAASIVLMSS--ALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDN 192
           ++C+ A  LLR S   SI+ + S     +   N+ + Y+A+KG +  L K LA EW +  
Sbjct: 136 YVCREAFSLLRESDNPSIINIGSLTVEEVTMPNI-SAYAASKGGVASLTKALAKEWGRYG 194
Query: 193 IRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT 252
           IR N +AP + RT  TE +  + + +D +  R P+GR G P+++  +  FL    A Y+T
Sbjct: 195 IRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKYVT 254
Query: 253 GQTVCIDGGFTVN 265
           GQ + +DGG+T N
Sbjct: 255 GQIIFVDGGWTAN 267

>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242

Iteration: 1
 Score =  137 bits (346), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 82/243 (33%), Positives = 125/243 (51%), Gaps = 14/243 (5%)
Query: 20  GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVS 79
           G   LVTGG+ G+G A+  + + LGA V         ++   H       ++     D++
Sbjct: 11  GQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHP------RIRREELDIT 64
Query: 80  SRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQL 139
              + Q L   +      +L++ VNN G S  +   EY+   F  V+  N  +A    QL
Sbjct: 65  DSQRLQRLFEALP-----RLDVLVNNAGIS--RDREEYDLATFERVLRLNLSAAMLASQL 117
Query: 140 AHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVA 199
           A PLL   G  SI+ ++S      +     YSA+KGA+ QL ++LACE+A + IR N++A
Sbjct: 118 ARPLLAQRGG-SILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACEYAAERIRVNAIA 176
Query: 200 PWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCID 259
           P +I TP    L  + +    +  RTP+ R GE  EV+S  AFLC P AS++TG  + +D
Sbjct: 177 PGWIDTPLGAGLKADVEATRRIMQRTPLARWGEAPEVASAAAFLCGPGASFVTGAVLAVD 236
Query: 260 GGF 262
           GG+
Sbjct: 237 GGY 239

>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271

Iteration: 1
 Score =  132 bits (331), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 126/256 (49%), Gaps = 5/256 (1%)
Query: 9   SHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG 68
           S S Q  + L G TALVTG ++GLG A+ E L++ GA +       + + + +   +  G
Sbjct: 15  SMSNQIIFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVG 74
Query: 69  LKVTGSVCDVSSRPQRQTLINTVSSLFNG--KLNIFVNNVGTSVLKPTLEYNAEDFSLVM 126
                   DV+S  +   +I   + L      ++I VNN G    KP +E    D+  V+
Sbjct: 75  HDAEAVAFDVTSESE---IIEAFARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVI 131
Query: 127 STNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLAC 186
            TN  SAF + + A   +   G   IV + S    ++      Y+  KG +  L + +A 
Sbjct: 132 DTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAKGGIKMLTRAMAA 191
Query: 187 EWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP 246
           EWA+  I+ N++ P Y+ T   + L+ N +F   VK+RTP  R G+P+E+     FL   
Sbjct: 192 EWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQELVGTAVFLSAS 251
Query: 247 AASYITGQTVCIDGGF 262
           A+ Y+ GQ + +DGG 
Sbjct: 252 ASDYVNGQIIYVDGGM 267

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score =  130 bits (328), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 81/249 (32%), Positives = 129/249 (51%), Gaps = 2/249 (0%)
Query: 14  NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTG 73
            R  L    ALVT  T G+G A+   L+  GA V   SR +  +++ +  LQ +GL VTG
Sbjct: 9   RRDPLANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTG 68
Query: 74  SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTS-VLKPTLEYNAEDFSLVMSTNFES 132
           +VC V     R+ L+ T   L  G ++I V+N   +      ++   E +   +  N ++
Sbjct: 69  TVCHVGKAEDRERLVATAVKLHGG-IDILVSNAAVNPFFGSIMDVTEEVWDKTLDINVKA 127
Query: 133 AFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDN 192
              + +   P +   G  S+V++SS      +   + Y+ +K A+  L K LA E A  N
Sbjct: 128 PALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRN 187
Query: 193 IRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT 252
           IR N +AP  I+T F+  L  + +  + +K    + RLGEP++ + +V+FLC   ASYIT
Sbjct: 188 IRVNCLAPGLIKTSFSRMLWMDKEKEESMKETLRIRRLGEPEDCAGIVSFLCSEDASYIT 247
Query: 253 GQTVCIDGG 261
           G+TV + GG
Sbjct: 248 GETVVVGGG 256

>pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus Thermophilus Hb8 Length = 239

Iteration: 1
 Score =  130 bits (326), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 122/242 (50%), Gaps = 12/242 (4%)
Query: 23  ALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRP 82
           ALVTGG++G+G A+ E L   G  V   SR   E  + +  + +          D+    
Sbjct: 5   ALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLGAVPLP--------TDLEKDD 56
Query: 83  QRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHP 142
            +  +   + +L  G L++ V+    +V KP LE + E++  V+  + + AF L Q A P
Sbjct: 57  PKGLVKRALEAL--GGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAP 114
Query: 143 LLRASGAASIVLMSSALGIVSANVGTV--YSATKGAMNQLAKNLACEWAKDNIRTNSVAP 200
            +  +G   ++ + S     +     +  Y+  K A+  L + LA EWA+  IR N + P
Sbjct: 115 HMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCP 174
Query: 201 WYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDG 260
            Y+ T FT PL  N +  + + +R PMGR   P+E++ + A LC   A Y+TGQ V +DG
Sbjct: 175 GYVETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVLCGDEAEYLTGQAVAVDG 234
Query: 261 GF 262
           GF
Sbjct: 235 GF 236

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score =  129 bits (323), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/260 (33%), Positives = 126/260 (48%), Gaps = 28/260 (10%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
            L G TALVTG  +GLG A  E L+  GA V       T L E +  L  KG    G   
Sbjct: 6   DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAF 65
Query: 77  DVSSRPQRQTLINTVSSLFNGK---LNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESA 133
           DV+     +  I    S  + +   ++I +NN G    KP +E   E++  V+ TN  SA
Sbjct: 66  DVTD----ELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSA 121
Query: 134 FHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTV-----------YSATKGAMNQLAK 182
           F        L+  S A  ++  +S   I+  N+G++           Y+A KG +  L  
Sbjct: 122 F--------LVSRSAAKRMIARNSGGKII--NIGSLTSQAARPTVAPYTAAKGGIKMLTC 171
Query: 183 NLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAF 242
           ++A EWA+ NI+TN++ P YI T     L+ + +F   VKS TP  R G P+E+     F
Sbjct: 172 SMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIF 231
Query: 243 LCMPAASYITGQTVCIDGGF 262
           L   A+ YI GQ + +DGG+
Sbjct: 232 LSSKASDYINGQIIYVDGGW 251

>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260

Iteration: 1
 Score =  128 bits (322), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 127/263 (48%), Gaps = 12/263 (4%)
Query: 9   SHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG 68
           SH    +  L    A+VTGG + +GLA V  L+  GA V      E    + +  L+M+G
Sbjct: 2   SHMYMEKLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEG 61
Query: 69  LKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFS----- 123
             V+  V DV++    Q  + +V     G+++I V   G  +     E  AED +     
Sbjct: 62  HDVSSVVMDVTNTESVQNAVRSVHEQ-EGRVDILVACAGICIS----EVKAEDMTDGQWL 116
Query: 124 LVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIV--SANVGTVYSATKGAMNQLA 181
             +  N    F  CQ    ++       IV + S  G++         Y+A+K  ++Q  
Sbjct: 117 KQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYI 176
Query: 182 KNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVA 241
           ++LA EWA   IR N+VAP YI T  T   +   +  D   + TPMGR+G+P EV+S+V 
Sbjct: 177 RSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQ 236
Query: 242 FLCMPAASYITGQTVCIDGGFTV 264
           FL   AAS +TG  V +D GFTV
Sbjct: 237 FLASDAASLMTGAIVNVDAGFTV 259

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score =  128 bits (322), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 83/252 (32%), Positives = 135/252 (53%), Gaps = 6/252 (2%)
Query: 13  QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVT 72
           + R  L+   ALVT  T G+GLA+   L+  GA V   SR +  ++  +  LQ +GL VT
Sbjct: 7   ERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVT 66
Query: 73  GSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTS-VLKPTLEYNAEDFSLVMSTNFE 131
           G+VC V     R+ L+    +L  G ++I V+N   +      ++   E +  ++  N +
Sbjct: 67  GTVCHVGKAEDRERLVAMAVNLHGG-VDILVSNAAVNPFFGNIIDATEEVWDKILHVNVK 125
Query: 132 SAFHLCQLAHPLLRASGAASIVLMSSALGIVSA--NVGTVYSATKGAMNQLAKNLACEWA 189
           +   + +   P +   G  S++++SS +G      N+G  Y+ +K A+  L KNLA E A
Sbjct: 126 ATVLMTKAVVPEMEKRGGGSVLIVSS-VGAYHPFPNLGP-YNVSKTALLGLTKNLAVELA 183
Query: 190 KDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAAS 249
             NIR N +AP  I+T F++ L  +    + +K    + RLG P++ + +V+FLC   AS
Sbjct: 184 PRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSEDAS 243
Query: 250 YITGQTVCIDGG 261
           YITG+TV + GG
Sbjct: 244 YITGETVVVGGG 255

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score =  126 bits (317), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/255 (34%), Positives = 126/255 (49%), Gaps = 17/255 (6%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQM-----KGLKVT 72
           LQG  A+VTGG  G+G A+V+EL  LG+ V   SR    L      LQ      K  +V 
Sbjct: 16  LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVI 75
Query: 73  GSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFES 132
              C++ +  +   L+ +    F GK+N  VNN G   L P    +++ +  V+ TN   
Sbjct: 76  PIQCNIRNEEEVNNLVKSTLDTF-GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTG 134
Query: 133 AFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG---TVYS-ATKGAMNQLAKNLACEW 188
            F++C+  +         SIV +     IV    G    V+S A +  +  L K+LA EW
Sbjct: 135 TFYMCKAVYSSWMKEHGGSIVNI-----IVPTKAGFPLAVHSGAARAGVYNLTKSLALEW 189
Query: 189 AKDNIRTNSVAPWYIRTPFTEPLLGNG--KFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP 246
           A   IR N VAP  I +       G+    F +    + P  R+G P+EVSS+V FL  P
Sbjct: 190 ACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSP 249
Query: 247 AASYITGQTVCIDGG 261
           AAS+ITGQ+V +DGG
Sbjct: 250 AASFITGQSVDVDGG 264

>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271

Iteration: 1
 Score =  125 bits (315), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/257 (34%), Positives = 131/257 (50%), Gaps = 14/257 (5%)
Query: 12  RQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECI-HHLQMKGLK 70
           + N     G   L+TG +KG+G  + + L+ +G  V    R+  E+ + + + L+ KG K
Sbjct: 21  QSNAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYK 80
Query: 71  VTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNF 130
                 D +S       I T+    +G L+  VNN G    K  ++   EDF  V+  N 
Sbjct: 81  AAVIKFDAASESDFIEAIQTIVQS-DGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNL 139
Query: 131 ESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWA 189
            SAF  C+ A  ++  S   S+V ++S +G    N+G T YSA+KG M  ++K+ A E A
Sbjct: 140 TSAFIGCREALKVMSKSRFGSVVNVASIIG-ERGNMGQTNYSASKGGMIAMSKSFAYEGA 198
Query: 190 KDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKS----RTPMGRLGEPKEVSSLVAFLCM 245
             NIR NSV P +I T        N    DE+K+      P+ RLG  KEV+  VAFL  
Sbjct: 199 LRNIRFNSVTPGFIETDM------NANLKDELKADYVKNIPLNRLGSAKEVAEAVAFLLS 252
Query: 246 PAASYITGQTVCIDGGF 262
             +SYITG+T+ ++GG 
Sbjct: 253 DHSSYITGETLKVNGGL 269

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score =  123 bits (309), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 82/249 (32%), Positives = 118/249 (47%), Gaps = 7/249 (2%)
Query: 16  WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHL-QMKGLKVTGS 74
           + LQG + +VTGGTKG+G  +    +  GA V    R+  +++ C+  L Q+   KV G 
Sbjct: 6   FDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGV 65
Query: 75  VCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAF 134
             DVS R Q   L       F G +++   N G     P      E  + + + N    F
Sbjct: 66  QTDVSDRAQCDALAGRAVEEFGG-IDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTF 124
Query: 135 HLCQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAKDNI 193
           +  Q     L ASG+  +VL SS  G ++   G + Y ATK A     +  A E A   I
Sbjct: 125 YAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELAPHKI 184
Query: 194 RTNSVAPWYIRTPFTEPLLGNGK-FVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT 252
             N++ P  I    TE LL NG+ ++  +    P G LG P+++  L AFL    A YIT
Sbjct: 185 TVNAIMPGNI---MTEGLLENGEEYIASMARSIPAGALGTPEDIGHLAAFLATKEAGYIT 241
Query: 253 GQTVCIDGG 261
           GQ + +DGG
Sbjct: 242 GQAIAVDGG 250

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score =  123 bits (308), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 127/264 (48%), Gaps = 11/264 (4%)
Query: 9   SHSRQ----NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHL 64
           SH  Q    +++SL+G  ALVTG + G+G A+    +  GAT+      +  ++  +   
Sbjct: 19  SHMNQQFSLDQFSLKGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAY 78
Query: 65  QMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSL 124
           +  G+   G VCDV+     Q ++  + S   G ++I VNN G     P +E  A  F  
Sbjct: 79  KAAGINAHGYVCDVTDEDGIQAMVAQIESEV-GIIDILVNNAGIIRRVPMIEMTAAQFRQ 137
Query: 125 VMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNL 184
           V+  +  + F + +   P +   G   I+ + S +  +     + Y+A KG +  L KN+
Sbjct: 138 VIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNI 197
Query: 185 ACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGK------FVDEVKSRTPMGRLGEPKEVSS 238
           A E+ + NI+ N + P YI TP T PL    K      F   + ++TP  R GE +++  
Sbjct: 198 ASEYGEANIQCNGIGPGYIATPQTAPLRELQKDGSRHPFDQFIIAKTPAARWGEAEDLMG 257
Query: 239 LVAFLCMPAASYITGQTVCIDGGF 262
              FL   A++++ G  + +DGG 
Sbjct: 258 PAVFLASDASNFVNGHILYVDGGI 281

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score =  122 bits (306), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 135/253 (53%), Gaps = 14/253 (5%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGAT-VHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           L+G TA+VTG ++GLG A+  +L  +GA  V   S   T L+      +  G+ V  +  
Sbjct: 3   LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKG 62
Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           DV +    + ++ T    F G+++I VNN G +     L+ + +D+  V++TN +SA+  
Sbjct: 63  DVKNPEDVENMVKTAMDAF-GRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLC 121
Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEWAKDNIRT 195
            +    ++    +  I+ ++S  GI+  N G   Y+A+K  +    K++A E+A   I  
Sbjct: 122 TKAVSKIMLKQKSGKIINITSIAGII-GNAGQANYAASKAGLIGFTKSIAKEFAAKGIYC 180
Query: 196 NSVAPWYIRTPFTEPLLGNGKFVDEVK----SRTPMGRLGEPKEVSSLVAFLCMPAASYI 251
           N+VAP  I+T  T+ L       D+VK    +  P+ R G P+EV+++V FL    ++YI
Sbjct: 181 NAVAPGIIKTDMTDVL------PDKVKEMYLNNIPLKRFGTPEEVANVVGFLASDDSNYI 234
Query: 252 TGQTVCIDGGFTV 264
           TGQ + IDGG  +
Sbjct: 235 TGQVINIDGGLVM 247

>pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter Sphaeroides In Complex With Nad+ And 1,2-Pentandiol Length = 254

Iteration: 1
 Score =  120 bits (301), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 118/250 (47%), Gaps = 8/250 (3%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGS-VC 76
           L G  A VTG   G+GL +    +  GA +    R    L+     L   G  V    V 
Sbjct: 9   LDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL---GAAVAARIVA 65
Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           DV+             +     ++I VN+ G + L   LE +   +  VM+ N +  F  
Sbjct: 66  DVTD--AEAMTAAAAEAEAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWA 123
Query: 137 CQLAHPLLRASGAASIVLMSSALGIV--SANVGTVYSATKGAMNQLAKNLACEWAKDNIR 194
            +     + A GA +IV + S  G +       + Y A+KGA++QL + LA EWA   +R
Sbjct: 124 SRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGVR 183
Query: 195 TNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ 254
            N++AP Y+ T  T  +    +  +     TPMGR GEP E+++   FL  PAASY+TG 
Sbjct: 184 VNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALFLASPAASYVTGA 243
Query: 255 TVCIDGGFTV 264
            + +DGG+TV
Sbjct: 244 ILAVDGGYTV 253

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score =  119 bits (297), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 136/259 (52%), Gaps = 8/259 (3%)
Query: 6   QTESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQ 65
           QT+     ++ +L    A+VTG ++G+G A+  EL+  GA V   + TE          +
Sbjct: 15  QTQGPGSMDK-TLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFK 73
Query: 66  MKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLV 125
             GL+  G+V +V+       L+ +    F G LN+ VNN G +  +  +    +++  V
Sbjct: 74  QAGLEGRGAVLNVNDATAVDALVESTLKEF-GALNVLVNNAGITQDQLAMRMKDDEWDAV 132
Query: 126 MSTNFESAFHLCQ-LAHPLLRASGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKN 183
           + TN ++ F L + +  P+++A G   IV ++S +G  + N G V Y+A K  +  + + 
Sbjct: 133 IDTNLKAVFRLSRAVLRPMMKARGG-RIVNITSVVG-SAGNPGQVNYAAAKAGVAGMTRA 190
Query: 184 LACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFL 243
           LA E     I  N VAP +I T  T+ L    +    +K++ P+GRLG P++++  VAFL
Sbjct: 191 LAREIGSRGITVNCVAPGFIDTDMTKGLPQEQQTA--LKTQIPLGRLGSPEDIAHAVAFL 248
Query: 244 CMPAASYITGQTVCIDGGF 262
             P A YITG T+ ++GG 
Sbjct: 249 ASPQAGYITGTTLHVNGGM 267

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score =  118 bits (295), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 127/265 (47%), Gaps = 7/265 (2%)
Query: 2   AQPQQTESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECI 61
           AQ Q   S S  + + L G  AL+TG + G+G  V    +  GA V   +R    L    
Sbjct: 14  AQTQGPGSMSVLDLFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVA 73
Query: 62  HHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAED 121
             +   G K     CDV+   Q + +++ ++    G ++I V N G   ++  L+   E+
Sbjct: 74  DEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGG-IDIAVCNAGIVSVQAMLDMPLEE 132
Query: 122 FSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG---TVYSATKGAMN 178
           F  +  TN    F   Q A   +   G    ++ ++++     N+    + Y  +K A+ 
Sbjct: 133 FQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVV 192
Query: 179 QLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSS 238
            L K +A E A   IR NSV+P YIRT   EPL     +    + + P+GR+G P+E++ 
Sbjct: 193 HLTKAMAVELAPHQIRVNSVSPGYIRTELVEPL---ADYHALWEPKIPLGRMGRPEELTG 249
Query: 239 LVAFLCMPAASYITGQTVCIDGGFT 263
           L  +L   A+SY+TG  + IDGG+T
Sbjct: 250 LYLYLASAASSYMTGSDIVIDGGYT 274

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score =  117 bits (294), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 82/247 (33%), Positives = 127/247 (51%), Gaps = 6/247 (2%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK-GLKVTGSVC 76
           LQG  +LVTG T+G+G A+ E+L+  G+TV     +          +  K G+K  G   
Sbjct: 5   LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEM 64
Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           ++ S          + +L +G ++I VNN G +  K  L  +  D+  V+  N    F +
Sbjct: 65  NLLSEESINKAFEEIYNLVDG-IDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLV 123
Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEWAKDNIRT 195
            Q +   +       IV +SS +G  + NVG V YS TK  +    K+LA E A  N+  
Sbjct: 124 TQNSLRKMIKQRWGRIVNISSVVGF-TGNVGQVNYSTTKAGLIGFTKSLAKELAPRNVLV 182
Query: 196 NSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT 255
           N+VAP +I T  T  L  + +   + K + P+GR G P+EV+++V FLC   ASYITG+ 
Sbjct: 183 NAVAPGFIETDMTAVL--SEEIKQKYKEQIPLGRFGSPEEVANVVLFLCSELASYITGEV 240
Query: 256 VCIDGGF 262
           + ++GG 
Sbjct: 241 IHVNGGM 247

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score =  116 bits (291), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 129/247 (52%), Gaps = 8/247 (3%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           +L+G  ALVTG ++G+G A+ E L+  GA V   + +E+       +L   G    G   
Sbjct: 9   NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNG---KGMAL 65
Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           +V++    + ++  ++  F G ++I VNN G +     +    E++S +M TN  S F L
Sbjct: 66  NVTNPESIEAVLKAITDEFGG-VDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRL 124
Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEWAKDNIRT 195
            +     +       I+ + S +G +  N G   Y+A K  +    K++A E A   +  
Sbjct: 125 SKAVLRGMMKKRQGRIINVGSVVGTM-GNAGQANYAAAKAGVIGFTKSMAREVASRGVTV 183
Query: 196 NSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT 255
           N+VAP +I T  T+ L  N +      ++ P GRLG+P+E++S VAFL  P A+YITG+T
Sbjct: 184 NTVAPGFIETDMTKAL--NDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGET 241
Query: 256 VCIDGGF 262
           + ++GG 
Sbjct: 242 LHVNGGM 248

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  115 bits (287), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 129/247 (52%), Gaps = 8/247 (3%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           +L+G  ALVTG ++G+G A+ E L+  GA V   + +E+       +L   G    G   
Sbjct: 9   NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNG---KGMAL 65
Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           +V++    + ++  ++  F G ++I VNN G +     +    E++S +M TN  S F L
Sbjct: 66  NVTNPESIEAVLKAITDEFGG-VDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRL 124
Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEWAKDNIRT 195
            +     +       I+ + S +G +  N G   ++A K  +    K++A E A   +  
Sbjct: 125 SKAVLRGMMKKRQGRIINVGSVVGTM-GNAGQANFAAAKAGVIGFTKSMAREVASRGVTV 183
Query: 196 NSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT 255
           N+VAP +I T  T+ L  N +      ++ P GRLG+P+E++S VAFL  P A+YITG+T
Sbjct: 184 NTVAPGFIETDMTKAL--NDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGET 241
Query: 256 VCIDGGF 262
           + ++GG 
Sbjct: 242 LHVNGGM 248

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  114 bits (286), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 8/247 (3%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           +L+G  ALVTG ++G+G A+ E L+  GA V   + +E+       +L   G    G   
Sbjct: 9   NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNG---KGMAL 65
Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           +V++    + ++  ++  F G ++I VNN G +     +    E++S +M TN  S F L
Sbjct: 66  NVTNPESIEAVLKAITDEFGG-VDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRL 124
Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEWAKDNIRT 195
            +     +       I+ + S +G +  N G   Y+A K  +    K++A E A   +  
Sbjct: 125 SKAVLRGMMKKRQGRIINVGSVVGTM-GNAGQANYAAAKAGVIGFTKSMAREVASRGVTV 183
Query: 196 NSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT 255
           N+VAP  I T  T+ L  N +      ++ P GRLG+P+E++S VAFL  P A+YITG+T
Sbjct: 184 NTVAPGAIETDMTKAL--NDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGET 241
Query: 256 VCIDGGF 262
           + ++GG 
Sbjct: 242 LHVNGGM 248

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  114 bits (285), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 128/247 (51%), Gaps = 8/247 (3%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           +L+G  ALVTG ++G+G A+ E L+  GA V   + +E+       +L   G    G   
Sbjct: 9   NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNG---KGMAL 65
Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           +V++    + ++  ++  F G ++I VNN   +     +    E++S +M TN  S F L
Sbjct: 66  NVTNPESIEAVLKAITDEFGG-VDILVNNAAITRDNLLMRMKEEEWSDIMETNLTSIFRL 124
Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEWAKDNIRT 195
            +     +       I+ + S +G +  N G   Y+A K  +    K++A E A   +  
Sbjct: 125 SKAVLRGMMKKRQGRIINVGSVVGTM-GNAGQANYAAAKAGVIGFTKSMAREVASRGVTV 183
Query: 196 NSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT 255
           N+VAP +I T  T+ L  N +      ++ P GRLG+P+E++S VAFL  P A+YITG+T
Sbjct: 184 NTVAPGFIETDMTKAL--NDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGET 241
Query: 256 VCIDGGF 262
           + ++GG 
Sbjct: 242 LHVNGGM 248

>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8, Hsd17b8 Length = 264

Iteration: 1
 Score =  114 bits (284), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 89/267 (33%), Positives = 133/267 (49%), Gaps = 15/267 (5%)
Query: 13  QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKV- 71
           QNR  L+   ALVTG   G+G AV   L+  GATV  C        E +  L   G K  
Sbjct: 2   QNR--LRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEG 59
Query: 72  ------TGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLV 125
                      DVS     + L+  V + F+   ++ V+  G +  +  L  + +D+  V
Sbjct: 60  PPRGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKV 119
Query: 126 MSTNFESAFHLCQLAHPLLRASGA-ASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKN 183
           ++ N +  F + Q A   L ++G   SI+ +SS +G V  NVG T Y+A+K  +  L + 
Sbjct: 120 IAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKV-GNVGQTNYAASKAGVIGLTQT 178
Query: 184 LACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFL 243
            A E  +  IR NSV P +I TP T+ +    K VD++    PMG LG+P++V+ +VAFL
Sbjct: 179 AARELGRHGIRCNSVLPGFIATPMTQKV--PQKVVDKITEMIPMGHLGDPEDVADVVAFL 236
Query: 244 CMPAASYITGQTVCIDGG-FTVNGFFF 269
               + YITG +V + GG F     +F
Sbjct: 237 ASEDSGYITGTSVEVTGGLFMAENLYF 263

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  114 bits (284), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 128/247 (51%), Gaps = 8/247 (3%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           +L+G  ALVTG ++G+G A+ E L+  GA V   + +E+       +L   G    G   
Sbjct: 9   NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNG---KGMAL 65
Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           +V++    + ++  ++  F G ++I VNN   +     +    E++S +M TN  S F L
Sbjct: 66  NVTNPESIEAVLKAITDEFGG-VDILVNNADITRDNLLMRMKEEEWSDIMETNLTSIFRL 124
Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEWAKDNIRT 195
            +     +       I+ + S +G +  N G   Y+A K  +    K++A E A   +  
Sbjct: 125 SKAVLRGMMKKRQGRIINVGSVVGTM-GNAGQANYAAAKAGVIGFTKSMAREVASRGVTV 183
Query: 196 NSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT 255
           N+VAP +I T  T+ L  N +      ++ P GRLG+P+E++S VAFL  P A+YITG+T
Sbjct: 184 NTVAPGFIETDMTKAL--NDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGET 241
Query: 256 VCIDGGF 262
           + ++GG 
Sbjct: 242 LHVNGGM 248

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score =  113 bits (282), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 121/252 (48%), Gaps = 7/252 (2%)
Query: 16  WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSV 75
           +SL G  ALVTGG++G+G  + + L   GA V  C+R      +    L   G       
Sbjct: 25  FSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIP 83
Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
            D+SS    + L   +  L + +L+I VNN GTS       Y    +  VM  N  S F 
Sbjct: 84  ADLSSEAGARRLAQALGEL-SARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFS 142
Query: 136 LCQLAHPLLRASGAAS----IVLMSSALGIVS-ANVGTVYSATKGAMNQLAKNLACEWAK 190
             Q   PLLR S +A     ++ + S  GI +       Y  +K A++QL++ LA E   
Sbjct: 143 CIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKELVG 202
Query: 191 DNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY 250
           ++I  N +AP    +  T  +  + + ++   +  PMGR G P+E+++L   L   A +Y
Sbjct: 203 EHINVNVIAPGRFPSRMTRHIANDPQALEADSASIPMGRWGRPEEMAALAISLAGTAGAY 262
Query: 251 ITGQTVCIDGGF 262
           +TG  + IDGGF
Sbjct: 263 MTGNVIPIDGGF 274

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score =  112 bits (280), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 116/251 (46%), Gaps = 12/251 (4%)
Query: 23  ALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRP 82
           ALVTG T G+GL +   L   G  V  C+R E  L   +  L+  G++  G  CDV S P
Sbjct: 25  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 84
Query: 83  QRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQ--LA 140
           + + L+  V   + G +++ VNN G      T E   E +  V+ TN    F + +  L 
Sbjct: 85  EIEALVAAVVERY-GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLK 143
Query: 141 HPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAP 200
              +   G   IV ++S  G         YSA+K  +    K L  E A+  I  N+V P
Sbjct: 144 AGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCP 203
Query: 201 WYIRTPFTEPL---------LGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI 251
            ++ TP    +         +   +  D + +R P+GR  +P EV+ +VA+L  P A+ +
Sbjct: 204 GFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAAAV 263
Query: 252 TGQTVCIDGGF 262
           T Q + + GG 
Sbjct: 264 TAQALNVCGGL 274

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score =  112 bits (280), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 116/251 (46%), Gaps = 12/251 (4%)
Query: 23  ALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRP 82
           ALVTG T G+GL +   L   G  V  C+R E  L   +  L+  G++  G  CDV S P
Sbjct: 9   ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 68
Query: 83  QRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQ--LA 140
           + + L+  V   + G +++ VNN G      T E   E +  V+ TN    F + +  L 
Sbjct: 69  EIEALVAAVVERY-GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLK 127
Query: 141 HPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAP 200
              +   G   IV ++S  G         YSA+K  +    K L  E A+  I  N+V P
Sbjct: 128 AGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCP 187
Query: 201 WYIRTPFTEPL---------LGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI 251
            ++ TP    +         +   +  D + +R P+GR  +P EV+ +VA+L  P A+ +
Sbjct: 188 GFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAAAV 247
Query: 252 TGQTVCIDGGF 262
           T Q + + GG 
Sbjct: 248 TAQALNVCGGL 258

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score =  112 bits (280), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 116/251 (46%), Gaps = 12/251 (4%)
Query: 23  ALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRP 82
           ALVTG T G+GL +   L   G  V  C+R E  L   +  L+  G++  G  CDV S P
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 88
Query: 83  QRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQ--LA 140
           + + L+  V   + G +++ VNN G      T E   E +  V+ TN    F + +  L 
Sbjct: 89  EIEALVAAVVERY-GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLK 147
Query: 141 HPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAP 200
              +   G   IV ++S  G         YSA+K  +    K L  E A+  I  N+V P
Sbjct: 148 AGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCP 207
Query: 201 WYIRTPFTEPL---------LGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI 251
            ++ TP    +         +   +  D + +R P+GR  +P EV+ +VA+L  P A+ +
Sbjct: 208 GFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAAAV 267
Query: 252 TGQTVCIDGGF 262
           T Q + + GG 
Sbjct: 268 TAQALNVCGGL 278

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score =  112 bits (279), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 116/251 (46%), Gaps = 12/251 (4%)
Query: 23  ALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRP 82
           ALVTG T G+GL +   L   G  V  C+R E  L   +  L+  G++  G  CDV S P
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 88
Query: 83  QRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQ--LA 140
           + + L+  V   + G +++ VNN G      T E   E +  V+ TN    F + +  L 
Sbjct: 89  EIEALVAAVVERY-GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLK 147
Query: 141 HPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAP 200
              +   G   IV ++S  G         YSA+K  +    K L  E A+  I  N+V P
Sbjct: 148 AGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCP 207
Query: 201 WYIRTPFTEPL---------LGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI 251
            ++ TP    +         +   +  D + +R P+GR  +P EV+ +VA+L  P A+ +
Sbjct: 208 GFVETPMAASVREHFSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAAAV 267
Query: 252 TGQTVCIDGGF 262
           T Q + + GG 
Sbjct: 268 TAQALNVCGGL 278

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score =  112 bits (279), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 116/251 (46%), Gaps = 12/251 (4%)
Query: 23  ALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRP 82
           ALVTG T G+GL +   L   G  V  C+R E  L   +  L+  G++  G  CDV S P
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 88
Query: 83  QRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQ--LA 140
           + + L+  V   + G +++ VNN G      T E   E +  V+ TN    F + +  L 
Sbjct: 89  EIEALVAAVVERY-GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLK 147
Query: 141 HPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAP 200
              +   G   IV ++S  G         YSA+K  +    K L  E A+  I  N+V P
Sbjct: 148 AGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCP 207
Query: 201 WYIRTPFTEPL---------LGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI 251
            ++ TP    +         +   +  D + +R P+GR  +P EV+ +VA+L  P A+ +
Sbjct: 208 GWVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAAAV 267
Query: 252 TGQTVCIDGGF 262
           T Q + + GG 
Sbjct: 268 TAQALNVCGGL 278

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score =  111 bits (278), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 116/251 (46%), Gaps = 12/251 (4%)
Query: 23  ALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRP 82
           ALVTG T G+GL +   L   G  V  C+R E  L   +  L+  G++  G  CDV S P
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 88
Query: 83  QRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQ--LA 140
           + + L+  V   + G +++ VNN G      T E   E +  V+ TN    F + +  L 
Sbjct: 89  EIEALVAAVVERY-GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLK 147
Query: 141 HPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAP 200
              +   G   IV ++S  G         YSA+K  +    K L  E A+  I  N+V P
Sbjct: 148 AGGMLERGTGRIVNIASTGGKQGLVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCP 207
Query: 201 WYIRTPFTEPL---------LGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI 251
            ++ TP    +         +   +  D + +R P+GR  +P EV+ +VA+L  P A+ +
Sbjct: 208 GFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAAAV 267
Query: 252 TGQTVCIDGGF 262
           T Q + + GG 
Sbjct: 268 TAQALNVCGGL 278

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score =  111 bits (278), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 116/251 (46%), Gaps = 12/251 (4%)
Query: 23  ALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRP 82
           ALVTG T G+GL +   L   G  V  C+R E  L   +  L+  G++  G  CDV S P
Sbjct: 25  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 84
Query: 83  QRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQ--LA 140
           + + L+  V   + G +++ VNN G      T E   E +  V+ TN    F + +  L 
Sbjct: 85  EIEALVAAVVERY-GPVDVLVNNAGRLGGGATAELADELWLDVVETNLTGVFRVTKQVLK 143
Query: 141 HPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAP 200
              +   G   IV ++S  G         YSA+K  +    K L  E A+  I  N+V P
Sbjct: 144 AGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCP 203
Query: 201 WYIRTPFTEPL---------LGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI 251
            ++ TP    +         +   +  D + +R P+GR  +P EV+ +VA+L  P A+ +
Sbjct: 204 GFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAAAV 263
Query: 252 TGQTVCIDGGF 262
           T Q + + GG 
Sbjct: 264 TAQALNVCGGL 274

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score =  111 bits (277), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 116/251 (46%), Gaps = 12/251 (4%)
Query: 23  ALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRP 82
           ALVTG T G+GL +   L   G  V  C+R E  L   +  L+  G++  G  CDV S P
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 88
Query: 83  QRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQ--LA 140
           + + L+  V   + G +++ VNN G      T E   E +  V+ TN    F + +  L 
Sbjct: 89  EIEALVAAVVERY-GPVDVLVNNAGRLGGGATAELADELWLDVVETNLTGVFRVTKQVLK 147
Query: 141 HPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAP 200
              +   G   IV ++S  G         YSA+K  +    K L  E A+  I  N+V P
Sbjct: 148 AGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCP 207
Query: 201 WYIRTPFTEPL---------LGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI 251
            ++ TP    +         +   +  D + +R P+GR  +P EV+ +VA+L  P A+ +
Sbjct: 208 GFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAAAV 267
Query: 252 TGQTVCIDGGF 262
           T Q + + GG 
Sbjct: 268 TAQALNVCGGL 278

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score =  110 bits (275), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 76/246 (30%), Positives = 124/246 (50%), Gaps = 8/246 (3%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           +L+G  ALVTG ++G+G A+ E L+  GA V   + +E+       +L   G    G   
Sbjct: 6   NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNG---KGXAL 62
Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           +V++    + ++  ++  F G ++I VNN G +          E++S +  TN  S F L
Sbjct: 63  NVTNPESIEAVLKAITDEFGG-VDILVNNAGITRDNLLXRXKEEEWSDIXETNLTSIFRL 121
Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEWAKDNIRT 195
            +             I+ + S +G    N G   Y+A K  +    K+ A E A   +  
Sbjct: 122 SKAVLRGXXKKRQGRIINVGSVVG-TXGNAGQANYAAAKAGVIGFTKSXAREVASRGVTV 180
Query: 196 NSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT 255
           N+VAP +I T  T+ L  N +      ++ P GRLG+P+E++S VAFL  P A+YITG+T
Sbjct: 181 NTVAPGFIETDXTKAL--NDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGET 238
Query: 256 VCIDGG 261
           + ++GG
Sbjct: 239 LHVNGG 244

>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291

Iteration: 1
 Score =  109 bits (273), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 127/265 (47%), Gaps = 10/265 (3%)
Query: 6   QTESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCS-RTETELNECIHHL 64
           Q E  + +    L+G   L+TGG  G+G AV    +  GA +       E + NE   ++
Sbjct: 33  QFEDPNYKGSEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYV 92
Query: 65  QMKGLKVTGSVCDVSSRPQRQTLIN-TVSSLFNGKLNIFVNNVGTSVLKPTLEY-NAEDF 122
           + +G+K      D+S     + ++  TV  L  G LNI VNNV     +  LEY  AE  
Sbjct: 93  EKEGVKCVLLPGDLSDEQHCKDIVQETVRQL--GSLNILVNNVAQQYPQQGLEYITAEQL 150
Query: 123 SLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLA 181
                 N  S FH+ + A   L+      +++ ++++     N   + YSATKGA+    
Sbjct: 151 EKTFRINIFSYFHVTKAALSHLKQ---GDVIINTASIVAYEGNETLIDYSATKGAIVAFT 207
Query: 182 KNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVA 241
           ++L+    +  IR N VAP  I TP   P   + K V +  S  PM R G+P E++    
Sbjct: 208 RSLSQSLVQKGIRVNGVAPGPIWTPLI-PSSFDEKKVSQFGSNVPMQRPGQPYELAPAYV 266
Query: 242 FLCMPAASYITGQTVCIDGGFTVNG 266
           +L    +SY+TGQ + ++GG  VNG
Sbjct: 267 YLASSDSSYVTGQMIHVNGGVIVNG 291

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score =  109 bits (272), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 130/258 (50%), Gaps = 5/258 (1%)
Query: 7   TESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQM 66
           +E+      +  +   ALVTG  +G+G  + + L+   + V   SRT+   +  +  ++ 
Sbjct: 31  SENKKENYYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKS 90
Query: 67  KGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVM 126
            G + +G   DVS + +   +IN + +     ++I VNN G +     L    +++  V+
Sbjct: 91  FGYESSGYAGDVSKKEEISEVINKILTEHK-NVDILVNNAGITRDNLFLRMKNDEWEDVL 149
Query: 127 STNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLA 185
            TN  S F++ Q     +  +    I+ +SS +G+ + NVG   YS++K  +    K+LA
Sbjct: 150 RTNLNSLFYITQPISKRMINNRYGRIINISSIVGL-TGNVGQANYSSSKAGVIGFTKSLA 208
Query: 186 CEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCM 245
            E A  NI  N++AP +I +  T+ +  + +    + S  P GR+G P+EV++L  FL  
Sbjct: 209 KELASRNITVNAIAPGFISSDMTDKI--SEQIKKNIISNIPAGRMGTPEEVANLACFLSS 266
Query: 246 PAASYITGQTVCIDGGFT 263
             + YI G+   IDGG +
Sbjct: 267 DKSGYINGRVFVIDGGLS 284

>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273

Iteration: 1
 Score =  109 bits (272), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 118/246 (47%), Gaps = 3/246 (1%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           SL G TA+VTG   G+G A+    +  GA V    RT+  + E    +   G      V 
Sbjct: 28  SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDG-VKEVADEIADGGGSAEAVVA 86
Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           D++       +   +++    ++++ VNN G     P  E +   +  V++ N ++A+ L
Sbjct: 87  DLADLEGAANVAEELAATR--RVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVL 144
Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTN 196
            +     + A G+  IV ++S L          Y+A+K A+  L + LA EWA   +  N
Sbjct: 145 SRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVGVN 204
Query: 197 SVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTV 256
           ++AP Y+ T  T  L  + +   E+ +R P GR   P+++     FL   AASY+ GQ +
Sbjct: 205 ALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLASDAASYVHGQVL 264
Query: 257 CIDGGF 262
            +DGG+
Sbjct: 265 AVDGGW 270

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score =  108 bits (271), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 125/242 (51%), Gaps = 4/242 (1%)
Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECI-HHLQMKGLKVTGSVCDVSS 80
           +ALVTG ++G+G ++  +L+  G  V        E  E +   ++ KG+       +V+ 
Sbjct: 12  SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVAD 71
Query: 81  RPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLA 140
             + + +I  V S F G L++ VNN G +     +    +++  V+ TN +  F+  Q A
Sbjct: 72  ADEVKAMIKEVVSQF-GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKA 130
Query: 141 HPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAP 200
            P +    + +I+ +SS +G V       Y ATK  +  L K+ A E A   I  N+VAP
Sbjct: 131 TPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAP 190
Query: 201 WYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDG 260
            +I +  T+ L  + +  +++ ++ P+ R G+  ++++ VAFL    A YITGQT+ ++G
Sbjct: 191 GFIVSDMTDAL--SDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVNG 248
Query: 261 GF 262
           G 
Sbjct: 249 GM 250

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score =  108 bits (270), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 127/250 (50%), Gaps = 7/250 (2%)
Query: 14  NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTG 73
           +   L G  A++TG   G+G  +    +  GA+V          N  +  +Q  G +   
Sbjct: 5   DNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFA 64
Query: 74  SVCDVSSRPQRQTLIN-TVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFES 132
             CD++S  +   L +  +S L  GK++I VNN G    KP  +    DF      N  S
Sbjct: 65  CRCDITSEQELSALADFAISKL--GKVDILVNNAGGGGPKP-FDMPMADFRRAYELNVFS 121
Query: 133 AFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAKD 191
            FHL QL  P +  +G   I+ ++S +   + N+  T Y+++K A + L +N+A +  + 
Sbjct: 122 FFHLSQLVAPEMEKNGGGVILTITS-MAAENKNINMTSYASSKAAASHLVRNMAFDLGEK 180
Query: 192 NIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI 251
           NIR N +AP  I T   + ++   +   ++   TP+ RLG+P+++++   FLC PAAS++
Sbjct: 181 NIRVNGIAPGAILTDALKSVI-TPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWV 239
Query: 252 TGQTVCIDGG 261
           +GQ + + GG
Sbjct: 240 SGQILTVSGG 249

>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256

Iteration: 1
 Score =  108 bits (270), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 124/253 (49%), Gaps = 3/253 (1%)
Query: 9   SHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG 68
           S S ++ + L    A+VTG   G+G A+    +  GA+V                ++  G
Sbjct: 1   SMSYESPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAG 60
Query: 69  LKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMST 128
            K  G  C+V+    R+ +I      F GK+ + VNN G    KP  +    DF      
Sbjct: 61  GKAIGLECNVTDEQHREAVIKAALDQF-GKITVLVNNAGGGGPKP-FDMPMSDFEWAFKL 118
Query: 129 NFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEW 188
           N  S F L QLA P ++ +G  +I+ +SS  G  +      Y ++K A+N L +N+A + 
Sbjct: 119 NLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDV 178
Query: 189 AKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAA 248
               IR N++AP  I+T     +L   +    +   TP+GRLGE +++++   FLC PAA
Sbjct: 179 GPMGIRVNAIAPGAIKTDALATVL-TPEIERAMLKHTPLGRLGEAQDIANAALFLCSPAA 237
Query: 249 SYITGQTVCIDGG 261
           ++I+GQ + + GG
Sbjct: 238 AWISGQVLTVSGG 250

>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261

Iteration: 1
 Score =  108 bits (270), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 123/250 (49%), Gaps = 3/250 (1%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRT-ETELNECIHHLQMKGLKVTGSV 75
            L+G   ++TG + GLG ++    +   A V    R+ E E N  +  ++  G +     
Sbjct: 4   DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVK 63
Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
            DV+       L+ +    F GKL++ +NN G      + E +  D++ V+ TN   AF 
Sbjct: 64  GDVTVESDVINLVQSAIKEF-GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFL 122
Query: 136 LCQLA-HPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIR 194
             + A    +      +++ MSS    +   +   Y+A+KG M  + K LA E+A   IR
Sbjct: 123 GSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTKTLALEYAPKGIR 182
Query: 195 TNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ 254
            N++ P  I TP       + +   +V+S  PMG +GEP+E++++ A+L    ASY+TG 
Sbjct: 183 VNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTGI 242
Query: 255 TVCIDGGFTV 264
           T+  DGG T+
Sbjct: 243 TLFADGGMTL 252

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score =  108 bits (269), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 120/249 (48%), Gaps = 11/249 (4%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           SL    ALVTG ++G+G  V   L+  GATV   + ++    +  +  + KG K  G V 
Sbjct: 2   SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSXKEKGFKARGLVL 61
Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           ++S     Q     + +  N  ++I VNN G +        + +++  V++TN  S F  
Sbjct: 62  NISDIESIQNFFAEIKAE-NLAIDILVNNAGITRDNLXXRXSEDEWQSVINTNLSSIFRX 120
Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTN 196
            +             I+ + S +G       T Y A K  +   +K+LA E A  NI  N
Sbjct: 121 SKECVRGXXKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRNITVN 180
Query: 197 SVAPWYIRTPFTEPLLGNGKFVDEVKS----RTPMGRLGEPKEVSSLVAFLCMPAASYIT 252
            VAP +I T  T+      K  DE KS    + P G++GEPK++++ VAFL    A YIT
Sbjct: 181 VVAPGFIATDXTD------KLTDEQKSFIATKIPSGQIGEPKDIAAAVAFLASEEAKYIT 234
Query: 253 GQTVCIDGG 261
           GQT+ ++GG
Sbjct: 235 GQTLHVNGG 243

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score =  108 bits (269), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 121/256 (47%), Gaps = 12/256 (4%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK-GLKVTGSVC 76
           + G  A++TG + G+GLA+ E  +  GA +   +R    L+E    L+ K G++V     
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAV 64
Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           DV++      ++ +V S F G  +I VNN GT   +  +E   E +      +  +A  L
Sbjct: 65  DVATPEGVDAVVESVRSSFGGA-DILVNNAGTGSNETIMEAADEKWQFYWELHVMAAVRL 123
Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTN 196
            +   P +RA G  +I+  +S   +       +Y+ TK A+   +K LA E  KDNIR N
Sbjct: 124 ARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVN 183
Query: 197 SVAPWYIRTP--------FTEPLLGNGK-FVDEV-KSRTPMGRLGEPKEVSSLVAFLCMP 246
            + P  I TP         T+   G+ K ++  V     P+ R   P+E+++   FLC  
Sbjct: 184 CINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFLCSE 243
Query: 247 AASYITGQTVCIDGGF 262
            A+Y  G    +DGG 
Sbjct: 244 RATYSVGSAYFVDGGM 259

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score =  107 bits (268), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 125/251 (49%), Gaps = 10/251 (3%)
Query: 16  WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSV 75
           + L G  ALVTG T GLG A+   L   GA V      E +L E    L   G ++    
Sbjct: 3   FDLTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAEL---GERIFVFP 59
Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
            ++S R   + L         G ++I VNN G +     +  + ED+  V++ N  S F+
Sbjct: 60  ANLSDREAVKALGQKAEEEMGG-VDILVNNAGITRDGLFVRMSDEDWDAVLTVNLTSVFN 118
Query: 136 LC-QLAHPLLRASGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEWAKDNI 193
           L  +L HP++R      I+ ++S +G V+ N G   Y A+K  +   +K+LA E A  N+
Sbjct: 119 LTRELTHPMMRRRNG-RIINITSIVG-VTGNPGQANYCASKAGLIGFSKSLAQEIASRNV 176
Query: 194 RTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG 253
             N +AP +I +  T  L  N K  D +    PM R+G   ++++ V +L    A+Y+TG
Sbjct: 177 TVNCIAPGFIESAMTGKL--NEKQKDAIMGNIPMKRMGVGADIAAAVVYLASDEAAYVTG 234
Query: 254 QTVCIDGGFTV 264
           QT+ ++GG  +
Sbjct: 235 QTLHVNGGMAM 245

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score =  107 bits (267), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 125/251 (49%), Gaps = 10/251 (3%)
Query: 16  WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSV 75
           + L G  ALVTG T GLG A+   L   GA V      E +L E    L   G ++    
Sbjct: 6   FDLTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAEL---GERIFVFP 62
Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
            ++S R   + L         G ++I VNN G +     +  + ED+  V++ N  S F+
Sbjct: 63  ANLSDREAVKALGQKAEEEMGG-VDILVNNAGITRDGLFVRMSDEDWDAVLTVNLTSVFN 121
Query: 136 LC-QLAHPLLRASGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEWAKDNI 193
           L  +L HP++R      I+ ++S +G V+ N G   Y A+K  +   +K+LA E A  N+
Sbjct: 122 LTRELTHPMMRRRNG-RIINITSIVG-VTGNPGQANYCASKAGLIGFSKSLAQEIASRNV 179
Query: 194 RTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG 253
             N +AP +I +  T  L  N K  D +    PM R+G   ++++ V +L    A+Y+TG
Sbjct: 180 TVNCIAPGFIESAMTGKL--NEKQKDAIMGNIPMKRMGVGADIAAAVVYLASDEAAYVTG 237
Query: 254 QTVCIDGGFTV 264
           QT+ ++GG  +
Sbjct: 238 QTLHVNGGMAM 248

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score =  107 bits (267), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 130/255 (50%), Gaps = 18/255 (7%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L G  A++TGGT G+GLA+  +    GA V    R  +++ E       K  K  G+   
Sbjct: 4   LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITDR-HSDVGE-------KAAKSVGTPDQ 55
Query: 78  VSSRPQRQTLINTVSSLFN------GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFE 131
           +       +  +  + LF+      G ++  VNN G +V K   E    ++  +++ N +
Sbjct: 56  IQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLD 115
Query: 132 SAFHLCQLAHPLLRASG-AASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWA- 189
             F   +L    ++  G  ASI+ MSS  G V       Y+A+KGA+  ++K+ A + A 
Sbjct: 116 GVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCAL 175
Query: 190 KD-NIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAA 248
           KD ++R N+V P YI+TP  + L G  + + + +++TPMG +GEP +++ +  +L    +
Sbjct: 176 KDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQ-RTKTPMGHIGEPNDIAYICVYLASNES 234
Query: 249 SYITGQTVCIDGGFT 263
            + TG    +DGG+T
Sbjct: 235 KFATGSEFVVDGGYT 249

>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291

Iteration: 1
 Score =  107 bits (267), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 81/265 (30%), Positives = 126/265 (47%), Gaps = 10/265 (3%)
Query: 6   QTESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCS-RTETELNECIHHL 64
           Q E  + +    L+G   L+TGG  G+G AV    +  GA +       E + NE   ++
Sbjct: 33  QFEDPNYKGSEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYV 92
Query: 65  QMKGLKVTGSVCDVSSRPQRQTLIN-TVSSLFNGKLNIFVNNVGTSVLKPTLEY-NAEDF 122
           + +G+K      D+S     + ++  TV  L  G LNI VNNV     +  LEY  AE  
Sbjct: 93  EKEGVKCVLLPGDLSDEQHCKDIVQETVRQL--GSLNILVNNVAQQYPQQGLEYITAEQL 150
Query: 123 SLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLA 181
                 N  S FH+ + A   L+      +++ ++++     N   + YSATKGA+    
Sbjct: 151 EKTFRINIFSYFHVTKAALSHLKQ---GDVIINTASIVAYEGNETLIDYSATKGAIVAFT 207
Query: 182 KNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVA 241
           ++L+    +  IR N VAP  I TP   P   + K V +  S  P  R G+P E++    
Sbjct: 208 RSLSQSLVQKGIRVNGVAPGPIWTPLI-PSSFDEKKVSQFGSNVPXQRPGQPYELAPAYV 266
Query: 242 FLCMPAASYITGQTVCIDGGFTVNG 266
           +L    +SY+TGQ + ++GG  VNG
Sbjct: 267 YLASSDSSYVTGQXIHVNGGVIVNG 291

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score =  107 bits (267), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 130/255 (50%), Gaps = 18/255 (7%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L G  A++TGGT G+GLA+  +    GA V    R  +++ E       K  K  G+   
Sbjct: 4   LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGR-HSDVGE-------KAAKSVGTPDQ 55
Query: 78  VSSRPQRQTLINTVSSLFN------GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFE 131
           +       +  +  + LF+      G ++  VNN G +V K   E    ++  +++ N +
Sbjct: 56  IQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLD 115
Query: 132 SAFHLCQLAHPLLRASG-AASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWA- 189
             F   +L    ++  G  ASI+ MSS  G V       Y+A+KGA+  ++K+ A + A 
Sbjct: 116 GVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCAL 175
Query: 190 KD-NIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAA 248
           KD ++R N+V P YI+TP  + L G  + + + +++TPMG +GEP +++ +  +L    +
Sbjct: 176 KDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQ-RTKTPMGHIGEPNDIAYICVYLASNES 234
Query: 249 SYITGQTVCIDGGFT 263
            + TG    +DGG+T
Sbjct: 235 KFATGSEFVVDGGYT 249

>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261

Iteration: 1
 Score =  107 bits (266), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 123/249 (49%), Gaps = 3/249 (1%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRT-ETELNECIHHLQMKGLKVTGSV 75
            L+G   ++TG + GLG ++    +   A V    R+ E E N  +  ++  G +     
Sbjct: 4   DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVK 63
Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
            DV+       L+ +    F GKL++ +NN G +    + E +  D++ V+ TN   AF 
Sbjct: 64  GDVTVESDVINLVQSAIKEF-GKLDVMINNAGLANPVSSHEMSLSDWNKVIDTNLTGAFL 122
Query: 136 LCQLA-HPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIR 194
             + A    +      +++ MSS    +   +   Y+A+KG M  + + LA E+A   IR
Sbjct: 123 GSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIR 182
Query: 195 TNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ 254
            N++ P  I TP       + +   +V+S  PMG +GEP+E++++ A+L    ASY+TG 
Sbjct: 183 VNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTGI 242
Query: 255 TVCIDGGFT 263
           T+  DGG T
Sbjct: 243 TLFADGGMT 251

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score =  107 bits (266), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 124/246 (50%), Gaps = 6/246 (2%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           + +G  ALVTG ++G+G A+ E L+  GA V   + +E        +L   G    G + 
Sbjct: 2   NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANG---KGLML 58
Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           +V+     ++++  + + F G+++I VNN G +     +    E+++ ++ TN  S F L
Sbjct: 59  NVTDPASIESVLEKIRAEF-GEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRL 117
Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTN 196
            +     +       I+ + S +G +       Y+A K  +   +K+LA E A   I  N
Sbjct: 118 SKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVN 177
Query: 197 SVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTV 256
            VAP +I T  T  L  + +    + ++ P GRLG  +E+++ VAFL    A+YITG+T+
Sbjct: 178 VVAPGFIETDMTRALSDDQRA--GILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL 235
Query: 257 CIDGGF 262
            ++GG 
Sbjct: 236 HVNGGM 241

>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261

Iteration: 1
 Score =  106 bits (265), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 123/250 (49%), Gaps = 3/250 (1%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRT-ETELNECIHHLQMKGLKVTGSV 75
            L+G   ++TG + GLG ++    +   A V    R+ E E N  +  ++  G +     
Sbjct: 4   DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVK 63
Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
            DV+       L+ +    F GKL++ +NN G      + E +  D++ V+ TN   AF 
Sbjct: 64  GDVTVESDVINLVQSAIKEF-GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFL 122
Query: 136 LCQLA-HPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIR 194
             + A    +      +++ MSS    +   +   Y+A+KG M  + + LA E+A   IR
Sbjct: 123 GSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIR 182
Query: 195 TNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ 254
            N++ P  I TP       + +   +V+S  PMG +GEP+E++++ A+L    ASY+TG 
Sbjct: 183 VNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTGI 242
Query: 255 TVCIDGGFTV 264
           T+  DGG T+
Sbjct: 243 TLFADGGMTL 252

>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261

Iteration: 1
 Score =  106 bits (265), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 122/249 (48%), Gaps = 3/249 (1%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRT-ETELNECIHHLQMKGLKVTGSV 75
            L+G   ++TG + GLG ++    +   A V    R+ E E N  +  ++  G +     
Sbjct: 4   DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVK 63
Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
            DV+       L+ +    F GKL++ +NN G      + E +  D++ V+ TN   AF 
Sbjct: 64  GDVTVESDVINLVQSAIKEF-GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFL 122
Query: 136 LCQLA-HPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIR 194
             + A    +      +++ MSS    +   +   Y+A+KG M  + + LA E+A   IR
Sbjct: 123 GSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIR 182
Query: 195 TNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ 254
            N++ P  I TP       + +   +V+S  PMG +GEP+E++++ A+L    ASY+TG 
Sbjct: 183 VNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTGI 242
Query: 255 TVCIDGGFT 263
           T+  DGG T
Sbjct: 243 TLFADGGMT 251

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score =  106 bits (264), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 120/256 (46%), Gaps = 12/256 (4%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK-GLKVTGSVC 76
           + G  A++TG + G+GLA+ E  +  GA +   +R    L+E    L+ K G++V     
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAV 64
Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           DV++      ++ +V S F G  +I VNN GT   +  +E   E +         +A  L
Sbjct: 65  DVATPEGVDAVVESVRSSFGGA-DILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRL 123
Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTN 196
            +   P +RA G  +I+  +S   +       +Y+ TK A+   +K LA E  KDNIR N
Sbjct: 124 ARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVN 183
Query: 197 SVAPWYIRTP--------FTEPLLGNGK-FVDEV-KSRTPMGRLGEPKEVSSLVAFLCMP 246
            + P  I TP         T+   G+ K ++  V     P+ R   P+E+++   FLC  
Sbjct: 184 CINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFLCSE 243
Query: 247 AASYITGQTVCIDGGF 262
            A+Y  G    +DGG 
Sbjct: 244 RATYSVGSAYFVDGGM 259

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score =  105 bits (263), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 121/247 (48%), Gaps = 6/247 (2%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHT-CSRTETELNECIHHLQMKGLKVTGSVC 76
           L+G  ALVTG ++G+G A+  +L+  GA V    +  E + NE +  ++  G        
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRA 61
Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           DV++      ++     +F G+++I VNN G +     +    E++  V++TN +  F  
Sbjct: 62  DVANAEDVTNMVKQTVDVF-GQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLC 120
Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEWAKDNIRT 195
            +     +       IV ++S +G V+ N G   Y A K  +  L K  A E A  NI  
Sbjct: 121 TKAVSRFMMRQRHGRIVNIASVVG-VTGNPGQANYVAAKAGVIGLTKTSAKELASRNITV 179
Query: 196 NSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT 255
           N++AP +I T  T+ L  N K   E+    P  + GE +++++ V F     + YITGQT
Sbjct: 180 NAIAPGFIATDMTDVLDENIKA--EMLKLIPAAQFGEAQDIANAVTFFASDQSKYITGQT 237
Query: 256 VCIDGGF 262
           + +DGG 
Sbjct: 238 LNVDGGM 244

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score =  105 bits (263), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 118/252 (46%), Gaps = 12/252 (4%)
Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
           TA VTG + G+GLAV   L+  G  V+ C+R    ++  +  L+  G  V GS CDV+S 
Sbjct: 26  TAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTST 85
Query: 82  PQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQ--L 139
            +    +      F G + I VN+ G +    T + +   ++ V+ TN    F + +  L
Sbjct: 86  DEVHAAVAAAVERF-GPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVL 144
Query: 140 AHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVA 199
               +R +G   IV ++S  G         Y+A+K  +    K++  E AK  I  N+V 
Sbjct: 145 RAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVC 204
Query: 200 PWYIRTPFTEPLLGN-----GKFVDEVKSR----TPMGRLGEPKEVSSLVAFLCMPAASY 250
           P Y+ TP  E +        G    EV  R     P+GR   P+EV+ LV +L   AA+ 
Sbjct: 205 PGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLVGYLVTDAAAS 264
Query: 251 ITGQTVCIDGGF 262
           IT Q + + GG 
Sbjct: 265 ITAQALNVCGGL 276

>pdb|1H5Q|A Chain A, Mannitol Dehydrogenase From Agaricus Bisporus Length = 265

Iteration: 1
 Score =  105 bits (263), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 123/249 (49%), Gaps = 12/249 (4%)
Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK-GLKVTGSVCDVSS 80
           T +VTGG +G+GLA    ++  GA V    R+  +  E    +  + G+K     CDVS+
Sbjct: 16  TIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSN 75
Query: 81  RPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQ-L 139
                  I  + +   G ++  + N G SV+KP  E   EDF+ V   N    F+ C+ +
Sbjct: 76  TDIVTKTIQQIDADL-GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAV 134
Query: 140 AHPLLRASGAASIVL---MSSALGIVSANVGTV----YSATKGAMNQLAKNLACEWAKDN 192
           A   L+     SIV+   MSS +   S+  G++    Y+++K A + L K LA EWA   
Sbjct: 135 AKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAG 194
Query: 193 IRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT 252
           IR N+++P Y+ T  T  +  + K  D   S  P+ R  +P+E++     L    A+Y+T
Sbjct: 195 IRVNALSPGYVNTDQTAHM--DKKIRDHQASNIPLNRFAQPEEMTGQAILLLSDHATYMT 252
Query: 253 GQTVCIDGG 261
           G    IDGG
Sbjct: 253 GGEYFIDGG 261

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score =  105 bits (262), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 124/246 (50%), Gaps = 6/246 (2%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           + +G  ALVTG ++G+G A+ E L+  GA V   + +E        +L   G    G + 
Sbjct: 2   NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANG---KGLML 58
Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           +V+     ++++  + + F G+++I VNN G +     +    E+++ ++ TN  S F L
Sbjct: 59  NVTDPASIESVLEKIRAEF-GEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRL 117
Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTN 196
            +     +       I+ + S +G +       ++A K  +   +K+LA E A   I  N
Sbjct: 118 SKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANFAAAKAGLIGFSKSLAREVASRGITVN 177
Query: 197 SVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTV 256
            VAP +I T  T  L  + +    + ++ P GRLG  +E+++ VAFL    A+YITG+T+
Sbjct: 178 VVAPGFIETDMTRALSDDQRA--GILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL 235
Query: 257 CIDGGF 262
            ++GG 
Sbjct: 236 HVNGGM 241

>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate 3-Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506435) With Bound Nadp Length = 247

Iteration: 1
 Score =  105 bits (261), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 115/251 (45%), Gaps = 9/251 (3%)
Query: 13  QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVT 72
           +N +SL+G  ALVTG   GLG A+   L+  GA V   +R   +  E +  +   G   +
Sbjct: 2   KNPFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPD--ETLDIIAKDGGNAS 59
Query: 73  GSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFES 132
             + D +  P     +    S  +   +I VNN G      ++E++  D+  VM  N ++
Sbjct: 60  ALLIDFAD-P-----LAAKDSFTDAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKA 113
Query: 133 AFHLCQ-LAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKD 191
            F   Q  A  LL    +  +V ++S L          Y+A K  +  L K LA EWA  
Sbjct: 114 LFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAGLTKLLANEWAAK 173
Query: 192 NIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI 251
            I  N++AP YI T  TE L  +      +  R P GR G  ++++    FL   AA Y+
Sbjct: 174 GINVNAIAPGYIETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAAVFLSSAAADYV 233
Query: 252 TGQTVCIDGGF 262
            G  + +DGG+
Sbjct: 234 HGAILNVDGGW 244

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score =  105 bits (261), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 67/241 (27%), Positives = 118/241 (48%), Gaps = 14/241 (5%)
Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
           + LVTGG +G+GLA+    +  G  V    R+  E  E    ++          CD++  
Sbjct: 23  SVLVTGGNRGIGLAIARAFADAGDKVAITYRS-GEPPEGFLAVK----------CDITDT 71
Query: 82  PQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAH 141
            Q +     +    +G + + + N G +  +  +  + EDF+ V+ TN    F + + A+
Sbjct: 72  EQVEQAYKEIEET-HGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRAN 130
Query: 142 PLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPW 201
             +  +    +VL+SS +G++ +     Y+A+K  +   A++LA E    NI  N VAP 
Sbjct: 131 RAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARELGSRNITFNVVAPG 190
Query: 202 YIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGG 261
           ++ T  T+ L    +    + S+ P+GR   P+E+++ V FL    ASYITG  + +DGG
Sbjct: 191 FVDTDMTKVLTDEQRA--NIVSQVPLGRYARPEEIAATVRFLASDDASYITGAVIPVDGG 248
Query: 262 F 262
Sbjct: 249 L 249

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score =  105 bits (261), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 121/246 (49%), Gaps = 3/246 (1%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           SLQG  ALVTG ++G+G A+  EL  LGA V   + + +   +    L+  G++  G V 
Sbjct: 24  SLQGKVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGAGLVL 83
Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           DVSS       +  +     G+  I VNN G +     +    +++  V++TN  S + L
Sbjct: 84  DVSSDESVAATLEHIQQHL-GQPLIVVNNAGITRDNLLVRMKDDEWFDVVNTNLNSLYRL 142
Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTN 196
            +     +  +    I+ + S +G +     T Y+A K  +    + LA E     I  N
Sbjct: 143 SKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAITVN 202
Query: 197 SVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTV 256
           +VAP +I T  T  L    +  + +  + P+GRLG+ +E++ +V FL    A+Y+TG TV
Sbjct: 203 AVAPGFIDTDMTRELPEAQR--EALLGQIPLGRLGQAEEIAKVVGFLASDGAAYVTGATV 260
Query: 257 CIDGGF 262
            ++GG 
Sbjct: 261 PVNGGM 266

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score =  104 bits (259), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 127/247 (51%), Gaps = 12/247 (4%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
            L G T+L+TG + G+G A+   L  LG+ V      E +L    + L+      T  VC
Sbjct: 11  DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDN---YTIEVC 67
Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           +++++ +   LI+  S+L     +I V N G +     +    +DF  V+  N ++ F L
Sbjct: 68  NLANKEECSNLISKTSNL-----DILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFIL 122
Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEWAKDNIRT 195
            + A   +       I+ +SS +GI + N G   Y A+K  +  + K+L+ E A   I  
Sbjct: 123 NREAIKKMIQKRYGRIINISSIVGI-AGNPGQANYCASKAGLIGMTKSLSYEVATRGITV 181
Query: 196 NSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT 255
           N+VAP +I++  T+ L  N K  + +  + P+G  G P++V+  VAFL    ASYITGQT
Sbjct: 182 NAVAPGFIKSDMTDKL--NEKQREAIVQKIPLGTYGIPEDVAYAVAFLASNNASYITGQT 239
Query: 256 VCIDGGF 262
           + ++GG 
Sbjct: 240 LHVNGGM 246

>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271

Iteration: 1
 Score =  103 bits (258), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 118/247 (47%), Gaps = 7/247 (2%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L+   A++TG   G+GL     L+  GA V      ET+L      +   G      V D
Sbjct: 9   LENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV---GRGAVHHVVD 65
Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTL--EYNAEDFSLVMSTNFESAFH 135
           +++    + LI+     F G+L+I  NN   S     L  +   + +    + N      
Sbjct: 66  LTNEVSVRALIDFTIDTF-GRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTML 124
Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRT 195
           +C+ A P L ++G  +IV +SSA    + ++ T Y+ TK A+  L + +A ++ +  +R 
Sbjct: 125 MCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRC 184
Query: 196 NSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT 255
           N++AP  +RTP  E  L     VD   +    GR+GEP E++ LV FL    A++ITGQ 
Sbjct: 185 NAIAPGLVRTPRLEVGLPQ-PIVDIFATHHLAGRIGEPHEIAELVCFLASDRAAFITGQV 243
Query: 256 VCIDGGF 262
           +  D G 
Sbjct: 244 IAADSGL 250

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score =  103 bits (257), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 121/241 (50%), Gaps = 4/241 (1%)
Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECI-HHLQMKGLKVTGSVCDVSS 80
           +ALVTG ++G+G ++  +L+  G  V        E  E +   ++ KG+       +V+ 
Sbjct: 6   SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVAD 65
Query: 81  RPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLA 140
             + +  I  V S F G L++ VNN G +          +++  V+ TN +  F+  Q A
Sbjct: 66  ADEVKAXIKEVVSQF-GSLDVLVNNAGITRDNLLXRXKEQEWDDVIDTNLKGVFNCIQKA 124
Query: 141 HPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAP 200
            P      + +I+ +SS +G V       Y ATK  +  L K+ A E A   I  N+VAP
Sbjct: 125 TPQXLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAP 184
Query: 201 WYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDG 260
            +I +  T+ L  + +  ++  ++ P+ R G+  ++++ VAFL    A YITGQT+ ++G
Sbjct: 185 GFIVSDXTDAL--SDELKEQXLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVNG 242
Query: 261 G 261
           G
Sbjct: 243 G 243

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/260 (30%), Positives = 114/260 (43%), Gaps = 7/260 (2%)
Query: 5   QQTESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHL 64
           +  E   R+  + L   + LVTGGTKG+G  +    +  GA V   +R+  EL+     L
Sbjct: 26  ESAEPAERKVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAEL 85
Query: 65  -QMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFS 123
            ++    V G   DVS          TV   F G L++   N G            E  S
Sbjct: 86  GELGAGNVIGVRLDVSDPGSCADAARTVVDAF-GALDVVCANAGIFPEARLDTMTPEQLS 144
Query: 124 LVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAK 182
            V+  N +   +  Q     L ASG   ++L SS  G V+   G + Y A+K A     +
Sbjct: 145 EVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMR 204
Query: 183 NLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGK-FVDEVKSRTPMGRLGEPKEVSSLVA 241
             A E A   +  N++ P  I    TE L+  G+ ++  +    PMG LG P ++  L A
Sbjct: 205 TAAIELAPRGVTVNAILPGNI---LTEGLVDMGEEYISGMARSIPMGMLGSPVDIGHLAA 261
Query: 242 FLCMPAASYITGQTVCIDGG 261
           FL    A YITGQ + +DGG
Sbjct: 262 FLATDEAGYITGQAIVVDGG 281

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 112/248 (45%), Gaps = 11/248 (4%)
Query: 23  ALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIH-HLQMKGLKVTGSVCDVSSR 81
           A+VTG + G GLA+       G  V     +   L E    H      KV     DV+  
Sbjct: 5   AIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADE 64
Query: 82  PQRQTLINTVSSLFNGKLNIFVNNVGTS------VLKPTLEYNAEDFSLVMSTNFESAFH 135
                 I      F G +++ VNN G +      VL  T     E F  VM+ N    F 
Sbjct: 65  GDVNAAIAATMEQF-GAIDVLVNNAGITGNSEAGVLHTT---PVEQFDKVMAVNVRGIFL 120
Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRT 195
            C+   P +   GA  IV ++S   +V+    + Y+ +KGA+ QL K++A ++A   IR 
Sbjct: 121 GCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRC 180
Query: 196 NSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT 255
           N+V P  I TP T+  L   +  D+V +R P   +G   +V+  V FL    A+Y+ G  
Sbjct: 181 NAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMFLAGEDATYVNGAA 240
Query: 256 VCIDGGFT 263
           + +DG +T
Sbjct: 241 LVMDGAYT 248

>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269

Iteration: 1
 Score =  101 bits (252), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 121/254 (47%), Gaps = 13/254 (5%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSV 75
            L+    ++TGG+ GLG A+        A  V      E E  +    ++  G +     
Sbjct: 12  DLKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAIIVQ 71
Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
            DV+       L+ T    F G L++ +NN G     P+ E + ++++ V+ TN   AF 
Sbjct: 72  GDVTKEEDVVNLVQTAIKEF-GTLDVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFL 130
Query: 136 LCQLA-HPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIR 194
             + A    +      +++ MSS   ++   +   Y+A+KG M  + + LA E+A   IR
Sbjct: 131 GSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIR 190
Query: 195 TNSVAPWYIRTPFTEPLLGNGKFVD-----EVKSRTPMGRLGEPKEVSSLVAFLCMPAAS 249
            N++ P  + TP         KF D     +V+S  PMG +G+P+EV+++ AFL    AS
Sbjct: 191 VNNIGPGAMNTPINAE-----KFADPVQRADVESMIPMGYIGKPEEVAAVAAFLASSQAS 245
Query: 250 YITGQTVCIDGGFT 263
           Y+TG T+  DGG T
Sbjct: 246 YVTGITLFADGGMT 259

>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269

Iteration: 1
 Score =  101 bits (252), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 121/254 (47%), Gaps = 13/254 (5%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSV 75
            L+    ++TGG+ GLG A+        A  V      E E  +    ++  G +     
Sbjct: 12  DLKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAIIVQ 71
Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
            DV+       L+ T    F G L++ +NN G     P+ E + ++++ V+ TN   AF 
Sbjct: 72  GDVTKEEDVVNLVQTAIKEF-GTLDVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFL 130
Query: 136 LCQLA-HPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIR 194
             + A    +      +++ MSS   ++   +   Y+A+KG M  + + LA E+A   IR
Sbjct: 131 GSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIR 190
Query: 195 TNSVAPWYIRTPFTEPLLGNGKFVD-----EVKSRTPMGRLGEPKEVSSLVAFLCMPAAS 249
            N++ P  + TP         KF D     +V+S  PMG +G+P+EV+++ AFL    AS
Sbjct: 191 VNNIGPGAMNTPINAE-----KFADPVQRADVESMIPMGYIGKPEEVAAVAAFLASSQAS 245
Query: 250 YITGQTVCIDGGFT 263
           Y+TG T+  DGG T
Sbjct: 246 YVTGITLFADGGMT 259

>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269

Iteration: 1
 Score =  101 bits (252), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 121/254 (47%), Gaps = 13/254 (5%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSV 75
            L+    ++TGG+ GLG A+        A  V      E E  +    ++  G +     
Sbjct: 12  DLKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAIIVQ 71
Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
            DV+       L+ T    F G L++ +NN G     P+ E + ++++ V+ TN   AF 
Sbjct: 72  GDVTKEEDVVNLVQTAIKEF-GTLDVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFL 130
Query: 136 LCQLA-HPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIR 194
             + A    +      +++ MSS   ++   +   Y+A+KG M  + + LA E+A   IR
Sbjct: 131 GSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIR 190
Query: 195 TNSVAPWYIRTPFTEPLLGNGKFVD-----EVKSRTPMGRLGEPKEVSSLVAFLCMPAAS 249
            N++ P  + TP         KF D     +V+S  PMG +G+P+EV+++ AFL    AS
Sbjct: 191 VNNIGPGAMNTPINAE-----KFADPVQRADVESMIPMGYIGKPEEVAAVAAFLASSQAS 245
Query: 250 YITGQTVCIDGGFT 263
           Y+TG T+  DGG T
Sbjct: 246 YVTGITLFADGGMT 259

>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263

Iteration: 1
 Score =  101 bits (252), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 119/264 (45%), Gaps = 22/264 (8%)
Query: 16  WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSV 75
           + L G  A+VTGG+KG+G A+   L   GATV             +  L+  G  V    
Sbjct: 8   FDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVE--- 64
Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
            DV+ R      +        G  ++   N G S ++P ++   E++      N    F 
Sbjct: 65  VDVTKRASVDAAMQKAIDALGG-FDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFL 123
Query: 136 LCQLAHPLLRASGAASIVLMSSALGI-VSANVGTVYSATKGAMNQLAKNLACEWAKDNIR 194
             Q+A     AS    +++ +++L   V A +   YSA+K A+    + LA E A  NIR
Sbjct: 124 ANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIR 183
Query: 195 TNSVAPWYIRTPFTE-------------PLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVA 241
            N V P +++T   E             P     ++V    S TP+GR+ EP++V+ +V 
Sbjct: 184 VNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYV----SLTPLGRIEEPEDVADVVV 239
Query: 242 FLCMPAASYITGQTVCIDGGFTVN 265
           FL   AA ++TGQ + + GG  ++
Sbjct: 240 FLASDAARFMTGQGINVTGGVRMD 263

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score =  100 bits (248), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 121/255 (47%), Gaps = 12/255 (4%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           SL+    +VTG   G+G A+ ++ ++  + V      E  LN+ +  L+  G +V G   
Sbjct: 4   SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKA 63
Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGT-SVLKPTLEYNAEDFSLVMSTNFESAFH 135
           DVS +   +  +      ++ ++++  NN G    + P  E + E +  V++ N  SAF+
Sbjct: 64  DVSKKKDVEEFVRRTFETYS-RIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFY 122
Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRT 195
             +   P++   G   IV  +S  GI     G  Y+  K  +  L +++A  +    IR 
Sbjct: 123 SSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRA 182
Query: 196 NSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPM------GRLGEPKEVSSLVAFLCMPAAS 249
            +V P  ++T      LG+ K   E+  RT         RL EP+++++++ FL    AS
Sbjct: 183 VAVLPGTVKTNIG---LGSSK-PSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASDEAS 238
Query: 250 YITGQTVCIDGGFTV 264
           ++ G  V +DGG TV
Sbjct: 239 FVNGDAVVVDGGLTV 253

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score =  100 bits (248), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 117/257 (45%), Gaps = 16/257 (6%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATV--HTCSRTETELNECIHHLQMKGLKVTGS 74
           +L+G TALVTG T G+GL + + L+  GA +  +        L E   H    G+K    
Sbjct: 1   TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARH----GVKAVHH 56
Query: 75  VCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAF 134
             D+S   Q + L       F G ++I VNN G   + P  ++  E +  +++ N  + F
Sbjct: 57  PADLSDVAQIEALFALAEREFGG-VDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVF 115
Query: 135 HLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIR 194
           H  +LA P +RA     I+ ++S  G+V +     Y A K  +  L K +  E A  N+ 
Sbjct: 116 HGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVT 175
Query: 195 TNSVAPWYIRTPFTEPLL----GNGKFV-----DEVKSRTPMGRLGEPKEVSSLVAFLCM 245
            N++ P ++ TP  +  +     NG        D +  + P      P+ +  LV FLC 
Sbjct: 176 CNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCS 235
Query: 246 PAASYITGQTVCIDGGF 262
            A S + G    +DGG+
Sbjct: 236 EAGSQVRGAAWNVDGGW 252

>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244

Iteration: 1
 Score = 99.8 bits (247), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 121/254 (47%), Gaps = 20/254 (7%)
Query: 15  RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETEL----NECIHHLQMKGLK 70
           + +  G+ ALVTG  KG+G   V+ L   GA V   +RT ++L     EC       G++
Sbjct: 2   KLNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC------PGIE 55
Query: 71  VTGSVC-DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTN 129
               VC D+      +  +  +     G +++ VNN    +++P LE   E F    S N
Sbjct: 56  ---PVCVDLGDWDATEKALGGI-----GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVN 107
Query: 130 FESAFHLCQL-AHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEW 188
             S F + Q+ A  ++      SIV +SS +  V+      YS+TKGAM  L K +A E 
Sbjct: 108 LRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMEL 167
Query: 189 AKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAA 248
               IR NSV P  + T   + +  + +F  ++K R P+ +  E ++V + + FL    +
Sbjct: 168 GPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRS 227
Query: 249 SYITGQTVCIDGGF 262
           +  +G  + +D G+
Sbjct: 228 ASTSGGGILVDAGY 241

>pdb|3GDF|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol Dehydrogenase From Cladosporium Herbarum. Length = 267

Iteration: 1
 Score = 99.8 bits (247), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 125/274 (45%), Gaps = 20/274 (7%)
Query: 1   MAQPQQTESHSRQNRWSLQGMTALVTG--GTKGLGLAVVEELSMLGATVHT--CSRTETE 56
           M   Q T+  S  ++ SL+G   +VTG  G KG+G+      + +GA V     SR +  
Sbjct: 1   MPGQQATKHESLLDQLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGA 60
Query: 57  LNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLE 116
                   +  G+K     C V S    + L+  V + F G+++ F+ N G +     L+
Sbjct: 61  EENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVADF-GQIDAFIANAGATADSGILD 119
Query: 117 YNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVS--ANVGTVYSATK 174
            + E ++ V+  +    FH  +      +  G  S+V+ +S  G ++      T Y+  K
Sbjct: 120 GSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVAK 179
Query: 175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEV-----KSRTPMGR 229
                +A++LA EW +D  R NS++P YI T  ++       FV +       S  PMGR
Sbjct: 180 AGCIHMARSLANEW-RDFARVNSISPGYIDTGLSD-------FVPKETQQLWHSMIPMGR 231
Query: 230 LGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFT 263
            G  KE+     +    A++Y TG  + IDGG+T
Sbjct: 232 DGLAKELKGAYVYFASDASTYTTGADLLIDGGYT 265

>pdb|1O5I|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Reductase (Tm1169) From Thermotoga Maritima At 2.50 A Resolution Length = 249

Iteration: 1
 Score = 99.8 bits (247), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 117/242 (48%), Gaps = 21/242 (8%)
Query: 24  LVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQ 83
           LV   ++G+G AV + LS  GA V  C+R E  L    H            VCD+  R  
Sbjct: 23  LVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRY---------VVCDL--RKD 71
Query: 84  RQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPL 143
              L   V      +++I V N G        E   EDF   + + F +   + +   P 
Sbjct: 72  LDLLFEKVK-----EVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPA 126
Query: 144 LRASGAASIVLMSSALGIVS--ANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPW 201
           ++  G   IV ++S   ++S   N+ T  SA + A+    K L+ E A   I  N VAP 
Sbjct: 127 MKEKGWGRIVAITS-FSVISPIENLYTSNSA-RMALTGFLKTLSFEVAPYGITVNCVAPG 184
Query: 202 YIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGG 261
           +  T   + LL   K   +V+S+ PM R+ +P+E++S+VAFLC   ASY+TGQT+ +DGG
Sbjct: 185 WTETERVKELLSEEK-KKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQTIVVDGG 243
Query: 262 FT 263
            +
Sbjct: 244 LS 245

>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269

Iteration: 1
 Score = 99.8 bits (247), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 120/249 (48%), Gaps = 21/249 (8%)
Query: 23  ALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRP 82
           A+VTGG+ G+GLAVV+ L   GA V + S  E        H ++          DV++  
Sbjct: 17  AIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFKI----------DVTNEE 66
Query: 83  QRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHP 142
           + +  +   +  + G+++I VNN G     P      E +  ++  N   ++ + +   P
Sbjct: 67  EVKEAVEKTTKKY-GRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIP 125
Query: 143 LLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWY 202
           ++ A G  SI+ ++S     +      Y  +K A+  L +++A ++A   IR N+V P  
Sbjct: 126 VMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAP-KIRCNAVCPGT 184
Query: 203 IRTPFT---------EPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG 253
           I TP           E      + ++E   + PMGR+G P+EV+ +VAFL    +S+ITG
Sbjct: 185 IMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLASDRSSFITG 244
Query: 254 QTVCIDGGF 262
             + +DGG 
Sbjct: 245 ACLTVDGGL 253

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 99.4 bits (246), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 112/245 (45%), Gaps = 5/245 (2%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTET-ELNECIHHLQMKGLKVTGSVC 76
           L+   A++TGG  G+G A+ E  ++ GA +         E    I +L  + L V    C
Sbjct: 5   LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVK---C 61
Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           DVS     +     V S F G+ +I VNN G   L P  E   E +      N +S F +
Sbjct: 62  DVSQPGDVEAFGKQVISTF-GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLM 120
Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTN 196
            +   P ++ +G   I+ ++S    +     T Y +TK A     + LA +  KD I  N
Sbjct: 121 AKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVN 180
Query: 197 SVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTV 256
           ++AP  +RT  TE    +  F         + RL  P +++   AFL    AS+ITGQT+
Sbjct: 181 AIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDASFITGQTL 240
Query: 257 CIDGG 261
            +DGG
Sbjct: 241 AVDGG 245

>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256

Iteration: 1
 Score = 98.6 bits (244), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 117/254 (46%), Gaps = 19/254 (7%)
Query: 20  GMTALVTGGTKGLGLAVVEELSMLGATVHTCS-RTE-TELNECIHHLQMKGLKVTGSVCD 77
           G   LVTGG +G+G A+ +  +  GA V  C  R E  E+ E I     +         D
Sbjct: 6   GKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQ--------VD 57
Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           +    +R   +   +    G++++ VNN   +     L     ++  V+  N  +  HL 
Sbjct: 58  LEDERERVRFVEEAAYAL-GRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLS 116
Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNS 197
            LA   +R  G  +IV ++S  G+ +      Y+A+KG +  L ++LA + A   IR N+
Sbjct: 117 ALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNA 176
Query: 198 VAPWYIRTPFTEPLLGNGKFVDEVKSRT------PMGRLGEPKEVSSLVAFLCMPAASYI 251
           VAP  I T     L       D  ++R        + RLG+P+EV+  V FL    AS+I
Sbjct: 177 VAPGAIATEAV--LEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFI 234
Query: 252 TGQTVCIDGGFTVN 265
           TG  + +DGG T +
Sbjct: 235 TGAILPVDGGMTAS 248

>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258

Iteration: 1
 Score = 98.2 bits (243), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 113/244 (46%), Gaps = 2/244 (0%)
Query: 19  QGMTALVTGGTKGLGLAVVEELSMLGAT-VHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           Q   ALVTG ++G+G A    L+  G   V   +R++    E    ++  G+KV     +
Sbjct: 3   QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKAN 62
Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           V    + + +   +   F G+L++FVNN  + VL+P +E     +   M+ N ++     
Sbjct: 63  VGQPAKIKEMFQQIDETF-GRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCA 121
Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNS 197
           Q A  L+  +G   IV +SS   I      T    +K A+  L + LA E +   I  N+
Sbjct: 122 QEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIVNA 181
Query: 198 VAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVC 257
           V+   I T   +        +++ +  TP GR+ E K++   V FL    A  I GQT+ 
Sbjct: 182 VSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSKADMIRGQTII 241
Query: 258 IDGG 261
           +DGG
Sbjct: 242 VDGG 245

>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245

Iteration: 1
 Score = 98.2 bits (243), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 86/171 (50%), Gaps = 10/171 (5%)
Query: 97  GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMS 156
           G L+  VNN G +     +    ED+  V+  N  + F   + A  L+  +    IV ++
Sbjct: 79  GGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNIT 138
Query: 157 SALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGK 216
           S +GI+       Y A+K  +    + +A E+A+  I  N+VAP +I T  TE      +
Sbjct: 139 SVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTE------R 192
Query: 217 FVDEVK----SRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFT 263
              EVK     + P GR G P+EV+  VAFL    A YITGQT+C+DGG T
Sbjct: 193 LPQEVKEAYLKQIPAGRFGRPEEVAEAVAFLVSEKAGYITGQTLCVDGGLT 243

>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253

Iteration: 1
 Score = 97.4 bits (241), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 113/257 (43%), Gaps = 26/257 (10%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATV-------HTCSRTETELNECIHHLQMKGL 69
            L G T ++TGG +GLG     +    GA V          + T  EL +   +  +   
Sbjct: 2   DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHL--- 58
Query: 70  KVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTN 129
                  DV+     Q ++      F G ++  VNN G S        + E F  V+  N
Sbjct: 59  -------DVTIEEDWQRVVAYAREEF-GSVDGLVNNAGISTGMFLETESVERFRKVVEIN 110
Query: 130 FESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWA 189
               F   +   P ++ +G  SIV +SSA G++   + + Y A+K  +  L+K  A E  
Sbjct: 111 LTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELG 170
Query: 190 KDNIRTNSVAPWYIRTPFTEPL---LGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP 246
            D IR NSV P    TP T       G G +       TPMGR+GEP E++  V  L   
Sbjct: 171 TDRIRVNSVHPGMTYTPMTAETGIRQGEGNY-----PNTPMGRVGEPGEIAGAVVKLLSD 225
Query: 247 AASYITGQTVCIDGGFT 263
            +SY+TG  + +DGG+T
Sbjct: 226 TSSYVTGAELAVDGGWT 242

>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271

Iteration: 1
 Score = 97.4 bits (241), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 117/251 (46%), Gaps = 16/251 (6%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATV-----HTCSRTETELNECIHHLQMKGLKV 71
           SL G TA VTGG++G+G A+ + L++ GA V     +   R +  ++E     Q  G  V
Sbjct: 28  SLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEI---EQAGGRAV 84
Query: 72  TGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFE 131
                +  +    Q +  TV +L  G L+I VN+ G     P  E    DF  V + NF 
Sbjct: 85  AIRADNRDAEAIEQAIRETVEAL--GGLDILVNSAGIWHSAPLEETTVADFDEVXAVNFR 142
Query: 132 SAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAK 190
           + F   + A   L   G   I+ + S L  +    G ++YSA+K A+  L K LA +   
Sbjct: 143 APFVAIRSASRHLGDGG--RIITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDLGP 200
Query: 191 DNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY 250
             I  N V P    T        +G   +  + R   G  GEP++++ LVA+L  P   +
Sbjct: 201 RGITVNIVHPGSTDTDXNPA---DGDHAEAQRERIATGSYGEPQDIAGLVAWLAGPQGKF 257
Query: 251 ITGQTVCIDGG 261
           +TG ++ IDGG
Sbjct: 258 VTGASLTIDGG 268

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score = 97.4 bits (241), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 123/258 (47%), Gaps = 13/258 (5%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETE-LNECIHHLQMK-GLKVTGSV 75
           L+G  A+VTG T G+GLA+  EL+  GA V      + E +      L+ K G+K     
Sbjct: 2   LKGKKAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFGVKAYYLN 61
Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
            D+S     +  I   +    G L+I VNN G     P  E+  + ++ +++ N  + FH
Sbjct: 62  ADLSDAQATRDFIAKAAEALGG-LDILVNNAGIQHTAPIEEFPVDKWNAIIALNLSAVFH 120
Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRT 195
               A P+++  G   I+ ++SA G+V++   + Y A K  +  L K  A E A   I  
Sbjct: 121 GTAAALPIMQKQGWGRIINIASAHGLVASVNKSAYVAAKHGVVGLTKVTALENAGKGITC 180
Query: 196 NSVAPWYIRTPFTEP---LLGNGKFVD-EVKSR------TPMGRLGEPKEVSSLVAFLCM 245
           N++ P ++RTP  E     +   K +D E  +R       P  +   P+++     FL  
Sbjct: 181 NAICPGWVRTPLVEKQIEAISQQKGIDIEAAARELLAEKQPSLQFVTPEQLGGAAVFLSS 240
Query: 246 PAASYITGQTVCIDGGFT 263
            AA  +TG T+ +DGG+T
Sbjct: 241 AAADQMTGTTLSLDGGWT 258

>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267

Iteration: 1
 Score = 97.4 bits (241), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 112/247 (45%), Gaps = 10/247 (4%)
Query: 24  LVTGGTKGLGLAVVEELSMLGATVH--TCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
           L+TGG  GLG A    L+  GA +     S    E ++          +V  +V DVS  
Sbjct: 17  LITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDE 76
Query: 82  PQRQTLINTVSSLFNGKLNIFVNNVGTSVLK-PTLEYNAEDFSLVMSTNFESAFHLCQLA 140
            Q +  +   +  F G+++ F NN G    + PT  + A +F  V+S N    F   +  
Sbjct: 77  AQVEAYVTATTERF-GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKV 135
Query: 141 HPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAP 200
             ++R  G+  +V  +S  GI      + Y+A K  +  L +N A E+ +  IR N++AP
Sbjct: 136 LKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAP 195
Query: 201 WYIRTPFTEPLLGN------GKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ 254
             I TP  E  +         K  +E     P  R GE  E++++VAFL    ASY+   
Sbjct: 196 GAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDASYVNAT 255
Query: 255 TVCIDGG 261
            V IDGG
Sbjct: 256 VVPIDGG 262

>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266

Iteration: 1
 Score = 97.1 bits (240), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 119/250 (47%), Gaps = 8/250 (3%)
Query: 16  WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSV 75
           + L G  ALVTG T G+G A+       GA V      E +L E    L   G  V    
Sbjct: 23  FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL---GKDVFVFS 79
Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
            ++S R   + L         G ++I VNN G +     +    +D+  V++ N  +A  
Sbjct: 80  ANLSDRKSIKQLAEVAEREMEG-IDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAAST 138
Query: 136 LC-QLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIR 194
           L  +L H ++R      I+ ++S +G+V     T Y A K  +   +K LA E A  NI 
Sbjct: 139 LTRELIHSMMRRR-YGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEIASRNIT 197
Query: 195 TNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ 254
            N +AP +I++  T+ L  N K  + + +  PM R+G  +E++    +L    A+Y+TGQ
Sbjct: 198 VNCIAPGFIKSAMTDKL--NEKQKEAIMAMIPMKRMGIGEEIAFATVYLASDEAAYLTGQ 255
Query: 255 TVCIDGGFTV 264
           T+ I+GG  +
Sbjct: 256 TLHINGGMAM 265

>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269

Iteration: 1
 Score = 97.1 bits (240), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 119/244 (48%), Gaps = 8/244 (3%)
Query: 23  ALVTGGTKGLGLAVVEELSMLGATVHT-CSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
           ALVTG ++G+G A+  EL+  GA V    + +    +E +  +   G +      DVS  
Sbjct: 31  ALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQE 90
Query: 82  PQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAH 141
            + + L   V   + G+L++ VNN G +     L    +D+  V+  N    F   + A 
Sbjct: 91  SEVEALFAAVIERW-GRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAA 149
Query: 142 PLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPW 201
            ++    +  I+ ++S +G +       YSA K  +  L K +A E A   I  N+VAP 
Sbjct: 150 KIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPG 209
Query: 202 YIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCM-PAASYITGQTVCIDG 260
           +I T  T  L    K ++ +    P+GR GE  EV+ +V FL   PAA+YITGQ + IDG
Sbjct: 210 FIATDMTSELAAE-KLLEVI----PLGRYGEAAEVAGVVRFLAADPAAAYITGQVINIDG 264
Query: 261 GFTV 264
           G  +
Sbjct: 265 GLVM 268

>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269

Iteration: 1
 Score = 97.1 bits (240), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 117/245 (47%), Gaps = 11/245 (4%)
Query: 23  ALVTGGTKGLGLAVVEELSMLGATVHTC-SRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
           A VTGG  GLG A+   L   G  V    S     ++  + H +  G        DV+  
Sbjct: 28  AFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADF 87
Query: 82  PQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQ--L 139
              +     V + F GK+++ +NN G +     ++    D+  VM T+ ++ F++ +  +
Sbjct: 88  ESCERCAEKVLADF-GKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFI 146
Query: 140 AHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVA 199
           A  + R  G   IV + S  G   A     Y++ K  ++   K LA E AK  I  N+V+
Sbjct: 147 AGMVERRFG--RIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALETAKRGITVNTVS 204
Query: 200 PWYIRTPFTEPLLGNGKFVDEVK--SRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVC 257
           P Y+ T   E +  +   V E K   + P+GRLG P EV++L+AFLC   A ++TG  + 
Sbjct: 205 PGYLATAMVEAVPQD---VLEAKILPQIPVGRLGRPDEVAALIAFLCSDDAGFVTGADLA 261
Query: 258 IDGGF 262
           I+GG 
Sbjct: 262 INGGM 266

>pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 244

Iteration: 1
 Score = 96.7 bits (239), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 116/247 (46%), Gaps = 12/247 (4%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC- 76
           L G   LVTG  KG+G   V+ L   GA V   SRT+ +L+  +   +  G++    VC 
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVR--ECPGIE---PVCV 59
Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           D+      +  + +V     G +++ VNN   ++L+P LE   E F      N  +   +
Sbjct: 60  DLGDWEATERALGSV-----GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQV 114
Query: 137 CQLAHPLLRASGA-ASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRT 195
            Q+    L A G   +IV +SS     +    +VY +TKGA++ L K +A E     IR 
Sbjct: 115 SQIVARGLIARGVPGAIVNVSSQXSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRV 174
Query: 196 NSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT 255
           N+V P  + T   +    +      + +R P+G+  E + V + + FL    +   TG T
Sbjct: 175 NAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGST 234
Query: 256 VCIDGGF 262
           + ++GGF
Sbjct: 235 LPVEGGF 241

>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262

Iteration: 1
 Score = 96.7 bits (239), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 116/261 (44%), Gaps = 20/261 (7%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
             G   LVTG    +GLA    L+  G  +         L +    ++ KG++    VCD
Sbjct: 5   FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCD 64
Query: 78  VSSRPQRQTLINTVSSLFN--GKLNIFVNNVG-TSVLKPTLEYNAEDFSLVMSTNFESAF 134
           V+S    + +I TV S+    GK++   NN G      P  +Y ++DF+ V++ N   AF
Sbjct: 65  VTSE---EAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAF 121
Query: 135 HLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIR 194
           H+ +     +       IV  +S  G+        Y  +KGA+  L +  A + A  NIR
Sbjct: 122 HVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIR 181
Query: 195 TNSVAPWYIRTPFT-------EPLLGNGKFVDEVK-------SRTPMGRLGEPKEVSSLV 240
            N+++P Y+   F        +  +G+  F  + K          PM R G+  E+  +V
Sbjct: 182 VNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVV 241
Query: 241 AFLCMPAASYITGQTVCIDGG 261
           AFL    +S++TG  + I GG
Sbjct: 242 AFLLGDDSSFMTGVNLPIAGG 262

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score = 96.7 bits (239), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 123/247 (49%), Gaps = 23/247 (9%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           + +G  ALVTG ++G+G A+ E L+  GA V   + +E        +L   G    G + 
Sbjct: 2   NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANG---KGLML 58
Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           +V+     ++++  + + F G+++I VNN G +     +    E+++ ++ TN  S F L
Sbjct: 59  NVTDPASIESVLEKIRAEF-GEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRL 117
Query: 137 CQLAHPLLRASGAASIVLMSSALG-IVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRT 195
            +    ++RA       +M    G I++      Y+A K  +   +K+LA E A   I  
Sbjct: 118 SK---AVMRA-------MMKKRHGRIITIGGQANYAAAKAGLIGFSKSLAREVASRGITV 167
Query: 196 NSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT 255
           N VAP +I T   +           + ++ P GRLG  +E+++ VAFL    A+YITG+T
Sbjct: 168 NVVAPGFIETSDDQRA--------GILAQVPAGRLGGAQEIANAVAFLASDEAAYITGET 219
Query: 256 VCIDGGF 262
           + ++GG 
Sbjct: 220 LHVNGGM 226

>pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme Length = 244

Iteration: 1
 Score = 96.7 bits (239), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 116/247 (46%), Gaps = 12/247 (4%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC- 76
           L G   LVTG  KG+G   V+ L   GA V   SRT+ +L+  +   +  G++    VC 
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVR--ECPGIE---PVCV 59
Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           D+      +  + +V     G +++ VNN   ++L+P LE   E F      N  +   +
Sbjct: 60  DLGDWEATERALGSV-----GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQV 114
Query: 137 CQLAHPLLRASGA-ASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRT 195
            Q+    L A G   +IV +SS     +    +VY +TKGA++ L K +A E     IR 
Sbjct: 115 SQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRV 174
Query: 196 NSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT 255
           N+V P  + T   +    +      + +R P+G+  E + V + + FL    +   TG T
Sbjct: 175 NAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGST 234
Query: 256 VCIDGGF 262
           + ++GGF
Sbjct: 235 LPVEGGF 241

>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 116/250 (46%), Gaps = 12/250 (4%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L G  ALV+GG +G+G + V  +   GA V      + E       L      V     D
Sbjct: 5   LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVH---LD 61
Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           V+   Q +  ++T  + F G L++ VNN G   +    +Y   ++  ++  N    F   
Sbjct: 62  VTQPAQWKAAVDTAVTAFGG-LHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGI 120
Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNS 197
           +     ++ +G  SI+ +SS  G+        Y+ATK A+  L K+ A E     IR NS
Sbjct: 121 RAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNS 180
Query: 198 VAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVC 257
           + P  ++TP T+       +V E   +T +GR  EP EVS+LV +L    +SY TG    
Sbjct: 181 IHPGLVKTPMTD-------WVPEDIFQTALGRAAEPVEVSNLVVYLASDESSYSTGAEFV 233
Query: 258 IDGGFTVNGF 267
           +DGG TV G 
Sbjct: 234 VDGG-TVAGL 242

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 122/259 (47%), Gaps = 15/259 (5%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTET-ELNECIHHLQMK-GLKVTGSV 75
           L+G  A+VTG T G+GL +   L+  GA +      +  E+ +    L  + G+KV    
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61
Query: 76  CDVSSRPQRQTLI-NTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAF 134
            D+S     + L+ N V  +  G+++I VNN G        ++  E +  +++ N  + F
Sbjct: 62  ADLSKGEAVRGLVDNAVRQM--GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVF 119
Query: 135 HLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIR 194
           H    A P ++  G   I+ ++SA G+V++   + Y A K  +    K  A E A   I 
Sbjct: 120 HGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGIT 179
Query: 195 TNSVAPWYIRTPFTEP---LLGNGKFVDE-------VKSRTPMGRLGEPKEVSSLVAFLC 244
            N++ P ++RTP  E     L     VD+       +  + P  +   P+++     FL 
Sbjct: 180 ANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLA 239
Query: 245 MPAASYITGQTVCIDGGFT 263
             AA+ ITG TV +DGG+T
Sbjct: 240 SDAAAQITGTTVSVDGGWT 258

>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 95.1 bits (235), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 108/241 (44%), Gaps = 14/241 (5%)
Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
           + LVTGG +G+GLA+ + L+  G  V    R              KGL   G  CDV+  
Sbjct: 17  SVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP---------KGL--FGVECDVTDS 65
Query: 82  PQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAH 141
                    V     G + + V+N G S     +    E F  V++ N   AF + Q A 
Sbjct: 66  DAVDRAFTAVEE-HQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRAS 124
Query: 142 PLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPW 201
             ++ +    ++ + S  G         Y+A+K  +  +A+++A E +K N+  N VAP 
Sbjct: 125 RSMQRNKFGRMIFIGSVSGSWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPG 184
Query: 202 YIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGG 261
           YI T  T  L  + +         P  R+G P EV+ +V+FL    ASYI+G  + +DGG
Sbjct: 185 YIDTDMTRAL--DERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGG 242
Query: 262 F 262
Sbjct: 243 M 243

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 94.7 bits (234), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 128/269 (47%), Gaps = 20/269 (7%)
Query: 11  SRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGL- 69
           S   R+S  G + ++TG + G+G +     +  GA V    R E  L E    +   G+ 
Sbjct: 19  SHMARFS--GKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVP 76
Query: 70  --KVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYN--AEDFSLV 125
             K+   V DV+    +  +INT  + F GK++I VNN G ++   T   +   E +   
Sbjct: 77  AEKINAVVADVTEASGQDDIINTTLAKF-GKIDILVNNAGANLADGTANTDQPVELYQKT 135
Query: 126 MSTNFESAFHLCQLAHP-LLRASGAASIVLMSSALGIVSANVGTVYSA-TKGAMNQLAKN 183
              NF++   + Q     L++  G   IV +SS +    A+ G  Y A  K A++Q  + 
Sbjct: 136 FKLNFQAVIEMTQKTKEHLIKTKG--EIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRC 193
Query: 184 LACEWAKDNIRTNSVAPWYIRTPFTE----PLLGNGKFVDEVKSRT---PMGRLGEPKEV 236
            A +  +  +R NSV+P  + T F      P   + K    + SR    P+G  G+P+E+
Sbjct: 194 TAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEI 253
Query: 237 SSLVAFLC-MPAASYITGQTVCIDGGFTV 264
           ++++ FL     +SYI GQ++  DGG T+
Sbjct: 254 ANIIVFLADRNLSSYIIGQSIVADGGSTL 282

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score = 94.4 bits (233), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 112/244 (45%), Gaps = 7/244 (2%)
Query: 24  LVTGGTKGLGLAVVEELSMLGATVHT-CSRTETELNECIHHLQMKGLKVTGSVCDVSSRP 82
           +VTG ++G+G A+   L   G  V    +R+     E    ++  G +      DVS   
Sbjct: 5   VVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEA 64
Query: 83  QRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHP 142
             + ++ T    + G +++ VNN G +     +      +  V+  N    F   Q A  
Sbjct: 65  DVEAMMKTAIDAW-GTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATK 123
Query: 143 LLRASGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEWAKDNIRTNSVAPW 201
           ++       I+ ++S +G++  N+G   Y+A K  +   +K  A E A  NI  N V P 
Sbjct: 124 IMMKKRKGRIINIASVVGLIG-NIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPG 182
Query: 202 YIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCM-PAASYITGQTVCIDG 260
           +I +  T  L        ++    P+GR G+P+ V+ LV FL + PAASYITGQ   IDG
Sbjct: 183 FIASDMTAKL--GEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFTIDG 240
Query: 261 GFTV 264
           G  +
Sbjct: 241 GIAI 244

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score = 94.0 bits (232), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 122/259 (47%), Gaps = 15/259 (5%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTET-ELNECIHHLQMK-GLKVTGSV 75
           L+G  A+VTG T G+GL +   L+  GA +      +  E+ +    L  + G+KV    
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61
Query: 76  CDVSSRPQRQTLI-NTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAF 134
            D+S     + L+ N V  +  G+++I VNN G        ++  E +  +++ N  + F
Sbjct: 62  ADLSKGEAVRGLVDNAVRQM--GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVF 119
Query: 135 HLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIR 194
           H    A P ++  G   I+ ++SA G+V++   + Y A K  +    K  A E A   I 
Sbjct: 120 HGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGIT 179
Query: 195 TNSVAPWYIRTPFTEP---LLGNGKFVDE-------VKSRTPMGRLGEPKEVSSLVAFLC 244
            N++ P ++R+P  E     L     VD+       +  + P  +   P+++     FL 
Sbjct: 180 ANAICPGWVRSPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLA 239
Query: 245 MPAASYITGQTVCIDGGFT 263
             AA+ ITG TV +DGG+T
Sbjct: 240 SDAAAQITGTTVSVDGGWT 258

>pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida Parapsilosis With Anti-Prelog Stereo-Specificity Length = 279

Iteration: 1
 Score = 94.0 bits (232), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 121/252 (48%), Gaps = 10/252 (3%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           SL+G  A VTG + G+G AV E  +  GA V     +     +  H  +  G+      C
Sbjct: 31  SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKC 90
Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLK-PTLEY-NAEDFSLVMSTNFESAF 134
           ++S     +  I+     F G +++FV N G +  + P ++  N + ++ ++S +    +
Sbjct: 91  NISDPKSVEETISQQEKDF-GTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVY 149
Query: 135 HLCQLAHPLLRASGAASIVLMSSALGIVSANVGTV---YSATKGAMNQLAKNLACEWAKD 191
           +       + + +G  S+++ SS  G +  N+  +   Y+  K A   LAK+LA EWA  
Sbjct: 150 YCSHNIGKIFKKNGKGSLIITSSISGKI-VNIPQLQAPYNTAKAACTHLAKSLAIEWAP- 207
Query: 192 NIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI 251
             R N+++P YI T  T+    +     +    TP+GR G  +E+     +L   A+++ 
Sbjct: 208 FARVNTISPGYIDTDITD--FASKDMKAKWWQLTPLGREGLTQELVGGYLYLASNASTFT 265
Query: 252 TGQTVCIDGGFT 263
           TG  V IDGG+T
Sbjct: 266 TGSDVVIDGGYT 277

>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267

Iteration: 1
 Score = 94.0 bits (232), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 109/241 (45%), Gaps = 14/241 (5%)
Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
           + LVTGG +G+GLA+ + L+  G  V    R              KGL   G   DV+  
Sbjct: 37  SVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP---------KGL--FGVEVDVTDS 85
Query: 82  PQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAH 141
                    V     G + + V+N G S     +    E F  V++ N   AF + Q A 
Sbjct: 86  DAVDRAFTAVEE-HQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRAS 144
Query: 142 PLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPW 201
             ++ +    ++ ++S  G+        Y+A+K  +  +A+++A E +K N+  N VAP 
Sbjct: 145 RSMQRNKFGRMIFIASVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPG 204
Query: 202 YIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGG 261
           YI T  T  L  + +         P  R+G P EV+ +V+FL    ASYI+G  + +DGG
Sbjct: 205 YIDTDMTRAL--DERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGG 262
Query: 262 F 262
Sbjct: 263 M 263

>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 108/241 (44%), Gaps = 14/241 (5%)
Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
           + LVTGG +G+GLA+ + L+  G  V    R              KGL   G   DV+  
Sbjct: 17  SVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSG---------APKGL--FGVEVDVTDS 65
Query: 82  PQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAH 141
                    V     G + + V+N G S     +    E F  V++ N   AF + Q A 
Sbjct: 66  DAVDRAFTAVEE-HQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRAS 124
Query: 142 PLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPW 201
             ++ +    ++ + S  G+        Y+A+K  +  +A+++A E +K N+  N VAP 
Sbjct: 125 RSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPG 184
Query: 202 YIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGG 261
           YI T  T  L  + +         P  R+G P EV+ +V+FL    ASYI+G  + +DGG
Sbjct: 185 YIDTDMTRAL--DERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGG 242
Query: 262 F 262
Sbjct: 243 M 243

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 121/259 (46%), Gaps = 15/259 (5%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTET-ELNECIHHLQMK-GLKVTGSV 75
           L+G  A+VTG T G+GL +   L+  GA +      +  E+ +    L  + G+KV    
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61
Query: 76  CDVSSRPQRQTLI-NTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAF 134
            D+S     + L+ N V  +  G+++I VNN G        ++  E +  +++ N  + F
Sbjct: 62  ADLSKGEAVRGLVDNAVRQM--GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVF 119
Query: 135 HLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIR 194
           H    A P ++  G   I+ ++SA G+V++   + Y A K  +    K  A E A   I 
Sbjct: 120 HGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGIT 179
Query: 195 TNSVAPWYIRTPFTEP---LLGNGKFVDE-------VKSRTPMGRLGEPKEVSSLVAFLC 244
            N++ P ++R P  E     L     VD+       +  + P  +   P+++     FL 
Sbjct: 180 ANAICPGWVRAPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLA 239
Query: 245 MPAASYITGQTVCIDGGFT 263
             AA+ ITG TV +DGG+T
Sbjct: 240 SDAAAQITGTTVSVDGGWT 258

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/277 (27%), Positives = 126/277 (45%), Gaps = 29/277 (10%)
Query: 11  SRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGA---TVHTCSR---------TETELN 58
           +R NR  LQG  A +TG  +G G      L+  GA    +  C +         +  EL 
Sbjct: 39  ARMNR--LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELK 96
Query: 59  ECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYN 118
           E +  ++ +G ++     DV      Q +++   + F G ++I V+NVG S     +   
Sbjct: 97  ETVRLVEEQGRRIIARQADVRDLASLQAVVDEALAEF-GHIDILVSNVGISNQGEVVSLT 155
Query: 119 AEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIVSANVGTVYSATKGAM 177
            + +S ++ TN   A+H C+   P +   G   S++ +SS +G+  A   + Y+A+K  +
Sbjct: 156 DQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGV 215
Query: 178 NQLAKNLACEWAKDNIRTNSVAPWYIRTPFT---------EPLLGNGKFVDEVKSRTPMG 228
             L  +LA E  + NIR NSV P  + T             P L N    D  +  + + 
Sbjct: 216 QGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLT 275
Query: 229 RLG----EPKEVSSLVAFLCMPAASYITGQTVCIDGG 261
            L     EP++VS+ VA+L    A YI G  + +DGG
Sbjct: 276 LLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGG 312

>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255

Iteration: 1
 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 119/251 (47%), Gaps = 10/251 (3%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTETELNECIHHLQMKGLKVTGSV 75
           L+G  ALVTG ++G+G A+ + L+  GA   +H  +R E E  E ++ +Q  G       
Sbjct: 5   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKE-EAEETVYEIQSNGGSAFSIG 63
Query: 76  CDVSSRPQRQTLINTVSSLFNG-----KLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNF 130
            ++ S    + L +++ +         K +I +NN G        E   + F   +S N 
Sbjct: 64  ANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRXVSVNA 123
Query: 131 ESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAK 190
           ++ F + Q A   LR +  + I+ +SSA   +S      YS TKGA+N     LA +   
Sbjct: 124 KAPFFIIQQALSRLRDN--SRIINISSAATRISLPDFIAYSXTKGAINTXTFTLAKQLGA 181
Query: 191 DNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY 250
             I  N++ P +++T     LL +        + +   RLGE ++++   AFL  P + +
Sbjct: 182 RGITVNAILPGFVKTDXNAELLSDPXXKQYATTISAFNRLGEVEDIADTAAFLASPDSRW 241
Query: 251 ITGQTVCIDGG 261
           +TGQ + + GG
Sbjct: 242 VTGQLIDVSGG 252

>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254

Iteration: 1
 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 114/258 (44%), Gaps = 27/258 (10%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATV-------HTCSRTETELNECIHHLQMKGL 69
            L G T ++TGG +GLG     +    GA V          + T  EL +   +  +   
Sbjct: 2   DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHL--- 58
Query: 70  KVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTN 129
                  DV+     Q ++      F G ++  VNN G S        + E F  V+  N
Sbjct: 59  -------DVTIEEDWQRVVAYAREEF-GSVDGLVNNAGISTGMFLETESVERFRKVVEIN 110
Query: 130 FESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWA 189
               F   +   P ++ +G  SIV +SSA G++   + + Y A+K  +  L+K  A E  
Sbjct: 111 LTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELG 170
Query: 190 KDNIRTNSVAPWYIRTPFTEPL---LGNGKFVDEVKSRTPMGRLG-EPKEVSSLVAFLCM 245
            D IR NSV P    TP T       G G + +     TPMGR+G EP E++  V  L  
Sbjct: 171 TDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPN-----TPMGRVGNEPGEIAGAVVKLLS 225
Query: 246 PAASYITGQTVCIDGGFT 263
             +SY+TG  + +DGG+T
Sbjct: 226 DTSSYVTGAELAVDGGWT 243

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 112/245 (45%), Gaps = 8/245 (3%)
Query: 24  LVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQ 83
           +VTGG  G+G A  E  +  GA V      E   +  +      G K  G   DVSS   
Sbjct: 31  IVTGGGSGIGRATAELFAKNGAYVVVADVNE---DAAVRVANEIGSKAFGVRVDVSSAKD 87
Query: 84  RQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPL 143
            ++ +   ++ + G++++ VNN G       +    E +  + S N +  F   +   P+
Sbjct: 88  AESXVEKTTAKW-GRVDVLVNNAGFGTTGNVVTIPEETWDRIXSVNVKGIFLCSKYVIPV 146
Query: 144 LRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYI 203
            R +G  SI+  +S     +    T Y A+KGA++ L +  A + AK+ IR N+VAP  I
Sbjct: 147 XRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAXAXDHAKEGIRVNAVAPGTI 206
Query: 204 RTPFTEPLLGNGKFVDEVKS----RTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCID 259
            +P+   +    K   +++S    R    R G  +E++    FL    + + TG  + +D
Sbjct: 207 DSPYFTKIFAEAKDPAKLRSDFNARAVXDRXGTAEEIAEAXLFLASDRSRFATGSILTVD 266
Query: 260 GGFTV 264
           GG ++
Sbjct: 267 GGSSI 271

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 119/254 (46%), Gaps = 16/254 (6%)
Query: 23  ALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGL---KVTGSVCDVS 79
           A++TG + G+G A     +  GA V    R    L E    +   G+    V   V DV+
Sbjct: 9   AIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVT 68
Query: 80  SRPQRQTLINTVSSLFNGKLNIFVNNVGTSV----LKPTLEYNAEDFSLVMSTNFESAFH 135
           +   +  +++T    F GKL+I VNN G ++     K     + E +   ++ N  S   
Sbjct: 69  TDAGQDEILSTTLGKF-GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIA 127
Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRT 195
           L + A P L ++    + + S A G+ +      YS  K A++Q  +N A +  +  IR 
Sbjct: 128 LTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRV 187
Query: 196 NSVAPWYIRTPFTE----PLLGNGKF---VDEVKSRTPMGRLGEPKEVSSLVAFLC-MPA 247
           NS++P  + T F      P   + KF   +  +K   P G +G+P++++ ++AFL     
Sbjct: 188 NSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFLADRKT 247
Query: 248 ASYITGQTVCIDGG 261
           +SYI G  + +DGG
Sbjct: 248 SSYIIGHQLVVDGG 261

>pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 91.7 bits (226), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 113/250 (45%), Gaps = 12/250 (4%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L G  ALV+GG +G G + V      GA V      + E       L      V     D
Sbjct: 5   LTGKVALVSGGARGXGASHVRAXVAEGAKVVFGDILDEEGKAXAAELADAARYVH---LD 61
Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           V+   Q +  ++T  + F G L++ VNN G   +    +Y   ++  ++  N    F   
Sbjct: 62  VTQPAQWKAAVDTAVTAFGG-LHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGI 120
Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNS 197
           +      + +G  SI+ +SS  G+        Y+ATK A+  L K+ A E     IR NS
Sbjct: 121 RAVVKPXKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNS 180
Query: 198 VAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVC 257
           + P  ++TP T+       +V E   +T +GR  EP EVS+LV +L    +SY TG    
Sbjct: 181 IHPGLVKTPXTD-------WVPEDIFQTALGRAAEPVEVSNLVVYLASDESSYSTGAEFV 233
Query: 258 IDGGFTVNGF 267
           +DGG TV G 
Sbjct: 234 VDGG-TVAGL 242

>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277

Iteration: 1
 Score = 91.7 bits (226), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 112/263 (42%), Gaps = 13/263 (4%)
Query: 6   QTESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQ 65
           QT+     N   L G  A+VTG   G+GLAV   L+  G  V          +     + 
Sbjct: 15  QTQGPGSMNHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI- 73
Query: 66  MKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLV 125
             G        DVS   Q   +++   + F G ++  V N G   L   ++   EDF  V
Sbjct: 74  --GCGAAACRVDVSDEQQIIAMVDACVAAFGG-VDKLVANAGVVHLASLIDTTVEDFDRV 130
Query: 126 MSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLA 185
           ++ N   A+   + A P +   G  +IV +SS  G V+      Y  +K  + QL++  A
Sbjct: 131 IAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITA 190
Query: 186 CEWAKDNIRTNSVAPWYIRTPFT-------EPLLGNGKFVDEVKSRTPMGRLGEPKEVSS 238
            E     IR+N++ P ++ TP         +  LG G     +      GR+  P+E++ 
Sbjct: 191 AELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARL--QGRMAAPEEMAG 248
Query: 239 LVAFLCMPAASYITGQTVCIDGG 261
           +V FL    AS ITG T   DGG
Sbjct: 249 IVVFLLSDDASMITGTTQIADGG 271

>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281

Iteration: 1
 Score = 91.7 bits (226), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 123/263 (46%), Gaps = 31/263 (11%)
Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCS-------RTETELNECIHHLQMKGLKVTGS 74
           TA++TG T G+GLA+   L+  GA +           RT T+        ++ GL  +G+
Sbjct: 27  TAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTD--------EVAGLS-SGT 77
Query: 75  V----CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNF 130
           V     D +   +       V+  F G  +I VNN G   ++   ++  E +  +++ N 
Sbjct: 78  VLHHPADXTKPSEIADXXAXVADRFGGA-DILVNNAGVQFVEKIEDFPVEQWDRIIAVNL 136
Query: 131 ESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAK 190
            S+FH  + A P  +  G   I+ ++SA G+V++   + Y A K  +  L K +A E A+
Sbjct: 137 SSSFHTIRGAIPPXKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIXGLTKTVALEVAE 196
Query: 191 DNIRTNSVAPWYIRTPFTE---PLLGNGKFVDEVKSRTPMGRLGEP-------KEVSSLV 240
             +  NS+ P Y+ TP  E   P     + + E +    +   G+P       ++V+SL 
Sbjct: 197 SGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVXLKGQPTKKFITVEQVASLA 256
Query: 241 AFLCMPAASYITGQTVCIDGGFT 263
            +L    A+ ITG  V  DGG+T
Sbjct: 257 LYLAGDDAAQITGTHVSXDGGWT 279

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score = 89.7 bits (221), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 113/262 (43%), Gaps = 21/262 (8%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           SL+G  AL+TG   G G  + +  +  GA V    R +         +    L V     
Sbjct: 6   SLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVA---A 62
Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEY-NAEDFSLVMSTNFESAFH 135
           D+S        +    S F GK++I VNN G        E    E+F  ++  N    + 
Sbjct: 63  DISKEADVDAAVEAALSKF-GKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYL 121
Query: 136 LCQLAHPLLRASGAAS---IVL--MSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAK 190
           +     P  + +GA     ++L   S+  G    N+   Y+ATKG +  + K LA E A 
Sbjct: 122 MTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNL-AWYNATKGWVVSVTKALAIELAP 180
Query: 191 DNIRTNSVAPWYIRTPFTEPLLGNG------KFVDEVKSRTPMGRLGEPKEVSSLVAFLC 244
             IR  ++ P    TP     +G        KF D +    PMGRL +P +++   AFLC
Sbjct: 181 AKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSI----PMGRLLKPDDLAEAAAFLC 236
Query: 245 MPAASYITGQTVCIDGGFTVNG 266
            P AS ITG  + +DGG ++ G
Sbjct: 237 SPQASMITGVALDVDGGRSIGG 258

>pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8 Length = 245

Iteration: 1
 Score = 89.7 bits (221), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 116/249 (46%), Gaps = 11/249 (4%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L+    L+TG   G+G A +E  +  GA +  C   E  L E    +      V   V D
Sbjct: 3   LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAH--PVVXDVAD 60
Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
            +S    +     ++ L  G+L+  V+  G +      +   ED+ LV+  N   +F + 
Sbjct: 61  PAS--VERGFAEALAHL--GRLDGVVHYAGITRDNFHWKXPLEDWELVLRVNLTGSFLVA 116
Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEWAKDNIRTN 196
           + A    R     SIVL +S   +   N+G   Y+A+   +  L + LA E  +  IR N
Sbjct: 117 KAASEAXREKNPGSIVLTASR--VYLGNLGQANYAASXAGVVGLTRTLALELGRWGIRVN 174
Query: 197 SVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTV 256
           ++AP +I T  T  +    K  ++  + TP+GR G+P EV+    FL    +S+ITGQ +
Sbjct: 175 TLAPGFIETRXTAKV--PEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQVL 232
Query: 257 CIDGGFTVN 265
            +DGG T+ 
Sbjct: 233 FVDGGRTIG 241

>pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein From Sinorhizobium Meliloti 1021 In Complex With Nadp Length = 255

Iteration: 1
 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 110/249 (44%), Gaps = 13/249 (5%)
Query: 19  QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDV 78
           QG  A+V GGT G GLA V  L   GA V    R E+ +         +   +   + D+
Sbjct: 7   QGKKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADL 66
Query: 79  SSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQ 138
           +       ++   +    G +++   N G S L+P  + +   +    + N + AF   Q
Sbjct: 67  N----EIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQ 122
Query: 139 LAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSV 198
              PL+R  G  SIV  SS          +VYSA+K A+   A  LA E     IR NSV
Sbjct: 123 RLTPLIREGG--SIVFTSSVADEGGHPGXSVYSASKAALVSFASVLAAELLPRGIRVNSV 180
Query: 199 APWYIRTPFTEPLLG-----NGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG 253
           +P +I TP T+ + G       +F     + TP  R G   EV+  V FL    A++ TG
Sbjct: 181 SPGFIDTP-TKGVAGITEAERAEFKTLGDNITPXKRNGTADEVARAVLFLAFE-ATFTTG 238
Query: 254 QTVCIDGGF 262
             + +DGG 
Sbjct: 239 AKLAVDGGL 247

>pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 254

Iteration: 1
 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 110/249 (44%), Gaps = 13/249 (5%)
Query: 19  QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDV 78
           QG  A+V GGT G GLA V  L   GA V    R E+ +         +   +   + D+
Sbjct: 6   QGKKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADL 65
Query: 79  SSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQ 138
           +       ++   +    G +++   N G S L+P  + +   +    + N + AF   Q
Sbjct: 66  N----EIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQ 121
Query: 139 LAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSV 198
              PL+R  G  SIV  SS          +VYSA+K A+   A  LA E     IR NSV
Sbjct: 122 RLTPLIREGG--SIVFTSSVADEGGHPGXSVYSASKAALVSFASVLAAELLPRGIRVNSV 179
Query: 199 APWYIRTPFTEPLLG-----NGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG 253
           +P +I TP T+ + G       +F     + TP  R G   EV+  V FL    A++ TG
Sbjct: 180 SPGFIDTP-TKGVAGITEAERAEFKTLGDNITPXKRNGTADEVARAVLFLAFE-ATFTTG 237
Query: 254 QTVCIDGGF 262
             + +DGG 
Sbjct: 238 AKLAVDGGL 246

>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258

Iteration: 1
 Score = 88.6 bits (218), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 114/260 (43%), Gaps = 23/260 (8%)
Query: 23  ALVTGGTKGLGLAVVEELSMLGATVHTCS--RTETELNECIHHLQMKGLKVTGSVCDVSS 80
           A+VTGG +G+G  + E+L+  G  +      + E +  E I  ++    K      DV+ 
Sbjct: 5   AMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTD 64
Query: 81  RPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLA 140
           +    + I+  +    G  ++ VNN G + +KP LE   ED   + S N  S F   Q A
Sbjct: 65  KANFDSAIDEAAEKLGG-FDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAA 123
Query: 141 HPLLRASG------AASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIR 194
                  G       A+ +       I+SA     YS TK A+  L +  A E A     
Sbjct: 124 SRKFDELGVKGKIINAASIAAIQGFPILSA-----YSTTKFAVRGLTQAAAQELAPKGHT 178
Query: 195 TNSVAPWYIRTPFTEPLLG-----NGKFV----DEVKSRTPMGRLGEPKEVSSLVAFLCM 245
            N+ AP  + T   E +       NGK +     E  S   +GR   P++V+ LV+FL  
Sbjct: 179 VNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFLAS 238
Query: 246 PAASYITGQTVCIDGGFTVN 265
             ++Y+TGQ + +DGG   N
Sbjct: 239 ENSNYVTGQVMLVDGGMLYN 258

>pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265

Iteration: 1
 Score = 88.6 bits (218), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 114/260 (43%), Gaps = 13/260 (5%)
Query: 16  WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK--GLKVTG 73
           + L    A+VTGG+ G+GLA VE L   GA V  C+R    L      L+ +  G ++  
Sbjct: 4   YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFA 63
Query: 74  SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESA 133
           SVCDV    Q +           G  +I VNN G   +    E   E +S  +   F S 
Sbjct: 64  SVCDVLDALQVRAFAEACERTL-GCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSV 122
Query: 134 FHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNI 193
            H  +   P L +   A+IV ++S L           SA +  +  L +++A E+A   +
Sbjct: 123 IHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFAPKGV 182
Query: 194 RTNSVAPWYIRT--------PFTEPLLGNGKFVDEV--KSRTPMGRLGEPKEVSSLVAFL 243
           R N +    + +           E  L   ++  ++    + P+GRLG+P E +  + FL
Sbjct: 183 RVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAILFL 242
Query: 244 CMPAASYITGQTVCIDGGFT 263
             P ++Y TG  + + GG +
Sbjct: 243 ASPLSAYTTGSHIDVSGGLS 262

>pdb|3UXY|A Chain A, The Crystal Structure Of Short Chain Dehydrogenase From Rhodobacter Sphaeroides Length = 266

Iteration: 1
 Score = 88.2 bits (217), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 87/173 (50%), Gaps = 5/173 (2%)
Query: 97  GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMS 156
           G+L+I VNN G        E    D+SL +  N E+ F +C+ A PL  A+G  +IV ++
Sbjct: 93  GRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLXAAAGGGAIVNVA 152
Query: 157 SALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTP-----FTEPL 211
           S  G+       +Y  TK A+  L +    + A   IR N+V P  + TP     F +  
Sbjct: 153 SCWGLRPGPGHALYCLTKAALASLTQCXGXDHAPQGIRINAVCPNEVNTPXLRTGFAKRG 212
Query: 212 LGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTV 264
               + V E+    P+GR+ EP++++ +V FL   AA Y+ G  V ++GG  V
Sbjct: 213 FDPDRAVAELGRTVPLGRIAEPEDIADVVLFLASDAARYLCGSLVEVNGGKAV 265

>pdb|1W6U|A Chain A, Structure Of Human Decr Ternary Complex Length = 302

Iteration: 1
 Score = 87.8 bits (216), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 117/254 (46%), Gaps = 10/254 (3%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK-GLKVTGSV 75
           S QG  A +TGG  GLG  +   LS LGA     SR    L      +  + G KV    
Sbjct: 23  SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQ 82
Query: 76  CDVSSRPQRQTLINTVSSLFN--GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFE-S 132
           CDV      Q   NTVS L    G  NI +NN   + + PT   +   +  +       +
Sbjct: 83  CDVRDPDMVQ---NTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGT 139
Query: 133 AFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDN 192
           AF   ++   L++A   A+ + +++      +      ++ K  +  ++K+LA EW K  
Sbjct: 140 AFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYG 199
Query: 193 IRTNSVAPWYIRTP--FTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY 250
           +R N + P  I+T   F+  L   G F  E+  R P GRLG  +E+++L AFLC   AS+
Sbjct: 200 MRFNVIQPGPIKTKGAFSR-LDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASW 258
Query: 251 ITGQTVCIDGGFTV 264
           I G  +  DGG  V
Sbjct: 259 INGAVIKFDGGEEV 272

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 87.8 bits (216), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 112/245 (45%), Gaps = 13/245 (5%)
Query: 23  ALVTGGTKGLGLAVVEELSMLGATV-HTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
           A+VTG ++G+G A+   L+  G TV    +       E    ++  G K   +  DVS  
Sbjct: 30  AIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDP 89
Query: 82  PQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAH 141
              + L  T    F G +++ VNN G   L    E     F  V++ N +  F+  + A 
Sbjct: 90  AAVRRLFATAEEAFGG-VDVLVNNAGIXPLTTIAETGDAVFDRVIAVNLKGTFNTLREAA 148
Query: 142 PLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPW 201
             LR  G   I   +S +G++  + G +Y+A K  +      L+ E    +I  N+VAP 
Sbjct: 149 QRLRVGGRI-INXSTSQVGLLHPSYG-IYAAAKAGVEAXTHVLSKELRGRDITVNAVAPG 206
Query: 202 YIRTPFTEPLLGNGKFVDEVKSR----TPMGRLGEPKEVSSLVAFLCMPAASYITGQTVC 257
               P    L   GK  DEV+ R     P+ RLG P++++  VAFL  P  +++ GQ + 
Sbjct: 207 ----PTATDLFLEGK-SDEVRDRFAKLAPLERLGTPQDIAGAVAFLAGPDGAWVNGQVLR 261
Query: 258 IDGGF 262
            +GG 
Sbjct: 262 ANGGI 266

>pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 87.4 bits (215), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 115/258 (44%), Gaps = 10/258 (3%)
Query: 4   PQQTESHSRQNRWSLQGMTALVTGGT-KGLGLAVVEELSMLGATVHTCSRTETELNECIH 62
           P++ + H       L+G   LVT     G+G        + GA V      E  L E   
Sbjct: 11  PKEIDGHGL-----LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRD 65
Query: 63  HLQMKGL-KVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAED 121
            L   GL +V   VCDV+S      LI T +    G+L++ VNN G     P ++   E+
Sbjct: 66  QLADLGLGRVEAVVCDVTSTEAVDALI-TQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEE 124
Query: 122 FSLVMSTNFESAFHLCQLAHPLLRASGAASIVLM-SSALGIVSANVGTVYSATKGAMNQL 180
           +  V++    S     + A    R      +++  +S LG  + +  + Y+A K  +  L
Sbjct: 125 WDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMAL 184
Query: 181 AKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLV 240
            +  A E  +  +R N+V+P   R  F E    + + +D + S    GR  EP EV++ +
Sbjct: 185 TRCSAIEAVEFGVRINAVSPSIARHKFLEKT-SSSELLDRLASDEAFGRAAEPWEVAATI 243
Query: 241 AFLCMPAASYITGQTVCI 258
           AFL    +SY+TG+ V +
Sbjct: 244 AFLASDYSSYMTGEVVSV 261

>pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273

Iteration: 1
 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 113/250 (45%), Gaps = 13/250 (5%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L    A++TG T G+GLA  +     GA V    R +  L+  I  +   G    G   D
Sbjct: 27  LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---GGGAVGIQAD 83
Query: 78  VSSRPQRQTLINTVSSLFNGKLNI-FVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
            ++  +   L   V +   G++++ FVN  G S L P  E   E +      N +     
Sbjct: 84  SANLAELDRLYEKVKAE-AGRIDVLFVNAGGGSXL-PLGEVTEEQYDDTFDRNVKGVLFT 141
Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTN 196
            Q A PLL A G+ S+VL  S  G       +VY+A+K A+   A+N   +     IR N
Sbjct: 142 VQKALPLL-ARGS-SVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKDRGIRIN 199
Query: 197 SVAPWYIRTPFTEPLLGNGK-----FVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI 251
           +++P    T     L G         ++ + ++ P GR+G  +EV++   FL    +S++
Sbjct: 200 TLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPXGRVGRAEEVAAAALFLASDDSSFV 259
Query: 252 TGQTVCIDGG 261
           TG  + +DGG
Sbjct: 260 TGAELFVDGG 269

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 120/256 (46%), Gaps = 18/256 (7%)
Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGL---KVTGSVCDV 78
           T ++TG + G+G       +  GA V    R+   L E    +   G+   +V   V DV
Sbjct: 8   TVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADV 67
Query: 79  SSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKP----TLEYNAEDFSLVMSTNFESAF 134
           ++   +  +IN+    F GK+++ VNN G ++         +   + +   +  N ++  
Sbjct: 68  TTEDGQDQIINSTLKQF-GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVI 126
Query: 135 HLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSA-TKGAMNQLAKNLACEWAKDNI 193
            + +   P L AS    IV +SS +    A    +Y A  K A++Q  ++ A + AK  I
Sbjct: 127 EMTKKVKPHLVAS-KGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGI 185
Query: 194 RTNSVAPWYIRTPFTE----PLLGNGKFVDEVKSRT---PMGRLGEPKEVSSLVAFLCMP 246
           R NSV+P  + T FT     P   + KF + + S     P+G  G+P+ +++++ FL   
Sbjct: 186 RVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFLADR 245
Query: 247 AAS-YITGQTVCIDGG 261
             S YI GQ++  DGG
Sbjct: 246 NLSFYILGQSIVADGG 261

>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 111/253 (43%), Gaps = 19/253 (7%)
Query: 23  ALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRP 82
           AL+TG   G+G A    L+  G TV    RT TE+ E    +   G +      DVS   
Sbjct: 31  ALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDEL 90
Query: 83  QRQTLINTVSSLFNGKLNIFVNNVGTS-VLKPTLEYNAEDFSLVMSTNFESAFHLCQLAH 141
           Q +  +  +   F G L+I V N G + V  P  +    ++   ++ N    F    L  
Sbjct: 91  QXRNAVRDLVLKF-GHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTV 149
Query: 142 PLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLA--KNLACEWAKDNIRTNSVA 199
           P L+  G  +IV++SS  G  +       + T     Q+A  + LA E  K +IR N+V 
Sbjct: 150 PYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVC 209
Query: 200 PWYIRTPFTEPLLGNGKFVDEVKSRTPM-----------GRLGEPKEVSSLVAFLCMPAA 248
           P  I T  ++    N K   E ++  P+           G+ G  ++V+ L+ FL    A
Sbjct: 210 PGAIETNISD----NTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVSERA 265
Query: 249 SYITGQTVCIDGG 261
            ++TG  V IDGG
Sbjct: 266 RHVTGSPVWIDGG 278

>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 119/260 (45%), Gaps = 24/260 (9%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
            L+    +VTG + G+G A+ E     G+ V         ++  IH       K     C
Sbjct: 5   DLRDKVVIVTGASMGIGRAIAERFVDEGSKV---------IDLSIH--DPGEAKYDHIEC 53
Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           DV++  Q +  I+ +   + G +++ VNN G          +  ++  ++  N    ++ 
Sbjct: 54  DVTNPDQVKASIDHIFKEY-GSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYA 112
Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTN 196
            + A P +  S   SIV +SS    +     + Y  +K A+  L K++A ++A   +R N
Sbjct: 113 SKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAP-LLRCN 171
Query: 197 SVAPWYIRTPF----------TEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP 246
           +V P  I TP           ++P+    K + E     PM R+G+P+EV+S VAFL   
Sbjct: 172 AVCPATIDTPLVRKAAELEVGSDPMRIEKK-ISEWGHEHPMQRIGKPQEVASAVAFLASR 230
Query: 247 AASYITGQTVCIDGGFTVNG 266
            AS+ITG  + +DGG ++  
Sbjct: 231 EASFITGTCLYVDGGLSIRA 250

>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 119/260 (45%), Gaps = 24/260 (9%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
            L+    +VTG + G+G A+ E     G+ V         ++  IH       K     C
Sbjct: 12  DLRDKVVIVTGASMGIGRAIAERFVDEGSKV---------IDLSIH--DPGEAKYDHIEC 60
Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           DV++  Q +  I+ +   + G +++ VNN G          +  ++  ++  N    ++ 
Sbjct: 61  DVTNPDQVKASIDHIFKEY-GSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYA 119
Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTN 196
            + A P +  S   SIV +SS    +     + Y  +K A+  L K++A ++A   +R N
Sbjct: 120 SKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAP-LLRCN 178
Query: 197 SVAPWYIRTPF----------TEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP 246
           +V P  I TP           ++P+    K + E     PM R+G+P+EV+S VAFL   
Sbjct: 179 AVCPATIDTPLVRKAAELEVGSDPMRIEKK-ISEWGHEHPMQRIGKPQEVASAVAFLASR 237
Query: 247 AASYITGQTVCIDGGFTVNG 266
            AS+ITG  + +DGG ++  
Sbjct: 238 EASFITGTCLYVDGGLSIRA 257

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 113/259 (43%), Gaps = 24/259 (9%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L G TAL+TG  +G+G A  E     GA V        ++N  +   +    ++  + C 
Sbjct: 3   LDGKTALITGSARGIGRAFAEAYVREGARVAIA-----DIN--LEAARATAAEIGPAACA 55
Query: 78  VSSRPQRQTLINT-VSSLFN--GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAF 134
           ++     Q  I+  V+ L +  G ++I VNN     L P +E   E +  + + N     
Sbjct: 56  IALDVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTL 115
Query: 135 HLCQ-LAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNI 193
            + Q +A  ++       I+ M+S  G     +  VY ATK A+  L ++      +  I
Sbjct: 116 FMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGI 175
Query: 194 RTNSVAPWYIRTPFTEPLLGNGKFVD-----------EVKSRTPMGRLGEPKEVSSLVAF 242
             N++AP  +     + +  + KF D           +V +  P GR+G  ++++ +  F
Sbjct: 176 NVNAIAPGVVDGEHWDGV--DAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIF 233
Query: 243 LCMPAASYITGQTVCIDGG 261
           L  P A YI  QT  +DGG
Sbjct: 234 LATPEADYIVAQTYNVDGG 252

>pdb|4IIU|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Escherichia Coli Strain Cft073 Complexed With Nadp+ At 2.1 A Resolution Length = 267

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 117/245 (47%), Gaps = 10/245 (4%)
Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHT-CSRTETELNECIHHLQMKGLKVTGSVCDVSS 80
           + LVTG +KG+G A+  +L+  G  +     R      E ++ +   G        DV++
Sbjct: 28  SVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVAN 87
Query: 81  RPQ-RQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQ- 138
           R Q R+ L + ++   +G     V+N G +        + +D+  V+ TN +S +++ Q 
Sbjct: 88  REQCREVLEHEIAQ--HGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQP 145
Query: 139 LAHPLLRASGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEWAKDNIRTNS 197
              P++ A     I+ +SS  G++  N G V YSA K  +    K LA E AK  I  N 
Sbjct: 146 CIMPMIGARQGGRIITLSSVSGVM-GNRGQVNYSAAKAGIIGATKALAIELAKRKITVNC 204
Query: 198 VAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVC 257
           +AP  I T   E        + E  S  PM R+G+ +EV+ L ++L    A Y+T Q + 
Sbjct: 205 IAPGLIDTGMIEM---EESALKEAMSMIPMKRMGQAEEVAGLASYLMSDIAGYVTRQVIS 261
Query: 258 IDGGF 262
           I+GG 
Sbjct: 262 INGGM 266

>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283

Iteration: 1
 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 118/263 (44%), Gaps = 26/263 (9%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           SL+G  ALVTG  +G+G  +  EL   G  V       TE  E +    +  +K  GS  
Sbjct: 26  SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEV----VAAIKKNGS-- 79
Query: 77  DVSSRPQRQTLINTVSSLFN------GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNF 130
           D +       ++  +  +F       GKL+I  +N G        +   E+F  V + N 
Sbjct: 80  DAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINT 139
Query: 131 ESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA-NVGTVYSATKGAMNQLAKNLACEWA 189
              F + + A+  L   G   ++LM S  G   A     VYS +KGA+   A+ +A + A
Sbjct: 140 RGQFFVAREAYKHLEIGG--RLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMA 197
Query: 190 KDNIRTNSVAPWYIRTPFTEPL----LGNGK-----FVDEVKSR--TPMGRLGEPKEVSS 238
              I  N VAP  I+T     +    + NG+      VDE  +   +P+ R+G P +++ 
Sbjct: 198 DKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIAR 257
Query: 239 LVAFLCMPAASYITGQTVCIDGG 261
           +V FL      ++TG+ + IDGG
Sbjct: 258 VVCFLASNDGGWVTGKVIGIDGG 280

>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283

Iteration: 1
 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 118/263 (44%), Gaps = 26/263 (9%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           SL+G  ALVTG  +G+G  +  EL   G  V       TE  E +    +  +K  GS  
Sbjct: 26  SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEV----VAAIKKNGS-- 79
Query: 77  DVSSRPQRQTLINTVSSLFN------GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNF 130
           D +       ++  +  +F       GKL+I  +N G        +   E+F  V + N 
Sbjct: 80  DAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINT 139
Query: 131 ESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA-NVGTVYSATKGAMNQLAKNLACEWA 189
              F + + A+  L   G   ++LM S  G   A     VYS +KGA+   A+ +A + A
Sbjct: 140 RGQFFVAREAYKHLEIGG--RLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMA 197
Query: 190 KDNIRTNSVAPWYIRTPFTEPL----LGNGK-----FVDEVKSR--TPMGRLGEPKEVSS 238
              I  N VAP  I+T     +    + NG+      VDE  +   +P+ R+G P +++ 
Sbjct: 198 DKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIAR 257
Query: 239 LVAFLCMPAASYITGQTVCIDGG 261
           +V FL      ++TG+ + IDGG
Sbjct: 258 VVCFLASNDGGWVTGKVIGIDGG 280

>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus Thuringiensis Length = 264

Iteration: 1
 Score = 85.1 bits (209), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 115/260 (44%), Gaps = 34/260 (13%)
Query: 23  ALVTGGTKGLGLAVVEELSMLGATV-----------HTCSRTETELNECIHHLQMKGLKV 71
           AL+T GTKGLG  V E+L   G +V            T   T  ++ E +  +Q      
Sbjct: 10  ALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQ------ 63
Query: 72  TGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVL--KPTLEYNAEDFSLVMSTN 129
                DV+ +     ++    S F GK++  +NN G  V   K  ++Y  ++++ ++  N
Sbjct: 64  ----ADVTKKEDLHKIVEEAMSHF-GKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGN 118
Query: 130 FESAFHLCQLAHPLLRASGAASIVLM-----SSALGIVSANVGTVYSATKGAMNQLAKNL 184
             + FHL +L  P++R      I+        SA G +     + ++A K  +  L K +
Sbjct: 119 LTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYR---SAFAAAKVGLVSLTKTV 175
Query: 185 ACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLC 244
           A E A+  I  N V P  I     E  +   + + E    TP+GR G  ++++  ++FLC
Sbjct: 176 AYEEAEYGITANMVCPGDIIGEMKEATIQEARQLKE--HNTPIGRSGTGEDIARTISFLC 233
Query: 245 MPAASYITGQTVCIDGGFTV 264
              +  ITG  + + G   V
Sbjct: 234 EDDSDMITGTIIEVTGAVDV 253

>pdb|1W73|A Chain A, Binary Structure Of Human Decr Solved By Semet Sad. Length = 302

Iteration: 1
 Score = 84.7 bits (208), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 113/254 (44%), Gaps = 10/254 (3%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK-GLKVTGSV 75
           S QG  A +TGG  GLG      LS LGA     SR    L      +  + G KV    
Sbjct: 23  SFQGKVAFITGGGTGLGKGXTTLLSSLGAQCVIASRKXDVLKATAEQISSQTGNKVHAIQ 82
Query: 76  CDVSSRPQRQTLINTVSSLFN--GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFE-S 132
           CDV      Q   NTVS L    G  NI +NN   + + PT   +   +  +       +
Sbjct: 83  CDVRDPDXVQ---NTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGT 139
Query: 133 AFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDN 192
           AF   ++   L++A   A+ + +++      +      ++ K  +   +K+LA EW K  
Sbjct: 140 AFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAXSKSLAAEWGKYG 199
Query: 193 IRTNSVAPWYIRTP--FTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY 250
            R N + P  I+T   F+  L   G F  E   R P GRLG  +E+++L AFLC   AS+
Sbjct: 200 XRFNVIQPGPIKTKGAFSR-LDPTGTFEKEXIGRIPCGRLGTVEELANLAAFLCSDYASW 258
Query: 251 ITGQTVCIDGGFTV 264
           I G  +  DGG  V
Sbjct: 259 INGAVIKFDGGEEV 272

>pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 260

Iteration: 1
 Score = 84.7 bits (208), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 117/247 (47%), Gaps = 23/247 (9%)
Query: 19  QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRT-ETELNECIHHLQMKGLKVTGSVCD 77
           Q    ++TG ++G+G  +V         V   SR+ +   +  IH        V G +  
Sbjct: 27  QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADPDIH-------TVAGDI-- 77
Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
             S+P+    I        G+++  VNN G  + KP +E   ED+   +  N    FH+ 
Sbjct: 78  --SKPETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEXTQEDYDHNLGVNVAGFFHIT 135
Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVG---TVYSATKGAMNQLAKNLACEWAKDNIR 194
           Q A       G+  IV ++++L +    VG    + S TKG +N + ++LA E+++  +R
Sbjct: 136 QRAAAEXLKQGSGHIVSITTSL-VDQPXVGXPSALASLTKGGLNAVTRSLAXEFSRSGVR 194
Query: 195 TNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ 254
            N+V+P  I+TP   P     +    +    P+GR GE ++V  + A L +  A +ITG+
Sbjct: 195 VNAVSPGVIKTP-XHP----AETHSTLAGLHPVGRXGEIRDV--VDAVLYLEHAGFITGE 247
Query: 255 TVCIDGG 261
            + +DGG
Sbjct: 248 ILHVDGG 254

>pdb|4E4Y|A Chain A, The Crystal Structure Of A Short Chain Dehydrogenase Family Protein From Francisella Tularensis Subsp. Tularensis Schu S4 Length = 244

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 112/249 (44%), Gaps = 23/249 (9%)
Query: 24  LVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQ 83
           LVTGG+KG+G AVVE L  L    HT    + + +    +L+     +T          +
Sbjct: 8   LVTGGSKGIGKAVVELL--LQNKNHTVINIDIQQSFSAENLKFIKADLT----------K 55
Query: 84  RQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPL 143
           +Q + N +  + N   +    N G  +     + + E    V+  N  S+ +  +     
Sbjct: 56  QQDITNVLDIIKNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENN 115
Query: 144 LRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYI 203
           L+    ASIV   S    ++      Y+ +KGA+ Q  K+LA + AK  IR N+V P  +
Sbjct: 116 LKV--GASIVFNGSDQCFIAKPNSFAYTLSKGAIAQXTKSLALDLAKYQIRVNTVCPGTV 173
Query: 204 RTPFTEPLLGN-----GKFVDEVKSRT----PMGRLGEPKEVSSLVAFLCMPAASYITGQ 254
            T     L+       G   DE + +     P+ R+ +P+E++ LV FL    + + TG 
Sbjct: 174 DTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLSDKSKFXTGG 233
Query: 255 TVCIDGGFT 263
            + IDGG+T
Sbjct: 234 LIPIDGGYT 242

>pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID Dehydrogenase Length = 253

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 110/247 (44%), Gaps = 10/247 (4%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           LQG  ALVTGG  G+GL VV+ L   GA V      E    +    L  + + V     D
Sbjct: 4   LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVR---HD 60
Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           VSS      ++  V     G LN+ VNN G  +         EDFS ++  N ES F  C
Sbjct: 61  VSSEADWTLVMAAVQRRL-GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGC 119
Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQL--AKNLACEWAKDNIRT 195
           Q     ++ +G  SI+ M+S    +       YSA+K A++ L  A  L+C      IR 
Sbjct: 120 QQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRV 178
Query: 196 NSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGE---PKEVSSLVAFLCMPAASYIT 252
           NS+ P  I TP  +  L  G   + V     + R G    P+ ++ LV FL    +S ++
Sbjct: 179 NSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMS 238
Query: 253 GQTVCID 259
           G  +  D
Sbjct: 239 GSELHAD 245

>pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase Length = 278

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 96/194 (49%), Gaps = 7/194 (3%)
Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKP--TLEYNAEDFSLVMSTNFESA 133
           CDV+     + L++T  +  +GKL+I   NVG     P   LE   EDF  VM  N   A
Sbjct: 71  CDVTKDEDVRNLVDTTIAK-HGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGA 129
Query: 134 FHLCQLAHPLLRASGAASIVLMSSALGIVSAN-VGTVYSATKGAMNQLAKNLACEWAKDN 192
           F + + A  ++  +   SIV  +S     +   V  VY+ATK A+  L  +L  E  +  
Sbjct: 130 FLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYG 189
Query: 193 IRTNSVAPWYIRTPFTEPLLG-NGKFVDEVKSRTP--MGRLGEPKEVSSLVAFLCMPAAS 249
           IR N V+P+ + +P    + G +   V+E+  +     G L   ++V+  VA+L    + 
Sbjct: 190 IRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESK 249
Query: 250 YITGQTVCIDGGFT 263
           Y++G  + IDGG+T
Sbjct: 250 YVSGLNLVIDGGYT 263

>pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 113/250 (45%), Gaps = 3/250 (1%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHL-QMKGLKVTGSVC 76
           L G  AL+TG TKG+G  +    +  GA +    R  +EL+     L +  G  V     
Sbjct: 18  LDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAI 77
Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           D++  P     +   ++   G L++ VNN G S  +P ++ + + F   ++ N  +   L
Sbjct: 78  DLA-EPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALL 136
Query: 137 CQLAHPLLRASG-AASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRT 195
                  + A+G   +I+ ++SA  +        Y  +K  +    K LA E     IR 
Sbjct: 137 ASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELGPHGIRA 196
Query: 196 NSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT 255
           NSV P  + T   + + G+      + +R P+GR   P EVS  V +L   AAS I G  
Sbjct: 197 NSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVVWLASDAASMINGVD 256
Query: 256 VCIDGGFTVN 265
           + +DGG+T+ 
Sbjct: 257 IPVDGGYTMG 266

>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 101/256 (39%), Gaps = 17/256 (6%)
Query: 23  ALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRP 82
           ALVTG  +G+G A+   L   G  V      +         +   G        DVS R 
Sbjct: 5   ALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRD 64
Query: 83  QRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHP 142
           Q    +        G  ++ VNN G +   P      E    V + N +      Q A  
Sbjct: 65  QVFAAVEQARKTLGG-FDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVE 123
Query: 143 LLRASG-AASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPW 201
             +  G    I+   S  G V      VYS++K A+  L +  A + A   I  N   P 
Sbjct: 124 AFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPG 183
Query: 202 YIRTPF------------TEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAAS 249
            ++TP              +PL   G    E   R  +GRL EP++V++ V++L  P + 
Sbjct: 184 IVKTPMWAEIDRQVSEAAGKPL---GYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSD 240
Query: 250 YITGQTVCIDGGFTVN 265
           Y+TGQ++ IDGG   N
Sbjct: 241 YMTGQSLLIDGGMVFN 256

>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium Smegmatis Length = 454

Iteration: 1
 Score = 81.3 bits (199), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 116/248 (46%), Gaps = 19/248 (7%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC- 76
           L G  A+VTG  +G+G  + E  +  GATV        +++     L+    KV G+   
Sbjct: 211 LDGKVAVVTGAARGIGATIAEVFARDGATV-----VAIDVDGAAEDLKRVADKVGGTALT 265
Query: 77  -DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
            DV++      +   V+    GK++I VNN G +  K     + + +  V++ N  +   
Sbjct: 266 LDVTADDAVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQR 325
Query: 136 LCQ--LAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNI 193
           L +  + +  +   G   ++ +SS  GI      T Y+ TK  M  LA+ LA   A   I
Sbjct: 326 LTEGLVGNGTIGEGG--RVIGLSSMAGIAGNRGQTNYATTKAGMIGLAEALAPVLADKGI 383
Query: 194 RTNSVAPWYIRTPFTE--PLLGNGKFVDEVKSR-TPMGRLGEPKEVSSLVAFLCMPAASY 250
             N+VAP +I T  TE  PL        EV  R   + + G+P +V+ L+A+   PA++ 
Sbjct: 384 TINAVAPGFIETKMTEAIPLA-----TREVGRRLNSLFQGGQPVDVAELIAYFASPASNA 438
Query: 251 ITGQTVCI 258
           +TG T+ +
Sbjct: 439 VTGNTIRV 446

>pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus Thermophilus Tt0137 Length = 263

Iteration: 1
 Score = 80.9 bits (198), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 116/249 (46%), Gaps = 13/249 (5%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L G T LVTG   G+G A ++  +  GA++    R E         +     +    V D
Sbjct: 4   LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREE---RLLAEAVAALEAEAIAVVAD 60
Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNA--EDFSLVMSTNFESAFH 135
           VS     + +       F G+L+   +  G  V    L +N   E +  V+  N   +F 
Sbjct: 61  VSDPKAVEAVFAEALEEF-GRLHGVAHFAG--VAHSALSWNLPLEAWEKVLRVNLTGSFL 117
Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRT 195
           + + A  +L   G  S+VL  S  G+ +  +   Y+A K  +  LA+ LA E A+  +R 
Sbjct: 118 VARKAGEVLEEGG--SLVLTGSVAGLGAFGLAH-YAAGKLGVVGLARTLALELARKGVRV 174
Query: 196 NSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT 255
           N + P  I+TP T  L     +  EV + +P+GR G P+EV+    FL    ++YITGQ 
Sbjct: 175 NVLLPGLIQTPMTAGLP-PWAWEQEVGA-SPLGRAGRPEEVAQAALFLLSEESAYITGQA 232
Query: 256 VCIDGGFTV 264
           + +DGG ++
Sbjct: 233 LYVDGGRSI 241

>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280

Iteration: 1
 Score = 80.9 bits (198), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 110/266 (41%), Gaps = 22/266 (8%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCS-------------RTETELNECIHH 63
           SLQG  A +TG  +G G +    L+  GA +  C               +  +L+E    
Sbjct: 12  SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARL 71
Query: 64  LQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFS 123
           ++ +G K    V DV      + L+      F G+L++ V N G        E   E + 
Sbjct: 72  VEDQGRKALTRVLDVRDDAALRELVADGMEQF-GRLDVVVANAGVLSWGRVWELTDEQWD 130
Query: 124 LVMSTNFESAFHLCQLAHP-LLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAK 182
            V+  N    +   +   P ++ A    SIV++SS+ G+ +      YSA+K  +  L  
Sbjct: 131 TVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTALTN 190
Query: 183 NLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDE---VKSRTPM----GRLGEPKE 235
            LA E  +  IR NS+ P+ + TP  EP      F      V S  PM           E
Sbjct: 191 TLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPNGFMTADE 250
Query: 236 VSSLVAFLCMPAASYITGQTVCIDGG 261
           V+ +VA+L    +  +TG  + +D G
Sbjct: 251 VADVVAWLAGDGSGTLTGTQIPVDKG 276

>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277

Iteration: 1
 Score = 80.5 bits (197), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 109/252 (43%), Gaps = 15/252 (5%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC- 76
           L+   A +TGG  G+G  + E     G      SR+   +      L       TG  C 
Sbjct: 25  LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLA----GATGRRCL 80
Query: 77  ----DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPT--LEYNAEDFSLVMSTNF 130
               DV + P     ++     F G+++I +N    + L P   L +NA  F  VM  + 
Sbjct: 81  PLSMDVRAPPAVMAAVDQALKEF-GRIDILINCAAGNFLCPAGALSFNA--FKTVMDIDT 137
Query: 131 ESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAK 190
              F++ ++ +          IV +++ LG     +     + K A++ + ++LA EW  
Sbjct: 138 SGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWGP 197
Query: 191 DNIRTNSVAPWYIR-TPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAAS 249
            NIR NS+AP  I  T     L G    +    + +P+ RLG   E++  V +L  P AS
Sbjct: 198 QNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLYLASPLAS 257
Query: 250 YITGQTVCIDGG 261
           Y+TG  +  DGG
Sbjct: 258 YVTGAVLVADGG 269

>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277

Iteration: 1
 Score = 80.5 bits (197), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 121/274 (44%), Gaps = 35/274 (12%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATV---------HTC----SRTETELNECIHHL 64
           L+G  A +TG  +G G A    ++  GA +          +C      +  +L+E +  +
Sbjct: 9   LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLV 68
Query: 65  QMKGLKVTGSVCDVSSRPQ-RQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFS 123
           +    ++  +V D     + R+ + + V++L  G+L+I V N G +  +   +   EDF 
Sbjct: 69  EAANRRIVAAVVDTRDFDRLRKVVDDGVAAL--GRLDIIVANAGVAAPQAWDDITPEDFR 126
Query: 124 LVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIVSANVGTVYSATKGAMNQLAK 182
            VM  N    ++      P +   G   SI+L+SSA G+        Y+A+K A+  LA+
Sbjct: 127 DVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVTGLAR 186
Query: 183 NLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSR-----------TPM--GR 229
             A E  K +IR NSV P  + TP     +G+G  V  V              TP     
Sbjct: 187 AFAAELGKHSIRVNSVHPGPVNTP-----MGSGDMVTAVGQAMETNPQLSHVLTPFLPDW 241
Query: 230 LGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFT 263
           + EP++++  V +L    +  +T   + +D G T
Sbjct: 242 VAEPEDIADTVCWLASDESRKVTAAQIPVDQGST 275

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 101/244 (41%), Gaps = 14/244 (5%)
Query: 24  LVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQ 83
           +VTG   G+G A  E L+  GA V                +   G        DVS    
Sbjct: 13  IVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPES 72
Query: 84  RQTLINTVSSLFNGKLNIFVNNV---GTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLA 140
            + + +   + F G ++  VNN    G   L   L  + E +   MS N + A    +  
Sbjct: 73  AKAMADRTLAEFGG-IDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAV 131
Query: 141 HPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAP 200
           +  +   G  +IV  SS    + +N    Y   K  +N L + L+ E    NIR N++AP
Sbjct: 132 YKKMTKRGGGAIVNQSSTAAWLYSNY---YGLAKVGINGLTQQLSRELGGRNIRINAIAP 188
Query: 201 WYIRTPF---TEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVC 257
             I T     T P     + VD++    P+ R+G P ++  +  FL    AS+ITGQ   
Sbjct: 189 GPIDTEANRTTTPK----EMVDDIVKGLPLSRMGTPDDLVGMCLFLLSDEASWITGQIFN 244
Query: 258 IDGG 261
           +DGG
Sbjct: 245 VDGG 248

>pdb|4IMR|A Chain A, Crystal Structure Of 3-oxoacyl (acyl-carrier-protein) Reductase (target Efi-506442) From Agrobacterium Tumefaciens C58 With Nadp Bound Length = 275

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 113/249 (45%), Gaps = 4/249 (1%)
Query: 16  WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSV 75
           + L+G TALVTG ++G+G A+ E L+  GA V                +   G       
Sbjct: 29  FGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELA 88
Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
            D+S       LI    ++    ++I V N    +          D +  ++ N  S   
Sbjct: 89  GDLSEAGAGTDLIERAEAI--APVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVD 146
Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRT 195
           + Q A P + A     +V + S   +   +V T Y+ATK A + L ++ A ++A DN+  
Sbjct: 147 MLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAATKAAQHNLIQSQARDFAGDNVLL 206
Query: 196 NSVAPWYIRTPF-TEPLLGNGKFVDE-VKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG 253
           N++AP  + T    +    + +  DE V++   MGR G P+E+     FL   A S++TG
Sbjct: 207 NTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMGRAGRPEEMVGAALFLASEACSFMTG 266
Query: 254 QTVCIDGGF 262
           +T+ + GG+
Sbjct: 267 ETIFLTGGY 275

>pdb|3AFM|A Chain A, Crystal Structure Of Aldose Reductase A1-R Responsible For Alginate Metabolism Length = 258

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 117/254 (46%), Gaps = 12/254 (4%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSR-TETELNECIHHLQMKGLKVTGSV 75
            L+G   L+TG ++G+GLA     +  GA V    R     ++E I  ++  G       
Sbjct: 4   DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFA 63
Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSV-LKPTLEYNAEDFSLVMSTNFESAF 134
            D+++    Q L++   + F G +++ +NN G  V  KP  E +   +  VM  N  S  
Sbjct: 64  ADLATSEACQQLVDEFVAKFGG-IDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVV 122
Query: 135 HLCQLAHPLL----RASGAASIVLMSSALG--IVSANVGTVYSATKGAMNQLAKNLACEW 188
              + A P L    +ASG  S V+ + ++           +Y A K  ++ + KN     
Sbjct: 123 MTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNWVDFH 182
Query: 189 AKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVS-SLVAFLCMPA 247
            KD +R N V+P  + T F      + +  D + +  PMGR G  +E++ + + F    A
Sbjct: 183 TKDGVRFNIVSPGTVDTAFHADKTQDVR--DRISNGIPMGRFGTAEEMAPAFLFFASHLA 240
Query: 248 ASYITGQTVCIDGG 261
           + YITGQ + I+GG
Sbjct: 241 SGYITGQVLDINGG 254

>pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain DehydrogenaseREDUCTASE 3 Length = 270

Iteration: 1
 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 95/193 (49%), Gaps = 10/193 (5%)
Query: 75  VCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVG--TSVLKPTLEYNAEDFSLVMSTNFES 132
           +CDV+     +TL++     F G+L+  VNN G      +P  E +A+ F  ++  N   
Sbjct: 60  LCDVTQEDDVKTLVSETIRRF-GRLDCVVNNAGHHPPPQRPE-ETSAQGFRQLLELNLLG 117
Query: 133 AFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDN 192
            + L +LA P LR S   +++ +SS +G +       Y ATKGA+  + K LA + +   
Sbjct: 118 TYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYG 176
Query: 193 IRTNSVAPWYIRTPFTEPLLG----NGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAA 248
           +R N ++P  I TP  E L          + E     P+GR+G+P EV +   FL    A
Sbjct: 177 VRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLAS-EA 235
Query: 249 SYITGQTVCIDGG 261
           ++ TG  + + GG
Sbjct: 236 NFCTGIELLVTGG 248

>pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' Length = 257

Iteration: 1
 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 100/229 (43%), Gaps = 4/229 (1%)
Query: 44  GATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFV 103
           GA V    RT+ +L E    ++    ++     DV +    Q  I  +   F G+++I +
Sbjct: 30  GARVVITGRTKEKLEEAKLEIEQFPGQILTVQXDVRNTDDIQKXIEQIDEKF-GRIDILI 88
Query: 104 NNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVS 163
           NN   + + P  + +   ++ V++      F+  Q         G    ++   A     
Sbjct: 89  NNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINXVATYAWD 148
Query: 164 ANVGTVYSAT-KGAMNQLAKNLACEWA-KDNIRTNSVAPWYI-RTPFTEPLLGNGKFVDE 220
           A  G ++SA  K  +    K LA EW  K  IR N++AP  I RT   + L  + +    
Sbjct: 149 AGPGVIHSAAAKAGVLAXTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEXAKR 208
Query: 221 VKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNGFFF 269
                P+GRLG P+E++ L  +LC   A+YI G     DGG  ++ + F
Sbjct: 209 TIQSVPLGRLGTPEEIAGLAYYLCSDEAAYINGTCXTXDGGQHLHQYPF 257

>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 106/254 (41%), Gaps = 11/254 (4%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L+G  A+VTG + G+G A     +  GA V   +R    L E    +   G +      D
Sbjct: 6   LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGD 65
Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGT-SVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           V      + L+      F G L+   NN G    +      + E +   + TN  SAF  
Sbjct: 66  VGDEALHEALVELAVRRFGG-LDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLA 124
Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEWAKDNIRT 195
            +   P + A G  S+   SS +G  +   G   Y+A+K  +  L + LA E     IR 
Sbjct: 125 AKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGIRV 184
Query: 196 NSVAPWYIRTPFTEPLLGNGK-----FVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY 250
           N++ P    TP     L         FV+ + +   + R+  P+E++    +L    AS+
Sbjct: 185 NALLPGGTDTPANFANLPGAAPETRGFVEGLHA---LKRIARPEEIAEAALYLASDGASF 241
Query: 251 ITGQTVCIDGGFTV 264
           +TG  +  DGG +V
Sbjct: 242 VTGAALLADGGASV 255

>pdb|1BDB|A Chain A, Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From Pseudomonas Sp. Lb400 Length = 277

Iteration: 1
 Score = 78.2 bits (191), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 83/267 (31%), Positives = 115/267 (43%), Gaps = 24/267 (8%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNEC-IHHLQMKGLKVTGSVC 76
           L+G   L+TGG  GLG A+V+     GA V    ++   L E    H    G  V G V 
Sbjct: 3   LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH----GDNVLGIVG 58
Query: 77  DVSS-RPQRQTLINTVSSLFNGKLNIFVNNVG-----TSVLKPTLEYNAEDFSLVMSTNF 130
           DV S   Q+Q     V+    GK++  + N G     T+++    E     F  V   N 
Sbjct: 59  DVRSLEDQKQAASRCVARF--GKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINV 116
Query: 131 ESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAK 190
           +   H  +   P L AS    I  +S+A G      G +Y+A K A+  L + LA E A 
Sbjct: 117 KGYIHAVKACLPALVASRGNVIFTISNA-GFYPNGGGPLYTAAKHAIVGLVRELAFELAP 175
Query: 191 DNIRTNSVAPWYIRTPFTEP-LLGNGK-------FVDEVKSRTPMGRLGEPKEVS-SLVA 241
             +R N V    I +    P  LG G          D +KS  P+GR+ E +E + + V 
Sbjct: 176 -YVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVF 234
Query: 242 FLCMPAASYITGQTVCIDGGFTVNGFF 268
           F     A+  TG  +  DGG  V GFF
Sbjct: 235 FATRGDAAPATGALLNYDGGLGVRGFF 261

>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 77.8 bits (190), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 114/256 (44%), Gaps = 15/256 (5%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           L G  ALVTG  +G+G AV   L  LGA  V   + +  +  + +  ++  G        
Sbjct: 16  LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKA 75
Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           D+   P+   L +   + F G L+I V+N G        +   E+F  V S N    F +
Sbjct: 76  DIRQVPEIVKLFDQAVAHF-GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFV 134
Query: 137 CQLAHPLLRASGAASIVLMSSALG-IVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRT 195
            + A+  L   G   IVL SS      S    ++YS +KGA++   +  + +     I  
Sbjct: 135 AREAYRHLTEGG--RIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCGDKKITV 192
Query: 196 NSVAPWYIRTPF----TEPLLGNG-KFVDEVKSR-----TPMGRLGEPKEVSSLVAFLCM 245
           N+VAP    T      +   + NG  +  E + +     +P+ R G P++V+++V FL  
Sbjct: 193 NAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVGFLVS 252
Query: 246 PAASYITGQTVCIDGG 261
               ++ G+ + +DGG
Sbjct: 253 KEGEWVNGKVLTLDGG 268

>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267

Iteration: 1
 Score = 77.8 bits (190), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 117/269 (43%), Gaps = 28/269 (10%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHL--QMKGLKVTGSV 75
           L+G TALVTG T G+G A+   L   GA V    R E  +NE I  +  Q     +   V
Sbjct: 8   LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVV 67
Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYN--AEDFSLVMSTNFESA 133
            D+ +    Q +I         K++I +NN+G  + +P   ++   ED+  +   N  S 
Sbjct: 68  ADLGTEQGCQDVIEKYP-----KVDILINNLG--IFEPVEYFDIPDEDWFKLFEVNIXSG 120
Query: 134 FHLCQ--LAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKD 191
             L +  L   + R  G   ++ ++S   I  +     YSATK     L+++LA      
Sbjct: 121 VRLTRSYLKKXIERKEG--RVIFIASEAAIXPSQEXAHYSATKTXQLSLSRSLAELTTGT 178
Query: 192 NIRTNSVAPWYIRTPFTEPLL-------------GNGKFVDEVKSRTPMGRLGEPKEVSS 238
           N+  N++ P    T   E  L                +F  E +  + + RL  P+E++ 
Sbjct: 179 NVTVNTIXPGSTLTEGVETXLNSLYPNEQLTIEEAEKRFXKENRPTSIIQRLIRPEEIAH 238
Query: 239 LVAFLCMPAASYITGQTVCIDGGFTVNGF 267
           LV FL  P +S I G  + IDGG   + F
Sbjct: 239 LVTFLSSPLSSAINGSALRIDGGLVRSVF 267

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 77.8 bits (190), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 107/247 (43%), Gaps = 8/247 (3%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L G TALVTG  +G+G A+   L+  GATV                +   G K      D
Sbjct: 4   LAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI---GKKARAIAAD 60
Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           +S     + L   + +L  G ++I VNN          + + + +  ++  N    F + 
Sbjct: 61  ISDPGSVKALFAEIQAL-TGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVT 119
Query: 138 QLAHPLLRASGAAS--IVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRT 195
           +     +RA+G A   I + S+     + N+   Y A KG +    + LA E  K NI  
Sbjct: 120 RAGTDQMRAAGKAGRVISIASNTFFAGTPNM-AAYVAAKGGVIGFTRALATELGKYNITA 178
Query: 196 NSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT 255
           N+V P  I +   +    N  F   V+    M   G+P+ ++ +V+FL    A +ITGQT
Sbjct: 179 NAVTPGLIESDGVKASPHNEAF-GFVEMLQAMKGKGQPEHIADVVSFLASDDARWITGQT 237
Query: 256 VCIDGGF 262
           + +D G 
Sbjct: 238 LNVDAGM 244

>pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE From Mycobacterium Abscessus Bound To Nad Length = 281

Iteration: 1
 Score = 77.4 bits (189), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 110/272 (40%), Gaps = 26/272 (9%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTET------------ELNECIHHL 64
             +G TAL+TGG +G+G +    L+  GA +  C R E             +L E +  +
Sbjct: 7   DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALV 66
Query: 65  QMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSL 124
           +  G +   +  DV  R   ++ +        G ++I + N G S +    E  +  +  
Sbjct: 67  EKTGRRCISAKVDVKDRAALESFVAEAEDTLGG-IDIAITNAGISTIALLPEVESAQWDE 125
Query: 125 VMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNL 184
           V+ TN    F+      P +       IV +SS LG  +      Y ++K  +  L K  
Sbjct: 126 VIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIGLTKCA 185
Query: 185 ACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRT-------------PMGRLG 231
           A +     I  N+VAP  I TP T      G    +++  T                   
Sbjct: 186 AHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPFL 245
Query: 232 EPKEVSSLVAFLCMPAASYITGQTVCIDGGFT 263
           +P+EV+  V FL   A+S+ITG  + ID G T
Sbjct: 246 KPEEVTRAVLFLVDEASSHITGTVLPIDAGAT 277

>pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3- Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-356. Length = 281

Iteration: 1
 Score = 77.4 bits (189), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 77/266 (28%), Positives = 111/266 (41%), Gaps = 22/266 (8%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNEC-IHHLQMKGLKVTGSVC 76
           L G  AL+TGG  GLG A+V+     GA V    ++   L E  + H    G    G V 
Sbjct: 3   LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH----GGNAVGVVG 58
Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAED-----FSLVMSTNFE 131
           DV S   ++       + F GK++  + N G       L    ED     F  +   N +
Sbjct: 59  DVRSLQDQKRAAERCLAAF-GKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVK 117
Query: 132 SAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKD 191
              H  +   P L +S   S+V   S  G      G +Y+ATK A+  L + +A E A  
Sbjct: 118 GYIHAVKACLPALVSS-RGSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELAP- 175
Query: 192 NIRTNSVAPW----YIRTP----FTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFL 243
           ++R N VAP      +R P     +E  + +    D +KS  P+GR+   +E +    F 
Sbjct: 176 HVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYVFF 235
Query: 244 CMPAASY-ITGQTVCIDGGFTVNGFF 268
                S   TG  +  DGG  V GF 
Sbjct: 236 ATRGDSLPATGALLNYDGGMGVRGFL 261

>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/241 (24%), Positives = 107/241 (44%), Gaps = 4/241 (1%)
Query: 23  ALVTGGTKGLGLAVVEELSMLG-ATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
           A VTGG  G+G ++ + L   G   V  C        + +   +  G     S  +V   
Sbjct: 16  AYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDW 75
Query: 82  PQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAH 141
              +   + V +   G++++ VNN G +      +   ED+  V+ TN  S F++ +   
Sbjct: 76  DSTKQAFDKVKAEV-GEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVI 134
Query: 142 PLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPW 201
             +   G   I+ +SS  G       T YS  K  ++    +LA E A   +  N+V+P 
Sbjct: 135 DGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPG 194
Query: 202 YIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGG 261
           YI T   + +  +   ++++ +  P+ RLG P E+ S+VA+L    + + TG    ++GG
Sbjct: 195 YIGTDMVKAIRPD--VLEKIVATIPVRRLGSPDEIGSIVAWLASEESGFSTGADFSLNGG 252
Query: 262 F 262
Sbjct: 253 L 253

>pdb|1FJH|A Chain A, The Crystal Structure Of 3-Alpha-Hydroxysteroid Dehydrogenase From Comamonas Testosteroni, A Member Of The Short Chain DehydrogenaseREDUCTASE FAMILY Length = 257

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 14/185 (7%)
Query: 82  PQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAH 141
           PQ + L N VS  + G   +           P L+   +  ++V+S+   ++ HL    +
Sbjct: 74  PQTKVLGNVVSVNYFGATELM------DAFLPALKKGHQPAAVVISSV--ASAHLAFDKN 125
Query: 142 PL---LRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSV 198
           PL   L A   A    +    G    N+   Y+ +K A+    +  A  W +  +R N++
Sbjct: 126 PLALALEAGEEAKARAIVEHAGEQGGNL--AYAGSKNALTVAVRKRAAAWGEAGVRLNTI 183
Query: 199 APWYIRTPFTEPLLGNGKFVDEV-KSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVC 257
           AP    TP  +  L + ++ + + K   PMGR  EP E++S++AFL  PAASY+ G  + 
Sbjct: 184 APGATETPLLQAGLQDPRYGESIAKFVPPMGRRAEPSEMASVIAFLMSPAASYVHGAQIV 243
Query: 258 IDGGF 262
           IDGG 
Sbjct: 244 IDGGI 248

>pdb|3SX2|A Chain A, Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Paratuberculosis In Complex With Nad Length = 278

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/287 (28%), Positives = 125/287 (43%), Gaps = 46/287 (16%)
Query: 9   SHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGA---TVHTCSR---------TETE 56
           S  R +   L G  A +TG  +G G A    L+  GA    V  C +         T  E
Sbjct: 2   SMPRSSEGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEE 61
Query: 57  LNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN--GKLNIFVNNVGTSVLKPT 114
           L   +  ++  G ++     DV     R++L   + +  +  G+L+I V N G +     
Sbjct: 62  LAATVKLVEDIGSRIVARQADVR---DRESLSAALQAGLDELGRLDIVVANAGIA----P 114
Query: 115 LEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIV---SANVGTV- 169
           +    + +  V+  N    +H  ++A P L   G   SIVL+SS+ G+    SA+ G+V 
Sbjct: 115 MSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVG 174
Query: 170 YSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDE------VKS 223
           Y A K  +  L +  A   A   IR NS+ P  + TP       N +F  E        +
Sbjct: 175 YVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMI-----NNEFTREWLAKMAAAT 229
Query: 224 RTPMGRLGE--------PKEVSSLVAFLCMPAASYITGQTVCIDGGF 262
            TP G +G         P++V++ VA+L    A YITG T+ +D GF
Sbjct: 230 DTP-GAMGNAMPVEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGF 275

>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 114/256 (44%), Gaps = 15/256 (5%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           L G  ALVTG  +G+G AV   L  LGA  V   + +  +  + +  ++  G        
Sbjct: 16  LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKA 75
Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           D+   P+   L +   + F G L+I V+N G        +   E+F  V S N    F +
Sbjct: 76  DIRQVPEIVKLFDQAVAHF-GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFV 134
Query: 137 CQLAHPLLRASGAASIVLMSSALG-IVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRT 195
            + A+  L   G   IVL SS      S    +++S +KGA++   +  + +     I  
Sbjct: 135 AREAYRHLTEGG--RIVLTSSNTSKDFSVPKHSLFSGSKGAVDSFVRIFSKDCGDKKITV 192
Query: 196 NSVAPWYIRTPF----TEPLLGNG-KFVDEVKSR-----TPMGRLGEPKEVSSLVAFLCM 245
           N+VAP    T      +   + NG  +  E + +     +P+ R G P++V+++V FL  
Sbjct: 193 NAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVGFLVS 252
Query: 246 PAASYITGQTVCIDGG 261
               ++ G+ + +DGG
Sbjct: 253 KEGEWVNGKVLTLDGG 268

>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 106/251 (42%), Gaps = 18/251 (7%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L G TALVTG  +G+G A+   L+  GATV                +   G K      D
Sbjct: 4   LAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI---GKKARAIAAD 60
Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           +S     + L   + +L  G ++I VNN          + + + +  ++  N    F + 
Sbjct: 61  ISDPGSVKALFAEIQAL-TGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVT 119
Query: 138 QLAHPLLRASG-AASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTN 196
           +      RA+G A  ++ ++S            Y A KG +    + LA E  K NI  N
Sbjct: 120 RAGTDQXRAAGKAGRVISIASNTFFAGTPNXAAYVAAKGGVIGFTRALATELGKYNITAN 179
Query: 197 SVAPWYIRT------PFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY 250
           +V P  I +      P  E       FV+ +++    G   +P+ ++ +V+FL    A +
Sbjct: 180 AVTPGLIESDGVKASPHNEAF----GFVEXLQAXKGKG---QPEHIADVVSFLASDDARW 232
Query: 251 ITGQTVCIDGG 261
           ITGQT+ +D G
Sbjct: 233 ITGQTLNVDAG 243

>pdb|2Z1N|A Chain A, Crystal Structure Of Ape0912 From Aeropyrum Pernix K1 Length = 260

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 115/258 (44%), Gaps = 19/258 (7%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           +QG  A+VT G+ GLG A   EL+  GA +   SR   +L      +      V+G+  D
Sbjct: 5   IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASL---VSGAQVD 61
Query: 78  VSSRPQRQTLINTVSSLFN-----GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFES 132
           + +   R+     +  LF      G  +I V + G       +E   ED+         S
Sbjct: 62  IVAGDIREP--GDIDRLFEKARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARS 119
Query: 133 AFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDN 192
           A  + + A   +   G   +V + S   +       + +  +  +  + + LA E A   
Sbjct: 120 AVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPHG 179
Query: 193 IRTNSVAPWYI-----RTPFTEPLLGNGKFVDE----VKSRTPMGRLGEPKEVSSLVAFL 243
           +  N+V P  I     R+   E    +G  V+E    + SR PMGR+G+P+E++S+VAFL
Sbjct: 180 VTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAFL 239
Query: 244 CMPAASYITGQTVCIDGG 261
               AS+ITG  + +DGG
Sbjct: 240 ASEKASFITGAVIPVDGG 257

>pdb|2AG5|A Chain A, Crystal Structure Of Human Dhrs6 Length = 246

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 98/215 (45%), Gaps = 10/215 (4%)
Query: 55  TELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPT 114
           T++NE       K   +   V DV+ + Q     N V      +L++  N  G       
Sbjct: 36  TDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVE-----RLDVLFNVAGFVHHGTV 90
Query: 115 LEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGT-VYSAT 173
           L+   +D+   M+ N  S + + +   P + A  + +I+ MSS    V   V   VYS T
Sbjct: 91  LDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTT 150
Query: 174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTP-FTEPLLGNG---KFVDEVKSRTPMGR 229
           K A+  L K++A ++ +  IR N V P  + TP   E +   G   +  ++   R   GR
Sbjct: 151 KAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGR 210
Query: 230 LGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTV 264
               +E++ L  +L    ++Y+TG  V IDGG+++
Sbjct: 211 FATAEEIAMLCVYLASDESAYVTGNPVIIDGGWSL 245

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 74.3 bits (181), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 104/232 (44%), Gaps = 12/232 (5%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           SL G  A+VTG ++G+G A+  +L  LGA V   +R   +L      +   G +     C
Sbjct: 26  SLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHAC 85
Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVL-KPTLEYNAEDFSLVMSTNFESAFH 135
           D+S           V +  +G+ ++ VNN G      P       ++  +++ N ++ + 
Sbjct: 86  DLSHSDAIAAFATGVLA-AHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYL 144
Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRT 195
           L +   P + A+    I+ +SS  G      G  Y+A+K  +N L  + A E  +  +R 
Sbjct: 145 LLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQVRV 204
Query: 196 NSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA 247
           + VAP  +RT F   L            ++ +G + EP +++ +VA L   A
Sbjct: 205 SLVAPGSVRTEFGVGLSAK---------KSALGAI-EPDDIADVVALLATQA 246

>pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella Enterica Length = 294

Iteration: 1
 Score = 73.9 bits (180), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 111/250 (44%), Gaps = 12/250 (4%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATV--HTCSRTETELNECIHHLQMKGLKVTGSV 75
           L+   ALVTGG  G+G A     +  GA V  +     E +  +    ++  G K     
Sbjct: 47  LKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLP 106
Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTL-EYNAEDFSLVMSTNFESAF 134
            D+S     ++L++       G L+I     G     P + +  +E F    + N  + F
Sbjct: 107 GDLSDESFARSLVHKAREALGG-LDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALF 165
Query: 135 HLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIR 194
            + Q A PLL     ASI+  SS      +     Y+ATK A+   ++ LA + A+  IR
Sbjct: 166 WITQEAIPLL--PKGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIR 223
Query: 195 TNSVAPWYIRTPFTEPLLGNGKFVDEVKS---RTPMGRLGEPKEVSSLVAFLCMPAASYI 251
            N VAP  I T      +  G+  D++     +TPM R G+P E++ +  +L    +SY+
Sbjct: 224 VNIVAPGPIWTALQ---ISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYV 280
Query: 252 TGQTVCIDGG 261
           T +   + GG
Sbjct: 281 TAEVHGVCGG 290

>pdb|2O23|A Chain A, The Structure Of Wild-Type Human Hadh2 (17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To Nad+ At 1.2 A Length = 265

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 119/263 (45%), Gaps = 33/263 (12%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           S++G+ A++TGG  GLGLA  E L   GA     S    +L       Q K L   G+ C
Sbjct: 9   SVKGLVAVITGGASGLGLATAERLVGQGA-----SAVLLDLPNSGGEAQAKKL---GNNC 60
Query: 77  -----DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSV------LKPTLEYNAEDFSLV 125
                DV+S    QT +      F G++++ VN  G +V      LK    +  EDF  V
Sbjct: 61  VFAPADVTSEKDVQTALALAKGKF-GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRV 119
Query: 126 MSTNFESAFHLCQLAHPLL-----RASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQ 179
           +  N    F++ +L    +        G   +++ ++++      VG   YSA+KG +  
Sbjct: 120 LDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVG 179
Query: 180 LAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPM-GRLGEPKEVSS 238
           +   +A + A   IR  ++AP    TP    L    K  + + S+ P   RLG+P E + 
Sbjct: 180 MTLPIARDLAPIGIRVMTIAPGLFGTPLLTSL--PEKVCNFLASQVPFPSRLGDPAEYAH 237
Query: 239 LV-AFLCMPAASYITGQTVCIDG 260
           LV A +  P   ++ G+ + +DG
Sbjct: 238 LVQAIIENP---FLNGEVIRLDG 257

>pdb|2DKN|A Chain A, Crystal Structure Of The 3-alpha-hydroxysteroid Dehydrogenase From Pseudomonas Sp. B-0831 Complexed With Nadh Length = 255

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 110/265 (41%), Gaps = 51/265 (19%)
Query: 25  VTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQR 84
           +TG   G+G A+ E L+  G TV    R + ++                   D+S+   R
Sbjct: 6   ITGSASGIGAALKELLARAGHTVIGIDRGQADIE-----------------ADLSTPGGR 48
Query: 85  QTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQ-LAHPL 143
           +T +  V     G L+  V   G  V        A +  LV++ N+     L   LA  L
Sbjct: 49  ETAVAAVLDRCGGVLDGLVCCAGVGV-------TAANSGLVVAVNYFGVSALLDGLAEAL 101
Query: 144 LRASGAASIVLMSSA--------LGIVSANVGT-----------------VYSATKGAMN 178
            R    A++++ S A        L +V A +                    Y+ +K A+ 
Sbjct: 102 SRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQTHLAYAGSKYAVT 161
Query: 179 QLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKS-RTPMGRLGEPKEVS 237
            LA+    +WA   +R N VAP  + TP  +    + ++ +  +    P+GR  EP+EV+
Sbjct: 162 CLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFVAPLGRGSEPREVA 221
Query: 238 SLVAFLCMPAASYITGQTVCIDGGF 262
             +AFL  P AS+I G  + +DGG 
Sbjct: 222 EAIAFLLGPQASFIHGSVLFVDGGM 246

>pdb|1SO8|A Chain A, Abeta-bound Human Abad Structure [also Known As 3-hydroxyacyl-coa Dehydrogenase Type Ii (type Ii Hadh), Endoplasmic Reticulum- Associated Amyloid Beta-peptide Binding Protein (erab)] Length = 261

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 119/263 (45%), Gaps = 33/263 (12%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           S++G+ A++TGG  GLGLA  E L   GA     S    +L       Q K L   G+ C
Sbjct: 7   SVKGLVAVITGGASGLGLATAERLVGQGA-----SAVLLDLPNSGGEAQAKKL---GNNC 58
Query: 77  -----DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSV------LKPTLEYNAEDFSLV 125
                DV+S    QT +      F G++++ VN  G +V      LK    +  EDF  V
Sbjct: 59  VFAPADVTSEKDVQTALALAKGKF-GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRV 117
Query: 126 MSTNFESAFHLCQLAHPLL-----RASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQ 179
           +  N    F++ +L    +        G   +++ ++++      VG   YSA+KG +  
Sbjct: 118 LDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVG 177
Query: 180 LAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPM-GRLGEPKEVSS 238
           +   +A + A   IR  ++AP    TP    L    K  + + S+ P   RLG+P E + 
Sbjct: 178 MTLPIARDLAPIGIRVMTIAPGLFGTPLLTSL--PEKVCNFLASQVPFPSRLGDPAEYAH 235
Query: 239 LV-AFLCMPAASYITGQTVCIDG 260
           LV A +  P   ++ G+ + +DG
Sbjct: 236 LVQAIIENP---FLNGEVIRLDG 255

>pdb|1U7T|A Chain A, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR Length = 261

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 119/263 (45%), Gaps = 33/263 (12%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           S++G+ A++TGG  GLGLA  E L   GA     S    +L       Q K L   G+ C
Sbjct: 7   SVKGLVAVITGGASGLGLATAERLVGQGA-----SAVLLDLPNSGGEAQAKKL---GNNC 58
Query: 77  -----DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSV------LKPTLEYNAEDFSLV 125
                DV+S    QT +      F G++++ VN  G +V      LK    +  EDF  V
Sbjct: 59  VFAPADVTSEKDVQTALALAKGKF-GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRV 117
Query: 126 MSTNFESAFHLCQLAHPLL-----RASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQ 179
           +  N    F++ +L    +        G   +++ ++++      VG   YSA+KG +  
Sbjct: 118 LDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVG 177
Query: 180 LAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPM-GRLGEPKEVSS 238
           +   +A + A   IR  ++AP    TP    L    K  + + S+ P   RLG+P E + 
Sbjct: 178 MTLPIARDLAPIGIRVMTIAPGLFGTPLLTSL--PEKVRNFLASQVPFPSRLGDPAEYAH 235
Query: 239 LV-AFLCMPAASYITGQTVCIDG 260
           LV A +  P   ++ G+ + +DG
Sbjct: 236 LVQAIIENP---FLNGEVIRLDG 255

>pdb|2FWM|X Chain X, Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodihydroxy Benzoate Dehydrogenase Length = 250

Iteration: 1
 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 103/257 (40%), Gaps = 21/257 (8%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
              G    VTG  KG+G A        GA V       T  ++     Q         V 
Sbjct: 4   DFSGKNVWVTGAGKGIGYATALAFVEAGAKV-------TGFDQAFTQEQYPFATEVMDVA 56
Query: 77  DVSSRPQR-QTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
           D +   Q  Q L+         +L+  VN  G   +  T + + ED+    + N   AF+
Sbjct: 57  DAAQVAQVCQRLLAETE-----RLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFN 111
Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRT 195
           L Q      R     +IV ++S          + Y A+K A+  LA ++  E A   +R 
Sbjct: 112 LFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGVRC 171
Query: 196 NSVAPWYIRTPFTEPLLGNGK--------FVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA 247
           N V+P    T     L  +          F ++ K   P+G++  P+E+++ + FL    
Sbjct: 172 NVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASDL 231
Query: 248 ASYITGQTVCIDGGFTV 264
           AS+IT Q + +DGG T+
Sbjct: 232 ASHITLQDIVVDGGSTL 248

>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301

Iteration: 1
 Score = 71.2 bits (173), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 95/219 (43%), Gaps = 11/219 (5%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
             G  A+VTGG  G+GLA   E +  GA +      +  L + ++ L+ +G    G VCD
Sbjct: 29  FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCD 88
Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           V    +   L +    L  G +++  +N G  V  P  + N +D+  V+  +   + H  
Sbjct: 89  VRHLDEMVRLADEAFRLLGG-VDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAV 147
Query: 138 QLAHP-LLRASGAASIVLMSSALGIV-SANVGTVYSATKGAMNQLAKNLACEWAKDNIRT 195
           +   P LL       I   +S  G+V +A +GT Y   K  +  LA+ LA E   + I  
Sbjct: 148 EAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGT-YGVAKYGVVGLAETLAREVKPNGIGV 206
Query: 196 NSVAPWYIRTPF---TEPLLGNGKFVDEVKSRTPMGRLG 231
           + + P  + T     +E + G     D   S TP G  G
Sbjct: 207 SVLCPMVVETKLVSNSERIRG----ADYGMSATPEGAFG 241

>pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nad Length = 299

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 122/274 (44%), Gaps = 34/274 (12%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGA---TVHTCSR---------TETELNECIHHLQ 65
           ++G  A +TG  +G G +    L+  GA    +  C +         T  +L E +  ++
Sbjct: 26  VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVE 85
Query: 66  MKGLKVTGSVCDVSSRPQRQTLINT-VSSLFNGKLNIFVNNVGTSVLKPTL-EYNAEDFS 123
             G ++  S  DV      Q  ++  V+ L  G+L+I + N   +     L   + + + 
Sbjct: 86  ALGRRIIASQVDVRDFDAMQAAVDDGVTQL--GRLDIVLANAALASEGTRLNRMDPKTWR 143
Query: 124 LVMSTNFESAFHLCQLAHP-LLRASGAASIVLMSSALGIVSA-NVGTVYSATKGAMNQLA 181
            ++  N   A+   ++A P ++      SIV  SS  G+  A N+G  Y A+K  ++ L 
Sbjct: 144 DMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGN-YIASKHGLHGLM 202
Query: 182 KNLACEWAKDNIRTNSVAPWYIRTPFT---------EPLLGNGKFVD-EVKSRT----PM 227
           + +A E    NIR N V P  + TP            P L N    D +V SR     P+
Sbjct: 203 RTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLPI 262
Query: 228 GRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGG 261
             + EP ++S+ + FL    A YITG ++ +DGG
Sbjct: 263 PYV-EPADISNAILFLVSDDARYITGVSLPVDGG 295

>pdb|1PWX|A Chain A, Crystal Structure Of The Haloalcohol Dehalogenase Hhec Complexed With Bromide Length = 254

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 108/250 (43%), Gaps = 14/250 (5%)
Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
           TA+VT      G+     LS  G TV     +  + +E      ++    T       S 
Sbjct: 3   TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDE------LEAFAETYPQLKPMSE 56
Query: 82  PQRQTLINTVSSLFNGKLNIFV-NNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLA 140
            +   LI  V+S + G++++ V N++     +P  +Y  ED+   +       F L    
Sbjct: 57  QEPAELIEAVTSAY-GQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAV 115
Query: 141 HPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAP 200
              ++   +  I+ ++SA         + Y++ +     LA  L+ E  + NI   ++ P
Sbjct: 116 ASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGP 175
Query: 201 WYIRT---PF---TEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ 254
            Y+ +   P+   TEP   N + V  VK  T + RLG  KE+  LVAFL   +  Y+TGQ
Sbjct: 176 NYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLTGQ 235
Query: 255 TVCIDGGFTV 264
              + GGF +
Sbjct: 236 VFWLAGGFPM 245

>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 85/193 (44%), Gaps = 7/193 (3%)
Query: 18  LQGMTA--LVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSV 75
           ++GM    L+TG ++G+G A    L   G  V   +R E  L      L+   L + G  
Sbjct: 1   MEGMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE-GALPLPG-- 57
Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
            DV         +  +   F G+L+  VNN G  V+KP  E   E++ LV+ TN   AF 
Sbjct: 58  -DVREEGDWARAVAAMEEAF-GELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFL 115
Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRT 195
             + A P L   G  +IV + S  G      G  Y+A+K  +  LA     +  + N+R 
Sbjct: 116 GIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRV 175
Query: 196 NSVAPWYIRTPFT 208
            +V P  + T F 
Sbjct: 176 VNVLPGSVDTGFA 188

>pdb|3SVT|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 281

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 116/249 (46%), Gaps = 5/249 (2%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLK---VTG 73
           S Q  T LVTGG  G+G  V   L   GA+V    R   +L   +  L+  G     +  
Sbjct: 8   SFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRY 67
Query: 74  SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSV-LKPTLEYNAEDFSLVMSTNFES 132
              D+++  +    ++ V++ ++G+L+  V+  G S  + P  + ++E +   +  N   
Sbjct: 68  EPTDITNEDETARAVDAVTA-WHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNG 126
Query: 133 AFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDN 192
             ++ + A   +   G  S V +SS     +      Y  TK A++ L +  A E     
Sbjct: 127 TMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADELGASW 186
Query: 193 IRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT 252
           +R NS+ P  IRT     +  + +   +    TP+ R GE ++V+++  FL   AAS++T
Sbjct: 187 VRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAMFLLSDAASFVT 246
Query: 253 GQTVCIDGG 261
           GQ + +DGG
Sbjct: 247 GQVINVDGG 255

>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 106/249 (42%), Gaps = 18/249 (7%)
Query: 24  LVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECI-HHLQMKGLKVTGSVCDVSSRP 82
           LVTGG++G+G AV    +  G  V        E  + +   +   G +      DV +  
Sbjct: 30  LVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAA 89
Query: 83  QRQTLINTVSSLFNGKLNIFVNNVG-TSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAH 141
                 + V   F G+L+  VNN G     +   E + E     +  N   +  LC  A 
Sbjct: 90  DIAAXFSAVDRQF-GRLDGLVNNAGIVDYPQRVDEXSVERIERXLRVNVTGSI-LCA-AE 146
Query: 142 PLLRAS------GAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRT 195
            + R S      G A + + S A  + SA     Y+A+K A++     LA E A + IR 
Sbjct: 147 AVRRXSRLYSGQGGAIVNVSSXAAILGSATQYVDYAASKAAIDTFTIGLAREVAAEGIRV 206
Query: 196 NSVAPWYIRTPFTEPLLGNGKFVD---EVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT 252
           N+V P  I T     L  +G   D   E     P  R G P+EV+  + +L  P+ASY+T
Sbjct: 207 NAVRPGIIETD----LHASGGLPDRAREXAPSVPXQRAGXPEEVADAILYLLSPSASYVT 262
Query: 253 GQTVCIDGG 261
           G  + + GG
Sbjct: 263 GSILNVSGG 271

>pdb|1ULU|A Chain A, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8 Length = 261

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 110/260 (42%), Gaps = 18/260 (6%)
Query: 17  SLQGMTALVTGGT--KGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGS 74
            L G  ALV G T  + LG A+  +L   GA V    + E    E     +  G    G+
Sbjct: 5   DLSGKKALVXGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALG----GA 60
Query: 75  V---CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPT----LEYNAEDFSLVMS 127
           +    DV+   +   L   V   F G L+  V+ +  +  +      ++   +D+ L + 
Sbjct: 61  LLFRADVTQDEELDALFAGVKEAFGG-LDYLVHAIAFAPREAXEGRYIDTRRQDWLLALE 119
Query: 128 TNFESAFHLCQLAHPLLRASGA-ASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLAC 186
            +  S   + + A PLLR  G   ++   +S   +   NV  +    K A+    + LA 
Sbjct: 120 VSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVXAI---AKAALEASVRYLAY 176
Query: 187 EWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP 246
           E     +R N+++   +RT     + G  K  D V    P+ R    +EV +L  FL  P
Sbjct: 177 ELGPKGVRVNAISAGPVRTVAARSIPGFTKXYDRVAQTAPLRRNITQEEVGNLGLFLLSP 236
Query: 247 AASYITGQTVCIDGGFTVNG 266
            AS ITG+ V +D G+ + G
Sbjct: 237 LASGITGEVVYVDAGYHIXG 256

>pdb|1E3S|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh Length = 261

Iteration: 1
 Score = 68.6 bits (166), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 118/265 (44%), Gaps = 37/265 (13%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTC----SRTETELNE----CIHHLQMKG 68
           S++G+ A++TGG  GLGL+  + L   GAT        S  ETE  +    CI       
Sbjct: 7   SVKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKLGGNCIF------ 60
Query: 69  LKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLE------YNAEDF 122
                +  +V+S  + Q  +      F G++++ VN  G +V   T        +  EDF
Sbjct: 61  -----APANVTSEKEVQAALTLAKEKF-GRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDF 114
Query: 123 SLVMSTNFESAFHLCQLAHPLL-----RASGAASIVLMSSALGIVSANVG-TVYSATKGA 176
             V++ N    F++ +L   ++        G   +++ ++++      VG   YSA+KG 
Sbjct: 115 QRVINVNLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGG 174
Query: 177 MNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPM-GRLGEPKE 235
           +  +   +A + A   IR  ++AP    TP    L    K  + + S+ P   RLG+P E
Sbjct: 175 IVGMTLPIARDLAPIGIRVVTIAPGLFATPLLTTL--PDKVRNFLASQVPFPSRLGDPAE 232
Query: 236 VSSLVAFLCMPAASYITGQTVCIDG 260
            + LV  +      ++ G+ + +DG
Sbjct: 233 YAHLVQMVI--ENPFLNGEVIRLDG 255

>pdb|2YW9|A Chain A, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8 Length = 261

Iteration: 1
 Score = 68.6 bits (166), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 109/260 (41%), Gaps = 16/260 (6%)
Query: 17  SLQGMTALVTGGT--KGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGS 74
            L G  ALV G T  + LG A+  +L   GA V    + E    E     +  G    G+
Sbjct: 5   DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALG----GA 60
Query: 75  V---CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPT----LEYNAEDFSLVMS 127
           +    DV+   +   L   V   F G L+  V+ +  +  +      ++   +D+ L + 
Sbjct: 61  LLFRADVTQDEELDALFAGVKEAFGG-LDYLVHAIAFAPREAMEGRYIDTRRQDWLLALE 119
Query: 128 TNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACE 187
            +  S   + + A PLLR  G    +   ++  +V      V +  K A+    + LA E
Sbjct: 120 VSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKY--NVMAIAKAALEASVRYLAYE 177
Query: 188 WAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA 247
                +R N+++   +RT     + G  K  D V    P+ R    +EV +L  FL  P 
Sbjct: 178 LGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPL 237
Query: 248 ASYITGQTVCIDGGFTVNGF 267
           AS ITG+ V +D G+ + G 
Sbjct: 238 ASGITGEVVYVDAGYHIMGM 257

>pdb|1E6W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And Estradiol Length = 260

Iteration: 1
 Score = 68.6 bits (166), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 118/265 (44%), Gaps = 37/265 (13%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTC----SRTETELNE----CIHHLQMKG 68
           S++G+ A++TGG  GLGL+  + L   GAT        S  ETE  +    CI       
Sbjct: 6   SVKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKLGGNCIF------ 59
Query: 69  LKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLE------YNAEDF 122
                +  +V+S  + Q  +      F G++++ VN  G +V   T        +  EDF
Sbjct: 60  -----APANVTSEKEVQAALTLAKEKF-GRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDF 113
Query: 123 SLVMSTNFESAFHLCQLAHPLL-----RASGAASIVLMSSALGIVSANVG-TVYSATKGA 176
             V++ N    F++ +L   ++        G   +++ ++++      VG   YSA+KG 
Sbjct: 114 QRVINVNLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGG 173
Query: 177 MNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPM-GRLGEPKE 235
           +  +   +A + A   IR  ++AP    TP    L    K  + + S+ P   RLG+P E
Sbjct: 174 IVGMTLPIARDLAPIGIRVVTIAPGLFATPLLTTL--PDKVRNFLASQVPFPSRLGDPAE 231
Query: 236 VSSLVAFLCMPAASYITGQTVCIDG 260
            + LV  +      ++ G+ + +DG
Sbjct: 232 YAHLVQMVI--ENPFLNGEVIRLDG 254

>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247

Iteration: 1
 Score = 68.2 bits (165), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 92/186 (49%), Gaps = 6/186 (3%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           +LQG  AL+TG + G+G A    L+  GA V   +R   +L      L   G KV     
Sbjct: 4   ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLEL 63
Query: 77  DVSSRPQRQTLI-NTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
           DV+ R      + +TV +L  G L+I VNN G  +L P  + +  D++ ++ TN     +
Sbjct: 64  DVADRQGVDAAVASTVEAL--GGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMY 121
Query: 136 LCQLAHP-LLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIR 194
           + + A P LLR+ G  ++V MSS  G V+     VY ATK  +N  ++ L  E  +  +R
Sbjct: 122 MTRAALPHLLRSKG--TVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGVR 179
Query: 195 TNSVAP 200
              + P
Sbjct: 180 VVVIEP 185

>pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From Polaromonas Sp. Js666 In Nadp Bound Form Length = 271

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 103/244 (42%), Gaps = 8/244 (3%)
Query: 24  LVTGGTKGLGLAVVEELSMLGATVHT-CSRTETELNECIHHLQMKGLKVTGSVCDVSSRP 82
           L+TGG++G+G A     +  G  V    +      +E +  ++  G +      DV+   
Sbjct: 29  LITGGSRGIGAASALLAARQGYAVAVNYASNSAAADEVVRQIREAGGQALAVQADVAKER 88
Query: 83  QRQTLINTVSSLFNGKLNIFVNNVG-----TSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           +      TV +   G+L+  VNN G     T V   TLE     F + +  +F  A    
Sbjct: 89  EVLAXFETVDAQL-GRLSALVNNAGVVDQTTRVDGITLERLQRXFEINVFGSFLCAREAV 147
Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNS 197
           +        SG + + + S+A  + S      Y+A KGA++     LA E A + IR N+
Sbjct: 148 KRXSTRYGGSGGSIVNVSSAAARLGSPGQYVDYAAAKGAIDTFTLGLAKEVATEGIRVNA 207
Query: 198 VAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVC 257
           V P  I T       G      +V  + P  R G  +EV+  + +L    ASY TG  + 
Sbjct: 208 VRPGIIETDI-HASGGLPNRARDVAPQVPXQRAGTAREVAEAIVWLLGDQASYTTGALLD 266
Query: 258 IDGG 261
           + GG
Sbjct: 267 VTGG 270

>pdb|1E3W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And 3-Keto Butyrate Length = 261

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 118/265 (44%), Gaps = 37/265 (13%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTC----SRTETELNE----CIHHLQMKG 68
           S++G+ A++TGG  GLGL+  + L   GAT        S  ETE  +    CI       
Sbjct: 7   SVKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKLGGNCIF------ 60
Query: 69  LKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLE------YNAEDF 122
                +  +V+S  + Q  +      F G++++ VN  G +V   T        +  EDF
Sbjct: 61  -----APANVTSEKEVQAALTLAKEKF-GRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDF 114
Query: 123 SLVMSTNFESAFHLCQLAHPLL-----RASGAASIVLMSSALGIVSANVG-TVYSATKGA 176
             V++ N    F++ +L   ++        G   +++ ++++      VG   YSA+KG 
Sbjct: 115 QRVINVNLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGG 174
Query: 177 MNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPM-GRLGEPKE 235
           +  +   +A + A   IR  ++AP    TP    L    +  + + S+ P   RLG+P E
Sbjct: 175 IVGMTLPIARDLAPIGIRVVTIAPGLFATPLLTTLPDTVR--NFLASQVPFPSRLGDPAE 232
Query: 236 VSSLVAFLCMPAASYITGQTVCIDG 260
            + LV  +      ++ G+ + +DG
Sbjct: 233 YAHLVQMVI--ENPFLNGEVIRLDG 255

>pdb|4GKB|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog (Target Efi- 505321) From Burkholderia Multivorans, Unliganded Structure Length = 258

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 86/187 (45%), Gaps = 13/187 (6%)
Query: 84  RQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPL 143
           R  +  T+++   G+L+  VNN G +     L+   + F   +  N    + +     P 
Sbjct: 71  RDAVAQTIATF--GRLDGLVNNAGVND-GIGLDAGRDAFVASLERNLIHYYAMAHYCVPH 127
Query: 144 LRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYI 203
           L+A+  A IV +SS   +      + Y A+KGA   L +  A    +  +R N+V P  +
Sbjct: 128 LKATRGA-IVNISSKTAVTGQGNTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEV 186
Query: 204 RTPFTEPLLGNGKFVD------EVKSRTPMGR-LGEPKEVSSLVAFLCMPAASYITGQTV 256
            TP     +    F D      E+ ++ P+GR    P E++    FL  P AS+ TG+ +
Sbjct: 187 MTPLYRNWIAT--FEDPEAKLAEIAAKVPLGRRFTTPDEIADTAVFLLSPRASHTTGEWL 244
Query: 257 CIDGGFT 263
            +DGG+T
Sbjct: 245 FVDGGYT 251

>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh Length = 454

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 108/250 (43%), Gaps = 19/250 (7%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSV-- 75
           L G  A+VTG  +G+G  + E  +  GA V        ++     +L     KV G+   
Sbjct: 211 LDGKVAIVTGAARGIGATIAEVFARDGAHV-----VAIDVESAAENLAETASKVGGTALW 265
Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
            DV++      +   +     GK +I VNN G +  K     +   +  V++ N  +   
Sbjct: 266 LDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLAPLR 325
Query: 136 LCQ--LAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNI 193
           L +  + +  +   G   ++ +SS  GI      T Y+ TK  M  + + LA   A   I
Sbjct: 326 LTEGLVGNGSIGEGG--RVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGI 383
Query: 194 RTNSVAPWYIRTPFTE--PLLGNGKFVDEVKSR-TPMGRLGEPKEVSSLVAFLCMPAASY 250
             N+VAP +I T  T   PL        EV  R   + + G+P +V+  +A+   PA++ 
Sbjct: 384 TINAVAPGFIETQMTAAIPLA-----TREVGRRLNSLLQGGQPVDVAEAIAYFASPASNA 438
Query: 251 ITGQTVCIDG 260
           +TG  + + G
Sbjct: 439 VTGNVIRVCG 448

>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom Resolution Length = 462

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 110/250 (44%), Gaps = 23/250 (9%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSV-- 75
           L G  A+VTG  +G+G  + E  +  GA V        ++     +L     KV G+   
Sbjct: 219 LDGKVAIVTGAARGIGATIAEVFARDGAHV-----VAIDVESAAENLAETASKVGGTALW 273
Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAED--FSLVMSTNFESA 133
            DV++      +   +     GK +I VNN G  + +  L  N +D  +  V++ N  + 
Sbjct: 274 LDVTADDAVDKISEHLRDHHGGKADILVNNAG--ITRDKLLANMDDARWDAVLAVNLLAP 331
Query: 134 FHLCQ--LAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKD 191
             L +  + +  +   G   ++ +SS  GI      T Y+ TK  M  + + LA   A  
Sbjct: 332 LRLTEGLVGNGSIGEGG--RVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAK 389
Query: 192 NIRTNSVAPWYIRTPFTE--PLLGNGKFVDEVKSR-TPMGRLGEPKEVSSLVAFLCMPAA 248
            I  N+VAP +I T  T   PL        EV  R   + + G+P +V+  +A+   PA+
Sbjct: 390 GITINAVAPGFIETQMTAAIPLA-----TREVGRRLNSLLQGGQPVDVAEAIAYFASPAS 444
Query: 249 SYITGQTVCI 258
           + +TG  + +
Sbjct: 445 NAVTGNVIRV 454

>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex Length = 446

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 107/248 (43%), Gaps = 19/248 (7%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSV-- 75
           L G  A+VTG  +G+G  + E  +  GA V        ++     +L     KV G+   
Sbjct: 203 LDGKVAIVTGAARGIGATIAEVFARDGAHV-----VAIDVESAAENLAETASKVGGTALW 257
Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
            DV++      +   +     GK +I VNN G +  K     +   +  V++ N  +   
Sbjct: 258 LDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLAPLR 317
Query: 136 LCQ--LAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNI 193
           L +  + +  +   G   ++ +SS  GI      T Y+ TK  M  + + LA   A   I
Sbjct: 318 LTEGLVGNGSIGEGG--RVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGI 375
Query: 194 RTNSVAPWYIRTPFTE--PLLGNGKFVDEVKSR-TPMGRLGEPKEVSSLVAFLCMPAASY 250
             N+VAP +I T  T   PL        EV  R   + + G+P +V+  +A+   PA++ 
Sbjct: 376 TINAVAPGFIETQMTAAIPLA-----TREVGRRLNSLLQGGQPVDVAEAIAYFASPASNA 430
Query: 251 ITGQTVCI 258
           +TG  + +
Sbjct: 431 VTGNVIRV 438

>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 2.5 Angstrom Resolution Length = 432

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 103/246 (41%), Gaps = 15/246 (6%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSV-- 75
           L G  A+VTG  +G+G  + E  +  GA V        ++     +L     KV G+   
Sbjct: 195 LDGKVAIVTGAARGIGATIAEVFARDGAHV-----VAIDVESAAENLAETASKVGGTALW 249
Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
            DV++      +   +     GK +I VNN G +  K     +   +  V++ N  +   
Sbjct: 250 LDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLAPLR 309
Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRT 195
           L +             ++ +SS  GI      T Y+ TK  M  + + LA   A   I  
Sbjct: 310 LTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGITI 369
Query: 196 NSVAPWYIRTPFTE--PLLGNGKFVDEVKSR-TPMGRLGEPKEVSSLVAFLCMPAASYIT 252
           N+VAP +I T  T   PL        EV  R   + + G+P +V+  +A+   PA++ +T
Sbjct: 370 NAVAPGFIETQMTAAIPLA-----TREVGRRLNSLLQGGQPVDVAEAIAYFASPASNAVT 424
Query: 253 GQTVCI 258
           G  + +
Sbjct: 425 GNVIRV 430

>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Tuberculosis Length = 475

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 107/248 (43%), Gaps = 19/248 (7%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSV-- 75
           L G  A+VTG  +G+G  + E  +  GA V        ++     +L     KV G+   
Sbjct: 232 LDGKVAIVTGAARGIGATIAEVFARDGAHV-----VAIDVESAAENLAETASKVGGTALW 286
Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
            DV++      +   +     GK +I VNN G +  K     +   +  V++ N  +   
Sbjct: 287 LDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLAPLR 346
Query: 136 LCQ--LAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNI 193
           L +  + +  +   G   ++ +SS  GI      T Y+ TK  M  + + LA   A   I
Sbjct: 347 LTEGLVGNGSIGEGG--RVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGI 404
Query: 194 RTNSVAPWYIRTPFTE--PLLGNGKFVDEVKSR-TPMGRLGEPKEVSSLVAFLCMPAASY 250
             N+VAP +I T  T   PL        EV  R   + + G+P +V+  +A+   PA++ 
Sbjct: 405 TINAVAPGFIETQMTAAIPLA-----TREVGRRLNSLLQGGQPVDVAEAIAYFASPASNA 459
Query: 251 ITGQTVCI 258
           +TG  + +
Sbjct: 460 VTGNVIRV 467

>pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 86/169 (50%), Gaps = 16/169 (9%)
Query: 98  KLNIFVNNV--GTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHP-LLRASGAASIVL 154
           ++++ VNN   G+  +  +L Y  E+F  ++S   ++ + L +L    L++  G   I+ 
Sbjct: 75  RIDVLVNNACRGSKGILSSLLY--EEFDYILSVGLKAPYELSRLCRDELIKNKG--RIIN 130
Query: 155 MSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN 214
           ++S     S      Y++ KG +  L   LA     D +  N +AP +I    TE     
Sbjct: 131 IASTRAFQSEPDSEAYASAKGGIVALTHALAMSLGPD-VLVNCIAPGWINV--TE----Q 183
Query: 215 GKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFT 263
            +F  E  +  P G++G PK++S++V FLC     +ITG+T+ +DGG +
Sbjct: 184 QEFTQEDCAAIPAGKVGTPKDISNMVLFLCQ--QDFITGETIIVDGGMS 230

>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 101/264 (38%), Gaps = 34/264 (12%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L+G +AL+TG  +G+G A  E     GATV          +  I   +    ++  +   
Sbjct: 6   LEGKSALITGSARGIGRAFAEAYVREGATVAIA-------DIDIERARQAAAEIGPAAYA 58
Query: 78  VSSRPQRQTLINTVSSL---FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESA- 133
           V     RQ  I+   +      G L+I VNN     L P +E   E +  + + N     
Sbjct: 59  VQXDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTL 118
Query: 134 FHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNI 193
           F L   A   +       I+  +S  G     +  +Y ATK A+  L ++   +  K  I
Sbjct: 119 FTLQAAARQXIAQGRGGKIINXASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRI 178
Query: 194 RTNSVAP-------W---------YIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVS 237
             N++AP       W         Y   P  E      + V E     P GR G  ++++
Sbjct: 179 NVNAIAPGVVDGEHWDGVDALFARYENRPRGE----KKRLVGEA---VPFGRXGTAEDLT 231
Query: 238 SLVAFLCMPAASYITGQTVCIDGG 261
               FL    + YI  QT  +DGG
Sbjct: 232 GXAIFLASAESDYIVSQTYNVDGG 255

>pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid Dehydrogenase Type 4 In Complex With Nad Length = 327

Iteration: 1
 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 15/193 (7%)
Query: 18  LQGMTALVTGGTKGLG----LAVVEELSM-----LGATVHTCSRTETELNECIHHLQMKG 68
             G   LVTG   GLG    LA  E  ++     LG       +     ++ +  ++ +G
Sbjct: 28  FDGRVVLVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADKVVEEIRRRG 87
Query: 69  LKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMST 128
            K   +V +  S  + + ++ T    F G++++ VNN G    +     + ED+ ++   
Sbjct: 88  GK---AVANYDSVEEGEKVVKTALDAF-GRIDVVVNNAGILRDRSFARISDEDWDIIHRV 143
Query: 129 NFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACE 187
           +   +F + + A   ++      I++ SSA GI   N G   YSA K  +  LA +LA E
Sbjct: 144 HLRGSFQVTRAAWEHMKKQKYGRIIMTSSASGIY-GNFGQANYSAAKLGLLGLANSLAIE 202
Query: 188 WAKDNIRTNSVAP 200
             K NI  N++AP
Sbjct: 203 GRKSNIHCNTIAP 215

>pdb|3KSU|A Chain A, Crystal Structure Of Short-Chain Dehydrogenase From Oenococcus Oeni Psu-1 Length = 262

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/258 (22%), Positives = 114/258 (44%), Gaps = 24/258 (9%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATV----HTCSRTETELNECIHHLQMKGLKVT 72
            L+    ++ GG K LG    +  ++    +    H    ++T  N+    L+ +G KV 
Sbjct: 8   DLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDT-ANKLKDELEDQGAKVA 66
Query: 73  GSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFES 132
               D+S+  +   L +     F GK++I +N VG  + KP +E +  +F  + + N + 
Sbjct: 67  LYQSDLSNEEEVAKLFDFAEKEF-GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKV 125
Query: 133 AFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDN 192
           A+   + A   +  +G   I+ ++++L        + Y+  K  +    +  + E  K  
Sbjct: 126 AYFFIKQAAKHMNPNG--HIITIATSLLAAYTGFYSTYAGNKAPVEHYTRAASKELMKQQ 183
Query: 193 IRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRT------PMG-RLGEPKEVSSLVAFLCM 245
           I  N++AP  + T F         +  E K  T       MG +L + ++++ ++ FL  
Sbjct: 184 ISVNAIAPGPMDTSFF--------YGQETKESTAFHKSQAMGNQLTKIEDIAPIIKFLTT 235
Query: 246 PAASYITGQTVCIDGGFT 263
               +I GQT+  +GG+T
Sbjct: 236 DGW-WINGQTIFANGGYT 252

>pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid Dehydeogenase (Cad) From Streptomyces Clavuligerus Length = 247

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 89/186 (47%), Gaps = 6/186 (3%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           +LQG  AL+TG + G+G A    L+  GA V   +R   +L      L   G KV     
Sbjct: 4   ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLEL 63
Query: 77  DVSSRPQRQTLI-NTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
           DV+ R      + +TV +L  G L+I VNN G  +L P  + +  D++  + TN     +
Sbjct: 64  DVADRQGVDAAVASTVEAL--GGLDILVNNAGIXLLGPVEDADTTDWTRXIDTNLLGLXY 121
Query: 136 LCQLAHP-LLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIR 194
             + A P LLR+ G  ++V  SS  G V+     VY ATK  +N  ++ L  E  +  +R
Sbjct: 122 XTRAALPHLLRSKG--TVVQXSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGVR 179
Query: 195 TNSVAP 200
              + P
Sbjct: 180 VVVIEP 185

>pdb|4IXT|A Chain A, Structure Of A 37-fold Mutant Of Halohydrin Dehalogenase (hhec) Bound To Ethyl (r)-4-cyano-3-hydroxybutyrate Length = 254

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 107/250 (42%), Gaps = 14/250 (5%)
Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
           TA+VT      G+     LS  G TV  C     +     H  +++    T       S 
Sbjct: 3   TAIVTNVKHFGGMGSALRLSEAGHTV-ACHDESFK-----HQDELEAFAETYPQLIPMSE 56
Query: 82  PQRQTLINTVSSLFNGKLNIFV-NNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLA 140
            +   LI  V+S   G ++I V N++     +P  +Y  ED+  ++       F L    
Sbjct: 57  QEPVELIEAVTSAL-GHVDILVSNDIAPVEWRPIDKYAVEDYRDMVEALQIKPFALANAV 115
Query: 141 HPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAP 200
              ++   +  I+ ++SA         + Y++ +   + LA  L+ E  + NI   ++AP
Sbjct: 116 ASQMKRRKSGHIIFITSAASFGPWKELSTYASARAGASALANALSKELGEHNIPVFAIAP 175
Query: 201 WYIRT---PF---TEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ 254
             + +   P+   +EP   + + V  V+  T + RLG  KE+  LV FL   +  Y+TGQ
Sbjct: 176 NGVDSGDSPYYYPSEPWKTSPEHVAWVRKYTALQRLGTQKELGELVTFLASGSCDYLTGQ 235
Query: 255 TVCIDGGFTV 264
              + GGF V
Sbjct: 236 VFWLAGGFPV 245

>pdb|3EDM|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Agrobacterium Tumefaciens Length = 259

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 88/188 (46%), Gaps = 7/188 (3%)
Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDF-SLVMSTNFESAF 134
            D+++  + +  I+  +  F G+++  V+  G  + + T+    E F   V+  N  S F
Sbjct: 65  ADLTNAAEVEAAISAAADKF-GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLF 123
Query: 135 HLCQLAHPLLRASGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEWAKDNI 193
              + A P +   GA  IV  SS  G      G + Y+ +KGA+    + LA E     I
Sbjct: 124 LTAKTALPKMAKGGA--IVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVGP-KI 180
Query: 194 RTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG 253
           R N+V P  I T F +      +  + V   T + R G  ++V+ LVAFL    A+Y+TG
Sbjct: 181 RVNAVCPGMISTTFHDTFT-KPEVRERVAGATSLKREGSSEDVAGLVAFLASDDAAYVTG 239
Query: 254 QTVCIDGG 261
               I+GG
Sbjct: 240 ACYDINGG 247

>pdb|1ZMO|A Chain A, Apo Structure Of Haloalcohol Dehalogenase Hhea Of Arthrobacter Sp. Ad2 Length = 244

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 111/251 (44%), Gaps = 19/251 (7%)
Query: 21  MTALVTGGTKGLGLAVVEELSMLGATV--HTCSRTETELNECIHHLQMKGLKVTGSVCDV 78
           + ALVT      G A VE L+  G TV  H  S  +    +          +  G++   
Sbjct: 2   VIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFES------ENPGTIALA 55
Query: 79  SSRPQRQTLINTVSSLFNGK-LNIFVNN--VGTSVLKPTLEYNAE-DFSLVMSTNFESAF 134
             +P+R  L++  ++L +G+ ++  V+N  +   + +  LE  +E D   +         
Sbjct: 56  EQKPER--LVD--ATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPI 111
Query: 135 HLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIR 194
            L Q A   LRA+G AS++ ++S++G        +Y   + A   L ++ A   ++D I 
Sbjct: 112 LLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSRDGIL 171
Query: 195 TNSVAPWYIRTPFTEPL---LGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI 251
             ++ P +   P   P      N +  + V    P+GRLG P E+ +L+ FL    A+ I
Sbjct: 172 LYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVPLGRLGRPDEMGALITFLASRRAAPI 231
Query: 252 TGQTVCIDGGF 262
            GQ     GG+
Sbjct: 232 VGQFFAFTGGY 242

>pdb|4H15|A Chain A, Crystal Structure Of A Short Chain Alcohol Dehydrogenase-Related Dehydrogenase (Target Id Nysgrc-011812) From Sinorhizobium Meliloti 1021 In Space Group P21 Length = 261

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 116/260 (44%), Gaps = 26/260 (10%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           +L+G  AL+T GTKG G A V     LGA V T +R   E       L ++    T   C
Sbjct: 8   NLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPE--GLPEELFVEADLTTKEGC 65
Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLE--YNAEDFSLVMSTNFESAF 134
            + +   RQ L         G +++ V+ +G S          + +D+   +S N  +A 
Sbjct: 66  AIVAEATRQRL---------GGVDVIVHXLGGSSAAGGGFSALSDDDWYNELSLNLFAAV 116
Query: 135 HLCQLAHPLLRASGAASIVLMSSALGIVS-ANVGTVYSATKGAMNQLAKNLACEWAKDNI 193
            L +   P   A G+  +V ++S   ++      T Y+A K A++  +K  + E +   +
Sbjct: 117 RLDRQLVPDXVARGSGVVVHVTSIQRVLPLPESTTAYAAAKAALSTYSKAXSKEVSPKGV 176
Query: 194 RTNSVAPWYIRTPFT------------EPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVA 241
           R   V+P +I T  +              L G  K + +     P+GR  +P+EV++L+A
Sbjct: 177 RVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIXDGLGGIPLGRPAKPEEVANLIA 236
Query: 242 FLCMPAASYITGQTVCIDGG 261
           FL    A+ ITG    IDGG
Sbjct: 237 FLASDRAASITGAEYTIDGG 256

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 108/250 (43%), Gaps = 20/250 (8%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           SL+    L+TG   GLG    +  +  GA V        +  + +  ++  G +      
Sbjct: 319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKV--VVNDFKDATKTVDEIKAAGGEAWPDQH 376
Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           DV+     + +I  V   + G ++I VNN G    +   + + +++  V   +    F+L
Sbjct: 377 DVAK--DSEAIIKNVIDKY-GTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNL 433
Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEWAKDNIRT 195
            +LA P         I+ ++S  GI   N G   YS++K  +  L+K +A E AK+NI+ 
Sbjct: 434 SRLAWPYFVEKQFGRIINITSTSGIY-GNFGQANYSSSKAGILGLSKTMAIEGAKNNIKV 492
Query: 196 NSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT 255
           N VAP +  T  T  ++           R     L    +V+ L+ +L       +TG+T
Sbjct: 493 NIVAP-HAETAMTLSIM-----------REQDKNLYHADQVAPLLVYLGTDDVP-VTGET 539
Query: 256 VCIDGGFTVN 265
             I GG+  N
Sbjct: 540 FEIGGGWIGN 549

>pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase ((+)-Trans-Carveol Dehydrogenase) From Mycobacterium Avium Length = 286

Iteration: 1
 Score = 61.2 bits (147), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 117/277 (42%), Gaps = 36/277 (12%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGA---TVHTC-------------SRTETELNECI 61
           ++G  A VTG  +G G +    L+  GA    V  C             + T  +L E  
Sbjct: 9   VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETA 68
Query: 62  HHLQMKGLKVTGSVCDVSSRPQRQTLINT-VSSLFNGKLNIFVNNVGTSVLKPTLEYNAE 120
             ++    ++  +  DV      +  +++ V  L  G+L+I V N G      TL+  +E
Sbjct: 69  DLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQL--GRLDIIVANAGIGNGGDTLDKTSE 126
Query: 121 -DFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGT-VYSATKGAMN 178
            D++ ++  N    +   +   P + A G    ++++S++G + A   T  Y A K  + 
Sbjct: 127 EDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGVV 186
Query: 179 QLAKNLACEWAKDNIRTNSVAPWYIRTPFTE---------PLLGNGKFVD-----EVKSR 224
            L +    E  +  IR NSV P +++TP            P L N    D     ++   
Sbjct: 187 GLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHT 246
Query: 225 TPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGG 261
            P+  + EP ++S+ V F     A YITG T+ ID G
Sbjct: 247 LPIPWV-EPIDISNAVLFFASDEARYITGVTLPIDAG 282

>pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat Peroxisomal Multifunctional Enzyme Type 2 Length = 319

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 84/193 (43%), Gaps = 15/193 (7%)
Query: 18  LQGMTALVTGGTKGLG----LAVVEELSM-----LGATVHTCSRTETELNECIHHLQMKG 68
             G   LVTG   GLG    LA  E  ++     LG       +  +  ++ +  ++ +G
Sbjct: 7   FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG 66
Query: 69  LKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMST 128
            K   +V +  S    + L+ T    F G++++ VNN G    +     + ED+ ++   
Sbjct: 67  GK---AVANYDSVEAGEKLVKTALDTF-GRIDVVVNNAGILRDRSFSRISDEDWDIIQRV 122
Query: 129 NFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACE 187
           +   +F + + A    +      I+  +SA GI   N G   YSA K  +  LA  L  E
Sbjct: 123 HLRGSFQVTRAAWDHXKKQNYGRIIXTASASGIY-GNFGQANYSAAKLGLLGLANTLVIE 181
Query: 188 WAKDNIRTNSVAP 200
             K+NI  N++AP
Sbjct: 182 GRKNNIHCNTIAP 194

>pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Reductase In Complex With Nadph And Pyroquilon Length = 274

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 109/260 (41%), Gaps = 22/260 (8%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATV----HTCSRTETELNECIHHLQMKGLKVTG 73
           L G  AL TG  +G+G  +  EL   GA+V     + S+   E+   +  L  +G+ +  
Sbjct: 19  LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQ- 77
Query: 74  SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESA 133
              D+S   +   L +   S F G L+  ++N G  V    LE   E F  V + N    
Sbjct: 78  --ADISKPSEVVALFDKAVSHFGG-LDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQ 134
Query: 134 FHLCQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAKDN 192
           F + Q      R  G   I+L SS   +++      +Y+ +K A+    +  A +     
Sbjct: 135 FFVAQQGLKHCRRGG--RIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKG 192
Query: 193 IRTNSVAPWYIRT-----------PFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVA 241
           +  N +AP  ++T           P     +   K  + + +  P+ R+G P ++   V+
Sbjct: 193 VTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVS 252
Query: 242 FLCMPAASYITGQTVCIDGG 261
            LC   + +I GQ + + GG
Sbjct: 253 ALCQEESEWINGQVIKLTGG 272

>pdb|4DA9|A Chain A, Crystal Structure Of Putative Short-Chain DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 9/212 (4%)
Query: 60  CIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTS--VLKPTLEY 117
            I  L   G +V     D++     Q  ++ V + F G+++  VNN G +  V    L+ 
Sbjct: 70  VIAELSGLGARVIFLRADLADLSSHQATVDAVVAEF-GRIDCLVNNAGIASIVRDDFLDL 128
Query: 118 NAEDFSLVMSTNFESAFHLCQLAHPLLRASGAA---SIVLMSSALGIVSANVGTVYSATK 174
             E+F  ++  N        Q       AS A    SI+ ++S   + ++     Y  +K
Sbjct: 129 KPENFDTIVGVNLRGTVFFTQAVLKAXLASDARASRSIINITSVSAVXTSPERLDYCXSK 188
Query: 175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSR-TPMGRLGEP 233
             +   ++ LA   A+  I    V P  IR+  T  +  +GK+   ++S   P  R GEP
Sbjct: 189 AGLAAFSQGLALRLAETGIAVFEVRPGIIRSDXTAAV--SGKYDGLIESGLVPXRRWGEP 246
Query: 234 KEVSSLVAFLCMPAASYITGQTVCIDGGFTVN 265
           +++ ++VA L      + TG  +  DGG ++ 
Sbjct: 247 EDIGNIVAGLAGGQFGFATGSVIQADGGLSIG 278

>pdb|1P33|A Chain A, Pteridine Reductase From Leishmania Tarentolae Complex With Nadph And Mtx Length = 289

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 120/281 (42%), Gaps = 43/281 (15%)
Query: 23  ALVTGGTKGLGLAVVEELSMLGATV----HTCSRTETELNECIHHLQM-KGLKVTGSVCD 77
           ALVTG  K LG ++ E L   G TV    H  +   + L   ++  +    + V   + +
Sbjct: 10  ALVTGAAKRLGSSIAEALHAEGYTVCLHYHRSAADASTLAATLNARRPNSAITVQADLSN 69
Query: 78  VSSRPQRQT-------LINTVSSLFN------GKLNIFVNNV----------------GT 108
           V++    +T       L +  S+L +      G+ ++ VNN                 G+
Sbjct: 70  VATASFSETDGSVPVTLFSRCSALVDACYMHWGRCDVLVNNASSFYPTPLLRKDAGEGGS 129
Query: 109 SV-LKPTLEYNAEDF--SLVMSTNFESAFHLCQLAHPLLRASGAA-SIVLMSSALGIVSA 164
           SV  K +LE  A D   S  ++  F       ++A       G + SIV M  A+     
Sbjct: 130 SVGDKESLEVAAADLFGSNAIAPYFLIKAFAQRVADTRAEQRGTSYSIVNMVDAMTSQPL 189
Query: 165 NVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSR 224
              T+Y+  K A+  L ++ A E A   IR N V+P     P   P        ++ + +
Sbjct: 190 LGYTMYTMAKEALEGLTRSAALELASLQIRVNGVSPGLSVLPDDMPF----SVQEDYRRK 245
Query: 225 TPM-GRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTV 264
            P+  R    +EVS +V FLC P A YITG  + +DGG+++
Sbjct: 246 VPLYQRNSSAEEVSDVVIFLCSPKAKYITGTCIKVDGGYSL 286

>pdb|3OIF|A Chain A, Crystal Structure Of Enoyl-Acp Reductases I (Fabi) From B. Subtilis (Complex With Nad And Tcl) Length = 266

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 71/150 (47%), Gaps = 2/150 (1%)
Query: 115 LEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK 174
           L  N + F L  + +  S   + + A P++   G  SIV ++   G +      V    K
Sbjct: 108 LNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGG--SIVTLTYLGGELVMPNYNVMGVAK 165
Query: 175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPK 234
            +++   K LA +  K+NIR NS++   IRT   + +      + +++ R P+ R   P+
Sbjct: 166 ASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPLRRTTTPE 225
Query: 235 EVSSLVAFLCMPAASYITGQTVCIDGGFTV 264
           EV    AFL    +  ITG+ + +D GF +
Sbjct: 226 EVGDTAAFLFSDMSRGITGENLHVDSGFHI 255

>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 16/212 (7%)
Query: 9   SHSRQNRWS---LQGMTALVTGGTKGLGLAVVEELSMLGAT------VHTCSRTET--EL 57
           SH  Q R +   L   T L+TG + G+G A    L  L A+      +    R E   EL
Sbjct: 19  SHMSQGRKAAERLAKKTVLITGASAGIGKATA--LEYLEASNGDMKLILAARRLEKLEEL 76
Query: 58  NECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTL-E 116
            + I   +    KV  +  D++   + +  I  +   F   ++I VNN G ++    + +
Sbjct: 77  KKTIDQ-EFPNAKVHVAQLDITQAEKIKPFIENLPQEFK-DIDILVNNAGKALGSDRVGQ 134
Query: 117 YNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGA 176
              ED   V  TN  +  ++ Q   P+ +A  +  IV + S  G  +   G++Y A+K A
Sbjct: 135 IATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFA 194
Query: 177 MNQLAKNLACEWAKDNIRTNSVAPWYIRTPFT 208
           +     +L  E     IR   +AP  + T F+
Sbjct: 195 VGAFTDSLRKELINTKIRVILIAPGLVETEFS 226

>pdb|1E92|A Chain A, Pteridine Reductase 1 From Leishmania Major Complexed With Nadp+ And Dihydrobiopterin Length = 288

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 109/285 (38%), Gaps = 51/285 (17%)
Query: 23  ALVTGGTKGLGLAVVEELSMLGATVHTC---SRTETELNECIHHLQMK----GLKVTGSV 75
           ALVTG  K LG ++ E L   G  V  C    R+  E N     L  +     + V   +
Sbjct: 9   ALVTGAAKRLGRSIAEGLHAEGYAV--CLHYHRSAAEANALSATLNARRPNSAITVQADL 66
Query: 76  CDVSSRPQRQTLINTVSSLFN-------------GKLNIFVNNVGTSVLKPTLEYNAED- 121
            +V++ P      +   +LF              G+ ++ VNN  +    P L  N ED 
Sbjct: 67  SNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLR-NDEDG 125
Query: 122 ---------------FSLVMSTNFESAFHLCQLAH-----PLLRASGAASIVLMSSALGI 161
                            L  S      F +   AH     P        SI+ M  A+  
Sbjct: 126 HEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTN 185
Query: 162 VSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAP-WYIRTPFTEPLLGNGKFVDE 220
                 T+Y+  KGA+  L ++ A E A   IR N V P   +      P +  G     
Sbjct: 186 QPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAVWEGH---- 241
Query: 221 VKSRTPM-GRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTV 264
            +S+ P+  R     EVS +V FLC   A YITG  V +DGG+++
Sbjct: 242 -RSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL 285

>pdb|1E7W|A Chain A, One Active Site, Two Modes Of Reduction Correlate The Mechanism Of Leishmania Pteridine Reductase With Pterin Metabolism And Antifolate Drug Resistance In Trpanosomes Length = 291

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 109/285 (38%), Gaps = 51/285 (17%)
Query: 23  ALVTGGTKGLGLAVVEELSMLGATVHTC---SRTETELNECIHHLQMK----GLKVTGSV 75
           ALVTG  K LG ++ E L   G  V  C    R+  E N     L  +     + V   +
Sbjct: 12  ALVTGAAKRLGRSIAEGLHAEGYAV--CLHYHRSAAEANALSATLNARRPNSAITVQADL 69
Query: 76  CDVSSRPQRQTLINTVSSLFN-------------GKLNIFVNNVGTSVLKPTLEYNAED- 121
            +V++ P      +   +LF              G+ ++ VNN  +    P L  N ED 
Sbjct: 70  SNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLR-NDEDG 128
Query: 122 ---------------FSLVMSTNFESAFHLCQLAH-----PLLRASGAASIVLMSSALGI 161
                            L  S      F +   AH     P        SI+ M  A+  
Sbjct: 129 HEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTN 188
Query: 162 VSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAP-WYIRTPFTEPLLGNGKFVDE 220
                 T+Y+  KGA+  L ++ A E A   IR N V P   +      P +  G     
Sbjct: 189 QPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAVWEGH---- 244
Query: 221 VKSRTPM-GRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTV 264
            +S+ P+  R     EVS +V FLC   A YITG  V +DGG+++
Sbjct: 245 -RSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL 288

>pdb|2QHX|A Chain A, Structure Of Pteridine Reductase From Leishmania Major Complexed With A Ligand Length = 328

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 109/285 (38%), Gaps = 51/285 (17%)
Query: 23  ALVTGGTKGLGLAVVEELSMLGATVHTC---SRTETELNECIHHLQMK----GLKVTGSV 75
           ALVTG  K LG ++ E L   G  V  C    R+  E N     L  +     + V   +
Sbjct: 49  ALVTGAAKRLGRSIAEGLHAEGYAV--CLHYHRSAAEANALSATLNARRPNSAITVQADL 106
Query: 76  CDVSSRPQRQTLINTVSSLFN-------------GKLNIFVNNVGTSVLKPTLEYNAED- 121
            +V++ P      +   +LF              G+ ++ VNN  +    P L  N ED 
Sbjct: 107 SNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLR-NDEDG 165
Query: 122 ---------------FSLVMSTNFESAFHLCQLAH-----PLLRASGAASIVLMSSALGI 161
                            L  S      F +   AH     P        SI+ M  A+  
Sbjct: 166 HEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTN 225
Query: 162 VSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWY-IRTPFTEPLLGNGKFVDE 220
                 T+Y+  KGA+  L ++ A E A   IR N V P   +      P +  G     
Sbjct: 226 QPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAVWEGH---- 281
Query: 221 VKSRTPM-GRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTV 264
            +S+ P+  R     EVS +V FLC   A YITG  V +DGG+++
Sbjct: 282 -RSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL 325

>pdb|1W0C|A Chain A, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1) By 2,4,6-Triaminoquinazoline; Structure Of The Nadp Ternary Complex. Length = 307

Iteration: 1
 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 109/285 (38%), Gaps = 51/285 (17%)
Query: 23  ALVTGGTKGLGLAVVEELSMLGATVHTC---SRTETELNECIHHLQMK----GLKVTGSV 75
           ALVTG  K LG ++ E L   G  V  C    R+  E N     L  +     + V   +
Sbjct: 28  ALVTGAAKRLGRSIAEGLHAEGYAV--CLHYHRSAAEANALSATLNARRPNSAITVQADL 85
Query: 76  CDVSSRPQRQTLINTVSSLFN-------------GKLNIFVNNVGTSVLKPTLEYNAED- 121
            +V++ P      +   +LF              G+ ++ VNN  +    P L  N ED 
Sbjct: 86  SNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLR-NDEDG 144
Query: 122 ---------------FSLVMSTNFESAFHLCQLAH-----PLLRASGAASIVLMSSALGI 161
                            L  S      F +   AH     P        SI+ M  A+  
Sbjct: 145 HEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTN 204
Query: 162 VSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAP-WYIRTPFTEPLLGNGKFVDE 220
                 T+Y+  KGA+  L ++ A E A   IR N V P   +      P +  G     
Sbjct: 205 QPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAVWEGH---- 260
Query: 221 VKSRTPM-GRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTV 264
            +S+ P+  R     EVS +V FLC   A YITG  V +DGG+++
Sbjct: 261 -RSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL 304

>pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 264

Iteration: 1
 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 59/248 (23%), Positives = 101/248 (40%), Gaps = 12/248 (4%)
Query: 24  LVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQ 83
           +++G    LG  +    +  GA +   +RT   L +    +   G +      D++   Q
Sbjct: 15  VISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQ 74
Query: 84  RQTLINTVSSLFNGKLNIFVNNV-GTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHP 142
              L++     + G++++ +NN      +KP      E     +      A  L Q   P
Sbjct: 75  VAHLVDETMKAY-GRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTP 133
Query: 143 LLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWY 202
            L  S  A + + S  +    A  G  Y   K A+  +++ LA E  +  IR NSV P Y
Sbjct: 134 ALEESKGAVVNVNSMVVRHSQAKYGA-YKMAKSALLAMSQTLATELGEKGIRVNSVLPGY 192
Query: 203 I-----RTPFTEPLLGNGKFVDEVKSRTPMG----RLGEPKEVSSLVAFLCMPAASYITG 253
           I     ++ F       G  V+++ +    G    RL    EV+S + F+    AS ITG
Sbjct: 193 IWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAILFMASDLASGITG 252
Query: 254 QTVCIDGG 261
           Q + ++ G
Sbjct: 253 QALDVNCG 260

>pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 244

Iteration: 1
 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 52/225 (23%), Positives = 89/225 (39%), Gaps = 21/225 (9%)
Query: 24  LVTGGTKGLGLAVVEELSMLGATVHT--------CSRTETELNECIHHLQMKGLKVTGSV 75
           L+TG  KG+G A+  E +   A  H          SRT  +L +     + +G       
Sbjct: 6   LITGAGKGIGRAIALEFAR-AARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTIT 64
Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
            D+S     + L   +   + G ++  VNN G        +   EDF   M+TN +  F 
Sbjct: 65  ADISDMADVRRLTTHIVERY-GHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFF 123
Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRT 195
           L Q    L+    +  I  ++S     +    ++Y  +K     L + +     K N+R 
Sbjct: 124 LTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVRI 183
Query: 196 NSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLV 240
             V P  + TP        GK  DE+++   M     P+++++ V
Sbjct: 184 TDVQPGAVYTPMW------GKVDDEMQALMMM-----PEDIAAPV 217

>pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa Length = 272

Iteration: 1
 Score = 57.8 bits (138), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 76/189 (40%), Gaps = 4/189 (2%)
Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
           T  +TG T G G A     +  G ++    R E  L      L  K  +V     DV  R
Sbjct: 23  TLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK-TRVLPLTLDVRDR 81
Query: 82  PQRQTLINTVSSLFNGKLNIFVNNVGTSV-LKPTLEYNAEDFSLVMSTNFESAFHLCQLA 140
                 ++ +   F   L   +NN G ++   P    + +D+   + TN +   +  +L 
Sbjct: 82  AAXSAAVDNLPEEF-ATLRGLINNAGLALGTDPAQSCDLDDWDTXVDTNIKGLLYSTRLL 140
Query: 141 HPLLRASGA-ASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVA 199
            P L A GA ASIV + S  G        VY  TK  + Q + NL C+     +R  ++ 
Sbjct: 141 LPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLE 200
Query: 200 PWYIRTPFT 208
           P    + F+
Sbjct: 201 PGLCESEFS 209

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/184 (21%), Positives = 74/184 (40%), Gaps = 3/184 (1%)
Query: 24  LVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQ 83
           L+TG + G+G  +  EL + GA +   +R +  +      ++  G      V DV+ R  
Sbjct: 8   LITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHS 67
Query: 84  RQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPL 143
                      + G++++ VNN G   L P      +++  ++  N +          P+
Sbjct: 68  VAAFAQAAVDTW-GRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPI 126
Query: 144 LRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYI 203
           + A  +  I+ + S   +       VY ATK A+  ++  L  E    NIR   V P  +
Sbjct: 127 MEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQE--STNIRVTCVNPGVV 184
Query: 204 RTPF 207
            +  
Sbjct: 185 ESEL 188

>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 89/197 (45%), Gaps = 9/197 (4%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK--GLKVTGS 74
              G TA VTGG  G+G+ +V +L   G  V      +  +++ +  L+ +  G +V G 
Sbjct: 5   DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGV 64
Query: 75  VCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAF 134
             DV+SR   +   + V + F G ++I  NN G ++ +P  E + +D+  ++  N     
Sbjct: 65  QLDVASREGFKMAADEVEARF-GPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVV 123
Query: 135 HLCQLAHPLLRASGAAS------IVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEW 188
           +      P +     A       +V  +S    ++A    +Y+ TK A+  L+++L    
Sbjct: 124 NGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESLHYSL 183
Query: 189 AKDNIRTNSVAPWYIRT 205
            K  I  + + P  +++
Sbjct: 184 LKYEIGVSVLCPGLVKS 200

>pdb|2XOX|A Chain A, Crystal Structure Of Pteridine Reductase (Ptr1) From Leishmania Donovani Length = 288

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 105/283 (37%), Gaps = 47/283 (16%)
Query: 23  ALVTGGTKGLGLAVVEELSMLGATVHTC---SRTETELNECIHHLQMK----GLKVTGSV 75
           ALVTG  K LG  + E L   G  V  C    R+  E N     L  +     + V   +
Sbjct: 9   ALVTGAAKRLGSGIAEGLHAEGYAV--CLHYHRSAAEANTLAATLNARRPNSAIPVQADL 66
Query: 76  CDVSSRPQRQTLINTVSSLFN-------------GKLNIFVNNVGTSVLKPTLEYN---- 118
            +V+  P          +LF              G+ ++ VNN  +    P L  +    
Sbjct: 67  SNVAKAPAGGADGAAPVTLFKRCADLVAACYTHWGRCDVLVNNASSFYPTPLLRKDEDGH 126
Query: 119 -----------AEDFSLVMSTNFESAFHLCQLAH-----PLLRASGAASIVLMSSALGIV 162
                      A    L  S      F +   AH     P  +     SIV M  A+   
Sbjct: 127 VPCVGDREAMEAAAADLFGSNAMAPYFLIKAFAHRVADTPAEQRGTNYSIVNMVDAMTSQ 186
Query: 163 SANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVK 222
                T+Y+  KGA+  L ++ A E A   IR N V P         P        ++ +
Sbjct: 187 PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLADDMP----PAVREDYR 242
Query: 223 SRTPM-GRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTV 264
           S+ P+  R     EVS +V FLC   A Y+TG  V +DGG+++
Sbjct: 243 SKVPLYQRDSSAAEVSDVVIFLCSSKAKYVTGTCVKVDGGYSL 285

>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 80/182 (43%), Gaps = 4/182 (2%)
Query: 24  LVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQ 83
           LVTG + G G A+ E     G TV   +R    L++ +     +   ++  V D     +
Sbjct: 9   LVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTD----GE 64
Query: 84  RQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPL 143
           R  ++        G++++ VNN G + +    E    +   +   +      L +   P 
Sbjct: 65  RIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQ 124
Query: 144 LRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYI 203
            R  G+ S+V +SS  G +S    + YSATK A+ QL++ LA E A   I+   V P   
Sbjct: 125 XRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAF 184
Query: 204 RT 205
           RT
Sbjct: 185 RT 186

>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248

Iteration: 1
 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 78/181 (43%), Gaps = 5/181 (2%)
Query: 21  MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSS 80
           M  LVTG T G G  +       G  V    R +  L E    L   G  +  +  DV +
Sbjct: 1   MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL---GDNLYIAQLDVRN 57
Query: 81  RPQRQTLINTVSSLFNGKLNIFVNNVGTSV-LKPTLEYNAEDFSLVMSTNFESAFHLCQL 139
           R   + ++ ++ + +   ++I VNN G ++ ++P  + + ED+  ++ TN +   ++ + 
Sbjct: 58  RAAIEEMLASLPAEW-CNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRA 116
Query: 140 AHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVA 199
             P +       I+ + S  G      G VY ATK  + Q + NL  +     +R   + 
Sbjct: 117 VLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIE 176
Query: 200 P 200
           P
Sbjct: 177 P 177

>pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1 Length = 260

Iteration: 1
 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 79/195 (40%), Gaps = 8/195 (4%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           + G   +VTG ++G+G  +  +L   GATV+   R    L       Q  G +    VCD
Sbjct: 3   MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCD 62
Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVL-------KPTLEYNAEDFSLVMSTNF 130
            S   + ++L   V     G+L++ VNN    V        K   E  A  +  + +   
Sbjct: 63  SSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGL 122
Query: 131 ESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAK 190
              +        L+  +G   IV++SS  G +       Y   K A ++LA + A E  +
Sbjct: 123 RGHYFCSVYGARLMVPAGQGLIVVISSP-GSLQYMFNVPYGVGKAACDKLAADCAHELRR 181
Query: 191 DNIRTNSVAPWYIRT 205
             +   S+ P  ++T
Sbjct: 182 HGVSCVSLWPGIVQT 196

>pdb|4FS3|A Chain A, Crystal Structure Of Staphylococcus Aureus Enoyl-Acp Reductase In Complex With Nadp And Afn-1252 Length = 256

Iteration: 1
 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 47/94 (50%)
Query: 169 VYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMG 228
           V    K ++    K LA +   DNIR N+++   IRT   + + G    + E+K R P+ 
Sbjct: 159 VMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLK 218
Query: 229 RLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGF 262
           R  +  EV    A+L    +S +TG+ + +D GF
Sbjct: 219 RNVDQVEVGKTAAYLLSDLSSGVTGENIHVDSGF 252

>pdb|1WMA|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Hydroxy-pp Length = 276

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 67/143 (46%), Gaps = 10/143 (6%)
Query: 23  ALVTGGTKGLGLAVVEEL-SMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
           ALVTGG KG+GLA+V +L  +    V   +R  T     +  LQ +GL       D+   
Sbjct: 7   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDL 66
Query: 82  PQRQTLINTVSSLFNGKLNIFVNNVGTS--VLKPT-LEYNAEDFSLVMSTNFESAFHLCQ 138
              + L + +   + G L++ VNN G +  V  PT     AE   + M TNF     +C 
Sbjct: 67  QSIRALRDFLRKEYGG-LDVLVNNAGIAFKVADPTPFHIQAE---VTMKTNFFGTRDVCT 122
Query: 139 LAHPLLRASGAASIVLMSSALGI 161
              PL++  G   +V +SS + +
Sbjct: 123 ELLPLIKPQG--RVVNVSSIMSV 143

>pdb|3PXX|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nicotinamide Adenine Dinucleotide Length = 287

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 108/281 (38%), Gaps = 43/281 (15%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATV---HTCSRTET---------ELNECIHHLQ 65
           +Q    LVTGG +G G +   +L+  GA +     C   ET         +L E    ++
Sbjct: 8   VQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVE 67
Query: 66  MKGLKVTGSVCDVSSRPQ-RQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSL 124
             G K   +  DV  R    + L N V+    GKL++ V N G   L   L   A  F+ 
Sbjct: 68  KTGRKAYTAEVDVRDRAAVSRELANAVAEF--GKLDVVVANAGICPLGAHLPVQA--FAD 123
Query: 125 VMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTV-----------YSAT 173
               +F    +    A P L  +  ASI+   S  G+++A                YS  
Sbjct: 124 AFDVDFVGVINTVHAALPYL--TSGASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYA 181
Query: 174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPF--TEPLLGNGKFVDEVKSRTP----- 226
           K  ++     LA + A  +IR N + P  + T    + P+    +   E  SR       
Sbjct: 182 KQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAF 241
Query: 227 --MGRLGEP----KEVSSLVAFLCMPAASYITGQTVCIDGG 261
             M  +  P     ++S+ V FL    + Y+TG    +D G
Sbjct: 242 PAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAG 282

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 16/201 (7%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNEC--IHHLQMKGLKVTGSV 75
           + G  ALVTG  +G+G A  E L + GA V           +C    H Q +  K     
Sbjct: 5   VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQ 64
Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
           CDV+ + Q +     V   F G+L+I VNN G +        N +++   +  N  S   
Sbjct: 65  CDVADQQQLRDTFRKVVDHF-GRLDILVNNAGVN--------NEKNWEKTLQINLVSVIS 115
Query: 136 LCQLAHPLL--RASGAASIVL-MSSALGIVSANVGTVYSATKGAMNQLAKN--LACEWAK 190
              L    +  +  G   I++ MSS  G++      VY A+K  +    ++  LA     
Sbjct: 116 GTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMN 175
Query: 191 DNIRTNSVAPWYIRTPFTEPL 211
             +R N++ P ++ T   E +
Sbjct: 176 SGVRLNAICPGFVNTAILESI 196

>pdb|3TPC|A Chain A, Crystal Structure Of A Hypothtical Protein Sma1452 From Sinorhizobium Meliloti 1021 Length = 257

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 107/249 (42%), Gaps = 21/249 (8%)
Query: 24  LVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQ 83
           +VTG + GLG AV   L+  GATV           E    L   G  V     DV++   
Sbjct: 11  IVTGASSGLGAAVTRXLAQEGATVLGLDLKPPAGEEPAAEL---GAAVRFRNADVTNEAD 67
Query: 84  RQTLINTVSSLFNGKLNIFVNNVGTS----VLKPTLEYNAEDFSLVMSTNFESAFHLCQL 139
               +      F G ++  VN  GT+    +L  +  +  + F+  ++ N    F+  +L
Sbjct: 68  ATAALAFAKQEF-GHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNXIRL 126
Query: 140 AHPLL-----RASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAKDNI 193
           A  +       A G   +++ ++++      +G   Y+A+KG +  L    A E A+  I
Sbjct: 127 AAEVXSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPAARELARFGI 186
Query: 194 RTNSVAPWYIRTPFTEPLLGNGKFV-DEVKSRTPM-GRLGEPKEVSSLVAFLCMPAASYI 251
           R  ++AP    TP      G  + V D + +  P   RLG  +E ++LV  +C    + +
Sbjct: 187 RVVTIAPGIFDTPXXA---GXPQDVQDALAASVPFPPRLGRAEEYAALVKHICE--NTXL 241
Query: 252 TGQTVCIDG 260
            G+ + +DG
Sbjct: 242 NGEVIRLDG 250

>pdb|4ALL|A Chain A, Crystal Structure Of S. Aureus Fabi In Complex With Nadp And Triclosan (P212121) Length = 277

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 47/94 (50%)
Query: 169 VYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMG 228
           V    K ++    K LA +   DNIR N+++   IRT   + + G    + E++ R P+ 
Sbjct: 180 VMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIEERAPLK 239
Query: 229 RLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGF 262
           R  +  EV    A+L    +S +TG+ + +D GF
Sbjct: 240 RNVDQVEVGKTAAYLLSDLSSGVTGENIHVDSGF 273

>pdb|3GNS|A Chain A, Crystal Structure Of The Staphylococcus Aureus Enoyl-Acyl Carrier Protein Reductase (Fabi) In Apo Form (One Molecule In Au) Length = 260

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 47/94 (50%)
Query: 169 VYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMG 228
           V    K ++    K LA +   DNIR N+++   IRT   + + G    + E++ R P+ 
Sbjct: 163 VMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIEERAPLK 222
Query: 229 RLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGF 262
           R  +  EV    A+L    +S +TG+ + +D GF
Sbjct: 223 RNVDQVEVGKTAAYLLSDLSSGVTGENIHVDSGF 256

>pdb|3GNT|A Chain A, Crystal Structure Of The Staphylococcus Aureus Enoyl-Acyl Carrier Protein Reductase (Fabi) In Apo Form (Two Molecules In Au) Length = 256

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 47/94 (50%)
Query: 169 VYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMG 228
           V    K ++    K LA +   DNIR N+++   IRT   + + G    + E++ R P+ 
Sbjct: 159 VMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIEERAPLK 218
Query: 229 RLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGF 262
           R  +  EV    A+L    +S +TG+ + +D GF
Sbjct: 219 RNVDQVEVGKTAAYLLSDLSSGVTGENIHVDSGF 252

>pdb|3TL3|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 257

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 105/267 (39%), Gaps = 39/267 (14%)
Query: 16  WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCS-RTETELNECIHHLQMKGLKVTGS 74
             ++   A+VTGG  GLGLA  + L   GA V     R E  + +     +     VT  
Sbjct: 5   MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADLGDRARFAAADVTDE 64
Query: 75  VCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTS----VLKPTLEYNAEDFSLVMSTNF 130
               S+    +T+         G L I VN  GT     VL     ++   F  ++  N 
Sbjct: 65  AAVASALDLAETM---------GTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINL 115
Query: 131 ESAFHLCQLA-------HPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAK 182
             +F++ +LA        P+   +    +++ ++++      +G   YSA+KG +  +  
Sbjct: 116 VGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTL 175
Query: 183 NLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMG-------RLGEPKE 235
            +A + A   IR  ++AP    TP    L          ++R  +G       RLG P E
Sbjct: 176 PIARDLASHRIRVMTIAPGLFDTPLLASL--------PEEARASLGKQVPHPSRLGNPDE 227
Query: 236 VSSLVAFLCMPAASYITGQTVCIDGGF 262
             +L   +       + G+ + +DG  
Sbjct: 228 YGALAVHII--ENPMLNGEVIRLDGAI 252

>pdb|4ALI|A Chain A, Crystal Structure Of S. Aureus Fabi In Complex With Nadp And Triclosan (P1) Length = 282

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 5/134 (3%)
Query: 132 SAFHLCQLAH---PLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEW 188
           S++ L  +AH    L+   G  SIV  +   G  +     V    K ++    K LA + 
Sbjct: 147 SSYSLTIVAHEAKKLMPEGG--SIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDL 204
Query: 189 AKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAA 248
             DNIR N+++   IRT   + + G    + E++ R P+ R  +  EV    A+L    +
Sbjct: 205 GPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIEERAPLKRNVDQVEVGKTAAYLLSDLS 264
Query: 249 SYITGQTVCIDGGF 262
           S +TG+ + +D GF
Sbjct: 265 SGVTGENIHVDSGF 278

>pdb|2P91|A Chain A, Crystal Structure Of Enoyl-[acyl-Carrier-Protein] Reductase (Nadh) From Aquifex Aeolicus Vf5 Length = 285

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 60/264 (22%), Positives = 103/264 (39%), Gaps = 23/264 (8%)
Query: 18  LQGMTALVTG--GTKGLGLAVVEELSMLGATV---HTCSRTETELNECIHHLQMKGLKVT 72
           L+G  AL+TG    + +   + +     GA +   +   + E  + E       KG    
Sbjct: 19  LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREI-----AKGFGSD 73
Query: 73  GSV-CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNA-------EDFSL 124
             V CDVS     + L   +   + G L+I V+++  +   P  E+         E F +
Sbjct: 74  LVVKCDVSLDEDIKNLKKFLEENW-GSLDIIVHSIAYA---PKEEFKGGVIDTSREGFKI 129
Query: 125 VMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNL 184
            M  +  S   L +   PL+     A + L       V  +   V    K A+    + L
Sbjct: 130 AMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVPHY-NVMGIAKAALESTVRYL 188
Query: 185 ACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLC 244
           A + AK   R N+++   ++T     + G    ++      P G+    ++V     FLC
Sbjct: 189 AYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPFGKPITIEDVGDTAVFLC 248
Query: 245 MPAASYITGQTVCIDGGFTVNGFF 268
              A  ITG+ V +D G+ + G F
Sbjct: 249 SDWARAITGEVVHVDNGYHIMGVF 272

>pdb|3E03|A Chain A, Crystal Structure Of A Putative Dehydrogenase From Xanthomonas Campestris Length = 274

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/219 (23%), Positives = 85/219 (38%), Gaps = 13/219 (5%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTET---ELNECIHHLQMKGLKVTG 73
           +L G T  +TG ++G+GLA+    +  GA V   +++     +L   IH          G
Sbjct: 3   TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGG 62
Query: 74  S----VCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTN 129
                 CD+    Q +  +      F G ++I VNN     L+ TL+   + F L    N
Sbjct: 63  QGLALKCDIREEDQVRAAVAATVDTFGG-IDILVNNASAIWLRGTLDTPXKRFDLXQQVN 121
Query: 130 FESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG--TVYSATKGAMNQLAKNLACE 187
              +F   Q   P L  +    I+ ++    +  A  G  T Y+  K   + +   LA E
Sbjct: 122 ARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKXGXSLVTLGLAAE 181
Query: 188 WAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTP 226
           +    +  N++ P   RT      +     VD    R P
Sbjct: 182 FGPQGVAINALWP---RTVIATDAINXLPGVDAAACRRP 217

>pdb|3KZV|A Chain A, The Crystal Structure Of A Cytoplasmic Protein With Unknown Function From Saccharomyces Cerevisiae Length = 254

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 88/191 (46%), Gaps = 14/191 (7%)
Query: 20  GMTALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           G   LVTG ++G+G ++V+ L  L     V+  +R+E  L +       +   V G + +
Sbjct: 2   GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITE 61
Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAED---FSLVMSTNFESAF 134
            S   Q   L+N      +GK++  V N G  VL+P    N  D   +  +   NF S  
Sbjct: 62  DSVLKQ---LVNAAVK-GHGKIDSLVANAG--VLEPVQNVNEIDVNAWKKLYDINFFSIV 115
Query: 135 HLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIR 194
            L  +A P L+ +    + + S A  +  ++ G  Y ++K A+N  A  LA E  +  ++
Sbjct: 116 SLVGIALPELKKTNGNVVFVSSDACNMYFSSWGA-YGSSKAALNHFAMTLANE--ERQVK 172
Query: 195 TNSVAPWYIRT 205
             +VAP  + T
Sbjct: 173 AIAVAPGIVDT 183

>pdb|3G1T|A Chain A, Crystal Structure Of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 Length = 258

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 90/194 (46%), Gaps = 9/194 (4%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHL----QMKGLKVTG 73
           LQ    LVTG + G+G       +  GATV    R E +L     H+     ++    T 
Sbjct: 12  LQNRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIADEQHVQPQWFTL 71
Query: 74  SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVG-TSVLKPTLEYNAEDFSLVMSTNFES 132
            +   ++   RQ + + +++ +  +L+  ++N G    + P  E + + +  VM  N  +
Sbjct: 72  DLLTCTAEECRQ-VADRIAAHYP-RLDGVLHNAGLLGEIGPMSEQDPQIWQDVMQVNVNA 129
Query: 133 AFHLCQLAHPLLRASGAASIVLMSSALGIV-SANVGTVYSATKGAMNQLAKNLACEWAKD 191
            F L Q   PLL  S A S+V  SS++G    AN G  Y+ +K A   + + LA E+   
Sbjct: 130 TFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWG-AYATSKFATEGMMQVLADEYQNR 188
Query: 192 NIRTNSVAPWYIRT 205
           ++R N + P   RT
Sbjct: 189 SLRVNCINPGGTRT 202

>pdb|1MXF|A Chain A, Crystal Structure Of Inhibitor Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276

Iteration: 1
 Score = 51.2 bits (121), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 169 VYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMG 228
           VY+  K A+  L +  A E A  +IR N+VAP     P   P     +  +E + + P+G
Sbjct: 181 VYTXAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAXPQ----ETQEEYRRKVPLG 236
Query: 229 R-LGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTV 264
           +      +++  +AFL    A YITG T+ +DGG  +
Sbjct: 237 QSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLIL 273

>pdb|4BB6|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 85/179 (47%), Gaps = 15/179 (8%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLK----VTG 73
           LQG   +VTG +KG+G  +   L+ +GA V   +R++  L + + H    G      + G
Sbjct: 32  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 91
Query: 74  SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLV---MSTNF 130
           ++ D++   Q    +     L  G   + +N++  +    +L    +D   V   M  NF
Sbjct: 92  TMEDMTFAEQ---FVAQAGKLMGGLDMLILNHITNT----SLNLFHDDIHHVRKSMEVNF 144
Query: 131 ESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWA 189
            S   L   A P+L+ S   SIV++SS  G V+  +   YSA+K A++    ++  E++
Sbjct: 145 LSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPLVAAYSASKFALDGFFSSIRKEYS 202

>pdb|3BMC|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 112/270 (41%), Gaps = 28/270 (10%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC- 76
           ++   A+VTG  K +G A+  +L   G  V        E    +     K    T  VC 
Sbjct: 21  MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQ 80
Query: 77  -DVSSR---PQR-QTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFS--LVMSTN 129
            D+++    P   + +IN+    F G+ ++ VNN       P ++ + ED S    + T 
Sbjct: 81  ADLTNSNVLPASCEEIINSCFRAF-GRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQ 139
Query: 130 FESAFHLCQLAHPLLRASGAA--------------SIVLMSSALGIVSANVGTVYSATKG 175
                    +A  LL  S A               SIV +  A+        ++Y+  K 
Sbjct: 140 VAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYNMGKH 199
Query: 176 AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRL-GEPK 234
           A+  L ++ A E A   IR N VAP     P     +G  +  D+ + + P+GR     +
Sbjct: 200 ALVGLTQSAALELAPYGIRVNGVAPGVSLLPVA---MGEEE-KDKWRRKVPLGRREASAE 255
Query: 235 EVSSLVAFLCMPAASYITGQTVCIDGGFTV 264
           +++  V FL   +A YITG  + +DGG ++
Sbjct: 256 QIADAVIFLVSGSAQYITGSIIKVDGGLSL 285

>pdb|4BB5|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 85/179 (47%), Gaps = 15/179 (8%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLK----VTG 73
           LQG   +VTG +KG+G  +   L+ +GA V   +R++  L + + H    G      + G
Sbjct: 32  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 91
Query: 74  SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLV---MSTNF 130
           ++ D++   Q    +     L  G   + +N++  +    +L    +D   V   M  NF
Sbjct: 92  TMEDMTFAEQ---FVAQAGKLMGGLDMLILNHITNT----SLNLFHDDIHHVRKSMEVNF 144
Query: 131 ESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWA 189
            S   L   A P+L+ S   SIV++SS  G V+  +   YSA+K A++    ++  E++
Sbjct: 145 LSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPLVAAYSASKFALDGFFSSIRKEYS 202

>pdb|3PDJ|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase 1 (11b-Hsd1) In Complex With 4,4-Disubstituted Cyclohexylbenzamide Inhibitor Length = 273

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 85/179 (47%), Gaps = 15/179 (8%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLK----VTG 73
           LQG   +VTG +KG+G  +   L+ +GA V   +R++  L + + H    G      + G
Sbjct: 13  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 72
Query: 74  SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLV---MSTNF 130
           ++ D++   Q    +     L  G   + +N++  +    +L    +D   V   M  NF
Sbjct: 73  TMEDMTFAEQ---FVAQAGKLMGGLDMLILNHITNT----SLNLFHDDIHHVRKSMEVNF 125
Query: 131 ESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWA 189
            S   L   A P+L+ S   SIV++SS  G V+  +   YSA+K A++    ++  E++
Sbjct: 126 LSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYS 183

>pdb|3BMC|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 112/270 (41%), Gaps = 28/270 (10%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC- 76
           ++   A+VTG  K +G A+  +L   G  V        E    +     K    T  VC 
Sbjct: 21  MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQ 80
Query: 77  -DVSSR---PQR-QTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFS--LVMSTN 129
            D+++    P   + +IN+    F G+ ++ VNN       P ++ + ED S    + T 
Sbjct: 81  ADLTNSNVLPASCEEIINSCFRAF-GRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQ 139
Query: 130 FESAFHLCQLAHPLLRASGAA--------------SIVLMSSALGIVSANVGTVYSATKG 175
                    +A  LL  S A               SIV +  A+        ++Y+  K 
Sbjct: 140 VAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKH 199
Query: 176 AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRL-GEPK 234
           A+  L ++ A E A   IR N VAP     P     +G  +  D+ + + P+GR     +
Sbjct: 200 ALVGLTQSAALELAPYGIRVNGVAPGVSLLPVA---MGEEE-KDKWRRKVPLGRREASAE 255
Query: 235 EVSSLVAFLCMPAASYITGQTVCIDGGFTV 264
           +++  V FL   +A YITG  + +DGG ++
Sbjct: 256 QIADAVIFLVSGSAQYITGSIIKVDGGLSL 285

>pdb|4HFR|A Chain A, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In Complex With An Orally Bioavailable Acidic Inhibitor Azd4017. Length = 272

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 85/179 (47%), Gaps = 15/179 (8%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLK----VTG 73
           LQG   +VTG +KG+G  +   L+ +GA V   +R++  L + + H    G      + G
Sbjct: 12  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 71
Query: 74  SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLV---MSTNF 130
           ++ D++   Q    +     L  G   + +N++  +    +L    +D   V   M  NF
Sbjct: 72  TMEDMTFAEQ---FVAQAGKLMGGLDMLILNHITNT----SLNLFHDDIHHVRKSMEVNF 124
Query: 131 ESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWA 189
            S   L   A P+L+ S   SIV++SS  G V+  +   YSA+K A++    ++  E++
Sbjct: 125 LSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPLVAAYSASKFALDGFFSSIRKEYS 182

>pdb|1MXH|A Chain A, Crystal Structure Of Substrate Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 169 VYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMG 228
           VY+  K A+  L +  A E A  +IR N+VAP     P   P     +  +E + + P+G
Sbjct: 181 VYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQ----ETQEEYRRKVPLG 236
Query: 229 R-LGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTV 264
           +      +++  +AFL    A YITG T+ +DGG  +
Sbjct: 237 QSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLIL 273

>pdb|2WD7|A Chain A, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 112/270 (41%), Gaps = 28/270 (10%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC- 76
           ++   A+VTG  K +G A+  +L   G  V        E    +     K    T  VC 
Sbjct: 1   MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQ 60
Query: 77  -DVSSR---PQR-QTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFS--LVMSTN 129
            D+++    P   + +IN+    F G+ ++ VNN       P ++ + ED S    + T 
Sbjct: 61  ADLTNSNVLPASCEEIINSCFRAF-GRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQ 119
Query: 130 FESAFHLCQLAHPLLRASGAA--------------SIVLMSSALGIVSANVGTVYSATKG 175
                    +A  LL  S A               SIV +  A+        ++Y+  K 
Sbjct: 120 VAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKH 179
Query: 176 AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRL-GEPK 234
           A+  L ++ A E A   IR N VAP     P     +G  +  D+ + + P+GR     +
Sbjct: 180 ALVGLTQSAALELAPYGIRVNGVAPGVSLLPVA---MGEEE-KDKWRRKVPLGRREASAE 235
Query: 235 EVSSLVAFLCMPAASYITGQTVCIDGGFTV 264
           +++  V FL   +A YITG  + +DGG ++
Sbjct: 236 QIADAVIFLVSGSAQYITGSIIKVDGGLSL 265

>pdb|3D5Q|A Chain A, Crystal Structure Of 11b-Hsd1 In Complex With Triazole Inhibitor Length = 272

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 85/179 (47%), Gaps = 15/179 (8%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLK----VTG 73
           LQG   +VTG +KG+G  +   L+ +GA V   +R++  L + + H    G      + G
Sbjct: 12  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 71
Query: 74  SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLV---MSTNF 130
           ++ D++   Q    +     L  G   + +N++  +    +L    +D   V   M  NF
Sbjct: 72  TMEDMTFAEQ---FVAQAGKLMGGLDMLILNHITNT----SLNLFHDDIHHVRKSMEVNF 124
Query: 131 ESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWA 189
            S   L   A P+L+ S   SIV++SS  G V+  +   YSA+K A++    ++  E++
Sbjct: 125 LSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYS 182

>pdb|1XU7|A Chain A, Crystal Structure Of The Interface Open Conformation Of Tetrameric 11b-hsd1 Length = 286

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 85/179 (47%), Gaps = 15/179 (8%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLK----VTG 73
           LQG   +VTG +KG+G  +   L+ +GA V   +R++  L + + H    G      + G
Sbjct: 26  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 85
Query: 74  SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLV---MSTNF 130
           ++ D++   Q    +     L  G   + +N++  +    +L    +D   V   M  NF
Sbjct: 86  TMEDMTFAEQ---FVAQAGKLMGGLDMLILNHITNT----SLNLFHDDIHHVRKSMEVNF 138
Query: 131 ESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWA 189
            S   L   A P+L+ S   SIV++SS  G V+  +   YSA+K A++    ++  E++
Sbjct: 139 LSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYS 196

>pdb|2IRW|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Ether Inhibitor Length = 264

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 85/179 (47%), Gaps = 15/179 (8%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLK----VTG 73
           LQG   +VTG +KG+G  +   L+ +GA V   +R++  L + + H    G      + G
Sbjct: 7   LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 66
Query: 74  SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLV---MSTNF 130
           ++ D++   Q    +     L  G   + +N++  +    +L    +D   V   M  NF
Sbjct: 67  TMEDMTFAEQ---FVAQAGKLMGGLDMLILNHITNT----SLNLFHDDIHHVRKSMEVNF 119
Query: 131 ESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWA 189
            S   L   A P+L+ S   SIV++SS  G V+  +   YSA+K A++    ++  E++
Sbjct: 120 LSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYS 177

>pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid Dehydrogenase Type Xi Length = 272

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 102/252 (40%), Gaps = 25/252 (9%)
Query: 8   ESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK 67
           + H  + R S+ G   L+TG   G+G     E + L + +      +  L E     +  
Sbjct: 19  QGHMPKRRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL 78
Query: 68  GLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMS 127
           G KV   V D S+R    +    V +   G ++I VNN G       + Y ++ F+    
Sbjct: 79  GAKVHTFVVDCSNREDIYSSAKKVKAEI-GDVSILVNNAG-------VVYTSDLFA-TQD 129
Query: 128 TNFESAFHLCQLAH--------PLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQ 179
              E  F +  LAH        P +  +    IV ++SA G VS      Y ++K A   
Sbjct: 130 PQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVG 189
Query: 180 LAKNLACEWAK---DNIRTNSVAPWYIRTPFTE---PLLGNGKFVDEVKSRTPMGRLGEP 233
             K L  E A      ++T  + P ++ T F +     LG     +EV +R   G L E 
Sbjct: 190 FHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPSTSLGPTLEPEEVVNRLMHGILTEQ 249
Query: 234 KE--VSSLVAFL 243
           K   + S +AFL
Sbjct: 250 KMIFIPSSIAFL 261

>pdb|2BEL|A Chain A, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In Complex With Nadp And Carbenoxolone Length = 283

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 86/183 (46%), Gaps = 15/183 (8%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLK----VTG 73
           LQG   +VTG +KG+G  +   L+ +GA V   +R++  L + + H    G      + G
Sbjct: 29  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 88
Query: 74  SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLV---MSTNF 130
           ++ D++   Q    +     L  G   + +N++  +    +L    +D   V   M  NF
Sbjct: 89  TMEDMTFAEQ---FVAQAGKLMGGLDMLILNHITNT----SLNLFHDDIHHVRKSMEVNF 141
Query: 131 ESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAK 190
            S   L   A P+L+ S   SIV++SS  G V+  +   YSA+K A++    ++  E++ 
Sbjct: 142 LSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSV 200
Query: 191 DNI 193
             +
Sbjct: 201 SRV 203

>pdb|2RBE|A Chain A, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1 Inhibitors Length = 275

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 85/179 (47%), Gaps = 15/179 (8%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLK----VTG 73
           LQG   +VTG +KG+G  +   L+ +GA V   +R++  L + + H    G      + G
Sbjct: 15  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 74
Query: 74  SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLV---MSTNF 130
           ++ D++   Q    +     L  G   + +N++  +    +L    +D   V   M  NF
Sbjct: 75  TMEDMTFAEQ---FVAQAGKLMGGLDMLILNHITNT----SLNLFHDDIHHVRKSMEVNF 127
Query: 131 ESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWA 189
            S   L   A P+L+ S   SIV++SS  G V+  +   YSA+K A++    ++  E++
Sbjct: 128 LSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYS 185

>pdb|2ILT|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Sulfone Inhibitor Length = 275

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 85/179 (47%), Gaps = 15/179 (8%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLK----VTG 73
           LQG   +VTG +KG+G  +   L+ +GA V   +R++  L + + H    G      + G
Sbjct: 22  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 81
Query: 74  SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLV---MSTNF 130
           ++ D++   Q    +     L  G   + +N++  +    +L    +D   V   M  NF
Sbjct: 82  TMEDMTFAEQ---FVAQAGKLMGGLDMLILNHITNT----SLNLFHDDIHHVRKSMEVNF 134
Query: 131 ESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWA 189
            S   L   A P+L+ S   SIV++SS  G V+  +   YSA+K A++    ++  E++
Sbjct: 135 LSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYS 192

>pdb|3JQ7|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/278 (24%), Positives = 113/278 (40%), Gaps = 44/278 (15%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLG--ATVHTCSRTET------ELNE------CIHH 63
           ++   A+VTG  K +G A+  +L   G    +H  +  E       ELN+       +  
Sbjct: 21  MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQ 80
Query: 64  LQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFS 123
             +    V  + C        + +IN+    F G+ ++ VNN       P ++ + ED S
Sbjct: 81  ADLTNSNVLPASC--------EEIINSCFRAF-GRCDVLVNNASAFYPTPLVQGDHEDNS 131
Query: 124 --LVMSTNFESAFHLCQLAHPLLRASGAA--------------SIVLMSSALGIVSANVG 167
               + T          +A  LL  S A               SIV +  A+        
Sbjct: 132 NGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAF 191
Query: 168 TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPM 227
           ++Y+  K A+  L ++ A E A   IR N VAP     P     +G  +  D+ + + P+
Sbjct: 192 SLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVA---MGEEE-KDKWRRKVPL 247
Query: 228 GRL-GEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTV 264
           GR     ++++  V FL   +A YITG  + +DGG ++
Sbjct: 248 GRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSL 285

>pdb|3CH6|A Chain A, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r, F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3- Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone Length = 286

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 85/179 (47%), Gaps = 15/179 (8%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLK----VTG 73
           LQG   +VTG +KG+G  +   L+ +GA V   +R++  L + + H    G      + G
Sbjct: 26  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 85
Query: 74  SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLV---MSTNF 130
           ++ D++   Q    +     L  G   + +N++  +    +L    +D   V   M  NF
Sbjct: 86  TMEDMTFAEQ---FVAQAGKLMGGLDMLILNHITNT----SLNLFHDDIHHVRKSMEVNF 138
Query: 131 ESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWA 189
            S   L   A P+L+ S   SIV++SS  G V+  +   YSA+K A++    ++  E++
Sbjct: 139 LSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYS 196

>pdb|2C7V|A Chain A, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1) In Ternary Complex With Cofactor And The Antifolate Methotrexate Length = 268

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/278 (24%), Positives = 113/278 (40%), Gaps = 44/278 (15%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLG--ATVHTCSRTET------ELNE------CIHH 63
           ++   A+VTG  K +G A+  +L   G    +H  +  E       ELN+       +  
Sbjct: 1   MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQ 60
Query: 64  LQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFS 123
             +    V  + C        + +IN+    F G+ ++ VNN       P ++ + ED S
Sbjct: 61  ADLTNSNVLPASC--------EEIINSCFRAF-GRCDVLVNNASAFYPTPLVQGDHEDNS 111
Query: 124 --LVMSTNFESAFHLCQLAHPLLRASGAA--------------SIVLMSSALGIVSANVG 167
               + T          +A  LL  S A               SIV +  A+        
Sbjct: 112 NGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAF 171
Query: 168 TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPM 227
           ++Y+  K A+  L ++ A E A   IR N VAP     P     +G  +  D+ + + P+
Sbjct: 172 SLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVA---MGEEE-KDKWRRKVPL 227
Query: 228 GRL-GEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTV 264
           GR     ++++  V FL   +A YITG  + +DGG ++
Sbjct: 228 GRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSL 265

>pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Avium Length = 322

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 102/260 (39%), Gaps = 23/260 (8%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATV----------HTCSRTETELNECIHHLQMK 67
           + G   +VTG   G+G A     +  GA V           + +   +     +  +   
Sbjct: 25  VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA 84
Query: 68  GLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMS 127
           G +      +V+   Q   LI T    F G L++ VNN G    +     + E+F  V++
Sbjct: 85  GGEAVADGSNVADWDQAAGLIQTAVETFGG-LDVLVNNAGIVRDRMIANTSEEEFDAVIA 143
Query: 128 TNFESAF----HLCQLAHPLLRASGAAS--IVLMSSALGIVSANVGTVYSATKGAMNQLA 181
            + +  F    H       L +A  A    I+  SS  G+  +     YSA K  +  L 
Sbjct: 144 VHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIATLT 203
Query: 182 KNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVA 241
              A E  +  +  N++AP   RT  TE +     F + + ++        P+ VS LV 
Sbjct: 204 LVGAAEMGRYGVTVNAIAP-SARTRMTETV-----FAEMMATQDQDFDAMAPENVSPLVV 257
Query: 242 FLCMPAASYITGQTVCIDGG 261
           +L    A  +TG+   ++GG
Sbjct: 258 WLGSAEARDVTGKVFEVEGG 277

>pdb|2WD7|B Chain B, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/278 (24%), Positives = 113/278 (40%), Gaps = 44/278 (15%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLG--ATVHTCSRTET------ELNE------CIHH 63
           ++   A+VTG  K +G A+  +L   G    +H  +  E       ELN+       +  
Sbjct: 1   MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQ 60
Query: 64  LQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFS 123
             +    V  + C        + +IN+    F G+ ++ VNN       P ++ + ED S
Sbjct: 61  ADLTNSNVLPASC--------EEIINSCFRAF-GRCDVLVNNASAFYPTPLVQGDHEDNS 111
Query: 124 --LVMSTNFESAFHLCQLAHPLLRASGAA--------------SIVLMSSALGIVSANVG 167
               + T          +A  LL  S A               SIV +  A+        
Sbjct: 112 NGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAF 171
Query: 168 TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPM 227
           ++Y+  K A+  L ++ A E A   IR N VAP     P     +G  +  D+ + + P+
Sbjct: 172 SLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVA---MGEEE-KDKWRRKVPL 227
Query: 228 GRL-GEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTV 264
           GR     ++++  V FL   +A YITG  + +DGG ++
Sbjct: 228 GRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSL 265

>pdb|2PFG|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Bigf2 Length = 276

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 66/143 (46%), Gaps = 10/143 (6%)
Query: 23  ALVTGGTKGLGLAVVEEL-SMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
           ALVTGG KG+GLA+V +L  +    V   +R  T     +  LQ +GL       D+   
Sbjct: 7   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDL 66
Query: 82  PQRQTLINTVSSLFNGKLNIFVNNVGTS--VLKPT-LEYNAEDFSLVMSTNFESAFHLCQ 138
              + L + +   + G L++ VNN G +  V  PT     AE   + M TNF     +  
Sbjct: 67  QSIRALRDFLRKEYGG-LDVLVNNAGIAFKVADPTPFHIQAE---VTMKTNFFGTRDVXT 122
Query: 139 LAHPLLRASGAASIVLMSSALGI 161
              PL++  G   +V +SS + +
Sbjct: 123 ELLPLIKPQG--RVVNVSSIMSV 143

>pdb|3JQ7|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/278 (24%), Positives = 113/278 (40%), Gaps = 44/278 (15%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLG--ATVHTCSRTET------ELNE------CIHH 63
           ++   A+VTG  K +G A+  +L   G    +H  +  E       ELN+       +  
Sbjct: 21  MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQ 80
Query: 64  LQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFS 123
             +    V  + C        + +IN+    F G+ ++ VNN       P ++ + ED S
Sbjct: 81  ADLTNSNVLPASC--------EEIINSCFRAF-GRCDVLVNNASAFYPTPLVQGDHEDNS 131
Query: 124 --LVMSTNFESAFHLCQLAHPLLRASGAA--------------SIVLMSSALGIVSANVG 167
               + T          +A  LL  S A               SIV +  A+        
Sbjct: 132 NGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAF 191
Query: 168 TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPM 227
           ++Y+  K A+  L ++ A E A   IR N VAP     P     +G  +  D+ + + P+
Sbjct: 192 SLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVA---MGEEE-KDKWRRKVPL 247
Query: 228 GRL-GEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTV 264
           GR     ++++  V FL   +A YITG  + +DGG ++
Sbjct: 248 GRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSL 285

>pdb|3F1L|A Chain A, The 0.95 A Structure Of An Oxidoreductase, Ycik From E.Coli Length = 252

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 6/186 (3%)
Query: 24  LVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHL-QMKGLKVTGSVCDV--SS 80
           LVTG + G+G       +  GATV    R E +L +   H+ +  G +    + D+   +
Sbjct: 16  LVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCT 75
Query: 81  RPQRQTLINTVSSLFNGKLNIFVNNVGT-SVLKPTLEYNAEDFSLVMSTNFESAFHLCQL 139
               Q L   ++  +  +L+  ++N G    + P  E N + +  VM  N  + F L Q 
Sbjct: 76  SENCQQLAQRIAVNYP-RLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQA 134
Query: 140 AHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVA 199
             PLL  S A S+V  SS++G         Y+A+K A   + + LA E+ +  +R N + 
Sbjct: 135 LLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEY-QQRLRVNCIN 193
Query: 200 PWYIRT 205
           P   RT
Sbjct: 194 PGGTRT 199

>pdb|3P19|A Chain A, Improved Nadph-Dependent Blue Fluorescent Protein Length = 266

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 54/239 (22%), Positives = 97/239 (40%), Gaps = 21/239 (8%)
Query: 24  LVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC---DVSS 80
           ++TG + G+G A+    S  G  +   +R    L         K L +  ++C   DV+ 
Sbjct: 20  VITGASSGIGEAIARRFSEEGHPLLLLARRVERL---------KALNLPNTLCAQVDVTD 70
Query: 81  RPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLA 140
           +    T I     ++ G  +  VNN G  +L       A ++  +   N     +  Q  
Sbjct: 71  KYTFDTAITRAEKIY-GPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAV 129
Query: 141 HPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAP 200
              ++A    +I+ +SS  G  +      Y  TK A++ +++N+  E A  N+R  ++AP
Sbjct: 130 LAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAP 189
Query: 201 WYIRTPFTEPLLGNGKFVDEVKS-RTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCI 258
             ++T          +  D   + R  MG +    +V+  V F      +Y   Q VCI
Sbjct: 190 SAVKTELLSHTTSQ-QIKDGYDAWRVDMGGVLAADDVARAVLF------AYQQPQNVCI 241

>pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Hydroxysteroid Dehydrogenase Like 2 (Hsdl2) Length = 346

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 80/196 (40%), Gaps = 11/196 (5%)
Query: 14  NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECI-------HHLQM 66
           N   L G T  +TG ++G+G A+  + +  GA +   ++T     + +         ++ 
Sbjct: 39  NTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEA 98
Query: 67  KGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVM 126
            G K    + DV    Q    +      F G ++I VNN     L  TL+   +   L+M
Sbjct: 99  VGGKALPCIVDVRDEQQISAAVEKAIKKFGG-IDILVNNASAISLTNTLDTPTKRLDLMM 157
Query: 127 STNFESAFHLCQLAHPLLRASGAASIVLMSSALGI--VSANVGTVYSATKGAMNQLAKNL 184
           + N    +   +   P L+ S  A I+ +S  L +  V       Y+  K  M+     +
Sbjct: 158 NVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGM 217
Query: 185 ACEWAKDNIRTNSVAP 200
           A E+ K  I  N++ P
Sbjct: 218 AEEF-KGEIAVNALWP 232

>pdb|3F5Q|A Chain A, Crystal Structure Of Putative Short Chain Dehydrogenase From Escherichia Coli Cft073 Length = 262

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 85/186 (45%), Gaps = 6/186 (3%)
Query: 24  LVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHL-QMKGLKVTGSVCDV--SS 80
           LVTG + G+G       +  GATV    R E +L +   H+ +  G +    + D+   +
Sbjct: 18  LVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCT 77
Query: 81  RPQRQTLINTVSSLFNGKLNIFVNNVGT-SVLKPTLEYNAEDFSLVMSTNFESAFHLCQL 139
               Q L   ++  +  +L+  ++N G    + P  E + + +  VM  N  + F L Q 
Sbjct: 78  SEDCQQLAQRIAVNYP-RLDGVLHNAGLLGDVCPMSEQDPQVWQDVMQVNVNATFMLTQA 136
Query: 140 AHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVA 199
             PLL  S A S+V  SS++G         Y+A+K A   + + LA E+ +  +R N + 
Sbjct: 137 LLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEY-QQRLRVNCIN 195
Query: 200 PWYIRT 205
           P   RT
Sbjct: 196 PGGTRT 201

>pdb|3GMD|A Chain A, Structure-Based Design Of 7-Azaindole-Pyrrolidines As Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I Length = 264

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 78/175 (44%), Gaps = 9/175 (5%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNE----CIHHLQMKGLKVTG 73
           LQG   +VTG +KG+G  +   LS +GA V   +R+E  L +    C+         + G
Sbjct: 7   LQGKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAASAHYIAG 66
Query: 74  SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESA 133
           ++ D++   Q    I     L  G   + +N++  + L      +      VM  NF S 
Sbjct: 67  TMEDMTFAEQ---FIVKAGKLMGGLDMLILNHITQTSLS-LFHDDIHSVRRVMEVNFLSY 122
Query: 134 FHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEW 188
             +   A P+L+ S   SI ++SS  G V+  +   YSA+K A++     +  E 
Sbjct: 123 VVMSTAALPMLKQSN-GSIAVISSLAGKVTYPMVAPYSASKFALDGFFSTIRTEL 176

>pdb|3F5S|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase From Shigella Flexneri 2a Str. 301 Length = 255

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 84/186 (45%), Gaps = 6/186 (3%)
Query: 24  LVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHL-QMKGLKVTGSVCDV--SS 80
           LVTG + G+G       +  GATV    R E +L +   H+ +  G +    + D+   +
Sbjct: 14  LVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCT 73
Query: 81  RPQRQTLINTVSSLFNGKLNIFVNNVGT-SVLKPTLEYNAEDFSLVMSTNFESAFHLCQL 139
               Q L   +   +  +L+  ++N G    + P  E N + +  VM  N  + F L Q 
Sbjct: 74  SENCQQLAQRIVVNYP-RLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQINVNATFMLTQA 132
Query: 140 AHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVA 199
             PLL  S A S+V  SS++G         Y+A+K A   + + LA E+ +  +R N + 
Sbjct: 133 LLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEY-QQRLRVNCIN 191
Query: 200 PWYIRT 205
           P   RT
Sbjct: 192 PGGTRT 197

>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 110/243 (45%), Gaps = 16/243 (6%)
Query: 15  RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVT-- 72
           RW  +   ALVTG + G+G AV   L   G  V  C+RT   + E     +  G   T  
Sbjct: 29  RW--RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLI 86
Query: 73  GSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFES 132
              CD+S+     ++ + + S  +G ++I +NN G +     L  +   +  + + N   
Sbjct: 87  PYRCDLSNEEDILSMFSAIRSQHSG-VDICINNAGLARPDTLLSGSTSGWKDMFNVNV-L 144
Query: 133 AFHLC-QLAHPLL--RASGAASIVLMSSALG--IVSANVGTVYSATKGAMNQLAKNLACE 187
           A  +C + A+  +  R      I+ ++S  G  ++  +V   YSATK A+  L + L  E
Sbjct: 145 ALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQE 204
Query: 188 W--AKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAF-LC 244
              A+ +IR   ++P  + T F   L  + K  ++  +     +  +P++V+  V + L 
Sbjct: 205 LREAQTHIRATCISPGVVETQFAFKL--HDKDPEKAAATYEQMKCLKPEDVAEAVIYVLS 262
Query: 245 MPA 247
            PA
Sbjct: 263 TPA 265

>pdb|1CWU|A Chain A, Brassica Napus Enoyl Acp Reductase A138g Mutant Complexed With Nad+ And Thienodiazaborine Length = 296

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 4/173 (2%)
Query: 97  GKLNIFVNNVGT--SVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVL 154
           G ++I V+++G    V KP LE + + +   +S +  S   L     P++   G ASI L
Sbjct: 117 GSIDILVHSLGNGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMN-PGGASISL 175
Query: 155 MSSALGIVSANVGTVYSATKGAMNQLAKNLACEWA-KDNIRTNSVAPWYIRTPFTEPLLG 213
              A   +    G   S+ K A+    + LA E   K NIR N+++   + +   + +  
Sbjct: 176 TYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGF 235
Query: 214 NGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNG 266
               ++   +  P+ +     EV +  AFL  P AS ITG T+ +D G    G
Sbjct: 236 IDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSMG 288

>pdb|1D7O|A Chain A, Crystal Structure Of Brassica Napus Enoyl Acyl Carrier Protein Reductase Complexed With Nad And Triclosan Length = 297

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 4/173 (2%)
Query: 97  GKLNIFVNNV--GTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVL 154
           G ++I V+++  G  V KP LE + + +   +S +  S   L     P++   G ASI L
Sbjct: 118 GSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMN-PGGASISL 176
Query: 155 MSSALGIVSANVGTVYSATKGAMNQLAKNLACEWA-KDNIRTNSVAPWYIRTPFTEPLLG 213
              A   +    G   S+ K A+    + LA E   K NIR N+++   + +   + +  
Sbjct: 177 TYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGF 236
Query: 214 NGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNG 266
               ++   +  P+ +     EV +  AFL  P AS ITG T+ +D G    G
Sbjct: 237 IDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSMG 289

>pdb|1ENO|A Chain A, Brassica Napus Enoyl Acp ReductaseNAD BINARY COMPLEX AT PH 8.0 AND Room Temperature Length = 312

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 4/173 (2%)
Query: 97  GKLNIFVNNV--GTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVL 154
           G ++I V+++  G  V KP LE + + +   +S +  S   L     P++   G ASI L
Sbjct: 128 GSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMN-PGGASISL 186
Query: 155 MSSALGIVSANVGTVYSATKGAMNQLAKNLACEWA-KDNIRTNSVAPWYIRTPFTEPLLG 213
              A   +    G   S+ K A+    + LA E   K NIR N+++   + +   + +  
Sbjct: 187 TYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGF 246
Query: 214 NGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNG 266
               ++   +  P+ +     EV +  AFL  P AS ITG T+ +D G    G
Sbjct: 247 IDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSMG 299

>pdb|3PPI|A Chain A, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase Type-2 From Mycobacterium Avium Length = 281

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/258 (22%), Positives = 107/258 (41%), Gaps = 26/258 (10%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
            +G +A+V+GG  GLG A V  L   G  V        +       L  +   V+    +
Sbjct: 28  FEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVS---TN 84
Query: 78  VSSRPQRQTLINTVSSLFNGKLNI-FVNNVGTSVLKPTLEYNAE-----DFSLVMSTNFE 131
           V+S       I   + L  G+L    V + G  V +  ++ +        F+  +     
Sbjct: 85  VTSEDSVLAAIEAANQL--GRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLN 142
Query: 132 SAFHLCQL-------AHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKN 183
             +++ +L       A P  R +G    +++++++      +G T Y+A K  +  L   
Sbjct: 143 GTYNVARLVAASIAAAEP--RENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGLTIA 200
Query: 184 LACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPM-GRLGEPKEVSSLVAF 242
            A + +   IR N++AP  ++TP  E +    + + +  +  P   RLG P E +   AF
Sbjct: 201 AARDLSSAGIRVNTIAPGTMKTPIMESV--GEEALAKFAANIPFPKRLGTPDEFADAAAF 258
Query: 243 LCMPAASYITGQTVCIDG 260
           L      YI G+ + +DG
Sbjct: 259 LLTN--GYINGEVMRLDG 274

>pdb|1N5D|A Chain A, Crystal Structure Of Porcine Testicular Carbonyl Reductase 20beta-Hydroxysteroid Dehydrogenase Length = 288

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 10/147 (6%)
Query: 23  ALVTGGTKGLGLAVVEEL-SMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
           ALVTG  KG+G A+V +L       V   +R        +  LQ +GL       D+   
Sbjct: 7   ALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRFHQLDIIDL 66
Query: 82  PQRQTLINTVSSLFNGKLNIFVNN--VGTSVLKPT-LEYNAEDFSLVMSTNFESAFHLCQ 138
              + L + +   + G L++ VNN  +   +  PT     AE   L M TNF    ++C 
Sbjct: 67  QSIRALCDFLRKEYGG-LDVLVNNAAIAFQLDNPTPFHIQAE---LTMKTNFMGTRNVCT 122
Query: 139 LAHPLLRASGAASIVLMSSALGIVSAN 165
              PL++  G   +V +SS  G+ + N
Sbjct: 123 ELLPLIKPQG--RVVNVSSTEGVRALN 147

>pdb|1Y5M|A Chain A, The Crystal Structure Of Murine 11b-Hydroxysteroid Dehydrogenase: An Important Therapeutic Target For Diabetes Length = 276

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 78/175 (44%), Gaps = 9/175 (5%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNE----CIHHLQMKGLKVTG 73
           LQG   +VTG +KG+G  +   LS +GA V   +R+E  L +    C+         + G
Sbjct: 16  LQGKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAASAHYIAG 75
Query: 74  SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESA 133
           ++ D++   Q    I     L  G   + +N++  + L      +      VM  NF S 
Sbjct: 76  TMEDMTFAEQ---FIVKAGKLMGGLDMLILNHITQTSLS-LFHDDIHSVRRVMEVNFLSY 131
Query: 134 FHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEW 188
             +   A P+L+ S   SI ++SS  G ++  +   YSA+K A++     +  E 
Sbjct: 132 VVMSTAALPMLKQSN-GSIAVISSLAGKMTQPMIAPYSASKFALDGFFSTIRTEL 185

>pdb|1UAY|A Chain A, Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa Dehydrogenase From Thermus Thermophilus Hb8 Length = 242

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 11/153 (7%)
Query: 117 YNAEDFSLVMSTNFESAFHLCQLAHPLLR-----ASGAASIVLMSSALGIVSANVG-TVY 170
           +  E F  V+  N    F++ +LA   +R     A G   +++ ++++      +G   Y
Sbjct: 89  HGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAY 148
Query: 171 SATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPM-GR 229
           +A+KG +  L    A E A   IR  +VAP    TP  + L    K    + ++ P   R
Sbjct: 149 AASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAK--ASLAAQVPFPPR 206
Query: 230 LGEPKEVSSLVAFLCMPAASYITGQTVCIDGGF 262
           LG P+E ++LV  L +     + G+ V +DG  
Sbjct: 207 LGRPEEYAALV--LHILENPMLNGEVVRLDGAL 237

>pdb|3I1J|A Chain A, Structure Of A Putative Short Chain Dehydrogenase From Pseudomonas Syringae Length = 247

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 109/248 (43%), Gaps = 24/248 (9%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG----LKVTG 73
           L+G   LVTG  +G+G A     +  GA+V    RTE  L E    ++  G    L +  
Sbjct: 12  LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIAL 71
Query: 74  SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTL---EYNAEDFSLVMSTNF 130
           ++ + +++ Q + L   V   F G+L+  ++N   S++ P     +   EDF  V   N 
Sbjct: 72  NLENATAQ-QYRELAARVEHEF-GRLDGLLHNA--SIIGPRTPLEQLPDEDFXQVXHVNV 127
Query: 131 ESAFHLCQLAHPLLRASGAASIVLMSSALGIVS-ANVGTVYSATKGAMNQLAKNLACEWA 189
            + F L +   PLL+ S  ASI   SS++G    AN G  Y  +K A   L + LA E  
Sbjct: 128 NATFXLTRALLPLLKRSEDASIAFTSSSVGRKGRANWG-AYGVSKFATEGLXQTLADELE 186
Query: 190 K-DNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAA 248
               +R NS+ P   RT         G          P+     P+++  +  +L  P +
Sbjct: 187 GVTAVRANSINPGATRT---------GXRAQAYPDENPLNNPA-PEDIXPVYLYLXGPDS 236
Query: 249 SYITGQTV 256
           + I GQ +
Sbjct: 237 TGINGQAL 244

>pdb|1XSE|A Chain A, Crystal Structure Of Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Length = 295

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 86/194 (44%), Gaps = 9/194 (4%)
Query: 4   PQQTESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNE---- 59
           P+ +  + +     LQG   +VTG +KG+G  +   L+ +GA V   +R++  L +    
Sbjct: 16  PRGSHMNEKFRPEMLQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVAR 75
Query: 60  CIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNA 119
           C+         + GS+ D++     +  +    +L  G   + +N+V  + L        
Sbjct: 76  CLELGAASAHYIAGSMEDMTF---AEEFVAEAGNLMGGLDMLILNHVLYNRLT-FFHGEI 131
Query: 120 EDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQ 179
           ++    M  NF S   L   A P+L  S   SI ++SS  G ++  +   YSA+K A++ 
Sbjct: 132 DNVRKSMEVNFHSFVVLSVAAMPMLMQS-QGSIAVVSSVAGKITYPLIAPYSASKFALDG 190
Query: 180 LAKNLACEWAKDNI 193
               L  E+  + +
Sbjct: 191 FFSTLRSEFLVNKV 204

>pdb|3LZ6|A Chain A, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With Pf-877423 Length = 263

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 9/180 (5%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNE----CIHHLQMKGLKVTG 73
           LQG   +VTG +KG+G  +   L+ +GA V   +R++  L +    C+         + G
Sbjct: 7   LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAG 66
Query: 74  SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESA 133
           S+ D++     +  +    +L  G   + +N+V  + L        ++    M  NF S 
Sbjct: 67  SMEDMTF---AEEFVAEAGNLMGGLDMLILNHVLYNRLT-FFHGEIDNVRKSMEVNFHSF 122
Query: 134 FHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNI 193
             L   A P+L  S   SI ++SS  G ++  +   YSA+K A++     L  E+  + +
Sbjct: 123 VVLSVAAMPMLMQS-QGSIAVVSSVAGKITYPLIAPYSASKFALDGFFSTLRSEFLVNKV 181

>pdb|3G49|A Chain A, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of Pf-915275 Length = 277

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 9/180 (5%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNE----CIHHLQMKGLKVTG 73
           LQG   +VTG +KG+G  +   L+ +GA V   +R++  L +    C+         + G
Sbjct: 9   LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAG 68
Query: 74  SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESA 133
           S+ D++     +  +    +L  G   + +N+V  + L        ++    M  NF S 
Sbjct: 69  SMEDMTF---AEEFVAEAGNLMGGLDMLILNHVLYNRL-TFFHGEIDNVRKSMEVNFHSF 124
Query: 134 FHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNI 193
             L   A P+L  S   SI ++SS  G ++  +   YSA+K A++     L  E+  + +
Sbjct: 125 VVLSVAAMPMLMQS-QGSIAVVSSVAGKITYPLIAPYSASKFALDGFFSTLRSEFLVNKV 183

>pdb|3E9N|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM Length = 245

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 107/240 (44%), Gaps = 39/240 (16%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELS------MLGATV-HTCSRTETELNECIHHLQMKGL 69
           SL+   A+VTG T G+G+ +V++LS       LG    H  +  E E  E I    +K +
Sbjct: 2   SLKKKIAVVTGATGGMGIEIVKDLSRDHIVYALGRNPEHLAALAEIEGVEPIESDIVKEV 61
Query: 70  KVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAE-DFSLVMST 128
              G V  + +     TL++  +   +  +       G+       E++A  D ++++  
Sbjct: 62  LEEGGVDKLKNLDHVDTLVHAAAVARDTTIE-----AGS-----VAEWHAHLDLNVIVP- 110
Query: 129 NFESAFHLCQLAHPLLRASGAAS--IVLMSSALGIVSANVGTVYSATKGAMNQLAKNLAC 186
                    +L+  LL A  AAS  ++ ++S  G       T+Y+A+K A+  LA     
Sbjct: 111 --------AELSRQLLPALRAASGCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRK 162
Query: 187 EWAKDNIRTNSVAPWYIRTPFTEPLLGNG--KFVDEVKSRTPMGRLGEPKEVSSLVAFLC 244
           E A + IR ++V+P    TP  + L+ +    F  E+          EPKE+++ + F+ 
Sbjct: 163 EEANNGIRVSTVSPGPTNTPMLQGLMDSQGTNFRPEIYI--------EPKEIANAIRFVI 214

>pdb|3DWF|A Chain A, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Mutant F278e Length = 276

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 9/180 (5%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNE----CIHHLQMKGLKVTG 73
           LQG   +VTG +KG+G  +   L+ +GA V   +R++  L +    C+         + G
Sbjct: 9   LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAG 68
Query: 74  SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESA 133
           S+ D++     +  +    +L  G   + +N+V  + L        ++    M  NF S 
Sbjct: 69  SMEDMTF---AEEFVAEAGNLMGGLDMLILNHVLYNRLT-FFHGEIDNVRKSMEVNFHSF 124
Query: 134 FHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNI 193
             L   A P+L  S   SI ++SS  G ++  +   YSA+K A++     L  E+  + +
Sbjct: 125 VVLSVAAMPMLMQS-QGSIAVVSSVAGKITYPLIAPYSASKFALDGFFSTLRSEFLVNKV 183

>pdb|1QSG|A Chain A, Crystal Structure Of Enoyl Reductase Inhibition By Triclosan Length = 265

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/195 (22%), Positives = 85/195 (43%), Gaps = 10/195 (5%)
Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFE---- 131
           CDV+      T+   +  ++  K + FV+++G     P  + + +  + V    F+    
Sbjct: 66  CDVAEDASIDTMFAELGKVWP-KFDGFVHSIG---FAPGDQLDGDYVNAVTREGFKIAHD 121
Query: 132 -SAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWA 189
            S++    +A          S +L  S LG   A     V    K ++    + +A    
Sbjct: 122 ISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMG 181
Query: 190 KDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAAS 249
            + +R N+++   IRT     +    K +   ++ TP+ R    ++V +  AFLC   ++
Sbjct: 182 PEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSA 241
Query: 250 YITGQTVCIDGGFTV 264
            I+G+ V +DGGF++
Sbjct: 242 GISGEVVHVDGGFSI 256

>pdb|3OJF|A Chain A, Crystal Structure Of The Bacillus Cereus Enoyl-Acyl Carrier Protein Reductase With Nadp+ And Indole Naphthyridinone (Complex Form) Length = 257

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/99 (25%), Positives = 45/99 (45%)
Query: 169 VYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMG 228
           V    K ++    K LA +  +  IR N+++   IRT   + +      + E++ R P+ 
Sbjct: 159 VMGVAKASLEASVKYLANDLGQHGIRVNAISAGPIRTLSAKGVGDFNSILREIEERAPLR 218
Query: 229 RLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNGF 267
           R    +EV     FL    A  +TG+ + +D G+ + G 
Sbjct: 219 RTTTQEEVGDTAVFLFSDLARGVTGENIHVDSGYHILGL 257

>pdb|1DFG|A Chain A, X-Ray Structure Of Escherichia Coli Enoyl Reductase With Bound Nad And Benzo-Diazaborine Length = 261

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 57/262 (21%), Positives = 107/262 (40%), Gaps = 27/262 (10%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG------LKV 71
           L G   LVTG        V  +LS+         R   EL     + ++KG       ++
Sbjct: 3   LSGKRILVTG--------VASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQL 54
Query: 72  TGSV---CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMST 128
              +   CDV+      T+   +  ++  K + FV+++G     P  + + +  + V   
Sbjct: 55  GSDIVLQCDVAEDASIDTMFAELGKVWP-KFDGFVHSIG---FAPGDQLDGDYVNAVTRE 110
Query: 129 NFE-----SAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAK 182
            F+     S++    +A          S +L  S LG   A     V    K ++    +
Sbjct: 111 GFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVR 170
Query: 183 NLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAF 242
            +A     + +R N+++   IRT     +    K +   ++ TP+ R    ++V +  AF
Sbjct: 171 YMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAF 230
Query: 243 LCMPAASYITGQTVCIDGGFTV 264
           LC   ++ I+G+ V +DGGF++
Sbjct: 231 LCSDLSAGISGEVVHVDGGFSI 252

>pdb|1C14|A Chain A, Crystal Structure Of E Coli Enoyl Reductase-nad+-triclosan Complex Length = 262

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 57/262 (21%), Positives = 107/262 (40%), Gaps = 27/262 (10%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG------LKV 71
           L G   LVTG        V  +LS+         R   EL     + ++KG       ++
Sbjct: 4   LSGKRILVTG--------VASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQL 55
Query: 72  TGSV---CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMST 128
              +   CDV+      T+   +  ++  K + FV+++G     P  + + +  + V   
Sbjct: 56  GSDIVLQCDVAEDASIDTMFAELGKVWP-KFDGFVHSIG---FAPGDQLDGDYVNAVTRE 111
Query: 129 NFE-----SAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAK 182
            F+     S++    +A          S +L  S LG   A     V    K ++    +
Sbjct: 112 GFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVR 171
Query: 183 NLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAF 242
            +A     + +R N+++   IRT     +    K +   ++ TP+ R    ++V +  AF
Sbjct: 172 YMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAF 231
Query: 243 LCMPAASYITGQTVCIDGGFTV 264
           LC   ++ I+G+ V +DGGF++
Sbjct: 232 LCSDLSAGISGEVVHVDGGFSI 253

>pdb|2QIO|A Chain A, X-Ray Structure Of Enoyl-Acyl Carrier Protein Reductase From Bacillus Anthracis With Triclosan Length = 256

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/98 (25%), Positives = 45/98 (45%)
Query: 169 VYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMG 228
           V    K ++    K LA +  +  IR N+++   IRT   + +      + E++ R P+ 
Sbjct: 159 VMGVAKASLEASVKYLANDLGQHGIRVNAISAGPIRTLSAKGVGDFNSILREIEERAPLR 218
Query: 229 RLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNG 266
           R    +EV     FL    A  +TG+ + +D G+ + G
Sbjct: 219 RTTTQEEVGDTAVFLFSDLARGVTGENIHVDSGYHILG 256

>pdb|3EK2|A Chain A, Crystal Structure Of Eonyl-(Acyl Carrier Protein) Reductase From Burkholderia Pseudomallei 1719b Length = 271

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 92/194 (47%), Gaps = 12/194 (6%)
Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVG----TSVLKPTLE-YNAEDFSLVMSTNF 130
           CDV+   Q   L  ++ + ++  L+  V+++G     ++    L+    E+F +    + 
Sbjct: 71  CDVADDAQIDALFASLKTHWD-SLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISA 129
Query: 131 ESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA--NVGTVYSATKGAMNQLAKNLACEW 188
            S   L + A P+L  S  AS++ +S  LG   A  N  T+  A K A+    + LA   
Sbjct: 130 YSFPALAKAALPML--SDDASLLTLSY-LGAERAIPNYNTMGLA-KAALEASVRYLAVSL 185
Query: 189 AKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAA 248
               +R N+++   I+T     +   GK +D V+S +P+ R    ++V +  AFL    A
Sbjct: 186 GAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTIEQVGNAGAFLLSDLA 245
Query: 249 SYITGQTVCIDGGF 262
           S +T + + +D GF
Sbjct: 246 SGVTAEVMHVDSGF 259

>pdb|3PJF|A Chain A, Structure Of Enr G93v Mutant-Nad+-Triclosan Complex Length = 270

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 57/262 (21%), Positives = 107/262 (40%), Gaps = 27/262 (10%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG------LKV 71
           L G   LVTG        V  +LS+         R   EL     + ++KG       ++
Sbjct: 4   LSGKRILVTG--------VASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQL 55
Query: 72  TGSV---CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMST 128
              +   CDV+      T+   +  ++  K + FV+++   V  P  + + +  + V   
Sbjct: 56  GSDIVLQCDVAEDASIDTMFAELGKVWP-KFDGFVHSI---VFAPGDQLDGDYVNAVTRE 111
Query: 129 NFE-----SAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAK 182
            F+     S++    +A          S +L  S LG   A     V    K ++    +
Sbjct: 112 GFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVR 171
Query: 183 NLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAF 242
            +A     + +R N+++   IRT     +    K +   ++ TP+ R    ++V +  AF
Sbjct: 172 YMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAF 231
Query: 243 LCMPAASYITGQTVCIDGGFTV 264
           LC   ++ I+G+ V +DGGF++
Sbjct: 232 LCSDLSAGISGEVVHVDGGFSI 253

>pdb|3NRC|A Chain A, Crystal Stucture Of The Francisella Tularensis Enoyl-Acyl Carrier Protein Reductase (Fabi) In Complex With Nad+ And Triclosan Length = 280

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 88/195 (45%), Gaps = 13/195 (6%)
Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYN------AEDFSLVMSTN 129
           CDV S  + + L   +  +++G L+  V+++  +  +  LE N       E FS+    +
Sbjct: 82  CDVISDQEIKDLFVELGKVWDG-LDAIVHSIAFAP-RDQLEGNFIDCVTREGFSIAHDIS 139
Query: 130 FESAFHLCQLAHPLLRASGAASIVL--MSSALGIVSANVGTVYSATKGAMNQLAKNLACE 187
             S   L +    +++   A+ + L  + +   + S N   V    K ++    +  A  
Sbjct: 140 AYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPSYNTMGV---AKASLEATVRYTALA 196
Query: 188 WAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA 247
             +D I+ N+V+   I+T     +    K +D     +P+ +  +  EV + VAFLC   
Sbjct: 197 LGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTVAFLCSDM 256
Query: 248 ASYITGQTVCIDGGF 262
           A+ ITG+ V +D G+
Sbjct: 257 ATGITGEVVHVDAGY 271

>pdb|3IAH|A Chain A, Crystal Structure Of Short Chain Dehydrogenase (ycik) From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. Lt2 In Complex With Nadp And Acetate. Length = 256

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 88/194 (45%), Gaps = 9/194 (4%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHL----QMKGLKVTG 73
           LQ    LVTG + G+G       +  GATV    R E +L     H+     ++    T 
Sbjct: 13  LQNRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIADEQHVQPQWFTL 72
Query: 74  SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVG-TSVLKPTLEYNAEDFSLVMSTNFES 132
            +   ++   RQ + + +++ +  +L+  ++N G    + P  E + + +  V   N  +
Sbjct: 73  DLLTCTAEECRQ-VADRIAAHYP-RLDGVLHNAGLLGEIGPXSEQDPQIWQDVXQVNVNA 130
Query: 133 AFHLCQLAHPLLRASGAASIVLMSSALGIV-SANVGTVYSATKGAMNQLAKNLACEWAKD 191
            F L Q   PLL  S A S+V  SS++G    AN G  Y+ +K A     + LA E+   
Sbjct: 131 TFXLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWG-AYATSKFATEGXXQVLADEYQNR 189
Query: 192 NIRTNSVAPWYIRT 205
           ++R N + P   RT
Sbjct: 190 SLRVNCINPGGTRT 203

>pdb|2JJY|A Chain A, Crystal Structure Of Francisella Tularensis Enoyl Reductase (Ftfabi) With Bound Nad Length = 268

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 88/195 (45%), Gaps = 13/195 (6%)
Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYN------AEDFSLVMSTN 129
           CDV S  + + L   +  +++G L+  V+++  +  +  LE N       E FS+    +
Sbjct: 62  CDVISDQEIKDLFVELGKVWDG-LDAIVHSIAFAP-RDQLEGNFIDCVTREGFSIAHDIS 119
Query: 130 FESAFHLCQLAHPLLRASGAASIVL--MSSALGIVSANVGTVYSATKGAMNQLAKNLACE 187
             S   L +    +++   A+ + L  + +   + S N   V    K ++    +  A  
Sbjct: 120 AYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPSYNTMGV---AKASLEATVRYTALA 176
Query: 188 WAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA 247
             +D I+ N+V+   I+T     +    K +D     +P+ +  +  EV + VAFLC   
Sbjct: 177 LGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTVAFLCSDM 236
Query: 248 ASYITGQTVCIDGGF 262
           A+ ITG+ V +D G+
Sbjct: 237 ATGITGEVVHVDAGY 251

>pdb|2HRB|A Chain A, Crystal Structure Of Human Carbonyl Reductase 3, Complexed With Nadp+ Length = 274

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 94/236 (39%), Gaps = 27/236 (11%)
Query: 23  ALVTGGTKGLGLAVVEEL-SMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
           ALVTG  +G+GLA+  EL       V   +R        +  LQ +GL       D+   
Sbjct: 5   ALVTGANRGIGLAIARELCRQFSGDVVLTARDVARGQAAVQQLQAEGLSPRFHQLDIDDL 64
Query: 82  PQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPT---LEYNAEDFSLVMSTNFESAFHLCQ 138
              + L + +   + G LN+ VNN   +         +  AE   + + TNF +  ++C 
Sbjct: 65  QSIRALRDFLRKEYGG-LNVLVNNAAVAFKSDDPMPFDIKAE---MTLKTNFFATRNMCN 120
Query: 139 LAHPLLRASGAASIVLMSS-----ALGIVSANVGTVYSA---TKGAMNQLAKNLACEWAK 190
              P+++  G   +V +SS     A    S ++   + +   T+G +  L K    E  K
Sbjct: 121 ELLPIMKPHG--RVVNISSLQCLRAFENCSEDLQERFHSETLTEGDLVDLMKKFV-EDTK 177
Query: 191 DNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP 246
           + +      P    +P+     G  K    V SR    RL E ++   ++   C P
Sbjct: 178 NEVHEREGWP---NSPY-----GVSKLGVTVLSRILARRLDEKRKADRILVNACCP 225

>pdb|3SC4|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase (A0qtm2 Homolog) Mycobacterium Thermoresistibile Length = 285

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/253 (22%), Positives = 105/253 (41%), Gaps = 21/253 (8%)
Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRT---ETELNECIH----HLQMKGL 69
           SL+G T  ++GG++G+GLA+ + ++  GA V   +++     +L   I+     ++  G 
Sbjct: 6   SLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGG 65
Query: 70  KVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTN 129
           +    V D+         +      F G ++I VNN     L    E   + F L+    
Sbjct: 66  QALPIVGDIRDGDAVAAAVAKTVEQFGG-IDICVNNASAINLGSIEEVPLKRFDLMNGIQ 124
Query: 130 FESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANV-GTVYSATKGAMNQLAKNLACEW 188
               + + Q   P ++      I+ +S  + +    +  T Y   K  M   A  +A E 
Sbjct: 125 VRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCALGIAEEL 184
Query: 189 AKDNIRTNSVAPW-YIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA 247
               I +N++ P   + T   + LLG  + +   +SR P        EV +  A++ +  
Sbjct: 185 RDAGIASNTLWPRTTVATAAVQNLLGGDEAM--ARSRKP--------EVYADAAYVVLNK 234
Query: 248 ASYITGQT-VCID 259
            S  TG T +C D
Sbjct: 235 PSSYTGNTLLCED 247

>pdb|3UCE|A Chain A, Crystal Structure Of A Small-Chain Dehydrogenase In Complex With Nadph Length = 223

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 95/244 (38%), Gaps = 40/244 (16%)
Query: 24  LVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQ 83
           +V GGT G+G  + ++L      VH  SR                   TG   D+S    
Sbjct: 10  VVLGGTSGIGAELAKQLESEHTIVHVASRQ------------------TG--LDISDEKS 49
Query: 84  RQTLINTVSSLFNGKLNIFVNNVGTSV-LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHP 142
                 T+     G  +  +   G+       ++           T F  A    +    
Sbjct: 50  VYHYFETI-----GAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGAR 104
Query: 143 LLRASGAASIVLMSSALG-IVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPW 201
            L+  G  SI L S  L   V AN   V +A   A+    K LA E A   IR N+++P 
Sbjct: 105 YLKQGG--SITLTSGMLSRKVVANT-YVKAAINAAIEATTKVLAKELAP--IRVNAISPG 159
Query: 202 YIRTPFTEPLLGNGKFVDEVKSRT----PMGRLGEPKEVSSLVAFLCMPAASYITGQTVC 257
             +T   + +  N    D +  RT    P+G++GE  +++  +A+L     SY+TG  + 
Sbjct: 160 LTKTEAYKGM--NADDRDAMYQRTQSHLPVGKVGEASDIA--MAYLFAIQNSYMTGTVID 215
Query: 258 IDGG 261
           +DGG
Sbjct: 216 VDGG 219

>pdb|3PJD|A Chain A, Structure Of Enr G93a Mutant-Nad+-Triclosan Complex Length = 270

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 56/262 (21%), Positives = 106/262 (40%), Gaps = 27/262 (10%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG------LKV 71
           L G   LVTG        V  +LS+         R   EL     + ++KG       ++
Sbjct: 4   LSGKRILVTG--------VASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQL 55
Query: 72  TGSV---CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMST 128
              +   CDV+      T+   +  ++  K + FV+++      P  + + +  + V   
Sbjct: 56  GSDIVLQCDVAEDASIDTMFAELGKVWP-KFDGFVHSI---AFAPGDQLDGDYVNAVTRE 111
Query: 129 NFE-----SAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAK 182
            F+     S++    +A          S +L  S LG   A     V    K ++    +
Sbjct: 112 GFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVR 171
Query: 183 NLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAF 242
            +A     + +R N+++   IRT     +    K +   ++ TP+ R    ++V +  AF
Sbjct: 172 YMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAF 231
Query: 243 LCMPAASYITGQTVCIDGGFTV 264
           LC   ++ I+G+ V +DGGF++
Sbjct: 232 LCSDLSAGISGEVVHVDGGFSI 253

>pdb|3TN7|A Chain A, Crystal Structure Of Short-Chain Alcohol Dehydrogenase From Hyperthermophilic Archaeon Thermococcus Sibiricus Complexed With 5- Hydroxy-Nadp Length = 257

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 11/194 (5%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHL-QMKGLKVTGSVC 76
           L+   A++TG ++G+G A+   L+  G  +   +R+   L +  H L Q +G++V     
Sbjct: 22  LEMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHL 81
Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           DVS     +     V   F G +++ V N G    K   E + E+F  ++  N    +  
Sbjct: 82  DVSKAESVEEFSKKVLERF-GDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRT 140
Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANV---GTVYSATKGAMNQLAKNLACEWAKDNI 193
            +     L+ +G  ++V  S     VSA +   G  Y +TK A   L +    E    ++
Sbjct: 141 LKAFLDSLKRTGGLALVTTSD----VSARLIPYGGGYVSTKWAARALVRTFQIE--NPDV 194
Query: 194 RTNSVAPWYIRTPF 207
           R   + P  + T F
Sbjct: 195 RFFELRPGAVDTYF 208

>pdb|3F1K|A Chain A, Crystal Structure Of Ycik From E. Coli, An Oxidoreductase, Complexed With Nadp+ At 2.6a Resolution Length = 252

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 83/186 (44%), Gaps = 6/186 (3%)
Query: 24  LVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHL-QMKGLKVTGSVCDV--SS 80
           LVTG + G+G       +  GATV    R E +L +   H+ +  G +    + D+   +
Sbjct: 16  LVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCT 75
Query: 81  RPQRQTLINTVSSLFNGKLNIFVNNVGT-SVLKPTLEYNAEDFSLVMSTNFESAFHLCQL 139
               Q L   ++  +  +L+  ++N G    + P  E N + +  V   N  + F L Q 
Sbjct: 76  SENCQQLAQRIAVNYP-RLDGVLHNAGLLGDVCPXSEQNPQVWQDVXQVNVNATFXLTQA 134
Query: 140 AHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVA 199
             PLL  S A S+V  SS++G         Y+A+K A     + LA E+ +  +R N + 
Sbjct: 135 LLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGXXQVLADEY-QQRLRVNCIN 193
Query: 200 PWYIRT 205
           P   RT
Sbjct: 194 PGGTRT 199

>pdb|3PJE|A Chain A, Structure Of Enr G93s Mutant-Nad+-Triclosan Complex Length = 270

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 56/262 (21%), Positives = 106/262 (40%), Gaps = 27/262 (10%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG------LKV 71
           L G   LVTG        V  +LS+         R   EL     + ++KG       ++
Sbjct: 4   LSGKRILVTG--------VASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQL 55
Query: 72  TGSV---CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMST 128
              +   CDV+      T+   +  ++  K + FV+++      P  + + +  + V   
Sbjct: 56  GSDIVLQCDVAEDASIDTMFAELGKVWP-KFDGFVHSIS---FAPGDQLDGDYVNAVTRE 111
Query: 129 NFE-----SAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAK 182
            F+     S++    +A          S +L  S LG   A     V    K ++    +
Sbjct: 112 GFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVR 171
Query: 183 NLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAF 242
            +A     + +R N+++   IRT     +    K +   ++ TP+ R    ++V +  AF
Sbjct: 172 YMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAF 231
Query: 243 LCMPAASYITGQTVCIDGGFTV 264
           LC   ++ I+G+ V +DGGF++
Sbjct: 232 LCSDLSAGISGEVVHVDGGFSI 253

>pdb|4DRY|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Rhizobium Meliloti Length = 281

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 87/192 (45%), Gaps = 9/192 (4%)
Query: 8   ESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK 67
           +S   Q + S +G  ALVTGG  G+G  + + LS  G +V    R    L+     +  +
Sbjct: 21  QSXXAQGKGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGR 80
Query: 68  -GLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLK-PTLEYNAEDFSLV 125
            G  V   VCDV    Q   L   V + F  +L++ VNN G++V   P  E   E ++ +
Sbjct: 81  TGNIVRAVVCDVGDPDQVAALFAAVRAEF-ARLDLLVNNAGSNVPPVPLEEVTFEQWNGI 139
Query: 126 MSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANV----GTVYSATKGAMNQLA 181
           ++ N   AF   Q A    +A       ++++  G +SA         Y+ATK A+  L 
Sbjct: 140 VAANLTGAFLCTQHAFRXXKAQTPRGGRIINN--GSISAQTPRPNSAPYTATKHAITGLT 197
Query: 182 KNLACEWAKDNI 193
           K+ A +    +I
Sbjct: 198 KSTALDGRXHDI 209

>pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp Length = 235

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 82/190 (43%), Gaps = 11/190 (5%)
Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHL-QMKGLKVTGSVCDVSS 80
            A++TG ++G+G A+   L+  G  +   +R+   L +  H L Q +G++V     DVS 
Sbjct: 4   VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSK 63
Query: 81  RPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLA 140
               +     V   F G +++ V N G    K   E + E+F  ++  N    +   +  
Sbjct: 64  AESVEEFSKKVLERF-GDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAF 122
Query: 141 HPLLRASGAASIVLMSSALGIVSANV---GTVYSATKGAMNQLAKNLACEWAKDNIRTNS 197
              L+ +G  ++V  S     VSA +   G  Y +TK A   L +    E    ++R   
Sbjct: 123 LDSLKRTGGLALVTTSD----VSARLIPYGGGYVSTKWAARALVRTFQIE--NPDVRFFE 176
Query: 198 VAPWYIRTPF 207
           + P  + T F
Sbjct: 177 LRPGAVDTYF 186

>pdb|3UWR|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Strain 104 Length = 286

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 59/273 (21%), Positives = 107/273 (39%), Gaps = 32/273 (11%)
Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGA---TVHTCSRTET---------ELNECIHHLQ 65
           + G  A ++G  +G G +    L+  GA    +  C   E          +L E    ++
Sbjct: 13  VAGKVAFISGAARGQGRSHAVRLAQEGADIIAIDICGPIENLAYPHSTPEDLAETADLVK 72
Query: 66  MKGLKVTGSVCDVSSRPQRQTLINT-VSSLFNGKLNIFVNNVGTSVLKPTLEYNAED-FS 123
               ++  +  DV      ++ +++ V  L  G+L+I V N G       L    ++ + 
Sbjct: 73  DLDRRIVTAQVDVRDFEALKSAVDSGVEQL--GRLDIIVANAGVGTDGRKLHKIRDNVWQ 130
Query: 124 LVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA--NVGTVYSATKGAMNQLA 181
            ++  N    +H  +   P + + G    ++++S++G   A  N G   +A  G +  L 
Sbjct: 131 DMIDINLTGVWHTVKAGVPHVLSGGRGGSIVLTSSVGGRKAYPNTGHYIAAKHGVIG-LM 189
Query: 182 KNLACEWAKDNIRTNSVAPWYIRTPFT---------EPLLGNGKFVDEVKSRTPMGRLGE 232
           +  A E     IR N+V P  + T             P L N    D       M  L  
Sbjct: 190 RAFAVELGPHMIRVNAVLPTQVSTTMVMNDQTFRLFRPDLENPGPDDFAPISQMMHTLPV 249
Query: 233 P----KEVSSLVAFLCMPAASYITGQTVCIDGG 261
           P     ++S+ V FL    + Y+TG ++ +D G
Sbjct: 250 PWVDASDISNAVLFLASDESRYVTGVSLPVDAG 282

>pdb|3GEM|A Chain A, Crystal Structure Of Short-Chain Dehydrogenase From Pseudomonas Syringae Length = 260

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 104/257 (40%), Gaps = 20/257 (7%)
Query: 13  QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVT 72
           Q   +L     L+TG ++ +GL     L   G  V    RTE        H  +  L+  
Sbjct: 20  QGHXTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTE--------HASVTELRQA 71
Query: 73  GSVC---DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTN 129
           G+V    D S        I+ + +     L   V+N  +  L  T    A++F+   S +
Sbjct: 72  GAVALYGDFSCETGIXAFIDLLKTQ-TSSLRAVVHN-ASEWLAETPGEEADNFTRXFSVH 129
Query: 130 FESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWA 189
             + + +     PLL AS  A IV +S  +    ++    Y ATK  +  L  + A  +A
Sbjct: 130 XLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSFAARFA 189
Query: 190 KDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAAS 249
              ++ N +AP  +     +    +  +     +++ +G   EP       +   +  ++
Sbjct: 190 P-LVKVNGIAPALLXFQPKD----DAAYRANALAKSALGI--EPGAEVIYQSLRYLLDST 242
Query: 250 YITGQTVCIDGGFTVNG 266
           Y+TG T+ ++GG  V G
Sbjct: 243 YVTGTTLTVNGGRHVKG 259

>pdb|2PTG|A Chain A, Crystal Structure Of Eimeria Tenella Enoyl Reductase Length = 319

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 79/179 (44%), Gaps = 10/179 (5%)
Query: 97  GKLNIFVNNV--GTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVL 154
           G+++I V+++  G  V KP L+ + + +   +S++  S   L Q   PL++  G+A + L
Sbjct: 132 GQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVSLLQHFLPLMKEGGSA-LAL 190
Query: 155 MSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDN-IRTN--SVAPWYIRTPFTEPL 211
              A   V    G   S+ K A+    + LA E  +   +R N  S  P   R       
Sbjct: 191 SYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRAASAIGK 250
Query: 212 LGNGKFVDEV----KSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNG 266
            G+  F+D      ++  P+ +  E  +V     FL  P A  +TG T+ +D G    G
Sbjct: 251 AGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGLHAMG 309

>pdb|3E9Q|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase From Shigella Flexneri Length = 273

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 82/186 (44%), Gaps = 6/186 (3%)
Query: 24  LVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHL-QMKGLKVTGSVCDV--SS 80
           LVTG + G+G       +  GATV    R E +L +   H+ +  G +    + D+   +
Sbjct: 37  LVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCT 96
Query: 81  RPQRQTLINTVSSLFNGKLNIFVNNVGT-SVLKPTLEYNAEDFSLVMSTNFESAFHLCQL 139
               Q L   +   +  +L+  ++N G    + P  E N + +  V   N  + F L Q 
Sbjct: 97  SENCQQLAQRIVVNYP-RLDGVLHNAGLLGDVCPXSEQNPQVWQDVXQINVNATFXLTQA 155
Query: 140 AHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVA 199
             PLL  S A S+V  SS++G         Y+A+K A     + LA E+ +  +R N + 
Sbjct: 156 LLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGXXQVLADEY-QQRLRVNCIN 214
Query: 200 PWYIRT 205
           P   RT
Sbjct: 215 PGGTRT 220

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	270
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	1e-142
1xq1_A	266	Putative tropinone reducatse; structural genomics,	1e-141
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	1e-139
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	8e-86
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	3e-83
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	4e-83
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	4e-82
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	5e-82
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	3e-80
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	4e-80
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	4e-80
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	7e-80
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	9e-80
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	8e-79
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	3e-77
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	4e-76
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	4e-76
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	5e-76
4e4y_A	244	Short chain dehydrogenase family protein; structur	1e-74
3imf_A	257	Short chain dehydrogenase; structural genomics, in	1e-74
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	3e-74
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	6e-74
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	8e-74
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	9e-74
3cxt_A	291	Dehydrogenase with different specificities; rossma	2e-73
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	4e-73
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	6e-73
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	1e-72
4dqx_A	277	Probable oxidoreductase protein; structural genomi	2e-72
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	3e-72
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	6e-72
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	2e-71
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	3e-71
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	3e-71
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	4e-71
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	4e-71
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	5e-71
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	9e-71
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	1e-70
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	1e-70
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	1e-70
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	1e-70
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	3e-70
1xkq_A	280	Short-chain reductase family member (5D234); parra	4e-70
1spx_A	278	Short-chain reductase family member (5L265); paral	4e-70
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	6e-70
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	8e-70
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	1e-69
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	1e-69
1xhl_A	297	Short-chain dehydrogenase/reductase family member	2e-69
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	2e-69
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	2e-69
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	3e-69
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	4e-69
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	5e-68
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	6e-68
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	4e-67
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	5e-67
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	1e-66
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	1e-66
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	1e-66
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	2e-66
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	2e-66
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	3e-66
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	6e-66
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	1e-65
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	3e-65
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	3e-65
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	3e-65
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	7e-65
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	8e-65
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	1e-64
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	1e-64
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	2e-64
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	4e-64
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	1e-63
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	2e-63
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	3e-63
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	4e-63
3rih_A	293	Short chain dehydrogenase or reductase; structural	9e-63
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	1e-62
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	2e-62
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	2e-62
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-62
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	6e-62
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	8e-62
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	3e-61
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	5e-61
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	7e-61
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	1e-60
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	1e-60
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	1e-60
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	3e-60
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	5e-60
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	2e-59
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	2e-59
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	2e-59
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	3e-59
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	6e-59
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	7e-59
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	1e-58
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-58
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	2e-58
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	3e-58
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	7e-58
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	1e-57
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	2e-57
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	2e-57
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	2e-57
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	3e-57
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	4e-57
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	4e-57
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	4e-57
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	5e-57
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-56
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	1e-56
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	2e-56
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	3e-56
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	1e-55
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	1e-55
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	3e-55
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	4e-55
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	5e-55
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	5e-55
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	6e-55
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	8e-55
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	1e-54
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	1e-54
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	2e-54
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	4e-54
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	6e-54
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	1e-53
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	2e-53
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	3e-53
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	7e-53
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	1e-52
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	1e-52
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	2e-52
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	2e-52
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	2e-52
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	3e-52
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	4e-51
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	1e-49
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	2e-48
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	2e-48
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	8e-48
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	4e-47
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	1e-46
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	1e-45
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	1e-45
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	3e-45
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	7e-45
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	2e-43
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	3e-42
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	2e-41
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	2e-41
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	7e-40
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	7e-40
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	5e-39
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	1e-38
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	5e-38
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	5e-38
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	7e-37
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	9e-36
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	2e-34
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	2e-33
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	9e-33
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	3e-31
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	2e-28
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	9e-31
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	2e-30
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	3e-29
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	1e-27
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	1e-27
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	2e-27
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	2e-27
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	6e-27
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	2e-26
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	3e-26
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	2e-25
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	2e-25
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	2e-25
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	1e-24
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	4e-24
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	7e-22
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	5e-21
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	4e-15
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	6e-15
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	6e-15
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	1e-14
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	1e-14
4alk_A	282	ENR, enoyl-[acyl-carrier-protein] reductase [NADPH	2e-14
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	2e-14
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	3e-14
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	3e-14
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	4e-14
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	5e-14
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	9e-14
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	1e-13
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	7e-12
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	1e-09
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	2e-08
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	9e-08
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	1e-07
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	6e-07
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	1e-06
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	3e-06
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	1e-05
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	1e-05
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	3e-05
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	9e-05
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	4e-04
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	6e-04

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  399 bits (1028), Expect = e-142
 Identities = 141/273 (51%), Positives = 195/273 (71%), Gaps = 5/273 (1%)

Query: 1   MAQPQQTESH-SRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNE 59
           M + + +  + + + RWSL+G TALVTGG+KG+G A+VEEL+ LGA V+TCSR E EL+E
Sbjct: 1   MEESKVSMMNCNNEGRWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDE 60

Query: 60  CIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNA 119
           C+   + KGL V GSVCD+ SR +R  L+ TV+ +F+GKLNI VNN G  + K   ++  
Sbjct: 61  CLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTE 120

Query: 120 EDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQ 179
           +D++++M TNFE+A+HL Q+A+PLL+AS   +++ +SS  G  +    ++YSA+KGA+NQ
Sbjct: 121 KDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQ 180

Query: 180 LAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNG----KFVDEVKSRTPMGRLGEPKE 235
           + K+LACEWAKDNIR NSVAP  I TP  E  +       + +D    +TPMGR G+P+E
Sbjct: 181 MTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQE 240

Query: 236 VSSLVAFLCMPAASYITGQTVCIDGGFTVNGFF 268
           VS+L+AFLC PAASYITGQ +  DGGFT NG F
Sbjct: 241 VSALIAFLCFPAASYITGQIIWADGGFTANGGF 273

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score =  395 bits (1017), Expect = e-141
 Identities = 164/259 (63%), Positives = 201/259 (77%), Gaps = 1/259 (0%)

Query: 11  SRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLK 70
            +  RWSL+  T LVTGGTKG+G A+VEE +  GA +HTC+R E ELNEC+   Q KG +
Sbjct: 5   EQSQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQ 64

Query: 71  VTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNF 130
           VTGSVCD S RP+R+ L+ TVSS+F GKL+I +NN+G    KPTL+Y AEDFS  +STN 
Sbjct: 65  VTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNL 124

Query: 131 ESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAK 190
           ESA+HL QLAHPLL+ASG  +I+ MSS  G+VSA+VG++YSATKGA+NQLA+NLACEWA 
Sbjct: 125 ESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWAS 184

Query: 191 DNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY 250
           D IR N+VAP  I TP  E +  + +F   V SR P+GR GEP+EVSSLVAFLCMPAASY
Sbjct: 185 DGIRANAVAPAVIATPLAEAVYDD-EFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASY 243

Query: 251 ITGQTVCIDGGFTVNGFFF 269
           ITGQT+C+DGG TVNGF +
Sbjct: 244 ITGQTICVDGGLTVNGFSY 262

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score =  391 bits (1008), Expect = e-139
 Identities = 132/258 (51%), Positives = 181/258 (70%), Gaps = 3/258 (1%)

Query: 14  NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTG 73
            RW+L+G TALVTGG++G+G  +VEEL+ LGA+V+TCSR + ELN+C+   + KG KV  
Sbjct: 3   GRWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEA 62

Query: 74  SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESA 133
           SVCD+SSR +RQ L+NTV++ F+GKLNI VNN G  + K   +Y  ED+SL+MS NFE+A
Sbjct: 63  SVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAA 122

Query: 134 FHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNI 193
           +HL  LAHP L+AS   ++V +SS  G ++     VY ATKGAM+QL + LA EWAKDNI
Sbjct: 123 YHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNI 182

Query: 194 RTNSVAPWYIRTPFTEPLLGNG---KFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY 250
           R N V P  I T   E  + +    + ++++  R  + R+GEPKE++++VAFLC PAASY
Sbjct: 183 RVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASY 242

Query: 251 ITGQTVCIDGGFTVNGFF 268
           +TGQ + +DGG   N  F
Sbjct: 243 VTGQIIYVDGGLMANCGF 260

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  255 bits (655), Expect = 8e-86
 Identities = 81/257 (31%), Positives = 131/257 (50%), Gaps = 2/257 (0%)

Query: 8   ESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK 67
            S   + R  L+   ALVT  T G+GLA+   L+  GA V   SR +  ++  +  LQ +
Sbjct: 2   ASTGVERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE 61

Query: 68  GLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTS-VLKPTLEYNAEDFSLVM 126
           GL VTG+VC V     R+ L+    +L  G ++I V+N   +      ++   E +  ++
Sbjct: 62  GLSVTGTVCHVGKAEDRERLVAMAVNLH-GGVDILVSNAAVNPFFGNIIDATEEVWDKIL 120

Query: 127 STNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLAC 186
             N ++   + +   P +   G  S++++SS            Y+ +K A+  L KNLA 
Sbjct: 121 HVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAV 180

Query: 187 EWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP 246
           E A  NIR N +AP  I+T F++ L  +    + +K    + RLG P++ + +V+FLC  
Sbjct: 181 ELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSE 240

Query: 247 AASYITGQTVCIDGGFT 263
            ASYITG+TV + GG  
Sbjct: 241 DASYITGETVVVGGGTA 257

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score =  248 bits (636), Expect = 3e-83
 Identities = 69/248 (27%), Positives = 112/248 (45%), Gaps = 10/248 (4%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
            L G   LVTG  KG+G   V+ L   GA V   SRT+ +L+     L  +   +     
Sbjct: 4   FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDS----LVRECPGIEPVCV 59

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           D+      +  + +V     G +++ VNN   ++L+P LE   E F      N  +   +
Sbjct: 60  DLGDWEATERALGSV-----GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQV 114

Query: 137 CQLAHPLLRASGAA-SIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRT 195
            Q+    L A G   +IV +SS     +    +VY +TKGA++ L K +A E     IR 
Sbjct: 115 SQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRV 174

Query: 196 NSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT 255
           N+V P  + T   +    +      + +R P+G+  E + V + + FL    +   TG T
Sbjct: 175 NAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGST 234

Query: 256 VCIDGGFT 263
           + ++GGF 
Sbjct: 235 LPVEGGFW 242

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score =  248 bits (636), Expect = 4e-83
 Identities = 69/250 (27%), Positives = 116/250 (46%), Gaps = 10/250 (4%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           +  G+ ALVTG  KG+G   V+ L   GA V   +RT ++L      L  +   +     
Sbjct: 4   NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVS----LAKECPGIEPVCV 59

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           D+      +  +  +     G +++ VNN    +++P LE   E F    S N  S F +
Sbjct: 60  DLGDWDATEKALGGI-----GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQV 114

Query: 137 CQLAHPLLRASGAA-SIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRT 195
            Q+    +   G   SIV +SS +  V+      YS+TKGAM  L K +A E     IR 
Sbjct: 115 SQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRV 174

Query: 196 NSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT 255
           NSV P  + T   + +  + +F  ++K R P+ +  E ++V + + FL    ++  +G  
Sbjct: 175 NSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSGGG 234

Query: 256 VCIDGGFTVN 265
           + +D G+  +
Sbjct: 235 ILVDAGYLAS 244

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  247 bits (632), Expect = 4e-82
 Identities = 66/254 (25%), Positives = 114/254 (44%), Gaps = 5/254 (1%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNEC---IHHLQMKGLKVTG 73
           S Q  T LVTGG  G+G  V   L   GA+V    R   +L      +  L   G  +  
Sbjct: 8   SFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRY 67

Query: 74  SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTS-VLKPTLEYNAEDFSLVMSTNFES 132
              D+++  +    ++ V++   G+L+  V+  G S  + P  + ++E +   +  N   
Sbjct: 68  EPTDITNEDETARAVDAVTAWH-GRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNG 126

Query: 133 AFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDN 192
             ++ + A   +   G  S V +SS     +      Y  TK A++ L +  A E     
Sbjct: 127 TMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADELGASW 186

Query: 193 IRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT 252
           +R NS+ P  IRT     +  + +   +    TP+ R GE ++V+++  FL   AAS++T
Sbjct: 187 VRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAMFLLSDAASFVT 246

Query: 253 GQTVCIDGGFTVNG 266
           GQ + +DGG  +  
Sbjct: 247 GQVINVDGGQMLRR 260

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score =  246 bits (630), Expect = 5e-82
 Identities = 81/252 (32%), Positives = 123/252 (48%), Gaps = 6/252 (2%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
            L    A+VTGG + +GLA V  L+  GA V      E    + +  L+M+G  V+  V 
Sbjct: 10  RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVM 69

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLK-PTLEYNAEDFSLVMSTNFESAFH 135
           DV++    Q  + +V     G+++I V   G  + +    +     +   +  N    F 
Sbjct: 70  DVTNTESVQNAVRSVHEQE-GRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFR 128

Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVG---TVYSATKGAMNQLAKNLACEWAKDN 192
            CQ    ++       IV + S  G++  N       Y+A+K  ++Q  ++LA EWA   
Sbjct: 129 SCQAVGRIMLEQKQGVIVAIGSMSGLI-VNRPQQQAAYNASKAGVHQYIRSLAAEWAPHG 187

Query: 193 IRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT 252
           IR N+VAP YI T  T   +   +  D   + TPMGR+G+P EV+S+V FL   AAS +T
Sbjct: 188 IRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQFLASDAASLMT 247

Query: 253 GQTVCIDGGFTV 264
           G  V +D GFTV
Sbjct: 248 GAIVNVDAGFTV 259

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score =  241 bits (617), Expect = 3e-80
 Identities = 82/248 (33%), Positives = 121/248 (48%), Gaps = 2/248 (0%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
            L G TALVTG  +GLG A  E L+  GA V       T L E +  L  KG    G   
Sbjct: 6   DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAF 65

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           DV+     +   + + +     ++I +NN G    KP +E   E++  V+ TN  SAF +
Sbjct: 66  DVTDELAIEAAFSKLDAEG-IHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLV 124

Query: 137 CQLAHPLLRASGAA-SIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRT 195
            + A   + A  +   I+ + S     +      Y+A KG +  L  ++A EWA+ NI+T
Sbjct: 125 SRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQT 184

Query: 196 NSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT 255
           N++ P YI T     L+ + +F   VKS TP  R G P+E+     FL   A+ YI GQ 
Sbjct: 185 NAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLSSKASDYINGQI 244

Query: 256 VCIDGGFT 263
           + +DGG+ 
Sbjct: 245 IYVDGGWL 252

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score =  242 bits (619), Expect = 4e-80
 Identities = 79/257 (30%), Positives = 121/257 (47%), Gaps = 7/257 (2%)

Query: 13  QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVT 72
              +SL G  ALVTGG++G+G  + + L   GA V  C+R      +    L   G    
Sbjct: 22  HPYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQ 80

Query: 73  GSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFES 132
               D+SS    + L   +  L   +L+I VNN GTS       Y    +  VM  N  S
Sbjct: 81  AIPADLSSEAGARRLAQALGELS-ARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTS 139

Query: 133 AFHLCQLAHPLLRASGA----ASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACE 187
            F   Q   PLLR S +    A ++ + S  GI +       Y  +K A++QL++ LA E
Sbjct: 140 VFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKE 199

Query: 188 WAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA 247
              ++I  N +AP    +  T  +  + + ++   +  PMGR G P+E+++L   L   A
Sbjct: 200 LVGEHINVNVIAPGRFPSRMTRHIANDPQALEADSASIPMGRWGRPEEMAALAISLAGTA 259

Query: 248 ASYITGQTVCIDGGFTV 264
            +Y+TG  + IDGGF +
Sbjct: 260 GAYMTGNVIPIDGGFHL 276

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score =  241 bits (618), Expect = 4e-80
 Identities = 88/268 (32%), Positives = 137/268 (51%), Gaps = 4/268 (1%)

Query: 1   MAQPQQTESHSR-QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNE 59
           M   +    H   +  + L+G  ALVTGG++GLG  + + L+  G +V   SR   E +E
Sbjct: 1   MGSDKIHHHHHHMKEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASE 60

Query: 60  CIHHLQMK-GLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYN 118
               L  K G++     CDVS+  + + L+  V   F GKL+  VN  G +   P  E+ 
Sbjct: 61  AAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF-GKLDTVVNAAGINRRHPAEEFP 119

Query: 119 AEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTV-YSATKGAM 177
            ++F  V+  N    +++C+ A  LLR S   SI+ + S             Y+A+KG +
Sbjct: 120 LDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGV 179

Query: 178 NQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVS 237
             L K LA EW +  IR N +AP + RT  TE +  + + +D +  R P+GR G P+++ 
Sbjct: 180 ASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLK 239

Query: 238 SLVAFLCMPAASYITGQTVCIDGGFTVN 265
            +  FL    A Y+TGQ + +DGG+T N
Sbjct: 240 GVAVFLASEEAKYVTGQIIFVDGGWTAN 267

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score =  240 bits (615), Expect = 7e-80
 Identities = 77/254 (30%), Positives = 118/254 (46%), Gaps = 6/254 (2%)

Query: 13  QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVT 72
           +  + L G  A VTG   G+GL +    +  GA +    R    L+     L        
Sbjct: 4   RTVFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL--GAAVAA 61

Query: 73  GSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFES 132
             V DV+             ++    ++I VN+ G + L   LE +   +  VM+ N + 
Sbjct: 62  RIVADVTDAEAMTAAAAEAEAV--APVSILVNSAGIARLHDALETDDATWRQVMAVNVDG 119

Query: 133 AFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTV--YSATKGAMNQLAKNLACEWAK 190
            F   +     + A GA +IV + S  G +         Y A+KGA++QL + LA EWA 
Sbjct: 120 MFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAG 179

Query: 191 DNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY 250
             +R N++AP Y+ T  T  +    +  +     TPMGR GEP E+++   FL  PAASY
Sbjct: 180 RGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALFLASPAASY 239

Query: 251 ITGQTVCIDGGFTV 264
           +TG  + +DGG+TV
Sbjct: 240 VTGAILAVDGGYTV 253

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  240 bits (615), Expect = 9e-80
 Identities = 71/260 (27%), Positives = 113/260 (43%), Gaps = 3/260 (1%)

Query: 7   TESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHL-Q 65
           T          L G  AL+TG TKG+G  +    +  GA +    R  +EL+     L +
Sbjct: 7   TTDDRYAGVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGE 66

Query: 66  MKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLV 125
             G  V     D++       L    +  F G L++ VNN G S  +P ++ + + F   
Sbjct: 67  QFGTDVHTVAIDLAEPDAPAELARRAAEAF-GGLDVLVNNAGISHPQPVVDTDPQLFDAT 125

Query: 126 MSTNFESAFHLCQLAHPLLRASGAA-SIVLMSSALGIVSANVGTVYSATKGAMNQLAKNL 184
           ++ N  +   L       + A+G   +I+ ++SA  +        Y  +K  +    K L
Sbjct: 126 IAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVL 185

Query: 185 ACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLC 244
           A E     IR NSV P  + T   + + G+      + +R P+GR   P EVS  V +L 
Sbjct: 186 ARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVVWLA 245

Query: 245 MPAASYITGQTVCIDGGFTV 264
             AAS I G  + +DGG+T+
Sbjct: 246 SDAASMINGVDIPVDGGYTM 265

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score =  238 bits (610), Expect = 8e-79
 Identities = 71/261 (27%), Positives = 122/261 (46%), Gaps = 3/261 (1%)

Query: 5   QQTESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHL 64
           +     S    +SL G TA+VTG   G+G A+    +  GA V    RT+  + E    +
Sbjct: 16  ENLYFQSMTGPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTD-GVKEVADEI 74

Query: 65  QMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSL 124
              G      V D++       +   +++    ++++ VNN G     P  E +   +  
Sbjct: 75  ADGGGSAEAVVADLADLEGAANVAEELAAT--RRVDVLVNNAGIIARAPAEEVSLGRWRE 132

Query: 125 VMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNL 184
           V++ N ++A+ L +     + A G+  IV ++S L          Y+A+K A+  L + L
Sbjct: 133 VLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRAL 192

Query: 185 ACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLC 244
           A EWA   +  N++AP Y+ T  T  L  + +   E+ +R P GR   P+++     FL 
Sbjct: 193 ASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLA 252

Query: 245 MPAASYITGQTVCIDGGFTVN 265
             AASY+ GQ + +DGG+  +
Sbjct: 253 SDAASYVHGQVLAVDGGWLAS 273

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score =  234 bits (599), Expect = 3e-77
 Identities = 82/266 (30%), Positives = 128/266 (48%), Gaps = 9/266 (3%)

Query: 2   AQPQQTESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECI 61
           AQ Q   S S  + + L G  AL+TG + G+G  V    +  GA V   +R    L    
Sbjct: 14  AQTQGPGSMSVLDLFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVA 73

Query: 62  HHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAED 121
             +   G K     CDV+   Q + +++ ++    G ++I V N G   ++  L+   E+
Sbjct: 74  DEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGEL-GGIDIAVCNAGIVSVQAMLDMPLEE 132

Query: 122 FSLVMSTNFESAFHLCQLAHPLLRASGAA-SIVLMSSALGIVSANVG---TVYSATKGAM 177
           F  +  TN    F   Q A   +   G   +I+  +S  G +  N+    + Y  +K A+
Sbjct: 133 FQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHI-INIPQQVSHYCTSKAAV 191

Query: 178 NQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVS 237
             L K +A E A   IR NSV+P YIRT   EPL     +    + + P+GR+G P+E++
Sbjct: 192 VHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLA---DYHALWEPKIPLGRMGRPEELT 248

Query: 238 SLVAFLCMPAASYITGQTVCIDGGFT 263
            L  +L   A+SY+TG  + IDGG+T
Sbjct: 249 GLYLYLASAASSYMTGSDIVIDGGYT 274

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score =  230 bits (589), Expect = 4e-76
 Identities = 77/244 (31%), Positives = 119/244 (48%), Gaps = 12/244 (4%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
            ALVTGG++G+G A+ E L   G  V   SR   E  +         L       D+  +
Sbjct: 4   KALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQ--------SLGAVPLPTDLE-K 54

Query: 82  PQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAH 141
              + L+        G L++ V+    +V KP LE + E++  V+  + + AF L Q A 
Sbjct: 55  DDPKGLVKRALEAL-GGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAA 113

Query: 142 PLLRASGAASIVLMSSALGIVSANVGTV--YSATKGAMNQLAKNLACEWAKDNIRTNSVA 199
           P +  +G   ++ + S     +     +  Y+  K A+  L + LA EWA+  IR N + 
Sbjct: 114 PHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLC 173

Query: 200 PWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCID 259
           P Y+ T FT PL  N +  + + +R PMGR   P+E++ + A LC   A Y+TGQ V +D
Sbjct: 174 PGYVETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVLCGDEAEYLTGQAVAVD 233

Query: 260 GGFT 263
           GGF 
Sbjct: 234 GGFL 237

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  230 bits (590), Expect = 4e-76
 Identities = 73/254 (28%), Positives = 123/254 (48%), Gaps = 5/254 (1%)

Query: 11  SRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLK 70
              +   L G  A++TG   G+G  +    +  GA+V          N  +  +Q  G +
Sbjct: 2   FNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ 61

Query: 71  VTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNF 130
                CD++S  +   L +   S   GK++I VNN G    KP  +    DF      N 
Sbjct: 62  AFACRCDITSEQELSALADFAISKL-GKVDILVNNAGGGGPKP-FDMPMADFRRAYELNV 119

Query: 131 ESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWA 189
            S FHL QL  P +  +G   I+ ++S       N+  T Y+++K A + L +N+A +  
Sbjct: 120 FSFFHLSQLVAPEMEKNGGGVILTITSMAAEN-KNINMTSYASSKAAASHLVRNMAFDLG 178

Query: 190 KDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAAS 249
           + NIR N +AP  I T   + ++   +   ++   TP+ RLG+P+++++   FLC PAAS
Sbjct: 179 EKNIRVNGIAPGAILTDALKSVI-TPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAAS 237

Query: 250 YITGQTVCIDGGFT 263
           +++GQ + + GG  
Sbjct: 238 WVSGQILTVSGGGV 251

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score =  231 bits (592), Expect = 5e-76
 Identities = 70/268 (26%), Positives = 123/268 (45%), Gaps = 10/268 (3%)

Query: 1   MAQPQQTESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNEC 60
           +     T S +  + +SL+G  A VTG + G+G AV E  +  GA V     +     + 
Sbjct: 15  LPTKAPTLSKNVLDLFSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKA 74

Query: 61  IHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTL--EYN 118
            H  +  G+      C++S     +  I+     F G +++FV N G +  +       N
Sbjct: 75  EHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDF-GTIDVFVANAGVTWTQGPEIDVDN 133

Query: 119 AEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG---TVYSATKG 175
            + ++ ++S +    ++       + + +G  S+++ SS  G +  N+      Y+  K 
Sbjct: 134 YDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKI-VNIPQLQAPYNTAKA 192

Query: 176 AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKE 235
           A   LAK+LA EWA    R N+++P YI T  T+    +     +    TP+GR G  +E
Sbjct: 193 ACTHLAKSLAIEWAP-FARVNTISPGYIDTDITDFA--SKDMKAKWWQLTPLGREGLTQE 249

Query: 236 VSSLVAFLCMPAASYITGQTVCIDGGFT 263
           +     +L   A+++ TG  V IDGG+T
Sbjct: 250 LVGGYLYLASNASTFTTGSDVVIDGGYT 277

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score =  226 bits (579), Expect = 1e-74
 Identities = 59/256 (23%), Positives = 104/256 (40%), Gaps = 23/256 (8%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           S      LVTGG+KG+G AVVE L             +                +     
Sbjct: 1   SNAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF---------SAENLKFIKA 51

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           D++ +     +++ +    N   +    N G  +     + + E    V+  N  S+ + 
Sbjct: 52  DLTKQQDITNVLDIIK---NVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYF 108

Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTN 196
            +     L+     SIV   S    ++      Y+ +KGA+ Q+ K+LA + AK  IR N
Sbjct: 109 IKGLENNLKVGA--SIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDLAKYQIRVN 166

Query: 197 SVAPWYIRTPFTEPLLGNG---------KFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA 247
           +V P  + T     L+            +   + +   P+ R+ +P+E++ LV FL    
Sbjct: 167 TVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLSDK 226

Query: 248 ASYITGQTVCIDGGFT 263
           + ++TG  + IDGG+T
Sbjct: 227 SKFMTGGLIPIDGGYT 242

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score =  227 bits (581), Expect = 1e-74
 Identities = 63/257 (24%), Positives = 117/257 (45%), Gaps = 6/257 (2%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           +++    ++TGG+ G+G  +    +  GA V    RT+ +L E    ++    ++     
Sbjct: 3   AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQM 62

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           DV +    Q +I  +   F G+++I +NN   + + P  + +   ++ V++      F+ 
Sbjct: 63  DVRNTDDIQKMIEQIDEKF-GRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYC 121

Query: 137 CQLAHPLLRASG-AASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEWA-KDNI 193
            Q         G   +I+ M +      A  G +  +A K  +  + K LA EW  K  I
Sbjct: 122 SQAIGKYWIEKGIKGNIINMVATYA-WDAGPGVIHSAAAKAGVLAMTKTLAVEWGRKYGI 180

Query: 194 RTNSVAPWYIRTPFT-EPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT 252
           R N++AP  I      + L  + +         P+GRLG P+E++ L  +LC   A+YI 
Sbjct: 181 RVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGLAYYLCSDEAAYIN 240

Query: 253 GQTVCIDGGFTVNGFFF 269
           G  + +DGG  ++ + F
Sbjct: 241 GTCMTMDGGQHLHQYPF 257

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  226 bits (578), Expect = 3e-74
 Identities = 69/266 (25%), Positives = 109/266 (40%), Gaps = 15/266 (5%)

Query: 14  NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHL--QMKGLKV 71
             + L    A+VTGG+ G+GLA VE L   GA V  C+R    L      L  +  G ++
Sbjct: 2   KPYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARL 61

Query: 72  TGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFE 131
             SVCDV    Q +           G  +I VNN G   +    E   E +S  +   F 
Sbjct: 62  FASVCDVLDALQVRAFAEACERTL-GCASILVNNAGQGRVSTFAETTDEAWSEELQLKFF 120

Query: 132 SAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAK 190
           S  H  +   P L +   A+IV ++S L            SA +  +  L +++A E+A 
Sbjct: 121 SVIHPVRAFLPQLESRADAAIVCVNSLLASQ-PEPHMVATSAARAGVKNLVRSMAFEFAP 179

Query: 191 DNIRTNSVAPWYIRTPFTEPLLGNGK----------FVDEVKSRTPMGRLGEPKEVSSLV 240
             +R N +    + +          +                 + P+GRLG+P E +  +
Sbjct: 180 KGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAI 239

Query: 241 AFLCMPAASYITGQTVCIDGGFTVNG 266
            FL  P ++Y TG  + + GG + + 
Sbjct: 240 LFLASPLSAYTTGSHIDVSGGLSRHA 265

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score =  227 bits (580), Expect = 6e-74
 Identities = 72/254 (28%), Positives = 113/254 (44%), Gaps = 6/254 (2%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK-GLKVTGSV 75
           S QG  A +TGG  GLG  +   LS LGA     SR    L      +  + G KV    
Sbjct: 23  SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQ 82

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
           CDV      Q  ++ +  +  G  NI +NN   + + PT   +   +  +          
Sbjct: 83  CDVRDPDMVQNTVSELIKVA-GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAF 141

Query: 136 LCQ-LAHPLLRASGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEWAKDNI 193
           +   +   L++A   A+ + +++     + +   V  ++ K  +  ++K+LA EW K  +
Sbjct: 142 VTLEIGKQLIKAQKGAAFLSITTIYA-ETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGM 200

Query: 194 RTNSVAPWYIRTPFTEPLLG-NGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT 252
           R N + P  I+T      L   G F  E+  R P GRLG  +E+++L AFLC   AS+I 
Sbjct: 201 RFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWIN 260

Query: 253 GQTVCIDGGFTVNG 266
           G  +  DGG  V  
Sbjct: 261 GAVIKFDGGEEVLI 274

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score =  226 bits (579), Expect = 8e-74
 Identities = 86/277 (31%), Positives = 128/277 (46%), Gaps = 13/277 (4%)

Query: 1   MAQPQQTESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNEC 60
           MA   +  S+       LQG  A+VTGG  G+G A+V+EL  LG+ V   SR    L   
Sbjct: 1   MASWAKGRSYLAPG--LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSA 58

Query: 61  I-----HHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTL 115
                 +    K  +V    C++ +  +   L+ +    F GK+N  VNN G   L P  
Sbjct: 59  ADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTF-GKINFLVNNGGGQFLSPAE 117

Query: 116 EYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTV-YSATK 174
             +++ +  V+ TN    F++C+  +         SIV +       +     V   A +
Sbjct: 118 HISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVP--TKAGFPLAVHSGAAR 175

Query: 175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG--NGKFVDEVKSRTPMGRLGE 232
             +  L K+LA EWA   IR N VAP  I +       G     F +    + P  R+G 
Sbjct: 176 AGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGV 235

Query: 233 PKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNGFFF 269
           P+EVSS+V FL  PAAS+ITGQ+V +DGG ++    +
Sbjct: 236 PEEVSSVVCFLLSPAASFITGQSVDVDGGRSLYTHSY 272

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  225 bits (575), Expect = 9e-74
 Identities = 73/259 (28%), Positives = 114/259 (44%), Gaps = 14/259 (5%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK-GLKVTGSV 75
            + G  A++TG + G+GLA+ E  +  GA +   +R    L+E    L+ K G++V    
Sbjct: 4   GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVA 63

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
            DV++      ++ +V S F G  +I VNN GT   +  +E   E +         +A  
Sbjct: 64  VDVATPEGVDAVVESVRSSF-GGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVR 122

Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAKDNIR 194
           L +   P +RA G  +I+  +S   +        +Y+ TK A+   +K LA E  KDNIR
Sbjct: 123 LARGLVPGMRARGGGAIIHNASICAVQ-PLWYEPIYNVTKAALMMFSKTLATEVIKDNIR 181

Query: 195 TNSVAPWYIRTPFTEPLL-----GNGKFVDEV-----KSRTPMGRLGEPKEVSSLVAFLC 244
            N + P  I TP            NG               P+ R   P+E+++   FLC
Sbjct: 182 VNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFLC 241

Query: 245 MPAASYITGQTVCIDGGFT 263
              A+Y  G    +DGG  
Sbjct: 242 SERATYSVGSAYFVDGGML 260

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score =  223 bits (570), Expect = 4e-73
 Identities = 79/256 (30%), Positives = 125/256 (48%), Gaps = 5/256 (1%)

Query: 9   SHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG 68
           S S ++ + L    A+VTG   G+G A+    +  GA+V                ++  G
Sbjct: 1   SMSYESPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAG 60

Query: 69  LKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMST 128
            K  G  C+V+    R+ +I      F GK+ + VNN G    KP  +    DF      
Sbjct: 61  GKAIGLECNVTDEQHREAVIKAALDQF-GKITVLVNNAGGGGPKP-FDMPMSDFEWAFKL 118

Query: 129 NFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACE 187
           N  S F L QLA P ++ +G  +I+ +SS  G    NV    Y ++K A+N L +N+A +
Sbjct: 119 NLFSLFRLSQLAAPHMQKAGGGAILNISSMAGEN-TNVRMASYGSSKAAVNHLTRNIAFD 177

Query: 188 WAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA 247
                IR N++AP  I+T     +L   +    +   TP+GRLGE +++++   FLC PA
Sbjct: 178 VGPMGIRVNAIAPGAIKTDALATVL-TPEIERAMLKHTPLGRLGEAQDIANAALFLCSPA 236

Query: 248 ASYITGQTVCIDGGFT 263
           A++I+GQ + + GG  
Sbjct: 237 AAWISGQVLTVSGGGV 252

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  223 bits (571), Expect = 6e-73
 Identities = 66/251 (26%), Positives = 108/251 (43%), Gaps = 11/251 (4%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L    A++TG T G+GLA  +     GA V    R +  L+  I  +   G    G   D
Sbjct: 27  LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---GGGAVGIQAD 83

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
            ++  +   L   V +   G++++   N G   + P  E   E +      N +      
Sbjct: 84  SANLAELDRLYEKVKAEA-GRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTV 142

Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNS 197
           Q A PLL      S+VL  S  G       +VY+A+K A+   A+N   +     IR N+
Sbjct: 143 QKALPLLARGS--SVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKDRGIRINT 200

Query: 198 VAPWYIRTPFTEPLLGNG-----KFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT 252
           ++P    T     L G         ++ + ++ PMGR+G  +EV++   FL    +S++T
Sbjct: 201 LSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFLASDDSSFVT 260

Query: 253 GQTVCIDGGFT 263
           G  + +DGG  
Sbjct: 261 GAELFVDGGSA 271

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score =  222 bits (568), Expect = 1e-72
 Identities = 77/257 (29%), Positives = 122/257 (47%), Gaps = 12/257 (4%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK-GLKVTGSV 75
           S    T +VTGG +G+GLA    ++  GA V    R+  +  E    +  + G+K     
Sbjct: 11  SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQ 70

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
           CDVS+       I  + +   G ++  + N G SV+KP  E   EDF+ V   N    F+
Sbjct: 71  CDVSNTDIVTKTIQQIDADL-GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFN 129

Query: 136 LCQ-LAHPLLRASGAASIVLMSSALGIV------SANVG-TVYSATKGAMNQLAKNLACE 187
            C+ +A   L+     SIV+ SS    +      + ++    Y+++K A + L K LA E
Sbjct: 130 TCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAE 189

Query: 188 WAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA 247
           WA   IR N+++P Y+ T  T  +  + K  D   S  P+ R  +P+E++     L    
Sbjct: 190 WASAGIRVNALSPGYVNTDQTAHM--DKKIRDHQASNIPLNRFAQPEEMTGQAILLLSDH 247

Query: 248 ASYITGQTVCIDGGFTV 264
           A+Y+TG    IDGG  +
Sbjct: 248 ATYMTGGEYFIDGGQLI 264

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score =  222 bits (567), Expect = 2e-72
 Identities = 67/251 (26%), Positives = 120/251 (47%), Gaps = 8/251 (3%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L     +VTGG  G+G A  E  +  GA V      E       + +   G K  G   D
Sbjct: 25  LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI---GSKAFGVRVD 81

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           VSS    ++++   ++ + G++++ VNN G       +    E +  +MS N +  F   
Sbjct: 82  VSSAKDAESMVEKTTAKW-GRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCS 140

Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNS 197
           +   P++R +G  SI+  +S     +    T Y A+KGA++ L + +A + AK+ IR N+
Sbjct: 141 KYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAMAMDHAKEGIRVNA 200

Query: 198 VAPWYIRTPFTEPLLGNGKFVDEVK----SRTPMGRLGEPKEVSSLVAFLCMPAASYITG 253
           VAP  I +P+   +    K   +++    +R  M R+G  +E++  + FL    + + TG
Sbjct: 201 VAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFLASDRSRFATG 260

Query: 254 QTVCIDGGFTV 264
             + +DGG ++
Sbjct: 261 SILTVDGGSSI 271

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  221 bits (565), Expect = 3e-72
 Identities = 55/254 (21%), Positives = 99/254 (38%), Gaps = 12/254 (4%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L     +++G    LG  +    +  GA +   +RT   L +    +   G +      D
Sbjct: 9   LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTD 68

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVG-TSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           ++   Q   L++     + G++++ +NN      +KP      E     +      A  L
Sbjct: 69  ITDDAQVAHLVDETMKAY-GRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRL 127

Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTN 196
            Q   P L  S   ++V ++S +   S      Y   K A+  +++ LA E  +  IR N
Sbjct: 128 IQGFTPALEESKG-AVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGIRVN 186

Query: 197 SVAPWYIRTPFTEPLLGNG---------KFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA 247
           SV P YI     +    +             +   + + + RL    EV+S + F+    
Sbjct: 187 SVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAILFMASDL 246

Query: 248 ASYITGQTVCIDGG 261
           AS ITGQ + ++ G
Sbjct: 247 ASGITGQALDVNCG 260

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score =  221 bits (565), Expect = 6e-72
 Identities = 63/252 (25%), Positives = 105/252 (41%), Gaps = 5/252 (1%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHL-QMKGLKVTGSVC 76
           L+   A +TGG  G+G  + E     G      SR+   +      L    G +      
Sbjct: 25  LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSM 84

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           DV + P     ++     F G+++I +N    + L P    +   F  VM  +    F++
Sbjct: 85  DVRAPPAVMAAVDQALKEF-GRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNV 143

Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEWAKDNIRT 195
            ++ +          IV +++ LG        V   + K A++ + ++LA EW   NIR 
Sbjct: 144 SRVLYEKFFRDHGGVIVNITATLG-NRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRV 202

Query: 196 NSVAPWYIRTP-FTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ 254
           NS+AP  I        L G    +    + +P+ RLG   E++  V +L  P ASY+TG 
Sbjct: 203 NSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLYLASPLASYVTGA 262

Query: 255 TVCIDGGFTVNG 266
            +  DGG  +  
Sbjct: 263 VLVADGGAWLTF 274

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  218 bits (559), Expect = 2e-71
 Identities = 63/251 (25%), Positives = 114/251 (45%), Gaps = 4/251 (1%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           SL+    +VTG   G+G A+ ++ ++  + V      E  LN+ +  L+  G +V G   
Sbjct: 4   SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKA 63

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVG-TSVLKPTLEYNAEDFSLVMSTNFESAFH 135
           DVS +   +  +      +  ++++  NN G    + P  E + E +  V++ N  SAF+
Sbjct: 64  DVSKKKDVEEFVRRTFETY-SRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFY 122

Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRT 195
             +   P++   G   IV  +S  GI     G  Y+  K  +  L +++A  +    IR 
Sbjct: 123 SSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRA 182

Query: 196 NSVAPWYIRTPFTEPLLGN--GKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG 253
            +V P  ++T                  K  +   RL EP+++++++ FL    AS++ G
Sbjct: 183 VAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASDEASFVNG 242

Query: 254 QTVCIDGGFTV 264
             V +DGG TV
Sbjct: 243 DAVVVDGGLTV 253

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =  219 bits (560), Expect = 3e-71
 Identities = 66/252 (26%), Positives = 104/252 (41%), Gaps = 5/252 (1%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L+G  A+VTG + G+G A     +  GA V   +R    L E    +   G +      D
Sbjct: 6   LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGD 65

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVG-TSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           V      + L+      F G L+   NN G    +      + E +   + TN  SAF  
Sbjct: 66  VGDEALHEALVELAVRRF-GGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLA 124

Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAKDNIRT 195
            +   P + A G  S+   SS +G  +   G   Y+A+K  +  L + LA E     IR 
Sbjct: 125 AKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGIRV 184

Query: 196 NSVAPWYIRTPFTEPLLGNG--KFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG 253
           N++ P    TP     L     +    V+    + R+  P+E++    +L    AS++TG
Sbjct: 185 NALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLASDGASFVTG 244

Query: 254 QTVCIDGGFTVN 265
             +  DGG +V 
Sbjct: 245 AALLADGGASVT 256

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score =  218 bits (557), Expect = 3e-71
 Identities = 66/252 (26%), Positives = 111/252 (44%), Gaps = 15/252 (5%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L G   ++T   +G+G A     +  GA V      E++L E       K   +   V D
Sbjct: 4   LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-----KYPGIQTRVLD 58

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           V+ + Q     N V      +L++  N  G       L+   +D+   M+ N  S + + 
Sbjct: 59  VTKKKQIDQFANEV-----ERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMI 113

Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAKDNIRTN 196
           +   P + A  + +I+ MSS    V   V   VYS TK A+  L K++A ++ +  IR N
Sbjct: 114 KAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCN 173

Query: 197 SVAPWYIRTPFTEPLLGNGKFVDEVK----SRTPMGRLGEPKEVSSLVAFLCMPAASYIT 252
            V P  + TP  +  +      +E +     R   GR    +E++ L  +L    ++Y+T
Sbjct: 174 CVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVT 233

Query: 253 GQTVCIDGGFTV 264
           G  V IDGG+++
Sbjct: 234 GNPVIIDGGWSL 245

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score =  217 bits (556), Expect = 4e-71
 Identities = 71/248 (28%), Positives = 108/248 (43%), Gaps = 5/248 (2%)

Query: 20  GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHL-QMKGLKVTGSVCDV 78
              A+VTG + G GLA+       G  V     +   L E           KV     DV
Sbjct: 2   SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADV 61

Query: 79  SSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLK---PTLEYNAEDFSLVMSTNFESAFH 135
           +        I      F G +++ VNN G +             E F  VM+ N    F 
Sbjct: 62  ADEGDVNAAIAATMEQF-GAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFL 120

Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRT 195
            C+   P +   GA  IV ++S   +V+    + Y+ +KGA+ QL K++A ++A   IR 
Sbjct: 121 GCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRC 180

Query: 196 NSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT 255
           N+V P  I TP T+  L   +  D+V +R P   +G   +V+  V FL    A+Y+ G  
Sbjct: 181 NAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMFLAGEDATYVNGAA 240

Query: 256 VCIDGGFT 263
           + +DG +T
Sbjct: 241 LVMDGAYT 248

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score =  218 bits (557), Expect = 4e-71
 Identities = 67/259 (25%), Positives = 109/259 (42%), Gaps = 16/259 (6%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
             G   LVTG    +GLA    L+  G  +         L +    ++ KG++    VCD
Sbjct: 5   FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCD 64

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVG-TSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           V+S       +++V   F GK++   NN G      P  +Y ++DF+ V++ N   AFH+
Sbjct: 65  VTSEEAVIGTVDSVVRDF-GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHV 123

Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTN 196
            +     +       IV  +S  G+        Y  +KGA+  L +  A + A  NIR N
Sbjct: 124 LKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVN 183

Query: 197 SVAPWYIRTPFTEPLLGNG--------------KFVDEVKSRTPMGRLGEPKEVSSLVAF 242
           +++P Y+   F                          ++    PM R G+  E+  +VAF
Sbjct: 184 AISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAF 243

Query: 243 LCMPAASYITGQTVCIDGG 261
           L    +S++TG  + I GG
Sbjct: 244 LLGDDSSFMTGVNLPIAGG 262

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score =  217 bits (556), Expect = 5e-71
 Identities = 71/249 (28%), Positives = 120/249 (48%), Gaps = 6/249 (2%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L G  A++TGGT G+GLA+  +    GA V    R      +    +     ++     D
Sbjct: 4   LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD-QIQFFQHD 62

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
            S       L +     F G ++  VNN G +V K   E    ++  +++ N +  F   
Sbjct: 63  SSDEDGWTKLFDATEKAF-GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGT 121

Query: 138 QLAHPLLRASGA-ASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWA--KDNIR 194
           +L    ++  G  ASI+ MSS  G V       Y+A+KGA+  ++K+ A + A    ++R
Sbjct: 122 RLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVR 181

Query: 195 TNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ 254
            N+V P YI+TP  + L G  +     +++TPMG +GEP +++ +  +L    + + TG 
Sbjct: 182 VNTVHPGYIKTPLVDDLPGAEE-AMSQRTKTPMGHIGEPNDIAYICVYLASNESKFATGS 240

Query: 255 TVCIDGGFT 263
              +DGG+T
Sbjct: 241 EFVVDGGYT 249

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score =  217 bits (556), Expect = 9e-71
 Identities = 78/263 (29%), Positives = 119/263 (45%), Gaps = 17/263 (6%)

Query: 7   TESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQM 66
           TE+   Q+    +G  ALVTG   G+G AVV  L   GA V    R    +   +H    
Sbjct: 15  TENLYFQSMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADLHL--- 71

Query: 67  KGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVM 126
                     D+        L   V++   G+L+I VNN G        E    D+SL +
Sbjct: 72  --------PGDLREAAYADGLPGAVAAGL-GRLDIVVNNAGVISRGRITETTDADWSLSL 122

Query: 127 STNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLAC 186
             N E+ F +C+ A PL+ A+G  +IV ++S  G+       +Y  TK A+  L + +  
Sbjct: 123 GVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCMGM 182

Query: 187 EWAKDNIRTNSVAPWYIRTPFTEPLLGNG-----KFVDEVKSRTPMGRLGEPKEVSSLVA 241
           + A   IR N+V P  + TP              + V E+    P+GR+ EP++++ +V 
Sbjct: 183 DHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVL 242

Query: 242 FLCMPAASYITGQTVCIDGGFTV 264
           FL   AA Y+ G  V ++GG  V
Sbjct: 243 FLASDAARYLCGSLVEVNGGKAV 265

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score =  217 bits (555), Expect = 1e-70
 Identities = 71/250 (28%), Positives = 120/250 (48%), Gaps = 5/250 (2%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVH-TCSRTETELNECIHHLQMKGLKVTGSVC 76
           L+G   ++TG + GLG ++    +   A V       E E N  +  ++  G +      
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           DV+       L+ +    F GKL++ +NN G      + E +  D++ V+ TN   AF  
Sbjct: 65  DVTVESDVINLVQSAIKEF-GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLG 123

Query: 137 CQLAHPLLRASGAA-SIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAKDNIR 194
            + A      +    +++ MSS    +        Y+A+KG M  + + LA E+A   IR
Sbjct: 124 SREAIKYFVENDIKGTVINMSSVHEKI-PWPLFVHYAASKGGMKLMTETLALEYAPKGIR 182

Query: 195 TNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ 254
            N++ P  I TP       + +   +V+S  PMG +GEP+E++++ A+L    ASY+TG 
Sbjct: 183 VNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTGI 242

Query: 255 TVCIDGGFTV 264
           T+  DGG T+
Sbjct: 243 TLFADGGMTL 252

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score =  216 bits (554), Expect = 1e-70
 Identities = 76/252 (30%), Positives = 110/252 (43%), Gaps = 9/252 (3%)

Query: 14  NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTG 73
           N   L G T ++TGG +GLG     +    GA V      + E       L   G     
Sbjct: 1   ND--LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARY 55

Query: 74  SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESA 133
              DV+     Q ++      F G ++  VNN G S        + E F  V+  N    
Sbjct: 56  QHLDVTIEEDWQRVVAYAREEF-GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGV 114

Query: 134 FHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNI 193
           F   +   P ++ +G  SIV +SSA G++   + + Y A+K  +  L+K  A E   D I
Sbjct: 115 FIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRI 174

Query: 194 RTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLG-EPKEVSSLVAFLCMPAASYIT 252
           R NSV P    TP T       +  +     TPMGR+G EP E++  V  L    +SY+T
Sbjct: 175 RVNSVHPGMTYTPMTAET--GIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVT 232

Query: 253 GQTVCIDGGFTV 264
           G  + +DGG+T 
Sbjct: 233 GAELAVDGGWTT 244

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score =  217 bits (555), Expect = 1e-70
 Identities = 68/246 (27%), Positives = 113/246 (45%), Gaps = 4/246 (1%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVH-TCSRTETELNECIHHLQMKGLKVTGSVC 76
            Q   ALVTG ++G+G A    L+  G  +    +R++    E    ++  G+KV     
Sbjct: 2   EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKA 61

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           +V    + + +   +   F G+L++FVNN  + VL+P +E     +   M+ N ++    
Sbjct: 62  NVGQPAKIKEMFQQIDETF-GRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFC 120

Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAKDNIRT 195
            Q A  L+  +G   IV +SS   I       T    +K A+  L + LA E +   I  
Sbjct: 121 AQEAAKLMEKNGGGHIVSISSLGSIR-YLENYTTVGVSKAALEALTRYLAVELSPKQIIV 179

Query: 196 NSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT 255
           N+V+   I T   +        +++ +  TP GR+ E K++   V FL    A  I GQT
Sbjct: 180 NAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSKADMIRGQT 239

Query: 256 VCIDGG 261
           + +DGG
Sbjct: 240 IIVDGG 245

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score =  217 bits (556), Expect = 1e-70
 Identities = 71/268 (26%), Positives = 110/268 (41%), Gaps = 14/268 (5%)

Query: 1   MAQPQQTESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNEC 60
             Q   + +H       L G  A+VTG   G+GLAV   L+  G  V          +  
Sbjct: 15  QTQGPGSMNHPD-----LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAA 69

Query: 61  IHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAE 120
              +   G        DVS   Q   +++   + F G ++  V N G   L   ++   E
Sbjct: 70  ATKI---GCGAAACRVDVSDEQQIIAMVDACVAAF-GGVDKLVANAGVVHLASLIDTTVE 125

Query: 121 DFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQL 180
           DF  V++ N   A+   + A P +   G  +IV +SS  G V+      Y  +K  + QL
Sbjct: 126 DFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQL 185

Query: 181 AKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN-----GKFVDEVKSRTPMGRLGEPKE 235
           ++  A E     IR+N++ P ++ TP  +  +       G            GR+  P+E
Sbjct: 186 SRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEE 245

Query: 236 VSSLVAFLCMPAASYITGQTVCIDGGFT 263
           ++ +V FL    AS ITG T   DGG  
Sbjct: 246 MAGIVVFLLSDDASMITGTTQIADGGTI 273

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score =  216 bits (553), Expect = 3e-70
 Identities = 72/248 (29%), Positives = 117/248 (47%), Gaps = 7/248 (2%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L+   A++TG   G+GL     L+  GA V      ET+L      +   G      V D
Sbjct: 9   LENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV---GRGAVHHVVD 65

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLK--PTLEYNAEDFSLVMSTNFESAFH 135
           +++    + LI+     F G+L+I  NN   S        +   + +    + N      
Sbjct: 66  LTNEVSVRALIDFTIDTF-GRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTML 124

Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRT 195
           +C+ A P L ++G  +IV +SSA    + ++ T Y+ TK A+  L + +A ++ +  +R 
Sbjct: 125 MCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRC 184

Query: 196 NSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT 255
           N++AP  +RTP  E  L     VD   +    GR+GEP E++ LV FL    A++ITGQ 
Sbjct: 185 NAIAPGLVRTPRLEVGL-PQPIVDIFATHHLAGRIGEPHEIAELVCFLASDRAAFITGQV 243

Query: 256 VCIDGGFT 263
           +  D G  
Sbjct: 244 IAADSGLL 251

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  216 bits (553), Expect = 4e-70
 Identities = 69/267 (25%), Positives = 118/267 (44%), Gaps = 19/267 (7%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGL---KVTGS 74
               T ++TG + G+G       +  GA V    R+   L E    +   G+   +V   
Sbjct: 4   FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSV 63

Query: 75  VCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVG----TSVLKPTLEYNAEDFSLVMSTNF 130
           V DV++   +  +IN+    F GK+++ VNN G     +      +   + +   +  N 
Sbjct: 64  VADVTTEDGQDQIINSTLKQF-GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNL 122

Query: 131 ESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWA 189
           ++   + +   P L AS    IV +SS +    A      Y+  K A++Q  ++ A + A
Sbjct: 123 QAVIEMTKKVKPHLVASKG-EIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLA 181

Query: 190 KDNIRTNSVAPWYIRTPFTEPLLGN-------GKFVDEVKSRTPMGRLGEPKEVSSLVAF 242
           K  IR NSV+P  + T FT  +            F+   K   P+G  G+P+ +++++ F
Sbjct: 182 KFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILF 241

Query: 243 LCMPAAS-YITGQTVCIDGGFT-VNGF 267
           L     S YI GQ++  DGG + V G 
Sbjct: 242 LADRNLSFYILGQSIVADGGTSLVMGT 268

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  216 bits (553), Expect = 4e-70
 Identities = 70/263 (26%), Positives = 117/263 (44%), Gaps = 18/263 (6%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGL---KVTGS 74
                A++TG + G+G A     +  GA V    R    L E    +   G+    V   
Sbjct: 4   FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSV 63

Query: 75  VCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVG----TSVLKPTLEYNAEDFSLVMSTNF 130
           V DV++   +  +++T    F GKL+I VNN G     S  K     + E +   ++ N 
Sbjct: 64  VADVTTDAGQDEILSTTLGKF-GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNL 122

Query: 131 ESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWA 189
            S   L + A P L ++    IV +SS    + A      YS  K A++Q  +N A +  
Sbjct: 123 RSVIALTKKAVPHLSSTKG-EIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLI 181

Query: 190 KDNIRTNSVAPWYIRTPFTEPLLGN-------GKFVDEVKSRTPMGRLGEPKEVSSLVAF 242
           +  IR NS++P  + T F   +             +  +K   P G +G+P++++ ++AF
Sbjct: 182 QHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAF 241

Query: 243 LC-MPAASYITGQTVCIDGGFTV 264
           L     +SYI G  + +DGG ++
Sbjct: 242 LADRKTSSYIIGHQLVVDGGSSL 264

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  215 bits (550), Expect = 6e-70
 Identities = 78/250 (31%), Positives = 107/250 (42%), Gaps = 11/250 (4%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
            QG  A+V GGT G+GLA V  L   GA V    R E+ +          G +V     D
Sbjct: 6   YQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---GPRVHALRSD 62

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           ++   +   L         G +++   N G S L+P  + +   +    + N + AF   
Sbjct: 63  IADLNEIAVLGAAAGQTL-GAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTV 121

Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNS 197
           Q   PL+R  G  SIV  SS          +VYSA+K A+   A  LA E     IR NS
Sbjct: 122 QRLTPLIREGG--SIVFTSSVADEGGHPGMSVYSASKAALVSFASVLAAELLPRGIRVNS 179

Query: 198 VAPWYIRTPFTEPLLGNGKFVDEVK----SRTPMGRLGEPKEVSSLVAFLCMPAASYITG 253
           V+P +I TP             E K    + TPM R G   EV+  V FL    A++ TG
Sbjct: 180 VSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFLAFE-ATFTTG 238

Query: 254 QTVCIDGGFT 263
             + +DGG  
Sbjct: 239 AKLAVDGGLG 248

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score =  215 bits (549), Expect = 8e-70
 Identities = 66/250 (26%), Positives = 109/250 (43%), Gaps = 11/250 (4%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
             G   LVTGG +G+G A+ +  +  GA V  C                + +       D
Sbjct: 4   FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVA------EAIGGAFFQVD 57

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           +    +R   +   +    G++++ VNN   +     L     ++  V+  N  +  HL 
Sbjct: 58  LEDERERVRFVEEAAYAL-GRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLS 116

Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNS 197
            LA   +R  G  +IV ++S  G+ +      Y+A+KG +  L ++LA + A   IR N+
Sbjct: 117 ALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNA 176

Query: 198 VAPWYIRTPFTEPLLGNGKFVDEVK----SRTPMGRLGEPKEVSSLVAFLCMPAASYITG 253
           VAP  I T      +      +  +        + RLG+P+EV+  V FL    AS+ITG
Sbjct: 177 VAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITG 236

Query: 254 QTVCIDGGFT 263
             + +DGG T
Sbjct: 237 AILPVDGGMT 246

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  215 bits (550), Expect = 1e-69
 Identities = 76/269 (28%), Positives = 116/269 (43%), Gaps = 11/269 (4%)

Query: 7   TESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQM 66
           TE+   Q+  +     AL+TG   G+G A    L+  G TV    RT TE+ E    +  
Sbjct: 15  TENLYFQSMMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVG 74

Query: 67  KGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVG-TSVLKPTLEYNAEDFSLV 125
            G +      DVS   Q +  +  +   F G L+I V N G   V  P  +    ++   
Sbjct: 75  AGGQAIALEADVSDELQMRNAVRDLVLKF-GHLDIVVANAGINGVWAPIDDLKPFEWDET 133

Query: 126 MSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVS-ANVG-TVYSATKGAMNQLAKN 183
           ++ N    F    L  P L+  G  +IV++SS  G  +    G T Y+ATK A   + + 
Sbjct: 134 IAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQ 193

Query: 184 LACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRT-------PMGRLGEPKEV 236
           LA E  K +IR N+V P  I T  ++      +    +             G+ G  ++V
Sbjct: 194 LALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDV 253

Query: 237 SSLVAFLCMPAASYITGQTVCIDGGFTVN 265
           + L+ FL    A ++TG  V IDGG  + 
Sbjct: 254 AELIRFLVSERARHVTGSPVWIDGGQGLL 282

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  214 bits (548), Expect = 1e-69
 Identities = 73/255 (28%), Positives = 111/255 (43%), Gaps = 10/255 (3%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGL--KVTGSV 75
                 L+TGG  GLG A    L+  GA +     +   L      +       +V  +V
Sbjct: 11  FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTV 70

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVG-TSVLKPTLEYNAEDFSLVMSTNFESAF 134
            DVS   Q +  +   +  F G+++ F NN G      PT  + A +F  V+S N    F
Sbjct: 71  ADVSDEAQVEAYVTATTERF-GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVF 129

Query: 135 HLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIR 194
              +    ++R  G+  +V  +S  GI      + Y+A K  +  L +N A E+ +  IR
Sbjct: 130 LGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIR 189

Query: 195 TNSVAPWYIRTPFTEPLLGNG------KFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAA 248
            N++AP  I TP  E  +         K  +E     P  R GE  E++++VAFL    A
Sbjct: 190 INAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDA 249

Query: 249 SYITGQTVCIDGGFT 263
           SY+    V IDGG +
Sbjct: 250 SYVNATVVPIDGGQS 264

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  215 bits (550), Expect = 2e-69
 Identities = 71/265 (26%), Positives = 120/265 (45%), Gaps = 17/265 (6%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLK---VTGS 74
             G + ++TG + G+G +     +  GA V    R E  L E    +   G+    +   
Sbjct: 24  FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAV 83

Query: 75  VCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTL--EYNAEDFSLVMSTNFES 132
           V DV+    +  +INT  + F GK++I VNN G ++   T   +   E +      NF++
Sbjct: 84  VADVTEASGQDDIINTTLAKF-GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQA 142

Query: 133 AFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAKD 191
              + Q     L  +    IV +SS +    A+ G   Y+  K A++Q  +  A +  + 
Sbjct: 143 VIEMTQKTKEHLIKTKG-EIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQH 201

Query: 192 NIRTNSVAPWYIRTPFTEPLLGN-------GKFVDEVKSRTPMGRLGEPKEVSSLVAFLC 244
            +R NSV+P  + T F   +            F+   K   P+G  G+P+E+++++ FL 
Sbjct: 202 GVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLA 261

Query: 245 -MPAASYITGQTVCIDGGFT-VNGF 267
               +SYI GQ++  DGG T V G 
Sbjct: 262 DRNLSSYIIGQSIVADGGSTLVMGM 286

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score =  214 bits (547), Expect = 2e-69
 Identities = 76/270 (28%), Positives = 125/270 (46%), Gaps = 12/270 (4%)

Query: 1   MAQPQQTESHSRQNRWSLQGMTALVTG--GTKGLGLAVVEELSMLGATVH-TCSRTETEL 57
           M   Q T+  S  ++ SL+G   +VTG  G KG+G+      + +GA V  T +      
Sbjct: 1   MPGQQATKHESLLDQLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGA 60

Query: 58  NECIHHLQMK-GLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLE 116
            E +  L+   G+K     C V S    + L+  V + F G+++ F+ N G +     L+
Sbjct: 61  EENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVADF-GQIDAFIANAGATADSGILD 119

Query: 117 YNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG---TVYSAT 173
            + E ++ V+  +    FH  +      +  G  S+V+ +S  G + AN     T Y+  
Sbjct: 120 GSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHI-ANFPQEQTSYNVA 178

Query: 174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEP 233
           K     +A++LA EW     R NS++P YI T  ++ +    +      S  PMGR G  
Sbjct: 179 KAGCIHMARSLANEWRD-FARVNSISPGYIDTGLSDFV--PKETQQLWHSMIPMGRDGLA 235

Query: 234 KEVSSLVAFLCMPAASYITGQTVCIDGGFT 263
           KE+     +    A++Y TG  + IDGG+T
Sbjct: 236 KELKGAYVYFASDASTYTTGADLLIDGGYT 265

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score =  213 bits (545), Expect = 2e-69
 Identities = 60/250 (24%), Positives = 102/250 (40%), Gaps = 16/250 (6%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
           TA+VT      G+     LS  G TV     +  + +E      ++    T       S 
Sbjct: 3   TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDE------LEAFAETYPQLKPMSE 56

Query: 82  PQRQTLINTVSSLFNGKLNIFVNNVG-TSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLA 140
            +   LI  V+S + G++++ V+N       +P  +Y  ED+   +       F L    
Sbjct: 57  QEPAELIEAVTSAY-GQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAV 115

Query: 141 HPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAKDNIRTNSVA 199
              ++   +  I+ ++SA          + Y++ +     LA  L+ E  + NI   ++ 
Sbjct: 116 ASQMKKRKSGHIIFITSATP-FGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIG 174

Query: 200 PWYIRTPFTEPLL------GNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG 253
           P Y+ +  +           N + V  VK  T + RLG  KE+  LVAFL   +  Y+TG
Sbjct: 175 PNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLTG 234

Query: 254 QTVCIDGGFT 263
           Q   + GGF 
Sbjct: 235 QVFWLAGGFP 244

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score =  213 bits (546), Expect = 3e-69
 Identities = 68/257 (26%), Positives = 107/257 (41%), Gaps = 11/257 (4%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           SL+G  AL+TG   G G  + +  +  GA V    R +         +   G        
Sbjct: 6   SLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI---GDAALAVAA 62

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVG-TSVLKPTLEYNAEDFSLVMSTNFESAFH 135
           D+S        +    S F GK++I VNN G     +       E+F  ++  N    + 
Sbjct: 63  DISKEADVDAAVEAALSKF-GKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYL 121

Query: 136 LCQLAHPLLRASG----AASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKD 191
           +     P  + +G       I+ ++S            Y+ATKG +  + K LA E A  
Sbjct: 122 MTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAPA 181

Query: 192 NIRTNSVAPWYIRTPFTEPLLGNG--KFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAAS 249
            IR  ++ P    TP     +G    +   + +   PMGRL +P +++   AFLC P AS
Sbjct: 182 KIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCSPQAS 241

Query: 250 YITGQTVCIDGGFTVNG 266
            ITG  + +DGG ++ G
Sbjct: 242 MITGVALDVDGGRSIGG 258

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score =  213 bits (545), Expect = 4e-69
 Identities = 69/255 (27%), Positives = 118/255 (46%), Gaps = 21/255 (8%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
                A+VTGG+ G+GLAVV+ L   GA V + S  E        H +           D
Sbjct: 12  FTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFK----------ID 61

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           V++  + +  +   +  + G+++I VNN G     P      E +  ++  N   ++ + 
Sbjct: 62  VTNEEEVKEAVEKTTKKY-GRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMA 120

Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNS 197
           +   P++ A G  SI+ ++S     +      Y  +K A+  L +++A ++A   IR N+
Sbjct: 121 KYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAP-KIRCNA 179

Query: 198 VAPWYIRTPFTEPLLGNG---------KFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAA 248
           V P  I TP                  + ++E   + PMGR+G P+EV+ +VAFL    +
Sbjct: 180 VCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLASDRS 239

Query: 249 SYITGQTVCIDGGFT 263
           S+ITG  + +DGG  
Sbjct: 240 SFITGACLTVDGGLL 254

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score =  210 bits (537), Expect = 5e-68
 Identities = 67/256 (26%), Positives = 113/256 (44%), Gaps = 22/256 (8%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L+    +VTG + G+G A+ E     G+ V   S  +               K     CD
Sbjct: 6   LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----------EAKYDHIECD 54

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           V++  Q +  I+ +   + G +++ VNN G          +  ++  ++  N    ++  
Sbjct: 55  VTNPDQVKASIDHIFKEY-GSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYAS 113

Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNS 197
           + A P +  S   SIV +SS    +     + Y  +K A+  L K++A ++A   +R N+
Sbjct: 114 KFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAP-LLRCNA 172

Query: 198 VAPWYIRTPFTEPLLGNG---------KFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAA 248
           V P  I TP                  K + E     PM R+G+P+EV+S VAFL    A
Sbjct: 173 VCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASREA 232

Query: 249 SYITGQTVCIDGGFTV 264
           S+ITG  + +DGG ++
Sbjct: 233 SFITGTCLYVDGGLSI 248

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score =  210 bits (537), Expect = 6e-68
 Identities = 71/246 (28%), Positives = 111/246 (45%), Gaps = 11/246 (4%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L G  ALV+GG +G+G + V  +   GA V      + E       L            D
Sbjct: 5   LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL---ADAARYVHLD 61

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           V+   Q +  ++T  + F G L++ VNN G   +    +Y   ++  ++  N    F   
Sbjct: 62  VTQPAQWKAAVDTAVTAF-GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGI 120

Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNS 197
           +     ++ +G  SI+ +SS  G+        Y+ATK A+  L K+ A E     IR NS
Sbjct: 121 RAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNS 180

Query: 198 VAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVC 257
           + P  ++TP T+ +        E   +T +GR  EP EVS+LV +L    +SY TG    
Sbjct: 181 IHPGLVKTPMTDWV-------PEDIFQTALGRAAEPVEVSNLVVYLASDESSYSTGAEFV 233

Query: 258 IDGGFT 263
           +DGG  
Sbjct: 234 VDGGTV 239

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  208 bits (531), Expect = 4e-67
 Identities = 70/256 (27%), Positives = 108/256 (42%), Gaps = 13/256 (5%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQ--MKGLKVTGS 74
            +QG  A+VT G+ GLG A   EL+  GA +   SR   +L      +   + G +V   
Sbjct: 4   GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIV 63

Query: 75  VCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAF 134
             D+        L      L  G  +I V + G       +E   ED+         SA 
Sbjct: 64  AGDIREPGDIDRLFEKARDL--GGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAV 121

Query: 135 HLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIR 194
            + + A   +   G   +V + S   +       + +  +  +  + + LA E A   + 
Sbjct: 122 WVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPHGVT 181

Query: 195 TNSVAPWYIRTPFTEPLLGN-----GKFVDEVK----SRTPMGRLGEPKEVSSLVAFLCM 245
            N+V P  I T     L        G  V+E      SR PMGR+G+P+E++S+VAFL  
Sbjct: 182 VNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAFLAS 241

Query: 246 PAASYITGQTVCIDGG 261
             AS+ITG  + +DGG
Sbjct: 242 EKASFITGAVIPVDGG 257

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score =  208 bits (532), Expect = 5e-67
 Identities = 73/265 (27%), Positives = 108/265 (40%), Gaps = 20/265 (7%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L G  AL+TGG  GLG A+V+     GA V    ++   L E        G    G V D
Sbjct: 3   LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH---GGNAVGVVGD 59

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVG-----TSVLKPTLEYNAEDFSLVMSTNFES 132
           V S   ++       + F GK++  + N G     T++     +     F  +   N + 
Sbjct: 60  VRSLQDQKRAAERCLAAF-GKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKG 118

Query: 133 AFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDN 192
             H  +   P L +S   S+V   S  G      G +Y+ATK A+  L + +A E A  +
Sbjct: 119 YIHAVKACLPALVSSRG-SVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELAP-H 176

Query: 193 IRTNSVAPWYIRTPFTEPL--------LGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLC 244
           +R N VAP  + T    P         + +    D +KS  P+GR+   +E +    F  
Sbjct: 177 VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYVFFA 236

Query: 245 MPAAS-YITGQTVCIDGGFTVNGFF 268
               S   TG  +  DGG  V GF 
Sbjct: 237 TRGDSLPATGALLNYDGGMGVRGFL 261

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score =  206 bits (528), Expect = 1e-66
 Identities = 64/252 (25%), Positives = 100/252 (39%), Gaps = 10/252 (3%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
             +    +VTG   G+G A  E L+  GA V                +   G        
Sbjct: 6   RFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAV 65

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVG---TSVLKPTLEYNAEDFSLVMSTNFESA 133
           DVS     + + +   + F G ++  VNN        L   L  + E +   MS N + A
Sbjct: 66  DVSDPESAKAMADRTLAEF-GGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGA 124

Query: 134 FHLCQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAKDN 192
               +  +  +   G  +IV  SS     +A +    Y   K  +N L + L+ E    N
Sbjct: 125 LWCTRAVYKKMTKRGGGAIVNQSS----TAAWLYSNYYGLAKVGINGLTQQLSRELGGRN 180

Query: 193 IRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT 252
           IR N++AP  I T          + VD++    P+ R+G P ++  +  FL    AS+IT
Sbjct: 181 IRINAIAPGPIDTEANRTTT-PKEMVDDIVKGLPLSRMGTPDDLVGMCLFLLSDEASWIT 239

Query: 253 GQTVCIDGGFTV 264
           GQ   +DGG  +
Sbjct: 240 GQIFNVDGGQII 251

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score =  207 bits (528), Expect = 1e-66
 Identities = 66/264 (25%), Positives = 117/264 (44%), Gaps = 21/264 (7%)

Query: 7   TESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQM 66
           TE+   Q+    Q    ++TG ++G+G  +V         V   SR+             
Sbjct: 15  TENLYFQSMMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPS--------- 65

Query: 67  KGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVM 126
               +     D+S       ++      F G+++  VNN G  + KP +E   ED+   +
Sbjct: 66  ADPDIHTVAGDISKPETADRIVREGIERF-GRIDSLVNNAGVFLAKPFVEMTQEDYDHNL 124

Query: 127 STNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGT---VYSATKGAMNQLAKN 183
             N    FH+ Q A   +   G+  IV ++++L      VG    + S TKG +N + ++
Sbjct: 125 GVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQ-PMVGMPSALASLTKGGLNAVTRS 183

Query: 184 LACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFL 243
           LA E+++  +R N+V+P  I+TP         +    +    P+GR+GE ++V   V +L
Sbjct: 184 LAMEFSRSGVRVNAVSPGVIKTPMHPA-----ETHSTLAGLHPVGRMGEIRDVVDAVLYL 238

Query: 244 CMPAASYITGQTVCIDGGFTVNGF 267
               A +ITG+ + +DGG     +
Sbjct: 239 --EHAGFITGEILHVDGGQNAGRW 260

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score =  206 bits (527), Expect = 1e-66
 Identities = 69/257 (26%), Positives = 116/257 (45%), Gaps = 14/257 (5%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           +L+G TALVTG T G+GL + + L+  GA +      +      +  +   G+K      
Sbjct: 1   TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPA--PALAEIARHGVKAVHHPA 58

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           D+S   Q + L       F G ++I VNN G   + P  ++  E +  +++ N  + FH 
Sbjct: 59  DLSDVAQIEALFALAEREF-GGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHG 117

Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAKDNIRT 195
            +LA P +RA     I+ ++S  G+V  + G   Y A K  +  L K +  E A  N+  
Sbjct: 118 TRLALPGMRARNWGRIINIASVHGLV-GSTGKAAYVAAKHGVVGLTKVVGLETATSNVTC 176

Query: 196 NSVAPWYIRTPFTEPLLGNGKFV---------DEVKSRTPMGRLGEPKEVSSLVAFLCMP 246
           N++ P ++ TP  +  + +             D +  + P      P+ +  LV FLC  
Sbjct: 177 NAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSE 236

Query: 247 AASYITGQTVCIDGGFT 263
           A S + G    +DGG+ 
Sbjct: 237 AGSQVRGAAWNVDGGWL 253

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score =  206 bits (526), Expect = 2e-66
 Identities = 63/258 (24%), Positives = 102/258 (39%), Gaps = 14/258 (5%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L+G +AL+TG  +G+G A  E     GATV           +    +   G        D
Sbjct: 6   LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI---GPAAYAVQMD 62

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           V+ +      I        G L+I VNN     L P +E   E +  + + N        
Sbjct: 63  VTRQDSIDAAIAATVEHA-GGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTL 121

Query: 138 QLAHPLLRASGAA-SIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTN 196
           Q A   + A G    I+ M+S  G     +  +Y ATK A+  L ++   +  K  I  N
Sbjct: 122 QAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRINVN 181

Query: 197 SVAPWYIRTPFTEPL---------LGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA 247
           ++AP  +     + +            G+    V    P GR+G  ++++ +  FL    
Sbjct: 182 AIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFLASAE 241

Query: 248 ASYITGQTVCIDGGFTVN 265
           + YI  QT  +DGG  ++
Sbjct: 242 SDYIVSQTYNVDGGNWMS 259

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score =  205 bits (525), Expect = 2e-66
 Identities = 78/254 (30%), Positives = 108/254 (42%), Gaps = 10/254 (3%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           LQG  ALVTGG  G+GL VV+ L   GA V      E    +    L   G +      D
Sbjct: 4   LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHD 60

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           VSS      ++  V     G LN+ VNN G  +         EDFS ++  N ES F  C
Sbjct: 61  VSSEADWTLVMAAVQRRL-GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGC 119

Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDN--IRT 195
           Q     ++ +G  SI+ M+S    +       YSA+K A++ L +  A    K    IR 
Sbjct: 120 QQGIAAMKETGG-SIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRV 178

Query: 196 NSVAPWYIRTPFTEPLLGNG---KFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT 252
           NS+ P  I TP  +  L  G   + V         GR   P+ ++ LV FL    +S ++
Sbjct: 179 NSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMS 238

Query: 253 GQTVCIDGGFTVNG 266
           G  +  D      G
Sbjct: 239 GSELHADNSILGMG 252

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score =  206 bits (526), Expect = 3e-66
 Identities = 72/252 (28%), Positives = 117/252 (46%), Gaps = 12/252 (4%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
             G   +VTGG +G+G  +V      GA V  C + E+        L+ +       +CD
Sbjct: 7   YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRA----LEQELPGAVFILCD 62

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVG-TSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           V+     +TL++     F G+L+  VNN G     +   E +A+ F  ++  N    + L
Sbjct: 63  VTQEDDVKTLVSETIRRF-GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTL 121

Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTN 196
            +LA P LR S   +++ +SS +G +       Y ATKGA+  + K LA + +   +R N
Sbjct: 122 TKLALPYLRKSQG-NVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVN 180

Query: 197 SVAPWYIRTPFTEPLLGNG----KFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT 252
            ++P  I TP  E L          + E     P+GR+G+P EV +   FL    A++ T
Sbjct: 181 CISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-ANFCT 239

Query: 253 GQTVCIDGGFTV 264
           G  + + GG  +
Sbjct: 240 GIELLVTGGAEL 251

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score =  205 bits (524), Expect = 6e-66
 Identities = 74/260 (28%), Positives = 111/260 (42%), Gaps = 16/260 (6%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
            L G  A+VTGG+KG+G A+   L   GATV             +  L+  G  V     
Sbjct: 9   DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAV---EV 65

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           DV+ R      +        G  ++   N G S ++P ++   E++      N    F  
Sbjct: 66  DVTKRASVDAAMQKAIDAL-GGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLA 124

Query: 137 CQLAHPLLRASGAA-SIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAKDNIR 194
            Q+A     AS     IV  +S    V        YSA+K A+    + LA E A  NIR
Sbjct: 125 NQIACRHFLASNTKGVIVNTASLAAKV-GAPLLAHYSASKFAVFGWTQALAREMAPKNIR 183

Query: 195 TNSVAPWYIRTPFTEPLLG---------NGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCM 245
            N V P +++T   E  +                E  S TP+GR+ EP++V+ +V FL  
Sbjct: 184 VNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLAS 243

Query: 246 PAASYITGQTVCIDGGFTVN 265
            AA ++TGQ + + GG  ++
Sbjct: 244 DAARFMTGQGINVTGGVRMD 263

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score =  204 bits (522), Expect = 1e-65
 Identities = 73/262 (27%), Positives = 111/262 (42%), Gaps = 12/262 (4%)

Query: 4   PQQTESHSRQNRWSLQGMTALVTGGT-KGLGLAVVEELSMLGATVHTCSRTETELNECIH 62
           P++ + H       L+G   LVT     G+G        + GA V      E  L E   
Sbjct: 11  PKEIDGHGL-----LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRD 65

Query: 63  HLQMKGL-KVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAED 121
            L   GL +V   VCDV+S      LI        G+L++ VNN G     P ++   E+
Sbjct: 66  QLADLGLGRVEAVVCDVTSTEAVDALITQTVEKA-GRLDVLVNNAGLGGQTPVVDMTDEE 124

Query: 122 FSLVMSTNFESAFHLCQLAHPLLRASGAA-SIVLMSSALGIVSANVG-TVYSATKGAMNQ 179
           +  V++    S     + A    R       IV  +S LG   A    + Y+A K  +  
Sbjct: 125 WDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWR-AQHSQSHYAAAKAGVMA 183

Query: 180 LAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSL 239
           L +  A E  +  +R N+V+P   R  F E    + + +D + S    GR  EP EV++ 
Sbjct: 184 LTRCSAIEAVEFGVRINAVSPSIARHKFLEKTS-SSELLDRLASDEAFGRAAEPWEVAAT 242

Query: 240 VAFLCMPAASYITGQTVCIDGG 261
           +AFL    +SY+TG+ V +   
Sbjct: 243 IAFLASDYSSYMTGEVVSVSSQ 264

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score =  203 bits (518), Expect = 3e-65
 Identities = 56/248 (22%), Positives = 94/248 (37%), Gaps = 15/248 (6%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
            ALVT      G A VE L+  G TV     +  +  E          +         + 
Sbjct: 3   IALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQ------RFESENPGTIALAE 56

Query: 82  PQRQTLINTVSSLFNGKLNIFVNNVG---TSVLKPTLEYNAEDFSLVMSTNFESAFHLCQ 138
            + + L++         ++  V+N          P    +  D   +          L Q
Sbjct: 57  QKPERLVDATLQHG-EAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQ 115

Query: 139 LAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAKDNIRTNS 197
            A   LRA+G AS++ ++S++G         +Y   + A   L ++ A   ++D I   +
Sbjct: 116 SAIAPLRAAGGASVIFITSSVGKK-PLAYNPLYGPARAATVALVESAAKTLSRDGILLYA 174

Query: 198 VAPWYIRTPFTEPL---LGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ 254
           + P +   P   P      N +  + V    P+GRLG P E+ +L+ FL    A+ I GQ
Sbjct: 175 IGPNFFNNPTYFPTSDWENNPELRERVDRDVPLGRLGRPDEMGALITFLASRRAAPIVGQ 234

Query: 255 TVCIDGGF 262
                GG+
Sbjct: 235 FFAFTGGY 242

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score =  203 bits (518), Expect = 3e-65
 Identities = 72/247 (29%), Positives = 111/247 (44%), Gaps = 5/247 (2%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L+   A++TGG  G+G A+ E  ++ GA +           E    ++  G +V    CD
Sbjct: 5   LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNLGRRVLTVKCD 62

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           VS     +     V S F G+ +I VNN G   L P  E   E +      N +S F + 
Sbjct: 63  VSQPGDVEAFGKQVISTF-GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMA 121

Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAKDNIRTN 196
           +   P ++ +G   I+ ++S    +      T Y +TK A     + LA +  KD I  N
Sbjct: 122 KAFVPGMKRNGWGRIINLTSTTYWL-KIEAYTHYISTKAANIGFTRALASDLGKDGITVN 180

Query: 197 SVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTV 256
           ++AP  +RT  TE    +  F         + RL  P +++   AFL    AS+ITGQT+
Sbjct: 181 AIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDASFITGQTL 240

Query: 257 CIDGGFT 263
            +DGG  
Sbjct: 241 AVDGGMV 247

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score =  203 bits (518), Expect = 3e-65
 Identities = 69/259 (26%), Positives = 114/259 (44%), Gaps = 15/259 (5%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHH--LQMKGLKVTGSV 75
           L+G  A+VTG T G+GL +   L+  GA +      +    E +        G+KV    
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
            D+S     + L++       G+++I VNN G        ++  E +  +++ N  + FH
Sbjct: 62  ADLSKGEAVRGLVDNAVRQM-GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFH 120

Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEWAKDNIR 194
               A P ++  G   I+ ++SA G+V A+     Y A K  +    K  A E A   I 
Sbjct: 121 GTAAALPHMKKQGFGRIINIASAHGLV-ASANKSAYVAAKHGVVGFTKVTALETAGQGIT 179

Query: 195 TNSVAPWYIRTPFTEPLLGN-----GKFVDEVK-----SRTPMGRLGEPKEVSSLVAFLC 244
            N++ P ++RTP  E  +       G   +         + P  +   P+++     FL 
Sbjct: 180 ANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLA 239

Query: 245 MPAASYITGQTVCIDGGFT 263
             AA+ ITG TV +DGG+T
Sbjct: 240 SDAAAQITGTTVSVDGGWT 258

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score =  203 bits (518), Expect = 7e-65
 Identities = 68/260 (26%), Positives = 120/260 (46%), Gaps = 15/260 (5%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHL--QMKGLKVTGS 74
           S+   TA++TG T G+GLA+   L+  GA +        +    +      +    V   
Sbjct: 22  SMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHH 81

Query: 75  VCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAF 134
             D++   +   ++  V+  F G  +I VNN G   ++   ++  E +  +++ N  S+F
Sbjct: 82  PADMTKPSEIADMMAMVADRF-GGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSF 140

Query: 135 HLCQLAHPLLRASGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEWAKDNI 193
           H  + A P ++  G   I+ ++SA G+V A+     Y A K  +  L K +A E A+  +
Sbjct: 141 HTIRGAIPPMKKKGWGRIINIASAHGLV-ASPFKSAYVAAKHGIMGLTKTVALEVAESGV 199

Query: 194 RTNSVAPWYIRTPFTEPLLGN-----GKFVDEVK-----SRTPMGRLGEPKEVSSLVAFL 243
             NS+ P Y+ TP  E  + +     G   ++V         P  +    ++V+SL  +L
Sbjct: 200 TVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASLALYL 259

Query: 244 CMPAASYITGQTVCIDGGFT 263
               A+ ITG  V +DGG+T
Sbjct: 260 AGDDAAQITGTHVSMDGGWT 279

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score =  202 bits (516), Expect = 8e-65
 Identities = 73/250 (29%), Positives = 115/250 (46%), Gaps = 11/250 (4%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L G T LVTG   G+G A ++  +  GA++    R E  L E +  L     +    V D
Sbjct: 4   LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL---EAEAIAVVAD 60

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           VS     + +       F G+L+   +  G +    +     E +  V+  N   +F + 
Sbjct: 61  VSDPKAVEAVFAEALEEF-GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVA 119

Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAKDNIRTN 196
           + A  +L   G  S+VL  S  G+     G   Y+A K  +  LA+ LA E A+  +R N
Sbjct: 120 RKAGEVLEEGG--SLVLTGSVAGL--GAFGLAHYAAGKLGVVGLARTLALELARKGVRVN 175

Query: 197 SVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTV 256
            + P  I+TP T  L       ++    +P+GR G P+EV+    FL    ++YITGQ +
Sbjct: 176 VLLPGLIQTPMTAGL--PPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQAL 233

Query: 257 CIDGGFTVNG 266
            +DGG ++ G
Sbjct: 234 YVDGGRSIVG 243

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score =  201 bits (515), Expect = 1e-64
 Identities = 53/251 (21%), Positives = 111/251 (44%), Gaps = 8/251 (3%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATV---HTCSRTETELNECIHHLQMKGLKVTG 73
            L+    ++ GG K LG    +  ++    +   +  ++     N+    L+ +G KV  
Sbjct: 8   DLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVAL 67

Query: 74  SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESA 133
              D+S+  +   L +     F GK++I +N VG  + KP +E +  +F  + + N + A
Sbjct: 68  YQSDLSNEEEVAKLFDFAEKEF-GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVA 126

Query: 134 FHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNI 193
           +   + A   +  +G   I+ ++++L        + Y+  K  +    +  + E  K  I
Sbjct: 127 YFFIKQAAKHMNPNG--HIITIATSLLAAYTGFYSTYAGNKAPVEHYTRAASKELMKQQI 184

Query: 194 RTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG 253
             N++AP  + T F        +     KS+    +L + ++++ ++ FL      +I G
Sbjct: 185 SVNAIAPGPMDTSFFYG-QETKESTAFHKSQAMGNQLTKIEDIAPIIKFLT-TDGWWING 242

Query: 254 QTVCIDGGFTV 264
           QT+  +GG+T 
Sbjct: 243 QTIFANGGYTT 253

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score =  202 bits (515), Expect = 1e-64
 Identities = 77/247 (31%), Positives = 111/247 (44%), Gaps = 5/247 (2%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHL-QMKGLKVTGSV 75
            LQG + +VTGGTKG+G  +    +  GA V    R+  +++ C+  L Q+   KV G  
Sbjct: 7   DLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQ 66

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
            DVS R Q   L       F G +++   N G     P      E  + + + N    F+
Sbjct: 67  TDVSDRAQCDALAGRAVEEF-GGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFY 125

Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEWAKDNIR 194
             Q     L ASG+  +VL SS  G ++   G   Y ATK A     +  A E A   I 
Sbjct: 126 AVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELAPHKIT 185

Query: 195 TNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ 254
            N++ P  I T          +++  +    P G LG P+++  L AFL    A YITGQ
Sbjct: 186 VNAIMPGNIMTEGLLEN--GEEYIASMARSIPAGALGTPEDIGHLAAFLATKEAGYITGQ 243

Query: 255 TVCIDGG 261
            + +DGG
Sbjct: 244 AIAVDGG 250

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score =  200 bits (512), Expect = 2e-64
 Identities = 71/254 (27%), Positives = 112/254 (44%), Gaps = 12/254 (4%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETE-LNECIHHLQMKGLKVTGSV 75
            L+G   L+TG ++G+GLA     +  GA V    R     ++E I  ++  G       
Sbjct: 4   DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFA 63

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVL-KPTLEYNAEDFSLVMSTNFESAF 134
            D+++    Q L++   + F G +++ +NN G  V  KP  E +   +  VM  N  S  
Sbjct: 64  ADLATSEACQQLVDEFVAKF-GGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVV 122

Query: 135 HLCQLAHPLLRASGAA-----SIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEW 188
              + A P L A+  A     +++   S  G      G  +Y A K  ++ + KN     
Sbjct: 123 MTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNWVDFH 182

Query: 189 AKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAA 248
            KD +R N V+P  + T F           D + +  PMGR G  +E++    F     A
Sbjct: 183 TKDGVRFNIVSPGTVDTAFHADK--TQDVRDRISNGIPMGRFGTAEEMAPAFLFFASHLA 240

Query: 249 S-YITGQTVCIDGG 261
           S YITGQ + I+GG
Sbjct: 241 SGYITGQVLDINGG 254

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score =  200 bits (510), Expect = 4e-64
 Identities = 64/259 (24%), Positives = 106/259 (40%), Gaps = 21/259 (8%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
              G    VTG  KG+G A        GA V    +  T+          +       V 
Sbjct: 4   DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ----------EQYPFATEVM 53

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           DV+   Q   +   + +    +L+  VN  G   +  T + + ED+    + N   AF+L
Sbjct: 54  DVADAAQVAQVCQRLLAET-ERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNL 112

Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAKDNIRT 195
            Q      R     +IV ++S        +G + Y A+K A+  LA ++  E A   +R 
Sbjct: 113 FQQTMNQFRRQRGGAIVTVASDAAHT-PRIGMSAYGASKAALKSLALSVGLELAGSGVRC 171

Query: 196 NSVAPWYIRTPFTEPLLGNGK--------FVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA 247
           N V+P    T     L  +          F ++ K   P+G++  P+E+++ + FL    
Sbjct: 172 NVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASDL 231

Query: 248 ASYITGQTVCIDGGFTVNG 266
           AS+IT Q + +DGG T+  
Sbjct: 232 ASHITLQDIVVDGGSTLGA 250

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score =  199 bits (508), Expect = 1e-63
 Identities = 56/271 (20%), Positives = 98/271 (36%), Gaps = 53/271 (19%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
             +++G   G+G A  + L   G  +      + E+                 + D+S+ 
Sbjct: 3   IIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV-----------------IADLSTA 45

Query: 82  PQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAH 141
             R+  I  V +  +  ++  V   G            +    V+S N+  A  L     
Sbjct: 46  EGRKQAIADVLAKCSKGMDGLVLCAGLGP-------QTKVLGNVVSVNYFGATELMDAFL 98

Query: 142 PLLRASG---------------------------AASIVLMSSALGIVSANVG-TVYSAT 173
           P L+                              A       + +       G   Y+ +
Sbjct: 99  PALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGS 158

Query: 174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSR-TPMGRLGE 232
           K A+    +  A  W +  +R N++AP    TP  +  L + ++ + +     PMGR  E
Sbjct: 159 KNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRAE 218

Query: 233 PKEVSSLVAFLCMPAASYITGQTVCIDGGFT 263
           P E++S++AFL  PAASY+ G  + IDGG  
Sbjct: 219 PSEMASVIAFLMSPAASYVHGAQIVIDGGID 249

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score =  198 bits (506), Expect = 2e-63
 Identities = 67/254 (26%), Positives = 99/254 (38%), Gaps = 11/254 (4%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
            ALVTG  +G+G A+   L   G  V      +         +   G        DVS R
Sbjct: 4   VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDR 63

Query: 82  PQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAH 141
            Q    +        G  ++ VNN G +   P      E    V + N +      Q A 
Sbjct: 64  DQVFAAVEQARKTL-GGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAV 122

Query: 142 PLLRASGAA-SIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAP 200
              +  G    I+   S  G V      VYS++K A+  L +  A + A   I  N   P
Sbjct: 123 EAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCP 182

Query: 201 WYIRTPFTEPL---------LGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI 251
             ++TP    +            G    E   R  +GRL EP++V++ V++L  P + Y+
Sbjct: 183 GIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDYM 242

Query: 252 TGQTVCIDGGFTVN 265
           TGQ++ IDGG   N
Sbjct: 243 TGQSLLIDGGMVFN 256

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score =  198 bits (505), Expect = 3e-63
 Identities = 71/259 (27%), Positives = 111/259 (42%), Gaps = 15/259 (5%)

Query: 20  GMTALVTGGTKGLGLAVVEELSMLGATV--HTCSRTETELNECIHHLQMKGLKVTGSVCD 77
              A+VTGG +G+G  + E+L+  G  +      + E +  E I  ++    K      D
Sbjct: 2   SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLD 61

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           V+ +    + I+  +    G  ++ VNN G + +KP LE   ED   + S N  S F   
Sbjct: 62  VTDKANFDSAIDEAAEKL-GGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGI 120

Query: 138 QLAHPLLRASGAA-SIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAKDNIRT 195
           Q A       G    I+  +S   I       + YS TK A+  L +  A E A      
Sbjct: 121 QAASRKFDELGVKGKIINAASIAAIQ-GFPILSAYSTTKFAVRGLTQAAAQELAPKGHTV 179

Query: 196 NSVAPWYIRTPFTEPL---------LGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP 246
           N+ AP  + T   E +            G+   E  S   +GR   P++V+ LV+FL   
Sbjct: 180 NAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFLASE 239

Query: 247 AASYITGQTVCIDGGFTVN 265
            ++Y+TGQ + +DGG   N
Sbjct: 240 NSNYVTGQVMLVDGGMLYN 258

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score =  198 bits (505), Expect = 4e-63
 Identities = 74/264 (28%), Positives = 112/264 (42%), Gaps = 8/264 (3%)

Query: 2   AQPQQTESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVH-TCSRTETELNEC 60
              +     S     SL G TA VTGG++G+G A+ + L++ GA V  T           
Sbjct: 13  LGTENLYFQSMMTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAV 72

Query: 61  IHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAE 120
           +  ++  G +      D       +  I        G L+I VN+ G     P  E    
Sbjct: 73  VSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEAL-GGLDILVNSAGIWHSAPLEETTVA 131

Query: 121 DFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQ 179
           DF  VM+ NF + F   + A   L   G   I+ + S L  +    G ++YSA+K A+  
Sbjct: 132 DFDEVMAVNFRAPFVAIRSASRHLGDGG--RIITIGSNLAELVPWPGISLYSASKAALAG 189

Query: 180 LAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSL 239
           L K LA +     I  N V P    T        +G   +  + R   G  GEP++++ L
Sbjct: 190 LTKGLARDLGPRGITVNIVHPGSTDTDMNP---ADGDHAEAQRERIATGSYGEPQDIAGL 246

Query: 240 VAFLCMPAASYITGQTVCIDGGFT 263
           VA+L  P   ++TG ++ IDGG  
Sbjct: 247 VAWLAGPQGKFVTGASLTIDGGAN 270

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score =  198 bits (505), Expect = 9e-63
 Identities = 77/263 (29%), Positives = 112/263 (42%), Gaps = 5/263 (1%)

Query: 1   MAQPQQTESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNEC 60
           M   +  E   R+  + L   + LVTGGTKG+G  +    +  GA V   +R+  EL+  
Sbjct: 22  MLVVESAEPAERKVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSV 81

Query: 61  IHHL-QMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNA 119
              L ++    V G   DVS          TV   F G L++   N G            
Sbjct: 82  TAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAF-GALDVVCANAGIFPEARLDTMTP 140

Query: 120 EDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMN 178
           E  S V+  N +   +  Q     L ASG   ++L SS  G V+   G + Y A+K A  
Sbjct: 141 EQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQL 200

Query: 179 QLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSS 238
              +  A E A   +  N++ P  I T     +    +++  +    PMG LG P ++  
Sbjct: 201 GFMRTAAIELAPRGVTVNAILPGNILTEGLVDM--GEEYISGMARSIPMGMLGSPVDIGH 258

Query: 239 LVAFLCMPAASYITGQTVCIDGG 261
           L AFL    A YITGQ + +DGG
Sbjct: 259 LAAFLATDEAGYITGQAIVVDGG 281

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score =  197 bits (503), Expect = 1e-62
 Identities = 68/253 (26%), Positives = 113/253 (44%), Gaps = 8/253 (3%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           LQ   A++TGG  G+G    +     GA V      +    +  +++      ++   CD
Sbjct: 14  LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD-VISFVHCD 72

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNN--VGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
           V+     + L++T  +   GKL+I   N  V ++     LE   EDF  VM  N   AF 
Sbjct: 73  VTKDEDVRNLVDTTIAKH-GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFL 131

Query: 136 LCQLAHPLLRASGAASIVLMSSALGIV-SANVGTVYSATKGAMNQLAKNLACEWAKDNIR 194
           + + A  ++  +   SIV  +S         V  VY+ATK A+  L  +L  E  +  IR
Sbjct: 132 VAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIR 191

Query: 195 TNSVAPWYIRTPFTEPLLGNGKFVDE---VKSRTPMGRLGEPKEVSSLVAFLCMPAASYI 251
            N V+P+ + +P    + G      E    ++    G L   ++V+  VA+L    + Y+
Sbjct: 192 VNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYV 251

Query: 252 TGQTVCIDGGFTV 264
           +G  + IDGG+T 
Sbjct: 252 SGLNLVIDGGYTR 264

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  196 bits (500), Expect = 2e-62
 Identities = 59/250 (23%), Positives = 95/250 (38%), Gaps = 16/250 (6%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSV-- 75
           L     LVTG + G+G       +  GATV    R E +L +   H+  +  +       
Sbjct: 10  LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 69

Query: 76  -CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVG-TSVLKPTLEYNAEDFSLVMSTNFESA 133
                +    Q L   ++  +  +L+  ++N G    + P  E N + +  VM  N  + 
Sbjct: 70  DLLTCTSENCQQLAQRIAVNY-PRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNAT 128

Query: 134 FHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNI 193
           F L Q   PLL  S A S+V  SS++G         Y+A+K A   + + LA E+ +  +
Sbjct: 129 FMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQ-RL 187

Query: 194 RTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG 253
           R N + P   RT                       +L  P ++  L  +L    +   TG
Sbjct: 188 RVNCINPGGTRTAMRASAFPT----------EDPQKLKTPADIMPLYLWLMGDDSRRKTG 237

Query: 254 QTVCIDGGFT 263
            T     G  
Sbjct: 238 MTFDAQPGRK 247

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score =  195 bits (499), Expect = 2e-62
 Identities = 63/252 (25%), Positives = 103/252 (40%), Gaps = 8/252 (3%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVH-TCSRTETELNECIHHLQMKGLKVTGSVC 76
               T +V G  + +G A     +  GA V  T +         +  ++  G        
Sbjct: 6   FTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKA 65

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGT-SVLKPTLEYNAEDFSLVMSTNFESAFH 135
           D+++  + +  I+  +  F G+++  V+  G     K   E +   +  V+  N  S F 
Sbjct: 66  DLTNAAEVEAAISAAADKF-GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFL 124

Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAKDNIR 194
             + A P +   G  +IV  SS  G      G   Y+ +KGA+    + LA E     IR
Sbjct: 125 TAKTALPKMAKGG--AIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVGP-KIR 181

Query: 195 TNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ 254
            N+V P  I T F        +  + V   T + R G  ++V+ LVAFL    A+Y+TG 
Sbjct: 182 VNAVCPGMISTTFH-DTFTKPEVRERVAGATSLKREGSSEDVAGLVAFLASDDAAYVTGA 240

Query: 255 TVCIDGGFTVNG 266
              I+GG   + 
Sbjct: 241 CYDINGGVLFSE 252

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score =  195 bits (499), Expect = 3e-62
 Identities = 66/249 (26%), Positives = 109/249 (43%), Gaps = 9/249 (3%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVH-TCSRTETELNECIHHLQMKGLKVTGSV 75
                 A+VTG ++G+G A+   L+  G TV    +       E    ++  G K   + 
Sbjct: 24  METNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQ 83

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
            DVS     + L  T    F G +++ VNN G   L    E     F  V++ N +  F+
Sbjct: 84  ADVSDPAAVRRLFATAEEAF-GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFN 142

Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAKDNIR 194
             + A   LR  G   I+ MS++   +  +    +Y+A K  +  +   L+ E    +I 
Sbjct: 143 TLREAAQRLRVGG--RIINMSTSQVGL-LHPSYGIYAAAKAGVEAMTHVLSKELRGRDIT 199

Query: 195 TNSVAPWYIRTP-FTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG 253
            N+VAP    T  F E    + +  D      P+ RLG P++++  VAFL  P  +++ G
Sbjct: 200 VNAVAPGPTATDLFLEGK--SDEVRDRFAKLAPLERLGTPQDIAGAVAFLAGPDGAWVNG 257

Query: 254 QTVCIDGGF 262
           Q +  +GG 
Sbjct: 258 QVLRANGGI 266

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score =  195 bits (498), Expect = 6e-62
 Identities = 69/261 (26%), Positives = 113/261 (43%), Gaps = 22/261 (8%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLK--VTGS 74
            L+G TALVTG T G+G A+   L   GA V    R E  +NE I  ++ +     +   
Sbjct: 7   QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPV 66

Query: 75  VCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAF 134
           V D+ +    Q +I         K++I +NN+G        +   ED+  +   N  S  
Sbjct: 67  VADLGTEQGCQDVIEKY-----PKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGV 121

Query: 135 HLCQLAHPLLRASGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEWAKDNI 193
            L +     +       ++ ++S   I+  +     YSATK     L+++LA      N+
Sbjct: 122 RLTRSYLKKMIERKEGRVIFIASEAAIM-PSQEMAHYSATKTMQLSLSRSLAELTTGTNV 180

Query: 194 RTNSVAPWYIRTPFTEPLLGNG-------------KFVDEVKSRTPMGRLGEPKEVSSLV 240
             N++ P    T   E +L +              +F+ E +  + + RL  P+E++ LV
Sbjct: 181 TVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIAHLV 240

Query: 241 AFLCMPAASYITGQTVCIDGG 261
            FL  P +S I G  + IDGG
Sbjct: 241 TFLSSPLSSAINGSALRIDGG 261

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score =  195 bits (497), Expect = 8e-62
 Identities = 54/261 (20%), Positives = 96/261 (36%), Gaps = 22/261 (8%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETE-------LNECIHHLQMKGL 69
           +L G T  +TG ++G+GLA+    +  GA V   +++          ++     +   G 
Sbjct: 3   TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGG 62

Query: 70  KVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTN 129
           +     CD+    Q +  +      F G ++I VNN     L+ TL+   + F L+   N
Sbjct: 63  QGLALKCDIREEDQVRAAVAATVDTF-GGIDILVNNASAIWLRGTLDTPMKRFDLMQQVN 121

Query: 130 FESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG--TVYSATKGAMNQLAKNLACE 187
              +F   Q   P L  +    I+ ++    +  A  G  T Y+  K  M+ +   LA E
Sbjct: 122 ARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTLGLAAE 181

Query: 188 WAKDNIRTNSVAP-WYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP 246
           +    +  N++ P   I T     L G                   P+ ++     +   
Sbjct: 182 FGPQGVAINALWPRTVIATDAINMLPG-----------VDAAACRRPEIMADAAHAVLTR 230

Query: 247 AASYITGQTVCIDGGFTVNGF 267
            A+   GQ +  D      G 
Sbjct: 231 EAAGFHGQFLIDDEVLAQAGI 251

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score =  193 bits (493), Expect = 3e-61
 Identities = 73/270 (27%), Positives = 122/270 (45%), Gaps = 14/270 (5%)

Query: 4   PQQTESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHH 63
              +     +     +  TA VTG + G+GLAV   L+  G  V+ C+R    ++  +  
Sbjct: 8   HHHSSGLVPRGSHMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDG 67

Query: 64  LQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFS 123
           L+  G  V GS CDV+S  +    +      F G + I VN+ G +    T + +   ++
Sbjct: 68  LRAAGHDVDGSSCDVTSTDEVHAAVAAAVERF-GPIGILVNSAGRNGGGETADLDDALWA 126

Query: 124 LVMSTNFESAFHLCQ--LAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQL 180
            V+ TN    F + +  L    +R +G   IV ++S  G     +    Y+A+K  +   
Sbjct: 127 DVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGG-KQGVMYAAPYTASKHGVVGF 185

Query: 181 AKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNG---------KFVDEVKSRTPMGRLG 231
            K++  E AK  I  N+V P Y+ TP  E +             +  +   ++ P+GR  
Sbjct: 186 TKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYS 245

Query: 232 EPKEVSSLVAFLCMPAASYITGQTVCIDGG 261
            P+EV+ LV +L   AA+ IT Q + + GG
Sbjct: 246 TPEEVAGLVGYLVTDAAASITAQALNVCGG 275

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score =  192 bits (490), Expect = 5e-61
 Identities = 67/251 (26%), Positives = 117/251 (46%), Gaps = 8/251 (3%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVH-TCSRTETELNECIHHLQMKGLKVTGSV 75
            L+G  ALVTG ++G+G A+ + L+  GA V       + E  E ++ +Q  G       
Sbjct: 4   MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIG 63

Query: 76  CDVSSRPQRQTLINTVSSLFN-----GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNF 130
            ++ S    + L +++ +         K +I +NN G        E   + F  ++S N 
Sbjct: 64  ANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNA 123

Query: 131 ESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAK 190
           ++ F + Q A   LR +    I+ +SSA   +S      YS TKGA+N +   LA +   
Sbjct: 124 KAPFFIIQQALSRLRDNS--RIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLGA 181

Query: 191 DNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY 250
             I  N++ P +++T     LL +        + +   RLGE ++++   AFL  P + +
Sbjct: 182 RGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSRW 241

Query: 251 ITGQTVCIDGG 261
           +TGQ + + GG
Sbjct: 242 VTGQLIDVSGG 252

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score =  192 bits (489), Expect = 7e-61
 Identities = 60/263 (22%), Positives = 97/263 (36%), Gaps = 39/263 (14%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
              +TG   G+G A+ E L+  G TV    R + ++                   D+S+ 
Sbjct: 3   VIAITGSASGIGAALKELLARAGHTVIGIDRGQADI-----------------EADLSTP 45

Query: 82  PQRQTLINTVSSLF------------------NGKLNIFVNNVGTSVLKPTL--EYNAED 121
             R+T +  V                      N  L + VN  G S L   L    +   
Sbjct: 46  GGRETAVAAVLDRCGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQ 105

Query: 122 FSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLA 181
               +     +A        P++ A  A                    Y+ +K A+  LA
Sbjct: 106 QPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQ-GQTHLAYAGSKYAVTCLA 164

Query: 182 KNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEV-KSRTPMGRLGEPKEVSSLV 240
           +    +WA   +R N VAP  + TP  +    + ++ +   +   P+GR  EP+EV+  +
Sbjct: 165 RRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFVAPLGRGSEPREVAEAI 224

Query: 241 AFLCMPAASYITGQTVCIDGGFT 263
           AFL  P AS+I G  + +DGG  
Sbjct: 225 AFLLGPQASFIHGSVLFVDGGMD 247

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score =  192 bits (489), Expect = 1e-60
 Identities = 63/273 (23%), Positives = 107/273 (39%), Gaps = 16/273 (5%)

Query: 2   AQPQQTESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVH-TCSRTETELNEC 60
                T S        L G  AL TG  +G+G  +  EL   GA+V      +     E 
Sbjct: 3   PSADITSSGPSDASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEV 62

Query: 61  IHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAE 120
           +  L+  G +      D+S   +   L +   S F G L+  ++N G  V    LE   E
Sbjct: 63  VAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF-GGLDFVMSNSGMEVWCDELEVTQE 121

Query: 121 DFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQ 179
            F  V + N    F + Q      R  G   I+L SS   +++      +Y+ +K A+  
Sbjct: 122 LFDKVFNLNTRGQFFVAQQGLKHCRRGG--RIILTSSIAAVMTGIPNHALYAGSKAAVEG 179

Query: 180 LAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNG-----------KFVDEVKSRTPMG 228
             +  A +     +  N +AP  ++T   +    +            K  + + +  P+ 
Sbjct: 180 FCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLK 239

Query: 229 RLGEPKEVSSLVAFLCMPAASYITGQTVCIDGG 261
           R+G P ++   V+ LC   + +I GQ + + GG
Sbjct: 240 RIGYPADIGRAVSALCQEESEWINGQVIKLTGG 272

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score =  192 bits (489), Expect = 1e-60
 Identities = 61/257 (23%), Positives = 106/257 (41%), Gaps = 14/257 (5%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVH-TCSRTETELNECIHHLQMKGLKVTGSV 75
                 A+VTGG +G+GL +   L+  G  +  T       +   I  L   G +V    
Sbjct: 26  QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLR 85

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVG--TSVLKPTLEYNAEDFSLVMSTNFESA 133
            D++     Q  ++ V + F G+++  VNN G  + V    L+   E+F  ++  N    
Sbjct: 86  ADLADLSSHQATVDAVVAEF-GRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGT 144

Query: 134 FHLCQLA-HPLLRASGAAS--IVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWA 189
               Q     +L +   AS  I+ ++S   ++  +     Y  +K  +   ++ LA   A
Sbjct: 145 VFFTQAVLKAMLASDARASRSIINITSVSAVM-TSPERLDYCMSKAGLAAFSQGLALRLA 203

Query: 190 KDNIRTNSVAPWYIRTPFTEPLLGNGKFVDE--VKSRTPMGRLGEPKEVSSLVAFLCMPA 247
           +  I    V P  IR+  T  +       D        PM R GEP+++ ++VA L    
Sbjct: 204 ETGIAVFEVRPGIIRSDMTAAV---SGKYDGLIESGLVPMRRWGEPEDIGNIVAGLAGGQ 260

Query: 248 ASYITGQTVCIDGGFTV 264
             + TG  +  DGG ++
Sbjct: 261 FGFATGSVIQADGGLSI 277

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score =  191 bits (487), Expect = 3e-60
 Identities = 76/257 (29%), Positives = 118/257 (45%), Gaps = 14/257 (5%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           +     ALVTG T G+GL +   L   G  V  C+R E  L   +  L+  G++  G  C
Sbjct: 19  TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTC 78

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           DV S P+ + L+  V   + G +++ VNN G      T E   E +  V+ TN    F +
Sbjct: 79  DVRSVPEIEALVAAVVERY-GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRV 137

Query: 137 CQ--LAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAKDNI 193
            +  L    +   G   IV ++S  G     V    YSA+K  +    K L  E A+  I
Sbjct: 138 TKQVLKAGGMLERGTGRIVNIASTGG-KQGVVHAAPYSASKHGVVGFTKALGLELARTGI 196

Query: 194 RTNSVAPWYIRTPFTEPLLGNG---------KFVDEVKSRTPMGRLGEPKEVSSLVAFLC 244
             N+V P ++ TP    +  +          +  D + +R P+GR  +P EV+ +VA+L 
Sbjct: 197 TVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLI 256

Query: 245 MPAASYITGQTVCIDGG 261
            P A+ +T Q + + GG
Sbjct: 257 GPGAAAVTAQALNVCGG 273

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score =  190 bits (486), Expect = 5e-60
 Identities = 61/268 (22%), Positives = 112/268 (41%), Gaps = 23/268 (8%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATV-------------HTCSRTETELNECIHHL 64
           L+G  A +TG  +G G A    ++  GA +                  +  +L+E +  +
Sbjct: 9   LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLV 68

Query: 65  QMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSL 124
           +    ++  +V D     + + +++   +   G+L+I V N G +  +   +   EDF  
Sbjct: 69  EAANRRIVAAVVDTRDFDRLRKVVDDGVAAL-GRLDIIVANAGVAAPQAWDDITPEDFRD 127

Query: 125 VMSTNFESAFHLCQLAHPLLRASGA-ASIVLMSSALGIVSANVGTVYSATKGAMNQLAKN 183
           VM  N    ++      P +   G   SI+L+SSA G+        Y+A+K A+  LA+ 
Sbjct: 128 VMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVTGLARA 187

Query: 184 LACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKF--------VDEVKSRTPMGRLGEPKE 235
            A E  K +IR NSV P  + TP     +             +  V +      + EP++
Sbjct: 188 FAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPDWVAEPED 247

Query: 236 VSSLVAFLCMPAASYITGQTVCIDGGFT 263
           ++  V +L    +  +T   + +D G T
Sbjct: 248 IADTVCWLASDESRKVTAAQIPVDQGST 275

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score =  188 bits (481), Expect = 2e-59
 Identities = 65/271 (23%), Positives = 111/271 (40%), Gaps = 15/271 (5%)

Query: 4   PQQTESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVH-TCSRTETELNECIH 62
           P    +        L G  ALVTG  +G+G AV   L  LGA V    + +  +  + + 
Sbjct: 2   PHVENASETYIPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVS 61

Query: 63  HLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDF 122
            ++  G        D+   P+   L +   + F G L+I V+N G        +   E+F
Sbjct: 62  EIKALGSDAIAIKADIRQVPEIVKLFDQAVAHF-GHLDIAVSNSGVVSFGHLKDVTEEEF 120

Query: 123 SLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLA 181
             V S N    F + + A+  L   G   IVL SS      +    ++YS +KGA++   
Sbjct: 121 DRVFSLNTRGQFFVAREAYRHLTEGG--RIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFV 178

Query: 182 KNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNG----------KFVDEVKSRTPMGRLG 231
           +  + +     I  N+VAP    T     +  +           +        +P+ R G
Sbjct: 179 RIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNG 238

Query: 232 EPKEVSSLVAFLCMPAASYITGQTVCIDGGF 262
            P++V+++V FL      ++ G+ + +DGG 
Sbjct: 239 WPQDVANVVGFLVSKEGEWVNGKVLTLDGGA 269

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score =  189 bits (482), Expect = 2e-59
 Identities = 69/260 (26%), Positives = 108/260 (41%), Gaps = 16/260 (6%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVH-TCSRTETELNECIHHLQMKGLKVTGSV 75
           SL+G  ALVTG  +G+G  +  EL   G  V    + +     E +  ++  G       
Sbjct: 26  SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVK 85

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
            +V        +      +F GKL+I  +N G        +   E+F  V + N    F 
Sbjct: 86  ANVGVVEDIVRMFEEAVKIF-GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFF 144

Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAKDNIR 194
           + + A+  L   G   ++LM S  G   A     VYS +KGA+   A+ +A + A   I 
Sbjct: 145 VAREAYKHLEIGG--RLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKIT 202

Query: 195 TNSVAPWYIRT-----------PFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFL 243
            N VAP  I+T           P  E L             +P+ R+G P +++ +V FL
Sbjct: 203 VNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFL 262

Query: 244 CMPAASYITGQTVCIDGGFT 263
                 ++TG+ + IDGG  
Sbjct: 263 ASNDGGWVTGKVIGIDGGAC 282

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score =  188 bits (480), Expect = 2e-59
 Identities = 61/251 (24%), Positives = 107/251 (42%), Gaps = 10/251 (3%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVH-TCSRTETELNECIHHLQMKGLKVTGSV 75
                 AL+T GTKGLG  V E+L   G +V  T     T +       +    ++    
Sbjct: 4   GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQ 63

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTL--EYNAEDFSLVMSTNFESA 133
            DV+ +     ++    S F GK++  +NN G  V +     +Y  ++++ ++  N  + 
Sbjct: 64  ADVTKKEDLHKIVEEAMSHF-GKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAV 122

Query: 134 FHLCQLAHPLLRASGAASIVLMS--SALGIVSANVG-TVYSATKGAMNQLAKNLACEWAK 190
           FHL +L  P++R      I+      A       +  + ++A K  +  L K +A E A+
Sbjct: 123 FHLLKLVVPVMRKQNFGRIINYGFQGADS-APGWIYRSAFAAAKVGLVSLTKTVAYEEAE 181

Query: 191 DNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY 250
             I  N V P  I     E      +     +  TP+GR G  ++++  ++FLC   +  
Sbjct: 182 YGITANMVCPGDIIGEMKEAT--IQEARQLKEHNTPIGRSGTGEDIARTISFLCEDDSDM 239

Query: 251 ITGQTVCIDGG 261
           ITG  + + G 
Sbjct: 240 ITGTIIEVTGA 250

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score =  187 bits (478), Expect = 3e-59
 Identities = 51/271 (18%), Positives = 86/271 (31%), Gaps = 31/271 (11%)

Query: 1   MAQPQQTESHSRQ--NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELN 58
           M        HS     R S      LV GG+  LG  VV+          +    E    
Sbjct: 1   MGSSHHHHHHSSGLVPRGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA 60

Query: 59  ECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVG-TSVLKPTLEY 117
           +                   S   + +++I  ++S    K++ FV   G  S    + + 
Sbjct: 61  D------------HSFTIKDSGEEEIKSVIEKINSKS-IKVDTFVCAAGGWSGGNASSDE 107

Query: 118 NAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAM 177
             +    ++  N  SAF    +   LL   G    VL  ++  +   +    Y ATK A 
Sbjct: 108 FLKSVKGMIDMNLYSAFASAHIGAKLLNQGG--LFVLTGASAALNRTSGMIAYGATKAAT 165

Query: 178 NQLAKNLACEWA--KDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKE 235
           + + K+LA E         +  + P  + TP     + +  F       TP+  + E   
Sbjct: 166 HHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKYMSDANF----DDWTPLSEVAEK-- 219

Query: 236 VSSLVAFLCMPAASYITGQTVCID--GGFTV 264
              L  +     +    G  V  +     T 
Sbjct: 220 ---LFEWSTNSDSRPTNGSLVKFETKSKVTT 247

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score =  188 bits (479), Expect = 6e-59
 Identities = 53/260 (20%), Positives = 99/260 (38%), Gaps = 20/260 (7%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETE-------LNECIHHLQMKGL 69
           SL+G T  ++GG++G+GLA+ + ++  GA V   +++          +      ++  G 
Sbjct: 6   SLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGG 65

Query: 70  KVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTN 129
           +    V D+         +      F G ++I VNN     L    E   + F L+    
Sbjct: 66  QALPIVGDIRDGDAVAAAVAKTVEQF-GGIDICVNNASAINLGSIEEVPLKRFDLMNGIQ 124

Query: 130 FESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEW 188
               + + Q   P ++      I+ +S  + +    +  T Y   K  M   A  +A E 
Sbjct: 125 VRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCALGIAEEL 184

Query: 189 AKDNIRTNSVAP-WYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA 247
               I +N++ P   + T   + LLG             M R  +P+  +     +    
Sbjct: 185 RDAGIASNTLWPRTTVATAAVQNLLG---------GDEAMARSRKPEVYADAAYVVLNKP 235

Query: 248 ASYITGQTVCIDGGFTVNGF 267
           +SY TG T+  +     +G 
Sbjct: 236 SSY-TGNTLLCEDVLLESGV 254

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  186 bits (475), Expect = 7e-59
 Identities = 66/244 (27%), Positives = 102/244 (41%), Gaps = 16/244 (6%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSV-- 75
           L+G   LVTG  +G+G A     +  GA+V    RTE  L E    ++  G      +  
Sbjct: 12  LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIAL 71

Query: 76  -CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVG-TSVLKPTLEYNAEDFSLVMSTNFESA 133
             + ++  Q + L   V   F G+L+  ++N        P  +   EDF  VM  N  + 
Sbjct: 72  NLENATAQQYRELAARVEHEF-GRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNAT 130

Query: 134 FHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEW-AKDN 192
           F L +   PLL+ S  ASI   SS++G         Y  +K A   L + LA E      
Sbjct: 131 FMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKFATEGLMQTLADELEGVTA 190

Query: 193 IRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT 252
           +R NS+ P   RT           + DE     P+     P+++  +  +L  P ++ I 
Sbjct: 191 VRANSINPGATRTGMRAQA-----YPDE----NPLNN-PAPEDIMPVYLYLMGPDSTGIN 240

Query: 253 GQTV 256
           GQ +
Sbjct: 241 GQAL 244

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score =  186 bits (474), Expect = 1e-58
 Identities = 51/263 (19%), Positives = 100/263 (38%), Gaps = 18/263 (6%)

Query: 6   QTESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVH-TCSRTETELNECIHHL 64
             E+   Q   +L     L+TG ++ +GL     L   G  V  +       + E     
Sbjct: 13  GRENLYFQGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTEL---- 68

Query: 65  QMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSL 124
             +         D S        I+ + +     L   V+N    + +   E  A++F+ 
Sbjct: 69  --RQAGAVALYGDFSCETGIMAFIDLLKTQT-SSLRAVVHNASEWLAETPGE-EADNFTR 124

Query: 125 VMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKN 183
           + S +  + + +     PLL AS  A IV +S  +     +     Y ATK  +  L  +
Sbjct: 125 MFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRK-GSSKHIAYCATKAGLESLTLS 183

Query: 184 LACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFL 243
            A  +A   ++ N +AP  +     +       +     +++ +G     + +   + +L
Sbjct: 184 FAARFA-PLVKVNGIAPALLMFQPKDD----AAYRANALAKSALGIEPGAEVIYQSLRYL 238

Query: 244 CMPAASYITGQTVCIDGGFTVNG 266
               ++Y+TG T+ ++GG  V G
Sbjct: 239 L--DSTYVTGTTLTVNGGRHVKG 259

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  186 bits (475), Expect = 2e-58
 Identities = 60/256 (23%), Positives = 101/256 (39%), Gaps = 11/256 (4%)

Query: 7   TESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQM 66
            +S   Q + S +G  ALVTGG  G+G  + + LS  G +V    R    L+     +  
Sbjct: 20  FQSMMAQGKGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGG 79

Query: 67  K-GLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVG-TSVLKPTLEYNAEDFSL 124
           + G  V   VCDV    Q   L   V + F  +L++ VNN G      P  E   E ++ 
Sbjct: 80  RTGNIVRAVVCDVGDPDQVAALFAAVRAEF-ARLDLLVNNAGSNVPPVPLEEVTFEQWNG 138

Query: 125 VMSTNFESAFHLCQLAHPLLRASGAAS--IVLMSSALGIVSANVGTV-YSATKGAMNQLA 181
           +++ N   AF   Q A  +++A       I+   S          +  Y+ATK A+  L 
Sbjct: 139 IVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQT-PRPNSAPYTATKHAITGLT 197

Query: 182 KNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVA 241
           K+ A +    +I    +      T  T  +      V +             + ++  V 
Sbjct: 198 KSTALDGRMHDIACGQIDIGNAATDMTARMSTG---VLQANGEVAAEPTIPIEHIAEAVV 254

Query: 242 FLC-MPAASYITGQTV 256
           ++  +P ++ +   TV
Sbjct: 255 YMASLPLSANVLTMTV 270

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score =  186 bits (475), Expect = 2e-58
 Identities = 72/253 (28%), Positives = 127/253 (50%), Gaps = 19/253 (7%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
             +   ALVTG  +G+G  + + L+   + V   SRT+   +  +  ++  G + +G   
Sbjct: 41  CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAG 100

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTL-----EYNAEDFSLVMSTNFE 131
           DVS + +   +IN + +     ++I VNN G  + +  L         +++  V+ TN  
Sbjct: 101 DVSKKEEISEVINKILTEH-KNVDILVNNAG--ITRDNLFLRMKN---DEWEDVLRTNLN 154

Query: 132 SAFHLCQLA-HPLLRA-SGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEW 188
           S F++ Q     ++    G   I+ +SS +G ++ NVG   YS++K  +    K+LA E 
Sbjct: 155 SLFYITQPISKRMINNRYG--RIINISSIVG-LTGNVGQANYSSSKAGVIGFTKSLAKEL 211

Query: 189 AKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAA 248
           A  NI  N++AP +I +  T+ +  + +    + S  P GR+G P+EV++L  FL    +
Sbjct: 212 ASRNITVNAIAPGFISSDMTDKI--SEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKS 269

Query: 249 SYITGQTVCIDGG 261
            YI G+   IDGG
Sbjct: 270 GYINGRVFVIDGG 282

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score =  185 bits (471), Expect = 3e-58
 Identities = 77/253 (30%), Positives = 128/253 (50%), Gaps = 19/253 (7%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           SL    ALVTG ++G+G  V   L+  GATV   + ++    +  + ++ KG K  G V 
Sbjct: 2   SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVL 61

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTL-----EYNAEDFSLVMSTNFE 131
           ++S     Q     + +     ++I VNN G  + +  L     E   +++  V++TN  
Sbjct: 62  NISDIESIQNFFAEIKAEN-LAIDILVNNAG--ITRDNLMMRMSE---DEWQSVINTNLS 115

Query: 132 SAFHLCQLA-HPLLRA-SGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEW 188
           S F + +     +++   G   I+ + S +G  + N G   Y A K  +   +K+LA E 
Sbjct: 116 SIFRMSKECVRGMMKKRWG--RIISIGSVVG-SAGNPGQTNYCAAKAGVIGFSKSLAYEV 172

Query: 189 AKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAA 248
           A  NI  N VAP +I T  T+ L    +    + ++ P G++GEPK++++ VAFL    A
Sbjct: 173 ASRNITVNVVAPGFIATDMTDKL--TDEQKSFIATKIPSGQIGEPKDIAAAVAFLASEEA 230

Query: 249 SYITGQTVCIDGG 261
            YITGQT+ ++GG
Sbjct: 231 KYITGQTLHVNGG 243

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score =  184 bits (469), Expect = 7e-58
 Identities = 81/253 (32%), Positives = 134/253 (52%), Gaps = 18/253 (7%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVH-TCSRTETELNECIHHLQMKGLKVTGSV 75
            L+G TA+VTG ++GLG A+  +L  +GA +    S   T L+      +  G+ V  + 
Sbjct: 2   QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAK 61

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVG----TSVLKPTLEYNAEDFSLVMSTNFE 131
            DV +    + ++ T    F G+++I VNN G    T +LK +     +D+  V++TN +
Sbjct: 62  GDVKNPEDVENMVKTAMDAF-GRIDILVNNAGITRDTLMLKMS----EKDWDDVLNTNLK 116

Query: 132 SAFHLCQLA-HPLLRA-SGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEW 188
           SA+   +     +L+  SG   I+ ++S  G +  N G   Y+A+K  +    K++A E+
Sbjct: 117 SAYLCTKAVSKIMLKQKSG--KIINITSIAG-IIGNAGQANYAASKAGLIGFTKSIAKEF 173

Query: 189 AKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAA 248
           A   I  N+VAP  I+T  T+ L    K  +   +  P+ R G P+EV+++V FL    +
Sbjct: 174 AAKGIYCNAVAPGIIKTDMTDVL--PDKVKEMYLNNIPLKRFGTPEEVANVVGFLASDDS 231

Query: 249 SYITGQTVCIDGG 261
           +YITGQ + IDGG
Sbjct: 232 NYITGQVINIDGG 244

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score =  184 bits (469), Expect = 1e-57
 Identities = 81/269 (30%), Positives = 133/269 (49%), Gaps = 19/269 (7%)

Query: 1   MAQPQQTESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNEC 60
           M   +           +L    A+VTG ++G+G A+  EL+  GA V   + TE      
Sbjct: 9   MGTLEAQTQGPGSMDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGI 68

Query: 61  IHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTL----- 115
               +  GL+  G+V +V+       L+ +    F G LN+ VNN G  + +  L     
Sbjct: 69  GAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEF-GALNVLVNNAG--ITQDQLAMRMK 125

Query: 116 EYNAEDFSLVMSTNFESAFHLCQLA-HPLLRA-SGAASIVLMSSALGIVSANVGTV-YSA 172
           +   +++  V+ TN ++ F L +    P+++A  G   IV ++S +G  + N G V Y+A
Sbjct: 126 D---DEWDAVIDTNLKAVFRLSRAVLRPMMKARGG--RIVNITSVVG-SAGNPGQVNYAA 179

Query: 173 TKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGE 232
            K  +  + + LA E     I  N VAP +I T  T+ L    +    +K++ P+GRLG 
Sbjct: 180 AKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGL--PQEQQTALKTQIPLGRLGS 237

Query: 233 PKEVSSLVAFLCMPAASYITGQTVCIDGG 261
           P++++  VAFL  P A YITG T+ ++GG
Sbjct: 238 PEDIAHAVAFLASPQAGYITGTTLHVNGG 266

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score =  183 bits (466), Expect = 2e-57
 Identities = 63/248 (25%), Positives = 103/248 (41%), Gaps = 8/248 (3%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L G TALVTG  +G+G A+   L+  GATV                +   G K      D
Sbjct: 4   LAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI---GKKARAIAAD 60

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           +S     + L   + +L  G ++I VNN          + + + +  ++  N    F + 
Sbjct: 61  ISDPGSVKALFAEIQALT-GGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVT 119

Query: 138 QLA-HPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAKDNIRT 195
           +     +  A  A  ++ ++S     +       Y A KG +    + LA E  K NI  
Sbjct: 120 RAGTDQMRAAGKAGRVISIASNTF-FAGTPNMAAYVAAKGGVIGFTRALATELGKYNITA 178

Query: 196 NSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT 255
           N+V P  I +   +    N  F   V+    M   G+P+ ++ +V+FL    A +ITGQT
Sbjct: 179 NAVTPGLIESDGVKASPHNEAF-GFVEMLQAMKGKGQPEHIADVVSFLASDDARWITGQT 237

Query: 256 VCIDGGFT 263
           + +D G  
Sbjct: 238 LNVDAGMV 245

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score =  182 bits (465), Expect = 2e-57
 Identities = 71/250 (28%), Positives = 114/250 (45%), Gaps = 19/250 (7%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
            L+    L+TG   G+G A +E  +  GA +  C   E  L E       + +     V 
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAA-----EAVGAHPVVM 56

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVG----TSVLKPTLEYNAEDFSLVMSTNFES 132
           DV+     +       +   G+L+  V+  G        K  LE    D+ LV+  N   
Sbjct: 57  DVADPASVERGFAEALAHL-GRLDGVVHYAGITRDNFHWKMPLE----DWELVLRVNLTG 111

Query: 133 AFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAKD 191
           +F + + A   +R     SIVL +S + +   N+G   Y+A+   +  L + LA E  + 
Sbjct: 112 SFLVAKAASEAMREKNPGSIVLTASRVYL--GNLGQANYAASMAGVVGLTRTLALELGRW 169

Query: 192 NIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI 251
            IR N++AP +I T  T  +    K  ++  + TP+GR G+P EV+    FL    +S+I
Sbjct: 170 GIRVNTLAPGFIETRMTAKV--PEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFI 227

Query: 252 TGQTVCIDGG 261
           TGQ + +DGG
Sbjct: 228 TGQVLFVDGG 237

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score =  183 bits (467), Expect = 2e-57
 Identities = 66/250 (26%), Positives = 105/250 (42%), Gaps = 8/250 (3%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVH-TCSRTETELNECIHHLQMKGLKVTGSVC 76
                 LVTGG++G+G AV    +  G  V    +      +  +  +   G +      
Sbjct: 24  SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPG 83

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVG-TSVLKPTLEYNAEDFSLVMSTNFESAFH 135
           DV +      + + V   F G+L+  VNN G     +   E + E    ++  N   +  
Sbjct: 84  DVGNAADIAAMFSAVDRQF-GRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSIL 142

Query: 136 LCQLAHPLLRASGAA---SIVLMSSALGIV-SANVGTVYSATKGAMNQLAKNLACEWAKD 191
               A   +    +    +IV +SS   I+ SA     Y+A+K A++     LA E A +
Sbjct: 143 CAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAASKAAIDTFTIGLAREVAAE 202

Query: 192 NIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI 251
            IR N+V P  I T       G      E+    PM R G P+EV+  + +L  P+ASY+
Sbjct: 203 GIRVNAVRPGIIETDLH-ASGGLPDRAREMAPSVPMQRAGMPEEVADAILYLLSPSASYV 261

Query: 252 TGQTVCIDGG 261
           TG  + + GG
Sbjct: 262 TGSILNVSGG 271

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score =  183 bits (467), Expect = 3e-57
 Identities = 65/268 (24%), Positives = 105/268 (39%), Gaps = 22/268 (8%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATV-------------HTCSRTETELNECIHH 63
           SLQG  A +TG  +G G +    L+  GA +                  +  +L+E    
Sbjct: 12  SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARL 71

Query: 64  LQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFS 123
           ++ +G K    V DV      + L+      F G+L++ V N G        E   E + 
Sbjct: 72  VEDQGRKALTRVLDVRDDAALRELVADGMEQF-GRLDVVVANAGVLSWGRVWELTDEQWD 130

Query: 124 LVMSTNFESAFHLCQLAHPLLRASGA-ASIVLMSSALGIVSANVGTVYSATKGAMNQLAK 182
            V+  N    +   +   P +  +G   SIV++SS+ G+ +      YSA+K  +  L  
Sbjct: 131 TVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTALTN 190

Query: 183 NLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVD-------EVKSRTPMGRLGEPKE 235
            LA E  +  IR NS+ P+ + TP  EP      F                        E
Sbjct: 191 TLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPNGFMTADE 250

Query: 236 VSSLVAFLCMPAASYITGQTVCIDGGFT 263
           V+ +VA+L    +  +TG  + +D G  
Sbjct: 251 VADVVAWLAGDGSGTLTGTQIPVDKGAL 278

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  182 bits (464), Expect = 4e-57
 Identities = 52/253 (20%), Positives = 102/253 (40%), Gaps = 18/253 (7%)

Query: 20  GMTALVTGGTKGLGLAVVEELSMLGATV--HTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           G   LVTG ++G+G ++V+ L  L      +  +R+E  L +        G +    V D
Sbjct: 2   GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY---GDRFFYVVGD 58

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVG-TSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           ++     + L+N       GK++  V N G    ++   E +   +  +   NF S   L
Sbjct: 59  ITEDSVLKQLVNAAVKGH-GKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSL 117

Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTN 196
             +A P L+ +   ++V +SS    +  +    Y ++K A+N  A  LA E  +  ++  
Sbjct: 118 VGIALPELKKTNG-NVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANE--ERQVKAI 174

Query: 197 SVAPWYIRTPFTEPLLGNGK-------FVDEVKSRTPMGRLGEPKEVSSLVAFLCM-PAA 248
           +VAP  + T     +  N          +   +      +L +    +++ A L +    
Sbjct: 175 AVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKLALHGIP 234

Query: 249 SYITGQTVCIDGG 261
             + GQ +  +  
Sbjct: 235 DGVNGQYLSYNDP 247

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score =  182 bits (465), Expect = 4e-57
 Identities = 83/260 (31%), Positives = 123/260 (47%), Gaps = 24/260 (9%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVT---- 72
            L+   ALVTG   G+G AV   L+  GATV  C        E +  L   G K      
Sbjct: 4   RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRG 63

Query: 73  ---GSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVG----TSVLKPTLEYNAEDFSLV 125
                  DVS     + L+  V + F+   ++ V+  G      +L  +     +D+  V
Sbjct: 64  NHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMS----EDDWDKV 119

Query: 126 MSTNFESAFHLCQLAHPLL---RASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLA 181
           ++ N +  F + Q A   L      G  SI+ +SS +G    NVG T Y+A+K  +  L 
Sbjct: 120 IAVNLKGTFLVTQAAAQALVSNGCRG--SIINISSIVG-KVGNVGQTNYAASKAGVIGLT 176

Query: 182 KNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVA 241
           +  A E  +  IR NSV P +I TP T+ +    K VD++    PMG LG+P++V+ +VA
Sbjct: 177 QTAARELGRHGIRCNSVLPGFIATPMTQKV--PQKVVDKITEMIPMGHLGDPEDVADVVA 234

Query: 242 FLCMPAASYITGQTVCIDGG 261
           FL    + YITG +V + GG
Sbjct: 235 FLASEDSGYITGTSVEVTGG 254

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score =  182 bits (465), Expect = 4e-57
 Identities = 58/260 (22%), Positives = 100/260 (38%), Gaps = 24/260 (9%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHL--QMKGLKVTGSV 75
           + G  ALVTG  +G+G A  E L + GA V           +C   L  Q +  K     
Sbjct: 5   VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQ 64

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
           CDV+ + Q +     V   F G+L+I VNN G +        N +++   +  N  S   
Sbjct: 65  CDVADQQQLRDTFRKVVDHF-GRLDILVNNAGVN--------NEKNWEKTLQINLVSVIS 115

Query: 136 LCQLAHPLLRASGA---ASIVLMSSALGIVSANVGTVYSATKGAMNQLAKN--LACEWAK 190
              L    +          I+ MSS  G++      VY A+K  +    ++  LA     
Sbjct: 116 GTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMN 175

Query: 191 DNIRTNSVAPWYIRTPFTEPLL------GNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLC 244
             +R N++ P ++ T   E +          ++ D +K       + +P  +++ +  L 
Sbjct: 176 SGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLI 235

Query: 245 MPAASYITGQTVCIDGGFTV 264
              A  + G  + I     +
Sbjct: 236 EDDA--LNGAIMKITTSKGI 253

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score =  181 bits (463), Expect = 5e-57
 Identities = 77/253 (30%), Positives = 125/253 (49%), Gaps = 20/253 (7%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVH-TCSRTETELNECIHHLQMKGLKVTGSVC 76
           L+G  ALVTG ++G+G A+  +L+  GA V    +  E + NE +  ++  G        
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRA 61

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTL-----EYNAEDFSLVMSTNFE 131
           DV++      ++     +F G+++I VNN G  V K  L     E   E++  V++TN +
Sbjct: 62  DVANAEDVTNMVKQTVDVF-GQVDILVNNAG--VTKDNLLMRMKE---EEWDTVINTNLK 115

Query: 132 SAFHLCQLA-HPLLRA-SGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEW 188
             F   +     ++R   G   IV ++S +G V+ N G   Y A K  +  L K  A E 
Sbjct: 116 GVFLCTKAVSRFMMRQRHG--RIVNIASVVG-VTGNPGQANYVAAKAGVIGLTKTSAKEL 172

Query: 189 AKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAA 248
           A  NI  N++AP +I T  T+ L  +     E+    P  + GE +++++ V F     +
Sbjct: 173 ASRNITVNAIAPGFIATDMTDVL--DENIKAEMLKLIPAAQFGEAQDIANAVTFFASDQS 230

Query: 249 SYITGQTVCIDGG 261
            YITGQT+ +DGG
Sbjct: 231 KYITGQTLNVDGG 243

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score =  181 bits (461), Expect = 1e-56
 Identities = 74/253 (29%), Positives = 132/253 (52%), Gaps = 20/253 (7%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVH-TCSRTETELNECIHHLQMKGLKVTGSVC 76
               +ALVTG ++G+G ++  +L+  G  V    + ++ +    +  ++ KG+       
Sbjct: 2   KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQA 61

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTL-----EYNAEDFSLVMSTNFE 131
           +V+   + + +I  V S F G L++ VNN G  + +  L     E   +++  V+ TN +
Sbjct: 62  NVADADEVKAMIKEVVSQF-GSLDVLVNNAG--ITRDNLLMRMKE---QEWDDVIDTNLK 115

Query: 132 SAFHLCQLA-HPLLRA-SGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEW 188
             F+  Q A   +LR  SG  +I+ +SS +G    N G   Y ATK  +  L K+ A E 
Sbjct: 116 GVFNCIQKATPQMLRQRSG--AIINLSSVVG-AVGNPGQANYVATKAGVIGLTKSAAREL 172

Query: 189 AKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAA 248
           A   I  N+VAP +I +  T+ L  + +  +++ ++ P+ R G+  ++++ VAFL    A
Sbjct: 173 ASRGITVNAVAPGFIVSDMTDAL--SDELKEQMLTQIPLARFGQDTDIANTVAFLASDKA 230

Query: 249 SYITGQTVCIDGG 261
            YITGQT+ ++GG
Sbjct: 231 KYITGQTIHVNGG 243

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score =  181 bits (462), Expect = 1e-56
 Identities = 52/254 (20%), Positives = 92/254 (36%), Gaps = 11/254 (4%)

Query: 7   TESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQM 66
           TE+   Q+        A+VTG   G+G AV   L+  G  V    R    L E    +  
Sbjct: 15  TENLYFQSMSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI-- 72

Query: 67  KGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVG-TSVLKPTLEYNAEDFSLV 125
            G        DV+     + L       F G++++  NN G  +   P  +     +  V
Sbjct: 73  -GDDALCVPTDVTDPDSVRALFTATVEKF-GRVDVLFNNAGTGAPAIPMEDLTFAQWKQV 130

Query: 126 MSTNFESAFHLCQLAHPLLRASGAAS--IVLMSSALGIVSANVGTVYSATKGAMNQLAKN 183
           + TN    F   Q A  +++A       I+   S            Y+ATK A+  L K+
Sbjct: 131 VDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKS 190

Query: 184 LACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFL 243
            + +    +I    +      TP  + +      V +      +  + +   V+S V ++
Sbjct: 191 TSLDGRVHDIACGQIDIGNADTPMAQKMKAG---VPQADLSIKVEPVMDVAHVASAVVYM 247

Query: 244 C-MPAASYITGQTV 256
             +P  + +   T+
Sbjct: 248 ASLPLDANVQFMTI 261

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score =  180 bits (460), Expect = 2e-56
 Identities = 64/259 (24%), Positives = 111/259 (42%), Gaps = 14/259 (5%)

Query: 9   SHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATV-HTCSRTETELNECIHHLQMK 67
           +H   +   +    A VTGG  G+G ++ + L   G  V   C        + +   +  
Sbjct: 2   AHHHHHHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKAL 61

Query: 68  GLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVG----TSVLKPTLEYNAEDFS 123
           G     S  +V      +   + V +   G++++ VNN G        K T     ED+ 
Sbjct: 62  GFDFYASEGNVGDWDSTKQAFDKVKAEV-GEIDVLVNNAGITRDVVFRKMT----REDWQ 116

Query: 124 LVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAK 182
            V+ TN  S F++ +     +   G   I+ +SS  G      G T YS  K  ++    
Sbjct: 117 AVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNG-QKGQFGQTNYSTAKAGIHGFTM 175

Query: 183 NLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAF 242
           +LA E A   +  N+V+P YI T   + +      ++++ +  P+ RLG P E+ S+VA+
Sbjct: 176 SLAQEVATKGVTVNTVSPGYIGTDMVKAI--RPDVLEKIVATIPVRRLGSPDEIGSIVAW 233

Query: 243 LCMPAASYITGQTVCIDGG 261
           L    + + TG    ++GG
Sbjct: 234 LASEESGFSTGADFSLNGG 252

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score =  179 bits (458), Expect = 3e-56
 Identities = 80/254 (31%), Positives = 126/254 (49%), Gaps = 20/254 (7%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHL-QMKGLKVTGSV 75
            LQG  +LVTG T+G+G A+ E+L+  G+TV     +          +    G+K  G  
Sbjct: 4   KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVE 63

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTL-----EYNAEDFSLVMSTNF 130
            ++ S          + +L    ++I VNN G  + +  L          D+  V+  N 
Sbjct: 64  MNLLSEESINKAFEEIYNLV-DGIDILVNNAG--ITRDKLFLRMSL---LDWEEVLKVNL 117

Query: 131 ESAFHLCQLA-HPLLRA-SGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACE 187
              F + Q +   +++   G   IV +SS +G  + NVG V YS TK  +    K+LA E
Sbjct: 118 TGTFLVTQNSLRKMIKQRWG--RIVNISSVVG-FTGNVGQVNYSTTKAGLIGFTKSLAKE 174

Query: 188 WAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA 247
            A  N+  N+VAP +I T  T  L  + +   + K + P+GR G P+EV+++V FLC   
Sbjct: 175 LAPRNVLVNAVAPGFIETDMTAVL--SEEIKQKYKEQIPLGRFGSPEEVANVVLFLCSEL 232

Query: 248 ASYITGQTVCIDGG 261
           ASYITG+ + ++GG
Sbjct: 233 ASYITGEVIHVNGG 246

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score =  178 bits (455), Expect = 1e-55
 Identities = 78/248 (31%), Positives = 131/248 (52%), Gaps = 12/248 (4%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           +L+G  ALVTG ++G+G A+ E L+  GA V   + +E+       +L   G    G   
Sbjct: 6   NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYL---GDNGKGMAL 62

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           +V++    + ++  ++  F G ++I VNN G +     +    E++S +M TN  S F L
Sbjct: 63  NVTNPESIEAVLKAITDEF-GGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRL 121

Query: 137 CQLA-HPLLRA-SGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEWAKDNI 193
            +     +++   G   I+ + S +G    N G   Y+A K  +    K++A E A   +
Sbjct: 122 SKAVLRGMMKKRQG--RIINVGSVVG-TMGNAGQANYAAAKAGVIGFTKSMAREVASRGV 178

Query: 194 RTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG 253
             N+VAP +I T  T+ L  N +      ++ P GRLG+P+E++S VAFL  P A+YITG
Sbjct: 179 TVNTVAPGFIETDMTKAL--NDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITG 236

Query: 254 QTVCIDGG 261
           +T+ ++GG
Sbjct: 237 ETLHVNGG 244

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score =  178 bits (455), Expect = 1e-55
 Identities = 76/253 (30%), Positives = 118/253 (46%), Gaps = 22/253 (8%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
            L G  ALVTG T G+G A+       GA V      E +L E    L   G  V     
Sbjct: 24  KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL---GKDVFVFSA 80

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTL-----EYNAEDFSLVMSTNFE 131
           ++S R   + L           ++I VNN G  + +  L     +   +D+  V++ N  
Sbjct: 81  NLSDRKSIKQLAEVAEREM-EGIDILVNNAG--ITRDGLFVRMQD---QDWDDVLAVNLT 134

Query: 132 SAFHLCQLA-HPLLRA-SGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEW 188
           +A  L +   H ++R   G   I+ ++S +G V  N G   Y A K  +   +K LA E 
Sbjct: 135 AASTLTRELIHSMMRRRYG--RIINITSIVG-VVGNPGQTNYCAAKAGLIGFSKALAQEI 191

Query: 189 AKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAA 248
           A  NI  N +AP +I++  T+ L  N K  + + +  PM R+G  +E++    +L    A
Sbjct: 192 ASRNITVNCIAPGFIKSAMTDKL--NEKQKEAIMAMIPMKRMGIGEEIAFATVYLASDEA 249

Query: 249 SYITGQTVCIDGG 261
           +Y+TGQT+ I+GG
Sbjct: 250 AYLTGQTLHINGG 262

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score =  177 bits (451), Expect = 3e-55
 Identities = 70/248 (28%), Positives = 115/248 (46%), Gaps = 19/248 (7%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
            ++    LV   ++G+G AV + LS  GA V  C+R E  L    H            VC
Sbjct: 16  GIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYV---------VC 66

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           D+         ++ +      +++I V N G        E   EDF   + + F +   +
Sbjct: 67  DLR------KDLDLLFEKV-KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKI 119

Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAKDNIRT 195
            +   P ++  G   IV ++S    +S        ++ + A+    K L+ E A   I  
Sbjct: 120 VRNYLPAMKEKGWGRIVAITSFSV-ISPIENLYTSNSARMALTGFLKTLSFEVAPYGITV 178

Query: 196 NSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT 255
           N VAP +  T   + LL   +   +V+S+ PM R+ +P+E++S+VAFLC   ASY+TGQT
Sbjct: 179 NCVAPGWTETERVKELLSE-EKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQT 237

Query: 256 VCIDGGFT 263
           + +DGG +
Sbjct: 238 IVVDGGLS 245

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score =  178 bits (453), Expect = 4e-55
 Identities = 62/278 (22%), Positives = 109/278 (39%), Gaps = 32/278 (11%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATV----------------HTCSRTETELNECI 61
           ++G  A VTG  +G G +    L+  GA +                   + T  +L E  
Sbjct: 9   VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETA 68

Query: 62  HHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVG-TSVLKPTLEYNAE 120
             ++    ++  +  DV      +  +++      G+L+I V N G  +      + + E
Sbjct: 69  DLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQL-GRLDIIVANAGIGNGGDTLDKTSEE 127

Query: 121 DFSLVMSTNFESAFHLCQLAHPLLRASGA-ASIVLMSSALGIVSANVGTVYSATKGAMNQ 179
           D++ ++  N    +   +   P + A G   SI+L SS  G+ +      Y A K  +  
Sbjct: 128 DWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGVVG 187

Query: 180 LAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMG----------- 228
           L +    E  +  IR NSV P +++TP          F  ++++  P             
Sbjct: 188 LMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHTL 247

Query: 229 --RLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTV 264
                EP ++S+ V F     A YITG T+ ID G  +
Sbjct: 248 PIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL 285

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score =  177 bits (452), Expect = 5e-55
 Identities = 69/273 (25%), Positives = 109/273 (39%), Gaps = 28/273 (10%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATV------------HTCSRTETELNECIHHLQ 65
            +G TAL+TGG +G+G +    L+  GA +                 T  +L E +  ++
Sbjct: 8   FEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVE 67

Query: 66  MKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLV 125
             G +   +  DV  R   ++ +        G ++I + N G S +    E  +  +  V
Sbjct: 68  KTGRRCISAKVDVKDRAALESFVAEAEDTL-GGIDIAITNAGISTIALLPEVESAQWDEV 126

Query: 126 MSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNL 184
           + TN    F+      P +       IV +SS LG   AN     Y ++K  +  L K  
Sbjct: 127 IGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHS-ANFAQASYVSSKWGVIGLTKCA 185

Query: 185 ACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRT-------------PMGRLG 231
           A +     I  N+VAP  I TP T      G    +++  T                   
Sbjct: 186 AHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPFL 245

Query: 232 EPKEVSSLVAFLCMPAASYITGQTVCIDGGFTV 264
           +P+EV+  V FL   A+S+ITG  + ID G T 
Sbjct: 246 KPEEVTRAVLFLVDEASSHITGTVLPIDAGATA 278

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score =  178 bits (454), Expect = 5e-55
 Identities = 62/275 (22%), Positives = 110/275 (40%), Gaps = 30/275 (10%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATV------------HTCSRTETELNECIHHLQ 65
           ++G  A +TG  +G G +    L+  GA +                 T  +L E +  ++
Sbjct: 26  VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVE 85

Query: 66  MKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVG-TSVLKPTLEYNAEDFSL 124
             G ++  S  DV      Q  ++   +   G+L+I + N    S        + + +  
Sbjct: 86  ALGRRIIASQVDVRDFDAMQAAVDDGVTQL-GRLDIVLANAALASEGTRLNRMDPKTWRD 144

Query: 125 VMSTNFESAFHLCQLAHP-LLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKN 183
           ++  N   A+   ++A P ++      SIV  SS  G+  A     Y A+K  ++ L + 
Sbjct: 145 MIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGLMRT 204

Query: 184 LACEWAKDNIRTNSVAPWYIRTPFTE--------------PLLGNGKFVDEVKSRTPMGR 229
           +A E    NIR N V P  + TP                 P + + +         P+  
Sbjct: 205 MALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLPIPY 264

Query: 230 LGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTV 264
             EP ++S+ + FL    A YITG ++ +DGG  +
Sbjct: 265 -VEPADISNAILFLVSDDARYITGVSLPVDGGALL 298

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score =  177 bits (450), Expect = 6e-55
 Identities = 53/252 (21%), Positives = 97/252 (38%), Gaps = 14/252 (5%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
            + G   +VTG ++G+G  +  +L   GATV+   R    L       Q  G +    VC
Sbjct: 2   PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVC 61

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVL-------KPTLEYNAEDFSLVMSTN 129
           D S   + ++L   V     G+L++ VNN    V        K   E  A  +  + +  
Sbjct: 62  DSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVG 121

Query: 130 FESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEW 188
               +        L+  +G   IV++SS   +    +  V Y   K A ++LA + A E 
Sbjct: 122 LRGHYFCSVYGARLMVPAGQGLIVVISSPGSL--QYMFNVPYGVGKAACDKLAADCAHEL 179

Query: 189 AKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDE--VKSRTPMGRLGE-PKEVSSLVAFLCM 245
            +  +   S+ P  ++T   +  +   + + +  +K         E  +     V  L  
Sbjct: 180 RRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVVALAT 239

Query: 246 -PAASYITGQTV 256
            P    ++G+ +
Sbjct: 240 DPNILSLSGKVL 251

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score =  176 bits (448), Expect = 8e-55
 Identities = 70/245 (28%), Positives = 112/245 (45%), Gaps = 11/245 (4%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATVH-TCSRTETELNECIHHLQMKGLKVTGSVCDVSS 80
             +VTG ++G+G A+   L   G  V    +R+     E    ++  G +      DVS 
Sbjct: 3   VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSK 62

Query: 81  RPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLA 140
               + ++ T    + G +++ VNN G +     +      +  V+  N    F   Q A
Sbjct: 63  EADVEAMMKTAIDAW-GTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAA 121

Query: 141 -HPLLRA-SGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEWAKDNIRTNS 197
              +++   G   I+ ++S +G +  N+G   Y+A K  +   +K  A E A  NI  N 
Sbjct: 122 TKIMMKKRKG--RIINIASVVG-LIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNV 178

Query: 198 VAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCM-PAASYITGQTV 256
           V P +I +  T  L        ++    P+GR G+P+ V+ LV FL + PAASYITGQ  
Sbjct: 179 VCPGFIASDMTAKL--GEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAF 236

Query: 257 CIDGG 261
            IDGG
Sbjct: 237 TIDGG 241

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score =  177 bits (450), Expect = 1e-54
 Identities = 62/283 (21%), Positives = 102/283 (36%), Gaps = 41/283 (14%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATV------------HTCSRTETELNECIHHLQ 65
           +Q    LVTGG +G G +   +L+  GA +                 T  +L E    ++
Sbjct: 8   VQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVE 67

Query: 66  MKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLV 125
             G K   +  DV  R      +    + F GKL++ V N G  +         + F+  
Sbjct: 68  KTGRKAYTAEVDVRDRAAVSRELANAVAEF-GKLDVVVANAG--ICPLGAHLPVQAFADA 124

Query: 126 MSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANV-----------GTVYSATK 174
              +F    +    A P L +    SI+   S  G+++A             G  YS  K
Sbjct: 125 FDVDFVGVINTVHAALPYLTSGA--SIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAK 182

Query: 175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTE---------PLLGNGKFVDEVKSRT 225
             ++     LA + A  +IR N + P  + T             P L      D + +  
Sbjct: 183 QLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFP 242

Query: 226 PMGRLG----EPKEVSSLVAFLCMPAASYITGQTVCIDGGFTV 264
            M  +     E  ++S+ V FL    + Y+TG    +D G  +
Sbjct: 243 AMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAML 285

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score =  176 bits (449), Expect = 1e-54
 Identities = 81/250 (32%), Positives = 121/250 (48%), Gaps = 14/250 (5%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVH-TCSRTETELNECIHHLQMKGLKVTGSV 75
            L    ALVTG ++G+G A+  EL+  GA V    + +    +E +  +   G +     
Sbjct: 25  PLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVK 84

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
            DVS   + + L   V   + G+L++ VNN G +     L    +D+  V+  N    F 
Sbjct: 85  ADVSQESEVEALFAAVIERW-GRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFL 143

Query: 136 LCQLA-HPLLRA-SGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEWAKDN 192
             + A   +L+  SG   I+ ++S +G    N G   YSA K  +  L K +A E A   
Sbjct: 144 CSRAAAKIMLKQRSG--RIINIASVVG-EMGNPGQANYSAAKAGVIGLTKTVAKELASRG 200

Query: 193 IRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLC-MPAASYI 251
           I  N+VAP +I T  T  L       +++    P+GR GE  EV+ +V FL   PAA+YI
Sbjct: 201 ITVNAVAPGFIATDMTSELAA-----EKLLEVIPLGRYGEAAEVAGVVRFLAADPAAAYI 255

Query: 252 TGQTVCIDGG 261
           TGQ + IDGG
Sbjct: 256 TGQVINIDGG 265

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score =  176 bits (448), Expect = 2e-54
 Identities = 63/290 (21%), Positives = 111/290 (38%), Gaps = 33/290 (11%)

Query: 1   MAQPQQTESHSR---QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVH-TCSRTETE 56
           M        HS         ++   A+VTG  K +G A+  +L   G  V      +   
Sbjct: 1   MGSSHHHHHHSSGLVPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEA 60

Query: 57  LNECIHHL-QMKGLKVTGSVCDVSSRPQR----QTLINTVSSLFNGKLNIFVNNVGTSVL 111
                  L + +         D+++        + +IN+    F G+ ++ VNN      
Sbjct: 61  AVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCFRAF-GRCDVLVNNASAFYP 119

Query: 112 KPTLEYNAEDFSL----------VMSTNFESAFHLCQLAHPLLRASGAA------SIVLM 155
            P ++ + ED S           ++ TN  + F L        + +         SIV +
Sbjct: 120 TPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNL 179

Query: 156 SSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN 214
             A+      +  ++Y+  K A+  L ++ A E A   IR N VAP     P        
Sbjct: 180 CDAMV-DQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMG---- 234

Query: 215 GKFVDEVKSRTPMGRL-GEPKEVSSLVAFLCMPAASYITGQTVCIDGGFT 263
            +  D+ + + P+GR     ++++  V FL   +A YITG  + +DGG +
Sbjct: 235 EEEKDKWRRKVPLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLS 284

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score =  175 bits (445), Expect = 4e-54
 Identities = 71/262 (27%), Positives = 119/262 (45%), Gaps = 15/262 (5%)

Query: 7   TESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATV-HTCSRTETELNECIHHLQ 65
            E+ ++          A VTGG  GLG A+   L   G  V  + S     ++  + H +
Sbjct: 12  LEAQTQGPGSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHER 71

Query: 66  MKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVG----TSVLKPTLEYNAED 121
             G        DV+     +     V + F GK+++ +NN G     + +K T      D
Sbjct: 72  DAGRDFKAYAVDVADFESCERCAEKVLADF-GKVDVLINNAGITRDATFMKMT----KGD 126

Query: 122 FSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQL 180
           +  VM T+ ++ F++ +     +       IV + S  G      G   Y++ K  ++  
Sbjct: 127 WDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNG-SRGAFGQANYASAKAGIHGF 185

Query: 181 AKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVD-EVKSRTPMGRLGEPKEVSSL 239
            K LA E AK  I  N+V+P Y+ T   E +      ++ ++  + P+GRLG P EV++L
Sbjct: 186 TKTLALETAKRGITVNTVSPGYLATAMVEAV--PQDVLEAKILPQIPVGRLGRPDEVAAL 243

Query: 240 VAFLCMPAASYITGQTVCIDGG 261
           +AFLC   A ++TG  + I+GG
Sbjct: 244 IAFLCSDDAGFVTGADLAINGG 265

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  174 bits (444), Expect = 6e-54
 Identities = 58/259 (22%), Positives = 108/259 (41%), Gaps = 16/259 (6%)

Query: 2   AQPQQTESHSRQNR--WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNE 59
                +      ++   SL G  A+VTG ++G+G A+  +L  LGA V   +R   +L  
Sbjct: 9   HHHHSSGHIDDDDKHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRA 68

Query: 60  CIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVG-TSVLKPTLEYN 118
               +   G +     CD+S           V +   G+ ++ VNN G      P     
Sbjct: 69  VEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAH-GRCDVLVNNAGVGWFGGPLHTMK 127

Query: 119 AEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAM 177
             ++  +++ N ++ + L +   P + A+    I+ +SS  G          Y+A+K  +
Sbjct: 128 PAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKN-PVADGAAYTASKWGL 186

Query: 178 NQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVS 237
           N L  + A E  +  +R + VAP  +RT F   L        +   ++ +G + EP +++
Sbjct: 187 NGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLS------AK---KSALGAI-EPDDIA 236

Query: 238 SLVAFLCMPAASYITGQTV 256
            +VA L   A      + +
Sbjct: 237 DVVALLATQADQSFISEVL 255

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score =  173 bits (441), Expect = 1e-53
 Identities = 76/248 (30%), Positives = 127/248 (51%), Gaps = 16/248 (6%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
            L G T+L+TG + G+G A+   L  LG+ V      E +L    + L       T  VC
Sbjct: 11  DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL---KDNYTIEVC 67

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           +++++ +   LI+         L+I V N G +     +    +DF  V+  N ++ F L
Sbjct: 68  NLANKEECSNLISKT-----SNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFIL 122

Query: 137 CQLA-HPLLRA-SGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEWAKDNI 193
            + A   +++   G   I+ +SS +G ++ N G   Y A+K  +  + K+L+ E A   I
Sbjct: 123 NREAIKKMIQKRYG--RIINISSIVG-IAGNPGQANYCASKAGLIGMTKSLSYEVATRGI 179

Query: 194 RTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG 253
             N+VAP +I++  T+ L  N K  + +  + P+G  G P++V+  VAFL    ASYITG
Sbjct: 180 TVNAVAPGFIKSDMTDKL--NEKQREAIVQKIPLGTYGIPEDVAYAVAFLASNNASYITG 237

Query: 254 QTVCIDGG 261
           QT+ ++GG
Sbjct: 238 QTLHVNGG 245

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score =  172 bits (438), Expect = 2e-53
 Identities = 69/263 (26%), Positives = 109/263 (41%), Gaps = 30/263 (11%)

Query: 7   TESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQM 66
           T + +   +      + LVTGG +G+GLA+ + L+  G  V    R              
Sbjct: 2   TATATEGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF----- 56

Query: 67  KGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTL-----EYNAED 121
                 G   DV+           V     G + + V+N G  +          E   E 
Sbjct: 57  ------GVEVDVTDSDAVDRAFTAVEEHQ-GPVEVLVSNAG--LSADAFLMRMTE---EK 104

Query: 122 FSLVMSTNFESAFHLCQLA-HPLLRA-SGAASIVLMSSALGIVSANVGTV-YSATKGAMN 178
           F  V++ N   AF + Q A   + R   G   ++ + S  G +        Y+A+K  + 
Sbjct: 105 FEKVINANLTGAFRVAQRASRSMQRNKFG--RMIFIGSVSG-LWGIGNQANYAASKAGVI 161

Query: 179 QLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSS 238
            +A+++A E +K N+  N VAP YI T  T  L  + +         P  R+G P EV+ 
Sbjct: 162 GMARSIARELSKANVTANVVAPGYIDTDMTRAL--DERIQQGALQFIPAKRVGTPAEVAG 219

Query: 239 LVAFLCMPAASYITGQTVCIDGG 261
           +V+FL    ASYI+G  + +DGG
Sbjct: 220 VVSFLASEDASYISGAVIPVDGG 242

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score =  173 bits (440), Expect = 3e-53
 Identities = 59/272 (21%), Positives = 105/272 (38%), Gaps = 30/272 (11%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVH-TCSRTETELNECIHHL-QMKGLKVTGS 74
           + +   A++TGG + +G ++   L   G  V      +E      +  L   +       
Sbjct: 8   ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLC 67

Query: 75  VCDVSS----RPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNA----------- 119
             D+S         + +I+     F G+ ++ VNN       P L  +            
Sbjct: 68  KGDLSLSSSLLDCCEDIIDCSFRAF-GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPID 126

Query: 120 EDFSLVMSTNFESAFHLCQLAHPLLRASGAA-----SIVLMSSALGIVSANVG-TVYSAT 173
              + +  +N  +   L +         GA      S+V +  A+  +    G  VY+  
Sbjct: 127 AQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDL-PLPGFCVYTMA 185

Query: 174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRL-GE 232
           K A+  L +  A E A  +IR N+VAP     P   P     +  +E + + P+G+    
Sbjct: 186 KHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP----QETQEEYRRKVPLGQSEAS 241

Query: 233 PKEVSSLVAFLCMPAASYITGQTVCIDGGFTV 264
             +++  +AFL    A YITG T+ +DGG  +
Sbjct: 242 AAQIADAIAFLVSKDAGYITGTTLKVDGGLIL 273

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score =  172 bits (439), Expect = 7e-53
 Identities = 79/255 (30%), Positives = 116/255 (45%), Gaps = 14/255 (5%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETE-LNECIHHLQMKGLKVTGSVC 76
           L+G   L+TGG  G+G AV    +  GA +      E    NE   +++ +G+K      
Sbjct: 45  LKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPG 104

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLE-YNAEDFSLVMSTNFESAFH 135
           D+S     + ++        G LNI VNNV     +  LE   AE        N  S FH
Sbjct: 105 DLSDEQHCKDIVQETVRQL-GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFH 163

Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVGTV----YSATKGAMNQLAKNLACEWAKD 191
           + + A   L+      I+  +S    + A  G      YSATKGA+    ++L+    + 
Sbjct: 164 VTKAALSHLKQGD--VIINTAS----IVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQK 217

Query: 192 NIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI 251
            IR N VAP  I TP   P   + K V +  S  PM R G+P E++    +L    +SY+
Sbjct: 218 GIRVNGVAPGPIWTPLI-PSSFDEKKVSQFGSNVPMQRPGQPYELAPAYVYLASSDSSYV 276

Query: 252 TGQTVCIDGGFTVNG 266
           TGQ + ++GG  VNG
Sbjct: 277 TGQMIHVNGGVIVNG 291

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score =  170 bits (434), Expect = 1e-52
 Identities = 73/250 (29%), Positives = 120/250 (48%), Gaps = 21/250 (8%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATVH-TCSRTETELNECIHHLQMKGLK-VTGSVCDVS 79
            AL+TG ++G+G A+   L+  G  +     +   +  E     + +G   V     ++ 
Sbjct: 3   KALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLL 62

Query: 80  SRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTL-----EYNAEDFSLVMSTNFESAF 134
                  L++  + +  G L+  VNN G  + + TL     +   ED+  V+  N  + F
Sbjct: 63  EAEAATALVHQAAEVL-GGLDTLVNNAG--ITRDTLLVRMKD---EDWEAVLEANLSAVF 116

Query: 135 HLCQLA-HPLLRA-SGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEWAKD 191
              + A   +++A  G   IV ++S +G +  N G   Y A+K  +    + +A E+A+ 
Sbjct: 117 RTTREAVKLMMKARFG--RIVNITSVVG-ILGNPGQANYVASKAGLIGFTRAVAKEYAQR 173

Query: 192 NIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI 251
            I  N+VAP +I T  TE L    +  +    + P GR G P+EV+  VAFL    A YI
Sbjct: 174 GITVNAVAPGFIETEMTERL--PQEVKEAYLKQIPAGRFGRPEEVAEAVAFLVSEKAGYI 231

Query: 252 TGQTVCIDGG 261
           TGQT+C+DGG
Sbjct: 232 TGQTLCVDGG 241

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  170 bits (433), Expect = 1e-52
 Identities = 49/248 (19%), Positives = 85/248 (34%), Gaps = 17/248 (6%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           +     +VTG   GLG A+   L   G  V    R    L +    L   G  V G V D
Sbjct: 1   MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL---GNAVIGIVAD 57

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           ++                 G   + ++  GT    P   Y AE    VM +N  S   + 
Sbjct: 58  LAHHEDVDVAFAAAVEWG-GLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVA 116

Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNS 197
           Q    L+   G   +  + S+   V     ++Y A+K  M    ++L  E     +R  +
Sbjct: 117 QQTVRLIGERGGV-LANVLSSAAQVGKANESLYCASKWGMRGFLESLRAELKDSPLRLVN 175

Query: 198 VAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAF-LCMPAASYITGQTV 256
           + P  IR+ F +                       P++ ++ +   L   ++ ++T   +
Sbjct: 176 LYPSGIRSEFWDNT-----------DHVDPSGFMTPEDAAAYMLDALEARSSCHVTDLFI 224

Query: 257 CIDGGFTV 264
             + G   
Sbjct: 225 GRNEGHHH 232

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score =  172 bits (438), Expect = 2e-52
 Identities = 70/274 (25%), Positives = 117/274 (42%), Gaps = 29/274 (10%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGA------------TVHTCSRTETELNECIHHLQ 65
           LQG  A +TG  +G G      L+  GA             +     +  EL E +  ++
Sbjct: 44  LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVE 103

Query: 66  MKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLV 125
            +G ++     DV      Q +++   + F G ++I V+NVG S     +    + +S +
Sbjct: 104 EQGRRIIARQADVRDLASLQAVVDEALAEF-GHIDILVSNVGISNQGEVVSLTDQQWSDI 162

Query: 126 MSTNFESAFHLCQLAHPLLRASGA-ASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKN 183
           + TN   A+H C+   P +   G   S++ +SS +G+     G   Y+A+K  +  L  +
Sbjct: 163 LQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLR-GAPGQSHYAASKHGVQGLMLS 221

Query: 184 LACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMG-------------RL 230
           LA E  + NIR NSV P  + T           F+  +++ T                  
Sbjct: 222 LANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLPIPW 281

Query: 231 GEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTV 264
            EP++VS+ VA+L    A YI G  + +DGG   
Sbjct: 282 VEPEDVSNAVAWLASDEARYIHGAAIPVDGGQLA 315

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score =  171 bits (436), Expect = 2e-52
 Identities = 66/250 (26%), Positives = 107/250 (42%), Gaps = 6/250 (2%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATV--HTCSRTETELNECIHHLQMKGLKVTGSV 75
           L+   ALVTGG  G+G A     +  GA V  +     E +  +    ++  G K     
Sbjct: 47  LKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLP 106

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLE-YNAEDFSLVMSTNFESAF 134
            D+S     ++L++       G L+I     G     P ++   +E F    + N  + F
Sbjct: 107 GDLSDESFARSLVHKAREAL-GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALF 165

Query: 135 HLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIR 194
            + Q A PLL      SI+  SS      +     Y+ATK A+   ++ LA + A+  IR
Sbjct: 166 WITQEAIPLLPKGA--SIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIR 223

Query: 195 TNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ 254
            N VAP  I T            + +   +TPM R G+P E++ +  +L    +SY+T +
Sbjct: 224 VNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAE 283

Query: 255 TVCIDGGFTV 264
              + GG  +
Sbjct: 284 VHGVCGGEHL 293

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score =  170 bits (432), Expect = 2e-52
 Identities = 75/253 (29%), Positives = 116/253 (45%), Gaps = 30/253 (11%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           S    + LVTGG +G+GLA+    +  G  V    R+                      C
Sbjct: 18  SHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-----------GFLAVKC 66

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTL-----EYNAEDFSLVMSTNFE 131
           D++   Q +     +     G + + + N G  V K  L     E   EDF+ V+ TN  
Sbjct: 67  DITDTEQVEQAYKEIEETH-GPVEVLIANAG--VTKDQLLMRMSE---EDFTSVVETNLT 120

Query: 132 SAFHLCQLA-HPLLRA-SGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEW 188
             F + + A   +LRA  G   +VL+SS +G +  + G   Y+A+K  +   A++LA E 
Sbjct: 121 GTFRVVKRANRAMLRAKKG--RVVLISSVVG-LLGSAGQANYAASKAGLVGFARSLAREL 177

Query: 189 AKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAA 248
              NI  N VAP ++ T  T+ L    +    + S+ P+GR   P+E+++ V FL    A
Sbjct: 178 GSRNITFNVVAPGFVDTDMTKVL--TDEQRANIVSQVPLGRYARPEEIAATVRFLASDDA 235

Query: 249 SYITGQTVCIDGG 261
           SYITG  + +DGG
Sbjct: 236 SYITGAVIPVDGG 248

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score =  170 bits (434), Expect = 3e-52
 Identities = 70/272 (25%), Positives = 108/272 (39%), Gaps = 30/272 (11%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATV------------HTCSRTETELNECIHHLQ 65
           L G  A +TG  +G G A    L+  GA +                 T  EL   +  ++
Sbjct: 11  LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVE 70

Query: 66  MKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLV 125
             G ++     DV  R      +        G+L+I V N G + +    +     +  V
Sbjct: 71  DIGSRIVARQADVRDRESLSAALQAGLDEL-GRLDIVVANAGIAPMSAGDD----GWHDV 125

Query: 126 MSTNFESAFHLCQLAHPLLRASGA-ASIVLMSSALGIV---SANVGTV-YSATKGAMNQL 180
           +  N    +H  ++A P L   G   SIVL+SS+ G+    SA+ G+V Y A K  +  L
Sbjct: 126 IDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVGL 185

Query: 181 AKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMG--------RLGE 232
            +  A   A   IR NS+ P  + TP                +    G         +  
Sbjct: 186 MRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMPVEVLA 245

Query: 233 PKEVSSLVAFLCMPAASYITGQTVCIDGGFTV 264
           P++V++ VA+L    A YITG T+ +D GF  
Sbjct: 246 PEDVANAVAWLVSDQARYITGVTLPVDAGFLN 277

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  167 bits (425), Expect = 4e-51
 Identities = 50/256 (19%), Positives = 97/256 (37%), Gaps = 19/256 (7%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSML---GATVHTCSRTETELNECIHHL--QMKGLKV 71
            L     ++TG ++G G A+  +L+ L   G+ +   +R+E+ L +    L  Q   LKV
Sbjct: 3   GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKV 62

Query: 72  TGSVCDVSSRPQRQTLINTVSSLFN---GKLNIFVNNVGT---SVLKPTLEYNAEDFSLV 125
             +  D+ +    Q L++ V  L      +  + +NN  T            +  + +  
Sbjct: 63  VLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNY 122

Query: 126 MSTNFESAFHLCQLAHPLLRASGAA--SIVLMSSALGIVSANVGTVYSATKGAMNQLAKN 183
            + N  S   L        + S     ++V +SS   +       +Y A K A + L + 
Sbjct: 123 WALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQV 182

Query: 184 LACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKF---VDEVKSRTPMGRLGEPKEVSSLV 240
           LA E  + ++R  S AP  +     +      K      +++     G L +    +  +
Sbjct: 183 LAAE--EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKL 240

Query: 241 AFLCMPAASYITGQTV 256
             L     ++ +G  V
Sbjct: 241 LGLL-QKDTFQSGAHV 255

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score =  163 bits (414), Expect = 1e-49
 Identities = 37/252 (14%), Positives = 71/252 (28%), Gaps = 26/252 (10%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           S +    LV GG   LG   V+        V +    E E            + V  +  
Sbjct: 4   SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEAS-------ASVIVKMTDS 56

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGT-SVLKPTLEYNAEDFSLVMSTNFESAFH 135
                 Q    +  +      K++  +   G  +      +   ++  L+   +  ++  
Sbjct: 57  FTEQADQVTAEVGKLLGD--QKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTI 114

Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWA--KDNI 193
              LA   L+  G   + L  +   +        Y   KGA++QL ++LA + +      
Sbjct: 115 SSHLATKHLKEGG--LLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGA 172

Query: 194 RTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG 253
              +V P  + TP     +                     + +               +G
Sbjct: 173 AAIAVLPVTLDTPMNRKSMPEA----------DFSSWTPLEFLVETFHDWITGNKRPNSG 222

Query: 254 QT--VCIDGGFT 263
               V    G T
Sbjct: 223 SLIQVVTTDGKT 234

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score =  161 bits (409), Expect = 2e-48
 Identities = 67/288 (23%), Positives = 107/288 (37%), Gaps = 47/288 (16%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVH-TCSRTETELNECIHHLQMK-GLKVTGS 74
           +     ALVTG  K LG ++ E L   G  V     R+  E N     L  +        
Sbjct: 6   APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITV 65

Query: 75  VCDVSS-----------------RPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEY 117
             D+S+                   +   L+    + + G+ ++ VNN  +    P L  
Sbjct: 66  QADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRN 124

Query: 118 NAEDFSL--------------VMSTNFESAFHLCQLAHPLLRASGAA------SIVLMSS 157
           + +                  +  +N  + + L +     +  + A       SI+ M  
Sbjct: 125 DEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVD 184

Query: 158 ALGIVSANVG-TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGK 216
           A+      +G T+Y+  KGA+  L ++ A E A   IR N V P         P      
Sbjct: 185 AMT-NQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMP----PA 239

Query: 217 FVDEVKSRTPM-GRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFT 263
             +  +S+ P+  R     EVS +V FLC   A YITG  V +DGG++
Sbjct: 240 VWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 287

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score =  165 bits (419), Expect = 2e-48
 Identities = 68/250 (27%), Positives = 112/250 (44%), Gaps = 17/250 (6%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATV--HTCSRTETELNECIHHLQMKGLKVTGSV 75
           L G  A+VTG  +G+G  + E  +  GATV          +L           +  T   
Sbjct: 211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKR-----VADKVGGTALT 265

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYN--AEDFSLVMSTNFESA 133
            DV++      +   V+    GK++I VNN G  + +  L  N   + +  V++ N  + 
Sbjct: 266 LDVTADDAVDKITAHVTEHHGGKVDILVNNAG--ITRDKLLANMDEKRWDAVIAVNLLAP 323

Query: 134 FHLCQ-LAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAKD 191
             L + L        G   ++ +SS  GI + N G T Y+ TK  M  LA+ LA   A  
Sbjct: 324 QRLTEGLVGNGTIGEGG-RVIGLSSMAGI-AGNRGQTNYATTKAGMIGLAEALAPVLADK 381

Query: 192 NIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI 251
            I  N+VAP +I T  TE +       +  +    + + G+P +V+ L+A+   PA++ +
Sbjct: 382 GITINAVAPGFIETKMTEAI--PLATREVGRRLNSLFQGGQPVDVAELIAYFASPASNAV 439

Query: 252 TGQTVCIDGG 261
           TG T+ + G 
Sbjct: 440 TGNTIRVCGQ 449

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score =  158 bits (402), Expect = 8e-48
 Identities = 38/250 (15%), Positives = 67/250 (26%), Gaps = 17/250 (6%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGAT-VHTCSRTETELNECIHHLQMKGLKVTGSV 75
            L     +      G+GL    EL            R E              + +T   
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHT 61

Query: 76  CDVS-SRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAF 134
            DV+    + + L+  +       ++I +N  G  +L              ++ NF    
Sbjct: 62  YDVTVPVAESKKLLKKIFDQL-KTVDILINGAG--ILDD------HQIERTIAINFTGLV 112

Query: 135 HLCQLAHPLL---RASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKD 191
           +            +      I  + S  G  + +   VYSA+K A+     +LA      
Sbjct: 113 NTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPIT 172

Query: 192 NIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI 251
            +   S+ P   RTP              V            ++             +  
Sbjct: 173 GVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKA---IEANK 229

Query: 252 TGQTVCIDGG 261
            G    +D G
Sbjct: 230 NGAIWKLDLG 239

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score =  158 bits (402), Expect = 4e-47
 Identities = 67/288 (23%), Positives = 106/288 (36%), Gaps = 47/288 (16%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVH-TCSRTETELNECIHHLQMK-GLKVTGS 74
           +     ALVTG  K LG ++ E L   G  V     R+  E N     L  +        
Sbjct: 43  APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITV 102

Query: 75  VCDVS-----------------SRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEY 117
             D+S                    +   L+    + + G+ ++ VNN  +    P L  
Sbjct: 103 QADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRN 161

Query: 118 NAEDFSL--------------VMSTNFESAFHLCQLAHPLLRASGAA------SIVLMSS 157
           + +                  +  +N  + + L +     +  + A       SI+ M  
Sbjct: 162 DEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVD 221

Query: 158 ALGIVSANVG-TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGK 216
           A+      +G T+Y+  KGA+  L ++ A E A   IR N V P         P      
Sbjct: 222 AMT-NQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMP----PA 276

Query: 217 FVDEVKSRTPM-GRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFT 263
             +  +S+ P+  R     EVS +V FLC   A YITG  V +DGG++
Sbjct: 277 VWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 324

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score =  158 bits (401), Expect = 1e-46
 Identities = 54/259 (20%), Positives = 93/259 (35%), Gaps = 24/259 (9%)

Query: 14  NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETE-------LNECIHHLQM 66
           N   L G T  +TG ++G+G A+  + +  GA +   ++T          +      ++ 
Sbjct: 39  NTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEA 98

Query: 67  KGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVM 126
            G K    + DV    Q    +      F G ++I VNN     L  TL+   +   L+M
Sbjct: 99  VGGKALPCIVDVRDEQQISAAVEKAIKKF-GGIDILVNNASAISLTNTLDTPTKRLDLMM 157

Query: 127 STNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG--TVYSATKGAMNQLAKNL 184
           + N    +   +   P L+ S  A I+ +S  L +          Y+  K  M+     +
Sbjct: 158 NVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGM 217

Query: 185 ACEWAKDNIRTNSVAP-WYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFL 243
           A E+ K  I  N++ P   I T   + L G G             +  +   ++     +
Sbjct: 218 AEEF-KGEIAVNALWPKTAIHTAAMDMLGGPG----------IESQCRKVDIIADAAYSI 266

Query: 244 CMPAASYITGQTVCIDGGF 262
                   TG    ID   
Sbjct: 267 F-QKPKSFTGN-FVIDENI 283

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  152 bits (387), Expect = 1e-45
 Identities = 39/242 (16%), Positives = 85/242 (35%), Gaps = 7/242 (2%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           + +  T  V G    +G  + ++ +  G TV    R   +L   +  ++  G ++     
Sbjct: 4   TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSL 63

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           D  +  +    +N   +     L + + NVG +V  P LE     F  V      + F  
Sbjct: 64  DARNEDEVTAFLNAADAH--APLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVS 121

Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIR-T 195
            + +  L+ A G   I    +   +   +    +++ K  +  +A+++A E    NI   
Sbjct: 122 GRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARELMPKNIHVA 181

Query: 196 NSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFL-CMPAASYITGQ 254
           + +    + T +          +    +      L  P  V+     L   P +++    
Sbjct: 182 HLIIDSGVDTAWVRERREQ---MFGKDALANPDLLMPPAAVAGAYWQLYQQPKSAWTFEM 238

Query: 255 TV 256
            +
Sbjct: 239 EI 240

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score =  152 bits (385), Expect = 1e-45
 Identities = 40/249 (16%), Positives = 83/249 (33%), Gaps = 27/249 (10%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           +     +V GG   LG A++E     G TV     +  +  +    +            +
Sbjct: 1   MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVD----------GN 50

Query: 78  VSSRPQRQTLIN-TVSSLFNGKLNIFVNNVGTSVLKPTL-EYNAEDFSLVMSTNFESAFH 135
            +   Q Q+++  T SSL   +++      G         +   ++  L++  +  S+  
Sbjct: 51  KNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAI 110

Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWA--KDNI 193
             +LA   L+  G   + L  +A  +        Y   K A++ L  +LA + +   DN 
Sbjct: 111 AAKLATTHLKPGG--LLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNS 168

Query: 194 RTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLC-MPAASYIT 252
              ++ P  + TP     + N                     +S  +       ++   +
Sbjct: 169 AVLTIMPVTLDTPMNRKWMPNADH----------SSWTPLSFISEHLLKWTTETSSRPSS 218

Query: 253 GQTVCIDGG 261
           G  + I   
Sbjct: 219 GALLKITTE 227

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score =  151 bits (384), Expect = 3e-45
 Identities = 49/243 (20%), Positives = 91/243 (37%), Gaps = 21/243 (8%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGA-------TVHTCSRTETELNECIHHLQMKGLKVTGS 74
             L+TG  KG+G A+  E +            +   SRT  +L +     + +G      
Sbjct: 4   ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTI 63

Query: 75  VCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAF 134
             D+S     + L   +   + G ++  VNN G        +   EDF   M+TN +  F
Sbjct: 64  TADISDMADVRRLTTHIVERY-GHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTF 122

Query: 135 HLCQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAKDNI 193
            L Q    L+    +  I  ++S      A    ++Y  +K     L + +     K N+
Sbjct: 123 FLTQALFALMERQHSGHIFFITSVAATK-AFRHSSIYCMSKFGQRGLVETMRLYARKCNV 181

Query: 194 RTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG 253
           R   V P  + TP         K  DE++       +  P+++++ V    +  +  +  
Sbjct: 182 RITDVQPGAVYTPMWG------KVDDEMQ-----ALMMMPEDIAAPVVQAYLQPSRTVVE 230

Query: 254 QTV 256
           + +
Sbjct: 231 EII 233

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score =  151 bits (384), Expect = 7e-45
 Identities = 60/273 (21%), Positives = 104/273 (38%), Gaps = 22/273 (8%)

Query: 2   AQPQQTESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECI 61
            + Q     S       +G +A+V+GG  GLG A V  L   G  V        +     
Sbjct: 12  LEAQTQGPGSMVTIKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALA 71

Query: 62  HHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNA-- 119
             L   G +      +V+S       I   + L        V + G  V +  ++ +   
Sbjct: 72  DEL---GNRAEFVSTNVTSEDSVLAAIEAANQLG-RLRYAVVAHGGFGVAQRIVQRDGSP 127

Query: 120 ---EDFSLVMSTNFESAFHLCQLAHPLLRASGAA------SIVLMSSALGIVSANVG-TV 169
                F+  +       +++ +L    + A+         ++VL +S  G     +G T 
Sbjct: 128 ADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYE-GQIGQTA 186

Query: 170 YSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPM-G 228
           Y+A K  +  L    A + +   IR N++AP  ++TP  E +    + + +  +  P   
Sbjct: 187 YAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESV--GEEALAKFAANIPFPK 244

Query: 229 RLGEPKEVSSLVAFLCMPAASYITGQTVCIDGG 261
           RLG P E +   AFL      YI G+ + +DG 
Sbjct: 245 RLGTPDEFADAAAFLL--TNGYINGEVMRLDGA 275

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score =  145 bits (369), Expect = 2e-43
 Identities = 47/239 (19%), Positives = 83/239 (34%), Gaps = 40/239 (16%)

Query: 20  GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVS 79
            M  L+ G +  LG AV E L    A V T  R   ++                   D++
Sbjct: 3   AMKILLIGASGTLGSAVKERLEK-KAEVITAGRHSGDV-----------------TVDIT 44

Query: 80  SRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQL 139
           +    + +   V     GK++  V+  G++   P  E   E  ++ +S+      +L  L
Sbjct: 45  NIDSIKKMYEQV-----GKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLL 99

Query: 140 AHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVA 199
               L   G  S  L +  +       G   +   GA+   AK+ A E  +  IR N+V+
Sbjct: 100 GIDSLNDKG--SFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEMPR-GIRINTVS 156

Query: 200 PWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCI 258
           P  +   + +       F +      P  ++    E S              TG++  +
Sbjct: 157 PNVLEESWDK----LEPFFEGFLP-VPAAKVARAFEKS---------VFGAQTGESYQV 201

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  143 bits (364), Expect = 3e-42
 Identities = 41/249 (16%), Positives = 93/249 (37%), Gaps = 16/249 (6%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG---LKVTG 73
             Q   A++TG ++G+G  +   L+  G  V   +R++  L +    +        +   
Sbjct: 4   EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIV 63

Query: 74  SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESA 133
              D++   +  T I  +   + G ++I VN     +    L    ++F  +M  N  + 
Sbjct: 64  LPLDITDCTKADTEIKDIHQKY-GAVDILVNAAAMFMDGS-LSEPVDNFRKIMEINVIAQ 121

Query: 134 FHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNI 193
           + + +    +++      I  ++S         G +Y +TK A+  LA++L  E A   I
Sbjct: 122 YGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAPLGI 181

Query: 194 RTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLC-MPAASYIT 252
           R  ++ P ++ T              +  +      + +P ++ + +  L  +     I 
Sbjct: 182 RVTTLCPGWVNTDMA----------KKAGTPFKDEEMIQPDDLLNTIRCLLNLSENVCIK 231

Query: 253 GQTVCIDGG 261
                +   
Sbjct: 232 DIVFEMKKS 240

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score =  142 bits (360), Expect = 2e-41
 Identities = 67/259 (25%), Positives = 108/259 (41%), Gaps = 23/259 (8%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           S++G+ A++TGG  GLGLA  E L   GA+        +        L   G     +  
Sbjct: 9   SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL---GNNCVFAPA 65

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNA------EDFSLVMSTNF 130
           DV+S    QT +      F G++++ VN  G +V   T           EDF  V+  N 
Sbjct: 66  DVTSEKDVQTALALAKGKF-GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNL 124

Query: 131 ESAFHLCQLAHPLLRASGAAS------IVLMSSALGIVSANVG-TVYSATKGAMNQLAKN 183
              F++ +L    +  +          I+  +S        VG   YSA+KG +  +   
Sbjct: 125 MGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAF-EGQVGQAAYSASKGGIVGMTLP 183

Query: 184 LACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPM-GRLGEPKEVSSLVAF 242
           +A + A   IR  ++AP    TP    L    K  + + S+ P   RLG+P E + LV  
Sbjct: 184 IARDLAPIGIRVMTIAPGLFGTPLLTSL--PEKVCNFLASQVPFPSRLGDPAEYAHLVQA 241

Query: 243 LCMPAASYITGQTVCIDGG 261
           +      ++ G+ + +DG 
Sbjct: 242 II--ENPFLNGEVIRLDGA 258

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score =  141 bits (359), Expect = 2e-41
 Identities = 62/256 (24%), Positives = 105/256 (41%), Gaps = 21/256 (8%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L+    +VTG + GLG AV   L+  GATV           E    L   G  V     D
Sbjct: 5   LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL---GAAVRFRNAD 61

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTS----VLKPTLEYNAEDFSLVMSTNFESA 133
           V++       +      F G ++  VN  GT+    +L  +  +  + F+  ++ N    
Sbjct: 62  VTNEADATAALAFAKQEF-GHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGT 120

Query: 134 FHLCQLAHPLLRASGAAS------IVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLAC 186
           F++ +LA  ++      +      IV  +S        +G   Y+A+KG +  L    A 
Sbjct: 121 FNMIRLAAEVMSQGEPDADGERGVIVNTASIAAF-DGQIGQAAYAASKGGVAALTLPAAR 179

Query: 187 EWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPM-GRLGEPKEVSSLVAFLCM 245
           E A+  IR  ++AP    TP    +       D + +  P   RLG  +E ++LV  +C 
Sbjct: 180 ELARFGIRVVTIAPGIFDTPMMAGM--PQDVQDALAASVPFPPRLGRAEEYAALVKHIC- 236

Query: 246 PAASYITGQTVCIDGG 261
              + + G+ + +DG 
Sbjct: 237 -ENTMLNGEVIRLDGA 251

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score =  138 bits (349), Expect = 7e-40
 Identities = 57/258 (22%), Positives = 100/258 (38%), Gaps = 27/258 (10%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           ++   A+VTGG  GLGLA  + L   GA V        ++   +      G +   +  D
Sbjct: 7   IRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADL------GDRARFAAAD 60

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNA----EDFSLVMSTNFESA 133
           V+      + ++   ++  G L I VN  GT      L  +       F  ++  N   +
Sbjct: 61  VTDEAAVASALDLAETM--GTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGS 118

Query: 134 FHLCQLAHPLLRASGAAS--------IVLMSSALGIVSANVG-TVYSATKGAMNQLAKNL 184
           F++ +LA   +  +            I+  +S        +G   YSA+KG +  +   +
Sbjct: 119 FNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAF-DGQIGQAAYSASKGGVVGMTLPI 177

Query: 185 ACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPM-GRLGEPKEVSSLVAFL 243
           A + A   IR  ++AP    TP    L    +    +  + P   RLG P E  +L   +
Sbjct: 178 ARDLASHRIRVMTIAPGLFDTPLLASL--PEEARASLGKQVPHPSRLGNPDEYGALAVHI 235

Query: 244 CMPAASYITGQTVCIDGG 261
                  + G+ + +DG 
Sbjct: 236 I--ENPMLNGEVIRLDGA 251

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  138 bits (350), Expect = 7e-40
 Identities = 53/225 (23%), Positives = 82/225 (36%), Gaps = 16/225 (7%)

Query: 15  RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGS 74
           R S+ G   L+TG   G+G     E + L + +      +  L E     +  G KV   
Sbjct: 26  RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTF 85

Query: 75  VCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAF 134
           V D S+R    +    V +   G ++I VNN G                     N  + F
Sbjct: 86  VVDCSNREDIYSSAKKVKAEI-GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHF 144

Query: 135 HLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWA---KD 191
              +   P +  +    IV ++SA G VS      Y ++K A     K L  E A     
Sbjct: 145 WTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQIT 204

Query: 192 NIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEV 236
            ++T  + P ++ T F +               T +G   EP+EV
Sbjct: 205 GVKTTCLCPNFVNTGFIK------------NPSTSLGPTLEPEEV 237

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score =  135 bits (342), Expect = 5e-39
 Identities = 62/252 (24%), Positives = 97/252 (38%), Gaps = 31/252 (12%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
           +ALVTGG  GLG A    L   G  V             +  L+ +G  +     DV+  
Sbjct: 4   SALVTGGASGLGRAAALALKARGYRV------------VVLDLRREGEDLIYVEGDVTRE 51

Query: 82  PQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNA----EDFSLVMSTNFESAFHLC 137
              +  +          L   V+  G  + +  L        E F  V+  N    F++ 
Sbjct: 52  EDVRRAVARAQEE--APLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVL 109

Query: 138 QLAHPLLRASGAAS------IVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAK 190
           +LA   +R +   +      IV  +S        +G   Y+A+KG +  L    A E A 
Sbjct: 110 RLAAWAMRENPPDAEGQRGVIVNTASVAA-FEGQIGQAAYAASKGGVVALTLPAARELAG 168

Query: 191 DNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPM-GRLGEPKEVSSLVAFLCMPAAS 249
             IR  +VAP    TP  + L    K    + ++ P   RLG P+E ++LV  +      
Sbjct: 169 WGIRVVTVAPGLFDTPLLQGL--PEKAKASLAAQVPFPPRLGRPEEYAALVLHIL--ENP 224

Query: 250 YITGQTVCIDGG 261
            + G+ V +DG 
Sbjct: 225 MLNGEVVRLDGA 236

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  136 bits (344), Expect = 1e-38
 Identities = 58/243 (23%), Positives = 93/243 (38%), Gaps = 5/243 (2%)

Query: 2   AQPQQTESHSRQNRW--SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNE 59
               QT+     + +     G  A+VTGG  G+GLA   E +  GA +      +  L +
Sbjct: 11  TLEAQTQGPGSMDGFLSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQ 70

Query: 60  CIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNA 119
            ++ L+ +G    G VCDV    +   L +    L  G +++  +N G  V  P  + N 
Sbjct: 71  AVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLL-GGVDVVFSNAGIVVAGPLAQMNH 129

Query: 120 EDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIVSANVGTVYSATKGAMN 178
           +D+  V+  +   + H  +   P L   G    I   +S  G+V       Y   K  + 
Sbjct: 130 DDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVV 189

Query: 179 QLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSS 238
            LA+ LA E   + I  + + P  + T             D   S TP G  G       
Sbjct: 190 GLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRG-ADYGMSATPEGAFGPLPTQDE 248

Query: 239 LVA 241
            V+
Sbjct: 249 SVS 251

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score =  133 bits (336), Expect = 5e-38
 Identities = 52/241 (21%), Positives = 97/241 (40%), Gaps = 16/241 (6%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           SL+   A+VTG T G+G+ +V++LS          R    L      L  +   V     
Sbjct: 2   SLKKKIAVVTGATGGMGIEIVKDLSRDHIVY-ALGRNPEHLAA----LA-EIEGVEPIES 55

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           D+      +  ++ + +L    ++  V+    +        +  ++   +  N      L
Sbjct: 56  DIVKEVLEEGGVDKLKNL--DHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAEL 113

Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTN 196
            +   P LRA  +  ++ ++S  G       T+Y+A+K A+  LA     E A + IR +
Sbjct: 114 SRQLLPALRA-ASGCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRKEEANNGIRVS 172

Query: 197 SVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFL-CMPAASYITGQT 255
           +V+P    TP  + L      +D   +        EPKE+++ + F+      + IT   
Sbjct: 173 TVSPGPTNTPMLQGL------MDSQGTNFRPEIYIEPKEIANAIRFVIDAGETTQITNVD 226

Query: 256 V 256
           V
Sbjct: 227 V 227

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score =  134 bits (340), Expect = 5e-38
 Identities = 62/264 (23%), Positives = 105/264 (39%), Gaps = 29/264 (10%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATV----------HTCSRTETELNECIHHLQM 66
            + G   +VTG   G+G A     +  GA V           + +   +     +  +  
Sbjct: 24  VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITA 83

Query: 67  KGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYN--AEDFSL 124
            G +      +V+   Q   LI T    F G L++ VNN G  +++  +  N   E+F  
Sbjct: 84  AGGEAVADGSNVADWDQAAGLIQTAVETF-GGLDVLVNNAG--IVRDRMIANTSEEEFDA 140

Query: 125 VMSTNFESAFHLCQLAHPLLRASGAA------SIVLMSSALGIVSANVG-TVYSATKGAM 177
           V++ + +  F   + A    R    A       I+  SS  G+   +VG   YSA K  +
Sbjct: 141 VIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQ-GSVGQGNYSAAKAGI 199

Query: 178 NQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVS 237
             L    A E  +  +  N++AP   RT  TE +       + + ++        P+ VS
Sbjct: 200 ATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFA-----EMMATQDQDFDAMAPENVS 253

Query: 238 SLVAFLCMPAASYITGQTVCIDGG 261
            LV +L    A  +TG+   ++GG
Sbjct: 254 PLVVWLGSAEARDVTGKVFEVEGG 277

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  131 bits (331), Expect = 7e-37
 Identities = 47/203 (23%), Positives = 81/203 (39%), Gaps = 5/203 (2%)

Query: 10  HSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG- 68
           +       LQG   +VTG +KG+G  +   L+ +GA V   +R++  L + + H    G 
Sbjct: 18  NEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGA 77

Query: 69  LKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMST 128
                    +      +  +     L  G L++ + N  T+        +       M  
Sbjct: 78  ASAHYIAGTMEDMTFAEQFVAQAGKLM-GGLDMLILNHITNTSLNLFHDDIHHVRKSMEV 136

Query: 129 NFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEW 188
           NF S   L   A P+L+ S   SIV++SS  G V+  +   YSA+K A++    ++  E+
Sbjct: 137 NFLSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEY 195

Query: 189 AKD--NIRTNSVAPWYIRTPFTE 209
           +    N+         I T    
Sbjct: 196 SVSRVNVSITLCVLGLIDTETAM 218

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score =  125 bits (317), Expect = 9e-36
 Identities = 42/222 (18%), Positives = 72/222 (32%), Gaps = 28/222 (12%)

Query: 21  MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSS 80
           M  L+TG T GLG A    L   G  +    R    L E    +  + L       D++ 
Sbjct: 1   MRVLITGATGGLGGAFARALK--GHDLLLSGRRAGALAELAREVGARAL-----PADLAD 53

Query: 81  RPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLA 140
             + + L+        G L++ V+ VG +      E   +    +++ +  +A  +    
Sbjct: 54  ELEAKALLEEA-----GPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVL--- 105

Query: 141 HPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAP 200
               R    A  V   +    V       Y+A KGA+    +    E  ++ +    V  
Sbjct: 106 -KHARFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRL 164

Query: 201 WYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAF 242
             + T    PL              P      P+E +  V  
Sbjct: 165 PAVATGLWAPL------------GGPPKGALSPEEAARKVLE 194

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score =  123 bits (310), Expect = 2e-34
 Identities = 53/193 (27%), Positives = 78/193 (40%), Gaps = 5/193 (2%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
                  L+TG ++G+G A    L   G  V   +R E  L      L  +         
Sbjct: 2   EGMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQA----LAAELEGALPLPG 57

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           DV         +  +   F G+L+  VNN G  V+KP  E   E++ LV+ TN   AF  
Sbjct: 58  DVREEGDWARAVAAMEEAF-GELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLG 116

Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTN 196
            + A P L   G  +IV + S  G      G  Y+A+K  +  LA     +  + N+R  
Sbjct: 117 IRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVV 176

Query: 197 SVAPWYIRTPFTE 209
           +V P  + T F  
Sbjct: 177 NVLPGSVDTGFAG 189

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score =  120 bits (304), Expect = 2e-33
 Identities = 44/192 (22%), Positives = 80/192 (41%), Gaps = 5/192 (2%)

Query: 19  QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHL-QMKGLKVTGSVCD 77
           +   A++TG ++G+G A+   L+  G  +   +R+   L +  H L Q +G++V     D
Sbjct: 1   EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLD 60

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           VS     +     V   F G +++ V N G    K   E + E+F  ++  N    +   
Sbjct: 61  VSKAESVEEFSKKVLERF-GDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTL 119

Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNS 197
           +     L+ +G  ++V  S     +    G  Y +TK A   L +    E    ++R   
Sbjct: 120 KAFLDSLKRTGGLALVTTSDVSARLIPY-GGGYVSTKWAARALVRTFQIE--NPDVRFFE 176

Query: 198 VAPWYIRTPFTE 209
           + P  + T F  
Sbjct: 177 LRPGAVDTYFGG 188

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  120 bits (304), Expect = 9e-33
 Identities = 46/201 (22%), Positives = 89/201 (44%), Gaps = 9/201 (4%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK--GLKVTGS 74
              G TA VTGG  G+G+ +V +L   G  V      +  +++ +  L+ +  G +V G 
Sbjct: 5   DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGV 64

Query: 75  VCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAF 134
             DV+SR   +   + V + F G ++I  NN G ++ +P  E + +D+  ++  N     
Sbjct: 65  QLDVASREGFKMAADEVEARF-GPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVV 123

Query: 135 HLCQLAHPLLRASGAAS------IVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEW 188
           +      P +     A       +V  +S    ++A    +Y+ TK A+  L+++L    
Sbjct: 124 NGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESLHYSL 183

Query: 189 AKDNIRTNSVAPWYIRTPFTE 209
            K  I  + + P  +++    
Sbjct: 184 LKYEIGVSVLCPGLVKSYIYA 204

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  120 bits (304), Expect = 3e-31
 Identities = 63/253 (24%), Positives = 105/253 (41%), Gaps = 22/253 (8%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATV----HTCSRTETELNECIHHLQMKGLKVT 72
             +    ++TG   GLG     E + LGA V       +      N     + +  +   
Sbjct: 5   DFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKN 64

Query: 73  G--SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNF 130
           G  +V D ++      ++ T    F G +++ +NN G        +   +D+ LV+  + 
Sbjct: 65  GGVAVADYNNVLDGDKIVETAVKNF-GTVHVIINNAGILRDASMKKMTEKDYKLVIDVHL 123

Query: 131 ESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWA 189
             AF + + A P  +      IV  SS  G+   N G   Y++ K A+   A+ LA E A
Sbjct: 124 NGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLY-GNFGQANYASAKSALLGFAETLAKEGA 182

Query: 190 KDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAAS 249
           K NI+ N++AP   R+  TE ++             PM     P++V+ LV +L      
Sbjct: 183 KYNIKANAIAPL-ARSRMTESIMP-----------PPMLEKLGPEKVAPLVLYLSSAEN- 229

Query: 250 YITGQTVCIDGGF 262
            +TGQ   +  GF
Sbjct: 230 ELTGQFFEVAAGF 242

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  112 bits (283), Expect = 2e-28
 Identities = 65/265 (24%), Positives = 108/265 (40%), Gaps = 30/265 (11%)

Query: 3   QPQQTESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATV-----HTCSRTETEL 57
           +       S     SL+    L+TG   GLG    +  +  GA V        ++T  E+
Sbjct: 305 RKLPANDASGAPTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEI 364

Query: 58  NECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEY 117
                     G +      DV+   +   +I  V   + G ++I VNN G    +   + 
Sbjct: 365 KA-------AGGEAWPDQHDVAKDSEA--IIKNVIDKY-GTIDILVNNAGILRDRSFAKM 414

Query: 118 NAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGA 176
           + +++  V   +    F+L +LA P         I+ ++S  GI   N G   YS++K  
Sbjct: 415 SKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIY-GNFGQANYSSSKAG 473

Query: 177 MNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEV 236
           +  L+K +A E AK+NI+ N VAP +  T  T  ++           R     L    +V
Sbjct: 474 ILGLSKTMAIEGAKNNIKVNIVAP-HAETAMTLSIM-----------REQDKNLYHADQV 521

Query: 237 SSLVAFLCMPAASYITGQTVCIDGG 261
           + L+ +L       +TG+T  I GG
Sbjct: 522 APLLVYLGTDDV-PVTGETFEIGGG 545

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score =  114 bits (287), Expect = 9e-31
 Identities = 46/203 (22%), Positives = 83/203 (40%), Gaps = 20/203 (9%)

Query: 22  TALVTGGTKGLGLAVVEELSML---GATVHTCSRTETELNECIHHLQMKGLKVTGSVCDV 78
           + L+TG  +GLGL +V+ L  L      + T  R   +  E +  L      +     D+
Sbjct: 23  SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE-LEDLAKNHSNIHILEIDL 81

Query: 79  SSRPQRQTLINTVSSLF-NGKLNIFVNNVGTSVLKPTL-EYNAEDFSLVMSTNFESAFHL 136
            +      L+  +  +  +  LN+  NN G +     +    +++    + TN      L
Sbjct: 82  RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIML 141

Query: 137 CQLAHPLLRAS-----------GAASIVLMSSALGIVSANVG---TVYSATKGAMNQLAK 182
            +   PLL+ +           G A+I+ MSS LG +  N       Y  +K A+N   K
Sbjct: 142 AKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATK 201

Query: 183 NLACEWAKDNIRTNSVAPWYIRT 205
           +L+ +     I   S+ P +++T
Sbjct: 202 SLSVDLYPQRIMCVSLHPGWVKT 224

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score =  115 bits (289), Expect = 2e-30
 Identities = 58/255 (22%), Positives = 101/255 (39%), Gaps = 28/255 (10%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATV---------HTCSRTETELNECIHHLQMK 67
              G   LVTG   GLG A     +  GA V             +  +  ++ +  ++ +
Sbjct: 6   RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR 65

Query: 68  GLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMS 127
           G K   +   V      + L+ T    F G++++ VNN G    +     + ED+ ++  
Sbjct: 66  GGKAVANYDSVE---AGEKLVKTALDTF-GRIDVVVNNAGILRDRSFSRISDEDWDIIQR 121

Query: 128 TNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLAC 186
            +   +F + + A   ++      I++ +SA GI   N G   YSA K  +  LA  L  
Sbjct: 122 VHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIY-GNFGQANYSAAKLGLLGLANTLVI 180

Query: 187 EWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP 246
           E  K+NI  N++AP    +  TE ++                   +P+ V+ LV +LC  
Sbjct: 181 EGRKNNIHCNTIAPN-AGSRMTETVMPEDLV-----------EALKPEYVAPLVLWLCHE 228

Query: 247 AASYITGQTVCIDGG 261
           +     G    +  G
Sbjct: 229 SC-EENGGLFEVGAG 242

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score =  110 bits (276), Expect = 3e-29
 Identities = 46/207 (22%), Positives = 87/207 (42%), Gaps = 27/207 (13%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGAT--VHTCSRTETELNECIHHLQ-MKGLKVTGSVCDV 78
           + +VTG  +G+GL +V++L        +   +R   +  E    L+ +K  +V      V
Sbjct: 5   SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATE----LKSIKDSRVHVLPLTV 60

Query: 79  SSRPQRQTLINTVSSLFNG-KLNIFVNNVGTSVLKPTL-EYNAEDFSLVMSTNFESAFHL 136
           +      T ++ V  +     L++ +NN G  +   T  E N    +  +  N  S   L
Sbjct: 61  TCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLL 120

Query: 137 CQLAHPLLRASGA-----------ASIVLMSSALGIVSANVG-------TVYSATKGAMN 178
            Q   PLL+ + +           A+++ +SS LG ++ N           Y  +K A+N
Sbjct: 121 TQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAIN 180

Query: 179 QLAKNLACEWAKDNIRTNSVAPWYIRT 205
              + LA +   DN+   +  P +++T
Sbjct: 181 MFGRTLAVDLKDDNVLVVNFCPGWVQT 207

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score =  105 bits (265), Expect = 1e-27
 Identities = 34/188 (18%), Positives = 74/188 (39%), Gaps = 8/188 (4%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
             ++TG + GLG  + +     G   +   R+E++L+   + L      V     D++S 
Sbjct: 3   LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL---SNNVGYRARDLASH 59

Query: 82  PQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAH 141
            + + L   +    +   +  V++ G+       E + E    ++  N  SA ++ +   
Sbjct: 60  QEVEQLFEQL----DSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELV 115

Query: 142 PLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPW 201
              +      +V++ S          + Y A K A+  L +++  E     ++  +V P 
Sbjct: 116 KRYKDQPVN-VVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPG 174

Query: 202 YIRTPFTE 209
            + T F E
Sbjct: 175 GMATEFWE 182

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score =  106 bits (266), Expect = 1e-27
 Identities = 40/192 (20%), Positives = 75/192 (39%), Gaps = 3/192 (1%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           +     L+TG + G+G  +  EL + GA +   +R +  +      ++  G      V D
Sbjct: 2   VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLD 61

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           V+ R             + G++++ VNN G   L P      +++  ++  N +      
Sbjct: 62  VTDRHSVAAFAQAAVDTW-GRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGI 120

Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNS 197
               P++ A  +  I+ + S   +       VY ATK A+  ++  L  E    NIR   
Sbjct: 121 GAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQE--STNIRVTC 178

Query: 198 VAPWYIRTPFTE 209
           V P  + +    
Sbjct: 179 VNPGVVESELAG 190

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score =  105 bits (264), Expect = 2e-27
 Identities = 55/193 (28%), Positives = 85/193 (44%), Gaps = 2/193 (1%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           +LQG  AL+TG + G+G A    L+  GA V   +R   +L      L   G KV     
Sbjct: 4   ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLEL 63

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           DV+ R      + +      G L+I VNN G  +L P  + +  D++ ++ TN     ++
Sbjct: 64  DVADRQGVDAAVASTVEAL-GGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYM 122

Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTN 196
            + A P L      ++V MSS  G V+     VY ATK  +N  ++ L  E  +  +R  
Sbjct: 123 TRAALPHLLR-SKGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGVRVV 181

Query: 197 SVAPWYIRTPFTE 209
            + P    T    
Sbjct: 182 VIEPGTTDTELRG 194

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score =  105 bits (264), Expect = 2e-27
 Identities = 40/201 (19%), Positives = 78/201 (38%), Gaps = 7/201 (3%)

Query: 9   SHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG 68
           +  +Q          ++TG + G+G A+    S  G  +   +R    L        +  
Sbjct: 5   TGGQQMGRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKA------LNL 58

Query: 69  LKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMST 128
                +  DV+ +    T I     ++ G  +  VNN G  +L       A ++  +   
Sbjct: 59  PNTLCAQVDVTDKYTFDTAITRAEKIY-GPADAIVNNAGMMLLGQIDTQEANEWQRMFDV 117

Query: 129 NFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEW 188
           N     +  Q     ++A    +I+ +SS  G  +      Y  TK A++ +++N+  E 
Sbjct: 118 NVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEV 177

Query: 189 AKDNIRTNSVAPWYIRTPFTE 209
           A  N+R  ++AP  ++T    
Sbjct: 178 AASNVRVMTIAPSAVKTELLS 198

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score =  108 bits (271), Expect = 6e-27
 Identities = 59/256 (23%), Positives = 104/256 (40%), Gaps = 28/256 (10%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATV---------HTCSRTETELNECIHHLQMK 67
              G  A+VTG   GLG       +  GA V              ++   +  +  ++  
Sbjct: 16  RYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKA 75

Query: 68  GLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMS 127
           G +       V        +I T    F G+++I VNN G    +  ++ + +D++LV  
Sbjct: 76  GGEAVADYNSVI---DGAKVIETAIKAF-GRVDILVNNAGILRDRSLVKTSEQDWNLVND 131

Query: 128 TNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLAC 186
            + + +F   Q A P ++      I++ SS  GI   N G   Y+A K  +  LA  +A 
Sbjct: 132 VHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIY-GNFGQVNYTAAKMGLIGLANTVAI 190

Query: 187 EWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP 246
           E A++N+  N + P    +  TE +L +  F              +PK ++ +VA+LC  
Sbjct: 191 EGARNNVLCNVIVPT-AASRMTEGILPDILF-----------NELKPKLIAPVVAYLCHE 238

Query: 247 AASYITGQTVCIDGGF 262
           +     G  +    G+
Sbjct: 239 SCE-DNGSYIESAAGW 253

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score =  102 bits (257), Expect = 2e-26
 Identities = 43/181 (23%), Positives = 78/181 (43%), Gaps = 5/181 (2%)

Query: 21  MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSS 80
           M  LVTG T G G  +       G  V    R +  L E    L   G  +  +  DV +
Sbjct: 1   MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL---GDNLYIAQLDVRN 57

Query: 81  RPQRQTLINTVSSLFNGKLNIFVNNVGTSV-LKPTLEYNAEDFSLVMSTNFESAFHLCQL 139
           R   + ++ ++ + +   ++I VNN G ++ ++P  + + ED+  ++ TN +   ++ + 
Sbjct: 58  RAAIEEMLASLPAEW-CNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRA 116

Query: 140 AHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVA 199
             P +       I+ + S  G      G VY ATK  + Q + NL  +     +R   + 
Sbjct: 117 VLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIE 176

Query: 200 P 200
           P
Sbjct: 177 P 177

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score =  102 bits (257), Expect = 3e-26
 Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 11/214 (5%)

Query: 4   PQQTESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHH 63
            Q   +     RW  +   ALVTG + G+G AV   L   G  V  C+RT   + E    
Sbjct: 18  FQGHMARPGMERW--RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAE 75

Query: 64  LQMKGL--KVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAED 121
            +  G    +    CD+S+     ++ + + S     ++I +NN G +     L  +   
Sbjct: 76  CKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH-SGVDICINNAGLARPDTLLSGSTSG 134

Query: 122 FSLVMSTNFESAFHLCQLAHPLLRASGAAS--IVLMSSALG--IVSANVGTVYSATKGAM 177
           +  + + N  +     + A+  ++        I+ ++S  G  ++  +V   YSATK A+
Sbjct: 135 WKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAV 194

Query: 178 NQLAKNLACEW--AKDNIRTNSVAPWYIRTPFTE 209
             L + L  E   A+ +IR   ++P  + T F  
Sbjct: 195 TALTEGLRQELREAQTHIRATCISPGVVETQFAF 228

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score =  100 bits (252), Expect = 2e-25
 Identities = 52/240 (21%), Positives = 84/240 (35%), Gaps = 49/240 (20%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEEL-SMLGATVHTCSRTETELNECIHHLQMKGLKVTGSV 75
           S     ALVTGG KG+GLA+V +L  +    V   +R  T     +  LQ +GL      
Sbjct: 1   SSGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQ 60

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
            D+      + L + +   + G L++ VNN G +              + M TNF     
Sbjct: 61  LDIDDLQSIRALRDFLRKEY-GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRD 119

Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVG---------------------------- 167
           +C    PL++  G   +V +SS + + +                                
Sbjct: 120 VCTELLPLIKPQG--RVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVED 177

Query: 168 -------------TVYSATKGAMN----QLAKNLACEWAKDNIRTNSVAPWYIRTPFTEP 210
                        + Y  TK  +       A+ L+ +   D I  N+  P ++RT    P
Sbjct: 178 TKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP 237

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score =  100 bits (252), Expect = 2e-25
 Identities = 52/203 (25%), Positives = 80/203 (39%), Gaps = 4/203 (1%)

Query: 9   SHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG 68
           S     R S    T  +TG T G G A     +  G ++    R E  L      L  K 
Sbjct: 10  SSGLVPRGSHMSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKT 69

Query: 69  LKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSV-LKPTLEYNAEDFSLVMS 127
            +V     DV  R      ++ +   F   L   +NN G ++   P    + +D+  ++ 
Sbjct: 70  -RVLPLTLDVRDRAAMSAAVDNLPEEF-ATLRGLINNAGLALGTDPAQSCDLDDWDTMVD 127

Query: 128 TNFESAFHLCQLAHPLLRASGA-ASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLAC 186
           TN +   +  +L  P L A GA ASIV + S  G        VY  TK  + Q + NL C
Sbjct: 128 TNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRC 187

Query: 187 EWAKDNIRTNSVAPWYIRTPFTE 209
           +     +R  ++ P    + F+ 
Sbjct: 188 DLQGTGVRVTNLEPGLCESEFSL 210

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score =  100 bits (251), Expect = 2e-25
 Identities = 49/207 (23%), Positives = 85/207 (41%), Gaps = 7/207 (3%)

Query: 9   SHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLG---ATVHTCSRTETELNECIHHLQ 65
           S  R+    L   T L+TG + G+G A   E          +   +R   +L E    + 
Sbjct: 22  SQGRKAAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTID 81

Query: 66  MK--GLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSV-LKPTLEYNAEDF 122
            +    KV  +  D++   + +  I  +   F   ++I VNN G ++      +   ED 
Sbjct: 82  QEFPNAKVHVAQLDITQAEKIKPFIENLPQEF-KDIDILVNNAGKALGSDRVGQIATEDI 140

Query: 123 SLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAK 182
             V  TN  +  ++ Q   P+ +A  +  IV + S  G  +   G++Y A+K A+     
Sbjct: 141 QDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTD 200

Query: 183 NLACEWAKDNIRTNSVAPWYIRTPFTE 209
           +L  E     IR   +AP  + T F+ 
Sbjct: 201 SLRKELINTKIRVILIAPGLVETEFSL 227

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 98.5 bits (246), Expect = 1e-24
 Identities = 49/189 (25%), Positives = 81/189 (42%), Gaps = 4/189 (2%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
             LVTG + G G A+ E     G TV   +R    L++ +        +      DV+  
Sbjct: 7   VWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLV---AAYPDRAEAISLDVTDG 63

Query: 82  PQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAH 141
            +   +   V + + G++++ VNN G + +    E    +   +   +      L +   
Sbjct: 64  ERIDVVAADVLARY-GRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALL 122

Query: 142 PLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPW 201
           P +R  G+ S+V +SS  G +S    + YSATK A+ QL++ LA E A   I+   V P 
Sbjct: 123 PQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPG 182

Query: 202 YIRTPFTEP 210
             RT     
Sbjct: 183 AFRTNLFGK 191

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 98.3 bits (245), Expect = 4e-24
 Identities = 39/192 (20%), Positives = 75/192 (39%), Gaps = 7/192 (3%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSR-----TETELNECIHHLQMKGLKVTGSVC 76
             L+TG + G G    E L+  G  V+   R       + +       +   + +     
Sbjct: 7   IILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLEL 66

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           DV S+      I+ +     G++++ ++N G  V  P   +  E F+ +   N  S   +
Sbjct: 67  DVQSQVSVDRAIDQIIGED-GRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRV 125

Query: 137 CQLAHPLLRASGAASIVLMSSALG-IVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRT 195
            + A P +R      ++ +SS+     +      Y A K AM+ +A   A E ++  I T
Sbjct: 126 NRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAPYFAAKAAMDAIAVQYARELSRWGIET 185

Query: 196 NSVAPWYIRTPF 207
           + + P    +  
Sbjct: 186 SIIVPGAFTSGT 197

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score = 91.5 bits (227), Expect = 7e-22
 Identities = 50/267 (18%), Positives = 88/267 (32%), Gaps = 78/267 (29%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGL-KVTGSV 75
             +   A+VTGG KG+G  + ++LS  G  V    R  T+ +E +  L+      V    
Sbjct: 9   VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQ 68

Query: 76  CDVSSRPQ-RQTLINTVSSLFNGKLNIFVNNVGTS------------------------- 109
            DV+       +L + + + F GKL+I VNN G +                         
Sbjct: 69  LDVTDPIATMSSLADFIKTHF-GKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVK 127

Query: 110 -----VLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVS- 163
                  +  +    E     +  N+     + ++  PLL+ S +  IV +SS+ G +  
Sbjct: 128 IYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKY 187

Query: 164 ------------------------------------------ANVGTVYSATKGAMNQLA 181
                                                      + G  Y+ +K  +N   
Sbjct: 188 VSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYT 247

Query: 182 KNLACEWAKDNIRTNSVAPWYIRTPFT 208
           + LA +      + N V P  ++T   
Sbjct: 248 RVLANKI--PKFQVNCVCPGLVKTEMN 272

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 89.4 bits (222), Expect = 5e-21
 Identities = 40/194 (20%), Positives = 73/194 (37%), Gaps = 9/194 (4%)

Query: 22  TALVTGGTKGLGLAVVEEL---SMLGATVHTCSR---TETELNECIHHLQMKGLKVTGSV 75
             L+TG + G+GL +   L         V+   R   T+  L E    L      +    
Sbjct: 4   VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQ 63

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
            DV            V+    G++++ V N G  +L P      +  + V+  N      
Sbjct: 64  LDVRDSKSVAAARERVT---EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVR 120

Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRT 195
           + Q   P ++  G+  +++  S  G++      VY A+K A+  L ++LA       +  
Sbjct: 121 MLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHL 180

Query: 196 NSVAPWYIRTPFTE 209
           + +    + T F E
Sbjct: 181 SLIECGPVHTAFME 194

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* Length = 261

 Score = 72.2 bits (178), Expect = 4e-15
 Identities = 52/199 (26%), Positives = 85/199 (42%), Gaps = 15/199 (7%)

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVG---TSVLK-PTLEYNAEDFSLVMSTNFE 131
            DV+   +   L   V   F G L+  V+ +       ++   ++   +D+ L +  +  
Sbjct: 65  ADVTQDEELDALFAGVKEAF-GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAY 123

Query: 132 SAFHLCQLAHPLLRASGAASIVLMS---SALGIVSANV-GTVYSATKGAMNQLAKNLACE 187
           S   + + A PLLR  G   IV ++   S   +   NV        K A+    + LA E
Sbjct: 124 SLVAVARRAEPLLREGG--GIVTLTYYASEKVVPKYNVMAIA----KAALEASVRYLAYE 177

Query: 188 WAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA 247
                +R N+++   +RT     + G  K  D V    P+ R    +EV +L  FL  P 
Sbjct: 178 LGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPL 237

Query: 248 ASYITGQTVCIDGGFTVNG 266
           AS ITG+ V +D G+ + G
Sbjct: 238 ASGITGEVVYVDAGYHIMG 256

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} Length = 285

 Score = 71.9 bits (177), Expect = 6e-15
 Identities = 47/199 (23%), Positives = 83/199 (41%), Gaps = 14/199 (7%)

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVG---TSVLK-PTLEYNAEDFSLVMSTNFE 131
           CDVS     + L   +   + G L+I V+++        K   ++ + E F + M  +  
Sbjct: 78  CDVSLDEDIKNLKKFLEENW-GSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVY 136

Query: 132 SAFHLCQLAHPLLRASGAASIVLMS---SALGIVSANV-GTVYSATKGAMNQLAKNLACE 187
           S   L +   PL+      +IV +S   +   +   NV G      K A+    + LA +
Sbjct: 137 SLIALTRELLPLMEGRNG-AIVTLSYYGAEKVVPHYNVMGIA----KAALESTVRYLAYD 191

Query: 188 WAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA 247
            AK   R N+++   ++T     + G    ++      P G+    ++V     FLC   
Sbjct: 192 IAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPFGKPITIEDVGDTAVFLCSDW 251

Query: 248 ASYITGQTVCIDGGFTVNG 266
           A  ITG+ V +D G+ + G
Sbjct: 252 ARAITGEVVHVDNGYHIMG 270

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Length = 266

 Score = 71.4 bits (176), Expect = 6e-15
 Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 17/200 (8%)

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVG---TSVLK-PTLEYNAEDFSLVMSTNFE 131
           CDV++  + +T   ++     G ++   + +       L    L  N + F L  + +  
Sbjct: 66  CDVTNDAEIETCFASIKEQV-GVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSY 124

Query: 132 SAFHLCQLAHPLLRASGAASIVLMSSALGIVSA----NV-GTVYSATKGAMNQLAKNLAC 186
           S   + + A P++   G  SIV ++  LG        NV G      K +++   K LA 
Sbjct: 125 SLTAVVKAARPMMTEGG--SIVTLTY-LGGELVMPNYNVMGVA----KASLDASVKYLAA 177

Query: 187 EWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP 246
           +  K+NIR NS++   IRT   + +      + +++ R P+ R   P+EV    AFL   
Sbjct: 178 DLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPLRRTTTPEEVGDTAAFLFSD 237

Query: 247 AASYITGQTVCIDGGFTVNG 266
            +  ITG+ + +D GF +  
Sbjct: 238 MSRGITGENLHVDSGFHITA 257

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 2jjy_A* Length = 280

 Score = 71.1 bits (175), Expect = 1e-14
 Identities = 43/203 (21%), Positives = 84/203 (41%), Gaps = 21/203 (10%)

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTS--------VLKPTLEYNAEDFSLVMS 127
           CDV S  + + L   +  ++   L+  V+++  +         +        E FS+   
Sbjct: 82  CDVISDQEIKDLFVELGKVW-DGLDAIVHSIAFAPRDQLEGNFIDCV---TREGFSIAHD 137

Query: 128 TNFESAFHLCQLAHPLLRASGAASIVLMS---SALGIVSANV-GTVYSATKGAMNQLAKN 183
            +  S   L +    +++   A S+V ++   +   + S N  G      K ++    + 
Sbjct: 138 ISAYSFAALAKEGRSMMKNRNA-SMVALTYIGAEKAMPSYNTMGVA----KASLEATVRY 192

Query: 184 LACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFL 243
            A    +D I+ N+V+   I+T     +    K +D     +P+ +  +  EV + VAFL
Sbjct: 193 TALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTVAFL 252

Query: 244 CMPAASYITGQTVCIDGGFTVNG 266
           C   A+ ITG+ V +D G+    
Sbjct: 253 CSDMATGITGEVVHVDAGYHCVS 275

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* Length = 275

 Score = 70.7 bits (174), Expect = 1e-14
 Identities = 47/199 (23%), Positives = 83/199 (41%), Gaps = 15/199 (7%)

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVG---TSVLK-PTLEYNAEDFSLVMSTNFE 131
            DVS     ++L N+V     G L+  V++V       L+   LE +   F+  M  +  
Sbjct: 63  LDVSKEEHFKSLYNSVKKDL-GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVY 121

Query: 132 SAFHLCQLAHPLLRASGAASIVLMS---SALGIVSANV-GTVYSATKGAMNQLAKNLACE 187
           S   L     PLL      S++ +S   S   +   NV G      K A+    + LA +
Sbjct: 122 SLIELTNTLKPLLNNGA--SVLTLSYLGSTKYMAHYNVMGLA----KAALESAVRYLAVD 175

Query: 188 WAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA 247
             K +IR N+++   IRT  +  +      +   +   P+ +    +EV +   +L    
Sbjct: 176 LGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSL 235

Query: 248 ASYITGQTVCIDGGFTVNG 266
           +S ++G+   +D G+ V G
Sbjct: 236 SSGVSGEVHFVDAGYHVMG 254

>4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH]; oxidoreductase, short-chain dehydrogenase/reductase superfam fatty acid biosynthesis; HET: NAP E9P GLU; 1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A* 4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A* Length = 282

 Score = 70.7 bits (174), Expect = 2e-14
 Identities = 49/196 (25%), Positives = 81/196 (41%), Gaps = 17/196 (8%)

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVG---TSVLK-PTLEYNAEDFSLVMSTNFE 131
            DV S  +       +     G ++   +++       L+    E + E F L    +  
Sbjct: 91  IDVQSDEEVINGFEQIGKDV-GNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSY 149

Query: 132 SAFHLCQLAHPLLRASGAASIVLMSSALGIVSA----NV-GTVYSATKGAMNQLAKNLAC 186
           S   +   A  L+   G  SIV  +  LG   A    NV G      K ++    K LA 
Sbjct: 150 SLTIVAHEAKKLMPEGG--SIVATTY-LGGEFAVQNYNVMGVA----KASLEANVKYLAL 202

Query: 187 EWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP 246
           +   DNIR N+++   IRT   + + G    + E++ R P+ R  +  EV    A+L   
Sbjct: 203 DLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIEERAPLKRNVDQVEVGKTAAYLLSD 262

Query: 247 AASYITGQTVCIDGGF 262
            +S +TG+ + +D GF
Sbjct: 263 LSSGVTGENIHVDSGF 278

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* Length = 265

 Score = 70.3 bits (173), Expect = 2e-14
 Identities = 43/202 (21%), Positives = 87/202 (43%), Gaps = 20/202 (9%)

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLE------YNAEDFSLVMSTN 129
           CDV+      T+   +  ++  K + FV+++G +     L+         E F +    +
Sbjct: 66  CDVAEDASIDTMFAELGKVW-PKFDGFVHSIGFAP-GDQLDGDYVNAVTREGFKIAHDIS 123

Query: 130 FESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA----NV-GTVYSATKGAMNQLAKNL 184
             S   + +    +L      +++ +S  LG   A    NV G      K ++    + +
Sbjct: 124 SYSFVAMAKACRSMLNPGS--ALLTLSY-LGAERAIPNYNVMGLA----KASLEANVRYM 176

Query: 185 ACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLC 244
           A     + +R N+++   IRT     +    K +   ++ TP+ R    ++V +  AFLC
Sbjct: 177 ANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLC 236

Query: 245 MPAASYITGQTVCIDGGFTVNG 266
              ++ I+G+ V +DGGF++  
Sbjct: 237 SDLSAGISGEVVHVDGGFSIAA 258

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Length = 293

 Score = 70.0 bits (172), Expect = 3e-14
 Identities = 43/200 (21%), Positives = 78/200 (39%), Gaps = 17/200 (8%)

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVG---TSVLK-PTLEYNAEDFSLVMSTNFE 131
           CDV+       +  T+   + GKL+  V+ +G      L    ++ +  +F+  M  +  
Sbjct: 88  CDVADAASIDAVFETLEKKW-GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVY 146

Query: 132 SAFHLCQLAHPLLRASGAASIVLMSSALGIVSA----NV-GTVYSATKGAMNQLAKNLAC 186
           S   + + A  L+   G  SI+ ++   G        NV G      K A+    K LA 
Sbjct: 147 SLTAVSRRAEKLMADGG--SILTLTY-YGAEKVMPNYNVMGVA----KAALEASVKYLAV 199

Query: 187 EWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP 246
           +    NIR N+++   I+T     +      +   +   P+ R     EV  +  +    
Sbjct: 200 DLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIDEVGDVGLYFLSD 259

Query: 247 AASYITGQTVCIDGGFTVNG 266
            +  +TG+    D G+ V G
Sbjct: 260 LSRSVTGEVHHADSGYHVIG 279

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* Length = 296

 Score = 70.0 bits (172), Expect = 3e-14
 Identities = 48/200 (24%), Positives = 81/200 (40%), Gaps = 17/200 (8%)

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVG---TSVLK-PTLEYNAEDFSLVMSTNFE 131
           CDVS       +   ++  + G L+  V+ V     + LK   ++ +  +F   M  +  
Sbjct: 87  CDVSDAESVDNMFKVLAEEW-GSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCY 145

Query: 132 SAFHLCQLAHPLLRASGAASIVLMSSALGIVSA----NV-GTVYSATKGAMNQLAKNLAC 186
           S  ++   A PL+   G  SI+ +S   G        NV G      K A+    K LA 
Sbjct: 146 SFTYIASKAEPLMTNGG--SILTLSY-YGAEKVVPHYNVMGVC----KAALEASVKYLAV 198

Query: 187 EWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP 246
           +  K  IR N+++   +RT  +  +      +   K  +P+ R     +V     +L   
Sbjct: 199 DLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPLRRNTTLDDVGGAALYLLSD 258

Query: 247 AASYITGQTVCIDGGFTVNG 266
                TG+TV +D G+ V G
Sbjct: 259 LGRGTTGETVHVDCGYHVVG 278

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} Length = 271

 Score = 69.2 bits (170), Expect = 4e-14
 Identities = 46/203 (22%), Positives = 85/203 (41%), Gaps = 22/203 (10%)

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTS--------VLKPTLEYNAEDFSLVMS 127
           CDV+   Q   L  ++ + +   L+  V+++G +         L        E+F +   
Sbjct: 71  CDVADDAQIDALFASLKTHW-DSLDGLVHSIGFAPREAIAGDFLDGL---TRENFRIAHD 126

Query: 128 TNFESAFHLCQLAHPLLRASGAASIVLMS---SALGIVSANV-GTVYSATKGAMNQLAKN 183
            +  S   L + A P+L      S++ +S   +   I + N  G      K A+    + 
Sbjct: 127 ISAYSFPALAKAALPMLSDDA--SLLTLSYLGAERAIPNYNTMGLA----KAALEASVRY 180

Query: 184 LACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFL 243
           LA       +R N+++   I+T     +   GK +D V+S +P+ R    ++V +  AFL
Sbjct: 181 LAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTIEQVGNAGAFL 240

Query: 244 CMPAASYITGQTVCIDGGFTVNG 266
               AS +T + + +D GF    
Sbjct: 241 LSDLASGVTAEVMHVDSGFNAVV 263

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* Length = 315

 Score = 69.8 bits (171), Expect = 5e-14
 Identities = 44/209 (21%), Positives = 80/209 (38%), Gaps = 21/209 (10%)

Query: 76  CDVSSRPQRQTLIN-TVSSLFN------GKLNIFVNNVG--TSVLKPTLEYNAEDFSLVM 126
            D+    +   +   T+  +        G ++I V+++     V KP LE + + +    
Sbjct: 91  QDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAAS 150

Query: 127 STNFESAFHLCQLAHPLLRASGAASIVLMSSALGI--VSANVGTVYSATKGAMNQLAKNL 184
           S +  S   L Q   P++   G  S V +S  L    V    G   S+ K A+    + L
Sbjct: 151 SNSAYSFVSLLQHFGPIMNEGG--SAVTLSY-LAAERVVPGYGGGMSSAKAALESDTRTL 207

Query: 185 ACEW-AKDNIRTNSVAPWYIRT------PFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVS 237
           A E   K  +R N+++   +++        +         +D   +  P+ R     +V 
Sbjct: 208 AWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEKSFIDYAIDYSYNNAPLRRDLHSDDVG 267

Query: 238 SLVAFLCMPAASYITGQTVCIDGGFTVNG 266
               FL  P A  ++G T+ +D G    G
Sbjct: 268 GAALFLLSPLARAVSGVTLYVDNGLHAMG 296

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* Length = 297

 Score = 69.0 bits (169), Expect = 9e-14
 Identities = 43/205 (20%), Positives = 80/205 (39%), Gaps = 19/205 (9%)

Query: 76  CDVSSRPQ-RQTLINTVSSLFN------GKLNIFVNNVG--TSVLKPTLEYNAEDFSLVM 126
            DV +  +   +   TV           G ++I V+++     V KP LE + + +   +
Sbjct: 90  EDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAI 149

Query: 127 STNFESAFHLCQLAHPLLRASGAASIVLMS---SALGIVSANV--GTVYSATKGAMNQLA 181
           S +  S   L     P++   G  + + ++   S   I        +  +A +     LA
Sbjct: 150 SASSYSFVSLLSHFLPIMNPGG--ASISLTYIASERIIPGYGGGMSSAKAALESDTRVLA 207

Query: 182 KNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVA 241
                   K NIR N+++   + +   + +      ++   +  P+ +     EV +  A
Sbjct: 208 FEAG---RKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAA 264

Query: 242 FLCMPAASYITGQTVCIDGGFTVNG 266
           FL  P AS ITG T+ +D G    G
Sbjct: 265 FLVSPLASAITGATIYVDNGLNSMG 289

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} Length = 319

 Score = 68.7 bits (168), Expect = 1e-13
 Identities = 42/211 (19%), Positives = 82/211 (38%), Gaps = 25/211 (11%)

Query: 76  CDVSSRPQRQTLIN-TVSSLFN------GKLNIFVNNVG--TSVLKPTLEYNAEDFSLVM 126
            +VSS  +   +   T+S +        G+++I V+++     V KP L+ + + +   +
Sbjct: 104 PEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAV 163

Query: 127 STNFESAFHLCQLAHPLLRASGAASIVLMS---SALGIVSANV--GTVYSATKGAMNQLA 181
           S++  S   L Q   PL++  G  S + +S   S   I        +  +A +     LA
Sbjct: 164 SSSSYSFVSLLQHFLPLMKEGG--SALALSYIASEKVIPGYGGGMSSAKAALESDCRTLA 221

Query: 182 KNLACEWAKDNIRTNSVAPWYIRT------PFTEPLLGNGKFVDEVKSRTPMGRLGEPKE 235
                      +R N ++   +++                  +D  ++  P+ +  E  +
Sbjct: 222 FEAG---RARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDD 278

Query: 236 VSSLVAFLCMPAASYITGQTVCIDGGFTVNG 266
           V     FL  P A  +TG T+ +D G    G
Sbjct: 279 VGRAALFLLSPLARAVTGATLYVDNGLHAMG 309

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... Length = 269

 Score = 63.0 bits (154), Expect = 7e-12
 Identities = 45/225 (20%), Positives = 75/225 (33%), Gaps = 53/225 (23%)

Query: 76  CDVSSRPQRQTLINTVSSLF--NGKLNIFVNNVG---TSVLK--PTLEYNAEDFSLVMST 128
            DV +     +L   V+       KL+  V+++G    + +   P  +    D S  +  
Sbjct: 63  LDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHI 122

Query: 129 NFESAF---HLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQ-----L 180
              SA+    + +   P++   G  SIV M              +  ++ AM       +
Sbjct: 123 ---SAYSYASMAKALLPIMNPGG--SIVGMD-------------FDPSR-AMPAYNWMTV 163

Query: 181 AKN--------LACEWAKDNIRTNSVAPWYIRT----------PFTEPLLGNGKFVDEVK 222
           AK+        +A E  K  +R+N VA   IRT             E         +   
Sbjct: 164 AKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWD 223

Query: 223 SRTPMGR-LGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNG 266
            R P+G  + +   V+  V  L        TG  +  DGG     
Sbjct: 224 QRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHTQL 268

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 56.8 bits (137), Expect = 1e-09
 Identities = 28/168 (16%), Positives = 52/168 (30%), Gaps = 21/168 (12%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           S++G  A+V  GT  +G+     L+  GA V  C R   +       +  +  KV  +  
Sbjct: 116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF-KVNVTAA 174

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           + +    R   +     +F          +G  +L      N     +V   N       
Sbjct: 175 ETADDASRAEAVKGAHFVFT------AGAIGLELLPQAAWQNESSIEIVADYN------- 221

Query: 137 CQLAHPLLRASGAASI---VLMSSALGIVSANVGTV-YSATKGAMNQL 180
              A P L   G  +              +  +G +     +  + +L
Sbjct: 222 ---AQPPLGIGGIDATDKGKEYGGKRAFGALGIGGLKLKLHRACIAKL 266

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 53.7 bits (129), Expect = 2e-08
 Identities = 32/166 (19%), Positives = 56/166 (33%), Gaps = 12/166 (7%)

Query: 22   TALVTGGTKGLGLAVVEELSMLGATVHTC-SRT---ETELNECIHHLQMKGLKVTGSVCD 77
            + ++TGG  G GL + + L + GA      SR+          +   + +G++V  S  +
Sbjct: 1886 SYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSN 1945

Query: 78   VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
             SS    ++LI   + L  G +    N               E F  V    +    +L 
Sbjct: 1946 ASSLDGARSLITEATQL--GPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANL- 2002

Query: 138  QLAHPLLRASGA--ASIVLMSSALGIVSANVGTVYSATKGAMNQLA 181
                 + R +       V+ SS            Y     AM ++ 
Sbjct: 2003 ---DRVTREACPELDYFVIFSSVSCGRGNAGQANYGFANSAMERIC 2045

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 51.1 bits (123), Expect = 9e-08
 Identities = 41/206 (19%), Positives = 68/206 (33%), Gaps = 33/206 (16%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           S    T ++TG   GLG     EL+  GATV    R   +       +     +V     
Sbjct: 13  SFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM---AGQVEVREL 69

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           D+       + +   +   +   ++ +NN G  ++        + F   + TN    F L
Sbjct: 70  DLQD----LSSVRRFADGVS-GADVLINNAG--IMAVPYALTVDGFESQIGTNHLGHFAL 122

Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSA-------------NVGTVYSATKGAM----NQ 179
             L  P L       +V +SS                    +    YS +K A     ++
Sbjct: 123 TNLLLPRLT----DRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKLANLLFTSE 178

Query: 180 LAKNLACEWAKDNIRTNSVAPWYIRT 205
           L + L    A   +R  +  P Y  T
Sbjct: 179 LQRRL--TAAGSPLRALAAHPGYSHT 202

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... Length = 329

 Score = 51.1 bits (122), Expect = 1e-07
 Identities = 33/243 (13%), Positives = 82/243 (33%), Gaps = 58/243 (23%)

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTS--VLKPTLEYNAEDFSLVMSTNFESA 133
            ++      + + N +   + GK+N+ V+++  +  V K  L  + + +   +S +  S 
Sbjct: 92  YNMLQNYTIEDVANLIHQKY-GKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSL 150

Query: 134 FHLCQLAHPLLRASGAASIVLMSSALGIVSA-----NV-GTVYSATKGAMNQLAKNLACE 187
             LC+    +++     SI+ ++                 +  +A +     LA +L   
Sbjct: 151 ISLCKYFVNIMKPQS--SIISLTY-HASQKVVPGYGGGMSSAKAALESDTRVLAYHLG-- 205

Query: 188 WAKDNIRTNSVAPWYIRT------------------------------------------ 205
               NIR N+++   +++                                          
Sbjct: 206 -RNYNIRINTISAGPLKSRAATAINKLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKK 264

Query: 206 -PFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTV 264
              ++        ++  +   P+ +     ++ S+ +FL    +  ITGQT+ +D G  +
Sbjct: 265 ISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITGQTIYVDNGLNI 324

Query: 265 NGF 267
              
Sbjct: 325 MFL 327

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} Length = 422

 Score = 49.0 bits (116), Expect = 6e-07
 Identities = 45/309 (14%), Positives = 86/309 (27%), Gaps = 56/309 (18%)

Query: 5   QQTESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTC----------SRTE 54
           +Q  +   +   +      LV G + G GLA     +  G    T           S+  
Sbjct: 46  EQIAATRARGVRNDGPKKVLVIGASSGYGLASRITAA-FGFGADTLGVFFEKPGTASKAG 104

Query: 55  TELNECIHHLQ----MKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGT-- 108
           T                GL       D  S   R  +I  + +   G++++ V ++ +  
Sbjct: 105 TAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARAQVIELIKTEMGGQVDLVVYSLASPV 164

Query: 109 -----------SVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHP----LLRASGAASIV 153
                      S LKP  +      ++  + +      +   +       +   G     
Sbjct: 165 RKLPGSGEVKRSALKPIGQ-TYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGGQDWE 223

Query: 154 LMSSAL---GIVSANVGTV-------------Y-----SATKGAMNQLAKNLACEWAKDN 192
           L   AL   G+++    +V             Y        K  +++ A+ L    AK  
Sbjct: 224 LWIDALEGAGVLADGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHG 283

Query: 193 IRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT 252
              N      + T  +  +     ++  V     M   G  +     +  L         
Sbjct: 284 GGANVAVLKSVVTQASAAIPVMPLYISMV--YKIMKEKGLHEGTIEQLDRLFRERLYRQD 341

Query: 253 GQTVCIDGG 261
           GQ   +D  
Sbjct: 342 GQPAEVDEQ 350

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 47.1 bits (112), Expect = 1e-06
 Identities = 34/172 (19%), Positives = 61/172 (35%), Gaps = 31/172 (18%)

Query: 19  QGMTALVTGGTKGL-GLAVVEELSMLGA--TVHTCSRTETELNECIHHLQMKGLKVTGSV 75
           Q  +  + G + G  G  +++E+   G    V    R +   +E  +        V   V
Sbjct: 17  QNKSVFILGAS-GETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYK------NVNQEV 69

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
            D          ++  +S F G  ++    +GT+  K      AE F  V   + +    
Sbjct: 70  VDFEK-------LDDYASAFQGH-DVGFCCLGTTRGKA----GAEGFVRV---DRDYVLK 114

Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACE 187
             +LA    +A G     L+SS  G    +   +Y   KG +    + L  +
Sbjct: 115 SAELA----KAGGCKHFNLLSS-KGA-DKSSNFLYLQVKGEVEAKVEELKFD 160

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} Length = 525

 Score = 47.1 bits (112), Expect = 3e-06
 Identities = 33/164 (20%), Positives = 55/164 (33%), Gaps = 19/164 (11%)

Query: 15  RWSLQGMTALVTGGTKGLGLAVVEELSMLGA---------------TVHTCSRTETELNE 59
            W   G T LVTG  +         L+  GA                  + +  ++ L  
Sbjct: 247 WWQADG-TVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAG 305

Query: 60  CIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNA 119
            +  L   G   T   CD++       L+  VS      L+  ++   T   +P    +A
Sbjct: 306 LVAELADLGATATVVTCDLTDAEAAARLLAGVSD--AHPLSAVLHLPPTVDSEPLAATDA 363

Query: 120 EDFSLVMSTNFESAFHLCQL-AHPLLRASGAASIVLMSSALGIV 162
           +  + V++    +A HL +L             +VL SS   I 
Sbjct: 364 DALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIW 407

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* Length = 486

 Score = 45.5 bits (108), Expect = 1e-05
 Identities = 37/153 (24%), Positives = 56/153 (36%), Gaps = 13/153 (8%)

Query: 15  RWSLQGMTALVTGGTKGLGLAVVEELSMLGAT--VHTCSRTETE---LNECIHHLQMKGL 69
            W   G T LVTGGT G+G  +   L+  GA   +   SR+  +     E +  L+  G 
Sbjct: 222 EWKPTG-TVLVTGGTGGVGGQIARWLARRGAPHLLLV-SRSGPDADGAGELVAELEALGA 279

Query: 70  KVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTN 129
           + T + CDV+ R   + L+  +    +  L+   +   T           E         
Sbjct: 280 RTTVAACDVTDRESVRELLGGIGD--DVPLSAVFHAAATLDDGTVDTLTGERIERASRAK 337

Query: 130 FESAFHLCQLAHPLLRASGAASIVLMSSALGIV 162
              A +L    H L R     + VL SS     
Sbjct: 338 VLGARNL----HELTRELDLTAFVLFSSFASAF 366

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* Length = 496

 Score = 45.5 bits (108), Expect = 1e-05
 Identities = 38/153 (24%), Positives = 60/153 (39%), Gaps = 12/153 (7%)

Query: 15  RWSLQGMTALVTGGTKGLGLAVVEELSMLGAT-VHTCSRTETE---LNECIHHLQMKGLK 70
           R  + G + LVTGGT G+G  V   L+  GA  +   SR   +     E    L+  G++
Sbjct: 235 RPPVHG-SVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVR 293

Query: 71  VTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSV-LKPTLEYNAEDFSLVMSTN 129
           VT + CD + R     L+  +    +  L    ++ G +    P  +        +M   
Sbjct: 294 VTIAACDAADREALAALLAELPE--DAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAK 351

Query: 130 FESAFHLCQLAHPLLRASGAASIVLMSSALGIV 162
             +A HL    H L       + VL SS   + 
Sbjct: 352 LTAARHL----HELTADLDLDAFVLFSSGAAVW 380

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score = 42.7 bits (101), Expect = 3e-05
 Identities = 28/169 (16%), Positives = 58/169 (34%), Gaps = 36/169 (21%)

Query: 20  GMTALVTGGTKGL-GLAVVEELSMLGA--TVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
               L+ G T GL G  +++ +        V   +R     +           ++   V 
Sbjct: 5   PKRVLLAGAT-GLTGEHLLDRILSEPTLAKVIAPARKALAEHP----------RLDNPVG 53

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
            ++           +    +G ++     +GT++ +     + E F  V   +F+    +
Sbjct: 54  PLAE----------LLPQLDGSIDTAFCCLGTTIKEAG---SEEAFRAV---DFDLPLAV 97

Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLA 185
            + A       GA   +++ SALG   A     Y+  KG + Q  +   
Sbjct: 98  GKRA----LEMGARHYLVV-SALGA-DAKSSIFYNRVKGELEQALQEQG 140

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 42.4 bits (100), Expect = 9e-05
 Identities = 39/173 (22%), Positives = 64/173 (36%), Gaps = 29/173 (16%)

Query: 22  TALVTGGTKGLGLAVVEEL-SMLGA-TVHTCSR---TETELNECIHHLQMKGLKVTGSVC 76
           T LVTGGT  LG  V   L    G   +   SR     +   E +  L   G +V+   C
Sbjct: 532 TVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQAC 591

Query: 77  DVSSRPQRQTLINTVSSL------FNGKLNIFVNNVGTSVLKPTLEYN--AEDFSLVMST 128
           DV+ R     ++ ++          +             VL   +  +   E    V+  
Sbjct: 592 DVADRETLAKVLASIPDEHPLTAVVH----------AAGVLDDGVSESLTVERLDQVLRP 641

Query: 129 NFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLA 181
             + A +L +L  P        ++VL SS  G++ +     Y+A    ++ LA
Sbjct: 642 KVDGARNLLELIDPD------VALVLFSSVSGVLGSGGQGNYAAANSFLDALA 688

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688

 Score = 40.6 bits (95), Expect = 4e-04
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 2/42 (4%)

Query: 17  SLQGMTALVTGGTKG-LGLAVVEELSMLGATV-HTCSRTETE 56
           + +    L+TG  KG +G  V++ L   GA V  T SR   +
Sbjct: 473 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQ 514

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} Length = 511

 Score = 39.8 bits (93), Expect = 6e-04
 Identities = 39/155 (25%), Positives = 50/155 (32%), Gaps = 20/155 (12%)

Query: 15  RWSLQGMTALVTGGTKGLGLAVVEELSMLGAT--VHTCSRT---ETELNECIHHLQMKGL 69
            W   G   L+TGG   +G  +   L+  GA   V T SR         E    L+  G 
Sbjct: 255 SWQPSGT-VLITGGMGAIGRRLARRLAAEGAERLVLT-SRRGPEAPGAAELAEELRGHGC 312

Query: 70  KVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTN 129
           +V  + CDV+ R     L+           N   +  G          + E F  V    
Sbjct: 313 EVVHAACDVAERDALAALVTAYP------PNAVFHTAGILDDAVIDTLSPESFETVRGAK 366

Query: 130 FESAFHLCQLA--HPLLRASGAASIVLMSSALGIV 162
              A  L QL      L A      VL SS  G  
Sbjct: 367 VCGAELLHQLTADIKGLDA-----FVLFSSVTGTW 396

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	270
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	100.0
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	100.0
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	100.0
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	100.0
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	100.0
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	100.0
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	100.0
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.97
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.97
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.97
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.96
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.96
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.96
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.95
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.94
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.94
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.94
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.94
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.94
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.94
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.94
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.93
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.93
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.93
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.93
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.93
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.93
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.93
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.93
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.92
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.92
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.92
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.92
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.92
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.92
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.92
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.91
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.91
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.91
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.91
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.91
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.91
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.91
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.91
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.91
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.91
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.91
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.91
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.91
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.91
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.9
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.9
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.9
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.89
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.89
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.89
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.89
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.89
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.89
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.89
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.89
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.88
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.88
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.88
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.88
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.88
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.88
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.87
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.87
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.87
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.87
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.86
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.86
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.86
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.86
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.86
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.85
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.85
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.85
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.84
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.84
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.84
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.84
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.84
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.83
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.83
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.83
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.83
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.81
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.79
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.78
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.78
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.77
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.76
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.74
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.73
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.71
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.71
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.71
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.68
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.67
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.65
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.52
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.39
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.2
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.07
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.98
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.93
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.82
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.74
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.69
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.67
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.66
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.64
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.59
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.57
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.54
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.53
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.46
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.42
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.4
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.4
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.38
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.37
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.35
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.35
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.33
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.32
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.3
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.28
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.28
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.28
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	98.27
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.25
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.22
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	98.15
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.12
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	98.1
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.1
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	98.08
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.07
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.07
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.07
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.06
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	98.03
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	98.03
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	98.03
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	98.02
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	98.01
4eye_A	342	Probable oxidoreductase; structural genomics, niai	98.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	98.0
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.97
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.97
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.96
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.94
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.91
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.86
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.85
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.81
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.79
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.77
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.76
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.72
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.71
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.69
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.69
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.68
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.68
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.68
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.67
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.67
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.55
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.53
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	97.52
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.51
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.49
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.49
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.48
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.47
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.47
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.45
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.43
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.43
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.4
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.38
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	97.33
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.3
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	97.27
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	97.24
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	97.23
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.23
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.2
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.19
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	97.19
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.18
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.17
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.15
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.15
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	97.13
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	97.11
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	97.1
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	97.09
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.09
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.09
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.08
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.05
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.04
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	97.03
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	97.02
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.02
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	97.01
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	96.98
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	96.98
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.97
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.97
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	96.97
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	96.96
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	96.96
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.96
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.96
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.96
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.93
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.91
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	96.9
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.89
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.88
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	96.86
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	96.86
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	96.82
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.82
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.8
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	96.78
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	96.76
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	96.75
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.73
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	96.72
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	96.72
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.72
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	96.72
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	96.72
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.71
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.7
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	96.7
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.69
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.66
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	96.66
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	96.66
3k96_A	356	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA	96.66
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.66
3qha_A	296	Putative oxidoreductase; seattle structural genomi	96.63
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	96.59
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	96.54
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.53
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	96.5
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.49
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.48
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.47
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.45
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	96.44
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.43
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	96.43
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	96.41
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	96.4
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	96.4
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	96.4
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	96.39
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	96.39
3l07_A	285	Bifunctional protein fold; structural genomics, ID	96.38
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	96.36
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	96.33
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	96.33
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	96.32
1u8x_X	472	Maltose-6'-phosphate glucosidase; structural genom	96.32
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	96.31
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.29
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	96.25
3mog_A	483	Probable 3-hydroxybutyryl-COA dehydrogenase; struc	96.22
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	96.21
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	96.21
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	96.2
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	96.18
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	96.14
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	96.09
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	96.09
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	96.08
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	96.07
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	96.07
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	96.06

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=3.2e-61  Score=404.58  Aligned_cols=248  Identities=25%  Similarity=0.424  Sum_probs=232.0

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      ++|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.++++..+.++.++.+|++|+++++++++++.++|
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   82 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY   82 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccEEEECCCCCC-CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           96 NGKLNIFVNNVGTSV-LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        96 ~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                       +++|+||||||+.. ..++.+.++|+|++++++|+.++|.++|+++|+|++++.|+|||+||..+..+.++...|++||
T Consensus        83 -G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~~~Y~asK  161 (254)
T 4fn4_A           83 -SRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAK  161 (254)
T ss_dssp             -SCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSCHHHHHHH
T ss_pred             -CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCChHHHHHH
Confidence             89999999999864 5789999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhh-HH-HHhhcCCCCCCCChHhHHHHHHHHhCCCCCCcc
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKF-VD-EVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT  252 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  252 (270)
                      +|+.+|+|++|.|++++|||||+|+||+++|+|.......... .+ ......|.+|+++|+|+|++++||+|++++|+|
T Consensus       162 aal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R~g~pediA~~v~fLaSd~a~~iT  241 (254)
T 4fn4_A          162 HGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASDEASFVN  241 (254)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCCCCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhcCCc
Confidence            9999999999999999999999999999999998766544332 22 234457889999999999999999999999999


Q ss_pred             CcEEeecCCccc
Q 024230          253 GQTVCIDGGFTV  264 (270)
Q Consensus       253 G~~i~vdgG~~~  264 (270)
                      ||+|.||||+++
T Consensus       242 G~~i~VDGG~t~  253 (254)
T 4fn4_A          242 GDAVVVDGGLTV  253 (254)
T ss_dssp             SCEEEESTTGGG
T ss_pred             CCEEEeCCCccc
Confidence            999999999986

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=7.5e-62  Score=408.59  Aligned_cols=250  Identities=33%  Similarity=0.488  Sum_probs=239.3

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      .+++|+||++|||||++|||+++|+.|+++|++|++++|+++.+++..+++.+.+.++.++.+|++|+++++++++++.+
T Consensus         3 ~~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (255)
T 4g81_D            3 ALFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDA   82 (255)
T ss_dssp             CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence            35799999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEecCccccccCCCChhhhh
Q 024230           94 LFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRAS-GAASIVLMSSALGIVSANVGTVYSA  172 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~ii~iss~~~~~~~~~~~~y~~  172 (270)
                      ++ +++|+||||||.....++.+.++|+|++++++|+.|+|.++|+++|+|.++ +.|+|||+||..+..+.++...|++
T Consensus        83 ~~-G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y~a  161 (255)
T 4g81_D           83 EG-IHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTA  161 (255)
T ss_dssp             TT-CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHHHH
T ss_pred             HC-CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhHHH
Confidence            99 899999999999999999999999999999999999999999999999754 5799999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCcc
Q 024230          173 TKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT  252 (270)
Q Consensus       173 sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  252 (270)
                      ||+|+.+|+|++|.|++++|||||+|+||+++|+|......++...+.+....|++|+++|+|+|++++||+|+.++|+|
T Consensus       162 sKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S~~a~~iT  241 (255)
T 4g81_D          162 AKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLSSKASDYIN  241 (255)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhCCCc
Confidence            99999999999999999999999999999999999988777777778888899999999999999999999999999999


Q ss_pred             CcEEeecCCccc
Q 024230          253 GQTVCIDGGFTV  264 (270)
Q Consensus       253 G~~i~vdgG~~~  264 (270)
                      ||+|.|||||+.
T Consensus       242 G~~i~VDGG~~A  253 (255)
T 4g81_D          242 GQIIYVDGGWLA  253 (255)
T ss_dssp             SCEEEESTTGGG
T ss_pred             CCEEEECCCeEe
Confidence            999999999864

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=4.3e-60  Score=394.56  Aligned_cols=243  Identities=30%  Similarity=0.451  Sum_probs=226.4

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      +.++|+||++|||||++|||+++|+.|+++|++|++++|+.+  ++..+++.+.+.++.++.+|++|+++++++++    
T Consensus         3 n~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~----   76 (247)
T 4hp8_A            3 NPFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDGGNASALLIDFADPLAAKDSFT----   76 (247)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTTCCEEEEECCTTSTTTTTTSST----
T ss_pred             CCcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhCCcEEEEEccCCCHHHHHHHHH----
Confidence            458999999999999999999999999999999999999865  35566777888899999999999998887764    


Q ss_pred             HcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCccccccCCCChhhhh
Q 024230           94 LFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIVSANVGTVYSA  172 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~~~~~~~~~~~y~~  172 (270)
                       + +++|+||||||+....++.++++++|++++++|+.++|.++|+++|+|.+++ .|+|||+||..+..+.++...|++
T Consensus        77 -~-g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~a  154 (247)
T 4hp8_A           77 -D-AGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTA  154 (247)
T ss_dssp             -T-TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHHH
T ss_pred             -h-CCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHHH
Confidence             2 7999999999999999999999999999999999999999999999998764 699999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCcc
Q 024230          173 TKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT  252 (270)
Q Consensus       173 sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  252 (270)
                      ||+++.+|+|++|.||+++|||||+|+||+++|+|......++...+.+....|++|+++|+||+++++||+|++++|+|
T Consensus       155 sKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a~~iT  234 (247)
T 4hp8_A          155 AKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAAVFLSSAAADYVH  234 (247)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTSSCBCTHHHHHHHHHHTSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcCCc
Confidence            99999999999999999999999999999999999988777777777788899999999999999999999999999999


Q ss_pred             CcEEeecCCccc
Q 024230          253 GQTVCIDGGFTV  264 (270)
Q Consensus       253 G~~i~vdgG~~~  264 (270)
                      |++|.|||||+.
T Consensus       235 G~~i~VDGG~~A  246 (247)
T 4hp8_A          235 GAILNVDGGWLA  246 (247)
T ss_dssp             SCEEEESTTGGG
T ss_pred             CCeEEECccccc
Confidence            999999999874

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=6.3e-58  Score=388.11  Aligned_cols=242  Identities=27%  Similarity=0.436  Sum_probs=219.4

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+++.+++..+++   +.++.++.+|++|+++++++++++.+++ 
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~---g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-  101 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---GGGAVGIQADSANLAELDRLYEKVKAEA-  101 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCCeEEEEecCCCHHHHHHHHHHHHHHc-
Confidence            599999999999999999999999999999999999999988877665   5678899999999999999999999999 


Q ss_pred             CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHH
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGA  176 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaa  176 (270)
                      |++|+||||||.....++.+.++|+|++++++|+.+++.++++++|+|++  .|+||+++|..+..+.++...|++||+|
T Consensus       102 G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~--~G~IInisS~~~~~~~~~~~~Y~asKaa  179 (273)
T 4fgs_A          102 GRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR--GSSVVLTGSTAGSTGTPAFSVYAASKAA  179 (273)
T ss_dssp             SCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEECCGGGGSCCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCeEEEEeehhhccCCCCchHHHHHHHH
Confidence            89999999999999999999999999999999999999999999999965  4799999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC-----hhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCc
Q 024230          177 MNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN-----GKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI  251 (270)
Q Consensus       177 l~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  251 (270)
                      +.+|+|++|.|++++|||||+|+||+++|++...+...     ....+.+....|++|+++|+|||++++||+|++++|+
T Consensus       180 v~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~FLaSd~a~~i  259 (273)
T 4fgs_A          180 LRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFLASDDSSFV  259 (273)
T ss_dssp             HHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCc
Confidence            99999999999999999999999999999988776433     2234456778999999999999999999999999999


Q ss_pred             cCcEEeecCCccc
Q 024230          252 TGQTVCIDGGFTV  264 (270)
Q Consensus       252 ~G~~i~vdgG~~~  264 (270)
                      |||+|.||||++.
T Consensus       260 TG~~i~VDGG~s~  272 (273)
T 4fgs_A          260 TGAELFVDGGSAQ  272 (273)
T ss_dssp             CSCEEEESTTTTT
T ss_pred             cCCeEeECcChhh
Confidence            9999999999874

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=1.5e-57  Score=383.77  Aligned_cols=245  Identities=25%  Similarity=0.380  Sum_probs=219.7

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .|+|+||++|||||++|||+++|+.|+++|++|++++|+++..+ ..+++.+.+.++.++.+|++|+++++++++++.++
T Consensus         2 ~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~   80 (258)
T 4gkb_A            2 DLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FLDALAQRQPRATYLPVELQDDAQCRDAVAQTIAT   80 (258)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999988754 44556667788999999999999999999999999


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                      | +++|+||||||+.... ..+.+.++|++++++|+.+++.++++++|+|+++ +|+|||+||..+..+.++...|++||
T Consensus        81 ~-G~iDiLVNnAGi~~~~-~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~~~~~~~~~Y~asK  157 (258)
T 4gkb_A           81 F-GRLDGLVNNAGVNDGI-GLDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT-RGAIVNISSKTAVTGQGNTSGYCASK  157 (258)
T ss_dssp             H-SCCCEEEECCCCCCCC-CTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCTHHHHCCSSCHHHHHHH
T ss_pred             h-CCCCEEEECCCCCCCC-CccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEeehhhccCCCCchHHHHHH
Confidence            9 8999999999986544 4578999999999999999999999999999765 49999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC----hhhHHHHhhcCCC-CCCCChHhHHHHHHHHhCCCCC
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN----GKFVDEVKSRTPM-GRLGEPKEVSSLVAFLCMPAAS  249 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~s~~~~  249 (270)
                      +|+.+|+|++|.|++++|||||+|+||+++|+|.+.+...    +...+++....|+ +|+.+|+|+|++++||+|+.++
T Consensus       158 aav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~peeiA~~v~fLaS~~a~  237 (258)
T 4gkb_A          158 GAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTAVFLLSPRAS  237 (258)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhc
Confidence            9999999999999999999999999999999998776432    3445667778888 4899999999999999999999


Q ss_pred             CccCcEEeecCCcc
Q 024230          250 YITGQTVCIDGGFT  263 (270)
Q Consensus       250 ~~~G~~i~vdgG~~  263 (270)
                      |+|||+|.|||||+
T Consensus       238 ~iTG~~i~VDGG~T  251 (258)
T 4gkb_A          238 HTTGEWLFVDGGYT  251 (258)
T ss_dssp             TCCSCEEEESTTTT
T ss_pred             CccCCeEEECCCcc
Confidence            99999999999996

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=2.2e-57  Score=377.46  Aligned_cols=233  Identities=34%  Similarity=0.582  Sum_probs=211.4

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      ++||++|||||++|||+++|+.|+++|++|++++|+++.+++      ..+.++..+.+|++|++++++++++    + +
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~------~~~~~~~~~~~Dv~~~~~v~~~~~~----~-g   77 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA------PRHPRIRREELDITDSQRLQRLFEA----L-P   77 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS------CCCTTEEEEECCTTCHHHHHHHHHH----C-S
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh------hhcCCeEEEEecCCCHHHHHHHHHh----c-C
Confidence            589999999999999999999999999999999999876542      2346789999999999998887754    5 8


Q ss_pred             cccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHH
Q 024230           98 KLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAM  177 (270)
Q Consensus        98 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal  177 (270)
                      ++|+||||||+.  .++.+.+.++|++++++|+.+++.++|+++|+|+++ +|+|||+||..+..+.++...|++||+|+
T Consensus        78 ~iDiLVNNAGi~--~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~~~~~~~~~Y~asKaav  154 (242)
T 4b79_A           78 RLDVLVNNAGIS--RDREEYDLATFERVLRLNLSAAMLASQLARPLLAQR-GGSILNIASMYSTFGSADRPAYSASKGAI  154 (242)
T ss_dssp             CCSEEEECCCCC--CGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-CEEEEEECCGGGTSCCSSCHHHHHHHHHH
T ss_pred             CCCEEEECCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEeeccccCCCCCCHHHHHHHHHH
Confidence            999999999985  467789999999999999999999999999999765 49999999999999999999999999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEEe
Q 024230          178 NQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVC  257 (270)
Q Consensus       178 ~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~  257 (270)
                      .+|+|++|.||+++|||||+|+||+++|+|......+++..+.+....|++|+.+|+|++++++||+|++++|+||++|.
T Consensus       155 ~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a~~iTG~~l~  234 (242)
T 4b79_A          155 VQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLARWGEAPEVASAAAFLCGPGASFVTGAVLA  234 (242)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEE
T ss_pred             HHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCccCceEE
Confidence            99999999999999999999999999999998887777788888899999999999999999999999999999999999


Q ss_pred             ecCCccc
Q 024230          258 IDGGFTV  264 (270)
Q Consensus       258 vdgG~~~  264 (270)
                      |||||+.
T Consensus       235 VDGG~la  241 (242)
T 4b79_A          235 VDGGYLC  241 (242)
T ss_dssp             ESTTGGG
T ss_pred             ECccHhh
Confidence            9999974

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=5.6e-56  Score=375.36  Aligned_cols=248  Identities=23%  Similarity=0.242  Sum_probs=230.1

Q ss_pred             cCCCCCCEEEEecCCC--cHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcC-CeEEEEEccCCCHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTK--GLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG-LKVTGSVCDVSSRPQRQTLINTV   91 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~--giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~i   91 (270)
                      +++|+||++|||||+|  |||+++|+.|+++|++|++++|+++.++++.+++++.+ .++.++.+|++++++++++++++
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   80 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQI   80 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHH
Confidence            5899999999999875  99999999999999999999999999999888887764 57899999999999999999999


Q ss_pred             HHHcCCcccEEEECCCCCCC----CCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCC
Q 024230           92 SSLFNGKLNIFVNNVGTSVL----KPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG  167 (270)
Q Consensus        92 ~~~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~  167 (270)
                      .+.+ +++|+||||||....    .++.+.+.++|...+++|+.+++.+.+.+.|+|++  +|+||++||..+..+.++.
T Consensus        81 ~~~~-G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~--~G~IVnisS~~~~~~~~~~  157 (256)
T 4fs3_A           81 GKDV-GNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPE--GGSIVATTYLGGEFAVQNY  157 (256)
T ss_dssp             HHHH-CCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTT--CEEEEEEECGGGTSCCTTT
T ss_pred             HHHh-CCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCEEEEEeccccccCcccc
Confidence            9999 899999999998643    45568899999999999999999999999887754  5899999999999999999


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCC
Q 024230          168 TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA  247 (270)
Q Consensus       168 ~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (270)
                      ..|++||+|+.+|+|+||.|++++|||||+|+||+++|++.+.....+...+++....|++|+.+|+|++++++||+|++
T Consensus       158 ~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~peevA~~v~fL~Sd~  237 (256)
T 4fs3_A          158 NVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLKRNVDQVEVGKTAAYLLSDL  237 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGG
T ss_pred             hhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence            99999999999999999999999999999999999999998887666777788888999999999999999999999999


Q ss_pred             CCCccCcEEeecCCcccc
Q 024230          248 ASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       248 ~~~~~G~~i~vdgG~~~~  265 (270)
                      ++|+|||+|.||||++..
T Consensus       238 a~~iTG~~i~VDGG~~av  255 (256)
T 4fs3_A          238 SSGVTGENIHVDSGFHAI  255 (256)
T ss_dssp             GTTCCSCEEEESTTGGGC
T ss_pred             hcCccCCEEEECcCHHhc
Confidence            999999999999999864

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=3.7e-55  Score=366.28  Aligned_cols=232  Identities=22%  Similarity=0.368  Sum_probs=212.6

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      +|+||||||++|||+++|+.|+++|++|++++|+++.++++.    +.+.++.++.+|++|+++++++++++.+++ +++
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~----~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~-g~i   76 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFA----KERPNLFYFHGDVADPLTLKKFVEYAMEKL-QRI   76 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH----TTCTTEEEEECCTTSHHHHHHHHHHHHHHH-SCC
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HhcCCEEEEEecCCCHHHHHHHHHHHHHHc-CCC
Confidence            599999999999999999999999999999999988776544    345678999999999999999999999999 899


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHHHH
Q 024230          100 NIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQ  179 (270)
Q Consensus       100 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal~~  179 (270)
                      |+||||||.....++.+.+.|+|++++++|+.+++.++|+++|+|.+++ |+||+++|..+..+.++...|++||+|+.+
T Consensus        77 DiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-G~IInisS~~~~~~~~~~~~Y~asKaal~~  155 (247)
T 3ged_A           77 DVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK-GRIINIASTRAFQSEPDSEAYASAKGGIVA  155 (247)
T ss_dssp             CEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CcEEEEeecccccCCCCCHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999998765 999999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEEeec
Q 024230          180 LAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCID  259 (270)
Q Consensus       180 ~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vd  259 (270)
                      |+|++|.|+++ |||||+|+||+++|++...+      .++.....|++|+++|+|+|++++||+|+  +|+|||+|.||
T Consensus       156 ltk~lA~ela~-~IrVN~I~PG~i~t~~~~~~------~~~~~~~~Pl~R~g~pediA~~v~fL~s~--~~iTG~~i~VD  226 (247)
T 3ged_A          156 LTHALAMSLGP-DVLVNCIAPGWINVTEQQEF------TQEDCAAIPAGKVGTPKDISNMVLFLCQQ--DFITGETIIVD  226 (247)
T ss_dssp             HHHHHHHHHTT-TSEEEEEEECSBCCCC---C------CHHHHHTSTTSSCBCHHHHHHHHHHHHHC--SSCCSCEEEES
T ss_pred             HHHHHHHHHCC-CCEEEEEecCcCCCCCcHHH------HHHHHhcCCCCCCcCHHHHHHHHHHHHhC--CCCCCCeEEEC
Confidence            99999999998 89999999999999987544      34556678999999999999999999984  69999999999


Q ss_pred             CCccccc
Q 024230          260 GGFTVNG  266 (270)
Q Consensus       260 gG~~~~~  266 (270)
                      ||++...
T Consensus       227 GG~s~r~  233 (247)
T 3ged_A          227 GGMSKRM  233 (247)
T ss_dssp             TTGGGCC
T ss_pred             cCHHHhC
Confidence            9998643

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=4.6e-55  Score=369.65  Aligned_cols=239  Identities=28%  Similarity=0.351  Sum_probs=213.3

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .|+|+||++|||||++|||+++|+.|+++|++|++++|++++.          ..+..++.+|++++++++++++++.++
T Consensus         6 l~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~~~~   75 (261)
T 4h15_A            6 FLNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG----------LPEELFVEADLTTKEGCAIVAEATRQR   75 (261)
T ss_dssp             CCCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT----------SCTTTEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC----------CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999976531          123446889999999999999999999


Q ss_pred             cCCcccEEEECCCCCC--CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCC-CChhhh
Q 024230           95 FNGKLNIFVNNVGTSV--LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSAN-VGTVYS  171 (270)
Q Consensus        95 ~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~-~~~~y~  171 (270)
                      + +++|+||||||...  ..++.+++.|+|++++++|+.+++.++++++|+|++++.|+||+++|..+..+.+ +...|+
T Consensus        76 ~-G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~~~~Y~  154 (261)
T 4h15_A           76 L-GGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPESTTAYA  154 (261)
T ss_dssp             T-SSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTTCHHHH
T ss_pred             c-CCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCccHHHH
Confidence            9 89999999999754  4578999999999999999999999999999999999999999999999998876 578899


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC--------C----hhhHHHHhhcCCCCCCCChHhHHHH
Q 024230          172 ATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG--------N----GKFVDEVKSRTPMGRLGEPKEVSSL  239 (270)
Q Consensus       172 ~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~--------~----~~~~~~~~~~~~~~~~~~~~dva~~  239 (270)
                      +||+|+.+|+|++|.|++++|||||+|+||+++|+|......        .    .+...+.....|++|+.+|+|+|++
T Consensus       155 asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peevA~~  234 (261)
T 4h15_A          155 AAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPEEVANL  234 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCCCcCHHHHHHH
Confidence            999999999999999999999999999999999998654321        1    2233344567899999999999999


Q ss_pred             HHHHhCCCCCCccCcEEeecCCccc
Q 024230          240 VAFLCMPAASYITGQTVCIDGGFTV  264 (270)
Q Consensus       240 ~~~l~s~~~~~~~G~~i~vdgG~~~  264 (270)
                      ++||+|++++|+||++|.||||+..
T Consensus       235 v~fLaS~~a~~itG~~i~VDGG~v~  259 (261)
T 4h15_A          235 IAFLASDRAASITGAEYTIDGGTVP  259 (261)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTCSC
T ss_pred             HHHHhCchhcCccCcEEEECCcCcc
Confidence            9999999999999999999999854

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=5.3e-53  Score=360.04  Aligned_cols=251  Identities=29%  Similarity=0.478  Sum_probs=236.6

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      .+++|+||++|||||++|||+++|++|+++|++|++++|+++.+++..+++...+.++.++.+|++|+++++++++++.+
T Consensus        20 ~~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   99 (271)
T 4ibo_A           20 IIFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDE   99 (271)
T ss_dssp             GGGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            35689999999999999999999999999999999999999999999999988888999999999999999999999999


Q ss_pred             HcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhh
Q 024230           94 LFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                      .+ +++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++|
T Consensus       100 ~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~as  178 (271)
T 4ibo_A          100 QG-IDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVA  178 (271)
T ss_dssp             HT-CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHH
T ss_pred             HC-CCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCchhHHHH
Confidence            98 89999999999988889999999999999999999999999999999999888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccC
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG  253 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  253 (270)
                      |+|+++|+++++.|++++||+||+|+||+++|+|.......+...+.+....|.+++.+|+|++++++||+++.++++||
T Consensus       179 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~~~~itG  258 (271)
T 4ibo_A          179 KGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQELVGTAVFLSASASDYVNG  258 (271)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCC
Confidence            99999999999999999999999999999999988776555566667777889999999999999999999999999999


Q ss_pred             cEEeecCCcccc
Q 024230          254 QTVCIDGGFTVN  265 (270)
Q Consensus       254 ~~i~vdgG~~~~  265 (270)
                      ++|.+|||+...
T Consensus       259 ~~i~vdGG~~~~  270 (271)
T 4ibo_A          259 QIIYVDGGMLSV  270 (271)
T ss_dssp             CEEEESTTGGGB
T ss_pred             cEEEECCCeecc
Confidence            999999998753

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=8e-53  Score=358.03  Aligned_cols=251  Identities=28%  Similarity=0.426  Sum_probs=234.5

Q ss_pred             cccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHHHHH
Q 024230           13 QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQM-KGLKVTGSVCDVSSRPQRQTLINTV   91 (270)
Q Consensus        13 ~~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i   91 (270)
                      ..+++|+||++|||||++|||+++|++|+++|++|++++|+++.+++..+++.+ .+.++.++.+|++|+++++++++++
T Consensus        13 ~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   92 (266)
T 4egf_A           13 AGVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRA   92 (266)
T ss_dssp             CGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence            446789999999999999999999999999999999999999999888888876 5778999999999999999999999


Q ss_pred             HHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCccccccCCCChhh
Q 024230           92 SSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIVSANVGTVY  170 (270)
Q Consensus        92 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~~~~~~~~~~~y  170 (270)
                      .+.+ +++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..++.+.++...|
T Consensus        93 ~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  171 (266)
T 4egf_A           93 AEAF-GGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAY  171 (266)
T ss_dssp             HHHH-TSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHH
T ss_pred             HHHc-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCChHH
Confidence            9999 8999999999998888899999999999999999999999999999998875 6899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCC
Q 024230          171 SATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY  250 (270)
Q Consensus       171 ~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  250 (270)
                      ++||+|+++|+++++.|++++||+||+|+||+++|++.............+....|.+++.+|+|++++++||+++.+++
T Consensus       172 ~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~  251 (266)
T 4egf_A          172 CTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVVWLASDAASM  251 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence            99999999999999999999999999999999999987766555556666777889999999999999999999999999


Q ss_pred             ccCcEEeecCCccc
Q 024230          251 ITGQTVCIDGGFTV  264 (270)
Q Consensus       251 ~~G~~i~vdgG~~~  264 (270)
                      +||++|.+|||+++
T Consensus       252 itG~~i~vdGG~~~  265 (266)
T 4egf_A          252 INGVDIPVDGGYTM  265 (266)
T ss_dssp             CCSCEEEESTTGGG
T ss_pred             ccCcEEEECCCccC
Confidence            99999999999976

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=4.9e-52  Score=352.44  Aligned_cols=250  Identities=30%  Similarity=0.452  Sum_probs=233.1

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcC-CeEEEEEccCCCHHHHHHHHHHHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG-LKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      .+++++||++|||||++|||+++|++|+++|++|++++|+++.+++..+++...+ .++.++.+|++|+++++++++++.
T Consensus         4 ~m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (262)
T 3pk0_A            4 SMFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAV   83 (262)
T ss_dssp             CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999999999999888888766 689999999999999999999999


Q ss_pred             HHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccc-ccCCCChhhh
Q 024230           93 SLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGI-VSANVGTVYS  171 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~-~~~~~~~~y~  171 (270)
                      +.+ +++|+||||||.....++.+.+.++|++++++|+.++++++++++|+|++++.|+||++||..+. .+.++...|+
T Consensus        84 ~~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~  162 (262)
T 3pk0_A           84 EEF-GGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYG  162 (262)
T ss_dssp             HHH-SCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTTCHHHH
T ss_pred             HHh-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCCChhhH
Confidence            999 89999999999988889999999999999999999999999999999998888999999999986 7888999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCc
Q 024230          172 ATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI  251 (270)
Q Consensus       172 ~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  251 (270)
                      +||+++++|+++++.|++++||+||+|+||+++|++....  .+...+.+....|.+++.+|+|++++++||+++.++++
T Consensus       163 asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~i  240 (262)
T 3pk0_A          163 ATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLEN--GEEYIASMARSIPAGALGTPEDIGHLAAFLATKEAGYI  240 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTT--CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcccccc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCC
Confidence            9999999999999999999999999999999999876543  34556667778899999999999999999999999999


Q ss_pred             cCcEEeecCCccccc
Q 024230          252 TGQTVCIDGGFTVNG  266 (270)
Q Consensus       252 ~G~~i~vdgG~~~~~  266 (270)
                      ||++|.+|||+.+..
T Consensus       241 tG~~i~vdGG~~~~~  255 (262)
T 3pk0_A          241 TGQAIAVDGGQVLPE  255 (262)
T ss_dssp             CSCEEEESTTTTCCS
T ss_pred             cCCEEEECCCeecCc
Confidence            999999999998754

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=5.8e-52  Score=351.23  Aligned_cols=250  Identities=27%  Similarity=0.386  Sum_probs=233.7

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEe-eCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTC-SRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      .+||++|||||++|||+++|++|+++|++|+++ +|+++.+++..+++...+.++.++.+|++|+++++++++++.+.+ 
T Consensus         2 ~~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   80 (258)
T 3oid_A            2 EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETF-   80 (258)
T ss_dssp             -CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            368999999999999999999999999999986 899999999999898888899999999999999999999999999 


Q ss_pred             CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHH
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGA  176 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaa  176 (270)
                      +++|+||||||.....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.++...|++||++
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  160 (258)
T 3oid_A           81 GRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAA  160 (258)
T ss_dssp             SCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCcHHHHHHHHH
Confidence            89999999999988889999999999999999999999999999999999888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEE
Q 024230          177 MNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTV  256 (270)
Q Consensus       177 l~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i  256 (270)
                      +++|+++++.|++++||+||+|+||+++|++...........+......|.+++.+|+|++++++||+++.++++||++|
T Consensus       161 ~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~~~itG~~i  240 (258)
T 3oid_A          161 LEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSKADMIRGQTI  240 (258)
T ss_dssp             HHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTTSSCBCHHHHHHHHHHHTSSTTTTCCSCEE
T ss_pred             HHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccCCccCCEE
Confidence            99999999999999999999999999999998776554555666777889999999999999999999999999999999


Q ss_pred             eecCCccccccc
Q 024230          257 CIDGGFTVNGFF  268 (270)
Q Consensus       257 ~vdgG~~~~~~~  268 (270)
                      .+|||++..+.+
T Consensus       241 ~vdGG~~~~~~~  252 (258)
T 3oid_A          241 IVDGGRSLLVLE  252 (258)
T ss_dssp             EESTTGGGBCC-
T ss_pred             EECCCccCCCCC
Confidence            999999987654

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=4.7e-52  Score=351.40  Aligned_cols=247  Identities=30%  Similarity=0.504  Sum_probs=231.8

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .++|+||++|||||++|||+++|++|+++|++|++++|+++.+++..+++...+.++.++.+|++|+++++++++++.+.
T Consensus         7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   86 (256)
T 3gaf_A            7 PFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQ   86 (256)
T ss_dssp             TTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999999999999999888889999999999999999999999999


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                      + +++|++|||||.....++ +.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.++...|++||
T Consensus        87 ~-g~id~lv~nAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  164 (256)
T 3gaf_A           87 F-GKITVLVNNAGGGGPKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSK  164 (256)
T ss_dssp             H-SCCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTTCHHHHHHH
T ss_pred             c-CCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCCchHHHHHH
Confidence            8 899999999999887777 89999999999999999999999999999998889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCc
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ  254 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  254 (270)
                      +++++|+++++.|++++||+|++|+||+++|++..... .+...+.+....|.+++.+|+|++++++||+++.++++||+
T Consensus       165 aa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~p~~r~~~~~dva~~~~~L~s~~~~~itG~  243 (256)
T 3gaf_A          165 AAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVL-TPEIERAMLKHTPLGRLGEAQDIANAALFLCSPAAAWISGQ  243 (256)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHC-CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhcc-CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCcccCccCC
Confidence            99999999999999999999999999999999876543 34455666778899999999999999999999999999999


Q ss_pred             EEeecCCccc
Q 024230          255 TVCIDGGFTV  264 (270)
Q Consensus       255 ~i~vdgG~~~  264 (270)
                      +|.+|||+..
T Consensus       244 ~i~vdgG~~~  253 (256)
T 3gaf_A          244 VLTVSGGGVQ  253 (256)
T ss_dssp             EEEESTTSCC
T ss_pred             EEEECCCccc
Confidence            9999999875

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=4.4e-52  Score=353.26  Aligned_cols=250  Identities=27%  Similarity=0.413  Sum_probs=227.2

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHh-cCC-eEEEEEccCCCHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQM-KGL-KVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~-~~~-~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      .++|+||++|||||++|||+++|++|+++|++|++++|+++.+++..+++.. .+. ++.++.+|++|+++++++++++.
T Consensus         3 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   82 (265)
T 3lf2_A            3 PYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACE   82 (265)
T ss_dssp             CCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence            3689999999999999999999999999999999999999999988888876 333 59999999999999999999999


Q ss_pred             HHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhh
Q 024230           93 SLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSA  172 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~  172 (270)
                      +.+ +++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||..+..+.++...|++
T Consensus        83 ~~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  161 (265)
T 3lf2_A           83 RTL-GCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSA  161 (265)
T ss_dssp             HHH-CSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTBHHHHH
T ss_pred             HHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCchhhHH
Confidence            998 8999999999998888999999999999999999999999999999999888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC-------Ch-hhHHHHhh--cCCCCCCCChHhHHHHHHH
Q 024230          173 TKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG-------NG-KFVDEVKS--RTPMGRLGEPKEVSSLVAF  242 (270)
Q Consensus       173 sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~-------~~-~~~~~~~~--~~~~~~~~~~~dva~~~~~  242 (270)
                      ||+|+++|+++++.|++++||+||+|+||+++|++......       .. ........  ..|.+++.+|+|++++++|
T Consensus       162 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~f  241 (265)
T 3lf2_A          162 ARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAILF  241 (265)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcCCCcCHHHHHHHHHH
Confidence            99999999999999999999999999999999998655432       11 11122222  2789999999999999999


Q ss_pred             HhCCCCCCccCcEEeecCCcccc
Q 024230          243 LCMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       243 l~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                      |+|+.++++||++|.+|||++.+
T Consensus       242 L~s~~~~~itG~~i~vdGG~~~~  264 (265)
T 3lf2_A          242 LASPLSAYTTGSHIDVSGGLSRH  264 (265)
T ss_dssp             HHSGGGTTCCSEEEEESSSCCCC
T ss_pred             HhCchhcCcCCCEEEECCCCcCC
Confidence            99999999999999999999764

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=3.5e-52  Score=354.78  Aligned_cols=249  Identities=29%  Similarity=0.468  Sum_probs=231.7

Q ss_pred             cccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           13 QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        13 ~~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      .+..+|++|++|||||++|||+++|++|+++|++|++++|+++.++++.+++...+.++.++.+|++|+++++++++++.
T Consensus        21 ~m~~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  100 (270)
T 3ftp_A           21 SMDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTL  100 (270)
T ss_dssp             --CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHH
Confidence            34567999999999999999999999999999999999999999999988888888889999999999999999999999


Q ss_pred             HHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhh
Q 024230           93 SLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSA  172 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~  172 (270)
                      +.+ +++|+||||||.....++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++
T Consensus       101 ~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  179 (270)
T 3ftp_A          101 KEF-GALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAA  179 (270)
T ss_dssp             HHH-SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHH
T ss_pred             HHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCchhHHH
Confidence            998 8999999999998888899999999999999999999999999999999888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCcc
Q 024230          173 TKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT  252 (270)
Q Consensus       173 sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  252 (270)
                      ||+|+++|+++++.|++++||+|++|+||+++|++...+  .......+....|.+++.+|+|++++++||+++.++++|
T Consensus       180 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~it  257 (270)
T 3ftp_A          180 AKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGL--PQEQQTALKTQIPLGRLGSPEDIAHAVAFLASPQAGYIT  257 (270)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHS--CHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhc--CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCCCcCCcc
Confidence            999999999999999999999999999999999987654  334455667788999999999999999999999999999


Q ss_pred             CcEEeecCCccc
Q 024230          253 GQTVCIDGGFTV  264 (270)
Q Consensus       253 G~~i~vdgG~~~  264 (270)
                      |++|.+|||+.+
T Consensus       258 G~~i~vdGG~~~  269 (270)
T 3ftp_A          258 GTTLHVNGGMFM  269 (270)
T ss_dssp             SCEEEESTTSSC
T ss_pred             CcEEEECCCccc
Confidence            999999999875

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=1.3e-51  Score=347.07  Aligned_cols=244  Identities=30%  Similarity=0.474  Sum_probs=227.2

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      +++++||++|||||++|||+++|++|+++|++|++++|+++.+++..+++..   +..++.+|++|+++++++++++.+.
T Consensus         4 ~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~   80 (248)
T 3op4_A            4 FMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD---NGKGMALNVTNPESIEAVLKAITDE   80 (248)
T ss_dssp             TTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG---GEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc---cceEEEEeCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999999988887777643   5778999999999999999999999


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                      + +++|++|||||.....++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++||
T Consensus        81 ~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  159 (248)
T 3op4_A           81 F-GGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAK  159 (248)
T ss_dssp             H-CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred             c-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHH
Confidence            9 899999999999888889999999999999999999999999999999988889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCc
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ  254 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  254 (270)
                      +|+++|+++++.|++++||+||+|+||+++|++.+..  .+..........|.+++.+|+|++++++||+++.++++||+
T Consensus       160 ~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~itG~  237 (248)
T 3op4_A          160 AGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKAL--NDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGE  237 (248)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTS--CHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCccCCccCc
Confidence            9999999999999999999999999999999998765  33445556677899999999999999999999999999999


Q ss_pred             EEeecCCccc
Q 024230          255 TVCIDGGFTV  264 (270)
Q Consensus       255 ~i~vdgG~~~  264 (270)
                      +|.+|||+.+
T Consensus       238 ~i~vdgG~~~  247 (248)
T 3op4_A          238 TLHVNGGMYM  247 (248)
T ss_dssp             EEEESTTSSC
T ss_pred             EEEECCCeec
Confidence            9999999864

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.9e-52  Score=355.69  Aligned_cols=252  Identities=30%  Similarity=0.401  Sum_probs=223.9

Q ss_pred             cccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           13 QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        13 ~~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      ..+|++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.
T Consensus        21 ~~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  100 (283)
T 3v8b_A           21 QSMMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLV  100 (283)
T ss_dssp             ------CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             hhhcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999999999999999998888899999999999999999999999


Q ss_pred             HHcCCcccEEEECCCCCC-CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccc--cCCCChh
Q 024230           93 SLFNGKLNIFVNNVGTSV-LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIV--SANVGTV  169 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~--~~~~~~~  169 (270)
                      +.+ +++|++|||||... ..++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..  +.++...
T Consensus       101 ~~~-g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~~~  179 (283)
T 3v8b_A          101 LKF-GHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATA  179 (283)
T ss_dssp             HHH-SCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCSTTCHH
T ss_pred             HHh-CCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCCCchH
Confidence            998 89999999999865 4788999999999999999999999999999999988889999999999987  7788999


Q ss_pred             hhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhh-----HHHHhhcCCC--CCCCChHhHHHHHHH
Q 024230          170 YSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKF-----VDEVKSRTPM--GRLGEPKEVSSLVAF  242 (270)
Q Consensus       170 y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~-----~~~~~~~~~~--~~~~~~~dva~~~~~  242 (270)
                      |++||+|+++|+++++.|++++||+||+|+||+++|++..........     .+......|.  ++..+|+|+|++++|
T Consensus       180 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pedvA~~v~f  259 (283)
T 3v8b_A          180 YTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRF  259 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHHHHHHHHHH
Confidence            999999999999999999999999999999999999998765322221     1112334455  889999999999999


Q ss_pred             HhCCCCCCccCcEEeecCCcccc
Q 024230          243 LCMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       243 l~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                      |+++.++++||++|.+|||+++.
T Consensus       260 L~s~~a~~itG~~i~vdGG~~~~  282 (283)
T 3v8b_A          260 LVSERARHVTGSPVWIDGGQGLL  282 (283)
T ss_dssp             HTSGGGTTCCSCEEEESTTHHHH
T ss_pred             HcCccccCCcCCEEEECcCcccc
Confidence            99999999999999999998764

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=1.3e-51  Score=348.93  Aligned_cols=253  Identities=24%  Similarity=0.395  Sum_probs=229.8

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+++.+++..+++...+.++.++.+|++|+++++++++++.+.+
T Consensus         2 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (257)
T 3imf_A            2 NAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKF   81 (257)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            35789999999999999999999999999999999999999999998888778899999999999999999999999998


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLR-ASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~-~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                       +++|+||||||.....++.+.+.++|++++++|+.+++.++++++|+|. +.+.|+||++||..+..+.++...|++||
T Consensus        82 -g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  160 (257)
T 3imf_A           82 -GRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAK  160 (257)
T ss_dssp             -SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTCHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCcHHHHHHH
Confidence             8999999999998888999999999999999999999999999999994 44578999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHc-cCCceEEEEecCcccCCCCcccc-CChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCcc
Q 024230          175 GAMNQLAKNLACEWA-KDNIRTNSVAPWYIRTPFTEPLL-GNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT  252 (270)
Q Consensus       175 aal~~~~~sla~el~-~~~i~v~~v~pG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  252 (270)
                      +|+++|+++++.|++ ++||+||+|+||+++|++..... ..+...+.+....|.+++.+|+|++++++||+++.++++|
T Consensus       161 aa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~it  240 (257)
T 3imf_A          161 AGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGLAYYLCSDEAAYIN  240 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTSTTCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCcc
Confidence            999999999999998 77999999999999999765432 1233445566778999999999999999999999999999


Q ss_pred             CcEEeecCCcccccccc
Q 024230          253 GQTVCIDGGFTVNGFFF  269 (270)
Q Consensus       253 G~~i~vdgG~~~~~~~~  269 (270)
                      |+++.+|||+++...+|
T Consensus       241 G~~i~vdGG~~~~~~~~  257 (257)
T 3imf_A          241 GTCMTMDGGQHLHQYPF  257 (257)
T ss_dssp             SCEEEESTTTTSCCCC-
T ss_pred             CCEEEECCCcccCCCCC
Confidence            99999999999988776

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=1.6e-51  Score=354.58  Aligned_cols=252  Identities=29%  Similarity=0.382  Sum_probs=234.1

Q ss_pred             cccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcC-CeEEEEEccCCCHHHHHHHHHHH
Q 024230           13 QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG-LKVTGSVCDVSSRPQRQTLINTV   91 (270)
Q Consensus        13 ~~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~i   91 (270)
                      ..+++|+||++|||||++|||+++|++|+++|++|++++|+++.+++..+++...+ .++.++.+|++|+++++++++++
T Consensus        34 ~~m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  113 (293)
T 3rih_A           34 KVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTV  113 (293)
T ss_dssp             CCTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHH
Confidence            34679999999999999999999999999999999999999999999888887766 68999999999999999999999


Q ss_pred             HHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccc-ccCCCChhh
Q 024230           92 SSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGI-VSANVGTVY  170 (270)
Q Consensus        92 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~-~~~~~~~~y  170 (270)
                      .+.+ +++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||..+. .+.++...|
T Consensus       114 ~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~~~~Y  192 (293)
T 3rih_A          114 VDAF-GALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHY  192 (293)
T ss_dssp             HHHH-SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTTCHHH
T ss_pred             HHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCCCHHH
Confidence            9999 89999999999988889999999999999999999999999999999999888999999999986 788899999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCC
Q 024230          171 SATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY  250 (270)
Q Consensus       171 ~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  250 (270)
                      ++||+++++|+++++.|++++||+||+|+||+++|++....  .+...+.+....|.+++.+|+|++++++||+++.+++
T Consensus       193 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s~~a~~  270 (293)
T 3rih_A          193 GASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDM--GEEYISGMARSIPMGMLGSPVDIGHLAAFLATDEAGY  270 (293)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHT--CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhc--cHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccC
Confidence            99999999999999999999999999999999999876554  2455666777889999999999999999999999999


Q ss_pred             ccCcEEeecCCcccccc
Q 024230          251 ITGQTVCIDGGFTVNGF  267 (270)
Q Consensus       251 ~~G~~i~vdgG~~~~~~  267 (270)
                      +||++|.+|||+.+...
T Consensus       271 itG~~i~vdGG~~~~~~  287 (293)
T 3rih_A          271 ITGQAIVVDGGQVLPES  287 (293)
T ss_dssp             CCSCEEEESTTTTCBSS
T ss_pred             CCCCEEEECCCccCCCC
Confidence            99999999999998653

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=1.4e-51  Score=350.32  Aligned_cols=246  Identities=29%  Similarity=0.403  Sum_probs=216.0

Q ss_pred             cccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           13 QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        13 ~~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      ..+++|+||++|||||++|||+++|++|+++|++|++++|+++.+++..+++   +.++.++.+|++|+++++++++++.
T Consensus        20 ~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~   96 (266)
T 3grp_A           20 GSMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL---GKDVFVFSANLSDRKSIKQLAEVAE   96 (266)
T ss_dssp             -CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CSSEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cchhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEeecCCHHHHHHHHHHHH
Confidence            4567999999999999999999999999999999999999998887776544   5689999999999999999999999


Q ss_pred             HHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhh
Q 024230           93 SLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSA  172 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~  172 (270)
                      +.+ +++|+||||||.....++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++
T Consensus        97 ~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~a  175 (266)
T 3grp_A           97 REM-EGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCA  175 (266)
T ss_dssp             HHH-TSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------CHHHHHH
T ss_pred             HHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCCchhHHH
Confidence            998 8999999999998888889999999999999999999999999999999888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCcc
Q 024230          173 TKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT  252 (270)
Q Consensus       173 sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  252 (270)
                      ||+|+++|+++++.|++++||+||+|+||+++|++....  .+...+.+....|.+++.+|+|++++++||+++.++++|
T Consensus       176 sKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~~~~it  253 (266)
T 3grp_A          176 AKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKL--NEKQKEAIMAMIPMKRMGIGEEIAFATVYLASDEAAYLT  253 (266)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTC--CHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhcc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcc
Confidence            999999999999999999999999999999999987654  344556677788999999999999999999999999999


Q ss_pred             CcEEeecCCccc
Q 024230          253 GQTVCIDGGFTV  264 (270)
Q Consensus       253 G~~i~vdgG~~~  264 (270)
                      |++|.+|||+.+
T Consensus       254 G~~i~vdGG~~~  265 (266)
T 3grp_A          254 GQTLHINGGMAM  265 (266)
T ss_dssp             SCEEEESTTC--
T ss_pred             CCEEEECCCeee
Confidence            999999999874

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=2.8e-51  Score=351.09  Aligned_cols=251  Identities=26%  Similarity=0.377  Sum_probs=233.2

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCC---eEEEEEccCCCHHHHHHHHHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGL---KVTGSVCDVSSRPQRQTLINT   90 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~   90 (270)
                      +.++++||++|||||++|||+++|++|+++|++|++++|+++.+++..+++...+.   ++.++.+|++|++++++++++
T Consensus         5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   84 (281)
T 3svt_A            5 MQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDA   84 (281)
T ss_dssp             ---CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHH
Confidence            35689999999999999999999999999999999999999999999888887655   899999999999999999999


Q ss_pred             HHHHcCCcccEEEECCCC-CCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChh
Q 024230           91 VSSLFNGKLNIFVNNVGT-SVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTV  169 (270)
Q Consensus        91 i~~~~~~~id~li~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~  169 (270)
                      +.+.+ +++|++|||||. ....++.+.+.++|++.+++|+.++++++++++|+|.+++.|+||++||..+..+.+....
T Consensus        85 ~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  163 (281)
T 3svt_A           85 VTAWH-GRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGA  163 (281)
T ss_dssp             HHHHH-SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTCTH
T ss_pred             HHHHc-CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCChh
Confidence            99998 899999999998 5567888999999999999999999999999999999988899999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCC
Q 024230          170 YSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAAS  249 (270)
Q Consensus       170 y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  249 (270)
                      |++||+++++|+++++.|++++||+||+|+||+++|++...........+.+....|.++..+|+|++++++||+++.++
T Consensus       164 Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~  243 (281)
T 3svt_A          164 YGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAMFLLSDAAS  243 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSSSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccC
Confidence            99999999999999999999999999999999999999877655566666777788999999999999999999999999


Q ss_pred             CccCcEEeecCCcccc
Q 024230          250 YITGQTVCIDGGFTVN  265 (270)
Q Consensus       250 ~~~G~~i~vdgG~~~~  265 (270)
                      ++||+++.+|||+.+.
T Consensus       244 ~itG~~~~vdgG~~~~  259 (281)
T 3svt_A          244 FVTGQVINVDGGQMLR  259 (281)
T ss_dssp             TCCSCEEEESTTGGGS
T ss_pred             CCCCCEEEeCCChhcc
Confidence            9999999999999887

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=2.3e-51  Score=349.54  Aligned_cols=244  Identities=31%  Similarity=0.460  Sum_probs=227.0

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeC-ChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSR-TETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      .++++||++|||||++|||+++|++|+++|++|++++| +.+..++..+++...+.++.++.+|++|+++++++++++.+
T Consensus        23 ~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~  102 (269)
T 4dmm_A           23 ALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIE  102 (269)
T ss_dssp             -CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999988 66677788888888888999999999999999999999999


Q ss_pred             HcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhh
Q 024230           94 LFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                      .+ +++|+||||||.....++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++|
T Consensus       103 ~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  181 (269)
T 4dmm_A          103 RW-GRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAA  181 (269)
T ss_dssp             HH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTCHHHHHH
T ss_pred             Hc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCchhHHHH
Confidence            98 89999999999988888899999999999999999999999999999998888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCC-CCCCcc
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP-AASYIT  252 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~-~~~~~~  252 (270)
                      |+|+++|+++++.|++++||+|++|+||+++|+|.....     .+.+....|.+++.+|+|++++++||+++ .++++|
T Consensus       182 K~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-----~~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~~~~it  256 (269)
T 4dmm_A          182 KAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELA-----AEKLLEVIPLGRYGEAAEVAGVVRFLAADPAAAYIT  256 (269)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHH-----HHHHGGGCTTSSCBCHHHHHHHHHHHHHCGGGGGCC
T ss_pred             HHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCccccccc-----HHHHHhcCCCCCCCCHHHHHHHHHHHhCCcccCCCc
Confidence            999999999999999999999999999999999875532     24566778999999999999999999998 889999


Q ss_pred             CcEEeecCCccc
Q 024230          253 GQTVCIDGGFTV  264 (270)
Q Consensus       253 G~~i~vdgG~~~  264 (270)
                      |++|.+|||+.+
T Consensus       257 G~~i~vdGG~~~  268 (269)
T 4dmm_A          257 GQVINIDGGLVM  268 (269)
T ss_dssp             SCEEEESTTSCC
T ss_pred             CCEEEECCCeec
Confidence            999999999876

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=7.5e-51  Score=348.26  Aligned_cols=252  Identities=26%  Similarity=0.344  Sum_probs=231.1

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      +.+++||++|||||++|||+++|++|+++|++|++++|+++.+++..+++...+.++.++.+|++|+++++++++++.+.
T Consensus         3 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (280)
T 3tox_A            3 MSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRR   82 (280)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            35689999999999999999999999999999999999999999999988877889999999999999999999999999


Q ss_pred             cCCcccEEEECCCCC-CCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccc-ccCCCChhhhh
Q 024230           95 FNGKLNIFVNNVGTS-VLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGI-VSANVGTVYSA  172 (270)
Q Consensus        95 ~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~-~~~~~~~~y~~  172 (270)
                      + +++|+||||||.. ...++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+. .+.++...|++
T Consensus        83 ~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~a  161 (280)
T 3tox_A           83 F-GGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAA  161 (280)
T ss_dssp             H-SCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTTCHHHHH
T ss_pred             c-CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCCchhHHH
Confidence            8 7999999999986 4578889999999999999999999999999999999888999999999998 77888999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCcccc--CChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCC
Q 024230          173 TKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLL--GNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY  250 (270)
Q Consensus       173 sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  250 (270)
                      ||+|+++|+++++.|++++||+||+|+||+++|++.....  ..+.....+....|.+++.+|+|+|++++||+++.+++
T Consensus       162 sKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~a~~  241 (280)
T 3tox_A          162 SKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLASDGASF  241 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCccCCCcCHHHHHHHHHHHhCccccC
Confidence            9999999999999999999999999999999999876532  23445556667788999999999999999999999999


Q ss_pred             ccCcEEeecCCcccccc
Q 024230          251 ITGQTVCIDGGFTVNGF  267 (270)
Q Consensus       251 ~~G~~i~vdgG~~~~~~  267 (270)
                      +||++|.+|||+++...
T Consensus       242 itG~~i~vdGG~~~~~~  258 (280)
T 3tox_A          242 VTGAALLADGGASVTKA  258 (280)
T ss_dssp             CCSCEEEESTTGGGCC-
T ss_pred             CcCcEEEECCCcccccc
Confidence            99999999999987653

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=9.8e-51  Score=346.90  Aligned_cols=248  Identities=31%  Similarity=0.506  Sum_probs=229.3

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      ..++|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++...+.++.++.+|++|+++++++++++.+
T Consensus        26 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  105 (276)
T 3r1i_A           26 DLFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTG  105 (276)
T ss_dssp             GGGCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999999999999999988888999999999999999999999999


Q ss_pred             HcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCccccccC--CCChhh
Q 024230           94 LFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIVSA--NVGTVY  170 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~~~~~~--~~~~~y  170 (270)
                      .+ +++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..+..+.  +....|
T Consensus       106 ~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~~~Y  184 (276)
T 3r1i_A          106 EL-GGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHY  184 (276)
T ss_dssp             HH-SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCCHHH
T ss_pred             Hc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCcchH
Confidence            99 8999999999998888899999999999999999999999999999998876 4899999999987654  356889


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCC
Q 024230          171 SATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY  250 (270)
Q Consensus       171 ~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  250 (270)
                      ++||+|+++|+++++.|++++||+||+|+||+++|++....   ....+......|.+++.+|+|++++++||+++.+++
T Consensus       185 ~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~---~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~~~  261 (276)
T 3r1i_A          185 CTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPL---ADYHALWEPKIPLGRMGRPEELTGLYLYLASAASSY  261 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGG---GGGHHHHGGGSTTSSCBCGGGSHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccc---hHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccC
Confidence            99999999999999999999999999999999999998765   334556677789999999999999999999999999


Q ss_pred             ccCcEEeecCCcccc
Q 024230          251 ITGQTVCIDGGFTVN  265 (270)
Q Consensus       251 ~~G~~i~vdgG~~~~  265 (270)
                      +||++|.+|||+..+
T Consensus       262 itG~~i~vdGG~~~~  276 (276)
T 3r1i_A          262 MTGSDIVIDGGYTCP  276 (276)
T ss_dssp             CCSCEEEESTTTTCC
T ss_pred             ccCcEEEECcCccCC
Confidence            999999999999753

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=1.2e-50  Score=340.87  Aligned_cols=244  Identities=28%  Similarity=0.461  Sum_probs=227.6

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeC-ChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSR-TETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      +++|++|||||++|||+++|++|+++|++|+++++ +++..++..+++...+.++.++.+|++|+++++++++++.+.+ 
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-   80 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQF-   80 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-
Confidence            57899999999999999999999999999999877 5577788888888888899999999999999999999999998 


Q ss_pred             CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHH
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGA  176 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaa  176 (270)
                      +++|++|||||.....++.+.+.++|++.+++|+.++++++++++|+|.+++.|+||++||..+..+.++...|++||++
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  160 (246)
T 3osu_A           81 GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAG  160 (246)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHH
Confidence            89999999999988888999999999999999999999999999999998888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEE
Q 024230          177 MNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTV  256 (270)
Q Consensus       177 l~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i  256 (270)
                      +++|+++++.|++++||+||+|+||+++|++....  .+...+......|.+++.+|+|++++++||+++.++++||+++
T Consensus       161 ~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~~itG~~i  238 (246)
T 3osu_A          161 VIGLTKSAARELASRGITVNAVAPGFIVSDMTDAL--SDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTI  238 (246)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCS--CHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEE
T ss_pred             HHHHHHHHHHHhcccCeEEEEEEECCCcCCccccc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEE
Confidence            99999999999999999999999999999998665  3455666777889999999999999999999999999999999


Q ss_pred             eecCCccc
Q 024230          257 CIDGGFTV  264 (270)
Q Consensus       257 ~vdgG~~~  264 (270)
                      .+|||+.+
T Consensus       239 ~vdgG~~~  246 (246)
T 3osu_A          239 HVNGGMYM  246 (246)
T ss_dssp             EESTTSCC
T ss_pred             EeCCCccC
Confidence            99999864

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=6.5e-51  Score=347.49  Aligned_cols=250  Identities=28%  Similarity=0.448  Sum_probs=228.8

Q ss_pred             cccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           13 QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        13 ~~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      ...++|+||++|||||++|||+++|++|+++|++|++++|+ +..++..+++...+.++.++.+|++|+++++++.+.+ 
T Consensus        24 ~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~-  101 (273)
T 3uf0_A           24 TGPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGGGSAEAVVADLADLEGAANVAEEL-  101 (273)
T ss_dssp             -CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHH-
T ss_pred             ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH-
Confidence            34578999999999999999999999999999999999966 5566777778777889999999999999999995555 


Q ss_pred             HHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhh
Q 024230           93 SLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSA  172 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~  172 (270)
                      +.+ +++|+||||||.....++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++
T Consensus       102 ~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~a  180 (273)
T 3uf0_A          102 AAT-RRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAA  180 (273)
T ss_dssp             HHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSCHHHHH
T ss_pred             Hhc-CCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCCChhHHH
Confidence            445 7999999999998888999999999999999999999999999999999888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCcc
Q 024230          173 TKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT  252 (270)
Q Consensus       173 sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  252 (270)
                      ||+|+++|+++++.|++++||+||+|+||+++|++.......+...+.+....|.+++.+|+|++++++||+++.++++|
T Consensus       181 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~a~~it  260 (273)
T 3uf0_A          181 SKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLASDAASYVH  260 (273)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTTSSCBCGGGGHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCCc
Confidence            99999999999999999999999999999999998877665666667777888999999999999999999999999999


Q ss_pred             CcEEeecCCcccc
Q 024230          253 GQTVCIDGGFTVN  265 (270)
Q Consensus       253 G~~i~vdgG~~~~  265 (270)
                      |++|.||||+.++
T Consensus       261 G~~i~vdGG~~~s  273 (273)
T 3uf0_A          261 GQVLAVDGGWLAS  273 (273)
T ss_dssp             SCEEEESTTGGGC
T ss_pred             CCEEEECcCccCC
Confidence            9999999998753

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=3.2e-51  Score=350.45  Aligned_cols=247  Identities=29%  Similarity=0.460  Sum_probs=226.4

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      .+++|++|||||++|||+++|++|+++|++|++++|+++.+++..+++...+.++.++.+|++|+++++++++++.+.+ 
T Consensus        21 m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-   99 (279)
T 3sju_A           21 MSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERF-   99 (279)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            4689999999999999999999999999999999999999999999998888899999999999999999999999998 


Q ss_pred             CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHH--HHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHP--LLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                      +++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|  .|.+++.|+||++||..+..+.++...|++||
T Consensus       100 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asK  179 (279)
T 3sju_A          100 GPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASK  179 (279)
T ss_dssp             CSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCChhHHHHH
Confidence            8999999999998888899999999999999999999999999999  58887789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCcccc---------CChhhHHHHhhcCCCCCCCChHhHHHHHHHHhC
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLL---------GNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCM  245 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (270)
                      +|+++|+++++.|++++||+|++|+||+++|+|.....         ......+.+....|.+++.+|+|+|++++||++
T Consensus       180 aa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s  259 (279)
T 3sju_A          180 HGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLVGYLVT  259 (279)
T ss_dssp             HHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTSSCBCHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhC
Confidence            99999999999999999999999999999999865432         123445566778899999999999999999999


Q ss_pred             CCCCCccCcEEeecCCccc
Q 024230          246 PAASYITGQTVCIDGGFTV  264 (270)
Q Consensus       246 ~~~~~~~G~~i~vdgG~~~  264 (270)
                      +.++++||++|.+|||++.
T Consensus       260 ~~a~~itG~~i~vdGG~~~  278 (279)
T 3sju_A          260 DAAASITAQALNVCGGLGN  278 (279)
T ss_dssp             SGGGGCCSCEEEESTTCCC
T ss_pred             ccccCcCCcEEEECCCccC
Confidence            9999999999999999875

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=6.8e-51  Score=345.72  Aligned_cols=248  Identities=22%  Similarity=0.273  Sum_probs=228.8

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      +..|+||++|||||++|||+++|++|+++|++|++++|+++.+++..+++...+.++.++.+|++|+++++++++++.+.
T Consensus         6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   85 (264)
T 3ucx_A            6 GGLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKA   85 (264)
T ss_dssp             -CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            34689999999999999999999999999999999999999999999999888889999999999999999999999999


Q ss_pred             cCCcccEEEECCCCC-CCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhh
Q 024230           95 FNGKLNIFVNNVGTS-VLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        95 ~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                      + +++|++|||||.. ...++.+.+.++|++++++|+.+++.++++++|+|.+++ |+||++||..+..+.++...|++|
T Consensus        86 ~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~as  163 (264)
T 3ucx_A           86 Y-GRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQAKYGAYKMA  163 (264)
T ss_dssp             T-SCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCCTTCHHHHHH
T ss_pred             c-CCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCCCccHHHHHH
Confidence            8 8999999999985 567888999999999999999999999999999998875 999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC---------ChhhHHHHhhcCCCCCCCChHhHHHHHHHHh
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG---------NGKFVDEVKSRTPMGRLGEPKEVSSLVAFLC  244 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  244 (270)
                      |+++++|+++++.|++++||+||+|+||+++|++...+..         .+...+.+....|.+++.+|+|++++++||+
T Consensus       164 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~  243 (264)
T 3ucx_A          164 KSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAILFMA  243 (264)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCCHHHHHHHHHHHc
Confidence            9999999999999999999999999999999998755421         1334455667789999999999999999999


Q ss_pred             CCCCCCccCcEEeecCCccc
Q 024230          245 MPAASYITGQTVCIDGGFTV  264 (270)
Q Consensus       245 s~~~~~~~G~~i~vdgG~~~  264 (270)
                      ++.++++||++|.+|||+.+
T Consensus       244 s~~~~~itG~~i~vdGG~~~  263 (264)
T 3ucx_A          244 SDLASGITGQALDVNCGEYK  263 (264)
T ss_dssp             SGGGTTCCSCEEEESTTSSC
T ss_pred             CccccCCCCCEEEECCCccC
Confidence            99999999999999999875

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=1e-50  Score=346.91  Aligned_cols=251  Identities=27%  Similarity=0.452  Sum_probs=226.4

Q ss_pred             ccccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Q 024230           12 RQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTV   91 (270)
Q Consensus        12 ~~~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i   91 (270)
                      ....|+++||++|||||++|||+++|++|+++|++|++++|+++.+++..+++   +.++.++.+|++|+++++++++++
T Consensus        19 ~~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~   95 (277)
T 4dqx_A           19 YFQSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI---GSKAFGVRVDVSSAKDAESMVEKT   95 (277)
T ss_dssp             ---CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHH
Confidence            34457899999999999999999999999999999999999998887776654   567899999999999999999999


Q ss_pred             HHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhh
Q 024230           92 SSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYS  171 (270)
Q Consensus        92 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~  171 (270)
                      .+.+ +++|+||||||.....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.++...|+
T Consensus        96 ~~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  174 (277)
T 4dqx_A           96 TAKW-GRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYV  174 (277)
T ss_dssp             HHHH-SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTBHHHH
T ss_pred             HHHc-CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCChhHH
Confidence            9998 899999999999888899999999999999999999999999999999988889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCcccc-CC---hhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCC
Q 024230          172 ATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLL-GN---GKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA  247 (270)
Q Consensus       172 ~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (270)
                      +||+|+++|+++++.|++++||+|++|+||+++|++..... ..   ......+....+.+++.+|+|+|++++||+++.
T Consensus       175 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~  254 (277)
T 4dqx_A          175 ASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFLASDR  254 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCcccCCcCHHHHHHHHHHHhCCc
Confidence            99999999999999999999999999999999999843321 11   122233667788999999999999999999999


Q ss_pred             CCCccCcEEeecCCccccc
Q 024230          248 ASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       248 ~~~~~G~~i~vdgG~~~~~  266 (270)
                      ++++||++|.+|||+++..
T Consensus       255 ~~~itG~~i~vdGG~~~~~  273 (277)
T 4dqx_A          255 SRFATGSILTVDGGSSIGN  273 (277)
T ss_dssp             GTTCCSCEEEESSSSSSCC
T ss_pred             cCCCcCCEEEECCchhhhh
Confidence            9999999999999998764

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=2.7e-50  Score=347.99  Aligned_cols=250  Identities=24%  Similarity=0.329  Sum_probs=222.3

Q ss_pred             cccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCC------------hhHHHHHHHHHHhcCCeEEEEEccCCC
Q 024230           13 QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRT------------ETELNECIHHLQMKGLKVTGSVCDVSS   80 (270)
Q Consensus        13 ~~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~------------~~~~~~~~~~~~~~~~~~~~~~~D~~~   80 (270)
                      .+..+|+||++|||||++|||+++|++|+++|++|++++|+            .+.+++..+++...+.++.++.+|++|
T Consensus        21 ~m~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~  100 (299)
T 3t7c_A           21 SMAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRD  100 (299)
T ss_dssp             -CCCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred             ccccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCC
Confidence            34568999999999999999999999999999999999987            677888888888888899999999999


Q ss_pred             HHHHHHHHHHHHHHcCCcccEEEECCCCCCCCC-CCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCc
Q 024230           81 RPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKP-TLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSA  158 (270)
Q Consensus        81 ~~~~~~~~~~i~~~~~~~id~li~~ag~~~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~  158 (270)
                      +++++++++++.+.+ +++|+||||||.....+ +.+.+.++|++++++|+.+++.++++++|+|.+++ .|+||++||.
T Consensus       101 ~~~v~~~~~~~~~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~  179 (299)
T 3t7c_A          101 FDAMQAAVDDGVTQL-GRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSI  179 (299)
T ss_dssp             HHHHHHHHHHHHHHH-SCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCG
T ss_pred             HHHHHHHHHHHHHHh-CCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECCh
Confidence            999999999999998 89999999999877655 88999999999999999999999999999987764 6899999999


Q ss_pred             cccccCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCcccc---------CChhh-----HHHHhhc
Q 024230          159 LGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLL---------GNGKF-----VDEVKSR  224 (270)
Q Consensus       159 ~~~~~~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~---------~~~~~-----~~~~~~~  224 (270)
                      .+..+.++...|++||+|+++|+++++.|++++||+||+|+||+++|+|.....         .....     .......
T Consensus       180 ~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (299)
T 3t7c_A          180 GGLRGAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHV  259 (299)
T ss_dssp             GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHSS
T ss_pred             hhccCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhhcc
Confidence            999999999999999999999999999999999999999999999999875421         00100     0113334


Q ss_pred             CCCCCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCccc
Q 024230          225 TPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTV  264 (270)
Q Consensus       225 ~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~  264 (270)
                      .| +++.+|+|+|++++||+++.++++||++|.||||+++
T Consensus       260 ~p-~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~l  298 (299)
T 3t7c_A          260 LP-IPYVEPADISNAILFLVSDDARYITGVSLPVDGGALL  298 (299)
T ss_dssp             SS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             cC-cCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCccc
Confidence            45 7888999999999999999999999999999999976

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=8.4e-51  Score=350.68  Aligned_cols=253  Identities=21%  Similarity=0.218  Sum_probs=227.6

Q ss_pred             cccCCCCCCEEEEecCCC--cHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Q 024230           13 QNRWSLQGMTALVTGGTK--GLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINT   90 (270)
Q Consensus        13 ~~~~~l~gk~vlItG~s~--giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   90 (270)
                      ..+++|+||++|||||+|  |||+++|++|+++|++|++++|+++..+...+.+...+ .+.++.+|++|++++++++++
T Consensus        23 ~~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~  101 (296)
T 3k31_A           23 RTGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLG-VKLTVPCDVSDAESVDNMFKV  101 (296)
T ss_dssp             CCCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHT-CCEEEECCTTCHHHHHHHHHH
T ss_pred             cchhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcC-CeEEEEcCCCCHHHHHHHHHH
Confidence            446789999999999997  99999999999999999999999876555554444443 468899999999999999999


Q ss_pred             HHHHcCCcccEEEECCCCCCC----CCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCC
Q 024230           91 VSSLFNGKLNIFVNNVGTSVL----KPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANV  166 (270)
Q Consensus        91 i~~~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~  166 (270)
                      +.+.+ +++|+||||||....    .++.+.+.++|++.+++|+.+++.++++++|+|++  .|+||++||..+..+.++
T Consensus       102 ~~~~~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~IV~isS~~~~~~~~~  178 (296)
T 3k31_A          102 LAEEW-GSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN--GGSILTLSYYGAEKVVPH  178 (296)
T ss_dssp             HHHHH-SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTSCCTT
T ss_pred             HHHHc-CCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCEEEEEEehhhccCCCC
Confidence            99999 899999999999764    78889999999999999999999999999999966  689999999999999999


Q ss_pred             ChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCC
Q 024230          167 GTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP  246 (270)
Q Consensus       167 ~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (270)
                      ...|++||+|+++|+++++.|++++||+||+|+||+++|++...........+......|.+++.+|+|+|++++||+++
T Consensus       179 ~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~  258 (296)
T 3k31_A          179 YNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPLRRNTTLDDVGGAALYLLSD  258 (296)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSG
T ss_pred             chhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCC
Confidence            99999999999999999999999999999999999999999876644344556667778999999999999999999999


Q ss_pred             CCCCccCcEEeecCCcccccccc
Q 024230          247 AASYITGQTVCIDGGFTVNGFFF  269 (270)
Q Consensus       247 ~~~~~~G~~i~vdgG~~~~~~~~  269 (270)
                      .++++||++|.+|||+++.++.+
T Consensus       259 ~a~~itG~~i~vdGG~~~~~~~~  281 (296)
T 3k31_A          259 LGRGTTGETVHVDCGYHVVGMKS  281 (296)
T ss_dssp             GGTTCCSCEEEESTTGGGCSSCC
T ss_pred             ccCCccCCEEEECCCccccCCcc
Confidence            99999999999999999988753

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=3.2e-50  Score=345.29  Aligned_cols=248  Identities=24%  Similarity=0.316  Sum_probs=221.6

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCC----------------hhHHHHHHHHHHhcCCeEEEEEccC
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRT----------------ETELNECIHHLQMKGLKVTGSVCDV   78 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~----------------~~~~~~~~~~~~~~~~~~~~~~~D~   78 (270)
                      +.+|+||++|||||++|||+++|++|+++|++|++++|+                .+.+++..+++...+.++.++.+|+
T Consensus         6 ~~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv   85 (286)
T 3uve_A            6 TGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDV   85 (286)
T ss_dssp             CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCT
T ss_pred             CcccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCC
Confidence            457899999999999999999999999999999999887                6777888888877788999999999


Q ss_pred             CCHHHHHHHHHHHHHHcCCcccEEEECCCCCCCCC-CCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEec
Q 024230           79 SSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKP-TLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMS  156 (270)
Q Consensus        79 ~~~~~~~~~~~~i~~~~~~~id~li~~ag~~~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~is  156 (270)
                      +|+++++++++++.+.+ +++|+||||||.....+ +.+.+.++|++++++|+.+++.++++++|+|.+++ .|+||++|
T Consensus        86 ~~~~~v~~~~~~~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~is  164 (286)
T 3uve_A           86 RDYDALKAAVDSGVEQL-GRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTS  164 (286)
T ss_dssp             TCHHHHHHHHHHHHHHH-SCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEEC
T ss_pred             CCHHHHHHHHHHHHHHh-CCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEEC
Confidence            99999999999999999 89999999999876654 88899999999999999999999999999998865 68999999


Q ss_pred             CccccccCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCcccc-----------CChhhHH---HHh
Q 024230          157 SALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLL-----------GNGKFVD---EVK  222 (270)
Q Consensus       157 s~~~~~~~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~-----------~~~~~~~---~~~  222 (270)
                      |..+..+.++...|++||+|+++|+++++.|++++||+||+|+||+++|+|.....           .......   ...
T Consensus       165 S~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (286)
T 3uve_A          165 SVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMF  244 (286)
T ss_dssp             CGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHTT
T ss_pred             chhhccCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHHHHHHhh
Confidence            99999999999999999999999999999999999999999999999999875411           0111111   123


Q ss_pred             hcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCccc
Q 024230          223 SRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTV  264 (270)
Q Consensus       223 ~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~  264 (270)
                      ...| +++.+|+|++++++||+|+.++++||++|.||||+++
T Consensus       245 ~~~p-~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l  285 (286)
T 3uve_A          245 HTLP-IPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL  285 (286)
T ss_dssp             CSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             hccC-CCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcccc
Confidence            3455 7889999999999999999999999999999999875

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=2.3e-50  Score=343.03  Aligned_cols=260  Identities=33%  Similarity=0.574  Sum_probs=227.1

Q ss_pred             CCcccccccccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHH-HhcCCeEEEEEccCCCHHH
Q 024230            5 QQTESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHL-QMKGLKVTGSVCDVSSRPQ   83 (270)
Q Consensus         5 ~~~~~~~~~~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~   83 (270)
                      -.++.+......++++|++|||||++|||+++|++|+++|++|++++|+++.+++..+++ ...+.++.++.+|++++++
T Consensus         6 ~~~~~~~~~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~   85 (267)
T 1vl8_A            6 IHHHHHHMKEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEE   85 (267)
T ss_dssp             -----------CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHH
T ss_pred             cCCCCCCCCCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence            334444445567899999999999999999999999999999999999999888877777 4446788999999999999


Q ss_pred             HHHHHHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcc-ccc
Q 024230           84 RQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSAL-GIV  162 (270)
Q Consensus        84 ~~~~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~-~~~  162 (270)
                      ++++++++.+.+ +++|+||||||.....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||.. +..
T Consensus        86 v~~~~~~~~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~  164 (267)
T 1vl8_A           86 VKKLLEAVKEKF-GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV  164 (267)
T ss_dssp             HHHHHHHHHHHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCC
T ss_pred             HHHHHHHHHHHc-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhcc
Confidence            999999999998 799999999999887888899999999999999999999999999999888789999999998 888


Q ss_pred             cCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHH
Q 024230          163 SANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAF  242 (270)
Q Consensus       163 ~~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  242 (270)
                      +.++...|++||+++++|+++++.|++++||+|++|+||+++|+|...+...+.....+....|.+++.+|+|+|+.++|
T Consensus       165 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~  244 (267)
T 1vl8_A          165 TMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVF  244 (267)
T ss_dssp             CSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHH
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccChHHHHHHHhhCCCCCCcCHHHHHHHHHH
Confidence            88889999999999999999999999999999999999999999876543233344445566788899999999999999


Q ss_pred             HhCCCCCCccCcEEeecCCcccc
Q 024230          243 LCMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       243 l~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                      |+++.+++++|+++.+|||+.++
T Consensus       245 l~s~~~~~itG~~i~vdGG~~~~  267 (267)
T 1vl8_A          245 LASEEAKYVTGQIIFVDGGWTAN  267 (267)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HcCccccCCcCCeEEECCCCCCC
Confidence            99998899999999999998764

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=7.5e-51  Score=342.25  Aligned_cols=244  Identities=26%  Similarity=0.375  Sum_probs=221.8

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+++.+++..+++   +.++.++.+|++|+++++++++++.+.+
T Consensus         2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   78 (247)
T 3rwb_A            2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI---GKKARAIAADISDPGSVKALFAEIQALT   78 (247)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence            5689999999999999999999999999999999999999888777666   5689999999999999999999999998


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCccccccCCCChhhhhhH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                       +++|+||||||.....++.+.+.++|++++++|+.+++.++++++|+|++++ .|+||++||..+..+.++...|++||
T Consensus        79 -g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  157 (247)
T 3rwb_A           79 -GGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAK  157 (247)
T ss_dssp             -SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhhHHHH
Confidence             7999999999999888899999999999999999999999999999998876 68999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCc
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ  254 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  254 (270)
                      +|+++|+++++.|++++||+||+|+||+++|++....... ..........+.++..+|+|+++++.||+++.++++||+
T Consensus       158 aa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~r~~~pedva~~v~~L~s~~~~~itG~  236 (247)
T 3rwb_A          158 GGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHN-EAFGFVEMLQAMKGKGQPEHIADVVSFLASDDARWITGQ  236 (247)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGG-GGHHHHHHHSSSCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChh-HHHHHHhcccccCCCcCHHHHHHHHHHHhCccccCCCCC
Confidence            9999999999999999999999999999999976654221 112222233788999999999999999999999999999


Q ss_pred             EEeecCCccc
Q 024230          255 TVCIDGGFTV  264 (270)
Q Consensus       255 ~i~vdgG~~~  264 (270)
                      +|.+|||+..
T Consensus       237 ~i~vdGG~~~  246 (247)
T 3rwb_A          237 TLNVDAGMVR  246 (247)
T ss_dssp             EEEESTTSSC
T ss_pred             EEEECCCccC
Confidence            9999999864

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=5.9e-50  Score=341.54  Aligned_cols=254  Identities=55%  Similarity=0.918  Sum_probs=225.5

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      ..++++||+++||||++|||+++|++|+++|++|++++|+++.+++..+++...+.++.++.+|++|+++++++++++.+
T Consensus        15 ~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   94 (273)
T 1ae1_A           15 GRWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAH   94 (273)
T ss_dssp             -CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            34679999999999999999999999999999999999999988888888877777899999999999999999999998


Q ss_pred             HcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhh
Q 024230           94 LFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                      .+++++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||..++.+.++...|++|
T Consensus        95 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as  174 (273)
T 1ae1_A           95 VFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSAS  174 (273)
T ss_dssp             HTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             HcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCCcchhHHH
Confidence            87568999999999988888899999999999999999999999999999988878999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC----ChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCC
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG----NGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAAS  249 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  249 (270)
                      |+++++|+++++.|++++||+|++|+||+++|++......    .....+.+....|.+++.+|+|+|++++||+++.++
T Consensus       175 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~  254 (273)
T 1ae1_A          175 KGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAAS  254 (273)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence            9999999999999999999999999999999998765432    223344455567889999999999999999999899


Q ss_pred             CccCcEEeecCCcccccc
Q 024230          250 YITGQTVCIDGGFTVNGF  267 (270)
Q Consensus       250 ~~~G~~i~vdgG~~~~~~  267 (270)
                      +++|+++.+|||+++.++
T Consensus       255 ~~tG~~i~vdGG~~~~~~  272 (273)
T 1ae1_A          255 YITGQIIWADGGFTANGG  272 (273)
T ss_dssp             TCCSCEEEESTTGGGCSC
T ss_pred             CcCCCEEEECCCcccCCC
Confidence            999999999999987653

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=1.6e-50  Score=346.19  Aligned_cols=249  Identities=27%  Similarity=0.415  Sum_probs=221.7

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeC-------------ChhHHHHHHHHHHhcCCeEEEEEccCCC
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSR-------------TETELNECIHHLQMKGLKVTGSVCDVSS   80 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r-------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~   80 (270)
                      .+.+|+||++|||||++|||+++|++|+++|++|++++|             +++.+++..+++...+.++.++.+|++|
T Consensus         9 ~~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   88 (280)
T 3pgx_A            9 QAGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRD   88 (280)
T ss_dssp             --CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC
T ss_pred             cccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCC
Confidence            356899999999999999999999999999999999998             6778888888888888899999999999


Q ss_pred             HHHHHHHHHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCcc
Q 024230           81 RPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSAL  159 (270)
Q Consensus        81 ~~~~~~~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~  159 (270)
                      +++++++++++.+.+ +++|+||||||.....++.+.+.++|++++++|+.+++.++++++|+|.+++ .|+||++||..
T Consensus        89 ~~~v~~~~~~~~~~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~  167 (280)
T 3pgx_A           89 DAALRELVADGMEQF-GRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSA  167 (280)
T ss_dssp             HHHHHHHHHHHHHHH-CCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGG
T ss_pred             HHHHHHHHHHHHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchh
Confidence            999999999999998 8999999999998888899999999999999999999999999999998875 78999999999


Q ss_pred             ccccCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCcccc------CChhhHHH--HhhcCCCCCCC
Q 024230          160 GIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLL------GNGKFVDE--VKSRTPMGRLG  231 (270)
Q Consensus       160 ~~~~~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~------~~~~~~~~--~~~~~~~~~~~  231 (270)
                      +..+.++...|++||+|+++|+++++.|++++||+|++|+||+++|++.....      ..+...+.  .....|. ++.
T Consensus       168 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-r~~  246 (280)
T 3pgx_A          168 GLKATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPN-GFM  246 (280)
T ss_dssp             GTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCCBTTBCS-SCB
T ss_pred             hccCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhhcccCCC-CCC
Confidence            99999999999999999999999999999999999999999999999875411      01111111  1122334 688


Q ss_pred             ChHhHHHHHHHHhCCCCCCccCcEEeecCCccc
Q 024230          232 EPKEVSSLVAFLCMPAASYITGQTVCIDGGFTV  264 (270)
Q Consensus       232 ~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~  264 (270)
                      +|+|+|++++||+++.++++||++|.+|||+..
T Consensus       247 ~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~  279 (280)
T 3pgx_A          247 TADEVADVVAWLAGDGSGTLTGTQIPVDKGALK  279 (280)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCSSCEEEESTTGGG
T ss_pred             CHHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence            999999999999999999999999999999875

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=1.6e-50  Score=345.71  Aligned_cols=249  Identities=25%  Similarity=0.378  Sum_probs=221.8

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeC-------------ChhHHHHHHHHHHhcCCeEEEEEccCCC
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSR-------------TETELNECIHHLQMKGLKVTGSVCDVSS   80 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r-------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~   80 (270)
                      ++.+|+||++|||||++|||+++|++|+++|++|++++|             +.+.+++..+++...+.++.++.+|++|
T Consensus         5 m~~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   84 (277)
T 3tsc_A            5 MAGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRD   84 (277)
T ss_dssp             --CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred             cccccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCC
Confidence            345799999999999999999999999999999999998             6777888888888878899999999999


Q ss_pred             HHHHHHHHHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCcc
Q 024230           81 RPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSAL  159 (270)
Q Consensus        81 ~~~~~~~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~  159 (270)
                      +++++++++++.+.+ +++|+||||||.....++.+.+.++|++++++|+.+++.++++++|+|.+++ .|+||++||..
T Consensus        85 ~~~v~~~~~~~~~~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~  163 (277)
T 3tsc_A           85 FDRLRKVVDDGVAAL-GRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAA  163 (277)
T ss_dssp             HHHHHHHHHHHHHHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGG
T ss_pred             HHHHHHHHHHHHHHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHh
Confidence            999999999999998 8999999999998888889999999999999999999999999999998875 68999999999


Q ss_pred             ccccCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCcccc---------CChhhHHHHhhcCCCCCC
Q 024230          160 GIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLL---------GNGKFVDEVKSRTPMGRL  230 (270)
Q Consensus       160 ~~~~~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~  230 (270)
                      +..+.++...|++||+|+++|+++++.|++++||+||+|+||+++|+|.....         ..+.....+....|. ++
T Consensus       164 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-r~  242 (277)
T 3tsc_A          164 GMKMQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPD-WV  242 (277)
T ss_dssp             GTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCCSSSC-SC
T ss_pred             hCCCCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhhccCC-CC
Confidence            99999999999999999999999999999999999999999999999875411         011111122223344 68


Q ss_pred             CChHhHHHHHHHHhCCCCCCccCcEEeecCCccc
Q 024230          231 GEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTV  264 (270)
Q Consensus       231 ~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~  264 (270)
                      .+|+|+|++++||+++.++++||++|.+|||++.
T Consensus       243 ~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  276 (277)
T 3tsc_A          243 AEPEDIADTVCWLASDESRKVTAAQIPVDQGSTQ  276 (277)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCHHHHHHHHHHHhCccccCCcCCEEeeCCCccc
Confidence            8999999999999999999999999999999875

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=9.3e-51  Score=347.23  Aligned_cols=251  Identities=25%  Similarity=0.362  Sum_probs=229.9

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQM-KGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      ..|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.. .+.++.++.+|++|+++++++++++.+.
T Consensus        23 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  102 (277)
T 4fc7_A           23 DLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKE  102 (277)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999999988888777754 3678999999999999999999999999


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                      + +++|+||||||.....++.+.+.++|++++++|+.++++++++++|+|.+++.|+||++||..+..+.++...|++||
T Consensus       103 ~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  181 (277)
T 4fc7_A          103 F-GRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAK  181 (277)
T ss_dssp             H-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTCHHHHHHH
T ss_pred             c-CCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCcHHHHHHH
Confidence            8 899999999999888889999999999999999999999999999999888789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCcc-ccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccC
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEP-LLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG  253 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  253 (270)
                      +|+++|+++++.|++++||+||+|+||+++|++... ...............|.+++.+|+|++++++||+++.++++||
T Consensus       182 aa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s~~~~~itG  261 (277)
T 4fc7_A          182 AAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLYLASPLASYVTG  261 (277)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCCCCCcCHHHHHHHHHHHcCCccCCcCC
Confidence            999999999999999999999999999999985432 2223445566677889999999999999999999999999999


Q ss_pred             cEEeecCCcccccc
Q 024230          254 QTVCIDGGFTVNGF  267 (270)
Q Consensus       254 ~~i~vdgG~~~~~~  267 (270)
                      ++|.+|||+.+...
T Consensus       262 ~~i~vdGG~~~~~~  275 (277)
T 4fc7_A          262 AVLVADGGAWLTFP  275 (277)
T ss_dssp             CEEEESTTHHHHCC
T ss_pred             CEEEECCCcccCCC
Confidence            99999999987643

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=9.9e-51  Score=347.58  Aligned_cols=250  Identities=25%  Similarity=0.392  Sum_probs=204.2

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeC-ChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSR-TETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      +.++++|++|||||++|||+++|++|+++|++|++++| +++.+++..+++...+.++.++.+|++|+++++++++++.+
T Consensus        24 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  103 (280)
T 4da9_A           24 MTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVA  103 (280)
T ss_dssp             CSCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHH
T ss_pred             hhccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            44789999999999999999999999999999999995 77778888888888888999999999999999999999999


Q ss_pred             HcCCcccEEEECCCC--CCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC---CcEEEEecCccccccCCCCh
Q 024230           94 LFNGKLNIFVNNVGT--SVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG---AASIVLMSSALGIVSANVGT  168 (270)
Q Consensus        94 ~~~~~id~li~~ag~--~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~---~g~ii~iss~~~~~~~~~~~  168 (270)
                      .+ +++|+||||||.  ....++.+.+.++|++++++|+.+++.++++++|+|.+++   .|+||++||..+..+.++..
T Consensus       104 ~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~  182 (280)
T 4da9_A          104 EF-GRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERL  182 (280)
T ss_dssp             HH-SCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CCH
T ss_pred             Hc-CCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCcc
Confidence            98 899999999998  4567888999999999999999999999999999998765   68999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhh-cCCCCCCCChHhHHHHHHHHhCCC
Q 024230          169 VYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKS-RTPMGRLGEPKEVSSLVAFLCMPA  247 (270)
Q Consensus       169 ~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dva~~~~~l~s~~  247 (270)
                      .|++||+|+++|+++++.|++++||+|++|+||+++|++......  ........ ..|.+++.+|+|+|++++||+++.
T Consensus       183 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~  260 (280)
T 4da9_A          183 DYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSG--KYDGLIESGLVPMRRWGEPEDIGNIVAGLAGGQ  260 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CCBCHHHHHHHHHHHHTST
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcch--hHHHHHhhcCCCcCCcCCHHHHHHHHHHHhCcc
Confidence            999999999999999999999999999999999999998876532  22222333 578899999999999999999999


Q ss_pred             CCCccCcEEeecCCcccccc
Q 024230          248 ASYITGQTVCIDGGFTVNGF  267 (270)
Q Consensus       248 ~~~~~G~~i~vdgG~~~~~~  267 (270)
                      ++++||++|.+|||+++.++
T Consensus       261 ~~~itG~~i~vdGG~~~~~~  280 (280)
T 4da9_A          261 FGFATGSVIQADGGLSIGRL  280 (280)
T ss_dssp             TGGGTTCEEEESTTCC----
T ss_pred             ccCCCCCEEEECCCcccCCC
Confidence            99999999999999988653

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.4e-50  Score=345.33  Aligned_cols=250  Identities=26%  Similarity=0.410  Sum_probs=217.8

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeC-ChhHHHHHHHHHHhc-CCeEEEEEccCCCHHHHHHHHHHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSR-TETELNECIHHLQMK-GLKVTGSVCDVSSRPQRQTLINTV   91 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r-~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~i   91 (270)
                      .+++|++|++|||||++|||+++|++|+++|++|++++| +.+.+++..+++... +.++.++.+|++|+++++++++++
T Consensus        19 ~~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   98 (281)
T 3v2h_A           19 YFQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMV   98 (281)
T ss_dssp             ---CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHH
T ss_pred             hhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHH
Confidence            367899999999999999999999999999999999999 666777777777765 578999999999999999999999


Q ss_pred             HHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhh
Q 024230           92 SSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYS  171 (270)
Q Consensus        92 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~  171 (270)
                      .+.+ +++|+||||||.....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.++...|+
T Consensus        99 ~~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  177 (281)
T 3v2h_A           99 ADRF-GGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYV  177 (281)
T ss_dssp             HHHT-SSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHH
T ss_pred             HHHC-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCCchHHH
Confidence            9998 899999999999888889999999999999999999999999999999998889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChh----------hHHHHhhcCCCCCCCChHhHHHHHH
Q 024230          172 ATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGK----------FVDEVKSRTPMGRLGEPKEVSSLVA  241 (270)
Q Consensus       172 ~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~dva~~~~  241 (270)
                      +||+|+++|+++++.|++++||+|++|+||+++|++.........          ..+.+....|.+++.+|+|++++++
T Consensus       178 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~  257 (281)
T 3v2h_A          178 AAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASLAL  257 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTCSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHH
Confidence            999999999999999999999999999999999998765432210          1122445678899999999999999


Q ss_pred             HHhCCCCCCccCcEEeecCCccc
Q 024230          242 FLCMPAASYITGQTVCIDGGFTV  264 (270)
Q Consensus       242 ~l~s~~~~~~~G~~i~vdgG~~~  264 (270)
                      ||+++.++++||++|.+|||+++
T Consensus       258 ~L~s~~a~~itG~~i~vdGG~~~  280 (281)
T 3v2h_A          258 YLAGDDAAQITGTHVSMDGGWTA  280 (281)
T ss_dssp             HHHSSGGGGCCSCEEEESTTGGG
T ss_pred             HHcCCCcCCCCCcEEEECCCccC
Confidence            99999999999999999999875

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=3.4e-50  Score=340.46  Aligned_cols=246  Identities=26%  Similarity=0.362  Sum_probs=224.8

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      +.+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.+.
T Consensus         3 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~   79 (259)
T 4e6p_A            3 MKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI---GPAAYAVQMDVTRQDSIDAAIAATVEH   79 (259)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCCceEEEeeCCCHHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999999888777666   457889999999999999999999999


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCccccccCCCChhhhhh
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                      + +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|.+++ .|+||++||..+..+.+....|++|
T Consensus        80 ~-g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  158 (259)
T 4e6p_A           80 A-GGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCAT  158 (259)
T ss_dssp             S-SSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             c-CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCChHHHHH
Confidence            8 8999999999998888999999999999999999999999999999998775 6899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCcccc---------CChhhHHHHhhcCCCCCCCChHhHHHHHHHHh
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLL---------GNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLC  244 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  244 (270)
                      |+++++|+++++.|++++||+|++|+||+++|++.....         ........+....|.+++.+|+|++++++||+
T Consensus       159 K~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~  238 (259)
T 4e6p_A          159 KAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFLA  238 (259)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHHHHHh
Confidence            999999999999999999999999999999999875541         12334445566789999999999999999999


Q ss_pred             CCCCCCccCcEEeecCCccc
Q 024230          245 MPAASYITGQTVCIDGGFTV  264 (270)
Q Consensus       245 s~~~~~~~G~~i~vdgG~~~  264 (270)
                      ++.++++||++|.+|||+.+
T Consensus       239 s~~~~~itG~~i~vdgG~~~  258 (259)
T 4e6p_A          239 SAESDYIVSQTYNVDGGNWM  258 (259)
T ss_dssp             SGGGTTCCSCEEEESTTSSC
T ss_pred             CCccCCCCCCEEEECcChhc
Confidence            99999999999999999875

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=6.1e-50  Score=336.39  Aligned_cols=246  Identities=30%  Similarity=0.449  Sum_probs=231.4

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      |++++|+++||||++|||+++|++|+++|++|++++|+++..++..++++..+.++.++.+|++|+++++++++++.+.+
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (247)
T 3lyl_A            1 MSLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAEN   80 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999999999999999998888899999999999999999999999988


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKG  175 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKa  175 (270)
                       +++|++|||||.....++.+.+.++|++.+++|+.+++.+++.++|+|.+++.|+||++||..+..+.++...|++||+
T Consensus        81 -~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  159 (247)
T 3lyl_A           81 -LAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKA  159 (247)
T ss_dssp             -CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCcHHHHHHHH
Confidence             7999999999998888888999999999999999999999999999999888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcE
Q 024230          176 AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT  255 (270)
Q Consensus       176 al~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  255 (270)
                      |+++|+++++.|++++||+|++|+||+++|++....  .+..........|.++..+|+|++++++||+++.+++++|++
T Consensus       160 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~tG~~  237 (247)
T 3lyl_A          160 GVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKL--TDEQKSFIATKIPSGQIGEPKDIAAAVAFLASEEAKYITGQT  237 (247)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTS--CHHHHHHHHTTSTTCCCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhc--cHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhCCCcCCccCCE
Confidence            999999999999999999999999999999998765  334445566778899999999999999999999999999999


Q ss_pred             EeecCCccc
Q 024230          256 VCIDGGFTV  264 (270)
Q Consensus       256 i~vdgG~~~  264 (270)
                      +.+|||+.+
T Consensus       238 i~vdgG~~~  246 (247)
T 3lyl_A          238 LHVNGGMYM  246 (247)
T ss_dssp             EEESTTSSC
T ss_pred             EEECCCEec
Confidence            999999975

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=6.2e-50  Score=342.69  Aligned_cols=249  Identities=27%  Similarity=0.365  Sum_probs=222.7

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCC------------hhHHHHHHHHHHhcCCeEEEEEccCCCHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRT------------ETELNECIHHLQMKGLKVTGSVCDVSSRP   82 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~------------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   82 (270)
                      +++|+||++|||||++|||+++|++|+++|++|++++|+            .+.+++..+++...+.++.++.+|++|++
T Consensus         5 m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   84 (281)
T 3s55_A            5 MADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRA   84 (281)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHH
Confidence            568999999999999999999999999999999999997            56677777778777889999999999999


Q ss_pred             HHHHHHHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccc
Q 024230           83 QRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIV  162 (270)
Q Consensus        83 ~~~~~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~  162 (270)
                      +++++++++.+.+ +++|+||||||.....++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+..
T Consensus        85 ~v~~~~~~~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  163 (281)
T 3s55_A           85 ALESFVAEAEDTL-GGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHS  163 (281)
T ss_dssp             HHHHHHHHHHHHH-TCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS
T ss_pred             HHHHHHHHHHHhc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcC
Confidence            9999999999998 899999999999888899999999999999999999999999999999988889999999999999


Q ss_pred             cCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCcccc------C---Chh--hHHH---HhhcCCCC
Q 024230          163 SANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLL------G---NGK--FVDE---VKSRTPMG  228 (270)
Q Consensus       163 ~~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~------~---~~~--~~~~---~~~~~~~~  228 (270)
                      +.++...|++||+|+++|+++++.|++++||+|++|+||+++|+|.....      .   ...  ....   .....+ +
T Consensus       164 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  242 (281)
T 3s55_A          164 ANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQY-A  242 (281)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHHHCSSS-C
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHhhhccC-c
Confidence            99999999999999999999999999999999999999999999876411      0   000  0011   112233 7


Q ss_pred             CCCChHhHHHHHHHHhCCCCCCccCcEEeecCCcccc
Q 024230          229 RLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       229 ~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                      ++.+|+|++++++||+++.++++||++|.+|||+.+.
T Consensus       243 ~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~  279 (281)
T 3s55_A          243 PFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR  279 (281)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             CCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence            8899999999999999999999999999999999864

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=5.7e-51  Score=348.50  Aligned_cols=247  Identities=28%  Similarity=0.405  Sum_probs=219.5

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .++|+||++|||||++|||+++|++|+++|++|++++|+++.+++..+++   +.++.++.+|++|+++++++++++.+.
T Consensus        24 ~~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~  100 (277)
T 3gvc_A           24 HPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---GCGAAACRVDVSDEQQIIAMVDACVAA  100 (277)
T ss_dssp             ---CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CSSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCcceEEEecCCCHHHHHHHHHHHHHH
Confidence            45799999999999999999999999999999999999999888777666   567889999999999999999999999


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                      + +++|++|||||.....++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++||
T Consensus       101 ~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK  179 (277)
T 3gvc_A          101 F-GGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSK  179 (277)
T ss_dssp             H-SSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             c-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCchhHHHHH
Confidence            8 899999999999888899999999999999999999999999999999988889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC-h-hhHHHHh---hcCCCCCCCChHhHHHHHHHHhCCCCC
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN-G-KFVDEVK---SRTPMGRLGEPKEVSSLVAFLCMPAAS  249 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~-~-~~~~~~~---~~~~~~~~~~~~dva~~~~~l~s~~~~  249 (270)
                      +|+++|+++++.|++++||+|++|+||+++|++....... . .......   ...|.+++.+|+|++++++||+++.++
T Consensus       180 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~a~  259 (277)
T 3gvc_A          180 AGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDDAS  259 (277)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHHHHHHSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhhccccCCCCHHHHHHHHHHHcCCccC
Confidence            9999999999999999999999999999999986543221 0 1111111   134567899999999999999999999


Q ss_pred             CccCcEEeecCCcccc
Q 024230          250 YITGQTVCIDGGFTVN  265 (270)
Q Consensus       250 ~~~G~~i~vdgG~~~~  265 (270)
                      ++||++|.+|||+...
T Consensus       260 ~itG~~i~vdGG~~~~  275 (277)
T 3gvc_A          260 MITGTTQIADGGTIAA  275 (277)
T ss_dssp             TCCSCEEEESTTGGGS
T ss_pred             CccCcEEEECCcchhc
Confidence            9999999999998764

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=3.8e-50  Score=342.21  Aligned_cols=248  Identities=26%  Similarity=0.373  Sum_probs=223.4

Q ss_pred             cccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeC-ChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Q 024230           13 QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSR-TETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTV   91 (270)
Q Consensus        13 ~~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i   91 (270)
                      ..+.+|+||++|||||++|||+++|++|+++|++|+++++ +.+..++..+++...+.++.++.+|++|+++++++++++
T Consensus        11 ~~~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   90 (270)
T 3is3_A           11 YIPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQA   90 (270)
T ss_dssp             CCTTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             cCCCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            3456899999999999999999999999999999999766 456677888888888889999999999999999999999


Q ss_pred             HHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcc-ccccCCCChhh
Q 024230           92 SSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSAL-GIVSANVGTVY  170 (270)
Q Consensus        92 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~-~~~~~~~~~~y  170 (270)
                      .+.+ +++|+||||||.....++.+.+.++|++++++|+.++++++++++|+|++  .|+||++||.. +..+.++...|
T Consensus        91 ~~~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y  167 (270)
T 3is3_A           91 VAHF-GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE--GGRIVLTSSNTSKDFSVPKHSLY  167 (270)
T ss_dssp             HHHH-SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCTTTTTCCCTTCHHH
T ss_pred             HHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCeEEEEeCchhccCCCCCCchh
Confidence            9999 89999999999988889999999999999999999999999999999966  58999999988 56778889999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCcccc----------CChhhHHHHhhcCCCCCCCChHhHHHHH
Q 024230          171 SATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLL----------GNGKFVDEVKSRTPMGRLGEPKEVSSLV  240 (270)
Q Consensus       171 ~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~dva~~~  240 (270)
                      ++||+|+++|+++++.|++++||+||+|+||+++|+|.....          ......+......|.++..+|+|+++++
T Consensus       168 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v  247 (270)
T 3is3_A          168 SGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVV  247 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            999999999999999999999999999999999999875321          1123344456678999999999999999


Q ss_pred             HHHhCCCCCCccCcEEeecCCcc
Q 024230          241 AFLCMPAASYITGQTVCIDGGFT  263 (270)
Q Consensus       241 ~~l~s~~~~~~~G~~i~vdgG~~  263 (270)
                      +||+++.++++||++|.+|||+.
T Consensus       248 ~~L~s~~~~~itG~~i~vdGG~~  270 (270)
T 3is3_A          248 GFLVSKEGEWVNGKVLTLDGGAA  270 (270)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTCC
T ss_pred             HHHcCCccCCccCcEEEeCCCCC
Confidence            99999999999999999999974

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=9.2e-50  Score=340.02  Aligned_cols=246  Identities=29%  Similarity=0.447  Sum_probs=223.3

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      +.++++||++|||||++|||+++|++|+++|++|++++|+++.+++..+++   +.++.++.+|++|+++++++++++.+
T Consensus         5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (271)
T 3tzq_B            5 MTAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV---GRGAVHHVVDLTNEVSVRALIDFTID   81 (271)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCCeEEEECCCCCHHHHHHHHHHHHH
Confidence            346899999999999999999999999999999999999999888777666   56788899999999999999999999


Q ss_pred             HcCCcccEEEECCCCCC--CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhh
Q 024230           94 LFNGKLNIFVNNVGTSV--LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYS  171 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~  171 (270)
                      .+ +++|++|||||...  ..++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||..+..+.++...|+
T Consensus        82 ~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~  160 (271)
T 3tzq_B           82 TF-GRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYA  160 (271)
T ss_dssp             HH-SCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSSCHHHH
T ss_pred             Hc-CCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCCChHHH
Confidence            99 89999999999863  5567789999999999999999999999999999998889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCc
Q 024230          172 ATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI  251 (270)
Q Consensus       172 ~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  251 (270)
                      +||+++++|+++++.|++++||+||+|+||+++|++..... .....+.+....+.+++.+|+|++++++||+++.++++
T Consensus       161 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s~~~~~i  239 (271)
T 3tzq_B          161 CTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGL-PQPIVDIFATHHLAGRIGEPHEIAELVCFLASDRAAFI  239 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC----CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccC-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccCCc
Confidence            99999999999999999999999999999999999876332 34455667778899999999999999999999999999


Q ss_pred             cCcEEeecCCccc
Q 024230          252 TGQTVCIDGGFTV  264 (270)
Q Consensus       252 ~G~~i~vdgG~~~  264 (270)
                      ||++|.+|||+..
T Consensus       240 tG~~i~vdGG~~~  252 (271)
T 3tzq_B          240 TGQVIAADSGLLA  252 (271)
T ss_dssp             CSCEEEESTTTTT
T ss_pred             CCCEEEECCCccc
Confidence            9999999999543

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.7e-49  Score=338.36  Aligned_cols=243  Identities=29%  Similarity=0.427  Sum_probs=222.5

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCC-hhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRT-ETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      .++++||++|||||++|||+++|++|+++|++|++++++ .+..++..+++...+.++.++.+|++|+++++++++++.+
T Consensus        26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  105 (271)
T 3v2g_A           26 SISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVE  105 (271)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            467999999999999999999999999999999998655 4667778888888888999999999999999999999999


Q ss_pred             HcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccccc-CCCChhhhh
Q 024230           94 LFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVS-ANVGTVYSA  172 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~-~~~~~~y~~  172 (270)
                      .+ +++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|+|++  .|+||++||..+... .++...|++
T Consensus       106 ~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~~Y~a  182 (271)
T 3v2g_A          106 AL-GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD--GGRIITIGSNLAELVPWPGISLYSA  182 (271)
T ss_dssp             HH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCGGGTCCCSTTCHHHHH
T ss_pred             Hc-CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEeChhhccCCCCCchHHHH
Confidence            98 89999999999988889999999999999999999999999999999964  589999999877665 688899999


Q ss_pred             hHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCcc
Q 024230          173 TKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT  252 (270)
Q Consensus       173 sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  252 (270)
                      ||+|+++|+++++.|++++||+|++|+||+++|++....   ....+......|.+++.+|+|+|++++||+++.++++|
T Consensus       183 sKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~---~~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~~~~it  259 (271)
T 3v2g_A          183 SKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPAD---GDHAEAQRERIATGSYGEPQDIAGLVAWLAGPQGKFVT  259 (271)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSS---CSSHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCccccc---chhHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccCCcc
Confidence            999999999999999999999999999999999987653   34455666788999999999999999999999999999


Q ss_pred             CcEEeecCCcc
Q 024230          253 GQTVCIDGGFT  263 (270)
Q Consensus       253 G~~i~vdgG~~  263 (270)
                      |++|.||||+.
T Consensus       260 G~~i~vdGG~~  270 (271)
T 3v2g_A          260 GASLTIDGGAN  270 (271)
T ss_dssp             SCEEEESTTTT
T ss_pred             CCEEEeCcCcc
Confidence            99999999985

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=1.1e-50  Score=346.54  Aligned_cols=246  Identities=27%  Similarity=0.361  Sum_probs=225.1

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .++|+||++|||||++|||+++|++|+++|++|++++|+++.+++..+++...+.++.++.+|++++++++++++++.+.
T Consensus        28 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (275)
T 4imr_A           28 IFGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI  107 (275)
T ss_dssp             HHCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred             cCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh
Confidence            45799999999999999999999999999999999999999998888888888889999999999999999999999876


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                        +++|++|||||.....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.+....|++||
T Consensus       108 --g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK  185 (275)
T 4imr_A          108 --APVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAATK  185 (275)
T ss_dssp             --SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             --CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCchhhHHHH
Confidence              799999999999888889999999999999999999999999999999988889999999999999888888899999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC-ChhhHHHHhhcC-CCCCCCChHhHHHHHHHHhCCCCCCcc
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG-NGKFVDEVKSRT-PMGRLGEPKEVSSLVAFLCMPAASYIT  252 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~dva~~~~~l~s~~~~~~~  252 (270)
                      +|+++|+++++.|++++||+||+|+||+++|++...... .+.....+.... |.+++.+|+|++++++||+++.++++|
T Consensus       186 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~a~~it  265 (275)
T 4imr_A          186 AAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMGRAGRPEEMVGAALFLASEACSFMT  265 (275)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCccCCCcCHHHHHHHHHHHcCcccCCCC
Confidence            999999999999999999999999999999997655422 223333333334 889999999999999999999999999


Q ss_pred             CcEEeecCCc
Q 024230          253 GQTVCIDGGF  262 (270)
Q Consensus       253 G~~i~vdgG~  262 (270)
                      |++|.||||+
T Consensus       266 G~~i~vdGG~  275 (275)
T 4imr_A          266 GETIFLTGGY  275 (275)
T ss_dssp             SCEEEESSCC
T ss_pred             CCEEEeCCCC
Confidence            9999999996

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=8.7e-50  Score=337.31  Aligned_cols=245  Identities=31%  Similarity=0.400  Sum_probs=222.4

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      .+++||++|||||++|||+++|++|+++|++|++++|+++.++++.+++   +.++.++.+|++|+++++++++++.+.+
T Consensus         4 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (255)
T 4eso_A            4 GNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---GPRVHALRSDIADLNEIAVLGAAAGQTL   80 (255)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHHh
Confidence            4689999999999999999999999999999999999999888877766   4578999999999999999999999998


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKG  175 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKa  175 (270)
                       +++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|+|++  .|+||++||..+..+.++...|++||+
T Consensus        81 -g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asKa  157 (255)
T 4eso_A           81 -GAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE--GGSIVFTSSVADEGGHPGMSVYSASKA  157 (255)
T ss_dssp             -SSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCGGGSSBCTTBHHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc--CCEEEEECChhhcCCCCCchHHHHHHH
Confidence             89999999999988889999999999999999999999999999999865  479999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCCh----hhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCc
Q 024230          176 AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNG----KFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI  251 (270)
Q Consensus       176 al~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  251 (270)
                      |+++|+++++.|++++||+|++|+||+++|++........    ...+......|.++..+|+|+|++++||+++ ++++
T Consensus       158 a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~-~~~i  236 (255)
T 4eso_A          158 ALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFLAFE-ATFT  236 (255)
T ss_dssp             HHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHHT-CTTC
T ss_pred             HHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCCCCCcCHHHHHHHHHHHcCc-CcCc
Confidence            9999999999999999999999999999999875432222    2223345568999999999999999999998 8999


Q ss_pred             cCcEEeecCCcccccc
Q 024230          252 TGQTVCIDGGFTVNGF  267 (270)
Q Consensus       252 ~G~~i~vdgG~~~~~~  267 (270)
                      ||++|.+|||+....-
T Consensus       237 tG~~i~vdGG~~~~l~  252 (255)
T 4eso_A          237 TGAKLAVDGGLGQKLS  252 (255)
T ss_dssp             CSCEEEESTTTTTTBC
T ss_pred             cCCEEEECCCccccCc
Confidence            9999999999987643

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=7.1e-50  Score=340.02  Aligned_cols=244  Identities=26%  Similarity=0.364  Sum_probs=214.9

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEe-eCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTC-SRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      .|.++||++|||||++|||+++|++|+++|++|+++ .|+++..+++.+++...+.++.++.+|++|+++++++++++.+
T Consensus        22 ~m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  101 (267)
T 3u5t_A           22 SMMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEE  101 (267)
T ss_dssp             -----CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            366889999999999999999999999999999987 5666777888888888888999999999999999999999999


Q ss_pred             HcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhh
Q 024230           94 LFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                      .+ +++|+||||||.....++.+.+.++|++++++|+.+++.++++++|+|++  .|+||++||..+..+.++...|++|
T Consensus       102 ~~-g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~as  178 (267)
T 3u5t_A          102 AF-GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV--GGRIINMSTSQVGLLHPSYGIYAAA  178 (267)
T ss_dssp             HH-SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCTHHHHCCTTCHHHHHH
T ss_pred             Hc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCeEEEEeChhhccCCCCchHHHHH
Confidence            98 89999999999988889999999999999999999999999999999965  4899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccC
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG  253 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  253 (270)
                      |+|+++|+++++.|++++||+|++|+||+++|++..... .....+.+....|.+++.+|+|+|++++||+++.++++||
T Consensus       179 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG  257 (267)
T 3u5t_A          179 KAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGK-SDEVRDRFAKLAPLERLGTPQDIAGAVAFLAGPDGAWVNG  257 (267)
T ss_dssp             HHHHHHHHHHHHHHTTTSCCEEEEEEECCBC------------CHHHHHTSSTTCSCBCHHHHHHHHHHHHSTTTTTCCS
T ss_pred             HHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccC-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccC
Confidence            999999999999999999999999999999999875532 2344556677889999999999999999999999999999


Q ss_pred             cEEeecCCc
Q 024230          254 QTVCIDGGF  262 (270)
Q Consensus       254 ~~i~vdgG~  262 (270)
                      ++|.+|||+
T Consensus       258 ~~i~vdGG~  266 (267)
T 3u5t_A          258 QVLRANGGI  266 (267)
T ss_dssp             EEEEESSSC
T ss_pred             CEEEeCCCc
Confidence            999999997

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=1.6e-49  Score=342.15  Aligned_cols=250  Identities=19%  Similarity=0.218  Sum_probs=218.8

Q ss_pred             ccCCCCCCEEEEecCC--CcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Q 024230           14 NRWSLQGMTALVTGGT--KGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTV   91 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s--~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i   91 (270)
                      .+.+|+||++|||||+  +|||+++|++|+++|++|++++|+++..+...+ +.....++.++.+|++|+++++++++++
T Consensus        25 ~~~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  103 (293)
T 3grk_A           25 QSGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEP-LAEELGAFVAGHCDVADAASIDAVFETL  103 (293)
T ss_dssp             --CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHH-HHHHHTCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-HHHhcCCceEEECCCCCHHHHHHHHHHH
Confidence            3457999999999999  459999999999999999999999654444333 3333346889999999999999999999


Q ss_pred             HHHcCCcccEEEECCCCCC----CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCC
Q 024230           92 SSLFNGKLNIFVNNVGTSV----LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG  167 (270)
Q Consensus        92 ~~~~~~~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~  167 (270)
                      .+.+ +++|+||||||...    ..++.+.+.++|++.+++|+.+++.++++++|+|++  .|+||++||..+..+.++.
T Consensus       104 ~~~~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~  180 (293)
T 3grk_A          104 EKKW-GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD--GGSILTLTYYGAEKVMPNY  180 (293)
T ss_dssp             HHHT-SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT--CEEEEEEECGGGTSBCTTT
T ss_pred             HHhc-CCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC--CCEEEEEeehhhccCCCch
Confidence            9998 79999999999976    578889999999999999999999999999999975  6899999999999999999


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCC
Q 024230          168 TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA  247 (270)
Q Consensus       168 ~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (270)
                      ..|++||+|+++|+++++.|++++||+||+|+||+++|++...........+......|.+++.+|+|+|++++||+++.
T Consensus       181 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~  260 (293)
T 3grk_A          181 NVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIDEVGDVGLYFLSDL  260 (293)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcc
Confidence            99999999999999999999999999999999999999998776544555666777889999999999999999999999


Q ss_pred             CCCccCcEEeecCCcccccc
Q 024230          248 ASYITGQTVCIDGGFTVNGF  267 (270)
Q Consensus       248 ~~~~~G~~i~vdgG~~~~~~  267 (270)
                      ++++||++|.+|||+.+.++
T Consensus       261 ~~~itG~~i~vdGG~~~~~~  280 (293)
T 3grk_A          261 SRSVTGEVHHADSGYHVIGM  280 (293)
T ss_dssp             GTTCCSCEEEESTTGGGBCC
T ss_pred             ccCCcceEEEECCCcccCCC
Confidence            99999999999999998876

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=4.1e-50  Score=346.03  Aligned_cols=248  Identities=26%  Similarity=0.316  Sum_probs=222.9

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh--hHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTE--TELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      +++|+||++|||||++|||+++|++|+++|++|++++|+.  +..+++.+.++..+.++.++.+|++|+++++++++++.
T Consensus        44 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  123 (294)
T 3r3s_A           44 SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAR  123 (294)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999873  45666777777778889999999999999999999999


Q ss_pred             HHcCCcccEEEECCCCCC-CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhh
Q 024230           93 SLFNGKLNIFVNNVGTSV-LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYS  171 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~  171 (270)
                      +.+ +++|++|||||... ..++.+.+.++|++.+++|+.++++++++++|+|++  .|+||++||..++.+.++...|+
T Consensus       124 ~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~Y~  200 (294)
T 3r3s_A          124 EAL-GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK--GASIITTSSIQAYQPSPHLLDYA  200 (294)
T ss_dssp             HHH-TCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT--TCEEEEECCGGGTSCCTTCHHHH
T ss_pred             HHc-CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCEEEEECChhhccCCCCchHHH
Confidence            998 89999999999865 567889999999999999999999999999999854  48999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCc
Q 024230          172 ATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI  251 (270)
Q Consensus       172 ~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  251 (270)
                      +||+|+++|+++++.|++++||+|++|+||+++|++.............+....|.++..+|+|++++++||+++.++++
T Consensus       201 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~i  280 (294)
T 3r3s_A          201 ATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYV  280 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGSTTTTTTSTTSSCBCGGGGHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCC
Confidence            99999999999999999999999999999999998743332233444556667889999999999999999999999999


Q ss_pred             cCcEEeecCCcccc
Q 024230          252 TGQTVCIDGGFTVN  265 (270)
Q Consensus       252 ~G~~i~vdgG~~~~  265 (270)
                      ||++|.||||+++.
T Consensus       281 tG~~i~vdGG~~l~  294 (294)
T 3r3s_A          281 TAEVHGVCGGEHLG  294 (294)
T ss_dssp             CSCEEEESTTCCCC
T ss_pred             CCCEEEECCCccCc
Confidence            99999999999863

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=2.8e-49  Score=334.99  Aligned_cols=252  Identities=52%  Similarity=0.885  Sum_probs=228.4

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .|+++||++|||||++|||+++|++|+++|++|++++|+++.+++..+++...+.++.++.+|++|+++++++++++.+.
T Consensus         4 ~~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (260)
T 2ae2_A            4 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH   83 (260)
T ss_dssp             TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            36789999999999999999999999999999999999999888888888777778999999999999999999999998


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                      +++++|++|||||.....++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+..+.++...|++||
T Consensus        84 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  163 (260)
T 2ae2_A           84 FHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATK  163 (260)
T ss_dssp             TTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             cCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCcchHHHHH
Confidence            75689999999999877888899999999999999999999999999999988889999999999999989999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHH---HHhhcCCCCCCCChHhHHHHHHHHhCCCCCCc
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVD---EVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI  251 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  251 (270)
                      +++++|+++++.|++++||+|++|+||+++|++.......+...+   .+....|.+++.+|+|+|++++||+++.++++
T Consensus       164 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~~  243 (260)
T 2ae2_A          164 GAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYV  243 (260)
T ss_dssp             HHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCC
Confidence            999999999999999999999999999999998654433322222   44556788899999999999999999988999


Q ss_pred             cCcEEeecCCccccc
Q 024230          252 TGQTVCIDGGFTVNG  266 (270)
Q Consensus       252 ~G~~i~vdgG~~~~~  266 (270)
                      +|+++.+|||+.+..
T Consensus       244 tG~~~~vdgG~~~~~  258 (260)
T 2ae2_A          244 TGQIIYVDGGLMANC  258 (260)
T ss_dssp             CSCEEEESTTGGGCS
T ss_pred             CCCEEEECCCccccc
Confidence            999999999987643

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=5.1e-49  Score=334.32  Aligned_cols=248  Identities=28%  Similarity=0.396  Sum_probs=218.6

Q ss_pred             ccCCCCCCEEEEecCC-CcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcC-CeEEEEEccCCCHHHHHHHHHHH
Q 024230           14 NRWSLQGMTALVTGGT-KGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG-LKVTGSVCDVSSRPQRQTLINTV   91 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s-~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~i   91 (270)
                      .+++++||++|||||+ +|||+++|++|+++|++|++++|+.+.+++..+++.+.+ .++.++.+|++|+++++++++++
T Consensus        16 ~~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   95 (266)
T 3o38_A           16 GHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQT   95 (266)
T ss_dssp             CCSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHH
Confidence            3568999999999998 599999999999999999999999999999888886654 68999999999999999999999


Q ss_pred             HHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEecCccccccCCCChhh
Q 024230           92 SSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRAS-GAASIVLMSSALGIVSANVGTVY  170 (270)
Q Consensus        92 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~ii~iss~~~~~~~~~~~~y  170 (270)
                      .+.+ +++|+||||||.....++.+.+.++|++++++|+.+++.++++++|+|+++ +.++||++||..+..+.++...|
T Consensus        96 ~~~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y  174 (266)
T 3o38_A           96 VEKA-GRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHY  174 (266)
T ss_dssp             HHHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTCHHH
T ss_pred             HHHh-CCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCCchH
Confidence            9998 799999999999888888999999999999999999999999999999887 67899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCC
Q 024230          171 SATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY  250 (270)
Q Consensus       171 ~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  250 (270)
                      ++||+|+++|+++++.|++++||+|++|+||+++|++...... ....+.+....+.++..+|+|++++++||+++.+++
T Consensus       175 ~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~r~~~~~dva~~i~~l~s~~~~~  253 (266)
T 3o38_A          175 AAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSS-SELLDRLASDEAFGRAAEPWEVAATIAFLASDYSSY  253 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------------------CCTTSSCCCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCc-HHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCccccC
Confidence            9999999999999999999999999999999999998766532 344455666778899999999999999999999999


Q ss_pred             ccCcEEeecCCcc
Q 024230          251 ITGQTVCIDGGFT  263 (270)
Q Consensus       251 ~~G~~i~vdgG~~  263 (270)
                      +||++|.+|||++
T Consensus       254 ~tG~~i~vdgG~~  266 (266)
T 3o38_A          254 MTGEVVSVSSQRA  266 (266)
T ss_dssp             CCSCEEEESSCCC
T ss_pred             ccCCEEEEcCCcC
Confidence            9999999999984

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-49  Score=337.83  Aligned_cols=250  Identities=29%  Similarity=0.397  Sum_probs=224.2

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK--GLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      .++++||++|||||++|||+++|++|+++|++|++++|+++.+++..+++...  +.++.++.+|++|+++++++++++.
T Consensus         8 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   87 (267)
T 1iy8_A            8 TTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATT   87 (267)
T ss_dssp             --CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            35689999999999999999999999999999999999999888888777665  6789999999999999999999999


Q ss_pred             HHcCCcccEEEECCCCCCC-CCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhh
Q 024230           93 SLFNGKLNIFVNNVGTSVL-KPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYS  171 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~  171 (270)
                      +.+ +++|+||||||.... .++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.++...|+
T Consensus        88 ~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  166 (267)
T 1iy8_A           88 ERF-GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYA  166 (267)
T ss_dssp             HHH-SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHH
T ss_pred             HHc-CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCCCccHH
Confidence            998 899999999998766 788899999999999999999999999999999988789999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccc--cCChhhHH----HHhhcCCCCCCCChHhHHHHHHHHhC
Q 024230          172 ATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPL--LGNGKFVD----EVKSRTPMGRLGEPKEVSSLVAFLCM  245 (270)
Q Consensus       172 ~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~--~~~~~~~~----~~~~~~~~~~~~~~~dva~~~~~l~s  245 (270)
                      +||+++++|+++++.|++++||+|++|+||+++|++....  ...+...+    .+....|.+++.+|+|++++++||++
T Consensus       167 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s  246 (267)
T 1iy8_A          167 AAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLS  246 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCCCCCCcCHHHHHHHHHHHcC
Confidence            9999999999999999999999999999999999986542  10112222    45556788899999999999999999


Q ss_pred             CCCCCccCcEEeecCCcccc
Q 024230          246 PAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       246 ~~~~~~~G~~i~vdgG~~~~  265 (270)
                      +.+++++|+++.+|||+.+.
T Consensus       247 ~~~~~~tG~~i~vdGG~~~~  266 (267)
T 1iy8_A          247 DDASYVNATVVPIDGGQSAA  266 (267)
T ss_dssp             GGGTTCCSCEEEESTTTTTB
T ss_pred             ccccCCCCCEEEECCCcccC
Confidence            98899999999999998765

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=2.2e-49  Score=336.61  Aligned_cols=260  Identities=28%  Similarity=0.461  Sum_probs=234.0

Q ss_pred             CCCCCCcccccccccCCCCCCEEEEecCC--CcHHHHHHHHHHHCCCeEEEeeCChhHH-HHHHHHHHh-cCCeEEEEEc
Q 024230            1 MAQPQQTESHSRQNRWSLQGMTALVTGGT--KGLGLAVVEELSMLGATVHTCSRTETEL-NECIHHLQM-KGLKVTGSVC   76 (270)
Q Consensus         1 ~~~~~~~~~~~~~~~~~l~gk~vlItG~s--~giG~~la~~l~~~G~~v~l~~r~~~~~-~~~~~~~~~-~~~~~~~~~~   76 (270)
                      |+.+..+..+.....++++||+++||||+  +|||+++|++|+++|++|++++|+.+.. ++..+++.. .+.++.++.+
T Consensus         1 m~~~~~~~~~~~~~~~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~   80 (267)
T 3gdg_A            1 MPGQQATKHESLLDQLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKC   80 (267)
T ss_dssp             CCCCCCCSCSSHHHHHCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBC
T ss_pred             CCcccCCCCcccccccCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEec
Confidence            67776666666666789999999999999  9999999999999999999999887654 555566653 3778999999


Q ss_pred             cCCCHHHHHHHHHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEec
Q 024230           77 DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMS  156 (270)
Q Consensus        77 D~~~~~~~~~~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~is  156 (270)
                      |++|+++++++++++.+.+ +++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++|
T Consensus        81 Dl~~~~~v~~~~~~~~~~~-g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~is  159 (267)
T 3gdg_A           81 QVDSYESCEKLVKDVVADF-GQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITA  159 (267)
T ss_dssp             CTTCHHHHHHHHHHHHHHT-SCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred             CCCCHHHHHHHHHHHHHHc-CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEc
Confidence            9999999999999999998 899999999999888889999999999999999999999999999999988889999999


Q ss_pred             CccccccC--CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChH
Q 024230          157 SALGIVSA--NVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPK  234 (270)
Q Consensus       157 s~~~~~~~--~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (270)
                      |..+..+.  ++...|++||+++++|+++++.|+++. |+|++|+||+++|++....  .+...+......|.++..+|+
T Consensus       160 S~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~-i~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~r~~~~~  236 (267)
T 3gdg_A          160 SMSGHIANFPQEQTSYNVAKAGCIHMARSLANEWRDF-ARVNSISPGYIDTGLSDFV--PKETQQLWHSMIPMGRDGLAK  236 (267)
T ss_dssp             CGGGTSCCSSSCCHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEEECCEECSCGGGS--CHHHHHHHHTTSTTSSCEETH
T ss_pred             cccccccCCCCCCCcchHHHHHHHHHHHHHHHHhccC-cEEEEEECCccccchhhhC--CHHHHHHHHhcCCCCCCcCHH
Confidence            99988775  577899999999999999999999987 9999999999999988654  345556667788999999999


Q ss_pred             hHHHHHHHHhCCCCCCccCcEEeecCCccc
Q 024230          235 EVSSLVAFLCMPAASYITGQTVCIDGGFTV  264 (270)
Q Consensus       235 dva~~~~~l~s~~~~~~~G~~i~vdgG~~~  264 (270)
                      |++++++||+++.++++||++|.+|||+++
T Consensus       237 dva~~~~~l~s~~~~~itG~~i~vdgG~~~  266 (267)
T 3gdg_A          237 ELKGAYVYFASDASTYTTGADLLIDGGYTT  266 (267)
T ss_dssp             HHHHHHHHHHSTTCTTCCSCEEEESTTGGG
T ss_pred             HHHhHhheeecCccccccCCEEEECCceec
Confidence            999999999999999999999999999976

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=2.7e-49  Score=337.11  Aligned_cols=249  Identities=33%  Similarity=0.449  Sum_probs=221.7

Q ss_pred             cccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeC-ChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Q 024230           13 QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSR-TETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTV   91 (270)
Q Consensus        13 ~~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i   91 (270)
                      .+.|+++||+||||||++|||+++|++|+++|++|++++| +++..+.+.++++..+.++.++.+|++++++++++++++
T Consensus        22 ~~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~  101 (271)
T 4iin_A           22 SNAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTI  101 (271)
T ss_dssp             --CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             hhhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHH
Confidence            3468899999999999999999999999999999999999 455566777778777889999999999999999999999


Q ss_pred             HHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhh
Q 024230           92 SSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYS  171 (270)
Q Consensus        92 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~  171 (270)
                      .+.+ +++|++|||||.....++.+.+.++|++.+++|+.+++.+++.++|+|++++.|+||++||..+..+.++...|+
T Consensus       102 ~~~~-g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  180 (271)
T 4iin_A          102 VQSD-GGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYS  180 (271)
T ss_dssp             HHHH-SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHH
T ss_pred             HHhc-CCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCCchHhH
Confidence            9988 799999999999888888899999999999999999999999999999998889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCc
Q 024230          172 ATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI  251 (270)
Q Consensus       172 ~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  251 (270)
                      +||+|+++|+++++.|++++||+|++|+||+++|++.....  +..........|.++..+|+|++++++||+++.+.++
T Consensus       181 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~~~~~p~dvA~~i~~l~s~~~~~i  258 (271)
T 4iin_A          181 ASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLK--DELKADYVKNIPLNRLGSAKEVAEAVAFLLSDHSSYI  258 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC--------------CGGGCTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhc--HHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCCCcCCC
Confidence            99999999999999999999999999999999999987653  2333445567788999999999999999999999999


Q ss_pred             cCcEEeecCCccc
Q 024230          252 TGQTVCIDGGFTV  264 (270)
Q Consensus       252 ~G~~i~vdgG~~~  264 (270)
                      ||+++.+|||+.+
T Consensus       259 tG~~i~vdGG~~~  271 (271)
T 4iin_A          259 TGETLKVNGGLYM  271 (271)
T ss_dssp             CSCEEEESTTSCC
T ss_pred             cCCEEEeCCCeeC
Confidence            9999999999874

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=5.2e-49  Score=330.74  Aligned_cols=244  Identities=28%  Similarity=0.452  Sum_probs=223.8

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeC-ChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSR-TETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      +|+||+++||||++|||+++|++|+++|++|++++| +++.+++..++++..+.++.++.+|++|+++++++++++.+.+
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (246)
T 2uvd_A            1 MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVF   80 (246)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            368999999999999999999999999999999999 8888888888887777789999999999999999999999998


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKG  175 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKa  175 (270)
                       +++|++|||||.....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.++...|++||+
T Consensus        81 -g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  159 (246)
T 2uvd_A           81 -GQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKA  159 (246)
T ss_dssp             -SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTBHHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCCchHHHHHH
Confidence             7999999999998878888999999999999999999999999999998887899999999999988899999999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcE
Q 024230          176 AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT  255 (270)
Q Consensus       176 al~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  255 (270)
                      ++++|+++++.|++++||+|++|+||+++|++.....  ......+....|.+++.+|+|+++.++||+++.+++++|++
T Consensus       160 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~  237 (246)
T 2uvd_A          160 GVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLD--ENIKAEMLKLIPAAQFGEAQDIANAVTFFASDQSKYITGQT  237 (246)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCC--TTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcC--HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCE
Confidence            9999999999999999999999999999999876542  23334455567888999999999999999999889999999


Q ss_pred             EeecCCcc
Q 024230          256 VCIDGGFT  263 (270)
Q Consensus       256 i~vdgG~~  263 (270)
                      +.+|||+.
T Consensus       238 ~~vdgG~~  245 (246)
T 2uvd_A          238 LNVDGGMV  245 (246)
T ss_dssp             EEESTTSC
T ss_pred             EEECcCcc
Confidence            99999975

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=9.9e-50  Score=337.69  Aligned_cols=248  Identities=24%  Similarity=0.339  Sum_probs=209.8

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEe-eCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTC-SRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      +++|+||++|||||++|||+++|++|+++|++|+++ .|+.+..++..+++...+.++.++.+|++|+++++++++++.+
T Consensus         3 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (259)
T 3edm_A            3 LQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAAD   82 (259)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            367999999999999999999999999999999998 6677777888888887788899999999999999999999999


Q ss_pred             HcCCcccEEEECCCCC-CCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccc-ccCCCChhhh
Q 024230           94 LFNGKLNIFVNNVGTS-VLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGI-VSANVGTVYS  171 (270)
Q Consensus        94 ~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~-~~~~~~~~y~  171 (270)
                      .+ +++|++|||||.. ...++.+.+.++|++++++|+.+++.++++++|+|++  .|+||++||..+. .+.++...|+
T Consensus        83 ~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y~  159 (259)
T 3edm_A           83 KF-GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK--GGAIVTFSSQAGRDGGGPGALAYA  159 (259)
T ss_dssp             HH-CSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHCCSTTCHHHH
T ss_pred             Hh-CCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCEEEEEcCHHhccCCCCCcHHHH
Confidence            99 8999999999987 6778889999999999999999999999999999966  5899999999998 6788899999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCc
Q 024230          172 ATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI  251 (270)
Q Consensus       172 ~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  251 (270)
                      +||+|+++|+++++.|+++. |+||+|+||+++|+|...+.. +...+.+....|.++..+|+|++++++||+++.++++
T Consensus       160 asKaa~~~l~~~la~e~~~~-I~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~~~~i  237 (259)
T 3edm_A          160 TSKGAVMTFTRGLAKEVGPK-IRVNAVCPGMISTTFHDTFTK-PEVRERVAGATSLKREGSSEDVAGLVAFLASDDAAYV  237 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHTTT-CEEEEEEECCBCC-----------------------CCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCcCcccccccC-hHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCc
Confidence            99999999999999999987 999999999999999876542 3344455667788999999999999999999999999


Q ss_pred             cCcEEeecCCcccccc
Q 024230          252 TGQTVCIDGGFTVNGF  267 (270)
Q Consensus       252 ~G~~i~vdgG~~~~~~  267 (270)
                      ||++|.+|||+..+..
T Consensus       238 tG~~i~vdGg~~~~~~  253 (259)
T 3edm_A          238 TGACYDINGGVLFSEG  253 (259)
T ss_dssp             CSCEEEESBCSSBC--
T ss_pred             cCCEEEECCCcCCCCC
Confidence            9999999999987654

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=1.8e-49  Score=341.61  Aligned_cols=248  Identities=30%  Similarity=0.416  Sum_probs=223.4

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhH-HHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETE-LNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      ..+|+||++|||||++|||+++|++|+++|++|++++|+.+. .+...+.+...+.++.++.+|++|+++++++++++.+
T Consensus        42 ~~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  121 (291)
T 3ijr_A           42 SEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVR  121 (291)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999998764 4455566666678899999999999999999999999


Q ss_pred             HcCCcccEEEECCCCCC-CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhh
Q 024230           94 LFNGKLNIFVNNVGTSV-LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSA  172 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~  172 (270)
                      .+ +++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++  .|+||++||..++.+.++...|++
T Consensus       122 ~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~a  198 (291)
T 3ijr_A          122 QL-GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ--GDVIINTASIVAYEGNETLIDYSA  198 (291)
T ss_dssp             HH-SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT--TCEEEEECCTHHHHCCTTCHHHHH
T ss_pred             Hc-CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCEEEEEechHhcCCCCCChhHHH
Confidence            98 89999999999864 467888999999999999999999999999999854  579999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCcc
Q 024230          173 TKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT  252 (270)
Q Consensus       173 sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  252 (270)
                      ||+++++|+++++.|++++||+|++|+||+++|++..... .......+....|.++..+|+|++++++||+++.++++|
T Consensus       199 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~it  277 (291)
T 3ijr_A          199 TKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSF-DEKKVSQFGSNVPMQRPGQPYELAPAYVYLASSDSSYVT  277 (291)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHS-CHHHHHHTTTTSTTSSCBCGGGTHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccC-CHHHHHHHHccCCCCCCcCHHHHHHHHHHHhCCccCCCc
Confidence            9999999999999999999999999999999999865432 234445566778899999999999999999999999999


Q ss_pred             CcEEeecCCccccc
Q 024230          253 GQTVCIDGGFTVNG  266 (270)
Q Consensus       253 G~~i~vdgG~~~~~  266 (270)
                      |++|.+|||+.++|
T Consensus       278 G~~i~vdGG~~~~g  291 (291)
T 3ijr_A          278 GQMIHVNGGVIVNG  291 (291)
T ss_dssp             SCEEEESSSCCCCC
T ss_pred             CCEEEECCCcccCC
Confidence            99999999999875

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=4.3e-49  Score=333.83  Aligned_cols=248  Identities=27%  Similarity=0.431  Sum_probs=209.6

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      +|++++|++|||||++|||+++|++|+++|++|++++|+++.+++..+++   +.++.++.+|++|+++++++++++.+.
T Consensus         4 ~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (261)
T 3n74_A            4 SMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI---GDAALAVAADISKEADVDAAVEAALSK   80 (261)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHh
Confidence            47899999999999999999999999999999999999999888877655   567899999999999999999999999


Q ss_pred             cCCcccEEEECCCCCC-CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC----CcEEEEecCccccccCCCChh
Q 024230           95 FNGKLNIFVNNVGTSV-LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG----AASIVLMSSALGIVSANVGTV  169 (270)
Q Consensus        95 ~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~----~g~ii~iss~~~~~~~~~~~~  169 (270)
                      + +++|++|||||... ..++.+.+.++|++++++|+.++++++++++|+|.+++    .++||++||..+..+.+....
T Consensus        81 ~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~  159 (261)
T 3n74_A           81 F-GKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAW  159 (261)
T ss_dssp             H-SCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTCHH
T ss_pred             c-CCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCccH
Confidence            8 79999999999876 56777889999999999999999999999999998764    578999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC--ChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCC
Q 024230          170 YSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG--NGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA  247 (270)
Q Consensus       170 y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (270)
                      |++||+|+++|+++++.|++++||+|++|+||+++|++...+..  .+...+.+....|.+++.+|+|++++++||+++.
T Consensus       160 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  239 (261)
T 3n74_A          160 YNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCSPQ  239 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------CTTSSCCCHHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCcCCCcCHHHHHHHHHHHcCCc
Confidence            99999999999999999999999999999999999999876643  2334455667788999999999999999999999


Q ss_pred             CCCccCcEEeecCCccccc
Q 024230          248 ASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       248 ~~~~~G~~i~vdgG~~~~~  266 (270)
                      ++++||++|.+|||+++.+
T Consensus       240 ~~~itG~~i~vdgG~~~~~  258 (261)
T 3n74_A          240 ASMITGVALDVDGGRSIGG  258 (261)
T ss_dssp             GTTCCSCEEEESTTTTC--
T ss_pred             ccCcCCcEEEecCCcccCC
Confidence            9999999999999999865

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=2.8e-50  Score=341.59  Aligned_cols=249  Identities=21%  Similarity=0.309  Sum_probs=213.4

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCC---hhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRT---ETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINT   90 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~---~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   90 (270)
                      ..++++||++|||||++|||+++|++|+++|++|++++|.   .+.++++.+++...+.++.++.+|++|++++++++++
T Consensus         5 ~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   84 (262)
T 3ksu_A            5 KYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDF   84 (262)
T ss_dssp             CCSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            3578999999999999999999999999999999998764   4566777788877788999999999999999999999


Q ss_pred             HHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhh
Q 024230           91 VSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVY  170 (270)
Q Consensus        91 i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y  170 (270)
                      +.+.+ +++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|+|+  +.|+||++||..+..+.++...|
T Consensus        85 ~~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~--~~g~iv~isS~~~~~~~~~~~~Y  161 (262)
T 3ksu_A           85 AEKEF-GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMN--PNGHIITIATSLLAAYTGFYSTY  161 (262)
T ss_dssp             HHHHH-CSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEE--EEEEEEEECCCHHHHHHCCCCC-
T ss_pred             HHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhc--CCCEEEEEechhhccCCCCCchh
Confidence            99998 8999999999998888999999999999999999999999999999993  35899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCC
Q 024230          171 SATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY  250 (270)
Q Consensus       171 ~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  250 (270)
                      ++||+|+++|+++++.|++++||+||+|+||+++|++...... ....+......+.+++.+|+|+|++++||+++ +++
T Consensus       162 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~-~~~  239 (262)
T 3ksu_A          162 AGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQET-KESTAFHKSQAMGNQLTKIEDIAPIIKFLTTD-GWW  239 (262)
T ss_dssp             ----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC-------------CCCCSCCGGGTHHHHHHHHTT-TTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCc-hHHHHHHHhcCcccCCCCHHHHHHHHHHHcCC-CCC
Confidence            9999999999999999999999999999999999998755322 22334455667889999999999999999999 999


Q ss_pred             ccCcEEeecCCcccccc
Q 024230          251 ITGQTVCIDGGFTVNGF  267 (270)
Q Consensus       251 ~~G~~i~vdgG~~~~~~  267 (270)
                      +||++|.+|||+..+.-
T Consensus       240 itG~~i~vdGg~~~~~~  256 (262)
T 3ksu_A          240 INGQTIFANGGYTTREG  256 (262)
T ss_dssp             CCSCEEEESTTCCCC--
T ss_pred             ccCCEEEECCCccCCCc
Confidence            99999999999988764

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=2.5e-49  Score=335.71  Aligned_cols=245  Identities=28%  Similarity=0.451  Sum_probs=223.8

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      .+++||+++||||++|||+++|++|+++|++|++++|+++.+++..+++...+.++.++.+|++|+++++++++++.+.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (262)
T 1zem_A            3 KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF   82 (262)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence            36889999999999999999999999999999999999998888888887777789999999999999999999999998


Q ss_pred             CCcccEEEECCCCC-CCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           96 NGKLNIFVNNVGTS-VLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        96 ~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                       +++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++||
T Consensus        83 -g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  161 (262)
T 1zem_A           83 -GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSK  161 (262)
T ss_dssp             -SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCCchHHHHH
Confidence             7999999999987 67788899999999999999999999999999999988789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccc------------cC-Chh-hHHHHhhcCCCCCCCChHhHHHHH
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPL------------LG-NGK-FVDEVKSRTPMGRLGEPKEVSSLV  240 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~------------~~-~~~-~~~~~~~~~~~~~~~~~~dva~~~  240 (270)
                      +++++|+++++.|++++||+|++|+||+++|+|....            .. .+. ..+.+....|.+++.+|+|+|+++
T Consensus       162 ~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v  241 (262)
T 1zem_A          162 GAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVV  241 (262)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHH
T ss_pred             HHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            9999999999999999999999999999999986542            11 222 334455667889999999999999


Q ss_pred             HHHhCCCCCCccCcEEeecCC
Q 024230          241 AFLCMPAASYITGQTVCIDGG  261 (270)
Q Consensus       241 ~~l~s~~~~~~~G~~i~vdgG  261 (270)
                      +||+++.++++||+++.+|||
T Consensus       242 ~~l~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          242 AFLLGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             HHHHSGGGTTCCSCEEEESCC
T ss_pred             HHHcCchhcCcCCcEEecCCC
Confidence            999999999999999999998

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=9.9e-50  Score=339.12  Aligned_cols=247  Identities=28%  Similarity=0.371  Sum_probs=219.5

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK--GLKVTGSVCDVSSRPQRQTLINTV   91 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~i   91 (270)
                      +.|+|+||++|||||++|||+++|++|+++|++|++++|+++.+++..+++...  +..+.++.+|+++++++++++++ 
T Consensus         4 m~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~-   82 (267)
T 3t4x_A            4 MHMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEK-   82 (267)
T ss_dssp             CCCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHH-
T ss_pred             cccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHh-
Confidence            457899999999999999999999999999999999999999998888888765  46788999999999998877653 


Q ss_pred             HHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhh
Q 024230           92 SSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYS  171 (270)
Q Consensus        92 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~  171 (270)
                         + +++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|+|.+++.|+||++||..++.+.++...|+
T Consensus        83 ---~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  158 (267)
T 3t4x_A           83 ---Y-PKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYS  158 (267)
T ss_dssp             ---C-CCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTTCHHHH
T ss_pred             ---c-CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCcchHHH
Confidence               5 799999999999888889999999999999999999999999999999988889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC---------ChhhHH----HHhhcCCCCCCCChHhHHH
Q 024230          172 ATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG---------NGKFVD----EVKSRTPMGRLGEPKEVSS  238 (270)
Q Consensus       172 ~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~---------~~~~~~----~~~~~~~~~~~~~~~dva~  238 (270)
                      +||+|+++|+++++.|++++||+||+|+||+++|++...+..         .....+    ......|.+++.+|+|+++
T Consensus       159 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~  238 (267)
T 3t4x_A          159 ATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIAH  238 (267)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCHHHHHH
Confidence            999999999999999999999999999999999986543211         011111    1223356899999999999


Q ss_pred             HHHHHhCCCCCCccCcEEeecCCcccc
Q 024230          239 LVAFLCMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       239 ~~~~l~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                      +++||+++.++++||++|.+|||+...
T Consensus       239 ~v~fL~s~~~~~itG~~i~vdGG~~~s  265 (267)
T 3t4x_A          239 LVTFLSSPLSSAINGSALRIDGGLVRS  265 (267)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTCSCS
T ss_pred             HHHHHcCccccCccCCeEEECCCcccc
Confidence            999999999999999999999998765

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=2e-49  Score=335.30  Aligned_cols=243  Identities=25%  Similarity=0.348  Sum_probs=201.9

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      +|+++||++|||||++|||+++|++|+++|++|++++|+++..++..+++   +.++.++.+|++|+++++++++++.+.
T Consensus         2 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~   78 (257)
T 3tpc_A            2 VMQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL---GAAVRFRNADVTNEADATAALAFAKQE   78 (257)
T ss_dssp             --CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC---------------CEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999998877766655   457889999999999999999999999


Q ss_pred             cCCcccEEEECCCCCCCCCCC----CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc------CCcEEEEecCccccccC
Q 024230           95 FNGKLNIFVNNVGTSVLKPTL----EYNAEDFSLVMSTNFESAFHLCQLAHPLLRAS------GAASIVLMSSALGIVSA  164 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~------~~g~ii~iss~~~~~~~  164 (270)
                      + +++|+||||||.....++.    +.+.++|++++++|+.+++.++++++|+|+++      +.|+||++||..+..+.
T Consensus        79 ~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~  157 (257)
T 3tpc_A           79 F-GHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQ  157 (257)
T ss_dssp             H-SCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC
T ss_pred             c-CCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCC
Confidence            8 8999999999987655543    68899999999999999999999999999874      57899999999999999


Q ss_pred             CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCC-CCCCChHhHHHHHHHH
Q 024230          165 NVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPM-GRLGEPKEVSSLVAFL  243 (270)
Q Consensus       165 ~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l  243 (270)
                      ++...|++||+|+++|+++++.|++++||+|++|+||+++|++.....  +...+.+....|. +++.+|+|++++++||
T Consensus       158 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~--~~~~~~~~~~~p~~~r~~~~~dva~~v~~l  235 (257)
T 3tpc_A          158 IGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMP--QDVQDALAASVPFPPRLGRAEEYAALVKHI  235 (257)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC----------------CCSSSSCSCBCHHHHHHHHHHH
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCC--HHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999886652  2334445566777 8999999999999999


Q ss_pred             hCCCCCCccCcEEeecCCcccc
Q 024230          244 CMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       244 ~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                      +++  +++||++|.+|||+++.
T Consensus       236 ~s~--~~itG~~i~vdGG~~~~  255 (257)
T 3tpc_A          236 CEN--TMLNGEVIRLDGALRMA  255 (257)
T ss_dssp             HHC--TTCCSCEEEESTTCCC-
T ss_pred             ccc--CCcCCcEEEECCCccCC
Confidence            975  79999999999999864

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=5.4e-49  Score=342.44  Aligned_cols=249  Identities=29%  Similarity=0.421  Sum_probs=220.3

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCC------------hhHHHHHHHHHHhcCCeEEEEEccCCCHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRT------------ETELNECIHHLQMKGLKVTGSVCDVSSRP   82 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~------------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   82 (270)
                      +.+|+||++|||||++|||+++|++|+++|++|++++|+            .+.+++..+++...+.++.++.+|++|++
T Consensus        41 m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~  120 (317)
T 3oec_A           41 MNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLA  120 (317)
T ss_dssp             -CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence            457999999999999999999999999999999999886            67777778888888889999999999999


Q ss_pred             HHHHHHHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCcccc
Q 024230           83 QRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGI  161 (270)
Q Consensus        83 ~~~~~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~~~  161 (270)
                      +++++++++.+.+ +++|+||||||.....++.+.+.++|++++++|+.+++.++++++|+|.+++ .|+||++||..+.
T Consensus       121 ~v~~~~~~~~~~~-g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~  199 (317)
T 3oec_A          121 SLQAVVDEALAEF-GHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGL  199 (317)
T ss_dssp             HHHHHHHHHHHHH-SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGS
T ss_pred             HHHHHHHHHHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhc
Confidence            9999999999998 8999999999998888999999999999999999999999999999998765 6899999999999


Q ss_pred             ccCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccc------c---CC--hhh-HHHHh--hcCCC
Q 024230          162 VSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPL------L---GN--GKF-VDEVK--SRTPM  227 (270)
Q Consensus       162 ~~~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~------~---~~--~~~-~~~~~--~~~~~  227 (270)
                      .+.++...|++||+|+++|+++++.|++++||+||+|+||+++|++....      .   ..  ... .+.+.  ...| 
T Consensus       200 ~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-  278 (317)
T 3oec_A          200 RGAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLP-  278 (317)
T ss_dssp             SCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHHTTTCSSS-
T ss_pred             CCCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHHHHhhhccCC-
Confidence            99999999999999999999999999999999999999999999875321      0   01  111 11111  1223 


Q ss_pred             CCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCcccc
Q 024230          228 GRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       228 ~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                      +++.+|+|++++++||+++.++++||++|.||||+.+.
T Consensus       279 ~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~~~  316 (317)
T 3oec_A          279 IPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQLAR  316 (317)
T ss_dssp             SSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGC
T ss_pred             CCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcchhhc
Confidence            67789999999999999999999999999999999764

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=9e-49  Score=337.20  Aligned_cols=246  Identities=26%  Similarity=0.320  Sum_probs=221.4

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEee-CChhHHHHHHHHHH-hcCCeEEEEEccCCCHH----------
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCS-RTETELNECIHHLQ-MKGLKVTGSVCDVSSRP----------   82 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~-r~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~----------   82 (270)
                      +++|++|++|||||++|||+++|++|+++|++|++++ |+++.+++..+++. ..+.++.++.+|+++++          
T Consensus         4 m~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   83 (291)
T 1e7w_A            4 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGS   83 (291)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----C
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccc
Confidence            4678999999999999999999999999999999999 99998888888886 55678999999999999          


Q ss_pred             -------HHHHHHHHHHHHcCCcccEEEECCCCCCCCCCCCCC--------------HHHHHHHHHHhhHHHHHHHHHHH
Q 024230           83 -------QRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYN--------------AEDFSLVMSTNFESAFHLCQLAH  141 (270)
Q Consensus        83 -------~~~~~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~~~  141 (270)
                             +++++++++.+.+ +++|+||||||.....++.+.+              .++|++++++|+.+++.++++++
T Consensus        84 ~~~~~~~~v~~~~~~~~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  162 (291)
T 1e7w_A           84 APVTLFTRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFA  162 (291)
T ss_dssp             CCBCHHHHHHHHHHHHHHHH-SCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             cccchHHHHHHHHHHHHHhc-CCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHH
Confidence                   9999999999998 8999999999998777888888              99999999999999999999999


Q ss_pred             HHHHhcC------CcEEEEecCccccccCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCCh
Q 024230          142 PLLRASG------AASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNG  215 (270)
Q Consensus       142 ~~m~~~~------~g~ii~iss~~~~~~~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~  215 (270)
                      |+|.+++      .|+||++||..+..+.++...|++||+++++|+++++.|++++||+|++|+||+++|+| . +  .+
T Consensus       163 ~~m~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~-~--~~  238 (291)
T 1e7w_A          163 HRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D-M--PP  238 (291)
T ss_dssp             HHHHTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G-S--CH
T ss_pred             HHHHhcCCCCCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c-C--CH
Confidence            9998876      68999999999999999999999999999999999999999999999999999999998 4 3  23


Q ss_pred             hhHHHHhhcCCCC-CCCChHhHHHHHHHHhCCCCCCccCcEEeecCCcccc
Q 024230          216 KFVDEVKSRTPMG-RLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       216 ~~~~~~~~~~~~~-~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                      ...+.+....|.+ +..+|+|+++.++||+++.++++||+++.+|||+.+.
T Consensus       239 ~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~  289 (291)
T 1e7w_A          239 AVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  289 (291)
T ss_dssp             HHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCcccc
Confidence            4445555667888 8999999999999999998999999999999999764

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=5.8e-49  Score=332.69  Aligned_cols=246  Identities=29%  Similarity=0.408  Sum_probs=222.5

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhH--HHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETE--LNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      ++|+++||||++|||+++|++|+++|++|++++|+++.  +++..++++..+.++.++.+|++|+++++++++++.+.+ 
T Consensus         1 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   79 (258)
T 3a28_C            1 MSKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKL-   79 (258)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh-
Confidence            37999999999999999999999999999999999887  777778887767789999999999999999999999998 


Q ss_pred             CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-cEEEEecCccccccCCCChhhhhhHH
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGA-ASIVLMSSALGIVSANVGTVYSATKG  175 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~-g~ii~iss~~~~~~~~~~~~y~~sKa  175 (270)
                      +++|+||||||.....++.+.+.++|++++++|+.+++.++++++|+|++++. |+||++||..+..+.++...|++||+
T Consensus        80 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  159 (258)
T 3a28_C           80 GGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKF  159 (258)
T ss_dssp             TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCchhHHHHHH
Confidence            79999999999987788889999999999999999999999999999988776 89999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEecCcccCCCCcccc-------CC--hhhHHHHhhcCCCCCCCChHhHHHHHHHHhCC
Q 024230          176 AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLL-------GN--GKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP  246 (270)
Q Consensus       176 al~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~-------~~--~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (270)
                      ++++|+++++.|++++||+|++|+||+++|+|.....       ..  ....+.+....|.+++.+|+|++++++||+++
T Consensus       160 a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~  239 (258)
T 3a28_C          160 AVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFLASE  239 (258)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCc
Confidence            9999999999999999999999999999999865421       11  23334455567888999999999999999999


Q ss_pred             CCCCccCcEEeecCCcccc
Q 024230          247 AASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       247 ~~~~~~G~~i~vdgG~~~~  265 (270)
                      .+++++|+++.+|||+.++
T Consensus       240 ~~~~~tG~~i~vdGG~~~~  258 (258)
T 3a28_C          240 NSNYVTGQVMLVDGGMLYN  258 (258)
T ss_dssp             GGTTCCSCEEEESSSSCCC
T ss_pred             ccCCCCCCEEEECCCEecC
Confidence            8999999999999998753

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=8.5e-49  Score=332.52  Aligned_cols=249  Identities=29%  Similarity=0.450  Sum_probs=224.4

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhc-CCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK-GLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+++.+++..+++... +.++.++.+|++|+++++++++++.+.
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (263)
T 3ai3_A            3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSS   82 (263)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            6789999999999999999999999999999999999999888887777665 678999999999999999999999999


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                      + +++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||..++.+.+....|++||
T Consensus        83 ~-g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  161 (263)
T 3ai3_A           83 F-GGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTK  161 (263)
T ss_dssp             H-SSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             c-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCcchHHHHH
Confidence            8 799999999999888888999999999999999999999999999999888789999999999999989999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC---------ChhhHHHHhhc-CCCCCCCChHhHHHHHHHHh
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG---------NGKFVDEVKSR-TPMGRLGEPKEVSSLVAFLC  244 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~---------~~~~~~~~~~~-~~~~~~~~~~dva~~~~~l~  244 (270)
                      +++++|+++++.|++++||+|++|+||+++|++......         .+.....+... .|.+++.+|+|++++++||+
T Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~  241 (263)
T 3ai3_A          162 AALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFLC  241 (263)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTCSCBCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHc
Confidence            999999999999999999999999999999987543211         11222333344 78889999999999999999


Q ss_pred             CCCCCCccCcEEeecCCcccc
Q 024230          245 MPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       245 s~~~~~~~G~~i~vdgG~~~~  265 (270)
                      ++.+++++|+++.+|||+.+.
T Consensus       242 s~~~~~~~G~~~~vdgG~~~s  262 (263)
T 3ai3_A          242 SERATYSVGSAYFVDGGMLKT  262 (263)
T ss_dssp             STTCTTCCSCEEEESTTCCCC
T ss_pred             CccccCCCCcEEEECCCcccc
Confidence            998999999999999998753

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=8.2e-49  Score=335.01  Aligned_cols=247  Identities=32%  Similarity=0.478  Sum_probs=223.1

Q ss_pred             cccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           13 QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        13 ~~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      ...|++++|+++||||++|||+++|++|+++|++|++++|+++.+++..+++...+ ++.++.+|++|+++++++++++.
T Consensus        22 ~~~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~~~~  100 (276)
T 2b4q_A           22 HPYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPADLSSEAGARRLAQALG  100 (276)
T ss_dssp             CTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS-CEEECCCCTTSHHHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-ceEEEEeeCCCHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999999998888888776555 78899999999999999999999


Q ss_pred             HHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC----cEEEEecCccccccCCCCh
Q 024230           93 SLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGA----ASIVLMSSALGIVSANVGT  168 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~----g~ii~iss~~~~~~~~~~~  168 (270)
                      +.+ +++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|+|++++.    ++||++||..+..+.+...
T Consensus       101 ~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~~~  179 (276)
T 2b4q_A          101 ELS-ARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQA  179 (276)
T ss_dssp             HHC-SCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCCSC
T ss_pred             Hhc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCCCc
Confidence            998 79999999999988788889999999999999999999999999999987765    8999999999998888888


Q ss_pred             -hhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhh--cCCCCCCCChHhHHHHHHHHhC
Q 024230          169 -VYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKS--RTPMGRLGEPKEVSSLVAFLCM  245 (270)
Q Consensus       169 -~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~dva~~~~~l~s  245 (270)
                       .|++||+++++|+++++.|++++||+|++|+||+++|++.......  ..+.+..  ..|.+++.+|+|+|++++||++
T Consensus       180 ~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s  257 (276)
T 2b4q_A          180 YAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIAND--PQALEADSASIPMGRWGRPEEMAALAISLAG  257 (276)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHC--HHHHHHHHHTSTTSSCCCHHHHHHHHHHHHS
T ss_pred             cccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchh--HHHHHHhhcCCCCCCcCCHHHHHHHHHHHhC
Confidence             9999999999999999999999999999999999999987543211  2233344  6788899999999999999999


Q ss_pred             CCCCCccCcEEeecCCcc
Q 024230          246 PAASYITGQTVCIDGGFT  263 (270)
Q Consensus       246 ~~~~~~~G~~i~vdgG~~  263 (270)
                      +.+++++|+++.+|||+.
T Consensus       258 ~~~~~~tG~~i~vdGG~~  275 (276)
T 2b4q_A          258 TAGAYMTGNVIPIDGGFH  275 (276)
T ss_dssp             GGGTTCCSCEEEESTTTT
T ss_pred             ccccCCCCCEEEeCCCcc
Confidence            988999999999999975

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=4e-49  Score=333.06  Aligned_cols=247  Identities=24%  Similarity=0.374  Sum_probs=226.5

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEee-CChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCS-RTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~-r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      ...+++|+||||||++|||+++|++|+++|++|++++ |+.+..++..+++...+.++.++.+|++|.++++++++++.+
T Consensus         8 ~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   87 (256)
T 3ezl_A            8 HMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKA   87 (256)
T ss_dssp             -----CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHH
Confidence            4568899999999999999999999999999999987 666777777888887788899999999999999999999999


Q ss_pred             HcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhh
Q 024230           94 LFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                      .+ +++|++|||||.....++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++|
T Consensus        88 ~~-g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  166 (256)
T 3ezl_A           88 EV-GEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTA  166 (256)
T ss_dssp             HT-CCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSCCHHHHHH
T ss_pred             hc-CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCCCcccHHH
Confidence            98 79999999999988888999999999999999999999999999999999888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccC
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG  253 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  253 (270)
                      |+|+++|+++++.|++++||+|++|+||+++|++....  .+...+.+....+.+++.+|+|++++++||++++++++||
T Consensus       167 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG  244 (256)
T 3ezl_A          167 KAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI--RPDVLEKIVATIPVRRLGSPDEIGSIVAWLASEESGFSTG  244 (256)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS--CHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHHHHhCCEEEEEEECcccCcccccc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcccCCcC
Confidence            99999999999999999999999999999999987665  3455666777889999999999999999999999999999


Q ss_pred             cEEeecCCccc
Q 024230          254 QTVCIDGGFTV  264 (270)
Q Consensus       254 ~~i~vdgG~~~  264 (270)
                      +++.+|||+++
T Consensus       245 ~~i~vdgG~~~  255 (256)
T 3ezl_A          245 ADFSLNGGLHM  255 (256)
T ss_dssp             CEEEESTTSCC
T ss_pred             cEEEECCCEeC
Confidence            99999999976

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=6.1e-49  Score=333.01  Aligned_cols=248  Identities=21%  Similarity=0.310  Sum_probs=201.1

Q ss_pred             CCcccccccccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHH
Q 024230            5 QQTESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQR   84 (270)
Q Consensus         5 ~~~~~~~~~~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   84 (270)
                      ++++.+....+|+|+||++|||||++|||+++|++|+++|++|++++|+++...+...+.   +  +.++.+|+++++++
T Consensus        12 ~~~~~~~~~~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~Dv~~~~~v   86 (260)
T 3gem_A           12 SGRENLYFQGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQA---G--AVALYGDFSCETGI   86 (260)
T ss_dssp             ---------------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHH---T--CEEEECCTTSHHHH
T ss_pred             ccccCcccccCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhc---C--CeEEECCCCCHHHH
Confidence            344444456679999999999999999999999999999999999999987764433332   2  67889999999999


Q ss_pred             HHHHHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC
Q 024230           85 QTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA  164 (270)
Q Consensus        85 ~~~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~  164 (270)
                      +++++++.+.+ +++|+||||||.....+ .+.++++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.
T Consensus        87 ~~~~~~~~~~~-g~iD~lv~nAg~~~~~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~  164 (260)
T 3gem_A           87 MAFIDLLKTQT-SSLRAVVHNASEWLAET-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGS  164 (260)
T ss_dssp             HHHHHHHHHHC-SCCSEEEECCCCCCCCC-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCC
T ss_pred             HHHHHHHHHhc-CCCCEEEECCCccCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCC
Confidence            99999999998 89999999999876555 67788999999999999999999999999999888999999999999999


Q ss_pred             CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHh
Q 024230          165 NVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLC  244 (270)
Q Consensus       165 ~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  244 (270)
                      ++...|++||+|+++|+++++.|+++ +|+||+|+||+++|++..    ............|.++..+|+|++++++||+
T Consensus       165 ~~~~~Y~asKaa~~~l~~~la~e~~~-~Irvn~v~PG~v~t~~~~----~~~~~~~~~~~~p~~r~~~~edva~~v~~L~  239 (260)
T 3gem_A          165 SKHIAYCATKAGLESLTLSFAARFAP-LVKVNGIAPALLMFQPKD----DAAYRANALAKSALGIEPGAEVIYQSLRYLL  239 (260)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECTTCC-------------------CCSCCCCCTHHHHHHHHHHH
T ss_pred             CCcHhHHHHHHHHHHHHHHHHHHHCC-CCEEEEEeecccccCCCC----CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh
Confidence            99999999999999999999999998 699999999999998653    2233445556778899999999999999999


Q ss_pred             CCCCCCccCcEEeecCCccccc
Q 024230          245 MPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       245 s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                        .++++||++|.||||+++.+
T Consensus       240 --~~~~itG~~i~vdGG~~~~~  259 (260)
T 3gem_A          240 --DSTYVTGTTLTVNGGRHVKG  259 (260)
T ss_dssp             --HCSSCCSCEEEESTTTTTC-
T ss_pred             --hCCCCCCCEEEECCCcccCC
Confidence              47899999999999998764

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=9.7e-49  Score=333.31  Aligned_cols=249  Identities=27%  Similarity=0.423  Sum_probs=221.7

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEee-CChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCS-RTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~-r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      +..+++|+++||||++|||+++|++|+++|++|++++ ++.+..++..+++...+.++.++.+|++|.++++++++++.+
T Consensus        20 ~~~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   99 (269)
T 3gk3_A           20 GSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLA   99 (269)
T ss_dssp             ----CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hhhhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            3457899999999999999999999999999999998 666667777777777778899999999999999999999999


Q ss_pred             HcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhh
Q 024230           94 LFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                      .+ +++|+||||||.....++.+.+.++|++.+++|+.+++.+++.++|+|.+++.|+||++||..+..+.++...|++|
T Consensus       100 ~~-g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  178 (269)
T 3gk3_A          100 DF-GKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASA  178 (269)
T ss_dssp             HH-SCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHH
T ss_pred             Hc-CCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCcchHHHH
Confidence            98 79999999999988888999999999999999999999999999999998888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccC
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG  253 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  253 (270)
                      |+|+++|+++++.|++++||+|++|+||+++|+|....... .....+....+.+++.+|+|++++++||+++.+.++||
T Consensus       179 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG  257 (269)
T 3gk3_A          179 KAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQD-VLEAKILPQIPVGRLGRPDEVAALIAFLCSDDAGFVTG  257 (269)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC--------CCSGGGCTTSSCBCHHHHHHHHHHHTSTTCTTCCS
T ss_pred             HHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchh-HHHHHhhhcCCcCCccCHHHHHHHHHHHhCCCcCCeeC
Confidence            99999999999999999999999999999999998765321 11113445678889999999999999999999999999


Q ss_pred             cEEeecCCcccc
Q 024230          254 QTVCIDGGFTVN  265 (270)
Q Consensus       254 ~~i~vdgG~~~~  265 (270)
                      ++|.+|||+++.
T Consensus       258 ~~i~vdgG~~~s  269 (269)
T 3gk3_A          258 ADLAINGGMHMS  269 (269)
T ss_dssp             CEEEESTTSCCC
T ss_pred             cEEEECCCEeCc
Confidence            999999998763

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=9.6e-49  Score=331.72  Aligned_cols=246  Identities=28%  Similarity=0.450  Sum_probs=215.6

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhH-HHHHHHHHHhc-CCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETE-LNECIHHLQMK-GLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~-~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      |+||++|||||++|||+++|++|+++|++|++++|+++. +++..+++... +.++.++.+|++|+++++++++++.+.+
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            689999999999999999999999999999999999887 77777777654 6688999999999999999999999998


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKG  175 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKa  175 (270)
                       +++|+||||||.....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.++...|++||+
T Consensus        82 -g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  160 (260)
T 1x1t_A           82 -GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKH  160 (260)
T ss_dssp             -SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCCCchHHHHHH
Confidence             7999999999998778888999999999999999999999999999998887899999999999999899999999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC---------hhhHHHH-hhcCCCCCCCChHhHHHHHHHHhC
Q 024230          176 AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN---------GKFVDEV-KSRTPMGRLGEPKEVSSLVAFLCM  245 (270)
Q Consensus       176 al~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~---------~~~~~~~-~~~~~~~~~~~~~dva~~~~~l~s  245 (270)
                      ++++|+++++.|++++||+|++|+||+++|++.......         +...+.+ ....|.+++.+|+|++++++||++
T Consensus       161 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s  240 (260)
T 1x1t_A          161 GVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLAS  240 (260)
T ss_dssp             HHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCCCCcCHHHHHHHHHHHhC
Confidence            999999999999999999999999999999987653211         1122222 344678899999999999999999


Q ss_pred             CCCCCccCcEEeecCCccc
Q 024230          246 PAASYITGQTVCIDGGFTV  264 (270)
Q Consensus       246 ~~~~~~~G~~i~vdgG~~~  264 (270)
                      +.+++++|+++.+|||+.+
T Consensus       241 ~~~~~~tG~~~~vdgG~~~  259 (260)
T 1x1t_A          241 DAAAQITGTTVSVDGGWTA  259 (260)
T ss_dssp             GGGTTCCSCEEEESTTGGG
T ss_pred             hhhcCCCCCEEEECCCccC
Confidence            9889999999999999864

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=1.2e-48  Score=329.13  Aligned_cols=243  Identities=30%  Similarity=0.428  Sum_probs=209.5

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh-hHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTE-TELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .+|++|+++||||++|||+++|++|+++|++|++++|++ +.+++   +++..+.++.++.+|++|+++++++++++.+.
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (249)
T 2ew8_A            3 QRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNLGRRVLTVKCDVSQPGDVEAFGKQVIST   79 (249)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhcCCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence            458899999999999999999999999999999999998 66554   44455678999999999999999999999998


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                      + +++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||..++.+.++...|++||
T Consensus        80 ~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  158 (249)
T 2ew8_A           80 F-GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTK  158 (249)
T ss_dssp             H-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHH
T ss_pred             c-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCchhHHHHH
Confidence            8 899999999999877888899999999999999999999999999999988789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCc-cccCC-hhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCcc
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTE-PLLGN-GKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT  252 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  252 (270)
                      +++++|+++++.|++++||+|++|+||+++|++.. ..... +...+.+.  .|.+++.+|+|++++++||+++.+++++
T Consensus       159 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~dva~~~~~l~s~~~~~~t  236 (249)
T 2ew8_A          159 AANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNML--QAIPRLQVPLDLTGAAAFLASDDASFIT  236 (249)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTT--SSSCSCCCTHHHHHHHHHHTSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccchhhHHHHhh--CccCCCCCHHHHHHHHHHHcCcccCCCC
Confidence            99999999999999999999999999999999875 32211 11111111  5778899999999999999999889999


Q ss_pred             CcEEeecCCccc
Q 024230          253 GQTVCIDGGFTV  264 (270)
Q Consensus       253 G~~i~vdgG~~~  264 (270)
                      |+++.+|||++.
T Consensus       237 G~~~~vdGG~~~  248 (249)
T 2ew8_A          237 GQTLAVDGGMVR  248 (249)
T ss_dssp             SCEEEESSSCCC
T ss_pred             CcEEEECCCccC
Confidence            999999999864

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=1.8e-48  Score=333.76  Aligned_cols=246  Identities=29%  Similarity=0.394  Sum_probs=216.5

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      |+|+||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++   +.++.++.+|++++++++++++++.+.+
T Consensus         1 M~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   77 (281)
T 3zv4_A            1 MKLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH---GGNAVGVVGDVRSLQDQKRAAERCLAAF   77 (281)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---BTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc---CCcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            5789999999999999999999999999999999999998877765543   5689999999999999999999999998


Q ss_pred             CCcccEEEECCCCCCCC-CC----CCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhh
Q 024230           96 NGKLNIFVNNVGTSVLK-PT----LEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVY  170 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~-~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y  170 (270)
                       +++|+||||||..... ++    .+.+.++|++++++|+.+++.++++++|+|.+++ |+||++||..+..+.++...|
T Consensus        78 -g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y  155 (281)
T 3zv4_A           78 -GKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR-GSVVFTISNAGFYPNGGGPLY  155 (281)
T ss_dssp             -SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSSSSSCHHH
T ss_pred             -CCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CeEEEEecchhccCCCCCchh
Confidence             8999999999986432 22    3456788999999999999999999999998764 899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC--------ChhhHHHHhhcCCCCCCCChHhHHHHHHH
Q 024230          171 SATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG--------NGKFVDEVKSRTPMGRLGEPKEVSSLVAF  242 (270)
Q Consensus       171 ~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~dva~~~~~  242 (270)
                      ++||+|+++|+++++.|+++. |+||+|+||+++|+|......        .....+.+....|.+|+.+|+|++++++|
T Consensus       156 ~asKaa~~~l~~~la~e~~~~-Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~f  234 (281)
T 3zv4_A          156 TATKHAVVGLVRQMAFELAPH-VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYVF  234 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTTSSCCCGGGGSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCC-CEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            999999999999999999987 999999999999998754321        11234556778899999999999999999


Q ss_pred             HhC-CCCCCccCcEEeecCCcccccc
Q 024230          243 LCM-PAASYITGQTVCIDGGFTVNGF  267 (270)
Q Consensus       243 l~s-~~~~~~~G~~i~vdgG~~~~~~  267 (270)
                      |++ +.+.++||++|.+|||+++.++
T Consensus       235 L~s~~~~~~itG~~i~vdGG~~~~~~  260 (281)
T 3zv4_A          235 FATRGDSLPATGALLNYDGGMGVRGF  260 (281)
T ss_dssp             HHSTTTSTTCSSCEEEESSSGGGCCS
T ss_pred             hhcccccccccCcEEEECCCCccccc
Confidence            999 7899999999999999998765

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=8e-49  Score=335.71  Aligned_cols=253  Identities=19%  Similarity=0.230  Sum_probs=224.8

Q ss_pred             ccccCCCCCCEEEEecCC--CcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHH
Q 024230           12 RQNRWSLQGMTALVTGGT--KGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLIN   89 (270)
Q Consensus        12 ~~~~~~l~gk~vlItG~s--~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   89 (270)
                      ...+.+++||++|||||+  +|||+++|++|+++|++|++++|+.  .++..+++.....++.++.+|++++++++++++
T Consensus        18 ~~~M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~   95 (280)
T 3nrc_A           18 GSHMGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFV   95 (280)
T ss_dssp             ----CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHH
T ss_pred             CCcccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhcCCceEEEeecCCHHHHHHHHH
Confidence            344568999999999988  7799999999999999999999987  334445555444568899999999999999999


Q ss_pred             HHHHHcCCcccEEEECCCCCCC----CCCCC-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC
Q 024230           90 TVSSLFNGKLNIFVNNVGTSVL----KPTLE-YNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA  164 (270)
Q Consensus        90 ~i~~~~~~~id~li~~ag~~~~----~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~  164 (270)
                      ++.+.+ +++|++|||||....    .++.+ .+.++|++.+++|+.+++.++++++|+|.++ .|+||++||..+..+.
T Consensus        96 ~~~~~~-g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~  173 (280)
T 3nrc_A           96 ELGKVW-DGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR-NASMVALTYIGAEKAM  173 (280)
T ss_dssp             HHHHHC-SSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-TCEEEEEECGGGTSCC
T ss_pred             HHHHHc-CCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEeccccccCC
Confidence            999998 899999999998764    45555 8999999999999999999999999999866 6899999999999999


Q ss_pred             CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHh
Q 024230          165 NVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLC  244 (270)
Q Consensus       165 ~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  244 (270)
                      ++...|++||+|+++|+++++.|++++||+|++|+||+++|++...........+......|.++..+|+|+|++++||+
T Consensus       174 ~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~~l~  253 (280)
T 3nrc_A          174 PSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTVAFLC  253 (280)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTTCSCCCHHHHHHHHHHTT
T ss_pred             CCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999998876555566677777889999999999999999999


Q ss_pred             CCCCCCccCcEEeecCCccccccc
Q 024230          245 MPAASYITGQTVCIDGGFTVNGFF  268 (270)
Q Consensus       245 s~~~~~~~G~~i~vdgG~~~~~~~  268 (270)
                      ++.++++||++|.+|||+.+.+++
T Consensus       254 s~~~~~~tG~~i~vdgG~~~~~~~  277 (280)
T 3nrc_A          254 SDMATGITGEVVHVDAGYHCVSMG  277 (280)
T ss_dssp             SGGGTTCCSCEEEESTTGGGCCCC
T ss_pred             CcccCCcCCcEEEECCCccccCCC
Confidence            999999999999999999988753

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=2.8e-48  Score=326.12  Aligned_cols=243  Identities=28%  Similarity=0.421  Sum_probs=218.9

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      |+|++|+++||||++|||+++|++|+++|++|++++|+++.+++..+++   +  +.++.+|++|+++++++++++.+.+
T Consensus         1 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~D~~~~~~~~~~~~~~~~~~   75 (245)
T 1uls_A            1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV---G--AHPVVMDVADPASVERGFAEALAHL   75 (245)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---T--CEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C--CEEEEecCCCHHHHHHHHHHHHHHc
Confidence            4688999999999999999999999999999999999988776655433   2  6788999999999999999999998


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKG  175 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKa  175 (270)
                       +++|++|||||.....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||.. ..+.++...|++||+
T Consensus        76 -g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~~~~Y~asK~  153 (245)
T 1uls_A           76 -GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLGQANYAASMA  153 (245)
T ss_dssp             -SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTTCHHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCCchhHHHHHH
Confidence             899999999999887888899999999999999999999999999999888789999999998 888888999999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcE
Q 024230          176 AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT  255 (270)
Q Consensus       176 al~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  255 (270)
                      ++++|+++++.|++++||+|++|+||+++|++...+  .+...+.+....|.++..+|+|+|+.++||+++.+++++|++
T Consensus       154 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~~~~tG~~  231 (245)
T 1uls_A          154 GVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV--PEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQV  231 (245)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS--CHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhc--CHHHHHHHHhhCCCCCCcCHHHHHHHHHHHhCchhcCCcCCE
Confidence            999999999999999999999999999999987653  223344455567888999999999999999999889999999


Q ss_pred             EeecCCcccccc
Q 024230          256 VCIDGGFTVNGF  267 (270)
Q Consensus       256 i~vdgG~~~~~~  267 (270)
                      +.+|||+.+...
T Consensus       232 ~~vdgG~~~~~~  243 (245)
T 1uls_A          232 LFVDGGRTIGAA  243 (245)
T ss_dssp             EEESTTTTTTC-
T ss_pred             EEECCCcccCCC
Confidence            999999987653

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-48  Score=330.15  Aligned_cols=244  Identities=27%  Similarity=0.368  Sum_probs=222.1

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      +|+++||||++|||+++|++|+++|++|++++|+++.+++..+++...+.++.++.+|++|+++++++++++.+.+ +++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~i   80 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTL-GGF   80 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHT-TCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-CCC
Confidence            6999999999999999999999999999999999998888888887777789999999999999999999999998 799


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCccccccCCCChhhhhhHHHHH
Q 024230          100 NIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIVSANVGTVYSATKGAMN  178 (270)
Q Consensus       100 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~~~~~~~~~~~y~~sKaal~  178 (270)
                      |+||||||.....++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..+..+.++...|++||++++
T Consensus        81 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~  160 (256)
T 1geg_A           81 DVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVR  160 (256)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHHHHHHHHH
Confidence            9999999998778888999999999999999999999999999998876 789999999999999999999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEecCcccCCCCcccc---------CChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCC
Q 024230          179 QLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLL---------GNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAAS  249 (270)
Q Consensus       179 ~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  249 (270)
                      +|+++++.|++++||+|++|+||+++|++.....         ......+.+....|.+++.+|+|+|++++||+++.++
T Consensus       161 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~  240 (256)
T 1geg_A          161 GLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSD  240 (256)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence            9999999999999999999999999999864431         0122234455567888999999999999999999889


Q ss_pred             CccCcEEeecCCccc
Q 024230          250 YITGQTVCIDGGFTV  264 (270)
Q Consensus       250 ~~~G~~i~vdgG~~~  264 (270)
                      +++|+++.+|||+++
T Consensus       241 ~~tG~~i~vdGG~~~  255 (256)
T 1geg_A          241 YMTGQSLLIDGGMVF  255 (256)
T ss_dssp             TCCSCEEEESSSSSC
T ss_pred             CCCCCEEEeCCCccC
Confidence            999999999999875

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=1.6e-48  Score=331.25  Aligned_cols=252  Identities=21%  Similarity=0.286  Sum_probs=228.4

Q ss_pred             cCCCCCCEEEEecCC--CcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCC-eEEEEEccCCCHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGT--KGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGL-KVTGSVCDVSSRPQRQTLINTV   91 (270)
Q Consensus        15 ~~~l~gk~vlItG~s--~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~i   91 (270)
                      .++++||++|||||+  +|||+++|++|+++|++|++++|+++..+...+...+.+. ++.++.+|++|+++++++++++
T Consensus         2 ~~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   81 (266)
T 3oig_A            2 NFSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASI   81 (266)
T ss_dssp             CSCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHH
T ss_pred             ccccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHH
Confidence            468999999999999  6699999999999999999999997666655555555444 7999999999999999999999


Q ss_pred             HHHcCCcccEEEECCCCCC----CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCC
Q 024230           92 SSLFNGKLNIFVNNVGTSV----LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG  167 (270)
Q Consensus        92 ~~~~~~~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~  167 (270)
                      .+.+ +++|++|||||...    ..++.+.+.++|++.+++|+.+++.++++++|+|++  .|+||++||..+..+.++.
T Consensus        82 ~~~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~  158 (266)
T 3oig_A           82 KEQV-GVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE--GGSIVTLTYLGGELVMPNY  158 (266)
T ss_dssp             HHHH-SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTSCCTTT
T ss_pred             HHHh-CCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC--CceEEEEecccccccCCCc
Confidence            9998 79999999999876    467788999999999999999999999999999864  5899999999999999999


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCC
Q 024230          168 TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA  247 (270)
Q Consensus       168 ~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (270)
                      ..|++||+|+++|+++++.|++++||+|++|+||+++|++.............+....+.++..+|+|++++++||+++.
T Consensus       159 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~~l~s~~  238 (266)
T 3oig_A          159 NVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPLRRTTTPEEVGDTAAFLFSDM  238 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGG
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCc
Confidence            99999999999999999999999999999999999999988776555566667777889999999999999999999999


Q ss_pred             CCCccCcEEeecCCcccccccc
Q 024230          248 ASYITGQTVCIDGGFTVNGFFF  269 (270)
Q Consensus       248 ~~~~~G~~i~vdgG~~~~~~~~  269 (270)
                      ++++||++|.+|||+...+.+.
T Consensus       239 ~~~~tG~~i~vdGG~~~~~~~~  260 (266)
T 3oig_A          239 SRGITGENLHVDSGFHITARLE  260 (266)
T ss_dssp             GTTCCSCEEEESTTGGGCCCCC
T ss_pred             hhcCcCCEEEECCCeEEeeecC
Confidence            9999999999999999987754

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=4.2e-48  Score=329.00  Aligned_cols=254  Identities=26%  Similarity=0.337  Sum_probs=223.5

Q ss_pred             CcccccccccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEE-eeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHH
Q 024230            6 QTESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHT-CSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQR   84 (270)
Q Consensus         6 ~~~~~~~~~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l-~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   84 (270)
                      ++..+....+.++++|++|||||++|||+++|++|+++|++|++ ..|+.+..++..+++...+.++.++.+|++|++++
T Consensus        12 ~~~~~n~~~~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~   91 (267)
T 4iiu_A           12 DLGTENLYFQSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQC   91 (267)
T ss_dssp             -------------CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             ccCChhhhhccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHH
Confidence            33445555567899999999999999999999999999999866 56777788888888888888999999999999999


Q ss_pred             HHHHHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCcEEEEecCcccccc
Q 024230           85 QTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLR-ASGAASIVLMSSALGIVS  163 (270)
Q Consensus        85 ~~~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~-~~~~g~ii~iss~~~~~~  163 (270)
                      +++++++.+.+ +++|++|||||.....++.+.+.++|++.+++|+.+++.+++.+++.|. +++.++||++||..+..+
T Consensus        92 ~~~~~~~~~~~-g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~  170 (267)
T 4iiu_A           92 REVLEHEIAQH-GAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMG  170 (267)
T ss_dssp             HHHHHHHHHHH-CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHC
T ss_pred             HHHHHHHHHHh-CCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccC
Confidence            99999999998 8999999999998888889999999999999999999999999999886 556789999999999999


Q ss_pred             CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHH
Q 024230          164 ANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFL  243 (270)
Q Consensus       164 ~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  243 (270)
                      .++...|++||+|+++|+++++.|++++||+|++|+||+++|++....   ...........|.++..+|+|++++++||
T Consensus       171 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~p~~~~~~~edva~~~~~L  247 (267)
T 4iiu_A          171 NRGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME---ESALKEAMSMIPMKRMGQAEEVAGLASYL  247 (267)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC---HHHHHHHHHTCTTCSCBCHHHHHHHHHHH
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc---HHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999987654   45556667788999999999999999999


Q ss_pred             hCCCCCCccCcEEeecCCcc
Q 024230          244 CMPAASYITGQTVCIDGGFT  263 (270)
Q Consensus       244 ~s~~~~~~~G~~i~vdgG~~  263 (270)
                      +++.++++||++|.+|||+.
T Consensus       248 ~s~~~~~itG~~i~vdGG~~  267 (267)
T 4iiu_A          248 MSDIAGYVTRQVISINGGML  267 (267)
T ss_dssp             HSGGGTTCCSCEEEESTTCC
T ss_pred             hCCcccCccCCEEEeCCCcC
Confidence            99999999999999999973

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=3.2e-48  Score=328.45  Aligned_cols=249  Identities=32%  Similarity=0.493  Sum_probs=224.7

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+++.+++..+++...+.++.++.+|++|+++++++++++.+.+
T Consensus        10 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   89 (260)
T 2zat_A           10 KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLH   89 (260)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            46889999999999999999999999999999999999998888888887777789999999999999999999999988


Q ss_pred             CCcccEEEECCCCCC-CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           96 NGKLNIFVNNVGTSV-LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        96 ~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                       +++|++|||||... ..++.+.+.++|++++++|+.+++.++++++|+|++++.++||++||..++.+.++...|++||
T Consensus        90 -g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  168 (260)
T 2zat_A           90 -GGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSK  168 (260)
T ss_dssp             -SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCchhHHHHH
Confidence             79999999999864 4677889999999999999999999999999999988889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCc
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ  254 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  254 (270)
                      +++++|+++++.|++++||+|++|+||+++|++.............+....|.+++.+|+|+++++.||+++.+++++|+
T Consensus       169 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~  248 (260)
T 2zat_A          169 TALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSEDASYITGE  248 (260)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHHHTCSSCBCGGGGHHHHHHHTSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCccCC
Confidence            99999999999999999999999999999999875432222223334445678889999999999999999988999999


Q ss_pred             EEeecCCcccc
Q 024230          255 TVCIDGGFTVN  265 (270)
Q Consensus       255 ~i~vdgG~~~~  265 (270)
                      ++.+|||+...
T Consensus       249 ~~~vdgG~~~s  259 (260)
T 2zat_A          249 TVVVGGGTASR  259 (260)
T ss_dssp             EEEESTTCCCC
T ss_pred             EEEECCCcccc
Confidence            99999998754

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=1.7e-48  Score=333.14  Aligned_cols=244  Identities=27%  Similarity=0.383  Sum_probs=213.4

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCC------------hhHHHHHHHHHHhcCCeEEEEEccCCCHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRT------------ETELNECIHHLQMKGLKVTGSVCDVSSRP   82 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~------------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   82 (270)
                      ..+|+||++|||||++|||+++|++|+++|++|++++|+            .+.+++..+++...+.++.++.+|++|++
T Consensus         8 ~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   87 (278)
T 3sx2_A            8 EGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRE   87 (278)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHH
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHH
Confidence            467899999999999999999999999999999999987            67777777888777889999999999999


Q ss_pred             HHHHHHHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCcccc
Q 024230           83 QRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGI  161 (270)
Q Consensus        83 ~~~~~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~~~  161 (270)
                      +++++++++.+.+ +++|+||||||.....+    +.++|++++++|+.+++.++++++|+|.+++ .|+||++||..+.
T Consensus        88 ~v~~~~~~~~~~~-g~id~lv~nAg~~~~~~----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~  162 (278)
T 3sx2_A           88 SLSAALQAGLDEL-GRLDIVVANAGIAPMSA----GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGL  162 (278)
T ss_dssp             HHHHHHHHHHHHH-CCCCEEEECCCCCCCSS----THHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHc-CCCCEEEECCCCCCCCC----CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhc
Confidence            9999999999998 89999999999865443    5899999999999999999999999998865 6899999999998


Q ss_pred             ccC----CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHH---------HHhhcCCCC
Q 024230          162 VSA----NVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVD---------EVKSRTPMG  228 (270)
Q Consensus       162 ~~~----~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~---------~~~~~~~~~  228 (270)
                      .+.    ++...|++||+|+++|+++++.|++++||+||+|+||+++|+|............         .+....| +
T Consensus       163 ~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~  241 (278)
T 3sx2_A          163 AGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMP-V  241 (278)
T ss_dssp             SCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSSS-C
T ss_pred             CCCccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhcC-c
Confidence            876    6678899999999999999999999999999999999999998764321111100         1112334 6


Q ss_pred             CCCChHhHHHHHHHHhCCCCCCccCcEEeecCCccc
Q 024230          229 RLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTV  264 (270)
Q Consensus       229 ~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~  264 (270)
                      ++.+|+|+|++++||+++.++++||++|.+|||+++
T Consensus       242 ~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~~  277 (278)
T 3sx2_A          242 EVLAPEDVANAVAWLVSDQARYITGVTLPVDAGFLN  277 (278)
T ss_dssp             SSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred             CcCCHHHHHHHHHHHhCcccccccCCEEeECCCccc
Confidence            788999999999999999999999999999999874

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=2.9e-48  Score=327.37  Aligned_cols=239  Identities=25%  Similarity=0.286  Sum_probs=213.7

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcC-CeEEEEEccC--CCHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG-LKVTGSVCDV--SSRPQRQTLINTVS   92 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~--~~~~~~~~~~~~i~   92 (270)
                      ..|+||++|||||++|||+++|++|+++|++|++++|+++.+++..+++...+ .++.++.+|+  +++++++++++++.
T Consensus         8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (252)
T 3f1l_A            8 DLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIA   87 (252)
T ss_dssp             TTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999999999988888887654 3788899999  99999999999999


Q ss_pred             HHcCCcccEEEECCCCC-CCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhh
Q 024230           93 SLFNGKLNIFVNNVGTS-VLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYS  171 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~  171 (270)
                      +.+ +++|+||||||.. ...++.+.++++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.++...|+
T Consensus        88 ~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~  166 (252)
T 3f1l_A           88 VNY-PRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYA  166 (252)
T ss_dssp             HHC-SCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTTCHHHH
T ss_pred             HhC-CCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCCCchhH
Confidence            998 8999999999985 45788999999999999999999999999999999998889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCc
Q 024230          172 ATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI  251 (270)
Q Consensus       172 ~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  251 (270)
                      +||+|+++|+++++.|+++. |+||+|+||+++|+|.......          .+..++.+|+|+++.++||+++.++++
T Consensus       167 asK~a~~~l~~~la~e~~~~-irvn~v~PG~v~t~~~~~~~~~----------~~~~~~~~p~dva~~~~~L~s~~~~~i  235 (252)
T 3f1l_A          167 ASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAMRASAFPT----------EDPQKLKTPADIMPLYLWLMGDDSRRK  235 (252)
T ss_dssp             HHHHHHHHHHHHHHHHTTTT-CEEEEEECCSBSSHHHHHHCTT----------CCGGGSBCTGGGHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHhcCC-cEEEEEecCcccCchhhhhCCc----------cchhccCCHHHHHHHHHHHcCccccCC
Confidence            99999999999999999987 9999999999999875433211          122356789999999999999999999


Q ss_pred             cCcEEeecCCccccc
Q 024230          252 TGQTVCIDGGFTVNG  266 (270)
Q Consensus       252 ~G~~i~vdgG~~~~~  266 (270)
                      ||++|.+|||+....
T Consensus       236 tG~~i~vdgG~~~~~  250 (252)
T 3f1l_A          236 TGMTFDAQPGRKPGI  250 (252)
T ss_dssp             CSCEEESSCC-----
T ss_pred             CCCEEEeCCCcCCCC
Confidence            999999999997653

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=3.6e-48  Score=328.17  Aligned_cols=247  Identities=28%  Similarity=0.353  Sum_probs=217.8

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK--GLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      |++++|++|||||++|||+++|++|+++|++|++++|+++.+++..+++...  +.++.++.+|++|+++++++++++.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (260)
T 2z1n_A            3 LGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARD   82 (260)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999999888887777643  34788999999999999999999999


Q ss_pred             HcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhh
Q 024230           94 LFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                      .+ + +|++|||||.....++.+.+.++|++.+++|+.+++.++++++|+|.+++.|+||++||..++.+.++...|++|
T Consensus        83 ~~-g-id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  160 (260)
T 2z1n_A           83 LG-G-ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIM  160 (260)
T ss_dssp             TT-C-CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             hc-C-CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCchhHHH
Confidence            88 6 999999999987788889999999999999999999999999999988888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCcccc-------C-Chhh-HHHHhhcCCCCCCCChHhHHHHHHHHh
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLL-------G-NGKF-VDEVKSRTPMGRLGEPKEVSSLVAFLC  244 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~-------~-~~~~-~~~~~~~~~~~~~~~~~dva~~~~~l~  244 (270)
                      |+++++|+++++.|++++||+|++|+||+++|++.....       . .... ...+....|.+++.+|+|++++++||+
T Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~  240 (260)
T 2z1n_A          161 RLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAFLA  240 (260)
T ss_dssp             THHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CCTTSSCCCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccCHHHHHHHHHHHh
Confidence            999999999999999999999999999999999876210       0 1111 233445568889999999999999999


Q ss_pred             CCCCCCccCcEEeecCCccc
Q 024230          245 MPAASYITGQTVCIDGGFTV  264 (270)
Q Consensus       245 s~~~~~~~G~~i~vdgG~~~  264 (270)
                      ++.+++++|+++.+|||+++
T Consensus       241 s~~~~~~tG~~i~vdGG~~~  260 (260)
T 2z1n_A          241 SEKASFITGAVIPVDGGAHI  260 (260)
T ss_dssp             SGGGTTCCSCEEEESTTTTC
T ss_pred             CccccCCCCCEEEeCCCccC
Confidence            99889999999999999763

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=1.6e-48  Score=333.44  Aligned_cols=250  Identities=30%  Similarity=0.477  Sum_probs=225.5

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      .++++++|++|||||++|||+++|++|+++|++|++++|+++.+++..++++..+.++.++.+|++|+++++++++++.+
T Consensus        16 ~m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   95 (277)
T 2rhc_B           16 HMATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVE   95 (277)
T ss_dssp             TTCCTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            34479999999999999999999999999999999999999988888888877777899999999999999999999999


Q ss_pred             HcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHH--HHhcCCcEEEEecCccccccCCCChhhh
Q 024230           94 LFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPL--LRASGAASIVLMSSALGIVSANVGTVYS  171 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--m~~~~~g~ii~iss~~~~~~~~~~~~y~  171 (270)
                      .+ +++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.  |.+++.|+||++||..+..+.+....|+
T Consensus        96 ~~-g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~  174 (277)
T 2rhc_B           96 RY-GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYS  174 (277)
T ss_dssp             HT-CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTTCHHHH
T ss_pred             Hh-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCCCccHH
Confidence            98 79999999999987788889999999999999999999999999999  9887779999999999999989999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC---C------hhhHHHHhhcCCCCCCCChHhHHHHHHH
Q 024230          172 ATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG---N------GKFVDEVKSRTPMGRLGEPKEVSSLVAF  242 (270)
Q Consensus       172 ~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~---~------~~~~~~~~~~~~~~~~~~~~dva~~~~~  242 (270)
                      +||+++++|+++++.|+++.||+|++|+||+++|++......   .      +...+.+....|.+++.+|+|+|++++|
T Consensus       175 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~  254 (277)
T 2rhc_B          175 ASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAY  254 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            999999999999999999999999999999999997644310   0      1222334455788899999999999999


Q ss_pred             HhCCCCCCccCcEEeecCCccc
Q 024230          243 LCMPAASYITGQTVCIDGGFTV  264 (270)
Q Consensus       243 l~s~~~~~~~G~~i~vdgG~~~  264 (270)
                      |+++.+++++|+++.+|||+..
T Consensus       255 l~s~~~~~~tG~~~~vdGG~~~  276 (277)
T 2rhc_B          255 LIGPGAAAVTAQALNVCGGLGN  276 (277)
T ss_dssp             HHSGGGTTCCSCEEEESTTCCC
T ss_pred             HhCchhcCCCCcEEEECCCccc
Confidence            9999889999999999999864

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.9e-48  Score=336.07  Aligned_cols=255  Identities=27%  Similarity=0.419  Sum_probs=222.1

Q ss_pred             cccccccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCC---eEEEEEccCCCHHHHH
Q 024230            9 SHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGL---KVTGSVCDVSSRPQRQ   85 (270)
Q Consensus         9 ~~~~~~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~   85 (270)
                      ......+|+++||++|||||++|||+++|++|+++|++|++++|+++.+++..+++...+.   ++.++.+|++|+++++
T Consensus        15 ~~~~~~m~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~   94 (297)
T 1xhl_A           15 VPRGSHMARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQD   94 (297)
T ss_dssp             --------CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHH
T ss_pred             ccccccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHH
Confidence            3344556789999999999999999999999999999999999999998888888877665   7999999999999999


Q ss_pred             HHHHHHHHHcCCcccEEEECCCCCCCCC--CCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccccc
Q 024230           86 TLINTVSSLFNGKLNIFVNNVGTSVLKP--TLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVS  163 (270)
Q Consensus        86 ~~~~~i~~~~~~~id~li~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~  163 (270)
                      ++++++.+.+ +++|+||||||.....+  +.+.+.++|++++++|+.+++.++++++|+|.+++ |+||++||..+..+
T Consensus        95 ~~~~~~~~~~-g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~  172 (297)
T 1xhl_A           95 DIINTTLAKF-GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQ  172 (297)
T ss_dssp             HHHHHHHHHH-SCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSS
T ss_pred             HHHHHHHHhc-CCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccC
Confidence            9999999998 79999999999877666  88899999999999999999999999999998776 99999999999888


Q ss_pred             C-CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC-------hhhHHHHhhcCCCCCCCChHh
Q 024230          164 A-NVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN-------GKFVDEVKSRTPMGRLGEPKE  235 (270)
Q Consensus       164 ~-~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~d  235 (270)
                      . ++...|++||+++++|+++++.|++++||+|++|+||+++|++.......       ....+.+....|.+++.+|+|
T Consensus       173 ~~~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~ped  252 (297)
T 1xhl_A          173 AHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEE  252 (297)
T ss_dssp             CCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHH
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCCCCCCcCHHH
Confidence            7 88899999999999999999999999999999999999999986543211       112223334567889999999


Q ss_pred             HHHHHHHHhCCC-CCCccCcEEeecCCcccc
Q 024230          236 VSSLVAFLCMPA-ASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       236 va~~~~~l~s~~-~~~~~G~~i~vdgG~~~~  265 (270)
                      +|++++||+++. +++++|+++.+|||+.+.
T Consensus       253 vA~~v~~l~s~~~~~~itG~~i~vdGG~~~~  283 (297)
T 1xhl_A          253 IANIIVFLADRNLSSYIIGQSIVADGGSTLV  283 (297)
T ss_dssp             HHHHHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHHhCCcccCCccCcEEEECCCcccc
Confidence            999999999987 889999999999998764

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=1.6e-48  Score=328.82  Aligned_cols=246  Identities=26%  Similarity=0.364  Sum_probs=188.1

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .|++++|++|||||++|||+++|++|+++|++|++++|+++.++++.+++...+.++.++.+|++|+++++++++++.+.
T Consensus         4 ~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (253)
T 3qiv_A            4 SMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAE   83 (253)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999999999999999888889999999999999999999999999


Q ss_pred             cCCcccEEEECCCCC---CCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhh
Q 024230           95 FNGKLNIFVNNVGTS---VLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYS  171 (270)
Q Consensus        95 ~~~~id~li~~ag~~---~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~  171 (270)
                      + +++|++|||||..   ...++.+.+.++|++.+++|+.+++.++++++|+|.+++.++||++||..++   +....|+
T Consensus        84 ~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~---~~~~~Y~  159 (253)
T 3qiv_A           84 F-GGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW---LYSNYYG  159 (253)
T ss_dssp             H-SCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------
T ss_pred             c-CCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCcccc---CCCchhH
Confidence            8 7999999999983   4556778999999999999999999999999999999888999999999887   4456799


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCc
Q 024230          172 ATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI  251 (270)
Q Consensus       172 ~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  251 (270)
                      +||+++++|+++++.|++++||+|++|+||+++|++...... ....+.+....|.++..+|+|++++++||+++..+++
T Consensus       160 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  238 (253)
T 3qiv_A          160 LAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTP-KEMVDDIVKGLPLSRMGTPDDLVGMCLFLLSDEASWI  238 (253)
T ss_dssp             CCHHHHHHHHHHHHHHTTTTTEEEEEEEC--------------------------------CCHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCc-HHHHHHHhccCCCCCCCCHHHHHHHHHHHcCccccCC
Confidence            999999999999999999999999999999999998765432 2344455566788889999999999999999999999


Q ss_pred             cCcEEeecCCcccc
Q 024230          252 TGQTVCIDGGFTVN  265 (270)
Q Consensus       252 ~G~~i~vdgG~~~~  265 (270)
                      +|+++.+|||+.+.
T Consensus       239 tG~~~~vdgG~~~~  252 (253)
T 3qiv_A          239 TGQIFNVDGGQIIR  252 (253)
T ss_dssp             CSCEEEC-------
T ss_pred             CCCEEEECCCeecC
Confidence            99999999999875

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=1.2e-48  Score=332.86  Aligned_cols=241  Identities=28%  Similarity=0.452  Sum_probs=216.0

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      ...+++||+||||||++|||+++|++|+++|++|++++|+++...          ..+..+.+|++|+++++++++++.+
T Consensus         8 ~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~Dv~~~~~v~~~~~~~~~   77 (269)
T 3vtz_A            8 HMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV----------NVSDHFKIDVTNEEEVKEAVEKTTK   77 (269)
T ss_dssp             --CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT----------TSSEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc----------CceeEEEecCCCHHHHHHHHHHHHH
Confidence            346889999999999999999999999999999999999876531          2466789999999999999999999


Q ss_pred             HcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhh
Q 024230           94 LFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                      .+ +++|+||||||.....++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..++.+.++...|++|
T Consensus        78 ~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  156 (269)
T 3vtz_A           78 KY-GRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTS  156 (269)
T ss_dssp             HH-SCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHH
T ss_pred             Hc-CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCChhHHHH
Confidence            98 89999999999988888999999999999999999999999999999998888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC------C---hhhHHHHhhcCCCCCCCChHhHHHHHHHHh
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG------N---GKFVDEVKSRTPMGRLGEPKEVSSLVAFLC  244 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~------~---~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  244 (270)
                      |+|+++|+++++.|+++ +|+|++|+||+++|+|......      .   ....+.+....|.+++.+|+|++++++||+
T Consensus       157 Kaa~~~l~~~la~e~~~-~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~  235 (269)
T 3vtz_A          157 KHALLGLTRSVAIDYAP-KIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLA  235 (269)
T ss_dssp             HHHHHHHHHHHHHHHTT-TEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcC-CCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            99999999999999998 8999999999999998644311      1   234455566789999999999999999999


Q ss_pred             CCCCCCccCcEEeecCCccccc
Q 024230          245 MPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       245 s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                      ++.++++||++|.+|||+....
T Consensus       236 s~~~~~itG~~i~vdGG~~~~~  257 (269)
T 3vtz_A          236 SDRSSFITGACLTVDGGLLSKL  257 (269)
T ss_dssp             SGGGTTCCSCEEEESTTGGGBC
T ss_pred             CCccCCCcCcEEEECCCccccC
Confidence            9999999999999999998754

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=8.2e-48  Score=329.91  Aligned_cols=247  Identities=28%  Similarity=0.427  Sum_probs=219.3

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhH-HHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETE-LNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      ..++++||++|||||++|||+++|++|+++|++|++++|+.+. .+...+++...+.++.++.+|++++++++++++++.
T Consensus        23 ~~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  102 (283)
T 1g0o_A           23 QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAV  102 (283)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999999998764 556667777777789999999999999999999999


Q ss_pred             HHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCC-Chhhh
Q 024230           93 SLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANV-GTVYS  171 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~-~~~y~  171 (270)
                      +.+ +++|+||||||.....++.+.+.++|++++++|+.++++++++++|+|  ++.|+||++||..+..+.+. ...|+
T Consensus       103 ~~~-g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~--~~~g~iv~isS~~~~~~~~~~~~~Y~  179 (283)
T 1g0o_A          103 KIF-GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHL--EIGGRLILMGSITGQAKAVPKHAVYS  179 (283)
T ss_dssp             HHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHS--CTTCEEEEECCGGGTCSSCSSCHHHH
T ss_pred             HHc-CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH--hcCCeEEEEechhhccCCCCCCcchH
Confidence            988 799999999999877888899999999999999999999999999999  34689999999999887664 88999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC---------ChhhHHHHhh--cCCCCCCCChHhHHHHH
Q 024230          172 ATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG---------NGKFVDEVKS--RTPMGRLGEPKEVSSLV  240 (270)
Q Consensus       172 ~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~---------~~~~~~~~~~--~~~~~~~~~~~dva~~~  240 (270)
                      +||+++++|+++++.|++++||+|++|+||+++|++......         .....+.+..  ..|.+++.+|+|+++++
T Consensus       180 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v  259 (283)
T 1g0o_A          180 GSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVV  259 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCCCCCcCHHHHHHHH
Confidence            999999999999999999999999999999999997544311         1223344444  67889999999999999


Q ss_pred             HHHhCCCCCCccCcEEeecCCcc
Q 024230          241 AFLCMPAASYITGQTVCIDGGFT  263 (270)
Q Consensus       241 ~~l~s~~~~~~~G~~i~vdgG~~  263 (270)
                      +||+++.++++||+++.+|||++
T Consensus       260 ~~l~s~~~~~itG~~i~vdgG~~  282 (283)
T 1g0o_A          260 CFLASNDGGWVTGKVIGIDGGAC  282 (283)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTCC
T ss_pred             HHHhCccccCcCCCEEEeCCCcc
Confidence            99999989999999999999975

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=6.9e-48  Score=325.77  Aligned_cols=244  Identities=27%  Similarity=0.421  Sum_probs=217.0

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+++. ++..+++.    + .++.+|++|+++++++++++.+.+
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~----~-~~~~~D~~~~~~~~~~~~~~~~~~   75 (256)
T 2d1y_A            2 GLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG----G-AFFQVDLEDERERVRFVEEAAYAL   75 (256)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT----C-EEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh----C-CEEEeeCCCHHHHHHHHHHHHHHc
Confidence            56899999999999999999999999999999999999887 66655553    3 778999999999999999999988


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKG  175 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKa  175 (270)
                       +++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||..+..+.++...|++||+
T Consensus        76 -g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  154 (256)
T 2d1y_A           76 -GRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKG  154 (256)
T ss_dssp             -SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCChhHHHHHH
Confidence             7999999999998888888999999999999999999999999999999888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEecCcccCCCCccc----cCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCc
Q 024230          176 AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPL----LGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI  251 (270)
Q Consensus       176 al~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  251 (270)
                      ++++|+++++.|++++||+|++|+||+++|++....    ...+...+.+....|.+++.+|+|++++++||+++.++++
T Consensus       155 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~s~~~~~~  234 (256)
T 2d1y_A          155 GLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFI  234 (256)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCC
Confidence            999999999999999999999999999999876442    1112222334455678889999999999999999988999


Q ss_pred             cCcEEeecCCccccc
Q 024230          252 TGQTVCIDGGFTVNG  266 (270)
Q Consensus       252 ~G~~i~vdgG~~~~~  266 (270)
                      +|+++.+|||+.+..
T Consensus       235 ~G~~~~v~gG~~~~~  249 (256)
T 2d1y_A          235 TGAILPVDGGMTASF  249 (256)
T ss_dssp             CSCEEEESTTGGGBC
T ss_pred             CCCEEEECCCccccc
Confidence            999999999988754

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=1.8e-47  Score=328.55  Aligned_cols=246  Identities=23%  Similarity=0.304  Sum_probs=215.5

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh-hHHHHHHHHHH-hcCCeEEEEEccCCC----HHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTE-TELNECIHHLQ-MKGLKVTGSVCDVSS----RPQRQTLI   88 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~-~~~~~~~~~~~-~~~~~~~~~~~D~~~----~~~~~~~~   88 (270)
                      .++|+||++|||||++|||+++|++|+++|++|++++|++ +.++++.+++. ..+.++.++.+|+++    ++++++++
T Consensus        18 ~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~   97 (288)
T 2x9g_A           18 GSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEII   97 (288)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHH
Confidence            4578999999999999999999999999999999999998 78888888776 556789999999999    99999999


Q ss_pred             HHHHHHcCCcccEEEECCCCCCCCCC-----CC-----CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC------CcEE
Q 024230           89 NTVSSLFNGKLNIFVNNVGTSVLKPT-----LE-----YNAEDFSLVMSTNFESAFHLCQLAHPLLRASG------AASI  152 (270)
Q Consensus        89 ~~i~~~~~~~id~li~~ag~~~~~~~-----~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~------~g~i  152 (270)
                      +++.+.+ +++|+||||||.....++     .+     .+.++|++.+++|+.+++.++++++|+|.+++      .|+|
T Consensus        98 ~~~~~~~-g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~i  176 (288)
T 2x9g_A           98 NSCFRAF-GRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSI  176 (288)
T ss_dssp             HHHHHHH-SCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEE
T ss_pred             HHHHHhc-CCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEE
Confidence            9999988 799999999998776676     66     88899999999999999999999999998766      6899


Q ss_pred             EEecCccccccCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCC-C
Q 024230          153 VLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRL-G  231 (270)
Q Consensus       153 i~iss~~~~~~~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~  231 (270)
                      |++||..+..+.++...|++||+++++|+++++.|++++||+|++|+||+++|++ . .  .+.....+....|.++. .
T Consensus       177 v~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~--~~~~~~~~~~~~p~~r~~~  252 (288)
T 2x9g_A          177 VNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-M--GEEEKDKWRRKVPLGRREA  252 (288)
T ss_dssp             EEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-S--CHHHHHHHHHTCTTTSSCC
T ss_pred             EEEecccccCCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-c--ChHHHHHHHhhCCCCCCCC
Confidence            9999999999999999999999999999999999999999999999999999998 3 2  12333445556788888 9


Q ss_pred             ChHhHHHHHHHHhCCCCCCccCcEEeecCCcccc
Q 024230          232 EPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       232 ~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                      +|+|++++++||+++.++++||+++.+|||+.+.
T Consensus       253 ~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~  286 (288)
T 2x9g_A          253 SAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLV  286 (288)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             CHHHHHHHHHHHhCccccCccCCEEEECcchhhh
Confidence            9999999999999999999999999999998754

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=2.3e-48  Score=333.64  Aligned_cols=246  Identities=25%  Similarity=0.338  Sum_probs=214.7

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCC------------hhHHHHHHHHHHhcCCeEEEEEccCCCHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRT------------ETELNECIHHLQMKGLKVTGSVCDVSSRP   82 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~------------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   82 (270)
                      +.+|+||++|||||++|||+++|++|+++|++|++++|+            .+.+++...++...+.++.++.+|++|++
T Consensus         5 m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   84 (287)
T 3pxx_A            5 MGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRA   84 (287)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHH
T ss_pred             ccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHH
Confidence            568999999999999999999999999999999999998            67777778888777889999999999999


Q ss_pred             HHHHHHHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccc
Q 024230           83 QRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIV  162 (270)
Q Consensus        83 ~~~~~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~  162 (270)
                      +++++++++.+.+ +++|+||||||.....  .+.+.++|++.+++|+.++++++++++|+|  .+.|+||++||..+..
T Consensus        85 ~v~~~~~~~~~~~-g~id~lv~nAg~~~~~--~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~--~~~g~iv~isS~~~~~  159 (287)
T 3pxx_A           85 AVSRELANAVAEF-GKLDVVVANAGICPLG--AHLPVQAFADAFDVDFVGVINTVHAALPYL--TSGASIITTGSVAGLI  159 (287)
T ss_dssp             HHHHHHHHHHHHH-SCCCEEEECCCCCCCC--TTCCTHHHHHHHHHHTHHHHHHHHHHGGGC--CTTCEEEEECCHHHHH
T ss_pred             HHHHHHHHHHHHc-CCCCEEEECCCcCccc--CcCCHHHHHHHhhhhhhhhHHHHHHHHHHh--hcCcEEEEeccchhcc
Confidence            9999999999998 7999999999987654  347899999999999999999999999999  3458999999999887


Q ss_pred             cC-----------CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCcccc------C---ChhhHH---
Q 024230          163 SA-----------NVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLL------G---NGKFVD---  219 (270)
Q Consensus       163 ~~-----------~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~------~---~~~~~~---  219 (270)
                      +.           ++...|++||+++++|+++++.|++++||+||+|+||+++|+|.....      .   .+...+   
T Consensus       160 ~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (287)
T 3pxx_A          160 AAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALL  239 (287)
T ss_dssp             HHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHH
T ss_pred             cccccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHHHh
Confidence            65           667789999999999999999999999999999999999999976421      0   111111   


Q ss_pred             H--HhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCccccc
Q 024230          220 E--VKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       220 ~--~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                      .  .....+ +++.+|+|++++++||+|+.++++||++|.||||+++.+
T Consensus       240 ~~~~~~~~~-~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~~~  287 (287)
T 3pxx_A          240 AFPAMQAMP-TPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAMLKF  287 (287)
T ss_dssp             HGGGGCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGGC
T ss_pred             hhhhhcccC-CCCCCHHHHHhhHheecchhhcCCCCceEeECchhhhcC
Confidence            1  222334 788999999999999999999999999999999998753

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=9.1e-49  Score=333.00  Aligned_cols=240  Identities=31%  Similarity=0.485  Sum_probs=214.1

Q ss_pred             cccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           13 QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        13 ~~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      ..+++|+||++|||||++|||+++|++|+++|++|++++|+.+..+           ....+.+|+++.++++++++++.
T Consensus        21 ~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~-----------~~~~~~~Dv~~~~~~~~~~~~~~   89 (266)
T 3uxy_A           21 QSMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA-----------ADLHLPGDLREAAYADGLPGAVA   89 (266)
T ss_dssp             -----CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC-----------CSEECCCCTTSHHHHHHHHHHHH
T ss_pred             hhhhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-----------hhhccCcCCCCHHHHHHHHHHHH
Confidence            3467899999999999999999999999999999999999876532           12345899999999999999999


Q ss_pred             HHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhh
Q 024230           93 SLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSA  172 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~  172 (270)
                      +.+ +++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||..++.+.++...|++
T Consensus        90 ~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~a  168 (266)
T 3uxy_A           90 AGL-GRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCL  168 (266)
T ss_dssp             HHH-SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTTBHHHHH
T ss_pred             Hhc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCChHHHH
Confidence            998 8999999999998888899999999999999999999999999999999988899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC-----ChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCC
Q 024230          173 TKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG-----NGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA  247 (270)
Q Consensus       173 sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (270)
                      ||+|+++|+++++.|++++||+|++|+||+++|++......     .....+.+....|.+++.+|+|+|++++||+++.
T Consensus       169 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~  248 (266)
T 3uxy_A          169 TKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLASDA  248 (266)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence            99999999999999999999999999999999998654321     1223355667789999999999999999999999


Q ss_pred             CCCccCcEEeecCCccc
Q 024230          248 ASYITGQTVCIDGGFTV  264 (270)
Q Consensus       248 ~~~~~G~~i~vdgG~~~  264 (270)
                      ++++||++|.+|||+++
T Consensus       249 ~~~itG~~i~vdGG~~~  265 (266)
T 3uxy_A          249 ARYLCGSLVEVNGGKAV  265 (266)
T ss_dssp             GTTCCSCEEEESTTCCC
T ss_pred             hcCCcCCEEEECcCEeC
Confidence            99999999999999875

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.4e-48  Score=335.21  Aligned_cols=251  Identities=21%  Similarity=0.279  Sum_probs=223.7

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCC---eEEEeeCChhHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGA---TVHTCSRTETELNECIHHLQMK--GLKVTGSVCDVSSRPQRQTLIN   89 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~---~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~   89 (270)
                      +.+|+||++|||||++|||+++|++|+++|+   +|++++|+.+.++++.+++...  +.++.++.+|++|+++++++++
T Consensus        28 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~  107 (287)
T 3rku_A           28 AERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIE  107 (287)
T ss_dssp             HHHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHH
T ss_pred             hhhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHH
Confidence            4579999999999999999999999999998   9999999999999988888764  6789999999999999999999


Q ss_pred             HHHHHcCCcccEEEECCCCCC-CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCCh
Q 024230           90 TVSSLFNGKLNIFVNNVGTSV-LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGT  168 (270)
Q Consensus        90 ~i~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~  168 (270)
                      ++.+.+ +++|+||||||... ..++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.++..
T Consensus       108 ~~~~~~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~  186 (287)
T 3rku_A          108 NLPQEF-KDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGS  186 (287)
T ss_dssp             TSCGGG-CSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCH
T ss_pred             HHHHhc-CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCCCc
Confidence            999988 79999999999865 6788899999999999999999999999999999988889999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC-ChhhH-HHHhhcCCCCCCCChHhHHHHHHHHhCC
Q 024230          169 VYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG-NGKFV-DEVKSRTPMGRLGEPKEVSSLVAFLCMP  246 (270)
Q Consensus       169 ~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (270)
                      .|++||+|+++|+++++.|++++||+|++|+||+++|++...... ..... ......    ...+|+|+|++++||+++
T Consensus       187 ~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~----~p~~pedvA~~v~~l~s~  262 (287)
T 3rku_A          187 IYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKDT----TPLMADDVADLIVYATSR  262 (287)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTTS----CCEEHHHHHHHHHHHHTS
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhccc----CCCCHHHHHHHHHHHhCC
Confidence            999999999999999999999999999999999999997543221 11111 122222    234899999999999999


Q ss_pred             CCCCccCcEEeecCCccccccccC
Q 024230          247 AASYITGQTVCIDGGFTVNGFFFS  270 (270)
Q Consensus       247 ~~~~~~G~~i~vdgG~~~~~~~~~  270 (270)
                      .+.+++|+++.+|||.......|+
T Consensus       263 ~~~~i~g~~i~v~~g~~~p~~~~r  286 (287)
T 3rku_A          263 KQNTVIADTLIFPTNQASPHHIFR  286 (287)
T ss_dssp             CTTEEEEEEEEEETTEEETTEECC
T ss_pred             CCCeEecceEEeeCCCCCCccccc
Confidence            999999999999999998776664

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=9.1e-48  Score=324.37  Aligned_cols=246  Identities=27%  Similarity=0.386  Sum_probs=226.2

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEe-eCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTC-SRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      .++||+++||||++|||+++|++|+++|++|+++ .|+.+..++..++++..+.++.++.+|+++.++++++++++.+.+
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNEL   83 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHh
Confidence            4789999999999999999999999999999885 777888888888888888899999999999999999999998776


Q ss_pred             C-----CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhh
Q 024230           96 N-----GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVY  170 (270)
Q Consensus        96 ~-----~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y  170 (270)
                      +     +++|++|||||.....++.+.+.++|++++++|+.+++.++++++|+|++  .++||++||..+..+.+....|
T Consensus        84 ~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~Y  161 (255)
T 3icc_A           84 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD--NSRIINISSAATRISLPDFIAY  161 (255)
T ss_dssp             HHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEECCGGGTSCCTTBHHH
T ss_pred             cccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCC--CCEEEEeCChhhccCCCCcchh
Confidence            2     24999999999988888889999999999999999999999999999843  5799999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCC
Q 024230          171 SATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY  250 (270)
Q Consensus       171 ~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  250 (270)
                      ++||+|+++|+++++.|++++||+|++|+||+++|+|.......+..........+.++..+|+|++++++||+++.+++
T Consensus       162 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  241 (255)
T 3icc_A          162 SMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSRW  241 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCCcCCCCCHHHHHHHHHHHhCcccCC
Confidence            99999999999999999999999999999999999999887666656666777788999999999999999999999999


Q ss_pred             ccCcEEeecCCccc
Q 024230          251 ITGQTVCIDGGFTV  264 (270)
Q Consensus       251 ~~G~~i~vdgG~~~  264 (270)
                      +||+++.+|||+++
T Consensus       242 ~tG~~i~vdgG~~l  255 (255)
T 3icc_A          242 VTGQLIDVSGGSCL  255 (255)
T ss_dssp             CCSCEEEESSSTTC
T ss_pred             ccCCEEEecCCeeC
Confidence            99999999999864

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=7.6e-48  Score=326.65  Aligned_cols=250  Identities=24%  Similarity=0.348  Sum_probs=212.0

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhH-HHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETE-LNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      +++.+|+++||||++|||+++|++|+++|++|++++|+.+. .+...+.+...+.++.++.+|++|+++++++++++.+.
T Consensus         3 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   82 (264)
T 3i4f_A            3 LGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSH   82 (264)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            56778999999999999999999999999999999776554 44555555555678999999999999999999999999


Q ss_pred             cCCcccEEEECCC--CCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCc-cc-cccCCCChhh
Q 024230           95 FNGKLNIFVNNVG--TSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSA-LG-IVSANVGTVY  170 (270)
Q Consensus        95 ~~~~id~li~~ag--~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~-~~-~~~~~~~~~y  170 (270)
                      + +++|++|||||  .....++.+.+.++|++.+++|+.+++.++++++|+|++++.++||++||. .+ ..+.++...|
T Consensus        83 ~-g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y  161 (264)
T 3i4f_A           83 F-GKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAF  161 (264)
T ss_dssp             H-SCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCTTCHHH
T ss_pred             h-CCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCCCCchh
Confidence            8 79999999999  555677889999999999999999999999999999999888999999998 43 4566778899


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCC
Q 024230          171 SATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY  250 (270)
Q Consensus       171 ~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  250 (270)
                      ++||+|+++|+++++.|++++||+|++|+||+++|++.....  +...+......|.++..+|+|++++++||+++.+++
T Consensus       162 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~~  239 (264)
T 3i4f_A          162 AAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATI--QEARQLKEHNTPIGRSGTGEDIARTISFLCEDDSDM  239 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCH--HHHHHC--------CCCCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhcc--HHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcccCC
Confidence            999999999999999999999999999999999999876653  233334455678899999999999999999999999


Q ss_pred             ccCcEEeecCCccccccc
Q 024230          251 ITGQTVCIDGGFTVNGFF  268 (270)
Q Consensus       251 ~~G~~i~vdgG~~~~~~~  268 (270)
                      +||++|.+|||++..+.+
T Consensus       240 itG~~i~vdGG~~~~~~~  257 (264)
T 3i4f_A          240 ITGTIIEVTGAVDVIHRE  257 (264)
T ss_dssp             CCSCEEEESCSCCCCC--
T ss_pred             CCCcEEEEcCceeeccCC
Confidence            999999999999988764

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=3.3e-47  Score=332.58  Aligned_cols=244  Identities=26%  Similarity=0.321  Sum_probs=220.6

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEee-CChhHHHHHHHHHH-hcCCeEEEEEccCCCHH------------
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCS-RTETELNECIHHLQ-MKGLKVTGSVCDVSSRP------------   82 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~-r~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------   82 (270)
                      +|++|++|||||++|||+++|++|+++|++|++++ |+++.++++.+++. ..+.++.++.+|+++++            
T Consensus        43 ~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~  122 (328)
T 2qhx_A           43 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAP  122 (328)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CC
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccccc
Confidence            48999999999999999999999999999999999 99998888888886 45678999999999999            


Q ss_pred             -----HHHHHHHHHHHHcCCcccEEEECCCCCCCCCCCCCC--------------HHHHHHHHHHhhHHHHHHHHHHHHH
Q 024230           83 -----QRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYN--------------AEDFSLVMSTNFESAFHLCQLAHPL  143 (270)
Q Consensus        83 -----~~~~~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~~~~~  143 (270)
                           +++++++++.+.+ +++|+||||||.....++.+.+              .++|++++++|+.+++.++++++|+
T Consensus       123 ~~~~~~v~~~~~~~~~~~-g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  201 (328)
T 2qhx_A          123 VTLFTRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHR  201 (328)
T ss_dssp             BCHHHHHHHHHHHHHHHH-SCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHhc-CCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                 9999999999998 8999999999998777888888              9999999999999999999999999


Q ss_pred             HHhcC------CcEEEEecCccccccCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhh
Q 024230          144 LRASG------AASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKF  217 (270)
Q Consensus       144 m~~~~------~g~ii~iss~~~~~~~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~  217 (270)
                      |.+++      .|+||++||..+..+.++...|++||+++++|+++++.|++++||+|++|+||+++|++ ...   +..
T Consensus       202 m~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~~---~~~  277 (328)
T 2qhx_A          202 VAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DMP---PAV  277 (328)
T ss_dssp             HHHSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CSC---HHH
T ss_pred             HHhcCCcCCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-ccc---HHH
Confidence            98876      78999999999999999999999999999999999999999999999999999999998 332   344


Q ss_pred             HHHHhhcCCCC-CCCChHhHHHHHHHHhCCCCCCccCcEEeecCCcccc
Q 024230          218 VDEVKSRTPMG-RLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       218 ~~~~~~~~~~~-~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                      .+.+....|.+ ++.+|+|+|++++||+++.++++||++|.+|||+.+.
T Consensus       278 ~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~  326 (328)
T 2qhx_A          278 WEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  326 (328)
T ss_dssp             HHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHhhCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCcccC
Confidence            45555667888 8999999999999999998999999999999998764

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=7.7e-48  Score=329.59  Aligned_cols=248  Identities=27%  Similarity=0.417  Sum_probs=220.9

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCC---eEEEEEccCCCHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGL---KVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+++.+++..+++...+.   ++.++.+|++|+++++++++++.
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   81 (280)
T 1xkq_A            2 PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTL   81 (280)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHH
Confidence            358899999999999999999999999999999999999988888888876655   79999999999999999999999


Q ss_pred             HHcCCcccEEEECCCCCCCCC----CCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC-CCC
Q 024230           93 SLFNGKLNIFVNNVGTSVLKP----TLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA-NVG  167 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~-~~~  167 (270)
                      +.+ +++|+||||||.....+    +.+.+.++|++.+++|+.+++.++++++|+|.+++ |+||++||..+..+. ++.
T Consensus        82 ~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~  159 (280)
T 1xkq_A           82 KQF-GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDF  159 (280)
T ss_dssp             HHH-SCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCSS
T ss_pred             Hhc-CCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCCCCcc
Confidence            998 79999999999876666    77889999999999999999999999999998776 999999999998887 888


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC-------hhhHHHHhhcCCCCCCCChHhHHHHH
Q 024230          168 TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN-------GKFVDEVKSRTPMGRLGEPKEVSSLV  240 (270)
Q Consensus       168 ~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~dva~~~  240 (270)
                      ..|++||+++++|+++++.|++++||+|++|+||+++|++.......       ....+.+....|.+++.+|+|+|+++
T Consensus       160 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v  239 (280)
T 1xkq_A          160 LYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANII  239 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCCCCCCCCHHHHHHHH
Confidence            99999999999999999999999999999999999999986543111       11222333446788999999999999


Q ss_pred             HHHhCCC-CCCccCcEEeecCCcccc
Q 024230          241 AFLCMPA-ASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       241 ~~l~s~~-~~~~~G~~i~vdgG~~~~  265 (270)
                      +||+++. +++++|+++.+|||+.+.
T Consensus       240 ~~l~s~~~~~~~tG~~i~vdgG~~~~  265 (280)
T 1xkq_A          240 LFLADRNLSFYILGQSIVADGGTSLV  265 (280)
T ss_dssp             HHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             HHhcCcccccCccCCeEEECCCcccc
Confidence            9999987 889999999999998753

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=8.3e-48  Score=324.74  Aligned_cols=245  Identities=32%  Similarity=0.381  Sum_probs=220.2

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++.+++..+++   +.++.++.+|++|+++++++++++.+.+ 
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~-   78 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRL-   78 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHc-
Confidence            578999999999999999999999999999999999998887776665   5678899999999999999999999988 


Q ss_pred             CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHH
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGA  176 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaa  176 (270)
                      +++|++|||||.....++.+.+.++|++++++|+.+++.++++++|+|++++ ++||++||..++.+.++...|++||++
T Consensus        79 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~~sK~a  157 (253)
T 1hxh_A           79 GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAA  157 (253)
T ss_dssp             CSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCCCCccHHHHHHH
Confidence            8999999999998778889999999999999999999999999999998877 999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccC--CceEEEEecCcccCCCCccccCChhhHHH-Hhh---cCCCCCCCChHhHHHHHHHHhCCCCCC
Q 024230          177 MNQLAKNLACEWAKD--NIRTNSVAPWYIRTPFTEPLLGNGKFVDE-VKS---RTPMGRLGEPKEVSSLVAFLCMPAASY  250 (270)
Q Consensus       177 l~~~~~sla~el~~~--~i~v~~v~pG~v~t~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~dva~~~~~l~s~~~~~  250 (270)
                      +++|+++++.|++++  ||+|++|+||+++|++...... +...+. +..   ..|.+++.+|+|+|++++||+++.+++
T Consensus       158 ~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~  236 (253)
T 1hxh_A          158 VSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLP-KGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSV  236 (253)
T ss_dssp             HHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSC-TTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccc-hhhhHHHHhhhhccCccCCCCCHHHHHHHHHHHcCccccC
Confidence            999999999999998  9999999999999998654221 122222 333   457788899999999999999998999


Q ss_pred             ccCcEEeecCCcccccc
Q 024230          251 ITGQTVCIDGGFTVNGF  267 (270)
Q Consensus       251 ~~G~~i~vdgG~~~~~~  267 (270)
                      ++|+++.+|||+...++
T Consensus       237 ~tG~~~~vdgG~~~~~~  253 (253)
T 1hxh_A          237 MSGSELHADNSILGMGL  253 (253)
T ss_dssp             CCSCEEEESSSCTTTTC
T ss_pred             CCCcEEEECCCccccCC
Confidence            99999999999987653

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=7.1e-48  Score=330.68  Aligned_cols=241  Identities=20%  Similarity=0.297  Sum_probs=219.1

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChh-------HHHHHHHHHHhcCCeEEEEEccCCCHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTET-------ELNECIHHLQMKGLKVTGSVCDVSSRPQRQTL   87 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~-------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   87 (270)
                      .|+|+||++|||||++|||+++|++|+++|++|++++|+.+       .+++..+++...+.++.++.+|++|+++++++
T Consensus         4 ~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   83 (285)
T 3sc4_A            4 SMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAA   83 (285)
T ss_dssp             --CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            46799999999999999999999999999999999999987       46677777877788999999999999999999


Q ss_pred             HHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC-CC
Q 024230           88 INTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA-NV  166 (270)
Q Consensus        88 ~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~-~~  166 (270)
                      ++++.+.+ +++|+||||||.....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+. ++
T Consensus        84 ~~~~~~~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~  162 (285)
T 3sc4_A           84 VAKTVEQF-GGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLR  162 (285)
T ss_dssp             HHHHHHHH-SCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGSC
T ss_pred             HHHHHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCCC
Confidence            99999998 79999999999998889999999999999999999999999999999998888999999999998886 77


Q ss_pred             ChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecC-cccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhC
Q 024230          167 GTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPW-YIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCM  245 (270)
Q Consensus       167 ~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (270)
                      ...|++||+|+++|+++++.|++++||+||+|+|| ++.|++....         .....+.++..+|+|++++++||++
T Consensus       163 ~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~~---------~~~~~~~~r~~~pedvA~~~~~l~s  233 (285)
T 3sc4_A          163 PTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQNL---------LGGDEAMARSRKPEVYADAAYVVLN  233 (285)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHHH---------HTSCCCCTTCBCTHHHHHHHHHHHT
T ss_pred             CchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHhh---------ccccccccCCCCHHHHHHHHHHHhC
Confidence            89999999999999999999999999999999999 6888764332         2334567889999999999999999


Q ss_pred             CCCCCccCcEEeecCCccccc
Q 024230          246 PAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       246 ~~~~~~~G~~i~vdgG~~~~~  266 (270)
                      +.+ ++||+++.+|||+...+
T Consensus       234 ~~~-~~tG~~i~~dgg~~~~g  253 (285)
T 3sc4_A          234 KPS-SYTGNTLLCEDVLLESG  253 (285)
T ss_dssp             SCT-TCCSCEEEHHHHHHHHT
T ss_pred             Ccc-cccceEEEEcCchhccC
Confidence            988 99999999999987654

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.8e-47  Score=321.68  Aligned_cols=241  Identities=22%  Similarity=0.280  Sum_probs=215.0

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCC--CeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLG--ATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G--~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      ||++|||||++|||+++|++|+++|  +.|++++|+++.++++.+++   +.++.++.+|++|+++++++++++.+.+ +
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   77 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY---GDRFFYVVGDITEDSVLKQLVNAAVKGH-G   77 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH---GGGEEEEESCTTSHHHHHHHHHHHHHHH-S
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh---CCceEEEECCCCCHHHHHHHHHHHHHhc-C
Confidence            7999999999999999999999995  68999999999888777665   4579999999999999999999999998 8


Q ss_pred             cccEEEECCCCCC-CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHH
Q 024230           98 KLNIFVNNVGTSV-LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGA  176 (270)
Q Consensus        98 ~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaa  176 (270)
                      ++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++++ |+||++||..+..+.++...|++||++
T Consensus        78 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a  156 (254)
T 3kzv_A           78 KIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYFSSWGAYGSSKAA  156 (254)
T ss_dssp             CCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSSCCSHHHHHHHHH
T ss_pred             CccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCCCCcchHHHHHHH
Confidence            9999999999854 47888999999999999999999999999999998876 999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC-------ChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCC-C
Q 024230          177 MNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG-------NGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA-A  248 (270)
Q Consensus       177 l~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~-~  248 (270)
                      +++|+++++.|+  .||+|++|+||+++|+|...+..       .+...+.+....|.+++.+|+|++++++||+++. +
T Consensus       157 ~~~~~~~la~e~--~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~L~s~~~~  234 (254)
T 3kzv_A          157 LNHFAMTLANEE--RQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKLALHGIP  234 (254)
T ss_dssp             HHHHHHHHHHHC--TTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC----CHHHHHHHHHHHHHCCC
T ss_pred             HHHHHHHHHhhc--cCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhcCCcCCcccHHHHHHHHHhhccc
Confidence            999999999998  68999999999999999876543       2344555666778999999999999999999998 5


Q ss_pred             CCccCcEEeecCCcccccc
Q 024230          249 SYITGQTVCIDGGFTVNGF  267 (270)
Q Consensus       249 ~~~~G~~i~vdgG~~~~~~  267 (270)
                      +++||+++.+|||....+.
T Consensus       235 ~~itG~~i~vdg~~~~~~~  253 (254)
T 3kzv_A          235 DGVNGQYLSYNDPALADFM  253 (254)
T ss_dssp             GGGTTCEEETTCGGGGGGC
T ss_pred             CCCCccEEEecCccccccC
Confidence            9999999999999987664

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=6.8e-48  Score=325.48  Aligned_cols=243  Identities=31%  Similarity=0.411  Sum_probs=217.3

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++.+++..+++   +.++.++.+|++++++++++++++.+.+ 
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   77 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEF-   77 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEecCCCHHHHHHHHHHHHHHc-
Confidence            478999999999999999999999999999999999998877766554   4578889999999999999999999998 


Q ss_pred             CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHH
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGA  176 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaa  176 (270)
                      +++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||..+..+.++...|++||++
T Consensus        78 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a  157 (254)
T 1hdc_A           78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWG  157 (254)
T ss_dssp             SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCchhHHHHHHH
Confidence            79999999999987778889999999999999999999999999999998878999999999999998999999999999


Q ss_pred             HHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCC-ChHhHHHHHHHHhCCCCCCccCcE
Q 024230          177 MNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLG-EPKEVSSLVAFLCMPAASYITGQT  255 (270)
Q Consensus       177 l~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~dva~~~~~l~s~~~~~~~G~~  255 (270)
                      +++|+++++.|++++||+|++|+||+++|++......  ...+.+....|.+++. +|+|+|+.++||+++.+++++|++
T Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~p~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~  235 (254)
T 1hdc_A          158 VRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGI--RQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAE  235 (254)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTC--CCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEecccCcCccccccch--hHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCCCCCE
Confidence            9999999999999999999999999999987644211  1111222345677888 999999999999999889999999


Q ss_pred             EeecCCcccc
Q 024230          256 VCIDGGFTVN  265 (270)
Q Consensus       256 i~vdgG~~~~  265 (270)
                      +.+|||+...
T Consensus       236 ~~vdgG~~~~  245 (254)
T 1hdc_A          236 LAVDGGWTTG  245 (254)
T ss_dssp             EEESTTTTTS
T ss_pred             EEECCCcccc
Confidence            9999998764

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=9.6e-48  Score=326.90  Aligned_cols=248  Identities=21%  Similarity=0.215  Sum_probs=217.6

Q ss_pred             cCCCCCCEEEEecCC--CcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGT--KGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        15 ~~~l~gk~vlItG~s--~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      ...+++|+||||||+  +|||+++|++|+++|++|++++|+.+..+.. +++.....++.++.+|++|+++++++++++.
T Consensus         9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   87 (271)
T 3ek2_A            9 MGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRI-TEFAAEFGSELVFPCDVADDAQIDALFASLK   87 (271)
T ss_dssp             CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHHHHHTTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHH-HHHHHHcCCcEEEECCCCCHHHHHHHHHHHH
Confidence            568899999999999  9999999999999999999999996554443 3343334468899999999999999999999


Q ss_pred             HHcCCcccEEEECCCCCCC----CCCCC-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCC
Q 024230           93 SLFNGKLNIFVNNVGTSVL----KPTLE-YNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG  167 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~~----~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~  167 (270)
                      +.+ +++|++|||||....    .++.+ .+.++|++.+++|+.+++.++++++|+|++  .|+||++||..+..+.++.
T Consensus        88 ~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~  164 (271)
T 3ek2_A           88 THW-DSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD--DASLLTLSYLGAERAIPNY  164 (271)
T ss_dssp             HHC-SCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTT
T ss_pred             HHc-CCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc--CceEEEEeccccccCCCCc
Confidence            998 899999999998764    56666 999999999999999999999999999974  5799999999999999999


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCC
Q 024230          168 TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA  247 (270)
Q Consensus       168 ~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (270)
                      ..|++||+|+++|+++++.|++++||+|++|+||+++|+|...+...+...+......+.++..+|+|+++.++||+++.
T Consensus       165 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pedva~~i~~l~s~~  244 (271)
T 3ek2_A          165 NTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTIEQVGNAGAFLLSDL  244 (271)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGG
T ss_pred             cchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCcc
Confidence            99999999999999999999999999999999999999998776544556666777889999999999999999999999


Q ss_pred             CCCccCcEEeecCCccccc
Q 024230          248 ASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       248 ~~~~~G~~i~vdgG~~~~~  266 (270)
                      ++++||++|.+|||+.+.-
T Consensus       245 ~~~~tG~~i~vdgG~~~~~  263 (271)
T 3ek2_A          245 ASGVTAEVMHVDSGFNAVV  263 (271)
T ss_dssp             GTTCCSEEEEESTTGGGBC
T ss_pred             cCCeeeeEEEECCCeeeeh
Confidence            9999999999999998764

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=1.1e-47  Score=324.25  Aligned_cols=245  Identities=27%  Similarity=0.455  Sum_probs=217.8

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++  ++..+++...+.++.++.+|++|+++++++++++.+.+ 
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-   77 (255)
T 2q2v_A            1 TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREF-   77 (255)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHc-
Confidence            478999999999999999999999999999999999876  45556666656788999999999999999999999998 


Q ss_pred             CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHH
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGA  176 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaa  176 (270)
                      +++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||..+..+.++...|++||++
T Consensus        78 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  157 (255)
T 2q2v_A           78 GGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHG  157 (255)
T ss_dssp             SSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCCchhHHHHHHH
Confidence            79999999999987788889999999999999999999999999999998878999999999999998999999999999


Q ss_pred             HHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC-Chhh---H----HHH-hhcCCCCCCCChHhHHHHHHHHhCCC
Q 024230          177 MNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG-NGKF---V----DEV-KSRTPMGRLGEPKEVSSLVAFLCMPA  247 (270)
Q Consensus       177 l~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~-~~~~---~----~~~-~~~~~~~~~~~~~dva~~~~~l~s~~  247 (270)
                      +++|+++++.|++++||+|++|+||+++|++...... ....   .    ..+ ....|.+++.+|+|++++++||+++.
T Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~  237 (255)
T 2q2v_A          158 VVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSEA  237 (255)
T ss_dssp             HHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCc
Confidence            9999999999999999999999999999997643210 0111   1    223 44567889999999999999999998


Q ss_pred             CCCccCcEEeecCCccc
Q 024230          248 ASYITGQTVCIDGGFTV  264 (270)
Q Consensus       248 ~~~~~G~~i~vdgG~~~  264 (270)
                      +++++|+++.+|||+++
T Consensus       238 ~~~~tG~~~~vdgG~~~  254 (255)
T 2q2v_A          238 GSQVRGAAWNVDGGWLA  254 (255)
T ss_dssp             GTTCCSCEEEESTTGGG
T ss_pred             cCCCCCCEEEECCCccC
Confidence            89999999999999865

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=3.3e-47  Score=324.32  Aligned_cols=244  Identities=26%  Similarity=0.337  Sum_probs=209.6

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEe-eCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTC-SRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      ..++|++|||||++|||+++|++|+++|++|+++ .|+.+..+++.+++...+.++.++.+|++|+++++++++++.+.+
T Consensus        23 m~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  102 (272)
T 4e3z_A           23 MSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQF  102 (272)
T ss_dssp             -CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            3468999999999999999999999999999776 788888888888888888899999999999999999999999998


Q ss_pred             CCcccEEEECCCCCCC-CCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc---CCcEEEEecCccccccCC-CChhh
Q 024230           96 NGKLNIFVNNVGTSVL-KPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRAS---GAASIVLMSSALGIVSAN-VGTVY  170 (270)
Q Consensus        96 ~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~---~~g~ii~iss~~~~~~~~-~~~~y  170 (270)
                       +++|++|||||.... .++.+.+.++|++++++|+.+++.++++++|.|.+.   +.|+||++||..+..+.+ ....|
T Consensus       103 -g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y  181 (272)
T 4e3z_A          103 -GRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDY  181 (272)
T ss_dssp             -SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCHHH
T ss_pred             -CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcchh
Confidence             799999999998764 778899999999999999999999999999999763   468999999999988766 66789


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCC
Q 024230          171 SATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY  250 (270)
Q Consensus       171 ~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  250 (270)
                      ++||+|+++|+++++.|++++||+|++|+||+++|++..... .+..........+.++..+|+|++++++||+++.+++
T Consensus       182 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~s~~~~~  260 (272)
T 4e3z_A          182 AASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGG-LPDRAREMAPSVPMQRAGMPEEVADAILYLLSPSASY  260 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------------CCTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccC-ChHHHHHHhhcCCcCCCcCHHHHHHHHHHHhCCcccc
Confidence            999999999999999999999999999999999999876522 2333445556678889999999999999999999999


Q ss_pred             ccCcEEeecCCc
Q 024230          251 ITGQTVCIDGGF  262 (270)
Q Consensus       251 ~~G~~i~vdgG~  262 (270)
                      ++|++|.+|||+
T Consensus       261 ~tG~~i~vdgG~  272 (272)
T 4e3z_A          261 VTGSILNVSGGR  272 (272)
T ss_dssp             CCSCEEEESTTC
T ss_pred             ccCCEEeecCCC
Confidence            999999999995

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=4.4e-48  Score=327.11  Aligned_cols=239  Identities=23%  Similarity=0.345  Sum_probs=201.3

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .|+|++|++|||||++|||+++|++|+++|++|++++|+.+...      +..+.++.++.+|++|+++++++++.+.+ 
T Consensus         4 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~------~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-   76 (257)
T 3tl3_A            4 SMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVV------ADLGDRARFAAADVTDEAAVASALDLAET-   76 (257)
T ss_dssp             ------CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHH------HHTCTTEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             cceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHH------HhcCCceEEEECCCCCHHHHHHHHHHHHH-
Confidence            47899999999999999999999999999999999999765432      22356799999999999999999998877 


Q ss_pred             cCCcccEEEECCCCCCCCC----CCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh--------cCCcEEEEecCccccc
Q 024230           95 FNGKLNIFVNNVGTSVLKP----TLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRA--------SGAASIVLMSSALGIV  162 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~--------~~~g~ii~iss~~~~~  162 (270)
                      + +++|++|||||.....+    ..+.+.++|++++++|+.+++.++++++|+|.+        ++.|+||++||..+..
T Consensus        77 ~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  155 (257)
T 3tl3_A           77 M-GTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFD  155 (257)
T ss_dssp             H-SCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--C
T ss_pred             h-CCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcC
Confidence            6 89999999999864332    235899999999999999999999999999988        5678999999999999


Q ss_pred             cCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCC-CCCCChHhHHHHHH
Q 024230          163 SANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPM-GRLGEPKEVSSLVA  241 (270)
Q Consensus       163 ~~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~  241 (270)
                      +.++...|++||+|+++|+++++.|++++||+|++|+||+++|+|....  .+...+.+....+. +++.+|+|++++++
T Consensus       156 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~r~~~p~dva~~v~  233 (257)
T 3tl3_A          156 GQIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASL--PEEARASLGKQVPHPSRLGNPDEYGALAV  233 (257)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC-----CHHHHHHHHHTSSSSCSCBCHHHHHHHHH
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhc--cHHHHHHHHhcCCCCCCccCHHHHHHHHH
Confidence            9888999999999999999999999999999999999999999998764  33444555666777 89999999999999


Q ss_pred             HHhCCCCCCccCcEEeecCCcccc
Q 024230          242 FLCMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       242 ~l~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                      ||+++  +++||++|.+|||+++.
T Consensus       234 ~l~s~--~~itG~~i~vdGG~~~~  255 (257)
T 3tl3_A          234 HIIEN--PMLNGEVIRLDGAIRMA  255 (257)
T ss_dssp             HHHHC--TTCCSCEEEESTTC---
T ss_pred             HHhcC--CCCCCCEEEECCCccCC
Confidence            99986  79999999999999865

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=1.1e-47  Score=327.59  Aligned_cols=236  Identities=22%  Similarity=0.305  Sum_probs=210.4

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhH-------HHHHHHHHHhcCCeEEEEEccCCCHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETE-------LNECIHHLQMKGLKVTGSVCDVSSRPQRQTLI   88 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   88 (270)
                      |+|+||++|||||++|||+++|++|+++|++|++++|+.+.       +++..+++...+.++.++.+|++|++++++++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   81 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAV   81 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence            68999999999999999999999999999999999998763       56667777777889999999999999999999


Q ss_pred             HHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccccc--CCC
Q 024230           89 NTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVS--ANV  166 (270)
Q Consensus        89 ~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~--~~~  166 (270)
                      +++.+.+ +++|++|||||.....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+  .++
T Consensus        82 ~~~~~~~-g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~  160 (274)
T 3e03_A           82 AATVDTF-GGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGA  160 (274)
T ss_dssp             HHHHHHH-SCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHHHHH
T ss_pred             HHHHHHc-CCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCCC
Confidence            9999998 8999999999998888889999999999999999999999999999999888899999999999887  677


Q ss_pred             ChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecC-cccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhC
Q 024230          167 GTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPW-YIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCM  245 (270)
Q Consensus       167 ~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (270)
                      ...|++||+|+++|+++++.|++++||+||+|+|| +++|+|.....           ..+..+..+|+|+|++++||++
T Consensus       161 ~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~~~-----------~~~~~~~~~pedvA~~v~~l~s  229 (274)
T 3e03_A          161 HTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINMLP-----------GVDAAACRRPEIMADAAHAVLT  229 (274)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC------------------CCCGGGSBCTHHHHHHHHHHHT
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhhcc-----------cccccccCCHHHHHHHHHHHhC
Confidence            88999999999999999999999999999999999 69999873321           1223346789999999999999


Q ss_pred             CCCCCccCcEEeecCCccc
Q 024230          246 PAASYITGQTVCIDGGFTV  264 (270)
Q Consensus       246 ~~~~~~~G~~i~vdgG~~~  264 (270)
                      +.++++||+++ +|||+..
T Consensus       230 ~~~~~itG~~i-~~~g~~~  247 (274)
T 3e03_A          230 REAAGFHGQFL-IDDEVLA  247 (274)
T ss_dssp             SCCTTCCSCEE-EHHHHHH
T ss_pred             ccccccCCeEE-EcCcchh
Confidence            99999999999 7877654

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-47  Score=325.50  Aligned_cols=243  Identities=30%  Similarity=0.416  Sum_probs=214.5

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      .+|++|+++||||++|||+++|++|+++|++|++++|+++.+++..+++   ..++.++.+|++|+++++++++++.+.+
T Consensus         2 ~~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~   78 (263)
T 2a4k_A            2 GRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL---EAEAIAVVADVSDPKAVEAVFAEALEEF   78 (263)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC---CSSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3588999999999999999999999999999999999998877665544   3578899999999999999999999998


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKG  175 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKa  175 (270)
                       +++|++|||||.....++.+.+.++|++++++|+.+++.+++++.|+| ++ .|+||++||..++ +.++...|++||+
T Consensus        79 -g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~-~g~iv~isS~~~~-~~~~~~~Y~asK~  154 (263)
T 2a4k_A           79 -GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE-GGSLVLTGSVAGL-GAFGLAHYAAGKL  154 (263)
T ss_dssp             -SCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT-TCEEEEECCCTTC-CHHHHHHHHHCSS
T ss_pred             -CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc-CCEEEEEecchhc-CCCCcHHHHHHHH
Confidence             899999999999888888899999999999999999999999999999 54 6899999999998 7778889999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcE
Q 024230          176 AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT  255 (270)
Q Consensus       176 al~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  255 (270)
                      ++++|+++++.|++++||+|++|+||+++|++...+  .+...+.+....|.++..+|+|+|+.++||+++.+++++|++
T Consensus       155 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~  232 (263)
T 2a4k_A          155 GVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGL--PPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQA  232 (263)
T ss_dssp             HHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS--CHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCCE
Confidence            999999999999999999999999999999987654  233344455667888999999999999999999899999999


Q ss_pred             EeecCCcccccc
Q 024230          256 VCIDGGFTVNGF  267 (270)
Q Consensus       256 i~vdgG~~~~~~  267 (270)
                      +.+|||+.+...
T Consensus       233 i~vdgG~~~~~~  244 (263)
T 2a4k_A          233 LYVDGGRSIVGP  244 (263)
T ss_dssp             EEESTTTTTC--
T ss_pred             EEECCCccccCC
Confidence            999999987643

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=2.8e-47  Score=320.98  Aligned_cols=239  Identities=26%  Similarity=0.352  Sum_probs=198.0

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      |+|++|+++||||++|||++++++|+++|++|++++|+++.        ...+  +.++.+|++|+++++++++++.+.+
T Consensus         3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~--------~~~~--~~~~~~D~~d~~~~~~~~~~~~~~~   72 (250)
T 2fwm_X            3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ--------EQYP--FATEVMDVADAAQVAQVCQRLLAET   72 (250)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS--------SCCS--SEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh--------hcCC--ceEEEcCCCCHHHHHHHHHHHHHHc
Confidence            67899999999999999999999999999999999998752        1112  7788999999999999999999998


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKG  175 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKa  175 (270)
                       +++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||..+..+.++...|++||+
T Consensus        73 -g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  151 (250)
T 2fwm_X           73 -ERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKA  151 (250)
T ss_dssp             -SCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             -CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCCchHHHHHH
Confidence             7999999999998888888999999999999999999999999999999888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHH-HHhh-------cCCCCCCCChHhHHHHHHHHhCCC
Q 024230          176 AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVD-EVKS-------RTPMGRLGEPKEVSSLVAFLCMPA  247 (270)
Q Consensus       176 al~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~-~~~~-------~~~~~~~~~~~dva~~~~~l~s~~  247 (270)
                      ++++|+++++.|++++||+|++|+||+++|++...........+ .+..       ..|.++..+|+|+|++++||+++.
T Consensus       152 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~  231 (250)
T 2fwm_X          152 ALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASDL  231 (250)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------------CHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhhcccccCCCCCCcCHHHHHHHHHHHhCcc
Confidence            99999999999999999999999999999998754321111111 2222       457788999999999999999998


Q ss_pred             CCCccCcEEeecCCcccc
Q 024230          248 ASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       248 ~~~~~G~~i~vdgG~~~~  265 (270)
                      +++++|+++.+|||+++.
T Consensus       232 ~~~~tG~~i~vdGG~~~~  249 (250)
T 2fwm_X          232 ASHITLQDIVVDGGSTLG  249 (250)
T ss_dssp             GTTCCSCEEEESTTTTTT
T ss_pred             ccCCCCCEEEECCCcccC
Confidence            899999999999998754

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=5.9e-47  Score=324.87  Aligned_cols=249  Identities=22%  Similarity=0.288  Sum_probs=216.0

Q ss_pred             cCC-CCCCEEEEecCC--CcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Q 024230           15 RWS-LQGMTALVTGGT--KGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTV   91 (270)
Q Consensus        15 ~~~-l~gk~vlItG~s--~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i   91 (270)
                      +|+ |+||++|||||+  +|||+++|++|+++|++|++++|+++ .++..+++......+.++.+|++|+++++++++++
T Consensus        15 ~m~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~   93 (285)
T 2p91_A           15 FMGLLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFL   93 (285)
T ss_dssp             --CTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHH
T ss_pred             hhhccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHH
Confidence            444 899999999999  99999999999999999999999885 44444555443234778999999999999999999


Q ss_pred             HHHcCCcccEEEECCCCCCC----CCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCC
Q 024230           92 SSLFNGKLNIFVNNVGTSVL----KPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG  167 (270)
Q Consensus        92 ~~~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~  167 (270)
                      .+.+ +++|+||||||....    .++.+.+.++|++.+++|+.+++.++++++|+|.++ .|+||++||..+..+.++.
T Consensus        94 ~~~~-g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~  171 (285)
T 2p91_A           94 EENW-GSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR-NGAIVTLSYYGAEKVVPHY  171 (285)
T ss_dssp             HHHT-SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS-CCEEEEEECGGGTSBCTTT
T ss_pred             HHHc-CCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCEEEEEccchhccCCCCc
Confidence            9998 899999999998754    677789999999999999999999999999999754 5899999999999998999


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCC
Q 024230          168 TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA  247 (270)
Q Consensus       168 ~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (270)
                      ..|++||+++++|+++++.|++++||+|++|+||+++|++...........+.+....|.++..+|+|++++++||+++.
T Consensus       172 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~s~~  251 (285)
T 2p91_A          172 NVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPFGKPITIEDVGDTAVFLCSDW  251 (285)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGG
T ss_pred             cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCc
Confidence            99999999999999999999999999999999999999987654322333444555678889999999999999999988


Q ss_pred             CCCccCcEEeecCCccccc
Q 024230          248 ASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       248 ~~~~~G~~i~vdgG~~~~~  266 (270)
                      +++++|+++.+|||+.+..
T Consensus       252 ~~~~tG~~~~vdgg~~~~~  270 (285)
T 2p91_A          252 ARAITGEVVHVDNGYHIMG  270 (285)
T ss_dssp             GTTCCSCEEEESTTGGGBS
T ss_pred             ccCCCCCEEEECCCccccc
Confidence            8999999999999998754

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=5.7e-47  Score=319.52  Aligned_cols=240  Identities=17%  Similarity=0.182  Sum_probs=201.3

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+++.+++..++++..+.++.++.+|++|+++++++++++.+.
T Consensus         2 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (252)
T 3h7a_A            2 SLTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH   81 (252)
T ss_dssp             ---CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh
Confidence            36789999999999999999999999999999999999999999999999888889999999999999999999999887


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                        +++|++|||||.....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.++...|++||
T Consensus        82 --g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  159 (252)
T 3h7a_A           82 --APLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAK  159 (252)
T ss_dssp             --SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTCHHHHHHH
T ss_pred             --CCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCCccHHHHH
Confidence              799999999999888889999999999999999999999999999999988889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceE-EEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccC
Q 024230          175 GAMNQLAKNLACEWAKDNIRT-NSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG  253 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v-~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  253 (270)
                      +|+++|+++++.|++++||+| ++|+||+++|+|......  ...+......|.+ ..+|+|+|++++||+++....++|
T Consensus       160 aa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~~-~~~pedvA~~~~~l~s~~~~~~~~  236 (252)
T 3h7a_A          160 FGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERRE--QMFGKDALANPDL-LMPPAAVAGAYWQLYQQPKSAWTF  236 (252)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEEC------------------------------CCHHHHHHHHHHHHHCCGGGBCS
T ss_pred             HHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccch--hhhhhhhhcCCcc-CCCHHHHHHHHHHHHhCchhccee
Confidence            999999999999999999999 999999999999876532  2223344455666 889999999999999988889999


Q ss_pred             cEEeec
Q 024230          254 QTVCID  259 (270)
Q Consensus       254 ~~i~vd  259 (270)
                      ++....
T Consensus       237 ~i~~~~  242 (252)
T 3h7a_A          237 EMEIRP  242 (252)
T ss_dssp             EEEEBC
T ss_pred             eEEeee
Confidence            986544

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=2.9e-47  Score=323.09  Aligned_cols=246  Identities=30%  Similarity=0.425  Sum_probs=219.3

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .++|++|++|||||++|||+++|++|+++|++|++++|+++.+++..+++.   .++.++.+|++|+++++++++++.+.
T Consensus         7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~d~~~v~~~~~~~~~~   83 (263)
T 3ak4_A            7 IFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE---NGGFAVEVDVTKRASVDAAMQKAIDA   83 (263)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCT---TCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh---cCCeEEEEeCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999999888776655443   26778999999999999999999999


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCccccccCCCChhhhhh
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                      + +++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|+|.+++ .++||++||..+..+.+....|++|
T Consensus        84 ~-g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  162 (263)
T 3ak4_A           84 L-GGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSAS  162 (263)
T ss_dssp             H-TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             c-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCCchhHHHH
Confidence            8 7999999999998777888999999999999999999999999999998876 6999999999999998999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC----C-----hhhHHHHhhcCCCCCCCChHhHHHHHHHHh
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG----N-----GKFVDEVKSRTPMGRLGEPKEVSSLVAFLC  244 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~----~-----~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  244 (270)
                      |++++.|+++++.|++++||+|+.|+||+++|++......    .     +.....+....|.+++.+|+|+|++++||+
T Consensus       163 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~  242 (263)
T 3ak4_A          163 KFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLA  242 (263)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            9999999999999999999999999999999997643210    0     222334455678889999999999999999


Q ss_pred             CCCCCCccCcEEeecCCccc
Q 024230          245 MPAASYITGQTVCIDGGFTV  264 (270)
Q Consensus       245 s~~~~~~~G~~i~vdgG~~~  264 (270)
                      ++.+++++|+++.+|||+.+
T Consensus       243 s~~~~~~tG~~~~vdgG~~~  262 (263)
T 3ak4_A          243 SDAARFMTGQGINVTGGVRM  262 (263)
T ss_dssp             SGGGTTCCSCEEEESSSSSC
T ss_pred             CccccCCCCCEEEECcCEeC
Confidence            98889999999999999864

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=6.7e-47  Score=321.04  Aligned_cols=245  Identities=18%  Similarity=0.272  Sum_probs=207.3

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      +++|++|||||++|||+++|++|+++|++|++++|+++.++++.+++...+.++.++.+|++|+++++++++++.+.+ +
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g   80 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTW-G   80 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence            578999999999999999999999999999999999999999999998888899999999999999999999999998 8


Q ss_pred             cccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHH
Q 024230           98 KLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAM  177 (270)
Q Consensus        98 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal  177 (270)
                      ++|+||||||.....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.++...|++||+|+
T Consensus        81 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal  160 (264)
T 3tfo_A           81 RIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAV  160 (264)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCChhHHHHHHHH
Confidence            99999999999888899999999999999999999999999999999988889999999999999999999999999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEEe
Q 024230          178 NQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVC  257 (270)
Q Consensus       178 ~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~  257 (270)
                      ++|+++++.|+ + ||+|++|+||+++|+|.......... ...  ........+|+|+|++++||+++...+.+|+++.
T Consensus       161 ~~l~~~la~e~-~-gIrvn~v~PG~v~T~~~~~~~~~~~~-~~~--~~~~~~~~~pedvA~~v~~l~s~~~~~~~~~i~i  235 (264)
T 3tfo_A          161 RAISDGLRQES-T-NIRVTCVNPGVVESELAGTITHEETM-AAM--DTYRAIALQPADIARAVRQVIEAPQSVDTTEITI  235 (264)
T ss_dssp             HHHHHHHHHHC-S-SEEEEEEEECCC--------------------------CCCHHHHHHHHHHHHHSCTTEEEEEEEE
T ss_pred             HHHHHHHHHhC-C-CCEEEEEecCCCcCcccccccchhHH-HHH--HhhhccCCCHHHHHHHHHHHhcCCccCccceEEE
Confidence            99999999998 5 99999999999999988665322111 100  0111235789999999999999999999999999


Q ss_pred             ecCCccccccc
Q 024230          258 IDGGFTVNGFF  268 (270)
Q Consensus       258 vdgG~~~~~~~  268 (270)
                      .++|+...+.+
T Consensus       236 ~p~~~~~~~~~  246 (264)
T 3tfo_A          236 RPTASGNAENL  246 (264)
T ss_dssp             EECC-------
T ss_pred             ecCccccccCc
Confidence            99999887654

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=5.8e-47  Score=323.64  Aligned_cols=249  Identities=26%  Similarity=0.411  Sum_probs=209.1

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHH---HhcCCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHL---QMKGLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      .++++|++|||||++|||+++|++|+++|++|++++|+++.+++..+++   ...+.++.++.+|++|+++++++++++.
T Consensus         2 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (278)
T 1spx_A            2 TRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTL   81 (278)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999999888887777   3334578899999999999999999999


Q ss_pred             HHcCCcccEEEECCCCCCCCCCCCC----CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccc-cccCCCC
Q 024230           93 SLFNGKLNIFVNNVGTSVLKPTLEY----NAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALG-IVSANVG  167 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~-~~~~~~~  167 (270)
                      +.+ +++|+||||||.....++.+.    +.++|++.+++|+.+++.++++++|+|++++ |+||++||..+ ..+.++.
T Consensus        82 ~~~-g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~  159 (278)
T 1spx_A           82 GKF-GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDF  159 (278)
T ss_dssp             HHH-SCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTS
T ss_pred             HHc-CCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCCCCc
Confidence            998 899999999998777777777    9999999999999999999999999998776 89999999998 8888899


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC-Chhh------HHHHhhcCCCCCCCChHhHHHHH
Q 024230          168 TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG-NGKF------VDEVKSRTPMGRLGEPKEVSSLV  240 (270)
Q Consensus       168 ~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~-~~~~------~~~~~~~~~~~~~~~~~dva~~~  240 (270)
                      ..|++||+++++|+++++.|++++||+|++|+||+++|++...... ....      ...+....|.+++.+|+|+++++
T Consensus       160 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v  239 (278)
T 1spx_A          160 PYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVI  239 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCCcCCCCHHHHHHHH
Confidence            9999999999999999999999999999999999999998654311 1111      33444556788999999999999


Q ss_pred             HHHhCCCCCC-ccCcEEeecCCccccc
Q 024230          241 AFLCMPAASY-ITGQTVCIDGGFTVNG  266 (270)
Q Consensus       241 ~~l~s~~~~~-~~G~~i~vdgG~~~~~  266 (270)
                      +||+++..++ ++|+++.+|||+.+..
T Consensus       240 ~~l~s~~~~~~~tG~~~~vdgG~~~~~  266 (278)
T 1spx_A          240 AFLADRKTSSYIIGHQLVVDGGSSLIM  266 (278)
T ss_dssp             HHHHCHHHHTTCCSCEEEESTTGGGC-
T ss_pred             HHHcCccccCcccCcEEEECCCccccc
Confidence            9999987776 9999999999987654

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=1.7e-46  Score=320.35  Aligned_cols=243  Identities=23%  Similarity=0.330  Sum_probs=212.7

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeC-ChhHHHHHHHHHHhc-CCeEEEEEccCCCH----HHHHHHHHH
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSR-TETELNECIHHLQMK-GLKVTGSVCDVSSR----PQRQTLINT   90 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r-~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~----~~~~~~~~~   90 (270)
                      +|+||++|||||++|||+++|++|+++|++|++++| +++.++++.+++... +.++.++.+|++++    +++++++++
T Consensus         8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   87 (276)
T 1mxh_A            8 ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDC   87 (276)
T ss_dssp             ---CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHH
Confidence            478999999999999999999999999999999999 888888888888765 67899999999999    999999999


Q ss_pred             HHHHcCCcccEEEECCCCCCCCCCCCCCH-----------HHHHHHHHHhhHHHHHHHHHHHHHHHhcCC------cEEE
Q 024230           91 VSSLFNGKLNIFVNNVGTSVLKPTLEYNA-----------EDFSLVMSTNFESAFHLCQLAHPLLRASGA------ASIV  153 (270)
Q Consensus        91 i~~~~~~~id~li~~ag~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~------g~ii  153 (270)
                      +.+.+ +++|+||||||.....++.+.+.           ++|++.+++|+.+++.++++++|+|. ++.      ++||
T Consensus        88 ~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~~~~~g~iv  165 (276)
T 1mxh_A           88 SFRAF-GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EGGAWRSRNLSVV  165 (276)
T ss_dssp             HHHHH-SCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC--------CCCEEEE
T ss_pred             HHHhc-CCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cCCCCCCCCcEEE
Confidence            99988 79999999999987778888888           99999999999999999999999997 555      8999


Q ss_pred             EecCccccccCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCC-CCC
Q 024230          154 LMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGR-LGE  232 (270)
Q Consensus       154 ~iss~~~~~~~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~  232 (270)
                      ++||..++.+.++...|++||+++++|+++++.|++++||+|++|+||+++|+ . ..  .+.....+....|.++ ..+
T Consensus       166 ~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~-~~--~~~~~~~~~~~~p~~r~~~~  241 (276)
T 1mxh_A          166 NLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-P-AM--PQETQEEYRRKVPLGQSEAS  241 (276)
T ss_dssp             EECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-S-SS--CHHHHHHHHTTCTTTSCCBC
T ss_pred             EECchhhcCCCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-c-cC--CHHHHHHHHhcCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999 2 22  2334444555678888 899


Q ss_pred             hHhHHHHHHHHhCCCCCCccCcEEeecCCcccc
Q 024230          233 PKEVSSLVAFLCMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       233 ~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                      |+|++++++||+++.+++++|+++.+|||+++.
T Consensus       242 ~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~  274 (276)
T 1mxh_A          242 AAQIADAIAFLVSKDAGYITGTTLKVDGGLILA  274 (276)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHHHHHhCccccCccCcEEEECCchhcc
Confidence            999999999999998899999999999998754

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=5.4e-47  Score=318.76  Aligned_cols=240  Identities=31%  Similarity=0.475  Sum_probs=201.8

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      ..++++|+||||||++|||+++|++|+++|++|++++|+++.+++..+++.   .++.++.+|+++.++++++++++   
T Consensus         9 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~---   82 (249)
T 3f9i_A            9 MIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK---DNYTIEVCNLANKEECSNLISKT---   82 (249)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---SSEEEEECCTTSHHHHHHHHHTC---
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc---cCccEEEcCCCCHHHHHHHHHhc---
Confidence            568899999999999999999999999999999999999998888776663   47888999999999988887653   


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                        +++|++|||||.....++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..++.+.++...|++||
T Consensus        83 --~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  160 (249)
T 3f9i_A           83 --SNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASK  160 (249)
T ss_dssp             --SCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCSHHHHHHH
T ss_pred             --CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCCchhHHHH
Confidence              689999999999888888888999999999999999999999999999988889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCc
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ  254 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  254 (270)
                      +|+++|+++++.|++++||+|++|+||+++|++...+  .+...+.+....+.+++.+|+|++++++||+++.+++++|+
T Consensus       161 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~  238 (249)
T 3f9i_A          161 AGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKL--NEKQREAIVQKIPLGTYGIPEDVAYAVAFLASNNASYITGQ  238 (249)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBC------C--CHHHHHHHHHHCTTCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHHHHcCcEEEEEecCccccCccccc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCccCCccCc
Confidence            9999999999999999999999999999999988765  34455566677889999999999999999999999999999


Q ss_pred             EEeecCCccc
Q 024230          255 TVCIDGGFTV  264 (270)
Q Consensus       255 ~i~vdgG~~~  264 (270)
                      ++.+|||+.+
T Consensus       239 ~~~vdgG~~~  248 (249)
T 3f9i_A          239 TLHVNGGMLM  248 (249)
T ss_dssp             EEEESTTSSC
T ss_pred             EEEECCCEee
Confidence            9999999875

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=5.3e-47  Score=321.22  Aligned_cols=249  Identities=27%  Similarity=0.324  Sum_probs=217.2

Q ss_pred             CCCCCCEEEEecCC--CcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGT--KGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        16 ~~l~gk~vlItG~s--~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      ++|++|++|||||+  +|||+++|++|+++|++|++++|+++ .++..+++......+.++.+|++|+++++++++++.+
T Consensus         4 ~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (261)
T 2wyu_A            4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKE   82 (261)
T ss_dssp             ECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHH
Confidence            46889999999999  99999999999999999999999975 3334444444323478899999999999999999999


Q ss_pred             HcCCcccEEEECCCCCCC----CCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChh
Q 024230           94 LFNGKLNIFVNNVGTSVL----KPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTV  169 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~  169 (270)
                      .+ +++|++|||||....    .++.+.+.++|++.+++|+.+++.+++++.|+|++  .|+||++||..+..+.+....
T Consensus        83 ~~-g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~  159 (261)
T 2wyu_A           83 AF-GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEKVVPKYNV  159 (261)
T ss_dssp             HH-SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGTSBCTTCHH
T ss_pred             Hc-CCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc--CCEEEEEecccccCCCCCchH
Confidence            98 899999999998763    67788999999999999999999999999999864  489999999999999899999


Q ss_pred             hhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCC
Q 024230          170 YSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAAS  249 (270)
Q Consensus       170 y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  249 (270)
                      |++||+++++|+++++.|++++||+|++|+||+++|++.......+...+.+....|.+++.+|+|++++++||+++.++
T Consensus       160 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s~~~~  239 (261)
T 2wyu_A          160 MAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPLAS  239 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhc
Confidence            99999999999999999999999999999999999998765432233444555667889999999999999999999899


Q ss_pred             CccCcEEeecCCccccccc
Q 024230          250 YITGQTVCIDGGFTVNGFF  268 (270)
Q Consensus       250 ~~~G~~i~vdgG~~~~~~~  268 (270)
                      +++|+++.+|||+.+...+
T Consensus       240 ~~tG~~~~vdgG~~~~~~~  258 (261)
T 2wyu_A          240 GITGEVVYVDAGYHIMGME  258 (261)
T ss_dssp             TCCSCEEEESTTGGGBC--
T ss_pred             CCCCCEEEECCCccccCCC
Confidence            9999999999999876543

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=4.2e-46  Score=315.58  Aligned_cols=239  Identities=29%  Similarity=0.424  Sum_probs=216.7

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      .+|+||+++||||++|||+++|++|+++|++|++++|+++.+++..+++..   ++.++.+|++|+++++++++++.+.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~~   79 (260)
T 1nff_A            3 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD---AARYVHLDVTQPAQWKAAVDTAVTAF   79 (260)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGG---GEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc---CceEEEecCCCHHHHHHHHHHHHHHc
Confidence            458899999999999999999999999999999999999888776666542   48889999999999999999999998


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKG  175 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKa  175 (270)
                       +++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||..++.+.++...|++||+
T Consensus        80 -g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  158 (260)
T 1nff_A           80 -GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKF  158 (260)
T ss_dssp             -SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCCchhHHHHHH
Confidence             7999999999998888888999999999999999999999999999999887899999999999999899999999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcE
Q 024230          176 AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT  255 (270)
Q Consensus       176 al~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  255 (270)
                      ++++|+++++.|++++||+|++|+||+++|++.. +. ...    +. ..|.++..+|+|++++++||+++.+.+++|++
T Consensus       159 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-~~-~~~----~~-~~~~~~~~~~~dvA~~v~~l~s~~~~~~~G~~  231 (260)
T 1nff_A          159 AVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD-WV-PED----IF-QTALGRAAEPVEVSNLVVYLASDESSYSTGAE  231 (260)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT-TS-CTT----CS-CCSSSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc-cc-hhh----HH-hCccCCCCCHHHHHHHHHHHhCccccCCcCCE
Confidence            9999999999999999999999999999999864 21 111    11 45778889999999999999999889999999


Q ss_pred             EeecCCcccc
Q 024230          256 VCIDGGFTVN  265 (270)
Q Consensus       256 i~vdgG~~~~  265 (270)
                      +.+|||+.+.
T Consensus       232 ~~v~gG~~~~  241 (260)
T 1nff_A          232 FVVDGGTVAG  241 (260)
T ss_dssp             EEESTTGGGS
T ss_pred             EEECCCeecc
Confidence            9999998764

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=6.1e-47  Score=320.75  Aligned_cols=236  Identities=26%  Similarity=0.424  Sum_probs=212.8

Q ss_pred             cccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           13 QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        13 ~~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      ..++++++|++|||||++|||+++|++|+++|++|++++|+.+..+         ..++.++.+|++|+++++++++++.
T Consensus        21 ~~m~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---------~~~~~~~~~Dv~d~~~v~~~~~~~~   91 (260)
T 3un1_A           21 QSMMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA---------DPDIHTVAGDISKPETADRIVREGI   91 (260)
T ss_dssp             HHHHHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS---------STTEEEEESCTTSHHHHHHHHHHHH
T ss_pred             hhhhCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc---------cCceEEEEccCCCHHHHHHHHHHHH
Confidence            3457899999999999999999999999999999999999876432         2368899999999999999999999


Q ss_pred             HHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC--CCChhh
Q 024230           93 SLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA--NVGTVY  170 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~--~~~~~y  170 (270)
                      +.+ +++|++|||||.....++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+..+.  +....|
T Consensus        92 ~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y  170 (260)
T 3un1_A           92 ERF-GRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALA  170 (260)
T ss_dssp             HHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTCCCHHH
T ss_pred             HHC-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCCccHHH
Confidence            998 89999999999988888999999999999999999999999999999999888999999998886443  455789


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCC
Q 024230          171 SATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY  250 (270)
Q Consensus       171 ~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  250 (270)
                      ++||+|+++|+++++.|++++||+|++|+||+++|++...     .....+....|.+++.+|+|++++++||  +.+++
T Consensus       171 ~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~-----~~~~~~~~~~p~~r~~~~~dva~av~~L--~~~~~  243 (260)
T 3un1_A          171 SLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPA-----ETHSTLAGLHPVGRMGEIRDVVDAVLYL--EHAGF  243 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCG-----GGHHHHHTTSTTSSCBCHHHHHHHHHHH--HHCTT
T ss_pred             HHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCH-----HHHHHHhccCCCCCCcCHHHHHHHHHHh--cccCC
Confidence            9999999999999999999999999999999999998743     3445566778999999999999999999  46789


Q ss_pred             ccCcEEeecCCcccc
Q 024230          251 ITGQTVCIDGGFTVN  265 (270)
Q Consensus       251 ~~G~~i~vdgG~~~~  265 (270)
                      +||+++.+|||+.+.
T Consensus       244 itG~~i~vdGG~~~~  258 (260)
T 3un1_A          244 ITGEILHVDGGQNAG  258 (260)
T ss_dssp             CCSCEEEESTTGGGC
T ss_pred             CCCcEEEECCCeecc
Confidence            999999999999875

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=8.2e-46  Score=313.15  Aligned_cols=250  Identities=32%  Similarity=0.501  Sum_probs=225.8

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .+++++|+++||||++|||++++++|+++|++|++++|+++..++..++++..+.++.++.+|++|+++++++++++.+.
T Consensus         8 ~~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (260)
T 3awd_A            8 KLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQ   87 (260)
T ss_dssp             GGCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            36789999999999999999999999999999999999999888888888777778999999999999999999999998


Q ss_pred             cCCcccEEEECCCCCC-CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCC--hhhh
Q 024230           95 FNGKLNIFVNNVGTSV-LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG--TVYS  171 (270)
Q Consensus        95 ~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~--~~y~  171 (270)
                      + +++|++|||||... ..++.+.+.++|++.+++|+.+++.+++++.|+|.+++.++||++||..+..+.+..  ..|+
T Consensus        88 ~-~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~Y~  166 (260)
T 3awd_A           88 E-GRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYN  166 (260)
T ss_dssp             H-SCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCCHHHH
T ss_pred             c-CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCCCccccH
Confidence            8 79999999999876 677888999999999999999999999999999988778999999999998887777  8999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCc
Q 024230          172 ATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI  251 (270)
Q Consensus       172 ~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  251 (270)
                      +||++++.|+++++.|++++||+++.|+||+++|++.......+.....+....|.++..+|+|+++++++++++...++
T Consensus       167 ~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  246 (260)
T 3awd_A          167 ASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQFLASDAASLM  246 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCchhccC
Confidence            99999999999999999999999999999999999876211233444555566788889999999999999999888899


Q ss_pred             cCcEEeecCCcccc
Q 024230          252 TGQTVCIDGGFTVN  265 (270)
Q Consensus       252 ~G~~i~vdgG~~~~  265 (270)
                      +|+++.+|||+..+
T Consensus       247 ~G~~~~v~gg~~~~  260 (260)
T 3awd_A          247 TGAIVNVDAGFTVW  260 (260)
T ss_dssp             CSCEEEESTTTTTC
T ss_pred             CCcEEEECCceecC
Confidence            99999999998754

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=5.9e-47  Score=321.58  Aligned_cols=246  Identities=19%  Similarity=0.277  Sum_probs=214.5

Q ss_pred             CCCCCEEEEecCC--CcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           17 SLQGMTALVTGGT--KGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        17 ~l~gk~vlItG~s--~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      +|+||++|||||+  +|||+++|++|+++|++|++++|++ ..++..+++........++.+|++|+++++++++++.+.
T Consensus         6 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (265)
T 1qsg_A            6 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKV   84 (265)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHH
Confidence            3899999999999  9999999999999999999999987 344444445443233478899999999999999999998


Q ss_pred             cCCcccEEEECCCCCCC----CCCCC-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChh
Q 024230           95 FNGKLNIFVNNVGTSVL----KPTLE-YNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTV  169 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~----~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~  169 (270)
                      + +++|+||||||....    .++.+ .+.++|++.+++|+.+++.++++++|+|.+  .|+||++||..+..+.+....
T Consensus        85 ~-g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~  161 (265)
T 1qsg_A           85 W-PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNV  161 (265)
T ss_dssp             C-SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTTTH
T ss_pred             c-CCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEcchhhccCCCCchH
Confidence            8 799999999998653    56667 899999999999999999999999999964  479999999999999899999


Q ss_pred             hhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCC
Q 024230          170 YSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAAS  249 (270)
Q Consensus       170 y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  249 (270)
                      |++||+++++|+++++.|++++||+|++|+||+++|++.......+...+.+....|.+++.+|+|++++++||+++.++
T Consensus       162 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s~~~~  241 (265)
T 1qsg_A          162 MGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSA  241 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhc
Confidence            99999999999999999999999999999999999998765432233344455567888999999999999999998889


Q ss_pred             CccCcEEeecCCccccc
Q 024230          250 YITGQTVCIDGGFTVNG  266 (270)
Q Consensus       250 ~~~G~~i~vdgG~~~~~  266 (270)
                      +++|+++.+|||+.+.+
T Consensus       242 ~~tG~~~~vdgG~~~~~  258 (265)
T 1qsg_A          242 GISGEVVHVDGGFSIAA  258 (265)
T ss_dssp             TCCSCEEEESTTGGGBC
T ss_pred             CccCCEEEECCCcCCCC
Confidence            99999999999998764

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=1.2e-46  Score=321.41  Aligned_cols=245  Identities=22%  Similarity=0.240  Sum_probs=216.4

Q ss_pred             CCCCCEEEEecCC--CcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           17 SLQGMTALVTGGT--KGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        17 ~l~gk~vlItG~s--~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      +++||++|||||+  +|||+++|++|+++|++|++++|+++ .++..+++......+.++.+|++|+++++++++++.+.
T Consensus         3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (275)
T 2pd4_A            3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKD   81 (275)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHH
Confidence            5789999999999  99999999999999999999999986 44444555443234788999999999999999999999


Q ss_pred             cCCcccEEEECCCCCCC----CCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhh
Q 024230           95 FNGKLNIFVNNVGTSVL----KPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVY  170 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y  170 (270)
                      + +++|+||||||....    .++.+.+.++|++++++|+.+++.++++++|+|++  .|+||++||..+..+.++...|
T Consensus        82 ~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y  158 (275)
T 2pd4_A           82 L-GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN--GASVLTLSYLGSTKYMAHYNVM  158 (275)
T ss_dssp             T-SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTCHHH
T ss_pred             c-CCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEecchhcCCCCCchhh
Confidence            8 899999999998764    67788999999999999999999999999999964  4899999999999998999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCC
Q 024230          171 SATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY  250 (270)
Q Consensus       171 ~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  250 (270)
                      ++||+++++|+++++.|++++||+|++|+||+++|++.......+.....+....|.++..+|+|+++.++||+++.+++
T Consensus       159 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s~~~~~  238 (275)
T 2pd4_A          159 GLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSG  238 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCccccC
Confidence            99999999999999999999999999999999999987654322334444555678889999999999999999998899


Q ss_pred             ccCcEEeecCCcccc
Q 024230          251 ITGQTVCIDGGFTVN  265 (270)
Q Consensus       251 ~~G~~i~vdgG~~~~  265 (270)
                      ++|+++.+|||+.+.
T Consensus       239 ~tG~~~~vdgg~~~~  253 (275)
T 2pd4_A          239 VSGEVHFVDAGYHVM  253 (275)
T ss_dssp             CCSCEEEESTTGGGB
T ss_pred             CCCCEEEECCCcccC
Confidence            999999999998764

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=5e-46  Score=314.74  Aligned_cols=249  Identities=29%  Similarity=0.441  Sum_probs=225.5

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeC-ChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSR-TETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .++++|++|||||++|||++++++|+++|++|++++| +++..+++.+++...+.++.++.+|++++++++++++++.+.
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (261)
T 1gee_A            3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE   82 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999 888888888888777778999999999999999999999998


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCccccccCCCChhhhhh
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                      + +++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|+|.+++ .++||++||..+..+.+....|++|
T Consensus        83 ~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  161 (261)
T 1gee_A           83 F-GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAAS  161 (261)
T ss_dssp             H-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             c-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCCccHHHHH
Confidence            8 7999999999998777888899999999999999999999999999998876 7899999999999998999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccC
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG  253 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  253 (270)
                      |++++.++++++.|+++.||+++.|+||+++|++.......+.....+....|.++..+|+|++++++||+++.+.+++|
T Consensus       162 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  241 (261)
T 1gee_A          162 KGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTG  241 (261)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCC
Confidence            99999999999999999999999999999999987554323333444555667788999999999999999988889999


Q ss_pred             cEEeecCCcccc
Q 024230          254 QTVCIDGGFTVN  265 (270)
Q Consensus       254 ~~i~vdgG~~~~  265 (270)
                      +++.+|||+++.
T Consensus       242 ~~~~v~gg~~~~  253 (261)
T 1gee_A          242 ITLFADGGMTLY  253 (261)
T ss_dssp             CEEEESTTGGGC
T ss_pred             cEEEEcCCcccC
Confidence            999999999864

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=7.4e-47  Score=329.70  Aligned_cols=245  Identities=24%  Similarity=0.296  Sum_probs=218.6

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCC----------hhHHHHHHHHHHhcCCeEEEEEccCCCHHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRT----------ETELNECIHHLQMKGLKVTGSVCDVSSRPQ   83 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~----------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   83 (270)
                      .+.+++||++|||||++|||+++|++|+++|++|++++|+          .+..++..+++...+.++.++.+|++|+++
T Consensus        21 ~m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~  100 (322)
T 3qlj_A           21 SMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQ  100 (322)
T ss_dssp             -CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHH
T ss_pred             hhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHH
Confidence            3557999999999999999999999999999999999998          677888888888888899999999999999


Q ss_pred             HHHHHHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC------CcEEEEecC
Q 024230           84 RQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG------AASIVLMSS  157 (270)
Q Consensus        84 ~~~~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~------~g~ii~iss  157 (270)
                      ++++++++.+.+ +++|+||||||.....++.+.+.++|++++++|+.+++.+++++.|+|.+.+      .|+||++||
T Consensus       101 v~~~~~~~~~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS  179 (322)
T 3qlj_A          101 AAGLIQTAVETF-GGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSS  179 (322)
T ss_dssp             HHHHHHHHHHHH-SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECC
T ss_pred             HHHHHHHHHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcC
Confidence            999999999999 8999999999998888899999999999999999999999999999997542      379999999


Q ss_pred             ccccccCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHH
Q 024230          158 ALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVS  237 (270)
Q Consensus       158 ~~~~~~~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  237 (270)
                      ..+..+.++...|++||+|+++|+++++.|++++||+||+|+|| +.|+|.........  .   ......+..+|+|++
T Consensus       180 ~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~--~---~~~~~~~~~~pedva  253 (322)
T 3qlj_A          180 GAGLQGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMM--A---TQDQDFDAMAPENVS  253 (322)
T ss_dssp             HHHHHCBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC-------------CCTTCGGGTH
T ss_pred             HHHccCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhh--h---ccccccCCCCHHHHH
Confidence            99999999999999999999999999999999999999999999 99998876543211  1   111122456899999


Q ss_pred             HHHHHHhCCCCCCccCcEEeecCCcccc
Q 024230          238 SLVAFLCMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       238 ~~~~~l~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                      ++++||+++.++++||++|.+|||+...
T Consensus       254 ~~v~~L~s~~~~~itG~~i~vdGG~~~~  281 (322)
T 3qlj_A          254 PLVVWLGSAEARDVTGKVFEVEGGKIRV  281 (322)
T ss_dssp             HHHHHHTSGGGGGCCSCEEEEETTEEEE
T ss_pred             HHHHHHhCccccCCCCCEEEECCCcccc
Confidence            9999999999999999999999999774

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=2.3e-46  Score=317.80  Aligned_cols=252  Identities=65%  Similarity=1.079  Sum_probs=200.0

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .+++++|++|||||++|||++++++|+++|++|++++|+++.+++..++++..+.++.++.+|++++++++++++++.+.
T Consensus         9 ~~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   88 (266)
T 1xq1_A            9 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSM   88 (266)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999999888888888777778999999999999999999999888


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                      +++++|++|||||.....++.+.+.++|++.+++|+.+++++++++.|+|++++.++||++||..+..+.+....|++||
T Consensus        89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  168 (266)
T 1xq1_A           89 FGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATK  168 (266)
T ss_dssp             HTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHHH
T ss_pred             hCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCCCchHHHHH
Confidence            75689999999999877788889999999999999999999999999999888789999999999998888889999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCc
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ  254 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  254 (270)
                      ++++.|+++++.|++++||+++.|+||++.|++..... .+..........|.++..+|+|+++++.||+++.+.+++|+
T Consensus       169 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  247 (266)
T 1xq1_A          169 GALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVY-DDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYITGQ  247 (266)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEECCSCC--------------------------CCGGGGHHHHHHHTSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCc
Confidence            99999999999999999999999999999999876543 22223333445677788999999999999999888999999


Q ss_pred             EEeecCCcccccc
Q 024230          255 TVCIDGGFTVNGF  267 (270)
Q Consensus       255 ~i~vdgG~~~~~~  267 (270)
                      ++.+|||+.+.++
T Consensus       248 ~~~v~gG~~~~~~  260 (266)
T 1xq1_A          248 TICVDGGLTVNGF  260 (266)
T ss_dssp             EEECCCCEEETTE
T ss_pred             EEEEcCCcccccc
Confidence            9999999987764

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-46  Score=320.80  Aligned_cols=245  Identities=29%  Similarity=0.458  Sum_probs=215.3

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      ..+++||++|||||++|||+++|++|+++|++|++++|+++.+++..+++.    ++.++.+|++|+++++++++++.+.
T Consensus         4 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~~~~~~   79 (270)
T 1yde_A            4 GTRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP----GAVFILCDVTQEDDVKTLVSETIRR   79 (270)
T ss_dssp             CCTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT----TEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----CCeEEEcCCCCHHHHHHHHHHHHHH
Confidence            346899999999999999999999999999999999999888776655442    3788999999999999999999999


Q ss_pred             cCCcccEEEECCCCCC-CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhh
Q 024230           95 FNGKLNIFVNNVGTSV-LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        95 ~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                      + +++|++|||||... ..++.+.+.++|++.+++|+.+++.++++++|+|+++ .|+||++||..+..+.+....|++|
T Consensus        80 ~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~as  157 (270)
T 1yde_A           80 F-GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQAVPYVAT  157 (270)
T ss_dssp             H-SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCCTTCHHHHHH
T ss_pred             c-CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCccccCCCCCCcccHHH
Confidence            8 89999999999865 4678889999999999999999999999999999765 5899999999999888999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC-hh---hHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCC
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN-GK---FVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAAS  249 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  249 (270)
                      |+++++|+++++.|++++||+|++|+||+++|++....... ..   .........|.+++.+|+|+++.++||+++ ++
T Consensus       158 Kaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~-~~  236 (270)
T 1yde_A          158 KGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-AN  236 (270)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHHH-CT
T ss_pred             HHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCCCCCcCHHHHHHHHHHHccc-CC
Confidence            99999999999999999999999999999999976443211 11   122223457889999999999999999997 79


Q ss_pred             CccCcEEeecCCccccc
Q 024230          250 YITGQTVCIDGGFTVNG  266 (270)
Q Consensus       250 ~~~G~~i~vdgG~~~~~  266 (270)
                      ++||++|.+|||+.+.+
T Consensus       237 ~itG~~i~vdGG~~~~~  253 (270)
T 1yde_A          237 FCTGIELLVTGGAELGY  253 (270)
T ss_dssp             TCCSCEEEESTTTTSCC
T ss_pred             CcCCCEEEECCCeeccc
Confidence            99999999999987653

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=6.2e-47  Score=318.93  Aligned_cols=238  Identities=17%  Similarity=0.212  Sum_probs=207.4

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhc--C-CeEEEEEccCCCHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK--G-LKVTGSVCDVSSRPQRQTLINTV   91 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~--~-~~~~~~~~D~~~~~~~~~~~~~i   91 (270)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+++.+++..+++...  + .++.++.+|++|+++++++++++
T Consensus         2 ~~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   81 (250)
T 3nyw_A            2 SLEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDI   81 (250)
T ss_dssp             ---CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999999999888888764  3 67889999999999999999999


Q ss_pred             HHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhh
Q 024230           92 SSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYS  171 (270)
Q Consensus        92 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~  171 (270)
                      .+.+ +++|++|||||.....++ +.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.+....|+
T Consensus        82 ~~~~-g~iD~lvnnAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  159 (250)
T 3nyw_A           82 HQKY-GAVDILVNAAAMFMDGSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYG  159 (250)
T ss_dssp             HHHH-CCEEEEEECCCCCCCCCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CCTTHHH
T ss_pred             HHhc-CCCCEEEECCCcCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCCCcchH
Confidence            9998 899999999999877777 88999999999999999999999999999988889999999999998777789999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCC-CCCC
Q 024230          172 ATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP-AASY  250 (270)
Q Consensus       172 ~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~-~~~~  250 (270)
                      +||+|+++|+++++.|++++||+|++|+||+++|+|.....          ...+.+++.+|+|++++++||+++ ...+
T Consensus       160 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~----------~~~~~~~~~~p~dva~~v~~l~s~~~~~~  229 (250)
T 3nyw_A          160 STKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAG----------TPFKDEEMIQPDDLLNTIRCLLNLSENVC  229 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTT----------CCSCGGGSBCHHHHHHHHHHHHTSCTTEE
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcC----------CCcccccCCCHHHHHHHHHHHHcCCCceE
Confidence            99999999999999999999999999999999998764432          223456788999999999999995 5667


Q ss_pred             ccCcEEeecCCccc
Q 024230          251 ITGQTVCIDGGFTV  264 (270)
Q Consensus       251 ~~G~~i~vdgG~~~  264 (270)
                      +++.+|.+|||...
T Consensus       230 ~~~~~i~vd~~~~~  243 (250)
T 3nyw_A          230 IKDIVFEMKKSIIE  243 (250)
T ss_dssp             CCEEEEEEHHHHHC
T ss_pred             eeEEEEEeeccccc
Confidence            88889999998754

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=3.8e-46  Score=311.96  Aligned_cols=235  Identities=33%  Similarity=0.549  Sum_probs=211.0

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      +|+++||||++|||+++|++|+++|++|++++|+++..   .+++   +  +.++.+|+++ ++++++++++.+.+ +++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~---~~~~---~--~~~~~~D~~~-~~~~~~~~~~~~~~-g~i   71 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEA---AQSL---G--AVPLPTDLEK-DDPKGLVKRALEAL-GGL   71 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHH---HHHH---T--CEEEECCTTT-SCHHHHHHHHHHHH-TSC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH---HHhh---C--cEEEecCCch-HHHHHHHHHHHHHc-CCC
Confidence            69999999999999999999999999999999998762   2333   2  6778999999 99999999999888 799


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC--CCChhhhhhHHHH
Q 024230          100 NIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA--NVGTVYSATKGAM  177 (270)
Q Consensus       100 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~--~~~~~y~~sKaal  177 (270)
                      |++|||||.....++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||..++.+.  +....|++||+++
T Consensus        72 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~  151 (239)
T 2ekp_A           72 HVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTAL  151 (239)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTSCCHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCCCCCccHHHHHHHH
Confidence            99999999988888889999999999999999999999999999998888999999999998887  8889999999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEEe
Q 024230          178 NQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVC  257 (270)
Q Consensus       178 ~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~  257 (270)
                      ++|+++++.|++++||+|++|+||+++|++.......+...+.+....|.+++.+|+|+|+.++||+++.+++++|+++.
T Consensus       152 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~  231 (239)
T 2ekp_A          152 LGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVLCGDEAEYLTGQAVA  231 (239)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEE
T ss_pred             HHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCEEE
Confidence            99999999999999999999999999999875542233344455566788899999999999999999988999999999


Q ss_pred             ecCCccc
Q 024230          258 IDGGFTV  264 (270)
Q Consensus       258 vdgG~~~  264 (270)
                      +|||+..
T Consensus       232 vdgG~~~  238 (239)
T 2ekp_A          232 VDGGFLA  238 (239)
T ss_dssp             ESTTTTT
T ss_pred             ECCCccc
Confidence            9999853

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=7e-47  Score=319.12  Aligned_cols=238  Identities=28%  Similarity=0.467  Sum_probs=203.9

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      ..+++++|+++||||++|||+++|++|+++|++|++++|+++.++           ++.++.+|++|+++++++++++.+
T Consensus        15 ~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~Dl~d~~~v~~~~~~~~~   83 (253)
T 2nm0_A           15 VPRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-----------GFLAVKCDITDTEQVEQAYKEIEE   83 (253)
T ss_dssp             -----CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-----------TSEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc-----------cceEEEecCCCHHHHHHHHHHHHH
Confidence            346789999999999999999999999999999999999876532           267889999999999999999999


Q ss_pred             HcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhh
Q 024230           94 LFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                      .+ +++|+||||||.....++.+.+.++|++++++|+.+++.++++++|.|++++.|+||++||..+..+.++...|++|
T Consensus        84 ~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as  162 (253)
T 2nm0_A           84 TH-GPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAAS  162 (253)
T ss_dssp             HT-CSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHHHHHHHHH
T ss_pred             Hc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCcHHHHHH
Confidence            98 89999999999988788888999999999999999999999999999998878999999999998888888899999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccC
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG  253 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  253 (270)
                      |+++++|+++++.|+++.||+|++|+||+++|++...+.  +...+.+....|.++..+|+|+|+.++||+++.+++++|
T Consensus       163 K~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~p~~~~~~p~dvA~~i~~l~s~~~~~~tG  240 (253)
T 2nm0_A          163 KAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLT--DEQRANIVSQVPLGRYARPEEIAATVRFLASDDASYITG  240 (253)
T ss_dssp             HHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC-----------CHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcC--HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcC
Confidence            999999999999999999999999999999999876532  222344455678889999999999999999998999999


Q ss_pred             cEEeecCCcccc
Q 024230          254 QTVCIDGGFTVN  265 (270)
Q Consensus       254 ~~i~vdgG~~~~  265 (270)
                      +++.+|||+.+.
T Consensus       241 ~~i~vdGG~~~~  252 (253)
T 2nm0_A          241 AVIPVDGGLGMG  252 (253)
T ss_dssp             CEEEESTTTTCC
T ss_pred             cEEEECCccccC
Confidence            999999998753

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=1.8e-45  Score=309.33  Aligned_cols=245  Identities=29%  Similarity=0.429  Sum_probs=220.7

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHH-HhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHL-QMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      ++|+++||||++|||++++++|+++|++|++++|+++.+++..+++ +..+.++.++.+|++|+++++++++++.+.+ +
T Consensus         1 ~~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~   79 (250)
T 2cfc_A            1 MSRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQF-G   79 (250)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-C
Confidence            3799999999999999999999999999999999998888877777 4445678999999999999999999999988 7


Q ss_pred             cccEEEECCCCCCCCC---CCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           98 KLNIFVNNVGTSVLKP---TLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        98 ~id~li~~ag~~~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                      ++|++|||||.....+   +.+.+.++|++.+++|+.+++.+++.++|+|++++.++||++||..+..+.++...|++||
T Consensus        80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  159 (250)
T 2cfc_A           80 AIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSK  159 (250)
T ss_dssp             CCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCchhHHHHH
Confidence            9999999999876655   7788999999999999999999999999999988789999999999999989999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCc
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ  254 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  254 (270)
                      ++++.|+++++.|+.++||+++.|+||+++|++.......+.....+....|.+++.+|+|+++.++||+++...+++|+
T Consensus       160 ~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  239 (250)
T 2cfc_A          160 GAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMFLAGEDATYVNGA  239 (250)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSTTCTTCCSC
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhhcccCC
Confidence            99999999999999999999999999999999876522233444455566788889999999999999999988999999


Q ss_pred             EEeecCCccc
Q 024230          255 TVCIDGGFTV  264 (270)
Q Consensus       255 ~i~vdgG~~~  264 (270)
                      ++.+|||++.
T Consensus       240 ~~~v~gG~~~  249 (250)
T 2cfc_A          240 ALVMDGAYTA  249 (250)
T ss_dssp             EEEESTTGGG
T ss_pred             EEEECCceec
Confidence            9999999863

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-45  Score=316.31  Aligned_cols=248  Identities=27%  Similarity=0.436  Sum_probs=223.0

Q ss_pred             cccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           13 QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        13 ~~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      ...+++++|+++||||++|||+++|++|+++|++|++++|+++.++++.++++..+.++.++.+|++|+++++++++++.
T Consensus        37 ~~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~  116 (285)
T 2c07_A           37 NYYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKIL  116 (285)
T ss_dssp             CCCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999999988888888887777789999999999999999999999


Q ss_pred             HHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhh
Q 024230           93 SLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSA  172 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~  172 (270)
                      +.+ +++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||..+..+.++...|++
T Consensus       117 ~~~-~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~a  195 (285)
T 2c07_A          117 TEH-KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSS  195 (285)
T ss_dssp             HHC-SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHH
T ss_pred             Hhc-CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCCchHHH
Confidence            988 7999999999998888888999999999999999999999999999998887899999999999999899999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCcc
Q 024230          173 TKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT  252 (270)
Q Consensus       173 sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  252 (270)
                      ||++++.|+++++.|+++.||+|+.|+||+++|++....  .+...+.+....+.+++.+|+|+|++++|++++.+++++
T Consensus       196 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~  273 (285)
T 2c07_A          196 SKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI--SEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGYIN  273 (285)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C--CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhc--CHHHHHHHHhhCCCCCCCCHHHHHHHHHHHhCCCcCCCC
Confidence            999999999999999999999999999999999987653  233334455567788899999999999999998889999


Q ss_pred             CcEEeecCCcc
Q 024230          253 GQTVCIDGGFT  263 (270)
Q Consensus       253 G~~i~vdgG~~  263 (270)
                      |+++.+|||+.
T Consensus       274 G~~i~v~gG~~  284 (285)
T 2c07_A          274 GRVFVIDGGLS  284 (285)
T ss_dssp             SCEEEESTTSC
T ss_pred             CCEEEeCCCcc
Confidence            99999999985

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=1.6e-46  Score=319.70  Aligned_cols=243  Identities=21%  Similarity=0.229  Sum_probs=210.4

Q ss_pred             CCCCCCEEEEecC--CCcHHHHHHHHHHHCCCeEEEeeCChhHH-HHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGG--TKGLGLAVVEELSMLGATVHTCSRTETEL-NECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        16 ~~l~gk~vlItG~--s~giG~~la~~l~~~G~~v~l~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      .+|+||++|||||  ++|||+++|++|+++|++|++++|+++.. +++.++   .+.++.++.+|++|+++++++++++.
T Consensus         3 ~~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~   79 (269)
T 2h7i_A            3 GLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDR---LPAKAPLLELDVQNEEHLASLAGRVT   79 (269)
T ss_dssp             CTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTT---SSSCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHh---cCCCceEEEccCCCHHHHHHHHHHHH
Confidence            4689999999999  99999999999999999999999987653 443332   24568889999999999999999999


Q ss_pred             HHcCC---cccEEEECCCCCC-----CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC
Q 024230           93 SLFNG---KLNIFVNNVGTSV-----LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA  164 (270)
Q Consensus        93 ~~~~~---~id~li~~ag~~~-----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~  164 (270)
                      +.+ +   ++|++|||||...     ..++.+.+.++|++.+++|+.+++.++++++|+|.+  .|+||++||..+ .+.
T Consensus        80 ~~~-g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~iss~~~-~~~  155 (269)
T 2h7i_A           80 EAI-GAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP--GGSIVGMDFDPS-RAM  155 (269)
T ss_dssp             HHH-CTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECCCS-SCC
T ss_pred             HHh-CCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCeEEEEcCccc-ccc
Confidence            998 6   9999999999876     467888999999999999999999999999999965  379999999876 667


Q ss_pred             CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC---Chh-------hHHHHhhcCCCC-CCCCh
Q 024230          165 NVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG---NGK-------FVDEVKSRTPMG-RLGEP  233 (270)
Q Consensus       165 ~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~---~~~-------~~~~~~~~~~~~-~~~~~  233 (270)
                      +.+..|++||+++++|+++++.|++++||+||+|+||+++|+|...+..   ...       ..+.+....|.+ ++.+|
T Consensus       156 ~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~rr~~~p  235 (269)
T 2h7i_A          156 PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDA  235 (269)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCC
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCcccCCCCH
Confidence            7888999999999999999999999999999999999999997654321   111       122344567888 69999


Q ss_pred             HhHHHHHHHHhCCCCCCccCcEEeecCCcccc
Q 024230          234 KEVSSLVAFLCMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       234 ~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                      +|+|++++||+|+.++++||++|.+|||+++.
T Consensus       236 ~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  267 (269)
T 2h7i_A          236 TPVAKTVCALLSDWLPATTGDIIYADGGAHTQ  267 (269)
T ss_dssp             HHHHHHHHHHHSSSCTTCCSEEEEESTTGGGC
T ss_pred             HHHHHHHHHHhCchhccCcceEEEecCCeeee
Confidence            99999999999999999999999999998764

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=2.2e-45  Score=311.42  Aligned_cols=239  Identities=24%  Similarity=0.344  Sum_probs=210.1

Q ss_pred             cccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           13 QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        13 ~~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      .++.+++||++|||||++|||+++|++|+++|++|++++|+++.+++..+++...+.++.++.+|++++++++++++++.
T Consensus        22 ~~m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~  101 (262)
T 3rkr_A           22 KHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVL  101 (262)
T ss_dssp             ---CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             chhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHH
Confidence            44678999999999999999999999999999999999999999999999998888899999999999999999999999


Q ss_pred             HHcCCcccEEEECCCC-CCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhh
Q 024230           93 SLFNGKLNIFVNNVGT-SVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYS  171 (270)
Q Consensus        93 ~~~~~~id~li~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~  171 (270)
                      +.+ +++|++|||||. ....++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||..+..+.++...|+
T Consensus       102 ~~~-g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  180 (262)
T 3rkr_A          102 AAH-GRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYT  180 (262)
T ss_dssp             HHH-SCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTTCHHHH
T ss_pred             Hhc-CCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCchHH
Confidence            998 799999999998 556788899999999999999999999999999999988889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCc
Q 024230          172 ATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI  251 (270)
Q Consensus       172 ~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  251 (270)
                      +||+++++|+++++.|++++||+|++|+||+++|+|......          ..+..+..+|+|+|++++||+++....+
T Consensus       181 asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~----------~~~~~~~~~p~dvA~~v~~l~s~~~~~~  250 (262)
T 3rkr_A          181 ASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLSA----------KKSALGAIEPDDIADVVALLATQADQSF  250 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------CCCHHHHHHHHHHHHTCCTTCC
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccccccc----------ccccccCCCHHHHHHHHHHHhcCccccc
Confidence            999999999999999999999999999999999998755421          1234567799999999999999999999


Q ss_pred             cCcEEeecCCc
Q 024230          252 TGQTVCIDGGF  262 (270)
Q Consensus       252 ~G~~i~vdgG~  262 (270)
                      +|+++..+.|.
T Consensus       251 ~g~~~i~p~~~  261 (262)
T 3rkr_A          251 ISEVLVRPTLK  261 (262)
T ss_dssp             EEEEEEECCCC
T ss_pred             cCcEEeccccC
Confidence            99999887763

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=1.4e-46  Score=316.23  Aligned_cols=237  Identities=28%  Similarity=0.446  Sum_probs=203.5

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .++|++|++|||||++|||++++++|+++|++|++++|+++.+++           +..+.+|++|+++++++++++.+.
T Consensus        10 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-----------~~~~~~D~~~~~~~~~~~~~~~~~   78 (247)
T 1uzm_A           10 KPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG-----------LFGVEVDVTDSDAVDRAFTAVEEH   78 (247)
T ss_dssp             CCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT-----------SEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH-----------hcCeeccCCCHHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999998765332           113789999999999999999998


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                      + +++|++|||||.....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.+....|++||
T Consensus        79 ~-g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  157 (247)
T 1uzm_A           79 Q-GPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASK  157 (247)
T ss_dssp             H-SSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHH
T ss_pred             c-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCCChhHHHHH
Confidence            8 899999999999887888899999999999999999999999999999988789999999999999888999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCc
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ  254 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  254 (270)
                      +++++|+++++.|++++||+|++|+||+++|++...+  .....+.+....|.+++.+|+|+++.++||+++.+++++|+
T Consensus       158 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~~G~  235 (247)
T 1uzm_A          158 AGVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL--DERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGA  235 (247)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS--CHHHHHHHGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCCcCC
Confidence            9999999999999999999999999999999976543  22333444556788899999999999999999888999999


Q ss_pred             EEeecCCcccc
Q 024230          255 TVCIDGGFTVN  265 (270)
Q Consensus       255 ~i~vdgG~~~~  265 (270)
                      ++.+|||+.+.
T Consensus       236 ~i~vdgG~~~~  246 (247)
T 1uzm_A          236 VIPVDGGMGMG  246 (247)
T ss_dssp             EEEESTTTTC-
T ss_pred             EEEECCCcccC
Confidence            99999998653

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=1.3e-45  Score=310.81  Aligned_cols=247  Identities=32%  Similarity=0.518  Sum_probs=221.4

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeE-EEEEccCCCHHHHHHHHHHHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKV-TGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      +.+++++|+++||||++|||++++++|+++|++|++++|+++.+++..+++   +.++ .++.+|++|.++++++++++.
T Consensus         5 ~~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (254)
T 2wsb_A            5 TVFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL---GAAVAARIVADVTDAEAMTAAAAEAE   81 (254)
T ss_dssp             TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cccceeEEEEecCCHHHHHHHHHHHH
Confidence            457799999999999999999999999999999999999998887776666   3456 889999999999999999998


Q ss_pred             HHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCC--hhh
Q 024230           93 SLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG--TVY  170 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~--~~y  170 (270)
                      + + +++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|+|++++.++||++||..+..+.+..  ..|
T Consensus        82 ~-~-~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y  159 (254)
T 2wsb_A           82 A-V-APVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSY  159 (254)
T ss_dssp             H-H-SCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCBHHH
T ss_pred             h-h-CCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCCcchHH
Confidence            8 7 79999999999988888889999999999999999999999999999998888999999999998888777  899


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCC
Q 024230          171 SATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY  250 (270)
Q Consensus       171 ~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  250 (270)
                      ++||++++.++++++.|++++||+++.|+||+++|++.......+.....+....|.++..+|+|++++++|++++.+.+
T Consensus       160 ~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  239 (254)
T 2wsb_A          160 MASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALFLASPAASY  239 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccc
Confidence            99999999999999999999999999999999999987554333344455555677888999999999999999988889


Q ss_pred             ccCcEEeecCCcccc
Q 024230          251 ITGQTVCIDGGFTVN  265 (270)
Q Consensus       251 ~~G~~i~vdgG~~~~  265 (270)
                      ++|+++.+|||+..+
T Consensus       240 ~~G~~~~v~gG~~~~  254 (254)
T 2wsb_A          240 VTGAILAVDGGYTVW  254 (254)
T ss_dssp             CCSCEEEESTTGGGC
T ss_pred             ccCCEEEECCCEecC
Confidence            999999999998753

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=3.5e-46  Score=316.79  Aligned_cols=239  Identities=28%  Similarity=0.425  Sum_probs=214.7

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      ++|++|++|||||++|||+++|++|+++|++|++++|+++.           +.++.++.+|++|+++++++++++.+.+
T Consensus         4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   72 (264)
T 2dtx_A            4 SDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----------EAKYDHIECDVTNPDQVKASIDHIFKEY   72 (264)
T ss_dssp             GGGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-----------SCSSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-----------CCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            46889999999999999999999999999999999998764           3567889999999999999999999998


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKG  175 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKa  175 (270)
                       +++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||..+..+.++...|++||+
T Consensus        73 -g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  151 (264)
T 2dtx_A           73 -GSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKH  151 (264)
T ss_dssp             -SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCCchhHHHHHH
Confidence             7999999999998888889999999999999999999999999999998887899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEecCcccCCCCcccc-----CCh----hhHHHHhhcCCCCCCCChHhHHHHHHHHhCC
Q 024230          176 AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLL-----GNG----KFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP  246 (270)
Q Consensus       176 al~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~-----~~~----~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (270)
                      ++++|+++++.|+++. |+|++|+||+++|++.....     ...    ...+.+....|.+++.+|+|+|++++||+++
T Consensus       152 a~~~~~~~la~e~~~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~  230 (264)
T 2dtx_A          152 AVIGLTKSIALDYAPL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASR  230 (264)
T ss_dssp             HHHHHHHHHHHHHTTT-SEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHhcCC-cEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence            9999999999999998 99999999999998765431     011    2233344556888999999999999999999


Q ss_pred             CCCCccCcEEeecCCcccccc
Q 024230          247 AASYITGQTVCIDGGFTVNGF  267 (270)
Q Consensus       247 ~~~~~~G~~i~vdgG~~~~~~  267 (270)
                      .+++++|+++.+|||+.+..+
T Consensus       231 ~~~~~tG~~i~vdGG~~~~~p  251 (264)
T 2dtx_A          231 EASFITGTCLYVDGGLSIRAP  251 (264)
T ss_dssp             GGTTCCSCEEEESTTGGGCCC
T ss_pred             hhcCCCCcEEEECCCcccCCC
Confidence            889999999999999987654

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=1.2e-45  Score=315.95  Aligned_cols=243  Identities=24%  Similarity=0.351  Sum_probs=217.5

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      .+++++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++   +.++.++.+|++++++++++++++ +
T Consensus        24 ~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~-~   99 (281)
T 3ppi_A           24 TIKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL---GNRAEFVSTNVTSEDSVLAAIEAA-N   99 (281)
T ss_dssp             CCGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHH-T
T ss_pred             hhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHH-H
Confidence            357899999999999999999999999999999999999999888877766   567999999999999999999998 6


Q ss_pred             HcCCcccEEEEC-CCCCCCCCC-----CCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh------cCCcEEEEecCcccc
Q 024230           94 LFNGKLNIFVNN-VGTSVLKPT-----LEYNAEDFSLVMSTNFESAFHLCQLAHPLLRA------SGAASIVLMSSALGI  161 (270)
Q Consensus        94 ~~~~~id~li~~-ag~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~------~~~g~ii~iss~~~~  161 (270)
                      .+ +++|++||| +|.....++     .+.+.++|++.+++|+.++++++++++|.|.+      ++.|+||++||..+.
T Consensus       100 ~~-~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  178 (281)
T 3ppi_A          100 QL-GRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGY  178 (281)
T ss_dssp             TS-SEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGT
T ss_pred             Hh-CCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEeccccc
Confidence            66 799999999 665544444     36899999999999999999999999999987      567899999999999


Q ss_pred             ccCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCC-CCCCChHhHHHHH
Q 024230          162 VSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPM-GRLGEPKEVSSLV  240 (270)
Q Consensus       162 ~~~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~  240 (270)
                      .+.++...|++||+|+++|+++++.|++++||+|++|+||+++|++...+  .......+....+. ++..+|+|+|+++
T Consensus       179 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~~~~~pedvA~~v  256 (281)
T 3ppi_A          179 EGQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESV--GEEALAKFAANIPFPKRLGTPDEFADAA  256 (281)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTT--CHHHHHHHHHTCCSSSSCBCHHHHHHHH
T ss_pred             CCCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcc--cHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence            99999999999999999999999999999999999999999999987665  34455566666777 8899999999999


Q ss_pred             HHHhCCCCCCccCcEEeecCCcccc
Q 024230          241 AFLCMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       241 ~~l~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                      +||+++  ++++|++|.+|||+.+.
T Consensus       257 ~~l~s~--~~~tG~~i~vdGG~~~~  279 (281)
T 3ppi_A          257 AFLLTN--GYINGEVMRLDGAQRFT  279 (281)
T ss_dssp             HHHHHC--SSCCSCEEEESTTCCCC
T ss_pred             HHHHcC--CCcCCcEEEECCCcccC
Confidence            999974  78999999999999864

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-46  Score=316.15  Aligned_cols=239  Identities=26%  Similarity=0.392  Sum_probs=208.6

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      .+|+||+++||||++|||++++++|+++|++|++++|+++.+++.. ++    .++.++.+|++|++++++++    +.+
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~----~~~~~~~~D~~~~~~~~~~~----~~~   72 (246)
T 2ag5_A            2 GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY----PGIQTRVLDVTKKKQIDQFA----NEV   72 (246)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS----TTEEEEECCTTCHHHHHHHH----HHC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc----cCceEEEeeCCCHHHHHHHH----HHh
Confidence            4688999999999999999999999999999999999987765443 22    26888999999999988443    445


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCC-CChhhhhhH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSAN-VGTVYSATK  174 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~-~~~~y~~sK  174 (270)
                       +++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|+|.+++.|+||++||..+..+.+ +...|++||
T Consensus        73 -~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sK  151 (246)
T 2ag5_A           73 -ERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTK  151 (246)
T ss_dssp             -SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHH
T ss_pred             -CCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCCCCccHHHHH
Confidence             799999999999888888899999999999999999999999999999888789999999999988877 888999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC----ChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCC
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG----NGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY  250 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  250 (270)
                      +++++|+++++.|++++||+|++|+||+++|++......    .....+.+....|.++..+|+|+|++++||+++.+++
T Consensus       152 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~  231 (246)
T 2ag5_A          152 AAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAY  231 (246)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccC
Confidence            999999999999999999999999999999997543211    1222334555678889999999999999999998999


Q ss_pred             ccCcEEeecCCccc
Q 024230          251 ITGQTVCIDGGFTV  264 (270)
Q Consensus       251 ~~G~~i~vdgG~~~  264 (270)
                      +||+++.+|||+++
T Consensus       232 ~tG~~i~vdgG~~~  245 (246)
T 2ag5_A          232 VTGNPVIIDGGWSL  245 (246)
T ss_dssp             CCSCEEEECTTGGG
T ss_pred             CCCCEEEECCCccC
Confidence            99999999999864

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=1e-45  Score=324.98  Aligned_cols=238  Identities=21%  Similarity=0.290  Sum_probs=215.4

Q ss_pred             cccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhH-------HHHHHHHHHhcCCeEEEEEccCCCHHHHH
Q 024230           13 QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETE-------LNECIHHLQMKGLKVTGSVCDVSSRPQRQ   85 (270)
Q Consensus        13 ~~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   85 (270)
                      .++.+|+||++|||||++|||+++|++|+++|++|++++|+.+.       +++..+++...+.++.++.+|++|+++++
T Consensus        38 ~~~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~  117 (346)
T 3kvo_A           38 PNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQIS  117 (346)
T ss_dssp             CCCSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHH
T ss_pred             ccCCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHH
Confidence            34578999999999999999999999999999999999998874       56677778888889999999999999999


Q ss_pred             HHHHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccccc--
Q 024230           86 TLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVS--  163 (270)
Q Consensus        86 ~~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~--  163 (270)
                      ++++++.+.+ +++|+||||||.....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+  
T Consensus       118 ~~~~~~~~~~-g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~  196 (346)
T 3kvo_A          118 AAVEKAIKKF-GGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVW  196 (346)
T ss_dssp             HHHHHHHHHH-SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGG
T ss_pred             HHHHHHHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCC
Confidence            9999999999 7999999999998888999999999999999999999999999999999988899999999999887  


Q ss_pred             CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCc-ccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHH
Q 024230          164 ANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWY-IRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAF  242 (270)
Q Consensus       164 ~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  242 (270)
                      .++...|++||+++++|+++++.|++ .||+||+|+||+ ++|++...          +....+.++..+|+|+|++++|
T Consensus       197 ~~~~~~Y~aSKaal~~l~~~la~e~~-~gIrvn~v~PG~~i~T~~~~~----------~~~~~~~~r~~~pedvA~~v~~  265 (346)
T 3kvo_A          197 FKQHCAYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAMDM----------LGGPGIESQCRKVDIIADAAYS  265 (346)
T ss_dssp             TSSSHHHHHHHHHHHHHHHHHHHHTT-TTCEEEEEECSBCBCCHHHHH----------HCC--CGGGCBCTHHHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCccccHHHHh----------hccccccccCCCHHHHHHHHHH
Confidence            67889999999999999999999999 999999999995 88875432          2223456778899999999999


Q ss_pred             HhCCCCCCccCcEEeecCCccc
Q 024230          243 LCMPAASYITGQTVCIDGGFTV  264 (270)
Q Consensus       243 l~s~~~~~~~G~~i~vdgG~~~  264 (270)
                      |+++ ++++||+++ +|||+..
T Consensus       266 L~s~-~~~itG~~i-vdgg~~~  285 (346)
T 3kvo_A          266 IFQK-PKSFTGNFV-IDENILK  285 (346)
T ss_dssp             HHTS-CTTCCSCEE-EHHHHHH
T ss_pred             HHhc-CCCCCceEE-ECCcEeh
Confidence            9999 999999999 9999653

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=1.7e-45  Score=314.59  Aligned_cols=248  Identities=27%  Similarity=0.449  Sum_probs=220.2

Q ss_pred             cccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           13 QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        13 ~~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      ...|++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++...+.++.++.+|++|+++++++++++.
T Consensus        27 ~~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~  106 (279)
T 3ctm_A           27 LDLFSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQE  106 (279)
T ss_dssp             GGGGCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHH
Confidence            33467999999999999999999999999999999999999887777777776667789999999999999999999999


Q ss_pred             HHcCCcccEEEECCCCCCC-CCCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccccc--CCCCh
Q 024230           93 SLFNGKLNIFVNNVGTSVL-KPTL-EYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVS--ANVGT  168 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~~-~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~--~~~~~  168 (270)
                      +.+ +++|++|||||.... .++. +.+.++|++.+++|+.+++.+++.++|+|++++.++||++||..+..+  .+...
T Consensus       107 ~~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~  185 (279)
T 3ctm_A          107 KDF-GTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQA  185 (279)
T ss_dssp             HHH-SCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---CCHH
T ss_pred             HHh-CCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCCCCcc
Confidence            988 799999999998766 6776 888999999999999999999999999999888899999999999887  77888


Q ss_pred             hhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCC
Q 024230          169 VYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAA  248 (270)
Q Consensus       169 ~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  248 (270)
                      .|++||++++.|+++++.|++++| +|+.|+||+++|++....  .+.....+....|.+++.+|+|+++.++||+++.+
T Consensus       186 ~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~  262 (279)
T 3ctm_A          186 PYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFA--SKDMKAKWWQLTPLGREGLTQELVGGYLYLASNAS  262 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSC--CHHHHHHHHHHSTTCSCBCGGGTHHHHHHHHSGGG
T ss_pred             cHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccccc--ChHHHHHHHHhCCccCCcCHHHHHHHHHHHhCccc
Confidence            999999999999999999999999 999999999999987532  23333444456788889999999999999999888


Q ss_pred             CCccCcEEeecCCccc
Q 024230          249 SYITGQTVCIDGGFTV  264 (270)
Q Consensus       249 ~~~~G~~i~vdgG~~~  264 (270)
                      ++++|+++.+|||+.+
T Consensus       263 ~~~tG~~i~vdgG~~~  278 (279)
T 3ctm_A          263 TFTTGSDVVIDGGYTC  278 (279)
T ss_dssp             TTCCSCEEEESTTCCC
T ss_pred             cCccCCEEEECCCeec
Confidence            9999999999999875

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=5.1e-45  Score=306.65  Aligned_cols=239  Identities=24%  Similarity=0.322  Sum_probs=212.4

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      +|+||+++||||++|||+++|++|+++|++|++++|+++.+++..+++...+.++.++.+|++|+++++++++++.+.+ 
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-   82 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEAL-   82 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            5789999999999999999999999999999999999999888888887777789999999999999999999999998 


Q ss_pred             CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHH
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGA  176 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaa  176 (270)
                      +++|++|||||.....++.+.+.++|++++++|+.+++.++++++|+|.+++ |+||++||..+..+.++...|++||++
T Consensus        83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a  161 (247)
T 2jah_A           83 GGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVRNAAVYQATKFG  161 (247)
T ss_dssp             SCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCCCCCcHHHHHHHH
Confidence            8999999999998888889999999999999999999999999999998877 999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCC--CChHhHHHHHHHHhCCCCCCccCc
Q 024230          177 MNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRL--GEPKEVSSLVAFLCMPAASYITGQ  254 (270)
Q Consensus       177 l~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~dva~~~~~l~s~~~~~~~G~  254 (270)
                      +++|+++++.|++++||+|++|+||+++|+|...... ........ ..| +++  .+|+|+++.++|++++...+++++
T Consensus       162 ~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~~-~~~-~~~~~~~pedvA~~v~~l~s~~~~~~~~~  238 (247)
T 2jah_A          162 VNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITH-TATKEMYE-QRI-SQIRKLQAQDIAEAVRYAVTAPHHATVHE  238 (247)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCC-HHHHHHHH-HHT-TTSCCBCHHHHHHHHHHHHHSCTTEEEEE
T ss_pred             HHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccc-hhhHHHHH-hcc-cccCCCCHHHHHHHHHHHhCCCccCccce
Confidence            9999999999999999999999999999998765421 11111121 223 455  899999999999999988888877


Q ss_pred             EEeecCC
Q 024230          255 TVCIDGG  261 (270)
Q Consensus       255 ~i~vdgG  261 (270)
                      + .+++.
T Consensus       239 i-~i~~~  244 (247)
T 2jah_A          239 I-FIRPT  244 (247)
T ss_dssp             E-EEEET
T ss_pred             E-EecCC
Confidence            4 55543

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=8.6e-46  Score=314.67  Aligned_cols=244  Identities=19%  Similarity=0.211  Sum_probs=213.3

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      +..++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..      ..++.++.+|++|+++++++++++.+
T Consensus        10 m~~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~------~~~~~~~~~Dv~d~~~v~~~~~~~~~   83 (266)
T 3p19_A           10 MGRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN------LPNTLCAQVDVTDKYTFDTAITRAEK   83 (266)
T ss_dssp             -----CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC------CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh------cCCceEEEecCCCHHHHHHHHHHHHH
Confidence            345789999999999999999999999999999999999987765421      23688899999999999999999999


Q ss_pred             HcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhh
Q 024230           94 LFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                      .+ +++|+||||||.....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.++...|++|
T Consensus        84 ~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~as  162 (266)
T 3p19_A           84 IY-GPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGT  162 (266)
T ss_dssp             HH-CSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             HC-CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCCchHHHH
Confidence            98 89999999999988889999999999999999999999999999999998888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHh-hcCCCCCCCChHhHHHHHHHHhCCCCCCcc
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVK-SRTPMGRLGEPKEVSSLVAFLCMPAASYIT  252 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  252 (270)
                      |+++++|+++++.|++++||+|++|+||+++|++....... ....... ...+.+++.+|+|+|++++||+++.....+
T Consensus       163 K~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~r~~~pedvA~av~~l~~~~~~~~~  241 (266)
T 3p19_A          163 KFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQ-QIKDGYDAWRVDMGGVLAADDVARAVLFAYQQPQNVCI  241 (266)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCH-HHHHHHHHHHHHTTCCBCHHHHHHHHHHHHHSCTTEEE
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccch-hhhHHHHhhcccccCCCCHHHHHHHHHHHHcCCCCccc
Confidence            99999999999999999999999999999999988765422 2122221 234778899999999999999999999999


Q ss_pred             CcEEeecCCcccc
Q 024230          253 GQTVCIDGGFTVN  265 (270)
Q Consensus       253 G~~i~vdgG~~~~  265 (270)
                      ++++....+....
T Consensus       242 ~~i~i~p~~~~~~  254 (266)
T 3p19_A          242 REIALAPTKQQPK  254 (266)
T ss_dssp             EEEEEEETTCCC-
T ss_pred             eeeEEecCCCCCc
Confidence            9998888776543

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=1.4e-45  Score=309.44  Aligned_cols=246  Identities=30%  Similarity=0.497  Sum_probs=199.5

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEe-eCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTC-SRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      |++++|+++||||++|||++++++|+++|++|+++ .|+++..++..++++..+.++.++.+|++|+++++++++++.+.
T Consensus         1 M~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (247)
T 2hq1_A            1 MQLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDA   80 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            46889999999999999999999999999999998 67777777777788777778999999999999999999999998


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                      + +++|++|||||.....++.+.+.++|++.+++|+.+++.+++++.|+|++++.++||++||..+..+.+....|++||
T Consensus        81 ~-~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  159 (247)
T 2hq1_A           81 F-GRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASK  159 (247)
T ss_dssp             H-SCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------CHHHHHHH
T ss_pred             c-CCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcHhHHHH
Confidence            8 799999999999877778888999999999999999999999999999888789999999999988888899999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCc
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ  254 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  254 (270)
                      ++++.|+++++.|+++.||+++.++||+++|++...+  .+...+.+....|.+++.+|+|+++++.+++++.+.+++|+
T Consensus       160 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  237 (247)
T 2hq1_A          160 AGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVL--PDKVKEMYLNNIPLKRFGTPEEVANVVGFLASDDSNYITGQ  237 (247)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS--CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhc--chHHHHHHHhhCCCCCCCCHHHHHHHHHHHcCcccccccCc
Confidence            9999999999999999999999999999999876543  22333445555677889999999999999999888899999


Q ss_pred             EEeecCCccc
Q 024230          255 TVCIDGGFTV  264 (270)
Q Consensus       255 ~i~vdgG~~~  264 (270)
                      ++.+|||+++
T Consensus       238 ~~~v~gG~~~  247 (247)
T 2hq1_A          238 VINIDGGLVM  247 (247)
T ss_dssp             EEEESTTC--
T ss_pred             EEEeCCCccC
Confidence            9999999863

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=8.1e-46  Score=310.94  Aligned_cols=233  Identities=24%  Similarity=0.288  Sum_probs=205.2

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEe-e--CChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTC-S--RTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~-~--r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      ||++|||||++|||+++|++|+++|++|+++ +  |+++.+++..+++  .+.       |+.|+++++++++++.+.+ 
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~--~~~-------~~~~~~~v~~~~~~~~~~~-   70 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN--PGT-------IALAEQKPERLVDATLQHG-   70 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS--TTE-------EECCCCCGGGHHHHHGGGS-
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh--CCC-------cccCHHHHHHHHHHHHHHc-
Confidence            5899999999999999999999999999999 6  9988887766655  222       2237778888999998888 


Q ss_pred             CcccEEEECCCCCCC---CCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhh
Q 024230           97 GKLNIFVNNVGTSVL---KPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        97 ~~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                      +++|+||||||....   .++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.++...|++|
T Consensus        71 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as  150 (244)
T 1zmo_A           71 EAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPA  150 (244)
T ss_dssp             SCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTCTTHHHH
T ss_pred             CCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCchHHHHH
Confidence            799999999999877   88899999999999999999999999999999998888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCC---ccccCChhhHHHHhh-cCCCCCCCChHhHHHHHHHHhCCCCC
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFT---EPLLGNGKFVDEVKS-RTPMGRLGEPKEVSSLVAFLCMPAAS  249 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~dva~~~~~l~s~~~~  249 (270)
                      |+++++|+++++.|++++||+|++|+||+++|+|.   ..+... ...+.+.. ..|.++..+|+|+|+.++||+++.++
T Consensus       151 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~p~~r~~~pe~vA~~v~~l~s~~~~  229 (244)
T 1zmo_A          151 RAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENN-PELRERVDRDVPLGRLGRPDEMGALITFLASRRAA  229 (244)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHC-HHHHHHHHHHCTTCSCBCHHHHHHHHHHHHTTTTG
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccch-HHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCcccc
Confidence            99999999999999999999999999999999987   443211 22233334 57888999999999999999999999


Q ss_pred             CccCcEEeecCCcc
Q 024230          250 YITGQTVCIDGGFT  263 (270)
Q Consensus       250 ~~~G~~i~vdgG~~  263 (270)
                      ++||+++.+|||+.
T Consensus       230 ~~tG~~i~vdgG~~  243 (244)
T 1zmo_A          230 PIVGQFFAFTGGYL  243 (244)
T ss_dssp             GGTTCEEEESTTCC
T ss_pred             CccCCEEEeCCCCC
Confidence            99999999999974

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=1.2e-44  Score=305.04  Aligned_cols=248  Identities=29%  Similarity=0.472  Sum_probs=224.8

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .+++++|+++||||++|||++++++|+++|++|++++|+++.+++..++++..+.++.++.+|++|+++++++++++.+.
T Consensus         6 ~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   85 (255)
T 1fmc_A            6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK   85 (255)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            46789999999999999999999999999999999999999888888888777778999999999999999999999998


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                      + +++|++|||||.....++ +.+.++|++.+++|+.++++++++++|+|++++.++||++||..++.+.++...|++||
T Consensus        86 ~-~~~d~vi~~Ag~~~~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  163 (255)
T 1fmc_A           86 L-GKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSK  163 (255)
T ss_dssp             H-SSCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHH
T ss_pred             c-CCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCCcccHHHH
Confidence            8 799999999998776666 78999999999999999999999999999888789999999999999888899999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCc
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ  254 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  254 (270)
                      ++++.++++++.|+++.||+++.++||++.|++..... .+..........|.+++.+|+|++++++|++++...+++|+
T Consensus       164 ~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  242 (255)
T 1fmc_A          164 AAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVI-TPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQ  242 (255)
T ss_dssp             HHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC-CHHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhcc-ChHHHHHHHhcCCcccCCCHHHHHHHHHHHhCCccccCCCc
Confidence            99999999999999999999999999999998765432 23344455566788889999999999999999888899999


Q ss_pred             EEeecCCcccc
Q 024230          255 TVCIDGGFTVN  265 (270)
Q Consensus       255 ~i~vdgG~~~~  265 (270)
                      ++.+|||...+
T Consensus       243 ~~~v~gg~~~s  253 (255)
T 1fmc_A          243 ILTVSGGGVQE  253 (255)
T ss_dssp             EEEESTTSCCC
T ss_pred             EEEECCceecc
Confidence            99999998764

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=7.3e-45  Score=305.78  Aligned_cols=246  Identities=28%  Similarity=0.466  Sum_probs=218.9

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      .++++|+++||||++|||++++++|+++|++|++++|+++..++..+++... .++.++.+|++|+++++++++++.+.+
T Consensus         2 ~~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (251)
T 1zk4_A            2 NRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP-DQIQFFQHDSSDEDGWTKLFDATEKAF   80 (251)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-TTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc-CceEEEECCCCCHHHHHHHHHHHHHHh
Confidence            3578999999999999999999999999999999999998887777666433 578899999999999999999999988


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-cEEEEecCccccccCCCChhhhhhH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGA-ASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~-g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                       +++|++|||||.....++.+.+.++|++.+++|+.+++.+++.++|.|++++. ++||++||..++.+.+....|++||
T Consensus        81 -~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  159 (251)
T 1zk4_A           81 -GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASK  159 (251)
T ss_dssp             -SSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCCCccchHHH
Confidence             79999999999988788889999999999999999999999999999988776 8999999999999989999999999


Q ss_pred             HHHHHHHHHHHHHHc--cCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCcc
Q 024230          175 GAMNQLAKNLACEWA--KDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT  252 (270)
Q Consensus       175 aal~~~~~sla~el~--~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  252 (270)
                      ++++.|+++++.|+.  +.||+++.|+||+++|++..... ............|.+++.+|+|++++++|++++...+++
T Consensus       160 ~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  238 (251)
T 1zk4_A          160 GAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLP-GAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFAT  238 (251)
T ss_dssp             HHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTST-THHHHHTSTTTCTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcC-chhhhHHHhhcCCCCCCcCHHHHHHHHHHHcCccccccc
Confidence            999999999999998  88999999999999999876531 111122233445778889999999999999998888999


Q ss_pred             CcEEeecCCccc
Q 024230          253 GQTVCIDGGFTV  264 (270)
Q Consensus       253 G~~i~vdgG~~~  264 (270)
                      |+++.+|||+++
T Consensus       239 G~~~~v~gG~~~  250 (251)
T 1zk4_A          239 GSEFVVDGGYTA  250 (251)
T ss_dssp             SCEEEESTTGGG
T ss_pred             CcEEEECCCccC
Confidence            999999999875

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=3.3e-45  Score=307.41  Aligned_cols=234  Identities=27%  Similarity=0.335  Sum_probs=210.3

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcC-CeEEEEEccC--CCHHHHHHHHHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG-LKVTGSVCDV--SSRPQRQTLINT   90 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~--~~~~~~~~~~~~   90 (270)
                      .+..++||+++||||++|||+++|++|+++|++|++++|+++.+++..+++...+ .++.++.+|+  ++.+++++++++
T Consensus         8 ~~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~   87 (247)
T 3i1j_A            8 HPELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAAR   87 (247)
T ss_dssp             CTTTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred             CCccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHH
Confidence            3467899999999999999999999999999999999999999999988888765 4566677777  999999999999


Q ss_pred             HHHHcCCcccEEEECCCCC-CCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChh
Q 024230           91 VSSLFNGKLNIFVNNVGTS-VLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTV  169 (270)
Q Consensus        91 i~~~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~  169 (270)
                      +.+.+ +++|++|||||.. ...++.+.+.++|++++++|+.+++.++++++|+|++++.++||++||..+..+.++...
T Consensus        88 ~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~  166 (247)
T 3i1j_A           88 VEHEF-GRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGA  166 (247)
T ss_dssp             HHHHH-SCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTTCHH
T ss_pred             HHHhC-CCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCCcch
Confidence            99998 7999999999985 567788999999999999999999999999999999888899999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHHcc-CCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCC
Q 024230          170 YSATKGAMNQLAKNLACEWAK-DNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAA  248 (270)
Q Consensus       170 y~~sKaal~~~~~sla~el~~-~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  248 (270)
                      |++||+|+++|+++++.|+.+ .||+|++|+||+++|+|........          ...+...|+|+++.++||+++++
T Consensus       167 Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~~~~----------~~~~~~~p~dva~~~~~l~s~~~  236 (247)
T 3i1j_A          167 YGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAYPDE----------NPLNNPAPEDIMPVYLYLMGPDS  236 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHSTTS----------CGGGSCCGGGGTHHHHHHHSGGG
T ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhccccc----------CccCCCCHHHHHHHHHHHhCchh
Confidence            999999999999999999987 8999999999999998764432211          11245689999999999999999


Q ss_pred             CCccCcEEee
Q 024230          249 SYITGQTVCI  258 (270)
Q Consensus       249 ~~~~G~~i~v  258 (270)
                      +++||++|.+
T Consensus       237 ~~itG~~i~~  246 (247)
T 3i1j_A          237 TGINGQALNA  246 (247)
T ss_dssp             TTCCSCEEEC
T ss_pred             ccccCeeecC
Confidence            9999999986

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=9.8e-45  Score=304.35  Aligned_cols=245  Identities=31%  Similarity=0.459  Sum_probs=221.6

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQM-KGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      +++++|+++||||++|||++++++|+++|++|++++|+++.+++..+++.. .+.++.++.+|++|+++++++++++.+.
T Consensus         3 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (248)
T 2pnf_A            3 IKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNL   82 (248)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            568999999999999999999999999999999999999888887777765 4668999999999999999999999999


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                      + +++|++|||||.....++.+.+.++|++.+++|+.++++++++++|+|.+++.++||++||..+..+.++...|++||
T Consensus        83 ~-~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  161 (248)
T 2pnf_A           83 V-DGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTK  161 (248)
T ss_dssp             S-SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred             c-CCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCCCchHHHHH
Confidence            8 799999999999877788889999999999999999999999999999888789999999999888888899999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCc
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ  254 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  254 (270)
                      ++++.++++++.|+.+.||+++.++||+++|++...+  .......+....|.+++.+|+|+++++++++++...+++|+
T Consensus       162 ~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  239 (248)
T 2pnf_A          162 AGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVL--SEEIKQKYKEQIPLGRFGSPEEVANVVLFLCSELASYITGE  239 (248)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS--CHHHHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhc--cHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCchhhcCCCc
Confidence            9999999999999999999999999999999987643  22333444455677888999999999999999878899999


Q ss_pred             EEeecCCcc
Q 024230          255 TVCIDGGFT  263 (270)
Q Consensus       255 ~i~vdgG~~  263 (270)
                      ++.+|||+.
T Consensus       240 ~~~v~gg~~  248 (248)
T 2pnf_A          240 VIHVNGGMF  248 (248)
T ss_dssp             EEEESTTCC
T ss_pred             EEEeCCCcC
Confidence            999999973

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=6.8e-45  Score=304.72  Aligned_cols=241  Identities=28%  Similarity=0.443  Sum_probs=219.2

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEE-eeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHT-CSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l-~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      ||+++||||++|||++++++|+++|++|++ ++|+++..+++.++++..+.++.++.+|++++++++++++++.+.+ ++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~   79 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAW-GT   79 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHS-SC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHc-CC
Confidence            689999999999999999999999999998 5899888888888887777789999999999999999999999998 79


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHHH
Q 024230           99 LNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMN  178 (270)
Q Consensus        99 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal~  178 (270)
                      +|++|||||.....++.+.+.++|++.+++|+.+++++++++.|+|.+++.++||++||..+..+.+....|++||++++
T Consensus        80 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  159 (244)
T 1edo_A           80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVI  159 (244)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCCCccchhhHHHHH
Confidence            99999999998878888899999999999999999999999999998887899999999999888889999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHh-CCCCCCccCcEEe
Q 024230          179 QLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLC-MPAASYITGQTVC  257 (270)
Q Consensus       179 ~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~-s~~~~~~~G~~i~  257 (270)
                      .|+++++.|+.++||+++.|+||+++|++...+  .......+....|.+++.+|+|++++++|++ ++.+.+++|+++.
T Consensus       160 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~  237 (244)
T 1edo_A          160 GFSKTAAREGASRNINVNVVCPGFIASDMTAKL--GEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFT  237 (244)
T ss_dssp             HHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT--CHHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSGGGGCCSCEEE
T ss_pred             HHHHHHHHHhhhcCCEEEEEeeCccccchhhhc--ChHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCccCCcCCCEEE
Confidence            999999999999999999999999999876553  2233344555678888999999999999999 6778899999999


Q ss_pred             ecCCcc
Q 024230          258 IDGGFT  263 (270)
Q Consensus       258 vdgG~~  263 (270)
                      +|||+.
T Consensus       238 v~gG~~  243 (244)
T 1edo_A          238 IDGGIA  243 (244)
T ss_dssp             ESTTTT
T ss_pred             eCCCcc
Confidence            999986

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=7.1e-45  Score=308.10  Aligned_cols=248  Identities=31%  Similarity=0.484  Sum_probs=218.6

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQM-KGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++.. .+.++.++.+|++|+++++++++++.+
T Consensus         9 ~~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   88 (265)
T 1h5q_A            9 TISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDA   88 (265)
T ss_dssp             EECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999977665555555543 366799999999999999999999999


Q ss_pred             HcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCccccccCCC------
Q 024230           94 LFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIVSANV------  166 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~~~~~~~~------  166 (270)
                      .+ +++|++|||||.....++.+.+.++|++.+++|+.+++.+++++.|+|.+++ .++||++||..+..+.+.      
T Consensus        89 ~~-~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~  167 (265)
T 1h5q_A           89 DL-GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSL  167 (265)
T ss_dssp             HS-CSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEEC
T ss_pred             hc-CCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccccccc
Confidence            88 7999999999998888888899999999999999999999999999998765 489999999988766532      


Q ss_pred             -ChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhC
Q 024230          167 -GTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCM  245 (270)
Q Consensus       167 -~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (270)
                       ...|++||++++.|+++++.|++++||+++.|+||+++|++....  .+..........+.+++.+|+|++++++||++
T Consensus       168 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  245 (265)
T 1h5q_A          168 TQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM--DKKIRDHQASNIPLNRFAQPEEMTGQAILLLS  245 (265)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS--CHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHS
T ss_pred             cccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccccccc--chhHHHHHHhcCcccCCCCHHHHHHHHHhhcc
Confidence             678999999999999999999999999999999999999987654  23334445556788889999999999999999


Q ss_pred             CCCCCccCcEEeecCCcccc
Q 024230          246 PAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       246 ~~~~~~~G~~i~vdgG~~~~  265 (270)
                      +.+++++|+++.+|||++++
T Consensus       246 ~~~~~~~G~~~~v~gG~~~~  265 (265)
T 1h5q_A          246 DHATYMTGGEYFIDGGQLIW  265 (265)
T ss_dssp             GGGTTCCSCEEEECTTGGGC
T ss_pred             CchhcCcCcEEEecCCEeCC
Confidence            88899999999999998753

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=6.1e-45  Score=308.45  Aligned_cols=247  Identities=32%  Similarity=0.472  Sum_probs=212.7

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcC-------CeEEEEEccCCCHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG-------LKVTGSVCDVSSRPQRQTLI   88 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~   88 (270)
                      .++++|+++||||++|||++++++|+++|++|++++|+++.+++..+++...+       .++.++.+|++|++++++++
T Consensus         3 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   82 (264)
T 2pd6_A            3 NRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLL   82 (264)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHH
Confidence            35789999999999999999999999999999999999988877776665444       57889999999999999999


Q ss_pred             HHHHHHcCCcc-cEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCccccccCCC
Q 024230           89 NTVSSLFNGKL-NIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIVSANV  166 (270)
Q Consensus        89 ~~i~~~~~~~i-d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~~~~~~~~  166 (270)
                      +++.+.+ +++ |++|||||.....++.+.+.++|++.+++|+.+++++++++.|+|.+++ .++||++||..+..+.++
T Consensus        83 ~~~~~~~-g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  161 (264)
T 2pd6_A           83 EQVQACF-SRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVG  161 (264)
T ss_dssp             HHHHHHH-SSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCTT
T ss_pred             HHHHHHh-CCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCCC
Confidence            9999988 788 9999999998878888899999999999999999999999999998876 689999999999999899


Q ss_pred             ChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCC
Q 024230          167 GTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP  246 (270)
Q Consensus       167 ~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (270)
                      ...|++||++++.|+++++.|++++||+++.|+||++.|++.....  ....+.+....|.+++.+|+|+++++++++++
T Consensus       162 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  239 (264)
T 2pd6_A          162 QTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVP--QKVVDKITEMIPMGHLGDPEDVADVVAFLASE  239 (264)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC------------CTGGGCTTCSCBCHHHHHHHHHHHHSG
T ss_pred             ChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcC--HHHHHHHHHhCCCCCCCCHHHHHHHHHHHcCC
Confidence            9999999999999999999999999999999999999999876432  22233334456778889999999999999998


Q ss_pred             CCCCccCcEEeecCCcccc
Q 024230          247 AASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       247 ~~~~~~G~~i~vdgG~~~~  265 (270)
                      ...+++|+.+.+|||+.+.
T Consensus       240 ~~~~~~G~~~~v~gg~~~~  258 (264)
T 2pd6_A          240 DSGYITGTSVEVTGGLFMA  258 (264)
T ss_dssp             GGTTCCSCEEEESTTC---
T ss_pred             cccCCCCCEEEECCCceec
Confidence            8889999999999998764

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=1.1e-46  Score=329.57  Aligned_cols=245  Identities=18%  Similarity=0.193  Sum_probs=209.3

Q ss_pred             CCCEEEEecCCC--cHHHHHHHHHHHCCCeEEEeeCChh---------HHHHHHHHHHhc---CCeEEEEEccCCCH--H
Q 024230           19 QGMTALVTGGTK--GLGLAVVEELSMLGATVHTCSRTET---------ELNECIHHLQMK---GLKVTGSVCDVSSR--P   82 (270)
Q Consensus        19 ~gk~vlItG~s~--giG~~la~~l~~~G~~v~l~~r~~~---------~~~~~~~~~~~~---~~~~~~~~~D~~~~--~   82 (270)
                      ++|++||||+++  |||+++|++|+++|++|++++|++.         .++.....+...   ...+.++.+|+++.  +
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            479999999986  9999999999999999998776652         221111111111   23478889999988  7


Q ss_pred             ------------------HHHHHHHHHHHHcCCcccEEEECCCCC--CCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHH
Q 024230           83 ------------------QRQTLINTVSSLFNGKLNIFVNNVGTS--VLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHP  142 (270)
Q Consensus        83 ------------------~~~~~~~~i~~~~~~~id~li~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  142 (270)
                                        +++++++++.+.+ +++|+||||||+.  ...++.+.+.++|++++++|+.+++.++++++|
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~-g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p  159 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKY-GKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVN  159 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHH-CCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhc-CCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence                              9999999999998 8999999999974  467888999999999999999999999999999


Q ss_pred             HHHhcCCcEEEEecCccccccCCCCh-hhhhhHHHHHHHHHHHHHHHcc-CCceEEEEecCcccCCCCccccCCh-----
Q 024230          143 LLRASGAASIVLMSSALGIVSANVGT-VYSATKGAMNQLAKNLACEWAK-DNIRTNSVAPWYIRTPFTEPLLGNG-----  215 (270)
Q Consensus       143 ~m~~~~~g~ii~iss~~~~~~~~~~~-~y~~sKaal~~~~~sla~el~~-~~i~v~~v~pG~v~t~~~~~~~~~~-----  215 (270)
                      +|+++  |+||++||..+..+.++.. .|++||+|+++|+++|+.|+++ +||+|++|+||+++|+|...+....     
T Consensus       160 ~m~~~--g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~  237 (329)
T 3lt0_A          160 IMKPQ--SSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYEN  237 (329)
T ss_dssp             GEEEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC--------
T ss_pred             HHhhC--CeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhhhhcccccc
Confidence            99775  8999999999999999985 9999999999999999999998 8999999999999999877653210     


Q ss_pred             --------------------------------------hhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEEe
Q 024230          216 --------------------------------------KFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVC  257 (270)
Q Consensus       216 --------------------------------------~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~  257 (270)
                                                            ...+......|.+++.+|+|+|++++||+|+.++++||++|.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~fL~s~~a~~itG~~i~  317 (329)
T 3lt0_A          238 NTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITGQTIY  317 (329)
T ss_dssp             ----------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             cccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcccCcCCHHHHHHHHHHHhCchhccccCcEEE
Confidence                                                  013445667899999999999999999999999999999999


Q ss_pred             ecCCccccc
Q 024230          258 IDGGFTVNG  266 (270)
Q Consensus       258 vdgG~~~~~  266 (270)
                      +|||+++..
T Consensus       318 vdGG~~~~~  326 (329)
T 3lt0_A          318 VDNGLNIMF  326 (329)
T ss_dssp             ESTTGGGCS
T ss_pred             EcCCeeEEe
Confidence            999999864

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=1.3e-44  Score=306.66  Aligned_cols=243  Identities=27%  Similarity=0.397  Sum_probs=210.5

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .|++++|+++||||++|||++++++|+++|++|++++|+++.+++..+++   +.++.++.+|++|+++++++++++.+.
T Consensus         7 ~~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (265)
T 2o23_A            7 CRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL---GNNCVFAPADVTSEKDVQTALALAKGK   83 (265)
T ss_dssp             -CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999999988877766655   457899999999999999999999998


Q ss_pred             cCCcccEEEECCCCCCCCCCC------CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc------CCcEEEEecCccccc
Q 024230           95 FNGKLNIFVNNVGTSVLKPTL------EYNAEDFSLVMSTNFESAFHLCQLAHPLLRAS------GAASIVLMSSALGIV  162 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~------~~g~ii~iss~~~~~  162 (270)
                      + +++|+||||||.....++.      +.+.++|++.+++|+.+++.+++++.|+|.++      +.++||++||..+..
T Consensus        84 ~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~  162 (265)
T 2o23_A           84 F-GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE  162 (265)
T ss_dssp             H-SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH
T ss_pred             C-CCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcC
Confidence            8 7999999999987655544      37899999999999999999999999999887      678999999999999


Q ss_pred             cCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCC-CCCCChHhHHHHHH
Q 024230          163 SANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPM-GRLGEPKEVSSLVA  241 (270)
Q Consensus       163 ~~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~  241 (270)
                      +.++...|++||++++.|+++++.|++++||+|++|+||+++|++.....  ......+....|. +++.+|+|+++.++
T Consensus       163 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~  240 (265)
T 2o23_A          163 GQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLP--EKVCNFLASQVPFPSRLGDPAEYAHLVQ  240 (265)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC------------CHHHHTCSSSCSCBCHHHHHHHHH
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccC--HHHHHHHHHcCCCcCCCCCHHHHHHHHH
Confidence            98999999999999999999999999999999999999999999876532  1222233445666 78899999999999


Q ss_pred             HHhCCCCCCccCcEEeecCCcccc
Q 024230          242 FLCMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       242 ~l~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                      ||++  +++++|+++.+|||+++.
T Consensus       241 ~l~~--~~~~~G~~i~vdgG~~~~  262 (265)
T 2o23_A          241 AIIE--NPFLNGEVIRLDGAIRMQ  262 (265)
T ss_dssp             HHHH--CTTCCSCEEEESTTCCCC
T ss_pred             HHhh--cCccCceEEEECCCEecC
Confidence            9995  578999999999998764

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=5.1e-44  Score=304.96  Aligned_cols=253  Identities=28%  Similarity=0.418  Sum_probs=221.0

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++.. ..++.++.+|++|+++++++++++.+.
T Consensus        11 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   89 (278)
T 2bgk_A           11 TNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS-PDVISFVHCDVTKDEDVRNLVDTTIAK   89 (278)
T ss_dssp             CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCC-CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999998887776666632 237889999999999999999999998


Q ss_pred             cCCcccEEEECCCCCC--CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCC-CChhhh
Q 024230           95 FNGKLNIFVNNVGTSV--LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSAN-VGTVYS  171 (270)
Q Consensus        95 ~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~-~~~~y~  171 (270)
                      + +++|++|||||...  ..++.+.+.++|++.+++|+.+++.++++++|+|.+++.++||++||..++.+.+ ....|+
T Consensus        90 ~-~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~  168 (278)
T 2bgk_A           90 H-GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYT  168 (278)
T ss_dssp             H-SCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHH
T ss_pred             c-CCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCCCCcchH
Confidence            8 79999999999864  3577889999999999999999999999999999988889999999999998877 788999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC-hhhHHHHhhc--CCCCCCCChHhHHHHHHHHhCCCC
Q 024230          172 ATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN-GKFVDEVKSR--TPMGRLGEPKEVSSLVAFLCMPAA  248 (270)
Q Consensus       172 ~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~dva~~~~~l~s~~~  248 (270)
                      +||++++.++++++.|++++||+++.|+||++.|++....... ......+...  .+.+++.+|+|++++++|++++..
T Consensus       169 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  248 (278)
T 2bgk_A          169 ATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDES  248 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccccccccCCHHHHHHHHHHHcCccc
Confidence            9999999999999999999999999999999999987665332 2223333222  345778999999999999999888


Q ss_pred             CCccCcEEeecCCcccccccc
Q 024230          249 SYITGQTVCIDGGFTVNGFFF  269 (270)
Q Consensus       249 ~~~~G~~i~vdgG~~~~~~~~  269 (270)
                      .+++|+++.+|||+.+...+|
T Consensus       249 ~~~~G~~~~v~gg~~~~~~e~  269 (278)
T 2bgk_A          249 KYVSGLNLVIDGGYTRTNPAF  269 (278)
T ss_dssp             TTCCSCEEEESTTGGGCCTHH
T ss_pred             ccCCCCEEEECCcccccCCcc
Confidence            899999999999998876543

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=4.5e-46  Score=312.45  Aligned_cols=232  Identities=26%  Similarity=0.355  Sum_probs=206.2

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHH-CCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSM-LGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~-~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      .++|++|||||++|||+++|++|++ .|++|++++|+++.          ...++.++.+|++|+++++++++.+.  + 
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~----------~~~~~~~~~~Dv~~~~~v~~~~~~~~--~-   68 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF----------SAENLKFIKADLTKQQDITNVLDIIK--N-   68 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC----------CCTTEEEEECCTTCHHHHHHHHHHTT--T-
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc----------ccccceEEecCcCCHHHHHHHHHHHH--h-
Confidence            4689999999999999999999999 78999999987652          12357889999999999999996554  4 


Q ss_pred             CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHH
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGA  176 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaa  176 (270)
                      +++|++|||||.....++.+.+.++|++++++|+.+++.++++++|+|+++  |+||++||..+..+.++...|++||++
T Consensus        69 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--g~iv~~sS~~~~~~~~~~~~Y~asKaa  146 (244)
T 4e4y_A           69 VSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVG--ASIVFNGSDQCFIAKPNSFAYTLSKGA  146 (244)
T ss_dssp             CCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEE--EEEEEECCGGGTCCCTTBHHHHHHHHH
T ss_pred             CCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccC--cEEEEECCHHHccCCCCCchhHHHHHH
Confidence            799999999999888899999999999999999999999999999999664  799999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC---------hhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCC
Q 024230          177 MNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN---------GKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA  247 (270)
Q Consensus       177 l~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (270)
                      +++|+++++.|++++||+|++|+||+++|++.......         ...........|.+++.+|+|+|++++||+++.
T Consensus       147 ~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~  226 (244)
T 4e4y_A          147 IAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLSDK  226 (244)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhcCc
Confidence            99999999999999999999999999999987554211         113445566788999999999999999999999


Q ss_pred             CCCccCcEEeecCCccc
Q 024230          248 ASYITGQTVCIDGGFTV  264 (270)
Q Consensus       248 ~~~~~G~~i~vdgG~~~  264 (270)
                      ++++||+++.+|||+++
T Consensus       227 ~~~itG~~i~vdGG~~~  243 (244)
T 4e4y_A          227 SKFMTGGLIPIDGGYTA  243 (244)
T ss_dssp             GTTCCSCEEEESTTGGG
T ss_pred             cccccCCeEeECCCccC
Confidence            99999999999999875

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=3.7e-44  Score=309.58  Aligned_cols=251  Identities=28%  Similarity=0.410  Sum_probs=221.7

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhc-CCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK-GLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      ..++++||+++||||++|||+++|++|+++|++|++++|+++.+++..+++... +.++.++.+|++|.++++++++++.
T Consensus        20 ~~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   99 (302)
T 1w6u_A           20 PPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELI   99 (302)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHH
Confidence            356789999999999999999999999999999999999999888888877665 6789999999999999999999999


Q ss_pred             HHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCcEEEEecCccccccCCCChhhh
Q 024230           93 SLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLR-ASGAASIVLMSSALGIVSANVGTVYS  171 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~-~~~~g~ii~iss~~~~~~~~~~~~y~  171 (270)
                      +.+ +++|++|||||.....++.+.+.++|++.+++|+.+++.+++++.|+|. +++.++||++||..+..+.+....|+
T Consensus       100 ~~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  178 (302)
T 1w6u_A          100 KVA-GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSA  178 (302)
T ss_dssp             HHT-CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHH
T ss_pred             HHc-CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCcchhH
Confidence            988 7999999999988777888899999999999999999999999999997 44568999999999999989999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEecCcccCC-CCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCC
Q 024230          172 ATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTP-FTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY  250 (270)
Q Consensus       172 ~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  250 (270)
                      +||++++.|+++++.|++++||+++.|+||+++|+ +.............+....|.+++.+|+|++++++|++++...+
T Consensus       179 ~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~~~~~~~  258 (302)
T 1w6u_A          179 SAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASW  258 (302)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCcCCCCCHHHHHHHHHHHcCCcccc
Confidence            99999999999999999999999999999999997 54443222222334556678888999999999999999988889


Q ss_pred             ccCcEEeecCCcccc
Q 024230          251 ITGQTVCIDGGFTVN  265 (270)
Q Consensus       251 ~~G~~i~vdgG~~~~  265 (270)
                      ++|+++.+|||+.+.
T Consensus       259 ~~G~~~~v~gg~~~~  273 (302)
T 1w6u_A          259 INGAVIKFDGGEEVL  273 (302)
T ss_dssp             CCSCEEEESTTHHHH
T ss_pred             cCCCEEEECCCeeec
Confidence            999999999998764

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=1.4e-45  Score=311.95  Aligned_cols=241  Identities=20%  Similarity=0.204  Sum_probs=212.0

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHH---CCCeEEEeeCChhHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSM---LGATVHTCSRTETELNECIHHLQMK--GLKVTGSVCDVSSRPQRQTLINT   90 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~---~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~   90 (270)
                      .+|++|++|||||++|||+++|++|++   +|++|++++|+++.+++..+++...  +.++.++.+|++|++++++++++
T Consensus         2 ~~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   81 (259)
T 1oaa_A            2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA   81 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHH
Confidence            468899999999999999999999999   8999999999999988888888664  56899999999999999999999


Q ss_pred             HHH--HcCCccc--EEEECCCCCCC--CCCCC-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCcEEEEecCcccc
Q 024230           91 VSS--LFNGKLN--IFVNNVGTSVL--KPTLE-YNAEDFSLVMSTNFESAFHLCQLAHPLLRAS--GAASIVLMSSALGI  161 (270)
Q Consensus        91 i~~--~~~~~id--~li~~ag~~~~--~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~--~~g~ii~iss~~~~  161 (270)
                      +.+  .+ +++|  +||||||....  .++.+ .+.++|++++++|+.+++.++++++|+|.++  +.|+||++||..++
T Consensus        82 ~~~~~~~-g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~  160 (259)
T 1oaa_A           82 VRELPRP-EGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCAL  160 (259)
T ss_dssp             HHHSCCC-TTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGT
T ss_pred             HHhcccc-ccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhc
Confidence            987  55 6888  99999998643  46777 7999999999999999999999999999876  56899999999999


Q ss_pred             ccCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC---ChhhHHHHhhcCCCCCCCChHhHHH
Q 024230          162 VSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG---NGKFVDEVKSRTPMGRLGEPKEVSS  238 (270)
Q Consensus       162 ~~~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~dva~  238 (270)
                      .+.++...|++||+++++|+++++.|+++  |+|++|+||+++|+|......   .+...+.+....|.++..+|+|+|+
T Consensus       161 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~  238 (259)
T 1oaa_A          161 QPYKGWGLYCAGKAARDMLYQVLAAEEPS--VRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQ  238 (259)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHH
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHhhCCC--ceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhhhcCCcCCHHHHHH
Confidence            99999999999999999999999999974  999999999999998654321   2233334444556788999999999


Q ss_pred             HHHHHhCCCCCCccCcEEeecC
Q 024230          239 LVAFLCMPAASYITGQTVCIDG  260 (270)
Q Consensus       239 ~~~~l~s~~~~~~~G~~i~vdg  260 (270)
                      .++||+++ .+++||+++.+||
T Consensus       239 ~v~~l~~~-~~~itG~~i~vdg  259 (259)
T 1oaa_A          239 KLLGLLQK-DTFQSGAHVDFYD  259 (259)
T ss_dssp             HHHHHHHH-CCSCTTEEEETTC
T ss_pred             HHHHHHhh-ccccCCcEEeccC
Confidence            99999986 7899999999986

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=3.7e-44  Score=298.94  Aligned_cols=233  Identities=20%  Similarity=0.231  Sum_probs=210.5

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHH-hcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQ-MKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      ++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++. ..+.++.++.+|++|+++++++++++.+.+ +
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g   79 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERF-G   79 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHH-S
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhc-C
Confidence            47999999999999999999999999999999999999988888876 457789999999999999999999999998 7


Q ss_pred             cccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHH
Q 024230           98 KLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAM  177 (270)
Q Consensus        98 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal  177 (270)
                      ++|++|||||.....++.+.+.++|++++++|+.+++.++++++|+|++ +.+++|+++|..+..+.+....|++||+++
T Consensus        80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~  158 (235)
T 3l77_A           80 DVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKR-TGGLALVTTSDVSARLIPYGGGYVSTKWAA  158 (235)
T ss_dssp             SCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEECCGGGSSCCTTCHHHHHHHHHH
T ss_pred             CCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCcEEEEecchhcccCCCcchHHHHHHHH
Confidence            9999999999988889999999999999999999999999999999954 458999999999999999999999999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEEe
Q 024230          178 NQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVC  257 (270)
Q Consensus       178 ~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~  257 (270)
                      ++|++++  ++...||+|++|+||+++|+|.........          ..+..+|+|+|++++||+++..++++|+++.
T Consensus       159 ~~~~~~l--~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~----------~~~~~~p~dva~~v~~l~~~~~~~~~~~~~~  226 (235)
T 3l77_A          159 RALVRTF--QIENPDVRFFELRPGAVDTYFGGSKPGKPK----------EKGYLKPDEIAEAVRCLLKLPKDVRVEELML  226 (235)
T ss_dssp             HHHHHHH--HHHCTTSEEEEEEECSBSSSTTTCCSCCCG----------GGTCBCHHHHHHHHHHHHTSCTTCCCCEEEE
T ss_pred             HHHHHHH--hhcCCCeEEEEEeCCccccccccccCCccc----------ccCCCCHHHHHHHHHHHHcCCCCCccceEEE
Confidence            9999999  445779999999999999999876543221          1256799999999999999999999999999


Q ss_pred             ecCCcccc
Q 024230          258 IDGGFTVN  265 (270)
Q Consensus       258 vdgG~~~~  265 (270)
                      .|+|+.-.
T Consensus       227 ~~~~~~~~  234 (235)
T 3l77_A          227 RSVYQRPE  234 (235)
T ss_dssp             CCTTSCCC
T ss_pred             eecccCCC
Confidence            99998644

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=1.5e-44  Score=307.90  Aligned_cols=239  Identities=20%  Similarity=0.223  Sum_probs=192.9

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      +.++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.+.
T Consensus        23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~   99 (272)
T 4dyv_A           23 MSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI---GDDALCVPTDVTDPDSVRALFTATVEK   99 (272)
T ss_dssp             -----CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---TSCCEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             hcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999999999888877766   357889999999999999999999999


Q ss_pred             cCCcccEEEECCCCCCC-CCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CcEEEEecCccccccCCCChhhh
Q 024230           95 FNGKLNIFVNNVGTSVL-KPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG--AASIVLMSSALGIVSANVGTVYS  171 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~--~g~ii~iss~~~~~~~~~~~~y~  171 (270)
                      + +++|+||||||.... .++.+.+.++|++.+++|+.+++.++++++|+|++++  .|+||++||..+..+.++...|+
T Consensus       100 ~-g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~  178 (272)
T 4dyv_A          100 F-GRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYT  178 (272)
T ss_dssp             H-SCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTCHHHH
T ss_pred             c-CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCchHHH
Confidence            9 899999999999654 6888999999999999999999999999999998875  68999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCc
Q 024230          172 ATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI  251 (270)
Q Consensus       172 ~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  251 (270)
                      +||+|+++|+++++.|++++||+|++|+||+++|+|...+....   .......+.+++.+|+|+|++++||++......
T Consensus       179 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~---~~~~~~~~~~~~~~pedvA~~v~fL~s~~~~~~  255 (272)
T 4dyv_A          179 ATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGV---PQADLSIKVEPVMDVAHVASAVVYMASLPLDAN  255 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC---------------------------CHHHHHHHHHHHHHSCTTSC
T ss_pred             HHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcccc---hhhhhcccccCCCCHHHHHHHHHHHhCCCCcCc
Confidence            99999999999999999999999999999999999887653221   122234566788899999999999999765555


Q ss_pred             cCcEEeecC
Q 024230          252 TGQTVCIDG  260 (270)
Q Consensus       252 ~G~~i~vdg  260 (270)
                      .++......
T Consensus       256 ~~~i~i~~~  264 (272)
T 4dyv_A          256 VQFMTIMAT  264 (272)
T ss_dssp             CCEEEEEEC
T ss_pred             cceEEEecc
Confidence            554443333

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=3.9e-45  Score=308.58  Aligned_cols=235  Identities=26%  Similarity=0.331  Sum_probs=207.6

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      |++|||||++|||+++|++|+++|++|++++|+++.++...+ +...+.++..+     |+++++++++++.+.+ +++|
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~~~~~~~-----d~~~v~~~~~~~~~~~-g~iD   74 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETYPQLKPM-----SEQEPAELIEAVTSAY-GQVD   74 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHCTTSEEC-----CCCSHHHHHHHHHHHH-SCCC
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcCCcEEEE-----CHHHHHHHHHHHHHHh-CCCC
Confidence            789999999999999999999999999999999888776655 65555555544     6677888999998888 7999


Q ss_pred             EEEECCCCC-CCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHHHH
Q 024230          101 IFVNNVGTS-VLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQ  179 (270)
Q Consensus       101 ~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal~~  179 (270)
                      +||||||.. ...++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.+....|++||+++++
T Consensus        75 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~  154 (254)
T 1zmt_A           75 VLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACT  154 (254)
T ss_dssp             EEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHH
T ss_pred             EEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCCchHHHHHHHHHHH
Confidence            999999997 6778889999999999999999999999999999988878999999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEecCcc---------cCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCC
Q 024230          180 LAKNLACEWAKDNIRTNSVAPWYI---------RTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY  250 (270)
Q Consensus       180 ~~~sla~el~~~~i~v~~v~pG~v---------~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  250 (270)
                      |+++++.|++++||+|++|+||++         +|++...   .+...+.+....|.++..+|+|+++.++||+++.+++
T Consensus       155 ~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~---~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~  231 (254)
T 1zmt_A          155 LANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKT---NPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDY  231 (254)
T ss_dssp             HHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTT---CHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTTSCGG
T ss_pred             HHHHHHHHhhhcCcEEEEEecCccccccccccCCCccccc---ChHHHHHHhccCCCCCCcCHHHHHHHHHHHhCcccCC
Confidence            999999999999999999999999         6655432   1233344455678889999999999999999999999


Q ss_pred             ccCcEEeecCCcccc
Q 024230          251 ITGQTVCIDGGFTVN  265 (270)
Q Consensus       251 ~~G~~i~vdgG~~~~  265 (270)
                      ++|+++.+|||+...
T Consensus       232 ~tG~~~~vdgG~~~~  246 (254)
T 1zmt_A          232 LTGQVFWLAGGFPMI  246 (254)
T ss_dssp             GTTCEEEESTTCCCC
T ss_pred             ccCCEEEECCCchhh
Confidence            999999999998754

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=2.7e-44  Score=301.19  Aligned_cols=241  Identities=28%  Similarity=0.431  Sum_probs=212.5

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      +|+++||+++||||++|||++++++|+++|++|++++|+++.++++.+++.    ...++.+|++|+++++++++    .
T Consensus         2 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~----~   73 (244)
T 3d3w_A            2 ELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----GIEPVCVDLGDWEATERALG----S   73 (244)
T ss_dssp             CCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHT----T
T ss_pred             ccccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC----CCCEEEEeCCCHHHHHHHHH----H
Confidence            467999999999999999999999999999999999999887776655432    24556999999999888876    3


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCccccccCCCChhhhhh
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                      + +++|++|||||.....++.+.+.++|++.+++|+.+++.+++++.|+|.+++ .++||++||..+..+.++...|++|
T Consensus        74 ~-~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  152 (244)
T 3d3w_A           74 V-GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCST  152 (244)
T ss_dssp             C-CCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             c-CCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCCchHHHH
Confidence            4 7899999999998777888899999999999999999999999999998876 6899999999999988889999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccC
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG  253 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  253 (270)
                      |++++.++++++.|++++||+++.|+||+++|++.......+.....+....|.+++.+|+|+++++++++++.+.+++|
T Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  232 (244)
T 3d3w_A          153 KGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTG  232 (244)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCccccCCCC
Confidence            99999999999999999999999999999999986543333334455556678889999999999999999987889999


Q ss_pred             cEEeecCCccc
Q 024230          254 QTVCIDGGFTV  264 (270)
Q Consensus       254 ~~i~vdgG~~~  264 (270)
                      +++.+|||+.+
T Consensus       233 ~~~~v~gG~~~  243 (244)
T 3d3w_A          233 STLPVEGGFWA  243 (244)
T ss_dssp             CEEEESTTGGG
T ss_pred             CEEEECCCccC
Confidence            99999999865

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=1.3e-44  Score=305.18  Aligned_cols=246  Identities=28%  Similarity=0.422  Sum_probs=220.9

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCC-hhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRT-ETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .++++|+++||||++|||++++++|+++|++|++++|+ ++.+++..+++...+.++.++.+|++|+++++++++++.+.
T Consensus         3 ~~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (258)
T 3afn_B            3 PDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAK   82 (258)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            36889999999999999999999999999999999999 78888888888777778999999999999999999999998


Q ss_pred             cCCcccEEEECCCC-CCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--C---cEEEEecCccccc-cCCCC
Q 024230           95 FNGKLNIFVNNVGT-SVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG--A---ASIVLMSSALGIV-SANVG  167 (270)
Q Consensus        95 ~~~~id~li~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~--~---g~ii~iss~~~~~-~~~~~  167 (270)
                      + +++|++|||||. ....++.+.+.++|++.+++|+.+++.++++++|+|.+++  .   ++||++||..+.. +.++.
T Consensus        83 ~-g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~  161 (258)
T 3afn_B           83 F-GGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGA  161 (258)
T ss_dssp             H-SSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTTC
T ss_pred             c-CCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCCc
Confidence            8 799999999998 6667788899999999999999999999999999997654  3   8999999999887 77888


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCC
Q 024230          168 TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA  247 (270)
Q Consensus       168 ~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (270)
                      ..|++||++++.++++++.|+++.||+++.|+||+++|++....  .+.....+....|.+++.+++|+++++++++++.
T Consensus       162 ~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  239 (258)
T 3afn_B          162 GLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADK--TQDVRDRISNGIPMGRFGTAEEMAPAFLFFASHL  239 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTC--CHHHHHHHHTTCTTCSCBCGGGTHHHHHHHHCHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccccc--CHHHHHHHhccCCCCcCCCHHHHHHHHHHHhCcc
Confidence            99999999999999999999999999999999999999987653  2344455556678888999999999999999876


Q ss_pred             CC-CccCcEEeecCCccc
Q 024230          248 AS-YITGQTVCIDGGFTV  264 (270)
Q Consensus       248 ~~-~~~G~~i~vdgG~~~  264 (270)
                      .. +++|+++.+|||+..
T Consensus       240 ~~~~~~G~~~~v~gg~~~  257 (258)
T 3afn_B          240 ASGYITGQVLDINGGQYK  257 (258)
T ss_dssp             HHTTCCSEEEEESTTSSC
T ss_pred             hhccccCCEEeECCCccC
Confidence            66 899999999999853

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=8.9e-44  Score=307.40  Aligned_cols=250  Identities=33%  Similarity=0.488  Sum_probs=220.1

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHh-----cCCeEEEEEccCCCHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQM-----KGLKVTGSVCDVSSRPQRQTLIN   89 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~   89 (270)
                      ...|++|+|+||||++|||+++|++|+++|++|++++|+.+.+++..+++..     .+.++.++.+|++++++++++++
T Consensus        13 ~~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   92 (303)
T 1yxm_A           13 PGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVK   92 (303)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHH
T ss_pred             cCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHH
Confidence            4578999999999999999999999999999999999999988888888876     46689999999999999999999


Q ss_pred             HHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChh
Q 024230           90 TVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTV  169 (270)
Q Consensus        90 ~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~  169 (270)
                      ++.+.+ +++|++|||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++.++||++||.. ..+.+....
T Consensus        93 ~~~~~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~~~~~  170 (303)
T 1yxm_A           93 STLDTF-GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFPLAVH  170 (303)
T ss_dssp             HHHHHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCTTCHH
T ss_pred             HHHHHc-CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCCCcchh
Confidence            999988 799999999998777788889999999999999999999999999976655568999999998 778888899


Q ss_pred             hhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCc-cccC-ChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCC
Q 024230          170 YSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTE-PLLG-NGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA  247 (270)
Q Consensus       170 y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (270)
                      |+++|+++++++++++.|+.+.||++++|+||++.|++.. .... .+.....+....|.+++.+|+|+|++++||+++.
T Consensus       171 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~~~~  250 (303)
T 1yxm_A          171 SGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPA  250 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHHSGG
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCcccCCCCHHHHHHHHHHHhCcc
Confidence            9999999999999999999999999999999999999531 1111 1222333444567788999999999999999988


Q ss_pred             CCCccCcEEeecCCccccc
Q 024230          248 ASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       248 ~~~~~G~~i~vdgG~~~~~  266 (270)
                      ..+++|+++.+|||+.+..
T Consensus       251 ~~~~~G~~~~v~gG~~~~~  269 (303)
T 1yxm_A          251 ASFITGQSVDVDGGRSLYT  269 (303)
T ss_dssp             GTTCCSCEEEESTTGGGCB
T ss_pred             cccCCCcEEEECCCeeccc
Confidence            8999999999999987654

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=2.3e-44  Score=300.48  Aligned_cols=225  Identities=20%  Similarity=0.213  Sum_probs=192.6

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      |.+|++|||||++|||+++|++|+++|++|++++|+++.+++..+++.   .++.++.+|++|+++++++++++.+.+ +
T Consensus         1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~~-g   76 (235)
T 3l6e_A            1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG---NAVIGIVADLAHHEDVDVAFAAAVEWG-G   76 (235)
T ss_dssp             --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG---GGEEEEECCTTSHHHHHHHHHHHHHHH-C
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc---CCceEEECCCCCHHHHHHHHHHHHHhc-C
Confidence            457999999999999999999999999999999999999888877773   368999999999999999999999998 7


Q ss_pred             cccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHH
Q 024230           98 KLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAM  177 (270)
Q Consensus        98 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal  177 (270)
                      ++|++|||||.....++.+.+.++|++++++|+.+++.++++++|+|++++ ++||++||..+..+.++...|++||+|+
T Consensus        77 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~asKaa~  155 (235)
T 3l6e_A           77 LPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQVGKANESLYCASKWGM  155 (235)
T ss_dssp             SCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECCSSCSSHHHHHHHHHHH
T ss_pred             CCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcCCCCCCcHHHHHHHHH
Confidence            999999999998888899999999999999999999999999999998765 5999999999999999999999999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhC-CCCCCccCcEE
Q 024230          178 NQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCM-PAASYITGQTV  256 (270)
Q Consensus       178 ~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s-~~~~~~~G~~i  256 (270)
                      ++|+++++.|++++||+|++|+||+++|+|......           .+..+..+|+|+|+.++|+++ +...+++|-.+
T Consensus       156 ~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-----------~~~~~~~~pedvA~~v~~l~~~~~~~~i~~i~~  224 (235)
T 3l6e_A          156 RGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH-----------VDPSGFMTPEDAAAYMLDALEARSSCHVTDLFI  224 (235)
T ss_dssp             HHHHHHHHHHTTTSSEEEEEEEEEEECCCC----------------------CBCHHHHHHHHHHHTCCCSSEEEEEEEE
T ss_pred             HHHHHHHHHHhhccCCEEEEEeCCCccCcchhccCC-----------CCCcCCCCHHHHHHHHHHHHhCCCCcceeeEEE
Confidence            999999999999999999999999999998755321           123467899999999999998 56777777665


Q ss_pred             ee
Q 024230          257 CI  258 (270)
Q Consensus       257 ~v  258 (270)
                      .-
T Consensus       225 ~~  226 (235)
T 3l6e_A          225 GR  226 (235)
T ss_dssp             EE
T ss_pred             ec
Confidence            43

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.2e-44  Score=310.00  Aligned_cols=239  Identities=23%  Similarity=0.280  Sum_probs=199.7

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCe-EEEEEccCCCHHHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLK-VTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .+++||++|||||++|||+++|++|+++|++|++++|+++.+++..+++...+.. +.++.+|++|+++++++++++.+.
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  108 (281)
T 4dry_A           29 GSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAE  108 (281)
T ss_dssp             -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999999998888888765444 589999999999999999999999


Q ss_pred             cCCcccEEEECCCCCCC-CCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CcEEEEecCccccccCCCChhhh
Q 024230           95 FNGKLNIFVNNVGTSVL-KPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG--AASIVLMSSALGIVSANVGTVYS  171 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~--~g~ii~iss~~~~~~~~~~~~y~  171 (270)
                      + +++|+||||||.... .++.+.+.++|++++++|+.+++.++++++|+|.+++  .|+||++||..+..+.++...|+
T Consensus       109 ~-g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~  187 (281)
T 4dry_A          109 F-ARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYT  187 (281)
T ss_dssp             H-SCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTCHHHH
T ss_pred             c-CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCChhHH
Confidence            8 899999999998654 7888999999999999999999999999999998875  68999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCC-CCC
Q 024230          172 ATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA-ASY  250 (270)
Q Consensus       172 ~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~-~~~  250 (270)
                      +||+|+++|+++++.|++++||+||+|+||+++|+|.........   +.....+.++..+|+|+|++++||++.. ...
T Consensus       188 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~---~~~~~~~~~~~~~pedvA~~v~fL~s~~~~~~  264 (281)
T 4dry_A          188 ATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGVL---QANGEVAAEPTIPIEHIAEAVVYMASLPLSAN  264 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CEEE---CTTSCEEECCCBCHHHHHHHHHHHHHSCTTEE
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcchhh---hhhhcccccCCCCHHHHHHHHHHHhCCCccCc
Confidence            999999999999999999999999999999999998866532111   1112334567889999999999999954 444


Q ss_pred             ccCcEEee
Q 024230          251 ITGQTVCI  258 (270)
Q Consensus       251 ~~G~~i~v  258 (270)
                      +++.++.-
T Consensus       265 i~~~~i~p  272 (281)
T 4dry_A          265 VLTMTVMA  272 (281)
T ss_dssp             EEEEEEEE
T ss_pred             cccEEEEe
Confidence            44444443

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=1.7e-44  Score=305.62  Aligned_cols=242  Identities=21%  Similarity=0.279  Sum_probs=203.2

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH-c
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL-F   95 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~-~   95 (270)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++.+++..++++..+.++.++.+|++|+++++++++++.+. +
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   81 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQ   81 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            478999999999999999999999999999999999999888888888777778999999999999999999999876 6


Q ss_pred             CCcccEEEECCCC--C-----CCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCCh
Q 024230           96 NGKLNIFVNNVGT--S-----VLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGT  168 (270)
Q Consensus        96 ~~~id~li~~ag~--~-----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~  168 (270)
                       +++|+||||||.  .     ...++.+.+.++|++++++|+.+++.+++.+.|+|.+++.|+||++||..+..+. ...
T Consensus        82 -g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~~~  159 (260)
T 2qq5_A           82 -GRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYM-FNV  159 (260)
T ss_dssp             -TCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCC-SSH
T ss_pred             -CCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCC-CCC
Confidence             899999999953  2     3467788899999999999999999999999999988878999999999887754 467


Q ss_pred             hhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhH-HH-Hh-hcCCCCCCCChHhHHHHHHHHhC
Q 024230          169 VYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFV-DE-VK-SRTPMGRLGEPKEVSSLVAFLCM  245 (270)
Q Consensus       169 ~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~-~~-~~-~~~~~~~~~~~~dva~~~~~l~s  245 (270)
                      .|++||+++++|+++++.|++++||+|++|+||+++|+|........... .. .. ...+.++..+|+|+|++++||++
T Consensus       160 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~v~~l~s  239 (260)
T 2qq5_A          160 PYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVVALAT  239 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC----------------------CHHHHHHHHHHHHHHHHT
T ss_pred             chHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhHHHHHHhhhccCCCHHHHHHHHHHHhc
Confidence            89999999999999999999999999999999999999876532211110 01 11 12345556789999999999999


Q ss_pred             CCC-CCccCcEEeecC
Q 024230          246 PAA-SYITGQTVCIDG  260 (270)
Q Consensus       246 ~~~-~~~~G~~i~vdg  260 (270)
                      +.+ .++||++|.+|+
T Consensus       240 ~~~~~~itG~~i~~~~  255 (260)
T 2qq5_A          240 DPNILSLSGKVLPSCD  255 (260)
T ss_dssp             CTTGGGGTTCEEEHHH
T ss_pred             Ccccccccceeechhh
Confidence            876 589999999874

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=4.4e-44  Score=324.80  Aligned_cols=245  Identities=26%  Similarity=0.323  Sum_probs=209.9

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      ..++||++|||||++|||+++|++|+++|++|++++|+... ++..+.+.+.+  +.++.+|++|.++++++++++.+.+
T Consensus       209 ~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~-~~l~~~~~~~~--~~~~~~Dvtd~~~v~~~~~~~~~~~  285 (454)
T 3u0b_A          209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDLKRVADKVG--GTALTLDVTADDAVDKITAHVTEHH  285 (454)
T ss_dssp             STTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH-HHHHHHHHHHT--CEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred             cCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHHHHHcC--CeEEEEecCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999999987542 22333333333  4578999999999999999999998


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKG  175 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKa  175 (270)
                      ++++|++|||||+....++.+.+.++|++++++|+.+++++.+++.|.|.+++.++||++||..+..+.+++..|++||+
T Consensus       286 g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~~~YaasKa  365 (454)
T 3u0b_A          286 GGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKA  365 (454)
T ss_dssp             TTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred             CCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCCHHHHHHHH
Confidence            44599999999999888999999999999999999999999999999998888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcE
Q 024230          176 AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT  255 (270)
Q Consensus       176 al~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  255 (270)
                      ++++|+++++.|++++||+||+|+||+++|+|........  .+......+.++..+|+|+++++.||+++.++++||++
T Consensus       366 al~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~--~~~~~~~~~l~r~g~pedvA~~v~fL~s~~a~~itG~~  443 (454)
T 3u0b_A          366 GMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLAT--REVGRRLNSLFQGGQPVDVAELIAYFASPASNAVTGNT  443 (454)
T ss_dssp             HHHHHHHHHHHHHHTTTCEEEEEEECSBCC------------CHHHHHSBTTSSCBCHHHHHHHHHHHHCGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhh--HHHHHhhccccCCCCHHHHHHHHHHHhCCccCCCCCcE
Confidence            9999999999999999999999999999999987653221  22233446778889999999999999999999999999


Q ss_pred             EeecCCcccc
Q 024230          256 VCIDGGFTVN  265 (270)
Q Consensus       256 i~vdgG~~~~  265 (270)
                      |.+|||..+.
T Consensus       444 i~vdGG~~lG  453 (454)
T 3u0b_A          444 IRVCGQAMLG  453 (454)
T ss_dssp             EEESSSBSCC
T ss_pred             EEECCccccc
Confidence            9999998764

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=6.3e-44  Score=300.35  Aligned_cols=235  Identities=31%  Similarity=0.436  Sum_probs=202.9

Q ss_pred             cccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           13 QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        13 ~~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      .+..+++||++|||||++|||+++|++|+++|++|++++|+++..++    +   + ++.++ +|+  .++++++++++ 
T Consensus        12 ~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~----~---~-~~~~~-~D~--~~~~~~~~~~~-   79 (249)
T 1o5i_A           12 HMELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR----S---G-HRYVV-CDL--RKDLDLLFEKV-   79 (249)
T ss_dssp             ----CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH----T---C-SEEEE-CCT--TTCHHHHHHHS-
T ss_pred             hHHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHh----h---C-CeEEE-eeH--HHHHHHHHHHh-
Confidence            33468999999999999999999999999999999999999743322    2   3 56667 999  45666666554 


Q ss_pred             HHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhh
Q 024230           93 SLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSA  172 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~  172 (270)
                          .++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||..++.+.++...|++
T Consensus        80 ----~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  155 (249)
T 1o5i_A           80 ----KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNS  155 (249)
T ss_dssp             ----CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             ----cCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCCCchHHH
Confidence                4899999999998778888999999999999999999999999999999888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHH-HHhhcCCCCCCCChHhHHHHHHHHhCCCCCCc
Q 024230          173 TKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVD-EVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI  251 (270)
Q Consensus       173 sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  251 (270)
                      ||+++++|+++++.|++++||+|++|+||+++|++.....  +.... .+....|.+++.+|+|+|++++||+++.++++
T Consensus       156 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~s~~~~~~  233 (249)
T 1o5i_A          156 ARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELL--SEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYL  233 (249)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHS--CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccc--hhhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCC
Confidence            9999999999999999999999999999999999865432  22223 45556788899999999999999999888999


Q ss_pred             cCcEEeecCCcccc
Q 024230          252 TGQTVCIDGGFTVN  265 (270)
Q Consensus       252 ~G~~i~vdgG~~~~  265 (270)
                      +|+++.+|||+...
T Consensus       234 tG~~~~vdgG~~~~  247 (249)
T 1o5i_A          234 TGQTIVVDGGLSKF  247 (249)
T ss_dssp             CSCEEEESTTCCCC
T ss_pred             CCCEEEECCCcccC
Confidence            99999999998764

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=1.3e-43  Score=296.92  Aligned_cols=241  Identities=29%  Similarity=0.462  Sum_probs=218.1

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEe-eCChhHHHHHHHHHHhcCCeEEE-EEccCCCHHHHHHHHHHHHHHcCC
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTC-SRTETELNECIHHLQMKGLKVTG-SVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~-~r~~~~~~~~~~~~~~~~~~~~~-~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      +|+++||||++|||++++++|+++|++|+++ +|+++..++..+++...+.++.. +.+|++|.++++++++++.+.+ +
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~   79 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVL-G   79 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHH-T
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhc-C
Confidence            5899999999999999999999999999998 89988888888888776667776 8999999999999999999988 7


Q ss_pred             cccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHH
Q 024230           98 KLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAM  177 (270)
Q Consensus        98 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal  177 (270)
                      ++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|+|++++.++||++||..+..+.+....|++||+++
T Consensus        80 ~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  159 (245)
T 2ph3_A           80 GLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGL  159 (245)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSSBHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCCCcchHHHHHHH
Confidence            99999999999877788889999999999999999999999999999988789999999999988888899999999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEEe
Q 024230          178 NQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVC  257 (270)
Q Consensus       178 ~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~  257 (270)
                      +.++++++.|+.+.||+++.|+||+++|++....  .+.....+....+.+++.+++|+++++++++++...+++|+++.
T Consensus       160 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~  237 (245)
T 2ph3_A          160 IGFTRAVAKEYAQRGITVNAVAPGFIETEMTERL--PQEVKEAYLKQIPAGRFGRPEEVAEAVAFLVSEKAGYITGQTLC  237 (245)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS--CHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEE
T ss_pred             HHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccccccCCEEE
Confidence            9999999999999999999999999999876543  23334445556677889999999999999999878899999999


Q ss_pred             ecCCcc
Q 024230          258 IDGGFT  263 (270)
Q Consensus       258 vdgG~~  263 (270)
                      +|||+.
T Consensus       238 v~gg~~  243 (245)
T 2ph3_A          238 VDGGLT  243 (245)
T ss_dssp             ESTTCS
T ss_pred             ECCCCC
Confidence            999975

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=1.5e-44  Score=299.17  Aligned_cols=220  Identities=23%  Similarity=0.334  Sum_probs=195.4

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      +|++++|++|||||++|||+++|++|+++|++|++++|+.+                    +|++|+++++++++++   
T Consensus         1 M~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------------~D~~~~~~v~~~~~~~---   57 (223)
T 3uce_A            1 MMGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------------LDISDEKSVYHYFETI---   57 (223)
T ss_dssp             ----CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------------CCTTCHHHHHHHHHHH---
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------------cCCCCHHHHHHHHHHh---
Confidence            46789999999999999999999999999999999998765                    7999999999988765   


Q ss_pred             cCCcccEEEECCCCC-CCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhh
Q 024230           95 FNGKLNIFVNNVGTS-VLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        95 ~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                        +++|++|||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|++  .|+||++||..+..+.++...|++|
T Consensus        58 --g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~Y~as  133 (223)
T 3uce_A           58 --GAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ--GGSITLTSGMLSRKVVANTYVKAAI  133 (223)
T ss_dssp             --CSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE--EEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             --CCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC--CeEEEEecchhhccCCCCchHHHHH
Confidence              7999999999987 6778899999999999999999999999999999965  4799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC--hhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCc
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN--GKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI  251 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  251 (270)
                      |+++++|+++++.|+++  |+|++|+||+++|++.......  ....+......|.+++.+|+|+|++++|+++  ++++
T Consensus       134 K~a~~~~~~~la~e~~~--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~--~~~~  209 (223)
T 3uce_A          134 NAAIEATTKVLAKELAP--IRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVGKVGEASDIAMAYLFAIQ--NSYM  209 (223)
T ss_dssp             HHHHHHHHHHHHHHHTT--SEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHH--CTTC
T ss_pred             HHHHHHHHHHHHHhhcC--cEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCCCCccCHHHHHHHHHHHcc--CCCC
Confidence            99999999999999987  9999999999999987665322  1233445667889999999999999999997  5889


Q ss_pred             cCcEEeecCCcccc
Q 024230          252 TGQTVCIDGGFTVN  265 (270)
Q Consensus       252 ~G~~i~vdgG~~~~  265 (270)
                      ||+++.+|||+.+.
T Consensus       210 tG~~i~vdgG~~~s  223 (223)
T 3uce_A          210 TGTVIDVDGGALLG  223 (223)
T ss_dssp             CSCEEEESTTGGGC
T ss_pred             CCcEEEecCCeecC
Confidence            99999999998763

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=8.3e-44  Score=303.35  Aligned_cols=241  Identities=22%  Similarity=0.301  Sum_probs=202.3

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      .+|+ |++|||||++|||+++|++|+++|++|++++|+++.+++..+++... .++.++.+|++|+++++++++++.+.+
T Consensus        18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~   95 (272)
T 2nwq_A           18 SHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK-TRVLPLTLDVRDRAAMSAAVDNLPEEF   95 (272)
T ss_dssp             ---C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT-SCEEEEECCTTCHHHHHHHHHTCCGGG
T ss_pred             CCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            3456 99999999999999999999999999999999999888887777543 578899999999999999999998888


Q ss_pred             CCcccEEEECCCCCCC-CCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc-EEEEecCccccccCCCChhhhhh
Q 024230           96 NGKLNIFVNNVGTSVL-KPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAA-SIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        96 ~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g-~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                       +++|+||||||.... .++.+.+.++|++++++|+.+++.++++++|+|++++.| +||++||..+..+.++...|++|
T Consensus        96 -g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~~~~Y~as  174 (272)
T 2nwq_A           96 -ATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGT  174 (272)
T ss_dssp             -SSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCCCchHHHH
Confidence             799999999998763 788899999999999999999999999999999888778 99999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC-ChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCcc
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG-NGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT  252 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  252 (270)
                      |+++++|+++++.|++++||+|++|+||+++|+|...... ........   .......+|+|+|+.++||+++ ..+++
T Consensus       175 Kaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~---~~~~~~~~pedvA~~v~~l~s~-~~~~~  250 (272)
T 2nwq_A          175 KAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQARYDKT---YAGAHPIQPEDIAETIFWIMNQ-PAHLN  250 (272)
T ss_dssp             HHHHHHHHHHHHTTCTTSCCEEEEEEECSBC-----------------------CCCCBCHHHHHHHHHHHHTS-CTTEE
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccchHHHHHh---hccCCCCCHHHHHHHHHHHhCC-CccCc
Confidence            9999999999999999999999999999999998653211 11111111   1112347899999999999986 57899


Q ss_pred             CcEEeecCCcc
Q 024230          253 GQTVCIDGGFT  263 (270)
Q Consensus       253 G~~i~vdgG~~  263 (270)
                      |+.+.+|+|..
T Consensus       251 g~~i~v~~~~~  261 (272)
T 2nwq_A          251 INSLEIMPVSQ  261 (272)
T ss_dssp             EEEEEEEETTE
T ss_pred             cceEEEeeccC
Confidence            99999999864

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-43  Score=301.33  Aligned_cols=247  Identities=25%  Similarity=0.393  Sum_probs=218.9

Q ss_pred             cccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeC-ChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Q 024230           13 QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSR-TETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTV   91 (270)
Q Consensus        13 ~~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i   91 (270)
                      ...+++++|++|||||++|||++++++|+++|++|++++| +++.+++..++++..+.++.++.+|++|+++++++++++
T Consensus        14 ~~~~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (274)
T 1ja9_A           14 DASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKA   93 (274)
T ss_dssp             --CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence            3457899999999999999999999999999999999999 777788888888777788999999999999999999999


Q ss_pred             HHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccc-ccCCCChhh
Q 024230           92 SSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGI-VSANVGTVY  170 (270)
Q Consensus        92 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~-~~~~~~~~y  170 (270)
                      .+.+ +++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|+|+ ++ ++||++||..++ .+.+....|
T Consensus        94 ~~~~-~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~-~~iv~~sS~~~~~~~~~~~~~Y  170 (274)
T 1ja9_A           94 VSHF-GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCR-RG-GRIILTSSIAAVMTGIPNHALY  170 (274)
T ss_dssp             HHHH-SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEE-EE-EEEEEECCGGGTCCSCCSCHHH
T ss_pred             HHHc-CCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-hC-CEEEEEcChHhccCCCCCCchH
Confidence            9988 7999999999998777888899999999999999999999999999997 33 899999999998 777888999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCcccc---------C-C-hhhHHHHhhcCCCCCCCChHhHHHH
Q 024230          171 SATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLL---------G-N-GKFVDEVKSRTPMGRLGEPKEVSSL  239 (270)
Q Consensus       171 ~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~---------~-~-~~~~~~~~~~~~~~~~~~~~dva~~  239 (270)
                      ++||++++.++++++.|+++.||+++.++||++.|++.....         . . +.....+....+.+++.+++|++++
T Consensus       171 ~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  250 (274)
T 1ja9_A          171 AGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRA  250 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCCCCccCHHHHHHH
Confidence            999999999999999999999999999999999998765210         0 1 2333344556778889999999999


Q ss_pred             HHHHhCCCCCCccCcEEeecCCc
Q 024230          240 VAFLCMPAASYITGQTVCIDGGF  262 (270)
Q Consensus       240 ~~~l~s~~~~~~~G~~i~vdgG~  262 (270)
                      +++++++...+++|+++.+|||+
T Consensus       251 i~~l~~~~~~~~~G~~~~v~gG~  273 (274)
T 1ja9_A          251 VSALCQEESEWINGQVIKLTGGG  273 (274)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHhCcccccccCcEEEecCCc
Confidence            99999988889999999999996

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=2.9e-43  Score=294.81  Aligned_cols=240  Identities=28%  Similarity=0.434  Sum_probs=211.7

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      +++++|+++||||+++||++++++|+++|++|++++|+++..++..+++    ..+.++.+|++|+++++++++    .+
T Consensus         3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~----~~   74 (244)
T 1cyd_A            3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC----PGIEPVCVDLGDWDATEKALG----GI   74 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHHT----TC
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----cCCCcEEecCCCHHHHHHHHH----Hc
Confidence            5689999999999999999999999999999999999988776655433    134556999999999988876    34


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCccccccCCCChhhhhhH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                       +++|++|||||.....++.+.+.++|++.+++|+.+++.+++++.|.|.+++ .++||++||..++.+.+....|++||
T Consensus        75 -~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  153 (244)
T 1cyd_A           75 -GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTK  153 (244)
T ss_dssp             -CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             -CCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCCcchhHHHH
Confidence             6899999999998777888899999999999999999999999999998876 68999999999999988899999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCc
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ  254 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  254 (270)
                      ++++.++++++.|+++.||+++.|+||++.|++.......+.....+....+.+++.+++|+++++++++++...+++|+
T Consensus       154 ~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  233 (244)
T 1cyd_A          154 GAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSGG  233 (244)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSS
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhcCCccCCCCHHHHHHHHHHHhCchhhcccCC
Confidence            99999999999999999999999999999998765433334444555566778889999999999999999888899999


Q ss_pred             EEeecCCccc
Q 024230          255 TVCIDGGFTV  264 (270)
Q Consensus       255 ~i~vdgG~~~  264 (270)
                      .+.+|||+.+
T Consensus       234 ~~~v~gG~~~  243 (244)
T 1cyd_A          234 GILVDAGYLA  243 (244)
T ss_dssp             EEEESTTGGG
T ss_pred             EEEECCCccC
Confidence            9999999875

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=4e-43  Score=295.28  Aligned_cols=235  Identities=21%  Similarity=0.290  Sum_probs=197.8

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      |+++||||++|||+++|++|+++|++|++++|+++.+++..+++.   .++.++.+|++|+++++++++++.+.+ +++|
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD   76 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG---DNLYIAQLDVRNRAAIEEMLASLPAEW-CNID   76 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---TTEEEEECCTTCHHHHHHHHHTSCTTT-CCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---CceEEEEcCCCCHHHHHHHHHHHHHhC-CCCC
Confidence            689999999999999999999999999999999988877766653   468899999999999999999988887 7999


Q ss_pred             EEEECCCCCC-CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHHHH
Q 024230          101 IFVNNVGTSV-LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQ  179 (270)
Q Consensus       101 ~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal~~  179 (270)
                      +||||||... ..++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.++...|++||+++++
T Consensus        77 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~  156 (248)
T 3asu_A           77 ILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQ  156 (248)
T ss_dssp             EEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred             EEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCCCchHHHHHHHHHH
Confidence            9999999863 567888999999999999999999999999999988878999999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEecCccc-CCCCccccC-ChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEEe
Q 024230          180 LAKNLACEWAKDNIRTNSVAPWYIR-TPFTEPLLG-NGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVC  257 (270)
Q Consensus       180 ~~~sla~el~~~~i~v~~v~pG~v~-t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~  257 (270)
                      |+++++.|++++||+|++|+||+++ |+|...... ........   .......+|+|+++.++||+++ ..+++|+.+.
T Consensus       157 ~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~~~~---~~~~~~~~p~dvA~~v~~l~s~-~~~~~g~~i~  232 (248)
T 3asu_A          157 FSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKT---YQNTVALTPEDVSEAVWWVSTL-PAHVNINTLE  232 (248)
T ss_dssp             HHHHHHHHTTTSCCEEEEEEECSBCC-------------------------CCBCHHHHHHHHHHHHHS-CTTCCCCEEE
T ss_pred             HHHHHHHHhhhcCcEEEEEeccccccCcchhhcccCchHHHHHH---HhccCCCCHHHHHHHHHHHhcC-CccceeeEEE
Confidence            9999999999999999999999999 998643211 11111111   1112346899999999999996 5789999999


Q ss_pred             ecCCcc
Q 024230          258 IDGGFT  263 (270)
Q Consensus       258 vdgG~~  263 (270)
                      ++++..
T Consensus       233 v~~~~~  238 (248)
T 3asu_A          233 MMPVTQ  238 (248)
T ss_dssp             ECCTTC
T ss_pred             Eccccc
Confidence            998854

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=2.2e-44  Score=313.67  Aligned_cols=248  Identities=21%  Similarity=0.272  Sum_probs=169.8

Q ss_pred             CCCCCCEEEEecC--CCcHHHHHHHHHHHCCCeEEEeeCCh-----------hHHH-----------HHHHHHHhcCCe-
Q 024230           16 WSLQGMTALVTGG--TKGLGLAVVEELSMLGATVHTCSRTE-----------TELN-----------ECIHHLQMKGLK-   70 (270)
Q Consensus        16 ~~l~gk~vlItG~--s~giG~~la~~l~~~G~~v~l~~r~~-----------~~~~-----------~~~~~~~~~~~~-   70 (270)
                      |+|+||++|||||  ++|||+++|++|+++|++|++++|++           +.++           +..+++...+.. 
T Consensus         5 ~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (319)
T 2ptg_A            5 VDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDL   84 (319)
T ss_dssp             CCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccc
Confidence            5689999999999  89999999999999999999998753           1111           122333322211 


Q ss_pred             --EEEEEcc--CCC------------------HHHHHHHHHHHHHHcCCcccEEEECCCCCC--CCCCCCCCHHHHHHHH
Q 024230           71 --VTGSVCD--VSS------------------RPQRQTLINTVSSLFNGKLNIFVNNVGTSV--LKPTLEYNAEDFSLVM  126 (270)
Q Consensus        71 --~~~~~~D--~~~------------------~~~~~~~~~~i~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~  126 (270)
                        ..++.+|  +++                  +++++++++++.+.+ +++|+||||||...  ..++.+.+.++|++++
T Consensus        85 ~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~-g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~  163 (319)
T 2ptg_A           85 VFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADV-GQIDILVHSLANGPEVTKPLLQTSRKGYLAAV  163 (319)
T ss_dssp             CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHH-SCEEEEEEEEECCSSSSSCGGGCCHHHHHHHH
T ss_pred             cccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHc-CCCCEEEECCccCCCCCCccccCCHHHHHHHH
Confidence              2333333  333                  447899999999988 79999999999763  5678899999999999


Q ss_pred             HHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCC-hhhhhhHHHHHHHHHHHHHHHcc-CCceEEEEecCccc
Q 024230          127 STNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAK-DNIRTNSVAPWYIR  204 (270)
Q Consensus       127 ~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~-~~y~~sKaal~~~~~sla~el~~-~~i~v~~v~pG~v~  204 (270)
                      ++|+.+++.++++++|+|++  .|+||++||..+..+.++. ..|++||+|+++|+++++.|+++ +||+||+|+||+++
T Consensus       164 ~vN~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~  241 (319)
T 2ptg_A          164 SSSSYSFVSLLQHFLPLMKE--GGSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLK  241 (319)
T ss_dssp             HHHTHHHHHHHHHHGGGEEE--EEEEEEEEECC------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC
T ss_pred             hHhhHHHHHHHHHHHHHHhc--CceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCcc
Confidence            99999999999999999965  3899999999999888887 68999999999999999999986 89999999999999


Q ss_pred             CCCCccccCC--hhh----HHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCccccc
Q 024230          205 TPFTEPLLGN--GKF----VDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       205 t~~~~~~~~~--~~~----~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                      |+|...+...  ..+    .+.+....|.+++.+|+|+++.++||+++.++++||++|.+|||+++.+
T Consensus       242 T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~~~  309 (319)
T 2ptg_A          242 SRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGLHAMG  309 (319)
T ss_dssp             -------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCTTC-
T ss_pred             ChhhhhcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCceeec
Confidence            9987654211  111    1122334678899999999999999999999999999999999998754

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=2e-42  Score=289.83  Aligned_cols=234  Identities=19%  Similarity=0.275  Sum_probs=215.0

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC-------eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGA-------TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTV   91 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~-------~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i   91 (270)
                      ++|++|||||++|||++++++|+++|+       +|++++|+++.++++.+++...+.++.++.+|++++++++++++++
T Consensus         1 ~~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (244)
T 2bd0_A            1 MKHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHI   80 (244)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHH
Confidence            378999999999999999999999999       9999999999888888888777778999999999999999999999


Q ss_pred             HHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhh
Q 024230           92 SSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYS  171 (270)
Q Consensus        92 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~  171 (270)
                      .+.+ +++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|+|++++.++||++||..++.+.++...|+
T Consensus        81 ~~~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  159 (244)
T 2bd0_A           81 VERY-GHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYC  159 (244)
T ss_dssp             HHHT-SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHH
T ss_pred             HHhC-CCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCCCchhH
Confidence            9998 799999999999887888889999999999999999999999999999888789999999999999989999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCc
Q 024230          172 ATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI  251 (270)
Q Consensus       172 ~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  251 (270)
                      +||+++++|+++++.|+.++||+++.|+||+++|++........           ..+..+|+|+++.+++++++...++
T Consensus       160 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-----------~~~~~~~~dva~~~~~l~~~~~~~~  228 (244)
T 2bd0_A          160 MSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEM-----------QALMMMPEDIAAPVVQAYLQPSRTV  228 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCSTT-----------GGGSBCHHHHHHHHHHHHTSCTTEE
T ss_pred             HHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccccc-----------cccCCCHHHHHHHHHHHHhCCcccc
Confidence            99999999999999999999999999999999999876542111           1257799999999999999999999


Q ss_pred             cCcEEeecCCccc
Q 024230          252 TGQTVCIDGGFTV  264 (270)
Q Consensus       252 ~G~~i~vdgG~~~  264 (270)
                      +|+++..++|...
T Consensus       229 ~g~~~~~~~~~~~  241 (244)
T 2bd0_A          229 VEEIILRPTSGDI  241 (244)
T ss_dssp             EEEEEEEETTCCC
T ss_pred             chheEEecccccc
Confidence            9999999998765

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=3.6e-43  Score=302.98  Aligned_cols=247  Identities=23%  Similarity=0.261  Sum_probs=202.8

Q ss_pred             cCCCCCCEEEEecCC--CcHHHHHHHHHHHCCCeEEEeeCChhHH-----------HHHHHHHHhcCC---eEEEEEcc-
Q 024230           15 RWSLQGMTALVTGGT--KGLGLAVVEELSMLGATVHTCSRTETEL-----------NECIHHLQMKGL---KVTGSVCD-   77 (270)
Q Consensus        15 ~~~l~gk~vlItG~s--~giG~~la~~l~~~G~~v~l~~r~~~~~-----------~~~~~~~~~~~~---~~~~~~~D-   77 (270)
                      .|+|+||++|||||+  +|||+++|++|+++|++|++++|++...           ++. +++.. +.   ....+.+| 
T Consensus         3 ~~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~   80 (297)
T 1d7o_A            3 PIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS-RVLPD-GSLMEIKKVYPLDA   80 (297)
T ss_dssp             CCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG-GBCTT-SSBCCEEEEEEECT
T ss_pred             ccccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh-hhhcc-ccccccccccccce
Confidence            467899999999999  9999999999999999999998764211           111 11111 11   12333443 


Q ss_pred             -------CC------------CHHHHHHHHHHHHHHcCCcccEEEECCCCCC--CCCCCCCCHHHHHHHHHHhhHHHHHH
Q 024230           78 -------VS------------SRPQRQTLINTVSSLFNGKLNIFVNNVGTSV--LKPTLEYNAEDFSLVMSTNFESAFHL  136 (270)
Q Consensus        78 -------~~------------~~~~~~~~~~~i~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l  136 (270)
                             ++            ++++++++++++.+.+ +++|+||||||...  ..++.+.+.++|++++++|+.+++.+
T Consensus        81 ~~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l  159 (297)
T 1d7o_A           81 VFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDF-GSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSL  159 (297)
T ss_dssp             TCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHH-SCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHH
T ss_pred             eccchhhhhhhhhccccccccCHHHHHHHHHHHHHHc-CCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHH
Confidence                   32            2568999999999888 79999999999754  56778899999999999999999999


Q ss_pred             HHHHHHHHHhcCCcEEEEecCccccccCCCC-hhhhhhHHHHHHHHHHHHHHHcc-CCceEEEEecCcccCCCCccccCC
Q 024230          137 CQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAK-DNIRTNSVAPWYIRTPFTEPLLGN  214 (270)
Q Consensus       137 ~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~-~~y~~sKaal~~~~~sla~el~~-~~i~v~~v~pG~v~t~~~~~~~~~  214 (270)
                      +++++|+|++  .|+||++||..+..+.++. ..|++||+|+++|+++++.|+++ +||+|++|+||+++|+|.......
T Consensus       160 ~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~~  237 (297)
T 1d7o_A          160 LSHFLPIMNP--GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFI  237 (297)
T ss_dssp             HHHHGGGEEE--EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHH
T ss_pred             HHHHHHHhcc--CceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhcccc
Confidence            9999999965  3899999999999988887 68999999999999999999985 899999999999999997653211


Q ss_pred             hhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCccccc
Q 024230          215 GKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                      +.....+....|.++..+|+|+++.++||+++.+++++|+++.+|||+.+.+
T Consensus       238 ~~~~~~~~~~~p~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~~~~~  289 (297)
T 1d7o_A          238 DTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSMG  289 (297)
T ss_dssp             HHHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGCS
T ss_pred             HHHHHHhhccCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCceeec
Confidence            2333344455788899999999999999999989999999999999988654

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=3.9e-43  Score=328.63  Aligned_cols=231  Identities=26%  Similarity=0.373  Sum_probs=201.4

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      ++|+||+++||||++|||+++|+.|+++|++|++++++.  .++..+++...+.++..+.+|++  ++.+++++++.+.+
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~~g~~~~~~~~Dv~--~~~~~~~~~~~~~~  393 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAAGGEAWPDQHDVA--KDSEAIIKNVIDKY  393 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHHTTCEEEEECCCHH--HHHHHHHHHHHHHH
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHhcCCeEEEEEcChH--HHHHHHHHHHHHhc
Confidence            578999999999999999999999999999999998743  34556667666778888888884  45677888888888


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKG  175 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKa  175 (270)
                       +++|+||||||+....++.+.+.++|++++++|+.|++.++++++|+|++++.|+||++||..+..+.+++..|++||+
T Consensus       394 -G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~asKa  472 (604)
T 2et6_A          394 -GTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKA  472 (604)
T ss_dssp             -SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTBHHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCChhHHHHHH
Confidence             8999999999998888899999999999999999999999999999999888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcE
Q 024230          176 AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT  255 (270)
Q Consensus       176 al~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  255 (270)
                      |+.+|+++|+.|++++||+||+|+||+ .|+|.......     +      .....+|+|+++.++||+|+.++ +||++
T Consensus       473 al~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~~~~-----~------~~~~~~pe~vA~~v~~L~s~~~~-itG~~  539 (604)
T 2et6_A          473 GILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSIMRE-----Q------DKNLYHADQVAPLLVYLGTDDVP-VTGET  539 (604)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC--------------------CCSSCGGGTHHHHHHTTSTTCC-CCSCE
T ss_pred             HHHHHHHHHHHHhCccCeEEEEEcCCC-CCccccccCch-----h------hccCCCHHHHHHHHHHHhCCccC-CCCcE
Confidence            999999999999999999999999996 99987543211     0      12346899999999999999888 99999


Q ss_pred             EeecCCccc
Q 024230          256 VCIDGGFTV  264 (270)
Q Consensus       256 i~vdgG~~~  264 (270)
                      +.+|||+..
T Consensus       540 ~~vdGG~~~  548 (604)
T 2et6_A          540 FEIGGGWIG  548 (604)
T ss_dssp             EEEETTEEE
T ss_pred             EEECCCeeE
Confidence            999999865

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=1.3e-43  Score=308.33  Aligned_cols=249  Identities=22%  Similarity=0.257  Sum_probs=201.3

Q ss_pred             cCCCCCCEEEEecC--CCcHHHHHHHHHHHCCCeEEEeeCChhH------HH-HHHHHHHhc--CCe---EEEEEcc---
Q 024230           15 RWSLQGMTALVTGG--TKGLGLAVVEELSMLGATVHTCSRTETE------LN-ECIHHLQMK--GLK---VTGSVCD---   77 (270)
Q Consensus        15 ~~~l~gk~vlItG~--s~giG~~la~~l~~~G~~v~l~~r~~~~------~~-~~~~~~~~~--~~~---~~~~~~D---   77 (270)
                      .|+|+||++|||||  ++|||+++|++|+++|++|++++|++..      .. ...+++.+.  +..   +.++.+|   
T Consensus         4 ~~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~   83 (315)
T 2o2s_A            4 PIDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAF   83 (315)
T ss_dssp             CCCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTC
T ss_pred             cccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccc
Confidence            35689999999999  8999999999999999999999986420      00 001111111  211   2333333   


Q ss_pred             ---------CC--------CHHHHHHHHHHHHHHcCCcccEEEECCCCCC--CCCCCCCCHHHHHHHHHHhhHHHHHHHH
Q 024230           78 ---------VS--------SRPQRQTLINTVSSLFNGKLNIFVNNVGTSV--LKPTLEYNAEDFSLVMSTNFESAFHLCQ  138 (270)
Q Consensus        78 ---------~~--------~~~~~~~~~~~i~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~  138 (270)
                               ++        |+++++++++++.+.+ +++|+||||||...  ..++.+.+.++|++++++|+.+++.+++
T Consensus        84 ~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~-g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  162 (315)
T 2o2s_A           84 DKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDL-GNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQ  162 (315)
T ss_dssp             SSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHH-CSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             cccchhhhhhhcccccccCCHHHHHHHHHHHHHhc-CCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHH
Confidence                     23        2568999999999988 79999999999763  5678889999999999999999999999


Q ss_pred             HHHHHHHhcCCcEEEEecCccccccCCCC-hhhhhhHHHHHHHHHHHHHHHcc-CCceEEEEecCcccCCCCccccCC--
Q 024230          139 LAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAK-DNIRTNSVAPWYIRTPFTEPLLGN--  214 (270)
Q Consensus       139 ~~~~~m~~~~~g~ii~iss~~~~~~~~~~-~~y~~sKaal~~~~~sla~el~~-~~i~v~~v~pG~v~t~~~~~~~~~--  214 (270)
                      +++|+|++  .|+||++||..+..+.++. ..|++||+|+++|+++++.|+++ +||+||+|+||+++|+|...+...  
T Consensus       163 ~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~  240 (315)
T 2o2s_A          163 HFGPIMNE--GGSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGE  240 (315)
T ss_dssp             HHSTTEEE--EEEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSSS
T ss_pred             HHHHHHhc--CCEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhcccccc
Confidence            99999965  3899999999999888887 58999999999999999999985 899999999999999986543211  


Q ss_pred             hhh----HHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCccccc
Q 024230          215 GKF----VDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       215 ~~~----~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                      ..+    .+.+....|.++..+|+|+++.++||+++.++++||++|.+|||+.+.+
T Consensus       241 ~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~~  296 (315)
T 2o2s_A          241 KSFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLHAMG  296 (315)
T ss_dssp             SCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGCS
T ss_pred             chhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCeeeec
Confidence            111    1223345788999999999999999999999999999999999997643

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=2.7e-43  Score=329.68  Aligned_cols=232  Identities=25%  Similarity=0.352  Sum_probs=204.3

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh---------hHHHHHHHHHHhcCCeEEEEEccCCCHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTE---------TELNECIHHLQMKGLKVTGSVCDVSSRPQRQT   86 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~---------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   86 (270)
                      ++++||+++||||++|||+++|+.|+++|++|++++|+.         +.+++..+++...+.++.   +|++|.+++++
T Consensus         4 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~---~d~~d~~~~~~   80 (604)
T 2et6_A            4 VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAV---ADYNNVLDGDK   80 (604)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEE---EECCCTTCHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEE---EEcCCHHHHHH
Confidence            568999999999999999999999999999999998765         567777788877666543   58888888899


Q ss_pred             HHHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCC
Q 024230           87 LINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANV  166 (270)
Q Consensus        87 ~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~  166 (270)
                      +++++.+.+ +++|+||||||+....++.+.+.++|++++++|+.|++.++++++|+|++++.|+||++||..+..+.++
T Consensus        81 ~v~~~~~~~-G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~~  159 (604)
T 2et6_A           81 IVETAVKNF-GTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFG  159 (604)
T ss_dssp             HHHHHHHHH-SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT
T ss_pred             HHHHHHHHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCC
Confidence            999999998 8999999999998888899999999999999999999999999999999888899999999999999999


Q ss_pred             ChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCC
Q 024230          167 GTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP  246 (270)
Q Consensus       167 ~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (270)
                      +..|++||+|+.+|+++|+.|++++||+||+|+|| +.|+|...... +    +..      +..+|+|++..++||+++
T Consensus       160 ~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~~~~~~-~----~~~------~~~~pe~vA~~v~~L~s~  227 (604)
T 2et6_A          160 QANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMTESIMP-P----PML------EKLGPEKVAPLVLYLSSA  227 (604)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHHHTTSC-H----HHH------TTCSHHHHHHHHHHHTSS
T ss_pred             chHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCccccccCC-h----hhh------ccCCHHHHHHHHHHHhCC
Confidence            99999999999999999999999999999999998 68877543321 1    111      135899999999999999


Q ss_pred             CCCCccCcEEeecCCccc
Q 024230          247 AASYITGQTVCIDGGFTV  264 (270)
Q Consensus       247 ~~~~~~G~~i~vdgG~~~  264 (270)
                      . .++||+++.+|||+..
T Consensus       228 ~-~~itG~~~~vdgG~~~  244 (604)
T 2et6_A          228 E-NELTGQFFEVAAGFYA  244 (604)
T ss_dssp             S-CCCCSCEEEEETTEEE
T ss_pred             c-ccCCCCEEEECCCeEE
Confidence            8 9999999999999753

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=1.6e-42  Score=299.62  Aligned_cols=231  Identities=23%  Similarity=0.315  Sum_probs=201.4

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      +.+++||++|||||++|||+++|++|+++|++|++++|+++.+++..+++...+.++.++.+|++|.++++++++++.+.
T Consensus        26 m~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  105 (301)
T 3tjr_A           26 LSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRL  105 (301)
T ss_dssp             CCCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             HhccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            44699999999999999999999999999999999999999999999999888889999999999999999999999999


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCccccccCCCChhhhhh
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                      + +++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..+..+.++...|++|
T Consensus       106 ~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  184 (301)
T 3tjr_A          106 L-GGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVA  184 (301)
T ss_dssp             H-SSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             C-CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCchHHHHH
Confidence            8 7999999999998888999999999999999999999999999999998876 7899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCCh--------hhHHHHhhcCCCCCCCChHhHHHHHHHHhC
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNG--------KFVDEVKSRTPMGRLGEPKEVSSLVAFLCM  245 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (270)
                      |+|+++|+++++.|+++.||+|++|+||+++|+|........        .....+..........+|+|+|+.++..+.
T Consensus       185 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~~l~  264 (301)
T 3tjr_A          185 KYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTADAIL  264 (301)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC----------------------CCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCCCCHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999865421100        000011111122356799999999999985


Q ss_pred             C
Q 024230          246 P  246 (270)
Q Consensus       246 ~  246 (270)
                      .
T Consensus       265 ~  265 (301)
T 3tjr_A          265 A  265 (301)
T ss_dssp             H
T ss_pred             c
Confidence            4

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=6.1e-42  Score=298.05  Aligned_cols=232  Identities=25%  Similarity=0.361  Sum_probs=204.9

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEee---------CChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCS---------RTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQT   86 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~---------r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   86 (270)
                      ++|+||++|||||++|||+++|++|+++|++|++++         |+.+..++..+++...+..+   .+|+++.+++++
T Consensus         5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~---~~D~~~~~~~~~   81 (319)
T 1gz6_A            5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKA---VANYDSVEAGEK   81 (319)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEE---EEECCCGGGHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeE---EEeCCCHHHHHH
Confidence            678999999999999999999999999999999964         56777778888887666543   489999999999


Q ss_pred             HHHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCC
Q 024230           87 LINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANV  166 (270)
Q Consensus        87 ~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~  166 (270)
                      +++++.+.+ +++|+||||||+....++.+.+.++|++.+++|+.+++.++++++|+|++++.++||++||..+..+.++
T Consensus        82 ~~~~~~~~~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~~  160 (319)
T 1gz6_A           82 LVKTALDTF-GRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFG  160 (319)
T ss_dssp             HHHHHHHHT-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT
T ss_pred             HHHHHHHHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCC
Confidence            999999988 7999999999998777888899999999999999999999999999999888899999999999888888


Q ss_pred             ChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCC
Q 024230          167 GTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP  246 (270)
Q Consensus       167 ~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (270)
                      ...|++||+++++|++++++|++++||+|++|+||++ |++...... .    ...      +..+|+|+++.++||+++
T Consensus       161 ~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~~~-~----~~~------~~~~p~dvA~~~~~l~s~  228 (319)
T 1gz6_A          161 QANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETVMP-E----DLV------EALKPEYVAPLVLWLCHE  228 (319)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGGSC-H----HHH------HHSCGGGTHHHHHHHTST
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccccCC-h----hhh------ccCCHHHHHHHHHHHhCc
Confidence            9999999999999999999999999999999999998 877654321 1    111      135899999999999987


Q ss_pred             CCCCccCcEEeecCCccc
Q 024230          247 AASYITGQTVCIDGGFTV  264 (270)
Q Consensus       247 ~~~~~~G~~i~vdgG~~~  264 (270)
                       ..+++|+++.+|||+..
T Consensus       229 -~~~~tG~~~~v~GG~~~  245 (319)
T 1gz6_A          229 -SCEENGGLFEVGAGWIG  245 (319)
T ss_dssp             -TCCCCSCEEEEETTEEE
T ss_pred             -hhhcCCCEEEECCCeEE
Confidence             45889999999999864

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=3.6e-42  Score=286.18  Aligned_cols=224  Identities=17%  Similarity=0.209  Sum_probs=188.7

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      |++|||||++|||+++|++|+++|++|++++|+++.+++..+++   +.++.++.+|+++.++++++++++.    ...|
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~----~~~d   74 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL---SNNVGYRARDLASHQEVEQLFEQLD----SIPS   74 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC---SSCCCEEECCTTCHHHHHHHHHSCS----SCCS
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH---hhccCeEeecCCCHHHHHHHHHHHh----hcCC
Confidence            68999999999999999999999999999999999887766655   5678899999999999999887653    2459


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHHHHH
Q 024230          101 IFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQL  180 (270)
Q Consensus       101 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal~~~  180 (270)
                      ++|||||.....++.+.+.++|++.+++|+.+++.++++++|+|.+++ ++||++||..+..+.++...|++||+|+++|
T Consensus        75 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~  153 (230)
T 3guy_A           75 TVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP-VNVVMIMSTAAQQPKAQESTYCAVKWAVKGL  153 (230)
T ss_dssp             EEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-CEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             EEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEeecccCCCCCCCchhHHHHHHHHHH
Confidence            999999998888899999999999999999999999999999998765 4999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhC-CCCCCccCcEEeec
Q 024230          181 AKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCM-PAASYITGQTVCID  259 (270)
Q Consensus       181 ~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s-~~~~~~~G~~i~vd  259 (270)
                      +++++.|++++||+|++|+||+++|++......          ..+.++..+|+|+++.++|+++ +...++||+++..+
T Consensus       154 ~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~----------~~~~~~~~~~~dvA~~i~~l~~~~~~~~itg~~~~~~  223 (230)
T 3guy_A          154 IESVRLELKGKPMKIIAVYPGGMATEFWETSGK----------SLDTSSFMSAEDAALMIHGALANIGNGYVSDITVNRE  223 (230)
T ss_dssp             HHHHHHHTTTSSCEEEEEEECCC--------------------------CCCHHHHHHHHHHHCCEETTEEEEEEEEEC-
T ss_pred             HHHHHHHHHhcCeEEEEEECCcccChHHHhcCC----------CCCcccCCCHHHHHHHHHHHHhCcCCCCccceeecCC
Confidence            999999999999999999999999998765421          2346678899999999999987 68899999999988


Q ss_pred             CCc
Q 024230          260 GGF  262 (270)
Q Consensus       260 gG~  262 (270)
                      ..-
T Consensus       224 ~~~  226 (230)
T 3guy_A          224 GHH  226 (230)
T ss_dssp             ---
T ss_pred             CCC
Confidence            653

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=5.1e-42  Score=291.41  Aligned_cols=241  Identities=22%  Similarity=0.321  Sum_probs=202.7

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK--GLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      ++||+++||||++|||++++++|+++|++|++++|+++..++..+++...  +.++.++.+|++|+++++++++++.+.+
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            68999999999999999999999999999999999998887777777543  4568899999999999999999999988


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC---CcEEEEecCccccccCCCChhhhh
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG---AASIVLMSSALGIVSANVGTVYSA  172 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~---~g~ii~iss~~~~~~~~~~~~y~~  172 (270)
                       +++|++|||||...        .++|++.+++|+.+++.+++.++|+|.+++   .|+||++||..++.+.++...|++
T Consensus        85 -g~id~lv~~Ag~~~--------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  155 (267)
T 2gdz_A           85 -GRLDILVNNAGVNN--------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCA  155 (267)
T ss_dssp             -SCCCEEEECCCCCC--------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             -CCCCEEEECCCCCC--------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchHHH
Confidence             79999999999752        356889999999999999999999997753   589999999999999899999999


Q ss_pred             hHHHHHHHHHHH--HHHHccCCceEEEEecCcccCCCCccccCChh------hHHHHhhcCCCCCCCChHhHHHHHHHHh
Q 024230          173 TKGAMNQLAKNL--ACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGK------FVDEVKSRTPMGRLGEPKEVSSLVAFLC  244 (270)
Q Consensus       173 sKaal~~~~~sl--a~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~dva~~~~~l~  244 (270)
                      ||+++++|++++  +.|+++.||+|++|+||+++|++.........      ..+.+....+..+..+|+|+|++++||+
T Consensus       156 sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~  235 (267)
T 2gdz_A          156 SKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLI  235 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHHHhccccCCCHHHHHHHHHHHh
Confidence            999999999995  68999999999999999999997654321110      1111111111234679999999999999


Q ss_pred             CCCCCCccCcEEeecCCcccccccc
Q 024230          245 MPAASYITGQTVCIDGGFTVNGFFF  269 (270)
Q Consensus       245 s~~~~~~~G~~i~vdgG~~~~~~~~  269 (270)
                      ++.  .++|+++.+|||......+|
T Consensus       236 s~~--~~~G~~~~v~gg~~~~~~~~  258 (267)
T 2gdz_A          236 EDD--ALNGAIMKITTSKGIHFQDY  258 (267)
T ss_dssp             HCT--TCSSCEEEEETTTEEEECCC
T ss_pred             cCc--CCCCcEEEecCCCcccccCc
Confidence            875  49999999999988766554

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=1.9e-41  Score=289.83  Aligned_cols=239  Identities=23%  Similarity=0.276  Sum_probs=202.6

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      |++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..++   .+.++.++.+|++|.++++++++++.+.+
T Consensus         1 M~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   77 (281)
T 3m1a_A            1 MSESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAA---YPDRAEAISLDVTDGERIDVVAADVLARY   77 (281)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHH---CTTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh---ccCCceEEEeeCCCHHHHHHHHHHHHHhC
Confidence            457899999999999999999999999999999999999887765543   35678999999999999999999999998


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKG  175 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKa  175 (270)
                       +++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|+|++++.++||++||..+..+.++...|++||+
T Consensus        78 -g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (281)
T 3m1a_A           78 -GRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKA  156 (281)
T ss_dssp             -SCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHH
T ss_pred             -CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCchHHHHHHH
Confidence             7999999999998888889999999999999999999999999999999888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC-----Chhh------HHHHhhcCCCCCCCChHhHHHHHHHHh
Q 024230          176 AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG-----NGKF------VDEVKSRTPMGRLGEPKEVSSLVAFLC  244 (270)
Q Consensus       176 al~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~-----~~~~------~~~~~~~~~~~~~~~~~dva~~~~~l~  244 (270)
                      ++++|+++++.|++++||+|++|+||+++|++......     ...+      ...+....+.++..+|+|+++++++++
T Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~  236 (281)
T 3m1a_A          157 ALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKAAAAIRLAL  236 (281)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHHHHHHHHHHHH
Confidence            99999999999999999999999999999998654211     1111      122334456778889999999999999


Q ss_pred             CCCCCCccCcEEeecCC
Q 024230          245 MPAASYITGQTVCIDGG  261 (270)
Q Consensus       245 s~~~~~~~G~~i~vdgG  261 (270)
                      ++..   .|..+.+.++
T Consensus       237 ~~~~---~~~~~~l~s~  250 (281)
T 3m1a_A          237 DTEK---TPLRLALGGD  250 (281)
T ss_dssp             HSSS---CCSEEEESHH
T ss_pred             hCCC---CCeEEecCch
Confidence            7652   4556665543

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=7.4e-43  Score=294.12  Aligned_cols=229  Identities=19%  Similarity=0.153  Sum_probs=201.3

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      .+..+|++|||||++|||+++|++|+++|++|++++|+++..+            ...+.+|++|.++++++++++.+.+
T Consensus        18 ~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~------------~~~~~~d~~d~~~v~~~~~~~~~~~   85 (251)
T 3orf_A           18 GSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA------------DHSFTIKDSGEEEIKSVIEKINSKS   85 (251)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS------------SEEEECSCSSHHHHHHHHHHHHTTT
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc------------ccceEEEeCCHHHHHHHHHHHHHHc
Confidence            4455899999999999999999999999999999999877532            1347899999999999999999988


Q ss_pred             CCcccEEEECCCCCCCCC-CCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           96 NGKLNIFVNNVGTSVLKP-TLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                       +++|++|||||.....+ +.+.+.++|++.+++|+.+++.++++++|+|++  .|+||++||..+..+.++...|++||
T Consensus        86 -g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~sK  162 (251)
T 3orf_A           86 -IKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ--GGLFVLTGASAALNRTSGMIAYGATK  162 (251)
T ss_dssp             -CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHH
T ss_pred             -CCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc--CCEEEEEechhhccCCCCCchhHHHH
Confidence             79999999999876655 678889999999999999999999999999965  47999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHc--cCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCC-CCCCc
Q 024230          175 GAMNQLAKNLACEWA--KDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP-AASYI  251 (270)
Q Consensus       175 aal~~~~~sla~el~--~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~-~~~~~  251 (270)
                      +|++.|+++++.|++  ++||+|++|+||+++|++...+.          ...+.++..+|+|+++.++||+++ .+.++
T Consensus       163 aa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~~----------~~~~~~~~~~~~dva~~i~~l~~~~~~~~~  232 (251)
T 3orf_A          163 AATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKYM----------SDANFDDWTPLSEVAEKLFEWSTNSDSRPT  232 (251)
T ss_dssp             HHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHHC----------TTSCGGGSBCHHHHHHHHHHHHHCGGGCCC
T ss_pred             HHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhhc----------ccccccccCCHHHHHHHHHHHhcCccccCC
Confidence            999999999999987  89999999999999998754432          223456778999999999999998 88999


Q ss_pred             cCcEEeecCCcccccccc
Q 024230          252 TGQTVCIDGGFTVNGFFF  269 (270)
Q Consensus       252 ~G~~i~vdgG~~~~~~~~  269 (270)
                      +|+++.+++|.....+.|
T Consensus       233 tG~~i~v~~g~~~~~~~~  250 (251)
T 3orf_A          233 NGSLVKFETKSKVTTWTN  250 (251)
T ss_dssp             TTCEEEEEEETTEEEEEE
T ss_pred             cceEEEEecCCccceecc
Confidence            999999999988776655

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=7.5e-41  Score=285.97  Aligned_cols=243  Identities=22%  Similarity=0.282  Sum_probs=207.2

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcC--CeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG--LKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      .++++|++|||||++|||++++++|+++|++|++++|+++.++++.+++...+  .++.++.+|++|+++++++++++.+
T Consensus        28 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  107 (279)
T 1xg5_A           28 ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRS  107 (279)
T ss_dssp             GGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999999998888888887654  5788999999999999999999999


Q ss_pred             HcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--cEEEEecCcccc--ccCCCChh
Q 024230           94 LFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGA--ASIVLMSSALGI--VSANVGTV  169 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~--g~ii~iss~~~~--~~~~~~~~  169 (270)
                      .+ +++|++|||||.....++.+.+.++|++.+++|+.+++.+++.++|.|++++.  ++||++||..+.  .+.+....
T Consensus       108 ~~-g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  186 (279)
T 1xg5_A          108 QH-SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHF  186 (279)
T ss_dssp             HH-CCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHH
T ss_pred             hC-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCCCCch
Confidence            88 79999999999988788889999999999999999999999999999988763  899999999988  56677789


Q ss_pred             hhhhHHHHHHHHHHHHHHHc--cCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCC
Q 024230          170 YSATKGAMNQLAKNLACEWA--KDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA  247 (270)
Q Consensus       170 y~~sKaal~~~~~sla~el~--~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (270)
                      |++||++++.|+++++.|+.  +.||+++.|+||+++|++........  ........+..+..+|+|+|+.++|++++.
T Consensus       187 Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~dvA~~i~~l~~~~  264 (279)
T 1xg5_A          187 YSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKD--PEKAAATYEQMKCLKPEDVAEAVIYVLSTP  264 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTC--HHHHHHHHC---CBCHHHHHHHHHHHHHSC
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccC--hhHHhhhcccccCCCHHHHHHHHHHHhcCC
Confidence            99999999999999999998  88999999999999999853322111  111122223456789999999999999988


Q ss_pred             CCCccCcEEeecCC
Q 024230          248 ASYITGQTVCIDGG  261 (270)
Q Consensus       248 ~~~~~G~~i~vdgG  261 (270)
                      ..+.+|++...++|
T Consensus       265 ~~~~~g~i~i~~~~  278 (279)
T 1xg5_A          265 AHIQIGDIQMRPTG  278 (279)
T ss_dssp             TTEEEEEEEEEETT
T ss_pred             cceEeeeEEEccCC
Confidence            88888865544443

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=5.1e-41  Score=279.67  Aligned_cols=229  Identities=25%  Similarity=0.293  Sum_probs=193.3

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      +.++|+++||||++|||++++++|+++|++|++++|+++.+++..+++.    ++.++.+|++|+++++++++++.+.+ 
T Consensus         2 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~-   76 (234)
T 2ehd_A            2 EGMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE----GALPLPGDVREEGDWARAVAAMEEAF-   76 (234)
T ss_dssp             --CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh----hceEEEecCCCHHHHHHHHHHHHHHc-
Confidence            4568999999999999999999999999999999999888776655442    57888999999999999999999988 


Q ss_pred             CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHH
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGA  176 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaa  176 (270)
                      +++|++|||||.....++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..++.+.++...|++||++
T Consensus        77 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  156 (234)
T 2ehd_A           77 GELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFG  156 (234)
T ss_dssp             SCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCCCchhhHHHHH
Confidence            79999999999987778888999999999999999999999999999998888999999999999988899999999999


Q ss_pred             HHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEE
Q 024230          177 MNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTV  256 (270)
Q Consensus       177 l~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i  256 (270)
                      ++.++++++.|++++||+++.|+||+++|++.....   .   .+       ...+|+|+|+.++|++++...+++|+++
T Consensus       157 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~---~~-------~~~~~~dvA~~~~~l~~~~~~~~~g~~~  223 (234)
T 2ehd_A          157 LLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNTP---G---QA-------WKLKPEDVAQAVLFALEMPGHAMVSEIE  223 (234)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEECC-----------------------------CCHHHHHHHHHHHHHSCCSSCCCEEE
T ss_pred             HHHHHHHHHHHHhhcCcEEEEEEeCCCcCCcccccc---c---cc-------CCCCHHHHHHHHHHHhCCCcccccceEE
Confidence            999999999999999999999999999999865321   0   01       1468999999999999999999999988


Q ss_pred             eecCCcc
Q 024230          257 CIDGGFT  263 (270)
Q Consensus       257 ~vdgG~~  263 (270)
                      ..++...
T Consensus       224 ~~~~~~~  230 (234)
T 2ehd_A          224 LRPTRPT  230 (234)
T ss_dssp             CCC----
T ss_pred             EeecCCC
Confidence            7665443

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=1.8e-42  Score=304.37  Aligned_cols=243  Identities=13%  Similarity=0.066  Sum_probs=206.8

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHH-CCCeEEEeeCChhHH------------HHHHHHHHhcCCeEEEEEccCCCHHH
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSM-LGATVHTCSRTETEL------------NECIHHLQMKGLKVTGSVCDVSSRPQ   83 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~-~G~~v~l~~r~~~~~------------~~~~~~~~~~~~~~~~~~~D~~~~~~   83 (270)
                      .-.+|++|||||++|||+++|+.|++ +|++|++++|+.+..            +.+.+.+...+.++..+.+|++++++
T Consensus        44 ~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~  123 (405)
T 3zu3_A           44 ANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEI  123 (405)
T ss_dssp             TTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHH
T ss_pred             CCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHH
Confidence            45789999999999999999999999 999999999876542            22344566667889999999999999


Q ss_pred             HHHHHHHHHHHcCCcccEEEECCCCC-------------CCCCC---------------------CCCCHHHHHHHHHHh
Q 024230           84 RQTLINTVSSLFNGKLNIFVNNVGTS-------------VLKPT---------------------LEYNAEDFSLVMSTN  129 (270)
Q Consensus        84 ~~~~~~~i~~~~~~~id~li~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~n  129 (270)
                      ++++++++.+.+ |++|+||||||..             ..+++                     .+.++++|++++++|
T Consensus       124 v~~~v~~i~~~~-G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn  202 (405)
T 3zu3_A          124 KQLTIDAIKQDL-GQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVM  202 (405)
T ss_dssp             HHHHHHHHHHHT-SCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHc-CCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhh
Confidence            999999999999 8999999999974             23455                     678999999999999


Q ss_pred             hHHHH-HHHHHHHHHHHhcCCcEEEEecCccccccCCCC--hhhhhhHHHHHHHHHHHHHHHccC-CceEEEEecCcccC
Q 024230          130 FESAF-HLCQLAHPLLRASGAASIVLMSSALGIVSANVG--TVYSATKGAMNQLAKNLACEWAKD-NIRTNSVAPWYIRT  205 (270)
Q Consensus       130 ~~~~~-~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~--~~y~~sKaal~~~~~sla~el~~~-~i~v~~v~pG~v~t  205 (270)
                      ..+.+ .+++++.+.+...++|+||++||..+..+.+.+  ..|++||+++++|+|+||.||+++ |||||+|+||++.|
T Consensus       203 ~~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T  282 (405)
T 3zu3_A          203 GGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVS  282 (405)
T ss_dssp             SSHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCC
T ss_pred             chhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcC
Confidence            99998 778887654333345899999999999998887  999999999999999999999999 99999999999999


Q ss_pred             CCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCcccc
Q 024230          206 PFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                      ++...+...+.+...+  ..++++.+.|||+++.+.||+|+   +++|+.+.+|++.++.
T Consensus       283 ~~s~~ip~~p~y~~~l--~~~mkr~G~~Ed~a~~i~~L~sd---~l~~~~~~~D~~~~~r  337 (405)
T 3zu3_A          283 QASSAIPMMPLYLSLL--FKVMKEKGTHEGCIEQVYSLYKD---SLCGDSPHMDQEGRLR  337 (405)
T ss_dssp             HHHHTSTTHHHHHHHH--HHHHHHHTCCCCHHHHHHHHHHH---TTSSSCCCBCTTSCEE
T ss_pred             chhhcCCCCcHHHHHH--HHHHhcCCCcHHHHHHHHHHHhc---cccCCCCCcCCCcCCC
Confidence            9887664333332222  22688999999999999999977   6899999999998775

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=6.5e-42  Score=321.36  Aligned_cols=236  Identities=25%  Similarity=0.352  Sum_probs=193.4

Q ss_pred             cccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeC---------ChhHHHHHHHHHHhcCCeEEEEEccCCCHHH
Q 024230           13 QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSR---------TETELNECIHHLQMKGLKVTGSVCDVSSRPQ   83 (270)
Q Consensus        13 ~~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r---------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   83 (270)
                      ...++|+||++|||||++|||+++|++|+++|++|++++|         +.+.+++..+++...+..+   .+|+++.++
T Consensus        12 ~~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~D~~d~~~   88 (613)
T 3oml_A           12 DGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEA---VADYNSVID   88 (613)
T ss_dssp             ---CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCE---EECCCCGGG
T ss_pred             ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeE---EEEeCCHHH
Confidence            4567999999999999999999999999999999999988         6677778888888776654   379999999


Q ss_pred             HHHHHHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccccc
Q 024230           84 RQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVS  163 (270)
Q Consensus        84 ~~~~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~  163 (270)
                      ++++++++.+.+ +++|+||||||+....++.+.+.++|++++++|+.|++.++++++|+|++++.|+||++||.++..+
T Consensus        89 ~~~~~~~~~~~~-g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~  167 (613)
T 3oml_A           89 GAKVIETAIKAF-GRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYG  167 (613)
T ss_dssp             HHHHHC-----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHC
T ss_pred             HHHHHHHHHHHC-CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCC
Confidence            999999999988 8999999999998888999999999999999999999999999999999988899999999999999


Q ss_pred             CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHH
Q 024230          164 ANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFL  243 (270)
Q Consensus       164 ~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  243 (270)
                      .++...|++||+|+++|+++++.|++++||+||+|+||++ |+|.......     ..      .+..+|+|++++++||
T Consensus       168 ~~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~~~~-----~~------~~~~~pedvA~~v~~L  235 (613)
T 3oml_A          168 NFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGILPD-----IL------FNELKPKLIAPVVAYL  235 (613)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCCCCH-----HH------HTTCCGGGTHHHHHHT
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhccch-----hh------hhcCCHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999975 6666544221     11      1235899999999999


Q ss_pred             hCCCCCCccCcEEeecCCcccc
Q 024230          244 CMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       244 ~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                      +++. .++||+++.+|||+...
T Consensus       236 ~s~~-~~~tG~~i~vdGG~~~~  256 (613)
T 3oml_A          236 CHES-CEDNGSYIESAAGWATK  256 (613)
T ss_dssp             TSTT-CCCCSCEEEEETTEEEE
T ss_pred             cCCC-cCCCceEEEECCCeEEE
Confidence            9998 89999999999998764

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=1.4e-42  Score=290.57  Aligned_cols=225  Identities=16%  Similarity=0.088  Sum_probs=198.3

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      ..++|++|||||++|||+++|++|+++|++|++++|+++..+          ....++.+|++|+++++++++++.+.++
T Consensus         4 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~D~~~~~~v~~~~~~~~~~~~   73 (241)
T 1dhr_A            4 SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA----------SASVIVKMTDSFTEQADQVTAEVGKLLG   73 (241)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS----------SEEEECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc----------CCcEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            467899999999999999999999999999999999876532          2467789999999999999999998884


Q ss_pred             -CcccEEEECCCCCCCCCC-CCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           97 -GKLNIFVNNVGTSVLKPT-LEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        97 -~~id~li~~ag~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                       +++|++|||||.....++ .+.+.++|++.+++|+.+++.++++++|+|++  .|+||++||..+..+.++...|++||
T Consensus        74 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asK  151 (241)
T 1dhr_A           74 DQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALDGTPGMIGYGMAK  151 (241)
T ss_dssp             TCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHH
T ss_pred             CCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCEEEEECCHHHccCCCCchHHHHHH
Confidence             489999999999877777 78899999999999999999999999999965  48999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHc--cCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCcc
Q 024230          175 GAMNQLAKNLACEWA--KDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT  252 (270)
Q Consensus       175 aal~~~~~sla~el~--~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  252 (270)
                      +++++|+++++.|++  ++||+|++|+||+++|+|........          ...+..+++|+|+.++|++++...+++
T Consensus       152 ~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~----------~~~~~~~~~~vA~~v~~l~~~~~~~~~  221 (241)
T 1dhr_A          152 GAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPEA----------DFSSWTPLEFLVETFHDWITGNKRPNS  221 (241)
T ss_dssp             HHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTTS----------CGGGSEEHHHHHHHHHHHHTTTTCCCT
T ss_pred             HHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccccccCcch----------hhccCCCHHHHHHHHHHHhcCCCcCcc
Confidence            999999999999999  89999999999999998764432111          112345789999999999999999999


Q ss_pred             CcEEeecCCcc
Q 024230          253 GQTVCIDGGFT  263 (270)
Q Consensus       253 G~~i~vdgG~~  263 (270)
                      |+.+.+|||..
T Consensus       222 G~~~~v~g~~~  232 (241)
T 1dhr_A          222 GSLIQVVTTDG  232 (241)
T ss_dssp             TCEEEEEEETT
T ss_pred             ceEEEEeCCCC
Confidence            99999999865

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=4.1e-42  Score=295.60  Aligned_cols=233  Identities=18%  Similarity=0.175  Sum_probs=190.2

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      .+++++||++|||||++|||+++|++|+++|++|++++|+++++++..+++   +.++.++.+|++|.++++++++++  
T Consensus        10 ~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~v~~~~~~~--   84 (291)
T 3rd5_A           10 DLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM---AGQVEVRELDLQDLSSVRRFADGV--   84 (291)
T ss_dssp             GCCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS---SSEEEEEECCTTCHHHHHHHHHTC--
T ss_pred             hccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---cCCeeEEEcCCCCHHHHHHHHHhc--
Confidence            467899999999999999999999999999999999999998887765544   568999999999999999988765  


Q ss_pred             HcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccccc----------
Q 024230           94 LFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVS----------  163 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~----------  163 (270)
                         +++|+||||||...  +..+.+.++|++++++|+.+++.++++++|+|.+    +||++||..++.+          
T Consensus        85 ---~~iD~lv~nAg~~~--~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~----riv~isS~~~~~~~~~~~~~~~~  155 (291)
T 3rd5_A           85 ---SGADVLINNAGIMA--VPYALTVDGFESQIGTNHLGHFALTNLLLPRLTD----RVVTVSSMAHWPGRINLEDLNWR  155 (291)
T ss_dssp             ---CCEEEEEECCCCCS--CCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE----EEEEECCGGGTTCCCCSSCTTCS
T ss_pred             ---CCCCEEEECCcCCC--CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh----heeEeechhhccCCCCccccccc
Confidence               68999999999864  3356788899999999999999999999999854    8999999988765          


Q ss_pred             ---CCCChhhhhhHHHHHHHHHHHHHHHccCC--ceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCC-hHhHH
Q 024230          164 ---ANVGTVYSATKGAMNQLAKNLACEWAKDN--IRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGE-PKEVS  237 (270)
Q Consensus       164 ---~~~~~~y~~sKaal~~~~~sla~el~~~~--i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~dva  237 (270)
                         .++...|++||+|+++|+++++.|++++|  |+|++|+||+++|++......  .. .......+.++... |+|+|
T Consensus       156 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~A  232 (291)
T 3rd5_A          156 SRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGR--KL-GDALMSAATRVVATDADFGA  232 (291)
T ss_dssp             SSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC-----------------------CHHHHHHH
T ss_pred             ccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccch--HH-HHHHHHHHHHHHhCCHHHHH
Confidence               23456899999999999999999999988  999999999999999876521  11 11222344555554 99999


Q ss_pred             HHHHHHhCCCCCCccCcEEeecCCcccc
Q 024230          238 SLVAFLCMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       238 ~~~~~l~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                      +.++|++++  ++++|+.+.+|||+.-.
T Consensus       233 ~~~~~l~~~--~~~~G~~~~vdgG~~~~  258 (291)
T 3rd5_A          233 RQTLYAASQ--DLPGDSFVGPRFGYLGR  258 (291)
T ss_dssp             HHHHHHHHS--CCCTTCEEEETTSSSSC
T ss_pred             HHHHHHHcC--CCCCCceeCCcccccCc
Confidence            999999997  48999999999998643

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=7.7e-42  Score=288.18  Aligned_cols=230  Identities=17%  Similarity=0.211  Sum_probs=192.9

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCe-EEEeeCChhHHHHHHHHHHhc--CCeEEEEEccCCCH-HHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGAT-VHTCSRTETELNECIHHLQMK--GLKVTGSVCDVSSR-PQRQTLINTV   91 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~-v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~-~~~~~~~~~i   91 (270)
                      |+|+||+++||||++|||+++|++|+++|++ |++++|+++.  +..+++.+.  +.++.++.+|++|+ ++++++++++
T Consensus         1 m~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   78 (254)
T 1sby_A            1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKI   78 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHH
Confidence            5689999999999999999999999999996 9999998642  112223222  45789999999998 9999999999


Q ss_pred             HHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC---CcEEEEecCccccccCCCCh
Q 024230           92 SSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG---AASIVLMSSALGIVSANVGT  168 (270)
Q Consensus        92 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~---~g~ii~iss~~~~~~~~~~~  168 (270)
                      .+.+ +++|++|||||..        +.++|++.+++|+.+++.++++++|+|.+++   .|+||++||..++.+.++..
T Consensus        79 ~~~~-g~id~lv~~Ag~~--------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  149 (254)
T 1sby_A           79 FDQL-KTVDILINGAGIL--------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVP  149 (254)
T ss_dssp             HHHH-SCCCEEEECCCCC--------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSH
T ss_pred             HHhc-CCCCEEEECCccC--------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCch
Confidence            9988 7999999999974        4567899999999999999999999997664   58999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC---ChhhHHHHhhcCCCCCCCChHhHHHHHHHHhC
Q 024230          169 VYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG---NGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCM  245 (270)
Q Consensus       169 ~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (270)
                      .|++||+++++|+++++.|+.+.||+|++|+||+++|++......   ............|   ..+|+|+|+.++++++
T Consensus       150 ~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~dvA~~i~~~~~  226 (254)
T 1sby_A          150 VYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHP---TQTSEQCGQNFVKAIE  226 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSC---CEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHhcCC---CCCHHHHHHHHHHHHH
Confidence            999999999999999999999889999999999999998654321   1112222322223   3489999999999995


Q ss_pred             CCCCCccCcEEeecCCc
Q 024230          246 PAASYITGQTVCIDGGF  262 (270)
Q Consensus       246 ~~~~~~~G~~i~vdgG~  262 (270)
                         .+.+|+++.+|||+
T Consensus       227 ---~~~~G~~~~v~gG~  240 (254)
T 1sby_A          227 ---ANKNGAIWKLDLGT  240 (254)
T ss_dssp             ---HCCTTCEEEEETTE
T ss_pred             ---cCCCCCEEEEeCCc
Confidence               56899999999995

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=2.2e-40  Score=288.42  Aligned_cols=232  Identities=21%  Similarity=0.284  Sum_probs=194.9

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCC--eEEEEEccCCCHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGL--KVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      +++++||+||||||++|||+++|++|+++|++|++++|+.+.+++..+++...+.  ++.++.+|++++++++++++++.
T Consensus         3 m~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   82 (319)
T 3ioy_A            3 LKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVE   82 (319)
T ss_dssp             CCCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999999999998888877655  89999999999999999999999


Q ss_pred             HHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc------CCcEEEEecCccccccCCC
Q 024230           93 SLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRAS------GAASIVLMSSALGIVSANV  166 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~------~~g~ii~iss~~~~~~~~~  166 (270)
                      +.+ +++|+||||||.....++.+.+.++|++++++|+.|+++++++++|+|.++      +.|+||++||..+..+.++
T Consensus        83 ~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~  161 (319)
T 3ioy_A           83 ARF-GPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGS  161 (319)
T ss_dssp             HHT-CCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSS
T ss_pred             HhC-CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCC
Confidence            998 799999999999888899999999999999999999999999999999875      5789999999999999999


Q ss_pred             ChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHH---------HhhcCC-CCCCCChHhH
Q 024230          167 GTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDE---------VKSRTP-MGRLGEPKEV  236 (270)
Q Consensus       167 ~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~---------~~~~~~-~~~~~~~~dv  236 (270)
                      ...|++||+|+++|+++++.|+.+.||+|++|+||+|+|++.............         ...... .....+|+|+
T Consensus       162 ~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~v  241 (319)
T 3ioy_A          162 PGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPDVI  241 (319)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------CCGGGSSBCHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcCCCHHHH
Confidence            999999999999999999999999999999999999999987654222111100         000000 0112689999


Q ss_pred             HHHHHHHhCCC
Q 024230          237 SSLVAFLCMPA  247 (270)
Q Consensus       237 a~~~~~l~s~~  247 (270)
                      |+.++..+...
T Consensus       242 A~~~~~al~~~  252 (319)
T 3ioy_A          242 GARVIEAMKAN  252 (319)
T ss_dssp             HHHHHHHHHTT
T ss_pred             HHHHHHHHHcC
Confidence            99999988653

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=4.4e-41  Score=280.93  Aligned_cols=229  Identities=26%  Similarity=0.304  Sum_probs=200.5

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      ++|++|||||++|||++++++|+++|++|++++|+++ .           .++.++.+|++|+++++++++++ +.+ ++
T Consensus         1 ~~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~-----------~~~~~~~~D~~~~~~~~~~~~~~-~~~-~~   66 (242)
T 1uay_A            1 MERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G-----------EDLIYVEGDVTREEDVRRAVARA-QEE-AP   66 (242)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S-----------SSSEEEECCTTCHHHHHHHHHHH-HHH-SC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c-----------cceEEEeCCCCCHHHHHHHHHHH-Hhh-CC
Confidence            3689999999999999999999999999999999875 2           23578899999999999999999 777 79


Q ss_pred             ccEEEECCCCCCCCCCCCC----CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC---C---cEEEEecCccccccCCCCh
Q 024230           99 LNIFVNNVGTSVLKPTLEY----NAEDFSLVMSTNFESAFHLCQLAHPLLRASG---A---ASIVLMSSALGIVSANVGT  168 (270)
Q Consensus        99 id~li~~ag~~~~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~---~---g~ii~iss~~~~~~~~~~~  168 (270)
                      +|++|||||.....++.+.    +.++|++.+++|+.+++.+++++.|.|.+++   .   ++||++||..++.+.+...
T Consensus        67 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~  146 (242)
T 1uay_A           67 LFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQA  146 (242)
T ss_dssp             EEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCH
T ss_pred             ceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCc
Confidence            9999999998766666554    4559999999999999999999999998764   3   4999999999999989999


Q ss_pred             hhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCC-CCCCChHhHHHHHHHHhCCC
Q 024230          169 VYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPM-GRLGEPKEVSSLVAFLCMPA  247 (270)
Q Consensus       169 ~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~s~~  247 (270)
                      .|++||++++.++++++.|++++||+++.|+||+++|++....  .+.....+....|. +++.+|+|+++++++++++ 
T Consensus       147 ~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~-  223 (242)
T 1uay_A          147 AYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL--PEKAKASLAAQVPFPPRLGRPEEYAALVLHILEN-  223 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTS--CHHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHHC-
T ss_pred             hhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhcc--chhHHHHHHhhCCCcccCCCHHHHHHHHHHHhcC-
Confidence            9999999999999999999999999999999999999986543  23334455556677 8899999999999999987 


Q ss_pred             CCCccCcEEeecCCcccc
Q 024230          248 ASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       248 ~~~~~G~~i~vdgG~~~~  265 (270)
                       ++++|+++.+|||+++.
T Consensus       224 -~~~~G~~~~v~gG~~~~  240 (242)
T 1uay_A          224 -PMLNGEVVRLDGALRMA  240 (242)
T ss_dssp             -TTCCSCEEEESTTCCCC
T ss_pred             -CCCCCcEEEEcCCeecC
Confidence             78999999999999875

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=3.2e-42  Score=305.32  Aligned_cols=245  Identities=16%  Similarity=0.119  Sum_probs=204.4

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHH-CCCeEEEeeCChhHHH------------HHHHHHHhcCCeEEEEEccCCCHHHH
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSM-LGATVHTCSRTETELN------------ECIHHLQMKGLKVTGSVCDVSSRPQR   84 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~-~G~~v~l~~r~~~~~~------------~~~~~~~~~~~~~~~~~~D~~~~~~~   84 (270)
                      ..||++|||||++|||+++|+.|++ +|++|++++|+.+.++            .+.+++...|.++..+.+|+++++++
T Consensus        59 ~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v  138 (422)
T 3s8m_A           59 DGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAAR  138 (422)
T ss_dssp             SSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred             cCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHH
Confidence            3589999999999999999999999 9999999999865432            23456667788899999999999999


Q ss_pred             HHHHHHHHHHcCCcccEEEECCCCC-------------CCCCC---------------------CCCCHHHHHHHHHHhh
Q 024230           85 QTLINTVSSLFNGKLNIFVNNVGTS-------------VLKPT---------------------LEYNAEDFSLVMSTNF  130 (270)
Q Consensus        85 ~~~~~~i~~~~~~~id~li~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~n~  130 (270)
                      +++++++.+.++|++|+||||||..             ...++                     .+.+.++|++++++|.
T Consensus       139 ~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~  218 (422)
T 3s8m_A          139 AQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMG  218 (422)
T ss_dssp             HHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhc
Confidence            9999999999856999999999972             23344                     3689999999999999


Q ss_pred             HHHH-HHHHHHHHHHHhcCCcEEEEecCccccccCCCC--hhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCC
Q 024230          131 ESAF-HLCQLAHPLLRASGAASIVLMSSALGIVSANVG--TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPF  207 (270)
Q Consensus       131 ~~~~-~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~--~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~  207 (270)
                      .+.+ .+++++.+.+...++|+||++||..+..+.|.+  ..|++||+|+.+|+|+||.|++++|||||+|+||++.|++
T Consensus       219 ~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~  298 (422)
T 3s8m_A          219 GQDWELWIDALEGAGVLADGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQA  298 (422)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTT
T ss_pred             hhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChh
Confidence            9987 778887765433446899999999999888866  8999999999999999999999999999999999999999


Q ss_pred             CccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCcc-CcEEeecCCcccc
Q 024230          208 TEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT-GQTVCIDGGFTVN  265 (270)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~-G~~i~vdgG~~~~  265 (270)
                      ...+...+.+....  ..++++.+.|||+++.+.||+|+.- |.+ |+...+|++.++.
T Consensus       299 ~~~ip~~~~~~~~~--~~~m~r~G~pEdva~~v~~L~sd~l-y~~~~~~~~~d~~~~~r  354 (422)
T 3s8m_A          299 SAAIPVMPLYISMV--YKIMKEKGLHEGTIEQLDRLFRERL-YRQDGQPAEVDEQNRLR  354 (422)
T ss_dssp             GGGSTHHHHHHHHH--HHHHHHTTCCCCHHHHHHHHHHHTT-TCTTCCCCCCCTTSCEE
T ss_pred             hhcCCCChHHHHHH--HhhhcCCcChHHHHHHHHHHhcchh-hccCCCCcccCCCCCCc
Confidence            87663333222222  2368899999999999999998753 554 7777799988773

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.3e-41  Score=293.29  Aligned_cols=242  Identities=19%  Similarity=0.215  Sum_probs=191.5

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCC-----hhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRT-----ETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINT   90 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   90 (270)
                      |++++|+++||||++|||+++|++|+++|++|++++|+     .+.++++.+.+...+.++.++.+|++|++++++++++
T Consensus         1 M~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~   80 (324)
T 3u9l_A            1 MVMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQ   80 (324)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH
Confidence            56789999999999999999999999999999987665     5666777777777778899999999999999999999


Q ss_pred             HHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccccc-CCCChh
Q 024230           91 VSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVS-ANVGTV  169 (270)
Q Consensus        91 i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~-~~~~~~  169 (270)
                      +.+.+ +++|++|||||....+++.+.+.++|++++++|+.|++.++++++|+|++++.|+||++||..+... .++...
T Consensus        81 ~~~~~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~~~~~  159 (324)
T 3u9l_A           81 IIGED-GRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAP  159 (324)
T ss_dssp             HHHHH-SCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCSSCHH
T ss_pred             HHHHc-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCCcchh
Confidence            99998 8999999999998888999999999999999999999999999999999988899999999998854 467788


Q ss_pred             hhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC----ChhhH------------HHHhh--cCCCCCCC
Q 024230          170 YSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG----NGKFV------------DEVKS--RTPMGRLG  231 (270)
Q Consensus       170 y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~----~~~~~------------~~~~~--~~~~~~~~  231 (270)
                      |++||+|+++|+++++.|++++||+|++|+||++.|++......    .....            +++..  ........
T Consensus       160 Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (324)
T 3u9l_A          160 YFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKAFAAIVPPDA  239 (324)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHHHHHHHHHHHTSCTTC
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCHHHHHHHHHHhcCCCC
Confidence            99999999999999999999999999999999999876432111    00000            01000  01112235


Q ss_pred             ChHhHHHHHHHHhCCCCCCccCcEEeec
Q 024230          232 EPKEVSSLVAFLCMPAASYITGQTVCID  259 (270)
Q Consensus       232 ~~~dva~~~~~l~s~~~~~~~G~~i~vd  259 (270)
                      +|+++++++++++.... ......+.++
T Consensus       240 ~p~~vA~aiv~~~~~~~-~~~~~~~~~g  266 (324)
T 3u9l_A          240 DVSLVADAIVRVVGTAS-GKRPFRVHVD  266 (324)
T ss_dssp             CTHHHHHHHHHHHTSCT-TCCCSEEEEC
T ss_pred             CHHHHHHHHHHHhcCCC-CCCCeEEEeC
Confidence            78899999988886432 1234566665

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=5.9e-42  Score=285.94  Aligned_cols=225  Identities=16%  Similarity=0.139  Sum_probs=196.9

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC-
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN-   96 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~-   96 (270)
                      |++|++|||||++|||+++|++|+++|++|++++|+++..+          ....++.+|++|+++++++++++.+.++ 
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   70 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA----------DSNILVDGNKNWTEQEQSILEQTASSLQG   70 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS----------SEEEECCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc----------cccEEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            46899999999999999999999999999999999876532          2466788999999999999999998874 


Q ss_pred             CcccEEEECCCCCCCCCC-CCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHH
Q 024230           97 GKLNIFVNNVGTSVLKPT-LEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKG  175 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKa  175 (270)
                      +++|++|||||.....++ .+.+.++|++.+++|+.+++.++++++|+|++  .|+||++||..+..+.++...|++||+
T Consensus        71 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~sK~  148 (236)
T 1ooe_A           71 SQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAMGPTPSMIGYGMAKA  148 (236)
T ss_dssp             CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHH
T ss_pred             CCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEECchhhccCCCCcHHHHHHHH
Confidence            489999999999877777 78889999999999999999999999999965  479999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHc--cCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHH-HHhCCCCCCcc
Q 024230          176 AMNQLAKNLACEWA--KDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVA-FLCMPAASYIT  252 (270)
Q Consensus       176 al~~~~~sla~el~--~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~-~l~s~~~~~~~  252 (270)
                      ++++|+++++.|++  ++||+|++|+||+++|++.......          ....+..+|+|+|+.++ +|+++...+++
T Consensus       149 a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~----------~~~~~~~~~~dvA~~i~~~l~s~~~~~~~  218 (236)
T 1ooe_A          149 AVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPN----------ADHSSWTPLSFISEHLLKWTTETSSRPSS  218 (236)
T ss_dssp             HHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTT----------CCGGGCBCHHHHHHHHHHHHHCGGGCCCT
T ss_pred             HHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcCCC----------ccccccCCHHHHHHHHHHHHcCCCccccc
Confidence            99999999999998  9999999999999999875433211          11234568999999998 55588899999


Q ss_pred             CcEEeecCCccc
Q 024230          253 GQTVCIDGGFTV  264 (270)
Q Consensus       253 G~~i~vdgG~~~  264 (270)
                      |+.+.+|||...
T Consensus       219 G~~~~v~gg~~~  230 (236)
T 1ooe_A          219 GALLKITTENGT  230 (236)
T ss_dssp             TCEEEEEEETTE
T ss_pred             ccEEEEecCCCc
Confidence            999999999753

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.8e-40  Score=278.21  Aligned_cols=224  Identities=20%  Similarity=0.261  Sum_probs=193.4

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCC--CeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLG--ATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G--~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      |++|+++||||++|||++++++|+++|  ++|++++|+.+..+++.+ +  .+.++.++.+|++++++++++++++.+.+
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~-~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS-I--KDSRVHVLPLTVTCDKSLDTFVSKVGEIV   77 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT-C--CCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHh-c--cCCceEEEEeecCCHHHHHHHHHHHHHhc
Confidence            468999999999999999999999999  999999999887655432 1  35678999999999999999999999888


Q ss_pred             CC--cccEEEECCCCCC-CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc------C-----CcEEEEecCcccc
Q 024230           96 NG--KLNIFVNNVGTSV-LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRAS------G-----AASIVLMSSALGI  161 (270)
Q Consensus        96 ~~--~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~------~-----~g~ii~iss~~~~  161 (270)
                       +  ++|++|||||... ..++.+.+.+++++.+++|+.+++.++++++|+|.++      +     .++||++||..+.
T Consensus        78 -g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~  156 (250)
T 1yo6_A           78 -GSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGS  156 (250)
T ss_dssp             -GGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGC
T ss_pred             -CCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccc
Confidence             6  8999999999977 7788899999999999999999999999999999876      5     6899999999988


Q ss_pred             ccC-------CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChH
Q 024230          162 VSA-------NVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPK  234 (270)
Q Consensus       162 ~~~-------~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (270)
                      .+.       +....|++||+++++|+++++.|+++.||+++.|+||+++|++...                 ....+|+
T Consensus       157 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----------------~~~~~~~  219 (250)
T 1yo6_A          157 ITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK-----------------NAALTVE  219 (250)
T ss_dssp             STTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC------------------------------H
T ss_pred             cCCcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC-----------------CCCCCHH
Confidence            776       5678999999999999999999999999999999999999997642                 1346899


Q ss_pred             hHHHHHHHHhCCCCCCccCcEEeecCCc
Q 024230          235 EVSSLVAFLCMPAASYITGQTVCIDGGF  262 (270)
Q Consensus       235 dva~~~~~l~s~~~~~~~G~~i~vdgG~  262 (270)
                      |+++.+++++++...+++|+.+.+|||.
T Consensus       220 ~~a~~~~~~~~~~~~~~~G~~~~~~g~~  247 (250)
T 1yo6_A          220 QSTAELISSFNKLDNSHNGRFFMRNLKP  247 (250)
T ss_dssp             HHHHHHHHHHTTCCGGGTTCEEETTEEE
T ss_pred             HHHHHHHHHHhcccccCCCeEEEECCcC
Confidence            9999999999988889999999999985

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-39  Score=276.64  Aligned_cols=231  Identities=21%  Similarity=0.243  Sum_probs=201.8

Q ss_pred             cccCCCCCCEEEEecCCCcHHHHHHHHHHHCC---CeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHH
Q 024230           13 QNRWSLQGMTALVTGGTKGLGLAVVEELSMLG---ATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLIN   89 (270)
Q Consensus        13 ~~~~~l~gk~vlItG~s~giG~~la~~l~~~G---~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   89 (270)
                      ....++++|+||||||++|||+++|++|+++|   ++|++++|+.+..+.+ +++...+.++.++.+|+++.++++++++
T Consensus        14 ~~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~~~~~~~~~~Dl~~~~~v~~~~~   92 (267)
T 1sny_A           14 LVPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKNHSNIHILEIDLRNFDAYDKLVA   92 (267)
T ss_dssp             ------CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHHCTTEEEEECCTTCGGGHHHHHH
T ss_pred             ccccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhccCCceEEEEecCCChHHHHHHHH
Confidence            34567899999999999999999999999999   9999999998765543 3444446689999999999999999999


Q ss_pred             HHHHHcCC--cccEEEECCCCCC-CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc------C-----CcEEEEe
Q 024230           90 TVSSLFNG--KLNIFVNNVGTSV-LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRAS------G-----AASIVLM  155 (270)
Q Consensus        90 ~i~~~~~~--~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~------~-----~g~ii~i  155 (270)
                      ++.+.+ +  ++|++|||||... ..++.+.+.+++++.+++|+.+++.++++++|+|.++      +     .++||++
T Consensus        93 ~~~~~~-g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~i  171 (267)
T 1sny_A           93 DIEGVT-KDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINM  171 (267)
T ss_dssp             HHHHHH-GGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEE
T ss_pred             HHHHhc-CCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEE
Confidence            999988 5  7999999999977 7788889999999999999999999999999999876      3     5899999


Q ss_pred             cCccccccCC---CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCC
Q 024230          156 SSALGIVSAN---VGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGE  232 (270)
Q Consensus       156 ss~~~~~~~~---~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (270)
                      ||..+..+.+   ....|++||+++++|+++++.|++++||++++|+||+++|+|...                 ....+
T Consensus       172 sS~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----------------~~~~~  234 (267)
T 1sny_A          172 SSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS-----------------SAPLD  234 (267)
T ss_dssp             CCGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT-----------------TCSBC
T ss_pred             ecccccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC-----------------CCCCC
Confidence            9999887753   677899999999999999999999999999999999999998642                 12468


Q ss_pred             hHhHHHHHHHHhCCCCCCccCcEEeecCCc
Q 024230          233 PKEVSSLVAFLCMPAASYITGQTVCIDGGF  262 (270)
Q Consensus       233 ~~dva~~~~~l~s~~~~~~~G~~i~vdgG~  262 (270)
                      |+++++.+++++++....++|+.+.+|||.
T Consensus       235 ~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~  264 (267)
T 1sny_A          235 VPTSTGQIVQTISKLGEKQNGGFVNYDGTP  264 (267)
T ss_dssp             HHHHHHHHHHHHHHCCGGGTTCEECTTSCB
T ss_pred             HHHHHHHHHHHHHhcCcCCCCcEEccCCcC
Confidence            999999999999988889999999999986

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1e-39  Score=278.04  Aligned_cols=221  Identities=24%  Similarity=0.288  Sum_probs=199.9

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .+++++|+++||||++|||+++|++|+++|++|++++|+++..++..++++..+.++.++.+|++|+++++++++++.+.
T Consensus        26 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  105 (272)
T 1yb1_A           26 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE  105 (272)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            46799999999999999999999999999999999999999888888888877778999999999999999999999998


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                      + +++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||..++.+.++...|++||
T Consensus       106 ~-g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  184 (272)
T 1yb1_A          106 I-GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSK  184 (272)
T ss_dssp             T-CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHH
T ss_pred             C-CCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCchhHHHHH
Confidence            8 799999999999877788888999999999999999999999999999988889999999999998888888999999


Q ss_pred             HHHHHHHHHHHHHHc---cCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCC
Q 024230          175 GAMNQLAKNLACEWA---KDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAA  248 (270)
Q Consensus       175 aal~~~~~sla~el~---~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  248 (270)
                      ++++.|+++++.|+.   +.||+|++|+||+++|++...     . .      .+.++..+|+|+++.+++++.+..
T Consensus       185 ~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~-----~-~------~~~~~~~~~~dva~~i~~~~~~~~  249 (272)
T 1yb1_A          185 FAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN-----P-S------TSLGPTLEPEEVVNRLMHGILTEQ  249 (272)
T ss_dssp             HHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC-----T-H------HHHCCCCCHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc-----c-c------ccccCCCCHHHHHHHHHHHHHcCC
Confidence            999999999999997   679999999999999998532     1 0      123567899999999999997543

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=100.00  E-value=9.5e-41  Score=281.70  Aligned_cols=220  Identities=24%  Similarity=0.360  Sum_probs=175.9

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      |++|||||++|||+++|++|+++|++|++++|+++.++.             .+.+|+++.++++++++++    .+++|
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-------------~~~~Dl~~~~~v~~~~~~~----~~~id   64 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA-------------DLSTAEGRKQAIADVLAKC----SKGMD   64 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------------CTTSHHHHHHHHHHHHTTC----TTCCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc-------------ccccCCCCHHHHHHHHHHh----CCCCC
Confidence            689999999999999999999999999999998765321             1568999999988888643    26899


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccc-------------------
Q 024230          101 IFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGI-------------------  161 (270)
Q Consensus       101 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~-------------------  161 (270)
                      +||||||.....       +.|++.+++|+.+++.++++++|+|++++.++||++||..++                   
T Consensus        65 ~lv~~Ag~~~~~-------~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~  137 (257)
T 1fjh_A           65 GLVLCAGLGPQT-------KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEA  137 (257)
T ss_dssp             EEEECCCCCTTC-------SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHH
T ss_pred             EEEECCCCCCCc-------ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchh
Confidence            999999986411       128899999999999999999999998878999999999988                   


Q ss_pred             ---------ccCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhh--cCCCCCC
Q 024230          162 ---------VSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKS--RTPMGRL  230 (270)
Q Consensus       162 ---------~~~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~--~~~~~~~  230 (270)
                               .+.+....|++||++++.|+++++.|++++||+|++|+||+++|++........ .......  ..|.++.
T Consensus       138 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~  216 (257)
T 1fjh_A          138 KARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDP-RYGESIAKFVPPMGRR  216 (257)
T ss_dssp             HHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC----------------------CCCSTTSC
T ss_pred             hhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccch-hHHHHHHhcccccCCC
Confidence                     344466789999999999999999999999999999999999999876542111 1111111  4577789


Q ss_pred             CChHhHHHHHHHHhCCCCCCccCcEEeecCCcccc
Q 024230          231 GEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       231 ~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                      .+|+|+|++++|++++..++++|+.+.+|||+.+.
T Consensus       217 ~~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG~~~~  251 (257)
T 1fjh_A          217 AEPSEMASVIAFLMSPAASYVHGAQIVIDGGIDAV  251 (257)
T ss_dssp             CCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHH
T ss_pred             CCHHHHHHHHHHHhCchhcCCcCCEEEECCCcccc
Confidence            99999999999999988889999999999998654

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=4.6e-40  Score=275.92  Aligned_cols=226  Identities=22%  Similarity=0.249  Sum_probs=161.4

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      |+|+||++|||||++|||+++|++|++ |++|++++|+++.+++..+     ..++.++.+|+++.++ .+.+.++.+.+
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~-~~~~~~~~~~~   73 (245)
T 3e9n_A            1 MSLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-----IEGVEPIESDIVKEVL-EEGGVDKLKNL   73 (245)
T ss_dssp             -----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-----STTEEEEECCHHHHHH-TSSSCGGGTTC
T ss_pred             CCCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-----hcCCcceecccchHHH-HHHHHHHHHhc
Confidence            578999999999999999999999988 9999999999888766543     2358889999998776 44444444555


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKG  175 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKa  175 (270)
                       +++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++ |+||++||..+..+.++...|++||+
T Consensus        74 -~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~  151 (245)
T 3e9n_A           74 -DHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPHPGNTIYAASKH  151 (245)
T ss_dssp             -SCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC----------CHHHHHHHH
T ss_pred             -CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCCCCchHHHHHHH
Confidence             7999999999998888888999999999999999999999999999998765 89999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcE
Q 024230          176 AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT  255 (270)
Q Consensus       176 al~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  255 (270)
                      |+++|+++++.|++++||+|++|+||+++|++........      ....+.++..+|+|+|++++|+++...   ++++
T Consensus       152 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~------~~~~~~~~~~~p~dvA~~i~~l~~~~~---~~~~  222 (245)
T 3e9n_A          152 ALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDSQ------GTNFRPEIYIEPKEIANAIRFVIDAGE---TTQI  222 (245)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCC----------------------CCGGGSCHHHHHHHHHHHHTSCT---TEEE
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhhh------hcccccccCCCHHHHHHHHHHHHcCCC---ccce
Confidence            9999999999999999999999999999999876653221      122344667899999999999997653   4555


Q ss_pred             Eeec
Q 024230          256 VCID  259 (270)
Q Consensus       256 i~vd  259 (270)
                      +++|
T Consensus       223 ~~i~  226 (245)
T 3e9n_A          223 TNVD  226 (245)
T ss_dssp             EEEE
T ss_pred             eeeE
Confidence            5544

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=1.7e-38  Score=274.52  Aligned_cols=221  Identities=24%  Similarity=0.315  Sum_probs=190.2

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcC-CeEEEEEccCCCH-HHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG-LKVTGSVCDVSSR-PQRQTLINTVSS   93 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~-~~~~~~~~~i~~   93 (270)
                      ..+++|+||||||++|||+++|++|+++|++|++++|+.+++++..+++...+ .++.++.+|++++ ++++++++++.+
T Consensus         8 ~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~   87 (311)
T 3o26_A            8 TVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKT   87 (311)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             ccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999999988888887764 5799999999998 999999999999


Q ss_pred             HcCCcccEEEECCCCCCC------------------------------CCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHH
Q 024230           94 LFNGKLNIFVNNVGTSVL------------------------------KPTLEYNAEDFSLVMSTNFESAFHLCQLAHPL  143 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~------------------------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  143 (270)
                      .+ +++|+||||||+...                              .++.+.+.+++++.+++|+.|++.++++++|+
T Consensus        88 ~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  166 (311)
T 3o26_A           88 HF-GKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPL  166 (311)
T ss_dssp             HH-SSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             hC-CCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHh
Confidence            88 799999999998632                              24556789999999999999999999999999


Q ss_pred             HHhcCCcEEEEecCccccccC-------------------------------------------CCChhhhhhHHHHHHH
Q 024230          144 LRASGAASIVLMSSALGIVSA-------------------------------------------NVGTVYSATKGAMNQL  180 (270)
Q Consensus       144 m~~~~~g~ii~iss~~~~~~~-------------------------------------------~~~~~y~~sKaal~~~  180 (270)
                      |++++.++||++||..+..+.                                           ++...|++||+|+++|
T Consensus       167 l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~  246 (311)
T 3o26_A          167 LQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAY  246 (311)
T ss_dssp             HTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHH
T ss_pred             hccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHH
Confidence            998888999999999887653                                           4557899999999999


Q ss_pred             HHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEE
Q 024230          181 AKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTV  256 (270)
Q Consensus       181 ~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i  256 (270)
                      +++++.|+.+  |+|++|+||+|+|+|.....                 ..++++.++.+++++.......+|..+
T Consensus       247 ~~~la~e~~~--i~v~~v~PG~v~T~~~~~~~-----------------~~~~~~~a~~~~~~~~~~~~~~~g~~~  303 (311)
T 3o26_A          247 TRVLANKIPK--FQVNCVCPGLVKTEMNYGIG-----------------NYTAEEGAEHVVRIALFPDDGPSGFFY  303 (311)
T ss_dssp             HHHHHHHCTT--SEEEEECCCSBCSGGGTTCC-----------------SBCHHHHHHHHHHHHTCCSSCCCSCEE
T ss_pred             HHHHHhhcCC--ceEEEecCCceecCCcCCCC-----------------CCCHHHHHHHHHHHHhCCCCCCCceEe
Confidence            9999999864  99999999999999875531                 247999999999998755444455444

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=100.00  E-value=6.9e-40  Score=292.39  Aligned_cols=243  Identities=13%  Similarity=0.065  Sum_probs=205.2

Q ss_pred             CCCCEEEEecCCCcHHHH--HHHHHHHCCCeEEEeeCChhH------------HHHHHHHHHhcCCeEEEEEccCCCHHH
Q 024230           18 LQGMTALVTGGTKGLGLA--VVEELSMLGATVHTCSRTETE------------LNECIHHLQMKGLKVTGSVCDVSSRPQ   83 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~--la~~l~~~G~~v~l~~r~~~~------------~~~~~~~~~~~~~~~~~~~~D~~~~~~   83 (270)
                      ..||++|||||++|||++  +++.|+++|++|++++|+.+.            .+.+.+.+...+.++.++.+|++++++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~  137 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET  137 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence            789999999999999999  999999999999999997543            344555566667889999999999999


Q ss_pred             HHHHHHHHHHHcCCcccEEEECCCCC-------------CCCCC---------------------CCCCHHHHHHHHHHh
Q 024230           84 RQTLINTVSSLFNGKLNIFVNNVGTS-------------VLKPT---------------------LEYNAEDFSLVMSTN  129 (270)
Q Consensus        84 ~~~~~~~i~~~~~~~id~li~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~n  129 (270)
                      ++++++++.+.+ +++|+||||||..             ..+++                     .+.+.++|++++++|
T Consensus       138 v~~~v~~i~~~~-G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn  216 (418)
T 4eue_A          138 KDKVIKYIKDEF-GKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVM  216 (418)
T ss_dssp             HHHHHHHHHHTT-CCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHc-CCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHh
Confidence            999999999998 8999999999974             23344                     357999999999999


Q ss_pred             hHHHH-HHHHHHHHHHHhcCCcEEEEecCccccccCCCC--hhhhhhHHHHHHHHHHHHHHHcc-CCceEEEEecCcccC
Q 024230          130 FESAF-HLCQLAHPLLRASGAASIVLMSSALGIVSANVG--TVYSATKGAMNQLAKNLACEWAK-DNIRTNSVAPWYIRT  205 (270)
Q Consensus       130 ~~~~~-~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~--~~y~~sKaal~~~~~sla~el~~-~~i~v~~v~pG~v~t  205 (270)
                      ..+.+ .+++++.+.+...++|+||++||..+..+.|.+  ..|++||+|+++|+|+|+.|+++ +|||||+|+||++.|
T Consensus       217 ~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T  296 (418)
T 4eue_A          217 GGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVT  296 (418)
T ss_dssp             SSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCC
T ss_pred             hHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcC
Confidence            99988 777887765544456899999999999998888  99999999999999999999999 999999999999999


Q ss_pred             CCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCcccc
Q 024230          206 PFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                      ++...+...+.+...+  ..++++.+.+|++++.+.||+++  ++.+|+.+.+|+|.++.
T Consensus       297 ~~s~~ip~~p~y~~~~--~~~mk~~G~~E~v~e~~~~L~sd--~~~~g~~~~~D~~~~~r  352 (418)
T 4eue_A          297 KASAYIPTFPLYAAIL--YKVMKEKNIHENCIMQIERMFSE--KIYSNEKIQFDDKGRLR  352 (418)
T ss_dssp             HHHHTSTTHHHHHHHH--HHHHHHTTCCCCHHHHHHHHHHH--TTSSSSCCCCCTTSCEE
T ss_pred             hhhhcCCCCcHHHHHH--HHHHhhcCChHHHHHHHHHHhhc--cccCCCccccCCCceee
Confidence            9877664333222222  22566788999999999999986  66789999999987764

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=7e-40  Score=286.09  Aligned_cols=235  Identities=18%  Similarity=0.237  Sum_probs=188.7

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHh------cCCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQM------KGLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      ++|+|||||+++|||+++|++|+++|++|++++|+.+.+++..+.++.      .+.++.++.+|++|+++++++++++.
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            478999999999999999999999999998887765544333333322      24678999999999999999998873


Q ss_pred             HHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhh
Q 024230           93 SLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSA  172 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~  172 (270)
                        + +++|+||||||.....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.++...|++
T Consensus        81 --~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~~~~Y~a  157 (327)
T 1jtv_A           81 --E-GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCA  157 (327)
T ss_dssp             --T-SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHH
T ss_pred             --c-CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCCChHHHH
Confidence              3 7899999999998778888999999999999999999999999999998887899999999999999899999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCCh---------hhHH---HHhh--cCCCCCC-CChHhHH
Q 024230          173 TKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNG---------KFVD---EVKS--RTPMGRL-GEPKEVS  237 (270)
Q Consensus       173 sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~---------~~~~---~~~~--~~~~~~~-~~~~dva  237 (270)
                      ||+++++|+++++.|++++||+|++|+||+++|+|........         ....   ....  ..+.++. .+|+|+|
T Consensus       158 SK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA  237 (327)
T 1jtv_A          158 SKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVA  237 (327)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHhhhhcCCCHHHHH
Confidence            9999999999999999999999999999999999976543221         0000   0000  0112233 4899999


Q ss_pred             HHHHHHhCC---CCCCccCcEE
Q 024230          238 SLVAFLCMP---AASYITGQTV  256 (270)
Q Consensus       238 ~~~~~l~s~---~~~~~~G~~i  256 (270)
                      +.++|++++   ..++++|+.+
T Consensus       238 ~~i~~l~~~~~~~~~~~tg~~~  259 (327)
T 1jtv_A          238 EVFLTALRAPKPTLRYFTTERF  259 (327)
T ss_dssp             HHHHHHHHCSSCCSEEESCSTT
T ss_pred             HHHHHHHcCCCCCeEEEeCchH
Confidence            999999874   4567888764

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=4.7e-38  Score=267.06  Aligned_cols=222  Identities=26%  Similarity=0.345  Sum_probs=193.2

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHH-CCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSM-LGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~-~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      .++|+||||||++|||++++++|++ +|++|++++|+.+..++..+++...+.++.++.+|+++.++++++++++.+.+ 
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-   80 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY-   80 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhc-
Confidence            4689999999999999999999999 99999999999998888888887777788999999999999999999999988 


Q ss_pred             CcccEEEECCCCCCCCCCCCCC-HHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC-----------
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYN-AEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA-----------  164 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~-----------  164 (270)
                      +++|+||||||...... .+.+ .+++++++++|+.++++++++++|+|++  .++||++||..++.+.           
T Consensus        81 g~id~li~~Ag~~~~~~-~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~~~~~~~  157 (276)
T 1wma_A           81 GGLDVLVNNAGIAFKVA-DPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIMSVRALKSCSPELQQKF  157 (276)
T ss_dssp             SSEEEEEECCCCCCCTT-CCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHHHHTSCHHHHHHH
T ss_pred             CCCCEEEECCcccccCC-CccccHHHHHhhhheeeeeHHHHHHHHHHhhCC--CCEEEEECChhhhcccccCChhHHhhc
Confidence            79999999999865443 3334 5899999999999999999999999865  3799999998876430           


Q ss_pred             ------------------------------CCChhhhhhHHHHHHHHHHHHHHHcc----CCceEEEEecCcccCCCCcc
Q 024230          165 ------------------------------NVGTVYSATKGAMNQLAKNLACEWAK----DNIRTNSVAPWYIRTPFTEP  210 (270)
Q Consensus       165 ------------------------------~~~~~y~~sKaal~~~~~sla~el~~----~~i~v~~v~pG~v~t~~~~~  210 (270)
                                                    .....|++||++++.|+++++.|+.+    .||+|++|+||+++|+|...
T Consensus       158 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~  237 (276)
T 1wma_A          158 RSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP  237 (276)
T ss_dssp             HCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT
T ss_pred             cccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc
Confidence                                          01278999999999999999999988    79999999999999998643


Q ss_pred             ccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCC--CCCccCcEEeecCC
Q 024230          211 LLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA--ASYITGQTVCIDGG  261 (270)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~--~~~~~G~~i~vdgG  261 (270)
                                       .+..+|+|+++.++||++..  .++++|+.+. +++
T Consensus       238 -----------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~-~~~  272 (276)
T 1wma_A          238 -----------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS-EKR  272 (276)
T ss_dssp             -----------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE-TTE
T ss_pred             -----------------cccCChhHhhhhHhhhhcCcccccccCceEec-cCc
Confidence                             23568999999999999854  4699999987 544

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=8.2e-37  Score=261.86  Aligned_cols=219  Identities=21%  Similarity=0.241  Sum_probs=190.4

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCC-eEEEEEccCCCHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGL-KVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      ..+++||+++||||++|||++++++|+++|++|++++|+++.+++..+++...+. ++.++.+|++|.++++++++++.+
T Consensus        23 ~~~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  102 (286)
T 1xu9_A           23 PEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGK  102 (286)
T ss_dssp             GGGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hhhcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHH
Confidence            3568999999999999999999999999999999999999998888887776654 789999999999999999999998


Q ss_pred             HcCCcccEEEEC-CCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhh
Q 024230           94 LFNGKLNIFVNN-VGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSA  172 (270)
Q Consensus        94 ~~~~~id~li~~-ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~  172 (270)
                      .+ +++|++||| +|... .++.+.+.+++++.+++|+.+++.++++++|.|+++ .|+||++||..+..+.++...|++
T Consensus       103 ~~-g~iD~li~naag~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~a  179 (286)
T 1xu9_A          103 LM-GGLDMLILNHITNTS-LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSA  179 (286)
T ss_dssp             HH-TSCSEEEECCCCCCC-CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCCTTCHHHHH
T ss_pred             Hc-CCCCEEEECCccCCC-CccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC-CCEEEEECCcccccCCCCccHHHH
Confidence            88 799999999 56543 455667899999999999999999999999999765 489999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHH--ccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCC
Q 024230          173 TKGAMNQLAKNLACEW--AKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP  246 (270)
Q Consensus       173 sKaal~~~~~sla~el--~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (270)
                      ||+++++|+++++.|+  ...||+++.|+||+++|++....... .         ......+|+|+|+.+++.+..
T Consensus       180 sK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~-~---------~~~~~~~~~~vA~~i~~~~~~  245 (286)
T 1xu9_A          180 SKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSG-I---------VHMQAAPKEECALEIIKGGAL  245 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCG-G---------GGGGCBCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhccc-c---------ccCCCCCHHHHHHHHHHHHhc
Confidence            9999999999999999  57899999999999999875432111 0         011346899999999988854

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=100.00  E-value=3.6e-37  Score=309.88  Aligned_cols=243  Identities=20%  Similarity=0.220  Sum_probs=204.2

Q ss_pred             ccCCCCCCEEEEecCCCc-HHHHHHHHHHHCCCeEEEe-eCChhHHHHHHHHHHh----cCCeEEEEEccCCCHHHHHHH
Q 024230           14 NRWSLQGMTALVTGGTKG-LGLAVVEELSMLGATVHTC-SRTETELNECIHHLQM----KGLKVTGSVCDVSSRPQRQTL   87 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~g-iG~~la~~l~~~G~~v~l~-~r~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~   87 (270)
                      ..++++||++|||||++| ||+++|++|+++|++|+++ +|+.+.+++..+++..    .+.++.++.+|++|.++++++
T Consensus       669 ~~m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~al  748 (1887)
T 2uv8_A          669 NGVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEAL  748 (1887)
T ss_dssp             TCBCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHH
T ss_pred             ccCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHH
Confidence            356799999999999998 9999999999999999998 6777777666666532    267899999999999999999


Q ss_pred             HHHHHHH-----cCC-cccEEEECCCCCCCC-CCCCCC--HHHHHHHHHHhhHHHHHHHHHH--HHHHHhcCCcEEEEec
Q 024230           88 INTVSSL-----FNG-KLNIFVNNVGTSVLK-PTLEYN--AEDFSLVMSTNFESAFHLCQLA--HPLLRASGAASIVLMS  156 (270)
Q Consensus        88 ~~~i~~~-----~~~-~id~li~~ag~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~m~~~~~g~ii~is  156 (270)
                      ++++.+.     + + ++|+||||||+.... ++.+.+  .++|++++++|+.+++.+++.+  .|.|.+++.|+||++|
T Consensus       749 v~~i~~~~~~~G~-G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnIS  827 (1887)
T 2uv8_A          749 IEFIYDTEKNGGL-GWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMS  827 (1887)
T ss_dssp             HHHHHSCTTTTSC-CCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEEC
T ss_pred             HHHHHHhcccccc-CCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEc
Confidence            9999887     5 5 899999999998777 888888  8999999999999999999998  7888777678999999


Q ss_pred             CccccccCCCChhhhhhHHHHHHH-HHHHHHHHccCCceEEEEecCccc-CCCCccccCChhhHHHHhhcCCCCCCCChH
Q 024230          157 SALGIVSANVGTVYSATKGAMNQL-AKNLACEWAKDNIRTNSVAPWYIR-TPFTEPLLGNGKFVDEVKSRTPMGRLGEPK  234 (270)
Q Consensus       157 s~~~~~~~~~~~~y~~sKaal~~~-~~sla~el~~~~i~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (270)
                      |..+..+  +...|++||+++++| ++.++.++++. |+||+|+||+++ |+|....   . .........+. +..+|+
T Consensus       828 S~ag~~g--g~~aYaASKAAL~~Lttr~lA~ela~~-IrVNaV~PG~V~tT~m~~~~---~-~~~~~~~~~pl-r~~sPE  899 (1887)
T 2uv8_A          828 PNHGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSAN---N-IIAEGIEKMGV-RTFSQK  899 (1887)
T ss_dssp             SCTTCSS--CBTTHHHHHHHGGGHHHHHHHSSCTTT-EEEEEEEECCEECC-----C---C-TTHHHHHTTSC-CCEEHH
T ss_pred             ChHhccC--CCchHHHHHHHHHHHHHHHHHHHhCCC-eEEEEEEecccccccccccc---h-hHHHHHHhcCC-CCCCHH
Confidence            9998877  678899999999999 99999999988 999999999999 7886541   1 11222233444 566999


Q ss_pred             hHHHHHHHHhCCC-CCCccCcEEeec--CCcccc
Q 024230          235 EVSSLVAFLCMPA-ASYITGQTVCID--GGFTVN  265 (270)
Q Consensus       235 dva~~~~~l~s~~-~~~~~G~~i~vd--gG~~~~  265 (270)
                      |+|+.++||+++. ..++||+.+.+|  ||+...
T Consensus       900 EVA~avlfLaSd~~as~iTGq~I~VDVDGG~~~~  933 (1887)
T 2uv8_A          900 EMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFV  933 (1887)
T ss_dssp             HHHHHHHGGGSHHHHHHHHHSCEEEEESCSTTTS
T ss_pred             HHHHHHHHHhCCCccccccCcEEEEECCCCeecc
Confidence            9999999999987 789999999875  998654

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1e-37  Score=305.24  Aligned_cols=244  Identities=19%  Similarity=0.215  Sum_probs=205.6

Q ss_pred             cccCCCCCCEEEEecCCCc-HHHHHHHHHHHCCCeEEEe-eCChhHHHHHHHHHHh----cCCeEEEEEccCCCHHHHHH
Q 024230           13 QNRWSLQGMTALVTGGTKG-LGLAVVEELSMLGATVHTC-SRTETELNECIHHLQM----KGLKVTGSVCDVSSRPQRQT   86 (270)
Q Consensus        13 ~~~~~l~gk~vlItG~s~g-iG~~la~~l~~~G~~v~l~-~r~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~   86 (270)
                      .+.++++||++|||||++| ||+++|++|+++|++|+++ +|+.+.+++..+++..    .+.++.++.+|++|.+++++
T Consensus       469 ~~~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVea  548 (1688)
T 2pff_A          469 XXXVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEA  548 (1688)
T ss_dssp             SSCCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHH
T ss_pred             ccccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHH
Confidence            3457899999999999998 9999999999999999998 6776666666565532    25689999999999999999


Q ss_pred             HHHHHHHH-----cCC-cccEEEECCCCCCCC-CCCCCC--HHHHHHHHHHhhHHHHHHHHHH--HHHHHhcCCcEEEEe
Q 024230           87 LINTVSSL-----FNG-KLNIFVNNVGTSVLK-PTLEYN--AEDFSLVMSTNFESAFHLCQLA--HPLLRASGAASIVLM  155 (270)
Q Consensus        87 ~~~~i~~~-----~~~-~id~li~~ag~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~m~~~~~g~ii~i  155 (270)
                      +++++.+.     + + ++|+||||||+.... ++.+.+  .++|++++++|+.+++.+++.+  .|.|.+++.|+||++
T Consensus       549 LVe~I~e~~~~~Gf-G~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnI  627 (1688)
T 2pff_A          549 LIEFIYDTEKNGGL-GWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPM  627 (1688)
T ss_dssp             HHHHHHSCTTSSSC-CCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCC
T ss_pred             HHHHHHHhcccccc-CCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEE
Confidence            99999887     6 6 899999999998777 888888  9999999999999999999999  888887777899999


Q ss_pred             cCccccccCCCChhhhhhHHHHHHH-HHHHHHHHccCCceEEEEecCccc-CCCCccccCChhhHHHHhhcCCCCCCCCh
Q 024230          156 SSALGIVSANVGTVYSATKGAMNQL-AKNLACEWAKDNIRTNSVAPWYIR-TPFTEPLLGNGKFVDEVKSRTPMGRLGEP  233 (270)
Q Consensus       156 ss~~~~~~~~~~~~y~~sKaal~~~-~~sla~el~~~~i~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (270)
                      ||..+..+  +...|++||+|+++| ++.++.++++. |+||+|+||+++ |+|....    ..........+. +..+|
T Consensus       628 SSiAG~~G--g~saYaASKAAL~aLttrsLAeEla~~-IRVNaVaPG~V~TT~M~~~~----e~~~~~l~~ipl-R~~sP  699 (1688)
T 2pff_A          628 SPNHGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSAN----NIIAEGIEKMGV-RTFSQ  699 (1688)
T ss_dssp             CSCTTTSS--CBTTHHHHHHHHTHHHHHTTTSSCTTT-EECCCCCCCCCCCCSSSCTT----TTCSTTTSSSSC-CCCCC
T ss_pred             EChHhccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEECcCcCCcccCCc----hHHHHHHHhCCC-CCCCH
Confidence            99998876  677899999999999 88888888887 999999999999 7876431    111111122333 55699


Q ss_pred             HhHHHHHHHHhCCC-CCCccCcEEeec--CCcccc
Q 024230          234 KEVSSLVAFLCMPA-ASYITGQTVCID--GGFTVN  265 (270)
Q Consensus       234 ~dva~~~~~l~s~~-~~~~~G~~i~vd--gG~~~~  265 (270)
                      +|+|++++||+++. .++++|+.+.+|  ||+...
T Consensus       700 EEVA~aIlFLaSd~sAs~ITGq~I~VDVDGG~~~~  734 (1688)
T 2pff_A          700 KEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFV  734 (1688)
T ss_dssp             CTTHHHHHHHTSTTHHHHHTTSCCCCCCSCSGGGS
T ss_pred             HHHHHHHHHHhCCCccccccCcEEEEEcCCCeeec
Confidence            99999999999987 789999999876  998654

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=100.00  E-value=4.2e-36  Score=301.62  Aligned_cols=243  Identities=20%  Similarity=0.229  Sum_probs=203.4

Q ss_pred             ccCCCCCCEEEEecCCCc-HHHHHHHHHHHCCCeEEEee-CChhHHHHHHHHHH----hcCCeEEEEEccCCCHHHHHHH
Q 024230           14 NRWSLQGMTALVTGGTKG-LGLAVVEELSMLGATVHTCS-RTETELNECIHHLQ----MKGLKVTGSVCDVSSRPQRQTL   87 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~g-iG~~la~~l~~~G~~v~l~~-r~~~~~~~~~~~~~----~~~~~~~~~~~D~~~~~~~~~~   87 (270)
                      ..|+++||++|||||++| ||+++|++|+++|++|++++ |+.+.+++..+++.    ..+.++.++.||++|.++++++
T Consensus       646 ~~m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~al  725 (1878)
T 2uv9_A          646 SGLTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEAL  725 (1878)
T ss_dssp             HCBCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHH
T ss_pred             cCCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHH
Confidence            346899999999999999 99999999999999999995 66666655554442    2367899999999999999999


Q ss_pred             HHHHHHH---cCC-cccEEEECCCCCCCC-CCCCCC--HHHHHHHHHHhhHHHHHHHHH--HHHHHHhcCCcEEEEecCc
Q 024230           88 INTVSSL---FNG-KLNIFVNNVGTSVLK-PTLEYN--AEDFSLVMSTNFESAFHLCQL--AHPLLRASGAASIVLMSSA  158 (270)
Q Consensus        88 ~~~i~~~---~~~-~id~li~~ag~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~--~~~~m~~~~~g~ii~iss~  158 (270)
                      ++++.+.   + + ++|+||||||+.... ++.+.+  .++|++++++|+.+++.+++.  ++|.|.+++.|+||++||.
T Consensus       726 v~~i~~~~~~~-G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~  804 (1878)
T 2uv9_A          726 VNYIYDTKNGL-GWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPN  804 (1878)
T ss_dssp             HHHHHCSSSSC-CCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSC
T ss_pred             HHHHHHhhccc-CCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcch
Confidence            9999887   7 6 899999999998776 888998  899999999999999999977  7788877766899999999


Q ss_pred             cccccCCCChhhhhhHHHHHHHHHHHHHH-HccCCceEEEEecCccc-CCCCccccCChhhHHHHhhcCCCCCCCChHhH
Q 024230          159 LGIVSANVGTVYSATKGAMNQLAKNLACE-WAKDNIRTNSVAPWYIR-TPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEV  236 (270)
Q Consensus       159 ~~~~~~~~~~~y~~sKaal~~~~~sla~e-l~~~~i~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  236 (270)
                      .+..+  +...|++||+++++|++.++.+ +++. |+||+|+||+++ |+|....    ..........+. +..+|+|+
T Consensus       805 ag~~g--g~~aYaASKAAL~aLt~~laAeEla~~-IrVNaVaPG~V~gT~m~~~~----~~~~~~~~~~pl-r~~sPeEV  876 (1878)
T 2uv9_A          805 HGTFG--NDGLYSESKLALETLFNRWYSESWGNY-LTICGAVIGWTRGTGLMSAN----NLVAEGVEKLGV-RTFSQQEM  876 (1878)
T ss_dssp             SSSSS--CCSSHHHHHHHHTTHHHHHHHSTTTTT-EEEEEEEECCBCCTTSCSHH----HHTHHHHHTTTC-CCBCHHHH
T ss_pred             hhccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEecceecCcccccc----hhhHHHHHhcCC-CCCCHHHH
Confidence            98877  4678999999999999877654 7776 999999999999 9986541    111222233444 55699999


Q ss_pred             HHHHHHHhCCCC-CCccCcEEee--cCCcccc
Q 024230          237 SSLVAFLCMPAA-SYITGQTVCI--DGGFTVN  265 (270)
Q Consensus       237 a~~~~~l~s~~~-~~~~G~~i~v--dgG~~~~  265 (270)
                      ++.++||+++.. +++||+.+.+  |||+...
T Consensus       877 A~avlfLaSd~a~s~iTGq~I~VDVDGG~~~~  908 (1878)
T 2uv9_A          877 AFNLLGLMAPAIVNLCQSDPVFADLNGGLQFI  908 (1878)
T ss_dssp             HHHHHHHHSHHHHHHHTTSCEEEEESCSGGGC
T ss_pred             HHHHHHHhCCcccccccCcEEEEEcCCCcccc
Confidence            999999999876 8999999987  5998754

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=100.00  E-value=2.4e-35  Score=239.94  Aligned_cols=200  Identities=21%  Similarity=0.252  Sum_probs=177.0

Q ss_pred             CC-EEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           20 GM-TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        20 gk-~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      || +++||||+|+||++++++|+ +|++|++++|+++                 .+.+|++++++++++++++     ++
T Consensus         2 ~kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-----------------~~~~D~~~~~~~~~~~~~~-----~~   58 (202)
T 3d7l_A            2 NAMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-----------------DVTVDITNIDSIKKMYEQV-----GK   58 (202)
T ss_dssp             CSCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-----------------SEECCTTCHHHHHHHHHHH-----CC
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-----------------ceeeecCCHHHHHHHHHHh-----CC
Confidence            45 79999999999999999999 9999999999864                 3679999999999988764     78


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHHH
Q 024230           99 LNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMN  178 (270)
Q Consensus        99 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal~  178 (270)
                      +|++|||||.....++.+.+.++|++.+++|+.+++.+++++.|.|++  .++||++||..+..+.+....|+++|++++
T Consensus        59 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~  136 (202)
T 3d7l_A           59 VDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND--KGSFTLTTGIMMEDPIVQGASAAMANGAVT  136 (202)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEE--EEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhcc--CCEEEEEcchhhcCCCCccHHHHHHHHHHH
Confidence            999999999887778888999999999999999999999999998854  389999999999999899999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEEee
Q 024230          179 QLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCI  258 (270)
Q Consensus       179 ~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~v  258 (270)
                      .++++++.|+ +.||+++.|+||++.|++..           .....+..+..+++|++++++++++   ++.+|+++++
T Consensus       137 ~~~~~~~~e~-~~gi~v~~v~pg~v~~~~~~-----------~~~~~~~~~~~~~~dva~~~~~~~~---~~~~G~~~~v  201 (202)
T 3d7l_A          137 AFAKSAAIEM-PRGIRINTVSPNVLEESWDK-----------LEPFFEGFLPVPAAKVARAFEKSVF---GAQTGESYQV  201 (202)
T ss_dssp             HHHHHHTTSC-STTCEEEEEEECCBGGGHHH-----------HGGGSTTCCCBCHHHHHHHHHHHHH---SCCCSCEEEE
T ss_pred             HHHHHHHHHc-cCCeEEEEEecCccCCchhh-----------hhhhccccCCCCHHHHHHHHHHhhh---ccccCceEec
Confidence            9999999999 78999999999999997532           1122345667899999999998883   5689999998


Q ss_pred             c
Q 024230          259 D  259 (270)
Q Consensus       259 d  259 (270)
                      |
T Consensus       202 d  202 (202)
T 3d7l_A          202 Y  202 (202)
T ss_dssp             C
T ss_pred             C
Confidence            7

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=100.00  E-value=1.6e-35  Score=248.73  Aligned_cols=220  Identities=26%  Similarity=0.399  Sum_probs=182.7

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      |+||||||+|+||++++++|+++|++|++++|+++..+.             .+.+|+++.++++++++++    .+++|
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------------~~~~D~~~~~~~~~~~~~~----~~~~d   64 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA-------------DLSTPGGRETAVAAVLDRC----GGVLD   64 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------------CTTSHHHHHHHHHHHHHHH----TTCCS
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc-------------cccCCcccHHHHHHHHHHc----CCCcc
Confidence            689999999999999999999999999999998764321             1568999999988888754    26899


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC----------------
Q 024230          101 IFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA----------------  164 (270)
Q Consensus       101 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~----------------  164 (270)
                      ++|||||....       .+++++.+++|+.+++++++++.|.|++.+.++||++||..++.+.                
T Consensus        65 ~vi~~Ag~~~~-------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  137 (255)
T 2dkn_A           65 GLVCCAGVGVT-------AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEA  137 (255)
T ss_dssp             EEEECCCCCTT-------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHH
T ss_pred             EEEECCCCCCc-------chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchh
Confidence            99999997541       1237889999999999999999999988777899999999887654                


Q ss_pred             ----------CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcC--CCCCCCC
Q 024230          165 ----------NVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRT--PMGRLGE  232 (270)
Q Consensus       165 ----------~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~  232 (270)
                                +....|++||++++.+++.++.++.+.||+++.++||++.|++.......... .......  +.+++.+
T Consensus       138 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  216 (255)
T 2dkn_A          138 RAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRY-GESTRRFVAPLGRGSE  216 (255)
T ss_dssp             HHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTTT-HHHHHSCCCTTSSCBC
T ss_pred             hhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchhh-HHHHHHHHHHhcCCCC
Confidence                      45678999999999999999999999999999999999999876543111111 1222222  6678899


Q ss_pred             hHhHHHHHHHHhCCCCCCccCcEEeecCCcccc
Q 024230          233 PKEVSSLVAFLCMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       233 ~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                      ++|+++++++++++.+.+++|+++.+|||+.+.
T Consensus       217 ~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~  249 (255)
T 2dkn_A          217 PREVAEAIAFLLGPQASFIHGSVLFVDGGMDAL  249 (255)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHH
T ss_pred             HHHHHHHHHHHhCCCcccceeeEEEecCCeEee
Confidence            999999999999887778999999999998764

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=100.00  E-value=4.8e-34  Score=232.83  Aligned_cols=200  Identities=20%  Similarity=0.200  Sum_probs=173.0

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      |+++||||+|+||++++++|+++  +|++++|+++..++..+++.   .  .++.+|++|++++++++++    + +++|
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~---~--~~~~~D~~~~~~~~~~~~~----~-~~id   68 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVG---A--RALPADLADELEAKALLEE----A-GPLD   68 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHT---C--EECCCCTTSHHHHHHHHHH----H-CSEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhcc---C--cEEEeeCCCHHHHHHHHHh----c-CCCC
Confidence            68999999999999999999999  99999999988877666553   1  7788999999999999876    4 7999


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHHHHH
Q 024230          101 IFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQL  180 (270)
Q Consensus       101 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal~~~  180 (270)
                      ++|||||.....++.+.+.+++++.+++|+.+++.+++++    .+++.++||++||..++.+.++...|++||++++.+
T Consensus        69 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~  144 (207)
T 2yut_A           69 LLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAY  144 (207)
T ss_dssp             EEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHC----CEEEEEEEEEECCCHHHHSSTTBHHHHHHHHHHHHH
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH----HhcCCcEEEEEcChhhccCCCCcchHHHHHHHHHHH
Confidence            9999999988888888999999999999999999999998    344568999999999999988999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCC
Q 024230          181 AKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAA  248 (270)
Q Consensus       181 ~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  248 (270)
                      +++++.|++++||+++.++||++.|++...            ...+.++..+++|++++++++++...
T Consensus       145 ~~~~~~~~~~~gi~v~~v~pg~v~t~~~~~------------~~~~~~~~~~~~dva~~~~~~~~~~~  200 (207)
T 2yut_A          145 LEAARKELLREGVHLVLVRLPAVATGLWAP------------LGGPPKGALSPEEAARKVLEGLFREP  200 (207)
T ss_dssp             HHHHHHHHHTTTCEEEEECCCCBCSGGGGG------------GTSCCTTCBCHHHHHHHHHHHHC--C
T ss_pred             HHHHHHHHhhhCCEEEEEecCcccCCCccc------------cCCCCCCCCCHHHHHHHHHHHHhCCC
Confidence            999999999999999999999999987321            12345678899999999999997654

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=100.00  E-value=5.2e-33  Score=256.25  Aligned_cols=218  Identities=20%  Similarity=0.143  Sum_probs=185.1

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCe-EEEe-eCCh-------------hHHHHHHHHHHhcCCeEEEEEccCCCHHH
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGAT-VHTC-SRTE-------------TELNECIHHLQMKGLKVTGSVCDVSSRPQ   83 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~-v~l~-~r~~-------------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   83 (270)
                      ++|++|||||++|||.++|++|+++|++ |+++ +|+.             +..++..+++...+.++.++.||++|.++
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~  329 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEA  329 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHH
Confidence            6899999999999999999999999997 7777 8983             55667778888888999999999999999


Q ss_pred             HHHHHHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCccccc
Q 024230           84 RQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIV  162 (270)
Q Consensus        84 ~~~~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~~~~  162 (270)
                      ++++++++. .+ +++|++|||||+...+++.+.+.++|++++++|+.|++++.+.+.+.|++++ .++||++||..+..
T Consensus       330 v~~~~~~i~-~~-g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~  407 (525)
T 3qp9_A          330 AARLLAGVS-DA-HPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIW  407 (525)
T ss_dssp             HHHHHHTSC-TT-SCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTT
T ss_pred             HHHHHHHHH-hc-CCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcC
Confidence            999999988 56 7999999999999889999999999999999999999999999999998776 78999999999999


Q ss_pred             cCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHH
Q 024230          163 SANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAF  242 (270)
Q Consensus       163 ~~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  242 (270)
                      +.+++..|++||+++++|+    .++.+.||++++|+||+++|+|....    .....+...  -....+|+++++.+.+
T Consensus       408 g~~g~~~YaaaKa~l~~lA----~~~~~~gi~v~sI~pG~~~tgm~~~~----~~~~~~~~~--g~~~l~pee~a~~l~~  477 (525)
T 3qp9_A          408 GGAGQGAYAAGTAFLDALA----GQHRADGPTVTSVAWSPWEGSRVTEG----ATGERLRRL--GLRPLAPATALTALDT  477 (525)
T ss_dssp             CCTTCHHHHHHHHHHHHHH----TSCCSSCCEEEEEEECCBTTSGGGSS----HHHHHHHHT--TBCCBCHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHH----HHHHhCCCCEEEEECCccccccccch----hhHHHHHhc--CCCCCCHHHHHHHHHH
Confidence            9999999999999999885    46677899999999999999887431    222222221  1245689999999999


Q ss_pred             HhCCCC
Q 024230          243 LCMPAA  248 (270)
Q Consensus       243 l~s~~~  248 (270)
                      +++...
T Consensus       478 ~l~~~~  483 (525)
T 3qp9_A          478 ALGHGD  483 (525)
T ss_dssp             HHHHTC
T ss_pred             HHhCCC
Confidence            997643

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.97  E-value=1.4e-31  Score=280.47  Aligned_cols=239  Identities=17%  Similarity=0.204  Sum_probs=183.9

Q ss_pred             CCCCCEEEEecCCCc-HHHHHHHHHHHCCCeEEEeeCChhH-----HHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Q 024230           17 SLQGMTALVTGGTKG-LGLAVVEELSMLGATVHTCSRTETE-----LNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINT   90 (270)
Q Consensus        17 ~l~gk~vlItG~s~g-iG~~la~~l~~~G~~v~l~~r~~~~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   90 (270)
                      .|+||++|||||++| ||+++|+.|+++|++|++++|+.+.     ++++.+++...+.++..+.+|+++++++++++++
T Consensus      2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~ 2212 (3089)
T 3zen_D         2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEW 2212 (3089)
T ss_dssp             CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHH
Confidence            489999999999999 9999999999999999999998776     5666666666677899999999999999999999


Q ss_pred             HHH----HcCCcccEEEECCCC----CC-CCCCCCCCHHHH----HHHHHHhhHHHHHHHHHHHHHHHhcCCc----EEE
Q 024230           91 VSS----LFNGKLNIFVNNVGT----SV-LKPTLEYNAEDF----SLVMSTNFESAFHLCQLAHPLLRASGAA----SIV  153 (270)
Q Consensus        91 i~~----~~~~~id~li~~ag~----~~-~~~~~~~~~~~~----~~~~~~n~~~~~~l~~~~~~~m~~~~~g----~ii  153 (270)
                      +.+    .+ |++|+||||||.    .. .....+.+.++|    +..+++|+.+++.+++.+.|.|.+++.+    .++
T Consensus      2213 i~~~~~~~f-G~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~ 2291 (3089)
T 3zen_D         2213 VGTEQTESL-GPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVL 2291 (3089)
T ss_dssp             HTSCCEEEE-SSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEE
T ss_pred             HHhhhhhhc-CCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEE
Confidence            988    77 899999999997    11 122233333334    4559999999999999999999876542    233


Q ss_pred             EecCccccccCCCChhhhhhHHHHHHHHHHHHHH--HccCCceEEEEecCccc-CCCCccccCChhhHHHHhhcCCCCCC
Q 024230          154 LMSSALGIVSANVGTVYSATKGAMNQLAKNLACE--WAKDNIRTNSVAPWYIR-TPFTEPLLGNGKFVDEVKSRTPMGRL  230 (270)
Q Consensus       154 ~iss~~~~~~~~~~~~y~~sKaal~~~~~sla~e--l~~~~i~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~  230 (270)
                      +.++..+.  .++...|++||+|+++|+|+++.|  +++ +|+||+++||+++ |++....   ... .+.....+. +.
T Consensus      2292 ~~ss~~g~--~g~~~aYsASKaAl~~LtrslA~E~~~a~-~IrVn~v~PG~v~tT~l~~~~---~~~-~~~~~~~~~-r~ 2363 (3089)
T 3zen_D         2292 PGSPNRGM--FGGDGAYGEAKSALDALENRWSAEKSWAE-RVSLAHALIGWTKGTGLMGQN---DAI-VSAVEEAGV-TT 2363 (3089)
T ss_dssp             EECSSTTS--CSSCSSHHHHGGGHHHHHHHHHHCSTTTT-TEEEEEEECCCEECSTTTTTT---TTT-HHHHGGGSC-BC
T ss_pred             ECCccccc--CCCchHHHHHHHHHHHHHHHHHhccccCC-CeEEEEEeecccCCCcccccc---hhH-HHHHHhcCC-CC
Confidence            33433332  234568999999999999999999  665 5999999999998 6665432   111 222222333 34


Q ss_pred             CChHhHHHHHHHHhCCCCCCc-cCcEEeec--CCccc
Q 024230          231 GEPKEVSSLVAFLCMPAASYI-TGQTVCID--GGFTV  264 (270)
Q Consensus       231 ~~~~dva~~~~~l~s~~~~~~-~G~~i~vd--gG~~~  264 (270)
                      .+|+|||.+++||+|++++++ +|+.+.+|  ||+.-
T Consensus      2364 ~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~ 2400 (3089)
T 3zen_D         2364 YTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGD 2400 (3089)
T ss_dssp             EEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSS
T ss_pred             CCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCc
Confidence            489999999999999876654 55666666  99854

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.97  E-value=6e-30  Score=233.61  Aligned_cols=214  Identities=21%  Similarity=0.220  Sum_probs=176.4

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChh---HHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTET---ELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      +|++|||||++|||+++|++|+++|+ +|++++|+..   ..+++.+++...+.++.++.||++|+++++++++++.+. 
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~-  317 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED-  317 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT-
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh-
Confidence            59999999999999999999999999 7999999743   456777888888899999999999999999999988665 


Q ss_pred             CCcccEEEECCCCC-CCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           96 NGKLNIFVNNVGTS-VLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        96 ~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                       +++|++|||||+. ...++.+.+.++|++++++|+.+++++.+.+.+    ...++||++||..+..+.+++..|++||
T Consensus       318 -g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~----~~~~~iV~~SS~a~~~g~~g~~~YaAaK  392 (496)
T 3mje_A          318 -APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTAD----LDLDAFVLFSSGAAVWGSGGQPGYAAAN  392 (496)
T ss_dssp             -SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTT----SCCSEEEEEEEHHHHTTCTTCHHHHHHH
T ss_pred             -CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhc----cCCCEEEEEeChHhcCCCCCcHHHHHHH
Confidence             5899999999997 788899999999999999999999999888744    4568999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCC
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAA  248 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  248 (270)
                      +++++|++.+    .+.||++++|+||++.+.....-   ....+.+....  -...+|+++++.+.+++....
T Consensus       393 a~ldala~~~----~~~Gi~v~sV~pG~w~~~gm~~~---~~~~~~l~~~g--~~~l~pe~~~~~l~~~l~~~~  457 (496)
T 3mje_A          393 AYLDALAEHR----RSLGLTASSVAWGTWGEVGMATD---PEVHDRLVRQG--VLAMEPEHALGALDQMLENDD  457 (496)
T ss_dssp             HHHHHHHHHH----HHTTCCCEEEEECEESSSCC---------CHHHHHTT--EEEECHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHH----HhcCCeEEEEECCcccCCccccC---hHHHHHHHhcC--CCCCCHHHHHHHHHHHHcCCC
Confidence            9999988754    45799999999998876543221   11112222111  123589999999999986543

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.97  E-value=6.2e-30  Score=245.96  Aligned_cols=219  Identities=23%  Similarity=0.247  Sum_probs=179.5

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHH-HCCC-eEEEeeCC---hhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           19 QGMTALVTGGTKGLGLAVVEELS-MLGA-TVHTCSRT---ETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~-~~G~-~v~l~~r~---~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      .+|+++||||++|||+++|++|+ ++|+ +|++++|+   .+..++..++++..|.++.++.||++|+++++++++++.+
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~  608 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD  608 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            68999999999999999999999 7999 59999999   4556778888888899999999999999999999999876


Q ss_pred             HcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhh
Q 024230           94 LFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                      .+  ++|++|||||+....++.+++.++|++.+++|+.|++++.+++.|.|      +||++||.++..+.+++..|++|
T Consensus       609 ~~--~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l------~iV~~SS~ag~~g~~g~~~YaAa  680 (795)
T 3slk_A          609 EH--PLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV------ALVLFSSVSGVLGSGGQGNYAAA  680 (795)
T ss_dssp             TS--CEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS------EEEEEEETHHHHTCSSCHHHHHH
T ss_pred             hC--CCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC------EEEEEccHHhcCCCCCCHHHHHH
Confidence            53  89999999999999999999999999999999999999999997766      79999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCcc
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT  252 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  252 (270)
                      |+    |+++++.++.+.||++++|+||++.|.+..... .....+.+ .+.... ..++++....+.+.+......+.
T Consensus       681 ka----~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~~~-~~~~~~~~-~~~g~~-~l~~~e~~~~~~~~l~~~~~~~~  752 (795)
T 3slk_A          681 NS----FLDALAQQRQSRGLPTRSLAWGPWAEHGMASTL-REAEQDRL-ARSGLL-PISTEEGLSQFDAACGGAHTVVA  752 (795)
T ss_dssp             HH----HHHHHHHHHHHTTCCEEEEEECCCSCCCHHHHH-HHHHHHHH-HHTTBC-CCCHHHHHHHHHHHHTSSCSSCC
T ss_pred             HH----HHHHHHHHHHHcCCeEEEEECCeECcchhhccc-cHHHHHHH-HhcCCC-CCCHHHHHHHHHHHHhCCCcEEE
Confidence            95    666677777888999999999999987542211 01111122 222333 34667777777666654433333

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.96  E-value=4e-29  Score=207.95  Aligned_cols=214  Identities=17%  Similarity=0.137  Sum_probs=159.3

Q ss_pred             CcccccccccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeE-EEEEccCCCHHHH
Q 024230            6 QTESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKV-TGSVCDVSSRPQR   84 (270)
Q Consensus         6 ~~~~~~~~~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~   84 (270)
                      +++........+|+||+|+||||+|+||++++++|+++|++|++++|+++..+.+..      ..+ .++.+|++  +  
T Consensus         7 ~~~~~~~~~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~------~~~~~~~~~Dl~--~--   76 (236)
T 3e8x_A            7 HHHHSSGRENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE------RGASDIVVANLE--E--   76 (236)
T ss_dssp             --------------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH------TTCSEEEECCTT--S--
T ss_pred             cccccccccccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh------CCCceEEEcccH--H--
Confidence            344444455678999999999999999999999999999999999999987665432      246 78899998  2  


Q ss_pred             HHHHHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC
Q 024230           85 QTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA  164 (270)
Q Consensus        85 ~~~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~  164 (270)
                           .+.+.+ +++|++|||||....        +++++.+++|+.+++++++++    ++.+.++||++||..+..+.
T Consensus        77 -----~~~~~~-~~~D~vi~~ag~~~~--------~~~~~~~~~n~~~~~~l~~a~----~~~~~~~iv~~SS~~~~~~~  138 (236)
T 3e8x_A           77 -----DFSHAF-ASIDAVVFAAGSGPH--------TGADKTILIDLWGAIKTIQEA----EKRGIKRFIMVSSVGTVDPD  138 (236)
T ss_dssp             -----CCGGGG-TTCSEEEECCCCCTT--------SCHHHHHHTTTHHHHHHHHHH----HHHTCCEEEEECCTTCSCGG
T ss_pred             -----HHHHHH-cCCCEEEECCCCCCC--------CCccccchhhHHHHHHHHHHH----HHcCCCEEEEEecCCCCCCC
Confidence                 333444 689999999997532        347889999999999999988    44456899999998877664


Q ss_pred             ---CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHH
Q 024230          165 ---NVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVA  241 (270)
Q Consensus       165 ---~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  241 (270)
                         +....|+.+|++++.+.+       ..|++++.+.||++.+++........      ...........++|+|++++
T Consensus       139 ~~~~~~~~Y~~sK~~~e~~~~-------~~gi~~~~lrpg~v~~~~~~~~~~~~------~~~~~~~~~i~~~Dva~~~~  205 (236)
T 3e8x_A          139 QGPMNMRHYLVAKRLADDELK-------RSSLDYTIVRPGPLSNEESTGKVTVS------PHFSEITRSITRHDVAKVIA  205 (236)
T ss_dssp             GSCGGGHHHHHHHHHHHHHHH-------HSSSEEEEEEECSEECSCCCSEEEEE------SSCSCCCCCEEHHHHHHHHH
T ss_pred             CChhhhhhHHHHHHHHHHHHH-------HCCCCEEEEeCCcccCCCCCCeEEec------cCCCcccCcEeHHHHHHHHH
Confidence               467789999999999876       46899999999999998654322110      01112345678999999999


Q ss_pred             HHhCCCCCCccCcEEeecCCc
Q 024230          242 FLCMPAASYITGQTVCIDGGF  262 (270)
Q Consensus       242 ~l~s~~~~~~~G~~i~vdgG~  262 (270)
                      ++++...  .+|+++.+++|.
T Consensus       206 ~~~~~~~--~~g~~~~v~~~~  224 (236)
T 3e8x_A          206 ELVDQQH--TIGKTFEVLNGD  224 (236)
T ss_dssp             HHTTCGG--GTTEEEEEEECS
T ss_pred             HHhcCcc--ccCCeEEEeCCC
Confidence            9997543  789999998884

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.96  E-value=2.7e-28  Score=223.06  Aligned_cols=212  Identities=21%  Similarity=0.163  Sum_probs=174.1

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCe-EEEeeCChh---HHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGAT-VHTCSRTET---ELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~-v~l~~r~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .+|+||||||+||||.+++++|+++|++ |++++|+.+   ..+++.+++...+.++.++.+|++|.++++++++++ ..
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i-~~  303 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI-GD  303 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS-CT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH-Hh
Confidence            6799999999999999999999999995 999999875   456677777777889999999999999999999988 44


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                      + +++|++|||||.....++.+.+.+++++++++|+.+++++.+.+.    +.+.++||++||..+..+.+++..|+++|
T Consensus       304 ~-g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~----~~~~~~~V~~SS~a~~~g~~g~~~Yaaak  378 (486)
T 2fr1_A          304 D-VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTR----ELDLTAFVLFSSFASAFGAPGLGGYAPGN  378 (486)
T ss_dssp             T-SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHT----TSCCSEEEEEEEHHHHTCCTTCTTTHHHH
T ss_pred             c-CCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhC----cCCCCEEEEEcChHhcCCCCCCHHHHHHH
Confidence            5 799999999999888888899999999999999999999998874    34568999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCC-CCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCC
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTP-FTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA  247 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (270)
                      ++++.|++.+    ...|+++++|+||++.++ |....     ....+..  .-....+++|+++.+.+++...
T Consensus       379 a~l~~la~~~----~~~gi~v~~i~pG~~~~~gm~~~~-----~~~~~~~--~g~~~i~~e~~a~~l~~~l~~~  441 (486)
T 2fr1_A          379 AYLDGLAQQR----RSDGLPATAVAWGTWAGSGMAEGP-----VADRFRR--HGVIEMPPETACRALQNALDRA  441 (486)
T ss_dssp             HHHHHHHHHH----HHTTCCCEEEEECCBC-----------------CTT--TTEECBCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHH----HhcCCeEEEEECCeeCCCcccchh-----HHHHHHh--cCCCCCCHHHHHHHHHHHHhCC
Confidence            9999887654    456999999999999876 43221     0111110  1113568999999999998754

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.96  E-value=4.5e-27  Score=215.88  Aligned_cols=209  Identities=22%  Similarity=0.205  Sum_probs=175.5

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChh---HHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTET---ELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .+|+||||||+||||.+++++|+++|+ +|++++|+..   ..++..+++...+.++.++.||++|.+++++++++    
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~----  333 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA----  333 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH----
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc----
Confidence            579999999999999999999999999 5999999874   35667777877788999999999999999998876    


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                        +++|++|||||+....++.+.+.+++++++++|+.+++++.+.+.+.   .+.++||++||..+..+.+++..|+++|
T Consensus       334 --~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~---~~~~~~V~~SS~a~~~g~~g~~~YaaaK  408 (511)
T 2z5l_A          334 --YPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADI---KGLDAFVLFSSVTGTWGNAGQGAYAAAN  408 (511)
T ss_dssp             --SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC---TTCCCEEEEEEGGGTTCCTTBHHHHHHH
T ss_pred             --CCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhc---cCCCEEEEEeCHHhcCCCCCCHHHHHHH
Confidence              68999999999988888889999999999999999999998877421   1467999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcc-cCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCC
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYI-RTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA  247 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (270)
                      ++++.|++.+    ...|+++++|+||++ +|.|.....     ...+...  .....+++|+++.+.+.+...
T Consensus       409 a~ld~la~~~----~~~gi~v~sv~pG~~~~tgm~~~~~-----~~~~~~~--g~~~l~~e~~a~~l~~al~~~  471 (511)
T 2z5l_A          409 AALDALAERR----RAAGLPATSVAWGLWGGGGMAAGAG-----EESLSRR--GLRAMDPDAAVDALLGAMGRN  471 (511)
T ss_dssp             HHHHHHHHHH----HTTTCCCEEEEECCBCSTTCCCCHH-----HHHHHHH--TBCCBCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHH----HHcCCcEEEEECCcccCCccccccc-----HHHHHhc--CCCCCCHHHHHHHHHHHHhCC
Confidence            9999999865    356999999999988 777765421     1112111  113568999999999988643

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.95  E-value=3e-27  Score=200.38  Aligned_cols=200  Identities=19%  Similarity=0.188  Sum_probs=157.7

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      |++|+||||||+|+||++++++|+++|++|++++|++....         +.++.++.+|++|.+++++++        .
T Consensus         1 m~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~--------~   63 (267)
T 3rft_A            1 MAMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA---------GPNEECVQCDLADANAVNAMV--------A   63 (267)
T ss_dssp             CCEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC---------CTTEEEEECCTTCHHHHHHHH--------T
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc---------CCCCEEEEcCCCCHHHHHHHH--------c
Confidence            35689999999999999999999999999999999876532         457889999999999988887        4


Q ss_pred             cccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccc------------cCC
Q 024230           98 KLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIV------------SAN  165 (270)
Q Consensus        98 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~------------~~~  165 (270)
                      ++|+||||||...        .++|++.+++|+.+++++++++    .+.+.++||++||..++.            +.+
T Consensus        64 ~~D~vi~~Ag~~~--------~~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~  131 (267)
T 3rft_A           64 GCDGIVHLGGISV--------EKPFEQILQGNIIGLYNLYEAA----RAHGQPRIVFASSNHTIGYYPQTERLGPDVPAR  131 (267)
T ss_dssp             TCSEEEECCSCCS--------CCCHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCC
T ss_pred             CCCEEEECCCCcC--------cCCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCC
Confidence            7899999999842        2347889999999999999999    445668999999998873            334


Q ss_pred             CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhC
Q 024230          166 VGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCM  245 (270)
Q Consensus       166 ~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (270)
                      ....|+.||++++.+++.++.++   |++++.|.||.+.+++...     ...         ..+..++|+++.+..++.
T Consensus       132 ~~~~Y~~sK~~~e~~~~~~a~~~---g~~~~~vr~~~v~~~~~~~-----~~~---------~~~~~~~d~a~~~~~~~~  194 (267)
T 3rft_A          132 PDGLYGVSKCFGENLARMYFDKF---GQETALVRIGSCTPEPNNY-----RML---------STWFSHDDFVSLIEAVFR  194 (267)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECBCSSSCCST-----THH---------HHBCCHHHHHHHHHHHHH
T ss_pred             CCChHHHHHHHHHHHHHHHHHHh---CCeEEEEEeecccCCCCCC-----Cce---------eeEEcHHHHHHHHHHHHh
Confidence            45789999999999999999885   7899999999988764322     111         113578999999998886


Q ss_pred             CCCCCccCcEEeecCCcccc
Q 024230          246 PAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       246 ~~~~~~~G~~i~vdgG~~~~  265 (270)
                      ...  ..+.++.+-++....
T Consensus       195 ~~~--~~~~~~~~~s~~~~~  212 (267)
T 3rft_A          195 APV--LGCPVVWGASANDAG  212 (267)
T ss_dssp             CSC--CCSCEEEECCCCTTC
T ss_pred             CCC--CCceEEEEeCCCCCC
Confidence            532  334455555444333

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.94  E-value=1e-25  Score=185.46  Aligned_cols=193  Identities=8%  Similarity=-0.038  Sum_probs=148.9

Q ss_pred             CEEEEecCCCcHHHHHHHHHH-HCCCeEEEeeCChh-HHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           21 MTALVTGGTKGLGLAVVEELS-MLGATVHTCSRTET-ELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~-~~G~~v~l~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      |+|+||||+|+||++++++|+ ++|++|++++|+++ .++++.    ..+.++.++.+|++|++++++++        ..
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~D~~d~~~~~~~~--------~~   73 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----IDHERVTVIEGSFQNPGXLEQAV--------TN   73 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HTSTTEEEEECCTTCHHHHHHHH--------TT
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cCCCceEEEECCCCCHHHHHHHH--------cC
Confidence            789999999999999999999 89999999999987 654432    23467889999999999988887        47


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCCh----------
Q 024230           99 LNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGT----------  168 (270)
Q Consensus        99 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~----------  168 (270)
                      +|++|||+|..                   |+.     ++.+++.|++.+.++||++||..++.+.+...          
T Consensus        74 ~d~vv~~ag~~-------------------n~~-----~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~  129 (221)
T 3r6d_A           74 AEVVFVGAMES-------------------GSD-----MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLPI  129 (221)
T ss_dssp             CSEEEESCCCC-------------------HHH-----HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSCH
T ss_pred             CCEEEEcCCCC-------------------Chh-----HHHHHHHHHhcCCCeEEEEeeceecCCCCccccccccccccc
Confidence            89999999853                   222     78888888888888999999999887666544          


Q ss_pred             hhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCC-CCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHh--C
Q 024230          169 VYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTP-FTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLC--M  245 (270)
Q Consensus       169 ~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~--s  245 (270)
                      .|+.+|.+++.+.+.       .|++++.|+||++.++ ....+....      ......+...+++|+|+.+++++  +
T Consensus       130 ~y~~~K~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~~~------~~~~~~~~~~~~~dvA~~~~~l~~~~  196 (221)
T 3r6d_A          130 SYVQGERQARNVLRE-------SNLNYTILRLTWLYNDPEXTDYELIP------EGAQFNDAQVSREAVVKAIFDILHAA  196 (221)
T ss_dssp             HHHHHHHHHHHHHHH-------SCSEEEEEEECEEECCTTCCCCEEEC------TTSCCCCCEEEHHHHHHHHHHHHTCS
T ss_pred             HHHHHHHHHHHHHHh-------CCCCEEEEechhhcCCCCCcceeecc------CCccCCCceeeHHHHHHHHHHHHHhc
Confidence            899999999988763       6899999999999887 322221100      01112234678999999999999  8


Q ss_pred             CCCCCccCcEEeecCCc
Q 024230          246 PAASYITGQTVCIDGGF  262 (270)
Q Consensus       246 ~~~~~~~G~~i~vdgG~  262 (270)
                      +...++++.+...+.+.
T Consensus       197 ~~~~~~~~~~~i~~~~~  213 (221)
T 3r6d_A          197 DETPFHRTSIGVGEPGT  213 (221)
T ss_dssp             CCGGGTTEEEEEECTTC
T ss_pred             ChhhhhcceeeecCCCC
Confidence            87666655554444443

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.94  E-value=1.1e-25  Score=196.79  Aligned_cols=232  Identities=16%  Similarity=0.118  Sum_probs=171.3

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhc-CCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK-GLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      ++|+||||||+|+||++++++|+++|++|++++|+.+...+..+.+... +.++.++.+|++|.+++++++++      +
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~------~   77 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA------H   77 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH------S
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc------c
Confidence            5789999999999999999999999999999999877655555444432 45788899999999999988865      5


Q ss_pred             cccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC-----------CC
Q 024230           98 KLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA-----------NV  166 (270)
Q Consensus        98 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~-----------~~  166 (270)
                      ++|++|||||......    ..+...+.+++|+.+++++++++    ++.+.++||++||...+...           ..
T Consensus        78 ~~d~vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~  149 (341)
T 3enk_A           78 PITAAIHFAALKAVGE----SVAKPIEYYRNNLDSLLSLLRVM----RERAVKRIVFSSSATVYGVPERSPIDETFPLSA  149 (341)
T ss_dssp             CCCEEEECCCCCCHHH----HHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBC
T ss_pred             CCcEEEECccccccCc----cccChHHHHHHHHHHHHHHHHHH----HhCCCCEEEEEecceEecCCCCCCCCCCCCCCC
Confidence            8999999999754321    23345578899999999887765    55666899999998766322           22


Q ss_pred             ChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC------hh---hHHH-Hhhc-CC---------
Q 024230          167 GTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN------GK---FVDE-VKSR-TP---------  226 (270)
Q Consensus       167 ~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~------~~---~~~~-~~~~-~~---------  226 (270)
                      ...|+.||++.+.+++.++.++.  +++++.+.|+.+..+........      ..   .... .... .+         
T Consensus       150 ~~~Y~~sK~~~e~~~~~~~~~~~--~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  227 (341)
T 3enk_A          150 TNPYGQTKLMAEQILRDVEAADP--SWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYP  227 (341)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHCT--TCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSS
T ss_pred             CChhHHHHHHHHHHHHHHhhcCC--CceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccC
Confidence            35899999999999999998853  69999999999988754322110      11   1111 1111 11         


Q ss_pred             ------CCCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCccccc
Q 024230          227 ------MGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       227 ------~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                            ...+..++|+++++++++........|+++++.+|..++.
T Consensus       228 ~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~  273 (341)
T 3enk_A          228 TPDGTGVRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGYSV  273 (341)
T ss_dssp             STTSSCEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEEH
T ss_pred             CCCCCeeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCceeH
Confidence                  1124457999999999886422335799999999877654

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.94  E-value=1.7e-25  Score=195.19  Aligned_cols=225  Identities=17%  Similarity=0.143  Sum_probs=169.5

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhc-CCeEEEE-EccCCCHHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK-GLKVTGS-VCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~-~~~~~~~-~~D~~~~~~~~~~~~~i~~   93 (270)
                      ..+++|+||||||+|+||++++++|+++|++|++++|+.+..+.+.+.+... +.++.++ .+|++|.+++++++     
T Consensus         7 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-----   81 (342)
T 1y1p_A            7 VLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVI-----   81 (342)
T ss_dssp             SSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTT-----
T ss_pred             cCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHH-----
Confidence            4578899999999999999999999999999999999988776655554332 3467777 79999988776665     


Q ss_pred             HcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccc-cCC-------
Q 024230           94 LFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIV-SAN-------  165 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~-~~~-------  165 (270)
                         .++|++||||+.....       +++++.+++|+.++.++++++.+   +.+.++||++||..++. +.+       
T Consensus        82 ---~~~d~vih~A~~~~~~-------~~~~~~~~~n~~g~~~ll~~~~~---~~~~~~iv~~SS~~~~~~~~~~~~~~~~  148 (342)
T 1y1p_A           82 ---KGAAGVAHIASVVSFS-------NKYDEVVTPAIGGTLNALRAAAA---TPSVKRFVLTSSTVSALIPKPNVEGIYL  148 (342)
T ss_dssp             ---TTCSEEEECCCCCSCC-------SCHHHHHHHHHHHHHHHHHHHHT---CTTCCEEEEECCGGGTCCCCTTCCCCEE
T ss_pred             ---cCCCEEEEeCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHh---CCCCcEEEEeccHHHhcCCCCCCCCccc
Confidence               4789999999975432       23567899999999999998853   23457999999987763 211       


Q ss_pred             -----------------------CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC---hhhHH
Q 024230          166 -----------------------VGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN---GKFVD  219 (270)
Q Consensus       166 -----------------------~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~---~~~~~  219 (270)
                                             ....|+.||++.+.+++.++.++.. +++++.+.||.+.+++.......   ..+..
T Consensus       149 ~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~  227 (342)
T 1y1p_A          149 DEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-HFTLNAVLPNYTIGTIFDPETQSGSTSGWMM  227 (342)
T ss_dssp             CTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-SSEEEEEEESEEECCCSCTTTCCCHHHHHHH
T ss_pred             CccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCC-CceEEEEcCCceECCCCCCCCCCccHHHHHH
Confidence                                   2257999999999999999999876 89999999999999876542211   11222


Q ss_pred             HHhhcC--------CCCCCCChHhHHHHHHHHhCCCCCCccCcEEeecCC
Q 024230          220 EVKSRT--------PMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGG  261 (270)
Q Consensus       220 ~~~~~~--------~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG  261 (270)
                      .+....        +...+..++|+++++++++..  ...+|+.+..+|+
T Consensus       228 ~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~--~~~~g~~~~~~g~  275 (342)
T 1y1p_A          228 SLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVL--PQIERRRVYGTAG  275 (342)
T ss_dssp             HHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHC--TTCCSCEEEECCE
T ss_pred             HHHcCCCccccccCCcCCEeEHHHHHHHHHHHHcC--cccCCceEEEeCC
Confidence            221111        233466799999999998864  3457876666654

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.94  E-value=2.5e-25  Score=195.25  Aligned_cols=218  Identities=16%  Similarity=0.089  Sum_probs=171.1

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHC-CC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSML-GA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~-G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .+++|+||||||+|+||++++++|+++ |+ +|++++|++.+.++..+.+.  ..++.++.+|++|.+++.+++      
T Consensus        18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~------   89 (344)
T 2gn4_A           18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN--DPRMRFFIGDVRDLERLNYAL------   89 (344)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC--CTTEEEEECCTTCHHHHHHHT------
T ss_pred             hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc--CCCEEEEECCCCCHHHHHHHH------
Confidence            477999999999999999999999999 98 99999999888777666553  356889999999998887776      


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                        .++|++||+||.... +   ....+..+.+++|+.++.++++++.+    .+.++||++||..+..+   ...|+.||
T Consensus        90 --~~~D~Vih~Aa~~~~-~---~~~~~~~~~~~~Nv~gt~~l~~aa~~----~~v~~~V~~SS~~~~~p---~~~Y~~sK  156 (344)
T 2gn4_A           90 --EGVDICIHAAALKHV-P---IAEYNPLECIKTNIMGASNVINACLK----NAISQVIALSTDKAANP---INLYGATK  156 (344)
T ss_dssp             --TTCSEEEECCCCCCH-H---HHHHSHHHHHHHHHHHHHHHHHHHHH----TTCSEEEEECCGGGSSC---CSHHHHHH
T ss_pred             --hcCCEEEECCCCCCC-C---chhcCHHHHHHHHHHHHHHHHHHHHh----CCCCEEEEecCCccCCC---ccHHHHHH
Confidence              478999999997542 1   11233567899999999999999964    35679999999876654   46799999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcC-C--------CCCCCChHhHHHHHHHHhC
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRT-P--------MGRLGEPKEVSSLVAFLCM  245 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~-~--------~~~~~~~~dva~~~~~l~s  245 (270)
                      ++++.++++++.++.+.|++++.+.||.+.++....+   +.+...+.... +        ...+..++|+++++++++.
T Consensus       157 ~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~~i---~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~l~  233 (344)
T 2gn4_A          157 LCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSVV---PFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLK  233 (344)
T ss_dssp             HHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTSHH---HHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCCHH---HHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHHHh
Confidence            9999999999988888899999999999998753211   22222222221 1        1235689999999999986


Q ss_pred             CCCCCccCcEEeecCC
Q 024230          246 PAASYITGQTVCIDGG  261 (270)
Q Consensus       246 ~~~~~~~G~~i~vdgG  261 (270)
                      ..   ..|+++.++++
T Consensus       234 ~~---~~g~~~~~~~~  246 (344)
T 2gn4_A          234 RM---HGGEIFVPKIP  246 (344)
T ss_dssp             HC---CSSCEEEECCC
T ss_pred             hc---cCCCEEecCCC
Confidence            43   36888888776

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.94  E-value=1.7e-25  Score=196.62  Aligned_cols=232  Identities=13%  Similarity=0.031  Sum_probs=173.7

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChh----HHHHHHHHHHhc-CCeEEEEEccCCCHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTET----ELNECIHHLQMK-GLKVTGSVCDVSSRPQRQTLIN   89 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~----~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~   89 (270)
                      .+++++|+||||||+|+||++++++|+++|++|++++|+..    .++.+.+.+... +.++.++.+|++|.+++.+++ 
T Consensus        22 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-  100 (352)
T 1sb8_A           22 ELPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC-  100 (352)
T ss_dssp             HHHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH-
T ss_pred             hcCccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHh-
Confidence            45678899999999999999999999999999999999753    233332222111 246888999999998887776 


Q ss_pred             HHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCC----
Q 024230           90 TVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSAN----  165 (270)
Q Consensus        90 ~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~----  165 (270)
                             .++|++||||+.....    .+.+++++.+++|+.++.++++++.+    .+.++||++||...+.+.+    
T Consensus       101 -------~~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~SS~~~~~~~~~~~~  165 (352)
T 1sb8_A          101 -------AGVDYVLHQAALGSVP----RSINDPITSNATNIDGFLNMLIAARD----AKVQSFTYAASSSTYGDHPGLPK  165 (352)
T ss_dssp             -------TTCSEEEECCSCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGTTCCCSSB
T ss_pred             -------cCCCEEEECCcccCch----hhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeccHHhcCCCCCCCC
Confidence                   4799999999975321    13456788999999999999999853    4567999999998765443    


Q ss_pred             -------CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC----ChhhHHHHhhcCCC-------
Q 024230          166 -------VGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG----NGKFVDEVKSRTPM-------  227 (270)
Q Consensus       166 -------~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~-------  227 (270)
                             ....|+.+|++.+.+++.++.++   |++++.+.||.+.++.......    ...+...+....+.       
T Consensus       166 ~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~  242 (352)
T 1sb8_A          166 VEDTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGE  242 (352)
T ss_dssp             CTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSC
T ss_pred             CCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCC
Confidence                   25689999999999999998875   7999999999999986543210    11222333222221       


Q ss_pred             --CCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCccccc
Q 024230          228 --GRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       228 --~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                        ..+..++|+++++++++... ....|+++++.+|..++.
T Consensus       243 ~~~~~i~v~Dva~a~~~~~~~~-~~~~~~~~ni~~~~~~s~  282 (352)
T 1sb8_A          243 TSRDFCYIENTVQANLLAATAG-LDARNQVYNIAVGGRTSL  282 (352)
T ss_dssp             CEECCEEHHHHHHHHHHHHTCC-GGGCSEEEEESCSCCEEH
T ss_pred             ceEeeEEHHHHHHHHHHHHhcc-ccCCCceEEeCCCCCccH
Confidence              23567999999999988642 346799999999876554

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.94  E-value=7e-26  Score=196.31  Aligned_cols=222  Identities=14%  Similarity=0.106  Sum_probs=167.3

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      .....|+||||||+|+||++++++|+++|++|++++|+++. +.    +     ++.++.+|++|.+++.++++.     
T Consensus         8 ~~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l-----~~~~~~~Dl~d~~~~~~~~~~-----   72 (321)
T 2pk3_A            8 HHHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P-----NVEMISLDIMDSQRVKKVISD-----   72 (321)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T-----TEEEEECCTTCHHHHHHHHHH-----
T ss_pred             cccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c-----eeeEEECCCCCHHHHHHHHHh-----
Confidence            34566899999999999999999999999999999998764 21    1     577889999999999888865     


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC-----------
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA-----------  164 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~-----------  164 (270)
                       +++|++|||||.....    .+.+++++.+++|+.++.++++++ +.+  .+.++||++||...+...           
T Consensus        73 -~~~d~vih~A~~~~~~----~~~~~~~~~~~~Nv~g~~~l~~a~-~~~--~~~~~iv~~SS~~v~g~~~~~~~~~~E~~  144 (321)
T 2pk3_A           73 -IKPDYIFHLAAKSSVK----DSWLNKKGTFSTNVFGTLHVLDAV-RDS--NLDCRILTIGSSEEYGMILPEESPVSEEN  144 (321)
T ss_dssp             -HCCSEEEECCSCCCHH----HHTTCHHHHHHHHHHHHHHHHHHH-HHH--TCCCEEEEEEEGGGTBSCCGGGCSBCTTS
T ss_pred             -cCCCEEEEcCcccchh----hhhhcHHHHHHHHHHHHHHHHHHH-HHh--CCCCeEEEEccHHhcCCCCCCCCCCCCCC
Confidence             3699999999975321    122357789999999999999999 544  245799999999766432           


Q ss_pred             --CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhh---c-----------CCCC
Q 024230          165 --NVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKS---R-----------TPMG  228 (270)
Q Consensus       165 --~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~---~-----------~~~~  228 (270)
                        +....|+.+|++.+.+++.++.++   |++++.+.||.+.++..........+...+..   .           .+..
T Consensus       145 ~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  221 (321)
T 2pk3_A          145 QLRPMSPYGVSKASVGMLARQYVKAY---GMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVR  221 (321)
T ss_dssp             CCBCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEE
T ss_pred             CCCCCCccHHHHHHHHHHHHHHHHHc---CCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEE
Confidence              345689999999999999998874   89999999999999865431101122222222   1           1122


Q ss_pred             CCCChHhHHHHHHHHhCCCCCCccCcEEeecCCccccc
Q 024230          229 RLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       229 ~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                      .+..++|+++++++++...   .+|+++++++|..++.
T Consensus       222 ~~v~v~Dva~a~~~~~~~~---~~g~~~~i~~~~~~s~  256 (321)
T 2pk3_A          222 DFTDVRDIVQAYWLLSQYG---KTGDVYNVCSGIGTRI  256 (321)
T ss_dssp             EEEEHHHHHHHHHHHHHHC---CTTCEEEESCSCEEEH
T ss_pred             eeEEHHHHHHHHHHHHhCC---CCCCeEEeCCCCCeeH
Confidence            3567999999999999754   4799999999976654

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.94  E-value=2.6e-25  Score=194.50  Aligned_cols=224  Identities=15%  Similarity=0.128  Sum_probs=167.7

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh-hHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTE-TELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      |+||||||+|+||++++++|+++|++|++++|+. +......+.+.. ..++.++.+|++|.++++++++.      .++
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~Dl~d~~~~~~~~~~------~~~   74 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS-LGNFEFVHGDIRNKNDVTRLITK------YMP   74 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT-TCCCEEEECCTTCHHHHHHHHHH------HCC
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc-CCceEEEEcCCCCHHHHHHHHhc------cCC
Confidence            5899999999999999999999999999999853 222233334433 24678899999999998888865      269


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccccc----------------
Q 024230          100 NIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVS----------------  163 (270)
Q Consensus       100 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~----------------  163 (270)
                      |++|||||....    +.+.+++++.+++|+.++.++++++.+.+.   .++||++||...+..                
T Consensus        75 d~vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~---~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~  147 (347)
T 1orr_A           75 DSCFHLAGQVAM----TTSIDNPCMDFEINVGGTLNLLEAVRQYNS---NCNIIYSSTNKVYGDLEQYKYNETETRYTCV  147 (347)
T ss_dssp             SEEEECCCCCCH----HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT---TCEEEEEEEGGGGTTCTTSCEEECSSCEEET
T ss_pred             CEEEECCcccCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC---CceEEEeccHHHhCCCCcCCccccccccccc
Confidence            999999997432    123456788999999999999999977652   268999999875432                


Q ss_pred             -----------CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC---hhhHHHHhhcC----
Q 024230          164 -----------ANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN---GKFVDEVKSRT----  225 (270)
Q Consensus       164 -----------~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~---~~~~~~~~~~~----  225 (270)
                                 .+....|+.+|++.+.+++.++.++   |++++.+.||++.++........   ..+........    
T Consensus       148 ~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (347)
T 1orr_A          148 DKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGIN  224 (347)
T ss_dssp             TCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCC
T ss_pred             ccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCC
Confidence                       2245689999999999999999875   79999999999999875432111   11222221111    


Q ss_pred             -CCC---------CCCChHhHHHHHHHHhCCCCCCccCcEEeecCCc
Q 024230          226 -PMG---------RLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGF  262 (270)
Q Consensus       226 -~~~---------~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~  262 (270)
                       +..         .+..++|+++++++++.. ....+|+++++++|.
T Consensus       225 ~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~-~~~~~g~~~~v~~~~  270 (347)
T 1orr_A          225 KPFTISGNGKQVRDVLHAEDMISLYFTALAN-VSKIRGNAFNIGGTI  270 (347)
T ss_dssp             CCEEEESSSCCEEECEEHHHHHHHHHHHHHT-HHHHTTCEEEESSCG
T ss_pred             CCeEEecCCcceEeeEEHHHHHHHHHHHHhc-cccCCCCEEEeCCCC
Confidence             221         245799999999999863 245789999999986

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.93  E-value=1.3e-26  Score=193.26  Aligned_cols=199  Identities=16%  Similarity=0.144  Sum_probs=152.2

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCC--eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      +++++|+++||||+|+||++++++|+++|+  +|++++|+++..+...      ...+.++.+|++|++++++++     
T Consensus        14 ~~m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~------~~~~~~~~~D~~d~~~~~~~~-----   82 (242)
T 2bka_A           14 FRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA------YKNVNQEVVDFEKLDDYASAF-----   82 (242)
T ss_dssp             HHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG------GGGCEEEECCGGGGGGGGGGG-----
T ss_pred             hhhcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc------cCCceEEecCcCCHHHHHHHh-----
Confidence            357899999999999999999999999999  9999999876543211      125778899999998877665     


Q ss_pred             HcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhh
Q 024230           94 LFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                         .++|++|||||....       .+++++.+++|+.++..+++++    .+.+.++||++||..++.+  ....|+.+
T Consensus        83 ---~~~d~vi~~ag~~~~-------~~~~~~~~~~n~~~~~~~~~~~----~~~~~~~iv~~SS~~~~~~--~~~~Y~~s  146 (242)
T 2bka_A           83 ---QGHDVGFCCLGTTRG-------KAGAEGFVRVDRDYVLKSAELA----KAGGCKHFNLLSSKGADKS--SNFLYLQV  146 (242)
T ss_dssp             ---SSCSEEEECCCCCHH-------HHHHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEECCTTCCTT--CSSHHHHH
T ss_pred             ---cCCCEEEECCCcccc-------cCCcccceeeeHHHHHHHHHHH----HHCCCCEEEEEccCcCCCC--CcchHHHH
Confidence               479999999996421       2456789999999999988775    4555689999999987653  34579999


Q ss_pred             HHHHHHHHHHHHHHHccCCc-eEEEEecCcccCCCCccccCChhhHHHHhhcCC----CCCCCChHhHHHHHHHHhCCCC
Q 024230          174 KGAMNQLAKNLACEWAKDNI-RTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTP----MGRLGEPKEVSSLVAFLCMPAA  248 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i-~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~dva~~~~~l~s~~~  248 (270)
                      |++++.+++.+       ++ +++.|+||++.+++..... ............+    .++..+++|+|+++++++++..
T Consensus       147 K~~~e~~~~~~-------~~~~~~~vrpg~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~  218 (242)
T 2bka_A          147 KGEVEAKVEEL-------KFDRYSVFRPGVLLCDRQESRP-GEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPR  218 (242)
T ss_dssp             HHHHHHHHHTT-------CCSEEEEEECCEEECTTGGGSH-HHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCC
T ss_pred             HHHHHHHHHhc-------CCCCeEEEcCceecCCCCCCcH-HHHHHHHhhcccCccccCCcccCHHHHHHHHHHHHhCcc
Confidence            99999998764       46 7999999999998653211 1111222222233    3457789999999999998654


Q ss_pred             C
Q 024230          249 S  249 (270)
Q Consensus       249 ~  249 (270)
                      .
T Consensus       219 ~  219 (242)
T 2bka_A          219 D  219 (242)
T ss_dssp             C
T ss_pred             c
Confidence            3

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.93  E-value=1.3e-25  Score=195.76  Aligned_cols=221  Identities=14%  Similarity=0.068  Sum_probs=158.7

Q ss_pred             ccccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Q 024230           12 RQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTV   91 (270)
Q Consensus        12 ~~~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i   91 (270)
                      ..+..++++|+||||||+|+||++++++|+++|++|++++|+.+...+..+.+    .++.++.+|++|.++++++++++
T Consensus        12 ~~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l----~~v~~~~~Dl~d~~~~~~~~~~~   87 (330)
T 2pzm_A           12 SGLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV----AGLSVIEGSVTDAGLLERAFDSF   87 (330)
T ss_dssp             --CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC----TTEEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc----CCceEEEeeCCCHHHHHHHHhhc
Confidence            35568999999999999999999999999999999999999754322111111    36788999999999998888653


Q ss_pred             HHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC-----C-
Q 024230           92 SSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA-----N-  165 (270)
Q Consensus        92 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~-----~-  165 (270)
                            ++|++|||||.....     +.++++  +++|+.+++++++++.    +.+.++||++||...+...     + 
T Consensus        88 ------~~D~vih~A~~~~~~-----~~~~~~--~~~N~~~~~~l~~a~~----~~~~~~iV~~SS~~~~~~~~~~~~~~  150 (330)
T 2pzm_A           88 ------KPTHVVHSAAAYKDP-----DDWAED--AATNVQGSINVAKAAS----KAGVKRLLNFQTALCYGRPATVPIPI  150 (330)
T ss_dssp             ------CCSEEEECCCCCSCT-----TCHHHH--HHHHTHHHHHHHHHHH----HHTCSEEEEEEEGGGGCSCSSSSBCT
T ss_pred             ------CCCEEEECCccCCCc-----cccChh--HHHHHHHHHHHHHHHH----HcCCCEEEEecCHHHhCCCccCCCCc
Confidence                  689999999975432     345555  9999999999999985    3456799999999876543     2 


Q ss_pred             -----CChhhhhhHHHHHHHHHHHHHHHccCCce-EEEEecCcccCCCCccccCChhhHHHHhhc-CC-----CCCCCCh
Q 024230          166 -----VGTVYSATKGAMNQLAKNLACEWAKDNIR-TNSVAPWYIRTPFTEPLLGNGKFVDEVKSR-TP-----MGRLGEP  233 (270)
Q Consensus       166 -----~~~~y~~sKaal~~~~~sla~el~~~~i~-v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~  233 (270)
                           ....|+.+|++++.+++.+  ++....+| ++.+.||. .+.+.      ..+...+... ..     ...+..+
T Consensus       151 ~E~~~~~~~Y~~sK~~~e~~~~~~--~~~~~~iR~~~v~gp~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~~i~~  221 (330)
T 2pzm_A          151 DSPTAPFTSYGISKTAGEAFLMMS--DVPVVSLRLANVTGPRL-AIGPI------PTFYKRLKAGQKCFCSDTVRDFLDM  221 (330)
T ss_dssp             TCCCCCCSHHHHHHHHHHHHHHTC--SSCEEEEEECEEECTTC-CSSHH------HHHHHHHHTTCCCCEESCEECEEEH
T ss_pred             CCCCCCCChHHHHHHHHHHHHHHc--CCCEEEEeeeeeECcCC-CCCHH------HHHHHHHHcCCEEeCCCCEecceeH
Confidence                 4568999999999999886  33333344 34444442 22111      1111211111 11     2345689


Q ss_pred             HhHHH-HHHHHhCCCCCCccCcEEeecCCccccc
Q 024230          234 KEVSS-LVAFLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       234 ~dva~-~~~~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                      +|+++ +++++++.. .   |+++++++|..++.
T Consensus       222 ~Dva~~a~~~~~~~~-~---g~~~~v~~~~~~s~  251 (330)
T 2pzm_A          222 SDFLAIADLSLQEGR-P---TGVFNVSTGEGHSI  251 (330)
T ss_dssp             HHHHHHHHHHTSTTC-C---CEEEEESCSCCEEH
T ss_pred             HHHHHHHHHHHhhcC-C---CCEEEeCCCCCCCH
Confidence            99999 999999763 2   99999999977654

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.93  E-value=3.2e-25  Score=185.39  Aligned_cols=215  Identities=12%  Similarity=-0.016  Sum_probs=157.3

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHC--CCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSML--GATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~--G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      +++|+|+||||+|+||++++++|+++  |++|++++|+++..+.+       ..++.++.+|++|.+++.+++       
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~-------   67 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-------GGEADVFIGDITDADSINPAF-------   67 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-------TCCTTEEECCTTSHHHHHHHH-------
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-------CCCeeEEEecCCCHHHHHHHH-------
Confidence            46799999999999999999999999  89999999997765432       345678899999999888877       


Q ss_pred             CCcccEEEECCCCCCCCCC---------CCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCC
Q 024230           96 NGKLNIFVNNVGTSVLKPT---------LEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANV  166 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~---------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~  166 (270)
                       .++|++|||||.......         .+...+++++.+++|+.++.++++++.    +.+.++||++||..+..+.+.
T Consensus        68 -~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~  142 (253)
T 1xq6_A           68 -QGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAK----VAGVKHIVVVGSMGGTNPDHP  142 (253)
T ss_dssp             -TTCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHH----HHTCSEEEEEEETTTTCTTCG
T ss_pred             -cCCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHH----HcCCCEEEEEcCccCCCCCCc
Confidence             468999999997543211         122233445678999999999988874    445679999999987654433


Q ss_pred             Chh-----hhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHH
Q 024230          167 GTV-----YSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVA  241 (270)
Q Consensus       167 ~~~-----y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  241 (270)
                      ...     |+.+|.+++.+++.       .|++++.+.||++.++..............+..  ...+..+++|++++++
T Consensus       143 ~~~~~~~~y~~sK~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dva~~~~  213 (253)
T 1xq6_A          143 LNKLGNGNILVWKRKAEQYLAD-------SGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQ--TDTKTVPRADVAEVCI  213 (253)
T ss_dssp             GGGGGGCCHHHHHHHHHHHHHT-------SSSCEEEEEECEEECSCSSSSCEEEESTTGGGG--SSCCEEEHHHHHHHHH
T ss_pred             cccccchhHHHHHHHHHHHHHh-------CCCceEEEecceeecCCcchhhhhccCCcCCcC--CCCcEEcHHHHHHHHH
Confidence            333     55699999988753       689999999999998864321000000001111  1234678999999999


Q ss_pred             HHhCCCCCCccCcEEeecCCc
Q 024230          242 FLCMPAASYITGQTVCIDGGF  262 (270)
Q Consensus       242 ~l~s~~~~~~~G~~i~vdgG~  262 (270)
                      +++...  ..+|+++++++|.
T Consensus       214 ~~~~~~--~~~g~~~~i~~~~  232 (253)
T 1xq6_A          214 QALLFE--EAKNKAFDLGSKP  232 (253)
T ss_dssp             HHTTCG--GGTTEEEEEEECC
T ss_pred             HHHcCc--cccCCEEEecCCC
Confidence            999653  2579999999863

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.93  E-value=1.4e-25  Score=195.68  Aligned_cols=225  Identities=15%  Similarity=0.082  Sum_probs=165.4

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCC--CeEEEeeCChh--HHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLG--ATVHTCSRTET--ELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G--~~v~l~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      ++++||||||+|+||++++++|+++|  ++|++++|+..  ..+.+ +.+. .+.++.++.+|++|.+++++++      
T Consensus         2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~------   73 (336)
T 2hun_A            2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDLE-DDPRYTFVKGDVADYELVKELV------   73 (336)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTT-TCTTEEEEECCTTCHHHHHHHH------
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhhc-cCCceEEEEcCCCCHHHHHHHh------
Confidence            45789999999999999999999997  89999998642  11111 1111 1346888999999999888777      


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccc-----------c
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIV-----------S  163 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~-----------~  163 (270)
                        +++|++|||||....    +.+.+++++.+++|+.++.++++++.+.   ...++||++||...+.           +
T Consensus        74 --~~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~E~~~  144 (336)
T 2hun_A           74 --RKVDGVVHLAAESHV----DRSISSPEIFLHSNVIGTYTLLESIRRE---NPEVRFVHVSTDEVYGDILKGSFTENDR  144 (336)
T ss_dssp             --HTCSEEEECCCCCCH----HHHHHCTHHHHHHHHHHHHHHHHHHHHH---CTTSEEEEEEEGGGGCCCSSSCBCTTBC
T ss_pred             --hCCCEEEECCCCcCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCcEEEEeccHHHHCCCCCCCcCCCCC
Confidence              478999999997531    1234567789999999999999999765   2236999999986543           2


Q ss_pred             CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcC---------CCCCCCChH
Q 024230          164 ANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRT---------PMGRLGEPK  234 (270)
Q Consensus       164 ~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~  234 (270)
                      .+....|+.||++.+.+++.++.++   |++++.+.||.+.++....-.....+........         ....+..++
T Consensus       145 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  221 (336)
T 2hun_A          145 LMPSSPYSATKAASDMLVLGWTRTY---NLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVE  221 (336)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHT---TCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHH
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHH
Confidence            2345689999999999999998874   7999999999999986532100112222222211         122355789


Q ss_pred             hHHHHHHHHhCCCCCCccCcEEeecCCccccc
Q 024230          235 EVSSLVAFLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       235 dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                      |+++++++++...   .+|+++++++|..++.
T Consensus       222 Dva~~~~~~~~~~---~~g~~~~v~~~~~~s~  250 (336)
T 2hun_A          222 DHVRAIELVLLKG---ESREIYNISAGEEKTN  250 (336)
T ss_dssp             HHHHHHHHHHHHC---CTTCEEEECCSCEECH
T ss_pred             HHHHHHHHHHhCC---CCCCEEEeCCCCcccH
Confidence            9999999998643   4799999999976543

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.93  E-value=1.4e-25  Score=197.46  Aligned_cols=227  Identities=15%  Similarity=0.128  Sum_probs=168.7

Q ss_pred             EEEEecCCCcHHHHHHHHHHHC-CCeEEEeeCChh--HHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           22 TALVTGGTKGLGLAVVEELSML-GATVHTCSRTET--ELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~-G~~v~l~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      +||||||+|+||++++++|+++ |++|++++|+..  ..+.+ .++. .+.++.++.+|++|.+++.+++++      .+
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~------~~   73 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDIS-ESNRYNFEHADICDSAEITRIFEQ------YQ   73 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTT-TCTTEEEEECCTTCHHHHHHHHHH------HC
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhh-cCCCeEEEECCCCCHHHHHHHHhh------cC
Confidence            6999999999999999999998 799999998652  12111 1111 134688899999999998888865      37


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CcEEEEecCcccccc----------
Q 024230           99 LNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-----AASIVLMSSALGIVS----------  163 (270)
Q Consensus        99 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-----~g~ii~iss~~~~~~----------  163 (270)
                      +|++|||||....    +.+.+++++.+++|+.++.++++++.+.|..-+     .++||++||...+..          
T Consensus        74 ~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~  149 (361)
T 1kew_A           74 PDAVMHLAAESHV----DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENS  149 (361)
T ss_dssp             CSEEEECCSCCCH----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTT
T ss_pred             CCEEEECCCCcCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCccccccccc
Confidence            9999999997531    123456788999999999999999999875321     259999999764421          


Q ss_pred             -----------CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCC------
Q 024230          164 -----------ANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTP------  226 (270)
Q Consensus       164 -----------~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~------  226 (270)
                                 .+....|+.||++.+.+++.++.++   |++++.+.||.+.++..........+........+      
T Consensus       150 ~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (361)
T 1kew_A          150 VTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGK  226 (361)
T ss_dssp             SCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETT
T ss_pred             ccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCC
Confidence                       2345689999999999999999886   79999999999999875321001122222222211      


Q ss_pred             ---CCCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCccccc
Q 024230          227 ---MGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       227 ---~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                         ...+..++|++++++++++..   .+|+++++++|..++.
T Consensus       227 ~~~~~~~i~v~Dva~a~~~~~~~~---~~g~~~~v~~~~~~s~  266 (361)
T 1kew_A          227 GDQIRDWLYVEDHARALHMVVTEG---KAGETYNIGGHNEKKN  266 (361)
T ss_dssp             SCCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEECCCCEEEH
T ss_pred             CceeEeeEEHHHHHHHHHHHHhCC---CCCCEEEecCCCeeeH
Confidence               123557999999999999643   4899999999986543

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.93  E-value=4.5e-25  Score=193.27  Aligned_cols=236  Identities=13%  Similarity=0.069  Sum_probs=162.7

Q ss_pred             ccccccCCCCCCEEEEecCCCcHHHHHHHHHHHCC--CeEEEeeCChhHH-HHHHHHHHhcCCeEEEEEccCCCHHHHHH
Q 024230           10 HSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLG--ATVHTCSRTETEL-NECIHHLQMKGLKVTGSVCDVSSRPQRQT   86 (270)
Q Consensus        10 ~~~~~~~~l~gk~vlItG~s~giG~~la~~l~~~G--~~v~l~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   86 (270)
                      .....+|++++|+||||||+|+||.+++++|+++|  ++|+.++|..... ......+ ....++.++.+|++|.+++.+
T Consensus        14 ~~~n~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~Dl~d~~~~~~   92 (346)
T 4egb_A           14 GTENLYFQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSI-QDHPNYYFVKGEIQNGELLEH   92 (346)
T ss_dssp             ----------CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTT-TTCTTEEEEECCTTCHHHHHH
T ss_pred             CccccccccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhh-ccCCCeEEEEcCCCCHHHHHH
Confidence            33344567889999999999999999999999999  6788887764211 1111111 112478899999999999988


Q ss_pred             HHHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCC-
Q 024230           87 LINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSAN-  165 (270)
Q Consensus        87 ~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~-  165 (270)
                      +++.      .++|++||+|+.....    ...+++++.+++|+.++.++++++    .+.+.+++|++||...+...+ 
T Consensus        93 ~~~~------~~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~v~~SS~~vy~~~~~  158 (346)
T 4egb_A           93 VIKE------RDVQVIVNFAAESHVD----RSIENPIPFYDTNVIGTVTLLELV----KKYPHIKLVQVSTDEVYGSLGK  158 (346)
T ss_dssp             HHHH------HTCCEEEECCCCC-------------CHHHHHHTHHHHHHHHHH----HHSTTSEEEEEEEGGGGCCCCS
T ss_pred             HHhh------cCCCEEEECCcccchh----hhhhCHHHHHHHHHHHHHHHHHHH----HhcCCCEEEEeCchHHhCCCCc
Confidence            8865      2689999999986432    244567788999999999999888    444567899999987665432 


Q ss_pred             -----------CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCC------
Q 024230          166 -----------VGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMG------  228 (270)
Q Consensus       166 -----------~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~------  228 (270)
                                 ....|+.+|.+.+.+++.++.+.   |++++.+.|+.+..+..........+........+..      
T Consensus       159 ~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (346)
T 4egb_A          159 TGRFTEETPLAPNSPYSSSKASADMIALAYYKTY---QLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGL  235 (346)
T ss_dssp             SCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSC
T ss_pred             CCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCC
Confidence                       13679999999999999998874   7999999999998875432211122333333332221      


Q ss_pred             ---CCCChHhHHHHHHHHhCCCCCCccCcEEeecCCccccc
Q 024230          229 ---RLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       229 ---~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                         .+..++|+++++++++....   .|+++++.+|..++.
T Consensus       236 ~~~~~i~v~Dva~a~~~~~~~~~---~g~~~~i~~~~~~s~  273 (346)
T 4egb_A          236 NVRDWLHVTDHCSAIDVVLHKGR---VGEVYNIGGNNEKTN  273 (346)
T ss_dssp             CEECEEEHHHHHHHHHHHHHHCC---TTCEEEECCSCCEEH
T ss_pred             eEEeeEEHHHHHHHHHHHHhcCC---CCCEEEECCCCceeH
Confidence               23358999999999997543   899999999986553

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.93  E-value=3.3e-25  Score=182.13  Aligned_cols=192  Identities=14%  Similarity=0.184  Sum_probs=156.6

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHcCCccc
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSS-RPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~~~id  100 (270)
                      +|+||||+|+||++++++|+++|++|++++|+++..+..        .++.++.+|++| .+++.+++        .++|
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--------~~~~~~~~D~~d~~~~~~~~~--------~~~d   65 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY--------NNVKAVHFDVDWTPEEMAKQL--------HGMD   65 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC--------TTEEEEECCTTSCHHHHHTTT--------TTCS
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc--------CCceEEEecccCCHHHHHHHH--------cCCC
Confidence            799999999999999999999999999999998764321        468899999999 88877766        5799


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCC-------Chhhhhh
Q 024230          101 IFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANV-------GTVYSAT  173 (270)
Q Consensus       101 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~-------~~~y~~s  173 (270)
                      ++|||||....            +.+++|+.++..+++++    ++.+.++||++||..+..+.+.       ...|+.+
T Consensus        66 ~vi~~ag~~~~------------~~~~~n~~~~~~l~~a~----~~~~~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~s  129 (219)
T 3dqp_A           66 AIINVSGSGGK------------SLLKVDLYGAVKLMQAA----EKAEVKRFILLSTIFSLQPEKWIGAGFDALKDYYIA  129 (219)
T ss_dssp             EEEECCCCTTS------------SCCCCCCHHHHHHHHHH----HHTTCCEEEEECCTTTTCGGGCCSHHHHHTHHHHHH
T ss_pred             EEEECCcCCCC------------CcEeEeHHHHHHHHHHH----HHhCCCEEEEECcccccCCCcccccccccccHHHHH
Confidence            99999998652            15778999999998887    4556679999999988877666       6789999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccC
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG  253 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  253 (270)
                      |.+.+.+.+      ...|++++.+.||++.++........         ......+.+++|+|+++++++...  ...|
T Consensus       130 K~~~e~~~~------~~~~i~~~ilrp~~v~g~~~~~~~~~---------~~~~~~~i~~~Dva~~i~~~l~~~--~~~g  192 (219)
T 3dqp_A          130 KHFADLYLT------KETNLDYTIIQPGALTEEEATGLIDI---------NDEVSASNTIGDVADTIKELVMTD--HSIG  192 (219)
T ss_dssp             HHHHHHHHH------HSCCCEEEEEEECSEECSCCCSEEEE---------SSSCCCCEEHHHHHHHHHHHHTCG--GGTT
T ss_pred             HHHHHHHHH------hccCCcEEEEeCceEecCCCCCcccc---------CCCcCCcccHHHHHHHHHHHHhCc--cccC
Confidence            999999886      35789999999999998754332211         133456778999999999999753  3569


Q ss_pred             cEEeecCCc
Q 024230          254 QTVCIDGGF  262 (270)
Q Consensus       254 ~~i~vdgG~  262 (270)
                      +++++++|.
T Consensus       193 ~~~~i~~g~  201 (219)
T 3dqp_A          193 KVISMHNGK  201 (219)
T ss_dssp             EEEEEEECS
T ss_pred             cEEEeCCCC
Confidence            999997774

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.93  E-value=1.1e-24  Score=191.21  Aligned_cols=232  Identities=12%  Similarity=0.051  Sum_probs=174.7

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcC-----CeEEEEEccCCCHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG-----LKVTGSVCDVSSRPQRQTLIN   89 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~   89 (270)
                      .+.+++|+||||||+|+||++++++|+++|++|++++|+..........+....     .++.++.+|++|.+++.+++ 
T Consensus        20 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-   98 (351)
T 3ruf_A           20 QLIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVM-   98 (351)
T ss_dssp             HHHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHT-
T ss_pred             hCCCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHh-
Confidence            467789999999999999999999999999999999997654434334443321     46889999999998887776 


Q ss_pred             HHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCC---
Q 024230           90 TVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANV---  166 (270)
Q Consensus        90 ~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~---  166 (270)
                             .++|++||+|+.....    .+.++..+.+++|+.++.++++++    .+.+.+++|++||...+...+.   
T Consensus        99 -------~~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~v~~SS~~vyg~~~~~~~  163 (351)
T 3ruf_A           99 -------KGVDHVLHQAALGSVP----RSIVDPITTNATNITGFLNILHAA----KNAQVQSFTYAASSSTYGDHPALPK  163 (351)
T ss_dssp             -------TTCSEEEECCCCCCHH----HHHHCHHHHHHHHTHHHHHHHHHH----HHTTCSEEEEEEEGGGGTTCCCSSB
T ss_pred             -------cCCCEEEECCccCCcc----hhhhCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEecHHhcCCCCCCCC
Confidence                   4799999999974321    234566788999999999999888    4445679999999877654332   


Q ss_pred             --------ChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC----hhhHHHHhhcCCC-------
Q 024230          167 --------GTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN----GKFVDEVKSRTPM-------  227 (270)
Q Consensus       167 --------~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~----~~~~~~~~~~~~~-------  227 (270)
                              ...|+.+|.+.+.+++.++.+.   |++++.+.|+.+..+........    ..+........+.       
T Consensus       164 ~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~  240 (351)
T 3ruf_A          164 VEENIGNPLSPYAVTKYVNEIYAQVYARTY---GFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGE  240 (351)
T ss_dssp             CTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSC
T ss_pred             ccCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCC
Confidence                    4579999999999999998875   79999999999988754332111    2223333322221       


Q ss_pred             --CCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCccccc
Q 024230          228 --GRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       228 --~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                        ..+..++|++++++.++... ....|+++++.+|..++.
T Consensus       241 ~~~~~i~v~Dva~a~~~~~~~~-~~~~~~~~ni~~~~~~s~  280 (351)
T 3ruf_A          241 TSRDFCYIDNVIQMNILSALAK-DSAKDNIYNVAVGDRTTL  280 (351)
T ss_dssp             CEECCEEHHHHHHHHHHHHTCC-GGGCSEEEEESCSCCEEH
T ss_pred             eEEeeEEHHHHHHHHHHHHhhc-cccCCCEEEeCCCCcccH
Confidence              13456899999999988642 356899999999876654

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.92  E-value=8e-25  Score=191.16  Aligned_cols=228  Identities=15%  Similarity=0.045  Sum_probs=161.8

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHH-HHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNE-CIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      |++|+||||||+|+||++++++|+++|++|++++|+++..+. ..+.+. ...++.++.+|++|.+++.++++.+     
T Consensus         1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----   74 (345)
T 2z1m_A            1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELG-IENDVKIIHMDLLEFSNIIRTIEKV-----   74 (345)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTT-CTTTEEECCCCTTCHHHHHHHHHHH-----
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhcc-ccCceeEEECCCCCHHHHHHHHHhc-----
Confidence            468999999999999999999999999999999998764321 111111 1246888999999999998888654     


Q ss_pred             CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccc-----------cCC
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIV-----------SAN  165 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~-----------~~~  165 (270)
                       ++|++|||||....    +.+.+++++.+++|+.+++++++++.+ +  ...++||++||...+.           +.+
T Consensus        75 -~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~-~--~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~  146 (345)
T 2z1m_A           75 -QPDEVYNLAAQSFV----GVSFEQPILTAEVDAIGVLRILEALRT-V--KPDTKFYQASTSEMFGKVQEIPQTEKTPFY  146 (345)
T ss_dssp             -CCSEEEECCCCCCH----HHHTTSHHHHHHHHTHHHHHHHHHHHH-H--CTTCEEEEEEEGGGGCSCSSSSBCTTSCCC
T ss_pred             -CCCEEEECCCCcch----hhhhhCHHHHHHHHHHHHHHHHHHHHH-h--CCCceEEEEechhhcCCCCCCCCCccCCCC
Confidence             68999999997531    112345788899999999999999974 2  1137999999986542           223


Q ss_pred             CChhhhhhHHHHHHHHHHHHHHHc---cCCceEEEEecCcccCCCCccccCChhhHHHHhhc---------CC-CCCCCC
Q 024230          166 VGTVYSATKGAMNQLAKNLACEWA---KDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSR---------TP-MGRLGE  232 (270)
Q Consensus       166 ~~~~y~~sKaal~~~~~sla~el~---~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~---------~~-~~~~~~  232 (270)
                      ....|+.||++.+.+++.++.++.   ..++.++.+.||...+.+...+   ..........         .. ...+..
T Consensus       147 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (345)
T 2z1m_A          147 PRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKI---TYSLARIKYGLQDKLVLGNLNAKRDWGY  223 (345)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHH---HHHHHHHHTTSCSCEEESCTTCEECCEE
T ss_pred             CCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHH---HHHHHHHHcCCCCeeeeCCCCceeeeEE
Confidence            456899999999999999999875   3345667777887766542211   0111111111         01 123668


Q ss_pred             hHhHHHHHHHHhCCCCCCccCcEEeecCCccccc
Q 024230          233 PKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       233 ~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                      ++|++++++++++...    ++.+++.+|..++.
T Consensus       224 v~Dva~a~~~~~~~~~----~~~~~i~~~~~~s~  253 (345)
T 2z1m_A          224 APEYVEAMWLMMQQPE----PDDYVIATGETHTV  253 (345)
T ss_dssp             HHHHHHHHHHHHTSSS----CCCEEECCSCCEEH
T ss_pred             HHHHHHHHHHHHhCCC----CceEEEeCCCCccH
Confidence            9999999999997542    46788887765543

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.92  E-value=7.7e-24  Score=171.67  Aligned_cols=199  Identities=14%  Similarity=0.113  Sum_probs=150.9

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      ++|+|+||||+|+||++++++|+++|++|++++|+++..+..      ...++.++.+|++|++++.+++        ..
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~--------~~   67 (206)
T 1hdo_A            2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE------GPRPAHVVVGDVLQAADVDKTV--------AG   67 (206)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS------SCCCSEEEESCTTSHHHHHHHH--------TT
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc------cCCceEEEEecCCCHHHHHHHH--------cC
Confidence            348999999999999999999999999999999998764321      1346888999999998887776        46


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCC----CChhhhhhH
Q 024230           99 LNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSAN----VGTVYSATK  174 (270)
Q Consensus        99 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~----~~~~y~~sK  174 (270)
                      +|++||++|.....     ++      .++|+.++..+++++.    +.+.+++|++||...+...+    ....|+.+|
T Consensus        68 ~d~vi~~a~~~~~~-----~~------~~~n~~~~~~~~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~K  132 (206)
T 1hdo_A           68 QDAVIVLLGTRNDL-----SP------TTVMSEGARNIVAAMK----AHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDH  132 (206)
T ss_dssp             CSEEEECCCCTTCC-----SC------CCHHHHHHHHHHHHHH----HHTCCEEEEECCGGGTSCTTCSCGGGHHHHHHH
T ss_pred             CCEEEECccCCCCC-----Cc------cchHHHHHHHHHHHHH----HhCCCeEEEEeeeeeccCcccccccchhHHHHH
Confidence            89999999975431     11      1378888888877764    44567999999997766544    467899999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcc-cCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccC
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYI-RTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG  253 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  253 (270)
                      .+++.+.+.       .+++++.+.||++ .++....+..  .    + ...+.+...+++|+++++.+++.+.  ..+|
T Consensus       133 ~~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~--~----~-~~~~~~~~i~~~Dva~~~~~~~~~~--~~~g  196 (206)
T 1hdo_A          133 IRMHKVLRE-------SGLKYVAVMPPHIGDQPLTGAYTV--T----L-DGRGPSRVISKHDLGHFMLRCLTTD--EYDG  196 (206)
T ss_dssp             HHHHHHHHH-------TCSEEEEECCSEEECCCCCSCCEE--E----S-SSCSSCSEEEHHHHHHHHHHTTSCS--TTTT
T ss_pred             HHHHHHHHh-------CCCCEEEEeCCcccCCCCCcceEe--c----c-cCCCCCCccCHHHHHHHHHHHhcCc--cccc
Confidence            999998843       5899999999998 4443222110  0    0 1112146778999999999999763  3789


Q ss_pred             cEEeecCCc
Q 024230          254 QTVCIDGGF  262 (270)
Q Consensus       254 ~~i~vdgG~  262 (270)
                      +++.++||+
T Consensus       197 ~~~~i~~g~  205 (206)
T 1hdo_A          197 HSTYPSHQY  205 (206)
T ss_dssp             CEEEEECCC
T ss_pred             cceeeeccc
Confidence            999999986

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.92  E-value=1.3e-24  Score=180.81  Aligned_cols=200  Identities=11%  Similarity=0.028  Sum_probs=141.3

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCC-CeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLG-ATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G-~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      ..++.|+||||||+|+||++++++|+++| ++|++++|+++.+++.      ....+.++.+|++|++++++++      
T Consensus        19 ~~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~------~~~~~~~~~~Dl~d~~~~~~~~------   86 (236)
T 3qvo_A           19 FQGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP------YPTNSQIIMGDVLNHAALKQAM------   86 (236)
T ss_dssp             ---CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS------CCTTEEEEECCTTCHHHHHHHH------
T ss_pred             ecCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc------ccCCcEEEEecCCCHHHHHHHh------
Confidence            34456899999999999999999999999 8999999998765321      1246888999999999988887      


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChh-----
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTV-----  169 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~-----  169 (270)
                        ..+|++|||++..        +.              ...++.+++.|++.+.++||++||..++.+.+....     
T Consensus        87 --~~~D~vv~~a~~~--------~~--------------~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~  142 (236)
T 3qvo_A           87 --QGQDIVYANLTGE--------DL--------------DIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNA  142 (236)
T ss_dssp             --TTCSEEEEECCST--------TH--------------HHHHHHHHHHHHHTTCCEEEEECCCCC--------------
T ss_pred             --cCCCEEEEcCCCC--------ch--------------hHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhh
Confidence              4689999999852        11              123567888888888889999999988766544211     


Q ss_pred             ----hhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhC
Q 024230          170 ----YSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCM  245 (270)
Q Consensus       170 ----y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (270)
                          +...+...       ..++.+.||+++.|+||++.++....+...      .......+++.+++|+|++++++++
T Consensus       143 ~~~~~~~~~~~~-------~~~l~~~gi~~~~vrPg~i~~~~~~~~~~~------~~~~~~~~~~i~~~DvA~~i~~ll~  209 (236)
T 3qvo_A          143 VIGEPLKPFRRA-------ADAIEASGLEYTILRPAWLTDEDIIDYELT------SRNEPFKGTIVSRKSVAALITDIID  209 (236)
T ss_dssp             --CGGGHHHHHH-------HHHHHTSCSEEEEEEECEEECCSCCCCEEE------CTTSCCSCSEEEHHHHHHHHHHHHH
T ss_pred             cccchHHHHHHH-------HHHHHHCCCCEEEEeCCcccCCCCcceEEe------ccCCCCCCcEECHHHHHHHHHHHHc
Confidence                11112111       233456799999999999998754332110      0111223567789999999999999


Q ss_pred             CCCCCccCcEEeecCCcccc
Q 024230          246 PAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       246 ~~~~~~~G~~i~vdgG~~~~  265 (270)
                      +...++ |+.+.++++.+..
T Consensus       210 ~~~~~~-g~~~~i~~~~~~~  228 (236)
T 3qvo_A          210 KPEKHI-GENIGINQPGTDG  228 (236)
T ss_dssp             STTTTT-TEEEEEECSSCCC
T ss_pred             Cccccc-CeeEEecCCCCCC
Confidence            876665 9999999887655

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.92  E-value=6.8e-25  Score=193.51  Aligned_cols=225  Identities=15%  Similarity=0.078  Sum_probs=160.5

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHH--CCCeEEEeeCChhHHHHH-------HHHHHhcCCeEEEEEccCCCHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSM--LGATVHTCSRTETELNEC-------IHHLQMKGLKVTGSVCDVSSRPQRQ   85 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~--~G~~v~l~~r~~~~~~~~-------~~~~~~~~~~~~~~~~D~~~~~~~~   85 (270)
                      .|++++|+||||||+|+||++++++|++  +|++|++++|+.......       .......+.++.++.+|++|.++++
T Consensus         5 ~~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~   84 (362)
T 3sxp_A            5 DDELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLR   84 (362)
T ss_dssp             SCCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHH
T ss_pred             chhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHH
Confidence            4688999999999999999999999999  999999999976521100       0001112346788999999999888


Q ss_pred             HHHHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCC
Q 024230           86 TLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSAN  165 (270)
Q Consensus        86 ~~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~  165 (270)
                      ++      .. .++|++|||||....      +.+++++.+++|+.++.++++++    .+.+ .+||++||...+....
T Consensus        85 ~~------~~-~~~D~vih~A~~~~~------~~~~~~~~~~~Nv~gt~~ll~aa----~~~~-~~~V~~SS~~vyg~~~  146 (362)
T 3sxp_A           85 RL------EK-LHFDYLFHQAAVSDT------TMLNQELVMKTNYQAFLNLLEIA----RSKK-AKVIYASSAGVYGNTK  146 (362)
T ss_dssp             HH------TT-SCCSEEEECCCCCGG------GCCCHHHHHHHHTHHHHHHHHHH----HHTT-CEEEEEEEGGGGCSCC
T ss_pred             Hh------hc-cCCCEEEECCccCCc------cccCHHHHHHHHHHHHHHHHHHH----HHcC-CcEEEeCcHHHhCCCC
Confidence            76      12 689999999996432      33456788999999999999988    3343 4599999966554322


Q ss_pred             C----------ChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC----ChhhHHHHhhcCC-----
Q 024230          166 V----------GTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG----NGKFVDEVKSRTP-----  226 (270)
Q Consensus       166 ~----------~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~~-----  226 (270)
                      .          ...|+.||.+.+.+++.++.+     +++..+.|+.+..+.......    ...+........+     
T Consensus       147 ~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (362)
T 3sxp_A          147 APNVVGKNESPENVYGFSKLCMDEFVLSHSND-----NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFE  221 (362)
T ss_dssp             SSBCTTSCCCCSSHHHHHHHHHHHHHHHTTTT-----SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSG
T ss_pred             CCCCCCCCCCCCChhHHHHHHHHHHHHHHhcc-----CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEEC
Confidence            1          345999999999999988765     777888888777664432110    1122222222221     


Q ss_pred             ----CCCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCccccc
Q 024230          227 ----MGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       227 ----~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                          ...+..++|+++++++++...   .+| ++++.+|..++.
T Consensus       222 ~g~~~~~~i~v~Dva~ai~~~~~~~---~~g-~~~i~~~~~~s~  261 (362)
T 3sxp_A          222 FGEQLRDFVYIEDVIQANVKAMKAQ---KSG-VYNVGYSQARSY  261 (362)
T ss_dssp             GGCCEEECEEHHHHHHHHHHHTTCS---SCE-EEEESCSCEEEH
T ss_pred             CCCeEEccEEHHHHHHHHHHHHhcC---CCC-EEEeCCCCCccH
Confidence                123456999999999999764   368 999999876654

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.92  E-value=3.5e-24  Score=188.45  Aligned_cols=231  Identities=15%  Similarity=0.072  Sum_probs=170.0

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      .+++|+||||||+|+||++++++|+++|++|++++|+++........+. .+.++.++.+|+++.+++.++++.+     
T Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----   79 (357)
T 1rkx_A            6 FWQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR-VADGMQSEIGDIRDQNKLLESIREF-----   79 (357)
T ss_dssp             HHTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT-TTTTSEEEECCTTCHHHHHHHHHHH-----
T ss_pred             hhCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc-cCCceEEEEccccCHHHHHHHHHhc-----
Confidence            4678999999999999999999999999999999998765444333332 2356788999999999988888653     


Q ss_pred             CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccc------------cC
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIV------------SA  164 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~------------~~  164 (270)
                       ++|++|||||...    ...+.+++++.+++|+.++.++++++.+.   .+.++||++||...+.            +.
T Consensus        80 -~~d~vih~A~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~  151 (357)
T 1rkx_A           80 -QPEIVFHMAAQPL----VRLSYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDKCYDNKEWIWGYRENEAM  151 (357)
T ss_dssp             -CCSEEEECCSCCC----HHHHHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGGGBCCCCSSSCBCTTSCB
T ss_pred             -CCCEEEECCCCcc----cccchhCHHHHHHHHHHHHHHHHHHHHHh---CCCCeEEEecCHHHhCCCCcCCCCCCCCCC
Confidence             6899999999632    12245667889999999999999999652   2257999999987542            22


Q ss_pred             CCChhhhhhHHHHHHHHHHHHHHHc------cCCceEEEEecCcccCCCCccccC-ChhhHHHHhhcCC--------CCC
Q 024230          165 NVGTVYSATKGAMNQLAKNLACEWA------KDNIRTNSVAPWYIRTPFTEPLLG-NGKFVDEVKSRTP--------MGR  229 (270)
Q Consensus       165 ~~~~~y~~sKaal~~~~~sla~el~------~~~i~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~~--------~~~  229 (270)
                      .....|+.+|.+.+.+++.++.++.      +.|++++.+.||.+.++....... ...+...+....+        ...
T Consensus       152 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  231 (357)
T 1rkx_A          152 GGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRP  231 (357)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEEC
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECCCCCeec
Confidence            3456899999999999999999885      458999999999999875421100 1122222222111        123


Q ss_pred             CCChHhHHHHHHHHhCCC--CCCccCcEEeecCC
Q 024230          230 LGEPKEVSSLVAFLCMPA--ASYITGQTVCIDGG  261 (270)
Q Consensus       230 ~~~~~dva~~~~~l~s~~--~~~~~G~~i~vdgG  261 (270)
                      +...+|++++++.++...  .....|+++++.+|
T Consensus       232 ~v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~  265 (357)
T 1rkx_A          232 WQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPN  265 (357)
T ss_dssp             CEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCC
T ss_pred             cEeHHHHHHHHHHHHHhhhhcCCCCCceEEECCC
Confidence            456899999999888521  11246788999875

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.92  E-value=5.3e-24  Score=185.95  Aligned_cols=212  Identities=13%  Similarity=0.153  Sum_probs=157.0

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      ++||||||+|+||++++++|+++|++|++++|+++..+.    +..  .++.++.+|++|.+++.+++        .++|
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----l~~--~~~~~~~~Dl~d~~~~~~~~--------~~~d   79 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR----LAY--LEPECRVAEMLDHAGLERAL--------RGLD   79 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGG----GGG--GCCEEEECCTTCHHHHHHHT--------TTCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhh----hcc--CCeEEEEecCCCHHHHHHHH--------cCCC
Confidence            489999999999999999999999999999998765432    111  25778899999998877776        4689


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCC--------------
Q 024230          101 IFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANV--------------  166 (270)
Q Consensus       101 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~--------------  166 (270)
                      ++||+|+...      .+.+++++.+++|+.++.++++++.+    .+.++||++||...+...+.              
T Consensus        80 ~vih~a~~~~------~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~  149 (342)
T 2x4g_A           80 GVIFSAGYYP------SRPRRWQEEVASALGQTNPFYAACLQ----ARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLP  149 (342)
T ss_dssp             EEEEC------------------CHHHHHHHHHHHHHHHHHH----HTCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCC
T ss_pred             EEEECCccCc------CCCCCHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEECCHHhhCcCCCCCCCCCCCCCCccc
Confidence            9999999643      23456778899999999999999965    34579999999988765443              


Q ss_pred             --ChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCC-ccccCChhhHHHHhhcCCC----C--CCCChHhHH
Q 024230          167 --GTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFT-EPLLGNGKFVDEVKSRTPM----G--RLGEPKEVS  237 (270)
Q Consensus       167 --~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~-~~~~~~~~~~~~~~~~~~~----~--~~~~~~dva  237 (270)
                        ...|+.+|.+.+.+++.++.   . |++++.+.||.+.++.. ...  .......+....+.    .  .+..++|++
T Consensus       150 ~~~~~Y~~sK~~~e~~~~~~~~---~-g~~~~ilrp~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  223 (342)
T 2x4g_A          150 SGKSSYVLCKWALDEQAREQAR---N-GLPVVIGIPGMVLGELDIGPT--TGRVITAIGNGEMTHYVAGQRNVIDAAEAG  223 (342)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHHH---T-TCCEEEEEECEEECSCCSSCS--TTHHHHHHHTTCCCEEECCEEEEEEHHHHH
T ss_pred             cccChHHHHHHHHHHHHHHHhh---c-CCcEEEEeCCceECCCCcccc--HHHHHHHHHcCCCccccCCCcceeeHHHHH
Confidence              66899999999999999875   3 89999999999998865 211  22333333332211    1  245799999


Q ss_pred             HHHHHHhCCCCCCccCcEEeecCCccccc
Q 024230          238 SLVAFLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       238 ~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                      +++++++....   .|+++++.+|. ++.
T Consensus       224 ~~~~~~~~~~~---~g~~~~v~~~~-~s~  248 (342)
T 2x4g_A          224 RGLLMALERGR---IGERYLLTGHN-LEM  248 (342)
T ss_dssp             HHHHHHHHHSC---TTCEEEECCEE-EEH
T ss_pred             HHHHHHHhCCC---CCceEEEcCCc-ccH
Confidence            99999997543   28999999987 543

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.91  E-value=6e-23  Score=183.29  Aligned_cols=230  Identities=13%  Similarity=0.074  Sum_probs=162.0

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHH-----------------HHHHHHHhcCCeEEEEEcc
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELN-----------------ECIHHLQMKGLKVTGSVCD   77 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~-----------------~~~~~~~~~~~~~~~~~~D   77 (270)
                      ....++++||||||+|.||++++++|+++|++|++++|......                 ...+.....+.++.++.+|
T Consensus         6 ~~~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~D   85 (404)
T 1i24_A            6 HHHHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGD   85 (404)
T ss_dssp             ------CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESC
T ss_pred             ccccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECC
Confidence            35668899999999999999999999999999999998754321                 1111111224568889999


Q ss_pred             CCCHHHHHHHHHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-cEEEEec
Q 024230           78 VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGA-ASIVLMS  156 (270)
Q Consensus        78 ~~~~~~~~~~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~-g~ii~is  156 (270)
                      ++|.+++.++++..      ++|++|||||...... ...+++++.+.+++|+.++.++++++.+.    +. .+||++|
T Consensus        86 l~d~~~~~~~~~~~------~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~~~~~V~~S  154 (404)
T 1i24_A           86 ICDFEFLAESFKSF------EPDSVVHFGEQRSAPY-SMIDRSRAVYTQHNNVIGTLNVLFAIKEF----GEECHLVKLG  154 (404)
T ss_dssp             TTSHHHHHHHHHHH------CCSEEEECCSCCCHHH-HTSCHHHHHHHHHHHHHHHHHHHHHHHHH----CTTCEEEEEC
T ss_pred             CCCHHHHHHHHhcc------CCCEEEECCCCCCccc-hhhCccchhhhHHHHHHHHHHHHHHHHHh----CCCcEEEEeC
Confidence            99999988887653      5899999999754221 22367778889999999999999998543    33 4899999


Q ss_pred             Cccccc------------------------cCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCcccc
Q 024230          157 SALGIV------------------------SANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLL  212 (270)
Q Consensus       157 s~~~~~------------------------~~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~  212 (270)
                      |.+.+.                        +......|+.||++.+.+++.++.++   |++++.+.||.+.++......
T Consensus       155 S~~vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ivrp~~v~Gp~~~~~~  231 (404)
T 1i24_A          155 TMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVKTDETE  231 (404)
T ss_dssp             CGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSCCTTGG
T ss_pred             cHHHhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc---CCeEEEEecceeeCCCCCccc
Confidence            986553                        22234579999999999999998876   899999999999988542210


Q ss_pred             ---------------C--ChhhHHHHhhcCCC---------CCCCChHhHHHHHHHHhCCCCCCccC--cEEeecC
Q 024230          213 ---------------G--NGKFVDEVKSRTPM---------GRLGEPKEVSSLVAFLCMPAASYITG--QTVCIDG  260 (270)
Q Consensus       213 ---------------~--~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~l~s~~~~~~~G--~~i~vdg  260 (270)
                                     .  ...+........+.         ..+..++|++++++.++....  ..|  +++++.+
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~--~~g~~~~yni~~  305 (404)
T 1i24_A          232 MHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPA--KAGEFRVFNQFT  305 (404)
T ss_dssp             GSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCC--CTTCEEEEEECS
T ss_pred             cccccccccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcc--cCCCceEEEECC
Confidence                           0  11222222222211         123468999999999885432  246  7888865

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.91  E-value=4.2e-24  Score=186.39  Aligned_cols=217  Identities=13%  Similarity=0.024  Sum_probs=155.3

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      ...+++|+||||||+|+||++++++|+++|++|++++|+.+...+.   +... .++.++.+|++|.++++++++.    
T Consensus        16 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---l~~~-~~~~~~~~Dl~d~~~~~~~~~~----   87 (333)
T 2q1w_A           16 PRGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREH---LKDH-PNLTFVEGSIADHALVNQLIGD----   87 (333)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG---SCCC-TTEEEEECCTTCHHHHHHHHHH----
T ss_pred             eecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhh---Hhhc-CCceEEEEeCCCHHHHHHHHhc----
Confidence            3467889999999999999999999999999999999975432111   1111 3678899999999998888764    


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccc----c-------
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIV----S-------  163 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~----~-------  163 (270)
                        .++|++|||||.....     +.++++  +++|+.++.++++++.+    .+.++||++||...+.    .       
T Consensus        88 --~~~D~vih~A~~~~~~-----~~~~~~--~~~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~~g~~~~~~~~~~~E  154 (333)
T 2q1w_A           88 --LQPDAVVHTAASYKDP-----DDWYND--TLTNCVGGSNVVQAAKK----NNVGRFVYFQTALCYGVKPIQQPVRLDH  154 (333)
T ss_dssp             --HCCSEEEECCCCCSCT-----TCHHHH--HHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGCSCCCSSSBCTTS
T ss_pred             --cCCcEEEECceecCCC-----ccCChH--HHHHHHHHHHHHHHHHH----hCCCEEEEECcHHHhCCCcccCCCCcCC
Confidence              3699999999975432     334444  99999999999999854    4557999999987764    2       


Q ss_pred             --CCCChhhhhhHHHHHHHHHH-HHHHHccCCceEEEEecCcccCCCCc-cccCChhhHHHHhhc------CCCCCCCCh
Q 024230          164 --ANVGTVYSATKGAMNQLAKN-LACEWAKDNIRTNSVAPWYIRTPFTE-PLLGNGKFVDEVKSR------TPMGRLGEP  233 (270)
Q Consensus       164 --~~~~~~y~~sKaal~~~~~s-la~el~~~~i~v~~v~pG~v~t~~~~-~~~~~~~~~~~~~~~------~~~~~~~~~  233 (270)
                        .|....|+.+|++.+.+++. ++        ++..+.|+.+..+... .+  .+.+.......      .+...+..+
T Consensus       155 ~~~p~~~~Y~~sK~~~E~~~~~s~~--------~~~ilR~~~v~gp~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~v  224 (333)
T 2q1w_A          155 PRNPANSSYAISKSANEDYLEYSGL--------DFVTFRLANVVGPRNVSGP--LPIFFQRLSEGKKCFVTKARRDFVFV  224 (333)
T ss_dssp             CCCCTTCHHHHHHHHHHHHHHHHTC--------CEEEEEESEEESTTCCSSH--HHHHHHHHHTTCCCEEEECEECEEEH
T ss_pred             CCCCCCCchHHHHHHHHHHHHhhhC--------CeEEEeeceEECcCCcCcH--HHHHHHHHHcCCeeeCCCceEeeEEH
Confidence              22226899999999999987 64        5677888877665411 00  11122222111      122345679


Q ss_pred             HhHHHHHHHHhCCCCCCccCcEEeecCCccccc
Q 024230          234 KEVSSLVAFLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       234 ~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                      +|+++++++++....    |+++++++|..++.
T Consensus       225 ~Dva~ai~~~~~~~~----g~~~~v~~~~~~s~  253 (333)
T 2q1w_A          225 KDLARATVRAVDGVG----HGAYHFSSGTDVAI  253 (333)
T ss_dssp             HHHHHHHHHHHTTCC----CEEEECSCSCCEEH
T ss_pred             HHHHHHHHHHHhcCC----CCEEEeCCCCCccH
Confidence            999999999997543    89999999977654

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.91  E-value=6.9e-24  Score=191.18  Aligned_cols=223  Identities=11%  Similarity=0.025  Sum_probs=162.9

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChh---HHHHHHHHHHh---------cCCeEEEEEccCCCHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTET---ELNECIHHLQM---------KGLKVTGSVCDVSSRPQ   83 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~---~~~~~~~~~~~---------~~~~~~~~~~D~~~~~~   83 (270)
                      ....+|+||||||+|+||++++++|+++|++|++++|+++   ..+++.+.+..         ...++.++.+|++++++
T Consensus        65 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~  144 (427)
T 4f6c_A           65 SHRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDD  144 (427)
T ss_dssp             CCCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CC
T ss_pred             CCCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCccc
Confidence            4566889999999999999999999999999999999887   33333333322         23578999999999887


Q ss_pred             HHHHHHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccccc
Q 024230           84 RQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVS  163 (270)
Q Consensus        84 ~~~~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~  163 (270)
                      +.        .+ +++|+|||||+...       ..+++++.+++|+.++.++++++.+     +..+||++||..+ ..
T Consensus       145 l~--------~~-~~~d~Vih~A~~~~-------~~~~~~~~~~~Nv~g~~~l~~aa~~-----~~~~~v~~SS~~~-G~  202 (427)
T 4f6c_A          145 VV--------LP-ENMDTIIHAGARTD-------HFGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISV-GT  202 (427)
T ss_dssp             CC--------CS-SCCSEEEECCCCC--------------CHHHHHHHHHHHHHHHHHH-----TTCEEEEEEEGGG-GS
T ss_pred             CC--------Cc-CCCCEEEECCcccC-------CCCCHHHHHHHHHHHHHHHHHHHHh-----cCCcEEEECchHh-CC
Confidence            76        23 78999999999753       2346778899999999999999865     3579999999887 11


Q ss_pred             -------------------CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC-------hhh
Q 024230          164 -------------------ANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN-------GKF  217 (270)
Q Consensus       164 -------------------~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~-------~~~  217 (270)
                                         ......|+.+|++.+.+++.++.    .|++++.+.||.+..+........       ...
T Consensus       203 ~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~  278 (427)
T 4f6c_A          203 YFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMV  278 (427)
T ss_dssp             EECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH----TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHH
T ss_pred             CccCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH----cCCCEEEEeCCeeecCCCCCccccCcchHHHHHH
Confidence                               22567899999999999998753    689999999999998865543211       122


Q ss_pred             HHHHhhcCC--------CCCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCcccccc
Q 024230          218 VDEVKSRTP--------MGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNGF  267 (270)
Q Consensus       218 ~~~~~~~~~--------~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~  267 (270)
                      ........+        ...+..++|+|+++++++....   .|+++++++|..+.+-
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~~---~g~~~~l~~~~~~s~~  333 (427)
T 4f6c_A          279 MNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSPNKMPVK  333 (427)
T ss_dssp             HHHHHHSSEEEHHHHTCEECCEEHHHHHHHHHHHTTSCC---CCSEEEESCSCCEEHH
T ss_pred             HHHHHhcCCCCCccccceEEEeeHHHHHHHHHHHHcCCC---CCCEEEecCCCCCcHH
Confidence            222222211        2235678999999999997543   8999999999876553

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.91  E-value=3.2e-24  Score=186.95  Aligned_cols=242  Identities=16%  Similarity=0.056  Sum_probs=180.3

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHH-HCCCeEEEeeCChh------------HHHHHHHHHHhcCCeEEEEEccCCCH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELS-MLGATVHTCSRTET------------ELNECIHHLQMKGLKVTGSVCDVSSR   81 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~-~~G~~v~l~~r~~~------------~~~~~~~~~~~~~~~~~~~~~D~~~~   81 (270)
                      ...+.+|++||||+|+|||++++..|+ +.|+.++++++..+            ..+.+.+.+++.|.+...+.||++++
T Consensus        45 ~~~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~  124 (401)
T 4ggo_A           45 AGAKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSD  124 (401)
T ss_dssp             TTSCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSH
T ss_pred             cccCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCH
Confidence            346789999999999999999999999 78999999987643            23456677788899999999999999


Q ss_pred             HHHHHHHHHHHHHcCCcccEEEECCCCCCC-------------CCC---------------------CCCCHHHHHHHHH
Q 024230           82 PQRQTLINTVSSLFNGKLNIFVNNVGTSVL-------------KPT---------------------LEYNAEDFSLVMS  127 (270)
Q Consensus        82 ~~~~~~~~~i~~~~~~~id~li~~ag~~~~-------------~~~---------------------~~~~~~~~~~~~~  127 (270)
                      ++++++++++.+.+ |++|+|||+++....             +|+                     ...+.++++.+..
T Consensus       125 e~i~~vi~~i~~~~-G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~  203 (401)
T 4ggo_A          125 EIKAQVIEEAKKKG-IKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVK  203 (401)
T ss_dssp             HHHHHHHHHHHHTT-CCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhc-CCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHH
Confidence            99999999999998 899999999997521             111                     1235666666555


Q ss_pred             H---hhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCC--hhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCc
Q 024230          128 T---NFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG--TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWY  202 (270)
Q Consensus       128 ~---n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~--~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~  202 (270)
                      +   ..++.+...+...+.|.+  +++++.+|+..+..-.|.+  ..+|++|++|+..+|.|+.+|+  +++++++++|.
T Consensus       204 vMg~s~~s~w~~al~~a~lla~--G~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~eL~--~~~a~v~v~~a  279 (401)
T 4ggo_A          204 VMGGEDWERWIKQLSKEGLLEE--GCITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLNKENP--SIRAFVSVNKG  279 (401)
T ss_dssp             HHSSHHHHHHHHHHHHTTCEEE--EEEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHHHCT--TEEEEEEECCC
T ss_pred             HHhhhHHHHHHHHHHhhhcccC--CceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHHHhcC--CCcEEEEEcCc
Confidence            5   455566666666666643  5899999998886655543  4789999999999999999997  48999999999


Q ss_pred             ccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCccc
Q 024230          203 IRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTV  264 (270)
Q Consensus       203 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~  264 (270)
                      +.|.-...+...+-+..-+..  -++..+..|.+.+.+.+|..+. -|-++..+.+|...++
T Consensus       280 ~vT~AssaIP~~ply~~~l~k--vmk~~g~heg~ieq~~rl~~~~-ly~~~~~~~~D~~~r~  338 (401)
T 4ggo_A          280 LVTRASAVIPVIPLYLASLFK--VMKEKGNHEGCIEQITRLYAER-LYRKDGTIPVDEENRI  338 (401)
T ss_dssp             CCCTTGGGSSSHHHHHHHHHH--HHHHHTCCCCHHHHHHHHHHHT-TSCTTCCCCCCTTSCE
T ss_pred             cccchhhcCCCchHHHHHHHH--HHHhcCCCCchHHHHHHHHHHh-hccCCCCCCcCCCCCc
Confidence            999988777554444332211  2344556777888888887542 2223334556765444

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.91  E-value=7.1e-24  Score=188.06  Aligned_cols=224  Identities=15%  Similarity=0.085  Sum_probs=163.9

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCC-CeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLG-ATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G-~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      +.+++|+|+||||+|+||++++++|+++| ++|++++|+.+...+.   +. ...++.++.+|++|++++++++      
T Consensus        28 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~---l~-~~~~v~~~~~Dl~d~~~l~~~~------   97 (377)
T 2q1s_A           28 SKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKIN---VP-DHPAVRFSETSITDDALLASLQ------   97 (377)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGG---SC-CCTTEEEECSCTTCHHHHHHCC------
T ss_pred             HHhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhh---cc-CCCceEEEECCCCCHHHHHHHh------
Confidence            45789999999999999999999999999 9999999986542111   11 1346888999999988776655      


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEecCccccc-----------
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRAS-GAASIVLMSSALGIV-----------  162 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~ii~iss~~~~~-----------  162 (270)
                        .++|++||+|+.....    .+.+++++.+++|+.++.++++++    .+. +.++||++||...+.           
T Consensus        98 --~~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E  167 (377)
T 2q1s_A           98 --DEYDYVFHLATYHGNQ----SSIHDPLADHENNTLTTLKLYERL----KHFKRLKKVVYSAAGCSIAEKTFDDAKATE  167 (377)
T ss_dssp             --SCCSEEEECCCCSCHH----HHHHCHHHHHHHHTHHHHHHHHHH----TTCSSCCEEEEEEEC--------------C
T ss_pred             --hCCCEEEECCCccCch----hhhhCHHHHHHHHHHHHHHHHHHH----HHhCCCCeEEEeCCHHHcCCCCCCCcCccc
Confidence              4799999999974321    234567889999999999999888    444 557999999976432           


Q ss_pred             -----cC-CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCC---------ccc---cC-ChhhHHHHhh
Q 024230          163 -----SA-NVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFT---------EPL---LG-NGKFVDEVKS  223 (270)
Q Consensus       163 -----~~-~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~---------~~~---~~-~~~~~~~~~~  223 (270)
                           +. .....|+.+|.+.+.+++.++.++   |++++.+.||.+..+..         ...   .. ...+...+..
T Consensus       168 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  244 (377)
T 2q1s_A          168 ETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH---QLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALK  244 (377)
T ss_dssp             CCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHT
T ss_pred             ccccccccCCCCchHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHc
Confidence                 11 335679999999999999998775   79999999999998765         210   00 1122333333


Q ss_pred             cCCCC---------CCCChHhHHHH-HHHHhCCCCCCccCcEEeecCCccccc
Q 024230          224 RTPMG---------RLGEPKEVSSL-VAFLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       224 ~~~~~---------~~~~~~dva~~-~~~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                      ..+..         .+..++|++++ +++++....   +| ++++.+|..++.
T Consensus       245 g~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~~~---~g-~~~i~~~~~~s~  293 (377)
T 2q1s_A          245 GMPLPLENGGVATRDFIFVEDVANGLIACAADGTP---GG-VYNIASGKETSI  293 (377)
T ss_dssp             TCCCCCSGGGCCEECCEEHHHHHHHHHHHHHHCCT---TE-EEECCCCCCEEH
T ss_pred             CCCeEEeCCCCeEEeeEEHHHHHHHHHHHHHhcCC---CC-eEEecCCCceeH
Confidence            32221         23458999999 999987532   78 999999876543

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.91  E-value=4.5e-24  Score=224.52  Aligned_cols=177  Identities=18%  Similarity=0.167  Sum_probs=143.3

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCe-EEEeeCChhH---HHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGAT-VHTCSRTETE---LNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~-v~l~~r~~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .+|++|||||++|||+++|++|+++|++ |++++|+..+   .++..+++...+.++.++.+|++|.++++++++++.+ 
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~- 1961 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQ- 1961 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHh-
Confidence            7899999999999999999999999997 8889998643   3455666666788999999999999999999999874 


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                      + +++|++|||||+....++.+++.++|++++++|+.|++++.+++.+.|.+.  |+||++||.++..+.+++..|++||
T Consensus      1962 ~-g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~--g~iV~iSS~ag~~g~~g~~~Y~aaK 2038 (2512)
T 2vz8_A         1962 L-GPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPEL--DYFVIFSSVSCGRGNAGQANYGFAN 2038 (2512)
T ss_dssp             H-SCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTC--CEEEEECCHHHHTTCTTCHHHHHHH
T ss_pred             c-CCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccC--CEEEEecchhhcCCCCCcHHHHHHH
Confidence            5 799999999999888889999999999999999999999999999988653  7999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcc
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYI  203 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v  203 (270)
                      +++++|++.+..+    |++..++.+|.+
T Consensus      2039 aal~~l~~~rr~~----Gl~~~a~~~g~~ 2063 (2512)
T 2vz8_A         2039 SAMERICEKRRHD----GLPGLAVQWGAI 2063 (2512)
T ss_dssp             HHHHHHHHHHHHT----TSCCCEEEECCB
T ss_pred             HHHHHHHHHHHHC----CCcEEEEEccCc
Confidence            9999999987654    788888887755

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.91  E-value=7.8e-24  Score=185.41  Aligned_cols=219  Identities=15%  Similarity=0.078  Sum_probs=158.1

Q ss_pred             cccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           13 QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        13 ~~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      ....++++|+||||||+|+||.+++++|+++|++|++++|+++.            .++.++.+|++|.+++.+++    
T Consensus        12 ~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~------------~~~~~~~~Dl~d~~~~~~~~----   75 (347)
T 4id9_A           12 SGLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG------------TGGEEVVGSLEDGQALSDAI----   75 (347)
T ss_dssp             ---------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS------------SCCSEEESCTTCHHHHHHHH----
T ss_pred             CcccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC------------CCccEEecCcCCHHHHHHHH----
Confidence            34578899999999999999999999999999999999998764            35677899999999888777    


Q ss_pred             HHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccccc---------
Q 024230           93 SLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVS---------  163 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~---------  163 (270)
                          .++|++||+|+....      +.+.+++.+++|+.++.++++++    .+.+.++||++||...+..         
T Consensus        76 ----~~~d~vih~A~~~~~------~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~V~~SS~~vyg~~~~~~~~~~  141 (347)
T 4id9_A           76 ----MGVSAVLHLGAFMSW------APADRDRMFAVNVEGTRRLLDAA----SAAGVRRFVFASSGEVYPENRPEFLPVT  141 (347)
T ss_dssp             ----TTCSEEEECCCCCCS------SGGGHHHHHHHHTHHHHHHHHHH----HHTTCSEEEEEEEGGGTTTTSCSSSSBC
T ss_pred             ----hCCCEEEECCcccCc------chhhHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEECCHHHhCCCCCCCCCcC
Confidence                479999999997543      33445889999999999999888    4455679999999766543         


Q ss_pred             ----CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCC----ccccCC----------------hhh--
Q 024230          164 ----ANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFT----EPLLGN----------------GKF--  217 (270)
Q Consensus       164 ----~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~----~~~~~~----------------~~~--  217 (270)
                          ......|+.+|.+.+.+++.++.+   .+++++.+.|+.+.++..    ..+...                ...  
T Consensus       142 E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~  218 (347)
T 4id9_A          142 EDHPLCPNSPYGLTKLLGEELVRFHQRS---GAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIA  218 (347)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHH---SSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHH
T ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHh---cCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHH
Confidence                123567999999999999999877   489999999998872100    000000                011  


Q ss_pred             --HHHHhhcCC---------CCCC----CChHhHHHHHHHHhCCCCCCccCcEEeecCCccccc
Q 024230          218 --VDEVKSRTP---------MGRL----GEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       218 --~~~~~~~~~---------~~~~----~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                        ........+         ...+    ..++|+++++++++....  ..|+++++.+|..++.
T Consensus       219 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~--~~~~~~ni~~~~~~s~  280 (347)
T 4id9_A          219 ELLQSRDIGEPSHILARNENGRPFRMHITDTRDMVAGILLALDHPE--AAGGTFNLGADEPADF  280 (347)
T ss_dssp             HHHHHHCCSSCCEEEEECTTCCBCEECEEEHHHHHHHHHHHHHCGG--GTTEEEEESCSSCEEH
T ss_pred             HHHHHHHcCCCeEEeCCCCcccCCccCcEeHHHHHHHHHHHhcCcc--cCCCeEEECCCCcccH
Confidence              111111111         1223    678999999999996532  4589999999876654

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.91  E-value=1.8e-23  Score=185.68  Aligned_cols=223  Identities=16%  Similarity=0.093  Sum_probs=165.8

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      ++.++|+||||||+|+||++++++|+++|++|++++|+++.....      ...++.++.+|++|.+++.+++       
T Consensus        25 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~v~~~~~Dl~d~~~~~~~~-------   91 (379)
T 2c5a_A           25 WPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE------DMFCDEFHLVDLRVMENCLKVT-------   91 (379)
T ss_dssp             CTTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG------GGTCSEEEECCTTSHHHHHHHH-------
T ss_pred             ccccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh------ccCCceEEECCCCCHHHHHHHh-------
Confidence            455778999999999999999999999999999999986543211      1235778899999998888776       


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccccc------------
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVS------------  163 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~------------  163 (270)
                       .++|++||+|+......+   +.+++++.+++|+.++.++++++.    +.+.++||++||...+..            
T Consensus        92 -~~~d~Vih~A~~~~~~~~---~~~~~~~~~~~Nv~g~~~ll~a~~----~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~  163 (379)
T 2c5a_A           92 -EGVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMIEAAR----INGIKRFFYASSACIYPEFKQLETTNVSLK  163 (379)
T ss_dssp             -TTCSEEEECCCCCCCHHH---HTTCHHHHHHHHHHHHHHHHHHHH----HTTCSEEEEEEEGGGSCGGGSSSSSSCEEC
T ss_pred             -CCCCEEEECceecCcccc---cccCHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEEeehheeCCCCCCCccCCCcC
Confidence             478999999997532111   123467889999999999999884    445579999999876542            


Q ss_pred             ------CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC----hhhHHHHhhcCC-------
Q 024230          164 ------ANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN----GKFVDEVKSRTP-------  226 (270)
Q Consensus       164 ------~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~----~~~~~~~~~~~~-------  226 (270)
                            ......|+.+|.+.+.+++.++.+.   |++++.+.||.+.++........    ..+...+....+       
T Consensus       164 E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  240 (379)
T 2c5a_A          164 ESDAWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGD  240 (379)
T ss_dssp             GGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESC
T ss_pred             cccCCCCCCCChhHHHHHHHHHHHHHHHHHH---CCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCC
Confidence                  2234679999999999999998764   79999999999998865332111    122222222211       


Q ss_pred             ---CCCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCccccc
Q 024230          227 ---MGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       227 ---~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                         ...+..++|+++++++++...    .|+++++.+|..++.
T Consensus       241 g~~~~~~i~v~Dva~ai~~~l~~~----~~~~~ni~~~~~~s~  279 (379)
T 2c5a_A          241 GLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVSM  279 (379)
T ss_dssp             SCCEECCEEHHHHHHHHHHHHHSS----CCSCEEECCCCCEEH
T ss_pred             CCeeEEEEEHHHHHHHHHHHhhcc----CCCeEEeCCCCccCH
Confidence               123556999999999999653    578899998876544

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.91  E-value=6.6e-24  Score=185.84  Aligned_cols=221  Identities=17%  Similarity=0.113  Sum_probs=163.4

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHC--CCeEEEeeCChhH-HHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           21 MTALVTGGTKGLGLAVVEELSML--GATVHTCSRTETE-LNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~--G~~v~l~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      |+||||||+|+||++++++|+++  |++|++++|+... ..+....+  .+.++.++.+|++|.+++.+++        .
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~--------~   74 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI--LGDRVELVVGDIADAELVDKLA--------A   74 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG--CSSSEEEEECCTTCHHHHHHHH--------T
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhh--ccCCeEEEECCCCCHHHHHHHh--------h
Confidence            68999999999999999999999  8999999996531 11111111  1246888999999998888777        4


Q ss_pred             cccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccccc--------------
Q 024230           98 KLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVS--------------  163 (270)
Q Consensus        98 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~--------------  163 (270)
                      .+|++|||||....    +.+.+++++.+++|+.++.++++++.+.    + .+||++||...+..              
T Consensus        75 ~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~-~~~v~~SS~~vyg~~~~~~~~~~~~~~~  145 (348)
T 1oc2_A           75 KADAIVHYAAESHN----DNSLNDPSPFIHTNFIGTYTLLEAARKY----D-IRFHHVSTDEVYGDLPLREDLPGHGEGP  145 (348)
T ss_dssp             TCSEEEECCSCCCH----HHHHHCCHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGGCCBCCGGGSTTTTCST
T ss_pred             cCCEEEECCcccCc----cchhhCHHHHHHHHHHHHHHHHHHHHHh----C-CeEEEecccceeCCCccccccccccccc
Confidence            57999999997532    1234566789999999999999999654    3 39999999865421              


Q ss_pred             ---------CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCC--------
Q 024230          164 ---------ANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTP--------  226 (270)
Q Consensus       164 ---------~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~--------  226 (270)
                               .+....|+.+|++.+.+++.++.++   |++++.+.||.+.++..........+........+        
T Consensus       146 ~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (348)
T 1oc2_A          146 GEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGK  222 (348)
T ss_dssp             TSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSC
T ss_pred             CCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCC
Confidence                     2234689999999999999998876   79999999999998865321001122222222211        


Q ss_pred             -CCCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCccccc
Q 024230          227 -MGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       227 -~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                       ...+..++|+++++++++...   .+|+++++++|..+..
T Consensus       223 ~~~~~i~v~Dva~~~~~~~~~~---~~g~~~~i~~~~~~s~  260 (348)
T 1oc2_A          223 NVRDWIHTNDHSTGVWAILTKG---RMGETYLIGADGEKNN  260 (348)
T ss_dssp             CEEECEEHHHHHHHHHHHHHHC---CTTCEEEECCSCEEEH
T ss_pred             ceEeeEEHHHHHHHHHHHhhCC---CCCCeEEeCCCCCCCH
Confidence             124567999999999999643   4799999999976543

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.91  E-value=2.3e-23  Score=181.82  Aligned_cols=219  Identities=18%  Similarity=0.152  Sum_probs=151.4

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhc---CCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK---GLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      |.+++|+||||||+|+||++++++|+++|++|+++.|+.+...+... +...   ..++.++.+|++|.+++.+++    
T Consensus         1 ~~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~----   75 (337)
T 2c29_D            1 MGSQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKH-LLDLPKAETHLTLWKADLADEGSFDEAI----   75 (337)
T ss_dssp             -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHH-HHTSTTHHHHEEEEECCTTSTTTTHHHH----
T ss_pred             CCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHH-HHhcccCCCeEEEEEcCCCCHHHHHHHH----
Confidence            34578999999999999999999999999999999998764333221 1111   125788899999998887776    


Q ss_pred             HHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCC-------
Q 024230           93 SLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSAN-------  165 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~-------  165 (270)
                          ..+|++||+|+...   ....++  .++.+++|+.++.++++++.+..   ..++||++||..++.+.+       
T Consensus        76 ----~~~d~Vih~A~~~~---~~~~~~--~~~~~~~nv~gt~~ll~a~~~~~---~~~riV~~SS~~~~~~~~~~~~~~~  143 (337)
T 2c29_D           76 ----KGCTGVFHVATPMD---FESKDP--ENEVIKPTIEGMLGIMKSCAAAK---TVRRLVFTSSAGTVNIQEHQLPVYD  143 (337)
T ss_dssp             ----TTCSEEEECCCCCC---SSCSSH--HHHTHHHHHHHHHHHHHHHHHHS---CCCEEEEECCGGGTSCSSSCCSEEC
T ss_pred             ----cCCCEEEEeccccC---CCCCCh--HHHHHHHHHHHHHHHHHHHHhCC---CccEEEEeeeHhhcccCCCCCcccC
Confidence                46899999998642   222222  34689999999999999986532   247999999987644221       


Q ss_pred             ---------------CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHH---Hh-----
Q 024230          166 ---------------VGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDE---VK-----  222 (270)
Q Consensus       166 ---------------~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~---~~-----  222 (270)
                                     ....|+.||.+.+.+++.++.+   .|++++.+.|+.+.++....... ......   +.     
T Consensus       144 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~~~~~~-~~~~~~~~~~~g~~~~  219 (337)
T 2c29_D          144 ESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKE---NNIDFITIIPTLVVGPFIMSSMP-PSLITALSPITGNEAH  219 (337)
T ss_dssp             TTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---HTCCEEEEEECEEESCCSCSSCC-HHHHHHTHHHHTCGGG
T ss_pred             cccCCchhhhcccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCC-chHHHHHHHHcCCCcc
Confidence                           2236999999999998887654   48999999999999986543211 111000   00     


Q ss_pred             -hcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEEe
Q 024230          223 -SRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVC  257 (270)
Q Consensus       223 -~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~  257 (270)
                       ...+..++..++|+++++++++...  ...|..+.
T Consensus       220 ~~~~~~~~~i~v~Dva~a~~~~~~~~--~~~~~~~~  253 (337)
T 2c29_D          220 YSIIRQGQFVHLDDLCNAHIYLFENP--KAEGRYIC  253 (337)
T ss_dssp             HHHHTEEEEEEHHHHHHHHHHHHHCT--TCCEEEEE
T ss_pred             ccccCCCCEEEHHHHHHHHHHHhcCc--ccCceEEE
Confidence             0011234678999999999998642  23555433

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.91  E-value=3.6e-23  Score=181.18  Aligned_cols=231  Identities=14%  Similarity=0.110  Sum_probs=163.2

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhH------HHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETE------LNECIHHLQM-KGLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~------~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      +|+||||||+|+||++++++|+++|++|++++|+...      ..+..+.+.. .+.++.++.+|+++.+++++++++  
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~--   79 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK--   79 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH--
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHh--
Confidence            5899999999999999999999999999999885432      1122222322 245678899999999998888754  


Q ss_pred             HHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccccc---------
Q 024230           93 SLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVS---------  163 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~---------  163 (270)
                          .++|++||+||......    +.+++++.+++|+.++.++++++    .+.+.++||++||...+..         
T Consensus        80 ----~~~d~vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~SS~~~~g~~~~~~~~E~  147 (348)
T 1ek6_A           80 ----YSFMAVIHFAGLKAVGE----SVQKPLDYYRVNLTGTIQLLEIM----KAHGVKNLVFSSSATVYGNPQYLPLDEA  147 (348)
T ss_dssp             ----CCEEEEEECCSCCCHHH----HHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGGCSCSSSSBCTT
T ss_pred             ----cCCCEEEECCCCcCccc----hhhchHHHHHHHHHHHHHHHHHH----HHhCCCEEEEECcHHHhCCCCCCCcCCC
Confidence                27999999999753221    34567889999999999998876    4455679999999876532         


Q ss_pred             ---CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC------ChhhHH----HHh-hcCC---
Q 024230          164 ---ANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG------NGKFVD----EVK-SRTP---  226 (270)
Q Consensus       164 ---~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~------~~~~~~----~~~-~~~~---  226 (270)
                         .|....|+.+|++.+.+++.++.+  ..++++..+.|+.+..+.......      ......    ... ...+   
T Consensus       148 ~~~~p~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (348)
T 1ek6_A          148 HPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNV  225 (348)
T ss_dssp             SCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEE
T ss_pred             CCCCCCCCchHHHHHHHHHHHHHHHhc--CCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEE
Confidence               122568999999999999999887  346999999999888763211111      011111    111 1111   


Q ss_pred             ------------CCCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCccccc
Q 024230          227 ------------MGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       227 ------------~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                                  ...+..++|++++++.++........++++++.+|..++.
T Consensus       226 ~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~  277 (348)
T 1ek6_A          226 FGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSV  277 (348)
T ss_dssp             ECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEH
T ss_pred             eCCcccCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCccH
Confidence                        1134568999999998885321122248999988866543

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.91  E-value=5.8e-24  Score=183.59  Aligned_cols=218  Identities=17%  Similarity=0.147  Sum_probs=159.6

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      ++||||||+|+||++++++|+++|++|++++|..+....      .....+.++.+|++|.+++++++++      .++|
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~------~~~~~~~~~~~Dl~~~~~~~~~~~~------~~~d   68 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE------NVPKGVPFFRVDLRDKEGVERAFRE------FRPT   68 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG------GSCTTCCEECCCTTCHHHHHHHHHH------HCCS
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh------hcccCeEEEECCCCCHHHHHHHHHh------cCCC
Confidence            379999999999999999999999999999985432111      1112466788999999998888764      2689


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCc-ccccc------------CCCC
Q 024230          101 IFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSA-LGIVS------------ANVG  167 (270)
Q Consensus       101 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~-~~~~~------------~~~~  167 (270)
                      ++||+|+....    ..+.+++++.+++|+.+++++++++.    +.+.++||++||. ..+..            ....
T Consensus        69 ~vi~~a~~~~~----~~~~~~~~~~~~~N~~g~~~l~~a~~----~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~  140 (311)
T 2p5y_A           69 HVSHQAAQASV----KVSVEDPVLDFEVNLLGGLNLLEACR----QYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPK  140 (311)
T ss_dssp             EEEECCSCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHH----HTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCC
T ss_pred             EEEECccccCc----hhhhhCHHHHHHHHHHHHHHHHHHHH----HhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCC
Confidence            99999997432    12456678899999999999999884    4455799999998 32211            1134


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC---hhhHHHHhhcCC--------------CCCC
Q 024230          168 TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN---GKFVDEVKSRTP--------------MGRL  230 (270)
Q Consensus       168 ~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~---~~~~~~~~~~~~--------------~~~~  230 (270)
                      ..|+.||++++.+++.++.++   |++++.+.|+.+.++........   ..+...+....+              ...+
T Consensus       141 ~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  217 (311)
T 2p5y_A          141 SPYAASKAAFEHYLSVYGQSY---GLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDY  217 (311)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECE
T ss_pred             ChHHHHHHHHHHHHHHHHHHc---CCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEee
Confidence            689999999999999998875   79999999999999865332111   112222222211              1234


Q ss_pred             CChHhHHHHHHHHhCCCCCCccCcEEeecCCccccc
Q 024230          231 GEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       231 ~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                      ..++|+++++++++...     |+++++++|..++.
T Consensus       218 i~v~Dva~a~~~~~~~~-----~~~~~i~~~~~~s~  248 (311)
T 2p5y_A          218 VYVGDVAEAHALALFSL-----EGIYNVGTGEGHTT  248 (311)
T ss_dssp             EEHHHHHHHHHHHHHHC-----CEEEEESCSCCEEH
T ss_pred             EEHHHHHHHHHHHHhCC-----CCEEEeCCCCCccH
Confidence            56899999999998642     89999999876543

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.91  E-value=2.7e-24  Score=185.60  Aligned_cols=218  Identities=16%  Similarity=0.111  Sum_probs=162.1

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      |+||||||+|+||++++++|+++|++|++++|+.+.....      ....+.++.+|++|.+ +.+++        .. |
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~~~~~~~Dl~d~~-~~~~~--------~~-d   64 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREF------VNPSAELHVRDLKDYS-WGAGI--------KG-D   64 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGG------SCTTSEEECCCTTSTT-TTTTC--------CC-S
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhh------cCCCceEEECccccHH-HHhhc--------CC-C
Confidence            5799999999999999999999999999999977643221      1346778899999976 55444        33 9


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC-----------CCChh
Q 024230          101 IFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA-----------NVGTV  169 (270)
Q Consensus       101 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~-----------~~~~~  169 (270)
                      ++||+|+....    ..+.+++++.+++|+.++.++++++.    +.+.++||++||...+...           .....
T Consensus        65 ~vih~A~~~~~----~~~~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~  136 (312)
T 3ko8_A           65 VVFHFAANPEV----RLSTTEPIVHFNENVVATFNVLEWAR----QTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISV  136 (312)
T ss_dssp             EEEECCSSCSS----SGGGSCHHHHHHHHHHHHHHHHHHHH----HHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSH
T ss_pred             EEEECCCCCCc----hhhhhCHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCCh
Confidence            99999996432    23455677889999999999999883    4456799999998776432           23568


Q ss_pred             hhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhc-CC---------CCCCCChHhHHHH
Q 024230          170 YSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSR-TP---------MGRLGEPKEVSSL  239 (270)
Q Consensus       170 y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~-~~---------~~~~~~~~dva~~  239 (270)
                      |+.+|.+.+.+++.++.++   |++++.+.||.+.++...... ...+...+... .+         ...+..++|++++
T Consensus       137 Y~~sK~~~e~~~~~~~~~~---g~~~~~lrp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a  212 (312)
T 3ko8_A          137 YGAAKAAGEVMCATYARLF---GVRCLAVRYANVVGPRLRHGV-IYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEA  212 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCSSH-HHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHh---CCCEEEEeeccccCcCCCCCh-HHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHH
Confidence            9999999999999999886   899999999999998654210 11222222221 11         1234459999999


Q ss_pred             HHHHhCC-CCCCccCcEEeecCCccccc
Q 024230          240 VAFLCMP-AASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       240 ~~~l~s~-~~~~~~G~~i~vdgG~~~~~  266 (270)
                      +++++.. ......|+++++.+|..++.
T Consensus       213 ~~~~~~~~~~~~~~~~~~ni~~~~~~s~  240 (312)
T 3ko8_A          213 TLAAWKKFEEMDAPFLALNVGNVDAVRV  240 (312)
T ss_dssp             HHHHHHHHHHSCCSEEEEEESCSSCEEH
T ss_pred             HHHHHHhccccCCCCcEEEEcCCCceeH
Confidence            9999864 12345789999999876553

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.91  E-value=1.1e-22  Score=181.38  Aligned_cols=173  Identities=16%  Similarity=0.126  Sum_probs=136.6

Q ss_pred             CCEEEEecCCCcHHHHHHHHHH-HCCCeEEEeeCChhH---------HHHHHHHHHhcC-----Ce---EEEEEccCCCH
Q 024230           20 GMTALVTGGTKGLGLAVVEELS-MLGATVHTCSRTETE---------LNECIHHLQMKG-----LK---VTGSVCDVSSR   81 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~-~~G~~v~l~~r~~~~---------~~~~~~~~~~~~-----~~---~~~~~~D~~~~   81 (270)
                      +++||||||+|+||++++++|+ ++|++|++++|+...         .+.+.+.++...     .+   +.++.+|++|.
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            4689999999999999999999 999999999987654         333333333321     23   88899999999


Q ss_pred             HHHHHHHHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccc
Q 024230           82 PQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGI  161 (270)
Q Consensus        82 ~~~~~~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~  161 (270)
                      +++.+++++    + +++|++||||+.....    .+.+++++.+++|+.+++++++++    .+.+.++||++||...+
T Consensus        82 ~~~~~~~~~----~-~~~d~vih~A~~~~~~----~~~~~~~~~~~~Nv~g~~~ll~a~----~~~~~~~iv~~SS~~v~  148 (397)
T 1gy8_A           82 DFLNGVFTR----H-GPIDAVVHMCAFLAVG----ESVRDPLKYYDNNVVGILRLLQAM----LLHKCDKIIFSSSAAIF  148 (397)
T ss_dssp             HHHHHHHHH----S-CCCCEEEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGT
T ss_pred             HHHHHHHHh----c-CCCCEEEECCCccCcC----cchhhHHHHHHHHhHHHHHHHHHH----HHhCCCEEEEECCHHHh
Confidence            998887754    3 5699999999975422    134567889999999999999886    44556799999997655


Q ss_pred             ccCC------------------CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCC
Q 024230          162 VSAN------------------VGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFT  208 (270)
Q Consensus       162 ~~~~------------------~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~  208 (270)
                      ....                  ....|+.||++.+.+++.++.++   |++++.+.|+.+..+..
T Consensus       149 g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilRp~~v~G~~~  210 (397)
T 1gy8_A          149 GNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAHE  210 (397)
T ss_dssp             BSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCCT
T ss_pred             CCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH---CCcEEEEeccceeCCCc
Confidence            3322                  14689999999999999999886   89999999999987753

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.90  E-value=1.2e-23  Score=183.58  Aligned_cols=222  Identities=16%  Similarity=0.144  Sum_probs=162.1

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHC---C---CeEEEeeCChhH--HHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           21 MTALVTGGTKGLGLAVVEELSML---G---ATVHTCSRTETE--LNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~---G---~~v~l~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      ++||||||+|+||++++++|+++   |   ++|++++|+...  .+.+ ..+. .+.++.++.+|++|.+++++++    
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~----   74 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANL-APVD-ADPRLRFVHGDIRDAGLLAREL----   74 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGG-GGGT-TCTTEEEEECCTTCHHHHHHHT----
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhh-hhcc-cCCCeEEEEcCCCCHHHHHHHh----
Confidence            36999999999999999999997   8   999999986421  1111 1111 1346888999999998877766    


Q ss_pred             HHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccccc---------
Q 024230           93 SLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVS---------  163 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~---------  163 (270)
                          .++|++||||+....    +.+.+++++.+++|+.++.++++++.+.    +.++||++||...+..         
T Consensus        75 ----~~~d~Vih~A~~~~~----~~~~~~~~~~~~~Nv~~~~~l~~a~~~~----~~~~~v~~SS~~vyg~~~~~~~~E~  142 (337)
T 1r6d_A           75 ----RGVDAIVHFAAESHV----DRSIAGASVFTETNVQGTQTLLQCAVDA----GVGRVVHVSTNQVYGSIDSGSWTES  142 (337)
T ss_dssp             ----TTCCEEEECCSCCCH----HHHHHCCHHHHHHHTHHHHHHHHHHHHT----TCCEEEEEEEGGGGCCCSSSCBCTT
T ss_pred             ----cCCCEEEECCCccCc----hhhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEecchHHhCCCCCCCCCCC
Confidence                579999999997532    1234556788999999999999998653    4579999999865432         


Q ss_pred             --CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCC---------CCCCCC
Q 024230          164 --ANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTP---------MGRLGE  232 (270)
Q Consensus       164 --~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~  232 (270)
                        .+....|+.+|++.+.+++.++.++   |++++.+.||.+.++..........+........+         ...+..
T Consensus       143 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  219 (337)
T 1r6d_A          143 SPLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVH  219 (337)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEE
T ss_pred             CCCCCCCchHHHHHHHHHHHHHHHHHH---CCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEe
Confidence              2345689999999999999998875   79999999999998865321001122222222211         123456


Q ss_pred             hHhHHHHHHHHhCCCCCCccCcEEeecCCccccc
Q 024230          233 PKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       233 ~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                      ++|+++++++++...   .+|+++++++|..++.
T Consensus       220 v~Dva~a~~~~~~~~---~~g~~~~v~~~~~~s~  250 (337)
T 1r6d_A          220 TDDHCRGIALVLAGG---RAGEIYHIGGGLELTN  250 (337)
T ss_dssp             HHHHHHHHHHHHHHC---CTTCEEEECCCCEEEH
T ss_pred             HHHHHHHHHHHHhCC---CCCCEEEeCCCCCccH
Confidence            899999999998643   3799999999976543

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.90  E-value=6.4e-24  Score=183.48  Aligned_cols=215  Identities=13%  Similarity=0.055  Sum_probs=157.8

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      |+||||||+|+||++++++|+++|+.|++..++....+.       ....+.++.+|+++ +++.+++        .++|
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~-------~~~~~~~~~~Dl~~-~~~~~~~--------~~~d   65 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEF-------VNEAARLVKADLAA-DDIKDYL--------KGAE   65 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGG-------SCTTEEEECCCTTT-SCCHHHH--------TTCS
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhh-------cCCCcEEEECcCCh-HHHHHHh--------cCCC
Confidence            589999999999999999999999555555554433211       13468889999998 8777766        4799


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccc-----------cCCCChh
Q 024230          101 IFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIV-----------SANVGTV  169 (270)
Q Consensus       101 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~-----------~~~~~~~  169 (270)
                      ++||+|+....    ..+.+++++.+++|+.++.++++++    .+.+.++||++||...+.           +......
T Consensus        66 ~vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~  137 (313)
T 3ehe_A           66 EVWHIAANPDV----RIGAENPDEIYRNNVLATYRLLEAM----RKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISL  137 (313)
T ss_dssp             EEEECCCCCCC----C-CCCCHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSH
T ss_pred             EEEECCCCCCh----hhhhhCHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCH
Confidence            99999996422    3345567888999999999998886    445567999999987763           2234567


Q ss_pred             hhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhc-C---------CCCCCCChHhHHHH
Q 024230          170 YSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSR-T---------PMGRLGEPKEVSSL  239 (270)
Q Consensus       170 y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~-~---------~~~~~~~~~dva~~  239 (270)
                      |+.+|.+.+.+++.++.++   |++++.+.|+.+..+...... ...+....... .         ....+..++|++++
T Consensus       138 Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a  213 (313)
T 3ehe_A          138 YGASKLACEALIESYCHTF---DMQAWIYRFANVIGRRSTHGV-IYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDA  213 (313)
T ss_dssp             HHHHHHHHHHHHHHHHHHT---TCEEEEEECSCEESTTCCCSH-HHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhc---CCCEEEEeeccccCcCCCcCh-HHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHH
Confidence            9999999999999999875   899999999999887543210 11222222211 1         12235678999999


Q ss_pred             HHHHhCCCCCCccCcEEeecCCccccc
Q 024230          240 VAFLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       240 ~~~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                      +++++.+   ...|+++++.+|..++.
T Consensus       214 ~~~~~~~---~~~~~~~ni~~~~~~s~  237 (313)
T 3ehe_A          214 MLFGLRG---DERVNIFNIGSEDQIKV  237 (313)
T ss_dssp             HHHHTTC---CSSEEEEECCCSCCEEH
T ss_pred             HHHHhcc---CCCCceEEECCCCCeeH
Confidence            9999963   35789999999876554

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.90  E-value=2.9e-23  Score=171.23  Aligned_cols=208  Identities=10%  Similarity=-0.026  Sum_probs=153.9

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      |+|+||||+|+||++++++|+++|++|++++|+++.....       ...+.++.+|++|.+++.+++        .++|
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~Dl~d~~~~~~~~--------~~~d   69 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE-------NEHLKVKKADVSSLDEVCEVC--------KGAD   69 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC-------CTTEEEECCCTTCHHHHHHHH--------TTCS
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc-------cCceEEEEecCCCHHHHHHHh--------cCCC
Confidence            7899999999999999999999999999999998764321       256889999999999988877        4689


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCC----------Chhh
Q 024230          101 IFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANV----------GTVY  170 (270)
Q Consensus       101 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~----------~~~y  170 (270)
                      ++|||||.....          .+.+++|+.++.++++++    .+.+.+++|++||..++.+.+.          ...|
T Consensus        70 ~vi~~a~~~~~~----------~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y  135 (227)
T 3dhn_A           70 AVISAFNPGWNN----------PDIYDETIKVYLTIIDGV----KKAGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENIL  135 (227)
T ss_dssp             EEEECCCC----------------CCSHHHHHHHHHHHHH----HHTTCSEEEEECCSTTSEEETTEEGGGTTCSCGGGH
T ss_pred             EEEEeCcCCCCC----------hhHHHHHHHHHHHHHHHH----HHhCCCEEEEeCChhhccCCCCCccccCCcchHHHH
Confidence            999999864211          126778999999998887    4455679999999887655432          5679


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCC
Q 024230          171 SATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY  250 (270)
Q Consensus       171 ~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  250 (270)
                      +.+|++.+.+.+.++.   ..|++++.+.||.+.++..............+. ......+..++|+|+++++++...  .
T Consensus       136 ~~sK~~~e~~~~~~~~---~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~-~~~~~~~i~~~Dva~ai~~~l~~~--~  209 (227)
T 3dhn_A          136 PGVKALGEFYLNFLMK---EKEIDWVFFSPAADMRPGVRTGRYRLGKDDMIV-DIVGNSHISVEDYAAAMIDELEHP--K  209 (227)
T ss_dssp             HHHHHHHHHHHHTGGG---CCSSEEEEEECCSEEESCCCCCCCEEESSBCCC-CTTSCCEEEHHHHHHHHHHHHHSC--C
T ss_pred             HHHHHHHHHHHHHHhh---ccCccEEEEeCCcccCCCccccceeecCCCccc-CCCCCcEEeHHHHHHHHHHHHhCc--c
Confidence            9999999999888765   458999999999998764322110000000000 000123567999999999999653  3


Q ss_pred             ccCcEEeecCCcc
Q 024230          251 ITGQTVCIDGGFT  263 (270)
Q Consensus       251 ~~G~~i~vdgG~~  263 (270)
                      ..|+++.+.+...
T Consensus       210 ~~g~~~~~~~~~~  222 (227)
T 3dhn_A          210 HHQERFTIGYLEH  222 (227)
T ss_dssp             CCSEEEEEECCSC
T ss_pred             ccCcEEEEEeehh
Confidence            6899999887654

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.89  E-value=4.4e-22  Score=176.57  Aligned_cols=229  Identities=14%  Similarity=0.040  Sum_probs=158.6

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhH-----HHHHHHHHHhcCC-eEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETE-----LNECIHHLQMKGL-KVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~-----~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      |+||||||+|+||.+++++|+++|++|++++|+.+.     ++.+...+...+. ++.++.+|++|.+++.++++.+   
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI---  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc---
Confidence            799999999999999999999999999999998653     2222222211123 6888999999999988888653   


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEecCcccccc----------
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRAS-GAASIVLMSSALGIVS----------  163 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~ii~iss~~~~~~----------  163 (270)
                         ++|++|||||.....    .+.+++++.+++|+.++.++++++.+.+.++ +.++||++||...+..          
T Consensus       106 ---~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E~~~  178 (381)
T 1n7h_A          106 ---KPDEVYNLAAQSHVA----VSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTP  178 (381)
T ss_dssp             ---CCSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSC
T ss_pred             ---CCCEEEECCcccCcc----ccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCCCCC
Confidence               689999999975321    2346678899999999999999999877543 3469999999876542          


Q ss_pred             CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCcc-ccC--ChhhHHHHhhcC----------CCCCC
Q 024230          164 ANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEP-LLG--NGKFVDEVKSRT----------PMGRL  230 (270)
Q Consensus       164 ~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~-~~~--~~~~~~~~~~~~----------~~~~~  230 (270)
                      ......|+.+|++.+.+++.++.++   ++.+..+.|..+..+.... +..  .......+....          ....+
T Consensus       179 ~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~  255 (381)
T 1n7h_A          179 FHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDW  255 (381)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEEC
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeee
Confidence            2345689999999999999998875   4544444444333321110 000  011111111111          11235


Q ss_pred             CChHhHHHHHHHHhCCCCCCccCcEEeecCCccccc
Q 024230          231 GEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       231 ~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                      ..++|+++++++++....    ++++++.+|..++.
T Consensus       256 v~v~Dva~a~~~~~~~~~----~~~~~i~~~~~~s~  287 (381)
T 1n7h_A          256 GFAGDYVEAMWLMLQQEK----PDDYVVATEEGHTV  287 (381)
T ss_dssp             EEHHHHHHHHHHHHTSSS----CCEEEECCSCEEEH
T ss_pred             EEHHHHHHHHHHHHhCCC----CCeEEeeCCCCCcH
Confidence            679999999999996532    57899998876543

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.89  E-value=2e-23  Score=183.73  Aligned_cols=223  Identities=12%  Similarity=0.104  Sum_probs=157.2

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCC-CeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLG-ATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G-~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .++++|+||||||+|+||++++++|+++| ++|++++|+++...  ...+.    .+. +.+|+++.+.++.+++.  ..
T Consensus        42 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~----~~~-~~~d~~~~~~~~~~~~~--~~  112 (357)
T 2x6t_A           42 SGIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV----DLN-IADYMDKEDFLIQIMAG--EE  112 (357)
T ss_dssp             ------CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGTT----TSC-CSEEEEHHHHHHHHHTT--CC
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhccc----Cce-EeeecCcHHHHHHHHhh--cc
Confidence            45788999999999999999999999999 89999999765421  01111    112 66899988887777643  11


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCC--------
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANV--------  166 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~--------  166 (270)
                      + +++|++||+|+....      +.+++++.+++|+.++.++++++.+    .+. +||++||...+...+.        
T Consensus       113 ~-~~~d~Vih~A~~~~~------~~~~~~~~~~~n~~~~~~ll~a~~~----~~~-r~V~~SS~~v~g~~~~~~~~E~~~  180 (357)
T 2x6t_A          113 F-GDVEAIFHEGACSST------TEWDGKYMMDNNYQYSKELLHYCLE----REI-PFLYASSAATYGGRTSDFIESREY  180 (357)
T ss_dssp             C-SSCCEEEECCSCCCT------TCCCHHHHHHHTHHHHHHHHHHHHH----HTC-CEEEEEEGGGGCSCSSCCCSSGGG
T ss_pred             c-CCCCEEEECCcccCC------ccCCHHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEcchHHhCCCCCCCcCCcCC
Confidence            2 479999999997543      2234678899999999999999864    344 8999999877644332        


Q ss_pred             ---ChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC----ChhhHHHHhhcCC----------CCC
Q 024230          167 ---GTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG----NGKFVDEVKSRTP----------MGR  229 (270)
Q Consensus       167 ---~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~~----------~~~  229 (270)
                         ...|+.+|.+.+.+++.++.+   .|++++.+.|+.+.++.......    ...+...+....+          ...
T Consensus       181 ~~p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (357)
T 2x6t_A          181 EKPLNVFGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRD  257 (357)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEEC
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEc
Confidence               458999999999999998765   48999999999998875431100    0112222222211          223


Q ss_pred             CCChHhHHHHHHHHhCCCCCCccCcEEeecCCccccc
Q 024230          230 LGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       230 ~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                      +..++|+++++++++....    |+++++.+|..++.
T Consensus       258 ~i~v~Dva~ai~~~~~~~~----~~~~~i~~~~~~s~  290 (357)
T 2x6t_A          258 FVYVGDVADVNLWFLENGV----SGIFNLGTGRAESF  290 (357)
T ss_dssp             EEEHHHHHHHHHHHHHHCC----CEEEEESCSCCEEH
T ss_pred             cEEHHHHHHHHHHHHhcCC----CCeEEecCCCcccH
Confidence            4678999999999996543    88999999876554

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.89  E-value=3.9e-22  Score=176.09  Aligned_cols=229  Identities=14%  Similarity=0.088  Sum_probs=153.8

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHH-HHHHHHHh----cCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELN-ECIHHLQM----KGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~-~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      +|+|+||||+|+||++++++|+++|++|++++|+.+... +..+.+..    .+.++.++.+|++|.+++.++++.+   
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc---
Confidence            479999999999999999999999999999999865421 11111211    1356888999999999998888653   


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC----------
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA----------  164 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~----------  164 (270)
                         ++|++|||||.....    .+.+++++.+++|+.++.++++++.+.+.+ +.++||++||...+...          
T Consensus        78 ---~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~iv~~SS~~v~g~~~~~~~~E~~~  149 (372)
T 1db3_A           78 ---QPDEVYNLGAMSHVA----VSFESPEYTADVDAMGTLRLLEAIRFLGLE-KKTRFYQASTSELYGLVQEIPQKETTP  149 (372)
T ss_dssp             ---CCSEEEECCCCCTTT----TTTSCHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGGTTCCSSSBCTTSC
T ss_pred             ---CCCEEEECCcccCcc----ccccCHHHHHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCChhhhCCCCCCCCCccCC
Confidence               689999999975432    234456788999999999999999765432 23799999998765432          


Q ss_pred             -CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCcc-ccC--ChhhHHHHhhcC----------CCCCC
Q 024230          165 -NVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEP-LLG--NGKFVDEVKSRT----------PMGRL  230 (270)
Q Consensus       165 -~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~-~~~--~~~~~~~~~~~~----------~~~~~  230 (270)
                       .....|+.||++.+.+++.++.++   ++.+..+.|..+..+.... +..  .......+....          ....+
T Consensus       150 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~  226 (372)
T 1db3_A          150 FYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDW  226 (372)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECC
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHh---CCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeee
Confidence             235689999999999999999875   5666666665554432211 000  011111111111          11235


Q ss_pred             CChHhHHHHHHHHhCCCCCCccCcEEeecCCccccc
Q 024230          231 GEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       231 ~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                      ...+|++++++.++...    .++++++.+|..++.
T Consensus       227 i~v~Dva~a~~~~~~~~----~~~~~ni~~~~~~s~  258 (372)
T 1db3_A          227 GHAKDYVKMQWMMLQQE----QPEDFVIATGVQYSV  258 (372)
T ss_dssp             EEHHHHHHHHHHTTSSS----SCCCEEECCCCCEEH
T ss_pred             eEHHHHHHHHHHHHhcC----CCceEEEcCCCceeH
Confidence            57899999998888543    247788887765543

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.89  E-value=1.4e-22  Score=176.99  Aligned_cols=227  Identities=14%  Similarity=0.111  Sum_probs=159.1

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCC-------CeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLG-------ATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTL   87 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G-------~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   87 (270)
                      ++.+++|+||||||+|+||++++++|+++|       ++|++++|+.+....      ..+.++.++.+|++|.++++++
T Consensus         9 ~~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~------~~~~~~~~~~~Dl~d~~~~~~~   82 (342)
T 2hrz_A            9 NLYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA------GFSGAVDARAADLSAPGEAEKL   82 (342)
T ss_dssp             CSCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT------TCCSEEEEEECCTTSTTHHHHH
T ss_pred             CCCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc------ccCCceeEEEcCCCCHHHHHHH
Confidence            457889999999999999999999999999       899999998653221      1245788899999999988877


Q ss_pred             HHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEecCccccccC-C
Q 024230           88 INTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRAS-GAASIVLMSSALGIVSA-N  165 (270)
Q Consensus        88 ~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~ii~iss~~~~~~~-~  165 (270)
                      ++       +++|++||+||....     .+.+++++.+++|+.++.++++++.+...+. +.++||++||...+.+. +
T Consensus        83 ~~-------~~~d~vih~A~~~~~-----~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~  150 (342)
T 2hrz_A           83 VE-------ARPDVIFHLAAIVSG-----EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLP  150 (342)
T ss_dssp             HH-------TCCSEEEECCCCCHH-----HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCC
T ss_pred             Hh-------cCCCEEEECCccCcc-----cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCC
Confidence            74       479999999997531     2356788999999999999999987654322 24799999999776543 1


Q ss_pred             ----------CChhhhhhHHHHHHHHHHHHHHHc--cCCceEEEEe--cCcccCCCCccccCChhhHHHHhhcC----CC
Q 024230          166 ----------VGTVYSATKGAMNQLAKNLACEWA--KDNIRTNSVA--PWYIRTPFTEPLLGNGKFVDEVKSRT----PM  227 (270)
Q Consensus       166 ----------~~~~y~~sKaal~~~~~sla~el~--~~~i~v~~v~--pG~v~t~~~~~~~~~~~~~~~~~~~~----~~  227 (270)
                                ....|+.||++.+.+++.++.+..  ...+|+..+.  ||...++... +  ............    +.
T Consensus       151 ~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~-~--~~~~~~~~~~~~~~~~~~  227 (342)
T 2hrz_A          151 YPIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASG-F--FSNILREPLVGQEAVLPV  227 (342)
T ss_dssp             SSBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGG-H--HHHHHHHHHTTCCEEECS
T ss_pred             CCcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHH-H--HHHHHHHHhcCCCeeccC
Confidence                      456899999999999999887631  2235666665  6654432110 0  011122221111    11


Q ss_pred             CC-----CCChHhHHHHHHHHhCCCCC-CccCcEEeecCCcc
Q 024230          228 GR-----LGEPKEVSSLVAFLCMPAAS-YITGQTVCIDGGFT  263 (270)
Q Consensus       228 ~~-----~~~~~dva~~~~~l~s~~~~-~~~G~~i~vdgG~~  263 (270)
                      ..     +..++|+++++++++..... ...++++++. |..
T Consensus       228 ~~~~~~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~-g~~  268 (342)
T 2hrz_A          228 PESIRHWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMP-GLS  268 (342)
T ss_dssp             CTTCEEEEECHHHHHHHHHHHHHSCHHHHCSCCEEECC-CEE
T ss_pred             CCccceeeEehHHHHHHHHHHHhccccccCCccEEEcC-CCC
Confidence            11     34789999999998854211 1146788884 443

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.89  E-value=1.3e-22  Score=179.25  Aligned_cols=226  Identities=12%  Similarity=0.116  Sum_probs=165.4

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHC-CCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCC-CHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSML-GATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVS-SRPQRQTLINTVS   92 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~-G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~i~   92 (270)
                      +..+++|+||||||+|+||++++++|+++ |++|++++|+.+......     ...++.++.+|++ +.+++.++++   
T Consensus        19 ~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-----~~~~v~~~~~Dl~~d~~~~~~~~~---   90 (372)
T 3slg_A           19 PGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLV-----KHERMHFFEGDITINKEWVEYHVK---   90 (372)
T ss_dssp             ----CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGG-----GSTTEEEEECCTTTCHHHHHHHHH---
T ss_pred             CcccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhc-----cCCCeEEEeCccCCCHHHHHHHhc---
Confidence            34567899999999999999999999999 999999999876543321     1246889999999 9888888774   


Q ss_pred             HHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC--------
Q 024230           93 SLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA--------  164 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~--------  164 (270)
                           ++|++||+|+.....    ...++..+.+++|+.++.++++++.    +.+ .++|++||...+...        
T Consensus        91 -----~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~----~~~-~~~v~~SS~~vyg~~~~~~~~e~  156 (372)
T 3slg_A           91 -----KCDVILPLVAIATPA----TYVKQPLRVFELDFEANLPIVRSAV----KYG-KHLVFPSTSEVYGMCADEQFDPD  156 (372)
T ss_dssp             -----HCSEEEECBCCCCHH----HHHHCHHHHHHHHTTTTHHHHHHHH----HHT-CEEEEECCGGGGBSCCCSSBCTT
T ss_pred             -----cCCEEEEcCccccHH----HHhhCHHHHHHHHHHHHHHHHHHHH----HhC-CcEEEeCcHHHhCCCCCCCCCcc
Confidence                 589999999975432    1234566789999999999988884    344 799999997655432        


Q ss_pred             ----------CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC----C----hhhHHHHhhcCC
Q 024230          165 ----------NVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG----N----GKFVDEVKSRTP  226 (270)
Q Consensus       165 ----------~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~----~----~~~~~~~~~~~~  226 (270)
                                .....|+.+|.+.+.+++.++.+    |++++.+.|+.+..+.......    .    ..+...+....+
T Consensus       157 ~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (372)
T 3slg_A          157 ASALTYGPINKPRWIYACSKQLMDRVIWGYGME----GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEN  232 (372)
T ss_dssp             TCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCC
T ss_pred             ccccccCCCCCCCCcHHHHHHHHHHHHHHHHHC----CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCC
Confidence                      12237999999999999988765    8999999999998875433111    1    122222222222


Q ss_pred             C---------CCCCChHhHHHHHHHHhCCCCCCccCcEEeecC-Cccccc
Q 024230          227 M---------GRLGEPKEVSSLVAFLCMPAASYITGQTVCIDG-GFTVNG  266 (270)
Q Consensus       227 ~---------~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdg-G~~~~~  266 (270)
                      .         ..+..++|+++++++++........|+++++.+ |..++.
T Consensus       233 ~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~s~  282 (372)
T 3slg_A          233 ISLVDGGSQKRAFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNNFSV  282 (372)
T ss_dssp             EEEGGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTCEEEH
T ss_pred             cEEeCCCceEEEEEEHHHHHHHHHHHHhcccCcCCCceEEeCCCCCCccH
Confidence            1         234578999999999997654446899999999 555543

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.89  E-value=5.5e-23  Score=173.85  Aligned_cols=197  Identities=19%  Similarity=0.159  Sum_probs=149.7

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      .|+|||||++|+||++++++|+++|++|++++|+++...         ...+.++.+|++|.+++.+++        ..+
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~--------~~~   64 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA---------EAHEEIVACDLADAQAVHDLV--------KDC   64 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC---------CTTEEECCCCTTCHHHHHHHH--------TTC
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc---------CCCccEEEccCCCHHHHHHHH--------cCC
Confidence            368999999999999999999999999999999875311         124678899999998888777        468


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCC------------CC
Q 024230          100 NIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSAN------------VG  167 (270)
Q Consensus       100 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~------------~~  167 (270)
                      |++|||||...        .+++++.+++|+.++.++++++.    +.+.++||++||...+...+            ..
T Consensus        65 d~vi~~a~~~~--------~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~  132 (267)
T 3ay3_A           65 DGIIHLGGVSV--------ERPWNDILQANIIGAYNLYEAAR----NLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPD  132 (267)
T ss_dssp             SEEEECCSCCS--------CCCHHHHHHHTHHHHHHHHHHHH----HTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCC
T ss_pred             CEEEECCcCCC--------CCCHHHHHHHHHHHHHHHHHHHH----HhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCC
Confidence            99999999752        23357889999999999999884    34567999999998765433            24


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCccc-CCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCC
Q 024230          168 TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIR-TPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP  246 (270)
Q Consensus       168 ~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (270)
                      ..|+.+|++++.+++.++.   ..|++++.+.||++. ++.      ..   ...      ....+++|+++++.+++..
T Consensus       133 ~~Y~~sK~~~e~~~~~~~~---~~gi~~~~lrp~~v~~~~~------~~---~~~------~~~~~~~dva~~~~~~~~~  194 (267)
T 3ay3_A          133 SLYGLSKCFGEDLASLYYH---KFDIETLNIRIGSCFPKPK------DA---RMM------ATWLSVDDFMRLMKRAFVA  194 (267)
T ss_dssp             SHHHHHHHHHHHHHHHHHH---TTCCCEEEEEECBCSSSCC------SH---HHH------HHBCCHHHHHHHHHHHHHS
T ss_pred             ChHHHHHHHHHHHHHHHHH---HcCCCEEEEeceeecCCCC------CC---Cee------eccccHHHHHHHHHHHHhC
Confidence            6899999999999998864   468999999999874 331      11   111      1246899999999999865


Q ss_pred             CCCCccCcEEeecCCcccc
Q 024230          247 AASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       247 ~~~~~~G~~i~vdgG~~~~  265 (270)
                      ..  ..+.++.+.++....
T Consensus       195 ~~--~~~~~~~~~~~~~~~  211 (267)
T 3ay3_A          195 PK--LGCTVVYGASANTES  211 (267)
T ss_dssp             SC--CCEEEEEECCSCSSC
T ss_pred             CC--CCceeEecCCCcccc
Confidence            32  223455555544333

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.89  E-value=3.6e-22  Score=172.55  Aligned_cols=209  Identities=15%  Similarity=0.073  Sum_probs=126.8

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      +|+||||||+|+||++++++|+++|++|++++|+.+.           . .  ++.+|+++.+++.++++..      ++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----------~-~--~~~~Dl~d~~~~~~~~~~~------~~   61 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-----------P-K--FEQVNLLDSNAVHHIIHDF------QP   61 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC--------------------------------CHHHHHHH------CC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-----------C-C--eEEecCCCHHHHHHHHHhh------CC
Confidence            6899999999999999999999999999999987543           0 1  5779999998888887653      68


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccccc----------CCCChh
Q 024230          100 NIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVS----------ANVGTV  169 (270)
Q Consensus       100 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~----------~~~~~~  169 (270)
                      |++|||||.....    .+.+++++.+++|+.++.++++++.+    .+ .++|++||...+.+          ......
T Consensus        62 d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~v~~SS~~v~~~~~~~~~E~~~~~~~~~  132 (315)
T 2ydy_A           62 HVIVHCAAERRPD----VVENQPDAASQLNVDASGNLAKEAAA----VG-AFLIYISSDYVFDGTNPPYREEDIPAPLNL  132 (315)
T ss_dssp             SEEEECC-----------------------CHHHHHHHHHHHH----HT-CEEEEEEEGGGSCSSSCSBCTTSCCCCCSH
T ss_pred             CEEEECCcccChh----hhhcCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEchHHHcCCCCCCCCCCCCCCCcCH
Confidence            9999999975422    24567788999999999999999964    23 49999999987654          234568


Q ss_pred             hhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCc---cccCChhhHHHHh-hc-------CCCCCCCChHhHHH
Q 024230          170 YSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTE---PLLGNGKFVDEVK-SR-------TPMGRLGEPKEVSS  238 (270)
Q Consensus       170 y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~---~~~~~~~~~~~~~-~~-------~~~~~~~~~~dva~  238 (270)
                      |+.+|++.+.+++.++.       .+..+.|+.+..+...   .+  ......... ..       ........++|+++
T Consensus       133 Y~~sK~~~e~~~~~~~~-------~~~~lR~~~v~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  203 (315)
T 2ydy_A          133 YGKTKLDGEKAVLENNL-------GAAVLRIPILYGEVEKLEESA--VTVMFDKVQFSNKSANMDHWQQRFPTHVKDVAT  203 (315)
T ss_dssp             HHHHHHHHHHHHHHHCT-------TCEEEEECSEECSCSSGGGST--TGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCC-------CeEEEeeeeeeCCCCcccccH--HHHHHHHHHhcCCCeeeccCceECcEEHHHHHH
Confidence            99999999999998743       3344555555443222   11  111222222 11       12345668999999


Q ss_pred             HHHHHhCCC-CCCccCcEEeecCCccccc
Q 024230          239 LVAFLCMPA-ASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       239 ~~~~l~s~~-~~~~~G~~i~vdgG~~~~~  266 (270)
                      ++++++... .....|+++++.+|..++.
T Consensus       204 a~~~~~~~~~~~~~~~~~~~i~~~~~~s~  232 (315)
T 2ydy_A          204 VCRQLAEKRMLDPSIKGTFHWSGNEQMTK  232 (315)
T ss_dssp             HHHHHHHHHHTCTTCCEEEECCCSCCBCH
T ss_pred             HHHHHHHhhccccCCCCeEEEcCCCcccH
Confidence            999998642 1235789999999877654

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.89  E-value=3.3e-22  Score=174.59  Aligned_cols=220  Identities=12%  Similarity=0.085  Sum_probs=159.9

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHC-CCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCH-HHHHHHHHHHHHHcCCc
Q 024230           21 MTALVTGGTKGLGLAVVEELSML-GATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR-PQRQTLINTVSSLFNGK   98 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~-G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~i~~~~~~~   98 (270)
                      |+||||||+|+||++++++|+++ |++|++++|+.+..+...     ...++.++.+|+++. +.++++++        +
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~--------~   67 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHVK--------K   67 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-----TCTTEEEEECCTTTCSHHHHHHHH--------H
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh-----cCCCeEEEeccccCcHHHHHhhcc--------C
Confidence            57999999999999999999998 899999999877543211     124688899999984 45665552        5


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCC------------
Q 024230           99 LNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANV------------  166 (270)
Q Consensus        99 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~------------  166 (270)
                      +|++||+||......    ..+++++.+++|+.++.++++++.    +.+ +++|++||...+...+.            
T Consensus        68 ~d~vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~  138 (345)
T 2bll_A           68 CDVVLPLVAIATPIE----YTRNPLRVFELDFEENLRIIRYCV----KYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIV  138 (345)
T ss_dssp             CSEEEECBCCCCHHH----HHHSHHHHHHHHTHHHHHHHHHHH----HTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBC
T ss_pred             CCEEEEcccccCccc----hhcCHHHHHHHHHHHHHHHHHHHH----HhC-CeEEEEecHHHcCCCCCCCcCCccccccc
Confidence            799999999753211    134567789999999999988884    344 79999999876533211            


Q ss_pred             ------ChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC-----C---hhhHHHHhhcCC------
Q 024230          167 ------GTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG-----N---GKFVDEVKSRTP------  226 (270)
Q Consensus       167 ------~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~-----~---~~~~~~~~~~~~------  226 (270)
                            ...|+.+|.+.+.+++.++.+.   |++++.+.||.+..+.......     .   ..+........+      
T Consensus       139 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (345)
T 2bll_A          139 GPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDG  215 (345)
T ss_dssp             CCTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGG
T ss_pred             CcccCcccccHHHHHHHHHHHHHHHHhc---CCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECC
Confidence                  1279999999999999998764   7999999999998876432110     0   122222222221      


Q ss_pred             ---CCCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCc-ccc
Q 024230          227 ---MGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGF-TVN  265 (270)
Q Consensus       227 ---~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~-~~~  265 (270)
                         ...+..++|+++++++++.......+|+++++.+|. .++
T Consensus       216 g~~~~~~i~v~Dva~a~~~~~~~~~~~~~g~~~~i~~~~~~~s  258 (345)
T 2bll_A          216 GKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEAS  258 (345)
T ss_dssp             SCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTSEEE
T ss_pred             CCEEEEEEEHHHHHHHHHHHHhhccccCCCceEEeCCCCCCCC
Confidence               123567999999999999754444689999999984 443

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.88  E-value=4.5e-22  Score=172.23  Aligned_cols=215  Identities=15%  Similarity=0.134  Sum_probs=145.2

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeC-ChhHHHHH--HHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSR-TETELNEC--IHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r-~~~~~~~~--~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      ||+||||||+|+||++++++|+++|++|+++.| +++..++.  ...+...+.++.++.+|++|.+++++++        
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--------   72 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAI--------   72 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHH--------
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHH--------
Confidence            689999999999999999999999999999988 55321111  1111101125778899999999888777        


Q ss_pred             CcccEEEECCCCCCCCCCCCCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCC---------
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYNAED-FSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANV---------  166 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~---------  166 (270)
                      ..+|++||+|+..      ..+.++ +++.+++|+.+++++++++.+.   .+.++||++||..++.+.+.         
T Consensus        73 ~~~d~vih~A~~~------~~~~~~~~~~~~~~nv~gt~~l~~aa~~~---~~~~~iV~~SS~~~~~~~~~~~~~~~e~~  143 (322)
T 2p4h_X           73 EGCVGIFHTASPI------DFAVSEPEEIVTKRTVDGALGILKACVNS---KTVKRFIYTSSGSAVSFNGKDKDVLDESD  143 (322)
T ss_dssp             TTCSEEEECCCCC--------------CHHHHHHHHHHHHHHHHHTTC---SSCCEEEEEEEGGGTSCSSSCCSEECTTC
T ss_pred             cCCCEEEEcCCcc------cCCCCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeccHHHcccCCCCCeecCCcc
Confidence            4689999999642      112222 3568999999999999998542   14579999999876533211         


Q ss_pred             -------------ChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHH---hhc----CC
Q 024230          167 -------------GTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEV---KSR----TP  226 (270)
Q Consensus       167 -------------~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~---~~~----~~  226 (270)
                                   ...|+.||.+.+.+++.++.+   .|++++.+.||.+.+++.....  ......+   ...    .+
T Consensus       144 ~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~g~~~~~~~--~~~~~~~~~~~~g~~~~~~  218 (322)
T 2p4h_X          144 WSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ---NGIDVVTLILPFIVGRFVCPKL--PDSIEKALVLVLGKKEQIG  218 (322)
T ss_dssp             CCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---TTCCEEEEEECEEESCCCSSSC--CHHHHHHTHHHHSCGGGCC
T ss_pred             ccchhhhcccCcccccHHHHHHHHHHHHHHHHHh---cCCcEEEEcCCceECCCCCCCC--CchHHHHHHHHhCCCccCc
Confidence                         116999999888877665543   5899999999999998754321  1111111   111    11


Q ss_pred             CC--CCCChHhHHHHHHHHhCCCCCCccCcEEeec
Q 024230          227 MG--RLGEPKEVSSLVAFLCMPAASYITGQTVCID  259 (270)
Q Consensus       227 ~~--~~~~~~dva~~~~~l~s~~~~~~~G~~i~vd  259 (270)
                      ..  .+..++|+++++++++...  ..+|+ +++.
T Consensus       219 ~~~~~~i~v~Dva~a~~~~~~~~--~~~g~-~~~~  250 (322)
T 2p4h_X          219 VTRFHMVHVDDVARAHIYLLENS--VPGGR-YNCS  250 (322)
T ss_dssp             EEEEEEEEHHHHHHHHHHHHHSC--CCCEE-EECC
T ss_pred             CCCcCEEEHHHHHHHHHHHhhCc--CCCCC-EEEc
Confidence            11  3678999999999999642  25676 4444

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.88  E-value=9.4e-22  Score=169.79  Aligned_cols=211  Identities=15%  Similarity=0.089  Sum_probs=157.4

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      +|+|+||||+|.||++++++|+++|++|++++|++...+     +.    .+.++.+|++ .+++.+++        .++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~----~~~~~~~Dl~-~~~~~~~~--------~~~   63 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-----IN----DYEYRVSDYT-LEDLINQL--------NDV   63 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC--------------CCEEEECCCC-HHHHHHHT--------TTC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-----CC----ceEEEEcccc-HHHHHHhh--------cCC
Confidence            479999999999999999999999999999999844322     11    5778999999 88877766        479


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCC-----------CCh
Q 024230          100 NIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSAN-----------VGT  168 (270)
Q Consensus       100 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~-----------~~~  168 (270)
                      |++||+|+.....        +.++.+++|+.++.++++++    .+.+..++|++||...+....           ...
T Consensus        64 d~Vih~a~~~~~~--------~~~~~~~~n~~~~~~ll~a~----~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~  131 (311)
T 3m2p_A           64 DAVVHLAATRGSQ--------GKISEFHDNEILTQNLYDAC----YENNISNIVYASTISAYSDETSLPWNEKELPLPDL  131 (311)
T ss_dssp             SEEEECCCCCCSS--------SCGGGTHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSS
T ss_pred             CEEEEccccCCCC--------ChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCc
Confidence            9999999986543        33456889999999998888    445567899999976654321           235


Q ss_pred             hhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCC---------CCCCChHhHHHH
Q 024230          169 VYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPM---------GRLGEPKEVSSL  239 (270)
Q Consensus       169 ~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~  239 (270)
                      .|+.+|.+.+.+++.++.+   .|++++.+.|+.+..+..........+........+.         ..+...+|++++
T Consensus       132 ~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a  208 (311)
T 3m2p_A          132 MYGVSKLACEHIGNIYSRK---KGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKS  208 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---SCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHH
Confidence            7999999999999998875   5899999999999887554221112233333222221         124458999999


Q ss_pred             HHHHhCCCCCCccCcEEeecCCccccc
Q 024230          240 VAFLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       240 ~~~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                      +++++....   .|+++++.+|..++.
T Consensus       209 ~~~~~~~~~---~~~~~~i~~~~~~s~  232 (311)
T 3m2p_A          209 VIYALKQEK---VSGTFNIGSGDALTN  232 (311)
T ss_dssp             HHHHTTCTT---CCEEEEECCSCEECH
T ss_pred             HHHHHhcCC---CCCeEEeCCCCcccH
Confidence            999996543   799999999876654

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.88  E-value=7.2e-22  Score=171.64  Aligned_cols=223  Identities=12%  Similarity=0.087  Sum_probs=161.1

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      |+|+||||+|+||++++++|+++|++|++++|+.....+      ....++.++.+|++|.+++++++++      .++|
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~D~~~~~~~~~~~~~------~~~d   69 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHED------AITEGAKFYNGDLRDKAFLRDVFTQ------ENIE   69 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG------GSCTTSEEEECCTTCHHHHHHHHHH------SCEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchh------hcCCCcEEEECCCCCHHHHHHHHhh------cCCC
Confidence            689999999999999999999999999999987543221      1112577889999999998888764      4799


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC-----------CCChh
Q 024230          101 IFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA-----------NVGTV  169 (270)
Q Consensus       101 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~-----------~~~~~  169 (270)
                      ++||+|+.....    .+.+++++.+++|+.++.++++++    .+.+.+++|++||...+...           .....
T Consensus        70 ~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~  141 (330)
T 2c20_A           70 AVMHFAADSLVG----VSMEKPLQYYNNNVYGALCLLEVM----DEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNT  141 (330)
T ss_dssp             EEEECCCCCCHH----HHHHSHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSH
T ss_pred             EEEECCcccCcc----ccccCHHHHHHHHhHHHHHHHHHH----HHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCCh
Confidence            999999975321    134567889999999999999887    44456799999998765432           23468


Q ss_pred             hhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC-----ChhhHHHHh----hc-CC-------------
Q 024230          170 YSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG-----NGKFVDEVK----SR-TP-------------  226 (270)
Q Consensus       170 y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~-----~~~~~~~~~----~~-~~-------------  226 (270)
                      |+.+|.+.+.+++.++.++   |++++.+.|+.+..+.......     ...+...+.    .. .+             
T Consensus       142 Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g  218 (330)
T 2c20_A          142 YGETKLAIEKMLHWYSQAS---NLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDG  218 (330)
T ss_dssp             HHHHHHHHHHHHHHHHHTS---SCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSS
T ss_pred             HHHHHHHHHHHHHHHHHHh---CCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCC
Confidence            9999999999999988764   8999999999998875322211     111221111    11 10             


Q ss_pred             --CCCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCccccc
Q 024230          227 --MGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       227 --~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                        ...+...+|++++++.++........++++++.+|..++.
T Consensus       219 ~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~  260 (330)
T 2c20_A          219 TCIRDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGFSV  260 (330)
T ss_dssp             SCEECEEEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTCBCH
T ss_pred             ceeEeeEeHHHHHHHHHHHHhccccCCCCCeEEeCCCCCccH
Confidence              0123458999999998885321112478999988766543

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.88  E-value=1.1e-21  Score=161.38  Aligned_cols=199  Identities=13%  Similarity=0.039  Sum_probs=141.3

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcccE
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNI  101 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~  101 (270)
                      +|+||||+|+||++++++|+++|++|++++|+++....+      ....+.++.+|++|.++  +.       + +.+|+
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~~~~~~~D~~d~~~--~~-------~-~~~d~   65 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR------LGATVATLVKEPLVLTE--AD-------L-DSVDA   65 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH------TCTTSEEEECCGGGCCH--HH-------H-TTCSE
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccc------cCCCceEEecccccccH--hh-------c-ccCCE
Confidence            699999999999999999999999999999998876532      12467889999999877  22       2 67999


Q ss_pred             EEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCC--------------C
Q 024230          102 FVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANV--------------G  167 (270)
Q Consensus       102 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~--------------~  167 (270)
                      +|||||......           ...+|+.++.+++++    +++.+ +++|++||.+++.+.+.              .
T Consensus        66 vi~~ag~~~~~~-----------~~~~n~~~~~~l~~a----~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~  129 (224)
T 3h2s_A           66 VVDALSVPWGSG-----------RGYLHLDFATHLVSL----LRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQ  129 (224)
T ss_dssp             EEECCCCCTTSS-----------CTHHHHHHHHHHHHT----CTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGS
T ss_pred             EEECCccCCCcc-----------hhhHHHHHHHHHHHH----HHHcC-CcEEEEecceeeccCCCCccccccCCCCCccc
Confidence            999999862111           124677776665544    46666 89999999877654433              5


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCC
Q 024230          168 TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA  247 (270)
Q Consensus       168 ~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (270)
                      ..|+.+|++.+.+ +   ......+++++.+.||++.++....-  .......+..........+++|+|+++++++...
T Consensus       130 ~~y~~sK~~~e~~-~---~~~~~~~i~~~ivrp~~v~g~~~~~~--~~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~  203 (224)
T 3h2s_A          130 PWYDGALYQYYEY-Q---FLQMNANVNWIGISPSEAFPSGPATS--YVAGKDTLLVGEDGQSHITTGNMALAILDQLEHP  203 (224)
T ss_dssp             TTHHHHHHHHHHH-H---HHTTCTTSCEEEEEECSBCCCCCCCC--EEEESSBCCCCTTSCCBCCHHHHHHHHHHHHHSC
T ss_pred             hhhHHHHHHHHHH-H---HHHhcCCCcEEEEcCccccCCCcccC--ceecccccccCCCCCceEeHHHHHHHHHHHhcCc
Confidence            6799999998854 2   22246789999999999998722111  0000000000112235678999999999999653


Q ss_pred             CCCccCcEEeecC
Q 024230          248 ASYITGQTVCIDG  260 (270)
Q Consensus       248 ~~~~~G~~i~vdg  260 (270)
                        ...|+++.+.+
T Consensus       204 --~~~g~~~~~~~  214 (224)
T 3h2s_A          204 --TAIRDRIVVRD  214 (224)
T ss_dssp             --CCTTSEEEEEE
T ss_pred             --cccCCEEEEec
Confidence              35688888754

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.88  E-value=1.7e-21  Score=170.00  Aligned_cols=228  Identities=12%  Similarity=0.090  Sum_probs=153.4

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQM-KGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      +||||||+|+||++++++|+++|++|++++|......+..+.+.. .+.++.++.+|++++++++++++.      .++|
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~------~~~D   75 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHD------HAID   75 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHH------TTCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhc------cCCC
Confidence            799999999999999999999999999998643211111122222 134677889999999998888764      2699


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccccc-----------C-CCCh
Q 024230          101 IFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVS-----------A-NVGT  168 (270)
Q Consensus       101 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~-----------~-~~~~  168 (270)
                      ++|||||......    ..++..+.+++|+.+++++++++    ++.+.++||++||...+..           . +...
T Consensus        76 ~vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~  147 (338)
T 1udb_A           76 TVIHFAGLKAVGE----SVQKPLEYYDNNVNGTLRLISAM----RAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQS  147 (338)
T ss_dssp             EEEECCSCCCHHH----HHHCHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSS
T ss_pred             EEEECCccCcccc----chhcHHHHHHHHHHHHHHHHHHH----HhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCC
Confidence            9999999753211    23445678999999999998865    4445679999999876532           1 2256


Q ss_pred             hhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC------ChhhHHHH---hh--cC------------
Q 024230          169 VYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG------NGKFVDEV---KS--RT------------  225 (270)
Q Consensus       169 ~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~------~~~~~~~~---~~--~~------------  225 (270)
                      .|+.||++++.+++.++.+.  .++++..+.|+.+..+.......      .......+   ..  ..            
T Consensus       148 ~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  225 (338)
T 1udb_A          148 PYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTE  225 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSS
T ss_pred             hHHHHHHHHHHHHHHHHHhc--CCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCC
Confidence            89999999999999998874  37899888887665442111100      01111111   11  10            


Q ss_pred             ---CCCCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCcccc
Q 024230          226 ---PMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       226 ---~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                         ....+..++|++++++.++........++++++.+|..++
T Consensus       226 ~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~~s  268 (338)
T 1udb_A          226 DGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNS  268 (338)
T ss_dssp             SSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSCCEE
T ss_pred             CCceeeeeEEHHHHHHHHHHHHhhhhccCCCcEEEecCCCcee
Confidence               0112446899999998877421111234788998776543

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.88  E-value=1.3e-21  Score=170.46  Aligned_cols=226  Identities=13%  Similarity=0.009  Sum_probs=158.5

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHH-HHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELN-ECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      .+++||||||+|+||++++++|+++|++|++++|+.+... .....+. ...++.++.+|++|.+++.++++.+      
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~------   85 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG-IEGDIQYEDGDMADACSVQRAVIKA------   85 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHH------
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhcc-ccCceEEEECCCCCHHHHHHHHHHc------
Confidence            5689999999999999999999999999999999865421 1111111 1346888999999999988888653      


Q ss_pred             cccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCccccccCCC----------
Q 024230           98 KLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIVSANV----------  166 (270)
Q Consensus        98 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~~~~~~~~----------  166 (270)
                      ++|++||+||.....    .+.+++++.+++|+.++.++++++.+    .+ .++||++||...+...+.          
T Consensus        86 ~~d~Vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~  157 (335)
T 1rpn_A           86 QPQEVYNLAAQSFVG----ASWNQPVTTGVVDGLGVTHLLEAIRQ----FSPETRFYQASTSEMFGLIQAERQDENTPFY  157 (335)
T ss_dssp             CCSEEEECCSCCCHH----HHTTSHHHHHHHHTHHHHHHHHHHHH----HCTTSEEEEEEEGGGGCSCSSSSBCTTSCCC
T ss_pred             CCCEEEECccccchh----hhhhChHHHHHHHHHHHHHHHHHHHH----hCCCCeEEEEeCHHHhCCCCCCCCCcccCCC
Confidence            689999999964321    11234678899999999999998854    33 379999999876543221          


Q ss_pred             -ChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC---ChhhHHHHhhcC-C---------CCCCCC
Q 024230          167 -GTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG---NGKFVDEVKSRT-P---------MGRLGE  232 (270)
Q Consensus       167 -~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~---~~~~~~~~~~~~-~---------~~~~~~  232 (270)
                       ...|+.+|++.+.+++.++.++   ++++..+.|+.+..+.......   ............ +         ...+..
T Consensus       158 p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~  234 (335)
T 1rpn_A          158 PRSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGF  234 (335)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEE
T ss_pred             CCChhHHHHHHHHHHHHHHHHHc---CCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEE
Confidence             3579999999999999998775   6888888888877664321100   011111111111 1         112446


Q ss_pred             hHhHHHHHHHHhCCCCCCccCcEEeecCCccccc
Q 024230          233 PKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       233 ~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                      .+|++++++.++....    ++++++.+|..++.
T Consensus       235 v~Dva~a~~~~~~~~~----~~~~ni~~~~~~s~  264 (335)
T 1rpn_A          235 AGDYVEAMWLMLQQDK----ADDYVVATGVTTTV  264 (335)
T ss_dssp             HHHHHHHHHHHHHSSS----CCCEEECCSCEEEH
T ss_pred             HHHHHHHHHHHHhcCC----CCEEEEeCCCCccH
Confidence            7999999999986532    47888888876543

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.87  E-value=2.2e-21  Score=171.76  Aligned_cols=228  Identities=15%  Similarity=0.048  Sum_probs=158.2

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhH-----HHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETE-----LNECIHHLQM-KGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~-----~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      |+||||||+|+||++++++|+++|++|++++|+++.     ++.+.+.+.. .+.++.++.+|++|.+++.++++.+   
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV---  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc---
Confidence            789999999999999999999999999999997643     2211111110 1346888999999999988888653   


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC----------
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA----------  164 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~----------  164 (270)
                         ++|++|||||.....    .+.+++++.+++|+.++.++++++.+.+.+ +.++||++||...+...          
T Consensus       102 ---~~d~vih~A~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~-~~~~iv~~SS~~~~~~~~~~~~~E~~~  173 (375)
T 1t2a_A          102 ---KPTEIYNLGAQSHVK----ISFDLAEYTADVDGVGTLRLLDAVKTCGLI-NSVKFYQASTSELYGKVQEIPQKETTP  173 (375)
T ss_dssp             ---CCSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGTCSCSSSSBCTTSC
T ss_pred             ---CCCEEEECCCccccc----ccccCHHHHHHHHHHHHHHHHHHHHHhCCC-ccceEEEecchhhhCCCCCCCCCccCC
Confidence               689999999974321    134667889999999999999999765431 12799999998776432          


Q ss_pred             -CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCcc-ccC--ChhhHHHHhhc-CC---------CCCC
Q 024230          165 -NVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEP-LLG--NGKFVDEVKSR-TP---------MGRL  230 (270)
Q Consensus       165 -~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~-~~~--~~~~~~~~~~~-~~---------~~~~  230 (270)
                       .....|+.+|++++.+++.++.++   ++.+..+.|+.+..+.... +..  .......+... .+         ...+
T Consensus       174 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~  250 (375)
T 1t2a_A          174 FYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDW  250 (375)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECC
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeee
Confidence             234689999999999999998875   6777778777666543211 100  01111111111 11         1234


Q ss_pred             CChHhHHHHHHHHhCCCCCCccCcEEeecCCccccc
Q 024230          231 GEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       231 ~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                      ..++|++++++.++....    ++.+++.+|..++.
T Consensus       251 i~v~Dva~a~~~~~~~~~----~~~~ni~~~~~~s~  282 (375)
T 1t2a_A          251 GHAKDYVEAMWLMLQNDE----PEDFVIATGEVHSV  282 (375)
T ss_dssp             EEHHHHHHHHHHHHHSSS----CCCEEECCSCCEEH
T ss_pred             EEHHHHHHHHHHHHhcCC----CceEEEeCCCcccH
Confidence            569999999999886432    46788877765543

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.87  E-value=3.8e-21  Score=157.50  Aligned_cols=204  Identities=14%  Similarity=0.100  Sum_probs=134.7

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      ++|+||||+|+||++++++|+++|++|++++|+++..+...       ..+.++.+|++|+++  +.       + ..+|
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-------~~~~~~~~D~~d~~~--~~-------~-~~~d   63 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-------KDINILQKDIFDLTL--SD-------L-SDQN   63 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-------SSSEEEECCGGGCCH--HH-------H-TTCS
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-------CCCeEEeccccChhh--hh-------h-cCCC
Confidence            36999999999999999999999999999999987765432       357889999999877  22       2 6799


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCC------------Ch
Q 024230          101 IFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANV------------GT  168 (270)
Q Consensus       101 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~------------~~  168 (270)
                      ++|||||....             ...+|+.++..+    ++.+++.+.+++|++||..++.+.+.            ..
T Consensus        64 ~vi~~ag~~~~-------------~~~~~~~~~~~l----~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~  126 (221)
T 3ew7_A           64 VVVDAYGISPD-------------EAEKHVTSLDHL----ISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAP  126 (221)
T ss_dssp             EEEECCCSSTT-------------TTTSHHHHHHHH----HHHHCSCCSSEEEEECCCC-------------------CC
T ss_pred             EEEECCcCCcc-------------ccchHHHHHHHH----HHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHH
Confidence            99999998432             123466665555    44557766789999999987655432            34


Q ss_pred             hhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCC
Q 024230          169 VYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAA  248 (270)
Q Consensus       169 ~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  248 (270)
                      .|+.+|.+.+.+. .+..  ...|++++.+.||++.++....- ........+..........+++|+|++++.++... 
T Consensus       127 ~y~~~k~~~e~~~-~~~~--~~~gi~~~ivrp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~-  201 (221)
T 3ew7_A          127 YYPTARAQAKQLE-HLKS--HQAEFSWTYISPSAMFEPGERTG-DYQIGKDHLLFGSDGNSFISMEDYAIAVLDEIERP-  201 (221)
T ss_dssp             CSCCHHHHHHHHH-HHHT--TTTTSCEEEEECSSCCCCC----------------------CCCHHHHHHHHHHHHHSC-
T ss_pred             HHHHHHHHHHHHH-HHHh--hccCccEEEEeCcceecCCCccC-ceEeccccceecCCCCceEeHHHHHHHHHHHHhCc-
Confidence            5999999998873 2221  15789999999999988621100 00000000110111124678999999999999653 


Q ss_pred             CCccCcEEeecCCccc
Q 024230          249 SYITGQTVCIDGGFTV  264 (270)
Q Consensus       249 ~~~~G~~i~vdgG~~~  264 (270)
                       ...|+.+++-|-..-
T Consensus       202 -~~~g~~~~~~~~~~~  216 (221)
T 3ew7_A          202 -NHLNEHFTVAGKLEH  216 (221)
T ss_dssp             -SCTTSEEECCC----
T ss_pred             -cccCCEEEECCCCcc
Confidence             357999998876543

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.87  E-value=8.1e-22  Score=168.56  Aligned_cols=198  Identities=17%  Similarity=0.152  Sum_probs=148.9

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      +.|+||||||+|+||++++++|+++|++|++++|+                     .+|++|.+++.++++..      +
T Consensus        11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------------~~Dl~d~~~~~~~~~~~------~   63 (292)
T 1vl0_A           11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ---------------------DLDITNVLAVNKFFNEK------K   63 (292)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT---------------------TCCTTCHHHHHHHHHHH------C
T ss_pred             ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc---------------------cCCCCCHHHHHHHHHhc------C
Confidence            45899999999999999999999999999999986                     27999999988887643      6


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCC-----------CC
Q 024230           99 LNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSAN-----------VG  167 (270)
Q Consensus        99 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~-----------~~  167 (270)
                      +|++|||||....    +.+.+++++.+++|+.++.++++++.+    .+. +||++||...+.+.+           ..
T Consensus        64 ~d~vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~----~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~  134 (292)
T 1vl0_A           64 PNVVINCAAHTAV----DKCEEQYDLAYKINAIGPKNLAAAAYS----VGA-EIVQISTDYVFDGEAKEPITEFDEVNPQ  134 (292)
T ss_dssp             CSEEEECCCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHH----HTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCC
T ss_pred             CCEEEECCccCCH----HHHhcCHHHHHHHHHHHHHHHHHHHHH----cCC-eEEEechHHeECCCCCCCCCCCCCCCCc
Confidence            8999999997432    123466788999999999999999854    333 999999987654432           24


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcC-------CCCCCCChHhHHHHH
Q 024230          168 TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRT-------PMGRLGEPKEVSSLV  240 (270)
Q Consensus       168 ~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~dva~~~  240 (270)
                      ..|+.+|++.+.+++.++.       .+..+.|+.+..+ ...+.  ...........       ....+..++|+++++
T Consensus       135 ~~Y~~sK~~~E~~~~~~~~-------~~~~lR~~~v~G~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  204 (292)
T 1vl0_A          135 SAYGKTKLEGENFVKALNP-------KYYIVRTAWLYGD-GNNFV--KTMINLGKTHDELKVVHDQVGTPTSTVDLARVV  204 (292)
T ss_dssp             SHHHHHHHHHHHHHHHHCS-------SEEEEEECSEESS-SSCHH--HHHHHHHHHCSEEEEESSCEECCEEHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHhhCC-------CeEEEeeeeeeCC-CcChH--HHHHHHHhcCCcEEeecCeeeCCccHHHHHHHH
Confidence            6799999999999988643       4677888887765 22111  11222222111       123456799999999


Q ss_pred             HHHhCCCCCCccCcEEeecCCccccc
Q 024230          241 AFLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       241 ~~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                      ++++...    +|+++++.+|..++.
T Consensus       205 ~~~~~~~----~~~~~~i~~~~~~s~  226 (292)
T 1vl0_A          205 LKVIDEK----NYGTFHCTCKGICSW  226 (292)
T ss_dssp             HHHHHHT----CCEEEECCCBSCEEH
T ss_pred             HHHHhcC----CCcEEEecCCCCccH
Confidence            9999653    789999999876554

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.87  E-value=1.7e-21  Score=184.68  Aligned_cols=224  Identities=12%  Similarity=0.087  Sum_probs=163.0

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHC-CCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHH-HHHHHHHHHHH
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSML-GATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQ-RQTLINTVSSL   94 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~-G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~i~~~   94 (270)
                      .+++|+|+||||+|+||++++++|+++ |++|++++|+++..+...     ...++.++.+|+++.++ +++++      
T Consensus       312 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~-----~~~~v~~v~~Dl~d~~~~~~~~~------  380 (660)
T 1z7e_A          312 ARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHV------  380 (660)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGT-----TCTTEEEEECCTTTCHHHHHHHH------
T ss_pred             hccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhc-----cCCceEEEECCCCCcHHHHHHhh------
Confidence            457899999999999999999999998 899999999876543211     13468889999998764 44444      


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCC---------
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSAN---------  165 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~---------  165 (270)
                        .++|++||+||.....    ...+++++.+++|+.++.++++++.+    .+ +++|++||...+...+         
T Consensus       381 --~~~D~Vih~Aa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~aa~~----~~-~r~V~~SS~~vyg~~~~~~~~E~~~  449 (660)
T 1z7e_A          381 --KKCDVVLPLVAIATPI----EYTRNPLRVFELDFEENLRIIRYCVK----YR-KRIIFPSTSEVYGMCSDKYFDEDHS  449 (660)
T ss_dssp             --HHCSEEEECCCCCCTH----HHHHSHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEECCGGGGBTCCSSSBCTTTC
T ss_pred             --cCCCEEEECceecCcc----ccccCHHHHHHhhhHHHHHHHHHHHH----hC-CEEEEEecHHHcCCCCCcccCCCcc
Confidence              2589999999975421    12345678899999999999888843    44 7999999987653321         


Q ss_pred             ---------CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCcccc----C----ChhhHHHHhhcCCC-
Q 024230          166 ---------VGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLL----G----NGKFVDEVKSRTPM-  227 (270)
Q Consensus       166 ---------~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~----~----~~~~~~~~~~~~~~-  227 (270)
                               ....|+.||.+.+.+++.++.+.   |++++.+.||.+.++......    .    ...+........+. 
T Consensus       450 ~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  526 (660)
T 1z7e_A          450 NLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIK  526 (660)
T ss_dssp             CEEECCTTCTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEE
T ss_pred             ccccCcccCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcE
Confidence                     12369999999999999998764   799999999999987653210    0    01222222222221 


Q ss_pred             --------CCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCc-ccc
Q 024230          228 --------GRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGF-TVN  265 (270)
Q Consensus       228 --------~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~-~~~  265 (270)
                              ..+..++|+++++++++.......+|+++++++|. .++
T Consensus       527 ~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~~~~s  573 (660)
T 1z7e_A          527 LIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEAS  573 (660)
T ss_dssp             EEGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCGGGEEE
T ss_pred             EeCCCCeEEEEEEHHHHHHHHHHHHhCccccCCCeEEEECCCCCCcC
Confidence                    23556999999999999765445689999999985 443

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.86  E-value=1.2e-22  Score=165.91  Aligned_cols=199  Identities=12%  Similarity=0.093  Sum_probs=148.3

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC--eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      ++|+|+||||+|+||++++++|+++|+  +|++++|+++.          ...++.++.+|+++.+++.+++        
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----------~~~~~~~~~~D~~~~~~~~~~~--------   65 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------EHPRLDNPVGPLAELLPQLDGS--------   65 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------CCTTEECCBSCHHHHGGGCCSC--------
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----------cCCCceEEeccccCHHHHHHhh--------
Confidence            578999999999999999999999998  99999998765          1235777889988776554433        


Q ss_pred             CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHH
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGA  176 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaa  176 (270)
                        +|++|||+|....      +.+++++.+++|+.++..+++++.    +.+.+++|++||..++..  ....|+.+|++
T Consensus        66 --~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~--~~~~y~~sK~~  131 (215)
T 2a35_A           66 --IDTAFCCLGTTIK------EAGSEEAFRAVDFDLPLAVGKRAL----EMGARHYLVVSALGADAK--SSIFYNRVKGE  131 (215)
T ss_dssp             --CSEEEECCCCCHH------HHSSHHHHHHHHTHHHHHHHHHHH----HTTCCEEEEECCTTCCTT--CSSHHHHHHHH
T ss_pred             --hcEEEECeeeccc------cCCCHHHHHHhhHHHHHHHHHHHH----HcCCCEEEEECCcccCCC--CccHHHHHHHH
Confidence              7999999996432      234577889999999999998874    445678999999887653  34579999999


Q ss_pred             HHHHHHHHHHHHccCCce-EEEEecCcccCCCCccccCChhhHHHHh-hcCCC----CCCCChHhHHHHHHHHhCCCCCC
Q 024230          177 MNQLAKNLACEWAKDNIR-TNSVAPWYIRTPFTEPLLGNGKFVDEVK-SRTPM----GRLGEPKEVSSLVAFLCMPAASY  250 (270)
Q Consensus       177 l~~~~~sla~el~~~~i~-v~~v~pG~v~t~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~dva~~~~~l~s~~~~~  250 (270)
                      ++.+++.       .|++ ++.+.||++.++.....     +.+.+. ...+.    .....++|+++++++++....  
T Consensus       132 ~e~~~~~-------~~~~~~~~vrp~~v~g~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--  197 (215)
T 2a35_A          132 LEQALQE-------QGWPQLTIARPSLLFGPREEFR-----LAEILAAPIARILPGKYHGIEACDLARALWRLALEEG--  197 (215)
T ss_dssp             HHHHHTT-------SCCSEEEEEECCSEESTTSCEE-----GGGGTTCCCC----CHHHHHHHHHHHHHHHHHHTCCC--
T ss_pred             HHHHHHH-------cCCCeEEEEeCceeeCCCCcch-----HHHHHHHhhhhccCCCcCcEeHHHHHHHHHHHHhcCC--
Confidence            9999875       3898 99999999998754311     111110 00111    123468999999999997542  


Q ss_pred             ccCcEEeecCCcccc
Q 024230          251 ITGQTVCIDGGFTVN  265 (270)
Q Consensus       251 ~~G~~i~vdgG~~~~  265 (270)
                        ++.+++.++..+.
T Consensus       198 --~~~~~i~~~~~~~  210 (215)
T 2a35_A          198 --KGVRFVESDELRK  210 (215)
T ss_dssp             --SEEEEEEHHHHHH
T ss_pred             --CCceEEcHHHHHH
Confidence              7788887765543

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.86  E-value=7.5e-22  Score=172.16  Aligned_cols=212  Identities=17%  Similarity=0.129  Sum_probs=144.5

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHH--HHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNEC--IHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~--~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      +|+||||||+|+||++++++|+++|++|+++.|+.+...+.  ...+. ...++.++.+|++|.+++.+++        .
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~--------~   79 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-ELGDLKIFRADLTDELSFEAPI--------A   79 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-GGSCEEEEECCTTTSSSSHHHH--------T
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-CCCcEEEEecCCCChHHHHHHH--------c
Confidence            78999999999999999999999999999988876532111  11232 2246788899999988877776        4


Q ss_pred             cccEEEECCCCCCCCCCCCCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC------------
Q 024230           98 KLNIFVNNVGTSVLKPTLEYNAED-FSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA------------  164 (270)
Q Consensus        98 ~id~li~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~------------  164 (270)
                      .+|++||+|+....      ..++ .++.+++|+.+++++++++.+..   +.++||++||.++..+.            
T Consensus        80 ~~D~Vih~A~~~~~------~~~~~~~~~~~~nv~gt~~ll~aa~~~~---~v~r~V~~SS~~~~~~~~~~~~~~~~~E~  150 (338)
T 2rh8_A           80 GCDFVFHVATPVHF------ASEDPENDMIKPAIQGVVNVMKACTRAK---SVKRVILTSSAAAVTINQLDGTGLVVDEK  150 (338)
T ss_dssp             TCSEEEEESSCCCC---------------CHHHHHHHHHHHHHHHHCT---TCCEEEEECCHHHHHHHHHTCSCCCCCTT
T ss_pred             CCCEEEEeCCccCC------CCCCcHHHHHHHHHHHHHHHHHHHHHcC---CcCEEEEEecHHHeecCCcCCCCcccChh
Confidence            68999999985421      1222 24588999999999999985421   25799999998743210            


Q ss_pred             ---------C---CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHH---hhc-----
Q 024230          165 ---------N---VGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEV---KSR-----  224 (270)
Q Consensus       165 ---------~---~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~---~~~-----  224 (270)
                               +   ....|+.||.+.+.+++.++.+   .|++++.+.|+.+.++.......  .....+   ...     
T Consensus       151 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~~~~~~--~~~~~~~~~~~g~~~~~  225 (338)
T 2rh8_A          151 NWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGSSLTSDVP--SSIGLAMSLITGNEFLI  225 (338)
T ss_dssp             TTTCC-------CCCCCCTTSCCHHHHHHHHHHHH---HTCCEEEEEECEEESCCSSSSCC--HHHHHHHHHHHTCHHHH
T ss_pred             hccchhhccccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCC--chHHHHHHHHcCCcccc
Confidence                     0   1115999999999988887654   38999999999999986543211  111000   000     


Q ss_pred             -------CC--CCCCCChHhHHHHHHHHhCCCCCCccCcEE
Q 024230          225 -------TP--MGRLGEPKEVSSLVAFLCMPAASYITGQTV  256 (270)
Q Consensus       225 -------~~--~~~~~~~~dva~~~~~l~s~~~~~~~G~~i  256 (270)
                             .+  ...+..++|+++++++++...  ...|..+
T Consensus       226 ~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~--~~~~~~~  264 (338)
T 2rh8_A          226 NGMKGMQMLSGSVSIAHVEDVCRAHIFVAEKE--SASGRYI  264 (338)
T ss_dssp             HHHHHHHHHHSSEEEEEHHHHHHHHHHHHHCT--TCCEEEE
T ss_pred             ccccccccccCcccEEEHHHHHHHHHHHHcCC--CcCCcEE
Confidence                   00  013678999999999998642  2345543

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.86  E-value=3e-21  Score=166.38  Aligned_cols=215  Identities=14%  Similarity=0.095  Sum_probs=155.7

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHC--CCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           20 GMTALVTGGTKGLGLAVVEELSML--GATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~--G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      +|+|+||||+|+||++++++|+++  |++|++++|+....+     +..   ++.++.+|++|.+++.+++++      .
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~~---~~~~~~~D~~d~~~~~~~~~~------~   67 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-----VVN---SGPFEVVNALDFNQIEHLVEV------H   67 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-----HHH---SSCEEECCTTCHHHHHHHHHH------T
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-----ccC---CCceEEecCCCHHHHHHHHhh------c
Confidence            578999999999999999999999  899999999866521     111   355789999999998888754      2


Q ss_pred             cccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCC------------
Q 024230           98 KLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSAN------------  165 (270)
Q Consensus        98 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~------------  165 (270)
                      ++|++||+|+.....     ..+++++.+++|+.++.++++++.    +.+.+++|++||...+...+            
T Consensus        68 ~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~  138 (312)
T 2yy7_A           68 KITDIYLMAALLSAT-----AEKNPAFAWDLNMNSLFHVLNLAK----AKKIKKIFWPSSIAVFGPTTPKENTPQYTIME  138 (312)
T ss_dssp             TCCEEEECCCCCHHH-----HHHCHHHHHHHHHHHHHHHHHHHH----TTSCSEEECCEEGGGCCTTSCSSSBCSSCBCC
T ss_pred             CCCEEEECCccCCCc-----hhhChHHHHHHHHHHHHHHHHHHH----HcCCCEEEEeccHHHhCCCCCCCCccccCcCC
Confidence            789999999974321     235577889999999999998884    44557999999987764421            


Q ss_pred             CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC-----hhhHHHHhhcC--------CCCCCCC
Q 024230          166 VGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN-----GKFVDEVKSRT--------PMGRLGE  232 (270)
Q Consensus       166 ~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~-----~~~~~~~~~~~--------~~~~~~~  232 (270)
                      ....|+.+|.+.+.+++.++.++   |++++.+.|+.+..+........     ..+...+....        ....+..
T Consensus       139 ~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  215 (312)
T 2yy7_A          139 PSTVYGISKQAGERWCEYYHNIY---GVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMY  215 (312)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHH---CCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEE
T ss_pred             CCchhHHHHHHHHHHHHHHHHhc---CCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeee
Confidence            24579999999999999988765   79999999999987643221110     01111111111        1112345


Q ss_pred             hHhHHHHHHHHhCCCCCCc-cCcEEeecC
Q 024230          233 PKEVSSLVAFLCMPAASYI-TGQTVCIDG  260 (270)
Q Consensus       233 ~~dva~~~~~l~s~~~~~~-~G~~i~vdg  260 (270)
                      .+|++++++.++....... .|+++++.+
T Consensus       216 v~Dva~a~~~~~~~~~~~~~~~~~~ni~~  244 (312)
T 2yy7_A          216 MDDAIDATINIMKAPVEKIKIHSSYNLAA  244 (312)
T ss_dssp             HHHHHHHHHHHHHSCGGGCCCSSCEECCS
T ss_pred             HHHHHHHHHHHHhCcccccccCceEEeCC
Confidence            7999999999886543222 258888865

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.86  E-value=1.6e-20  Score=171.57  Aligned_cols=226  Identities=16%  Similarity=0.062  Sum_probs=158.6

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHC---CCeEEEeeCChhHHHHHHHHHH---------------hcCCeEEEEEc
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSML---GATVHTCSRTETELNECIHHLQ---------------MKGLKVTGSVC   76 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~---G~~v~l~~r~~~~~~~~~~~~~---------------~~~~~~~~~~~   76 (270)
                      ....++|+||||||+|+||.+++++|+++   |++|++++|+++.........+               ....++.++.+
T Consensus        68 ~~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~  147 (478)
T 4dqv_A           68 GPSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAG  147 (478)
T ss_dssp             CCCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEEC
T ss_pred             CCCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEe
Confidence            35678999999999999999999999999   9999999998765432221111               11357999999


Q ss_pred             cCC------CHHHHHHHHHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc
Q 024230           77 DVS------SRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAA  150 (270)
Q Consensus        77 D~~------~~~~~~~~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g  150 (270)
                      |++      +.++++.++        .++|++||||+.....        .+++.+++|+.++.++++++    .+.+..
T Consensus       148 Dl~~~~~gld~~~~~~~~--------~~~D~Vih~Aa~~~~~--------~~~~~~~~Nv~gt~~ll~aa----~~~~~~  207 (478)
T 4dqv_A          148 DKSEPDLGLDQPMWRRLA--------ETVDLIVDSAAMVNAF--------PYHELFGPNVAGTAELIRIA----LTTKLK  207 (478)
T ss_dssp             CTTSGGGGCCHHHHHHHH--------HHCCEEEECCSSCSBS--------SCCEEHHHHHHHHHHHHHHH----TSSSCC
T ss_pred             ECCCcccCCCHHHHHHHH--------cCCCEEEECccccCCc--------CHHHHHHHHHHHHHHHHHHH----HhCCCC
Confidence            998      555666555        3689999999986541        23456889999999998887    445556


Q ss_pred             EEEEecCccccccCCC----------------------ChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCC
Q 024230          151 SIVLMSSALGIVSANV----------------------GTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFT  208 (270)
Q Consensus       151 ~ii~iss~~~~~~~~~----------------------~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~  208 (270)
                      +||++||...+.....                      ...|+.||.+.+.+++.++.+.   |++++.+.||.+..+-.
T Consensus       208 ~~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ivRpg~v~G~~~  284 (478)
T 4dqv_A          208 PFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC---ALPVAVFRCGMILADTS  284 (478)
T ss_dssp             CEEEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECCSS
T ss_pred             eEEEEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh---CCCeEEEECceeeCCCc
Confidence            8999999765433111                      1339999999999999998764   79999999999987532


Q ss_pred             -ccccCChhhHHHH----hh--cCC---------------CCCCCChHhHHHHHHHHhCCC--CCCccCcEEeecCCcc
Q 024230          209 -EPLLGNGKFVDEV----KS--RTP---------------MGRLGEPKEVSSLVAFLCMPA--ASYITGQTVCIDGGFT  263 (270)
Q Consensus       209 -~~~~~~~~~~~~~----~~--~~~---------------~~~~~~~~dva~~~~~l~s~~--~~~~~G~~i~vdgG~~  263 (270)
                       ........+...+    ..  ..|               .......+|++++++.++...  .....|+++++.++..
T Consensus       285 ~~g~~~~~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~  363 (478)
T 4dqv_A          285 YAGQLNMSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHD  363 (478)
T ss_dssp             SSSCCCTTBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCC
T ss_pred             cCCcCCHHHHHHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCC
Confidence             1111111222211    11  111               112356899999999987531  1234688999988765

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.86  E-value=2.3e-21  Score=169.53  Aligned_cols=222  Identities=13%  Similarity=0.067  Sum_probs=153.4

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      ...+++|+||||||+|+||++++++|+++|++|++++|+.....+....+. ...++.++.+|+.+..            
T Consensus        22 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------   88 (343)
T 2b69_A           22 HMEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI-GHENFELINHDVVEPL------------   88 (343)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT-TCTTEEEEECCTTSCC------------
T ss_pred             ccccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhc-cCCceEEEeCccCChh------------
Confidence            456788999999999999999999999999999999986432111111111 1246888899998752            


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccccc-----------
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVS-----------  163 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~-----------  163 (270)
                      + .++|++||+|+.......    .+++++.+++|+.++.++++++.+    .+ .++|++||...+..           
T Consensus        89 ~-~~~d~vih~A~~~~~~~~----~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~v~~SS~~v~g~~~~~~~~E~~~  158 (343)
T 2b69_A           89 Y-IEVDQIYHLASPASPPNY----MYNPIKTLKTNTIGTLNMLGLAKR----VG-ARLLLASTSEVYGDPEVHPQSEDYW  158 (343)
T ss_dssp             C-CCCSEEEECCSCCSHHHH----TTCHHHHHHHHHHHHHHHHHHHHH----HT-CEEEEEEEGGGGBSCSSSSBCTTCC
T ss_pred             h-cCCCEEEECccccCchhh----hhCHHHHHHHHHHHHHHHHHHHHH----hC-CcEEEECcHHHhCCCCCCCCccccc
Confidence            3 579999999997532211    123467789999999999998853    33 48999999866532           


Q ss_pred             -----CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC--hhhHHHHhhcCC---------C
Q 024230          164 -----ANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN--GKFVDEVKSRTP---------M  227 (270)
Q Consensus       164 -----~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~--~~~~~~~~~~~~---------~  227 (270)
                           ......|+.+|++.+.+++.++.+.   |++++.+.||.+..+........  ..+........+         .
T Consensus       159 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (343)
T 2b69_A          159 GHVNPIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQT  235 (343)
T ss_dssp             CBCCSSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCE
T ss_pred             ccCCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeE
Confidence                 2234579999999999999988764   79999999999988754321110  122222222211         1


Q ss_pred             CCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCccccc
Q 024230          228 GRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       228 ~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                      ..+..++|+++++++++...    .++.+++.+|..++.
T Consensus       236 ~~~v~v~Dva~a~~~~~~~~----~~~~~~i~~~~~~s~  270 (343)
T 2b69_A          236 RAFQYVSDLVNGLVALMNSN----VSSPVNLGNPEEHTI  270 (343)
T ss_dssp             EECEEHHHHHHHHHHHHTSS----CCSCEEESCCCEEEH
T ss_pred             EeeEeHHHHHHHHHHHHhcC----CCCeEEecCCCCCcH
Confidence            23457899999999998643    267899998876543

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.85  E-value=1.5e-20  Score=162.61  Aligned_cols=212  Identities=11%  Similarity=0.073  Sum_probs=153.9

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      ++|+||||||+|+||++++++|+++|++|++++|+.                    .+|++|.+++.+++++.      +
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~--------------------~~D~~d~~~~~~~~~~~------~   55 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------------ELNLLDSRAVHDFFASE------R   55 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------------TCCTTCHHHHHHHHHHH------C
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc--------------------cCCccCHHHHHHHHHhc------C
Confidence            467999999999999999999999999999988763                    26999999888887542      6


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC--------------
Q 024230           99 LNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA--------------  164 (270)
Q Consensus        99 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~--------------  164 (270)
                      +|++||+|+.....   ....++.++.+++|+.++.++++++.    +.+..++|++||...+...              
T Consensus        56 ~d~vih~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~  128 (321)
T 1e6u_A           56 IDQVYLAAAKVGGI---VANNTYPADFIYQNMMIESNIIHAAH----QNDVNKLLFLGSSCIYPKLAKQPMAESELLQGT  128 (321)
T ss_dssp             CSEEEECCCCCCCH---HHHHHCHHHHHHHHHHHHHHHHHHHH----HTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSC
T ss_pred             CCEEEEcCeecCCc---chhhhCHHHHHHHHHHHHHHHHHHHH----HhCCCeEEEEccHHHcCCCCCCCcCccccccCC
Confidence            89999999974311   11234567889999999999998884    3445699999998765321              


Q ss_pred             --CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC----hhhHHHHhh-------cC------
Q 024230          165 --NVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN----GKFVDEVKS-------RT------  225 (270)
Q Consensus       165 --~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~----~~~~~~~~~-------~~------  225 (270)
                        |....|+.+|.+.+.+++.++.+.   +++++.+.|+.+..+........    ..+...+..       ..      
T Consensus       129 ~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g  205 (321)
T 1e6u_A          129 LEPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSG  205 (321)
T ss_dssp             CCGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCS
T ss_pred             CCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCC
Confidence              113489999999999999998764   79999999999988754321111    122222211       11      


Q ss_pred             -CCCCCCChHhHHHHHHHHhCCCCC------CccCcEEeecCCccccc
Q 024230          226 -PMGRLGEPKEVSSLVAFLCMPAAS------YITGQTVCIDGGFTVNG  266 (270)
Q Consensus       226 -~~~~~~~~~dva~~~~~l~s~~~~------~~~G~~i~vdgG~~~~~  266 (270)
                       ....+...+|++++++.++.....      ...|+++++.+|..++.
T Consensus       206 ~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~  253 (321)
T 1e6u_A          206 TPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTI  253 (321)
T ss_dssp             CCEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEH
T ss_pred             CEEEEeEEHHHHHHHHHHHHhCcccccccccccCCceEEeCCCCCccH
Confidence             111244789999999998864321      12478999988765543

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.85  E-value=3e-20  Score=177.25  Aligned_cols=237  Identities=15%  Similarity=0.097  Sum_probs=159.2

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQM-KGLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      ..+++++|+||||||+|+||++++++|+++|++|++++|+.+...+..+.+.. .+.++.++.+|+++.+++.+++++  
T Consensus         5 ~~~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~--   82 (699)
T 1z45_A            5 LQSESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKE--   82 (699)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHH--
T ss_pred             cccccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHh--
Confidence            34678899999999999999999999999999999999875432222222221 134677889999999998888754  


Q ss_pred             HHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC--------
Q 024230           93 SLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA--------  164 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~--------  164 (270)
                          .++|++|||||......    ..+...+.+++|+.++.++++++    ++.+.++||++||...+...        
T Consensus        83 ----~~~D~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~~iV~~SS~~vyg~~~~~~~~~~  150 (699)
T 1z45_A           83 ----YKIDSVIHFAGLKAVGE----STQIPLRYYHNNILGTVVLLELM----QQYNVSKFVFSSSATVYGDATRFPNMIP  150 (699)
T ss_dssp             ----SCCCEEEECCSCCCHHH----HHHSHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCCGGGSTTCCS
T ss_pred             ----CCCCEEEECCcccCcCc----cccCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEECcHHHhCCCccccccCC
Confidence                27999999999754221    12334568999999999998766    44456799999998765321        


Q ss_pred             -------CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC------hhhHH---HHhh-c-CC
Q 024230          165 -------NVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN------GKFVD---EVKS-R-TP  226 (270)
Q Consensus       165 -------~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~------~~~~~---~~~~-~-~~  226 (270)
                             .....|+.+|++++.+++.++.+. ..++++..+.|+.+..+....+...      ..+..   .... . .+
T Consensus       151 ~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  229 (699)
T 1z45_A          151 IPEECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREK  229 (699)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSC
T ss_pred             ccccCCCCCCChHHHHHHHHHHHHHHHHHhc-cCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCc
Confidence                   123579999999999999998775 4689999999988876532221110      11111   1111 0 11


Q ss_pred             C---C------------CCCChHhHHHHHHHHhCCC----CCCccCcEEeecCCcccc
Q 024230          227 M---G------------RLGEPKEVSSLVAFLCMPA----ASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       227 ~---~------------~~~~~~dva~~~~~l~s~~----~~~~~G~~i~vdgG~~~~  265 (270)
                      .   +            .+...+|++++++.++...    ...-.|+++++.+|..+.
T Consensus       230 ~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s  287 (699)
T 1z45_A          230 LYIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGST  287 (699)
T ss_dssp             CCCC------CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEE
T ss_pred             eEEeCCcccCCCCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCc
Confidence            1   1            1235799999998877421    111246789998876544

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.85  E-value=3.7e-21  Score=165.52  Aligned_cols=217  Identities=13%  Similarity=0.098  Sum_probs=153.1

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCC-CeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           22 TALVTGGTKGLGLAVVEELSMLG-ATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G-~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      +||||||+|+||++++++|+++| ++|++++|+++...  ...+..  ..   +.+|+++.+.++++++...  + +++|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~~--~~---~~~d~~~~~~~~~~~~~~~--~-~~~d   70 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLVD--LN---IADYMDKEDFLIQIMAGEE--F-GDVE   70 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHHT--SC---CSEEEEHHHHHHHHHTTCC--C-SSCC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcCc--ce---eccccccHHHHHHHHhccc--c-CCCc
Confidence            48999999999999999999999 89999999765421  111221  11   5689988887776663110  1 2699


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCC-----------CChh
Q 024230          101 IFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSAN-----------VGTV  169 (270)
Q Consensus       101 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~-----------~~~~  169 (270)
                      ++||+|+....      +.+++++.+++|+.++.++++++.+    .+. ++|++||...+...+           ....
T Consensus        71 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~a~~~----~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~  139 (310)
T 1eq2_A           71 AIFHEGACSST------TEWDGKYMMDNNYQYSKELLHYCLE----REI-PFLYASSAATYGGRTSDFIESREYEKPLNV  139 (310)
T ss_dssp             EEEECCSCCCT------TCCCHHHHHHHTHHHHHHHHHHHHH----HTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSH
T ss_pred             EEEECcccccC------cccCHHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCCh
Confidence            99999997543      2234567899999999999998854    345 899999987654322           1457


Q ss_pred             hhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC----ChhhHHHHhhcC---------C-CCCCCChHh
Q 024230          170 YSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG----NGKFVDEVKSRT---------P-MGRLGEPKE  235 (270)
Q Consensus       170 y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~---------~-~~~~~~~~d  235 (270)
                      |+.+|.+.+.+++.++.+   .|++++.+.||.+..+.......    ...+...+....         . ...+...+|
T Consensus       140 Y~~sK~~~e~~~~~~~~~---~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~D  216 (310)
T 1eq2_A          140 YGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGD  216 (310)
T ss_dssp             HHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHH
T ss_pred             hHHHHHHHHHHHHHHHHH---cCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHH
Confidence            999999999999998765   48999999999998875431100    011222111111         1 223456899


Q ss_pred             HHHHHHHHhCCCCCCccCcEEeecCCccccc
Q 024230          236 VSSLVAFLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       236 va~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                      +++++++++....    |+++++.+|..++.
T Consensus       217 va~~~~~~~~~~~----~~~~~i~~~~~~s~  243 (310)
T 1eq2_A          217 VADVNLWFLENGV----SGIFNLGTGRAESF  243 (310)
T ss_dssp             HHHHHHHHHHHCC----CEEEEESCSCCBCH
T ss_pred             HHHHHHHHHhcCC----CCeEEEeCCCccCH
Confidence            9999999986542    88999998876554

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.84  E-value=1.7e-20  Score=158.58  Aligned_cols=197  Identities=15%  Similarity=0.112  Sum_probs=142.6

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      ++|+||||+|+||++++++|+ +|++|++++|+++..         .+     +.+|++|++++.++++.+      ++|
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~---------~~-----~~~Dl~~~~~~~~~~~~~------~~d   59 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEIQ---------GG-----YKLDLTDFPRLEDFIIKK------RPD   59 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCCT---------TC-----EECCTTSHHHHHHHHHHH------CCS
T ss_pred             CEEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcCC---------CC-----ceeccCCHHHHHHHHHhc------CCC
Confidence            369999999999999999999 599999999987421         11     789999999988888653      689


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCC----------CChhh
Q 024230          101 IFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSAN----------VGTVY  170 (270)
Q Consensus       101 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~----------~~~~y  170 (270)
                      ++|||||.....    .+.+++++.+++|+.++.++++++.+    .+ +++|++||..++.+.+          ....|
T Consensus        60 ~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y  130 (273)
T 2ggs_A           60 VIINAAAMTDVD----KCEIEKEKAYKINAEAVRHIVRAGKV----ID-SYIVHISTDYVFDGEKGNYKEEDIPNPINYY  130 (273)
T ss_dssp             EEEECCCCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEEEEGGGSCSSSCSBCTTSCCCCSSHH
T ss_pred             EEEECCcccChh----hhhhCHHHHHHHhHHHHHHHHHHHHH----hC-CeEEEEecceeEcCCCCCcCCCCCCCCCCHH
Confidence            999999975421    23467889999999999999999853    33 5999999998875543          24689


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCC------CCCCCChHhHHHHHHHHh
Q 024230          171 SATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTP------MGRLGEPKEVSSLVAFLC  244 (270)
Q Consensus       171 ~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dva~~~~~l~  244 (270)
                      +.+|++++.+++.         +....+.|+.+..+  ..+  ............+      ......++|+++++++++
T Consensus       131 ~~sK~~~e~~~~~---------~~~~~iR~~~v~G~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~~~  197 (273)
T 2ggs_A          131 GLSKLLGETFALQ---------DDSLIIRTSGIFRN--KGF--PIYVYKTLKEGKTVFAFKGYYSPISARKLASAILELL  197 (273)
T ss_dssp             HHHHHHHHHHHCC---------TTCEEEEECCCBSS--SSH--HHHHHHHHHTTCCEEEESCEECCCBHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhC---------CCeEEEeccccccc--cHH--HHHHHHHHHcCCCEEeecCCCCceEHHHHHHHHHHHH
Confidence            9999999999987         23345555555421  111  0111122222111      345778999999999999


Q ss_pred             CCCCCCccCcEEeecCCcccc
Q 024230          245 MPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       245 s~~~~~~~G~~i~vdgG~~~~  265 (270)
                      +...   +| ++++++ ..++
T Consensus       198 ~~~~---~g-~~~i~~-~~~s  213 (273)
T 2ggs_A          198 ELRK---TG-IIHVAG-ERIS  213 (273)
T ss_dssp             HHTC---CE-EEECCC-CCEE
T ss_pred             hcCc---CC-eEEECC-Cccc
Confidence            7542   44 889988 5544

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.84  E-value=4.5e-20  Score=157.19  Aligned_cols=200  Identities=13%  Similarity=0.022  Sum_probs=147.2

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHC--CCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           21 MTALVTGGTKGLGLAVVEELSML--GATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~--G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      |+|+||||+|+||++++++|+++  |++|++++|+++..+.+.    .  ..+.++.+|++|.+++.+++        ..
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~----~--~~~~~~~~D~~d~~~l~~~~--------~~   66 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA----D--QGVEVRHGDYNQPESLQKAF--------AG   66 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH----H--TTCEEEECCTTCHHHHHHHT--------TT
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh----h--cCCeEEEeccCCHHHHHHHH--------hc
Confidence            57999999999999999999999  999999999877654322    2  24678899999998887776        46


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHHH
Q 024230           99 LNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMN  178 (270)
Q Consensus        99 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal~  178 (270)
                      +|++||+|+...       . +      ++|+.++.++++++    .+.+.++||++||..++.   ....|+.+|.+.+
T Consensus        67 ~d~vi~~a~~~~-------~-~------~~n~~~~~~l~~a~----~~~~~~~~v~~Ss~~~~~---~~~~y~~~K~~~E  125 (287)
T 2jl1_A           67 VSKLLFISGPHY-------D-N------TLLIVQHANVVKAA----RDAGVKHIAYTGYAFAEE---SIIPLAHVHLATE  125 (287)
T ss_dssp             CSEEEECCCCCS-------C-H------HHHHHHHHHHHHHH----HHTTCSEEEEEEETTGGG---CCSTHHHHHHHHH
T ss_pred             CCEEEEcCCCCc-------C-c------hHHHHHHHHHHHHH----HHcCCCEEEEECCCCCCC---CCCchHHHHHHHH
Confidence            899999998521       1 1      57888988888877    445567999999987652   2347999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHh----hcCCCCCCCChHhHHHHHHHHhCCCCCCccCc
Q 024230          179 QLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVK----SRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ  254 (270)
Q Consensus       179 ~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  254 (270)
                      .+++.       .|++++.+.||++.++....+.  ......-.    .......+..++|+++++.+++...  ..+|+
T Consensus       126 ~~~~~-------~~~~~~ilrp~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~--~~~g~  194 (287)
T 2jl1_A          126 YAIRT-------TNIPYTFLRNALYTDFFVNEGL--RASTESGAIVTNAGSGIVNSVTRNELALAAATVLTEE--GHENK  194 (287)
T ss_dssp             HHHHH-------TTCCEEEEEECCBHHHHSSGGG--HHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHTSS--SCTTE
T ss_pred             HHHHH-------cCCCeEEEECCEeccccchhhH--HHHhhCCceeccCCCCccCccCHHHHHHHHHHHhcCC--CCCCc
Confidence            98863       5899999999988765411111  01111000    0112235678999999999999653  24799


Q ss_pred             EEeecCCccccc
Q 024230          255 TVCIDGGFTVNG  266 (270)
Q Consensus       255 ~i~vdgG~~~~~  266 (270)
                      ++++.||..++.
T Consensus       195 ~~~i~~~~~~s~  206 (287)
T 2jl1_A          195 TYNLVSNQPWTF  206 (287)
T ss_dssp             EEEECCSSCBCH
T ss_pred             EEEecCCCcCCH
Confidence            999999876554

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.84  E-value=1.1e-20  Score=161.19  Aligned_cols=196  Identities=16%  Similarity=0.187  Sum_probs=146.6

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcccE
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNI  101 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~  101 (270)
                      +||||||+|+||++++++|+++|++|++++|.                     .+|++|.+++.++++..      ++|+
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------------~~D~~d~~~~~~~~~~~------~~d~   59 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK---------------------LLDITNISQVQQVVQEI------RPHI   59 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT---------------------TSCTTCHHHHHHHHHHH------CCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc---------------------ccCCCCHHHHHHHHHhc------CCCE
Confidence            89999999999999999999999999999982                     37999999988888653      6899


Q ss_pred             EEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC-----------CCChhh
Q 024230          102 FVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA-----------NVGTVY  170 (270)
Q Consensus       102 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~-----------~~~~~y  170 (270)
                      +||+|+......    ..+++++.+++|+.++.++++++.+    .+ .++|++||...+.+.           .....|
T Consensus        60 vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y  130 (287)
T 3sc6_A           60 IIHCAAYTKVDQ----AEKERDLAYVINAIGARNVAVASQL----VG-AKLVYISTDYVFQGDRPEGYDEFHNPAPINIY  130 (287)
T ss_dssp             EEECCCCCCHHH----HTTCHHHHHHHHTHHHHHHHHHHHH----HT-CEEEEEEEGGGSCCCCSSCBCTTSCCCCCSHH
T ss_pred             EEECCcccChHH----HhcCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEchhhhcCCCCCCCCCCCCCCCCCCHH
Confidence            999999864211    1235678899999999999999843    33 379999998766432           124589


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCC-------CCCCCChHhHHHHHHHH
Q 024230          171 SATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTP-------MGRLGEPKEVSSLVAFL  243 (270)
Q Consensus       171 ~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~dva~~~~~l  243 (270)
                      +.+|.+.+.+++.++.       ++..+.|+.+..+....+.  ...........+       ......++|++++++++
T Consensus       131 ~~sK~~~E~~~~~~~~-------~~~ilR~~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  201 (287)
T 3sc6_A          131 GASKYAGEQFVKELHN-------KYFIVRTSWLYGKYGNNFV--KTMIRLGKEREEISVVADQIGSPTYVADLNVMINKL  201 (287)
T ss_dssp             HHHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCHH--HHHHHHHTTCSEEEEECSCEECCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCC-------CcEEEeeeeecCCCCCcHH--HHHHHHHHcCCCeEeecCcccCceEHHHHHHHHHHH
Confidence            9999999999988643       4678999998876433221  122222221211       12344599999999999


Q ss_pred             hCCCCCCccCcEEeecCCccccc
Q 024230          244 CMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       244 ~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                      +....    ++++++.+|..++.
T Consensus       202 ~~~~~----~~~~~i~~~~~~s~  220 (287)
T 3sc6_A          202 IHTSL----YGTYHVSNTGSCSW  220 (287)
T ss_dssp             HTSCC----CEEEECCCBSCEEH
T ss_pred             HhCCC----CCeEEEcCCCcccH
Confidence            97643    67999999876554

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.84  E-value=6.2e-20  Score=157.87  Aligned_cols=217  Identities=14%  Similarity=0.070  Sum_probs=152.8

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      ..+++|+||||||+|+||++++++|+++|+      +...           ....+..+.+|++|.+++.++++.     
T Consensus         2 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~-----------~~~~~~~~~~D~~d~~~~~~~~~~-----   59 (319)
T 4b8w_A            2 LYFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGE-----------DWVFVSSKDADLTDTAQTRALFEK-----   59 (319)
T ss_dssp             CCCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTC-----------EEEECCTTTCCTTSHHHHHHHHHH-----
T ss_pred             ccccCCeEEEECCCcHHHHHHHHHHHhcCC------cccc-----------cccccCceecccCCHHHHHHHHhh-----
Confidence            457889999999999999999999999998      1100           001233346899999998888864     


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC-----------
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA-----------  164 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~-----------  164 (270)
                       .++|++||+|+......   .+.++..+.+++|+.++.++++++    .+.+..++|++||...+...           
T Consensus        60 -~~~d~Vih~A~~~~~~~---~~~~~~~~~~~~nv~gt~~ll~a~----~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~  131 (319)
T 4b8w_A           60 -VQPTHVIHLAAMVGGLF---RNIKYNLDFWRKNVHMNDNVLHSA----FEVGARKVVSCLSTCIFPDKTTYPIDETMIH  131 (319)
T ss_dssp             -SCCSEEEECCCCCCCHH---HHTTCHHHHHHHHHHHHHHHHHHH----HHTTCSEEEEECCGGGSCSSCCSSBCGGGGG
T ss_pred             -cCCCEEEECceeccccc---ccccCHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEEcchhhcCCCCCCCccccccc
Confidence             36999999999843111   122335677999999999998887    44555689999998765321           


Q ss_pred             -----CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC----hhhHHH----HhhcCCC----
Q 024230          165 -----NVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN----GKFVDE----VKSRTPM----  227 (270)
Q Consensus       165 -----~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~----~~~~~~----~~~~~~~----  227 (270)
                           |....|+.+|.+.+.+++.++.+.   |+++..+.|+.+..+........    +.+...    .....+.    
T Consensus       132 ~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (319)
T 4b8w_A          132 NGPPHNSNFGYSYAKRMIDVQNRAYFQQY---GCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWG  208 (319)
T ss_dssp             BSCCCSSSHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEES
T ss_pred             cCCCCCCcchHHHHHHHHHHHHHHHHHhh---CCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeC
Confidence                 222369999999999999998774   79999999999988754321111    122232    2222221    


Q ss_pred             -----CCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCccccc
Q 024230          228 -----GRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       228 -----~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                           ..+..++|++++++.++.... ...|+++++.+|..++.
T Consensus       209 ~g~~~~~~i~v~Dva~a~~~~~~~~~-~~~~~~~ni~~~~~~s~  251 (319)
T 4b8w_A          209 TGNPRRQFIYSLDLAQLFIWVLREYN-EVEPIILSVGEEDEVSI  251 (319)
T ss_dssp             CSCCEECEEEHHHHHHHHHHHHHHCC-CSSCEEECCCGGGCEEH
T ss_pred             CCCeeEEEEeHHHHHHHHHHHHhccc-cCCceEEEecCCCceeH
Confidence                 123578999999999986532 24678999988766543

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.84  E-value=4.5e-20  Score=159.42  Aligned_cols=211  Identities=16%  Similarity=0.118  Sum_probs=150.0

Q ss_pred             EEEEecCCCcHHHHHHHHHHHC--CCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           22 TALVTGGTKGLGLAVVEELSML--GATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~--G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      +||||||+|+||++++++|+++  |++|++++|+.+..+           .+.++.+|++|.+++.+++++      .++
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----------~~~~~~~D~~d~~~~~~~~~~------~~~   63 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-----------GIKFITLDVSNRDEIDRAVEK------YSI   63 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-----------TCCEEECCTTCHHHHHHHHHH------TTC
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-----------CceEEEecCCCHHHHHHHHhh------cCC
Confidence            4899999999999999999999  899999998765421           345788999999998888764      379


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCC------------CC
Q 024230          100 NIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSAN------------VG  167 (270)
Q Consensus       100 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~------------~~  167 (270)
                      |++||+|+....     ...+++++.+++|+.++.++++++.    +.+.+++|++||...+.+..            ..
T Consensus        64 d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~  134 (317)
T 3ajr_A           64 DAIFHLAGILSA-----KGEKDPALAYKVNMNGTYNILEAAK----QHRVEKVVIPSTIGVFGPETPKNKVPSITITRPR  134 (317)
T ss_dssp             CEEEECCCCCHH-----HHHHCHHHHHHHHHHHHHHHHHHHH----HTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCC
T ss_pred             cEEEECCcccCC-----ccccChHHHhhhhhHHHHHHHHHHH----HcCCCEEEEecCHHHhCCCCCCCCccccccCCCC
Confidence            999999997432     1234577889999999999999884    34557999999988765421            25


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC-Chh----hHHHHhhcC---C-----CCCCCChH
Q 024230          168 TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG-NGK----FVDEVKSRT---P-----MGRLGEPK  234 (270)
Q Consensus       168 ~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~-~~~----~~~~~~~~~---~-----~~~~~~~~  234 (270)
                      ..|+.+|.+.+.+++.++.+.   |++++.+.|+.+..+....... ...    +...+....   .     .......+
T Consensus       135 ~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  211 (317)
T 3ajr_A          135 TMFGVTKIAAELLGQYYYEKF---GLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMP  211 (317)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHH
T ss_pred             chHHHHHHHHHHHHHHHHHhc---CCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHH
Confidence            689999999999999987653   7999999866554432111000 011    111111111   0     01123579


Q ss_pred             hHHHHHHHHhCCCC-CCccCcEEeecCC
Q 024230          235 EVSSLVAFLCMPAA-SYITGQTVCIDGG  261 (270)
Q Consensus       235 dva~~~~~l~s~~~-~~~~G~~i~vdgG  261 (270)
                      |++++++.++.... ...+|+++++.|+
T Consensus       212 Dva~a~~~~l~~~~~~~~~g~~~~i~~~  239 (317)
T 3ajr_A          212 DALKALVDLYEADRDKLVLRNGYNVTAY  239 (317)
T ss_dssp             HHHHHHHHHHHCCGGGCSSCSCEECCSE
T ss_pred             HHHHHHHHHHhCCccccccCceEecCCc
Confidence            99999988875432 2345789999763

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.83  E-value=5.7e-21  Score=163.72  Aligned_cols=204  Identities=15%  Similarity=0.092  Sum_probs=148.9

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      ++|+||||+|+||++++++|+ +|++|++++|++.                 .+.+|++|.+++.++++..      ++|
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-----------------~~~~D~~d~~~~~~~~~~~------~~d   56 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-----------------EFCGDFSNPKGVAETVRKL------RPD   56 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-----------------SSCCCTTCHHHHHHHHHHH------CCS
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-----------------cccccCCCHHHHHHHHHhc------CCC
Confidence            379999999999999999999 8999999999762                 2468999999888887642      689


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCC-----------CChh
Q 024230          101 IFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSAN-----------VGTV  169 (270)
Q Consensus       101 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~-----------~~~~  169 (270)
                      ++||+|+.....    .+.+++++.+++|+.++.++++++    .+.+ .++|++||...+.+.+           ....
T Consensus        57 ~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~----~~~~-~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~  127 (299)
T 1n2s_A           57 VIVNAAAHTAVD----KAESEPELAQLLNATSVEAIAKAA----NETG-AWVVHYSTDYVFPGTGDIPWQETDATSPLNV  127 (299)
T ss_dssp             EEEECCCCCCHH----HHTTCHHHHHHHHTHHHHHHHHHH----TTTT-CEEEEEEEGGGSCCCTTCCBCTTSCCCCSSH
T ss_pred             EEEECcccCCHh----hhhcCHHHHHHHHHHHHHHHHHHH----HHcC-CcEEEEecccEEeCCCCCCCCCCCCCCCccH
Confidence            999999975321    112345678999999999999988    3333 3899999987654332           1457


Q ss_pred             hhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCC-------CCCCChHhHHHHHHH
Q 024230          170 YSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPM-------GRLGEPKEVSSLVAF  242 (270)
Q Consensus       170 y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~dva~~~~~  242 (270)
                      |+.+|.+.+.+++.++.       +++.+.|+.+..+....+.  ...........+.       .....++|+++++.+
T Consensus       128 Y~~sK~~~E~~~~~~~~-------~~~ilRp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  198 (299)
T 1n2s_A          128 YGKTKLAGEKALQDNCP-------KHLIFRTSWVYAGKGNNFA--KTMLRLAKERQTLSVINDQYGAPTGAELLADCTAH  198 (299)
T ss_dssp             HHHHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCHH--HHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCC-------CeEEEeeeeecCCCcCcHH--HHHHHHHhcCCCEEeecCcccCCeeHHHHHHHHHH
Confidence            99999999999987642       7899999999887543221  1222222222211       234458999999999


Q ss_pred             HhCCCCCCc-cCcEEeecCCccccc
Q 024230          243 LCMPAASYI-TGQTVCIDGGFTVNG  266 (270)
Q Consensus       243 l~s~~~~~~-~G~~i~vdgG~~~~~  266 (270)
                      ++....... .|+++++.+|..++.
T Consensus       199 ~~~~~~~~~~~~~~~~i~~~~~~s~  223 (299)
T 1n2s_A          199 AIRVALNKPEVAGLYHLVAGGTTTW  223 (299)
T ss_dssp             HHHHHHHCGGGCEEEECCCBSCEEH
T ss_pred             HHHHhccccccCceEEEeCCCCCCH
Confidence            986432122 589999999876543

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.83  E-value=4.8e-20  Score=169.68  Aligned_cols=220  Identities=11%  Similarity=0.045  Sum_probs=158.2

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhH---HHHHHHHHHh---------cCCeEEEEEccCCCHHHHHHH
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETE---LNECIHHLQM---------KGLKVTGSVCDVSSRPQRQTL   87 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~---~~~~~~~~~~---------~~~~~~~~~~D~~~~~~~~~~   87 (270)
                      .|+||||||+|+||++++++|.++|++|++++|++..   .+++.+.+..         ...++.++.+|+++++++.  
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~--  227 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV--  227 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC--
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC--
Confidence            4799999999999999999999999999999998773   2333333221         2467999999999977766  


Q ss_pred             HHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccc--ccc--
Q 024230           88 INTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALG--IVS--  163 (270)
Q Consensus        88 ~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~--~~~--  163 (270)
                            .. .++|+|||||+....       ...+++.+++|+.++.++++++.+     +..++|++||...  +..  
T Consensus       228 ------~~-~~~D~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~-----~~~~~v~iSS~~vG~~~~~~  288 (508)
T 4f6l_B          228 ------LP-ENMDTIIHAGARTDH-------FGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISVGTYFDID  288 (508)
T ss_dssp             ------CS-SCCSEEEECCCC---------------CCHHHHHHHHHHHHHHHHT-----TTCEEEEEEESCTTSEECTT
T ss_pred             ------Cc-cCCCEEEECCceecC-------CCCHHHHhhhHHHHHHHHHHHHHh-----CCCcEEEeCChhhccCCccC
Confidence                  22 689999999997531       234567788999999999998843     4578999999876  100  


Q ss_pred             --------------CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC-------hhhHHHHh
Q 024230          164 --------------ANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN-------GKFVDEVK  222 (270)
Q Consensus       164 --------------~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~-------~~~~~~~~  222 (270)
                                    ......|+.+|.+.+.+++.++.    .|++++.+.||.+..+....+...       ........
T Consensus       289 ~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~  364 (508)
T 4f6l_B          289 TEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLL  364 (508)
T ss_dssp             CSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH----TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHT
T ss_pred             CcCcccccccccccccCCCcHHHHHHHHHHHHHHHHH----cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHH
Confidence                          11356799999999999988653    599999999999988765544211       11222222


Q ss_pred             hcCCC--------CCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCcccccc
Q 024230          223 SRTPM--------GRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNGF  267 (270)
Q Consensus       223 ~~~~~--------~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~  267 (270)
                      .....        ..+..++|+|+++++++....   .|+++++.+|..+.+-
T Consensus       365 ~~~~~~~~~g~~~~~~v~v~DvA~ai~~~~~~~~---~~~~~nl~~~~~~s~~  414 (508)
T 4f6l_B          365 QLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSPNKMPVK  414 (508)
T ss_dssp             TCSEEETTGGGSEEECEEHHHHHHHHHHHTTBCC---SCSEEEESCSCEEEHH
T ss_pred             HcCCCCCCccCceEEEEcHHHHHHHHHHHHhCCC---CCCEEEeCCCCCCCHH
Confidence            11111        124468999999999997543   8999999999876543

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.83  E-value=5.5e-21  Score=163.04  Aligned_cols=202  Identities=12%  Similarity=0.078  Sum_probs=148.5

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      ++|+||||| +|+||++++++|+++|++|++++|+.+..          ...+.++.+|++|.+++.++++       ++
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~----------~~~~~~~~~Dl~d~~~~~~~~~-------~~   63 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM----------PAGVQTLIADVTRPDTLASIVH-------LR   63 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC----------CTTCCEEECCTTCGGGCTTGGG-------GC
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc----------ccCCceEEccCCChHHHHHhhc-------CC
Confidence            467999999 59999999999999999999999987652          2457788999999988777663       36


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCC-----------CC
Q 024230           99 LNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSAN-----------VG  167 (270)
Q Consensus        99 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~-----------~~  167 (270)
                      +|++||+|+..         ..+.++.+++|+.++.++++++    .+.+.+++|++||...+....           ..
T Consensus        64 ~d~vih~a~~~---------~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~  130 (286)
T 3gpi_A           64 PEILVYCVAAS---------EYSDEHYRLSYVEGLRNTLSAL----EGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAK  130 (286)
T ss_dssp             CSEEEECHHHH---------HHC-----CCSHHHHHHHHHHT----TTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCC
T ss_pred             CCEEEEeCCCC---------CCCHHHHHHHHHHHHHHHHHHH----hhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCC
Confidence            99999999862         2345677889999999998887    455567999999987654322           24


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhh------cCCCCCCCChHhHHHHHH
Q 024230          168 TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKS------RTPMGRLGEPKEVSSLVA  241 (270)
Q Consensus       168 ~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~dva~~~~  241 (270)
                      ..|+.+|.+.+.+ +..        ++++.+.|+.+..+....+      ...+..      ......+..++|++++++
T Consensus       131 ~~Y~~sK~~~E~~-~~~--------~~~~ilR~~~v~G~~~~~~------~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  195 (286)
T 3gpi_A          131 DFSGKRMLEAEAL-LAA--------YSSTILRFSGIYGPGRLRM------IRQAQTPEQWPARNAWTNRIHRDDGAAFIA  195 (286)
T ss_dssp             SHHHHHHHHHHHH-GGG--------SSEEEEEECEEEBTTBCHH------HHHTTCGGGSCSSBCEECEEEHHHHHHHHH
T ss_pred             ChhhHHHHHHHHH-Hhc--------CCeEEEecccccCCCchhH------HHHHHhcccCCCcCceeEEEEHHHHHHHHH
Confidence            5799999999988 542        8899999999987754322      111111      111223456899999999


Q ss_pred             HHhCCCCCCccCcEEeecCCccccc
Q 024230          242 FLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       242 ~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                      +++........|+++++.+|..++.
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~s~  220 (286)
T 3gpi_A          196 YLIQQRSHAVPERLYIVTDNQPLPV  220 (286)
T ss_dssp             HHHHHHTTSCCCSEEEECCSCCEEH
T ss_pred             HHHhhhccCCCCceEEEeCCCCCCH
Confidence            9997532345799999998876543

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.83  E-value=3.4e-21  Score=166.46  Aligned_cols=216  Identities=14%  Similarity=0.088  Sum_probs=143.4

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHh--cCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQM--KGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      ++++|+||||||+|+||++++++|+++|++|++++|+..........+..  ....+.++.+|+                
T Consensus         4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl----------------   67 (321)
T 3vps_A            4 NTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDL----------------   67 (321)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHH----------------
T ss_pred             ccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCcc----------------
Confidence            46789999999999999999999999999999999976521000000000  001122222222                


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCC---------
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSAN---------  165 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~---------  165 (270)
                        .++|++||+|+........+    +..+.++ |+.++.++++++.    +.+..++|++||...+....         
T Consensus        68 --~~~d~vi~~a~~~~~~~~~~----~~~~~~~-n~~~~~~ll~a~~----~~~v~~~v~~SS~~v~~~~~~~~~~E~~~  136 (321)
T 3vps_A           68 --SDVRLVYHLASHKSVPRSFK----QPLDYLD-NVDSGRHLLALCT----SVGVPKVVVGSTCEVYGQADTLPTPEDSP  136 (321)
T ss_dssp             --TTEEEEEECCCCCCHHHHTT----STTTTHH-HHHHHHHHHHHHH----HHTCCEEEEEEEGGGGCSCSSSSBCTTSC
T ss_pred             --ccCCEEEECCccCChHHHHh----CHHHHHH-HHHHHHHHHHHHH----HcCCCeEEEecCHHHhCCCCCCCCCCCCC
Confidence              27899999999764211111    1123456 9999999988884    34457999999987654432         


Q ss_pred             --CChhhhhhHHHHHHHHHHHHHHHccCCc-eEEEEecCcccCCCCccccCChhhHHHHhhcCC---------CCCCCCh
Q 024230          166 --VGTVYSATKGAMNQLAKNLACEWAKDNI-RTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTP---------MGRLGEP  233 (270)
Q Consensus       166 --~~~~y~~sKaal~~~~~sla~el~~~~i-~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~  233 (270)
                        ....|+.+|.+.+.+++.++.+   .++ +++.+.|+.+..+..........+........+         ...+..+
T Consensus       137 ~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  213 (321)
T 3vps_A          137 LSPRSPYAASKVGLEMVAGAHQRA---SVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYI  213 (321)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHS---SSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEH
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHH---cCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEH
Confidence              2467999999999999998865   578 999999999988754331111222222222211         1234578


Q ss_pred             HhHHHHHHHHhCCCCCCccCcEEeecCCccccc
Q 024230          234 KEVSSLVAFLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       234 ~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                      +|+++++++++....   .| ++++.+|..++.
T Consensus       214 ~Dva~~~~~~~~~~~---~g-~~~i~~~~~~s~  242 (321)
T 3vps_A          214 TDVVDKLVALANRPL---PS-VVNFGSGQSLSV  242 (321)
T ss_dssp             HHHHHHHHHGGGSCC---CS-EEEESCSCCEEH
T ss_pred             HHHHHHHHHHHhcCC---CC-eEEecCCCcccH
Confidence            999999999997653   37 999999886654

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.81  E-value=7e-20  Score=155.84  Aligned_cols=196  Identities=11%  Similarity=0.057  Sum_probs=138.6

Q ss_pred             EEEEecCCCcHHHHHHHHHHHC--CCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           22 TALVTGGTKGLGLAVVEELSML--GATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~--G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      +|+||||+|+||++++++|+++  |++|++++|+++..+.+.    .  ..+.++.+|++|++++.+++        ..+
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~----~--~~~~~~~~D~~d~~~~~~~~--------~~~   66 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA----A--QGITVRQADYGDEAALTSAL--------QGV   66 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH----H--TTCEEEECCTTCHHHHHHHT--------TTC
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh----c--CCCeEEEcCCCCHHHHHHHH--------hCC
Confidence            4899999999999999999999  999999999877654322    2  24677899999998877766        468


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHHHH
Q 024230          100 NIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQ  179 (270)
Q Consensus       100 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal~~  179 (270)
                      |++||+|+...                ..|+.++.++++++    .+.+.++||++||..++.   ....|+.+|.+.+.
T Consensus        67 d~vi~~a~~~~----------------~~~~~~~~~l~~a~----~~~~~~~~v~~Ss~~~~~---~~~~y~~sK~~~e~  123 (286)
T 2zcu_A           67 EKLLLISSSEV----------------GQRAPQHRNVINAA----KAAGVKFIAYTSLLHADT---SPLGLADEHIETEK  123 (286)
T ss_dssp             SEEEECC------------------------CHHHHHHHHH----HHHTCCEEEEEEETTTTT---CCSTTHHHHHHHHH
T ss_pred             CEEEEeCCCCc----------------hHHHHHHHHHHHHH----HHcCCCEEEEECCCCCCC---CcchhHHHHHHHHH
Confidence            99999998521                02555666665555    555567999999987762   23479999999999


Q ss_pred             HHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHH--H--hhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcE
Q 024230          180 LAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDE--V--KSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT  255 (270)
Q Consensus       180 ~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  255 (270)
                      +++.       .|++++.+.||++.+++...+   ......  +  ........+..++|+++++.+++....  .+|+.
T Consensus       124 ~~~~-------~~~~~~ilrp~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~g~~  191 (286)
T 2zcu_A          124 MLAD-------SGIVYTLLRNGWYSENYLASA---PAALEHGVFIGAAGDGKIASATRADYAAAAARVISEAG--HEGKV  191 (286)
T ss_dssp             HHHH-------HCSEEEEEEECCBHHHHHTTH---HHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHHSSS--CTTCE
T ss_pred             HHHH-------cCCCeEEEeChHHhhhhHHHh---HHhhcCCceeccCCCCccccccHHHHHHHHHHHhcCCC--CCCce
Confidence            8864       489999999998776532111   010100  0  001122346689999999999997532  48999


Q ss_pred             EeecCCccccc
Q 024230          256 VCIDGGFTVNG  266 (270)
Q Consensus       256 i~vdgG~~~~~  266 (270)
                      +++.||..++.
T Consensus       192 ~~i~~~~~~s~  202 (286)
T 2zcu_A          192 YELAGDSAWTL  202 (286)
T ss_dssp             EEECCSSCBCH
T ss_pred             EEEeCCCcCCH
Confidence            99999866543

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.79  E-value=6.8e-19  Score=150.96  Aligned_cols=205  Identities=13%  Similarity=0.021  Sum_probs=139.0

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCC-CeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLG-ATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G-~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      .|+|+||||+|+||++++++|+++| ++|++++|+++....  ..+...  .+.++.+|++|++++.+++        ..
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~~--~~~~~~~D~~d~~~l~~~~--------~~   72 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRLQ--GAEVVQGDQDDQVIMELAL--------NG   72 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHHT--TCEEEECCTTCHHHHHHHH--------TT
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHHC--CCEEEEecCCCHHHHHHHH--------hc
Confidence            5899999999999999999999999 999999998765421  223332  4677899999999888777        46


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC--CCChhhhhhHHH
Q 024230           99 LNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA--NVGTVYSATKGA  176 (270)
Q Consensus        99 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~--~~~~~y~~sKaa  176 (270)
                      +|++||+++.....            ..+.|+.+...+    ++.+++.+.++||++|+...+...  +....|+.+|.+
T Consensus        73 ~d~vi~~a~~~~~~------------~~~~~~~~~~~~----~~aa~~~gv~~iv~~S~~~~~~~~~~~~~~~y~~sK~~  136 (299)
T 2wm3_A           73 AYATFIVTNYWESC------------SQEQEVKQGKLL----ADLARRLGLHYVVYSGLENIKKLTAGRLAAAHFDGKGE  136 (299)
T ss_dssp             CSEEEECCCHHHHT------------CHHHHHHHHHHH----HHHHHHHTCSEEEECCCCCHHHHTTTSCCCHHHHHHHH
T ss_pred             CCEEEEeCCCCccc------------cchHHHHHHHHH----HHHHHHcCCCEEEEEcCccccccCCCcccCchhhHHHH
Confidence            89999999842110            123444444444    444566667799996654433211  124579999999


Q ss_pred             HHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHH-HHhhcCCC----CCCCChHhHHHHHHHHhCCCCCCc
Q 024230          177 MNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVD-EVKSRTPM----GRLGEPKEVSSLVAFLCMPAASYI  251 (270)
Q Consensus       177 l~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~dva~~~~~l~s~~~~~~  251 (270)
                      ++.+.+.       .|++++.+.||++.+++...+........ ......+.    ..+..++|+++++..++.... ..
T Consensus       137 ~e~~~~~-------~gi~~~ilrp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~-~~  208 (299)
T 2wm3_A          137 VEEYFRD-------IGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPE-KY  208 (299)
T ss_dssp             HHHHHHH-------HTCCEEEEECCEEGGGGGTTTCCEECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHH-HH
T ss_pred             HHHHHHH-------CCCCEEEEeecHHhhhchhhcCCcccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChh-hh
Confidence            9998865       37999999999998875432211000000 00001111    134579999999999986422 23


Q ss_pred             cCcEEeecC
Q 024230          252 TGQTVCIDG  260 (270)
Q Consensus       252 ~G~~i~vdg  260 (270)
                      .|+.+.+.|
T Consensus       209 ~g~~~~~~g  217 (299)
T 2wm3_A          209 VGQNIGLST  217 (299)
T ss_dssp             TTCEEECCS
T ss_pred             CCeEEEeee
Confidence            789999986

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.78  E-value=1.1e-18  Score=153.47  Aligned_cols=206  Identities=14%  Similarity=0.047  Sum_probs=140.7

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEcc-CCCHHHHHHHHHHHHHHcC
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD-VSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D-~~~~~~~~~~~~~i~~~~~   96 (270)
                      +++|+|+||||+|+||++++++|+++|++|++++|+++...  .+.+.. ...+.++.+| ++|++++.+++        
T Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~-~~~v~~v~~D~l~d~~~l~~~~--------   71 (352)
T 1xgk_A            3 QQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQA-IPNVTLFQGPLLNNVPLMDTLF--------   71 (352)
T ss_dssp             CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHT-STTEEEEESCCTTCHHHHHHHH--------
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhh-cCCcEEEECCccCCHHHHHHHH--------
Confidence            45789999999999999999999999999999999877542  122322 2357788999 99999888776        


Q ss_pred             CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCcc-ccccCCCChhhhhhH
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSAL-GIVSANVGTVYSATK  174 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~-~~~~~~~~~~y~~sK  174 (270)
                      ..+|++|||++....               ..|..+ .+++    +.+++.+ .++||++||.. +..+.+....|+.+|
T Consensus        72 ~~~d~Vi~~a~~~~~---------------~~~~~~-~~l~----~aa~~~g~v~~~V~~SS~~~~~~~~~~~~~y~~sK  131 (352)
T 1xgk_A           72 EGAHLAFINTTSQAG---------------DEIAIG-KDLA----DAAKRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPK  131 (352)
T ss_dssp             TTCSEEEECCCSTTS---------------CHHHHH-HHHH----HHHHHHSCCSEEEEEECCCGGGTSSCCCCTTTHHH
T ss_pred             hcCCEEEEcCCCCCc---------------HHHHHH-HHHH----HHHHHcCCccEEEEeCCccccccCCCCCccHHHHH
Confidence            468999999875321               124443 4444    4445555 67999999986 333434456799999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChh----hHHHHhhcCC-----CCCCCCh-HhHHHHHHHHh
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGK----FVDEVKSRTP-----MGRLGEP-KEVSSLVAFLC  244 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~----~~~~~~~~~~-----~~~~~~~-~dva~~~~~l~  244 (270)
                      ++.+.+++.+       |++++.+.||++...........-.    ....+....+     .....++ +|+++++..++
T Consensus       132 ~~~E~~~~~~-------gi~~~ivrpg~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l  204 (352)
T 1xgk_A          132 FTVENYVRQL-------GLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIF  204 (352)
T ss_dssp             HHHHHHHHTS-------SSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHc-------CCCEEEEecceecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHH
Confidence            9999998763       8999999999876544322100000    0000000001     1124467 89999999999


Q ss_pred             CCCCCCccCcEEeecCC
Q 024230          245 MPAASYITGQTVCIDGG  261 (270)
Q Consensus       245 s~~~~~~~G~~i~vdgG  261 (270)
                      .+......|+++++.++
T Consensus       205 ~~~~~~~~g~~~~l~~~  221 (352)
T 1xgk_A          205 KDGPQKWNGHRIALTFE  221 (352)
T ss_dssp             HHCHHHHTTCEEEECSE
T ss_pred             hCCchhhCCeEEEEecC
Confidence            65333457899999865

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.78  E-value=3.8e-18  Score=145.55  Aligned_cols=198  Identities=13%  Similarity=0.081  Sum_probs=135.3

Q ss_pred             EEEEecCCCcHHHHHHHHHHHC-CCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           22 TALVTGGTKGLGLAVVEELSML-GATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~-G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      +||||||+|+||++++++|+++ |++|++++|++++...+      ....+.++.+|++|++++.+++        ..+|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~------~~~~v~~~~~D~~d~~~l~~~~--------~~~d   67 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD------WRGKVSVRQLDYFNQESMVEAF--------KGMD   67 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG------GBTTBEEEECCTTCHHHHHHHT--------TTCS
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh------hhCCCEEEEcCCCCHHHHHHHH--------hCCC
Confidence            6999999999999999999998 99999999998764322      1245888999999998887776        5789


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHHHHH
Q 024230          101 IFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQL  180 (270)
Q Consensus       101 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal~~~  180 (270)
                      ++|||++.....              ..|+.++.++    ++.+++.+.++||++||.......+    |..++..    
T Consensus        68 ~vi~~a~~~~~~--------------~~~~~~~~~l----~~aa~~~gv~~iv~~Ss~~~~~~~~----~~~~~~~----  121 (289)
T 3e48_A           68 TVVFIPSIIHPS--------------FKRIPEVENL----VYAAKQSGVAHIIFIGYYADQHNNP----FHMSPYF----  121 (289)
T ss_dssp             EEEECCCCCCSH--------------HHHHHHHHHH----HHHHHHTTCCEEEEEEESCCSTTCC----STTHHHH----
T ss_pred             EEEEeCCCCccc--------------hhhHHHHHHH----HHHHHHcCCCEEEEEcccCCCCCCC----CccchhH----
Confidence            999999864321              1355555555    4444666678999999965433322    3333321    


Q ss_pred             HHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCC----CCChHhHHHHHHHHhCCCCCCccCcEE
Q 024230          181 AKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGR----LGEPKEVSSLVAFLCMPAASYITGQTV  256 (270)
Q Consensus       181 ~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~dva~~~~~l~s~~~~~~~G~~i  256 (270)
                       ..+...+...|++++.+.||++.+++...+   ...........+.+.    +..++|+++++.+++......  |+++
T Consensus       122 -~~~e~~~~~~g~~~~ilrp~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~--g~~~  195 (289)
T 3e48_A          122 -GYASRLLSTSGIDYTYVRMAMYMDPLKPYL---PELMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNPDTW--GKRY  195 (289)
T ss_dssp             -HHHHHHHHHHCCEEEEEEECEESTTHHHHH---HHHHHHTEECCCCTTCEEEEECHHHHHHHHHHHHHCGGGT--TCEE
T ss_pred             -HHHHHHHHHcCCCEEEEeccccccccHHHH---HHHHHCCCEecCCCCceeeeEEHHHHHHHHHHHHcCCCcC--CceE
Confidence             122333445689999999999988643111   111111111122222    557999999999999765433  9999


Q ss_pred             eecCCccccc
Q 024230          257 CIDGGFTVNG  266 (270)
Q Consensus       257 ~vdgG~~~~~  266 (270)
                      ++. |..++.
T Consensus       196 ~~~-~~~~s~  204 (289)
T 3e48_A          196 LLS-GYSYDM  204 (289)
T ss_dssp             EEC-CEEEEH
T ss_pred             EeC-CCcCCH
Confidence            999 776654

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.77  E-value=8.6e-18  Score=143.03  Aligned_cols=196  Identities=10%  Similarity=-0.023  Sum_probs=138.3

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      |+|+|||+ |.||++++++|+++|++|++++|+++....+..      ..+.++.+|++|.+            + .++|
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~D~~d~~------------~-~~~d   65 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA------SGAEPLLWPGEEPS------------L-DGVT   65 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH------TTEEEEESSSSCCC------------C-TTCC
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh------CCCeEEEecccccc------------c-CCCC
Confidence            78999998 999999999999999999999999887654322      35888999999832            3 6899


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh--cCCcEEEEecCccccccCC-----------CC
Q 024230          101 IFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRA--SGAASIVLMSSALGIVSAN-----------VG  167 (270)
Q Consensus       101 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~--~~~g~ii~iss~~~~~~~~-----------~~  167 (270)
                      ++||+|+.....     .+                ..+.++..+++  .+..++|++||...+....           ..
T Consensus        66 ~vi~~a~~~~~~-----~~----------------~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~  124 (286)
T 3ius_A           66 HLLISTAPDSGG-----DP----------------VLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPT  124 (286)
T ss_dssp             EEEECCCCBTTB-----CH----------------HHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCC
T ss_pred             EEEECCCccccc-----cH----------------HHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCC
Confidence            999999975432     11                01333444454  4457999999986654322           13


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhh-HHHHhhcCCCCCCCChHhHHHHHHHHhCC
Q 024230          168 TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKF-VDEVKSRTPMGRLGEPKEVSSLVAFLCMP  246 (270)
Q Consensus       168 ~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (270)
                      ..|+.+|.+.+.+++.+      .+++++.+.|+.+..+....+...... ...+........+...+|+++++++++..
T Consensus       125 ~~Y~~sK~~~E~~~~~~------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~  198 (286)
T 3ius_A          125 AARGRWRVMAEQQWQAV------PNLPLHVFRLAGIYGPGRGPFSKLGKGGIRRIIKPGQVFSRIHVEDIAQVLAASMAR  198 (286)
T ss_dssp             SHHHHHHHHHHHHHHHS------TTCCEEEEEECEEEBTTBSSSTTSSSSCCCEEECTTCCBCEEEHHHHHHHHHHHHHS
T ss_pred             CHHHHHHHHHHHHHHhh------cCCCEEEEeccceECCCchHHHHHhcCCccccCCCCcccceEEHHHHHHHHHHHHhC
Confidence            46999999999998876      589999999999987754332111000 00000001122345689999999999976


Q ss_pred             CCCCccCcEEeecCCccccc
Q 024230          247 AASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       247 ~~~~~~G~~i~vdgG~~~~~  266 (270)
                      ..   .|+++++.+|..++.
T Consensus       199 ~~---~g~~~~i~~~~~~s~  215 (286)
T 3ius_A          199 PD---PGAVYNVCDDEPVPP  215 (286)
T ss_dssp             CC---TTCEEEECCSCCBCH
T ss_pred             CC---CCCEEEEeCCCCccH
Confidence            43   789999999877654

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.76  E-value=1.9e-17  Score=142.28  Aligned_cols=195  Identities=14%  Similarity=0.139  Sum_probs=130.7

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh-------hHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTE-------TELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~-------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      +|+|+||||+|+||++++++|+++|++|++++|++       ++.+.+ +.+...  .+.++.+|++|.+++.+++    
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l~~~--~v~~v~~D~~d~~~l~~~~----   74 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELI-DNYQSL--GVILLEGDINDHETLVKAI----   74 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHH-HHHHHT--TCEEEECCTTCHHHHHHHH----
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHH-HHHHhC--CCEEEEeCCCCHHHHHHHH----
Confidence            57899999999999999999999999999999986       443332 333333  4677899999998887777    


Q ss_pred             HHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCccccc------cCC
Q 024230           93 SLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIV------SAN  165 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~~~~------~~~  165 (270)
                          ..+|++||+++...                   +.+..+++++    +++.+ .+++|.  |..+..      ..|
T Consensus        75 ----~~~d~vi~~a~~~~-------------------~~~~~~l~~a----a~~~g~v~~~v~--S~~g~~~~~~~~~~p  125 (307)
T 2gas_A           75 ----KQVDIVICAAGRLL-------------------IEDQVKIIKA----IKEAGNVKKFFP--SEFGLDVDRHDAVEP  125 (307)
T ss_dssp             ----TTCSEEEECSSSSC-------------------GGGHHHHHHH----HHHHCCCSEEEC--SCCSSCTTSCCCCTT
T ss_pred             ----hCCCEEEECCcccc-------------------cccHHHHHHH----HHhcCCceEEee--cccccCcccccCCCc
Confidence                46899999998642                   2233444444    45554 567763  433321      122


Q ss_pred             CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCCh------hhHHHHhhcCCCCCCCChHhHHHH
Q 024230          166 VGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNG------KFVDEVKSRTPMGRLGEPKEVSSL  239 (270)
Q Consensus       166 ~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~dva~~  239 (270)
                      ....| .+|.+++.+.+.       .|++++.+.||++.+++...+....      ..............+.+++|++++
T Consensus       126 ~~~~y-~sK~~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  197 (307)
T 2gas_A          126 VRQVF-EEKASIRRVIEA-------EGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTF  197 (307)
T ss_dssp             HHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHH
T ss_pred             chhHH-HHHHHHHHHHHH-------cCCCeEEEEcceeeccccccccccccccCCCCeEEEecCCCcceEEeeHHHHHHH
Confidence            34578 999999988763       3799999999999887543322110      000000001111234579999999


Q ss_pred             HHHHhCCCCCCccCcEEeecC
Q 024230          240 VAFLCMPAASYITGQTVCIDG  260 (270)
Q Consensus       240 ~~~l~s~~~~~~~G~~i~vdg  260 (270)
                      +..++.+..  ..|+.+.+.|
T Consensus       198 ~~~~l~~~~--~~~~~~~~~~  216 (307)
T 2gas_A          198 TIRAANDPN--TLNKAVHIRL  216 (307)
T ss_dssp             HHHHHTCGG--GTTEEEECCC
T ss_pred             HHHHHcCcc--ccCceEEEeC
Confidence            999997532  3477777765

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.74  E-value=3.4e-17  Score=144.55  Aligned_cols=193  Identities=14%  Similarity=0.128  Sum_probs=142.6

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      ++|+||||+|+||++++++|+++|+ +|+.++|+                         +|++++.++++        ++
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~-------------------------~d~~~l~~~~~--------~~   47 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ-------------------------TKEEELESALL--------KA   47 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT-------------------------CCHHHHHHHHH--------HC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC-------------------------CCHHHHHHHhc--------cC
Confidence            4799999999999999999999999 88887765                         56777777764        48


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc-EEEEecCccccccCCCChhhhhhHHHHH
Q 024230          100 NIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAA-SIVLMSSALGIVSANVGTVYSATKGAMN  178 (270)
Q Consensus       100 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g-~ii~iss~~~~~~~~~~~~y~~sKaal~  178 (270)
                      |++||+|+.....        +.++.+++|+.++.++++++    ++.+.. ++|++||...+.    ...|+.+|.+.+
T Consensus        48 d~Vih~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~v~~Ss~~~~~----~~~Y~~sK~~~E  111 (369)
T 3st7_A           48 DFIVHLAGVNRPE--------HDKEFSLGNVSYLDHVLDIL----TRNTKKPAILLSSSIQATQ----DNPYGESKLQGE  111 (369)
T ss_dssp             SEEEECCCSBCTT--------CSTTCSSSCCBHHHHHHHHH----TTCSSCCEEEEEEEGGGGS----CSHHHHHHHHHH
T ss_pred             CEEEECCcCCCCC--------CHHHHHHHHHHHHHHHHHHH----HHhCCCCeEEEeCchhhcC----CCCchHHHHHHH
Confidence            9999999975432        22345678999999998887    444444 899999987765    567999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEecCcccCCCCccccCC--hhhHHHHhhcCCCC--------CCCChHhHHHHHHHHhCCCC
Q 024230          179 QLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN--GKFVDEVKSRTPMG--------RLGEPKEVSSLVAFLCMPAA  248 (270)
Q Consensus       179 ~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~--~~~~~~~~~~~~~~--------~~~~~~dva~~~~~l~s~~~  248 (270)
                      .+++.++++.   |+++..+.|+.+..+........  ..+...+....+..        .+..++|++++++.++....
T Consensus       112 ~~~~~~~~~~---g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~  188 (369)
T 3st7_A          112 QLLREYAEEY---GNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTP  188 (369)
T ss_dssp             HHHHHHHHHH---CCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHh---CCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhCCc
Confidence            9999998874   68999999999988754332111  12222233222221        23358999999999997543


Q ss_pred             CCccCcEEeecCCccccc
Q 024230          249 SYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       249 ~~~~G~~i~vdgG~~~~~  266 (270)
                      . ..|+++++.+|..++.
T Consensus       189 ~-~~~~~~~i~~~~~~s~  205 (369)
T 3st7_A          189 T-IENGVPTVPNVFKVTL  205 (369)
T ss_dssp             C-EETTEECCSCCEEEEH
T ss_pred             c-cCCceEEeCCCCceeH
Confidence            2 2489999998876553

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.73  E-value=8e-17  Score=140.95  Aligned_cols=206  Identities=12%  Similarity=0.043  Sum_probs=138.6

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh----hHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTE----TELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      +..|+|+||||+|+||+++++.|+++|++|++++|++    ++.+ ..+.+..  ..+.++.+|++|.+++.+++++   
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~~~l~~--~~v~~~~~Dl~d~~~l~~~~~~---   81 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAK-IFKALED--KGAIIVYGLINEQEAMEKILKE---   81 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHH-HHHHHHH--TTCEEEECCTTCHHHHHHHHHH---
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHH-HHHHHHh--CCcEEEEeecCCHHHHHHHHhh---
Confidence            3467999999999999999999999999999999976    3332 2233333  4577889999999998888864   


Q ss_pred             HcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCccccc----cCCCCh
Q 024230           94 LFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIV----SANVGT  168 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~~~~----~~~~~~  168 (270)
                         .++|++||+++.                   .|+.+..++++++    ++.+ ..++|+ |+.....    +.+...
T Consensus        82 ---~~~d~Vi~~a~~-------------------~n~~~~~~l~~aa----~~~g~v~~~v~-S~~g~~~~e~~~~~p~~  134 (346)
T 3i6i_A           82 ---HEIDIVVSTVGG-------------------ESILDQIALVKAM----KAVGTIKRFLP-SEFGHDVNRADPVEPGL  134 (346)
T ss_dssp             ---TTCCEEEECCCG-------------------GGGGGHHHHHHHH----HHHCCCSEEEC-SCCSSCTTTCCCCTTHH
T ss_pred             ---CCCCEEEECCch-------------------hhHHHHHHHHHHH----HHcCCceEEee-cccCCCCCccCcCCCcc
Confidence               379999999986                   2777888887777    4444 456664 4332211    113346


Q ss_pred             hhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCCh------hhHHHHhhcCCCCCCCChHhHHHHHHH
Q 024230          169 VYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNG------KFVDEVKSRTPMGRLGEPKEVSSLVAF  242 (270)
Q Consensus       169 ~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~dva~~~~~  242 (270)
                      .|+.+|.+++.+.+.       .|++++.+.||++...+...+....      ..............+..++|++++++.
T Consensus       135 ~y~~sK~~~e~~l~~-------~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~  207 (346)
T 3i6i_A          135 NMYREKRRVRQLVEE-------SGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMK  207 (346)
T ss_dssp             HHHHHHHHHHHHHHH-------TTCCBEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCCCEEEECHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHH-------cCCCEEEEEecccccccCccccccccccCCCceEEEccCCCceEEecCHHHHHHHHHH
Confidence            799999998888765       5899999999988876543322110      000000011112235579999999999


Q ss_pred             HhCCCCCCccCcEEeecC-Ccccc
Q 024230          243 LCMPAASYITGQTVCIDG-GFTVN  265 (270)
Q Consensus       243 l~s~~~~~~~G~~i~vdg-G~~~~  265 (270)
                      ++...  ...|+.+.+-| |..++
T Consensus       208 ~l~~~--~~~~~~~~i~g~~~~~s  229 (346)
T 3i6i_A          208 TVDDV--RTLNKSVHFRPSCNCLN  229 (346)
T ss_dssp             HTTCG--GGTTEEEECCCGGGEEC
T ss_pred             HHhCc--cccCeEEEEeCCCCCCC
Confidence            99653  23467777764 45443

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.71  E-value=8.5e-17  Score=138.50  Aligned_cols=205  Identities=13%  Similarity=0.093  Sum_probs=133.3

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh-----hHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTE-----TELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .|+|+||||+|+||++++++|+++|++|++++|+.     +..+. .+.+..  ..+.++.+|++|.+++.+++      
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~--~~~~~~~~D~~d~~~l~~~~------   74 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQM-LLYFKQ--LGAKLIEASLDDHQRLVDAL------   74 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHH-HHHHHT--TTCEEECCCSSCHHHHHHHH------
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHH-HHHHHh--CCeEEEeCCCCCHHHHHHHH------
Confidence            46899999999999999999999999999999984     33322 222322  35778899999998888777      


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCcccccc------CCCC
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIVS------ANVG  167 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~~~~~------~~~~  167 (270)
                        ..+|++||+++.....               .|+.+..++++++    ++.+ .++||+ |+......      .+..
T Consensus        75 --~~~d~vi~~a~~~~~~---------------~~~~~~~~l~~aa----~~~g~v~~~v~-S~~g~~~~~~~~~~~p~~  132 (313)
T 1qyd_A           75 --KQVDVVISALAGGVLS---------------HHILEQLKLVEAI----KEAGNIKRFLP-SEFGMDPDIMEHALQPGS  132 (313)
T ss_dssp             --TTCSEEEECCCCSSSS---------------TTTTTHHHHHHHH----HHSCCCSEEEC-SCCSSCTTSCCCCCSSTT
T ss_pred             --hCCCEEEECCccccch---------------hhHHHHHHHHHHH----HhcCCCceEEe-cCCcCCccccccCCCCCc
Confidence              4689999999975321               2555666665555    5555 567874 33221111      1335


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC-------hhhHHHHhhcCCCCCCCChHhHHHHH
Q 024230          168 TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN-------GKFVDEVKSRTPMGRLGEPKEVSSLV  240 (270)
Q Consensus       168 ~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~dva~~~  240 (270)
                      ..| .+|.+++.+.+.       .|++++.+.||++..++...+...       ......+........+..++|+++++
T Consensus       133 ~~y-~sK~~~e~~~~~-------~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~  204 (313)
T 1qyd_A          133 ITF-IDKRKVRRAIEA-------ASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYT  204 (313)
T ss_dssp             HHH-HHHHHHHHHHHH-------TTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHH
T ss_pred             chH-HHHHHHHHHHHh-------cCCCeEEEEeceeccccccccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHH
Confidence            678 999999887753       479999999998865432221110       00000000001112345789999999


Q ss_pred             HHHhCCCCCCccCcEEeecC-Ccccc
Q 024230          241 AFLCMPAASYITGQTVCIDG-GFTVN  265 (270)
Q Consensus       241 ~~l~s~~~~~~~G~~i~vdg-G~~~~  265 (270)
                      ..++.+..  ..|+.+.+.| |..++
T Consensus       205 ~~~l~~~~--~~~~~~~~~g~~~~~s  228 (313)
T 1qyd_A          205 IKSIDDPQ--TLNKTMYIRPPMNILS  228 (313)
T ss_dssp             HHHTTCGG--GSSSEEECCCGGGEEE
T ss_pred             HHHHhCcc--cCCceEEEeCCCCccC
Confidence            99996532  3477777765 34433

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.71  E-value=1.5e-17  Score=143.92  Aligned_cols=201  Identities=11%  Similarity=0.111  Sum_probs=129.4

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh-----hHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTE-----TELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .|+|+||||+|+||++++++|+++|++|++++|+.     ....+....+..  ..+.++.+|++|.+++.+++      
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~--~~v~~v~~D~~d~~~l~~a~------   75 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRS--MGVTIIEGEMEEHEKMVSVL------   75 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHH--TTCEEEECCTTCHHHHHHHH------
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhc--CCcEEEEecCCCHHHHHHHH------
Confidence            46899999999999999999999999999999986     122222223333  34778899999999888777      


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCcccccc---C---CCC
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIVS---A---NVG  167 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~~~~~---~---~~~  167 (270)
                        ..+|++||+++...                   +.+..+    +++.+.+.+ .++||  .|..+...   .   +..
T Consensus        76 --~~~d~vi~~a~~~~-------------------~~~~~~----l~~aa~~~g~v~~~v--~S~~g~~~~~~~~~~p~~  128 (321)
T 3c1o_A           76 --KQVDIVISALPFPM-------------------ISSQIH----IINAIKAAGNIKRFL--PSDFGCEEDRIKPLPPFE  128 (321)
T ss_dssp             --TTCSEEEECCCGGG-------------------SGGGHH----HHHHHHHHCCCCEEE--CSCCSSCGGGCCCCHHHH
T ss_pred             --cCCCEEEECCCccc-------------------hhhHHH----HHHHHHHhCCccEEe--ccccccCccccccCCCcc
Confidence              46899999998632                   223333    444445555 56777  24433211   1   223


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC------ChhhHHHHhhcCCCCCCCChHhHHHHHH
Q 024230          168 TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG------NGKFVDEVKSRTPMGRLGEPKEVSSLVA  241 (270)
Q Consensus       168 ~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~dva~~~~  241 (270)
                      ..| .+|.+++.+.+.       .+++++.+.||++..++...+..      .......+........+..++|+++++.
T Consensus       129 ~~y-~sK~~~e~~~~~-------~~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (321)
T 3c1o_A          129 SVL-EKKRIIRRAIEA-------AALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTI  200 (321)
T ss_dssp             HHH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHH
T ss_pred             hHH-HHHHHHHHHHHH-------cCCCeEEEEeceeccccccccccccccccccCceEEecCCCcceeEeeHHHHHHHHH
Confidence            579 999999988863       36888899999876542211100      0000000000111123557999999999


Q ss_pred             HHhCCCCCCccCcEEeecC-Ccccc
Q 024230          242 FLCMPAASYITGQTVCIDG-GFTVN  265 (270)
Q Consensus       242 ~l~s~~~~~~~G~~i~vdg-G~~~~  265 (270)
                      +++.+..  ..|+.+.+.| |..++
T Consensus       201 ~~l~~~~--~~g~~~~~~g~~~~~t  223 (321)
T 3c1o_A          201 KVACDPR--CCNRIVIYRPPKNIIS  223 (321)
T ss_dssp             HHHHCGG--GTTEEEECCCGGGEEE
T ss_pred             HHHhCcc--ccCeEEEEeCCCCccc
Confidence            9997532  3488888876 44443

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.71  E-value=3.5e-16  Score=137.36  Aligned_cols=215  Identities=11%  Similarity=0.051  Sum_probs=143.9

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCC-----CeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLG-----ATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G-----~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      +|+|+||||+|+||++++++|+++|     ++|++++|++....       ....++.++.+|++|.+++.++++.+   
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-------~~~~~~~~~~~Dl~d~~~~~~~~~~~---   70 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-------HEDNPINYVQCDISDPDDSQAKLSPL---   70 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-------CCSSCCEEEECCTTSHHHHHHHHTTC---
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-------cccCceEEEEeecCCHHHHHHHHhcC---
Confidence            5789999999999999999999999     99999999876432       12346788899999998887776421   


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEE-------EecCccccccC---
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIV-------LMSSALGIVSA---  164 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii-------~iss~~~~~~~---  164 (270)
                        +++|++||+|+...         ++.++.+++|+.++.++++++.+..  .+..++|       ++||...+...   
T Consensus        71 --~~~d~vih~a~~~~---------~~~~~~~~~n~~~~~~l~~a~~~~~--~~~~~~v~~~g~~i~~Ss~~vyg~~~~~  137 (364)
T 2v6g_A           71 --TDVTHVFYVTWANR---------STEQENCEANSKMFRNVLDAVIPNC--PNLKHISLQTGRKHYMGPFESYGKIESH  137 (364)
T ss_dssp             --TTCCEEEECCCCCC---------SSHHHHHHHHHHHHHHHHHHHTTTC--TTCCEEEEECCTHHHHCCGGGTTTSCCC
T ss_pred             --CCCCEEEECCCCCc---------chHHHHHHHhHHHHHHHHHHHHHhc--cccceEEeccCceEEEechhhccccccC
Confidence              24999999999752         1356788999999999999985431  1344676       67777544221   


Q ss_pred             -----------CCChhhhhhHHHHHHHHHHHHHHHccCC-ceEEEEecCcccCCCCccccCC--hh-hHHHH--hhcCCC
Q 024230          165 -----------NVGTVYSATKGAMNQLAKNLACEWAKDN-IRTNSVAPWYIRTPFTEPLLGN--GK-FVDEV--KSRTPM  227 (270)
Q Consensus       165 -----------~~~~~y~~sKaal~~~~~sla~el~~~~-i~v~~v~pG~v~t~~~~~~~~~--~~-~~~~~--~~~~~~  227 (270)
                                 +....|    .+.+.+++.++.   ..+ +++..+.|+.+..+........  .. ....+  ....+.
T Consensus       138 ~~~~~E~~~~~~~~~~y----~~~E~~~~~~~~---~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~  210 (364)
T 2v6g_A          138 DPPYTEDLPRLKYMNFY----YDLEDIMLEEVE---KKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVL  210 (364)
T ss_dssp             CSSBCTTSCCCSSCCHH----HHHHHHHHHHHT---TSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCB
T ss_pred             CCCCCccccCCccchhh----HHHHHHHHHHhh---cCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCce
Confidence                       112245    234444444332   245 9999999999988755432110  01 12222  122211


Q ss_pred             C------------CCCChHhHHHHHHHHhCCCCCCccCcEEeecCCccccc
Q 024230          228 G------------RLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       228 ~------------~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                      .            ...+.+|++++++.++...  ...|+++++.+|..++.
T Consensus       211 ~~~g~~~~~~~~~~~~~v~Dva~a~~~~~~~~--~~~g~~~ni~~~~~~s~  259 (364)
T 2v6g_A          211 RFTGCKAAWDGYSDCSDADLIAEHHIWAAVDP--YAKNEAFNVSNGDVFKW  259 (364)
T ss_dssp             CCCSCHHHHHSCBCCEEHHHHHHHHHHHHHCG--GGTTEEEEECCSCCBCH
T ss_pred             ecCCCcccccccCCCCcHHHHHHHHHHHHhCC--CCCCceEEecCCCcCCH
Confidence            1            1223588999999988542  24789999998865543

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.68  E-value=5.5e-16  Score=142.82  Aligned_cols=206  Identities=12%  Similarity=0.077  Sum_probs=139.1

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      +|+||||||+|.||+++++.|+++|++|++++|+.+..+              .+.+|+.+..         .+.+ .++
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~--------------~v~~d~~~~~---------~~~l-~~~  202 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPG--------------KRFWDPLNPA---------SDLL-DGA  202 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTT--------------CEECCTTSCC---------TTTT-TTC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcc--------------ceeecccchh---------HHhc-CCC
Confidence            689999999999999999999999999999999876521              1567776421         2223 579


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccc-cC----------CCCh
Q 024230          100 NIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIV-SA----------NVGT  168 (270)
Q Consensus       100 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~-~~----------~~~~  168 (270)
                      |++||+|+.....   ..+.+..++.+++|+.++.++++++.   .+.+..++|++||...+. ..          ....
T Consensus       203 D~Vih~A~~~~~~---~~~~~~~~~~~~~Nv~gt~~ll~a~a---~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~  276 (516)
T 3oh8_A          203 DVLVHLAGEPIFG---RFNDSHKEAIRESRVLPTKFLAELVA---ESTQCTTMISASAVGFYGHDRGDEILTEESESGDD  276 (516)
T ss_dssp             SEEEECCCC--------CCGGGHHHHHHHTHHHHHHHHHHHH---HCSSCCEEEEEEEGGGGCSEEEEEEECTTSCCCSS
T ss_pred             CEEEECCCCcccc---ccchhHHHHHHHHHHHHHHHHHHHHH---hcCCCCEEEEeCcceEecCCCCCCccCCCCCCCcC
Confidence            9999999975432   34455677889999999999999753   344557899999987654 11          1234


Q ss_pred             hhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhc--CCC------CCCCChHhHHHHH
Q 024230          169 VYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSR--TPM------GRLGEPKEVSSLV  240 (270)
Q Consensus       169 ~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~--~~~------~~~~~~~dva~~~  240 (270)
                      .|+.+|...+.+.+.    +...|++++.+.||.+..+....+   ......+...  ...      ..+..++|+++++
T Consensus       277 ~y~~~~~~~E~~~~~----~~~~gi~~~ilRp~~v~Gp~~~~~---~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai  349 (516)
T 3oh8_A          277 FLAEVCRDWEHATAP----ASDAGKRVAFIRTGVALSGRGGML---PLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIY  349 (516)
T ss_dssp             HHHHHHHHHHHTTHH----HHHTTCEEEEEEECEEEBTTBSHH---HHHHHTTC---CCCCTTSCCEECEEEHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHH----HHhCCCCEEEEEeeEEECCCCChH---HHHHHHHHhCCCcccCCCCceEceEeHHHHHHHH
Confidence            578888777766443    345689999999999988642100   1111111110  011      1234689999999


Q ss_pred             HHHhCCCCCCccCcEEeecCCcccc
Q 024230          241 AFLCMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       241 ~~l~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                      ++++....  ..| .+++-+|..++
T Consensus       350 ~~~l~~~~--~~g-~~ni~~~~~~s  371 (516)
T 3oh8_A          350 YRAIVDAQ--ISG-PINAVAPNPVS  371 (516)
T ss_dssp             HHHHHCTT--CCE-EEEESCSCCEE
T ss_pred             HHHHhCcc--cCC-cEEEECCCCCC
Confidence            99996532  334 67777776544

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.67  E-value=5.6e-17  Score=140.18  Aligned_cols=201  Identities=12%  Similarity=0.140  Sum_probs=127.3

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      .|+|+||||+|+||++++++|+++|++|++++|+++......+++...  .+.++.+|++|.+++.+++        ..+
T Consensus        11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~--~v~~v~~Dl~d~~~l~~a~--------~~~   80 (318)
T 2r6j_A           11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSL--GAIIVKGELDEHEKLVELM--------KKV   80 (318)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHT--TCEEEECCTTCHHHHHHHH--------TTC
T ss_pred             CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcC--CCEEEEecCCCHHHHHHHH--------cCC
Confidence            368999999999999999999999999999999875222222333333  4677899999999888777        468


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCcccccc------CCCChhhhh
Q 024230          100 NIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIVS------ANVGTVYSA  172 (270)
Q Consensus       100 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~~~~~------~~~~~~y~~  172 (270)
                      |++||+++...                   +.+..++    ++.+++.+ .++||+ | ..+...      .|....| .
T Consensus        81 d~vi~~a~~~~-------------------~~~~~~l----~~aa~~~g~v~~~v~-S-~~g~~~~~~~~~~p~~~~y-~  134 (318)
T 2r6j_A           81 DVVISALAFPQ-------------------ILDQFKI----LEAIKVAGNIKRFLP-S-DFGVEEDRINALPPFEALI-E  134 (318)
T ss_dssp             SEEEECCCGGG-------------------STTHHHH----HHHHHHHCCCCEEEC-S-CCSSCTTTCCCCHHHHHHH-H
T ss_pred             CEEEECCchhh-------------------hHHHHHH----HHHHHhcCCCCEEEe-e-ccccCcccccCCCCcchhH-H
Confidence            99999998531                   2223334    44445555 567764 3 333111      1123468 9


Q ss_pred             hHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC---hhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCC
Q 024230          173 TKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN---GKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAAS  249 (270)
Q Consensus       173 sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  249 (270)
                      +|.+++.+.+.       .++++..+.||++...+...+...   ......+........+..++|+++++..++.... 
T Consensus       135 sK~~~e~~~~~-------~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~-  206 (318)
T 2r6j_A          135 RKRMIRRAIEE-------ANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPR-  206 (318)
T ss_dssp             HHHHHHHHHHH-------TTCCBEEEECCEEHHHHHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGG-
T ss_pred             HHHHHHHHHHh-------cCCCeEEEEcceehhhhhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCcc-
Confidence            99999888764       478899999987764321111000   0000000000111234578999999999997532 


Q ss_pred             CccCcEEeecC-Ccccc
Q 024230          250 YITGQTVCIDG-GFTVN  265 (270)
Q Consensus       250 ~~~G~~i~vdg-G~~~~  265 (270)
                       ..|+.+.+.| |..++
T Consensus       207 -~~~~~~~~~g~~~~~s  222 (318)
T 2r6j_A          207 -ALNRVVIYRPSTNIIT  222 (318)
T ss_dssp             -GTTEEEECCCGGGEEE
T ss_pred             -ccCeEEEecCCCCccC
Confidence             2367777764 44443

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.65  E-value=1.9e-16  Score=136.06  Aligned_cols=197  Identities=12%  Similarity=0.115  Sum_probs=125.5

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhH-----HHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETE-----LNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .|+|+||||+|+||+++++.|+++|++|++++|+...     ..+..+.+..  ..+.++.+|++|.+++.++++     
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~--~~v~~v~~D~~d~~~l~~~~~-----   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKA--SGANIVHGSIDDHASLVEAVK-----   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHT--TTCEEECCCTTCHHHHHHHHH-----
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHh--CCCEEEEeccCCHHHHHHHHc-----
Confidence            4789999999999999999999999999999997421     1112223332  347788999999998887773     


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCcccccc-----CCCCh
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIVS-----ANVGT  168 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~~~~~-----~~~~~  168 (270)
                         .+|++||+++...                   +.+...+++    .+++.+ .+++|+ |+......     .|...
T Consensus        77 ---~~d~vi~~a~~~~-------------------~~~~~~l~~----aa~~~g~v~~~v~-S~~g~~~~~~~~~~p~~~  129 (308)
T 1qyc_A           77 ---NVDVVISTVGSLQ-------------------IESQVNIIK----AIKEVGTVKRFFP-SEFGNDVDNVHAVEPAKS  129 (308)
T ss_dssp             ---TCSEEEECCCGGG-------------------SGGGHHHHH----HHHHHCCCSEEEC-SCCSSCTTSCCCCTTHHH
T ss_pred             ---CCCEEEECCcchh-------------------hhhHHHHHH----HHHhcCCCceEee-cccccCccccccCCcchh
Confidence               5899999998531                   223334444    445555 567763 43321111     12235


Q ss_pred             hhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC------hhhHHHHhhcCCCCCCCChHhHHHHHHH
Q 024230          169 VYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN------GKFVDEVKSRTPMGRLGEPKEVSSLVAF  242 (270)
Q Consensus       169 ~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~dva~~~~~  242 (270)
                      .| .+|.+++.+.+.       .+++++.+.||++.+++...+...      ...............+..++|+++++..
T Consensus       130 ~y-~sK~~~e~~~~~-------~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (308)
T 1qyc_A          130 VF-EVKAKVRRAIEA-------EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIK  201 (308)
T ss_dssp             HH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHT
T ss_pred             HH-HHHHHHHHHHHh-------cCCCeEEEEeceeccccccccccccccCCCCCceEEecCCCceEEEecHHHHHHHHHH
Confidence            68 999999888764       378889999998765432221110      0000000000111234578999999999


Q ss_pred             HhCCCCCCccCcEEeecC
Q 024230          243 LCMPAASYITGQTVCIDG  260 (270)
Q Consensus       243 l~s~~~~~~~G~~i~vdg  260 (270)
                      ++.+.  ...|+.+.+.|
T Consensus       202 ~l~~~--~~~~~~~~~~g  217 (308)
T 1qyc_A          202 AVDDP--RTLNKTLYLRL  217 (308)
T ss_dssp             TSSCG--GGTTEEEECCC
T ss_pred             HHhCc--cccCeEEEEeC
Confidence            88653  23467777765

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.52  E-value=6.4e-13  Score=113.57  Aligned_cols=206  Identities=17%  Similarity=0.134  Sum_probs=130.4

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      ++||||||+|.||++++++|.++|++|++++|++...            ++   ..|     .   .   ..+.+ ..+|
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~------------~~---~~~-----~---~---~~~~l-~~~d   53 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG------------RI---TWD-----E---L---AASGL-PSCD   53 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT------------EE---EHH-----H---H---HHHCC-CSCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC------------ee---ecc-----h---h---hHhhc-cCCC
Confidence            4699999999999999999999999999999976431            11   111     1   1   11223 6799


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCC-----------CChh
Q 024230          101 IFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSAN-----------VGTV  169 (270)
Q Consensus       101 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~-----------~~~~  169 (270)
                      .+||+|+.....+....+.+..++.++.|+.++.++.+++..  ...+...+|+.||...+....           ....
T Consensus        54 ~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~--~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~  131 (298)
T 4b4o_A           54 AAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITK--APQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDF  131 (298)
T ss_dssp             EEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHH--CSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSH
T ss_pred             EEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHH--hCCCceEEEEEeeeeeecCCCCCcccccCCccccch
Confidence            999999875555555567777788899999999888877632  122234577777776554321           1223


Q ss_pred             hhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcC--------CCCCCCChHhHHHHHH
Q 024230          170 YSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRT--------PMGRLGEPKEVSSLVA  241 (270)
Q Consensus       170 y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~dva~~~~  241 (270)
                      |+..|...+.     +......++++..+.|+.+..+-...+   ...........        ....+...+|+++++.
T Consensus       132 ~~~~~~~~e~-----~~~~~~~~~~~~~~r~~~v~g~~~~~~---~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~  203 (298)
T 4b4o_A          132 FSNLVTKWEA-----AARLPGDSTRQVVVRSGVVLGRGGGAM---GHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILT  203 (298)
T ss_dssp             HHHHHHHHHH-----HHCCSSSSSEEEEEEECEEECTTSHHH---HHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHH
T ss_pred             hHHHHHHHHH-----HHHhhccCCceeeeeeeeEEcCCCCch---hHHHHHHhcCCcceecccCceeecCcHHHHHHHHH
Confidence            4444433332     123346789999999999987632111   11111111111        1122345899999999


Q ss_pred             HHhCCCCCCccCcEEeecCCccccc
Q 024230          242 FLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       242 ~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                      +++...  ...| ++++.++..++.
T Consensus       204 ~~~~~~--~~~g-~yn~~~~~~~t~  225 (298)
T 4b4o_A          204 HALEAN--HVHG-VLNGVAPSSATN  225 (298)
T ss_dssp             HHHHCT--TCCE-EEEESCSCCCBH
T ss_pred             HHHhCC--CCCC-eEEEECCCccCH
Confidence            988543  2344 888888776553

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.39  E-value=3e-14  Score=121.59  Aligned_cols=86  Identities=19%  Similarity=0.261  Sum_probs=72.7

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      ..+++||+++||||+||+|+++++.|+++|++|++++|+.++.+++.+++... ..+.++.+|+++++++++++      
T Consensus       114 ~~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~-~~~~~~~~D~~~~~~~~~~~------  186 (287)
T 1lu9_A          114 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR-FKVNVTAAETADDASRAEAV------  186 (287)
T ss_dssp             TSCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-HTCCCEEEECCSHHHHHHHT------
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEecCCCHHHHHHHH------
Confidence            46789999999999999999999999999999999999998888877777542 13556789999998877666      


Q ss_pred             cCCcccEEEECCCCC
Q 024230           95 FNGKLNIFVNNVGTS  109 (270)
Q Consensus        95 ~~~~id~li~~ag~~  109 (270)
                        ..+|++|||+|..
T Consensus       187 --~~~DvlVn~ag~g  199 (287)
T 1lu9_A          187 --KGAHFVFTAGAIG  199 (287)
T ss_dssp             --TTCSEEEECCCTT
T ss_pred             --HhCCEEEECCCcc
Confidence              4589999999864

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.20  E-value=4.5e-11  Score=103.73  Aligned_cols=150  Identities=8%  Similarity=0.045  Sum_probs=100.9

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCC-------eEEEeeCCh--hHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGA-------TVHTCSRTE--TELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTV   91 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~-------~v~l~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i   91 (270)
                      ++|+||||+|.||.+++..|+++|+       +|+++++.+  +..+.....+......+  . .|+.+.+++.+.+   
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~--~-~di~~~~~~~~a~---   78 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPL--L-AGLEATDDPKVAF---   78 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTT--E-EEEEEESCHHHHT---
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccc--c-CCeEeccChHHHh---
Confidence            4799999999999999999999996       899999875  22332233343221111  2 4555444444333   


Q ss_pred             HHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccc--------c-
Q 024230           92 SSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGI--------V-  162 (270)
Q Consensus        92 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~--------~-  162 (270)
                           ...|++||+||.....   ..++   .+.++.|+.++..+++++..+-  ....+++++|+....        . 
T Consensus        79 -----~~~D~Vih~Ag~~~~~---~~~~---~~~~~~Nv~~t~~l~~a~~~~~--~~~~~vvv~snp~~~~~~~~~~~~~  145 (327)
T 1y7t_A           79 -----KDADYALLVGAAPRKA---GMER---RDLLQVNGKIFTEQGRALAEVA--KKDVKVLVVGNPANTNALIAYKNAP  145 (327)
T ss_dssp             -----TTCSEEEECCCCCCCT---TCCH---HHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHHHHHTCT
T ss_pred             -----CCCCEEEECCCcCCCC---CCCH---HHHHHHHHHHHHHHHHHHHhhc--CCCeEEEEeCCchhhhHHHHHHHcC
Confidence                 4689999999975421   2333   4578999999999988885431  123477887775421        1 


Q ss_pred             cCCCChhhhhhHHHHHHHHHHHHHHHc
Q 024230          163 SANVGTVYSATKGAMNQLAKNLACEWA  189 (270)
Q Consensus       163 ~~~~~~~y~~sKaal~~~~~sla~el~  189 (270)
                      +.+....|+.+|...+.+.+.++..+.
T Consensus       146 ~~~p~~~yg~tkl~~er~~~~~a~~~g  172 (327)
T 1y7t_A          146 GLNPRNFTAMTRLDHNRAKAQLAKKTG  172 (327)
T ss_dssp             TSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             CCChhheeccchHHHHHHHHHHHHHhC
Confidence            123344699999999999998887753

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.07  E-value=3.8e-10  Score=92.08  Aligned_cols=152  Identities=14%  Similarity=0.130  Sum_probs=92.4

Q ss_pred             CCCCCEEEEecC----------------CCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCC
Q 024230           17 SLQGMTALVTGG----------------TKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSS   80 (270)
Q Consensus        17 ~l~gk~vlItG~----------------s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~   80 (270)
                      +|+||+||||||                +|++|.++|+.|+++|++|++++++.. ++     . ..+  +  ..+|+++
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~-----~-~~g--~--~~~dv~~   73 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP-----T-PPF--V--KRVDVMT   73 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC-----C-CTT--E--EEEECCS
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc-----c-CCC--C--eEEccCc
Confidence            478999999999                699999999999999999999987652 11     0 011  2  2467877


Q ss_pred             HHHHHHHHHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHH--HHHhhHHHHHHHHHHHHHHHhc-CCcEEEEecC
Q 024230           81 RPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLV--MSTNFESAFHLCQLAHPLLRAS-GAASIVLMSS  157 (270)
Q Consensus        81 ~~~~~~~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~--~~~n~~~~~~l~~~~~~~m~~~-~~g~ii~iss  157 (270)
                      .++   +++.+.+.+ +++|++|||||+....++ +.+.+.+.+.  -..++.-.+..+.-+++.+.+. ..+.++ |+ 
T Consensus        74 ~~~---~~~~v~~~~-~~~Dili~~Aav~d~~p~-~~~~~KIkk~~~~~~~l~l~L~~~pdIL~~l~~~~~~~~~~-VG-  146 (226)
T 1u7z_A           74 ALE---MEAAVNASV-QQQNIFIGCAAVADYRAA-TVAPEKIKKQATQGDELTIKMVKNPDIVAGVAALKDHRPYV-VG-  146 (226)
T ss_dssp             HHH---HHHHHHHHG-GGCSEEEECCBCCSEEES-SCCSSCC-------CEEEEEEEECCCHHHHHHHCSSSCCEE-EE-
T ss_pred             HHH---HHHHHHHhc-CCCCEEEECCcccCCCCc-cCChHHhccccccCCceEEEEeecHHHHHHHHhhhcCCcEE-EE-
Confidence            555   556666777 789999999998755444 2233333331  1223222333333344455443 223332 21 


Q ss_pred             ccccccCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecC
Q 024230          158 ALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPW  201 (270)
Q Consensus       158 ~~~~~~~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG  201 (270)
                               +..+.      +.+.+....+|.++|+.+....+.
T Consensus       147 ---------FaaEt------~~l~e~A~~kL~~k~~d~ivaN~~  175 (226)
T 1u7z_A          147 ---------FAAET------NNVEEYARQKRIRKNLDLICANDV  175 (226)
T ss_dssp             ---------EEEES------SSHHHHHHHHHHHHTCSEEEEEEC
T ss_pred             ---------cchhh------chHHHHHHHHHHhcCCCEEEEeec
Confidence                     11111      336667777888888777766654

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.98  E-value=3.6e-09  Score=77.13  Aligned_cols=74  Identities=12%  Similarity=0.134  Sum_probs=61.5

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCC-CeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLG-ATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G-~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      .+++++|+|+ |++|..+++.|.++| ++|++++|++++.+...    .  ..+..+.+|+++.+++.+++        .
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~--~~~~~~~~d~~~~~~~~~~~--------~   68 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----R--MGVATKQVDAKDEAGLAKAL--------G   68 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----T--TTCEEEECCTTCHHHHHHHT--------T
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----h--CCCcEEEecCCCHHHHHHHH--------c
Confidence            4579999999 999999999999999 89999999988766543    2  23556789999987776665        5


Q ss_pred             cccEEEECCC
Q 024230           98 KLNIFVNNVG  107 (270)
Q Consensus        98 ~id~li~~ag  107 (270)
                      .+|++|++++
T Consensus        69 ~~d~vi~~~~   78 (118)
T 3ic5_A           69 GFDAVISAAP   78 (118)
T ss_dssp             TCSEEEECSC
T ss_pred             CCCEEEECCC
Confidence            7899999996

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.93  E-value=3.1e-10  Score=92.80  Aligned_cols=91  Identities=18%  Similarity=0.254  Sum_probs=64.5

Q ss_pred             CCCEEEEecC----------------CCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHH
Q 024230           19 QGMTALVTGG----------------TKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRP   82 (270)
Q Consensus        19 ~gk~vlItG~----------------s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   82 (270)
                      +||+||||||                +|++|.++|+.|+++|++|++++|......       .....+.  ..|+.   
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~-------~~~~~~~--~~~v~---   69 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP-------EPHPNLS--IREIT---   69 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC-------CCCTTEE--EEECC---
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-------cCCCCeE--EEEHh---
Confidence            5899999999                788999999999999999999998753210       0011222  23444   


Q ss_pred             HHHHHHHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHH
Q 024230           83 QRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDF  122 (270)
Q Consensus        83 ~~~~~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~  122 (270)
                      +++++++.+.+.+ +++|++|+||++....+....+.+++
T Consensus        70 s~~em~~~v~~~~-~~~Dili~aAAvsD~~p~~~~~~e~~  108 (232)
T 2gk4_A           70 NTKDLLIEMQERV-QDYQVLIHSMAVSDYTPVYMTGLEEV  108 (232)
T ss_dssp             SHHHHHHHHHHHG-GGCSEEEECSBCCSEEEEEEEEHHHH
T ss_pred             HHHHHHHHHHHhc-CCCCEEEEcCccccccchhhcchhhh
Confidence            4455666666777 78999999999876666554444444

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.82  E-value=3.3e-09  Score=82.07  Aligned_cols=77  Identities=10%  Similarity=0.070  Sum_probs=65.0

Q ss_pred             CcHHHHHHHHHHHCCCeEEEeeCChhHHH---HHHHHHHhcCCeEEEEEccCCCH--HHHHHHHHHHHHHcCCcccEEEE
Q 024230           30 KGLGLAVVEELSMLGATVHTCSRTETELN---ECIHHLQMKGLKVTGSVCDVSSR--PQRQTLINTVSSLFNGKLNIFVN  104 (270)
Q Consensus        30 ~giG~~la~~l~~~G~~v~l~~r~~~~~~---~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~i~~~~~~~id~li~  104 (270)
                      +-++.++++.|+++|++|++..|+++...   +..+.+.+.|.++..+.+|++++  ++++++++.+.+.+ |+ |+|||
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~-G~-dVLVn  103 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHK-GK-DVLVH  103 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTT-TS-CEEEE
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcC-CC-CEEEE
Confidence            34789999999999999999988765432   24556667788899999999999  99999999999888 67 99999


Q ss_pred             CCCC
Q 024230          105 NVGT  108 (270)
Q Consensus       105 ~ag~  108 (270)
                      |+|.
T Consensus       104 nAgg  107 (157)
T 3gxh_A          104 CLAN  107 (157)
T ss_dssp             CSBS
T ss_pred             CCCC
Confidence            9996

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.74  E-value=7.9e-08  Score=85.66  Aligned_cols=81  Identities=26%  Similarity=0.307  Sum_probs=70.0

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCC---CeEEEeeCChhHHHHHHHHHHhcC-CeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLG---ATVHTCSRTETELNECIHHLQMKG-LKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G---~~v~l~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      ++|+|+|+ |+||+.+++.|+++|   .+|++++|+.++++++.+++...+ .++..+.+|+++.+++++++++.     
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~-----   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV-----   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH-----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh-----
Confidence            58999999 899999999999999   389999999999988888876532 45788899999999999888753     


Q ss_pred             CcccEEEECCCC
Q 024230           97 GKLNIFVNNVGT  108 (270)
Q Consensus        97 ~~id~li~~ag~  108 (270)
                       ++|++|||++.
T Consensus        76 -~~DvVin~ag~   86 (405)
T 4ina_A           76 -KPQIVLNIALP   86 (405)
T ss_dssp             -CCSEEEECSCG
T ss_pred             -CCCEEEECCCc
Confidence             68999999984

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.69  E-value=1.2e-11  Score=111.22  Aligned_cols=47  Identities=19%  Similarity=0.167  Sum_probs=41.2

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECI   61 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~   61 (270)
                      ..++|.||+++|||++ +||+++|+.|+..|++|+++++++...++..
T Consensus       259 tg~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa  305 (488)
T 3ond_A          259 TDVMIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQAT  305 (488)
T ss_dssp             HCCCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             cCCcccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            3467999999999987 9999999999999999999999987765443

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.67  E-value=5.4e-08  Score=87.83  Aligned_cols=78  Identities=14%  Similarity=0.132  Sum_probs=62.9

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      ++|+|+|+| +|++|+++++.|++.|++|++++|+.++.+++.+.+    ..+..+.+|+++.+++.+++        ..
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~----~~~~~~~~Dv~d~~~l~~~l--------~~   68 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV----QHSTPISLDVNDDAALDAEV--------AK   68 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTC----TTEEEEECCTTCHHHHHHHH--------TT
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhc----CCceEEEeecCCHHHHHHHH--------cC
Confidence            578999997 899999999999999999999999987765543322    23667889999988877766        47


Q ss_pred             ccEEEECCCCC
Q 024230           99 LNIFVNNVGTS  109 (270)
Q Consensus        99 id~li~~ag~~  109 (270)
                      +|++|||++..
T Consensus        69 ~DvVIn~a~~~   79 (450)
T 1ff9_A           69 HDLVISLIPYT   79 (450)
T ss_dssp             SSEEEECCC--
T ss_pred             CcEEEECCccc
Confidence            99999999864

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.66  E-value=3.7e-08  Score=86.71  Aligned_cols=108  Identities=13%  Similarity=0.121  Sum_probs=74.3

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      ..+++++|+|+|+ |+||+.+++.+...|++|++++|++++++.+.+.+   +..   +.+|.++.+++.+.+       
T Consensus       162 ~~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~---g~~---~~~~~~~~~~l~~~~-------  227 (369)
T 2eez_A          162 PGVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF---GGR---VITLTATEANIKKSV-------  227 (369)
T ss_dssp             TBBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TTS---EEEEECCHHHHHHHH-------
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc---Cce---EEEecCCHHHHHHHH-------
Confidence            3689999999999 99999999999999999999999988776544322   333   345777777766555       


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcc
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSAL  159 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~  159 (270)
                       ...|++|+|++......                   +..+.+..++.|+  .++.||++++..
T Consensus       228 -~~~DvVi~~~g~~~~~~-------------------~~li~~~~l~~mk--~gg~iV~v~~~~  269 (369)
T 2eez_A          228 -QHADLLIGAVLVPGAKA-------------------PKLVTRDMLSLMK--EGAVIVDVAVDQ  269 (369)
T ss_dssp             -HHCSEEEECCC--------------------------CCSCHHHHTTSC--TTCEEEECC---
T ss_pred             -hCCCEEEECCCCCcccc-------------------chhHHHHHHHhhc--CCCEEEEEecCC
Confidence             35799999998643110                   1223445566664  357899998764

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.64  E-value=8.5e-08  Score=76.68  Aligned_cols=78  Identities=22%  Similarity=0.351  Sum_probs=57.3

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC-C
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN-G   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~-~   97 (270)
                      +|++|+|||++||||..+++.+...|++|++++|+++..+..    ++.+...   .+|.++.+..+.+.+    ... +
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~----~~~g~~~---~~d~~~~~~~~~~~~----~~~~~  106 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML----SRLGVEY---VGDSRSVDFADEILE----LTDGY  106 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH----HTTCCSE---EEETTCSTHHHHHHH----HTTTC
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHcCCCE---EeeCCcHHHHHHHHH----HhCCC
Confidence            689999999999999999999999999999999988765443    2334332   247666544333332    221 3


Q ss_pred             cccEEEECCC
Q 024230           98 KLNIFVNNVG  107 (270)
Q Consensus        98 ~id~li~~ag  107 (270)
                      .+|++|+|+|
T Consensus       107 ~~D~vi~~~g  116 (198)
T 1pqw_A          107 GVDVVLNSLA  116 (198)
T ss_dssp             CEEEEEECCC
T ss_pred             CCeEEEECCc
Confidence            6999999997

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.59  E-value=3.9e-07  Score=78.17  Aligned_cols=85  Identities=18%  Similarity=0.296  Sum_probs=65.7

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCC---hhHHHHHHHHHHhc-CCeEEEEEccCCCHHHHHHHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRT---ETELNECIHHLQMK-GLKVTGSVCDVSSRPQRQTLI   88 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~---~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~   88 (270)
                      ...+++||+++|+|+ ||+|++++..|++.|+ +|.+++|+   .++.+++.+++... +..+.  ..++.+.+++.+.+
T Consensus       148 ~~~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~--~~~~~~~~~l~~~l  224 (315)
T 3tnl_A          148 AGHDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQ--LFDIEDHEQLRKEI  224 (315)
T ss_dssp             TTCCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEE--EEETTCHHHHHHHH
T ss_pred             cCCCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceE--EeccchHHHHHhhh
Confidence            357899999999997 7999999999999998 89999999   88888887777654 32333  34666655554443


Q ss_pred             HHHHHHcCCcccEEEECCCCC
Q 024230           89 NTVSSLFNGKLNIFVNNVGTS  109 (270)
Q Consensus        89 ~~i~~~~~~~id~li~~ag~~  109 (270)
                              ...|++||+....
T Consensus       225 --------~~aDiIINaTp~G  237 (315)
T 3tnl_A          225 --------AESVIFTNATGVG  237 (315)
T ss_dssp             --------HTCSEEEECSSTT
T ss_pred             --------cCCCEEEECccCC
Confidence                    4689999997653

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.57  E-value=2.1e-08  Score=85.21  Aligned_cols=83  Identities=17%  Similarity=0.139  Sum_probs=60.8

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      ..++++|+++|||++ |+|+++++.|+++| +|++++|+.++.+++.+++...+.....+.+|+++.          .+.
T Consensus       123 ~~~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~----------~~~  190 (287)
T 1nvt_A          123 IGRVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL----------DVD  190 (287)
T ss_dssp             HCCCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT----------TCC
T ss_pred             CCCcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeH----------HHh
Confidence            357899999999997 99999999999999 999999999888887776654210000112333331          223


Q ss_pred             cCCcccEEEECCCCCC
Q 024230           95 FNGKLNIFVNNVGTSV  110 (270)
Q Consensus        95 ~~~~id~li~~ag~~~  110 (270)
                      + +++|++|||++...
T Consensus       191 ~-~~~DilVn~ag~~~  205 (287)
T 1nvt_A          191 L-DGVDIIINATPIGM  205 (287)
T ss_dssp             C-TTCCEEEECSCTTC
T ss_pred             h-CCCCEEEECCCCCC
Confidence            3 68999999999754

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.54  E-value=1.5e-08  Score=93.14  Aligned_cols=100  Identities=19%  Similarity=0.230  Sum_probs=66.8

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      .+++||+++|||+ ||+|++++..|+++|++|++++|+.++.+++.+++   +.++.    ++.+   +        +.+
T Consensus       360 ~~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~---~~~~~----~~~d---l--------~~~  420 (523)
T 2o7s_A          360 SPLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAI---GGKAL----SLTD---L--------DNY  420 (523)
T ss_dssp             ------CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHT---TC-CE----ETTT---T--------TTC
T ss_pred             cccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCcee----eHHH---h--------hhc
Confidence            3678999999999 59999999999999999999999998887776655   22222    2212   1        111


Q ss_pred             -CCcccEEEECCCCCCC-----CCCCCCCHHHHHHHHHHhhHHHH
Q 024230           96 -NGKLNIFVNNVGTSVL-----KPTLEYNAEDFSLVMSTNFESAF  134 (270)
Q Consensus        96 -~~~id~li~~ag~~~~-----~~~~~~~~~~~~~~~~~n~~~~~  134 (270)
                       ...+|++|||+|....     .++.+.+.+++...+++|+.+..
T Consensus       421 ~~~~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~~  465 (523)
T 2o7s_A          421 HPEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRI  465 (523)
T ss_dssp             --CCSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSSS
T ss_pred             cccCceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCcc
Confidence             1458999999997532     35555666777778888887653

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.53  E-value=2.2e-07  Score=80.45  Aligned_cols=79  Identities=15%  Similarity=0.258  Sum_probs=59.7

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      .|++++|||++|+||..+++.+...|++|+++++++++++.. ++   .+...   .+|.++.+++.+.+.++   ..++
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~---~g~~~---~~d~~~~~~~~~~~~~~---~~~~  214 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQ---IGFDA---AFNYKTVNSLEEALKKA---SPDG  214 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HH---TTCSE---EEETTSCSCHHHHHHHH---CTTC
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hh---cCCcE---EEecCCHHHHHHHHHHH---hCCC
Confidence            689999999999999999999999999999999998876554 33   34332   34776644444444433   2257


Q ss_pred             ccEEEECCC
Q 024230           99 LNIFVNNVG  107 (270)
Q Consensus        99 id~li~~ag  107 (270)
                      +|++|+|+|
T Consensus       215 ~d~vi~~~g  223 (333)
T 1v3u_A          215 YDCYFDNVG  223 (333)
T ss_dssp             EEEEEESSC
T ss_pred             CeEEEECCC
Confidence            999999998

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.46  E-value=3.4e-07  Score=82.83  Aligned_cols=81  Identities=12%  Similarity=0.146  Sum_probs=62.4

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHC-CCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSML-GATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~-G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      ..++++|+|+|+|+ |++|+++++.|++. |++|++++|+.++.+++.+.   .  .+..+.+|+.+.+++.+++     
T Consensus        18 ~~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~---~--~~~~~~~D~~d~~~l~~~l-----   86 (467)
T 2axq_A           18 EGRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP---S--GSKAISLDVTDDSALDKVL-----   86 (467)
T ss_dssp             -----CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG---G--TCEEEECCTTCHHHHHHHH-----
T ss_pred             ccCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh---c--CCcEEEEecCCHHHHHHHH-----
Confidence            45788999999997 99999999999998 78999999998887665433   1  2455678999988877665     


Q ss_pred             HcCCcccEEEECCCCC
Q 024230           94 LFNGKLNIFVNNVGTS  109 (270)
Q Consensus        94 ~~~~~id~li~~ag~~  109 (270)
                         .++|++|||++..
T Consensus        87 ---~~~DvVIn~tp~~   99 (467)
T 2axq_A           87 ---ADNDVVISLIPYT   99 (467)
T ss_dssp             ---HTSSEEEECSCGG
T ss_pred             ---cCCCEEEECCchh
Confidence               3689999999864

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.42  E-value=3.1e-07  Score=69.04  Aligned_cols=78  Identities=15%  Similarity=0.242  Sum_probs=57.6

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      ++++++++|+|+ |.+|..+++.|.+.|++|++++++++..+.+    ...+  ...+..|.++.+.+.++      .. 
T Consensus         3 ~~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~----~~~~--~~~~~~d~~~~~~l~~~------~~-   68 (144)
T 2hmt_A            3 RIKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAY----ASYA--THAVIANATEENELLSL------GI-   68 (144)
T ss_dssp             ---CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTT----TTTC--SEEEECCTTCHHHHHTT------TG-
T ss_pred             CCcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHhC--CEEEEeCCCCHHHHHhc------CC-
Confidence            466789999998 9999999999999999999999987765432    2223  24567898886655433      12 


Q ss_pred             CcccEEEECCCC
Q 024230           97 GKLNIFVNNVGT  108 (270)
Q Consensus        97 ~~id~li~~ag~  108 (270)
                      .+.|++|++++.
T Consensus        69 ~~~d~vi~~~~~   80 (144)
T 2hmt_A           69 RNFEYVIVAIGA   80 (144)
T ss_dssp             GGCSEEEECCCS
T ss_pred             CCCCEEEECCCC
Confidence            578999999874

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.40  E-value=2.2e-06  Score=74.17  Aligned_cols=151  Identities=7%  Similarity=0.032  Sum_probs=96.8

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCC-------eEEEeeCC----hhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHH
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGA-------TVHTCSRT----ETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLI   88 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~-------~v~l~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   88 (270)
                      .++|+||||+|.+|.+++..|+.+|.       +|++++++    +++++.....+......+.   .|+....+..+.+
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~---~~i~~~~~~~~al   81 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLL---AGMTAHADPMTAF   81 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTE---EEEEEESSHHHHT
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhccccc---CcEEEecCcHHHh
Confidence            45899999999999999999999985       79999998    5555544445544211111   2333323333333


Q ss_pred             HHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccc--------
Q 024230           89 NTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALG--------  160 (270)
Q Consensus        89 ~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~--------  160 (270)
                              ...|++|++||.....   ..+.   .+.+..|+.....+.+.+..+-  ...+.+|++|....        
T Consensus        82 --------~~aD~Vi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i~~~~--~p~a~ii~~SNPv~~~t~~~~~  145 (329)
T 1b8p_A           82 --------KDADVALLVGARPRGP---GMER---KDLLEANAQIFTVQGKAIDAVA--SRNIKVLVVGNPANTNAYIAMK  145 (329)
T ss_dssp             --------TTCSEEEECCCCCCCT---TCCH---HHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHHHHH
T ss_pred             --------CCCCEEEEeCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHHhc--CCCeEEEEccCchHHHHHHHHH
Confidence                    5789999999975321   2233   3457889888888877774321  12458888876442        


Q ss_pred             cc-cCCCChhhhhhHHHHHHHHHHHHHHHc
Q 024230          161 IV-SANVGTVYSATKGAMNQLAKNLACEWA  189 (270)
Q Consensus       161 ~~-~~~~~~~y~~sKaal~~~~~sla~el~  189 (270)
                      .. +.|..-.|+.++.--..+.+.++..+.
T Consensus       146 ~~~~~p~~~v~g~t~Ld~~r~~~~la~~lg  175 (329)
T 1b8p_A          146 SAPSLPAKNFTAMLRLDHNRALSQIAAKTG  175 (329)
T ss_dssp             TCTTSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             HcCCCCHHHEEEeecHHHHHHHHHHHHHhC
Confidence            11 223333477776656667777777775

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.40  E-value=1.5e-06  Score=65.36  Aligned_cols=76  Identities=14%  Similarity=0.238  Sum_probs=59.2

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      +++++++|+|+ |.+|+.+++.|.++|++|++++++++..+.+.+    .+  +.++..|.++++.++++      .. .
T Consensus         4 ~~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~~--~~~~~gd~~~~~~l~~~------~~-~   69 (141)
T 3llv_A            4 NGRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED----EG--FDAVIADPTDESFYRSL------DL-E   69 (141)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----TT--CEEEECCTTCHHHHHHS------CC-T
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----CC--CcEEECCCCCHHHHHhC------Cc-c
Confidence            34578999998 779999999999999999999999887655432    23  55678999998776544      11 5


Q ss_pred             cccEEEECCC
Q 024230           98 KLNIFVNNVG  107 (270)
Q Consensus        98 ~id~li~~ag  107 (270)
                      +.|.+|.+.+
T Consensus        70 ~~d~vi~~~~   79 (141)
T 3llv_A           70 GVSAVLITGS   79 (141)
T ss_dssp             TCSEEEECCS
T ss_pred             cCCEEEEecC
Confidence            7899998876

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.38  E-value=9.4e-07  Score=74.36  Aligned_cols=79  Identities=16%  Similarity=0.299  Sum_probs=60.0

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      ..++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++...+ .+.  ..|+   +++       .+ 
T Consensus       114 ~~~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~-~~~--~~~~---~~~-------~~-  178 (271)
T 1nyt_A          114 SFIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG-SIQ--ALSM---DEL-------EG-  178 (271)
T ss_dssp             TCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS-SEE--ECCS---GGG-------TT-
T ss_pred             CcCcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccC-Cee--EecH---HHh-------cc-
Confidence            45789999999998 799999999999999999999999998888777664322 221  2332   111       11 


Q ss_pred             cCCcccEEEECCCCCC
Q 024230           95 FNGKLNIFVNNVGTSV  110 (270)
Q Consensus        95 ~~~~id~li~~ag~~~  110 (270)
                        +..|++|||++...
T Consensus       179 --~~~DivVn~t~~~~  192 (271)
T 1nyt_A          179 --HEFDLIINATSSGI  192 (271)
T ss_dssp             --CCCSEEEECCSCGG
T ss_pred             --CCCCEEEECCCCCC
Confidence              47999999999754

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.37  E-value=1.5e-06  Score=75.62  Aligned_cols=80  Identities=18%  Similarity=0.165  Sum_probs=60.1

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      .|++|+|+|++|+||..+++.+...|++|++++|++++.+..    ++.+...   ..|.++.+++.+.+.++..   +.
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~----~~~g~~~---~~d~~~~~~~~~~~~~~~~---~~  238 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELF----RSIGGEV---FIDFTKEKDIVGAVLKATD---GG  238 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHH----HHTTCCE---EEETTTCSCHHHHHHHHHT---SC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHH----HHcCCce---EEecCccHhHHHHHHHHhC---CC
Confidence            689999999999999999999999999999999988776432    2234332   2477755555555544432   37


Q ss_pred             ccEEEECCCC
Q 024230           99 LNIFVNNVGT  108 (270)
Q Consensus        99 id~li~~ag~  108 (270)
                      +|++|+++|.
T Consensus       239 ~D~vi~~~g~  248 (347)
T 2hcy_A          239 AHGVINVSVS  248 (347)
T ss_dssp             EEEEEECSSC
T ss_pred             CCEEEECCCc
Confidence            9999999984

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.35  E-value=1.1e-06  Score=75.75  Aligned_cols=78  Identities=18%  Similarity=0.231  Sum_probs=57.7

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC-C
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN-G   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~-~   97 (270)
                      .|++|+||||+|+||..+++.+...|++|+++++++++++...+ +   +...   .+|.++.+..+++.+    ... .
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~---g~~~---~~~~~~~~~~~~~~~----~~~~~  208 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A---GAWQ---VINYREEDLVERLKE----ITGGK  208 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H---TCSE---EEETTTSCHHHHHHH----HTTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c---CCCE---EEECCCccHHHHHHH----HhCCC
Confidence            58999999999999999999999999999999999877655432 2   3332   246665444333332    221 3


Q ss_pred             cccEEEECCC
Q 024230           98 KLNIFVNNVG  107 (270)
Q Consensus        98 ~id~li~~ag  107 (270)
                      ++|++|+|+|
T Consensus       209 ~~D~vi~~~g  218 (327)
T 1qor_A          209 KVRVVYDSVG  218 (327)
T ss_dssp             CEEEEEECSC
T ss_pred             CceEEEECCc
Confidence            6999999998

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.35  E-value=1.6e-06  Score=75.07  Aligned_cols=80  Identities=20%  Similarity=0.258  Sum_probs=58.2

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      .|++|+|+|++|+||..+++.+...|++|+++++++++++.+.+ +   +...   .+|.++.+..+++.+..   .+.+
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~---g~~~---~~d~~~~~~~~~i~~~~---~~~~  214 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK-L---GCHH---TINYSTQDFAEVVREIT---GGKG  214 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H---TCSE---EEETTTSCHHHHHHHHH---TTCC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---CCCE---EEECCCHHHHHHHHHHh---CCCC
Confidence            68999999999999999999999999999999999877655432 2   4332   24666544433333221   1146


Q ss_pred             ccEEEECCCC
Q 024230           99 LNIFVNNVGT  108 (270)
Q Consensus        99 id~li~~ag~  108 (270)
                      +|++|+|+|.
T Consensus       215 ~d~vi~~~g~  224 (333)
T 1wly_A          215 VDVVYDSIGK  224 (333)
T ss_dssp             EEEEEECSCT
T ss_pred             CeEEEECCcH
Confidence            9999999984

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.33  E-value=1.2e-05  Score=69.34  Aligned_cols=102  Identities=12%  Similarity=0.171  Sum_probs=68.7

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCC--CeEEEeeCChhHHHHHHHHHHhcCC--eEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLG--ATVHTCSRTETELNECIHHLQMKGL--KVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G--~~v~l~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      ++|+||||+|.+|..++..|+++|  .+|++++++++  +....++.....  ++..    +.+..++.+++        
T Consensus         9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~----~~~t~d~~~al--------   74 (326)
T 1smk_A            9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTGAVVRG----FLGQQQLEAAL--------   74 (326)
T ss_dssp             EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSSCEEEE----EESHHHHHHHH--------
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccccceEEE----EeCCCCHHHHc--------
Confidence            589999999999999999999999  78999998876  222333433221  2221    22334444444        


Q ss_pred             CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHH
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHP  142 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  142 (270)
                      ...|++|+++|......   .+.   .+.+..|+.....+.+.+.+
T Consensus        75 ~gaDvVi~~ag~~~~~g---~~r---~dl~~~N~~~~~~i~~~i~~  114 (326)
T 1smk_A           75 TGMDLIIVPAGVPRKPG---MTR---DDLFKINAGIVKTLCEGIAK  114 (326)
T ss_dssp             TTCSEEEECCCCCCCSS---CCC---SHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEcCCcCCCCC---CCH---HHHHHHHHHHHHHHHHHHHh
Confidence            57899999999753221   121   24478898888888777754

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.32  E-value=1.8e-06  Score=73.05  Aligned_cols=83  Identities=13%  Similarity=0.063  Sum_probs=61.9

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      ..++++|+++|+|+ ||+|++++..|++.|+ +|.+++|+.++.+++.+++......+.+...+..+   +.+.+     
T Consensus       122 ~~~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~---l~~~l-----  192 (283)
T 3jyo_A          122 LPNAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARG---IEDVI-----  192 (283)
T ss_dssp             CTTCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTT---HHHHH-----
T ss_pred             CcCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHH---HHHHH-----
Confidence            35789999999998 7999999999999998 69999999999988888876542222222334333   23333     


Q ss_pred             HcCCcccEEEECCCCC
Q 024230           94 LFNGKLNIFVNNVGTS  109 (270)
Q Consensus        94 ~~~~~id~li~~ag~~  109 (270)
                         ...|++||+....
T Consensus       193 ---~~~DiVInaTp~G  205 (283)
T 3jyo_A          193 ---AAADGVVNATPMG  205 (283)
T ss_dssp             ---HHSSEEEECSSTT
T ss_pred             ---hcCCEEEECCCCC
Confidence               3579999998653

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.30  E-value=3.4e-06  Score=73.01  Aligned_cols=80  Identities=15%  Similarity=0.232  Sum_probs=58.7

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      .|++|+|+|++|+||..+++.+...|++|+++++++++.+.+.++   .+....   .|..+.+-    .+.+.+..++.
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~---~g~~~~---~~~~~~~~----~~~~~~~~~~~  218 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEE---LGFDGA---IDYKNEDL----AAGLKRECPKG  218 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT---TCCSEE---EETTTSCH----HHHHHHHCTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---cCCCEE---EECCCHHH----HHHHHHhcCCC
Confidence            589999999999999999999999999999999998877654333   343322   35555332    23333333357


Q ss_pred             ccEEEECCCC
Q 024230           99 LNIFVNNVGT  108 (270)
Q Consensus        99 id~li~~ag~  108 (270)
                      +|++|+|+|.
T Consensus       219 ~d~vi~~~g~  228 (336)
T 4b7c_A          219 IDVFFDNVGG  228 (336)
T ss_dssp             EEEEEESSCH
T ss_pred             ceEEEECCCc
Confidence            9999999983

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.28  E-value=2.9e-06  Score=74.01  Aligned_cols=78  Identities=18%  Similarity=0.261  Sum_probs=57.4

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC-C
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN-G   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~-~   97 (270)
                      .|++|+|+|++|+||..+++.+...|++|+++++++++.+..    ++.+...   .+|..+.+..+    ++.+..+ .
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~----~~~ga~~---~~d~~~~~~~~----~~~~~~~~~  238 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV----LQNGAHE---VFNHREVNYID----KIKKYVGEK  238 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHTTCSE---EEETTSTTHHH----HHHHHHCTT
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH----HHcCCCE---EEeCCCchHHH----HHHHHcCCC
Confidence            589999999999999999999999999999999998876532    2334332   24666543333    3333332 3


Q ss_pred             cccEEEECCC
Q 024230           98 KLNIFVNNVG  107 (270)
Q Consensus        98 ~id~li~~ag  107 (270)
                      ++|++|+|+|
T Consensus       239 ~~D~vi~~~G  248 (351)
T 1yb5_A          239 GIDIIIEMLA  248 (351)
T ss_dssp             CEEEEEESCH
T ss_pred             CcEEEEECCC
Confidence            7999999998

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.28  E-value=1.3e-06  Score=75.90  Aligned_cols=80  Identities=18%  Similarity=0.301  Sum_probs=58.9

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      .|++|+|+|++|+||..+++.+...|++|+++++++++++.+.+   +.|...   .+|.++.+++.+.+.++   .++.
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~---~~g~~~---~~d~~~~~~~~~~~~~~---~~~~  225 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKT---KFGFDD---AFNYKEESDLTAALKRC---FPNG  225 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---TSCCSE---EEETTSCSCSHHHHHHH---CTTC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HcCCce---EEecCCHHHHHHHHHHH---hCCC
Confidence            58999999999999999999999999999999999887655432   234332   23666544444444433   2257


Q ss_pred             ccEEEECCC
Q 024230           99 LNIFVNNVG  107 (270)
Q Consensus        99 id~li~~ag  107 (270)
                      +|++|+|+|
T Consensus       226 ~d~vi~~~g  234 (345)
T 2j3h_A          226 IDIYFENVG  234 (345)
T ss_dssp             EEEEEESSC
T ss_pred             CcEEEECCC
Confidence            999999998

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.28  E-value=2.2e-06  Score=74.83  Aligned_cols=79  Identities=18%  Similarity=0.300  Sum_probs=58.2

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC-C
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN-G   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~-~   97 (270)
                      .|++|+|+||+|+||..+++.+...|++|+++++++++++.+ +++   +...   .+|..+.+..+    ++.+... +
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~---g~~~---~~~~~~~~~~~----~~~~~~~~~  230 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKL---GAAA---GFNYKKEDFSE----ATLKFTKGA  230 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH---TCSE---EEETTTSCHHH----HHHHHTTTS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCcE---EEecCChHHHH----HHHHHhcCC
Confidence            589999999999999999999999999999999998877654 333   4332   24555543333    3333332 3


Q ss_pred             cccEEEECCCC
Q 024230           98 KLNIFVNNVGT  108 (270)
Q Consensus        98 ~id~li~~ag~  108 (270)
                      .+|++|+|+|.
T Consensus       231 ~~d~vi~~~G~  241 (354)
T 2j8z_A          231 GVNLILDCIGG  241 (354)
T ss_dssp             CEEEEEESSCG
T ss_pred             CceEEEECCCc
Confidence            69999999984

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=98.27  E-value=8.5e-06  Score=68.51  Aligned_cols=79  Identities=15%  Similarity=0.227  Sum_probs=59.2

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      ..++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+.+...+ .+..  .|+   +++   .    + 
T Consensus       114 ~~~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~-~~~~--~~~---~~~---~----~-  178 (272)
T 1p77_A          114 NWLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG-NIQA--VSM---DSI---P----L-  178 (272)
T ss_dssp             TCCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS-CEEE--EEG---GGC---C----C-
T ss_pred             CCCcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccC-CeEE--eeH---HHh---c----c-
Confidence            45789999999998 799999999999999999999999998888877765432 2222  232   110   0    0 


Q ss_pred             cCCcccEEEECCCCCC
Q 024230           95 FNGKLNIFVNNVGTSV  110 (270)
Q Consensus        95 ~~~~id~li~~ag~~~  110 (270)
                        +..|++||+++...
T Consensus       179 --~~~DivIn~t~~~~  192 (272)
T 1p77_A          179 --QTYDLVINATSAGL  192 (272)
T ss_dssp             --SCCSEEEECCCC--
T ss_pred             --CCCCEEEECCCCCC
Confidence              37899999998754

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.25  E-value=7.7e-06  Score=70.02  Aligned_cols=84  Identities=14%  Similarity=0.221  Sum_probs=62.5

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCC---hhHHHHHHHHHHhc-CCeEEEEEccCCCHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRT---ETELNECIHHLQMK-GLKVTGSVCDVSSRPQRQTLIN   89 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~---~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~   89 (270)
                      ..+++||+++|+|+ ||.|++++..|++.|+ +|.+++|+   .++.+++.+++... +..+..  .++.+.+.+.+.+ 
T Consensus       143 ~~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~--~~~~~l~~~~~~l-  218 (312)
T 3t4e_A          143 GFDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTV--TDLADQHAFTEAL-  218 (312)
T ss_dssp             TCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEE--EETTCHHHHHHHH-
T ss_pred             CCCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEE--echHhhhhhHhhc-
Confidence            56889999999997 8999999999999998 79999999   77777777777653 333333  3454533222222 


Q ss_pred             HHHHHcCCcccEEEECCCCC
Q 024230           90 TVSSLFNGKLNIFVNNVGTS  109 (270)
Q Consensus        90 ~i~~~~~~~id~li~~ag~~  109 (270)
                             ...|++||+....
T Consensus       219 -------~~~DiIINaTp~G  231 (312)
T 3t4e_A          219 -------ASADILTNGTKVG  231 (312)
T ss_dssp             -------HHCSEEEECSSTT
T ss_pred             -------cCceEEEECCcCC
Confidence                   3579999997664

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.22  E-value=5.6e-06  Score=72.24  Aligned_cols=79  Identities=16%  Similarity=0.218  Sum_probs=57.4

Q ss_pred             CC--CEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           19 QG--MTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        19 ~g--k~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      .|  ++|+|+|++|+||..+++.+...|+ +|+++++++++.+.+.++   .+...   .+|..+.+.    .+.+.+..
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~---~g~~~---~~d~~~~~~----~~~~~~~~  227 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSE---LGFDA---AINYKKDNV----AEQLRESC  227 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT---SCCSE---EEETTTSCH----HHHHHHHC
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH---cCCce---EEecCchHH----HHHHHHhc
Confidence            46  9999999999999999999999999 999999998776554332   34332   246655322    22333333


Q ss_pred             CCcccEEEECCC
Q 024230           96 NGKLNIFVNNVG  107 (270)
Q Consensus        96 ~~~id~li~~ag  107 (270)
                      .+.+|++|+|+|
T Consensus       228 ~~~~d~vi~~~G  239 (357)
T 2zb4_A          228 PAGVDVYFDNVG  239 (357)
T ss_dssp             TTCEEEEEESCC
T ss_pred             CCCCCEEEECCC
Confidence            247999999998

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=98.15  E-value=7e-06  Score=73.87  Aligned_cols=85  Identities=15%  Similarity=0.178  Sum_probs=62.4

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEc--cCC---------CHHHHHHH
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC--DVS---------SRPQRQTL   87 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~--D~~---------~~~~~~~~   87 (270)
                      .|++|+|+|++|+||..++..+...|++|+++++++++++.+    ++.|....+...  |+.         +.++++.+
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~----~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  295 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV----RALGCDLVINRAELGITDDIADDPRRVVETGRKL  295 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HhcCCCEEEecccccccccccccccccchhhhHH
Confidence            689999999999999999999999999999999988876543    334543332221  221         12455566


Q ss_pred             HHHHHHHcCCcccEEEECCC
Q 024230           88 INTVSSLFNGKLNIFVNNVG  107 (270)
Q Consensus        88 ~~~i~~~~~~~id~li~~ag  107 (270)
                      .+++.+..++.+|++|+++|
T Consensus       296 ~~~v~~~~g~g~Dvvid~~G  315 (447)
T 4a0s_A          296 AKLVVEKAGREPDIVFEHTG  315 (447)
T ss_dssp             HHHHHHHHSSCCSEEEECSC
T ss_pred             HHHHHHHhCCCceEEEECCC
Confidence            77777766457999999998

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.12  E-value=1.6e-05  Score=59.17  Aligned_cols=75  Identities=12%  Similarity=0.136  Sum_probs=55.5

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      +++++|+|+ |.+|..+++.|.+.|++|++++++++..+.+.+.   .+  +..+..|.++.+.+.+.      .. .+.
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~---~~--~~~~~~d~~~~~~l~~~------~~-~~~   70 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE---ID--ALVINGDCTKIKTLEDA------GI-EDA   70 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---CS--SEEEESCTTSHHHHHHT------TT-TTC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh---cC--cEEEEcCCCCHHHHHHc------Cc-ccC
Confidence            468999986 9999999999999999999999998776544321   12  34567888877654321      12 578


Q ss_pred             cEEEECCC
Q 024230          100 NIFVNNVG  107 (270)
Q Consensus       100 d~li~~ag  107 (270)
                      |++|.+.+
T Consensus        71 d~vi~~~~   78 (140)
T 1lss_A           71 DMYIAVTG   78 (140)
T ss_dssp             SEEEECCS
T ss_pred             CEEEEeeC
Confidence            99999975

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=98.10  E-value=2.3e-05  Score=66.17  Aligned_cols=77  Identities=19%  Similarity=0.302  Sum_probs=60.1

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      ..++++|+++|+|+ ||+|++++..|++.|+ +|.+++|+.++.+++.+++...+ .+.....+  +      +      
T Consensus       121 ~~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~-~~~~~~~~--~------l------  184 (281)
T 3o8q_A          121 QVLLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG-EVKAQAFE--Q------L------  184 (281)
T ss_dssp             TCCCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS-CEEEEEGG--G------C------
T ss_pred             CCCccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC-CeeEeeHH--H------h------
Confidence            46789999999998 7999999999999996 89999999999888888776543 33333221  1      0      


Q ss_pred             HcCCcccEEEECCCCC
Q 024230           94 LFNGKLNIFVNNVGTS  109 (270)
Q Consensus        94 ~~~~~id~li~~ag~~  109 (270)
                        ....|++||+....
T Consensus       185 --~~~aDiIInaTp~g  198 (281)
T 3o8q_A          185 --KQSYDVIINSTSAS  198 (281)
T ss_dssp             --CSCEEEEEECSCCC
T ss_pred             --cCCCCEEEEcCcCC
Confidence              13689999998764

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.10  E-value=2.3e-05  Score=59.73  Aligned_cols=78  Identities=12%  Similarity=0.060  Sum_probs=58.4

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh-hHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTE-TELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      ..+.++|+|+ |.+|+.+++.|.+.|++|+++++++ +..+.+.... .  ..+.++..|.++++.++++-      . .
T Consensus         2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~-~--~~~~~i~gd~~~~~~l~~a~------i-~   70 (153)
T 1id1_A            2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL-G--DNADVIPGDSNDSSVLKKAG------I-D   70 (153)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH-C--TTCEEEESCTTSHHHHHHHT------T-T
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh-c--CCCeEEEcCCCCHHHHHHcC------h-h
Confidence            4567889985 9999999999999999999999974 5444443322 1  23667889999987765541      1 5


Q ss_pred             cccEEEECCC
Q 024230           98 KLNIFVNNVG  107 (270)
Q Consensus        98 ~id~li~~ag  107 (270)
                      +.|.+|.+.+
T Consensus        71 ~ad~vi~~~~   80 (153)
T 1id1_A           71 RCRAILALSD   80 (153)
T ss_dssp             TCSEEEECSS
T ss_pred             hCCEEEEecC
Confidence            7899998886

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=98.08  E-value=8e-06  Score=69.57  Aligned_cols=79  Identities=16%  Similarity=0.206  Sum_probs=58.0

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .++++|+++|+|+ |++|++++..|++.|+ +|.+++|+.++.+++.+.+......+       .+.++       +.+.
T Consensus       137 ~~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~-------~~~~~-------~~~~  201 (297)
T 2egg_A          137 ITLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAY-------FSLAE-------AETR  201 (297)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCE-------ECHHH-------HHHT
T ss_pred             CCCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCce-------eeHHH-------HHhh
Confidence            5789999999998 7899999999999998 89999999988877766542211111       12222       2222


Q ss_pred             cCCcccEEEECCCCCC
Q 024230           95 FNGKLNIFVNNVGTSV  110 (270)
Q Consensus        95 ~~~~id~li~~ag~~~  110 (270)
                      . ...|++|++++...
T Consensus       202 ~-~~aDivIn~t~~~~  216 (297)
T 2egg_A          202 L-AEYDIIINTTSVGM  216 (297)
T ss_dssp             G-GGCSEEEECSCTTC
T ss_pred             h-ccCCEEEECCCCCC
Confidence            3 57899999998754

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.07  E-value=4.2e-05  Score=66.94  Aligned_cols=79  Identities=15%  Similarity=0.139  Sum_probs=57.8

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      .+++++|+|+|+ |++|+.+++.+...|++|++++|++++++.+.+....   .+..   +..+.+++.+.+        
T Consensus       164 ~l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~---~~~~---~~~~~~~~~~~~--------  228 (361)
T 1pjc_A          164 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS---RVEL---LYSNSAEIETAV--------  228 (361)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG---GSEE---EECCHHHHHHHH--------
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc---eeEe---eeCCHHHHHHHH--------
Confidence            478899999999 9999999999999999999999999887766543321   2211   223344433322        


Q ss_pred             CcccEEEECCCCCC
Q 024230           97 GKLNIFVNNVGTSV  110 (270)
Q Consensus        97 ~~id~li~~ag~~~  110 (270)
                      ...|++|++++...
T Consensus       229 ~~~DvVI~~~~~~~  242 (361)
T 1pjc_A          229 AEADLLIGAVLVPG  242 (361)
T ss_dssp             HTCSEEEECCCCTT
T ss_pred             cCCCEEEECCCcCC
Confidence            36899999998743

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.07  E-value=1.3e-05  Score=69.87  Aligned_cols=79  Identities=20%  Similarity=0.367  Sum_probs=57.6

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      .|++|+|+||+|+||..+++.+...|++|+++++++++++.+.+    .+....   .|..+.+..+.+. ++   .++.
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----lGa~~~---~~~~~~~~~~~~~-~~---~~~g  235 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER----LGAKRG---INYRSEDFAAVIK-AE---TGQG  235 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----HTCSEE---EETTTSCHHHHHH-HH---HSSC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCCCEE---EeCCchHHHHHHH-HH---hCCC
Confidence            68999999999999999999999999999999999888754432    343322   3444433322222 22   2368


Q ss_pred             ccEEEECCCC
Q 024230           99 LNIFVNNVGT  108 (270)
Q Consensus        99 id~li~~ag~  108 (270)
                      +|++|+|+|.
T Consensus       236 ~Dvvid~~g~  245 (353)
T 4dup_A          236 VDIILDMIGA  245 (353)
T ss_dssp             EEEEEESCCG
T ss_pred             ceEEEECCCH
Confidence            9999999984

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.07  E-value=2.6e-05  Score=68.61  Aligned_cols=80  Identities=14%  Similarity=0.108  Sum_probs=59.3

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      ..++|++|+|+|+ |+||+.+++.+...|++|++++|++++++.+.+.+   +..+.   ++..+.+++.+.+       
T Consensus       164 ~~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~---g~~~~---~~~~~~~~l~~~l-------  229 (377)
T 2vhw_A          164 PGVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF---CGRIH---TRYSSAYELEGAV-------  229 (377)
T ss_dssp             TTBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TTSSE---EEECCHHHHHHHH-------
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc---CCeeE---eccCCHHHHHHHH-------
Confidence            3689999999998 99999999999999999999999988776544322   33322   2334455544443       


Q ss_pred             CCcccEEEECCCCCC
Q 024230           96 NGKLNIFVNNVGTSV  110 (270)
Q Consensus        96 ~~~id~li~~ag~~~  110 (270)
                       ...|++|++++...
T Consensus       230 -~~aDvVi~~~~~p~  243 (377)
T 2vhw_A          230 -KRADLVIGAVLVPG  243 (377)
T ss_dssp             -HHCSEEEECCCCTT
T ss_pred             -cCCCEEEECCCcCC
Confidence             35799999988643

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.06  E-value=1.2e-05  Score=69.79  Aligned_cols=79  Identities=18%  Similarity=0.243  Sum_probs=57.2

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHC-CCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC-
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSML-GATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN-   96 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~-G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~-   96 (270)
                      .|++|+|+|++|+||..+++.+... |++|+++++++++++.+ +++   +....   .|..+.+..+    ++.+... 
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~-~~~---g~~~~---~~~~~~~~~~----~~~~~~~~  238 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA-KRA---GADYV---INASMQDPLA----EIRRITES  238 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH-HHH---TCSEE---EETTTSCHHH----HHHHHTTT
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh---CCCEE---ecCCCccHHH----HHHHHhcC
Confidence            6899999999999999999999999 99999999998876544 222   43322   3555533322    2233332 


Q ss_pred             CcccEEEECCCC
Q 024230           97 GKLNIFVNNVGT  108 (270)
Q Consensus        97 ~~id~li~~ag~  108 (270)
                      +++|++|+|+|.
T Consensus       239 ~~~d~vi~~~g~  250 (347)
T 1jvb_A          239 KGVDAVIDLNNS  250 (347)
T ss_dssp             SCEEEEEESCCC
T ss_pred             CCceEEEECCCC
Confidence            479999999984

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=98.03  E-value=1.3e-05  Score=70.21  Aligned_cols=76  Identities=21%  Similarity=0.312  Sum_probs=53.9

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh---hHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTE---TELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      +++|++|+|+|+ |++|..+++.+...|++|+++++++   ++.+. .++   .|...  +  | .+  ++.+.+.+   
T Consensus       178 ~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-~~~---~ga~~--v--~-~~--~~~~~~~~---  242 (366)
T 2cdc_A          178 TLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTV-IEE---TKTNY--Y--N-SS--NGYDKLKD---  242 (366)
T ss_dssp             SSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHH-HHH---HTCEE--E--E-CT--TCSHHHHH---
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHH-HHH---hCCce--e--c-hH--HHHHHHHH---
Confidence            455999999999 9999999999999999999999987   66533 222   34332  2  4 43  22222222   


Q ss_pred             HcCCcccEEEECCCC
Q 024230           94 LFNGKLNIFVNNVGT  108 (270)
Q Consensus        94 ~~~~~id~li~~ag~  108 (270)
                      .. +++|++|+++|.
T Consensus       243 ~~-~~~d~vid~~g~  256 (366)
T 2cdc_A          243 SV-GKFDVIIDATGA  256 (366)
T ss_dssp             HH-CCEEEEEECCCC
T ss_pred             hC-CCCCEEEECCCC
Confidence            12 579999999985

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=98.03  E-value=1.4e-05  Score=69.04  Aligned_cols=79  Identities=22%  Similarity=0.316  Sum_probs=57.2

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC-C
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN-G   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~-~   97 (270)
                      .|++|+|+||+|+||..++..+...|++|+.+++++++++..    ++.|....   .|..+.+    ..+++.+..+ .
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~----~~~ga~~~---~~~~~~~----~~~~~~~~~~~~  216 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA----KEYGAEYL---INASKED----ILRQVLKFTNGK  216 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHTTCSEE---EETTTSC----HHHHHHHHTTTS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHcCCcEE---EeCCCch----HHHHHHHHhCCC
Confidence            689999999999999999999999999999999988876533    23344332   3444433    2233333332 3


Q ss_pred             cccEEEECCCC
Q 024230           98 KLNIFVNNVGT  108 (270)
Q Consensus        98 ~id~li~~ag~  108 (270)
                      .+|++++|+|.
T Consensus       217 g~D~vid~~g~  227 (334)
T 3qwb_A          217 GVDASFDSVGK  227 (334)
T ss_dssp             CEEEEEECCGG
T ss_pred             CceEEEECCCh
Confidence            69999999984

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=98.03  E-value=2.3e-05  Score=67.22  Aligned_cols=145  Identities=10%  Similarity=0.008  Sum_probs=86.2

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCC--eEEEeeC--ChhHHHHHHHHHHhc----CCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGA--TVHTCSR--TETELNECIHHLQMK----GLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~--~v~l~~r--~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      +|+||||+|.+|.+++..|+.+|.  +++++++  +++.++....++...    +..+.+...+    +++.+.+     
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~al-----   72 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLRII-----   72 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGGGG-----
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHHHh-----
Confidence            699999999999999999999885  6899998  665444333333221    1122222111    1111222     


Q ss_pred             HcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccc---------ccC
Q 024230           94 LFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGI---------VSA  164 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~---------~~~  164 (270)
                         ...|++||+||.....   ..+.   .+.+..|+.....+.+++..    .. ..+++++|....         .+.
T Consensus        73 ---~gaD~Vi~~Ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i~~----~~-~~~vlv~SNPv~~~t~~~~k~~~~  138 (313)
T 1hye_A           73 ---DESDVVIITSGVPRKE---GMSR---MDLAKTNAKIVGKYAKKIAE----IC-DTKIFVITNPVDVMTYKALVDSKF  138 (313)
T ss_dssp             ---TTCSEEEECCSCCCCT---TCCH---HHHHHHHHHHHHHHHHHHHH----HC-CCEEEECSSSHHHHHHHHHHHHCC
T ss_pred             ---CCCCEEEECCCCCCCC---CCcH---HHHHHHHHHHHHHHHHHHHH----hC-CeEEEEecCcHHHHHHHHHHhhCc
Confidence               5799999999975321   1233   34588999998888888743    33 345554444321         112


Q ss_pred             CCChhhhh-hHHHHHHHHHHHHHHHc
Q 024230          165 NVGTVYSA-TKGAMNQLAKNLACEWA  189 (270)
Q Consensus       165 ~~~~~y~~-sKaal~~~~~sla~el~  189 (270)
                      |..-.++. +..-...+.+.++..+.
T Consensus       139 p~~rviG~gt~LD~~r~~~~la~~lg  164 (313)
T 1hye_A          139 ERNQVFGLGTHLDSLRFKVAIAKFFG  164 (313)
T ss_dssp             CTTSEEECTTHHHHHHHHHHHHHHHT
T ss_pred             ChhcEEEeCccHHHHHHHHHHHHHhC
Confidence            22233555 44445566666776664

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=98.02  E-value=7.8e-05  Score=63.59  Aligned_cols=114  Identities=11%  Similarity=-0.025  Sum_probs=73.5

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCC--eEEEeeC--ChhHHHHHHHHHHhc---CCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGA--TVHTCSR--TETELNECIHHLQMK---GLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~--~v~l~~r--~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      .+|+||||+|.+|.+++..|+.+|.  +++++++  ++++++....++...   ...+.+.. +  +.    +.+     
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~----~a~-----   68 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GY----EDT-----   68 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CG----GGG-----
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CH----HHh-----
Confidence            3799999999999999999999885  6999999  776654444444332   22222222 2  11    112     


Q ss_pred             HcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcc
Q 024230           94 LFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSAL  159 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~  159 (270)
                         ...|++|++||.....   ..+..   +.+..|+.....+.+.+    .+.....+++++|..
T Consensus        69 ---~~aDvVi~~ag~~~~~---g~~r~---dl~~~N~~i~~~i~~~i----~~~~p~~~viv~SNP  121 (303)
T 1o6z_A           69 ---AGSDVVVITAGIPRQP---GQTRI---DLAGDNAPIMEDIQSSL----DEHNDDYISLTTSNP  121 (303)
T ss_dssp             ---TTCSEEEECCCCCCCT---TCCHH---HHHHHHHHHHHHHHHHH----HTTCSCCEEEECCSS
T ss_pred             ---CCCCEEEEcCCCCCCC---CCCHH---HHHHHHHHHHHHHHHHH----HHHCCCcEEEEeCCh
Confidence               5789999999974321   12333   45788888888887776    444434455555543

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=98.01  E-value=2.4e-05  Score=67.86  Aligned_cols=78  Identities=19%  Similarity=0.269  Sum_probs=57.4

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC-C
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN-G   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~-~   97 (270)
                      .|++|+|+|++|++|..+++.+...|++|+.+++++++.+.+. +   .+...   .+|.++++ +   .+++.+..+ .
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~---~ga~~---~~d~~~~~-~---~~~~~~~~~~~  234 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-A---LGADE---TVNYTHPD-W---PKEVRRLTGGK  234 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-H---HTCSE---EEETTSTT-H---HHHHHHHTTTT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-h---cCCCE---EEcCCccc-H---HHHHHHHhCCC
Confidence            5899999999999999999999999999999999988776543 2   24332   24666543 2   223333332 3


Q ss_pred             cccEEEECCC
Q 024230           98 KLNIFVNNVG  107 (270)
Q Consensus        98 ~id~li~~ag  107 (270)
                      ++|++|+++|
T Consensus       235 ~~d~vi~~~g  244 (343)
T 2eih_A          235 GADKVVDHTG  244 (343)
T ss_dssp             CEEEEEESSC
T ss_pred             CceEEEECCC
Confidence            7999999998

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=98.00  E-value=3.9e-05  Score=66.54  Aligned_cols=78  Identities=21%  Similarity=0.308  Sum_probs=56.2

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC-
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG-   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~-   97 (270)
                      .|++|||+|++|+||..++..+...|++|+++++++++.+.+. +   .+.... +  |..  ++   ..+++.+..++ 
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~---~ga~~v-~--~~~--~~---~~~~v~~~~~~~  226 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVK-S---VGADIV-L--PLE--EG---WAKAVREATGGA  226 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-H---HTCSEE-E--ESS--TT---HHHHHHHHTTTS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-h---cCCcEE-e--cCc--hh---HHHHHHHHhCCC
Confidence            5899999999999999999999999999999999988775433 2   243322 2  332  22   33334444433 


Q ss_pred             cccEEEECCCC
Q 024230           98 KLNIFVNNVGT  108 (270)
Q Consensus        98 ~id~li~~ag~  108 (270)
                      .+|++|+|+|.
T Consensus       227 g~Dvvid~~g~  237 (342)
T 4eye_A          227 GVDMVVDPIGG  237 (342)
T ss_dssp             CEEEEEESCC-
T ss_pred             CceEEEECCch
Confidence            69999999985

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=98.00  E-value=1.5e-05  Score=68.56  Aligned_cols=79  Identities=20%  Similarity=0.196  Sum_probs=57.3

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC-C
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN-G   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~-~   97 (270)
                      .|++|+|+|++|++|..+++.+...|++|+++++++++++.+. +   .|....   .|..+.+.    .+++.+..+ .
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~---~Ga~~~---~~~~~~~~----~~~~~~~~~~~  208 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-A---LGAWET---IDYSHEDV----AKRVLELTDGK  208 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-H---HTCSEE---EETTTSCH----HHHHHHHTTTC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-H---cCCCEE---EeCCCccH----HHHHHHHhCCC
Confidence            5899999999999999999999999999999999988776443 2   343322   34444332    233333332 3


Q ss_pred             cccEEEECCCC
Q 024230           98 KLNIFVNNVGT  108 (270)
Q Consensus        98 ~id~li~~ag~  108 (270)
                      .+|++|+|+|.
T Consensus       209 g~Dvvid~~g~  219 (325)
T 3jyn_A          209 KCPVVYDGVGQ  219 (325)
T ss_dssp             CEEEEEESSCG
T ss_pred             CceEEEECCCh
Confidence            79999999984

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.97  E-value=3.4e-05  Score=64.79  Aligned_cols=78  Identities=15%  Similarity=0.129  Sum_probs=59.0

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      ...+++||+++|+|+ ||+|++++..|++.|+ +|.+++|+.++.+++.+++..  ..+...  +..+.   .       
T Consensus       114 ~~~~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~--~~~~~~--~~~~l---~-------  178 (272)
T 3pwz_A          114 LGEPLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH--SRLRIS--RYEAL---E-------  178 (272)
T ss_dssp             SCCCCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC--TTEEEE--CSGGG---T-------
T ss_pred             cCCCccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc--CCeeEe--eHHHh---c-------
Confidence            356889999999998 7999999999999996 899999999998888877653  223332  22211   0       


Q ss_pred             HHcCCcccEEEECCCCC
Q 024230           93 SLFNGKLNIFVNNVGTS  109 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~  109 (270)
                      .   ...|++||+....
T Consensus       179 ~---~~~DivInaTp~g  192 (272)
T 3pwz_A          179 G---QSFDIVVNATSAS  192 (272)
T ss_dssp             T---CCCSEEEECSSGG
T ss_pred             c---cCCCEEEECCCCC
Confidence            0   3689999997653

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.97  E-value=2.1e-05  Score=68.85  Aligned_cols=76  Identities=14%  Similarity=0.142  Sum_probs=58.3

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      |+=+.++|+|.|+ |.+|+.+++.|++ .++|.+.+++.+.++++.+       .+..+.+|+.|.+++.+++       
T Consensus        12 ~~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~-------~~~~~~~d~~d~~~l~~~~-------   75 (365)
T 3abi_A           12 IEGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKE-------FATPLKVDASNFDKLVEVM-------   75 (365)
T ss_dssp             ----CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTT-------TSEEEECCTTCHHHHHHHH-------
T ss_pred             ccCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhc-------cCCcEEEecCCHHHHHHHH-------
Confidence            3333447999998 9999999999875 5899999999888765422       3456789999999888777       


Q ss_pred             CCcccEEEECCCC
Q 024230           96 NGKLNIFVNNVGT  108 (270)
Q Consensus        96 ~~~id~li~~ag~  108 (270)
                       .+.|++|++++.
T Consensus        76 -~~~DvVi~~~p~   87 (365)
T 3abi_A           76 -KEFELVIGALPG   87 (365)
T ss_dssp             -TTCSEEEECCCG
T ss_pred             -hCCCEEEEecCC
Confidence             578999999874

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.96  E-value=3.9e-05  Score=69.19  Aligned_cols=86  Identities=16%  Similarity=0.200  Sum_probs=63.9

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEcc----------CCCHHHHHHHH
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD----------VSSRPQRQTLI   88 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D----------~~~~~~~~~~~   88 (270)
                      .|++|+|+|++|++|...+..+...|++|+++++++++++.+ +   +.|....+...+          ..+.++++++.
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~-~---~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~  303 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC-R---AMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFG  303 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-H---HHTCCEEEETTTTTCCSEEETTEECHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH-H---hhCCcEEEecCcCcccccccccccchHHHHHHH
Confidence            688999999999999999999999999999999888776543 3   234433222111          23556677777


Q ss_pred             HHHHHHcC-CcccEEEECCCC
Q 024230           89 NTVSSLFN-GKLNIFVNNVGT  108 (270)
Q Consensus        89 ~~i~~~~~-~~id~li~~ag~  108 (270)
                      +++.+..+ ..+|++|.++|.
T Consensus       304 ~~i~~~t~g~g~Dvvid~~G~  324 (456)
T 3krt_A          304 KRIRELTGGEDIDIVFEHPGR  324 (456)
T ss_dssp             HHHHHHHTSCCEEEEEECSCH
T ss_pred             HHHHHHhCCCCCcEEEEcCCc
Confidence            88877664 379999999983

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.94  E-value=1.7e-05  Score=68.66  Aligned_cols=79  Identities=20%  Similarity=0.266  Sum_probs=57.1

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC-C
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN-G   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~-~   97 (270)
                      .|++|+|+|++++||..++..+...|++|+++++++++.+.+.+    .+....   .|..+.+    ..+++.+..+ .
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----lga~~~---~~~~~~~----~~~~~~~~~~~~  212 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR----LGAAYV---IDTSTAP----LYETVMELTNGI  212 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH----HTCSEE---EETTTSC----HHHHHHHHTTTS
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----CCCcEE---EeCCccc----HHHHHHHHhCCC
Confidence            58999999999999999999999999999999999887755432    344332   2444432    2233333332 3


Q ss_pred             cccEEEECCCC
Q 024230           98 KLNIFVNNVGT  108 (270)
Q Consensus        98 ~id~li~~ag~  108 (270)
                      .+|++|+|+|.
T Consensus       213 g~Dvvid~~g~  223 (340)
T 3gms_A          213 GADAAIDSIGG  223 (340)
T ss_dssp             CEEEEEESSCH
T ss_pred             CCcEEEECCCC
Confidence            79999999984

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.91  E-value=3.9e-05  Score=67.08  Aligned_cols=78  Identities=14%  Similarity=0.158  Sum_probs=56.1

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      .|++|+|+||+|++|..+++.+...|++|+.+++++++.+.+.    +.|....   .|..+. ++.+   .+.+..++.
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~----~~Ga~~~---~~~~~~-~~~~---~~~~~~~~g  231 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLK----SLGCDRP---INYKTE-PVGT---VLKQEYPEG  231 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTTCSEE---EETTTS-CHHH---HHHHHCTTC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH----HcCCcEE---EecCCh-hHHH---HHHHhcCCC
Confidence            6899999999999999999999999999999999987765432    3444322   244332 2222   233333357


Q ss_pred             ccEEEECCC
Q 024230           99 LNIFVNNVG  107 (270)
Q Consensus        99 id~li~~ag  107 (270)
                      +|++|+|+|
T Consensus       232 ~D~vid~~g  240 (362)
T 2c0c_A          232 VDVVYESVG  240 (362)
T ss_dssp             EEEEEECSC
T ss_pred             CCEEEECCC
Confidence            999999998

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.86  E-value=5.4e-05  Score=66.28  Aligned_cols=76  Identities=20%  Similarity=0.232  Sum_probs=55.9

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      .|++|+|+|+ |++|..+++.+...|++|+.+++++++.+...+   +.|....   .|..+.+.+       .+.. +.
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~---~lGa~~v---~~~~~~~~~-------~~~~-~~  251 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALK---NFGADSF---LVSRDQEQM-------QAAA-GT  251 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHH---TSCCSEE---EETTCHHHH-------HHTT-TC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---hcCCceE---EeccCHHHH-------HHhh-CC
Confidence            7899999996 999999999999999999999999887655432   3343322   355554332       2222 57


Q ss_pred             ccEEEECCCCC
Q 024230           99 LNIFVNNVGTS  109 (270)
Q Consensus        99 id~li~~ag~~  109 (270)
                      +|++|+++|..
T Consensus       252 ~D~vid~~g~~  262 (366)
T 1yqd_A          252 LDGIIDTVSAV  262 (366)
T ss_dssp             EEEEEECCSSC
T ss_pred             CCEEEECCCcH
Confidence            99999999863

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.85  E-value=2.7e-05  Score=59.49  Aligned_cols=82  Identities=12%  Similarity=0.020  Sum_probs=57.5

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      +.-++.+++|+|+|+ |.+|..+++.|.+.|++|++++|+++..+.+..   ..+  ...+..|.++.+.+.+.      
T Consensus        13 ~~~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~~g--~~~~~~d~~~~~~l~~~------   80 (155)
T 2g1u_A           13 MSKKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---EFS--GFTVVGDAAEFETLKEC------   80 (155)
T ss_dssp             ----CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---TCC--SEEEESCTTSHHHHHTT------
T ss_pred             hhcccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---cCC--CcEEEecCCCHHHHHHc------
Confidence            344778899999996 999999999999999999999999887543210   222  33566788776543321      


Q ss_pred             HcCCcccEEEECCCC
Q 024230           94 LFNGKLNIFVNNVGT  108 (270)
Q Consensus        94 ~~~~~id~li~~ag~  108 (270)
                      .. ...|++|.+.+.
T Consensus        81 ~~-~~ad~Vi~~~~~   94 (155)
T 2g1u_A           81 GM-EKADMVFAFTND   94 (155)
T ss_dssp             TG-GGCSEEEECSSC
T ss_pred             Cc-ccCCEEEEEeCC
Confidence            12 468999999873

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.81  E-value=6.9e-05  Score=65.08  Aligned_cols=79  Identities=13%  Similarity=0.088  Sum_probs=55.4

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      +++++|+||+|++|..++..+...|++|+.+++++++.+.+.    +.|....   .|..+.+ +.+.+.++...  ..+
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~----~~Ga~~~---~~~~~~~-~~~~v~~~~~~--~g~  234 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK----DIGAAHV---LNEKAPD-FEATLREVMKA--EQP  234 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH----HHTCSEE---EETTSTT-HHHHHHHHHHH--HCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HcCCCEE---EECCcHH-HHHHHHHHhcC--CCC
Confidence            389999999999999999999999999999999988865443    2343322   3444432 22222222221  369


Q ss_pred             cEEEECCCC
Q 024230          100 NIFVNNVGT  108 (270)
Q Consensus       100 d~li~~ag~  108 (270)
                      |++++|+|.
T Consensus       235 D~vid~~g~  243 (349)
T 3pi7_A          235 RIFLDAVTG  243 (349)
T ss_dssp             CEEEESSCH
T ss_pred             cEEEECCCC
Confidence            999999984

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.79  E-value=6.1e-05  Score=59.07  Aligned_cols=79  Identities=13%  Similarity=0.134  Sum_probs=58.9

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHC-CCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSML-GATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~-G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .++.+++++|.| .|.+|..+++.|.+. |++|++++++++..+.+    ...+  +..+..|.++++.+.++.     .
T Consensus        35 ~~~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~----~~~g--~~~~~gd~~~~~~l~~~~-----~  102 (183)
T 3c85_A           35 INPGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQH----RSEG--RNVISGDATDPDFWERIL-----D  102 (183)
T ss_dssp             BCCTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHH----HHTT--CCEEECCTTCHHHHHTBC-----S
T ss_pred             cCCCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHH----HHCC--CCEEEcCCCCHHHHHhcc-----C
Confidence            356788899998 599999999999999 99999999998876543    3334  334567988876544320     0


Q ss_pred             cCCcccEEEECCC
Q 024230           95 FNGKLNIFVNNVG  107 (270)
Q Consensus        95 ~~~~id~li~~ag  107 (270)
                      . .+.|.+|.+.+
T Consensus       103 ~-~~ad~vi~~~~  114 (183)
T 3c85_A          103 T-GHVKLVLLAMP  114 (183)
T ss_dssp             C-CCCCEEEECCS
T ss_pred             C-CCCCEEEEeCC
Confidence            1 57899998876

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.77  E-value=4.5e-05  Score=64.99  Aligned_cols=95  Identities=18%  Similarity=0.174  Sum_probs=61.7

Q ss_pred             CCCCCE-EEEecCCC-----------------c-HHHHHHHHHHHCCCeEEEeeCChhHH--------HHHHHHHHh---
Q 024230           17 SLQGMT-ALVTGGTK-----------------G-LGLAVVEELSMLGATVHTCSRTETEL--------NECIHHLQM---   66 (270)
Q Consensus        17 ~l~gk~-vlItG~s~-----------------g-iG~~la~~l~~~G~~v~l~~r~~~~~--------~~~~~~~~~---   66 (270)
                      +++||+ ||||+|.+                 | .|.++|+.|+++||.|+++.+...-.        ..+.+.++.   
T Consensus        33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~  112 (313)
T 1p9o_A           33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGP  112 (313)
T ss_dssp             HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC
T ss_pred             hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhccccc
Confidence            578999 99998875                 5 99999999999999999998743210        001111110   


Q ss_pred             cCCeEEEEEccCCCHHHHHHHHHHH------------------------------HHHcCCcccEEEECCCCCCCC
Q 024230           67 KGLKVTGSVCDVSSRPQRQTLINTV------------------------------SSLFNGKLNIFVNNVGTSVLK  112 (270)
Q Consensus        67 ~~~~~~~~~~D~~~~~~~~~~~~~i------------------------------~~~~~~~id~li~~ag~~~~~  112 (270)
                      ....+..+..|+...+++.+++...                              .+.+ ++.|++|.+|++....
T Consensus       113 ~~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~-~~~di~i~aAAVsDf~  187 (313)
T 1p9o_A          113 ALSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPL-GPSAMFYLAAAVSDFY  187 (313)
T ss_dssp             -CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGG-GGGEEEEECSBCCSEE
T ss_pred             cccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhcc-CCCCEEEECCchhhcc
Confidence            0112334556666656655555432                              1234 5799999999997654

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.76  E-value=0.00011  Score=63.79  Aligned_cols=78  Identities=17%  Similarity=0.214  Sum_probs=56.4

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      .|++|+|+||+|++|..++..+...|++|+.+++++++.+.+.+    .|....   .|..+  +   ..+++.+..++.
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa~~v---i~~~~--~---~~~~~~~~~~~g  217 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK----MGADIV---LNHKE--S---LLNQFKTQGIEL  217 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH----HTCSEE---ECTTS--C---HHHHHHHHTCCC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCCcEE---EECCc--c---HHHHHHHhCCCC
Confidence            68999999999999999999999999999999998887654432    343322   23332  2   233333333357


Q ss_pred             ccEEEECCCC
Q 024230           99 LNIFVNNVGT  108 (270)
Q Consensus        99 id~li~~ag~  108 (270)
                      +|++++|+|.
T Consensus       218 ~Dvv~d~~g~  227 (346)
T 3fbg_A          218 VDYVFCTFNT  227 (346)
T ss_dssp             EEEEEESSCH
T ss_pred             ccEEEECCCc
Confidence            9999999884

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.72  E-value=0.00037  Score=60.35  Aligned_cols=78  Identities=18%  Similarity=0.286  Sum_probs=55.3

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC-
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN-   96 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~-   96 (270)
                      .|++|+|+|+ |++|..+++.+...|+ +|+.+++++++.+... +   .|....   .|..++ +   +.+++.+..+ 
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~---~Ga~~~---~~~~~~-~---~~~~v~~~~~g  234 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-K---VGADYV---INPFEE-D---VVKEVMDITDG  234 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-H---HTCSEE---ECTTTS-C---HHHHHHHHTTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-H---hCCCEE---ECCCCc-C---HHHHHHHHcCC
Confidence            8999999999 9999999999999999 8999999987765432 2   343321   344442 2   2233333332 


Q ss_pred             CcccEEEECCCC
Q 024230           97 GKLNIFVNNVGT  108 (270)
Q Consensus        97 ~~id~li~~ag~  108 (270)
                      ..+|++|+++|.
T Consensus       235 ~g~D~vid~~g~  246 (348)
T 2d8a_A          235 NGVDVFLEFSGA  246 (348)
T ss_dssp             SCEEEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            369999999984

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.71  E-value=1.9e-05  Score=59.60  Aligned_cols=71  Identities=13%  Similarity=0.189  Sum_probs=53.6

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      +++++|.|+ |++|+.+++.|.+.|++|.+++|++++.+++.+++.   ..+.    +..+   +.+++        ...
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~---~~~~----~~~~---~~~~~--------~~~   81 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE---YEYV----LIND---IDSLI--------KNN   81 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT---CEEE----ECSC---HHHHH--------HTC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC---CceE----eecC---HHHHh--------cCC
Confidence            899999996 999999999999999999999999998877666552   2221    2223   22233        357


Q ss_pred             cEEEECCCCC
Q 024230          100 NIFVNNVGTS  109 (270)
Q Consensus       100 d~li~~ag~~  109 (270)
                      |++|++.+..
T Consensus        82 Divi~at~~~   91 (144)
T 3oj0_A           82 DVIITATSSK   91 (144)
T ss_dssp             SEEEECSCCS
T ss_pred             CEEEEeCCCC
Confidence            9999998764

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.69  E-value=0.00021  Score=61.92  Aligned_cols=119  Identities=10%  Similarity=0.108  Sum_probs=72.8

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCC--eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      +++++|.|+|++|.+|..+|..++..|.  +|+++|.++++++....++....    +...++.-..+..+.+       
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~----~~~~~i~~t~d~~~al-------   74 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCG----FEGLNLTFTSDIKEAL-------   74 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHC----CTTCCCEEESCHHHHH-------
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCc----CCCCceEEcCCHHHHh-------
Confidence            4567999999999999999999999994  79999999887776655565421    0001111111222233       


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcE-EEEecCc
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AAS-IVLMSSA  158 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~-ii~iss~  158 (270)
                       ...|++|.++|.... +  ..+.   .+.+..|+.-...+.+.+    .+.. ++. ++++|-.
T Consensus        75 -~dADvVvitaG~p~k-p--G~~R---~dLl~~N~~I~~~i~~~i----~~~~p~a~~vlvvsNP  128 (343)
T 3fi9_A           75 -TDAKYIVSSGGAPRK-E--GMTR---EDLLKGNAEIAAQLGKDI----KSYCPDCKHVIIIFNP  128 (343)
T ss_dssp             -TTEEEEEECCC----------CH---HHHHHHHHHHHHHHHHHH----HHHCTTCCEEEECSSS
T ss_pred             -CCCCEEEEccCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHH----HHhccCcEEEEEecCc
Confidence             578999999997421 1  1222   345677776666665555    4433 353 5666543

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.69  E-value=0.00014  Score=58.79  Aligned_cols=73  Identities=14%  Similarity=0.044  Sum_probs=57.8

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcccE
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNI  101 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~  101 (270)
                      +|+|+|+ |.+|..+++.|.++|+.|++++++++..+.+.+.   .  .+.++..|.++++.++++-      . .+.|.
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~---~--~~~~i~gd~~~~~~l~~a~------i-~~ad~   68 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK---L--KATIIHGDGSHKEILRDAE------V-SKNDV   68 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH---S--SSEEEESCTTSHHHHHHHT------C-CTTCE
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH---c--CCeEEEcCCCCHHHHHhcC------c-ccCCE
Confidence            5899996 9999999999999999999999998877654432   2  3456889999987765441      2 57899


Q ss_pred             EEECCC
Q 024230          102 FVNNVG  107 (270)
Q Consensus       102 li~~ag  107 (270)
                      +|.+.+
T Consensus        69 vi~~~~   74 (218)
T 3l4b_C           69 VVILTP   74 (218)
T ss_dssp             EEECCS
T ss_pred             EEEecC
Confidence            998876

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.68  E-value=0.00012  Score=63.45  Aligned_cols=77  Identities=19%  Similarity=0.315  Sum_probs=53.1

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      .|++|||+||+|++|..++..+...|++|+.+ +++++++.+    ++.|...    +| .+ +++.+.+.+..  .+..
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~----~~lGa~~----i~-~~-~~~~~~~~~~~--~~~g  216 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV----RDLGATP----ID-AS-REPEDYAAEHT--AGQG  216 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH----HHHTSEE----EE-TT-SCHHHHHHHHH--TTSC
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH----HHcCCCE----ec-cC-CCHHHHHHHHh--cCCC
Confidence            58999999999999999999999999999998 777665432    3335443    33 22 22222222221  1147


Q ss_pred             ccEEEECCCC
Q 024230           99 LNIFVNNVGT  108 (270)
Q Consensus        99 id~li~~ag~  108 (270)
                      +|++++|+|.
T Consensus       217 ~D~vid~~g~  226 (343)
T 3gaz_A          217 FDLVYDTLGG  226 (343)
T ss_dssp             EEEEEESSCT
T ss_pred             ceEEEECCCc
Confidence            9999999983

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.68  E-value=0.00026  Score=61.16  Aligned_cols=77  Identities=17%  Similarity=0.168  Sum_probs=56.0

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      .|++|+|+|+ |++|..+++.+...|++|+.+++++++.+.+.    +.|...   .+|..+.+ +.   +++.+.. +.
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~---~~d~~~~~-~~---~~~~~~~-~~  230 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK----ELGADL---VVNPLKED-AA---KFMKEKV-GG  230 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH----HTTCSE---EECTTTSC-HH---HHHHHHH-SS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----HCCCCE---EecCCCcc-HH---HHHHHHh-CC
Confidence            5899999999 88999999999999999999999988776432    334432   24665532 22   2233323 57


Q ss_pred             ccEEEECCCC
Q 024230           99 LNIFVNNVGT  108 (270)
Q Consensus        99 id~li~~ag~  108 (270)
                      +|++|+++|.
T Consensus       231 ~d~vid~~g~  240 (339)
T 1rjw_A          231 VHAAVVTAVS  240 (339)
T ss_dssp             EEEEEESSCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.67  E-value=0.00016  Score=59.84  Aligned_cols=81  Identities=16%  Similarity=0.223  Sum_probs=61.2

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCCh-------------------hHHHHHHHHHHhc--CCeEEEE
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTE-------------------TELNECIHHLQMK--GLKVTGS   74 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~-------------------~~~~~~~~~~~~~--~~~~~~~   74 (270)
                      .|++++|+|.|+ ||+|..+++.|++.|. ++.+++++.                   ++.+.+.+.+.+.  ..++..+
T Consensus        28 ~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~  106 (249)
T 1jw9_B           28 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV  106 (249)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEE
Confidence            578899999996 7999999999999997 799999987                   6777777777664  3455566


Q ss_pred             EccCCCHHHHHHHHHHHHHHcCCcccEEEECCC
Q 024230           75 VCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVG  107 (270)
Q Consensus        75 ~~D~~~~~~~~~~~~~i~~~~~~~id~li~~ag  107 (270)
                      ..++++ +++.+++        ...|++|.+..
T Consensus       107 ~~~~~~-~~~~~~~--------~~~DvVi~~~d  130 (249)
T 1jw9_B          107 NALLDD-AELAALI--------AEHDLVLDCTD  130 (249)
T ss_dssp             CSCCCH-HHHHHHH--------HTSSEEEECCS
T ss_pred             eccCCH-hHHHHHH--------hCCCEEEEeCC
Confidence            655653 3333333        46899999875

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.67  E-value=0.00035  Score=52.32  Aligned_cols=74  Identities=15%  Similarity=0.135  Sum_probs=56.7

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      +.++|.|. |.+|..+++.|.+.|++|++++++++..+.+.    ..+  +..+..|.++++.++++-      . .+.|
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~----~~g--~~~i~gd~~~~~~l~~a~------i-~~ad   73 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELR----ERG--VRAVLGNAANEEIMQLAH------L-ECAK   73 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH----HTT--CEEEESCTTSHHHHHHTT------G-GGCS
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH----HcC--CCEEECCCCCHHHHHhcC------c-ccCC
Confidence            35777776 88999999999999999999999998766543    333  456789999987655431      1 4789


Q ss_pred             EEEECCCC
Q 024230          101 IFVNNVGT  108 (270)
Q Consensus       101 ~li~~ag~  108 (270)
                      .+|.+.+.
T Consensus        74 ~vi~~~~~   81 (140)
T 3fwz_A           74 WLILTIPN   81 (140)
T ss_dssp             EEEECCSC
T ss_pred             EEEEECCC
Confidence            99988763

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.55  E-value=0.0003  Score=61.30  Aligned_cols=84  Identities=19%  Similarity=0.232  Sum_probs=53.7

Q ss_pred             CC-CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCH--HHHHHHHHHHHHHc
Q 024230           19 QG-MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR--PQRQTLINTVSSLF   95 (270)
Q Consensus        19 ~g-k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~i~~~~   95 (270)
                      .| ++|+|+|++|++|..++......|++|+.+.++.++..+..+.+++.|....+   |..+.  ++   +.+++.+..
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi---~~~~~~~~~---~~~~i~~~t  239 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVI---TEDQNNSRE---FGPTIKEWI  239 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEE---EHHHHHCGG---GHHHHHHHH
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEE---ecCccchHH---HHHHHHHHh
Confidence            47 89999999999999999888888999988887665532222333444544322   21110  12   223333221


Q ss_pred             ---CCcccEEEECCCC
Q 024230           96 ---NGKLNIFVNNVGT  108 (270)
Q Consensus        96 ---~~~id~li~~ag~  108 (270)
                         ++.+|++|.++|.
T Consensus       240 ~~~~~g~Dvvid~~G~  255 (364)
T 1gu7_A          240 KQSGGEAKLALNCVGG  255 (364)
T ss_dssp             HHHTCCEEEEEESSCH
T ss_pred             hccCCCceEEEECCCc
Confidence               2579999999983

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.53  E-value=0.00056  Score=59.59  Aligned_cols=82  Identities=16%  Similarity=0.159  Sum_probs=59.5

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCe-EEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC-
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGAT-VHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN-   96 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~-v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~-   96 (270)
                      .|++|||+|+ |++|...+......|++ |+.+++++++.+.+. ++   ...+..+..|..+.+++.   +++.+..+ 
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l---~~~~~~~~~~~~~~~~~~---~~v~~~t~g  250 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAK-EI---CPEVVTHKVERLSAEESA---KKIVESFGG  250 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHH-HH---CTTCEEEECCSCCHHHHH---HHHHHHTSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh---chhcccccccccchHHHH---HHHHHHhCC
Confidence            5889999998 99999999999999997 999999988876543 33   234444555655555544   34444442 


Q ss_pred             CcccEEEECCCC
Q 024230           97 GKLNIFVNNVGT  108 (270)
Q Consensus        97 ~~id~li~~ag~  108 (270)
                      ..+|+++.++|.
T Consensus       251 ~g~Dvvid~~g~  262 (363)
T 3m6i_A          251 IEPAVALECTGV  262 (363)
T ss_dssp             CCCSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999984

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=97.52  E-value=0.00031  Score=60.65  Aligned_cols=117  Identities=9%  Similarity=0.067  Sum_probs=72.3

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCC--e-----EEEeeCCh--hHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGA--T-----VHTCSRTE--TELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTV   91 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~--~-----v~l~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i   91 (270)
                      ++|+||||+|.||.+++..|+..|.  +     ++++++++  +.++-...++........ -.....+  +..+.+   
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~-~~~~~~~--~~~~~~---   77 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLL-KDVIATD--KEEIAF---   77 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTE-EEEEEES--CHHHHT---
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhccc-CCEEEcC--CcHHHh---
Confidence            5899999999999999999999885  5     99999975  345555555654321111 0111111  111222   


Q ss_pred             HHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-Cc-EEEEecCc
Q 024230           92 SSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AA-SIVLMSSA  158 (270)
Q Consensus        92 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g-~ii~iss~  158 (270)
                           ...|++|++||.... +  ..+.   .+.++.|+.....+.+.+    .+.. ++ .++++|-.
T Consensus        78 -----~daDvVvitAg~prk-p--G~tR---~dll~~N~~i~~~i~~~i----~~~~~~~~~vivvsNP  131 (333)
T 5mdh_A           78 -----KDLDVAILVGSMPRR-D--GMER---KDLLKANVKIFKCQGAAL----DKYAKKSVKVIVVGNP  131 (333)
T ss_dssp             -----TTCSEEEECCSCCCC-T--TCCT---TTTHHHHHHHHHHHHHHH----HHHSCTTCEEEECSSS
T ss_pred             -----CCCCEEEEeCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHH----HHhCCCCeEEEEcCCc
Confidence                 578999999987532 1  1222   234677877777666555    4443 35 46666654

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.51  E-value=0.00024  Score=60.25  Aligned_cols=74  Identities=20%  Similarity=0.287  Sum_probs=53.4

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      .|++|+|+|++|++|..++..+...|++|+.+++++++.+...    +.|....   .|..+.++   ..+.+     +.
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~----~~ga~~~---~~~~~~~~---~~~~~-----~~  189 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL----ALGAEEA---ATYAEVPE---RAKAW-----GG  189 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH----HTTCSEE---EEGGGHHH---HHHHT-----TS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----hcCCCEE---EECCcchh---HHHHh-----cC
Confidence            6899999999999999999999999999999999888765432    2343322   34433122   22222     57


Q ss_pred             ccEEEECCCC
Q 024230           99 LNIFVNNVGT  108 (270)
Q Consensus        99 id~li~~ag~  108 (270)
                      +|++|+ +|.
T Consensus       190 ~d~vid-~g~  198 (302)
T 1iz0_A          190 LDLVLE-VRG  198 (302)
T ss_dssp             EEEEEE-CSC
T ss_pred             ceEEEE-CCH
Confidence            999999 874

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.49  E-value=0.0032  Score=52.87  Aligned_cols=42  Identities=17%  Similarity=0.185  Sum_probs=36.9

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHH
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHH   63 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~   63 (270)
                      ++|.|.|+ |.+|..+|..|++.|++|++++|+++.+++..+.
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~   46 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKR   46 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence            68888875 8899999999999999999999999887776654

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.49  E-value=0.00033  Score=62.11  Aligned_cols=73  Identities=23%  Similarity=0.289  Sum_probs=54.9

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      ++.|++|+|.|+ |++|+.+++.+...|+ +|++++|+.++.+++.+++   +..+    .+.   +++.+.+       
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~---g~~~----~~~---~~l~~~l-------  225 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL---GGEA----VRF---DELVDHL-------  225 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH---TCEE----CCG---GGHHHHH-------
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc---CCce----ecH---HhHHHHh-------
Confidence            579999999998 9999999999999998 8999999988776655544   3321    222   2333332       


Q ss_pred             CCcccEEEECCCC
Q 024230           96 NGKLNIFVNNVGT  108 (270)
Q Consensus        96 ~~~id~li~~ag~  108 (270)
                       ...|++|++.+.
T Consensus       226 -~~aDvVi~at~~  237 (404)
T 1gpj_A          226 -ARSDVVVSATAA  237 (404)
T ss_dssp             -HTCSEEEECCSS
T ss_pred             -cCCCEEEEccCC
Confidence             368999999865

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.48  E-value=0.00023  Score=61.54  Aligned_cols=77  Identities=14%  Similarity=0.228  Sum_probs=54.2

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      .|++|+|+|+ |++|..++..+...|+ +|+.+++++++.+...+ +    ...   ..|..++ ++.+.+.++.   ++
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-l----a~~---v~~~~~~-~~~~~~~~~~---~~  230 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP-Y----ADR---LVNPLEE-DLLEVVRRVT---GS  230 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT-T----CSE---EECTTTS-CHHHHHHHHH---SS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h----HHh---ccCcCcc-CHHHHHHHhc---CC
Confidence            7899999999 9999999999999999 89999999877643321 1    111   2344442 3333333322   35


Q ss_pred             cccEEEECCCC
Q 024230           98 KLNIFVNNVGT  108 (270)
Q Consensus        98 ~id~li~~ag~  108 (270)
                      .+|++|+++|.
T Consensus       231 g~D~vid~~g~  241 (343)
T 2dq4_A          231 GVEVLLEFSGN  241 (343)
T ss_dssp             CEEEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            79999999984

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.47  E-value=0.0011  Score=56.82  Aligned_cols=115  Identities=15%  Similarity=0.112  Sum_probs=71.4

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCC--CeEEEeeCChhHHHHHHHHHHhcCC--eEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           22 TALVTGGTKGLGLAVVEELSMLG--ATVHTCSRTETELNECIHHLQMKGL--KVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G--~~v~l~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      +|.|+|++|.+|..++..|+..|  .+|+++++++  .+....++.+...  ++....    ...++++++        .
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~----~t~d~~~a~--------~   67 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYL----GPEQLPDCL--------K   67 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEE----SGGGHHHHH--------T
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEec----CCCCHHHHh--------C
Confidence            68999999999999999999998  6899999987  2333334433211  122110    012333344        5


Q ss_pred             cccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcc
Q 024230           98 KLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSAL  159 (270)
Q Consensus        98 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~  159 (270)
                      ..|++|+++|......   .+..   +.+..|+.....+.+.+.++-   ..+.+|++|-..
T Consensus        68 ~aDvVvi~ag~~~~~g---~~r~---dl~~~n~~i~~~i~~~i~~~~---p~a~viv~sNPv  120 (314)
T 1mld_A           68 GCDVVVIPAGVPRKPG---MTRD---DLFNTNATIVATLTAACAQHC---PDAMICIISNPV  120 (314)
T ss_dssp             TCSEEEECCSCCCCTT---CCGG---GGHHHHHHHHHHHHHHHHHHC---TTSEEEECSSCH
T ss_pred             CCCEEEECCCcCCCCC---CcHH---HHHHHHHHHHHHHHHHHHhhC---CCeEEEEECCCc
Confidence            7899999999854221   2221   236677776666666654432   346777765443

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.47  E-value=0.00079  Score=58.69  Aligned_cols=77  Identities=19%  Similarity=0.208  Sum_probs=54.6

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC-
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG-   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~-   97 (270)
                      .|++|||+| +|++|..++..+...|++|+.+++++++++.+ +   +.|....   .| .+.+++.+.   +.+..++ 
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~---~lGa~~v---i~-~~~~~~~~~---v~~~~~g~  256 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA-F---ALGADHG---IN-RLEEDWVER---VYALTGDR  256 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-H---HHTCSEE---EE-TTTSCHHHH---HHHHHTTC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH-H---HcCCCEE---Ec-CCcccHHHH---HHHHhCCC
Confidence            689999999 89999999999999999999999998876553 2   3344332   24 332333333   3333323 


Q ss_pred             cccEEEECCC
Q 024230           98 KLNIFVNNVG  107 (270)
Q Consensus        98 ~id~li~~ag  107 (270)
                      .+|+++.++|
T Consensus       257 g~D~vid~~g  266 (363)
T 3uog_A          257 GADHILEIAG  266 (363)
T ss_dssp             CEEEEEEETT
T ss_pred             CceEEEECCC
Confidence            7999999998

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.45  E-value=0.00051  Score=60.15  Aligned_cols=76  Identities=18%  Similarity=0.311  Sum_probs=52.7

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      .|++|+|+||+|++|..++..+...|++|+.++ ++++.+.    +++.|....   .|..+.+-    .+++.+ . +.
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~----~~~lGa~~v---~~~~~~~~----~~~~~~-~-~g  248 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASEL----VRKLGADDV---IDYKSGSV----EEQLKS-L-KP  248 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHH----HHHTTCSEE---EETTSSCH----HHHHHT-S-CC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHH----HHHcCCCEE---EECCchHH----HHHHhh-c-CC
Confidence            689999999999999999999999999999888 4454433    233454432   24444322    222322 2 57


Q ss_pred             ccEEEECCCC
Q 024230           99 LNIFVNNVGT  108 (270)
Q Consensus        99 id~li~~ag~  108 (270)
                      +|++|+|+|.
T Consensus       249 ~D~vid~~g~  258 (375)
T 2vn8_A          249 FDFILDNVGG  258 (375)
T ss_dssp             BSEEEESSCT
T ss_pred             CCEEEECCCC
Confidence            9999999985

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.43  E-value=4.2e-05  Score=64.35  Aligned_cols=45  Identities=20%  Similarity=0.276  Sum_probs=39.7

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNEC   60 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~   60 (270)
                      ..+++||+++|+|+ ||.|++++..|++.|+ +|.+++|+.++.+++
T Consensus       112 ~~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~l  157 (277)
T 3don_A          112 YEGIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNW  157 (277)
T ss_dssp             STTGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTC
T ss_pred             CCCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence            45789999999997 7999999999999998 899999998876543

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.43  E-value=0.003  Score=53.98  Aligned_cols=118  Identities=14%  Similarity=0.078  Sum_probs=73.3

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCC--hhHHHHHHHHHHhc------CCeEEEEEccCCCHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRT--ETELNECIHHLQMK------GLKVTGSVCDVSSRPQRQ   85 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~--~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~   85 (270)
                      .|.++.++|.|+|+ |.+|..+|..|+..|. +|++++++  ++..+....++...      ..++..  .+  +.    
T Consensus         3 ~m~~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~--t~--d~----   73 (315)
T 3tl2_A            3 AMTIKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIG--TS--DY----   73 (315)
T ss_dssp             -CCCCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEE--ES--CG----
T ss_pred             CcccCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEE--cC--CH----
Confidence            46667889999996 9999999999999999 99999999  44444333333321      112221  11  11    


Q ss_pred             HHHHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCc
Q 024230           86 TLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSA  158 (270)
Q Consensus        86 ~~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~  158 (270)
                             +.+ ...|++|.++|.... +  ..+..   +.+..|+.-...+.+.+..+   ...+.++++|-.
T Consensus        74 -------~a~-~~aDvVIiaag~p~k-p--g~~R~---dl~~~N~~i~~~i~~~i~~~---~p~a~vlvvsNP  129 (315)
T 3tl2_A           74 -------ADT-ADSDVVVITAGIARK-P--GMSRD---DLVATNSKIMKSITRDIAKH---SPNAIIVVLTNP  129 (315)
T ss_dssp             -------GGG-TTCSEEEECCSCCCC-T--TCCHH---HHHHHHHHHHHHHHHHHHHH---CTTCEEEECCSS
T ss_pred             -------HHh-CCCCEEEEeCCCCCC-C--CCCHH---HHHHHHHHHHHHHHHHHHHh---CCCeEEEECCCh
Confidence                   112 578999999997432 1  23433   44667766655555555432   234566666643

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.40  E-value=0.0012  Score=55.21  Aligned_cols=67  Identities=22%  Similarity=0.246  Sum_probs=51.6

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      +|+++|.|+ ||.|++++..|++.|.+|.+++|+.++.+++. ++   +..  ..  +..+              + ...
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~---~~~--~~--~~~~--------------l-~~~  173 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RL---GCD--CF--MEPP--------------K-SAF  173 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HH---TCE--EE--SSCC--------------S-SCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HC---CCe--Ee--cHHH--------------h-ccC
Confidence            899999997 99999999999999999999999999887776 44   221  11  2222              1 257


Q ss_pred             cEEEECCCCCC
Q 024230          100 NIFVNNVGTSV  110 (270)
Q Consensus       100 d~li~~ag~~~  110 (270)
                      |++||+.....
T Consensus       174 DiVInaTp~Gm  184 (269)
T 3phh_A          174 DLIINATSASL  184 (269)
T ss_dssp             SEEEECCTTCC
T ss_pred             CEEEEcccCCC
Confidence            99999976643

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.38  E-value=0.0014  Score=56.85  Aligned_cols=82  Identities=26%  Similarity=0.344  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHcCC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSS-RPQRQTLINTVSSLFNG   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~~   97 (270)
                      .|++|+|+|+ |++|..++..+...|++|+++++++++++.+    ++.|....   .|..+ .+..+++.+......++
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~----~~lGa~~~---~~~~~~~~~~~~i~~~~~~~~g~  239 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVA----KNCGADVT---LVVDPAKEEESSIIERIRSAIGD  239 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----HHTTCSEE---EECCTTTSCHHHHHHHHHHHSSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH----HHhCCCEE---EcCcccccHHHHHHHHhccccCC
Confidence            5899999996 8999999999889999999999988876543    23454422   23332 22222222211100124


Q ss_pred             cccEEEECCCC
Q 024230           98 KLNIFVNNVGT  108 (270)
Q Consensus        98 ~id~li~~ag~  108 (270)
                      .+|++|+++|.
T Consensus       240 g~D~vid~~g~  250 (352)
T 1e3j_A          240 LPNVTIDCSGN  250 (352)
T ss_dssp             CCSEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            69999999984

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=97.33  E-value=0.0015  Score=57.06  Aligned_cols=79  Identities=14%  Similarity=0.218  Sum_probs=55.6

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      -.|++|+|+|++|++|...+......|++|+.+. ++++.+ .   +++.|....   .|..+.+    +.+++.+..++
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~-~---~~~lGa~~v---i~~~~~~----~~~~v~~~t~g  230 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD-L---AKSRGAEEV---FDYRAPN----LAQTIRTYTKN  230 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH-H---HHHTTCSEE---EETTSTT----HHHHHHHHTTT
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH-H---HHHcCCcEE---EECCCch----HHHHHHHHccC
Confidence            4789999999999999999999999999998886 555544 2   234454322   2444432    33444444446


Q ss_pred             cccEEEECCCC
Q 024230           98 KLNIFVNNVGT  108 (270)
Q Consensus        98 ~id~li~~ag~  108 (270)
                      ++|+++.++|.
T Consensus       231 ~~d~v~d~~g~  241 (371)
T 3gqv_A          231 NLRYALDCITN  241 (371)
T ss_dssp             CCCEEEESSCS
T ss_pred             CccEEEECCCc
Confidence            79999999985

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.30  E-value=0.0045  Score=53.13  Aligned_cols=115  Identities=11%  Similarity=-0.006  Sum_probs=74.4

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCC--eEEEeeCChhHHHHHHHHHHhc----CCeEEEEEccCCCHHHHHHHHHHH
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTETELNECIHHLQMK----GLKVTGSVCDVSSRPQRQTLINTV   91 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~i   91 (270)
                      -+.++|.|+|+ |.+|.+++..|+..|.  +|+++++++++.+....+++..    +..+.....|   .    +.    
T Consensus         3 ~~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~----~a----   70 (326)
T 3pqe_A            3 KHVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---Y----ED----   70 (326)
T ss_dssp             CSCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---G----GG----
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---H----HH----
Confidence            34678999996 9999999999999997  8999999998877766666542    1122222211   1    11    


Q ss_pred             HHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEecCc
Q 024230           92 SSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRAS-GAASIVLMSSA  158 (270)
Q Consensus        92 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~ii~iss~  158 (270)
                         + ...|++|.++|.... +  ..+..   +.+..|+.-...+.+.+    .+. ..+.++++|-.
T Consensus        71 ---~-~~aDvVvi~ag~p~k-p--G~~R~---dL~~~N~~Iv~~i~~~I----~~~~p~a~vlvvtNP  124 (326)
T 3pqe_A           71 ---C-KDADIVCICAGANQK-P--GETRL---ELVEKNLKIFKGIVSEV----MASGFDGIFLVATNP  124 (326)
T ss_dssp             ---G-TTCSEEEECCSCCCC-T--TCCHH---HHHHHHHHHHHHHHHHH----HHTTCCSEEEECSSS
T ss_pred             ---h-CCCCEEEEecccCCC-C--CccHH---HHHHHHHHHHHHHHHHH----HHhcCCeEEEEcCCh
Confidence               2 578999999997422 1  23333   34667766655555555    333 34566666644

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=97.27  E-value=0.0016  Score=57.71  Aligned_cols=43  Identities=21%  Similarity=0.271  Sum_probs=38.8

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHH
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNEC   60 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~   60 (270)
                      .+.|++|+|+|+ |.+|..+++.+...|++|++++++++.++..
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            578999999996 8999999999999999999999998877654

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=97.24  E-value=0.0018  Score=56.23  Aligned_cols=77  Identities=25%  Similarity=0.312  Sum_probs=54.4

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHC-CCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSML-GATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~-G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      .|++|+|+|+ |++|..++...... |++|+.+++++++.+.+    ++.|....   .|..++  +.+.+.+   ..++
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~----~~lGa~~v---i~~~~~--~~~~v~~---~~~g  252 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLA----ERLGADHV---VDARRD--PVKQVME---LTRG  252 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHH----HHTTCSEE---EETTSC--HHHHHHH---HTTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH----HHhCCCEE---Eeccch--HHHHHHH---HhCC
Confidence            6889999999 89999999888888 99999999988876543    23454322   244443  3333322   2223


Q ss_pred             -cccEEEECCCC
Q 024230           98 -KLNIFVNNVGT  108 (270)
Q Consensus        98 -~id~li~~ag~  108 (270)
                       .+|++|.++|.
T Consensus       253 ~g~Dvvid~~G~  264 (359)
T 1h2b_A          253 RGVNVAMDFVGS  264 (359)
T ss_dssp             CCEEEEEESSCC
T ss_pred             CCCcEEEECCCC
Confidence             79999999984

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=97.23  E-value=0.0018  Score=56.75  Aligned_cols=79  Identities=22%  Similarity=0.299  Sum_probs=55.6

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCC-CeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCC--CHHHHHHHHHHHHHHc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLG-ATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVS--SRPQRQTLINTVSSLF   95 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G-~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~--~~~~~~~~~~~i~~~~   95 (270)
                      .|++|||+| +|++|..++..+...| ++|+.+++++++.+.+    ++.|....   .|..  +.+++   .+++.+..
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~----~~lGa~~v---i~~~~~~~~~~---~~~v~~~~  263 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLA----EEIGADLT---LNRRETSVEER---RKAIMDIT  263 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH----HHTTCSEE---EETTTSCHHHH---HHHHHHHT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHH----HHcCCcEE---EeccccCcchH---HHHHHHHh
Confidence            578999999 8999999999999999 5999999998876543    23454322   2332  23343   33444443


Q ss_pred             CC-cccEEEECCCC
Q 024230           96 NG-KLNIFVNNVGT  108 (270)
Q Consensus        96 ~~-~id~li~~ag~  108 (270)
                      ++ .+|++|+++|.
T Consensus       264 ~g~g~Dvvid~~g~  277 (380)
T 1vj0_A          264 HGRGADFILEATGD  277 (380)
T ss_dssp             TTSCEEEEEECSSC
T ss_pred             CCCCCcEEEECCCC
Confidence            33 69999999985

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.23  E-value=0.0019  Score=55.66  Aligned_cols=77  Identities=17%  Similarity=0.217  Sum_probs=55.0

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      .|++|||+|+ |++|...+..+...|++|+.+++++++.+.+    ++.|....   .|..+.+-.    +.+.+.. +.
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~----~~lGa~~~---i~~~~~~~~----~~~~~~~-g~  232 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLA----RRLGAEVA---VNARDTDPA----AWLQKEI-GG  232 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHH----HHTTCSEE---EETTTSCHH----HHHHHHH-SS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH----HHcCCCEE---EeCCCcCHH----HHHHHhC-CC
Confidence            6899999997 8999999999999999999999998876543    33454432   244443322    2233333 58


Q ss_pred             ccEEEECCCC
Q 024230           99 LNIFVNNVGT  108 (270)
Q Consensus        99 id~li~~ag~  108 (270)
                      +|.++.++|.
T Consensus       233 ~d~vid~~g~  242 (340)
T 3s2e_A          233 AHGVLVTAVS  242 (340)
T ss_dssp             EEEEEESSCC
T ss_pred             CCEEEEeCCC
Confidence            9999999873

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.20  E-value=0.0018  Score=54.99  Aligned_cols=74  Identities=19%  Similarity=0.338  Sum_probs=54.1

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      ..+++||+++|.|+ |.||+++++.+...|++|++++|+.++.+...    +.+.++  +.     .+++.+++      
T Consensus       152 ~~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~----~~g~~~--~~-----~~~l~~~l------  213 (300)
T 2rir_A          152 DYTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARIT----EMGLVP--FH-----TDELKEHV------  213 (300)
T ss_dssp             SSCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTTCEE--EE-----GGGHHHHS------
T ss_pred             CCCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----HCCCeE--Ec-----hhhHHHHh------
Confidence            46899999999996 99999999999999999999999987654432    233322  11     12222222      


Q ss_pred             cCCcccEEEECCCC
Q 024230           95 FNGKLNIFVNNVGT  108 (270)
Q Consensus        95 ~~~~id~li~~ag~  108 (270)
                        ...|+++++...
T Consensus       214 --~~aDvVi~~~p~  225 (300)
T 2rir_A          214 --KDIDICINTIPS  225 (300)
T ss_dssp             --TTCSEEEECCSS
T ss_pred             --hCCCEEEECCCh
Confidence              578999999874

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.19  E-value=0.0028  Score=53.47  Aligned_cols=91  Identities=12%  Similarity=0.207  Sum_probs=66.8

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCCh------------------hHHHHHHHHHHhc--CCeEEEE
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTE------------------TELNECIHHLQMK--GLKVTGS   74 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~------------------~~~~~~~~~~~~~--~~~~~~~   74 (270)
                      -.|++++|+|.|+ ||+|..+++.|+..|. ++.++|.+.                  .+.+.+.+.+++.  ..++..+
T Consensus        32 ~kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~  110 (292)
T 3h8v_A           32 EKIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVH  110 (292)
T ss_dssp             CGGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEe
Confidence            4678899999986 7999999999999996 799998876                  5555566666654  3567777


Q ss_pred             EccCCCHHHHHHHHHHHHHH-cC--CcccEEEECCC
Q 024230           75 VCDVSSRPQRQTLINTVSSL-FN--GKLNIFVNNVG  107 (270)
Q Consensus        75 ~~D~~~~~~~~~~~~~i~~~-~~--~~id~li~~ag  107 (270)
                      ..++++.+.+..+++.+... +.  ...|++|.+..
T Consensus       111 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D  146 (292)
T 3h8v_A          111 NYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD  146 (292)
T ss_dssp             CCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS
T ss_pred             cccCCcHHHHHHHhhhhcccccccCCCCCEEEECCc
Confidence            77887777777766544321 10  36899998875

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=97.19  E-value=0.00092  Score=58.31  Aligned_cols=78  Identities=21%  Similarity=0.187  Sum_probs=54.1

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHH-CCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSM-LGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~-~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      .|++|||+||+|++|...+..... .|++|+.+++++++.+.+    ++.|....   .|-.+  +   ..+++.+..++
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~----~~lGad~v---i~~~~--~---~~~~v~~~~~~  238 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWV----KSLGAHHV---IDHSK--P---LAAEVAALGLG  238 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHH----HHTTCSEE---ECTTS--C---HHHHHHTTCSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHH----HHcCCCEE---EeCCC--C---HHHHHHHhcCC
Confidence            588999999999999887776665 589999999988876543    33454432   23332  2   33334443335


Q ss_pred             cccEEEECCCC
Q 024230           98 KLNIFVNNVGT  108 (270)
Q Consensus        98 ~id~li~~ag~  108 (270)
                      .+|+++.|+|.
T Consensus       239 g~Dvvid~~g~  249 (363)
T 4dvj_A          239 APAFVFSTTHT  249 (363)
T ss_dssp             CEEEEEECSCH
T ss_pred             CceEEEECCCc
Confidence            79999999984

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.18  E-value=0.0034  Score=54.86  Aligned_cols=86  Identities=16%  Similarity=0.154  Sum_probs=59.1

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccC-----------CCHHHHH
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDV-----------SSRPQRQ   85 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----------~~~~~~~   85 (270)
                      .+++++|+|+|+ |.+|..+++.+...|++|++++|++++++.+.+    .|.++  +..|.           ...+...
T Consensus       181 ~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~----lGa~~--~~l~~~~~~~~gya~~~~~~~~~  253 (381)
T 3p2y_A          181 TVKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS----VGAQW--LDLGIDAAGEGGYARELSEAERA  253 (381)
T ss_dssp             EECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH----TTCEE--CCCC-------------CHHHHH
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCeE--EeccccccccccchhhhhHHHHh
Confidence            568999999999 799999999999999999999999988766433    34332  22211           0111122


Q ss_pred             HHHHHHHHHcCCcccEEEECCCCCC
Q 024230           86 TLINTVSSLFNGKLNIFVNNVGTSV  110 (270)
Q Consensus        86 ~~~~~i~~~~~~~id~li~~ag~~~  110 (270)
                      .....+.+.. ...|++|.++....
T Consensus       254 ~~~~~l~e~l-~~aDIVI~tv~iPg  277 (381)
T 3p2y_A          254 QQQQALEDAI-TKFDIVITTALVPG  277 (381)
T ss_dssp             HHHHHHHHHH-TTCSEEEECCCCTT
T ss_pred             hhHHHHHHHH-hcCCEEEECCCCCC
Confidence            3334444545 68999999876543

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.17  E-value=0.0038  Score=53.56  Aligned_cols=118  Identities=9%  Similarity=0.032  Sum_probs=67.0

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCC--eEEEeeCChhHHHHHHHHHHhcC---CeEEEEEccCCCHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTETELNECIHHLQMKG---LKVTGSVCDVSSRPQRQTLIN   89 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~   89 (270)
                      .++-.+++|.|+|+ |.+|.+++..|+..|.  +|++++++++.++....++....   ..+... .+  +.        
T Consensus         4 ~~~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~-~~--~~--------   71 (326)
T 3vku_A            4 ITDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIY-SA--EY--------   71 (326)
T ss_dssp             ---CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEE-EC--CG--------
T ss_pred             cccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEE-EC--cH--------
Confidence            35667789999996 9999999999999997  89999999888776666665421   122222 11  11        


Q ss_pred             HHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCc
Q 024230           90 TVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSA  158 (270)
Q Consensus        90 ~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~  158 (270)
                         +.+ ...|++|.++|.... +  ..+   -.+.++.|+--...+.    +.+.+.. ++.++++|-.
T Consensus        72 ---~a~-~~aDiVvi~ag~~~k-p--G~t---R~dL~~~N~~I~~~i~----~~i~~~~p~a~ilvvtNP  127 (326)
T 3vku_A           72 ---SDA-KDADLVVITAGAPQK-P--GET---RLDLVNKNLKILKSIV----DPIVDSGFNGIFLVAANP  127 (326)
T ss_dssp             ---GGG-TTCSEEEECCCCC----------------------CHHHHH----HHHHTTTCCSEEEECSSS
T ss_pred             ---HHh-cCCCEEEECCCCCCC-C--Cch---HHHHHHHHHHHHHHHH----HHHHhcCCceEEEEccCc
Confidence               112 578999999997422 1  112   2334556655444444    4445443 4566666543

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.15  E-value=0.011  Score=50.73  Aligned_cols=118  Identities=11%  Similarity=0.066  Sum_probs=75.2

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCC--eEEEeeCChhHHHHHHHHHHhcC---CeEEEEEccCCCHHHHHHHHHHH
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTETELNECIHHLQMKG---LKVTGSVCDVSSRPQRQTLINTV   91 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~i   91 (270)
                      ....++|.|+|+ |.+|.+++..|+.+|.  +|++++++++.++....++....   ........+  |.   + .    
T Consensus        16 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~--d~---~-~----   84 (331)
T 4aj2_A           16 QVPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSK--DY---S-V----   84 (331)
T ss_dssp             -CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECS--SG---G-G----
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcC--CH---H-H----
Confidence            345679999997 9999999999999997  89999999888777666666421   111112111  21   1 1    


Q ss_pred             HHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCc
Q 024230           92 SSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSA  158 (270)
Q Consensus        92 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~  158 (270)
                         + ...|++|.++|.... +  ..+..   +.++.|+-=...+.+.+..+   ..++.++++|-.
T Consensus        85 ---~-~~aDiVvi~aG~~~k-p--G~tR~---dL~~~N~~I~~~i~~~i~~~---~p~a~vlvvtNP  138 (331)
T 4aj2_A           85 ---T-ANSKLVIITAGARQQ-E--GESRL---NLVQRNVNIFKFIIPNVVKY---SPQCKLLIVSNP  138 (331)
T ss_dssp             ---G-TTEEEEEECCSCCCC-T--TCCGG---GGHHHHHHHHHHHHHHHHHH---CTTCEEEECSSS
T ss_pred             ---h-CCCCEEEEccCCCCC-C--CccHH---HHHHHHHHHHHHHHHHHHHH---CCCeEEEEecCh
Confidence               2 578999999997532 2  22322   34666665555555555432   234567766654

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.15  E-value=0.00045  Score=59.30  Aligned_cols=75  Identities=27%  Similarity=0.267  Sum_probs=50.4

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcccE
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNI  101 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~  101 (270)
                      +|+|+|++|++|..++..+...|++|+.+++++++.+.+    ++.|....   .|..+.+  .+.+.   ...++.+|+
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~----~~lGa~~~---i~~~~~~--~~~~~---~~~~~~~d~  219 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL----RVLGAKEV---LAREDVM--AERIR---PLDKQRWAA  219 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH----HHTTCSEE---EECC--------------CCSCCEEE
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH----HHcCCcEE---EecCCcH--HHHHH---HhcCCcccE
Confidence            799999999999999999999999999999988776543    23444332   2444322  11222   222247999


Q ss_pred             EEECCCC
Q 024230          102 FVNNVGT  108 (270)
Q Consensus       102 li~~ag~  108 (270)
                      +|+++|.
T Consensus       220 vid~~g~  226 (328)
T 1xa0_A          220 AVDPVGG  226 (328)
T ss_dssp             EEECSTT
T ss_pred             EEECCcH
Confidence            9999984

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=97.13  E-value=0.0011  Score=58.22  Aligned_cols=81  Identities=17%  Similarity=0.176  Sum_probs=55.4

Q ss_pred             CCCCEEEEec-CCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           18 LQGMTALVTG-GTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        18 l~gk~vlItG-~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      -.|.+|+|.| |+|++|...+......|++|+.+++++++.+.+.    +.|....   .|-.+.+ +.+.+.++...  
T Consensus       169 ~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~~---~~~~~~~-~~~~v~~~t~~--  238 (379)
T 3iup_A          169 LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLK----AQGAVHV---CNAASPT-FMQDLTEALVS--  238 (379)
T ss_dssp             HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHH----HTTCSCE---EETTSTT-HHHHHHHHHHH--
T ss_pred             cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----hCCCcEE---EeCCChH-HHHHHHHHhcC--
Confidence            4688999997 9999999999998899999999999888765432    3454322   2333322 22222222211  


Q ss_pred             CcccEEEECCCC
Q 024230           97 GKLNIFVNNVGT  108 (270)
Q Consensus        97 ~~id~li~~ag~  108 (270)
                      ..+|+++.|+|.
T Consensus       239 ~g~d~v~d~~g~  250 (379)
T 3iup_A          239 TGATIAFDATGG  250 (379)
T ss_dssp             HCCCEEEESCEE
T ss_pred             CCceEEEECCCc
Confidence            369999999985

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=97.11  E-value=0.0055  Score=53.13  Aligned_cols=79  Identities=20%  Similarity=0.317  Sum_probs=54.4

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCC--CHHHHHHHHHHHHHHc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVS--SRPQRQTLINTVSSLF   95 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~--~~~~~~~~~~~i~~~~   95 (270)
                      .|++|+|+|+ |++|...+......|+ +|+.+++++++.+.+    ++.|....   .|..  +.++   ..+++.+..
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a----~~lGa~~v---i~~~~~~~~~---~~~~i~~~~  239 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA----KEIGADLV---LQISKESPQE---IARKVEGQL  239 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH----HHTTCSEE---EECSSCCHHH---HHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH----HHhCCCEE---EcCcccccch---HHHHHHHHh
Confidence            5889999996 8999999998888999 899999988876543    33454322   2333  2233   333333333


Q ss_pred             CCcccEEEECCCC
Q 024230           96 NGKLNIFVNNVGT  108 (270)
Q Consensus        96 ~~~id~li~~ag~  108 (270)
                      ++.+|++|.++|.
T Consensus       240 ~~g~D~vid~~g~  252 (356)
T 1pl8_A          240 GCKPEVTIECTGA  252 (356)
T ss_dssp             TSCCSEEEECSCC
T ss_pred             CCCCCEEEECCCC
Confidence            2479999999984

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=97.10  E-value=0.0021  Score=56.25  Aligned_cols=79  Identities=16%  Similarity=0.244  Sum_probs=55.5

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHcC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSS-RPQRQTLINTVSSLFN   96 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~   96 (270)
                      .|.+|||+|+ |++|...+......|+ +|+.+++++++++.+    ++.|....   .|..+ .++   +.+++.+..+
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a----~~lGa~~v---i~~~~~~~~---~~~~i~~~~~  261 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETA----KKFGVNEF---VNPKDHDKP---IQEVIVDLTD  261 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHH----HTTTCCEE---ECGGGCSSC---HHHHHHHHTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH----HHcCCcEE---EccccCchh---HHHHHHHhcC
Confidence            5889999998 9999999999989999 799999998887532    33454332   23321 122   2333444444


Q ss_pred             CcccEEEECCCC
Q 024230           97 GKLNIFVNNVGT  108 (270)
Q Consensus        97 ~~id~li~~ag~  108 (270)
                      +.+|++|.++|.
T Consensus       262 gg~D~vid~~g~  273 (378)
T 3uko_A          262 GGVDYSFECIGN  273 (378)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            689999999984

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.09  E-value=0.0027  Score=53.68  Aligned_cols=73  Identities=18%  Similarity=0.337  Sum_probs=52.9

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      ..+++||+++|.|. |.||+.+++.+...|++|++++|+.++.+..    .+.+.+.  +  +   .+++.+++      
T Consensus       150 ~~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~----~~~g~~~--~--~---~~~l~~~l------  211 (293)
T 3d4o_A          150 DFTIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLARI----AEMGMEP--F--H---ISKAAQEL------  211 (293)
T ss_dssp             SSCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHTTSEE--E--E---GGGHHHHT------
T ss_pred             CCCCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHH----HHCCCee--c--C---hhhHHHHh------
Confidence            35799999999995 8999999999999999999999998765433    2234332  1  1   12222222      


Q ss_pred             cCCcccEEEECCC
Q 024230           95 FNGKLNIFVNNVG  107 (270)
Q Consensus        95 ~~~~id~li~~ag  107 (270)
                        ...|+++++..
T Consensus       212 --~~aDvVi~~~p  222 (293)
T 3d4o_A          212 --RDVDVCINTIP  222 (293)
T ss_dssp             --TTCSEEEECCS
T ss_pred             --cCCCEEEECCC
Confidence              57899999875

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.09  E-value=0.00089  Score=54.52  Aligned_cols=72  Identities=7%  Similarity=-0.047  Sum_probs=55.1

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      .+.++|.|+ |.+|+.+++.|.++|+ |++++++++..+...     .  .+.++..|.++++.++++-      . ...
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-----~--~~~~i~gd~~~~~~l~~a~------i-~~a   72 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-----S--GANFVHGDPTRVSDLEKAN------V-RGA   72 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-----T--TCEEEESCTTCHHHHHHTT------C-TTC
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-----c--CCeEEEcCCCCHHHHHhcC------c-chh
Confidence            457889987 8999999999999999 999999988765432     2  3667889999987655441      1 578


Q ss_pred             cEEEECCC
Q 024230          100 NIFVNNVG  107 (270)
Q Consensus       100 d~li~~ag  107 (270)
                      |.+|.+.+
T Consensus        73 d~vi~~~~   80 (234)
T 2aef_A           73 RAVIVDLE   80 (234)
T ss_dssp             SEEEECCS
T ss_pred             cEEEEcCC
Confidence            88888765

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.08  E-value=0.0011  Score=52.91  Aligned_cols=42  Identities=26%  Similarity=0.344  Sum_probs=37.4

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHH
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHH   63 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~   63 (270)
                      +++|+|++|.+|..+++.|++.|++|.+++|+++..+++.+.
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~   43 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE   43 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            689999999999999999999999999999998877665543

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.05  E-value=0.0013  Score=55.40  Aligned_cols=47  Identities=21%  Similarity=0.203  Sum_probs=41.4

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIH   62 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~   62 (270)
                      ..++++|+++|+|+ ||.|++++..|++.|+ +|.+++|+.++.+++.+
T Consensus       117 ~~~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~  164 (282)
T 3fbt_A          117 RVEIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYG  164 (282)
T ss_dssp             TCCCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCT
T ss_pred             CCCccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence            56789999999997 6999999999999998 89999999988766543

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.04  E-value=0.0039  Score=54.41  Aligned_cols=79  Identities=19%  Similarity=0.263  Sum_probs=54.4

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHcC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSS-RPQRQTLINTVSSLFN   96 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~   96 (270)
                      .|++|||+|+ |++|..++..+...|+ +|+.+++++++++.+    ++.|....   .|..+ .+++.+.+.++   .+
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~----~~lGa~~v---i~~~~~~~~~~~~~~~~---~~  260 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKA----KVFGATDF---VNPNDHSEPISQVLSKM---TN  260 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH----HHTTCCEE---ECGGGCSSCHHHHHHHH---HT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH----HHhCCceE---EeccccchhHHHHHHHH---hC
Confidence            5789999995 9999999999999999 799999998877543    23444322   24332 12233333332   22


Q ss_pred             CcccEEEECCCC
Q 024230           97 GKLNIFVNNVGT  108 (270)
Q Consensus        97 ~~id~li~~ag~  108 (270)
                      +.+|++|+++|.
T Consensus       261 ~g~D~vid~~g~  272 (374)
T 1cdo_A          261 GGVDFSLECVGN  272 (374)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            579999999985

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=97.03  E-value=0.0042  Score=54.27  Aligned_cols=79  Identities=19%  Similarity=0.241  Sum_probs=54.0

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHcC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSS-RPQRQTLINTVSSLFN   96 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~   96 (270)
                      .|++|+|+|+ |++|..++..+...|+ +|+.+++++++.+.+    ++.|....   .|..+ .+++.+.+   .+..+
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a----~~lGa~~v---i~~~~~~~~~~~~v---~~~~~  263 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA----KALGATDC---LNPRELDKPVQDVI---TELTA  263 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH----HHTTCSEE---ECGGGCSSCHHHHH---HHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH----HHhCCcEE---EccccccchHHHHH---HHHhC
Confidence            5789999995 9999999998888999 799999998876543    23444322   23332 12233333   22222


Q ss_pred             CcccEEEECCCC
Q 024230           97 GKLNIFVNNVGT  108 (270)
Q Consensus        97 ~~id~li~~ag~  108 (270)
                      +.+|++|.++|.
T Consensus       264 ~g~Dvvid~~G~  275 (376)
T 1e3i_A          264 GGVDYSLDCAGT  275 (376)
T ss_dssp             SCBSEEEESSCC
T ss_pred             CCccEEEECCCC
Confidence            579999999985

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=97.02  E-value=0.0044  Score=54.10  Aligned_cols=79  Identities=20%  Similarity=0.334  Sum_probs=54.4

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHcC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSS-RPQRQTLINTVSSLFN   96 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~   96 (270)
                      .|++|||+| +|++|..++..+...|+ +|+.+++++++.+.+    ++.|....   .|..+ .+++.+.+   .+..+
T Consensus       191 ~g~~VlV~G-aG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~----~~lGa~~v---i~~~~~~~~~~~~~---~~~~~  259 (374)
T 2jhf_A          191 QGSTCAVFG-LGGVGLSVIMGCKAAGAARIIGVDINKDKFAKA----KEVGATEC---VNPQDYKKPIQEVL---TEMSN  259 (374)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH----HHTTCSEE---ECGGGCSSCHHHHH---HHHTT
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH----HHhCCceE---ecccccchhHHHHH---HHHhC
Confidence            579999999 59999999999999999 799999998876543    23344322   24332 12233333   33332


Q ss_pred             CcccEEEECCCC
Q 024230           97 GKLNIFVNNVGT  108 (270)
Q Consensus        97 ~~id~li~~ag~  108 (270)
                      +.+|++|+++|.
T Consensus       260 ~g~D~vid~~g~  271 (374)
T 2jhf_A          260 GGVDFSFEVIGR  271 (374)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCcEEEECCCC
Confidence            579999999985

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.02  E-value=0.014  Score=50.00  Aligned_cols=114  Identities=11%  Similarity=0.063  Sum_probs=69.9

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhc------CCeEEEEEccCCCHHHHHHHHHH
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMK------GLKVTGSVCDVSSRPQRQTLINT   90 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~   90 (270)
                      ++.++|.|+|+ |.+|.+++..|+..|. +|+++++++++.+....++...      ..++.. ..|   .    +.+  
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-t~d---~----~a~--   73 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTG-AND---Y----AAI--   73 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-ESS---G----GGG--
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEE-eCC---H----HHH--
Confidence            45678999998 9999999999999998 9999999988765444444332      222221 112   1    122  


Q ss_pred             HHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEecCc
Q 024230           91 VSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRAS-GAASIVLMSSA  158 (270)
Q Consensus        91 i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~ii~iss~  158 (270)
                            ..-|++|.++|......   .+.   .+.+..|+.-...+.+.+    .+. ..+.++++|-.
T Consensus        74 ------~~aDiVIiaag~p~k~G---~~R---~dl~~~N~~i~~~i~~~i----~~~~p~a~iivvtNP  126 (324)
T 3gvi_A           74 ------EGADVVIVTAGVPRKPG---MSR---DDLLGINLKVMEQVGAGI----KKYAPEAFVICITNP  126 (324)
T ss_dssp             ------TTCSEEEECCSCCCC-----------CHHHHHHHHHHHHHHHHH----HHHCTTCEEEECCSS
T ss_pred             ------CCCCEEEEccCcCCCCC---CCH---HHHHHhhHHHHHHHHHHH----HHHCCCeEEEecCCC
Confidence                  57899999998743211   122   234556665555554444    433 34566666644

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=97.01  E-value=0.0035  Score=54.76  Aligned_cols=78  Identities=26%  Similarity=0.408  Sum_probs=54.4

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH---H
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS---L   94 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~---~   94 (270)
                      .|++|||+|+ |++|...+......|+ +|+.+++++++.+. .++   .|....   .|..+.+    ..+++.+   .
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~-a~~---lGa~~v---i~~~~~~----~~~~i~~~~~~  249 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRL-AEE---VGATAT---VDPSAGD----VVEAIAGPVGL  249 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHH-HHH---HTCSEE---ECTTSSC----HHHHHHSTTSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH-HHH---cCCCEE---ECCCCcC----HHHHHHhhhhc
Confidence            5899999998 9999999999999999 89999998877653 333   343322   3444432    2233333   3


Q ss_pred             cCCcccEEEECCCC
Q 024230           95 FNGKLNIFVNNVGT  108 (270)
Q Consensus        95 ~~~~id~li~~ag~  108 (270)
                      .++.+|++|.++|.
T Consensus       250 ~~gg~Dvvid~~G~  263 (370)
T 4ej6_A          250 VPGGVDVVIECAGV  263 (370)
T ss_dssp             STTCEEEEEECSCC
T ss_pred             cCCCCCEEEECCCC
Confidence            33589999999884

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=96.98  E-value=0.0014  Score=56.00  Aligned_cols=73  Identities=23%  Similarity=0.213  Sum_probs=51.1

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      |+ |+|+|++|++|...+..+...|++|+.+++++++.+.+. +   .|....+   |..+.+.       +.+..++.+
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~-~---lGa~~vi---~~~~~~~-------~~~~~~~~~  212 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLK-S---LGANRIL---SRDEFAE-------SRPLEKQLW  212 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH-H---HTCSEEE---EGGGSSC-------CCSSCCCCE
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-h---cCCCEEE---ecCCHHH-------HHhhcCCCc
Confidence            46 999999999999999999999999999999988765443 2   3444332   2222111       112222579


Q ss_pred             cEEEECCC
Q 024230          100 NIFVNNVG  107 (270)
Q Consensus       100 d~li~~ag  107 (270)
                      |+++.++|
T Consensus       213 d~v~d~~g  220 (324)
T 3nx4_A          213 AGAIDTVG  220 (324)
T ss_dssp             EEEEESSC
T ss_pred             cEEEECCC
Confidence            99999987

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=96.98  E-value=0.0039  Score=54.34  Aligned_cols=79  Identities=18%  Similarity=0.249  Sum_probs=53.9

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHcC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSS-RPQRQTLINTVSSLFN   96 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~   96 (270)
                      .|++|||+|+ |++|..++..+...|+ +|+.+++++++.+.+. +   .|....   .|..+ .+++.+   ++.+..+
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~-~---lGa~~v---i~~~~~~~~~~~---~v~~~~~  258 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-E---FGATEC---INPQDFSKPIQE---VLIEMTD  258 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-H---HTCSEE---ECGGGCSSCHHH---HHHHHTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-H---cCCceE---eccccccccHHH---HHHHHhC
Confidence            5789999995 9999999998888999 7999999988765432 2   343322   23332 122333   3333333


Q ss_pred             CcccEEEECCCC
Q 024230           97 GKLNIFVNNVGT  108 (270)
Q Consensus        97 ~~id~li~~ag~  108 (270)
                      +.+|++|+++|.
T Consensus       259 ~g~D~vid~~g~  270 (373)
T 2fzw_A          259 GGVDYSFECIGN  270 (373)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCCEEEECCCc
Confidence            579999999985

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.97  E-value=0.0044  Score=54.04  Aligned_cols=79  Identities=16%  Similarity=0.212  Sum_probs=53.9

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHcC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSS-RPQRQTLINTVSSLFN   96 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~   96 (270)
                      .|++|+|+|+ |++|..++......|+ +|+.+++++++.+.+    ++.|....   .|..+ .+++   .+++.+..+
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a----~~lGa~~v---i~~~~~~~~~---~~~i~~~t~  259 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKA----IELGATEC---LNPKDYDKPI---YEVICEKTN  259 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH----HHTTCSEE---ECGGGCSSCH---HHHHHHHTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH----HHcCCcEE---EecccccchH---HHHHHHHhC
Confidence            5789999995 9999999988888899 799999988876543    23454322   23322 1222   233333333


Q ss_pred             CcccEEEECCCC
Q 024230           97 GKLNIFVNNVGT  108 (270)
Q Consensus        97 ~~id~li~~ag~  108 (270)
                      +.+|++|.++|.
T Consensus       260 gg~Dvvid~~g~  271 (373)
T 1p0f_A          260 GGVDYAVECAGR  271 (373)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            579999999985

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.97  E-value=0.0034  Score=55.35  Aligned_cols=44  Identities=18%  Similarity=0.254  Sum_probs=39.4

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHH
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECI   61 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~   61 (270)
                      .+++.+|+|+|+ |.+|..+++.+...|++|++++++++.++.+.
T Consensus       187 ~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~  230 (405)
T 4dio_A          187 TVPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVA  230 (405)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            578899999999 79999999999999999999999998766543

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=96.97  E-value=0.0058  Score=53.24  Aligned_cols=78  Identities=14%  Similarity=0.280  Sum_probs=53.2

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      .|++|||+|+ |++|...+......|+ +|+.+++++++.+.+ ++   .|....   .|..+.+    ..+++.+..++
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a-~~---lGa~~v---i~~~~~~----~~~~~~~~~~g  257 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQ---LGATHV---INSKTQD----PVAAIKEITDG  257 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HH---HTCSEE---EETTTSC----HHHHHHHHTTS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HH---cCCCEE---ecCCccC----HHHHHHHhcCC
Confidence            5789999995 9999999988888899 699999988876543 22   343322   2333322    22333333335


Q ss_pred             cccEEEECCCC
Q 024230           98 KLNIFVNNVGT  108 (270)
Q Consensus        98 ~id~li~~ag~  108 (270)
                      .+|++|.++|.
T Consensus       258 g~D~vid~~g~  268 (371)
T 1f8f_A          258 GVNFALESTGS  268 (371)
T ss_dssp             CEEEEEECSCC
T ss_pred             CCcEEEECCCC
Confidence            79999999984

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=96.96  E-value=0.0023  Score=56.54  Aligned_cols=78  Identities=26%  Similarity=0.382  Sum_probs=55.1

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      .|.+|||+|+ |++|...+......|+ +|+.+++++++++.+ ++   .|....   .|-.+.+    +.+++.+..++
T Consensus       213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-~~---lGa~~v---i~~~~~~----~~~~i~~~t~g  280 (404)
T 3ip1_A          213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA-KE---LGADHV---IDPTKEN----FVEAVLDYTNG  280 (404)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HH---HTCSEE---ECTTTSC----HHHHHHHHTTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HH---cCCCEE---EcCCCCC----HHHHHHHHhCC
Confidence            6889999998 9999999999889999 899999988876543 33   343322   2443322    33344444433


Q ss_pred             -cccEEEECCCC
Q 024230           98 -KLNIFVNNVGT  108 (270)
Q Consensus        98 -~id~li~~ag~  108 (270)
                       .+|++|.++|.
T Consensus       281 ~g~D~vid~~g~  292 (404)
T 3ip1_A          281 LGAKLFLEATGV  292 (404)
T ss_dssp             CCCSEEEECSSC
T ss_pred             CCCCEEEECCCC
Confidence             69999999985

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=96.96  E-value=0.0058  Score=52.69  Aligned_cols=77  Identities=22%  Similarity=0.316  Sum_probs=53.1

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHC--CCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSML--GATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~--G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      .|++|||+|+ |++|..++......  |++|+.+++++++.+.+. +   .|....   .|..+.   .+.++++.+  +
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~-~---lGa~~v---i~~~~~---~~~~~~~~~--g  236 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL-E---LGADYV---SEMKDA---ESLINKLTD--G  236 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH-H---HTCSEE---ECHHHH---HHHHHHHHT--T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH-H---hCCCEE---eccccc---hHHHHHhhc--C
Confidence            7899999999 89999999988888  999999999988765432 2   343322   232220   122333322  1


Q ss_pred             CcccEEEECCCC
Q 024230           97 GKLNIFVNNVGT  108 (270)
Q Consensus        97 ~~id~li~~ag~  108 (270)
                      .++|++|.++|.
T Consensus       237 ~g~D~vid~~g~  248 (344)
T 2h6e_A          237 LGASIAIDLVGT  248 (344)
T ss_dssp             CCEEEEEESSCC
T ss_pred             CCccEEEECCCC
Confidence            379999999984

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.96  E-value=0.0007  Score=56.08  Aligned_cols=42  Identities=21%  Similarity=0.323  Sum_probs=37.0

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHH
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNEC   60 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~   60 (270)
                      +++| +++|.|+ ||.|++++..|++.|+ +|.+++|+.++.+++
T Consensus       106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~l  148 (253)
T 3u62_A          106 EVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKAL  148 (253)
T ss_dssp             CCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTC
T ss_pred             CCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence            5688 9999987 8999999999999998 899999998876554

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.96  E-value=0.0022  Score=55.98  Aligned_cols=74  Identities=18%  Similarity=0.235  Sum_probs=53.6

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      .|.+|||+|+ |++|..++......|++|+.+++++++.+.+. +   .|....   .|..+.+.+    +++   . +.
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~-~---lGa~~v---i~~~~~~~~----~~~---~-~g  257 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-A---LGADEV---VNSRNADEM----AAH---L-KS  257 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-H---HTCSEE---EETTCHHHH----HTT---T-TC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-H---cCCcEE---eccccHHHH----HHh---h-cC
Confidence            5899999997 89999999988889999999999988876443 2   343322   355554322    221   1 57


Q ss_pred             ccEEEECCCC
Q 024230           99 LNIFVNNVGT  108 (270)
Q Consensus        99 id~li~~ag~  108 (270)
                      +|++|.++|.
T Consensus       258 ~Dvvid~~g~  267 (369)
T 1uuf_A          258 FDFILNTVAA  267 (369)
T ss_dssp             EEEEEECCSS
T ss_pred             CCEEEECCCC
Confidence            9999999986

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.96  E-value=0.0036  Score=51.72  Aligned_cols=81  Identities=14%  Similarity=0.190  Sum_probs=57.0

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCCh-------------------hHHHHHHHHHHhc--CCeEEEE
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTE-------------------TELNECIHHLQMK--GLKVTGS   74 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~-------------------~~~~~~~~~~~~~--~~~~~~~   74 (270)
                      .|++++|+|.|+ ||+|..+++.|+..|. ++.+++++.                   .+.+.+.+.+.+.  ..++..+
T Consensus        25 ~l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~  103 (251)
T 1zud_1           25 KLLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTAL  103 (251)
T ss_dssp             HHHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence            578899999998 6799999999999997 688886643                   4556666666654  3455555


Q ss_pred             EccCCCHHHHHHHHHHHHHHcCCcccEEEECCC
Q 024230           75 VCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVG  107 (270)
Q Consensus        75 ~~D~~~~~~~~~~~~~i~~~~~~~id~li~~ag  107 (270)
                      ..+++ .+.+.+++        ...|++|++..
T Consensus       104 ~~~~~-~~~~~~~~--------~~~DvVi~~~d  127 (251)
T 1zud_1          104 QQRLT-GEALKDAV--------ARADVVLDCTD  127 (251)
T ss_dssp             CSCCC-HHHHHHHH--------HHCSEEEECCS
T ss_pred             eccCC-HHHHHHHH--------hcCCEEEECCC
Confidence            55554 34444443        35799999865

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.93  E-value=0.0014  Score=56.94  Aligned_cols=75  Identities=20%  Similarity=0.227  Sum_probs=53.5

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      .|++|+|+|+ |++|...+..+...|++|+.+++++++.+.+.+   +.|....   .|..+.+.+       .+.. +.
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~---~lGa~~v---i~~~~~~~~-------~~~~-~g  244 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQ---DLGADDY---VIGSDQAKM-------SELA-DS  244 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHT---TSCCSCE---EETTCHHHH-------HHST-TT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH---HcCCcee---eccccHHHH-------HHhc-CC
Confidence            7899999995 999999999888899999999998877654332   3343322   244443322       2222 57


Q ss_pred             ccEEEECCCC
Q 024230           99 LNIFVNNVGT  108 (270)
Q Consensus        99 id~li~~ag~  108 (270)
                      +|++|.++|.
T Consensus       245 ~D~vid~~g~  254 (357)
T 2cf5_A          245 LDYVIDTVPV  254 (357)
T ss_dssp             EEEEEECCCS
T ss_pred             CCEEEECCCC
Confidence            9999999985

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.91  E-value=0.0017  Score=55.53  Aligned_cols=74  Identities=18%  Similarity=0.245  Sum_probs=51.1

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      .|++|+|+||+|++|...+..+...|++|+.+++. ++. +..+   +.|....   .|..+.+.+.       +.. ..
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~-~~~-~~~~---~lGa~~~---i~~~~~~~~~-------~~~-~g  215 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASK-RNH-AFLK---ALGAEQC---INYHEEDFLL-------AIS-TP  215 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECH-HHH-HHHH---HHTCSEE---EETTTSCHHH-------HCC-SC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEecc-chH-HHHH---HcCCCEE---EeCCCcchhh-------hhc-cC
Confidence            68999999999999999999999999999988754 332 3333   3454422   2444433222       112 57


Q ss_pred             ccEEEECCCC
Q 024230           99 LNIFVNNVGT  108 (270)
Q Consensus        99 id~li~~ag~  108 (270)
                      +|+++.+.|.
T Consensus       216 ~D~v~d~~g~  225 (321)
T 3tqh_A          216 VDAVIDLVGG  225 (321)
T ss_dssp             EEEEEESSCH
T ss_pred             CCEEEECCCc
Confidence            9999999983

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=96.90  E-value=0.029  Score=47.38  Aligned_cols=112  Identities=11%  Similarity=-0.003  Sum_probs=68.1

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCC--eEEEeeCChhHHHHHHHHHHh----cCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTETELNECIHHLQM----KGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      +|.|+|+ |.+|.+++..|+..|.  +|++++++++.++....++..    ......+...  +|.    +.+       
T Consensus         2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~----~a~-------   67 (294)
T 1oju_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADY----SLL-------   67 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCG----GGG-------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CCH----HHh-------
Confidence            6899999 9999999999999998  899999999876533333322    1111121111  111    122       


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCc
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSA  158 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~  158 (270)
                       ..-|++|.++|.... +  ..+..+   .+..|+.-.    +.+.+.+.+.. ++.++++|-.
T Consensus        68 -~~aDiVViaag~~~k-p--G~~R~d---l~~~N~~i~----~~i~~~i~~~~p~a~iivvsNP  120 (294)
T 1oju_A           68 -KGSEIIVVTAGLARK-P--GMTRLD---LAHKNAGII----KDIAKKIVENAPESKILVVTNP  120 (294)
T ss_dssp             -TTCSEEEECCCCCCC-S--SCCHHH---HHHHHHHHH----HHHHHHHHTTSTTCEEEECSSS
T ss_pred             -CCCCEEEECCCCCCC-C--CCcHHH---HHHHHHHHH----HHHHHHHHhhCCCeEEEEeCCc
Confidence             568999999997532 1  234433   355665444    44444445543 4566666543

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.89  E-value=0.0017  Score=56.18  Aligned_cols=70  Identities=24%  Similarity=0.317  Sum_probs=52.3

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      .|++|||+|+ |++|...+......|++|+.+++++++.+.+    ++.|....+     .+.+.+.           ..
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~----~~lGa~~v~-----~~~~~~~-----------~~  234 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDA----LSMGVKHFY-----TDPKQCK-----------EE  234 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHH----HHTTCSEEE-----SSGGGCC-----------SC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH----HhcCCCeec-----CCHHHHh-----------cC
Confidence            6899999997 9999999999999999999999998877543    334544332     3332211           27


Q ss_pred             ccEEEECCCCC
Q 024230           99 LNIFVNNVGTS  109 (270)
Q Consensus        99 id~li~~ag~~  109 (270)
                      +|+++.++|..
T Consensus       235 ~D~vid~~g~~  245 (348)
T 3two_A          235 LDFIISTIPTH  245 (348)
T ss_dssp             EEEEEECCCSC
T ss_pred             CCEEEECCCcH
Confidence            99999999853

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.88  E-value=0.0023  Score=55.79  Aligned_cols=47  Identities=19%  Similarity=0.295  Sum_probs=41.8

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHH
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHL   64 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~   64 (270)
                      +|+||+|+|+|. |.+|..+|+.|.+.|++|++.+++.+.+++..++.
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~  216 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE  216 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            799999999997 88999999999999999999999988777666543

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=96.86  E-value=0.033  Score=47.71  Aligned_cols=115  Identities=15%  Similarity=-0.013  Sum_probs=71.3

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC--eEEEeeCChhHHHHHHHHHHhc---C-CeEEEEEccCCCHHHHHHHHHHHH
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTETELNECIHHLQMK---G-LKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~---~-~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      ..++|.|+|+ |.+|..+|..|+..|.  +|++++++++..+....++...   . ..-.....|..+            
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~------------   86 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV------------   86 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS------------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH------------
Confidence            4578999999 9999999999999997  8999999998776665555432   1 111111223321            


Q ss_pred             HHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCc
Q 024230           93 SLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSA  158 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~  158 (270)
                        + ...|++|.++|......   .+..   +.+..|+.-...+.+.+.++   ...+.++++|-.
T Consensus        87 --~-~daDiVIitaG~p~kpG---~tR~---dll~~N~~I~k~i~~~I~k~---~P~a~ilvvtNP  140 (330)
T 3ldh_A           87 --S-AGSKLVVITAGARQQEG---ESRL---NLVQRNVNIFKFIIPNIVKH---SPDCLKELHPEL  140 (330)
T ss_dssp             --C-SSCSEEEECCSCCCCSS---CCTT---GGGHHHHHHHHHHHHHHHHH---CTTCEEEECSSS
T ss_pred             --h-CCCCEEEEeCCCCCCCC---CCHH---HHHHhhHHHHHHHHHHHHhh---CCCceEEeCCCc
Confidence              2 57899999999853222   2221   23445554444444444332   234566666644

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=96.86  E-value=0.0024  Score=55.45  Aligned_cols=82  Identities=17%  Similarity=0.272  Sum_probs=50.9

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC--
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN--   96 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~--   96 (270)
                      .|++|||+|++|++|...+......|++++.+.+..+..++..+.+++.|....+   |-   .+..  .+++.+...  
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi---~~---~~~~--~~~~~~~~~~~  238 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVI---TE---EELR--RPEMKNFFKDM  238 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEE---EH---HHHH--SGGGGGTTSSS
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEE---ec---Ccch--HHHHHHHHhCC
Confidence            6899999999999999998888888999887766544322223334455544322   21   1100  112222221  


Q ss_pred             CcccEEEECCCC
Q 024230           97 GKLNIFVNNVGT  108 (270)
Q Consensus        97 ~~id~li~~ag~  108 (270)
                      +.+|++|.++|.
T Consensus       239 ~~~Dvvid~~g~  250 (357)
T 1zsy_A          239 PQPRLALNCVGG  250 (357)
T ss_dssp             CCCSEEEESSCH
T ss_pred             CCceEEEECCCc
Confidence            258999999873

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=96.82  E-value=0.033  Score=47.81  Aligned_cols=75  Identities=9%  Similarity=-0.009  Sum_probs=52.1

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhc----C--CeEEEEEccCCCHHHHHHHHHHHH
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMK----G--LKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~----~--~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      .++|.|+|+ |.+|.++|..|+..|+ +|++++++++.++.....+...    .  .++.. .   +|   +++.+    
T Consensus         9 ~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t---~d---~~ea~----   76 (331)
T 1pzg_A            9 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-E---YS---YEAAL----   76 (331)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-E---CS---HHHHH----
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-e---CC---HHHHh----
Confidence            358999998 9999999999999998 9999999988776643333321    1  12221 1   22   22223    


Q ss_pred             HHcCCcccEEEECCCCCC
Q 024230           93 SLFNGKLNIFVNNVGTSV  110 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~  110 (270)
                          ...|++|.++|...
T Consensus        77 ----~~aDiVi~a~g~p~   90 (331)
T 1pzg_A           77 ----TGADCVIVTAGLTK   90 (331)
T ss_dssp             ----TTCSEEEECCSCSS
T ss_pred             ----CCCCEEEEccCCCC
Confidence                56899999998743

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.82  E-value=0.0048  Score=54.24  Aligned_cols=44  Identities=20%  Similarity=0.190  Sum_probs=39.0

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNEC   60 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~   60 (270)
                      ..+.|++|+|+|+ |.+|..+++.+...|++|+++++++++.+..
T Consensus       168 ~~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~  211 (384)
T 1l7d_A          168 GTVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQV  211 (384)
T ss_dssp             EEECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHH
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            3679999999996 8999999999999999999999998776553

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.80  E-value=0.0024  Score=55.52  Aligned_cols=75  Identities=13%  Similarity=0.128  Sum_probs=52.6

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      .|++|||+|+ |++|..++..+...|++|+.+++++++.+.+. +   .|....   .|..+..+   ..+++.    ++
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~-~---lGa~~v---~~~~~~~~---~~~~~~----~~  243 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-K---MGADHY---IATLEEGD---WGEKYF----DT  243 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-H---HTCSEE---EEGGGTSC---HHHHSC----SC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-H---cCCCEE---EcCcCchH---HHHHhh----cC
Confidence            5899999999 99999999988889999999999888765433 2   343322   23322201   122221    47


Q ss_pred             ccEEEECCCC
Q 024230           99 LNIFVNNVGT  108 (270)
Q Consensus        99 id~li~~ag~  108 (270)
                      +|++|.++|.
T Consensus       244 ~D~vid~~g~  253 (360)
T 1piw_A          244 FDLIVVCASS  253 (360)
T ss_dssp             EEEEEECCSC
T ss_pred             CCEEEECCCC
Confidence            9999999986

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=96.78  E-value=0.022  Score=49.21  Aligned_cols=106  Identities=14%  Similarity=0.065  Sum_probs=64.7

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCC-------eEEEeeCChh--HHHHHHHHHHhcC--CeEEEEEccCCCHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGA-------TVHTCSRTET--ELNECIHHLQMKG--LKVTGSVCDVSSRPQR   84 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~-------~v~l~~r~~~--~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~   84 (270)
                      -++..-+|.|+||+|+||+.++..|++...       +++|++..+.  .++-...+++...  ........+  +.   
T Consensus        20 ~s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~--~~---   94 (345)
T 4h7p_A           20 GSMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTA--DP---   94 (345)
T ss_dssp             --CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEES--CH---
T ss_pred             CCCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcC--Ch---
Confidence            455667999999999999999999998643       6999998764  3344444555432  112222211  21   


Q ss_pred             HHHHHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHH
Q 024230           85 QTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLA  140 (270)
Q Consensus        85 ~~~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~  140 (270)
                      .+.       + ...|++|..||.... |  .++.++   .++.|..=.-.+.+.+
T Consensus        95 ~~a-------~-~~advVvi~aG~prk-p--GmtR~D---Ll~~Na~I~~~~~~~i  136 (345)
T 4h7p_A           95 RVA-------F-DGVAIAIMCGAFPRK-A--GMERKD---LLEMNARIFKEQGEAI  136 (345)
T ss_dssp             HHH-------T-TTCSEEEECCCCCCC-T--TCCHHH---HHHHHHHHHHHHHHHH
T ss_pred             HHH-------h-CCCCEEEECCCCCCC-C--CCCHHH---HHHHhHHHHHHHHHHH
Confidence            122       2 678999999998532 1  245544   4667765444444444

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=96.76  E-value=0.021  Score=48.87  Aligned_cols=116  Identities=9%  Similarity=0.056  Sum_probs=72.0

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhc----CCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMK----GLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      +.++|.|+| +|.+|.+++..|+..|. +|++++++++..+....++...    +....+...+  +.    +.+     
T Consensus         4 ~~~kI~iiG-aG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~--d~----~a~-----   71 (321)
T 3p7m_A            4 ARKKITLVG-AGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTN--DY----KDL-----   71 (321)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEES--CG----GGG-----
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcC--CH----HHH-----
Confidence            457899999 59999999999999998 9999999998776555555532    1111111111  11    122     


Q ss_pred             HcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCc
Q 024230           94 LFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSA  158 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~  158 (270)
                         ..-|++|.++|.... +  ..+..   +.+..|+.-...+.+.+..+   ...+.+++++-.
T Consensus        72 ---~~aDvVIi~ag~p~k-~--G~~R~---dl~~~N~~i~~~i~~~i~~~---~p~a~vivvtNP  124 (321)
T 3p7m_A           72 ---ENSDVVIVTAGVPRK-P--GMSRD---DLLGINIKVMQTVGEGIKHN---CPNAFVICITNP  124 (321)
T ss_dssp             ---TTCSEEEECCSCCCC-T--TCCHH---HHHHHHHHHHHHHHHHHHHH---CTTCEEEECCSS
T ss_pred             ---CCCCEEEEcCCcCCC-C--CCCHH---HHHHHhHHHHHHHHHHHHHH---CCCcEEEEecCc
Confidence               568999999997432 1  23433   34556666555555555332   124566666543

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=96.75  E-value=0.0068  Score=48.46  Aligned_cols=80  Identities=15%  Similarity=0.189  Sum_probs=52.8

Q ss_pred             cccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           13 QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        13 ~~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      -.+..++.++|.|.| .|.+|.+++..|++.|++|.+++|+++         .....++.++.+-   ...++++++++.
T Consensus        12 ~~~~~~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~---------~~~~aD~vi~av~---~~~~~~v~~~l~   78 (209)
T 2raf_A           12 HENLYFQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ---------ATTLGEIVIMAVP---YPALAALAKQYA   78 (209)
T ss_dssp             --------CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC---------CSSCCSEEEECSC---HHHHHHHHHHTH
T ss_pred             ccccccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH---------HhccCCEEEEcCC---cHHHHHHHHHHH
Confidence            346788999999999 799999999999999999999999876         1123445544443   667788888876


Q ss_pred             HHcCCcccEEEECCC
Q 024230           93 SLFNGKLNIFVNNVG  107 (270)
Q Consensus        93 ~~~~~~id~li~~ag  107 (270)
                      ..+ . =.+++++..
T Consensus        79 ~~~-~-~~~vi~~~~   91 (209)
T 2raf_A           79 TQL-K-GKIVVDITN   91 (209)
T ss_dssp             HHH-T-TSEEEECCC
T ss_pred             Hhc-C-CCEEEEECC
Confidence            665 2 235666543

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.73  E-value=0.0063  Score=53.61  Aligned_cols=79  Identities=16%  Similarity=0.272  Sum_probs=54.0

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      .|++|||+|+ |++|...+......|+ +|+.+++++++++.+    ++.|..  .  .|..+.+.+   .+++.+..++
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a----~~lGa~--~--i~~~~~~~~---~~~~~~~~~g  252 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLL----SDAGFE--T--IDLRNSAPL---RDQIDQILGK  252 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH----HTTTCE--E--EETTSSSCH---HHHHHHHHSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH----HHcCCc--E--EcCCCcchH---HHHHHHHhCC
Confidence            6899999996 9999999888888899 899999998876542    344543  2  344432211   1222222223


Q ss_pred             -cccEEEECCCCC
Q 024230           98 -KLNIFVNNVGTS  109 (270)
Q Consensus        98 -~id~li~~ag~~  109 (270)
                       .+|++|.++|..
T Consensus       253 ~g~Dvvid~~g~~  265 (398)
T 2dph_A          253 PEVDCGVDAVGFE  265 (398)
T ss_dssp             SCEEEEEECSCTT
T ss_pred             CCCCEEEECCCCc
Confidence             699999999863

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=96.72  E-value=0.0069  Score=52.17  Aligned_cols=77  Identities=21%  Similarity=0.247  Sum_probs=52.4

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHC-CCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC-
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSML-GATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN-   96 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~-G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~-   96 (270)
                      .|++++|+|+ |++|...+...... |++|+.+++++++.+.+    ++.|....+   |-.+  +   ..+++.+..+ 
T Consensus       171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~----~~lGa~~~i---~~~~--~---~~~~v~~~t~g  237 (345)
T 3jv7_A          171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALA----REVGADAAV---KSGA--G---AADAIRELTGG  237 (345)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHH----HHTTCSEEE---ECST--T---HHHHHHHHHGG
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH----HHcCCCEEE---cCCC--c---HHHHHHHHhCC
Confidence            5889999997 99999888777777 78999999998876543    334544322   2222  2   2233333332 


Q ss_pred             CcccEEEECCCC
Q 024230           97 GKLNIFVNNVGT  108 (270)
Q Consensus        97 ~~id~li~~ag~  108 (270)
                      ..+|+++.++|.
T Consensus       238 ~g~d~v~d~~G~  249 (345)
T 3jv7_A          238 QGATAVFDFVGA  249 (345)
T ss_dssp             GCEEEEEESSCC
T ss_pred             CCCeEEEECCCC
Confidence            379999999985

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=96.72  E-value=0.028  Score=47.93  Aligned_cols=114  Identities=11%  Similarity=0.063  Sum_probs=69.0

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCC--eEEEeeCChhHHHHHHHHHHhc----CCeEEEEEccCCCHHHHHHHHHHH
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTETELNECIHHLQMK----GLKVTGSVCDVSSRPQRQTLINTV   91 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~i   91 (270)
                      ++.++|.|+|+ |.+|.+++..|+.+|.  +|++++.++++++.....+...    +..+.+. .|  +.    +.    
T Consensus         4 m~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~-~~--~~----~a----   71 (317)
T 3d0o_A            4 FKGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVK-AG--EY----SD----   71 (317)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEE-EC--CG----GG----
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEE-eC--CH----HH----
Confidence            34578999998 9999999999999984  8999999987766544444321    1222222 22  11    11    


Q ss_pred             HHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecC
Q 024230           92 SSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSS  157 (270)
Q Consensus        92 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss  157 (270)
                         + ...|++|..+|.....   ..+..   +.+..|+.-...+.    +.+.+.. ++.++++|-
T Consensus        72 ---~-~~aDvVvi~ag~~~~~---g~~r~---dl~~~n~~i~~~i~----~~i~~~~p~a~viv~tN  124 (317)
T 3d0o_A           72 ---C-HDADLVVICAGAAQKP---GETRL---DLVSKNLKIFKSIV----GEVMASKFDGIFLVATN  124 (317)
T ss_dssp             ---G-TTCSEEEECCCCCCCT---TCCHH---HHHHHHHHHHHHHH----HHHHHTTCCSEEEECSS
T ss_pred             ---h-CCCCEEEECCCCCCCC---CCcHH---HHHHHHHHHHHHHH----HHHHHhCCCcEEEEecC
Confidence               2 5789999999874321   13333   33455555444444    4444443 456666543

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.72  E-value=0.006  Score=53.68  Aligned_cols=79  Identities=24%  Similarity=0.359  Sum_probs=54.4

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC-
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN-   96 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~-   96 (270)
                      .|++|+|+| +|++|...+......|+ +|+.+++++++++.+    ++.|..  .  .|.++.+.+   .+++.+..+ 
T Consensus       185 ~g~~VlV~G-aG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a----~~lGa~--~--i~~~~~~~~---~~~v~~~t~g  252 (398)
T 1kol_A          185 PGSTVYVAG-AGPVGLAAAASARLLGAAVVIVGDLNPARLAHA----KAQGFE--I--ADLSLDTPL---HEQIAALLGE  252 (398)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH----HHTTCE--E--EETTSSSCH---HHHHHHHHSS
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHH----HHcCCc--E--EccCCcchH---HHHHHHHhCC
Confidence            689999999 49999999988888999 689999988876543    334543  2  344433222   223333332 


Q ss_pred             CcccEEEECCCCC
Q 024230           97 GKLNIFVNNVGTS  109 (270)
Q Consensus        97 ~~id~li~~ag~~  109 (270)
                      ..+|++|.++|..
T Consensus       253 ~g~Dvvid~~G~~  265 (398)
T 1kol_A          253 PEVDCAVDAVGFE  265 (398)
T ss_dssp             SCEEEEEECCCTT
T ss_pred             CCCCEEEECCCCc
Confidence            3699999999864

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=96.72  E-value=0.024  Score=48.04  Aligned_cols=112  Identities=12%  Similarity=0.059  Sum_probs=63.8

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCC--eEEEeeCChhHHHHHHHHHHhcC---CeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTETELNECIHHLQMKG---LKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      ++|.|+|+ |.+|..++..|+..|.  +|++++++++.++.....+....   ....+. .  .+.+    .       +
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~-~--~~~~----a-------~   65 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVW-H--GGHS----E-------L   65 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEE-E--ECGG----G-------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEE-E--CCHH----H-------h
Confidence            37899998 9999999999999998  89999999887665444443221   111111 1  1211    1       2


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecC
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSS  157 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss  157 (270)
                       ...|++|.+++......   .+   -.+.+..|+.-...+.+.+.++   ...+.+++++-
T Consensus        66 -~~aDvVIi~~~~~~~~g---~~---r~dl~~~n~~i~~~i~~~i~~~---~p~~~vi~~tN  117 (304)
T 2v6b_A           66 -ADAQVVILTAGANQKPG---ES---RLDLLEKNADIFRELVPQITRA---APDAVLLVTSN  117 (304)
T ss_dssp             -TTCSEEEECC------------------CHHHHHHHHHHHHHHHHHH---CSSSEEEECSS
T ss_pred             -CCCCEEEEcCCCCCCCC---Cc---HHHHHHhHHHHHHHHHHHHHHh---CCCeEEEEecC
Confidence             57899999998643211   11   1234555665555555555443   22345555443

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=96.72  E-value=0.028  Score=47.05  Aligned_cols=84  Identities=11%  Similarity=0.049  Sum_probs=59.1

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCC---eEEEeeCChhHHHHHHHHHH--------h--cCCeEEEEEccCCCHHHHHH
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGA---TVHTCSRTETELNECIHHLQ--------M--KGLKVTGSVCDVSSRPQRQT   86 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~---~v~l~~r~~~~~~~~~~~~~--------~--~~~~~~~~~~D~~~~~~~~~   86 (270)
                      .++|.|.|+ |.+|.++++.|++.|+   +|++++|++++.+++.+...        +  ...++.++.+   .++.+.+
T Consensus         3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav---~p~~~~~   78 (280)
T 3tri_A            3 TSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV---KPHQIKM   78 (280)
T ss_dssp             CSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS---CGGGHHH
T ss_pred             CCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe---CHHHHHH
Confidence            467888887 8999999999999998   89999999998777654310        0  1234444433   4567788


Q ss_pred             HHHHHHHH-cCCcccEEEECCCC
Q 024230           87 LINTVSSL-FNGKLNIFVNNVGT  108 (270)
Q Consensus        87 ~~~~i~~~-~~~~id~li~~ag~  108 (270)
                      +++++... + .+=.++|.+++.
T Consensus        79 vl~~l~~~~l-~~~~iiiS~~ag  100 (280)
T 3tri_A           79 VCEELKDILS-ETKILVISLAVG  100 (280)
T ss_dssp             HHHHHHHHHH-TTTCEEEECCTT
T ss_pred             HHHHHHhhcc-CCCeEEEEecCC
Confidence            88888776 5 222377776543

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.71  E-value=0.0046  Score=54.87  Aligned_cols=73  Identities=12%  Similarity=0.104  Sum_probs=52.7

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      ..|+|.|. |.+|+.+++.|.++|+.|++++++++..+.+.    ..+  +.++..|.++++.++++=      . .+.|
T Consensus         5 ~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~----~~g--~~vi~GDat~~~~L~~ag------i-~~A~   70 (413)
T 3l9w_A            5 MRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLR----KFG--MKVFYGDATRMDLLESAG------A-AKAE   70 (413)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHH----HTT--CCCEESCTTCHHHHHHTT------T-TTCS
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH----hCC--CeEEEcCCCCHHHHHhcC------C-CccC
Confidence            46888886 88999999999999999999999998765543    333  334667887766554431      1 4566


Q ss_pred             EEEECCC
Q 024230          101 IFVNNVG  107 (270)
Q Consensus       101 ~li~~ag  107 (270)
                      .+|.+.+
T Consensus        71 ~viv~~~   77 (413)
T 3l9w_A           71 VLINAID   77 (413)
T ss_dssp             EEEECCS
T ss_pred             EEEECCC
Confidence            6666654

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.70  E-value=0.0034  Score=54.33  Aligned_cols=78  Identities=18%  Similarity=0.195  Sum_probs=53.8

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      .|++|+|+|+ |++|...+......|+ +|+.+++++++++.. ++   .|....   .|..+.+    +.+++.+..++
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~---lGa~~v---i~~~~~~----~~~~v~~~t~g  233 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIA-LE---YGATDI---INYKNGD----IVEQILKATDG  233 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHH-HH---HTCCEE---ECGGGSC----HHHHHHHHTTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HH---hCCceE---EcCCCcC----HHHHHHHHcCC
Confidence            5889999985 9999999998888999 799999988776433 32   343322   2333322    33444444433


Q ss_pred             -cccEEEECCCC
Q 024230           98 -KLNIFVNNVGT  108 (270)
Q Consensus        98 -~id~li~~ag~  108 (270)
                       .+|+++.++|.
T Consensus       234 ~g~D~v~d~~g~  245 (352)
T 3fpc_A          234 KGVDKVVIAGGD  245 (352)
T ss_dssp             CCEEEEEECSSC
T ss_pred             CCCCEEEECCCC
Confidence             69999999985

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=96.70  E-value=0.038  Score=47.03  Aligned_cols=117  Identities=15%  Similarity=0.099  Sum_probs=71.2

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHC-C--CeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           21 MTALVTGGTKGLGLAVVEELSML-G--ATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~-G--~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      .+|.|+||+|.+|.+++..|+.+ +  .+++++++++ ..+-...+++............-++.   .+.+        .
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v~~~~~~~~---~~~~--------~   68 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDA---TPAL--------E   68 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCSSEEEEEECSSCC---HHHH--------T
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCCCceEEEecCCCc---HHHh--------C
Confidence            36899999999999999999886 5  4799999987 33334444544322222211100111   1122        5


Q ss_pred             cccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCc
Q 024230           98 KLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSA  158 (270)
Q Consensus        98 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~  158 (270)
                      ..|++|.++|.... +  ..+.   .+.++.|+.-...+.+.+..+   ..++.+++++-.
T Consensus        69 ~aDivii~ag~~rk-p--G~~R---~dll~~N~~I~~~i~~~i~~~---~p~a~vlvvtNP  120 (312)
T 3hhp_A           69 GADVVLISAGVARK-P--GMDR---SDLFNVNAGIVKNLVQQVAKT---CPKACIGIITNP  120 (312)
T ss_dssp             TCSEEEECCSCSCC-T--TCCH---HHHHHHHHHHHHHHHHHHHHH---CTTSEEEECSSC
T ss_pred             CCCEEEEeCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHHHHH---CCCcEEEEecCc
Confidence            78999999997432 1  2344   345677776666666665443   234567776543

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.69  E-value=0.0021  Score=53.74  Aligned_cols=41  Identities=27%  Similarity=0.395  Sum_probs=37.1

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTE   54 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~   54 (270)
                      +..+++||+++|+|.++-+|+.+|..|+++|++|.++.|+.
T Consensus       154 ~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t  194 (285)
T 3p2o_A          154 YEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT  194 (285)
T ss_dssp             TTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             hCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc
Confidence            35689999999999999999999999999999999987653

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.66  E-value=0.0064  Score=52.71  Aligned_cols=76  Identities=14%  Similarity=0.165  Sum_probs=51.8

Q ss_pred             CCCCEEEEecCCCcHHHHH-HHHH-HHCCCe-EEEeeCChh---HHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Q 024230           18 LQGMTALVTGGTKGLGLAV-VEEL-SMLGAT-VHTCSRTET---ELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTV   91 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~l-a~~l-~~~G~~-v~l~~r~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i   91 (270)
                      +++++|+|+|+ |++|... +... ...|++ |+.++++++   +.+.+    ++.|...  +  |..++ ++.+ +.++
T Consensus       171 ~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~----~~lGa~~--v--~~~~~-~~~~-i~~~  239 (357)
T 2b5w_A          171 WDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDII----EELDATY--V--DSRQT-PVED-VPDV  239 (357)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHH----HHTTCEE--E--ETTTS-CGGG-HHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHH----HHcCCcc--c--CCCcc-CHHH-HHHh
Confidence            44589999999 9999998 7766 677997 999999887   65443    2345432  2  44432 2222 3332


Q ss_pred             HHHcCCcccEEEECCCC
Q 024230           92 SSLFNGKLNIFVNNVGT  108 (270)
Q Consensus        92 ~~~~~~~id~li~~ag~  108 (270)
                          .+.+|++|.++|.
T Consensus       240 ----~gg~Dvvid~~g~  252 (357)
T 2b5w_A          240 ----YEQMDFIYEATGF  252 (357)
T ss_dssp             ----SCCEEEEEECSCC
T ss_pred             ----CCCCCEEEECCCC
Confidence                2589999999984

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=96.66  E-value=0.0039  Score=55.97  Aligned_cols=82  Identities=22%  Similarity=0.228  Sum_probs=57.3

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .++++||+|+|.|. |+.|.++|+.|+++|++|.+.++++.......+.+++.|.++.  .....  ++   .       
T Consensus         4 ~~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~--~g~~~--~~---~-------   68 (451)
T 3lk7_A            4 ITTFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVV--CGSHP--LE---L-------   68 (451)
T ss_dssp             CCTTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEE--ESCCC--GG---G-------
T ss_pred             hhhcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEE--ECCCh--HH---h-------
Confidence            46789999999999 8899999999999999999999876432233445666665443  11111  10   1       


Q ss_pred             cCCcccEEEECCCCCCC
Q 024230           95 FNGKLNIFVNNVGTSVL  111 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~  111 (270)
                      +.+..|.+|...|+...
T Consensus        69 ~~~~~d~vv~spgi~~~   85 (451)
T 3lk7_A           69 LDEDFCYMIKNPGIPYN   85 (451)
T ss_dssp             GGSCEEEEEECTTSCTT
T ss_pred             hcCCCCEEEECCcCCCC
Confidence            11238999999998654

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=96.66  E-value=0.0092  Score=49.36  Aligned_cols=90  Identities=16%  Similarity=0.181  Sum_probs=57.4

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCe-EEEeeCChhHHHHHHHHHH--------hcCCeEEEEEccCCCHHHHHHH
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGAT-VHTCSRTETELNECIHHLQ--------MKGLKVTGSVCDVSSRPQRQTL   87 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~-v~l~~r~~~~~~~~~~~~~--------~~~~~~~~~~~D~~~~~~~~~~   87 (270)
                      ++++++|.|.|+ |.+|..+++.|++.|++ |.+++|+++..+++.+.+.        +.-.+..++..-+ ..+.+.++
T Consensus         7 ~~~~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av-~~~~~~~v   84 (266)
T 3d1l_A            7 SIEDTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSL-KDSAFAEL   84 (266)
T ss_dssp             CGGGCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECC-CHHHHHHH
T ss_pred             CCCCCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEec-CHHHHHHH
Confidence            344567999996 99999999999999998 8999999988776655421        0000111111112 23456777


Q ss_pred             HHHHHHHcCCcccEEEECCCCC
Q 024230           88 INTVSSLFNGKLNIFVNNVGTS  109 (270)
Q Consensus        88 ~~~i~~~~~~~id~li~~ag~~  109 (270)
                      ++++...+ .+=.+++++....
T Consensus        85 ~~~l~~~~-~~~~ivv~~s~~~  105 (266)
T 3d1l_A           85 LQGIVEGK-REEALMVHTAGSI  105 (266)
T ss_dssp             HHHHHTTC-CTTCEEEECCTTS
T ss_pred             HHHHHhhc-CCCcEEEECCCCC
Confidence            77776544 2334677776543

>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}

Probab=96.66  E-value=0.028  Score=48.78  Aligned_cols=49  Identities=18%  Similarity=0.140  Sum_probs=38.1

Q ss_pred             cccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHH
Q 024230           13 QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIH   62 (270)
Q Consensus        13 ~~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~   62 (270)
                      .+.|..+.++|.|.|+ |.+|.++|..|++.|++|.+++|+++..+.+.+
T Consensus        22 ~~~m~~~~mkI~VIGa-G~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~   70 (356)
T 3k96_A           22 SNAMEPFKHPIAILGA-GSWGTALALVLARKGQKVRLWSYESDHVDEMQA   70 (356)
T ss_dssp             -----CCCSCEEEECC-SHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHH
T ss_pred             hhcccccCCeEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence            3345555678999986 899999999999999999999999887766544

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.66  E-value=0.0072  Score=51.65  Aligned_cols=88  Identities=13%  Similarity=0.160  Sum_probs=58.5

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHH-------HHh--cCCeEEEEEccCCCHHHHHHH
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHH-------LQM--KGLKVTGSVCDVSSRPQRQTL   87 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~-------~~~--~~~~~~~~~~D~~~~~~~~~~   87 (270)
                      +.+.++|.|.|. |.+|..+|+.|++.|++|++++|++++.+++.+.       +.+  ...++  +..-+.+...++.+
T Consensus        28 ~~~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDv--Vi~~vp~~~~~~~v  104 (320)
T 4dll_A           28 DPYARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADI--VVSMLENGAVVQDV  104 (320)
T ss_dssp             -CCCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSE--EEECCSSHHHHHHH
T ss_pred             ccCCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCE--EEEECCCHHHHHHH
Confidence            345568999965 8999999999999999999999999887665431       111  12233  33445556677777


Q ss_pred             HH--HHHHHcCCcccEEEECCCC
Q 024230           88 IN--TVSSLFNGKLNIFVNNVGT  108 (270)
Q Consensus        88 ~~--~i~~~~~~~id~li~~ag~  108 (270)
                      +.  .+.... .+-.++|++...
T Consensus       105 ~~~~~~~~~l-~~~~~vi~~st~  126 (320)
T 4dll_A          105 LFAQGVAAAM-KPGSLFLDMASI  126 (320)
T ss_dssp             HTTTCHHHHC-CTTCEEEECSCC
T ss_pred             HcchhHHhhC-CCCCEEEecCCC
Confidence            75  555554 344566766543

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=96.63  E-value=0.0052  Score=51.91  Aligned_cols=85  Identities=6%  Similarity=-0.008  Sum_probs=58.1

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHH-------HHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHH-------LQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~-------~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      ++|.|.| .|.+|..+|+.|++.|++|++++|++++.+.+.+.       +.+.-. ..++..-+.+...++++++.+..
T Consensus        16 ~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~~~l~~   93 (296)
T 3qha_A           16 LKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVVGELAG   93 (296)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHHHHHHT
T ss_pred             CeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHHHHHHH
Confidence            5688887 58999999999999999999999998876654331       111011 23344555666777888877766


Q ss_pred             HcCCcccEEEECCCC
Q 024230           94 LFNGKLNIFVNNVGT  108 (270)
Q Consensus        94 ~~~~~id~li~~ag~  108 (270)
                      .. .+-.++|++...
T Consensus        94 ~l-~~g~ivv~~st~  107 (296)
T 3qha_A           94 HA-KPGTVIAIHSTI  107 (296)
T ss_dssp             TC-CTTCEEEECSCC
T ss_pred             hc-CCCCEEEEeCCC
Confidence            55 344567776543

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=96.59  E-value=0.013  Score=50.41  Aligned_cols=91  Identities=14%  Similarity=0.178  Sum_probs=58.2

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCCh-------------------hHHHHHHHHHHhcC--CeEEEE
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTE-------------------TELNECIHHLQMKG--LKVTGS   74 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~-------------------~~~~~~~~~~~~~~--~~~~~~   74 (270)
                      .|++++|+|.|+ ||+|..+++.|+..|. ++.+++++.                   .+.+.+.+.+.+..  .++..+
T Consensus        31 kL~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~  109 (340)
T 3rui_A           31 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  109 (340)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEE
Confidence            578899999987 7999999999999997 688887753                   44555666666543  445555


Q ss_pred             EccC-------CCHHHHHHHHHHHHHHcCCcccEEEECCCCC
Q 024230           75 VCDV-------SSRPQRQTLINTVSSLFNGKLNIFVNNVGTS  109 (270)
Q Consensus        75 ~~D~-------~~~~~~~~~~~~i~~~~~~~id~li~~ag~~  109 (270)
                      ..++       ++++....-.+.+.+.+ .+.|++|++....
T Consensus       110 ~~~i~~~g~~~~~~~~~~~~~~~l~~~l-~~~DlVvd~tDn~  150 (340)
T 3rui_A          110 KLSIPMIGHKLVNEEAQHKDFDRLRALI-KEHDIIFLLVDSR  150 (340)
T ss_dssp             CCCCCCTTSCCSCHHHHHHHHHHHHHHH-HHCSEEEECCSST
T ss_pred             eccccccCcccchhhhhcCCHHHHHhhh-ccCCEEEecCCCH
Confidence            5444       22111111111122223 4679999998753

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=96.54  E-value=0.021  Score=48.77  Aligned_cols=114  Identities=10%  Similarity=0.003  Sum_probs=66.4

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC--eEEEeeCChhHHHHHHHHHHhcC---CeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTETELNECIHHLQMKG---LKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      +.++|.|+|+ |.+|..++..|+..|.  +|+++|.++++++....++....   ..+.+. .  .+.           +
T Consensus         6 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~~-----------~   70 (318)
T 1y6j_A            6 SRSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-A--GDY-----------S   70 (318)
T ss_dssp             -CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CG-----------G
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-E--CCH-----------H
Confidence            3467999998 9999999999999997  89999999877655445554321   122111 1  111           1


Q ss_pred             HcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecC
Q 024230           94 LFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSS  157 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss  157 (270)
                      .+ ...|++|.++|.... +  ..+.   .+.+..|+.-...+.+.+.++   ..++.++++|-
T Consensus        71 a~-~~aDvVii~~g~p~k-~--g~~r---~dl~~~n~~i~~~i~~~i~~~---~p~a~viv~tN  124 (318)
T 1y6j_A           71 DV-KDCDVIVVTAGANRK-P--GETR---LDLAKKNVMIAKEVTQNIMKY---YNHGVILVVSN  124 (318)
T ss_dssp             GG-TTCSEEEECCCC---------CH---HHHHHHHHHHHHHHHHHHHHH---CCSCEEEECSS
T ss_pred             Hh-CCCCEEEEcCCCCCC-C--CcCH---HHHHHhhHHHHHHHHHHHHHh---CCCcEEEEecC
Confidence            12 578999999987431 1  1222   234666666666665555443   23456666543

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=96.53  E-value=0.03  Score=47.58  Aligned_cols=73  Identities=14%  Similarity=0.076  Sum_probs=50.9

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhc------CCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMK------GLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      ++|.|+|+ |.+|..++..|+..|. +|+++++++++++....++...      ..++.. ..|.       +.+     
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~-t~d~-------~a~-----   68 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTG-TNNY-------ADT-----   68 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEE-ESCG-------GGG-----
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEE-CCCH-------HHH-----
Confidence            58999998 9999999999999996 8999999988776555555431      112221 1121       112     


Q ss_pred             HcCCcccEEEECCCCCC
Q 024230           94 LFNGKLNIFVNNVGTSV  110 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~  110 (270)
                         ...|++|.++|...
T Consensus        69 ---~~aD~Vi~a~g~p~   82 (309)
T 1ur5_A           69 ---ANSDVIVVTSGAPR   82 (309)
T ss_dssp             ---TTCSEEEECCCC--
T ss_pred             ---CCCCEEEEcCCCCC
Confidence               57899999998743

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=96.50  E-value=0.0041  Score=52.03  Aligned_cols=41  Identities=32%  Similarity=0.374  Sum_probs=37.0

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTE   54 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~   54 (270)
                      +..+++||+++|.|.++-+|+.+|..|+.+|++|.++.++.
T Consensus       155 ~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T  195 (286)
T 4a5o_A          155 TGADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT  195 (286)
T ss_dssp             TTCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             hCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC
Confidence            35689999999999999999999999999999999987643

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.49  E-value=0.004  Score=56.11  Aligned_cols=74  Identities=12%  Similarity=0.109  Sum_probs=58.3

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      ++|+|.|+ |.+|..+|+.|.++|+.|++++++++..+++.+.+     .+..+..|-++++-++++=-       .+.|
T Consensus         4 M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-----~~~~i~Gd~~~~~~L~~Agi-------~~ad   70 (461)
T 4g65_A            4 MKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-----DLRVVNGHASHPDVLHEAGA-------QDAD   70 (461)
T ss_dssp             EEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-----SCEEEESCTTCHHHHHHHTT-------TTCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-----CcEEEEEcCCCHHHHHhcCC-------CcCC
Confidence            46778777 78999999999999999999999999887765443     36678899999877665421       4678


Q ss_pred             EEEECCC
Q 024230          101 IFVNNVG  107 (270)
Q Consensus       101 ~li~~ag  107 (270)
                      ++|-+.+
T Consensus        71 ~~ia~t~   77 (461)
T 4g65_A           71 MLVAVTN   77 (461)
T ss_dssp             EEEECCS
T ss_pred             EEEEEcC
Confidence            8887665

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.48  E-value=0.0079  Score=50.45  Aligned_cols=85  Identities=13%  Similarity=0.034  Sum_probs=56.7

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHH-------HHhcCCeEEEEEccCCCHHHHHHHH---HH
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHH-------LQMKGLKVTGSVCDVSSRPQRQTLI---NT   90 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~-------~~~~~~~~~~~~~D~~~~~~~~~~~---~~   90 (270)
                      ++|.|.|. |.+|..+++.|++.|++|++++|++++.+++.+.       +.+.-....++..-+.+...+++++   ++
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~   80 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHG   80 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcch
Confidence            57888875 8999999999999999999999998876655431       0000001123334455666777777   66


Q ss_pred             HHHHcCCcccEEEECCC
Q 024230           91 VSSLFNGKLNIFVNNVG  107 (270)
Q Consensus        91 i~~~~~~~id~li~~ag  107 (270)
                      +.... .+=.++|++..
T Consensus        81 l~~~l-~~~~~vi~~st   96 (287)
T 3pef_A           81 VLEGI-GEGRGYVDMST   96 (287)
T ss_dssp             HHHHC-CTTCEEEECSC
T ss_pred             HhhcC-CCCCEEEeCCC
Confidence            66655 34456777644

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.47  E-value=0.0017  Score=55.43  Aligned_cols=85  Identities=15%  Similarity=0.054  Sum_probs=56.5

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEE-EEEccCCCHHHHHHHHHHHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVT-GSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~i~   92 (270)
                      ...+++||+++|.|++.-+|+.+|+.|+..|++|.+++|+...+.....++   +...+ ......++++++.+.+    
T Consensus       171 ~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~l---a~~~~~~t~~~~t~~~~L~e~l----  243 (320)
T 1edz_A          171 EGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESL---KLNKHHVEDLGEYSEDLLKKCS----  243 (320)
T ss_dssp             TTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCS---SCCCCEEEEEEECCHHHHHHHH----
T ss_pred             cCCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHH---hhhcccccccccccHhHHHHHh----
Confidence            345899999999999988999999999999999999988744321111111   11111 1111113345665555    


Q ss_pred             HHcCCcccEEEECCCCC
Q 024230           93 SLFNGKLNIFVNNVGTS  109 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~  109 (270)
                          ..-|++|.++|..
T Consensus       244 ----~~ADIVIsAtg~p  256 (320)
T 1edz_A          244 ----LDSDVVITGVPSE  256 (320)
T ss_dssp             ----HHCSEEEECCCCT
T ss_pred             ----ccCCEEEECCCCC
Confidence                3579999999864

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.45  E-value=0.0048  Score=51.99  Aligned_cols=42  Identities=24%  Similarity=0.218  Sum_probs=37.6

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChh
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTET   55 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~   55 (270)
                      +..+++||+++|.|.++-+|+.+|..|+++|++|.++.|+..
T Consensus       159 ~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~  200 (300)
T 4a26_A          159 CGIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS  200 (300)
T ss_dssp             HTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC
T ss_pred             cCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC
Confidence            346899999999999999999999999999999999987443

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=96.44  E-value=0.005  Score=51.24  Aligned_cols=36  Identities=17%  Similarity=0.146  Sum_probs=34.2

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCC
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRT   53 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~   53 (270)
                      ++||+++|.|.++-+|+.+|..|+.+|++|.++.++
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~  183 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK  183 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence            999999999999999999999999999999998764

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.43  E-value=0.004  Score=52.09  Aligned_cols=75  Identities=24%  Similarity=0.309  Sum_probs=53.9

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      ..++++|+++|.|+ |++|+++++.|++.|++|.+++|++++.+++.+.+   +  +.  ..+  +.   .+.+      
T Consensus       124 ~~~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~---g--~~--~~~--~~---~~~~------  184 (275)
T 2hk9_A          124 IPEVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKF---P--LE--VVN--SP---EEVI------  184 (275)
T ss_dssp             CTTGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTS---C--EE--ECS--CG---GGTG------
T ss_pred             CCCcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHc---C--Ce--eeh--hH---Hhhh------
Confidence            35788999999996 79999999999999999999999988766543322   2  11  111  11   1111      


Q ss_pred             cCCcccEEEECCCCCC
Q 024230           95 FNGKLNIFVNNVGTSV  110 (270)
Q Consensus        95 ~~~~id~li~~ag~~~  110 (270)
                        ...|++|++.....
T Consensus       185 --~~aDiVi~atp~~~  198 (275)
T 2hk9_A          185 --DKVQVIVNTTSVGL  198 (275)
T ss_dssp             --GGCSEEEECSSTTS
T ss_pred             --cCCCEEEEeCCCCC
Confidence              46899999987643

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=96.43  E-value=0.067  Score=45.79  Aligned_cols=115  Identities=7%  Similarity=0.004  Sum_probs=70.7

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC--eEEEeeCChhHHHHHHHHHHhcC---CeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTETELNECIHHLQMKG---LKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      +.++|.|+|+ |.+|.+++..++..+.  +|+++++++++++....++....   ..+.+. .|  +.+    .+     
T Consensus         8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~~--~~~----a~-----   74 (326)
T 2zqz_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIY-SA--EYS----DA-----   74 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEE-EC--CGG----GG-----
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEE-EC--CHH----Hh-----
Confidence            4468999998 9999999999999886  79999999888776666564421   222222 22  111    12     


Q ss_pred             HcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCc
Q 024230           94 LFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSA  158 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~  158 (270)
                         ...|++|..+|.... +  ..+..   +.+..|+.-...+.+.+..+   ...+.++++|-.
T Consensus        75 ---~~aDvVii~ag~~~k-~--g~~R~---dl~~~n~~i~~~i~~~i~~~---~p~a~iiv~tNP  127 (326)
T 2zqz_A           75 ---KDADLVVITAGAPQK-P--GETRL---DLVNKNLKILKSIVDPIVDS---GFNGIFLVAANP  127 (326)
T ss_dssp             ---GGCSEEEECCCCC--------CHH---HHHHHHHHHHHHHHHHHHHH---TCCSEEEECSSS
T ss_pred             ---CCCCEEEEcCCCCCC-C--CCCHH---HHHHHHHHHHHHHHHHHHHH---CCCeEEEEeCCc
Confidence               578999999987432 1  12332   34555555444454444332   235677776543

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=96.41  E-value=0.0094  Score=51.74  Aligned_cols=83  Identities=13%  Similarity=0.186  Sum_probs=60.0

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCCh-------------------hHHHHHHHHHHhc--CCeEEE
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTE-------------------TELNECIHHLQMK--GLKVTG   73 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~-------------------~~~~~~~~~~~~~--~~~~~~   73 (270)
                      -.|++++|+|.|+ ||+|..+++.|+..|. ++.+++++.                   .+.+.+.+.+.+.  ..++..
T Consensus       114 ~~L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~  192 (353)
T 3h5n_A          114 DKLKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSE  192 (353)
T ss_dssp             HHHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEE
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEE
Confidence            3567899999987 8999999999999997 699998753                   2444555555554  356777


Q ss_pred             EEccCCCHHHHHHHHHHHHHHcCCcccEEEECCCC
Q 024230           74 SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGT  108 (270)
Q Consensus        74 ~~~D~~~~~~~~~~~~~i~~~~~~~id~li~~ag~  108 (270)
                      +..++++..++..        + .+.|++|.+...
T Consensus       193 ~~~~i~~~~~~~~--------~-~~~DlVvd~~Dn  218 (353)
T 3h5n_A          193 IALNINDYTDLHK--------V-PEADIWVVSADH  218 (353)
T ss_dssp             EECCCCSGGGGGG--------S-CCCSEEEECCCC
T ss_pred             eecccCchhhhhH--------h-ccCCEEEEecCC
Confidence            7777776543222        3 688999998753

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=96.40  E-value=0.0055  Score=51.31  Aligned_cols=41  Identities=24%  Similarity=0.316  Sum_probs=37.1

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTE   54 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~   54 (270)
                      +..+++||+++|.|++.-+|+.+|+.|+.+|++|.++.+..
T Consensus       153 ~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t  193 (288)
T 1b0a_A          153 YNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT  193 (288)
T ss_dssp             TTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC
T ss_pred             cCCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc
Confidence            45689999999999999999999999999999999987654

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=96.40  E-value=0.017  Score=48.20  Aligned_cols=164  Identities=10%  Similarity=0.108  Sum_probs=91.0

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHH-CCCeEE-EeeCChhHH--H-----------------HHHHHHHhcCCeEEEEEcc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSM-LGATVH-TCSRTETEL--N-----------------ECIHHLQMKGLKVTGSVCD   77 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~-~G~~v~-l~~r~~~~~--~-----------------~~~~~~~~~~~~~~~~~~D   77 (270)
                      +..+|+|+|++|.+|+.+++.+.+ .|++|+ +++++++..  +                 ++.+.+.  +.+   +..|
T Consensus         4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~--~~D---vVID   78 (273)
T 1dih_A            4 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKD--DFD---VFID   78 (273)
T ss_dssp             CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTT--SCS---EEEE
T ss_pred             CCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhc--CCC---EEEE
Confidence            345899999999999999998875 467765 566654320  0                 0111111  223   3458


Q ss_pred             CCCHHHHHHHHHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHH----------h----hHHHHHHHHHHHHH
Q 024230           78 VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMST----------N----FESAFHLCQLAHPL  143 (270)
Q Consensus        78 ~~~~~~~~~~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~----------n----~~~~~~l~~~~~~~  143 (270)
                      ++.++.....+..+.+   ..+++++-..|.         +.++.++..+.          |    +.-.+.+++.+.++
T Consensus        79 ft~p~~~~~~~~~a~~---~G~~vVigTtG~---------~~e~~~~L~~~a~~~~vv~a~N~siGvn~~~~l~~~aa~~  146 (273)
T 1dih_A           79 FTRPEGTLNHLAFCRQ---HGKGMVIGTTGF---------DEAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKV  146 (273)
T ss_dssp             CSCHHHHHHHHHHHHH---TTCEEEECCCCC---------CHHHHHHHHHHTTTSCEEECSCCCHHHHHHHHHHHHHHHH
T ss_pred             cCChHHHHHHHHHHHh---CCCCEEEECCCC---------CHHHHHHHHHhcCCCCEEEEecCcHHHHHHHHHHHHHHHh
Confidence            8888887777776665   356777767764         33332222211          1    11133444555555


Q ss_pred             HHhcCCcEEEEecCccccccCCCChhhhhhHHHHHHHHHHHHHHHc---------------cCCceEEEEecCccc
Q 024230          144 LRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWA---------------KDNIRTNSVAPWYIR  204 (270)
Q Consensus       144 m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal~~~~~sla~el~---------------~~~i~v~~v~pG~v~  204 (270)
                      +..  .-.+=.+=   .....+-..+||.++...+.+.+.+...+.               +.+|.+.++.-|-+-
T Consensus       147 ~~~--~~dieiiE---~Hh~~K~DaPSGTA~~~ae~i~~~~~~~~~~~~~~~r~~~~~~r~~~~i~i~s~R~g~vv  217 (273)
T 1dih_A          147 MGD--YTDIEIIE---AHHRHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIV  217 (273)
T ss_dssp             HTT--TSEEEEEE---EECTTCCSSSCHHHHHHHHHHHHHTTCCGGGTEECCCCSCCCSCCTTCEEEEEEECTTCC
T ss_pred             cCC--CCCEEEEE---eecCCCCCCCCHHHHHHHHHHHHhhCCCccccccccccCccCCCCCCcceEEEEeCCCCC
Confidence            431  11222211   122333345688888888877766543321               346888888755443

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=96.40  E-value=0.015  Score=49.07  Aligned_cols=82  Identities=12%  Similarity=0.101  Sum_probs=54.8

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      ..++|.|.||.|.+|.++++.|++.|++|.+++|+++..  ..+.+  ...++.++.+-.   ..+.++++++...+ .+
T Consensus        20 ~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~~--~~~~~--~~aDvVilavp~---~~~~~vl~~l~~~l-~~   91 (298)
T 2pv7_A           20 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAV--AESIL--ANADVVIVSVPI---NLTLETIERLKPYL-TE   91 (298)
T ss_dssp             TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGG--HHHHH--TTCSEEEECSCG---GGHHHHHHHHGGGC-CT
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcccC--HHHHh--cCCCEEEEeCCH---HHHHHHHHHHHhhc-CC
Confidence            346899999999999999999999999999999987631  11112  234565555433   23666777775544 22


Q ss_pred             ccEEEECCCC
Q 024230           99 LNIFVNNVGT  108 (270)
Q Consensus        99 id~li~~ag~  108 (270)
                      =.+++++++.
T Consensus        92 ~~iv~~~~sv  101 (298)
T 2pv7_A           92 NMLLADLTSV  101 (298)
T ss_dssp             TSEEEECCSC
T ss_pred             CcEEEECCCC
Confidence            2356665543

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=96.39  E-value=0.0087  Score=52.06  Aligned_cols=89  Identities=12%  Similarity=0.124  Sum_probs=54.9

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHH-----------HHhc-CCeEEEEEccCCCHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHH-----------LQMK-GLKVTGSVCDVSSRP   82 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~-----------~~~~-~~~~~~~~~D~~~~~   82 (270)
                      +..+++++|.|+| .|.+|..+|+.|++.|++|.+++|++++.+++.+.           +... ..++.++  -+.+. 
T Consensus        17 ~~Mm~~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~--~vp~~-   92 (358)
T 4e21_A           17 NLYFQSMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWL--MVPAA-   92 (358)
T ss_dssp             -----CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEE--CSCGG-
T ss_pred             hhhhcCCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEE--eCCHH-
Confidence            3446678999998 68999999999999999999999998876654321           1110 0133322  23333 


Q ss_pred             HHHHHHHHHHHHcCCcccEEEECCCC
Q 024230           83 QRQTLINTVSSLFNGKLNIFVNNVGT  108 (270)
Q Consensus        83 ~~~~~~~~i~~~~~~~id~li~~ag~  108 (270)
                      .++++++.+...+ .+=+++|++...
T Consensus        93 ~v~~vl~~l~~~l-~~g~iiId~st~  117 (358)
T 4e21_A           93 VVDSMLQRMTPLL-AANDIVIDGGNS  117 (358)
T ss_dssp             GHHHHHHHHGGGC-CTTCEEEECSSC
T ss_pred             HHHHHHHHHHhhC-CCCCEEEeCCCC
Confidence            5666666665554 344566666543

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=96.39  E-value=0.0096  Score=49.88  Aligned_cols=41  Identities=7%  Similarity=0.078  Sum_probs=37.1

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHH
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECI   61 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~   61 (270)
                      ++|.|.|++|.+|..+++.|++.|++|++++|+++..+.+.
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~   52 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQ   52 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence            58999999999999999999999999999999988776654

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=96.38  E-value=0.0045  Score=51.76  Aligned_cols=40  Identities=33%  Similarity=0.365  Sum_probs=36.3

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCC
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRT   53 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~   53 (270)
                      +..+++||+++|.|.++-+|+.+|..|..+|++|.++.|+
T Consensus       155 ~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~  194 (285)
T 3l07_A          155 YGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF  194 (285)
T ss_dssp             TTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             hCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            3468999999999999999999999999999999888764

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=96.36  E-value=0.033  Score=47.46  Aligned_cols=40  Identities=13%  Similarity=-0.046  Sum_probs=35.4

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHH
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNEC   60 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~   60 (270)
                      .++|.|+|+ |.+|..+|..|++.|. +|++++++++.++..
T Consensus         4 ~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~   44 (317)
T 2ewd_A            4 RRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGK   44 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHH
Confidence            368999998 9999999999999998 999999998776653

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=96.33  E-value=0.0044  Score=52.73  Aligned_cols=68  Identities=15%  Similarity=0.152  Sum_probs=47.4

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      .|++|||+|+ |++|...+......|++|+.++ ++++.+.+ ++   .|.... +  |  |.+       ++    ++.
T Consensus       142 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~-~~---lGa~~v-~--~--d~~-------~v----~~g  199 (315)
T 3goh_A          142 KQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALA-AK---RGVRHL-Y--R--EPS-------QV----TQK  199 (315)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHH-HH---HTEEEE-E--S--SGG-------GC----CSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHH-HH---cCCCEE-E--c--CHH-------Hh----CCC
Confidence            6899999999 9999999998888999999999 66665443 32   343322 2  2  211       11    378


Q ss_pred             ccEEEECCCC
Q 024230           99 LNIFVNNVGT  108 (270)
Q Consensus        99 id~li~~ag~  108 (270)
                      +|+++.+.|.
T Consensus       200 ~Dvv~d~~g~  209 (315)
T 3goh_A          200 YFAIFDAVNS  209 (315)
T ss_dssp             EEEEECC---
T ss_pred             ccEEEECCCc
Confidence            9999999985

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=96.33  E-value=0.066  Score=45.59  Aligned_cols=112  Identities=11%  Similarity=0.101  Sum_probs=66.9

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCC--eEEEeeCChhHHHHHHHHHHhc----CCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTETELNECIHHLQMK----GLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      +|.|+|+ |.+|.+++..|+..|.  +|+++++++++.+....+++..    .........|..             +.+
T Consensus         2 kv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~~-------------~a~   67 (314)
T 3nep_X            2 KVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTNDY-------------GPT   67 (314)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESSS-------------GGG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCCH-------------HHh
Confidence            6889996 9999999999999997  8999999998766544444431    112222212221             112


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCc
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSA  158 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~  158 (270)
                       ..-|++|.++|.... +  ..+   -.+.+..|+.-...+    .+.+.+.. .+.++++|-.
T Consensus        68 -~~aDvVii~ag~~~k-p--G~~---R~dl~~~N~~i~~~i----~~~i~~~~p~a~vivvtNP  120 (314)
T 3nep_X           68 -EDSDVCIITAGLPRS-P--GMS---RDDLLAKNTEIVGGV----TEQFVEGSPDSTIIVVANP  120 (314)
T ss_dssp             -TTCSEEEECCCC-------------CHHHHHHHHHHHHHH----HHHHHTTCTTCEEEECCSS
T ss_pred             -CCCCEEEECCCCCCC-C--CCC---HHHHHHhhHHHHHHH----HHHHHHhCCCcEEEecCCc
Confidence             578999999997432 1  112   234456666544444    44445443 4566666543

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=96.32  E-value=0.0081  Score=49.77  Aligned_cols=71  Identities=27%  Similarity=0.325  Sum_probs=53.1

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      ..+++| +++|.|+ |++|+++++.|.+.|++|.+++|+.++.+++.+.+   +..     .  .+.+       ++   
T Consensus       112 ~~~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~---~~~-----~--~~~~-------~~---  169 (263)
T 2d5c_A          112 GIPLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEF---GLR-----A--VPLE-------KA---  169 (263)
T ss_dssp             TCCCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH---TCE-----E--CCGG-------GG---
T ss_pred             CCCCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---ccc-----h--hhHh-------hc---
Confidence            357889 9999996 77999999999999999999999988777665544   221     1  1211       11   


Q ss_pred             cCCcccEEEECCCCC
Q 024230           95 FNGKLNIFVNNVGTS  109 (270)
Q Consensus        95 ~~~~id~li~~ag~~  109 (270)
                        ...|++|++....
T Consensus       170 --~~~Divi~~tp~~  182 (263)
T 2d5c_A          170 --REARLLVNATRVG  182 (263)
T ss_dssp             --GGCSEEEECSSTT
T ss_pred             --cCCCEEEEccCCC
Confidence              2579999998765

>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2

Probab=96.32  E-value=0.055  Score=48.76  Aligned_cols=79  Identities=6%  Similarity=0.106  Sum_probs=52.3

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHC-----CCeEEEeeCChhHHHHHHHHHHh----cCCeEEEEEccCCCHHHHHHHH
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSML-----GATVHTCSRTETELNECIHHLQM----KGLKVTGSVCDVSSRPQRQTLI   88 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~-----G~~v~l~~r~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~   88 (270)
                      ++.++|.|.||++..|.+++..|+.+     +.+|++++++++.++...+..+.    .+....+...  +|   .++++
T Consensus        26 m~~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t--~D---~~eal  100 (472)
T 1u8x_X           26 KKSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT--TD---PEEAF  100 (472)
T ss_dssp             CCCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE--SC---HHHHH
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEEE--CC---HHHHH
Confidence            34568999999988888899999998     66899999999887664332221    1222111111  12   22233


Q ss_pred             HHHHHHcCCcccEEEECCCCC
Q 024230           89 NTVSSLFNGKLNIFVNNVGTS  109 (270)
Q Consensus        89 ~~i~~~~~~~id~li~~ag~~  109 (270)
                              ..-|++|..++..
T Consensus       101 --------~~AD~VViaag~~  113 (472)
T 1u8x_X          101 --------TDVDFVMAHIRVG  113 (472)
T ss_dssp             --------SSCSEEEECCCTT
T ss_pred             --------cCCCEEEEcCCCc
Confidence                    5789999999874

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=96.31  E-value=0.052  Score=46.28  Aligned_cols=112  Identities=7%  Similarity=-0.007  Sum_probs=67.4

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCC--eEEEeeCChhHHHHHHHHHHhcC---CeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTETELNECIHHLQMKG---LKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      ++|.|+|+ |.+|.+++..++..+.  +|+++++++++++....++....   ..+.+. .|  +.+    .       +
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~-~~--~~~----a-------~   70 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIY-SG--EYS----D-------C   70 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEE-EC--CGG----G-------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEE-EC--CHH----H-------h
Confidence            58999998 9999999999999986  79999999888876666665431   222222 22  111    1       2


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEecCc
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRAS-GAASIVLMSSA  158 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~ii~iss~  158 (270)
                       ...|++|..+|......   .+.   .+.+..|+.-...+    .+.+.+. ..+.++++|-.
T Consensus        71 -~~aDvVii~ag~~~~~g---~~R---~dl~~~n~~i~~~i----~~~i~~~~p~a~iiv~tNP  123 (318)
T 1ez4_A           71 -KDADLVVITAGAPQKPG---ESR---LDLVNKNLNILSSI----VKPVVDSGFDGIFLVAANP  123 (318)
T ss_dssp             -TTCSEEEECCCC----------------CHHHHHHHHHHH----HHHHHHTTCCSEEEECSSS
T ss_pred             -CCCCEEEECCCCCCCCC---CCH---HHHHHHHHHHHHHH----HHHHHHhCCCeEEEEeCCc
Confidence             57899999998743211   111   22344454444444    4444444 35667776443

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=96.29  E-value=0.087  Score=44.68  Aligned_cols=113  Identities=11%  Similarity=0.027  Sum_probs=69.1

Q ss_pred             EEEEecCCCcHHHHHHHHHHHC--CCeEEEeeCChhHHHHHHHHHHhc----CCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           22 TALVTGGTKGLGLAVVEELSML--GATVHTCSRTETELNECIHHLQMK----GLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~--G~~v~l~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      +|.|+|+ |.+|..++..|++.  |.+|++++++++.++....++...    .....+...  ++.+   +        +
T Consensus         2 kI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d~~---~--------l   67 (310)
T 1guz_A            2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYA---D--------T   67 (310)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGG---G--------G
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEEC--CCHH---H--------H
Confidence            6889998 99999999999996  789999999988776554333321    111111110  1211   1        2


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCc
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSA  158 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~  158 (270)
                       ...|++|.+++.... +  ..+.   .+.+..|+.-...+.+.+.++   ...+.+++++-.
T Consensus        68 -~~aDvViiav~~p~~-~--g~~r---~dl~~~n~~i~~~i~~~i~~~---~~~~~viv~tNP  120 (310)
T 1guz_A           68 -ANSDIVIITAGLPRK-P--GMTR---EDLLMKNAGIVKEVTDNIMKH---SKNPIIIVVSNP  120 (310)
T ss_dssp             -TTCSEEEECCSCCCC-T--TCCH---HHHHHHHHHHHHHHHHHHHHH---CSSCEEEECCSS
T ss_pred             -CCCCEEEEeCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCcEEEEEcCc
Confidence             578999999986321 1  1222   245566666666666666554   134566766543

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=96.25  E-value=0.012  Score=49.63  Aligned_cols=40  Identities=25%  Similarity=0.284  Sum_probs=36.0

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHH
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECI   61 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~   61 (270)
                      ++|.|.|+ |.+|..+|..|++.|++|++++|+++..++..
T Consensus        16 ~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~   55 (302)
T 1f0y_A           16 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSK   55 (302)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHH
Confidence            68999988 89999999999999999999999998876643

>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}

Probab=96.22  E-value=0.046  Score=49.45  Aligned_cols=43  Identities=21%  Similarity=0.221  Sum_probs=36.7

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHH
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHH   63 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~   63 (270)
                      -++|.|.|+ |.+|..+|..|++.|++|++++++++.+++..+.
T Consensus         5 ~~kVgVIGa-G~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~   47 (483)
T 3mog_A            5 VQTVAVIGS-GTMGAGIAEVAASHGHQVLLYDISAEALTRAIDG   47 (483)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHH
Confidence            456777766 8999999999999999999999999988776553

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=96.21  E-value=0.024  Score=52.38  Aligned_cols=90  Identities=14%  Similarity=0.181  Sum_probs=59.3

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCCh-------------------hHHHHHHHHHHhcC--CeEEEE
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTE-------------------TELNECIHHLQMKG--LKVTGS   74 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~-------------------~~~~~~~~~~~~~~--~~~~~~   74 (270)
                      .|++++|+|.|+ ||+|..+|+.|+..|. ++.++|++.                   .+.+.+.+.+++..  .++..+
T Consensus       323 kL~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~  401 (615)
T 4gsl_A          323 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  401 (615)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEEe
Confidence            578899999987 6999999999999997 699988754                   45556666666653  455555


Q ss_pred             EccC-------CCHHHHHHHHHHHHHHcCCcccEEEECCCC
Q 024230           75 VCDV-------SSRPQRQTLINTVSSLFNGKLNIFVNNVGT  108 (270)
Q Consensus        75 ~~D~-------~~~~~~~~~~~~i~~~~~~~id~li~~ag~  108 (270)
                      ..++       ++++....-.+.+.+.+ ...|++|+|...
T Consensus       402 ~~~Ipm~gh~v~~e~~~~l~~~~l~~ll-~~~DlVvd~tDn  441 (615)
T 4gsl_A          402 KLSIPMIGHKLVNEEAQHKDFDRLRALI-KEHDIIFLLVDS  441 (615)
T ss_dssp             CCCCCCTTCCCSCHHHHHHHHHHHHHHH-HHCSEEEECCSS
T ss_pred             eccccccCccccchhhhcCCHHHHHHHh-hcCCEEEecCCC
Confidence            5444       22211111112222233 468999999865

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=96.21  E-value=0.0063  Score=51.27  Aligned_cols=40  Identities=30%  Similarity=0.375  Sum_probs=36.4

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCC
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRT   53 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~   53 (270)
                      +..+++||+++|.|++.-+|+.+|+.|+.+|++|.++.+.
T Consensus       159 ~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~  198 (301)
T 1a4i_A          159 TGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK  198 (301)
T ss_dssp             TTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             cCCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC
Confidence            3568999999999999999999999999999999998754

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=96.20  E-value=0.12  Score=43.96  Aligned_cols=75  Identities=15%  Similarity=0.072  Sum_probs=51.8

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCC--eEEEeeCChhHHHHHHHHHHhcCC----eEEEEEccCCCHHHHHHHHHHHHH
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTETELNECIHHLQMKGL----KVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      .++|.|+|+ |.+|.+++..++..|.  +|++++++++.++.....+.....    .+.+. .|  +.    +.      
T Consensus         6 ~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~-~~--~~----~a------   71 (316)
T 1ldn_A            6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIW-HG--DY----DD------   71 (316)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEE-EC--CG----GG------
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEE-cC--cH----HH------
Confidence            368999998 9999999999999885  799999998766554444443211    22222 11  11    11      


Q ss_pred             HcCCcccEEEECCCCCC
Q 024230           94 LFNGKLNIFVNNVGTSV  110 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~  110 (270)
                       + ...|++|.+++...
T Consensus        72 -l-~~aDvViia~~~~~   86 (316)
T 1ldn_A           72 -C-RDADLVVICAGANQ   86 (316)
T ss_dssp             -T-TTCSEEEECCSCCC
T ss_pred             -h-CCCCEEEEcCCCCC
Confidence             2 57899999998854

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=96.18  E-value=0.023  Score=48.85  Aligned_cols=79  Identities=18%  Similarity=0.215  Sum_probs=51.3

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHC-CCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSML-GATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~-G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      -.|.+|+|+|+ |++|...+..++.. |++|+.+++++++++.    +.+.+....+   |-.+.+-    .+++.+..+
T Consensus       162 ~~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~----~~~~Ga~~~i---~~~~~~~----~~~v~~~t~  229 (348)
T 4eez_A          162 KPGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNL----AKKIGADVTI---NSGDVNP----VDEIKKITG  229 (348)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHH----HHHTTCSEEE---EC-CCCH----HHHHHHHTT
T ss_pred             CCCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhh----hhhcCCeEEE---eCCCCCH----HHHhhhhcC
Confidence            36889999987 78888888777766 6899999999887643    2334544332   3343332    233444333


Q ss_pred             C-cccEEEECCCC
Q 024230           97 G-KLNIFVNNVGT  108 (270)
Q Consensus        97 ~-~id~li~~ag~  108 (270)
                      + .+|.++.+++.
T Consensus       230 g~g~d~~~~~~~~  242 (348)
T 4eez_A          230 GLGVQSAIVCAVA  242 (348)
T ss_dssp             SSCEEEEEECCSC
T ss_pred             CCCceEEEEeccC
Confidence            3 58889988874

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=96.14  E-value=0.2  Score=42.58  Aligned_cols=113  Identities=8%  Similarity=0.025  Sum_probs=67.8

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCC--eEEEeeCChhHHHHHHHHHHhc---CCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTETELNECIHHLQMK---GLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      ++|.|+|+ |.+|..++..|++.|.  +|++++++++.++.....+...   .....+. .  ++.+    .+       
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~-~--~d~~----~~-------   65 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIY-A--GDYA----DL-------   65 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEE-E--CCGG----GG-------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEE-e--CCHH----Hh-------
Confidence            36889998 9999999999999998  9999999988777655444321   0111111 1  2211    12       


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCc
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSA  158 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~  158 (270)
                       ...|++|.+++.....   ..+..   +.+..|+--...+.+.+.++   ...+.+|+++-.
T Consensus        66 -~~aDvViiav~~~~~~---g~~r~---dl~~~n~~i~~~i~~~i~~~---~~~~~ii~~tNp  118 (319)
T 1a5z_A           66 -KGSDVVIVAAGVPQKP---GETRL---QLLGRNARVMKEIARNVSKY---APDSIVIVVTNP  118 (319)
T ss_dssp             -TTCSEEEECCCCCCCS---SCCHH---HHHHHHHHHHHHHHHHHHHH---CTTCEEEECSSS
T ss_pred             -CCCCEEEEccCCCCCC---CCCHH---HHHHHHHHHHHHHHHHHHhh---CCCeEEEEeCCc
Confidence             5689999999875421   12222   23445555444555544433   224556665443

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=96.09  E-value=0.0086  Score=49.07  Aligned_cols=44  Identities=27%  Similarity=0.372  Sum_probs=34.0

Q ss_pred             ccccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhH
Q 024230           12 RQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETE   56 (270)
Q Consensus        12 ~~~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~   56 (270)
                      .....++.+++|.|.| .|.+|.++|+.|++.|++|.+++|+++.
T Consensus        11 ~~~~~~~~~~kIgiIG-~G~mG~alA~~L~~~G~~V~~~~r~~~~   54 (245)
T 3dtt_A           11 HHENLYFQGMKIAVLG-TGTVGRTMAGALADLGHEVTIGTRDPKA   54 (245)
T ss_dssp             --------CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred             cccccccCCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence            3445688999999996 8999999999999999999999999886

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=96.08  E-value=0.024  Score=48.03  Aligned_cols=89  Identities=10%  Similarity=0.062  Sum_probs=55.9

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHH-------HhcCCeEEEEEccCCCHHHHHHHHH
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHL-------QMKGLKVTGSVCDVSSRPQRQTLIN   89 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~-------~~~~~~~~~~~~D~~~~~~~~~~~~   89 (270)
                      +++.++|.|.| .|.+|..+|+.|++.|++|++++|++++.+++.+.-       .+.-.+..++..-+.+...++.++.
T Consensus         6 ~~~~~~IgiIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~   84 (306)
T 3l6d_A            6 ESFEFDVSVIG-LGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHLCESVKAALSASPATIFVLLDNHATHEVLG   84 (306)
T ss_dssp             CCCSCSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEECSSHHHHHHHSSEEEECCSSHHHHHHHHT
T ss_pred             ccCCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEeCCHHHHHHHhc
Confidence            34556788886 689999999999999999999999998876654320       0000011233344455556666664


Q ss_pred             --HHHHHcCCcccEEEECCCC
Q 024230           90 --TVSSLFNGKLNIFVNNVGT  108 (270)
Q Consensus        90 --~i~~~~~~~id~li~~ag~  108 (270)
                        .+...  .+=.++|++...
T Consensus        85 ~~~l~~~--~~g~ivid~st~  103 (306)
T 3l6d_A           85 MPGVARA--LAHRTIVDYTTN  103 (306)
T ss_dssp             STTHHHH--TTTCEEEECCCC
T ss_pred             ccchhhc--cCCCEEEECCCC
Confidence              44332  234566666543

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=96.07  E-value=0.11  Score=43.87  Aligned_cols=111  Identities=11%  Similarity=-0.015  Sum_probs=68.8

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCC--eEEEeeCChhHHHHHHHHHHh----cCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTETELNECIHHLQM----KGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      +|.|+|+ |+||.++|..|+.++.  +++|+|.+++..+-...++..    ..........+  |.+    .       +
T Consensus         2 KV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~--d~~----~-------~   67 (294)
T 2x0j_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA--DYS----L-------L   67 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEES--CGG----G-------G
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCC--CHH----H-------h
Confidence            6888995 9999999999999885  699999998776555555544    12222222221  111    1       2


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecC
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSS  157 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss  157 (270)
                       ..-|++|..||.... |  .++..+   .++.|..=    ++.+.+.+.+.. ++.++++|-
T Consensus        68 -~~aDvVvitAG~prk-p--GmtR~d---Ll~~Na~I----~~~i~~~i~~~~p~aivlvvsN  119 (294)
T 2x0j_A           68 -KGSEIIVVTAGLARK-P--GMTRLD---LAHKNAGI----IKDIAKKIVENAPESKILVVTN  119 (294)
T ss_dssp             -TTCSEEEECCCCCCC-S--SSCHHH---HHHHHHHH----HHHHHHHHHTTSTTCEEEECSS
T ss_pred             -CCCCEEEEecCCCCC-C--CCchHH---HHHHHHHH----HHHHHHHHHhcCCceEEEEecC
Confidence             568999999997532 1  245544   46667654    444455555554 345555544

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=96.07  E-value=0.11  Score=44.08  Aligned_cols=112  Identities=13%  Similarity=0.043  Sum_probs=70.5

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCC--CeEEEeeCChhHHHHHHHHHHhcC---CeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLG--ATVHTCSRTETELNECIHHLQMKG---LKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G--~~v~l~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      ++|.|+|+ |.+|.+++..++..+  .+|+++++++++++....++....   ..+.+. .+  +.+    .+       
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~-~~--~~~----a~-------   65 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVW-AG--SYG----DL-------   65 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEE-EC--CGG----GG-------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEE-EC--CHH----Hh-------
Confidence            47899998 999999999999998  589999999888776566665421   122222 12  211    12       


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEecCc
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRAS-GAASIVLMSSA  158 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~ii~iss~  158 (270)
                       ..-|++|..+|.....   ..+..   +.+..|+.-...+.+.+    .+. ..+.++++|-.
T Consensus        66 -~~aD~Vii~ag~~~~~---g~~r~---dl~~~n~~i~~~i~~~i----~~~~p~a~iiv~tNP  118 (310)
T 2xxj_A           66 -EGARAVVLAAGVAQRP---GETRL---QLLDRNAQVFAQVVPRV----LEAAPEAVLLVATNP  118 (310)
T ss_dssp             -TTEEEEEECCCCCCCT---TCCHH---HHHHHHHHHHHHHHHHH----HHHCTTCEEEECSSS
T ss_pred             -CCCCEEEECCCCCCCC---CcCHH---HHHHhhHHHHHHHHHHH----HHHCCCcEEEEecCc
Confidence             5789999999874321   23333   33555555444444444    433 34677776543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	270
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	4e-86
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	1e-82
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	8e-76
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	4e-73
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	2e-72
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	2e-68
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	2e-67
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	2e-67
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	8e-67
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	1e-65
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	3e-65
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	2e-64
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	8e-64
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	8e-64
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	9e-64
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-63
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	1e-63
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	7e-63
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	3e-62
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	4e-62
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	2e-61
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	3e-61
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	4e-61
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	9e-61
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	2e-59
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	1e-58
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	1e-58
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	1e-58
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	3e-58
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	9e-58
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	1e-57
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	5e-57
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	8e-57
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	1e-56
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	2e-56
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	2e-56
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-56
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	6e-56
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	3e-55
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-53
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	1e-53
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	4e-53
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	3e-52
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	5e-51
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	2e-50
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	3e-49
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	6e-48
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	1e-46
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	6e-46
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	7e-45
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	6e-44
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	2e-41
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	4e-40
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	1e-39
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	4e-39
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	8e-38
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	2e-37
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	9e-36
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	7e-35
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-34
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-32
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	1e-30
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	1e-27
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	2e-26
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	8e-22
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	8e-15
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	1e-12
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	1e-11
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	0.003
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	0.003
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	0.004

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  255 bits (652), Expect = 4e-86
 Identities = 164/255 (64%), Positives = 200/255 (78%), Gaps = 1/255 (0%)

Query: 15  RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGS 74
           RWSL+  T LVTGGTKG+G A+VEE +  GA +HTC+R E ELNEC+   Q KG +VTGS
Sbjct: 3   RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGS 62

Query: 75  VCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAF 134
           VCD S RP+R+ L+ TVSS+F GKL+I +NN+G    KPTL+Y AEDFS  +STN ESA+
Sbjct: 63  VCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAY 122

Query: 135 HLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIR 194
           HL QLAHPLL+ASG  +I+ MSS  G+VSA+VG++YSATKGA+NQLA+NLACEWA D IR
Sbjct: 123 HLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIR 182

Query: 195 TNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ 254
            N+VAP  I TP  E +  + +F   V SR P+GR GEP+EVSSLVAFLCMPAASYITGQ
Sbjct: 183 ANAVAPAVIATPLAEAVYDD-EFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYITGQ 241

Query: 255 TVCIDGGFTVNGFFF 269
           T+C+DGG TVNGF +
Sbjct: 242 TICVDGGLTVNGFSY 256

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score =  246 bits (630), Expect = 1e-82
 Identities = 133/257 (51%), Positives = 182/257 (70%), Gaps = 4/257 (1%)

Query: 15  RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGS 74
           RW+L+G TALVTGG++G+G  +VEEL+ LGA+V+TCSR + ELN+C+   + KG KV  S
Sbjct: 3   RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEAS 62

Query: 75  VCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAF 134
           VCD+SSR +RQ L+NTV++ F+GKLNI VNN G  + K   +Y  ED+SL+MS NFE+A+
Sbjct: 63  VCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAY 122

Query: 135 HLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIR 194
           HL  LAHP L+AS   ++V +SS  G ++     VY ATKGAM+QL + LA EWAKDNIR
Sbjct: 123 HLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIR 182

Query: 195 TNSVAPWYIRTPFTEPLLGNG---KFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI 251
            N V P  I T   E  + +    + ++++  R  + R+GEPKE++++VAFLC PAASY+
Sbjct: 183 VNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYV 242

Query: 252 TGQTVCIDGGFTVN-GF 267
           TGQ + +DGG   N GF
Sbjct: 243 TGQIIYVDGGLMANCGF 259

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score =  229 bits (584), Expect = 8e-76
 Identities = 140/258 (54%), Positives = 188/258 (72%), Gaps = 4/258 (1%)

Query: 15  RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGS 74
           RWSL+G TALVTGG+KG+G A+VEEL+ LGA V+TCSR E EL+EC+   + KGL V GS
Sbjct: 1   RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGS 60

Query: 75  VCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAF 134
           VCD+ SR +R  L+ TV+ +F+GKLNI VNN G  + K   ++  +D++++M TNFE+A+
Sbjct: 61  VCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAY 120

Query: 135 HLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIR 194
           HL Q+A+PLL+AS   +++ +SS  G  +    ++YSA+KGA+NQ+ K+LACEWAKDNIR
Sbjct: 121 HLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIR 180

Query: 195 TNSVAPWYIRTPFTEPLL----GNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY 250
            NSVAP  I TP  E  +       + +D    +TPMGR G+P+EVS+L+AFLC PAASY
Sbjct: 181 VNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASY 240

Query: 251 ITGQTVCIDGGFTVNGFF 268
           ITGQ +  DGGFT NG F
Sbjct: 241 ITGQIIWADGGFTANGGF 258

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  222 bits (566), Expect = 4e-73
 Identities = 66/250 (26%), Positives = 109/250 (43%), Gaps = 11/250 (4%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
             G   LVTGG +G+G A+ +  +  GA V  C                + +       D
Sbjct: 3   FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVA------EAIGGAFFQVD 56

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           +    +R   +   +    G++++ VNN   +     L     ++  V+  N  +  HL 
Sbjct: 57  LEDERERVRFVEEAAYAL-GRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLS 115

Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNS 197
            LA   +R  G  +IV ++S  G+ +      Y+A+KG +  L ++LA + A   IR N+
Sbjct: 116 ALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNA 175

Query: 198 VAPWYIRTPFTEPLLGNGKFVDEVK----SRTPMGRLGEPKEVSSLVAFLCMPAASYITG 253
           VAP  I T      +      +  +        + RLG+P+EV+  V FL    AS+ITG
Sbjct: 176 VAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITG 235

Query: 254 QTVCIDGGFT 263
             + +DGG T
Sbjct: 236 AILPVDGGMT 245

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score =  220 bits (561), Expect = 2e-72
 Identities = 72/246 (29%), Positives = 111/246 (45%), Gaps = 3/246 (1%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L+   A++TGG  G+G A+ E  ++ GA +           E    ++  G +V    CD
Sbjct: 3   LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAA--IRNLGRRVLTVKCD 60

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           VS     +     V S F G+ +I VNN G   L P  E   E +      N +S F + 
Sbjct: 61  VSQPGDVEAFGKQVISTF-GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMA 119

Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNS 197
           +   P ++ +G   I+ ++S    +     T Y +TK A     + LA +  KD I  N+
Sbjct: 120 KAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNA 179

Query: 198 VAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVC 257
           +AP  +RT  TE    +  F         + RL  P +++   AFL    AS+ITGQT+ 
Sbjct: 180 IAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDASFITGQTLA 239

Query: 258 IDGGFT 263
           +DGG  
Sbjct: 240 VDGGMV 245

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  210 bits (536), Expect = 2e-68
 Identities = 68/262 (25%), Positives = 118/262 (45%), Gaps = 16/262 (6%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGL---KVTGS 74
                A++TG + G+G A     +  GA V    R    L E    +   G+    V   
Sbjct: 3   FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSV 62

Query: 75  VCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGT----SVLKPTLEYNAEDFSLVMSTNF 130
           V DV++   +  +++T    F GKL+I VNN G     S  K     + E +   ++ N 
Sbjct: 63  VADVTTDAGQDEILSTTLGKF-GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNL 121

Query: 131 ESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAK 190
            S   L + A P L ++    + + S A G+ +      YS  K A++Q  +N A +  +
Sbjct: 122 RSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQ 181

Query: 191 DNIRTNSVAPWYIRTPFTEPLLGNGKFVDE-------VKSRTPMGRLGEPKEVSSLVAFL 243
             IR NS++P  + T F   +    +   +       +K   P G +G+P++++ ++AFL
Sbjct: 182 HGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFL 241

Query: 244 C-MPAASYITGQTVCIDGGFTV 264
                +SYI G  + +DGG ++
Sbjct: 242 ADRKTSSYIIGHQLVVDGGSSL 263

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score =  207 bits (529), Expect = 2e-67
 Identities = 86/252 (34%), Positives = 136/252 (53%), Gaps = 3/252 (1%)

Query: 16  WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK-GLKVTGS 74
           + L+G  ALVTGG++GLG  + + L+  G +V   SR   E +E    L  K G++    
Sbjct: 1   FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAF 60

Query: 75  VCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAF 134
            CDVS+  + + L+  V   F GKL+  VN  G +   P  E+  ++F  V+  N    +
Sbjct: 61  RCDVSNYEEVKKLLEAVKEKF-GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTY 119

Query: 135 HLCQLAHPLLRASGAASIVLMS-SALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNI 193
           ++C+ A  LLR S   SI+ +    +  V+    + Y+A+KG +  L K LA EW +  I
Sbjct: 120 YVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGI 179

Query: 194 RTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG 253
           R N +AP + RT  TE +  + + +D +  R P+GR G P+++  +  FL    A Y+TG
Sbjct: 180 RVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKYVTG 239

Query: 254 QTVCIDGGFTVN 265
           Q + +DGG+T N
Sbjct: 240 QIIFVDGGWTAN 251

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  207 bits (527), Expect = 2e-67
 Identities = 68/248 (27%), Positives = 114/248 (45%), Gaps = 10/248 (4%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           +  G+ ALVTG  KG+G   V+ L   GA V   +RT ++L      L  +   +     
Sbjct: 2   NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVS----LAKECPGIEPVCV 57

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           D+      +  +  +     G +++ VNN    +++P LE   E F    S N  S F +
Sbjct: 58  DLGDWDATEKALGGI-----GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQV 112

Query: 137 CQLAHPLL-RASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRT 195
            Q+    +       SIV +SS +  V+      YS+TKGAM  L K +A E     IR 
Sbjct: 113 SQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRV 172

Query: 196 NSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT 255
           NSV P  + T   + +  + +F  ++K R P+ +  E ++V + + FL    ++  +G  
Sbjct: 173 NSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSGGG 232

Query: 256 VCIDGGFT 263
           + +D G+ 
Sbjct: 233 ILVDAGYL 240

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  206 bits (524), Expect = 8e-67
 Identities = 67/248 (27%), Positives = 110/248 (44%), Gaps = 10/248 (4%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
            L G   LVTG  KG+G   V+ L   GA V   SRT+ +L+  +         +     
Sbjct: 4   FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----GIEPVCV 59

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           D+      +  + +V     G +++ VNN   ++L+P LE   E F      N  +   +
Sbjct: 60  DLGDWEATERALGSV-----GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQV 114

Query: 137 CQLAHPLLRA-SGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRT 195
            Q+    L A     +IV +SS     +    +VY +TKGA++ L K +A E     IR 
Sbjct: 115 SQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRV 174

Query: 196 NSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT 255
           N+V P  + T   +    +      + +R P+G+  E + V + + FL    +   TG T
Sbjct: 175 NAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGST 234

Query: 256 VCIDGGFT 263
           + ++GGF 
Sbjct: 235 LPVEGGFW 242

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  203 bits (517), Expect = 1e-65
 Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 12/252 (4%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
             G   +VTGG +G+G  +V      GA V  C + E+        L+ +       +CD
Sbjct: 4   YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRA----LEQELPGAVFILCD 59

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVL-KPTLEYNAEDFSLVMSTNFESAFHL 136
           V+     +TL++     F  +L+  VNN G     +   E +A+ F  ++  N    + L
Sbjct: 60  VTQEDDVKTLVSETIRRFG-RLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTL 118

Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTN 196
            +LA P LR S   +++ +SS +G +       Y ATKGA+  + K LA + +   +R N
Sbjct: 119 TKLALPYLRKSQG-NVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVN 177

Query: 197 SVAPWYIRTPFTEPLLGNG----KFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT 252
            ++P  I TP  E L          + E     P+GR+G+P EV +   FL    A++ T
Sbjct: 178 CISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-ANFCT 236

Query: 253 GQTVCIDGGFTV 264
           G  + + GG  +
Sbjct: 237 GIELLVTGGAEL 248

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score =  202 bits (514), Expect = 3e-65
 Identities = 75/249 (30%), Positives = 109/249 (43%), Gaps = 7/249 (2%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L G T ++TGG +GLG     +    GA V      + E       L   G        D
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLD 59

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           V+     Q ++      F G ++  VNN G S        + E F  V+  N    F   
Sbjct: 60  VTIEEDWQRVVAYAREEF-GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGM 118

Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNS 197
           +   P ++ +G  SIV +SSA G++   + + Y A+K  +  L+K  A E   D IR NS
Sbjct: 119 KTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNS 178

Query: 198 VAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLG-EPKEVSSLVAFLCMPAASYITGQTV 256
           V P    TP T       +  +     TPMGR+G EP E++  V  L    +SY+TG  +
Sbjct: 179 VHPGMTYTPMTAET--GIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAEL 236

Query: 257 CIDGGFTVN 265
            +DGG+T  
Sbjct: 237 AVDGGWTTG 245

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  200 bits (511), Expect = 2e-64
 Identities = 64/262 (24%), Positives = 117/262 (44%), Gaps = 16/262 (6%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGL---KVTGS 74
               T ++TG + G+G       +  GA V    R+   L E    +   G+   +V   
Sbjct: 3   FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSV 62

Query: 75  VCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKP----TLEYNAEDFSLVMSTNF 130
           V DV++   +  +IN+    F GK+++ VNN G ++         +   + +   +  N 
Sbjct: 63  VADVTTEDGQDQIINSTLKQF-GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNL 121

Query: 131 ESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAK 190
           ++   + +   P L AS    + + S   G  +      Y+  K A++Q  ++ A + AK
Sbjct: 122 QAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAK 181

Query: 191 DNIRTNSVAPWYIRTPFTEPLLGNGK-------FVDEVKSRTPMGRLGEPKEVSSLVAFL 243
             IR NSV+P  + T FT  +    +       F+   K   P+G  G+P+ +++++ FL
Sbjct: 182 FGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFL 241

Query: 244 CMPAAS-YITGQTVCIDGGFTV 264
                S YI GQ++  DGG ++
Sbjct: 242 ADRNLSFYILGQSIVADGGTSL 263

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  198 bits (505), Expect = 8e-64
 Identities = 80/258 (31%), Positives = 110/258 (42%), Gaps = 12/258 (4%)

Query: 14  NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTG 73
           NR  LQG  ALVTGG  G+GL VV+ L   GA V      E    +    L   G +   
Sbjct: 2   NR--LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMF 56

Query: 74  SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESA 133
              DVSS      ++  V     G LN+ VNN G  +         EDFS ++  N ES 
Sbjct: 57  VRHDVSSEADWTLVMAAVQRRL-GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESV 115

Query: 134 FHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKD-- 191
           F  CQ     ++ +G  SI+ M+S    +       YSA+K A++ L +  A    K   
Sbjct: 116 FIGCQQGIAAMKETGG-SIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGY 174

Query: 192 NIRTNSVAPWYIRTPFTEPLLGNG---KFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAA 248
            IR NS+ P  I TP  +  L  G   + V         GR   P+ ++ LV FL    +
Sbjct: 175 AIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDES 234

Query: 249 SYITGQTVCIDGGFTVNG 266
           S ++G  +  D      G
Sbjct: 235 SVMSGSELHADNSILGMG 252

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  198 bits (504), Expect = 8e-64
 Identities = 68/250 (27%), Positives = 123/250 (49%), Gaps = 3/250 (1%)

Query: 14  NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTG 73
             +  +   ALVTG  +G+G  + + L+   + V   SRT+   +  +  ++  G + +G
Sbjct: 4   YYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSG 63

Query: 74  SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESA 133
              DVS + +   +IN + +  +  ++I VNN G +     L    +++  V+ TN  S 
Sbjct: 64  YAGDVSKKEEISEVINKILT-EHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSL 122

Query: 134 FHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNI 193
           F++ Q     +  +    I+ +SS +G+        YS++K  +    K+LA E A  NI
Sbjct: 123 FYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNI 182

Query: 194 RTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG 253
             N++AP +I +  T+    + +    + S  P GR+G P+EV++L  FL    + YI G
Sbjct: 183 TVNAIAPGFISSDMTDK--ISEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGYING 240

Query: 254 QTVCIDGGFT 263
           +   IDGG +
Sbjct: 241 RVFVIDGGLS 250

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  198 bits (504), Expect = 9e-64
 Identities = 73/253 (28%), Positives = 122/253 (48%), Gaps = 8/253 (3%)

Query: 14  NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTG 73
           NR  L G  A++TGGT G+GLA+  +    GA V    R      +    +     ++  
Sbjct: 2   NR--LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD-QIQF 58

Query: 74  SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESA 133
              D S       L +     F G ++  VNN G +V K   E    ++  +++ N +  
Sbjct: 59  FQHDSSDEDGWTKLFDATEKAF-GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGV 117

Query: 134 FHLCQLAHPLLRASGA-ASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWA--K 190
           F   +L    ++  G  ASI+ MSS  G V       Y+A+KGA+  ++K+ A + A   
Sbjct: 118 FFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKD 177

Query: 191 DNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY 250
            ++R N+V P YI+TP  + L G  +     +++TPMG +GEP +++ +  +L    + +
Sbjct: 178 YDVRVNTVHPGYIKTPLVDDLPGA-EEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKF 236

Query: 251 ITGQTVCIDGGFT 263
            TG    +DGG+T
Sbjct: 237 ATGSEFVVDGGYT 249

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  197 bits (503), Expect = 1e-63
 Identities = 68/247 (27%), Positives = 112/247 (45%), Gaps = 9/247 (3%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L+    L+TG   G+G A +E  +  GA +  C   E  L E       + +     V D
Sbjct: 3   LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAA-----EAVGAHPVVMD 57

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           V+     +       +   G+L+  V+  G +      +   ED+ LV+  N   +F + 
Sbjct: 58  VADPASVERGFAEALAHL-GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVA 116

Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNS 197
           + A   +R     SIVL +S    +       Y+A+   +  L + LA E  +  IR N+
Sbjct: 117 KAASEAMREKNPGSIVLTASR-VYLGNLGQANYAASMAGVVGLTRTLALELGRWGIRVNT 175

Query: 198 VAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVC 257
           +AP +I T  T  +    K  ++  + TP+GR G+P EV+    FL    +S+ITGQ + 
Sbjct: 176 LAPGFIETRMTAKV--PEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQVLF 233

Query: 258 IDGGFTV 264
           +DGG T+
Sbjct: 234 VDGGRTI 240

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  199 bits (507), Expect = 1e-63
 Identities = 84/260 (32%), Positives = 123/260 (47%), Gaps = 9/260 (3%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQ-----MKGLKVT 72
           LQG  A+VTGG  G+G A+V+EL  LG+ V   SR    L      LQ      K  +V 
Sbjct: 10  LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVI 69

Query: 73  GSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFES 132
              C++ +  +   L+ +    F GK+N  VNN G   L P    +++ +  V+ TN   
Sbjct: 70  PIQCNIRNEEEVNNLVKSTLDTF-GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTG 128

Query: 133 AFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDN 192
            F++C+  +         SIV +                A +  +  L K+LA EWA   
Sbjct: 129 TFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPL-AVHSGAARAGVYNLTKSLALEWACSG 187

Query: 193 IRTNSVAPWYIRTPFTEPLLGNG--KFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY 250
           IR N VAP  I +       G+    F +    + P  R+G P+EVSS+V FL  PAAS+
Sbjct: 188 IRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAASF 247

Query: 251 ITGQTVCIDGGFTVNGFFFS 270
           ITGQ+V +DGG ++    + 
Sbjct: 248 ITGQSVDVDGGRSLYTHSYE 267

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score =  196 bits (499), Expect = 7e-63
 Identities = 73/257 (28%), Positives = 117/257 (45%), Gaps = 12/257 (4%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK-GLKVTGSV 75
           S    T +VTGG +G+GLA    ++  GA V    R+  +  E    +  + G+K     
Sbjct: 6   SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQ 65

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
           CDVS+       I  + +   G ++  + N G SV+KP  E   EDF+ V   N    F+
Sbjct: 66  CDVSNTDIVTKTIQQIDADL-GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFN 124

Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVG--------TVYSATKGAMNQLAKNLACE 187
            C+    L         ++++S++     N            Y+++K A + L K LA E
Sbjct: 125 TCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAE 184

Query: 188 WAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA 247
           WA   IR N+++P Y+ T  T  +  + K  D   S  P+ R  +P+E++     L    
Sbjct: 185 WASAGIRVNALSPGYVNTDQTAHM--DKKIRDHQASNIPLNRFAQPEEMTGQAILLLSDH 242

Query: 248 ASYITGQTVCIDGGFTV 264
           A+Y+TG    IDGG  +
Sbjct: 243 ATYMTGGEYFIDGGQLI 259

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  195 bits (496), Expect = 3e-62
 Identities = 66/260 (25%), Positives = 117/260 (45%), Gaps = 14/260 (5%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGL---KVTGS 74
             G + ++TG + G+G +     +  GA V    R E  L E    +   G+   K+   
Sbjct: 2   FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAV 61

Query: 75  VCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTL--EYNAEDFSLVMSTNFES 132
           V DV+    +  +INT  + F GK++I VNN G ++   T   +   E +      NF++
Sbjct: 62  VADVTEASGQDDIINTTLAKF-GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQA 120

Query: 133 AFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDN 192
              + Q     L  +    + + S   G  + +    Y+  K A++Q  +  A +  +  
Sbjct: 121 VIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHG 180

Query: 193 IRTNSVAPWYIRTPFTEPLLGNG-------KFVDEVKSRTPMGRLGEPKEVSSLVAFLC- 244
           +R NSV+P  + T F   +            F+   K   P+G  G+P+E+++++ FL  
Sbjct: 181 VRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLAD 240

Query: 245 MPAASYITGQTVCIDGGFTV 264
              +SYI GQ++  DGG T+
Sbjct: 241 RNLSSYIIGQSIVADGGSTL 260

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  194 bits (494), Expect = 4e-62
 Identities = 56/259 (21%), Positives = 107/259 (41%), Gaps = 11/259 (4%)

Query: 11  SRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGL- 69
           +R      +   ALVTG + G+G AV   L   G  V  C+RT   + E     +  G  
Sbjct: 1   ARPGMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYP 60

Query: 70  -KVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMST 128
             +    CD+S+     ++ + + S     ++I +NN G +     L  +   +  + + 
Sbjct: 61  GTLIPYRCDLSNEEDILSMFSAIRSQH-SGVDICINNAGLARPDTLLSGSTSGWKDMFNV 119

Query: 129 NFESAFHLCQLAHPLLRASGAA--SIVLMSSALG--IVSANVGTVYSATKGAMNQLAKNL 184
           N  +     + A+  ++        I+ ++S  G  ++  +V   YSATK A+  L + L
Sbjct: 120 NVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGL 179

Query: 185 ACEW--AKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAF 242
             E   A+ +IR   ++P  + T F   L  + K  ++  +     +  +P++V+  V +
Sbjct: 180 RQELREAQTHIRATCISPGVVETQFAFKL--HDKDPEKAAATYEQMKCLKPEDVAEAVIY 237

Query: 243 LCMPAASYITGQTVCIDGG 261
           +    A    G       G
Sbjct: 238 VLSTPAHIQIGDIQMRPTG 256

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score =  192 bits (490), Expect = 2e-61
 Identities = 75/265 (28%), Positives = 106/265 (40%), Gaps = 20/265 (7%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L+G   L+TGG  GLG A+V+     GA V    ++   L E        G  V G V D
Sbjct: 3   LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH---GDNVLGIVGD 59

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNA-----EDFSLVMSTNFES 132
           V S   ++   +   + F GK++  + N G       L           F  V   N + 
Sbjct: 60  VRSLEDQKQAASRCVARF-GKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKG 118

Query: 133 AFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDN 192
             H  +   P L AS    I  +S+A G      G +Y+A K A+  L + LA E A   
Sbjct: 119 YIHAVKACLPALVASRGNVIFTISNA-GFYPNGGGPLYTAAKHAIVGLVRELAFELA-PY 176

Query: 193 IRTNSVAPWYIRTPFTEPL--------LGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLC 244
           +R N V    I +    P         +      D +KS  P+GR+ E +E +    F  
Sbjct: 177 VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVFFA 236

Query: 245 MPA-ASYITGQTVCIDGGFTVNGFF 268
               A+  TG  +  DGG  V GFF
Sbjct: 237 TRGDAAPATGALLNYDGGLGVRGFF 261

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score =  192 bits (488), Expect = 3e-61
 Identities = 74/255 (29%), Positives = 115/255 (45%), Gaps = 12/255 (4%)

Query: 20  GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVS 79
              ALVTG T G+GL +   L   G  V  C+R E  L   +  L+  G++  G  CDV 
Sbjct: 2   SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVR 61

Query: 80  SRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQL 139
           S P+ + L+  V   + G +++ VNN G      T E   E +  V+ TN    F + + 
Sbjct: 62  SVPEIEALVAAVVERY-GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQ 120

Query: 140 AHPL--LRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNS 197
                 +   G   IV ++S  G         YSA+K  +    K L  E A+  I  N+
Sbjct: 121 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 180

Query: 198 VAPWYIRTPFTEPLLGNG---------KFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAA 248
           V P ++ TP    +  +          +  D + +R P+GR  +P EV+ +VA+L  P A
Sbjct: 181 VCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGA 240

Query: 249 SYITGQTVCIDGGFT 263
           + +T Q + + GG  
Sbjct: 241 AAVTAQALNVCGGLG 255

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score =  191 bits (486), Expect = 4e-61
 Identities = 62/254 (24%), Positives = 107/254 (42%), Gaps = 14/254 (5%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
           TA+VT      G+     LS  G TV     +  + +E      ++    T       S 
Sbjct: 2   TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDE------LEAFAETYPQLKPMSE 55

Query: 82  PQRQTLINTVSSLFNGKLNIFVNNVGTSV-LKPTLEYNAEDFSLVMSTNFESAFHLCQLA 140
            +   LI  V+S + G++++ V+N   +   +P  +Y  ED+   +       F L    
Sbjct: 56  QEPAELIEAVTSAY-GQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAV 114

Query: 141 HPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAP 200
              ++   +  I+ ++SA         + Y++ +     LA  L+ E  + NI   ++ P
Sbjct: 115 ASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGP 174

Query: 201 WYIRTPFT------EPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ 254
            Y+ +  +      EP   N + V  VK  T + RLG  KE+  LVAFL   +  Y+TGQ
Sbjct: 175 NYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLTGQ 234

Query: 255 TVCIDGGFTVNGFF 268
              + GGF +   +
Sbjct: 235 VFWLAGGFPMIERW 248

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  190 bits (483), Expect = 9e-61
 Identities = 65/252 (25%), Positives = 110/252 (43%), Gaps = 15/252 (5%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L G   ++T   +G+G A     +  GA V      E++L E       K   +   V D
Sbjct: 4   LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-----KYPGIQTRVLD 58

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           V+ + Q     N V      +L++  N  G       L+   +D+   M+ N  S + + 
Sbjct: 59  VTKKKQIDQFANEVE-----RLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMI 113

Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANV-GTVYSATKGAMNQLAKNLACEWAKDNIRTN 196
           +   P + A  + +I+ MSS    V   V   VYS TK A+  L K++A ++ +  IR N
Sbjct: 114 KAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCN 173

Query: 197 SVAPWYIRTPFTEPLLGNGK----FVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT 252
            V P  + TP  +  +          ++   R   GR    +E++ L  +L    ++Y+T
Sbjct: 174 CVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVT 233

Query: 253 GQTVCIDGGFTV 264
           G  V IDGG+++
Sbjct: 234 GNPVIIDGGWSL 245

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  187 bits (476), Expect = 2e-59
 Identities = 64/259 (24%), Positives = 104/259 (40%), Gaps = 14/259 (5%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETE-LNECIHHLQMKGLKVTGSV 75
           SL+G  ALVTG  +G+G  +  EL   G  V       TE   E +  ++  G       
Sbjct: 15  SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVK 74

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
            +V        +      +F GKL+I  +N G        +   E+F  V + N    F 
Sbjct: 75  ANVGVVEDIVRMFEEAVKIF-GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFF 133

Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRT 195
           + + A+  L   G   ++   +     +     VYS +KGA+   A+ +A + A   I  
Sbjct: 134 VAREAYKHLEIGGRLILMGSITG-QAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITV 192

Query: 196 NSVAPWYIRTPFTEPLLGNGKFVDE-----------VKSRTPMGRLGEPKEVSSLVAFLC 244
           N VAP  I+T     +        E               +P+ R+G P +++ +V FL 
Sbjct: 193 NVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLA 252

Query: 245 MPAASYITGQTVCIDGGFT 263
                ++TG+ + IDGG  
Sbjct: 253 SNDGGWVTGKVIGIDGGAC 271

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score =  185 bits (470), Expect = 1e-58
 Identities = 72/252 (28%), Positives = 121/252 (48%), Gaps = 3/252 (1%)

Query: 12  RQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKV 71
             +   L G  A++TG   G+G  +    +  GA+V          N  +  +Q  G + 
Sbjct: 3   NSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQA 62

Query: 72  TGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFE 131
               CD++S  +   L +   S   GK++I VNN G    KP  +    DF      N  
Sbjct: 63  FACRCDITSEQELSALADFAISKL-GKVDILVNNAGGGGPKP-FDMPMADFRRAYELNVF 120

Query: 132 SAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKD 191
           S FHL QL  P +  +G   I+ ++S          T Y+++K A + L +N+A +  + 
Sbjct: 121 SFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEK 180

Query: 192 NIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI 251
           NIR N +AP  I T   + ++   +   ++   TP+ RLG+P+++++   FLC PAAS++
Sbjct: 181 NIRVNGIAPGAILTDALKSVI-TPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWV 239

Query: 252 TGQTVCIDGGFT 263
           +GQ + + GG  
Sbjct: 240 SGQILTVSGGGV 251

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score =  185 bits (471), Expect = 1e-58
 Identities = 72/249 (28%), Positives = 122/249 (48%), Gaps = 3/249 (1%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRT-ETELNECIHHLQMKGLKVTGSVC 76
           L+G   ++TG + GLG ++    +   A V    R+ E E N  +  ++  G +      
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           DV+       L+ +    F GKL++ +NN G      + E +  D++ V+ TN   AF  
Sbjct: 65  DVTVESDVINLVQSAIKEF-GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLG 123

Query: 137 CQLAHPLLRA-SGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRT 195
            + A           +++ MSS    +   +   Y+A+KG M  + + LA E+A   IR 
Sbjct: 124 SREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRV 183

Query: 196 NSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT 255
           N++ P  I TP       + +   +V+S  PMG +GEP+E++++ A+L    ASY+TG T
Sbjct: 184 NNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTGIT 243

Query: 256 VCIDGGFTV 264
           +  DGG T+
Sbjct: 244 LFADGGMTL 252

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score =  185 bits (471), Expect = 1e-58
 Identities = 73/262 (27%), Positives = 117/262 (44%), Gaps = 10/262 (3%)

Query: 14  NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTG 73
           NR  LQ   A++TGG  G+G    +     GA V      +    +  +++      ++ 
Sbjct: 2   NR--LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD-VISF 58

Query: 74  SVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPT--LEYNAEDFSLVMSTNFE 131
             CDV+     + L++T  +   GKL+I   NVG     P   LE   EDF  VM  N  
Sbjct: 59  VHCDVTKDEDVRNLVDTTIAKH-GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVY 117

Query: 132 SAFHLCQLAHPLLRASGAASIVLMSSALGIVSA-NVGTVYSATKGAMNQLAKNLACEWAK 190
            AF + + A  ++  +   SIV  +S     +   V  VY+ATK A+  L  +L  E  +
Sbjct: 118 GAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGE 177

Query: 191 DNIRTNSVAPWYIRTPFTEPLLGNGKFVDE---VKSRTPMGRLGEPKEVSSLVAFLCMPA 247
             IR N V+P+ + +P    + G      E    ++    G L   ++V+  VA+L    
Sbjct: 178 YGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDE 237

Query: 248 ASYITGQTVCIDGGFTVNGFFF 269
           + Y++G  + IDGG+T     F
Sbjct: 238 SKYVSGLNLVIDGGYTRTNPAF 259

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  184 bits (468), Expect = 3e-58
 Identities = 59/256 (23%), Positives = 102/256 (39%), Gaps = 14/256 (5%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVH-TCSRTETELNECIHHLQMKGLKVTGSVC 76
           L G  AL TG  +G+G  +  EL   GA+V      +     E +  L+  G +      
Sbjct: 4   LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQA 63

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           D+S   +   L +   S F G L+  ++N G  V    LE   E F  V + N    F +
Sbjct: 64  DISKPSEVVALFDKAVSHF-GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFV 122

Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTN 196
            Q      R  G   +    +A+     N   +Y+ +K A+    +  A +     +  N
Sbjct: 123 AQQGLKHCRRGGRIILTSSIAAVMTGIPN-HALYAGSKAAVEGFCRAFAVDCGAKGVTVN 181

Query: 197 SVAPWYIRTPFTEPLLGNG-----------KFVDEVKSRTPMGRLGEPKEVSSLVAFLCM 245
            +AP  ++T   +    +            K  + + +  P+ R+G P ++   V+ LC 
Sbjct: 182 CIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSALCQ 241

Query: 246 PAASYITGQTVCIDGG 261
             + +I GQ + + GG
Sbjct: 242 EESEWINGQVIKLTGG 257

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score =  182 bits (463), Expect = 9e-58
 Identities = 67/247 (27%), Positives = 116/247 (46%), Gaps = 9/247 (3%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L G T LVTG   G+G A ++  +  GA++    R E  L E +  L+ + + V   V D
Sbjct: 3   LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAV---VAD 59

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           VS     + +       F G+L+   +  G +    +     E +  V+  N   +F + 
Sbjct: 60  VSDPKAVEAVFAEALEEF-GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVA 118

Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNS 197
           + A  +L        ++++ ++  + A     Y+A K  +  LA+ LA E A+  +R N 
Sbjct: 119 RKAGEVLEEG---GSLVLTGSVAGLGAFGLAHYAAGKLGVVGLARTLALELARKGVRVNV 175

Query: 198 VAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVC 257
           + P  I+TP T  L       ++    +P+GR G P+EV+    FL    ++YITGQ + 
Sbjct: 176 LLPGLIQTPMTAGL--PPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQALY 233

Query: 258 IDGGFTV 264
           +DGG ++
Sbjct: 234 VDGGRSI 240

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  182 bits (463), Expect = 1e-57
 Identities = 73/246 (29%), Positives = 113/246 (45%), Gaps = 11/246 (4%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L G  ALV+GG +G+G + V  +   GA V      + E       L      V     D
Sbjct: 4   LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYV---HLD 60

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           V+   Q +  ++T  + F G L++ VNN G   +    +Y   ++  ++  N    F   
Sbjct: 61  VTQPAQWKAAVDTAVTAF-GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGI 119

Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNS 197
           +     ++ +G  SI+ +SS  G+        Y+ATK A+  L K+ A E     IR NS
Sbjct: 120 RAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNS 179

Query: 198 VAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVC 257
           + P  ++TP T+       +V E   +T +GR  EP EVS+LV +L    +SY TG    
Sbjct: 180 IHPGLVKTPMTD-------WVPEDIFQTALGRAAEPVEVSNLVVYLASDESSYSTGAEFV 232

Query: 258 IDGGFT 263
           +DGG  
Sbjct: 233 VDGGTV 238

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score =  181 bits (459), Expect = 5e-57
 Identities = 64/258 (24%), Positives = 105/258 (40%), Gaps = 14/258 (5%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
             G   LVTG    +GLA    L+  G  +         L +    ++ KG++    VCD
Sbjct: 3   FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCD 62

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           V+S       +++V   F     +F N        P  +Y ++DF+ V++ N   AFH+ 
Sbjct: 63  VTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVL 122

Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNS 197
           +     +       IV  +S  G+        Y  +KGA+  L +  A + A  NIR N+
Sbjct: 123 KAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNA 182

Query: 198 VAPWYIRTPFTEPLLGNG--------------KFVDEVKSRTPMGRLGEPKEVSSLVAFL 243
           ++P Y+   F                          ++    PM R G+  E+  +VAFL
Sbjct: 183 ISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAFL 242

Query: 244 CMPAASYITGQTVCIDGG 261
               +S++TG  + I GG
Sbjct: 243 LGDDSSFMTGVNLPIAGG 260

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score =  180 bits (458), Expect = 8e-57
 Identities = 67/258 (25%), Positives = 115/258 (44%), Gaps = 13/258 (5%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHH--LQMKGLKVTGSV 75
           L+G  A+VTG T G+GL +   L+  GA +      +    E +        G+KV    
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
            D+S     + L++       G+++I VNN G        ++  E +  +++ N  + FH
Sbjct: 62  ADLSKGEAVRGLVDNAVRQM-GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFH 120

Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRT 195
               A P ++  G   I+ ++SA G+V++   + Y A K  +    K  A E A   I  
Sbjct: 121 GTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITA 180

Query: 196 NSVAPWYIRTPFTEPLLGNG----------KFVDEVKSRTPMGRLGEPKEVSSLVAFLCM 245
           N++ P ++RTP  E  +                + +  + P  +   P+++     FL  
Sbjct: 181 NAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLAS 240

Query: 246 PAASYITGQTVCIDGGFT 263
            AA+ ITG TV +DGG+T
Sbjct: 241 DAAAQITGTTVSVDGGWT 258

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  181 bits (461), Expect = 1e-56
 Identities = 54/255 (21%), Positives = 97/255 (38%), Gaps = 26/255 (10%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATV---------HTCSRTETELNECIHHLQMKG 68
             G   LVTG   GLG A     +  GA V             +  +  ++ +  ++ +G
Sbjct: 5   FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG 64

Query: 69  LKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMST 128
            K   +   V      + L+ T    F G++++ VNN G    +     + ED+ ++   
Sbjct: 65  GKAVANYDSVE---AGEKLVKTALDTF-GRIDVVVNNAGILRDRSFSRISDEDWDIIQRV 120

Query: 129 NFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEW 188
           +   +F + + A   ++      I++ +SA GI        YSA K  +  LA  L  E 
Sbjct: 121 HLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEG 180

Query: 189 AKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAA 248
            K+NI  N++AP          +               +    +P+ V+ LV +LC  + 
Sbjct: 181 RKNNIHCNTIAPNAGSRMTETVM------------PEDLVEALKPEYVAPLVLWLCHESC 228

Query: 249 SYITGQTVCIDGGFT 263
               G    +  G+ 
Sbjct: 229 -EENGGLFEVGAGWI 242

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  179 bits (456), Expect = 2e-56
 Identities = 58/258 (22%), Positives = 98/258 (37%), Gaps = 24/258 (9%)

Query: 20  GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHL--QMKGLKVTGSVCD 77
           G  ALVTG  +G+G A  E L + GA V           +C   L  Q +  K     CD
Sbjct: 3   GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCD 62

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           V+ + Q +     V   F G+L+I VNN G          N +++   +  N  S     
Sbjct: 63  VADQQQLRDTFRKVVDHF-GRLDILVNNAG--------VNNEKNWEKTLQINLVSVISGT 113

Query: 138 QLAHPLLRASGAA---SIVLMSSALGIVSANVGTVYSATKGAMNQLAKN--LACEWAKDN 192
            L    +          I+ MSS  G++      VY A+K  +    ++  LA       
Sbjct: 114 YLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSG 173

Query: 193 IRTNSVAPWYIRTPFTEPLLGN------GKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMP 246
           +R N++ P ++ T   E +          ++ D +K       + +P  +++ +  L   
Sbjct: 174 VRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIED 233

Query: 247 AASYITGQTVCIDGGFTV 264
            A  + G  + I     +
Sbjct: 234 DA--LNGAIMKITTSKGI 249

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score =  180 bits (458), Expect = 2e-56
 Identities = 71/251 (28%), Positives = 111/251 (44%), Gaps = 4/251 (1%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK-GLKVTGSV 75
           S QG  A +TGG  GLG  +   LS LGA     SR    L      +  + G KV    
Sbjct: 22  SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQ 81

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAF- 134
           CDV      Q  ++ +  +  G  NI +NN   + + PT   +   +  +          
Sbjct: 82  CDVRDPDMVQNTVSELIKVA-GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAF 140

Query: 135 HLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIR 194
              ++   L++A   A+ + +++      +      ++ K  +  ++K+LA EW K  +R
Sbjct: 141 VTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMR 200

Query: 195 TNSVAPWYIRTPFTEPLLG-NGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG 253
            N + P  I+T      L   G F  E+  R P GRLG  +E+++L AFLC   AS+I G
Sbjct: 201 FNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWING 260

Query: 254 QTVCIDGGFTV 264
             +  DGG  V
Sbjct: 261 AVIKFDGGEEV 271

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score =  178 bits (453), Expect = 3e-56
 Identities = 70/246 (28%), Positives = 114/246 (46%), Gaps = 17/246 (6%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           ++    LV   ++G+G AV + LS  GA V  C+R E  L    H            VCD
Sbjct: 2   IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRY---------VVCD 52

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           +         ++ +      +++I V N G        E   EDF   + + F +   + 
Sbjct: 53  LRK------DLDLLFEKV-KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIV 105

Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNS 197
           +   P ++  G   IV ++S   I         ++ + A+    K L+ E A   I  N 
Sbjct: 106 RNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNC 165

Query: 198 VAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVC 257
           VAP +  T   + LL   +   +V+S+ PM R+ +P+E++S+VAFLC   ASY+TGQT+ 
Sbjct: 166 VAPGWTETERVKELLSE-EKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQTIV 224

Query: 258 IDGGFT 263
           +DGG +
Sbjct: 225 VDGGLS 230

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score =  177 bits (451), Expect = 6e-56
 Identities = 67/244 (27%), Positives = 108/244 (44%), Gaps = 5/244 (2%)

Query: 23  ALVTGGTKGLGLAVVEELSMLGATVH-TCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
            +VTG ++G+G A+   L   G  V    +R+     E    ++  G +      DVS  
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKE 63

Query: 82  PQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAH 141
              + ++ T      G +++ VNN G +     +      +  V+  N    F   Q A 
Sbjct: 64  ADVEAMMKTAID-AWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAAT 122

Query: 142 PLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPW 201
            ++       I+ ++S +G++       Y+A K  +   +K  A E A  NI  N V P 
Sbjct: 123 KIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPG 182

Query: 202 YIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCM-PAASYITGQTVCIDG 260
           +I +  T  L        ++    P+GR G+P+ V+ LV FL + PAASYITGQ   IDG
Sbjct: 183 FIASDMTAKL--GEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFTIDG 240

Query: 261 GFTV 264
           G  +
Sbjct: 241 GIAI 244

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score =  176 bits (448), Expect = 3e-55
 Identities = 73/255 (28%), Positives = 111/255 (43%), Gaps = 10/255 (3%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGL--KVTGSV 75
                 L+TGG  GLG A    L+  GA +     +   L      +       +V  +V
Sbjct: 2   FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTV 61

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVL-KPTLEYNAEDFSLVMSTNFESAF 134
            DVS   Q +  +   +  F G+++ F NN G      PT  + A +F  V+S N    F
Sbjct: 62  ADVSDEAQVEAYVTATTERF-GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVF 120

Query: 135 HLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIR 194
              +    ++R  G+  +V  +S  GI      + Y+A K  +  L +N A E+ +  IR
Sbjct: 121 LGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIR 180

Query: 195 TNSVAPWYIRTPFTEPLLGNG------KFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAA 248
            N++AP  I TP  E  +         K  +E     P  R GE  E++++VAFL    A
Sbjct: 181 INAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDA 240

Query: 249 SYITGQTVCIDGGFT 263
           SY+    V IDGG +
Sbjct: 241 SYVNATVVPIDGGQS 255

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score =  172 bits (436), Expect = 1e-53
 Identities = 68/247 (27%), Positives = 123/247 (49%), Gaps = 6/247 (2%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
            +G  ALVTG ++G+G A+ E L+  GA V   + +E        +L   G  +   + +
Sbjct: 2   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGL---MLN 58

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           V+     ++++  + +   G+++I VNN G +     +    E+++ ++ TN  S F L 
Sbjct: 59  VTDPASIESVLEKIRA-EFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS 117

Query: 138 QLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNS 197
           +     +       I+ + S +G +       Y+A K  +   +K+LA E A   I  N 
Sbjct: 118 KAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNV 177

Query: 198 VAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVC 257
           VAP +I T  T  L  + +    + ++ P GRLG  +E+++ VAFL    A+YITG+T+ 
Sbjct: 178 VAPGFIETDMTRALSDDQR--AGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETLH 235

Query: 258 IDGGFTV 264
           ++GG  +
Sbjct: 236 VNGGMYM 242

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score =  172 bits (436), Expect = 1e-53
 Identities = 66/254 (25%), Positives = 98/254 (38%), Gaps = 11/254 (4%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
            ALVTG  +G+G A+   L   G  V      +         +   G        DVS R
Sbjct: 3   VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDR 62

Query: 82  PQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAH 141
            Q    +        G  ++ VNN G +   P      E    V + N +      Q A 
Sbjct: 63  DQVFAAVEQARKTL-GGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAV 121

Query: 142 PL-LRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAP 200
               +      I+   S  G V      VYS++K A+  L +  A + A   I  N   P
Sbjct: 122 EAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCP 181

Query: 201 WYIRTPFTEPLLGN---------GKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI 251
             ++TP    +            G    E   R  +GRL EP++V++ V++L  P + Y+
Sbjct: 182 GIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDYM 241

Query: 252 TGQTVCIDGGFTVN 265
           TGQ++ IDGG   N
Sbjct: 242 TGQSLLIDGGMVFN 255

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  170 bits (432), Expect = 4e-53
 Identities = 65/245 (26%), Positives = 104/245 (42%), Gaps = 14/245 (5%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
                + LVTGG +G+GLA+ + L+  G  V    R                    G   
Sbjct: 4   PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF-----------GVEV 52

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           DV+           V       + + V+N G S     +    E F  V++ N   AF +
Sbjct: 53  DVTDSDAVDRAFTAVEEHQG-PVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRV 111

Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTN 196
            Q A   ++ +    ++ + S  G+        Y+A+K  +  +A+++A E +K N+  N
Sbjct: 112 AQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTAN 171

Query: 197 SVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTV 256
            VAP YI T  T  L  + +         P  R+G P EV+ +V+FL    ASYI+G  +
Sbjct: 172 VVAPGYIDTDMTRAL--DERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVI 229

Query: 257 CIDGG 261
            +DGG
Sbjct: 230 PVDGG 234

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  168 bits (427), Expect = 3e-52
 Identities = 56/255 (21%), Positives = 90/255 (35%), Gaps = 26/255 (10%)

Query: 15  RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGS 74
           R S+ G   L+TG   G+G     E + L + +      +  L E     +  G KV   
Sbjct: 2   RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTF 61

Query: 75  VCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAF 134
           V D S+R    +    V +   G ++I VNN G                     N  + F
Sbjct: 62  VVDCSNREDIYSSAKKVKAEI-GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHF 120

Query: 135 HLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAK---D 191
              +   P +  +    IV ++SA G VS      Y ++K A     K L  E A     
Sbjct: 121 WTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQIT 180

Query: 192 NIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVA---------- 241
            ++T  + P ++ T F +               T +G   EP+EV + +           
Sbjct: 181 GVKTTCLCPNFVNTGFIK------------NPSTSLGPTLEPEEVVNRLMHGILTEQKMI 228

Query: 242 FLCMPAASYITGQTV 256
           F+    A   T + +
Sbjct: 229 FIPSSIAFLTTLERI 243

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  165 bits (419), Expect = 5e-51
 Identities = 66/255 (25%), Positives = 104/255 (40%), Gaps = 10/255 (3%)

Query: 18  LQGMTALVTGGT--KGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSV 75
           L G  ALV G T  + LG A+  +L   GA V    + E    E     +  G       
Sbjct: 6   LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALG-GALLFR 64

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKP----TLEYNAEDFSLVMSTNFE 131
            DV+   +   L   V     G L+  V+ +  +  +      ++   +D+ L +  +  
Sbjct: 65  ADVTQDEELDALFAGVKE-AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAY 123

Query: 132 SAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKD 191
           S   + + A PLLR  G   IV ++            V +  K A+    + LA E    
Sbjct: 124 SLVAVARRAEPLLREGG--GIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELGPK 181

Query: 192 NIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI 251
            +R N+++   +RT     + G  K  D V    P+ R    +EV +L  FL  P AS I
Sbjct: 182 GVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPLASGI 241

Query: 252 TGQTVCIDGGFTVNG 266
           TG+ V +D G+ + G
Sbjct: 242 TGEVVYVDAGYHIMG 256

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score =  164 bits (415), Expect = 2e-50
 Identities = 61/258 (23%), Positives = 102/258 (39%), Gaps = 14/258 (5%)

Query: 18  LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCD 77
           L G TAL+TG  +G+G A  E     GA V                +   G        D
Sbjct: 3   LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI---GPAACAIALD 59

Query: 78  VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC 137
           V+ +      +  +   + G ++I VNN     L P +E   E +  + + N      + 
Sbjct: 60  VTDQASIDRCVAELLDRW-GSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMM 118

Query: 138 QLAHPLL-RASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTN 196
           Q     +        I+ M+S  G     +  VY ATK A+  L ++      +  I  N
Sbjct: 119 QAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVN 178

Query: 197 SVAPWYIRTPFTEPL---------LGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA 247
           ++AP  +     + +         L  G+   +V +  P GR+G  ++++ +  FL  P 
Sbjct: 179 AIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLATPE 238

Query: 248 ASYITGQTVCIDGGFTVN 265
           A YI  QT  +DGG  ++
Sbjct: 239 ADYIVAQTYNVDGGNWMS 256

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score =  161 bits (408), Expect = 3e-49
 Identities = 36/252 (14%), Positives = 67/252 (26%), Gaps = 17/252 (6%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQM-KGLKVTGSV 75
            L     +      G+GL    EL                         +   + +T   
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHT 61

Query: 76  CDVS-SRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAF 134
            DV+    + + L+  +       ++I +N  G          +       ++ NF    
Sbjct: 62  YDVTVPVAESKKLLKKIFDQL-KTVDILINGAGI--------LDDHQIERTIAINFTGLV 112

Query: 135 HLCQLAHPLLRAS---GAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKD 191
           +                   I  + S  G  + +   VYSA+K A+     +LA      
Sbjct: 113 NTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPIT 172

Query: 192 NIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI 251
            +   S+ P   RTP           V+   +   +    +  E             +  
Sbjct: 173 GVTAYSINPGITRTPLVHTFNSWLD-VEPRVAELLLSHPTQTSEQ--CGQNFVKAIEANK 229

Query: 252 TGQTVCIDGGFT 263
            G    +D G  
Sbjct: 230 NGAIWKLDLGTL 241

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  157 bits (398), Expect = 6e-48
 Identities = 57/251 (22%), Positives = 89/251 (35%), Gaps = 25/251 (9%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
           +ALVTGG  GLG A    L   G  V                   +G  +     DV+  
Sbjct: 3   SALVTGGASGLGRAAALALKARGYRVVVLDLRR------------EGEDLIYVEGDVTRE 50

Query: 82  PQRQTLINTVSSLFNGK--LNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQL 139
              +  +            ++     +   +L     +  E F  V+  N    F++ +L
Sbjct: 51  EDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRL 110

Query: 140 AHPLLRA------SGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNI 193
           A   +R            IV  +S            Y+A+KG +  L    A E A   I
Sbjct: 111 AAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWGI 170

Query: 194 RTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPM-GRLGEPKEVSSLVAFLCMPAASYIT 252
           R  +VAP    TP  + L    K    + ++ P   RLG P+E ++LV  +       + 
Sbjct: 171 RVVTVAPGLFDTPLLQGL--PEKAKASLAAQVPFPPRLGRPEEYAALVLHIL--ENPMLN 226

Query: 253 GQTVCIDGGFT 263
           G+ V +DG   
Sbjct: 227 GEVVRLDGALR 237

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score =  153 bits (388), Expect = 1e-46
 Identities = 45/241 (18%), Positives = 87/241 (36%), Gaps = 19/241 (7%)

Query: 23  ALVTGGTKGLGLAVVEELSMLGA-------TVHTCSRTETELNECIHHLQMKGLKVTGSV 75
            L+TG  KG+G A+  E +            +   SRT  +L +     + +G       
Sbjct: 4   LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTIT 63

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
            D+S     + L   +   + G ++  VNN G        +   EDF   M+TN +  F 
Sbjct: 64  ADISDMADVRRLTTHIVERY-GHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFF 122

Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRT 195
           L Q    L+    +  I  ++S     +    ++Y  +K     L + +     K N+R 
Sbjct: 123 LTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVRI 182

Query: 196 NSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT 255
             V P  + TP    +                  +  P+++++ V    +  +  +  + 
Sbjct: 183 TDVQPGAVYTPMWGKV-----------DDEMQALMMMPEDIAAPVVQAYLQPSRTVVEEI 231

Query: 256 V 256
           +
Sbjct: 232 I 232

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score =  152 bits (385), Expect = 6e-46
 Identities = 43/255 (16%), Positives = 92/255 (36%), Gaps = 9/255 (3%)

Query: 18  LQGMTALVTGGT--KGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSV 75
           L G   LVTG      +   + + +   GA +    + +             G       
Sbjct: 3   LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLG-SDIVLQ 61

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEY----NAEDFSLVMSTNFE 131
           CDV+      T+   +  ++        +       +   +Y      E F +    +  
Sbjct: 62  CDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSY 121

Query: 132 SAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKD 191
           S   + +    +L      +++ +S      +     V    K ++    + +A     +
Sbjct: 122 SFVAMAKACRSMLNPGS--ALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPE 179

Query: 192 NIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI 251
            +R N+++   IRT     +    K +   ++ TP+ R    ++V +  AFLC   ++ I
Sbjct: 180 GVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGI 239

Query: 252 TGQTVCIDGGFTVNG 266
           +G+ V +DGGF++  
Sbjct: 240 SGEVVHVDGGFSIAA 254

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  150 bits (379), Expect = 7e-45
 Identities = 49/256 (19%), Positives = 93/256 (36%), Gaps = 19/256 (7%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSML---GATVHTCSRTETELNECIHHL--QMKGLKV 71
            L     ++TG ++G G A+  +L+ L   G+ +   +R+E+ L +    L  Q   LKV
Sbjct: 3   GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKV 62

Query: 72  TGSVCDVSSRPQRQTLINTVSS---LFNGKLNIFVNNV---GTSVLKPTLEYNAEDFSLV 125
             +  D+ +    Q L++ V         +  + +NN    G          +  + +  
Sbjct: 63  VLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNY 122

Query: 126 MSTNFESAFHLCQLAHPLLRASGAASIV--LMSSALGIVSANVGTVYSATKGAMNQLAKN 183
            + N  S   L        + S   S     +SS   +       +Y A K A + L + 
Sbjct: 123 WALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQV 182

Query: 184 LACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGK---FVDEVKSRTPMGRLGEPKEVSSLV 240
           LA E    ++R  S AP  +     +      K      +++     G L +    +  +
Sbjct: 183 LAAEE--PSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKL 240

Query: 241 AFLCMPAASYITGQTV 256
             L     ++ +G  V
Sbjct: 241 LGLL-QKDTFQSGAHV 255

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score =  147 bits (372), Expect = 6e-44
 Identities = 55/266 (20%), Positives = 99/266 (37%), Gaps = 28/266 (10%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECI--HHLQMKGLKVTGSVCDVS 79
            A++TGG + +G ++   L   G  V    R      + +       +         D+S
Sbjct: 3   AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS 62

Query: 80  SRPQR----QTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSL----------- 124
                    + +I+     F G+ ++ VNN       P L  +  + +            
Sbjct: 63  LSSSLLDCCEDIIDCSFRAF-GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAE 121

Query: 125 -----VMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQ 179
                 ++  F       +        S   S+V +  A+  +      VY+  K A+  
Sbjct: 122 LFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGG 181

Query: 180 LAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGR-LGEPKEVSS 238
           L +  A E A  +IR N+VAP     P   P     +  +E + + P+G+      +++ 
Sbjct: 182 LTRAAALELAPRHIRVNAVAPGLSLLPPAMP----QETQEEYRRKVPLGQSEASAAQIAD 237

Query: 239 LVAFLCMPAASYITGQTVCIDGGFTV 264
            +AFL    A YITG T+ +DGG  +
Sbjct: 238 AIAFLVSKDAGYITGTTLKVDGGLIL 263

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  140 bits (354), Expect = 2e-41
 Identities = 54/249 (21%), Positives = 91/249 (36%), Gaps = 13/249 (5%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC 76
           S++G+ A++TGG  GLGLA  E L   GA+        +        L    +     V 
Sbjct: 2   SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVT 61

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPT--LEYNAEDFSLVMSTNFESAF 134
                     L        +  +N     V +          +  EDF  V+  N    F
Sbjct: 62  SEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTF 121

Query: 135 HLCQLAHPLLRAS------GAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEW 188
           ++ +L    +  +          I+  +S            YSA+KG +  +   +A + 
Sbjct: 122 NVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDL 181

Query: 189 AKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPM-GRLGEPKEVSSLVAFLCMPA 247
           A   IR  ++AP    TP    L    K  + + S+ P   RLG+P E + LV  +    
Sbjct: 182 APIGIRVMTIAPGLFGTPLLTSL--PEKVCNFLASQVPFPSRLGDPAEYAHLVQAII--E 237

Query: 248 ASYITGQTV 256
             ++ G+ +
Sbjct: 238 NPFLNGEVI 246

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  137 bits (346), Expect = 4e-40
 Identities = 57/270 (21%), Positives = 98/270 (36%), Gaps = 53/270 (19%)

Query: 23  ALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRP 82
            +++G   G+G A  + L   G  +      + E+                 + D+S+  
Sbjct: 4   IVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV-----------------IADLSTAE 46

Query: 83  QRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHP 142
            R+  I  V +  +  ++  V   G            +    V+S N+  A  L     P
Sbjct: 47  GRKQAIADVLAKCSKGMDGLVLCAGLG-------PQTKVLGNVVSVNYFGATELMDAFLP 99

Query: 143 ---------------------------LLRASGAASIVLMSSALGIVSAN-VGTVYSATK 174
                                      L  A  A       + +           Y+ +K
Sbjct: 100 ALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSK 159

Query: 175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEV-KSRTPMGRLGEP 233
            A+    +  A  W +  +R N++AP    TP  +  L + ++ + + K   PMGR  EP
Sbjct: 160 NALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRAEP 219

Query: 234 KEVSSLVAFLCMPAASYITGQTVCIDGGFT 263
            E++S++AFL  PAASY+ G  + IDGG  
Sbjct: 220 SEMASVIAFLMSPAASYVHGAQIVIDGGID 249

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  137 bits (345), Expect = 1e-39
 Identities = 43/258 (16%), Positives = 81/258 (31%), Gaps = 27/258 (10%)

Query: 23  ALVTGGTKGLGLAVVEELSMLGATVHTCSRT------ETELNECIHHLQMKGLKVTGSVC 76
            L+TG + G+GL +   L+   +       T      +  L E    L      +     
Sbjct: 5   VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQL 64

Query: 77  DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           DV            V+      L             P      +  + V+  N      +
Sbjct: 65  DVRDSKSVAAARERVTEGRVDVLVCNAGLGLL---GPLEALGEDAVASVLDVNVVGTVRM 121

Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTN 196
            Q   P ++  G+  +++  S  G++      VY A+K A+  L ++LA       +  +
Sbjct: 122 LQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLS 181

Query: 197 SVAPWYIRTPFTEPLLGN-------------GKFVDEVKS--RTPMGRLGEPKEVSSLVA 241
            +    + T F E +LG+              +F   +    +        P+EV+ +  
Sbjct: 182 LIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVFL 241

Query: 242 FL---CMPAASYITGQTV 256
                  P   Y T +  
Sbjct: 242 TALRAPKPTLRYFTTERF 259

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  135 bits (340), Expect = 4e-39
 Identities = 54/250 (21%), Positives = 93/250 (37%), Gaps = 14/250 (5%)

Query: 17  SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECI-HHLQMKGLKVTGSV 75
            LQG   +VTG +KG+G  +   L+ +GA V   +R++  L + + H L++         
Sbjct: 11  MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIA 70

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
             +      +  +     L  G L++ + N  T+        +       M  NF S   
Sbjct: 71  GTMEDMTFAEQFVAQAGKLM-GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVV 129

Query: 136 LCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKD--NI 193
           L   A P+L+ S   SIV++SS  G V+  +   YSA+K A++    ++  E++    N+
Sbjct: 130 LTVAALPMLKQSN-GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNV 188

Query: 194 RTNSVAPWYIRTPFTEPLLGN-----GKFVDEVKSRTPMGRLGEPKEV----SSLVAFLC 244
                    I T      +           +E       G     +EV    S     L 
Sbjct: 189 SITLCVLGLIDTETAMKAVSGIVHMQAAPKEECALEIIKGGALRQEEVYYDSSLWTTLLI 248

Query: 245 MPAASYITGQ 254
              +  I   
Sbjct: 249 RNPSRKILEF 258

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  131 bits (329), Expect = 8e-38
 Identities = 37/258 (14%), Positives = 72/258 (27%), Gaps = 29/258 (11%)

Query: 19  QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDV 78
           +    LV GG   LG   V+        V +    E E       ++             
Sbjct: 1   EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVK----------MTD 50

Query: 79  SSRPQRQTLINTVSSLF-NGKLNIFVNN-VGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
           S   Q   +   V  L  + K++  +    G +      +   ++  L+   +  ++   
Sbjct: 51  SFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTIS 110

Query: 137 CQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWA--KDNIR 194
             LA           + L  +   +        Y   KGA++QL ++LA + +       
Sbjct: 111 SHLATK--HLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAA 168

Query: 195 TNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ 254
             +V P  + TP     +                     + +               +G 
Sbjct: 169 AIAVLPVTLDTPMNRKSMPE----------ADFSSWTPLEFLVETFHDWITGNKRPNSGS 218

Query: 255 T---VCIDGGFTVNGFFF 269
               V  DG   +   +F
Sbjct: 219 LIQVVTTDGKTELTPAYF 236

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  131 bits (329), Expect = 2e-37
 Identities = 58/280 (20%), Positives = 96/280 (34%), Gaps = 68/280 (24%)

Query: 23  ALVTGGTKGLGLAVVEEL-SMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR 81
           ALVTGG KG+GLA+V +L  +    V   +R  T     +  LQ +GL       D+   
Sbjct: 6   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDL 65

Query: 82  PQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAH 141
              + L + +   + G L++ VNN G +              + M TNF     +C    
Sbjct: 66  QSIRALRDFLRKEY-GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELL 124

Query: 142 PLLRASGAASIVLMSSALGIVS-------------------------------------- 163
           PL++  G   +V +SS + + +                                      
Sbjct: 125 PLIKPQG--RVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVH 182

Query: 164 ---ANVGTVYSATKGAMNQLAKNLACEWAK----DNIRTNSVAPWYIRTPFTEPLLGNGK 216
                  + Y  TK  +  L++  A + ++    D I  N+  P ++RT    P      
Sbjct: 183 QKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPK----- 237

Query: 217 FVDEVKSRTPMGRLGEPKEVSSLVAFLCM--PAASYITGQ 254
                           P+E +    +L +  P A    GQ
Sbjct: 238 ------------ATKSPEEGAETPVYLALLPPDAEGPHGQ 265

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score =  126 bits (317), Expect = 9e-36
 Identities = 49/254 (19%), Positives = 94/254 (37%), Gaps = 8/254 (3%)

Query: 18  LQGMTALVTG--GTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSV 75
           L+G   L+ G    K +   + +     GAT+      E  L + +  +  +        
Sbjct: 3   LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE-SLEKRVRPIAQELNSPYVYE 61

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFES--- 132
            DVS     ++L N+V     G L+  V++V  +  +       E      +T  E    
Sbjct: 62  LDVSKEEHFKSLYNSVKKDL-GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVY 120

Query: 133 AFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDN 192
           +          L  +GA+ + L              V    K A+    + LA +  K +
Sbjct: 121 SLIELTNTLKPLLNNGASVLTLSYLG-STKYMAHYNVMGLAKAALESAVRYLAVDLGKHH 179

Query: 193 IRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT 252
           IR N+++   IRT  +  +      +   +   P+ +    +EV +   +L    +S ++
Sbjct: 180 IRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSGVS 239

Query: 253 GQTVCIDGGFTVNG 266
           G+   +D G+ V G
Sbjct: 240 GEVHFVDAGYHVMG 253

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  123 bits (310), Expect = 7e-35
 Identities = 41/239 (17%), Positives = 80/239 (33%), Gaps = 28/239 (11%)

Query: 22  TALVTGGTKGLGLAVVEELSMLGATVH--TCSRTETELNECIHHLQMKGLKVTGSVCDVS 79
           + +VTG  +G+GL +V++L       H    +R   +  E      +K  +V      V+
Sbjct: 5   SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK---SIKDSRVHVLPLTVT 61

Query: 80  SRPQRQTLINTVSSLFNGK-LNIFVNNVGTSV-LKPTLEYNAEDFSLVMSTNFESAFHLC 137
                 T ++ V  +     L++ +NN G  +      E N    +  +  N  S   L 
Sbjct: 62  CDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLT 121

Query: 138 QLAHPLLRASGAASIVLM------------------SSALGIVSANVGTVYSATKGAMNQ 179
           Q   PLL+ + +                        +      +      Y  +K A+N 
Sbjct: 122 QKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINM 181

Query: 180 LAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSS 238
             + LA +   DN+   +  P +++T        N     E  +   +    +     +
Sbjct: 182 FGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK---NAALTVEQSTAELISSFNKLDNSHN 237

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score =  123 bits (308), Expect = 2e-34
 Identities = 64/282 (22%), Positives = 103/282 (36%), Gaps = 45/282 (15%)

Query: 23  ALVTGGTKGLGLAVVEELSMLGATVH-TCSRTETELNE------------------CIHH 63
           ALVTG  K LG ++ E L   G  V     R+  E N                    + +
Sbjct: 5   ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN 64

Query: 64  LQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFS 123
           +    +        V+   +   L+    + + G+ ++ VNN  +    P L  + +   
Sbjct: 65  VATAPVSGADGSAPVTLFTRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRNDEDGHE 123

Query: 124 L--------------VMSTNFESAFHLCQLAH------PLLRASGAASIVLMSSALGIVS 163
                          +  +N  + + L +         P        SI+ M  A+    
Sbjct: 124 PCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP 183

Query: 164 ANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKS 223
               T+Y+  KGA+  L ++ A E A   IR N V P         P        +  +S
Sbjct: 184 LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMP----PAVWEGHRS 239

Query: 224 RTPM-GRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTV 264
           + P+  R     EVS +V FLC   A YITG  V +DGG+++
Sbjct: 240 KVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL 281

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  116 bits (292), Expect = 2e-32
 Identities = 35/248 (14%), Positives = 81/248 (32%), Gaps = 29/248 (11%)

Query: 23  ALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRP 82
            +V GG   LG A++E     G TV     +  +  +    +            + +   
Sbjct: 5   VIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVD----------GNKNWTE 54

Query: 83  QRQTLINTVSSLF-NGKLNIFVNNVGTSVL-KPTLEYNAEDFSLVMSTNFESAFHLCQLA 140
           Q Q+++   +S     +++      G       + +   ++  L++  +  S+    +LA
Sbjct: 55  QEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLA 114

Query: 141 HPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAK--DNIRTNSV 198
                      + L  +A  +        Y   K A++ L  +LA + +   DN    ++
Sbjct: 115 TT--HLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTI 172

Query: 199 APWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLV-AFLCMPAASYITGQT-- 255
            P  + TP     + N                     +S  +  +    ++   +G    
Sbjct: 173 MPVTLDTPMNRKWMPN----------ADHSSWTPLSFISEHLLKWTTETSSRPSSGALLK 222

Query: 256 VCIDGGFT 263
           +  + G +
Sbjct: 223 ITTENGTS 230

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score =  113 bits (283), Expect = 1e-30
 Identities = 53/285 (18%), Positives = 90/285 (31%), Gaps = 35/285 (12%)

Query: 17  SLQGMTALVTG--GTKGLGLAVVEELSMLGATVHTCSRTET------------------- 55
            L+G  A + G     G G AV + L+  GA +   +                       
Sbjct: 5   DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVL 64

Query: 56  ------------ELNECIHHLQMKGLKVTGSVC-DVSSRPQRQTLINTVSSLFNGKLNIF 102
                        L+    + +     V  +     SS    Q     V   F     + 
Sbjct: 65  PDGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILV 124

Query: 103 VNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIV 162
            +      +   L   +    L   +    +F         +   G ASI L   A   +
Sbjct: 125 HSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERI 184

Query: 163 SANVGTVYSATKGAMNQLAKNLACEWAKDN-IRTNSVAPWYIRTPFTEPLLGNGKFVDEV 221
               G   S+ K A+    + LA E  +   IR N+++   + +   + +      ++  
Sbjct: 185 IPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYS 244

Query: 222 KSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNG 266
            +  P+ +     EV +  AFL  P AS ITG T+ +D G    G
Sbjct: 245 YNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSMG 289

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score =  104 bits (260), Expect = 1e-27
 Identities = 49/259 (18%), Positives = 87/259 (33%), Gaps = 37/259 (14%)

Query: 22  TALVTGGTKGLGLAVVEELSML---GATVHTCSRTETELNECIHHLQMKGLKVTGSVCDV 78
           + L+TG  +GLGL +V+ L  L      + T  R   +  E +  L      +     D+
Sbjct: 4   SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE-LEDLAKNHSNIHILEIDL 62

Query: 79  SSRPQRQTLINTVSSL--FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL 136
            +      L+  +  +    G   +F N              +++    + TN      L
Sbjct: 63  RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIML 122

Query: 137 CQLAHPLLRASGAASIVL-----------MSSALGIVSANVG---TVYSATKGAMNQLAK 182
            +   PLL+ +  A+              MSS LG +  N       Y  +K A+N   K
Sbjct: 123 AKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATK 182

Query: 183 NLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAF 242
           +L+ +     I   S+ P +++T                 S  P+       ++   ++ 
Sbjct: 183 SLSVDLYPQRIMCVSLHPGWVKTDMG-------------GSSAPLDVPTSTGQIVQTISK 229

Query: 243 LCMPAASYITGQTVCIDGG 261
           L         G  V  DG 
Sbjct: 230 L----GEKQNGGFVNYDGT 244

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score =  102 bits (253), Expect = 2e-26
 Identities = 44/260 (16%), Positives = 75/260 (28%), Gaps = 15/260 (5%)

Query: 18  LQGMTALVTG--GTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSV 75
           L G   LV+G      +   +       GA +         L + I         +    
Sbjct: 4   LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELD 63

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMS--TNFESA 133
                         T +     KL+  V+++G             D            SA
Sbjct: 64  VQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISA 123

Query: 134 FHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNI 193
           +    +A  LL        ++        +       +  K A+  + + +A E  K  +
Sbjct: 124 YSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVAKSALESVNRFVAREAGKYGV 183

Query: 194 RTNSVAPWYIRTPFTEPLLGNG----------KFVDEVKSRTPMGR-LGEPKEVSSLVAF 242
           R+N VA   IRT     ++G               +    R P+G  + +   V+  V  
Sbjct: 184 RSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCA 243

Query: 243 LCMPAASYITGQTVCIDGGF 262
           L        TG  +  DGG 
Sbjct: 244 LLSDWLPATTGDIIYADGGA 263

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 90.7 bits (223), Expect = 8e-22
 Identities = 41/324 (12%), Positives = 90/324 (27%), Gaps = 82/324 (25%)

Query: 23  ALVTG--GTKGLGLAVVEELSMLGATVHTCSRTETELNE--------------------- 59
             + G   T G G  + +ELS     +                                 
Sbjct: 5   CFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKM 64

Query: 60  -----------CIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGT 108
                            +          ++      + + N +   + GK+N+ V+++  
Sbjct: 65  NILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKY-GKINMLVHSLAN 123

Query: 109 SV--LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANV 166
           +    K  L  + + +   +S +  S           +    ++ I L   A   V    
Sbjct: 124 AKEVQKDLLNTSRKGYLDALSKSSYS-LISLCKYFVNIMKPQSSIISLTYHASQKVVPGY 182

Query: 167 GTVYSATKGAMNQLAKNLACEWAK-DNIRTNSVAPWYIRTPFTEPLLGNGK--------- 216
           G   S+ K A+    + LA    +  NIR N+++   +++     +              
Sbjct: 183 GGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTNQN 242

Query: 217 ----------------------------------FVDEVKSRTPMGRLGEPKEVSSLVAF 242
                                              ++  +   P+ +     ++ S+ +F
Sbjct: 243 KNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASF 302

Query: 243 LCMPAASYITGQTVCIDGGFTVNG 266
           L    +  ITGQT+ +D G  +  
Sbjct: 303 LLSRESRAITGQTIYVDNGLNIMF 326

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 68.8 bits (167), Expect = 8e-15
 Identities = 24/179 (13%), Positives = 53/179 (29%), Gaps = 15/179 (8%)

Query: 16  WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSV 75
            S++G  A+V  GT  +G+     L+  GA V  C R   +       +  +  KV  + 
Sbjct: 19  GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF-KVNVTA 77

Query: 76  CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFH 135
            + +    R   +           +         +           +    S    + ++
Sbjct: 78  AETADDASRAEAV--------KGAHFVFTAGAIGLELLP----QAAWQNESSIEIVADYN 125

Query: 136 LCQ-LAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNI 193
               L    + A+          A G +    G      +  + +L ++    +  + I
Sbjct: 126 AQPPLGIGGIDATDKGKEYGGKRAFGALGIG-GLKLKLHRACIAKLFESSEGVFDAEEI 183

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 63.2 bits (152), Expect = 1e-12
 Identities = 24/216 (11%), Positives = 56/216 (25%), Gaps = 13/216 (6%)

Query: 21  MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSS 80
           M   + GGT  LG  +   L+ LG  +   SR E +        +      + +      
Sbjct: 1   MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNED 60

Query: 81  RPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLA 140
             +   +        +  ++   +       K  +              + S     ++ 
Sbjct: 61  AAEACDIAVLTIPWEHA-IDTARDLKNILREKIVVSPLVPVSRGAKGFTYSSERSAAEIV 119

Query: 141 HPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAP 200
             +L +    S +    A    + +    +       +  +K +      +      +  
Sbjct: 120 AEVLESEKVVSALHTIPAARFANLDEKFDWDVPVCGDDDESKKVVMSLISEIDGLRPLDA 179

Query: 201 WYIRT-----PFTEPLLGNGKFVDEVKSRTPMGRLG 231
             +         T  +L        +     MG LG
Sbjct: 180 GPLSNSRLVESLTPLILN-------IMRFNGMGELG 208

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 60.8 bits (146), Expect = 1e-11
 Identities = 36/198 (18%), Positives = 63/198 (31%), Gaps = 11/198 (5%)

Query: 11  SRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQ-MKG 68
           +  + W   G T LVTGGT G+G  +   L+  GA  +   SR+  + +     +  ++ 
Sbjct: 1   ATDDEWKPTG-TVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEA 59

Query: 69  LKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMST 128
           L    +V       +            +  L+   +   T           E        
Sbjct: 60  LGARTTVAACDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRA 119

Query: 129 NFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEW 188
               A +L +L   L       + VL SS      A     Y+     ++ LA+    + 
Sbjct: 120 KVLGARNLHELTREL----DLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGLAQ----QR 171

Query: 189 AKDNIRTNSVAPWYIRTP 206
             D +   +VA       
Sbjct: 172 RSDGLPATAVAWGTWAGS 189

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 36.3 bits (82), Expect = 0.003
 Identities = 14/48 (29%), Positives = 20/48 (41%)

Query: 20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK 67
          G   LVTG    +   VVE+L   G  V   +R+ ++L         K
Sbjct: 11 GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAK 58

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.8 bits (81), Expect = 0.003
 Identities = 8/43 (18%), Positives = 12/43 (27%)

Query: 24 LVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQM 66
           + G T   GL  + +    G  V    R  + L         
Sbjct: 7  AIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAH 49

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 36.0 bits (81), Expect = 0.004
 Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 2/62 (3%)

Query: 18 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQM-KGLK-VTGSV 75
           QG    VTG T   G  +   L  +GATV   S T   +       ++  G++   G +
Sbjct: 6  WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDI 65

Query: 76 CD 77
           D
Sbjct: 66 RD 67

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	270
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	100.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	100.0
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	100.0
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.85
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.83
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.8
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.77
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.76
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.76
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.74
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.74
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.73
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.73
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.72
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.72
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.71
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.71
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.71
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.7
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.7
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.7
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.69
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.68
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.68
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.63
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.62
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.59
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.41
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.37
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.33
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.29
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.28
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.22
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	99.14
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.13
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.24
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.16
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.14
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	98.13
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	98.07
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	98.05
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	98.04
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.96
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.93
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.9
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.88
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.86
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.75
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.74
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.72
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.71
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.7
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.69
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.63
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.62
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.54
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.53
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.49
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.41
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.4
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.39
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.38
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.38
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.36
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.34
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.32
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.32
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.3
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.27
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.23
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.22
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.19
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	97.18
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	97.15
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	97.13
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.1
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.1
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.1
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	97.08
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.08
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	97.04
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.03
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	97.02
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	97.02
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.01
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	97.01
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	97.01
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	96.99
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.97
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	96.97
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.95
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	96.94
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.93
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.88
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.87
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	96.86
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	96.84
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.84
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.78
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.74
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.72
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	96.68
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	96.65
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	96.65
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.5
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.49
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	96.44
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	96.43
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.42
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	96.41
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.39
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.25
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	96.05
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	96.04
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	95.88
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	95.8
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	95.79
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	95.78
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.7
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	95.64
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	95.6
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	95.6
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	95.56
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	95.56
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	95.56
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	95.46
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	95.46
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	95.45
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	95.37
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	95.32
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	95.22
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	95.18
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.12
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	95.07
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	95.03
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	94.99
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	94.98
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	94.98
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	94.91
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	94.9
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	94.89
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	94.87
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	94.83
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	94.7
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	94.62
d2fr1a2	209	Erythromycin synthase, eryAI, 1st ketoreductase mo	94.59
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	94.58
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	94.58
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	94.45
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	94.42
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	94.41
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	94.41
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	94.39
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	94.37
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	94.33
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	94.33
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	94.3
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	94.28
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	94.18
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	94.18
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	94.13
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	94.12
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	94.08
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	93.99
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	93.95
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	93.94
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	93.89
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	93.78
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	93.78
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	93.76
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	93.76
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	93.76
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	93.64
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	93.6
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	93.54
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	93.32
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	93.31
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	93.27
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	93.22
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	93.13
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	93.09
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	93.05
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	92.95
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	92.83
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	92.74
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	92.71
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	92.69
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	92.67
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	92.57
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	92.33
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	92.32
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	92.28
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	92.27
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	92.09
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	92.05
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	91.91
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	91.87
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	91.8
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	91.59
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	91.36
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	91.28
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	91.27
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	90.93
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	90.88
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	90.86
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	90.81
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	90.64
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	90.53
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	90.43
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	90.4
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	90.27
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	90.27
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	90.11
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	89.66
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	89.57
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	89.52
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	89.39
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	89.28
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	89.04
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	88.78
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	88.64
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	88.63
d2o14a2	208	Hypothetical protein YxiM {Bacillus subtilis [TaxI	88.63
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	88.59
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	88.51
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	88.41
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	88.4
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	88.38
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	88.17
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	87.85
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	87.84
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	87.66
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	87.42
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	87.2
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	86.53
d2b3ta1	274	N5-glutamine methyltransferase, HemK {Escherichia	86.5
d1peya_	119	Sporulation response regulator Spo0F {Bacillus sub	86.39
d1pvva2	163	Ornithine transcarbamoylase {Archaeon Pyrococcus f	86.36
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	86.34
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	86.09
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	86.06
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	85.98
d1v71a1	318	Hypothetical protein C320.14 (SPCC320.14, SPCC330.	85.96
d1c4oa2	174	Nucleotide excision repair enzyme UvrB {Thermus th	85.75
d1pn3a_	391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	85.36
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	85.03
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	84.92
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	84.33
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	84.2
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	84.07
d7reqa2	168	Methylmalonyl-CoA mutase alpha subunit, C-terminal	83.94
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	83.42
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	83.31
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	83.27
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	82.93
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	82.89
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	82.69
d2cl5a1	214	Catechol O-methyltransferase, COMT {Rat (Rattus no	82.59
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	82.41
d2f5va1	379	Pyranose 2-oxidase {White-rot fungus (Peniophora s	82.27
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	82.27
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	82.26
d2b9ea1	293	NOL1R {Human (Homo sapiens) [TaxId: 9606]}	82.04
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	82.03
d2afhe1	289	Nitrogenase iron protein {Azotobacter vinelandii [	81.92
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	81.76
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	81.68
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	81.58
d1dcfa_	134	Receiver domain of the ethylene receptor {Thale cr	81.45
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	81.44
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	81.43
d2a9pa1	117	DNA-binding response regulator MicA, N-terminal do	81.41
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	81.01
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	80.91
d1p5ja_	319	L-serine dehydratase {Human (Homo sapiens) [TaxId:	80.63
d1vb3a1	428	Threonine synthase {Escherichia coli [TaxId: 562]}	80.44
d1gpea1	391	Glucose oxidase {Penicillium amagasakiense [TaxId:	80.35
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	80.34
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	80.21
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	80.19
d1im5a_	179	Pyrazinamidase/nicotinamidase {Archaeon Pyrococcus	80.1

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=9.8e-60  Score=394.72  Aligned_cols=249  Identities=35%  Similarity=0.588  Sum_probs=235.1

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQM-KGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      ++|+||++|||||++|||+++|+.|+++|++|++++|+++++++..+++.+ .+.++.++.+|++++++++++++++.++
T Consensus         1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (251)
T d1vl8a_           1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK   80 (251)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999999999999888887754 4778999999999999999999999999


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccc-ccCCCChhhhhh
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGI-VSANVGTVYSAT  173 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~-~~~~~~~~y~~s  173 (270)
                      + +++|+||||||....+++.+++.++|++++++|+.+++.++|.++|+|++++.|+||+++|..+. .+.++...|++|
T Consensus        81 ~-g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~~~Y~as  159 (251)
T d1vl8a_          81 F-GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAAS  159 (251)
T ss_dssp             H-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHH
T ss_pred             c-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccccchHHH
Confidence            9 89999999999998999999999999999999999999999999999999999999999998764 467788999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccC
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG  253 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  253 (270)
                      |+|+++|+|++|.|++++|||||+|+||+++|+|.......++..+.+....|++|+.+|+|+|++++||+|++++++||
T Consensus       160 Kaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~a~~itG  239 (251)
T d1vl8a_         160 KGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKYVTG  239 (251)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTTCCS
T ss_pred             HHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhCCCcC
Confidence            99999999999999999999999999999999999888777778888889999999999999999999999999999999


Q ss_pred             cEEeecCCcccc
Q 024230          254 QTVCIDGGFTVN  265 (270)
Q Consensus       254 ~~i~vdgG~~~~  265 (270)
                      |+|.||||++.+
T Consensus       240 ~~i~vDGG~ta~  251 (251)
T d1vl8a_         240 QIIFVDGGWTAN  251 (251)
T ss_dssp             CEEEESTTGGGC
T ss_pred             cEEEeCcCeeCc
Confidence            999999999854

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1.8e-59  Score=393.28  Aligned_cols=248  Identities=27%  Similarity=0.436  Sum_probs=233.3

Q ss_pred             cccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           13 QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        13 ~~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      .+.++|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.++++..+.++.++.+|++|+++++++++++.
T Consensus         3 n~~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~   82 (251)
T d2c07a1           3 NYYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKIL   82 (251)
T ss_dssp             CCCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            34589999999999999999999999999999999999999999999999999888899999999999999999999999


Q ss_pred             HHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhh
Q 024230           93 SLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSA  172 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~  172 (270)
                      +.+ +++|+||||||.....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.++...|++
T Consensus        83 ~~~-g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~a  161 (251)
T d2c07a1          83 TEH-KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSS  161 (251)
T ss_dssp             HHC-SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHH
T ss_pred             Hhc-CCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHHHHH
Confidence            999 8999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCcc
Q 024230          173 TKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT  252 (270)
Q Consensus       173 sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  252 (270)
                      ||+|+++|+|++|.|++++|||||+|+||+++|+|...+  .++..+.+....|++|+.+|+|+|+++.||+|++++|+|
T Consensus       162 sKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~--~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~it  239 (251)
T d2c07a1         162 SKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI--SEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGYIN  239 (251)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C--CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEccCCEeccccccc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCCc
Confidence            999999999999999999999999999999999998775  456677888899999999999999999999999999999


Q ss_pred             CcEEeecCCcc
Q 024230          253 GQTVCIDGGFT  263 (270)
Q Consensus       253 G~~i~vdgG~~  263 (270)
                      ||+|.||||++
T Consensus       240 G~~i~vDGG~s  250 (251)
T d2c07a1         240 GRVFVIDGGLS  250 (251)
T ss_dssp             SCEEEESTTSC
T ss_pred             CcEEEECCCcC
Confidence            99999999985

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=8.6e-60  Score=396.83  Aligned_cols=254  Identities=65%  Similarity=1.071  Sum_probs=207.2

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .++|+||++|||||++|||+++|+.|+++|++|++++|+++++++..+++...+.++.++.+|++++++++++++++.++
T Consensus         3 ~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d1xq1a_           3 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSM   82 (259)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999999988889999999999999999999999999


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                      +++++|++|||||.....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.++...|++||
T Consensus        83 ~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asK  162 (259)
T d1xq1a_          83 FGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATK  162 (259)
T ss_dssp             HTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHHH
T ss_pred             hCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccccccccccccccc
Confidence            86789999999999999999999999999999999999999999999999999899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCc
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ  254 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  254 (270)
                      +|+.+|+|++|.|++++|||||+|+||+++|+|...... ++..+......|++|+.+|+|+|++++||+|++++|+||+
T Consensus       163 aal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~-~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~iTG~  241 (259)
T d1xq1a_         163 GALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYD-DEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYITGQ  241 (259)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEECCSCC--------------------------CCGGGGHHHHHHHTSGGGTTCCSC
T ss_pred             cchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhch-HHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcCCcCc
Confidence            999999999999999999999999999999999876543 3345566778899999999999999999999999999999


Q ss_pred             EEeecCCcccccccc
Q 024230          255 TVCIDGGFTVNGFFF  269 (270)
Q Consensus       255 ~i~vdgG~~~~~~~~  269 (270)
                      +|.||||++++++.+
T Consensus       242 ~i~vDGG~s~~g~~~  256 (259)
T d1xq1a_         242 TICVDGGLTVNGFSY  256 (259)
T ss_dssp             EEECCCCEEETTEEE
T ss_pred             EEEeCCCEECCCCCC
Confidence            999999999998765

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=3.8e-59  Score=392.97  Aligned_cols=251  Identities=52%  Similarity=0.894  Sum_probs=237.0

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .++|+||++|||||++|||+++|+.|+++|++|++++|+++++++..++++..+.++.++.+|++++++++++++++.++
T Consensus         3 ~f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d2ae2a_           3 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH   82 (259)
T ss_dssp             TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHH
Confidence            47999999999999999999999999999999999999999999999999998999999999999999999999999999


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                      +++++|++|||||.....++.+.+.++|++++++|+.+++.+++.++|+|++++.|+||+++|..+..+.++...|++||
T Consensus        83 ~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asK  162 (259)
T d2ae2a_          83 FHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATK  162 (259)
T ss_dssp             TTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             hCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccccchHHHH
Confidence            85589999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCCh---hhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCc
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNG---KFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI  251 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  251 (270)
                      +|+++|+|++|.|++++|||||+|+||+++|+|.+.....+   +..+++....|++|+.+|+|++++++||+|++++|+
T Consensus       163 aal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~i  242 (259)
T d2ae2a_         163 GAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYV  242 (259)
T ss_dssp             HHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCC
Confidence            99999999999999999999999999999999876655442   344567778999999999999999999999999999


Q ss_pred             cCcEEeecCCcccc
Q 024230          252 TGQTVCIDGGFTVN  265 (270)
Q Consensus       252 ~G~~i~vdgG~~~~  265 (270)
                      |||+|.||||++.+
T Consensus       243 tG~~i~VDGG~~a~  256 (259)
T d2ae2a_         243 TGQIIYVDGGLMAN  256 (259)
T ss_dssp             CSCEEEESTTGGGC
T ss_pred             cCcEEEECCCeEee
Confidence            99999999999864

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=7e-59  Score=391.51  Aligned_cols=249  Identities=29%  Similarity=0.438  Sum_probs=235.1

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChh-HHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTET-ELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+.+ .++.+.++++..+.++.++++|++|+++++++++++.++
T Consensus         3 ~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (261)
T d1geea_           3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE   82 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4799999999999999999999999999999999999854 677888899888899999999999999999999999999


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc-EEEEecCccccccCCCChhhhhh
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAA-SIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g-~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                      + +++|+||||||.....++.+.+.++|++++++|+.+++.++++++|+|.+++.+ .||++||.++..+.++...|++|
T Consensus        83 ~-G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~~~Y~as  161 (261)
T d1geea_          83 F-GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAAS  161 (261)
T ss_dssp             H-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             h-CCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccccccccC
Confidence            9 899999999999988999999999999999999999999999999999887655 58999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccC
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG  253 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  253 (270)
                      |+|+++|+|++|.|++++|||||+|+||+++|+|.......++..+++....|++|+.+|+|+|++++||+|++++++||
T Consensus       162 Kaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~~itG  241 (261)
T d1geea_         162 KGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTG  241 (261)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             CccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCCcC
Confidence            99999999999999999999999999999999998776666777788888999999999999999999999999999999


Q ss_pred             cEEeecCCcccc
Q 024230          254 QTVCIDGGFTVN  265 (270)
Q Consensus       254 ~~i~vdgG~~~~  265 (270)
                      |+|.||||++++
T Consensus       242 ~~i~vDGG~sl~  253 (261)
T d1geea_         242 ITLFADGGMTLY  253 (261)
T ss_dssp             CEEEESTTGGGC
T ss_pred             CeEEECCCeeCC
Confidence            999999999985

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=9.2e-59  Score=389.66  Aligned_cols=246  Identities=29%  Similarity=0.477  Sum_probs=233.4

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .|+|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++++.+.++.++++|++++++++++++++.++
T Consensus         6 ~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~   85 (255)
T d1fmca_           6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK   85 (255)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999999999999999998889999999999999999999999999


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                      + +++|+||||||.....++ +.+.++|++++++|+.+++.+++.++|+|.+++.|+||++||..+..+.++...|++||
T Consensus        86 ~-g~iDilvnnAG~~~~~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~~~Y~asK  163 (255)
T d1fmca_          86 L-GKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSK  163 (255)
T ss_dssp             H-SSCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHH
T ss_pred             c-CCCCEeeeCCcCCCCCcc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccccccchhHH
Confidence            9 899999999999877766 78999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCc
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ  254 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  254 (270)
                      +|+.+|+|++|.|++++|||||+|+||+++|++..... .++..+.+....|++|+.+|+|+|+++.||+|++++|+|||
T Consensus       164 aal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~-~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~itG~  242 (255)
T d1fmca_         164 AAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVI-TPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQ  242 (255)
T ss_dssp             HHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC-CHHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccC-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCC
Confidence            99999999999999999999999999999999876654 34566777888999999999999999999999999999999


Q ss_pred             EEeecCCcc
Q 024230          255 TVCIDGGFT  263 (270)
Q Consensus       255 ~i~vdgG~~  263 (270)
                      +|.||||+.
T Consensus       243 ~i~vDGG~~  251 (255)
T d1fmca_         243 ILTVSGGGV  251 (255)
T ss_dssp             EEEESTTSC
T ss_pred             EEEECcCcc
Confidence            999999984

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4.2e-59  Score=389.09  Aligned_cols=242  Identities=29%  Similarity=0.466  Sum_probs=229.4

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      ||+||+++||||++|||+++|+.|+++|++|++++|+++.++++.+++.   .+..++.+|++++++++++++++.+++ 
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   76 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG---ANGKGLMLNVTDPASIESVLEKIRAEF-   76 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG---GGEEEEECCTTCHHHHHHHHHHHHHHT-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC---CCCcEEEEEecCHHHhhhhhhhhhccc-
Confidence            6899999999999999999999999999999999999999988887774   467889999999999999999999999 


Q ss_pred             CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHH
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGA  176 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaa  176 (270)
                      +++|+||||||.....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.++...|++||+|
T Consensus        77 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaa  156 (243)
T d1q7ba_          77 GEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAG  156 (243)
T ss_dssp             CSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHH
T ss_pred             CCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHHHHHHHHH
Confidence            89999999999999999999999999999999999999999999999999989999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEE
Q 024230          177 MNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTV  256 (270)
Q Consensus       177 l~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i  256 (270)
                      +++|+|++|.|++++|||||+|+||+++|+|.+.+  .+...+.+....|++|+.+|+|+|+++.||+|++++++|||+|
T Consensus       157 l~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~--~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itGq~i  234 (243)
T d1q7ba_         157 LIGFSKSLAREVASRGITVNVVAPGFIETDMTRAL--SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  234 (243)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS--CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHHHHhCccCeEEEEEecceEechhhhhh--hhhHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCCcCCeE
Confidence            99999999999999999999999999999988765  3455667788899999999999999999999999999999999


Q ss_pred             eecCCccc
Q 024230          257 CIDGGFTV  264 (270)
Q Consensus       257 ~vdgG~~~  264 (270)
                      .||||+++
T Consensus       235 ~vdGG~~~  242 (243)
T d1q7ba_         235 HVNGGMYM  242 (243)
T ss_dssp             EESTTSSC
T ss_pred             EECCCeEe
Confidence            99999986

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=4.2e-58  Score=384.03  Aligned_cols=245  Identities=29%  Similarity=0.406  Sum_probs=214.0

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      .|+||++|||||++|||+++|+.|+++|++|++++|++++  ...+.++..+.++.++.+|++|+++++++++++.+++ 
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~--~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~-   78 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTF-   78 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCH--HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH--HHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHc-
Confidence            4899999999999999999999999999999999998764  3344566678899999999999999999999999999 


Q ss_pred             CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHH
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGA  176 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaa  176 (270)
                      +++|+||||||.....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||+++|..+..+.++...|++||+|
T Consensus        79 G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaa  158 (247)
T d2ew8a1          79 GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAA  158 (247)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcccccchhhhcc
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEE
Q 024230          177 MNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTV  256 (270)
Q Consensus       177 l~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i  256 (270)
                      +.+|+|++|.|++++|||||+|+||+++|+|..................|++|+.+|+|++++++||+|++++|+|||+|
T Consensus       159 l~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~l~r~~~pedvA~~v~fL~S~~s~~itG~~i  238 (247)
T d2ew8a1         159 NIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDASFITGQTL  238 (247)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTTSSSCSCCCTHHHHHHHHHHTSGGGTTCCSCEE
T ss_pred             HHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHHHHHHhccCCCCCCHHHHHHHHHHHhCchhcCCcCCeE
Confidence            99999999999999999999999999999998765433332222333458899999999999999999999999999999


Q ss_pred             eecCCccc
Q 024230          257 CIDGGFTV  264 (270)
Q Consensus       257 ~vdgG~~~  264 (270)
                      .||||+..
T Consensus       239 ~vDGG~~~  246 (247)
T d2ew8a1         239 AVDGGMVR  246 (247)
T ss_dssp             EESSSCCC
T ss_pred             EECCCEec
Confidence            99999875

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=6.7e-58  Score=385.02  Aligned_cols=249  Identities=29%  Similarity=0.418  Sum_probs=230.4

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK--GLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+++.+++..+++...  +.++.++.+|++|+++++++++++.++
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   80 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   80 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence            489999999999999999999999999999999999999999888887654  467999999999999999999999999


Q ss_pred             cCCcccEEEECCCCC-CCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhh
Q 024230           95 FNGKLNIFVNNVGTS-VLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        95 ~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                      + +++|+||||||+. ...++.+.+.++|++++++|+.+++.+++++.|+|++++.|+||+++|..+..+.++...|++|
T Consensus        81 ~-G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~as  159 (258)
T d1iy8a_          81 F-GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAA  159 (258)
T ss_dssp             H-SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHH
T ss_pred             h-CCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCchHHHHH
Confidence            9 8999999999975 4678899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC------ChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCC
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG------NGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA  247 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (270)
                      |+|+.+|+|+||.|++++|||||+|+||+++|+|......      .....+.+....|++|+.+|+|+|++++||+|++
T Consensus       160 Kaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fL~S~~  239 (258)
T d1iy8a_         160 KHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDD  239 (258)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence            9999999999999999999999999999999998755422      1345566778899999999999999999999999


Q ss_pred             CCCccCcEEeecCCccccc
Q 024230          248 ASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       248 ~~~~~G~~i~vdgG~~~~~  266 (270)
                      ++++|||+|.||||++..|
T Consensus       240 s~~itG~~i~VDGG~saa~  258 (258)
T d1iy8a_         240 ASYVNATVVPIDGGQSAAY  258 (258)
T ss_dssp             GTTCCSCEEEESTTTTTBC
T ss_pred             hcCCcCceEEcCcchhccC
Confidence            9999999999999998654

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=3.2e-57  Score=380.87  Aligned_cols=251  Identities=55%  Similarity=0.929  Sum_probs=232.8

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      ++|+||++|||||++|||+++|++|+++|++|++++|++++++++.++++..+..++++.+|++++++++++++++.+++
T Consensus         2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   81 (258)
T d1ae1a_           2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF   81 (258)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHh
Confidence            78999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKG  175 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKa  175 (270)
                      ++++|++|||||.....++.+++.++|++++++|+.+++.+++++.|+|.+++.|+||+++|..+..+.++...|+++|+
T Consensus        82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~  161 (258)
T d1ae1a_          82 DGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKG  161 (258)
T ss_dssp             TSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccchhHHHHHH
Confidence            67899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC----hhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCc
Q 024230          176 AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN----GKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI  251 (270)
Q Consensus       176 al~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  251 (270)
                      |+++|+|++|+|++++|||||+|+||+++|+|.......    .+..+.+....|++|+.+|+|+|+++.||+|++++++
T Consensus       162 al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plgR~~~pediA~~v~fL~S~~s~~i  241 (258)
T d1ae1a_         162 AINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASYI  241 (258)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhCCC
Confidence            999999999999999999999999999999998776542    4566677888999999999999999999999999999


Q ss_pred             cCcEEeecCCccccc
Q 024230          252 TGQTVCIDGGFTVNG  266 (270)
Q Consensus       252 ~G~~i~vdgG~~~~~  266 (270)
                      ||++|.||||++.+|
T Consensus       242 tG~~i~vDGG~s~~g  256 (258)
T d1ae1a_         242 TGQIIWADGGFTANG  256 (258)
T ss_dssp             CSCEEEESTTGGGCS
T ss_pred             cCcEEEeCCCeeccC
Confidence            999999999999876

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.9e-57  Score=378.85  Aligned_cols=241  Identities=28%  Similarity=0.407  Sum_probs=223.5

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      |+|+||++|||||++|||+++|++|+++|++|++++|+++.+++..+++     +..++.+|++|+++++++++++.+++
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~   75 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-----GAHPVVMDVADPASVERGFAEALAHL   75 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----TCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCeEEEEecCCHHHHHHHHHHHHHhc
Confidence            6799999999999999999999999999999999999999888776544     35678999999999999999999999


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKG  175 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKa  175 (270)
                       +++|+||||||.....++.+.+.++|++++++|+.+++.++++++|+|.+++.+.++++|| .+..+.++...|++||+
T Consensus        76 -g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss-~~~~~~~~~~~Y~asKa  153 (242)
T d1ulsa_          76 -GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTAS-RVYLGNLGQANYAASMA  153 (242)
T ss_dssp             -SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECC-GGGGCCTTCHHHHHHHH
T ss_pred             -CCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeecc-ccccCCCCCcchHHHHH
Confidence             8999999999999899999999999999999999999999999999999888777777766 46778889999999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcE
Q 024230          176 AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT  255 (270)
Q Consensus       176 al~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  255 (270)
                      |+++|+|++|.|++++|||||+|+||+++|+|....  .+...++.....|++|+.+|+|+++++.||+|++++|+||++
T Consensus       154 al~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~--~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~s~~itG~~  231 (242)
T d1ulsa_         154 GVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV--PEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQV  231 (242)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS--CHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcC--CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhchhhCCCCCcE
Confidence            999999999999999999999999999999998765  456667788899999999999999999999999999999999


Q ss_pred             EeecCCcccc
Q 024230          256 VCIDGGFTVN  265 (270)
Q Consensus       256 i~vdgG~~~~  265 (270)
                      |.||||+++.
T Consensus       232 i~vDGG~t~g  241 (242)
T d1ulsa_         232 LFVDGGRTIG  241 (242)
T ss_dssp             EEESTTTTTT
T ss_pred             EEECCCccCC
Confidence            9999999875

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=1.6e-57  Score=383.55  Aligned_cols=246  Identities=28%  Similarity=0.446  Sum_probs=220.0

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh-hHHHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTE-TELNECIHHLQM-KGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~-~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      |+||++|||||++|||+++|++|+++|++|++++|++ +.++++.+++.+ .+.++.++.+|++|+++++++++++.+++
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            7999999999999999999999999999999999974 567777777754 46789999999999999999999999999


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKG  175 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKa  175 (270)
                       +++|+||||||.....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||+++|..+..+.++...|++||+
T Consensus        82 -G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKa  160 (260)
T d1x1ta1          82 -GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKH  160 (260)
T ss_dssp             -SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             -CCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCcchhhhhhh
Confidence             8999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC----------hhhHHHHhhcCCCCCCCChHhHHHHHHHHhC
Q 024230          176 AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN----------GKFVDEVKSRTPMGRLGEPKEVSSLVAFLCM  245 (270)
Q Consensus       176 al~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (270)
                      |+++|+|++|.|++++|||||+|+||+++|+|.......          ....+.+....|++|+.+|+|+|++++||+|
T Consensus       161 al~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S  240 (260)
T d1x1ta1         161 GVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLAS  240 (260)
T ss_dssp             HHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHHHHS
T ss_pred             hHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            999999999999999999999999999999998665321          1122335677899999999999999999999


Q ss_pred             CCCCCccCcEEeecCCccc
Q 024230          246 PAASYITGQTVCIDGGFTV  264 (270)
Q Consensus       246 ~~~~~~~G~~i~vdgG~~~  264 (270)
                      +.++|+|||+|.||||++.
T Consensus       241 ~~a~~itG~~i~vDGG~ta  259 (260)
T d1x1ta1         241 DAAAQITGTTVSVDGGWTA  259 (260)
T ss_dssp             GGGTTCCSCEEEESTTGGG
T ss_pred             hhhCCCcCCEEEECcchhc
Confidence            9999999999999999874

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=1.4e-57  Score=382.87  Aligned_cols=246  Identities=25%  Similarity=0.385  Sum_probs=227.7

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      |.|+||++|||||++|||+++|+.|+++|++|++++|+++.+++..+++   +.++.++.+|++++++++++++++.+++
T Consensus         1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~---~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   77 (256)
T d1k2wa_           1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI---GPAACAIALDVTDQASIDRCVAELLDRW   77 (256)
T ss_dssp             CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCceEEEEeeCCCHHHHHHHHHHHHHHh
Confidence            6799999999999999999999999999999999999999988887766   5688999999999999999999999999


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEecCccccccCCCChhhhhhH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRAS-GAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                       +++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|+|.++ +.|+||++||..+..+.++...|++||
T Consensus        78 -g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK  156 (256)
T d1k2wa_          78 -GSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATK  156 (256)
T ss_dssp             -SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             -CCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccchhhhh
Confidence             899999999999989999999999999999999999999999999987655 468999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC---------ChhhHHHHhhcCCCCCCCChHhHHHHHHHHhC
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG---------NGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCM  245 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (270)
                      +|+++|+|++|.|++++|||||+|+||+++|+|......         .....+++....|++|+.+|+|+|++++||+|
T Consensus       157 aal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA~~v~fL~S  236 (256)
T d1k2wa_         157 AAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLAT  236 (256)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHHHHHHHTTS
T ss_pred             hHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            999999999999999999999999999999998754421         23455667778999999999999999999999


Q ss_pred             CCCCCccCcEEeecCCcccc
Q 024230          246 PAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       246 ~~~~~~~G~~i~vdgG~~~~  265 (270)
                      ++++|+|||+|.||||.+++
T Consensus       237 ~~a~~iTG~~i~vDGG~~ms  256 (256)
T d1k2wa_         237 PEADYIVAQTYNVDGGNWMS  256 (256)
T ss_dssp             GGGTTCCSCEEEESTTSSCC
T ss_pred             chhCCccCceEEECcchhhC
Confidence            99999999999999998764

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=8e-58  Score=384.76  Aligned_cols=244  Identities=30%  Similarity=0.492  Sum_probs=229.8

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      ||++|||||++|||+++|+.|+++|++|++++|+++.+++..++++..+.++.++.+|++|+++++++++++.+++ +++
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~-g~i   80 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY-GPV   80 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT-CSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHh-CCC
Confidence            8999999999999999999999999999999999999999999999988899999999999999999999999999 899


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHH--HHhcCCcEEEEecCccccccCCCChhhhhhHHHH
Q 024230          100 NIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPL--LRASGAASIVLMSSALGIVSANVGTVYSATKGAM  177 (270)
Q Consensus       100 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal  177 (270)
                      |+||||||....+++.+++.++|++++++|+.+++.++++++|+  |.+++.|+||+++|..+..+.++...|++||+|+
T Consensus        81 DilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~~~Y~asKaal  160 (257)
T d2rhca1          81 DVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGV  160 (257)
T ss_dssp             SEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             CEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccchhHHHHHHHH
Confidence            99999999998999999999999999999999999999999997  5667778999999999999999999999999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEecCcccCCCCcccc---------CChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCC
Q 024230          178 NQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLL---------GNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAA  248 (270)
Q Consensus       178 ~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  248 (270)
                      .+|+|+||.|++++|||||+|+||+++|+|...+.         ..++..+.+....|++|+.+|+|++++++||+|+++
T Consensus       161 ~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR~~~pedia~~v~fL~S~~s  240 (257)
T d2rhca1         161 VGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGA  240 (257)
T ss_dssp             HHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHTSGGG
T ss_pred             HHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence            99999999999999999999999999999875542         124556677888999999999999999999999999


Q ss_pred             CCccCcEEeecCCccc
Q 024230          249 SYITGQTVCIDGGFTV  264 (270)
Q Consensus       249 ~~~~G~~i~vdgG~~~  264 (270)
                      +++|||+|.||||++.
T Consensus       241 ~~itG~~i~vDGG~~~  256 (257)
T d2rhca1         241 AAVTAQALNVCGGLGN  256 (257)
T ss_dssp             TTCCSCEEEESTTCCC
T ss_pred             cCCcCceEEECcCccc
Confidence            9999999999999864

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=2.4e-57  Score=378.64  Aligned_cols=241  Identities=28%  Similarity=0.445  Sum_probs=228.1

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEe-eCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTC-SRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      ++||||||++|||+++|++|+++|++|++. .|+++.++++.++++..+.++.++.+|++|+++++++++++.+++ +++
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~i   80 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAW-GTI   80 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHS-SCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHc-CCC
Confidence            589999999999999999999999999886 567778888999998888999999999999999999999999999 899


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHHHH
Q 024230          100 NIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQ  179 (270)
Q Consensus       100 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal~~  179 (270)
                      |+||||||.....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.++...|++||+|+.+
T Consensus        81 DiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~  160 (244)
T d1edoa_          81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIG  160 (244)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHH
T ss_pred             CccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHh-CCCCCCccCcEEee
Q 024230          180 LAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLC-MPAASYITGQTVCI  258 (270)
Q Consensus       180 ~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~-s~~~~~~~G~~i~v  258 (270)
                      |+|+||.|++++|||||+|+||+++|+|...+  .++..+.+....|++|+.+|+|+|+++.||+ |++++|+|||+|.+
T Consensus       161 ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~--~~~~~~~~~~~~pl~R~~~p~dvA~~v~fLa~S~~a~~itG~~i~v  238 (244)
T d1edoa_         161 FSKTAAREGASRNINVNVVCPGFIASDMTAKL--GEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFTI  238 (244)
T ss_dssp             HHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT--CHHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSGGGGCCSCEEEE
T ss_pred             ChHHHHHHHhhhCcEEEEEecceeccHHHHHh--hHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHCCchhcCCcCCeEEe
Confidence            99999999999999999999999999988765  4556677888899999999999999999997 89999999999999


Q ss_pred             cCCccc
Q 024230          259 DGGFTV  264 (270)
Q Consensus       259 dgG~~~  264 (270)
                      |||+++
T Consensus       239 dGG~si  244 (244)
T d1edoa_         239 DGGIAI  244 (244)
T ss_dssp             STTTTC
T ss_pred             CCCeeC
Confidence            999875

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=6e-57  Score=375.75  Aligned_cols=237  Identities=30%  Similarity=0.419  Sum_probs=222.9

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      .|+||++|||||++|||+++|+.|+++|++|++++|++++++++.+++.   .++.++.+|++|+++++++++++.+++ 
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   78 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA---DAARYVHLDVTQPAQWKAAVDTAVTAF-   78 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG---GGEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh---CcceEEEeecCCHHHHHHHHHHHHHHh-
Confidence            5899999999999999999999999999999999999999888877764   478889999999999999999999999 


Q ss_pred             CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHH
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGA  176 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaa  176 (270)
                      +++|+||||||.....++.+.+.++|++++++|+.+++.+++.+.|+|++++.|+||++||..+..+.++...|++||+|
T Consensus        79 g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaa  158 (244)
T d1nffa_          79 GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFA  158 (244)
T ss_dssp             SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             CCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccccchhhHHHH
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEE
Q 024230          177 MNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTV  256 (270)
Q Consensus       177 l~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i  256 (270)
                      +++|+|++|.|++++|||||+|+||+++|+|.......       ..+.|++|+.+|+|+|+++.||+|++++++|||+|
T Consensus       159 l~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~-------~~~~pl~R~~~p~diA~~v~fL~s~~s~~itG~~i  231 (244)
T d1nffa_         159 VRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPED-------IFQTALGRAAEPVEVSNLVVYLASDESSYSTGAEF  231 (244)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTT-------CSCCSSSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHH-------HHhccccCCCCHHHHHHHHHHHhChhhCCCcCCEE
Confidence            99999999999999999999999999999987554222       34578999999999999999999999999999999


Q ss_pred             eecCCccc
Q 024230          257 CIDGGFTV  264 (270)
Q Consensus       257 ~vdgG~~~  264 (270)
                      .||||+..
T Consensus       232 ~vDGG~~a  239 (244)
T d1nffa_         232 VVDGGTVA  239 (244)
T ss_dssp             EESTTGGG
T ss_pred             EECCCeec
Confidence            99999975

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=9.8e-58  Score=382.70  Aligned_cols=243  Identities=31%  Similarity=0.411  Sum_probs=225.4

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++++++..+++   +.++.++.+|++++++++++++++.+++ 
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   77 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEF-   77 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCceEEEEcccCCHHHHHHHHHHHHHHc-
Confidence            699999999999999999999999999999999999998887766654   5679999999999999999999999999 


Q ss_pred             CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHH
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGA  176 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaa  176 (270)
                      +++|+||||||.....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.++...|++||+|
T Consensus        78 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaa  157 (254)
T d1hdca_          78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWG  157 (254)
T ss_dssp             SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccchhhHHHHHHH
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCC-ChHhHHHHHHHHhCCCCCCccCcE
Q 024230          177 MNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLG-EPKEVSSLVAFLCMPAASYITGQT  255 (270)
Q Consensus       177 l~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~dva~~~~~l~s~~~~~~~G~~  255 (270)
                      +.+|+|+||.|++++|||||+|+||+++|+|......  +..+......|++|+. .|+|+|++++||+|++++|+|||+
T Consensus       158 l~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~--~~~~~~~~~~pl~R~g~~PedvA~~v~fL~S~~a~~itG~~  235 (254)
T d1hdca_         158 VRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGI--RQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAE  235 (254)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTC--CCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCH--HHHHHHHhCCCCCCCCCCHHHHHHHHHHHhchhhCCCCCce
Confidence            9999999999999999999999999999998765432  2334455677899997 699999999999999999999999


Q ss_pred             EeecCCcccc
Q 024230          256 VCIDGGFTVN  265 (270)
Q Consensus       256 i~vdgG~~~~  265 (270)
                      |.|||||+..
T Consensus       236 i~vDGG~t~g  245 (254)
T d1hdca_         236 LAVDGGWTTG  245 (254)
T ss_dssp             EEESTTTTTS
T ss_pred             EEeCCCccCC
Confidence            9999999874

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=4.3e-57  Score=380.73  Aligned_cols=244  Identities=27%  Similarity=0.437  Sum_probs=228.2

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.++++..+.++.++.+|++++++++++++++.+++ 
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   80 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF-   80 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh-
Confidence            4899999999999999999999999999999999999999999999999888899999999999999999999999999 


Q ss_pred             CcccEEEECCCCCC-CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHH
Q 024230           97 GKLNIFVNNVGTSV-LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKG  175 (270)
Q Consensus        97 ~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKa  175 (270)
                      +++|++|||||... ..++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++||+
T Consensus        81 g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKa  160 (260)
T d1zema1          81 GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKG  160 (260)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHH
T ss_pred             CCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcchHHHHHHHH
Confidence            89999999999864 57899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEecCcccCCCCccc-------------c-CChhhHHHHhhcCCCCCCCChHhHHHHHH
Q 024230          176 AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPL-------------L-GNGKFVDEVKSRTPMGRLGEPKEVSSLVA  241 (270)
Q Consensus       176 al~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~-------------~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~  241 (270)
                      |+++|+|++|.|++++|||||+|+||+++|+|....             . ......+.+....|++|+.+|+|+|+++.
T Consensus       161 al~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~  240 (260)
T d1zema1         161 AIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVA  240 (260)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHHH
T ss_pred             HHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            999999999999999999999999999999975321             1 12344556778899999999999999999


Q ss_pred             HHhCCCCCCccCcEEeecCC
Q 024230          242 FLCMPAASYITGQTVCIDGG  261 (270)
Q Consensus       242 ~l~s~~~~~~~G~~i~vdgG  261 (270)
                      ||+|++++|+|||+|.||||
T Consensus       241 fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         241 FLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             HHHSGGGTTCCSCEEEESCC
T ss_pred             HHhCchhcCccCCeEEeCCC
Confidence            99999999999999999998

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=6e-57  Score=378.91  Aligned_cols=244  Identities=27%  Similarity=0.376  Sum_probs=228.0

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      |++|||||++|||+++|++|+++|++|++++|+++.++++.+++++.+.++.++.+|++|+++++++++++.+++ +++|
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD   80 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTL-GGFD   80 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHT-TCCC
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh-CCcc
Confidence            778999999999999999999999999999999999999999999988999999999999999999999999999 8999


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCccccccCCCChhhhhhHHHHHH
Q 024230          101 IFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIVSANVGTVYSATKGAMNQ  179 (270)
Q Consensus       101 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~~~~~~~~~~~y~~sKaal~~  179 (270)
                      +||||||....+++.+.++++|++++++|+.++++++++++|+|.+++ .++||++||..+..+.++...|++||+|+++
T Consensus        81 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~  160 (255)
T d1gega_          81 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRG  160 (255)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred             EEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccchhCHHHHHh
Confidence            999999999999999999999999999999999999999999987765 5789999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEecCcccCCCCccccC---------ChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCC
Q 024230          180 LAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG---------NGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY  250 (270)
Q Consensus       180 ~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  250 (270)
                      |+|++|.|++++|||||+|+||+++|+|...+..         .....+++....|++|+.+|+|+|++++||+|+++++
T Consensus       161 ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~~  240 (255)
T d1gega_         161 LTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDY  240 (255)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             hHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCC
Confidence            9999999999999999999999999998755421         2334556777899999999999999999999999999


Q ss_pred             ccCcEEeecCCcccc
Q 024230          251 ITGQTVCIDGGFTVN  265 (270)
Q Consensus       251 ~~G~~i~vdgG~~~~  265 (270)
                      +||++|.||||+.++
T Consensus       241 itG~~i~vDGG~~~n  255 (255)
T d1gega_         241 MTGQSLLIDGGMVFN  255 (255)
T ss_dssp             CCSCEEEESSSSSCC
T ss_pred             ccCcEEEecCCEEeC
Confidence            999999999999864

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=6.2e-57  Score=376.85  Aligned_cols=243  Identities=28%  Similarity=0.435  Sum_probs=220.2

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+++..+ ..+++   +  ..++++|++|+++++++++++.+++ 
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~-~~~~~---~--~~~~~~Dv~~~~~v~~~~~~~~~~~-   74 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE-VAEAI---G--GAFFQVDLEDERERVRFVEEAAYAL-   74 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH-HHHHH---T--CEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHc---C--CeEEEEeCCCHHHHHHHHHHHHHhc-
Confidence            489999999999999999999999999999999999987643 33333   2  3467899999999999999999999 


Q ss_pred             CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHH
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGA  176 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaa  176 (270)
                      +++|+||||||....+++.+.+.++|++++++|+.++++++++++|+|++++.|+||+++|..+..+.++...|++||+|
T Consensus        75 G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaa  154 (248)
T d2d1ya1          75 GRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGG  154 (248)
T ss_dssp             SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHH
T ss_pred             CCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccccchhHHHHHH
Confidence            89999999999999999999999999999999999999999999999999989999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC----ChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCcc
Q 024230          177 MNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG----NGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYIT  252 (270)
Q Consensus       177 l~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  252 (270)
                      +++|+|++|+|++++|||||+|+||+++|+|......    .....+.+....|++|+.+|+|+++++.||+|++++|+|
T Consensus       155 l~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~s~~it  234 (248)
T d2d1ya1         155 LVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFIT  234 (248)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCC
Confidence            9999999999999999999999999999998755432    233455677788999999999999999999999999999


Q ss_pred             CcEEeecCCccccc
Q 024230          253 GQTVCIDGGFTVNG  266 (270)
Q Consensus       253 G~~i~vdgG~~~~~  266 (270)
                      ||+|.||||++..+
T Consensus       235 G~~i~vDGG~tas~  248 (248)
T d2d1ya1         235 GAILPVDGGMTASF  248 (248)
T ss_dssp             SCEEEESTTGGGBC
T ss_pred             CcEEEcCcCccccC
Confidence            99999999998653

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=1.2e-56  Score=376.12  Aligned_cols=245  Identities=28%  Similarity=0.473  Sum_probs=226.4

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++.. +.++.++.+|++|+++++++++++.+++ 
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   80 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT-PDQIQFFQHDSSDEDGWTKLFDATEKAF-   80 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC-CCcEEEEEccCCCHHHHHHHHHHHHHHh-
Confidence            48999999999999999999999999999999999999999988888754 5589999999999999999999999999 


Q ss_pred             CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc-EEEEecCccccccCCCChhhhhhHH
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAA-SIVLMSSALGIVSANVGTVYSATKG  175 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g-~ii~iss~~~~~~~~~~~~y~~sKa  175 (270)
                      +++|+||||||....+++.+.+.++|++++++|+.+++.++++++|+|++++.| +||+++|..+..+.++...|++||+
T Consensus        81 G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~asKa  160 (251)
T d1zk4a1          81 GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKG  160 (251)
T ss_dssp             SSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHHHHHH
Confidence            899999999999999999999999999999999999999999999999988754 8999999999999999999999999


Q ss_pred             HHHHHHHHHHHH--HccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccC
Q 024230          176 AMNQLAKNLACE--WAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG  253 (270)
Q Consensus       176 al~~~~~sla~e--l~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  253 (270)
                      |+.+|+|++|.|  ++++|||||+|+||+++|+|...... .+.........|++|+.+|+|+++++.||+|++++|+||
T Consensus       161 al~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~-~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG  239 (251)
T d1zk4a1         161 AVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPG-AEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFATG  239 (251)
T ss_dssp             HHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTT-HHHHHTSTTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCC-HHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhCCCcC
Confidence            999999999999  56889999999999999998766532 333444556789999999999999999999999999999


Q ss_pred             cEEeecCCccc
Q 024230          254 QTVCIDGGFTV  264 (270)
Q Consensus       254 ~~i~vdgG~~~  264 (270)
                      ++|.||||++.
T Consensus       240 ~~i~vDGG~ta  250 (251)
T d1zk4a1         240 SEFVVDGGYTA  250 (251)
T ss_dssp             CEEEESTTGGG
T ss_pred             cEEEECccccc
Confidence            99999999974

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=3.8e-57  Score=375.68  Aligned_cols=235  Identities=28%  Similarity=0.441  Sum_probs=212.3

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+++.+           .++..+.+|++|+++++++++++.+++
T Consensus         3 psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-----------~~~~~~~~Dv~~~~~v~~~~~~~~~~~   71 (237)
T d1uzma1           3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP-----------KGLFGVEVDVTDSDAVDRAFTAVEEHQ   71 (237)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC-----------TTSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh-----------cCceEEEEecCCHHHHHHHHHHHHHhc
Confidence            579999999999999999999999999999999999987653           356789999999999999999999999


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKG  175 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKa  175 (270)
                       +++|+||||||.....++.+.+.|+|++++++|+.+++.+++.++|+|++++.|+||++||..+..+.++...|++||+
T Consensus        72 -g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKa  150 (237)
T d1uzma1          72 -GPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKA  150 (237)
T ss_dssp             -SSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHH
T ss_pred             -CCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcccHHHHHHHH
Confidence             8999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcE
Q 024230          176 AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQT  255 (270)
Q Consensus       176 al~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  255 (270)
                      |+++|+|+++.|++++|||||+|+||+++|+|.+.+  .+...+......|++|+.+|||+|+++.||+|++++|+|||+
T Consensus       151 al~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~--~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG~~  228 (237)
T d1uzma1         151 GVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL--DERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAV  228 (237)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS--CHHHHHHHGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhcc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCe
Confidence            999999999999999999999999999999988765  455566778889999999999999999999999999999999


Q ss_pred             EeecCCccc
Q 024230          256 VCIDGGFTV  264 (270)
Q Consensus       256 i~vdgG~~~  264 (270)
                      |.+|||+++
T Consensus       229 i~vdGG~~m  237 (237)
T d1uzma1         229 IPVDGGMGM  237 (237)
T ss_dssp             EEESTTTTC
T ss_pred             EEECCCCCC
Confidence            999999875

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-56  Score=375.44  Aligned_cols=244  Identities=30%  Similarity=0.457  Sum_probs=222.0

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      ..|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++    .++.++.+|++|+++++++++++.+++
T Consensus         2 ~rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~----~~~~~~~~Dvs~~~~v~~~~~~~~~~~   77 (250)
T d1ydea1           2 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL----PGAVFILCDVTQEDDVKTLVSETIRRF   77 (250)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----TTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----CCCeEEEccCCCHHHHHHHHHHHHHhc
Confidence            4689999999999999999999999999999999999999888776654    357889999999999999999999999


Q ss_pred             CCcccEEEECCCCCC-CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           96 NGKLNIFVNNVGTSV-LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        96 ~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                       +++|+||||||... ..++.+.+.++|++++++|+.+++.++++++|+|++++ |+||++||..+..+.++...|++||
T Consensus        78 -g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~Ii~isS~~~~~~~~~~~~Y~asK  155 (250)
T d1ydea1          78 -GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ-GNVINISSLVGAIGQAQAVPYVATK  155 (250)
T ss_dssp             -SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred             -CCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC-CCCcccccccccccccCcchhHHHH
Confidence             89999999999764 56778999999999999999999999999999998764 8999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC----hhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCC
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN----GKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY  250 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  250 (270)
                      +|+++|+|++|.|++++|||||+|+||+++|+|.+.....    ....++.....|++|+.+|+|+++++.||+|+ ++|
T Consensus       156 aal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eva~~v~fL~Sd-a~~  234 (250)
T d1ydea1         156 GAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-ANF  234 (250)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHHH-CTT
T ss_pred             hhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc-cCC
Confidence            9999999999999999999999999999999987654322    23455566678999999999999999999996 899


Q ss_pred             ccCcEEeecCCccccc
Q 024230          251 ITGQTVCIDGGFTVNG  266 (270)
Q Consensus       251 ~~G~~i~vdgG~~~~~  266 (270)
                      +|||+|.||||+++.+
T Consensus       235 itG~~i~vDGG~~lG~  250 (250)
T d1ydea1         235 CTGIELLVTGGAELGY  250 (250)
T ss_dssp             CCSCEEEESTTTTSCC
T ss_pred             CcCCeEEECCCcccCC
Confidence            9999999999999864

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.2e-56  Score=373.85  Aligned_cols=240  Identities=28%  Similarity=0.423  Sum_probs=223.1

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      |+|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.    .+.++.+|++|+++++++++    ++
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~----~~~~~~~Dv~~~~~v~~~~~----~~   72 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP----GIEPVCVDLGDWDATEKALG----GI   72 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHT----TC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC----CCeEEEEeCCCHHHHHHHHH----Hc
Confidence            68999999999999999999999999999999999999998887776653    46788999999999877665    45


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEecCccccccCCCChhhhhhH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRAS-GAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                       +++|+||||||.....++.+.+.++|++.+++|+.+++.+++.+.|+|.++ ..|+||+++|..+..+.++...|++||
T Consensus        73 -g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK  151 (242)
T d1cyda_          73 -GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTK  151 (242)
T ss_dssp             -CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             -CCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCccccccchH
Confidence             899999999999989999999999999999999999999999999987554 568999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCc
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ  254 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  254 (270)
                      +|+.+|+|++|.|++++|||||+|+||+++|+|.......++..+.+....|++|+.+|+|+++++.||+|++++|+|||
T Consensus       152 aal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeva~~v~fL~S~~s~~itG~  231 (242)
T d1cyda_         152 GAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSGG  231 (242)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSS
T ss_pred             HHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCcCCc
Confidence            99999999999999999999999999999999988877777888888899999999999999999999999999999999


Q ss_pred             EEeecCCccc
Q 024230          255 TVCIDGGFTV  264 (270)
Q Consensus       255 ~i~vdgG~~~  264 (270)
                      +|.|||||+-
T Consensus       232 ~i~vDGG~~a  241 (242)
T d1cyda_         232 GILVDAGYLA  241 (242)
T ss_dssp             EEEESTTGGG
T ss_pred             eEEeCcchhc
Confidence            9999999874

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=2.3e-55  Score=371.88  Aligned_cols=251  Identities=28%  Similarity=0.419  Sum_probs=225.7

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      .|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++... ..+.++.+|++|+++++++++++.+++ 
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   80 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP-DVISFVHCDVTKDEDVRNLVDTTIAKH-   80 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-TTEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCC-CceEEEEccCCCHHHHHHHHHHHHHHc-
Confidence            689999999999999999999999999999999999999999999988654 457788999999999999999999999 


Q ss_pred             CcccEEEECCCCCCCC--CCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCC-hhhhhh
Q 024230           97 GKLNIFVNNVGTSVLK--PTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSAT  173 (270)
Q Consensus        97 ~~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~-~~y~~s  173 (270)
                      +++|++|||||.....  .+.+.+.++|++++++|+.+++.++|+++|+|.+++.|+||+++|..+..+.++. ..|++|
T Consensus        81 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~~Y~as  160 (268)
T d2bgka1          81 GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTAT  160 (268)
T ss_dssp             SCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHH
T ss_pred             CCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccccccccchh
Confidence            8999999999986654  4678999999999999999999999999999999999999999999998876654 589999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCCh-hhHHHH--hhcCCCCCCCChHhHHHHHHHHhCCCCCC
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNG-KFVDEV--KSRTPMGRLGEPKEVSSLVAFLCMPAASY  250 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~dva~~~~~l~s~~~~~  250 (270)
                      |+|+++|+|++|.|++++|||||+|+||+++|+|........ ...++.  ....|.+|+.+|+|+|++++||+|++++|
T Consensus       161 Kaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~  240 (268)
T d2bgka1         161 KHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKY  240 (268)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCHHHHHHHHHHHhChhhCC
Confidence            999999999999999999999999999999999988765432 223322  23457889999999999999999999999


Q ss_pred             ccCcEEeecCCcccccccc
Q 024230          251 ITGQTVCIDGGFTVNGFFF  269 (270)
Q Consensus       251 ~~G~~i~vdgG~~~~~~~~  269 (270)
                      +|||+|.||||++...+.|
T Consensus       241 itGq~i~VDGG~t~~~p~~  259 (268)
T d2bgka1         241 VSGLNLVIDGGYTRTNPAF  259 (268)
T ss_dssp             CCSCEEEESTTGGGCCTHH
T ss_pred             ccCceEEECcCcccCCCCC
Confidence            9999999999998876654

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.6e-56  Score=370.96  Aligned_cols=240  Identities=27%  Similarity=0.415  Sum_probs=222.6

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .+.|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.    .+.++.+|++|+++++++++    +
T Consensus         2 ~~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~----~   73 (244)
T d1pr9a_           2 ELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----GIEPVCVDLGDWEATERALG----S   73 (244)
T ss_dssp             CCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHT----T
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC----CCeEEEEeCCCHHHHHHHHH----H
Confidence            357999999999999999999999999999999999999999888776653    46788999999999887765    4


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCcEEEEecCccccccCCCChhhhhh
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLR-ASGAASIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~-~~~~g~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                      + +++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|. +++.|+||+++|..+..+.++...|++|
T Consensus        74 ~-g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~as  152 (244)
T d1pr9a_          74 V-GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCST  152 (244)
T ss_dssp             C-CCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             h-CCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchhhhhhh
Confidence            5 8999999999999999999999999999999999999999999999765 4567999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccC
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG  253 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  253 (270)
                      |+|+++|+|++|.|++++|||||+|+||+++|+|.+.........+.+....|++|+.+|+|+|+++.||+|+.++|+||
T Consensus       153 Kaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~~itG  232 (244)
T d1pr9a_         153 KGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTG  232 (244)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCcCC
Confidence            99999999999999999999999999999999998887777777788888999999999999999999999999999999


Q ss_pred             cEEeecCCcc
Q 024230          254 QTVCIDGGFT  263 (270)
Q Consensus       254 ~~i~vdgG~~  263 (270)
                      |+|.||||++
T Consensus       233 ~~i~vDGG~~  242 (244)
T d1pr9a_         233 STLPVEGGFW  242 (244)
T ss_dssp             CEEEESTTGG
T ss_pred             cEEEECccHh
Confidence            9999999996

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=1.2e-55  Score=372.03  Aligned_cols=250  Identities=30%  Similarity=0.476  Sum_probs=227.5

Q ss_pred             cccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHHHHH
Q 024230           13 QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQM-KGLKVTGSVCDVSSRPQRQTLINTV   91 (270)
Q Consensus        13 ~~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i   91 (270)
                      .+.|+|+||++|||||++|||+++|+.|+++|++|++++|+++++++..+++.+ .+.++.++.+|++++++++++++++
T Consensus         2 ~~~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~   81 (260)
T d1h5qa_           2 GFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQI   81 (260)
T ss_dssp             CEEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCcccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHH
Confidence            345799999999999999999999999999999999999999998888777754 4778999999999999999999999


Q ss_pred             HHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEecCccccc-------c
Q 024230           92 SSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRAS-GAASIVLMSSALGIV-------S  163 (270)
Q Consensus        92 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~ii~iss~~~~~-------~  163 (270)
                      .+++ +++|+||||||.....++.+.+.++|++++++|+.+++.+++++.|+|.++ ..+.|++++|.....       +
T Consensus        82 ~~~~-g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~  160 (260)
T d1h5qa_          82 DADL-GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNG  160 (260)
T ss_dssp             HHHS-CSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTE
T ss_pred             HHHh-CCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccccccccccccc
Confidence            9999 899999999999999999999999999999999999999999999998654 556777777765543       3


Q ss_pred             CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHH
Q 024230          164 ANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFL  243 (270)
Q Consensus       164 ~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  243 (270)
                      .++...|++||+|+.+|+|++|.|++++|||||+|+||+++|+|....  .++..+......|++|+.+|+|+|++++||
T Consensus       161 ~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~--~~~~~~~~~~~~pl~R~g~pedvA~~v~fL  238 (260)
T d1h5qa_         161 SLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM--DKKIRDHQASNIPLNRFAQPEEMTGQAILL  238 (260)
T ss_dssp             ECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS--CHHHHHHHHHTCTTSSCBCGGGGHHHHHHH
T ss_pred             CccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhcc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            356789999999999999999999999999999999999999988765  456677788899999999999999999999


Q ss_pred             hCCCCCCccCcEEeecCCcccc
Q 024230          244 CMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       244 ~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                      +|++++|+|||+|.||||+.++
T Consensus       239 ~S~~s~~itG~~i~VDGG~~~~  260 (260)
T d1h5qa_         239 LSDHATYMTGGEYFIDGGQLIW  260 (260)
T ss_dssp             HSGGGTTCCSCEEEECTTGGGC
T ss_pred             hcchhCCCcCceEEECCCeecC
Confidence            9999999999999999999875

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=1e-55  Score=370.60  Aligned_cols=246  Identities=31%  Similarity=0.375  Sum_probs=223.2

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++   +.+..++.+|++++++++++++++.+++ 
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-   78 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRL-   78 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCCeEEEEeecCCHHHHHHHHHHHHHHh-
Confidence            589999999999999999999999999999999999999988887776   4678899999999999999999999999 


Q ss_pred             CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHH
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGA  176 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaa  176 (270)
                      +++|+||||||.....++.+.+.++|++++++|+.+++.++++++|+|+++ +|+||+++|..+..+.++...|++||+|
T Consensus        79 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~G~Iv~isS~~~~~~~~~~~~Y~asKaa  157 (253)
T d1hxha_          79 GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET-GGSIINMASVSSWLPIEQYAGYSASKAA  157 (253)
T ss_dssp             CSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             CCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc-CCceecccchhhhcCccccccccchhHH
Confidence            899999999999988999999999999999999999999999999999765 5999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccC--CceEEEEecCcccCCCCccccCChhhHHHH---hhcCCCCCCCChHhHHHHHHHHhCCCCCCc
Q 024230          177 MNQLAKNLACEWAKD--NIRTNSVAPWYIRTPFTEPLLGNGKFVDEV---KSRTPMGRLGEPKEVSSLVAFLCMPAASYI  251 (270)
Q Consensus       177 l~~~~~sla~el~~~--~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  251 (270)
                      +.+|+|++|.|++++  |||||+|+||+++|+|.....+.....+..   ....|++|+.+|+|+|++++||+|++++|+
T Consensus       158 l~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~i  237 (253)
T d1hxha_         158 VSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVM  237 (253)
T ss_dssp             HHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCccccccCCCCCHHHHHHHHHHHhChhhCCC
Confidence            999999999999984  599999999999999876654433222222   234567889999999999999999999999


Q ss_pred             cCcEEeecCCcccccc
Q 024230          252 TGQTVCIDGGFTVNGF  267 (270)
Q Consensus       252 ~G~~i~vdgG~~~~~~  267 (270)
                      |||+|.||||+.-.++
T Consensus       238 tG~~i~VDGG~~~~g~  253 (253)
T d1hxha_         238 SGSELHADNSILGMGL  253 (253)
T ss_dssp             CSCEEEESSSCTTTTC
T ss_pred             cCcEEEECccHhhCcC
Confidence            9999999999987664

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-55  Score=375.73  Aligned_cols=252  Identities=33%  Similarity=0.492  Sum_probs=231.2

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhc-----CCeEEEEEccCCCHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK-----GLKVTGSVCDVSSRPQRQTLINT   90 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~   90 (270)
                      -.|+||++|||||++|||+++|+.|+++|++|++++|+++++++..+++...     +.++.++.+|++|++++++++++
T Consensus         8 g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~   87 (297)
T d1yxma1           8 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   87 (297)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHH
Confidence            4699999999999999999999999999999999999999999998888753     56899999999999999999999


Q ss_pred             HHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhh
Q 024230           91 VSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVY  170 (270)
Q Consensus        91 i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y  170 (270)
                      +.+.+ +++|+||||||.....++.+.+.++|++++++|+.+++.++++++|+|.+++.+.||++|+ .+..+.++...|
T Consensus        88 ~~~~~-G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss-~~~~~~~~~~~Y  165 (297)
T d1yxma1          88 TLDTF-GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIV-PTKAGFPLAVHS  165 (297)
T ss_dssp             HHHHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECC-CCTTCCTTCHHH
T ss_pred             HHHHh-CCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccc-cccccccccccc
Confidence            99999 8999999999999999999999999999999999999999999999999998899998865 456778889999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC--ChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCC
Q 024230          171 SATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG--NGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAA  248 (270)
Q Consensus       171 ~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  248 (270)
                      ++||+|+.+|+|++|.|++++|||||+|+||+++|++......  .+...+......|++|+++|+|+|++++||+|+++
T Consensus       166 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~plgR~g~pedvA~~v~fL~Sd~s  245 (297)
T d1yxma1         166 GAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAA  245 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHHSGGG
T ss_pred             hhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence            9999999999999999999999999999999999998755432  23455666778899999999999999999999999


Q ss_pred             CCccCcEEeecCCcccccccc
Q 024230          249 SYITGQTVCIDGGFTVNGFFF  269 (270)
Q Consensus       249 ~~~~G~~i~vdgG~~~~~~~~  269 (270)
                      +|+|||+|.||||+++....|
T Consensus       246 ~~iTG~~i~VDGG~sl~~~~~  266 (297)
T d1yxma1         246 SFITGQSVDVDGGRSLYTHSY  266 (297)
T ss_dssp             TTCCSCEEEESTTGGGCBTTC
T ss_pred             cCcCCcEEEeCcChhhhcCCC
Confidence            999999999999999976655

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=2e-55  Score=372.87  Aligned_cols=252  Identities=26%  Similarity=0.403  Sum_probs=222.0

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcC---CeEEEEEccCCCHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG---LKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      +.|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++.+.+   .++.++.+|++++++++++++++.
T Consensus         1 prL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~   80 (272)
T d1xkqa_           1 PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTL   80 (272)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHH
Confidence            46999999999999999999999999999999999999999999999998754   469999999999999999999999


Q ss_pred             HHcCCcccEEEECCCCCCCCCC----CCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecC-ccccccCCCC
Q 024230           93 SLFNGKLNIFVNNVGTSVLKPT----LEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSS-ALGIVSANVG  167 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss-~~~~~~~~~~  167 (270)
                      +++ +++|++|||||.....++    .+.+.++|++++++|+.+++.++++++|+|++++ |.+|+++| .++..+.++.
T Consensus        81 ~~~-g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~Ss~a~~~~~~~~  158 (272)
T d1xkqa_          81 KQF-GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDF  158 (272)
T ss_dssp             HHH-SCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCSS
T ss_pred             HHh-CCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccC-CccccccchhccccCCCCc
Confidence            999 899999999999776555    4578889999999999999999999999998876 45555555 5678899999


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhh-------HHHHhhcCCCCCCCChHhHHHHH
Q 024230          168 TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKF-------VDEVKSRTPMGRLGEPKEVSSLV  240 (270)
Q Consensus       168 ~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~dva~~~  240 (270)
                      ..|++||+|+.+|+|++|.|++++|||||+|+||+++|+|..........       .+......|++|+.+|+|+|+++
T Consensus       159 ~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pediA~~v  238 (272)
T d1xkqa_         159 LYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANII  238 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHH
T ss_pred             chhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCCCCcCHHHHHHHH
Confidence            99999999999999999999999999999999999999998766544322       22334567999999999999999


Q ss_pred             HHHhCCC-CCCccCcEEeecCCccc-ccccc
Q 024230          241 AFLCMPA-ASYITGQTVCIDGGFTV-NGFFF  269 (270)
Q Consensus       241 ~~l~s~~-~~~~~G~~i~vdgG~~~-~~~~~  269 (270)
                      +||+|++ +.|+|||+|.||||+++ .++++
T Consensus       239 ~fL~S~~as~~iTG~~i~vDGG~~l~~g~~~  269 (272)
T d1xkqa_         239 LFLADRNLSFYILGQSIVADGGTSLVMGTQA  269 (272)
T ss_dssp             HHHHCHHHHTTCCSCEEEESTTGGGCBGGGG
T ss_pred             HHHhCcchhCCccCeEEEeCcCHHHhcCCCc
Confidence            9999975 57999999999999987 35543

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=5.8e-55  Score=368.64  Aligned_cols=246  Identities=28%  Similarity=0.454  Sum_probs=211.4

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcC---CeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG---LKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      .|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++...+   .++.++.+|++++++++++++++.+
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4899999999999999999999999999999999999999999999998764   3599999999999999999999999


Q ss_pred             HcCCcccEEEECCCCCCC----CCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcc-ccccCCCCh
Q 024230           94 LFNGKLNIFVNNVGTSVL----KPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSAL-GIVSANVGT  168 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~-~~~~~~~~~  168 (270)
                      ++ +++|+||||||....    .++.+.+.|+|++++++|+.+++.++++++|+|++++ |.+|+++|.. +..+.++..
T Consensus        82 ~~-g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~~~~~~~~~~  159 (264)
T d1spxa_          82 KF-GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFP  159 (264)
T ss_dssp             HH-SCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTSH
T ss_pred             Hh-CCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-CcceeeeeeccccccCCCch
Confidence            99 899999999998543    3456779999999999999999999999999998775 5666666654 578889999


Q ss_pred             hhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC-------hhhHHHHhhcCCCCCCCChHhHHHHHH
Q 024230          169 VYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN-------GKFVDEVKSRTPMGRLGEPKEVSSLVA  241 (270)
Q Consensus       169 ~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~dva~~~~  241 (270)
                      .|++||+|+++|+|+||.|++++|||||+|+||+++|+|.......       ....+.+....|++|+.+|+|+|++++
T Consensus       160 ~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~  239 (264)
T d1spxa_         160 YYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIA  239 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHHH
T ss_pred             hhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            9999999999999999999999999999999999999998765322       223445667889999999999999999


Q ss_pred             HHhCC-CCCCccCcEEeecCCccc
Q 024230          242 FLCMP-AASYITGQTVCIDGGFTV  264 (270)
Q Consensus       242 ~l~s~-~~~~~~G~~i~vdgG~~~  264 (270)
                      ||+|+ .++|+|||+|.||||+++
T Consensus       240 fL~S~~~s~~itG~~i~vDGG~sl  263 (264)
T d1spxa_         240 FLADRKTSSYIIGHQLVVDGGSSL  263 (264)
T ss_dssp             HHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             HHhCCcccCCccCceEEeCCChhh
Confidence            99995 489999999999999986

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.1e-54  Score=368.59  Aligned_cols=252  Identities=26%  Similarity=0.429  Sum_probs=225.3

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcC---CeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG---LKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      .|+||+++||||++|||+++|+.|+++|++|++++|++++++++.+++.+.+   .++.++.+|++++++++++++++.+
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA   80 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence            4899999999999999999999999999999999999999999999998764   3689999999999999999999999


Q ss_pred             HcCCcccEEEECCCCCCCC--CCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhh
Q 024230           94 LFNGKLNIFVNNVGTSVLK--PTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYS  171 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~  171 (270)
                      ++ +++|++|||||.....  ...+.+.|+|++++++|+.+++.++++++|+|++++.+.|+++||.++..+.++...|+
T Consensus        81 ~~-G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~~~Y~  159 (274)
T d1xhla_          81 KF-GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYA  159 (274)
T ss_dssp             HH-SCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHHH
T ss_pred             Hc-CCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCCceeh
Confidence            99 8999999999975443  34567899999999999999999999999999998888999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChh-------hHHHHhhcCCCCCCCChHhHHHHHHHHh
Q 024230          172 ATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGK-------FVDEVKSRTPMGRLGEPKEVSSLVAFLC  244 (270)
Q Consensus       172 ~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~dva~~~~~l~  244 (270)
                      +||+|+++|+|++|.|++++|||||+|+||+++|+|.........       ..+......|++|+.+|+|+|++++||+
T Consensus       160 asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR~g~pediA~~v~fL~  239 (274)
T d1xhla_         160 CAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLA  239 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHH
T ss_pred             hhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCCCcCHHHHHHHHHHHc
Confidence            999999999999999999999999999999999998766543322       2222345679999999999999999999


Q ss_pred             CC-CCCCccCcEEeecCCccc-ccccc
Q 024230          245 MP-AASYITGQTVCIDGGFTV-NGFFF  269 (270)
Q Consensus       245 s~-~~~~~~G~~i~vdgG~~~-~~~~~  269 (270)
                      |+ .++|+|||+|.||||+++ .+++|
T Consensus       240 S~d~s~~itG~~i~vDGG~~l~~g~~~  266 (274)
T d1xhla_         240 DRNLSSYIIGQSIVADGGSTLVMGMQT  266 (274)
T ss_dssp             CHHHHTTCCSCEEEESTTGGGCCGGGG
T ss_pred             CCccccCccCcEEEeCcCHHHhcCCCc
Confidence            95 689999999999999975 45554

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=6.3e-54  Score=364.32  Aligned_cols=247  Identities=30%  Similarity=0.408  Sum_probs=220.1

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      |+|+||++|||||++|||+++|+.|+++|++|++++|++++++++.+++   +.++.++.+|++++++++++++++.+++
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   77 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH---GDNVLGIVGDVRSLEDQKQAASRCVARF   77 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCCeeEEecccccHHHHHHHHHHHHHHh
Confidence            6799999999999999999999999999999999999999888776654   4679999999999999999999999999


Q ss_pred             CCcccEEEECCCCCCCCC-----CCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhh
Q 024230           96 NGKLNIFVNNVGTSVLKP-----TLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVY  170 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y  170 (270)
                       +++|++|||||.....+     ..+.+.++|++++++|+.+++.++++++|+|++++ |.||+++|..+..+.++...|
T Consensus        78 -g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~~~~~~~~Y  155 (276)
T d1bdba_          78 -GKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFYPNGGGPLY  155 (276)
T ss_dssp             -SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSTTSSCHHH
T ss_pred             -CCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhccCCCCCchH
Confidence             89999999999865432     24455678999999999999999999999998775 899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC--------ChhhHHHHhhcCCCCCCCChHhHHHHHHH
Q 024230          171 SATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG--------NGKFVDEVKSRTPMGRLGEPKEVSSLVAF  242 (270)
Q Consensus       171 ~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~dva~~~~~  242 (270)
                      ++||+|+.+|+|++|.|+++. ||||+|+||+++|+|......        .....+.+....|++|+.+|+|++++++|
T Consensus       156 ~asKaal~~ltr~lA~ela~~-IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeva~~v~f  234 (276)
T d1bdba_         156 TAAKHAIVGLVRELAFELAPY-VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVF  234 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTSSCCCGGGGSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcc-eEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            999999999999999999985 999999999999998754321        23445567788999999999999999999


Q ss_pred             HhCC-CCCCccCcEEeecCCccccccc
Q 024230          243 LCMP-AASYITGQTVCIDGGFTVNGFF  268 (270)
Q Consensus       243 l~s~-~~~~~~G~~i~vdgG~~~~~~~  268 (270)
                      |+|+ +++|+|||+|.||||+++.+..
T Consensus       235 L~S~~~a~~itG~~i~VDGG~~~~g~~  261 (276)
T d1bdba_         235 FATRGDAAPATGALLNYDGGLGVRGFF  261 (276)
T ss_dssp             HHCHHHHTTCSSCEEEESSSGGGCCSS
T ss_pred             HcCCcccCCeeCcEEEECcChhhccee
Confidence            9984 6899999999999999987653

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=5.6e-54  Score=361.18  Aligned_cols=248  Identities=26%  Similarity=0.310  Sum_probs=217.5

Q ss_pred             cCCCCCCEEEEecCCC--cHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTK--GLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~--giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      ..+|+||++|||||+|  |||+++|++|+++|++|++++|+++..+...+. ...+.+..++.+|++|+++++++++++.
T Consensus         3 ~~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (256)
T d1ulua_           3 TVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKL-AEALGGALLFRADVTQDEELDALFAGVK   81 (256)
T ss_dssp             EECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH-HHHTTCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHh-hhccCcccccccccCCHHHHHHHHHHHH
Confidence            4689999999999987  999999999999999999999997765554443 4445567789999999999999999999


Q ss_pred             HHcCCcccEEEECCCCCC----CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCCh
Q 024230           93 SLFNGKLNIFVNNVGTSV----LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGT  168 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~  168 (270)
                      +++ +++|+||||||...    ..++.+.+.++|+..+++|+.+++.+++.+.|+|++  .|+||+++|..+..+.++..
T Consensus        82 ~~~-g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~--~G~Iv~isS~~~~~~~~~~~  158 (256)
T d1ulua_          82 EAF-GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEKVVPKYN  158 (256)
T ss_dssp             HHH-SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGTSBCTTCH
T ss_pred             Hhc-CCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc--CCEEEEEeehHhcCCCCCch
Confidence            999 89999999999864    345678899999999999999999999999999865  48999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCC
Q 024230          169 VYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAA  248 (270)
Q Consensus       169 ~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  248 (270)
                      .|++||+|+++|+|++|.|++++|||||+|+||+++|++.......++..+......|++|+.+|+|+|+++.||+|+++
T Consensus       159 ~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s  238 (256)
T d1ulua_         159 VMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPLA  238 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence            99999999999999999999999999999999999999988876677778888889999999999999999999999999


Q ss_pred             CCccCcEEeecCCccccc
Q 024230          249 SYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       249 ~~~~G~~i~vdgG~~~~~  266 (270)
                      +++|||+|.||||+++.|
T Consensus       239 ~~itG~~i~VDGG~~~~G  256 (256)
T d1ulua_         239 SGITGEVVYVDAGYHIMG  256 (256)
T ss_dssp             TTCCSCEEEESTTGGGBC
T ss_pred             CCccCCeEEECcCEeCcC
Confidence            999999999999999875

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=7.7e-54  Score=356.81  Aligned_cols=239  Identities=29%  Similarity=0.407  Sum_probs=213.5

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+   +.+.++.++++|++++++++++++++.+.+ 
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~-   77 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVA---ALEAEAIAVVADVSDPKAVEAVFAEALEEF-   77 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---TCCSSEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---HcCCceEEEEecCCCHHHHHHHHHHHHHHh-
Confidence            5899999999999999999999999999999999999987765544   446789999999999999999999999999 


Q ss_pred             CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHH
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGA  176 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaa  176 (270)
                      +++|++|||||.....++.+.+.++|++++++|+.+++.+++.+.|+|.++  +.++++|| .+..+.|++..|+++|+|
T Consensus        78 g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~--~~i~~~ss-~a~~~~~~~~~Y~~sK~a  154 (241)
T d2a4ka1          78 GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG--GSLVLTGS-VAGLGAFGLAHYAAGKLG  154 (241)
T ss_dssp             SCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT--CEEEEECC-CTTCCHHHHHHHHHCSSH
T ss_pred             CCccEeccccccccccchhhhhccccccccccccccccccccccccccccc--cceeeccc-cccccccCccccchhhHH
Confidence            899999999999989999999999999999999999999999999998654  35555544 455566788999999999


Q ss_pred             HHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEE
Q 024230          177 MNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTV  256 (270)
Q Consensus       177 l~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i  256 (270)
                      +++|+|++|+|++++|||||+|+||+++|+|....  .++..++.....|.+|+.+|+|+++++.||+|++++++||++|
T Consensus       155 l~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~--~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~S~~s~~itG~~i  232 (241)
T d2a4ka1         155 VVGLARTLALELARKGVRVNVLLPGLIQTPMTAGL--PPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQAL  232 (241)
T ss_dssp             HHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS--CHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhh--hHhHHHHHHhCCCCCCCcCHHHHHHHHHHHhcchhCCCcCceE
Confidence            99999999999999999999999999999988654  4566777888899999999999999999999999999999999


Q ss_pred             eecCCccc
Q 024230          257 CIDGGFTV  264 (270)
Q Consensus       257 ~vdgG~~~  264 (270)
                      .+|||+++
T Consensus       233 ~vDGG~s~  240 (241)
T d2a4ka1         233 YVDGGRSI  240 (241)
T ss_dssp             EESTTTTT
T ss_pred             EeCCCccc
Confidence            99999986

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=1.8e-53  Score=357.00  Aligned_cols=237  Identities=25%  Similarity=0.326  Sum_probs=218.1

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcccE
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNI  101 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~  101 (270)
                      ++|||||++|||+++|+.|+++|++|++++|+.+.++++......      +..+|++++++++++++++.++| +++|+
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~------~~~~dv~~~~~~~~~~~~~~~~~-G~iDi   74 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAET------YPQLKPMSEQEPAELIEAVTSAY-GQVDV   74 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHH------CTTSEECCCCSHHHHHHHHHHHH-SCCCE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCc------EEEeccCCHHHHHHHHHHHHHHc-CCCCE
Confidence            799999999999999999999999999999998887776554433      23589999999999999999999 89999


Q ss_pred             EEECCCCC-CCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHHHHH
Q 024230          102 FVNNVGTS-VLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQL  180 (270)
Q Consensus       102 li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal~~~  180 (270)
                      ||||||.. ..+++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||..+..+.++...|++||+|+.+|
T Consensus        75 LVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKaal~~l  154 (252)
T d1zmta1          75 LVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTL  154 (252)
T ss_dssp             EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHH
T ss_pred             EEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccccccccccccHHHH
Confidence            99999975 45789999999999999999999999999999999999899999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEecCcccCCCCccccC------ChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCc
Q 024230          181 AKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG------NGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ  254 (270)
Q Consensus       181 ~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  254 (270)
                      +|++|.|++++|||||+|+||+++|+|...+..      .++..+.+....|++|+++|+|+|+++.||+|++++|+|||
T Consensus       155 t~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~iTG~  234 (252)
T d1zmta1         155 ANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLTGQ  234 (252)
T ss_dssp             HHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTTSCGGGTTC
T ss_pred             HHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCC
Confidence            999999999999999999999999999876542      34566778888999999999999999999999999999999


Q ss_pred             EEeecCCcccc
Q 024230          255 TVCIDGGFTVN  265 (270)
Q Consensus       255 ~i~vdgG~~~~  265 (270)
                      +|.||||+++.
T Consensus       235 ~i~vdGG~~~~  245 (252)
T d1zmta1         235 VFWLAGGFPMI  245 (252)
T ss_dssp             EEEESTTCCCC
T ss_pred             eEEECCCceeC
Confidence            99999999874

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=9.5e-53  Score=348.90  Aligned_cols=231  Identities=30%  Similarity=0.438  Sum_probs=209.5

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      |+||++|||||++|||+++|+.|+++|++|++++|+++.+++       .+  ..++.+|+++.      ++.+.+++ +
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~-------~~--~~~~~~Dv~~~------~~~~~~~~-g   65 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR-------SG--HRYVVCDLRKD------LDLLFEKV-K   65 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-------TC--SEEEECCTTTC------HHHHHHHS-C
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHh-------cC--CcEEEcchHHH------HHHHHHHh-C
Confidence            789999999999999999999999999999999999876543       23  34577999863      34455666 8


Q ss_pred             cccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHH
Q 024230           98 KLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAM  177 (270)
Q Consensus        98 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal  177 (270)
                      ++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||+++|..+..+.+....|++||+|+
T Consensus        66 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~~~Y~asKaal  145 (234)
T d1o5ia_          66 EVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMAL  145 (234)
T ss_dssp             CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             CCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccccccchhHHHHH
Confidence            99999999999888999999999999999999999999999999999999899999999999999999999999999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEEe
Q 024230          178 NQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVC  257 (270)
Q Consensus       178 ~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~  257 (270)
                      .+|+|++|.|++++|||||+|+||+++|+|..... .+...+.+....|++|+.+|+|++++++||+|++++|+|||+|.
T Consensus       146 ~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~-~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~~itG~~i~  224 (234)
T d1o5ia_         146 TGFLKTLSFEVAPYGITVNCVAPGWTETERVKELL-SEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQTIV  224 (234)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHS-CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHHHhcccCeEEeecccCccchhhhhhhc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhcCCcCcEEE
Confidence            99999999999999999999999999999887654 33455677888999999999999999999999999999999999


Q ss_pred             ecCCcccc
Q 024230          258 IDGGFTVN  265 (270)
Q Consensus       258 vdgG~~~~  265 (270)
                      ||||++..
T Consensus       225 vDGG~s~~  232 (234)
T d1o5ia_         225 VDGGLSKF  232 (234)
T ss_dssp             ESTTCCCC
T ss_pred             ECcccccC
Confidence            99999753

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=1.8e-52  Score=352.44  Aligned_cols=244  Identities=25%  Similarity=0.384  Sum_probs=219.8

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEee-CChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCS-RTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~-r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      .|+||+||||||++|||+++|+.|+++|++|++++ |+++..++..++++..+.+++++.+|++|+++++++++++.+++
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF   82 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence            48999999999999999999999999999999864 56666788899999989999999999999999999999999999


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccc-cccCCCChhhhhhH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALG-IVSANVGTVYSATK  174 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~-~~~~~~~~~y~~sK  174 (270)
                       +++|++|||||.....++.+.+.++|++.+++|+.+++.+++.++|+|+++  +.+++++|..+ ..+.+++..|++||
T Consensus        83 -g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--g~~iii~s~~~~~~~~~~~~~Y~asK  159 (259)
T d1ja9a_          83 -GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG--GRIILTSSIAAVMTGIPNHALYAGSK  159 (259)
T ss_dssp             -SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE--EEEEEECCGGGTCCSCCSCHHHHHHH
T ss_pred             -CCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC--CcccccccccccccCCCCchhHHHHH
Confidence             899999999999999999999999999999999999999999999999654  57777766655 44688999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCcccc-----------CChhhHHHHhhcCCCCCCCChHhHHHHHHHH
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLL-----------GNGKFVDEVKSRTPMGRLGEPKEVSSLVAFL  243 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  243 (270)
                      +|+++|+|+||+|++++|||||+|+||+++|+|.+...           ......+.+....|++|+++|+||++++.||
T Consensus       160 ~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eVa~~v~fL  239 (259)
T d1ja9a_         160 AAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSAL  239 (259)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCCCCcCHHHHHHHHHHH
Confidence            99999999999999999999999999999998754321           1134456677889999999999999999999


Q ss_pred             hCCCCCCccCcEEeecCCcc
Q 024230          244 CMPAASYITGQTVCIDGGFT  263 (270)
Q Consensus       244 ~s~~~~~~~G~~i~vdgG~~  263 (270)
                      +|++++++||++|.||||+.
T Consensus       240 ~S~~a~~itG~~i~vDGG~~  259 (259)
T d1ja9a_         240 CQEESEWINGQVIKLTGGGI  259 (259)
T ss_dssp             HSGGGTTCCSCEEEESTTCC
T ss_pred             hCchhcCCcCceEEeCCCCC
Confidence            99999999999999999983

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-52  Score=352.86  Aligned_cols=241  Identities=23%  Similarity=0.320  Sum_probs=217.3

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK--GLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      +.||++|||||++|||+++|+.|+++|++|++++|+++++++..+++.+.  +.++.++.+|++++++++++++++.+++
T Consensus         1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (254)
T d2gdza1           1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   80 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            47999999999999999999999999999999999999999998888764  4679999999999999999999999999


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC---CcEEEEecCccccccCCCChhhhh
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG---AASIVLMSSALGIVSANVGTVYSA  172 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~---~g~ii~iss~~~~~~~~~~~~y~~  172 (270)
                       +++|+||||||....        ++|++++++|+.+++.+++.++|+|.+++   .|+||++||..+..+.++...|++
T Consensus        81 -G~iDilVnnAg~~~~--------~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~a  151 (254)
T d2gdza1          81 -GRLDILVNNAGVNNE--------KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCA  151 (254)
T ss_dssp             -SCCCEEEECCCCCCS--------SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             -CCcCeeccccccccc--------ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccchHH
Confidence             899999999998643        34889999999999999999999998764   478999999999999999999999


Q ss_pred             hHHHHHHHHHH--HHHHHccCCceEEEEecCcccCCCCccccCC------hhhHHHHhhcCCCCCCCChHhHHHHHHHHh
Q 024230          173 TKGAMNQLAKN--LACEWAKDNIRTNSVAPWYIRTPFTEPLLGN------GKFVDEVKSRTPMGRLGEPKEVSSLVAFLC  244 (270)
Q Consensus       173 sKaal~~~~~s--la~el~~~~i~v~~v~pG~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  244 (270)
                      ||+|+.+|+|+  |+.|++++|||||+|+||+++|+|...+...      .+..+.+....|++|+.+|+|+|++++||+
T Consensus       152 sKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~  231 (254)
T d2gdza1         152 SKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLI  231 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHH
Confidence            99999999997  6889999999999999999999988765432      233455666778899999999999999999


Q ss_pred             CCCCCCccCcEEeecCCcccccccc
Q 024230          245 MPAASYITGQTVCIDGGFTVNGFFF  269 (270)
Q Consensus       245 s~~~~~~~G~~i~vdgG~~~~~~~~  269 (270)
                      |++  ++||++|.||||+.+.+-+|
T Consensus       232 s~~--~itG~~i~VdGG~~~~~~~~  254 (254)
T d2gdza1         232 EDD--ALNGAIMKITTSKGIHFQDY  254 (254)
T ss_dssp             HCT--TCSSCEEEEETTTEEEECCC
T ss_pred             cCC--CCCCCEEEECCCCeeecccC
Confidence            874  49999999999999988877

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=1e-51  Score=350.14  Aligned_cols=248  Identities=26%  Similarity=0.399  Sum_probs=221.1

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCC-hhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRT-ETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      ...+|+||++|||||++|||+++|+.|+++|++|++++|+ ++.++++.+++++.+.++.++.+|++++++++++++++.
T Consensus        12 ~~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~   91 (272)
T d1g0oa_          12 QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAV   91 (272)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHH
Confidence            4567999999999999999999999999999999999877 456788888888888999999999999999999999999


Q ss_pred             HHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccc-ccCCCChhhh
Q 024230           93 SLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGI-VSANVGTVYS  171 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~-~~~~~~~~y~  171 (270)
                      +.+ +++|++|||+|.....++.+.+.++|++.+++|+.+++.+++++.|+|.++  |++++++|..+. .+.+....|+
T Consensus        92 ~~~-g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~--g~~i~i~s~~~~~~~~~~~~~Y~  168 (272)
T d1g0oa_          92 KIF-GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG--GRLILMGSITGQAKAVPKHAVYS  168 (272)
T ss_dssp             HHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT--CEEEEECCGGGTCSSCSSCHHHH
T ss_pred             HHh-CCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccc--cccccccccccccccccchhhHH
Confidence            999 899999999999999999999999999999999999999999999999764  688888887654 4567778899


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC---------hhh--HHHHhhcCCCCCCCChHhHHHHH
Q 024230          172 ATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN---------GKF--VDEVKSRTPMGRLGEPKEVSSLV  240 (270)
Q Consensus       172 ~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~---------~~~--~~~~~~~~~~~~~~~~~dva~~~  240 (270)
                      ++|+|+++|+|++|.|++++|||||+|+||+++|+|.......         ...  ........|++|+.+|+|||+++
T Consensus       169 asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~v  248 (272)
T d1g0oa_         169 GSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVV  248 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCCCcCHHHHHHHH
Confidence            9999999999999999999999999999999999976443211         111  11245678999999999999999


Q ss_pred             HHHhCCCCCCccCcEEeecCCccc
Q 024230          241 AFLCMPAASYITGQTVCIDGGFTV  264 (270)
Q Consensus       241 ~~l~s~~~~~~~G~~i~vdgG~~~  264 (270)
                      .||+|+.++++||++|.||||+.|
T Consensus       249 ~fL~s~~s~~itG~~i~vDGG~~m  272 (272)
T d1g0oa_         249 CFLASNDGGWVTGKVIGIDGGACM  272 (272)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHHhCchhcCccCceEeECCCCCC
Confidence            999999999999999999999864

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=2.2e-51  Score=341.56  Aligned_cols=230  Identities=20%  Similarity=0.287  Sum_probs=213.7

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCe-------EEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGAT-------VHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~-------v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      ++||||||++|||+++|++|+++|++       |++++|+++.++++.++++..+.++.++.+|++|+++++++++++.+
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999997       99999999999999999999899999999999999999999999999


Q ss_pred             HcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhh
Q 024230           94 LFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                      ++ +++|+||||||.....++.+.+.++|++++++|+.|++.++++++|+|++++.|+||+++|..+..+.++...|++|
T Consensus        82 ~~-g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~as  160 (240)
T d2bd0a1          82 RY-GHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMS  160 (240)
T ss_dssp             HT-SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             Hc-CCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCChHHHHH
Confidence            99 89999999999999999999999999999999999999999999999999989999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccC
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG  253 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  253 (270)
                      |+|+.+|+|+++.|++++|||||+|+||+++|+|........           ..++.+|+|+|+.++||+++.+++++|
T Consensus       161 K~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~~~-----------~~~~~~PedvA~~v~~l~s~~~~~~~~  229 (240)
T d2bd0a1         161 KFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEM-----------QALMMMPEDIAAPVVQAYLQPSRTVVE  229 (240)
T ss_dssp             HHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCSTT-----------GGGSBCHHHHHHHHHHHHTSCTTEEEE
T ss_pred             HHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCHhh-----------HhcCCCHHHHHHHHHHHHcCCccCccC
Confidence            999999999999999999999999999999999987653221           134678999999999999998888888


Q ss_pred             cE-EeecCCc
Q 024230          254 QT-VCIDGGF  262 (270)
Q Consensus       254 ~~-i~vdgG~  262 (270)
                      ++ +..+||-
T Consensus       230 ~~~i~p~~G~  239 (240)
T d2bd0a1         230 EIILRPTSGD  239 (240)
T ss_dssp             EEEEEETTCC
T ss_pred             CEEEEecCCC
Confidence            74 5577663

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.4e-52  Score=345.25  Aligned_cols=238  Identities=25%  Similarity=0.386  Sum_probs=212.1

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      .|+||++|||||++|||+++|+.|+++|++|++++|++++++++.+     ...+....+|+.+++.++...    ..+ 
T Consensus         3 ~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~-----~~~~~~~~~d~~~~~~~~~~~----~~~-   72 (245)
T d2ag5a1           3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK-----YPGIQTRVLDVTKKKQIDQFA----NEV-   72 (245)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG-----STTEEEEECCTTCHHHHHHHH----HHC-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-----ccCCceeeeeccccccccccc----ccc-
Confidence            4999999999999999999999999999999999999887765432     234777888998876655544    445 


Q ss_pred             CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccc-ccCCCChhhhhhHH
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGI-VSANVGTVYSATKG  175 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~-~~~~~~~~y~~sKa  175 (270)
                      +++|+||||+|....+++.+.+.++|++.+++|+.+++.+++.+.|+|.+++.|+||+++|..+. .+.+....|+++|+
T Consensus        73 ~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~~Y~~sKa  152 (245)
T d2ag5a1          73 ERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKA  152 (245)
T ss_dssp             SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHH
T ss_pred             ccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccchhHHHHHHH
Confidence            79999999999999999999999999999999999999999999999999999999999998775 56788899999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC----ChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCc
Q 024230          176 AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG----NGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI  251 (270)
Q Consensus       176 al~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  251 (270)
                      |+++|+|++|.|++++|||||+|+||+++|++.+....    .....+.+....|++|+.+|+|+++++.||++++++++
T Consensus       153 al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedva~~v~fL~s~~s~~i  232 (245)
T d2ag5a1         153 AVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYV  232 (245)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhCCC
Confidence            99999999999999999999999999999998765432    22345667788999999999999999999999999999


Q ss_pred             cCcEEeecCCccc
Q 024230          252 TGQTVCIDGGFTV  264 (270)
Q Consensus       252 ~G~~i~vdgG~~~  264 (270)
                      ||++|.||||+++
T Consensus       233 TG~~i~VDGG~sl  245 (245)
T d2ag5a1         233 TGNPVIIDGGWSL  245 (245)
T ss_dssp             CSCEEEECTTGGG
T ss_pred             cCceEEeCCCcCC
Confidence            9999999999985

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=3.5e-50  Score=344.43  Aligned_cols=250  Identities=28%  Similarity=0.410  Sum_probs=224.5

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQM-KGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      ..+|+||++|||||++|||+++|++|+++|++|++++|+++++++..+++.. .+.++.++.+|++++++++++++.+.+
T Consensus        20 ~~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~   99 (294)
T d1w6ua_          20 PNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIK   99 (294)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhh
Confidence            3699999999999999999999999999999999999999999888877764 467899999999999999999999999


Q ss_pred             HcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEecCccccccCCCChhhhh
Q 024230           94 LFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRAS-GAASIVLMSSALGIVSANVGTVYSA  172 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~ii~iss~~~~~~~~~~~~y~~  172 (270)
                      .+ +++|++|||||.....++.+.+.+++.+.+.+|..+.+.+.+...+.+... ..+.+++++|..+..+.++...|++
T Consensus       100 ~~-g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~~~Ysa  178 (294)
T d1w6ua_         100 VA-GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSAS  178 (294)
T ss_dssp             HT-CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHH
T ss_pred             hc-cccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccccchHHH
Confidence            98 899999999999988899999999999999999999999998887777654 4567888999888999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC-ChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCc
Q 024230          173 TKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG-NGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYI  251 (270)
Q Consensus       173 sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  251 (270)
                      ||+|+.+|+|++|.|++++|||||+|+||+++|++...... .+...++.....|++|+++|+|+|+++.||+|++++|+
T Consensus       179 sKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~sd~s~~i  258 (294)
T d1w6ua_         179 AKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWI  258 (294)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCchhcCC
Confidence            99999999999999999999999999999999999876544 34567778888999999999999999999999999999


Q ss_pred             cCcEEeecCCcccc
Q 024230          252 TGQTVCIDGGFTVN  265 (270)
Q Consensus       252 ~G~~i~vdgG~~~~  265 (270)
                      ||++|.||||+++.
T Consensus       259 tG~~i~vDGG~~l~  272 (294)
T d1w6ua_         259 NGAVIKFDGGEEVL  272 (294)
T ss_dssp             CSCEEEESTTHHHH
T ss_pred             CCcEEEECCChhhe
Confidence            99999999998743

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-50  Score=338.72  Aligned_cols=242  Identities=23%  Similarity=0.283  Sum_probs=216.9

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcC--CeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG--LKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .|+||++|||||++|||+++|+.|+++|++|++++|++++++++.++++..+  .++.++.||++++++++++++++.++
T Consensus         7 ~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~   86 (257)
T d1xg5a_           7 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ   86 (257)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHh
Confidence            4999999999999999999999999999999999999999999999998764  57999999999999999999999999


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CcEEEEecCccccccC--CCChhh
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG--AASIVLMSSALGIVSA--NVGTVY  170 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~--~g~ii~iss~~~~~~~--~~~~~y  170 (270)
                      + +++|+||||||.....++.+.+.++|++.+++|+.+++++++.++|+|++++  +|+||+++|.++....  +....|
T Consensus        87 ~-g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~~~~Y  165 (257)
T d1xg5a_          87 H-SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFY  165 (257)
T ss_dssp             H-CCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHH
T ss_pred             c-CCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCcccHHH
Confidence            9 8999999999999999999999999999999999999999999999998764  6899999999987654  456679


Q ss_pred             hhhHHHHHHHHHHHHHHH--ccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCC
Q 024230          171 SATKGAMNQLAKNLACEW--AKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAA  248 (270)
Q Consensus       171 ~~sKaal~~~~~sla~el--~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  248 (270)
                      ++||+|+.+|+|+|+.|+  +++|||||+|+||+++|++.....  +...+......|.+++.+|+|+|++++||+|+.+
T Consensus       166 ~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~--~~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~a  243 (257)
T d1xg5a_         166 SATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLH--DKDPEKAAATYEQMKCLKPEDVAEAVIYVLSTPA  243 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHT--TTCHHHHHHHHC---CBCHHHHHHHHHHHHHSCT
T ss_pred             HHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcC--hhhHHHHHhcCCCCCCcCHHHHHHHHHHHhCChh
Confidence            999999999999999998  688999999999999999876653  2344556667789999999999999999999999


Q ss_pred             CCccCcEEeecCC
Q 024230          249 SYITGQTVCIDGG  261 (270)
Q Consensus       249 ~~~~G~~i~vdgG  261 (270)
                      +++|||++..++|
T Consensus       244 ~~itG~i~i~~~g  256 (257)
T d1xg5a_         244 HIQIGDIQMRPTG  256 (257)
T ss_dssp             TEEEEEEEEEETT
T ss_pred             cCeECCEEEEeCC
Confidence            9999997555544

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=9.9e-51  Score=348.12  Aligned_cols=233  Identities=23%  Similarity=0.322  Sum_probs=208.2

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCC---------hhHHHHHHHHHHhcCCeEEEEEccCCCHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRT---------ETELNECIHHLQMKGLKVTGSVCDVSSRPQRQ   85 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~---------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   85 (270)
                      +|+|+||++|||||++|||+++|+.|+++|++|++++|+         .+.+++..+++...+.   ...+|+++.++++
T Consensus         2 Pm~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~d~~~~~~~~   78 (302)
T d1gz6a_           2 PLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG---KAVANYDSVEAGE   78 (302)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC---EEEEECCCGGGHH
T ss_pred             CcCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhccc---ccccccchHHHHH
Confidence            588999999999999999999999999999999998654         4556777777766543   4568999999999


Q ss_pred             HHHHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCC
Q 024230           86 TLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSAN  165 (270)
Q Consensus        86 ~~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~  165 (270)
                      ++++++.+++ +++|+||||||+...+++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.+
T Consensus        79 ~~v~~~~~~~-G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~  157 (302)
T d1gz6a_          79 KLVKTALDTF-GRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNF  157 (302)
T ss_dssp             HHHHHHHHHT-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT
T ss_pred             HHHHHHHHHc-CCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCC
Confidence            9999999999 899999999999999999999999999999999999999999999999999899999999999999999


Q ss_pred             CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhC
Q 024230          166 VGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCM  245 (270)
Q Consensus       166 ~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (270)
                      +...|++||+|+.+|+|+|+.|++++|||||+|+||++.|.+.....   +   .+      .+..+|+|+|++++||+|
T Consensus       158 ~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~~---~---~~------~~~~~PedvA~~v~fL~S  225 (302)
T d1gz6a_         158 GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVMP---E---DL------VEALKPEYVAPLVLWLCH  225 (302)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGSC---H---HH------HHHSCGGGTHHHHHHHTS
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcCc---H---hh------HhcCCHHHHHHHHHHHcC
Confidence            99999999999999999999999999999999999999887654331   1   11      124579999999999999


Q ss_pred             CCCCCccCcEEeecCCccc
Q 024230          246 PAASYITGQTVCIDGGFTV  264 (270)
Q Consensus       246 ~~~~~~~G~~i~vdgG~~~  264 (270)
                      +.+ ++||++|.+||||.-
T Consensus       226 ~~a-~itG~~i~vdGG~~~  243 (302)
T d1gz6a_         226 ESC-EENGGLFEVGAGWIG  243 (302)
T ss_dssp             TTC-CCCSCEEEEETTEEE
T ss_pred             CCc-CCCCcEEEeCCCcee
Confidence            765 789999999999854

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=9.4e-48  Score=323.23  Aligned_cols=248  Identities=18%  Similarity=0.254  Sum_probs=221.9

Q ss_pred             CCCCCEEEEecCCC--cHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           17 SLQGMTALVTGGTK--GLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        17 ~l~gk~vlItG~s~--giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      -|+||++|||||++  |||+++|+.|+++|++|++++|+++..+...+ +.....+......|+++..++.+.++++...
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEE-FAAQLGSDIVLQCDVAEDASIDTMFAELGKV   80 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHH-HHHHTTCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-HHhhcCCcceeecccchHHHHHHHHHHhhhc
Confidence            48999999999999  89999999999999999999999776555544 4444556778899999999999999999998


Q ss_pred             cCCcccEEEECCCCCCCCCC-----CCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChh
Q 024230           95 FNGKLNIFVNNVGTSVLKPT-----LEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTV  169 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~  169 (270)
                      + +++|++|||++......+     .....+.|...+.+|+.+.+.+.+++.|.|.+  ++.||++||..+..+.|.+..
T Consensus        81 ~-~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Ii~iss~~~~~~~~~~~~  157 (258)
T d1qsga_          81 W-PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNV  157 (258)
T ss_dssp             C-SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTTTH
T ss_pred             c-cccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccC--CcEEEEecchhhccCCCCcHH
Confidence            8 899999999998654443     34677889999999999999999999998854  467999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCC
Q 024230          170 YSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAAS  249 (270)
Q Consensus       170 y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  249 (270)
                      |++||+|+++|+|++|+|++++|||||+|+||+++|++...........+....+.|++|+.+|||+++++.||+|++++
T Consensus       158 Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeia~~v~fL~s~~s~  237 (258)
T d1qsga_         158 MGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSA  237 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhc
Confidence            99999999999999999999999999999999999999887766667777888899999999999999999999999999


Q ss_pred             CccCcEEeecCCccccccc
Q 024230          250 YITGQTVCIDGGFTVNGFF  268 (270)
Q Consensus       250 ~~~G~~i~vdgG~~~~~~~  268 (270)
                      ++||++|.||||+++.+|.
T Consensus       238 ~itG~~i~vDGG~~i~g~~  256 (258)
T d1qsga_         238 GISGEVVHVDGGFSIAAMN  256 (258)
T ss_dssp             TCCSCEEEESTTGGGBCSC
T ss_pred             CccCceEEECcCHHHhcCC
Confidence            9999999999999999873

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=2.8e-48  Score=325.41  Aligned_cols=236  Identities=15%  Similarity=0.143  Sum_probs=201.4

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhc-CCeEEEEEccCC-CHHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK-GLKVTGSVCDVS-SRPQRQTLINTVSS   93 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~-~~~~~~~~~~~i~~   93 (270)
                      |+|+||+||||||++|||+++|++|+++|++|++++|+.++.+...+..... +.++.++.+|++ +.++++++++++.+
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence            6899999999999999999999999999999999988877766554443333 458999999998 67789999999999


Q ss_pred             HcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC---CcEEEEecCccccccCCCChhh
Q 024230           94 LFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG---AASIVLMSSALGIVSANVGTVY  170 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~---~g~ii~iss~~~~~~~~~~~~y  170 (270)
                      ++ +++|+||||||..        +.++|++++++|+.|++.++++++|+|.+++   .|+||+++|..+..+.+++..|
T Consensus        81 ~~-g~iDilvnnAG~~--------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y  151 (254)
T d1sbya1          81 QL-KTVDILINGAGIL--------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVY  151 (254)
T ss_dssp             HH-SCCCEEEECCCCC--------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHH
T ss_pred             Hc-CCCCEEEeCCCCC--------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCHHH
Confidence            99 8999999999964        4567999999999999999999999997753   5889999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCC
Q 024230          171 SATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY  250 (270)
Q Consensus       171 ~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  250 (270)
                      ++||+|+.+|+|+|+.|++++|||||+|+||+++|+|.+.+.......+.+.......+..+||++|+.++++.+.   .
T Consensus       152 ~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~~~~~---~  228 (254)
T d1sbya1         152 SASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEA---N  228 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHHHHHHH---C
T ss_pred             HHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhccccCCCCCHHHHHHHHHHhhhC---C
Confidence            9999999999999999999999999999999999998766544333333333333445567899999999888753   3


Q ss_pred             ccCcEEeecCCcc
Q 024230          251 ITGQTVCIDGGFT  263 (270)
Q Consensus       251 ~~G~~i~vdgG~~  263 (270)
                      .||+++.+|||++
T Consensus       229 ~tG~vi~vdgG~l  241 (254)
T d1sbya1         229 KNGAIWKLDLGTL  241 (254)
T ss_dssp             CTTCEEEEETTEE
T ss_pred             CCCCEEEECCCEe
Confidence            5999999999963

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-47  Score=317.09  Aligned_cols=219  Identities=23%  Similarity=0.278  Sum_probs=202.2

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      .+|.||+++||||++|||+++|++|+++|++|++++|++++++++.+++...+.+++++.||++|+++++.+++++.+.+
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   82 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI   82 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            57999999999999999999999999999999999999999999999999989999999999999999999999999998


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHH
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKG  175 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKa  175 (270)
                       +++|++|||||.....++.+.+.++|++++++|+.|+++++++++|+|.+++.|+||++||..+..+.++++.|++||+
T Consensus        83 -g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKa  161 (244)
T d1yb1a_          83 -GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKF  161 (244)
T ss_dssp             -CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHHH
T ss_pred             -CCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCCcHHHHHHHH
Confidence             8999999999999988999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHcc---CCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCC
Q 024230          176 AMNQLAKNLACEWAK---DNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPA  247 (270)
Q Consensus       176 al~~~~~sla~el~~---~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (270)
                      |+.+|+++|+.|+++   +||+|++|+||+++|+|.+...      .      +..+..+|+++++.+.......
T Consensus       162 al~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~~------~------~~~~~~~pe~va~~i~~~~~~~  224 (244)
T d1yb1a_         162 AAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPS------T------SLGPTLEPEEVVNRLMHGILTE  224 (244)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTH------H------HHCCCCCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCcC------c------cccCCCCHHHHHHHHHHHHhcC
Confidence            999999999999987   5899999999999999875421      1      1235668999999998876443

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.2e-47  Score=321.28  Aligned_cols=240  Identities=20%  Similarity=0.198  Sum_probs=213.1

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHH---CCCeEEEeeCChhHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHH
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSM---LGATVHTCSRTETELNECIHHLQMK--GLKVTGSVCDVSSRPQRQTLINTV   91 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~---~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~i   91 (270)
                      .|+||++|||||++|||+++|++|++   +|++|++++|+++.++++.+++...  +.++.++.||++++++++++++.+
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~   82 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            68999999999999999999999997   7999999999999999999998764  468999999999999999999998


Q ss_pred             HHHc---CCcccEEEECCCCCC---CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CcEEEEecCcccccc
Q 024230           92 SSLF---NGKLNIFVNNVGTSV---LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG--AASIVLMSSALGIVS  163 (270)
Q Consensus        92 ~~~~---~~~id~li~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~--~g~ii~iss~~~~~~  163 (270)
                      .+..   .+.+|++|||||...   ..++.+.++++|++++++|+.+++.+++.++|+|++++  .|+||++||..+..+
T Consensus        83 ~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~  162 (259)
T d1oaaa_          83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP  162 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC
T ss_pred             HHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCC
Confidence            7742   257999999999753   45678999999999999999999999999999998765  579999999999999


Q ss_pred             CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCcccc---CChhhHHHHhhcCCCCCCCChHhHHHHH
Q 024230          164 ANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLL---GNGKFVDEVKSRTPMGRLGEPKEVSSLV  240 (270)
Q Consensus       164 ~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~dva~~~  240 (270)
                      .+++..|++||+|+++|+|+|+.|  ++|||||+|+||+++|+|.....   ..+...+.+....+.+++.+|+|+++.+
T Consensus       163 ~~~~~~Y~asKaal~~lt~~la~e--~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~evA~~i  240 (259)
T d1oaaa_         163 YKGWGLYCAGKAARDMLYQVLAAE--EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKL  240 (259)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHH--CTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHHH
T ss_pred             CccchHHHHHHHHHHHHHHHHHhC--CCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            999999999999999999999999  67999999999999999875542   2345555666667889999999999999


Q ss_pred             HHHhCCCCCCccCcEEeec
Q 024230          241 AFLCMPAASYITGQTVCID  259 (270)
Q Consensus       241 ~~l~s~~~~~~~G~~i~vd  259 (270)
                      +||+++ .+|+||++|.|-
T Consensus       241 ~~ll~~-~s~~TG~~idv~  258 (259)
T d1oaaa_         241 LGLLQK-DTFQSGAHVDFY  258 (259)
T ss_dssp             HHHHHH-CCSCTTEEEETT
T ss_pred             HHHhhh-ccCCCCCeEEec
Confidence            999986 579999999863

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.6e-46  Score=311.24  Aligned_cols=234  Identities=27%  Similarity=0.393  Sum_probs=203.9

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++.+++..+++   +.......+|+.+.++++..+.++...+ 
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   77 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL---GNNCVFAPADVTSEKDVQTALALAKGKF-   77 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCCccccccccccccccccccccccccc-
Confidence            699999999999999999999999999999999999999988877766   4578889999999999999999998887 


Q ss_pred             CcccEEEECCCCCCC------CCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc------CCcEEEEecCccccccC
Q 024230           97 GKLNIFVNNVGTSVL------KPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRAS------GAASIVLMSSALGIVSA  164 (270)
Q Consensus        97 ~~id~li~~ag~~~~------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~------~~g~ii~iss~~~~~~~  164 (270)
                      ..+|.++++++....      .++.+.+.++|++++++|+.+++++++++.|+|..+      +.|+||++||..+..+.
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~  157 (248)
T d2o23a1          78 GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ  157 (248)
T ss_dssp             SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC
T ss_pred             ccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCC
Confidence            799999999887543      345678899999999999999999999999998654      56899999999999999


Q ss_pred             CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCC-CCCCChHhHHHHHHHH
Q 024230          165 NVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPM-GRLGEPKEVSSLVAFL  243 (270)
Q Consensus       165 ~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l  243 (270)
                      +++..|++||+|+++|+|+|+.|++++|||||+|+||+++|+|...+.  ++..+.+....|+ +|+++|+|||+++.||
T Consensus       158 ~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~--~~~~~~~~~~~pl~~R~g~peevA~~v~fL  235 (248)
T d2o23a1         158 VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLP--EKVCNFLASQVPFPSRLGDPAEYAHLVQAI  235 (248)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC------------CHHHHTCSSSCSCBCHHHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCC--HHHHHHHHhcCCCCCCCcCHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999987653  3344456666775 8999999999999999


Q ss_pred             hCCCCCCccCcEEee
Q 024230          244 CMPAASYITGQTVCI  258 (270)
Q Consensus       244 ~s~~~~~~~G~~i~v  258 (270)
                      ++  ++|+|||+|.|
T Consensus       236 ~s--~~~itGq~I~v  248 (248)
T d2o23a1         236 IE--NPFLNGEVIRL  248 (248)
T ss_dssp             HH--CTTCCSCEEEE
T ss_pred             Hh--CCCCCceEeEC
Confidence            96  58999999986

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=1e-45  Score=316.70  Aligned_cols=253  Identities=23%  Similarity=0.237  Sum_probs=209.8

Q ss_pred             ccCCCCCCEEEEecCCC--cHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcC------------C--eEEEEEcc
Q 024230           14 NRWSLQGMTALVTGGTK--GLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG------------L--KVTGSVCD   77 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~--giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~------------~--~~~~~~~D   77 (270)
                      ++++|+||++|||||++  |||+++|+.|+++|++|++++|++..............            .  ++..+..+
T Consensus         2 ~~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (297)
T d1d7oa_           2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAV   81 (297)
T ss_dssp             CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTT
T ss_pred             CCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence            57899999999999876  99999999999999999999998765433322221110            0  12222222


Q ss_pred             ------------------CCCHHHHHHHHHHHHHHcCCcccEEEECCCCCC--CCCCCCCCHHHHHHHHHHhhHHHHHHH
Q 024230           78 ------------------VSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSV--LKPTLEYNAEDFSLVMSTNFESAFHLC  137 (270)
Q Consensus        78 ------------------~~~~~~~~~~~~~i~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~  137 (270)
                                        .++..+++++++++.++| +++|+||||||...  ..++.+.+.++|++.+++|+.+++.++
T Consensus        82 ~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~-G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~  160 (297)
T d1d7oa_          82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDF-GSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLL  160 (297)
T ss_dssp             CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHH-SCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             ccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHh-CCCcccccccccccccccchhhhhcccccccccchhhhhhhhh
Confidence                              244556788999999999 89999999999854  567889999999999999999999999


Q ss_pred             HHHHHHHHhcCCcEEEEecCcccc-ccCCCChhhhhhHHHHHHHHHHHHHHHc-cCCceEEEEecCcccCCCCccccCCh
Q 024230          138 QLAHPLLRASGAASIVLMSSALGI-VSANVGTVYSATKGAMNQLAKNLACEWA-KDNIRTNSVAPWYIRTPFTEPLLGNG  215 (270)
Q Consensus       138 ~~~~~~m~~~~~g~ii~iss~~~~-~~~~~~~~y~~sKaal~~~~~sla~el~-~~~i~v~~v~pG~v~t~~~~~~~~~~  215 (270)
                      +++.|+|.++  +.++++++..+. ...+....|+++|+++.++++.++.|++ ++|||||+|+||+++|++.......+
T Consensus       161 ~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~~  238 (297)
T d1d7oa_         161 SHFLPIMNPG--GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFID  238 (297)
T ss_dssp             HHHGGGEEEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHH
T ss_pred             hHHHHHhhcC--CcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchhhhhccCCH
Confidence            9999988664  456666665544 3446677899999999999999999997 67999999999999999988765556


Q ss_pred             hhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCcccccccc
Q 024230          216 KFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNGFFF  269 (270)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~~~  269 (270)
                      +..+......|++|+.+|+||+++++||+|++++|+|||+|.||||+++.|+-+
T Consensus       239 ~~~~~~~~~~PlgR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~s~~G~~~  292 (297)
T d1d7oa_         239 TMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSMGVAL  292 (297)
T ss_dssp             HHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGCSSCT
T ss_pred             HHHHHHHhCCCCCCCCCHHHHHHHHHHHhCchhcCCcCceEEECcCHhhcCCCC
Confidence            677778888999999999999999999999999999999999999999999854

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=5.7e-45  Score=310.08  Aligned_cols=241  Identities=26%  Similarity=0.315  Sum_probs=201.5

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCC-hhHHHHHHHHHHhc-CCeEEEE-----------------EccCCCH
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRT-ETELNECIHHLQMK-GLKVTGS-----------------VCDVSSR   81 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~-~~~~~~~~~~~~~~-~~~~~~~-----------------~~D~~~~   81 (270)
                      -++|||||++|||+++|++|+++|++|++++++ ++..+++.+++... +.....+                 .+|++++
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~   82 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   82 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence            389999999999999999999999999987665 55667777777654 3444444                 4558999


Q ss_pred             HHHHHHHHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHH--------------HHHHHhhHHHHHHHHHHHHHHH--
Q 024230           82 PQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFS--------------LVMSTNFESAFHLCQLAHPLLR--  145 (270)
Q Consensus        82 ~~~~~~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~--------------~~~~~n~~~~~~l~~~~~~~m~--  145 (270)
                      ++++++++++.+++ +++|+||||||.....++.+.+.++|+              ..+.+|+.+++.+.+.+.+.+.  
T Consensus        83 ~~v~~~~~~~~~~~-G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~  161 (284)
T d1e7wa_          83 TRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT  161 (284)
T ss_dssp             HHHHHHHHHHHHHH-SCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHh-CCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence            99999999999999 899999999999888888777666554              4789999999999999988753  


Q ss_pred             ----hcCCcEEEEecCccccccCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHH
Q 024230          146 ----ASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEV  221 (270)
Q Consensus       146 ----~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~  221 (270)
                          +.+.+.||+++|..+..+.+++..|++||+|+++|+|++|.|++++|||||+|+||++.+..  .  ..+...+..
T Consensus       162 ~~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~--~--~~~~~~~~~  237 (284)
T d1e7wa_         162 PAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD--D--MPPAVWEGH  237 (284)
T ss_dssp             CGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG--G--SCHHHHHHH
T ss_pred             HHHhcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhCCccccccccccccccccc--c--CCHHHHHHH
Confidence                33467899999999999999999999999999999999999999999999999999865432  2  134566667


Q ss_pred             hhcCCC-CCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCccccc
Q 024230          222 KSRTPM-GRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       222 ~~~~~~-~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                      ....|. +|+.+|+|+++++.||+|++++|+||++|.||||+++..
T Consensus       238 ~~~~pl~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl~r  283 (284)
T d1e7wa_         238 RSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLTR  283 (284)
T ss_dssp             HTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             HhcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhccC
Confidence            777775 999999999999999999999999999999999998864

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=6.5e-46  Score=322.41  Aligned_cols=247  Identities=17%  Similarity=0.189  Sum_probs=207.2

Q ss_pred             CCCEEEEec--CCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhc------------CCeEEEEE---------
Q 024230           19 QGMTALVTG--GTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK------------GLKVTGSV---------   75 (270)
Q Consensus        19 ~gk~vlItG--~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~------------~~~~~~~~---------   75 (270)
                      .+|++||||  +++|||+++|+.|+++|++|+++++.............+.            ........         
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence            479999999  5689999999999999999999998877654443322211            01122222         


Q ss_pred             -----------ccCCCHHHHHHHHHHHHHHcCCcccEEEECCCCCC--CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHH
Q 024230           76 -----------CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSV--LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHP  142 (270)
Q Consensus        76 -----------~D~~~~~~~~~~~~~i~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  142 (270)
                                 +|+++.++++++++.+.+.| +++|++|||+|...  .+++.+.+.++|++++++|+++++.++|+++|
T Consensus        81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~  159 (329)
T d1uh5a_          81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKY-GKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVN  159 (329)
T ss_dssp             GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHH-CCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred             ccchhhhhhhhhhhhhHHHHHHHHHHHHHHh-CCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHh
Confidence                       36678888999999999999 89999999999764  35788999999999999999999999999999


Q ss_pred             HHHhcCCcEEEEecCccccccCCC-ChhhhhhHHHHHHHHHHHHHHHcc-CCceEEEEecCcccCCCCcccc--------
Q 024230          143 LLRASGAASIVLMSSALGIVSANV-GTVYSATKGAMNQLAKNLACEWAK-DNIRTNSVAPWYIRTPFTEPLL--------  212 (270)
Q Consensus       143 ~m~~~~~g~ii~iss~~~~~~~~~-~~~y~~sKaal~~~~~sla~el~~-~~i~v~~v~pG~v~t~~~~~~~--------  212 (270)
                      +|++  .|+||++||.++..+.|+ ...|++||+|+++|+|++|.||++ +|||||+|+||+++|++.+.+.        
T Consensus       160 ~m~~--~GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~i~g~~~~~~~  237 (329)
T d1uh5a_         160 IMKP--QSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYEN  237 (329)
T ss_dssp             GEEE--EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGGGCC--------
T ss_pred             hccc--ccccccceeehhcccccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhhcccchhhhhhh
Confidence            9955  489999999999988887 457999999999999999999987 5999999999999996544321        


Q ss_pred             -----------------------------------CChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCcEEe
Q 024230          213 -----------------------------------GNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVC  257 (270)
Q Consensus       213 -----------------------------------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~  257 (270)
                                                         ..+...+......|++|..+|+|++++++||+|+.++++|||+|.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~~~pedvA~~v~fLaSd~s~~iTGq~i~  317 (329)
T d1uh5a_         238 NTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITGQTIY  317 (329)
T ss_dssp             ----------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             hhhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCchhCCccCCeEE
Confidence                                               113445556677899999999999999999999999999999999


Q ss_pred             ecCCccccccc
Q 024230          258 IDGGFTVNGFF  268 (270)
Q Consensus       258 vdgG~~~~~~~  268 (270)
                      ||||+++.+++
T Consensus       318 VDGG~~~~g~p  328 (329)
T d1uh5a_         318 VDNGLNIMFLP  328 (329)
T ss_dssp             ESTTGGGCSSC
T ss_pred             ECCCcccccCC
Confidence            99999999875

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=100.00  E-value=4.7e-45  Score=309.26  Aligned_cols=248  Identities=21%  Similarity=0.243  Sum_probs=209.3

Q ss_pred             CCCCCEEEEecCCC--cHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           17 SLQGMTALVTGGTK--GLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        17 ~l~gk~vlItG~s~--giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .|+||++|||||+|  |||.++|+.|+++|++|++++|+++ +++..+++...+....+..+|++++++++++++++.+.
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~-~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKD   80 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHH
Confidence            48999999999875  8999999999999999999999865 44455566666777888999999999999999999999


Q ss_pred             cCCcccEEEECCCCCCCCC----CCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhh
Q 024230           95 FNGKLNIFVNNVGTSVLKP----TLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVY  170 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y  170 (270)
                      + +++|++|||+|......    ..+...+.+...+.++..+.+.+.+.+.+.+  +..+.|+++++.+...+.+....|
T Consensus        81 ~-g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~s~~~~~~~~~~~~~y  157 (274)
T d2pd4a1          81 L-GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLL--NNGASVLTLSYLGSTKYMAHYNVM  157 (274)
T ss_dssp             T-SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE--EEEEEEEEEECGGGTSBCTTCHHH
T ss_pred             c-CCCCeEEeecccccccccccccccccchhhhhhhcccccccccccccccccc--ccCcceeeecccccccccccchhh
Confidence            8 89999999999865433    3345556666666666666666666555432  223457777777777888888999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCC
Q 024230          171 SATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY  250 (270)
Q Consensus       171 ~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  250 (270)
                      ++||+|+.+|+|+++.|++++|||||+|+||++.|++.......+..........|.+|+.+|+|+++++.||+|+.+++
T Consensus       158 ~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedIA~~v~fL~S~~s~~  237 (274)
T d2pd4a1         158 GLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSG  237 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTT
T ss_pred             hHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhhccCCcCHHHHHHHHHHHhChhhCC
Confidence            99999999999999999999999999999999999998887666677777778899999999999999999999999999


Q ss_pred             ccCcEEeecCCccccccc
Q 024230          251 ITGQTVCIDGGFTVNGFF  268 (270)
Q Consensus       251 ~~G~~i~vdgG~~~~~~~  268 (270)
                      +||++|.||||+++.+|.
T Consensus       238 itG~~i~vDGG~~~~g~~  255 (274)
T d2pd4a1         238 VSGEVHFVDAGYHVMGMG  255 (274)
T ss_dssp             CCSCEEEESTTGGGBSSC
T ss_pred             CcCceEEECCChhhccCC
Confidence            999999999999999874

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.8e-45  Score=310.67  Aligned_cols=233  Identities=18%  Similarity=0.241  Sum_probs=190.6

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEE---eeCChhHHHH---HHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHT---CSRTETELNE---CIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l---~~r~~~~~~~---~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      -|+||||||++|||+++|++|+++|++|++   +.|+.+..++   ..+++...+.++.++.+|++|+++++++++++.+
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            478899999999999999999999997544   4565554433   4444444577899999999999999999987642


Q ss_pred             HcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhh
Q 024230           94 LFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSAT  173 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~s  173 (270)
                         +.+|++|||+|.....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.|+...|++|
T Consensus        82 ---g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~~~Y~as  158 (285)
T d1jtva_          82 ---GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCAS  158 (285)
T ss_dssp             ---SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHH
T ss_pred             ---cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCchHHHHH
Confidence               78999999999999999999999999999999999999999999999999989999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhh---------HHHH------hhcCCCCCCCChHhHHH
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKF---------VDEV------KSRTPMGRLGEPKEVSS  238 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~---------~~~~------~~~~~~~~~~~~~dva~  238 (270)
                      |+|+++|+++|+.|++++||+|++|+||+++|+|...+...+..         .+.+      ....+.++..+|||+|+
T Consensus       159 Kaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PeeVA~  238 (285)
T d1jtva_         159 KFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAE  238 (285)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCCCHHHHHH
Confidence            99999999999999999999999999999999998776543211         1111      11223456779999999


Q ss_pred             HHHHHhCCC---CCCccCcE
Q 024230          239 LVAFLCMPA---ASYITGQT  255 (270)
Q Consensus       239 ~~~~l~s~~---~~~~~G~~  255 (270)
                      .++++++..   .+|++|+.
T Consensus       239 ~v~~~~~~~~p~~ry~~g~~  258 (285)
T d1jtva_         239 VFLTALRAPKPTLRYFTTER  258 (285)
T ss_dssp             HHHHHHHCSSCCSEEESCST
T ss_pred             HHHHHHhCCCCCeEEecHHH
Confidence            999999654   35677753

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.5e-43  Score=294.20  Aligned_cols=228  Identities=25%  Similarity=0.299  Sum_probs=196.1

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      .|++|||||++|||+++|++|+++|++|++++|+++.            .+.....+|+++......+..+.....  ..
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~------------~~~~~~~~d~~~~~~~~~~~~~~~~~~--~~   66 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG------------EDLIYVEGDVTREEDVRRAVARAQEEA--PL   66 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS------------SSSEEEECCTTCHHHHHHHHHHHHHHS--CE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc------------ccceEeeccccchhhhHHHHHhhhccc--cc
Confidence            4899999999999999999999999999999998653            356678999999999999998887764  55


Q ss_pred             cEEEECCCCCC----CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHH------HhcCCcEEEEecCccccccCCCChh
Q 024230          100 NIFVNNVGTSV----LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLL------RASGAASIVLMSSALGIVSANVGTV  169 (270)
Q Consensus       100 d~li~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m------~~~~~g~ii~iss~~~~~~~~~~~~  169 (270)
                      +.++++++...    .......+.+.|++++++|+.+++.+++.+.+.+      .+++.|+||++||..+..+.++...
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~  146 (241)
T d1uaya_          67 FAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAA  146 (241)
T ss_dssp             EEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHH
T ss_pred             cchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCchh
Confidence            66666666532    2344567889999999999999999999999984      4556799999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCC-CCCCChHhHHHHHHHHhCCCC
Q 024230          170 YSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPM-GRLGEPKEVSSLVAFLCMPAA  248 (270)
Q Consensus       170 y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~s~~~  248 (270)
                      |++||+|+++|+|++|.|++++|||||+|+||+++|++....  .....++.....|. +|+++|+|+|+++.||+|  +
T Consensus       147 Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~--~~~~~~~~~~~~~~~~R~g~pedvA~~v~fL~s--~  222 (241)
T d1uaya_         147 YAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL--PEKAKASLAAQVPFPPRLGRPEEYAALVLHILE--N  222 (241)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTS--CHHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHH--C
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchh--hhhHHHHHHhcCCCCCCCcCHHHHHHHHHHHHh--C
Confidence            999999999999999999999999999999999999987665  33444445555554 899999999999999998  4


Q ss_pred             CCccCcEEeecCCcccc
Q 024230          249 SYITGQTVCIDGGFTVN  265 (270)
Q Consensus       249 ~~~~G~~i~vdgG~~~~  265 (270)
                      +|+|||+|.||||+++.
T Consensus       223 ~~iTG~~i~VDGG~~m~  239 (241)
T d1uaya_         223 PMLNGEVVRLDGALRMA  239 (241)
T ss_dssp             TTCCSCEEEESTTCCCC
T ss_pred             CCCCCCEEEECCcccCC
Confidence            79999999999999864

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=8.8e-42  Score=287.53  Aligned_cols=241  Identities=23%  Similarity=0.307  Sum_probs=202.3

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhH-HHHHHHHHHhc-CCeEEEEEccCCC----HHHHHHHHHHHHHH
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETE-LNECIHHLQMK-GLKVTGSVCDVSS----RPQRQTLINTVSSL   94 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~-~~~~~~~~~~~-~~~~~~~~~D~~~----~~~~~~~~~~i~~~   94 (270)
                      .++|||||++|||+++|++|+++|++|++++|+.++ .+++.+++... +.+.....+|+.+    ++.++++++.+.++
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   81 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence            379999999999999999999999999999998665 46667777654 5667777766654    56678888888888


Q ss_pred             cCCcccEEEECCCCCCCCCCCC-----------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEecCc
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLE-----------YNAEDFSLVMSTNFESAFHLCQLAHPLLRAS-----GAASIVLMSSA  158 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~-----------~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-----~~g~ii~iss~  158 (270)
                      + +++|++|||||.....++.+           ...+.+...+..|+.+.+...+...+.+...     ..+.++++++.
T Consensus        82 ~-g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (266)
T d1mxha_          82 F-GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDA  160 (266)
T ss_dssp             H-SCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCG
T ss_pred             h-CCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhc
Confidence            8 89999999999876554432           2345677888999999999998887776543     35688899999


Q ss_pred             cccccCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCC-CCChHhHH
Q 024230          159 LGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGR-LGEPKEVS  237 (270)
Q Consensus       159 ~~~~~~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~dva  237 (270)
                      .+..+.+++..|++||+|+++|+|++|.|++++|||||+|+||+++|++...    ....+.+....|++| ..+|||++
T Consensus       161 ~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~----~~~~~~~~~~~pl~r~~~~peeva  236 (266)
T d1mxha_         161 MTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP----QETQEEYRRKVPLGQSEASAAQIA  236 (266)
T ss_dssp             GGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSC----HHHHHHHHTTCTTTSCCBCHHHHH
T ss_pred             cccccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCC----HHHHHHHHhcCCCCCCCCCHHHHH
Confidence            9999999999999999999999999999999999999999999999986532    456677788888865 47999999


Q ss_pred             HHHHHHhCCCCCCccCcEEeecCCccccc
Q 024230          238 SLVAFLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       238 ~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                      ++++||+|++++|+||++|.||||+++.+
T Consensus       237 ~~v~fL~s~~s~~itG~~i~vDGG~~l~~  265 (266)
T d1mxha_         237 DAIAFLVSKDAGYITGTTLKVDGGLILAR  265 (266)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             HHHHHHhCchhCCccCCeEEECccHhhhC
Confidence            99999999999999999999999999864

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=100.00  E-value=1.7e-42  Score=292.36  Aligned_cols=244  Identities=19%  Similarity=0.195  Sum_probs=204.1

Q ss_pred             CCCCCEEEEecC--CCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           17 SLQGMTALVTGG--TKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        17 ~l~gk~vlItG~--s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      -|+||++||||+  ++|||+++|++|+++|++|++++|+++++.+...  +..+.+...+.+|++++++++++++.+.+.
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~--~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~   80 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRIT--DRLPAKAPLLELDVQNEEHLASLAGRVTEA   80 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHH--TTSSSCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHH--HHcCCceeeEeeecccccccccccchhhhc
Confidence            489999999994  5789999999999999999999999876543222  234667788899999999999999999877


Q ss_pred             cC--CcccEEEECCCCCC-----CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCC
Q 024230           95 FN--GKLNIFVNNVGTSV-----LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG  167 (270)
Q Consensus        95 ~~--~~id~li~~ag~~~-----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~  167 (270)
                      +.  +++|+++||+|...     ..++.+.+.+++.+.+.+|+.+.+...+.+.+++.   .+.+++++|.....+.|.+
T Consensus        81 ~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~s~~~~~~~p~~  157 (268)
T d2h7ma1          81 IGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMN---PGGSIVGMDFDPSRAMPAY  157 (268)
T ss_dssp             HCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE---EEEEEEEEECCCSSCCTTT
T ss_pred             cccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcc---cccccccccccccccCccc
Confidence            63  57999999999753     33556788999999999999999999998876543   2456667777778888999


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC----------hhhHHHHhhcCCCCC-CCChHhH
Q 024230          168 TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN----------GKFVDEVKSRTPMGR-LGEPKEV  236 (270)
Q Consensus       168 ~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~----------~~~~~~~~~~~~~~~-~~~~~dv  236 (270)
                      ..|+++|+|+.+|+|++++|++++|||||+|+||+++|++...+...          ....+....+.|+++ +.+|+|+
T Consensus       158 ~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~rr~~~p~dv  237 (268)
T d2h7ma1         158 NWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPV  237 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHH
T ss_pred             chhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCCCCCCHHHH
Confidence            99999999999999999999999999999999999999987554432          112233445677665 8999999


Q ss_pred             HHHHHHHhCCCCCCccCcEEeecCCcccc
Q 024230          237 SSLVAFLCMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       237 a~~~~~l~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                      ++++.||+|+.++++||++|.||||++..
T Consensus       238 a~~v~fL~Sd~a~~iTG~~i~vDGG~~~~  266 (268)
T d2h7ma1         238 AKTVCALLSDWLPATTGDIIYADGGAHTQ  266 (268)
T ss_dssp             HHHHHHHHSSSCTTCCSEEEEESTTGGGC
T ss_pred             HHHHHHHhCchhcCccCCEEEECcCcccc
Confidence            99999999999999999999999999864

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.5e-43  Score=295.88  Aligned_cols=220  Identities=27%  Similarity=0.385  Sum_probs=194.4

Q ss_pred             CCEE-EEecCCCcHHHHHHHHHHHC-CCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           20 GMTA-LVTGGTKGLGLAVVEELSML-GATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        20 gk~v-lItG~s~giG~~la~~l~~~-G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      ||+| |||||++|||+++|++|+++ |++|++++|+++++++..++++..+.++.++.||++|.++++++++++.+++ +
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~-g   80 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY-G   80 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhc-C
Confidence            4554 89999999999999999986 8999999999999999999999988899999999999999999999999998 8


Q ss_pred             cccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCC------------
Q 024230           98 KLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSAN------------  165 (270)
Q Consensus        98 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~------------  165 (270)
                      ++|+||||||+....+..+.+.++|++++++|+++++.+++.++|+|++  .|+||+++|..+..+.+            
T Consensus        81 ~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~--~g~ivnisS~~~~~~~~~~~~y~~~k~~~  158 (275)
T d1wmaa1          81 GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIMSVRALKSCSPELQQKFRS  158 (275)
T ss_dssp             SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHHHHTSCHHHHHHHHC
T ss_pred             CcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCcccccccceeccccccchhhhhhhcc
Confidence            9999999999988888888899999999999999999999999999965  47999999987643321            


Q ss_pred             -----------------------------CChhhhhhHHHHHHHHHHHHHHHcc----CCceEEEEecCcccCCCCcccc
Q 024230          166 -----------------------------VGTVYSATKGAMNQLAKNLACEWAK----DNIRTNSVAPWYIRTPFTEPLL  212 (270)
Q Consensus       166 -----------------------------~~~~y~~sKaal~~~~~sla~el~~----~~i~v~~v~pG~v~t~~~~~~~  212 (270)
                                                   ....|++||+++.+|++.+++||++    .||+|++|+||+++|+|.... 
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~~-  237 (275)
T d1wmaa1         159 ETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPK-  237 (275)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTT-
T ss_pred             cccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccCc-
Confidence                                         1246999999999999999999976    489999999999999987543 


Q ss_pred             CChhhHHHHhhcCCCCCCCChHhHHHHHHHHh--CCCCCCccCcEEeecC
Q 024230          213 GNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLC--MPAASYITGQTVCIDG  260 (270)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~--s~~~~~~~G~~i~vdg  260 (270)
                                      ...+|+|+|+.++|++  +++....+|+.+. |.
T Consensus       238 ----------------~~~~pee~A~~~~~~a~~~~~~~~~~G~~~~-~~  270 (275)
T d1wmaa1         238 ----------------ATKSPEEGAETPVYLALLPPDAEGPHGQFVS-EK  270 (275)
T ss_dssp             ----------------CSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE-TT
T ss_pred             ----------------ccCCHHHHHHHHHHHHcCChhhcCCCeEEEE-CC
Confidence                            1337999999999997  4566788998886 54

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=1e-41  Score=284.66  Aligned_cols=225  Identities=21%  Similarity=0.243  Sum_probs=186.0

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHH---HCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH--
Q 024230           19 QGMTALVTGGTKGLGLAVVEELS---MLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS--   93 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~---~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~--   93 (270)
                      +-|+||||||++|||+++|++|+   ++|++|++++|++++++++.+ +...+.++.++.+|++|++++++++++++.  
T Consensus         1 ~MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   79 (248)
T d1snya_           1 HMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED-LAKNHSNIHILEIDLRNFDAYDKLVADIEGVT   79 (248)
T ss_dssp             CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHH-HHHHCTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-HHhcCCcEEEEEEEeccHHHHHHHHhhhHHHh
Confidence            35899999999999999999996   579999999999998877654 444467899999999999999999999865  


Q ss_pred             HcCCcccEEEECCCCCCC-CCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----------CCcEEEEecCcccc
Q 024230           94 LFNGKLNIFVNNVGTSVL-KPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRAS-----------GAASIVLMSSALGI  161 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-----------~~g~ii~iss~~~~  161 (270)
                      .+ +++|+||||||+... .++.+.+.++|++++++|+.+++.++++++|+|+++           +.|++|+++|..+.
T Consensus        80 ~~-~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~  158 (248)
T d1snya_          80 KD-QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGS  158 (248)
T ss_dssp             GG-GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGC
T ss_pred             hc-CCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccc
Confidence            44 789999999998654 467789999999999999999999999999999864           36899999999876


Q ss_pred             cc---CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHH
Q 024230          162 VS---ANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSS  238 (270)
Q Consensus       162 ~~---~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  238 (270)
                      ..   .++...|++||+|+++|+++++.|++++||+|++|+||+++|+|.....+.                 ++++.++
T Consensus       159 ~~~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~~~~~-----------------~~~~~~~  221 (248)
T d1snya_         159 IQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSAPL-----------------DVPTSTG  221 (248)
T ss_dssp             STTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTTCSB-----------------CHHHHHH
T ss_pred             cCCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCcccccCCC-----------------CchHHHH
Confidence            43   456779999999999999999999999999999999999999988654211                 2223333


Q ss_pred             HHHHHhCCCCCCccCcEEeecCCc
Q 024230          239 LVAFLCMPAASYITGQTVCIDGGF  262 (270)
Q Consensus       239 ~~~~l~s~~~~~~~G~~i~vdgG~  262 (270)
                      .++.++.......+|+.+.+||+.
T Consensus       222 ~i~~~i~~l~~~~tG~~i~~dG~~  245 (248)
T d1snya_         222 QIVQTISKLGEKQNGGFVNYDGTP  245 (248)
T ss_dssp             HHHHHHHHCCGGGTTCEECTTSCB
T ss_pred             HHHHHHHhcCccCCCcEEEECCeE
Confidence            333333333345699999999865

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3e-42  Score=285.82  Aligned_cols=218  Identities=16%  Similarity=0.115  Sum_probs=189.7

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC-C
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN-G   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~-~   97 (270)
                      +||+||||||++|||+++|+.|+++|++|+++++++++.          ........+|..+.++.+.+.+++.+.+. +
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE----------ASASVIVKMTDSFTEQADQVTAEVGKLLGDQ   70 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT----------SSEEEECCCCSCHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc----------ccccceeecccCcHHHHHHHHHHHHHHhCCC
Confidence            699999999999999999999999999999999876542          23556678888889999999988887764 4


Q ss_pred             cccEEEECCCCCCC-CCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHH
Q 024230           98 KLNIFVNNVGTSVL-KPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGA  176 (270)
Q Consensus        98 ~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaa  176 (270)
                      ++|+||||||.... .++.+.+.++|++++++|+.+++.+++.++|+|++  .|+||++||.++..+.++...|++||+|
T Consensus        71 ~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~asKaa  148 (236)
T d1dhra_          71 KVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALDGTPGMIGYGMAKGA  148 (236)
T ss_dssp             CEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHH
T ss_pred             CceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc--ccceeEEccHHHcCCccCCcccHHHHHH
Confidence            79999999997544 45567788999999999999999999999999965  4899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHc--cCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccCc
Q 024230          177 MNQLAKNLACEWA--KDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITGQ  254 (270)
Q Consensus       177 l~~~~~sla~el~--~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  254 (270)
                      +++|+|+|+.|++  ++||||++|+||+++|+|.+......          ...++.+|+++++.+.||+++...+++|+
T Consensus       149 l~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~~~----------~~~~~~~pe~va~~~~~l~s~~~~~i~G~  218 (236)
T d1dhra_         149 VHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPEA----------DFSSWTPLEFLVETFHDWITGNKRPNSGS  218 (236)
T ss_dssp             HHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTTS----------CGGGSEEHHHHHHHHHHHHTTTTCCCTTC
T ss_pred             HHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhCccc----------hhhcCCCHHHHHHHHHHHhCCCccCCCCC
Confidence            9999999999998  57999999999999999865543322          23456689999999999999999999998


Q ss_pred             EEee
Q 024230          255 TVCI  258 (270)
Q Consensus       255 ~i~v  258 (270)
                      .+.|
T Consensus       219 ~i~v  222 (236)
T d1dhra_         219 LIQV  222 (236)
T ss_dssp             EEEE
T ss_pred             eEEE
Confidence            7766

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.6e-41  Score=282.93  Aligned_cols=216  Identities=22%  Similarity=0.227  Sum_probs=192.6

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQM-KGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      |+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++.. .+..+..+.+|+++.+++...++++...+ 
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-   90 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM-   90 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHh-
Confidence            9999999999999999999999999999999999999999998887765 46789999999999999999999999988 


Q ss_pred             CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHH
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGA  176 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaa  176 (270)
                      +.+|+++||||.....++.+.+.++|++++++|+.+++.+++.++|+|+++ +|+||+++|.++..+.|+...|++||+|
T Consensus        91 g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~-~G~ii~isS~~~~~~~p~~~~Y~asKaa  169 (269)
T d1xu9a_          91 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSASKFA  169 (269)
T ss_dssp             TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCCTTCHHHHHHHHH
T ss_pred             CCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc-CCcceEeccchhcCCCCCchHHHHHHHH
Confidence            899999999999988899999999999999999999999999999999755 5999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHcc--CCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhC
Q 024230          177 MNQLAKNLACEWAK--DNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCM  245 (270)
Q Consensus       177 l~~~~~sla~el~~--~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (270)
                      +++|+++|+.|+++  .||+|++|+||+++|+|.........          .....+++++++.++....
T Consensus       170 l~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~~~~~~----------~~~~~~~e~~a~~i~~~~~  230 (269)
T d1xu9a_         170 LDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIV----------HMQAAPKEECALEIIKGGA  230 (269)
T ss_dssp             HHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCGGG----------GGGCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHhccCCc----------cccCCCHHHHHHHHHHHhh
Confidence            99999999999975  46999999999999987644322111          1124468899888876553

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=5.9e-40  Score=274.27  Aligned_cols=223  Identities=20%  Similarity=0.266  Sum_probs=181.9

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCC--eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      |+.|+||||||++|||+++|++|+++|+  +|++++|+.++++++.+   ..+.++.++.+|++++++++++++++.+.+
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~---~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   77 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS---IKDSRVHVLPLTVTCDKSLDTFVSKVGEIV   77 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT---CCCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHH---hhCCceEEEEEecCCHHHHHHHHHHHHHHh
Confidence            4569999999999999999999999996  68889999988766432   235689999999999999999999999887


Q ss_pred             C-CcccEEEECCCCCC-CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----------CcEEEEecCccccc
Q 024230           96 N-GKLNIFVNNVGTSV-LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-----------AASIVLMSSALGIV  162 (270)
Q Consensus        96 ~-~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-----------~g~ii~iss~~~~~  162 (270)
                      + .++|+||||||... ..++.+.+.++|++++++|+.|++.+++.++|+|++++           .+.++++++..+..
T Consensus        78 ~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~  157 (250)
T d1yo6a1          78 GSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSI  157 (250)
T ss_dssp             GGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCS
T ss_pred             CCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccc
Confidence            3 25999999999854 57788999999999999999999999999999997652           37899988876654


Q ss_pred             cCC-------CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHh
Q 024230          163 SAN-------VGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKE  235 (270)
Q Consensus       163 ~~~-------~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  235 (270)
                      ..+       ...+|++||+|+.+|+++|+.|+++.||+|++|+||+++|+|....                 ...+|++
T Consensus       158 ~~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~~-----------------~~~~~e~  220 (250)
T d1yo6a1         158 TDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKN-----------------AALTVEQ  220 (250)
T ss_dssp             TTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC------------------------------HH
T ss_pred             cCCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCCC-----------------CCCCHHH
Confidence            432       3456999999999999999999999999999999999999986432                 1246889


Q ss_pred             HHHHHHHHhCCCCCCccCcEEeecC
Q 024230          236 VSSLVAFLCMPAASYITGQTVCIDG  260 (270)
Q Consensus       236 va~~~~~l~s~~~~~~~G~~i~vdg  260 (270)
                      .+..++..+.......+|..+..||
T Consensus       221 ~a~~~~~~~~~~~~~~sG~f~~~~g  245 (250)
T d1yo6a1         221 STAELISSFNKLDNSHNGRFFMRNL  245 (250)
T ss_dssp             HHHHHHHHHTTCCGGGTTCEEETTE
T ss_pred             HHHHHHHHHhcCCCCCCeEEECCCC
Confidence            9999888888766778999888774

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=6e-40  Score=274.98  Aligned_cols=220  Identities=26%  Similarity=0.421  Sum_probs=169.8

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      |+||||||++|||+++|++|+++|++|++++|++++                 ..+|+.+++..+....++.....+.+|
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~-----------------~~~d~~~~~~~~~~~~~~~~~~~~~id   64 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-----------------VIADLSTAEGRKQAIADVLAKCSKGMD   64 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS-----------------EECCTTSHHHHHHHHHHHHTTCTTCCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH-----------------HHHHhcCHHHHHHHHHHHHHHhCCCCc
Confidence            799999999999999999999999999999997543                 357999999988887777666546899


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccc-------------------
Q 024230          101 IFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGI-------------------  161 (270)
Q Consensus       101 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~-------------------  161 (270)
                      +++||||....       .+.+.....+|..+...+.+.+.+.+.+...+...++.+....                   
T Consensus        65 ~lv~~Ag~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  137 (257)
T d1fjha_          65 GLVLCAGLGPQ-------TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEA  137 (257)
T ss_dssp             EEEECCCCCTT-------CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHH
T ss_pred             EEEEcCCCCCc-------HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEE
Confidence            99999997542       2336777899999999999999999988766666666554322                   


Q ss_pred             --------cc-CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhh-cCCCCCCC
Q 024230          162 --------VS-ANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKS-RTPMGRLG  231 (270)
Q Consensus       162 --------~~-~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~  231 (270)
                              .+ .++...|++||+|+++|+|++|.||+++|||||+|+||+++|++.+....++...+.... ..|++|+.
T Consensus       138 ~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~PlgR~g  217 (257)
T d1fjha_         138 KARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRA  217 (257)
T ss_dssp             HHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCSTTSCC
T ss_pred             EEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhcCCCCCCCc
Confidence                    11 122356999999999999999999999999999999999999998877666555554433 46999999


Q ss_pred             ChHhHHHHHHHHhCCCCCCccCcEEeecCCccc
Q 024230          232 EPKEVSSLVAFLCMPAASYITGQTVCIDGGFTV  264 (270)
Q Consensus       232 ~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~  264 (270)
                      +|+|+++++.||+|++++|+||++|.||||++.
T Consensus       218 ~p~eva~~v~fL~S~~s~~itG~~i~vDGG~ta  250 (257)
T d1fjha_         218 EPSEMASVIAFLMSPAASYVHGAQIVIDGGIDA  250 (257)
T ss_dssp             CTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred             CHHHHHHHHHHHhCchhCCccCceEEeCCCccc
Confidence            999999999999999999999999999999973

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=2.5e-39  Score=268.01  Aligned_cols=217  Identities=17%  Similarity=0.142  Sum_probs=183.3

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC-Cc
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN-GK   98 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~-~~   98 (270)
                      +++||||||++|||+++|++|+++|++|++++|++++.          ........+|..+.++.....+.+...+. ++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   71 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ----------ADSNILVDGNKNWTEQEQSILEQTASSLQGSQ   71 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT----------SSEEEECCTTSCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc----------ccccceeccccCchhHHHHHHHHHHHHhcCCC
Confidence            45679999999999999999999999999999987642          13455677888888888888877777543 78


Q ss_pred             ccEEEECCCCCCC-CCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHH
Q 024230           99 LNIFVNNVGTSVL-KPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAM  177 (270)
Q Consensus        99 id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal  177 (270)
                      +|+||||||.... .++.+.+.++|+.++++|+.+++.+++.++|+|++  +|+||++||..+..+.+++..|++||+|+
T Consensus        72 iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~Y~asKaal  149 (235)
T d1ooea_          72 VDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAMGPTPSMIGYGMAKAAV  149 (235)
T ss_dssp             EEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHH
T ss_pred             eeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhccccccc--ceEEEEeccHHhcCCcccccchHHHHHHH
Confidence            9999999998654 45566677889999999999999999999999965  48999999999999999999999999999


Q ss_pred             HHHHHHHHHHHc--cCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHH-HhCCCCCCccCc
Q 024230          178 NQLAKNLACEWA--KDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAF-LCMPAASYITGQ  254 (270)
Q Consensus       178 ~~~~~sla~el~--~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~-l~s~~~~~~~G~  254 (270)
                      ++|+++++.|++  +.+|+|++|+||+++|+|.+.....          ....+..+|+++++.+++ +.++..++++|+
T Consensus       150 ~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~~~----------~~~~~~~~~~~va~~~~~~l~~~~~~~~tG~  219 (235)
T d1ooea_         150 HHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPN----------ADHSSWTPLSFISEHLLKWTTETSSRPSSGA  219 (235)
T ss_dssp             HHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTT----------CCGGGCBCHHHHHHHHHHHHHCGGGCCCTTC
T ss_pred             HHHHHHHHHHhccCCCceEEEEEecCcCcCcchhhhCcC----------CccccCCCHHHHHHHHHHHhcCccccCCCce
Confidence            999999999998  5789999999999999876554332          123456689999999874 555677889999


Q ss_pred             EEee
Q 024230          255 TVCI  258 (270)
Q Consensus       255 ~i~v  258 (270)
                      .+.|
T Consensus       220 ~i~v  223 (235)
T d1ooea_         220 LLKI  223 (235)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            9998

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=100.00  E-value=3.3e-32  Score=227.98  Aligned_cols=225  Identities=20%  Similarity=0.187  Sum_probs=178.2

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCCh---hHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTE---TELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTV   91 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i   91 (270)
                      ++ .+++||||||++|||+++|++|+++|+ +|++++|+.   +..++..++++..+.++.++.||++|+++++++++++
T Consensus         6 ~~-p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i   84 (259)
T d2fr1a1           6 WK-PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI   84 (259)
T ss_dssp             CC-CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             cC-CcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccc
Confidence            44 346999999999999999999999999 589999975   3456777788888899999999999999999999988


Q ss_pred             HHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhh
Q 024230           92 SSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYS  171 (270)
Q Consensus        92 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~  171 (270)
                      .+.  +++|.++||+|.....++.+.++++|+.++++|+.+++++.+.+    ...+.++||++||..+..+.+++..|+
T Consensus        85 ~~~--~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~----~~~~~~~iv~~SS~a~~~g~~~~~~Ya  158 (259)
T d2fr1a1          85 GDD--VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELT----RELDLTAFVLFSSFASAFGAPGLGGYA  158 (259)
T ss_dssp             CTT--SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHH----TTSCCSEEEEEEEHHHHTCCTTCTTTH
T ss_pred             ccc--ccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHh----hccCCceEeeecchhhccCCcccHHHH
Confidence            654  58999999999999999999999999999999999999987765    556678999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEecCcccCC-CCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCC
Q 024230          172 ATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTP-FTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASY  250 (270)
Q Consensus       172 ~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  250 (270)
                      ++|++++.|++.++    ..|+++++|+||++.++ |...     ...+.+..  .--...+|+++++.+..++....  
T Consensus       159 Aaka~l~~la~~~~----~~Gi~v~~I~pg~~~~~g~~~~-----~~~~~~~~--~G~~~~~~~~~~~~l~~~l~~~~--  225 (259)
T d2fr1a1         159 PGNAYLDGLAQQRR----SDGLPATAVAWGTWAGSGMAEG-----PVADRFRR--HGVIEMPPETACRALQNALDRAE--  225 (259)
T ss_dssp             HHHHHHHHHHHHHH----HTTCCCEEEEECCBC-----------------CTT--TTEECBCHHHHHHHHHHHHHTTC--
T ss_pred             HHHHhHHHHHHHHH----hCCCCEEECCCCcccCCccccc-----hHHHHHHh--cCCCCCCHHHHHHHHHHHHhCCC--
Confidence            99999998876654    46999999999988654 2211     11111111  00124579999999988886432  


Q ss_pred             ccCcEEeecC
Q 024230          251 ITGQTVCIDG  260 (270)
Q Consensus       251 ~~G~~i~vdg  260 (270)
                      ....++.+|.
T Consensus       226 ~~~~v~~~d~  235 (259)
T d2fr1a1         226 VCPIVIDVRW  235 (259)
T ss_dssp             SSCEECEECH
T ss_pred             ceEEEEeCcH
Confidence            3344555553

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.85  E-value=2.1e-20  Score=162.54  Aligned_cols=228  Identities=14%  Similarity=0.064  Sum_probs=155.5

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChh-----HHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTET-----ELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~-----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .|+||||||+|.||.+++++|+++|++|+.++|...     ..+.+..+......++.++.+|++|.++++++++.+   
T Consensus         1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (357)
T d1db3a_           1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (357)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc---
Confidence            389999999999999999999999999999999643     222223322333467999999999999999988753   


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccccc-----------
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVS-----------  163 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~-----------  163 (270)
                         .+|+++|+|+......    +.++.+..+++|+.++.++++++...- ..+..++|++||...+..           
T Consensus        78 ---~~d~v~h~aa~~~~~~----~~~~~~~~~~~Nv~gt~nllea~~~~~-~~~~~r~i~~SS~~vYG~~~~~~~~E~~~  149 (357)
T d1db3a_          78 ---QPDEVYNLGAMSHVAV----SFESPEYTADVDAMGTLRLLEAIRFLG-LEKKTRFYQASTSELYGLVQEIPQKETTP  149 (357)
T ss_dssp             ---CCSEEEECCCCCTTTT----TTSCHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGGTTCCSSSBCTTSC
T ss_pred             ---CCCEEEEeecccccch----hhhCHHHHHHHHHHHHHHHHHHHHHhC-CCCCcEEEEEEchhhhCCCCCCCcCCCCC
Confidence               6899999999865432    223445678999999999998884321 122347999998764421           


Q ss_pred             CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHH---hhc-C---------CCCCC
Q 024230          164 ANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEV---KSR-T---------PMGRL  230 (270)
Q Consensus       164 ~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~---~~~-~---------~~~~~  230 (270)
                      ......|+.||.+.+.+++.+++.+   ++.+..+.|+.+..|..............+   ... .         .....
T Consensus       150 ~~P~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~  226 (357)
T d1db3a_         150 FYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDW  226 (357)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECC
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHh---CCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecc
Confidence            1124579999999999999988764   689999999988887543221111111111   111 1         11125


Q ss_pred             CChHhHHHHHHHHhCCCCCCccCcEEeecCCcccc
Q 024230          231 GEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       231 ~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                      ...+|+++++..++..    -.|+.+++.+|...+
T Consensus       227 ~~v~D~~~a~~~~~~~----~~~~~yni~sg~~~s  257 (357)
T d1db3a_         227 GHAKDYVKMQWMMLQQ----EQPEDFVIATGVQYS  257 (357)
T ss_dssp             EEHHHHHHHHHHTTSS----SSCCCEEECCCCCEE
T ss_pred             eeechHHHHHHHHHhC----CCCCeEEECCCCcee
Confidence            5699999999877743    257888888776653

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.83  E-value=2e-22  Score=160.43  Aligned_cols=154  Identities=12%  Similarity=0.063  Sum_probs=116.1

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      ..+|+||+|+||||++|||+++|+.|+++|++|++++|+.+++++..+++.... ++....+|+++.+++++++      
T Consensus        18 ~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~------   90 (191)
T d1luaa1          18 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF-KVNVTAAETADDASRAEAV------   90 (191)
T ss_dssp             TSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH-TCCCEEEECCSHHHHHHHT------
T ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhcc-chhhhhhhcccHHHHHHHh------
Confidence            579999999999999999999999999999999999999999988888887642 3456789999998887765      


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC-CCChhhhhh
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA-NVGTVYSAT  173 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~-~~~~~y~~s  173 (270)
                        +++|+||||||..    +...+.++|++.+++|+.+.++....+.+.+.... .....+++.....+. .+...|+.+
T Consensus        91 --~~iDilin~Ag~g----~~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~g~~~y~~s  163 (191)
T d1luaa1          91 --KGAHFVFTAGAIG----LELLPQAAWQNESSIEIVADYNAQPPLGIGGIDAT-DKGKEYGGKRAFGALGIGGLKLKLH  163 (191)
T ss_dssp             --TTCSEEEECCCTT----CCCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCTT-CEEEEETTEEEECHHHHHHHHHHHH
T ss_pred             --cCcCeeeecCccc----cccCCHHHHHhhhcceeehhHhhHHHHHHHhhhhc-cCcEEecceEEEeccCcCcHHHHHH
Confidence              7899999999963    34578999999999998887776544433222221 222222222222111 234569999


Q ss_pred             HHHHHHHHH
Q 024230          174 KGAMNQLAK  182 (270)
Q Consensus       174 Kaal~~~~~  182 (270)
                      |+++..+++
T Consensus       164 k~a~~~l~~  172 (191)
T d1luaa1         164 RACIAKLFE  172 (191)
T ss_dssp             HHHHHHHTS
T ss_pred             HHHHHHHHh
Confidence            999988774

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.80  E-value=9.1e-19  Score=150.82  Aligned_cols=229  Identities=13%  Similarity=0.101  Sum_probs=158.2

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHH-hcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQ-MKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      ++||||||+|.||+.+++.|+++|++|++++|............+ ....++.++++|++|.+.+.++++.      .++
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~------~~~   74 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHD------HAI   74 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHH------TTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhc------cCC
Confidence            369999999999999999999999999999763322111111111 1235788899999999998888865      479


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCC------------CC
Q 024230          100 NIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSAN------------VG  167 (270)
Q Consensus       100 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~------------~~  167 (270)
                      |++||+|+.....    .+.++..+.+++|+.++.++++++    ++.+..++|++||...+.+.+            ..
T Consensus        75 d~ViHlAa~~~~~----~~~~~~~~~~~~Nv~gt~nlL~~~----~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~  146 (338)
T d1udca_          75 DTVIHFAGLKAVG----ESVQKPLEYYDNNVNGTLRLISAM----RAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQ  146 (338)
T ss_dssp             SEEEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCS
T ss_pred             CEEEECCCccchh----hHHhCHHHHHHhHHHHHHHHHHHH----HHhCCCEEEecCcceEEccccccccccccccCCCc
Confidence            9999999964321    233445688999999999999888    444556899999887653321            24


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC------ChhhHHHHhh-----cCC----------
Q 024230          168 TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG------NGKFVDEVKS-----RTP----------  226 (270)
Q Consensus       168 ~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~------~~~~~~~~~~-----~~~----------  226 (270)
                      ..|+.+|.+.+.+.+....+.  .++.+..+.|+.+..+..+....      .......+..     ..+          
T Consensus       147 ~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~  224 (338)
T d1udca_         147 SPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPT  224 (338)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSS
T ss_pred             chHHHHHhhhhHHHHHHHhhc--cCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCccc
Confidence            579999999999998877663  47888888888887764432211      1112221111     111          


Q ss_pred             -----CCCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCcccc
Q 024230          227 -----MGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       227 -----~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                           .+.+...+|++.+...+.........++++++.++..+.
T Consensus       225 ~~g~~~rd~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~s  268 (338)
T d1udca_         225 EDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNS  268 (338)
T ss_dssp             TTSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSSCEE
T ss_pred             CCCCceeeEEEEeehhhhccccccccccccCcceeeecCCCCCc
Confidence                 111346789987776655433444678899998887654

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.77  E-value=2e-17  Score=145.01  Aligned_cols=174  Identities=13%  Similarity=0.106  Sum_probs=126.2

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhH----------------HHHHHHHHH-hcCCeEEEEEccCCCHH
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETE----------------LNECIHHLQ-MKGLKVTGSVCDVSSRP   82 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~----------------~~~~~~~~~-~~~~~~~~~~~D~~~~~   82 (270)
                      ||+||||||+|.||.+++++|+++|++|+++|.-...                ..+...... ..+.++.++.+|++|.+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   80 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence            7999999999999999999999999999998632111                111111111 12457899999999999


Q ss_pred             HHHHHHHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc-EEEEecCcccc
Q 024230           83 QRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAA-SIVLMSSALGI  161 (270)
Q Consensus        83 ~~~~~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g-~ii~iss~~~~  161 (270)
                      .++++++..      ++|+++|.|+.... +....+.+.....+.+|+.++.++++++    ++.+.. .+++.||...+
T Consensus        81 ~l~~~~~~~------~~d~ViHlAa~~~~-~~s~~~~~~~~~~~~~Nv~gt~nll~~~----~~~~~~~~~i~~ss~~~~  149 (393)
T d1i24a_          81 FLAESFKSF------EPDSVVHFGEQRSA-PYSMIDRSRAVYTQHNNVIGTLNVLFAI----KEFGEECHLVKLGTMGEY  149 (393)
T ss_dssp             HHHHHHHHH------CCSEEEECCSCCCH-HHHTSCHHHHHHHHHHHHHHHHHHHHHH----HHHCTTCEEEEECCGGGG
T ss_pred             HHHHHHHhh------cchheecccccccc-ccccccccccccccccccccccHHHHHH----HHhccccceeeccccccc
Confidence            999988753      78999999987432 2233456777788999999999998887    443333 45666655443


Q ss_pred             cc------------------------CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCC
Q 024230          162 VS------------------------ANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPF  207 (270)
Q Consensus       162 ~~------------------------~~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~  207 (270)
                      ..                        ......|+.||.+.+.+++.++++.   ++++..+.|+.+..+-
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---~l~~~~lR~~~v~G~~  216 (393)
T d1i24a_         150 GTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVK  216 (393)
T ss_dssp             CCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSC
T ss_pred             cccccccccccccccccccccccccccccccHHHHHhhhhccccccccccc---ceeeeecccccccCCC
Confidence            21                        1122369999999999999887764   7899999988777653

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.76  E-value=3.3e-17  Score=141.20  Aligned_cols=224  Identities=19%  Similarity=0.139  Sum_probs=152.1

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK--GLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      +.--+||+||||||+|.||..++++|+++|++|+.+.|+..+...+.......  ......+..|+.+.+++..++    
T Consensus         6 ~~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~----   81 (342)
T d1y1pa1           6 AVLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVI----   81 (342)
T ss_dssp             CSSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTT----
T ss_pred             CCCCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhc----
Confidence            34456999999999999999999999999999999999987766554433322  344556778999988776665    


Q ss_pred             HHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEecCccccccCC------
Q 024230           93 SLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRAS-GAASIVLMSSALGIVSAN------  165 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~ii~iss~~~~~~~~------  165 (270)
                          ..+|.++|+++....    ..+.   .+.+..|+.++.++++.+    .+. +..++|++||..+.....      
T Consensus        82 ----~~~~~v~~~a~~~~~----~~~~---~~~~~~nv~gt~~ll~~~----~~~~~v~~~i~~SS~~~~~~~~~~~~~~  146 (342)
T d1y1pa1          82 ----KGAAGVAHIASVVSF----SNKY---DEVVTPAIGGTLNALRAA----AATPSVKRFVLTSSTVSALIPKPNVEGI  146 (342)
T ss_dssp             ----TTCSEEEECCCCCSC----CSCH---HHHHHHHHHHHHHHHHHH----HTCTTCCEEEEECCGGGTCCCCTTCCCC
T ss_pred             ----ccchhhhhhcccccc----cccc---cccccchhhhHHHHHHhh----hcccccccccccccceeeccCCCCCCCc
Confidence                568999999987542    1233   355778999999998887    343 456899999976432110      


Q ss_pred             -------------------------CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChh---h
Q 024230          166 -------------------------VGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGK---F  217 (270)
Q Consensus       166 -------------------------~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~---~  217 (270)
                                               ....|+.+|.+.+.+++.+++... .++++..+.|+.+..+..........   +
T Consensus       147 ~~~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~  225 (342)
T d1y1pa1         147 YLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK-PHFTLNAVLPNYTIGTIFDPETQSGSTSGW  225 (342)
T ss_dssp             EECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC-CSSEEEEEEESEEECCCSCTTTCCCHHHHH
T ss_pred             cccccccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcc-cccccceecccceeCCCCCccccccchHHH
Confidence                                     123699999999999999888764 46888888888776653322211111   1


Q ss_pred             HHHHhh--------cCCCCCCCChHhHHHHHHHHhCCCCCCccCcEEeecC
Q 024230          218 VDEVKS--------RTPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDG  260 (270)
Q Consensus       218 ~~~~~~--------~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdg  260 (270)
                      ...+..        .........++|++++++..+..  ....|+.+...+
T Consensus       226 ~~~l~~g~~~~~~~~~~~~~~v~v~Dva~~~i~~l~~--~~~~g~~~~~~~  274 (342)
T d1y1pa1         226 MMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVL--PQIERRRVYGTA  274 (342)
T ss_dssp             HHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHC--TTCCSCEEEECC
T ss_pred             HHHHHcCCcCcccCCccceeeeeHHHHHHHHHHhhcC--ccccceEEEEcC
Confidence            111111        11112245689999997766632  234666654443

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.76  E-value=3.7e-18  Score=148.43  Aligned_cols=227  Identities=15%  Similarity=0.121  Sum_probs=157.8

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCe-EEEeeCChhHHH-HHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGAT-VHTCSRTETELN-ECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~-v~l~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      ++||||||+|.||.+|+++|+++|++ |+++++...... .....+. ...++.++.+|++|.+.+..+++.      .+
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~l~~~~~~------~~   73 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDIS-ESNRYNFEHADICDSAEITRIFEQ------YQ   73 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTT-TCTTEEEEECCTTCHHHHHHHHHH------HC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhh-hcCCcEEEEccCCCHHHHHHHHHh------CC
Confidence            36999999999999999999999997 455554322110 0011111 134688999999999998888864      37


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEecCccccccC---------
Q 024230           99 LNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRAS-----GAASIVLMSSALGIVSA---------  164 (270)
Q Consensus        99 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-----~~g~ii~iss~~~~~~~---------  164 (270)
                      +|++||+|+.....    .+.++..+.+++|+.++.++++++...-...     +..++|++||...+...         
T Consensus        74 ~d~VihlAa~~~~~----~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~  149 (361)
T d1kewa_          74 PDAVMHLAAESHVD----RSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENS  149 (361)
T ss_dssp             CSEEEECCSCCCHH----HHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTT
T ss_pred             CCEEEECccccchh----hHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccc
Confidence            99999999874321    2334456789999999999999987654331     23589999998765321         


Q ss_pred             ------------CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCC-----
Q 024230          165 ------------NVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPM-----  227 (270)
Q Consensus       165 ------------~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-----  227 (270)
                                  .....|+.||.+.+.+++.++..+   |+.+..+.|+.+..|....-.-.+.+..+.....+.     
T Consensus       150 ~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~---~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~  226 (361)
T d1kewa_         150 VTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGK  226 (361)
T ss_dssp             SCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETT
T ss_pred             cCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCC
Confidence                        113459999999999999988664   799999999988887442211112333333333221     


Q ss_pred             ----CCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCccc
Q 024230          228 ----GRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTV  264 (270)
Q Consensus       228 ----~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~  264 (270)
                          +.+...+|+++++..++...   ..|+.+++.+|...
T Consensus       227 g~~~r~~i~v~D~a~ai~~~~~~~---~~~~~~Ni~s~~~~  264 (361)
T d1kewa_         227 GDQIRDWLYVEDHARALHMVVTEG---KAGETYNIGGHNEK  264 (361)
T ss_dssp             SCCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEECCCCEE
T ss_pred             CCeEEeCEEHHHHHHHHHHHHhcC---CCCCeEEECCCCCc
Confidence                12357899999998888543   35788999887654

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.74  E-value=1.5e-16  Score=136.72  Aligned_cols=228  Identities=13%  Similarity=0.044  Sum_probs=159.2

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChh----HHHHHHHHHH-hcCCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTET----ELNECIHHLQ-MKGLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~----~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      .+.|++|||||+|.||++++++|.++|++|+.++|...    .......... .....+.++..|+.|........    
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~----   89 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC----   89 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH----
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccc----
Confidence            45689999999999999999999999999999986332    2222211111 11246888999999987655444    


Q ss_pred             HHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCC-------
Q 024230           93 SLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSAN-------  165 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~-------  165 (270)
                          ...+.++|+++.....    .+.++....+++|+.++.++++++    .+.+..++|++||...+...+       
T Consensus        90 ----~~~~~v~~~~a~~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~E~  157 (341)
T d1sb8a_          90 ----AGVDYVLHQAALGSVP----RSINDPITSNATNIDGFLNMLIAA----RDAKVQSFTYAASSSTYGDHPGLPKVED  157 (341)
T ss_dssp             ----TTCSEEEECCSCCCHH----HHHHCHHHHHHHHTHHHHHHHHHH----HHTTCSEEEEEEEGGGGTTCCCSSBCTT
T ss_pred             ----cccccccccccccccc----ccccCccchhheeehhHHHHHHHH----HhcCCceEEEcccceeeCCCCCCCccCC
Confidence                5788888888764321    245566778999999999999888    445556899999987654322       


Q ss_pred             ----CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCCh----hhHHHHhhcCC---------CC
Q 024230          166 ----VGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNG----KFVDEVKSRTP---------MG  228 (270)
Q Consensus       166 ----~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~----~~~~~~~~~~~---------~~  228 (270)
                          ....|+.+|.+.+.+++.+++..   ++++..+.|+.+..+....-....    ..........+         .+
T Consensus       158 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r  234 (341)
T d1sb8a_         158 TIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSR  234 (341)
T ss_dssp             CCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEE
T ss_pred             CCCCCCCcchHHHHHHHHHHHHHHHHh---CCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEE
Confidence                23689999999999999988764   688999999988776443222221    22222222221         22


Q ss_pred             CCCChHhHHHHHHHHhCCCCCCccCcEEeecCCcccc
Q 024230          229 RLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       229 ~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                      .+..++|++.++..+..... ...|+.+++..+...+
T Consensus       235 ~~i~v~D~~~a~~~~~~~~~-~~~~~~~~~~~~~~~s  270 (341)
T d1sb8a_         235 DFCYIENTVQANLLAATAGL-DARNQVYNIAVGGRTS  270 (341)
T ss_dssp             CCEEHHHHHHHHHHHHTCCG-GGCSEEEEESCSCCEE
T ss_pred             EEEEEeccchhhhhhhhccc-cccceeeeecccccch
Confidence            35668999999888775432 3568888887765543

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=6.8e-17  Score=139.16  Aligned_cols=230  Identities=14%  Similarity=0.104  Sum_probs=157.5

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCC------hhHHHHHHHHHH-hcCCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRT------ETELNECIHHLQ-MKGLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~------~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      .|+||||||+|.||.+|+++|+++|++|+.+++.      ........+.+. ....++.++.+|++|.+.+..++..  
T Consensus         2 ~kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~--   79 (346)
T d1ek6a_           2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK--   79 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH--
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccc--
Confidence            3899999999999999999999999999998641      111111111111 1245788999999999998887765  


Q ss_pred             HHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCC-------
Q 024230           93 SLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSAN-------  165 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~-------  165 (270)
                          ..+++++|+|+.....    .+.++..+.+++|+.++.++++++    .+.+..+++++||...+....       
T Consensus        80 ----~~~~~i~h~Aa~~~~~----~~~~~p~~~~~~Nv~gt~~l~~~~----~~~~v~~~i~~ss~~~~~~~~~~~~~~~  147 (346)
T d1ek6a_          80 ----YSFMAVIHFAGLKAVG----ESVQKPLDYYRVNLTGTIQLLEIM----KAHGVKNLVFSSSATVYGNPQYLPLDEA  147 (346)
T ss_dssp             ----CCEEEEEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGGCSCSSSSBCTT
T ss_pred             ----cccccccccccccCcH----hhHhCHHHHHHhhhcccccccchh----hhcCcccccccccceeeecccccccccc
Confidence                5789999999975422    223345677899999999998887    555666899988886653321       


Q ss_pred             -----CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCcccc------CChhhHHHHh-----hcC----
Q 024230          166 -----VGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLL------GNGKFVDEVK-----SRT----  225 (270)
Q Consensus       166 -----~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~------~~~~~~~~~~-----~~~----  225 (270)
                           ....|+.+|.+.+...+.+++.  ..++....+.|+.+..+......      ........+.     ...    
T Consensus       148 ~~~~~~~~~Y~~~k~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i  225 (346)
T d1ek6a_         148 HPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNV  225 (346)
T ss_dssp             SCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEE
T ss_pred             ccccccCChHHHHHHHHHHHHHHHHHh--ccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEE
Confidence                 2346999999999998887653  34788888888777665332111      1111121111     010    


Q ss_pred             -----------CCCCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCcccc
Q 024230          226 -----------PMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       226 -----------~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                                 ..+.+..++|++.++..+.........++++++.+|....
T Consensus       226 ~g~~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s  276 (346)
T d1ek6a_         226 FGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYS  276 (346)
T ss_dssp             ECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEE
T ss_pred             cCCcccCCCCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCccc
Confidence                       0123567999999988876554555678899999887654

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.73  E-value=7.4e-17  Score=139.09  Aligned_cols=172  Identities=16%  Similarity=0.103  Sum_probs=126.7

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHH-HHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETEL-NECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      |+||||||+|.||.+++++|+++|++|+++++..... ......-.....++.++.+|++|.++++.+++.      .++
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~------~~~   75 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKE------YKI   75 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHH------SCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhc------cCC
Confidence            8999999999999999999999999999987633221 111111111235678889999999999988865      479


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC---------------
Q 024230          100 NIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA---------------  164 (270)
Q Consensus       100 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~---------------  164 (270)
                      |++||+|+.....    ...+.-...+.+|+.++.++++++    ++.+..++|++||...+...               
T Consensus        76 d~VihlAa~~~~~----~~~~~~~~~~~~N~~~t~~ll~~~----~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~  147 (347)
T d1z45a2          76 DSVIHFAGLKAVG----ESTQIPLRYYHNNILGTVVLLELM----QQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPL  147 (347)
T ss_dssp             CEEEECCSCCCHH----HHHHSHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCC
T ss_pred             CEEEEcccccccc----ccccCcccccccchhhhHHHHHHH----HhcccceEEeecceeeecCcccCCCCCccccccCC
Confidence            9999999975321    123344567889999999999988    44445589999997765321               


Q ss_pred             CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCC
Q 024230          165 NVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPF  207 (270)
Q Consensus       165 ~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~  207 (270)
                      .....|+.||.+.+.+++.+.+.. ..++.+..+.|+.+..+.
T Consensus       148 ~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~~lR~~~v~g~~  189 (347)
T d1z45a2         148 GPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGAH  189 (347)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECCC
T ss_pred             CCCChhHhHHHHHHHHHHHHHHhh-ccCCcEEEEeecceEeec
Confidence            123469999999999998887543 346888888877666543

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=2e-16  Score=126.58  Aligned_cols=199  Identities=13%  Similarity=0.087  Sum_probs=133.9

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      |..|+|+||||+|.||++++++|+++|++|.++.|+++++...      ....+.++.+|++|.+++.+++        .
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~------~~~~~~~~~gD~~d~~~l~~al--------~   66 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE------GPRPAHVVVGDVLQAADVDKTV--------A   66 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS------SCCCSEEEESCTTSHHHHHHHH--------T
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc------cccccccccccccchhhHHHHh--------c
Confidence            3568999999999999999999999999999999998875321      1245778999999999988777        5


Q ss_pred             cccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCC----hhhhhh
Q 024230           98 KLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG----TVYSAT  173 (270)
Q Consensus        98 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~----~~y~~s  173 (270)
                      ..|++|+++|........           .++..+..+++    +.+++.+..++|++||...+...+..    ..|...
T Consensus        67 ~~d~vi~~~g~~~~~~~~-----------~~~~~~~~~l~----~aa~~~~v~r~i~~ss~~~~~~~~~~~~~~~~~~~~  131 (205)
T d1hdoa_          67 GQDAVIVLLGTRNDLSPT-----------TVMSEGARNIV----AAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDD  131 (205)
T ss_dssp             TCSEEEECCCCTTCCSCC-----------CHHHHHHHHHH----HHHHHHTCCEEEEECCGGGTSCTTCSCGGGHHHHHH
T ss_pred             CCCEEEEEeccCCchhhh-----------hhhHHHHHHHH----HHHHhcCCCeEEEEeeeeccCCCccccccccccchH
Confidence            689999999875332111           13334444444    44467777899999988765544332    234555


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCCCCccC
Q 024230          174 KGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAASYITG  253 (270)
Q Consensus       174 Kaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  253 (270)
                      |.+.+.+.       ...+++...|.||.+...-.....   ..   ...........+.+|+|+.++..+... . ..|
T Consensus       132 ~~~~e~~l-------~~~~~~~tiirp~~~~~~~~~~~~---~~---~~~~~~~~~~i~~~DvA~~~~~~l~~~-~-~~g  196 (205)
T d1hdoa_         132 HIRMHKVL-------RESGLKYVAVMPPHIGDQPLTGAY---TV---TLDGRGPSRVISKHDLGHFMLRCLTTD-E-YDG  196 (205)
T ss_dssp             HHHHHHHH-------HHTCSEEEEECCSEEECCCCCSCC---EE---ESSSCSSCSEEEHHHHHHHHHHTTSCS-T-TTT
T ss_pred             HHHHHHHH-------HhcCCceEEEecceecCCCCcccE---EE---eeCCCCCCCcCCHHHHHHHHHHHhCCC-C-CCC
Confidence            55544333       346899999999977543221110   00   001111123457899999999988543 2 468


Q ss_pred             cEEeecC
Q 024230          254 QTVCIDG  260 (270)
Q Consensus       254 ~~i~vdg  260 (270)
                      +.+.+.+
T Consensus       197 ~~~~~s~  203 (205)
T d1hdoa_         197 HSTYPSH  203 (205)
T ss_dssp             CEEEEEC
T ss_pred             EEEecCC
Confidence            8877653

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.72  E-value=6e-17  Score=137.88  Aligned_cols=221  Identities=14%  Similarity=0.050  Sum_probs=147.9

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHH-HHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELN-ECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      |+||||||+|.||++++++|+++|++|+.++|...... ...+.+. ...++.++.+|++|.+++.+.+..      ...
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~------~~~   73 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG-IEGDIQYEDGDMADACSVQRAVIK------AQP   73 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHH------HCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhc-ccCCcEEEEccccChHHhhhhhcc------ccc
Confidence            79999999999999999999999999999998654311 1112221 124688999999999998887765      367


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc-EEEEecCccccccC------------CC
Q 024230          100 NIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAA-SIVLMSSALGIVSA------------NV  166 (270)
Q Consensus       100 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g-~ii~iss~~~~~~~------------~~  166 (270)
                      ++++++++......    ..++..+.+..|+.++.+++.++    .+.+.. ++++.||. ++.+.            ..
T Consensus        74 ~~~~~~a~~~~~~~----~~~~~~~~~~~n~~g~~~~l~~~----~~~~~~~~~i~~Ss~-~~~~~~~~~~~~E~~~~~p  144 (321)
T d1rpna_          74 QEVYNLAAQSFVGA----SWNQPVTTGVVDGLGVTHLLEAI----RQFSPETRFYQASTS-EMFGLIQAERQDENTPFYP  144 (321)
T ss_dssp             SEEEECCSCCCHHH----HTTSHHHHHHHHTHHHHHHHHHH----HHHCTTSEEEEEEEG-GGGCSCSSSSBCTTSCCCC
T ss_pred             cccccccccccccc----cccchHHHHhhhhhchHHHHHHH----HHhCCCcccccccch-hhcCcccCCCCCCCCCccc
Confidence            78888887644321    11234677899999999998888    344333 45555554 33321            12


Q ss_pred             ChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCCh---hhHHHHhh-c-CC--------CCCCCCh
Q 024230          167 GTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNG---KFVDEVKS-R-TP--------MGRLGEP  233 (270)
Q Consensus       167 ~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~---~~~~~~~~-~-~~--------~~~~~~~  233 (270)
                      ...|+.+|.+.+.+++.+..+.   ++++..+.|+.+..|.........   ........ . ..        .+.+...
T Consensus       145 ~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v  221 (321)
T d1rpna_         145 RSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFA  221 (321)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEH
T ss_pred             cChhHHHHHHHHHHHHHHHhhc---CCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEe
Confidence            4679999999999999988764   688888888877776432211111   11111111 1 11        1124678


Q ss_pred             HhHHHHHHHHhCCCCCCccCcEEeecCCccc
Q 024230          234 KEVSSLVAFLCMPAASYITGQTVCIDGGFTV  264 (270)
Q Consensus       234 ~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~  264 (270)
                      +|+++++..++...    .+..+++.+|...
T Consensus       222 ~D~~~~~~~~~~~~----~~~~~ni~~~~~~  248 (321)
T d1rpna_         222 GDYVEAMWLMLQQD----KADDYVVATGVTT  248 (321)
T ss_dssp             HHHHHHHHHHHHSS----SCCCEEECCSCEE
T ss_pred             HHHHHHHHHHHhcC----CcCCceecccccc
Confidence            99999999988543    2455677766543

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.72  E-value=2.9e-16  Score=136.05  Aligned_cols=222  Identities=16%  Similarity=0.056  Sum_probs=156.5

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      |+ ++++||||||+|.||.+|+++|.++|++|+.+++......      ...-....+..+|+.+.+++..++       
T Consensus        12 ~~-~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~------~~~~~~~~~~~~D~~~~~~~~~~~-------   77 (363)
T d2c5aa1          12 PS-ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM------TEDMFCDEFHLVDLRVMENCLKVT-------   77 (363)
T ss_dssp             TT-SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS------CGGGTCSEEEECCTTSHHHHHHHH-------
T ss_pred             CC-CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch------hhhcccCcEEEeechhHHHHHHHh-------
Confidence            44 8889999999999999999999999999999987544311      011123456778999888766555       


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCC----------
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSAN----------  165 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~----------  165 (270)
                       .++|.+||+|+........   .+.....+..|+.++.+++.++    .+.+..++|++||...+....          
T Consensus        78 -~~~d~Vih~a~~~~~~~~~---~~~~~~~~~~n~~gt~~ll~~~----~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~  149 (363)
T d2c5aa1          78 -EGVDHVFNLAADMGGMGFI---QSNHSVIMYNNTMISFNMIEAA----RINGIKRFFYASSACIYPEFKQLETTNVSLK  149 (363)
T ss_dssp             -TTCSEEEECCCCCCCHHHH---TTCHHHHHHHHHHHHHHHHHHH----HHTTCSEEEEEEEGGGSCGGGSSSSSSCEEC
T ss_pred             -hcCCeEeeccccccccccc---ccccccccccccchhhHHHHhH----HhhCccccccccccccccccccccccccccc
Confidence             5789999999875432211   2234567889999999998888    555567899999987754321          


Q ss_pred             --------CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHH-----HHhhc--------
Q 024230          166 --------VGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVD-----EVKSR--------  224 (270)
Q Consensus       166 --------~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~-----~~~~~--------  224 (270)
                              ....|+.+|.+.+.+++.+.++.   |+++..+.|+.+..+.............     .....        
T Consensus       150 ~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  226 (363)
T d2c5aa1         150 ESDAWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGD  226 (363)
T ss_dssp             GGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESC
T ss_pred             cccCCcCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCC
Confidence                    23469999999999999888764   7999999999888764332221111111     11111        


Q ss_pred             -CCCCCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCccccc
Q 024230          225 -TPMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       225 -~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                       ...+.+...+|+++++..++...    .|+.+++.+|..++.
T Consensus       227 g~~~rd~i~v~D~~~~~~~~~~~~----~~~~~ni~~~~~~s~  265 (363)
T d2c5aa1         227 GLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVSM  265 (363)
T ss_dssp             SCCEECCEEHHHHHHHHHHHHHSS----CCSCEEECCCCCEEH
T ss_pred             CCeEEEEeehhHHHHHHHHHHhCC----CCCeEEEecCCcccH
Confidence             11234567899999999888543    577889988876653

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.71  E-value=3.6e-16  Score=133.42  Aligned_cols=223  Identities=15%  Similarity=0.138  Sum_probs=145.4

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChh-HHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGATVHTCSRTET-ELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      +||||||+|.||++++++|+++|++|+.+++-.. ...+....+.. ..++.++.+|+++.+++.++++..      ++|
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~-~~~~~~i~~Di~~~~~l~~~~~~~------~~d   74 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS-LGNFEFVHGDIRNKNDVTRLITKY------MPD   74 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT-TCCCEEEECCTTCHHHHHHHHHHH------CCS
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhc-cCCcEEEEcccCCHHHHHHHHHhc------CCc
Confidence            6999999999999999999999999999875322 22222333333 357888999999999998888653      689


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCC---------------
Q 024230          101 IFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSAN---------------  165 (270)
Q Consensus       101 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~---------------  165 (270)
                      ++||+|+.....    ...++..+.+++|+.|+.++++++    .+.+..++++.+|..+..+.+               
T Consensus        75 ~Vih~aa~~~~~----~~~~~~~~~~~~Nv~gt~nll~~~----~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~  146 (338)
T d1orra_          75 SCFHLAGQVAMT----TSIDNPCMDFEINVGGTLNLLEAV----RQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCV  146 (338)
T ss_dssp             EEEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHH----HHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEET
T ss_pred             eEEeeccccccc----ccccChHHHHHHHHHHHHHHHHhh----hccccccccccccccccccccccccccccccccccc
Confidence            999999875431    123345678999999999999887    444455666666665443321               


Q ss_pred             -------------CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC---hhhHHHHhh-----c
Q 024230          166 -------------VGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN---GKFVDEVKS-----R  224 (270)
Q Consensus       166 -------------~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~---~~~~~~~~~-----~  224 (270)
                                   ....|+.+|...+.+.......+   ++....+.+..+..+........   ..+......     .
T Consensus       147 ~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (338)
T d1orra_         147 DKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGIN  223 (338)
T ss_dssp             TCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCC
T ss_pred             ccccCcccCCccccccccccccchhhhhhhhhhhcc---CcccccccccceeeccccccccccccchhhHHHHHHHhccC
Confidence                         23579999999999998888775   34444343333322211111111   112221110     0


Q ss_pred             C---------CCCCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCcc
Q 024230          225 T---------PMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFT  263 (270)
Q Consensus       225 ~---------~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~  263 (270)
                      .         ..+.+...+|++++++.++.. .....|+++.+.+|..
T Consensus       224 ~~~~~~g~g~~~r~~~~v~D~~~~~~~~l~~-~~~~~~~~~~i~~~~~  270 (338)
T d1orra_         224 KPFTISGNGKQVRDVLHAEDMISLYFTALAN-VSKIRGNAFNIGGTIV  270 (338)
T ss_dssp             CCEEEESSSCCEEECEEHHHHHHHHHHHHHT-HHHHTTCEEEESSCGG
T ss_pred             CceEEeCCCceeEeeecccchhhHHHHHHhc-cccccCcccccccccc
Confidence            0         111234589999999887743 2346788888876643

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=1e-16  Score=137.94  Aligned_cols=212  Identities=15%  Similarity=0.027  Sum_probs=142.5

Q ss_pred             CEE-EEecCCCcHHHHHHHHHHHCCCeEEEeeCChhH-----HHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           21 MTA-LVTGGTKGLGLAVVEELSMLGATVHTCSRTETE-----LNECIHHLQM-KGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        21 k~v-lItG~s~giG~~la~~l~~~G~~v~l~~r~~~~-----~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      |+| |||||+|.||.+++++|.++|++|+.++|....     .+.+....+. ...++.++.+|++|.+.+..++..   
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---   77 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINE---   77 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHH---
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhh---
Confidence            455 999999999999999999999999999996432     1111111111 124688999999999999888866   


Q ss_pred             HcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC---------
Q 024230           94 LFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA---------  164 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~---------  164 (270)
                         ..+++++|+++.....    ...+.....+++|+.++.+++.++..+-. .+..++|++||.+-+...         
T Consensus        78 ---~~~~~v~~~~a~~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~E~~  149 (347)
T d1t2aa_          78 ---VKPTEIYNLGAQSHVK----ISFDLAEYTADVDGVGTLRLLDAVKTCGL-INSVKFYQASTSELYGKVQEIPQKETT  149 (347)
T ss_dssp             ---HCCSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHTTC-TTTCEEEEEEEGGGTCSCSSSSBCTTS
T ss_pred             ---cccceeeeeeeccccc----hhhccchhhhhhHHHHHHHHHHHHHHcCC-CCCcEEEEecchheecCCCCCCCCCCC
Confidence               3678888888764322    23444566789999999999988854321 123479999987654221         


Q ss_pred             --CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHh----hcCC---------CCC
Q 024230          165 --NVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVK----SRTP---------MGR  229 (270)
Q Consensus       165 --~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~----~~~~---------~~~  229 (270)
                        .....|+.||.+.+.+++.++..   .++.+..+.|+.+..|..............+.    ...+         .+.
T Consensus       150 ~~~P~~~Yg~sK~~aE~~~~~~~~~---~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~  226 (347)
T d1t2aa_         150 PFYPRSPYGAAKLYAYWIVVNFREA---YNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRD  226 (347)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEEC
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceee
Confidence              12356999999999999998766   36888889998887764322211111111111    1111         123


Q ss_pred             CCChHhHHHHHHHHhCC
Q 024230          230 LGEPKEVSSLVAFLCMP  246 (270)
Q Consensus       230 ~~~~~dva~~~~~l~s~  246 (270)
                      +...+|+++++..++..
T Consensus       227 ~i~v~D~~~a~~~~~~~  243 (347)
T d1t2aa_         227 WGHAKDYVEAMWLMLQN  243 (347)
T ss_dssp             CEEHHHHHHHHHHHHHS
T ss_pred             eeEecHHHHHHHHHhhc
Confidence            56789999999888864

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.71  E-value=2.1e-16  Score=135.74  Aligned_cols=216  Identities=11%  Similarity=0.066  Sum_probs=151.7

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCC-CeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           22 TALVTGGTKGLGLAVVEELSMLG-ATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G-~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      +||||||+|.||++++++|+++| ++|+.+++..+......     ...++.++.+|+++.+++.+.+.       ..+|
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~-----~~~~~~~i~~Di~~~~~~~~~~~-------~~~d   69 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHV-------KKCD   69 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-----TCTTEEEEECCTTTCSHHHHHHH-------HHCS
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc-----cCCCeEEEECccCChHHHHHHHH-------hCCC
Confidence            69999999999999999999999 58999988765433221     13579999999998766544331       3589


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCC---------------
Q 024230          101 IFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSAN---------------  165 (270)
Q Consensus       101 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~---------------  165 (270)
                      ++||+|+.....    ...++....+++|+.++.++++++    .+.+ -+++++||...+...+               
T Consensus        70 ~Vih~a~~~~~~----~~~~~~~~~~~~nv~gt~~ll~~~----~~~~-~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~  140 (342)
T d2blla1          70 VVLPLVAIATPI----EYTRNPLRVFELDFEENLRIIRYC----VKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGP  140 (342)
T ss_dssp             EEEECBCCCCHH----HHHHSHHHHHHHHTHHHHHHHHHH----HHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCC
T ss_pred             cccccccccccc----ccccCCcccccccccccccccccc----cccc-ccccccccccccccccccccccccccccccc
Confidence            999999975432    122334567999999999999988    3443 4566777766543321               


Q ss_pred             ---CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC--------hhhHHHHhhcC---------
Q 024230          166 ---VGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN--------GKFVDEVKSRT---------  225 (270)
Q Consensus       166 ---~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~--------~~~~~~~~~~~---------  225 (270)
                         ....|+.||.+.+.+++.+++..   |+.+..+.|..+..+........        ..+...+....         
T Consensus       141 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~  217 (342)
T d2blla1         141 VNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGK  217 (342)
T ss_dssp             TTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSC
T ss_pred             cCCCcchhhhcccchhhhhhhhhccc---CceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCC
Confidence               12469999999999999988774   78888888887777644333211        12222222221         


Q ss_pred             CCCCCCChHhHHHHHHHHhCCCCCCccCcEEeecCC
Q 024230          226 PMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGG  261 (270)
Q Consensus       226 ~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG  261 (270)
                      ..+.+...+|+++++..++........|+++++.+|
T Consensus       218 ~~r~~i~v~D~~~a~~~~~~~~~~~~~g~~~Nig~~  253 (342)
T d2blla1         218 QKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNP  253 (342)
T ss_dssp             CEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCT
T ss_pred             eeeeecccccccceeeeehhhccccCCCeEEEEecc
Confidence            122356799999999999876545567999999654

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.70  E-value=2.1e-16  Score=135.33  Aligned_cols=214  Identities=16%  Similarity=0.061  Sum_probs=144.0

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChh-----HHHHHHHHHH-hcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTET-----ELNECIHHLQ-MKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~-----~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      |++|||||+|.||.+++++|+++|++|+.++|...     ....+..... .....+.++.+|+++.+++...++.    
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~----   77 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDV----   77 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHH----
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhh----
Confidence            89999999999999999999999999999998532     1111111111 1135688899999999998888865    


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecCccccccC---------
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIVSA---------  164 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss~~~~~~~---------  164 (270)
                        .++|+++|+|+.....    ...++....+..|+.+...++.++.....+.. ..+++..||.......         
T Consensus        78 --~~~D~Vih~Aa~~~~~----~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~~~  151 (339)
T d1n7ha_          78 --IKPDEVYNLAAQSHVA----VSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTP  151 (339)
T ss_dssp             --HCCSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSC
T ss_pred             --hccchhhhcccccccc----ccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCCCC
Confidence              3789999999975321    12344567889999999999988865544433 2345555444322111         


Q ss_pred             -CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHH---HHh-hcCC---------CCCC
Q 024230          165 -NVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVD---EVK-SRTP---------MGRL  230 (270)
Q Consensus       165 -~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~---~~~-~~~~---------~~~~  230 (270)
                       .....|+.+|.+.+.+++...+.   .++.+..+.|+.+..|.............   ... ...+         .+.+
T Consensus       152 ~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~  228 (339)
T d1n7ha_         152 FHPRSPYAASKCAAHWYTVNYREA---YGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDW  228 (339)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEEC
T ss_pred             CCCcchhhHHHHHHHHHHHHHHHH---hCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccc
Confidence             23457999999999999988776   36999999999888875432211111111   111 1111         1124


Q ss_pred             CChHhHHHHHHHHhCCC
Q 024230          231 GEPKEVSSLVAFLCMPA  247 (270)
Q Consensus       231 ~~~~dva~~~~~l~s~~  247 (270)
                      ...+|+++++..++...
T Consensus       229 ~~v~D~a~~~~~~~~~~  245 (339)
T d1n7ha_         229 GFAGDYVEAMWLMLQQE  245 (339)
T ss_dssp             EEHHHHHHHHHHHHTSS
T ss_pred             eeeehHHHHHHHHHhcC
Confidence            56899999999888653

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.70  E-value=1.9e-16  Score=135.07  Aligned_cols=222  Identities=16%  Similarity=0.132  Sum_probs=153.8

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeE------EEeeCChhHH-HHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATV------HTCSRTETEL-NECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v------~l~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      ++||||||+|.||.+++++|+++|+.|      +.++...... ......+ ....++.++..|+++........     
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~-----   74 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPV-DADPRLRFVHGDIRDAGLLAREL-----   74 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGG-TTCTTEEEEECCTTCHHHHHHHT-----
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhh-hcCCCeEEEEeccccchhhhccc-----
Confidence            369999999999999999999999854      3333221100 0000111 12356889999999987665443     


Q ss_pred             HcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCC--------
Q 024230           94 LFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSAN--------  165 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~--------  165 (270)
                         ..+|.++|+|+.....    ...+...+.+++|+.++.++++++    .+.+..++|++||...+.+..        
T Consensus        75 ---~~~d~vi~~a~~~~~~----~~~~~~~~~~~~N~~gt~~ll~~~----~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~  143 (322)
T d1r6da_          75 ---RGVDAIVHFAAESHVD----RSIAGASVFTETNVQGTQTLLQCA----VDAGVGRVVHVSTNQVYGSIDSGSWTESS  143 (322)
T ss_dssp             ---TTCCEEEECCSCCCHH----HHHHCCHHHHHHHTHHHHHHHHHH----HHTTCCEEEEEEEGGGGCCCSSSCBCTTS
T ss_pred             ---cccceEEeeccccccc----ccccchHHHhhhhHHHHHHHHHHH----HHcCCceEEEeecceeecCCCCCCCCCCC
Confidence               5789999999875332    233445667889999999998888    455567899999987764432        


Q ss_pred             ---CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCC---------CCCCCh
Q 024230          166 ---VGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPM---------GRLGEP  233 (270)
Q Consensus       166 ---~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~  233 (270)
                         ....|+.+|.+.+.+++.++++.   ++++..+.|+.+..|....-.-.+.+........+.         +.+...
T Consensus       144 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v  220 (322)
T d1r6da_         144 PLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHT  220 (322)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEH
Confidence               23579999999999999998764   799999999999886432211112333333332221         124468


Q ss_pred             HhHHHHHHHHhCCCCCCccCcEEeecCCcccc
Q 024230          234 KEVSSLVAFLCMPAASYITGQTVCIDGGFTVN  265 (270)
Q Consensus       234 ~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  265 (270)
                      +|+++++..++...   -.|+++++.+|....
T Consensus       221 ~D~a~ai~~~~~~~---~~~~~~ni~~~~~~s  249 (322)
T d1r6da_         221 DDHCRGIALVLAGG---RAGEIYHIGGGLELT  249 (322)
T ss_dssp             HHHHHHHHHHHHHC---CTTCEEEECCCCEEE
T ss_pred             HHHHHHHHHHHhCC---CCCCeeEEeecccch
Confidence            99999999999654   358899998887654

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.70  E-value=3.5e-16  Score=132.78  Aligned_cols=190  Identities=12%  Similarity=0.096  Sum_probs=136.5

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      -|+||||||+|.||++|+++|+++|+.|+++++..+                    +|+.+.+.++++++.      .++
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~--------------------~~~~~~~~~~~~~~~------~~~   55 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE--------------------LNLLDSRAVHDFFAS------ERI   55 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT--------------------CCTTCHHHHHHHHHH------HCC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchh--------------------ccccCHHHHHHHHhh------cCC
Confidence            378999999999999999999999999888765422                    589999888877753      478


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCC--------------
Q 024230          100 NIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSAN--------------  165 (270)
Q Consensus       100 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~--------------  165 (270)
                      |.++|+|+......   ....+..+.+++|+.++.++++++    .+.+..++|++||.+.+.+..              
T Consensus        56 d~v~~~a~~~~~~~---~~~~~~~~~~~~Nv~gt~~ll~~a----~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~  128 (315)
T d1e6ua_          56 DQVYLAAAKVGGIV---ANNTYPADFIYQNMMIESNIIHAA----HQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTL  128 (315)
T ss_dssp             SEEEECCCCCCCHH---HHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCC
T ss_pred             CEEEEcchhccccc---cchhhHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEECCceEcCCCCCCCccCCccccCCC
Confidence            99999987643211   123444566889999999998888    445556899999988764321              


Q ss_pred             --CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHH---------Hh---------hcC
Q 024230          166 --VGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDE---------VK---------SRT  225 (270)
Q Consensus       166 --~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~---------~~---------~~~  225 (270)
                        ....|+.||.+.+.+++.+.++.   |+++..+.|+.+..|..............         ..         ...
T Consensus       129 ~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~  205 (315)
T d1e6ua_         129 EPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGT  205 (315)
T ss_dssp             CGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSC
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCc
Confidence              12469999999999999998764   79999999998887754332222111110         00         011


Q ss_pred             CCCCCCChHhHHHHHHHHhC
Q 024230          226 PMGRLGEPKEVSSLVAFLCM  245 (270)
Q Consensus       226 ~~~~~~~~~dva~~~~~l~s  245 (270)
                      +.......+|++.++..+..
T Consensus       206 ~~~~~~~v~d~~~~~~~~~~  225 (315)
T d1e6ua_         206 PMREFLHVDDMAAASIHVME  225 (315)
T ss_dssp             CEECEEEHHHHHHHHHHHHH
T ss_pred             eEEEEEEeehhHHHHHHhhh
Confidence            22344568999998887763

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=1.6e-16  Score=135.16  Aligned_cols=216  Identities=14%  Similarity=0.083  Sum_probs=144.1

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      |+||||||+|.||++++++|+++|++|+.+++......+...... ...++.....|+.+.     +       + .++|
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~-----~-------~-~~~d   67 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI-GHENFELINHDVVEP-----L-------Y-IEVD   67 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT-TCTTEEEEECCTTSC-----C-------C-CCCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhc-CCCceEEEehHHHHH-----H-------H-cCCC
Confidence            899999999999999999999999999999863221111111111 122344555555332     1       2 4799


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC----------------
Q 024230          101 IFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA----------------  164 (270)
Q Consensus       101 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~----------------  164 (270)
                      ++||+|+....... .   ++..+.+++|+.++.++++++.    +.+ -++|++||.+.+...                
T Consensus        68 ~VihlAa~~~~~~~-~---~~~~~~~~~Nv~g~~~ll~~~~----~~~-~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~  138 (312)
T d2b69a1          68 QIYHLASPASPPNY-M---YNPIKTLKTNTIGTLNMLGLAK----RVG-ARLLLASTSEVYGDPEVHPQSEDYWGHVNPI  138 (312)
T ss_dssp             EEEECCSCCSHHHH-T---TCHHHHHHHHHHHHHHHHHHHH----HHT-CEEEEEEEGGGGBSCSSSSBCTTCCCBCCSS
T ss_pred             EEEECcccCCchhH-H---hCHHHHHHHHHHHHHHHHHHHH----HcC-CcEEEEEChheecCCCCCCCCccccCCCCCC
Confidence            99999997543211 1   2345678999999999998873    333 379999987665321                


Q ss_pred             CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC--hhhHHHHhhcCC---------CCCCCCh
Q 024230          165 NVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN--GKFVDEVKSRTP---------MGRLGEP  233 (270)
Q Consensus       165 ~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~--~~~~~~~~~~~~---------~~~~~~~  233 (270)
                      .....|+.||.+.+.+++.+++.+   |+++..+.|+.+..|........  +.+..+.....+         ...+...
T Consensus       139 ~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v  215 (312)
T d2b69a1         139 GPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYV  215 (312)
T ss_dssp             STTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEH
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHh---CCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEH
Confidence            124579999999999999988774   79999999999988754332111  223333322221         1234568


Q ss_pred             HhHHHHHHHHhCCCCCCccCcEEeecCCccccc
Q 024230          234 KEVSSLVAFLCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       234 ~dva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                      +|+++++..++...    .+..+++.+|..+..
T Consensus       216 ~D~~~~~~~~~~~~----~~~~~n~~~~~~~~~  244 (312)
T d2b69a1         216 SDLVNGLVALMNSN----VSSPVNLGNPEEHTI  244 (312)
T ss_dssp             HHHHHHHHHHHTSS----CCSCEEESCCCEEEH
T ss_pred             HHHHHHHHHHHhhc----cCCceEecCCcccch
Confidence            99999998888433    456788888876543

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.68  E-value=1.6e-16  Score=136.90  Aligned_cols=219  Identities=17%  Similarity=0.102  Sum_probs=145.3

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh--hH-HHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTE--TE-LNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~--~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      .|+||||||+|.||.+++++|.++|+.|.++.++.  .. .......  -.+.++.++.+|++|.+.+..++        
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~--~~~~~i~~~~~Di~d~~~~~~~~--------   71 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEA--ILGDRVELVVGDIADAELVDKLA--------   71 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGG--GCSSSEEEEECCTTCHHHHHHHH--------
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHH--hhcCCeEEEEccCCCHHHHHHHH--------
Confidence            57999999999999999999999998755554321  11 0000010  12457899999999998888776        


Q ss_pred             CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC------------
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA------------  164 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~------------  164 (270)
                      ...|.++|+|+......    ..++..+.+++|+.++.+++.++.    +.+ .++|++||...+...            
T Consensus        72 ~~~~~v~~~a~~~~~~~----~~~~~~~~~~~N~~g~~nll~~~~----~~~-~k~i~~ss~~vyg~~~~~~~~~~~~~~  142 (346)
T d1oc2a_          72 AKADAIVHYAAESHNDN----SLNDPSPFIHTNFIGTYTLLEAAR----KYD-IRFHHVSTDEVYGDLPLREDLPGHGEG  142 (346)
T ss_dssp             TTCSEEEECCSCCCHHH----HHHCCHHHHHHHTHHHHHHHHHHH----HHT-CEEEEEEEGGGGCCBCCGGGSTTTTCS
T ss_pred             hhhhhhhhhhhcccccc----hhhCcccceeeehHhHHhhhhhhc----ccc-ccccccccceEecccCccccccccccC
Confidence            46788999988754321    123345778999999999988773    333 467887777654321            


Q ss_pred             -----------CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcC--------
Q 024230          165 -----------NVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRT--------  225 (270)
Q Consensus       165 -----------~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~--------  225 (270)
                                 .....|+.+|.+.+.+++.+.++.   ++++..+.|+.+..|....-..............        
T Consensus       143 ~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g  219 (346)
T d1oc2a_         143 PGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEG  219 (346)
T ss_dssp             TTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTS
T ss_pred             cccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCC
Confidence                       112469999999999999888764   7999999999888763321111122222222222        


Q ss_pred             -CCCCCCChHhHHHHHHHHhCCCCCCccCcEEeecCCcc
Q 024230          226 -PMGRLGEPKEVSSLVAFLCMPAASYITGQTVCIDGGFT  263 (270)
Q Consensus       226 -~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgG~~  263 (270)
                       ..+.....+|++++++.+....   ..|..+++-+|-.
T Consensus       220 ~~~r~~i~v~D~a~a~~~~~~~~---~~~~~~~~~~~~~  255 (346)
T d1oc2a_         220 KNVRDWIHTNDHSTGVWAILTKG---RMGETYLIGADGE  255 (346)
T ss_dssp             CCEEECEEHHHHHHHHHHHHHHC---CTTCEEEECCSCE
T ss_pred             CccccccchhhHHHHHHHHHhhc---ccCcccccccccc
Confidence             1223556899999998877533   3455666655544

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.68  E-value=4.1e-15  Score=129.64  Aligned_cols=230  Identities=15%  Similarity=0.081  Sum_probs=155.6

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHH-CCCeEEEeeC---------ChhHHHHHHHHHHhc--------CCeEEEEEccCCCH
Q 024230           20 GMTALVTGGTKGLGLAVVEELSM-LGATVHTCSR---------TETELNECIHHLQMK--------GLKVTGSVCDVSSR   81 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~-~G~~v~l~~r---------~~~~~~~~~~~~~~~--------~~~~~~~~~D~~~~   81 (270)
                      +++||||||+|.||.+++++|++ .|++|+++++         ..+..+.....++..        ...+.++.+|++|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            46899999999999999999986 6899999874         112223333333321        23578899999999


Q ss_pred             HHHHHHHHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccc
Q 024230           82 PQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGI  161 (270)
Q Consensus        82 ~~~~~~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~  161 (270)
                      +.++++++..     .++|+++|+|+......    ..+.....+++|+.++..++.++    .+.+..+++++++...+
T Consensus        82 ~~l~~~~~~~-----~~~d~ViH~Aa~~~~~~----~~~~~~~~~~~N~~~t~~~l~~~----~~~~~~~~~~~~s~~~~  148 (383)
T d1gy8a_          82 DFLNGVFTRH-----GPIDAVVHMCAFLAVGE----SVRDPLKYYDNNVVGILRLLQAM----LLHKCDKIIFSSSAAIF  148 (383)
T ss_dssp             HHHHHHHHHS-----CCCCEEEECCCCCCHHH----HHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGT
T ss_pred             HHhhhhhhcc-----ceeehhhcccccccccc----cccccccccccccccccccchhh----hccCCcccccccccccc
Confidence            9988888653     57899999999754321    23345567889999999998888    45555677777776654


Q ss_pred             ccC------------------CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC-----h---
Q 024230          162 VSA------------------NVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN-----G---  215 (270)
Q Consensus       162 ~~~------------------~~~~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~-----~---  215 (270)
                      ...                  .....|+.+|.+.+.+++.+...   .|+.+..+.|+.+..+........     .   
T Consensus       149 ~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~i  225 (383)
T d1gy8a_         149 GNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEA---YGIKGICLRYFNACGAHEDGDIGEHYQGSTHLI  225 (383)
T ss_dssp             BSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECEEECCCTTSSCSCCSTTCCSHH
T ss_pred             cccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHH---hCCCEEEEecceeeccCccccccccccccchhH
Confidence            321                  12467999999999999988765   478999999988776654322110     0   


Q ss_pred             -hhHHHHhh----------------c---------------CCCCCCCChHhHHHHHHHHhC------CCCCCccCcEEe
Q 024230          216 -KFVDEVKS----------------R---------------TPMGRLGEPKEVSSLVAFLCM------PAASYITGQTVC  257 (270)
Q Consensus       216 -~~~~~~~~----------------~---------------~~~~~~~~~~dva~~~~~l~s------~~~~~~~G~~i~  257 (270)
                       .....+..                .               ...+.+...+|+++++..+..      .......+++++
T Consensus       226 p~ii~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~N  305 (383)
T d1gy8a_         226 PIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFN  305 (383)
T ss_dssp             HHHHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEE
T ss_pred             HHHHHHHHhhccccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEE
Confidence             01111100                0               001123458999999877653      123456778999


Q ss_pred             ecCCcccc
Q 024230          258 IDGGFTVN  265 (270)
Q Consensus       258 vdgG~~~~  265 (270)
                      +.+|..+.
T Consensus       306 i~s~~~~s  313 (383)
T d1gy8a_         306 LGTSRGYS  313 (383)
T ss_dssp             ESCSCCEE
T ss_pred             eCCCCcee
Confidence            98886544

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.63  E-value=1.9e-15  Score=130.17  Aligned_cols=214  Identities=16%  Similarity=0.092  Sum_probs=145.8

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      ++||+||||||+|.||..++++|+++|++|+.++|+..+.....+..+ ....+.++.+|++|.+.+.++++.      .
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~~i~~~~~Dl~d~~~l~~~~~~------~   78 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR-VADGMQSEIGDIRDQNKLLESIRE------F   78 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT-TTTTSEEEECCTTCHHHHHHHHHH------H
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhh-cccCCeEEEeeccChHhhhhhhhh------c
Confidence            689999999999999999999999999999999998765444333222 224688899999999888887765      3


Q ss_pred             cccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC------------C
Q 024230           98 KLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA------------N  165 (270)
Q Consensus        98 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~------------~  165 (270)
                      .+|+++|+|+.....    .+.+.....+.+|+.++.++++++..   ......+++.|+.......            .
T Consensus        79 ~~~~v~~~aa~~~~~----~~~~~~~~~~~~Nv~g~~n~l~~~~~---~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~  151 (356)
T d1rkxa_          79 QPEIVFHMAAQPLVR----LSYSEPVETYSTNVMGTVYLLEAIRH---VGGVKAVVNITSDKCYDNKEWIWGYRENEAMG  151 (356)
T ss_dssp             CCSEEEECCSCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHH---HCCCCEEEEECCGGGBCCCCSSSCBCTTSCBC
T ss_pred             hhhhhhhhhcccccc----ccccCCccccccccccchhhhhhhhc---cccccccccccccccccccccccccccccccC
Confidence            789999999864321    23445677899999999999988843   1223344444444332211            1


Q ss_pred             CChhhhhhHHHHHHHHHHHHHHHc------cCCceEEEEecCcccCCCCccccCC-hhhHHHHhhcCC--------CCCC
Q 024230          166 VGTVYSATKGAMNQLAKNLACEWA------KDNIRTNSVAPWYIRTPFTEPLLGN-GKFVDEVKSRTP--------MGRL  230 (270)
Q Consensus       166 ~~~~y~~sKaal~~~~~sla~el~------~~~i~v~~v~pG~v~t~~~~~~~~~-~~~~~~~~~~~~--------~~~~  230 (270)
                      ....|+.+|.+.+.+.+.++.++.      ..++.+..+.|+.+..+-....... +..........+        ....
T Consensus       152 p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  231 (356)
T d1rkxa_         152 GYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPW  231 (356)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECC
T ss_pred             CCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEeeccccccc
Confidence            234699999999999999888764      3468888888887776533221110 111222222211        1123


Q ss_pred             CChHhHHHHHHHHhC
Q 024230          231 GEPKEVSSLVAFLCM  245 (270)
Q Consensus       231 ~~~~dva~~~~~l~s  245 (270)
                      ...+|++.++..++.
T Consensus       232 ~~v~D~~~a~~~~~~  246 (356)
T d1rkxa_         232 QHVLEPLSGYLLLAQ  246 (356)
T ss_dssp             EETHHHHHHHHHHHH
T ss_pred             cccccccchhhhhhh
Confidence            457899999877764

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.62  E-value=9.6e-15  Score=118.19  Aligned_cols=215  Identities=12%  Similarity=0.005  Sum_probs=138.1

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCe--EEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGAT--VHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~--v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      ++||||||+|.||++++++|+++|++  |+.+.|++++.+.       ....+.++.+|+++.+++.+++        ..
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~--------~~   68 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK-------IGGEADVFIGDITDADSINPAF--------QG   68 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHH-------TTCCTTEEECCTTSHHHHHHHH--------TT
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHh-------ccCCcEEEEeeecccccccccc--------cc
Confidence            69999999999999999999999975  6667888765432       2346778899999999887776        57


Q ss_pred             ccEEEECCCCCCCCC---------CCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChh
Q 024230           99 LNIFVNNVGTSVLKP---------TLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTV  169 (270)
Q Consensus        99 id~li~~ag~~~~~~---------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~  169 (270)
                      +|.+||+++......         ..............+|+.+...+.....    ....+...+.++.....+......
T Consensus        69 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~s~~~~~~~~~~~~~  144 (252)
T d2q46a1          69 IDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAK----VAGVKHIVVVGSMGGTNPDHPLNK  144 (252)
T ss_dssp             CSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHH----HHTCSEEEEEEETTTTCTTCGGGG
T ss_pred             ceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccc----cccccccccccccccCCCCccccc
Confidence            899999998643111         1111122344566789999888877663    344567888877766555443333


Q ss_pred             hhhhHH-HHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCC
Q 024230          170 YSATKG-AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAA  248 (270)
Q Consensus       170 y~~sKa-al~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  248 (270)
                      +..++. ........+   ....|+++..+.||.+..+.................  ......+.+|+|++++..+..  
T Consensus       145 ~~~~~~~~~~~~~~~~---~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~--~~~~~i~~~Dva~a~~~~l~~--  217 (252)
T d2q46a1         145 LGNGNILVWKRKAEQY---LADSGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQ--TDTKTVPRADVAEVCIQALLF--  217 (252)
T ss_dssp             GGGCCHHHHHHHHHHH---HHHSSSCEEEEEECEEECSCTTSSCEEEESTTGGGG--SSCCEEEHHHHHHHHHHHTTC--
T ss_pred             ccccchhhhhhhhhhh---hhcccccceeecceEEECCCcchhhhhhccCccccc--CCCCeEEHHHHHHHHHHHhCC--
Confidence            333222 222222222   234689999999999877654322111000000110  112345789999999988854  


Q ss_pred             CCccCcEEeecCC
Q 024230          249 SYITGQTVCIDGG  261 (270)
Q Consensus       249 ~~~~G~~i~vdgG  261 (270)
                      +...|+++++.++
T Consensus       218 ~~~~g~~~~i~~~  230 (252)
T d2q46a1         218 EEAKNKAFDLGSK  230 (252)
T ss_dssp             GGGTTEEEEEEEC
T ss_pred             ccccCcEEEEeeC
Confidence            3357899988653

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=4.7e-15  Score=120.71  Aligned_cols=198  Identities=16%  Similarity=0.144  Sum_probs=135.8

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCC--eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      .+.+++|+||||||+|.||++++++|+++|.  +|++++|++.....      .....+....+|+.+.+++.+.+    
T Consensus         9 ~~~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~------~~~~~i~~~~~D~~~~~~~~~~~----   78 (232)
T d2bkaa1           9 DFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE------EAYKNVNQEVVDFEKLDDYASAF----   78 (232)
T ss_dssp             HHHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS------GGGGGCEEEECCGGGGGGGGGGG----
T ss_pred             HhCCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc------cccceeeeeeecccccccccccc----
Confidence            4567899999999999999999999999996  79999997654321      11235666778888776654444    


Q ss_pred             HHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhh
Q 024230           93 SLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSA  172 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~  172 (270)
                          ...|.++||+|...       ......+...+|+.++..+.+.+    .+.+..++|++|+..+....  ...|+.
T Consensus        79 ----~~~d~vi~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~a----~~~~v~~fi~~Ss~~~~~~~--~~~Y~~  141 (232)
T d2bkaa1          79 ----QGHDVGFCCLGTTR-------GKAGAEGFVRVDRDYVLKSAELA----KAGGCKHFNLLSSKGADKSS--NFLYLQ  141 (232)
T ss_dssp             ----SSCSEEEECCCCCH-------HHHHHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEECCTTCCTTC--SSHHHH
T ss_pred             ----cccccccccccccc-------cccchhhhhhhcccccceeeecc----cccCccccccCCccccccCc--cchhHH
Confidence                56899999998632       23345667889999999988877    55666789999998776543  356999


Q ss_pred             hHHHHHHHHHHHHHHHccCCc-eEEEEecCcccCCCCccccCChhhHHHHhhcCCC----CCCCChHhHHHHHHHHhCCC
Q 024230          173 TKGAMNQLAKNLACEWAKDNI-RTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRTPM----GRLGEPKEVSSLVAFLCMPA  247 (270)
Q Consensus       173 sKaal~~~~~sla~el~~~~i-~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~dva~~~~~l~s~~  247 (270)
                      +|...+...+.       .+. ++..+.||.+..+..... ........+....+.    ....+++|+|++++..+...
T Consensus       142 ~K~~~E~~l~~-------~~~~~~~IlRP~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~~~~~~  213 (232)
T d2bkaa1         142 VKGEVEAKVEE-------LKFDRYSVFRPGVLLCDRQESR-PGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRP  213 (232)
T ss_dssp             HHHHHHHHHHT-------TCCSEEEEEECCEEECTTGGGS-HHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSC
T ss_pred             HHHHhhhcccc-------ccccceEEecCceeecCCCcCc-HHHHHHHHHhhccCCcccCCCeEEHHHHHHHHHHHHhcC
Confidence            99888765533       244 477789999987643221 011111112111111    12345799999988887543

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.41  E-value=6.1e-14  Score=112.18  Aligned_cols=185  Identities=15%  Similarity=0.131  Sum_probs=120.3

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCC--eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      .|+||||||+|.||++++++|.++|+  +|+.++|++...          ..+   +..+..|..++       .+....
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~----------~~~---~~~~~~d~~~~-------~~~~~~   61 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE----------HPR---LDNPVGPLAEL-------LPQLDG   61 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC----------CTT---EECCBSCHHHH-------GGGCCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh----------ccc---ccccccchhhh-------hhcccc
Confidence            58999999999999999999999998  577777754321          112   23444443332       222336


Q ss_pred             cccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhHHHH
Q 024230           98 KLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAM  177 (270)
Q Consensus        98 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sKaal  177 (270)
                      .+|.+|+|+|.....      ...-+...++|+.++..+++++    ++.+..+++++||..+...  ....|..+|...
T Consensus        62 ~~d~vi~~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~a----~~~~v~~~i~~Ss~~~~~~--~~~~y~~~K~~~  129 (212)
T d2a35a1          62 SIDTAFCCLGTTIKE------AGSEEAFRAVDFDLPLAVGKRA----LEMGARHYLVVSALGADAK--SSIFYNRVKGEL  129 (212)
T ss_dssp             CCSEEEECCCCCHHH------HSSHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEECCTTCCTT--CSSHHHHHHHHH
T ss_pred             chheeeeeeeeeccc------cccccccccchhhhhhhccccc----ccccccccccccccccccc--cccchhHHHHHH
Confidence            799999999864211      1112456889999999998877    5666678999998876543  345799999887


Q ss_pred             HHHHHHHHHHHccCCc-eEEEEecCcccCCCCccccCChhhHHHHhhcC---CCC--CCCChHhHHHHHHHHhCCCC
Q 024230          178 NQLAKNLACEWAKDNI-RTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRT---PMG--RLGEPKEVSSLVAFLCMPAA  248 (270)
Q Consensus       178 ~~~~~sla~el~~~~i-~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~dva~~~~~l~s~~~  248 (270)
                      +.+.+       ..+. +...+.|+.+..+......     ...+....   ..+  +....+|+|+++++++..+.
T Consensus       130 E~~l~-------~~~~~~~~I~Rp~~v~G~~~~~~~-----~~~~~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~~  194 (212)
T d2a35a1         130 EQALQ-------EQGWPQLTIARPSLLFGPREEFRL-----AEILAAPIARILPGKYHGIEACDLARALWRLALEEG  194 (212)
T ss_dssp             HHHHT-------TSCCSEEEEEECCSEESTTSCEEG-----GGGTTCCCC----CHHHHHHHHHHHHHHHHHHTCCC
T ss_pred             hhhcc-------ccccccceeeCCcceeCCcccccH-----HHHHHHHHhhccCCCCcEEEHHHHHHHHHHHHcCCC
Confidence            76553       2344 5778899988765432110     00000000   001  12457999999999996653

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.37  E-value=3.7e-12  Score=105.36  Aligned_cols=196  Identities=17%  Similarity=0.142  Sum_probs=130.9

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      ++||||||+|.||++++++|.++|++|+.++|++                     +|++|.++++++++.      .++|
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~---------------------~D~~d~~~~~~~l~~------~~~d   54 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD---------------------LDITNVLAVNKFFNE------KKPN   54 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---------------------CCTTCHHHHHHHHHH------HCCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh---------------------ccCCCHHHHHHHHHH------cCCC
Confidence            3599999999999999999999999999998853                     589999998887765      2689


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccccc-----------CCCChh
Q 024230          101 IFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVS-----------ANVGTV  169 (270)
Q Consensus       101 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~-----------~~~~~~  169 (270)
                      ++||+++.....    .........+..|+.....+.....    .. ...+++.||...+..           ......
T Consensus        55 ~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~~~~~----~~-~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~  125 (281)
T d1vl0a_          55 VVINCAAHTAVD----KCEEQYDLAYKINAIGPKNLAAAAY----SV-GAEIVQISTDYVFDGEAKEPITEFDEVNPQSA  125 (281)
T ss_dssp             EEEECCCCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHH----HH-TCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSH
T ss_pred             EEEeeccccccc----cccccchhhcccccccccccccccc----cc-cccccccccceeeeccccccccccccccchhh
Confidence            999999874321    1223345667788887777766653    22 235666665543322           123456


Q ss_pred             hhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChhhHHHHhhcC-------CCCCCCChHhHHHHHHH
Q 024230          170 YSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGKFVDEVKSRT-------PMGRLGEPKEVSSLVAF  242 (270)
Q Consensus       170 y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~dva~~~~~  242 (270)
                      |+.+|...+.+.+.       .+.+...+.|+.+..+-...   ............       ........+|+++++.+
T Consensus       126 ~~~~k~~~e~~~~~-------~~~~~~i~R~~~vyG~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~  195 (281)
T d1vl0a_         126 YGKTKLEGENFVKA-------LNPKYYIVRTAWLYGDGNNF---VKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLK  195 (281)
T ss_dssp             HHHHHHHHHHHHHH-------HCSSEEEEEECSEESSSSCH---HHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHH
T ss_pred             hhhhhhHHHHHHHH-------hCCCccccceeEEeCCCccc---ccchhhhhccCCceeecCCceeccchhhhhhhhhhh
Confidence            88888887766644       25677889999887653211   112222222221       12245579999999999


Q ss_pred             HhCCCCCCccCcEEeecCCccccc
Q 024230          243 LCMPAASYITGQTVCIDGGFTVNG  266 (270)
Q Consensus       243 l~s~~~~~~~G~~i~vdgG~~~~~  266 (270)
                      ++...   .+| .+++.+|..++.
T Consensus       196 ~~~~~---~~g-~~~~~~~~~~s~  215 (281)
T d1vl0a_         196 VIDEK---NYG-TFHCTCKGICSW  215 (281)
T ss_dssp             HHHHT---CCE-EEECCCBSCEEH
T ss_pred             hhhhc---ccC-ceeEeCCCccch
Confidence            98543   244 677777666554

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.33  E-value=1.6e-11  Score=102.69  Aligned_cols=206  Identities=13%  Similarity=0.060  Sum_probs=118.7

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHH----HHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETEL----NECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      ++||||||+|.||++++++|+++|++|++++|++...    .+....+.  ...+.++.+|+++.+.+.+.+        
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~--~~~v~~v~~d~~d~~~~~~~~--------   73 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFK--QLGAKLIEASLDDHQRLVDAL--------   73 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHH--TTTCEEECCCSSCHHHHHHHH--------
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhc--cCCcEEEEeecccchhhhhhc--------
Confidence            5699999999999999999999999999999975421    12222222  345778899999998877766        


Q ss_pred             CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCC-----CChhhh
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSAN-----VGTVYS  171 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~-----~~~~y~  171 (270)
                      ...+.++++++.....               .|..+...++.++    .+....++++.||........     ....|.
T Consensus        74 ~~~~~~~~~~~~~~~~---------------~~~~~~~~~l~~a----~~~~~~~~v~~Ss~g~~~~~~~~~~~~~~~~~  134 (312)
T d1qyda_          74 KQVDVVISALAGGVLS---------------HHILEQLKLVEAI----KEAGNIKRFLPSEFGMDPDIMEHALQPGSITF  134 (312)
T ss_dssp             TTCSEEEECCCCSSSS---------------TTTTTHHHHHHHH----HHSCCCSEEECSCCSSCTTSCCCCCSSTTHHH
T ss_pred             cCcchhhhhhhhcccc---------------cchhhhhHHHHHH----HHhcCCcEEEEeeccccCCCcccccchhhhhh
Confidence            5678888887653221               2333333444444    444456677777654432221     122344


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccC-------ChhhHHHHhhcCCCCCCCChHhHHHHHHHHh
Q 024230          172 ATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLG-------NGKFVDEVKSRTPMGRLGEPKEVSSLVAFLC  244 (270)
Q Consensus       172 ~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  244 (270)
                      .+|.+++.    +.   ...++.+..+.|+.+..+.......       ......-+........+...+|++++++.++
T Consensus       135 ~~~~~~~~----~~---~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l  207 (312)
T d1qyda_         135 IDKRKVRR----AI---EAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSI  207 (312)
T ss_dssp             HHHHHHHH----HH---HHTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHT
T ss_pred             HHHHHHHH----hh---cccccceEEeccceeecCCccchhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHh
Confidence            44444332    22   2347778888887765432211110       0000000000011122457899999998888


Q ss_pred             CCCCCCccCcEEeecCCcc
Q 024230          245 MPAASYITGQTVCIDGGFT  263 (270)
Q Consensus       245 s~~~~~~~G~~i~vdgG~~  263 (270)
                      .. ....++..+.+.++..
T Consensus       208 ~~-~~~~~~~~~~~~~~~~  225 (312)
T d1qyda_         208 DD-PQTLNKTMYIRPPMNI  225 (312)
T ss_dssp             TC-GGGSSSEEECCCGGGE
T ss_pred             cC-ccccCceEEEeCCCcC
Confidence            54 2333444455555543

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.29  E-value=1.6e-11  Score=105.15  Aligned_cols=205  Identities=14%  Similarity=0.069  Sum_probs=123.9

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHH-HHHHHHHHHHHcCC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQ-RQTLINTVSSLFNG   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~i~~~~~~   97 (270)
                      +.|+|+||||+|.||.+++++|+++|++|+++.|+..+...  ..+.. ...+..+..|+.|..+ ++.++        .
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~~-~~~v~~~~gD~~d~~~~~~~a~--------~   70 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQA-IPNVTLFQGPLLNNVPLMDTLF--------E   70 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHT-STTEEEEESCCTTCHHHHHHHH--------T
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhcc-cCCCEEEEeeCCCcHHHHHHHh--------c
Confidence            46999999999999999999999999999999998775432  22222 2357888999998655 33333        5


Q ss_pred             cccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCC--CChhhhhhHH
Q 024230           98 KLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSAN--VGTVYSATKG  175 (270)
Q Consensus        98 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~--~~~~y~~sKa  175 (270)
                      ..|.++.+......                .++....+++.++    .+.+..++++.||.......+  ....|..+|.
T Consensus        71 ~~~~~~~~~~~~~~----------------~~~~~~~~~~~aa----~~agv~~~v~~Ss~~~~~~~~~~~~~~~~~~k~  130 (350)
T d1xgka_          71 GAHLAFINTTSQAG----------------DEIAIGKDLADAA----KRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKF  130 (350)
T ss_dssp             TCSEEEECCCSTTS----------------CHHHHHHHHHHHH----HHHSCCSEEEEEECCCGGGTSSCCCCTTTHHHH
T ss_pred             CCceEEeecccccc----------------hhhhhhhHHHHHH----HHhCCCceEEEeeccccccCCcccchhhhhhHH
Confidence            67777766543211                1233334455554    344445677777765544332  2345667777


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCChh--hHH--HHhhcCCCC---C--CCC-hHhHHHHHHHHhC
Q 024230          176 AMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGNGK--FVD--EVKSRTPMG---R--LGE-PKEVSSLVAFLCM  245 (270)
Q Consensus       176 al~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~~~--~~~--~~~~~~~~~---~--~~~-~~dva~~~~~l~s  245 (270)
                      ..+.+.++       .++....+.|+.+..++.........  ...  ......+..   .  ... .+|+++++..++.
T Consensus       131 ~~~~~~~~-------~~~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~  203 (350)
T d1xgka_         131 TVENYVRQ-------LGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFK  203 (350)
T ss_dssp             HHHHHHHT-------SSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHH
T ss_pred             HHHHHHHh-------hccCceeeeeceeeccccccccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHh
Confidence            66655433       35778888888766543322211100  000  000001110   0  122 4799999988886


Q ss_pred             CCCCCccCcEEeecCC
Q 024230          246 PAASYITGQTVCIDGG  261 (270)
Q Consensus       246 ~~~~~~~G~~i~vdgG  261 (270)
                      +......|+.+.+.|.
T Consensus       204 ~~~~~~~G~~~~~~g~  219 (350)
T d1xgka_         204 DGPQKWNGHRIALTFE  219 (350)
T ss_dssp             HCHHHHTTCEEEECSE
T ss_pred             CChhhcCCeEEEEeCC
Confidence            5445568999988764

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.28  E-value=7.2e-12  Score=104.15  Aligned_cols=209  Identities=11%  Similarity=0.045  Sum_probs=118.8

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHH-----HHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETEL-----NECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~-----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      -|+||||||+|.||++++++|+++|++|++++|+....     ......+.  ...+.++.+|+.+.+.....+      
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~------   74 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK--ASGANIVHGSIDDHASLVEAV------   74 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH--TTTCEEECCCTTCHHHHHHHH------
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhc--cCCcEEEEeecccchhhhhhh------
Confidence            47899999999999999999999999999999975432     11122222  234677889999988766665      


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                        ...+.++++++...                   ..+...+.+++    ...+...+++.||............+...+
T Consensus        75 --~~~~~vi~~~~~~~-------------------~~~~~~~~~a~----~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~  129 (307)
T d1qyca_          75 --KNVDVVISTVGSLQ-------------------IESQVNIIKAI----KEVGTVKRFFPSEFGNDVDNVHAVEPAKSV  129 (307)
T ss_dssp             --HTCSEEEECCCGGG-------------------SGGGHHHHHHH----HHHCCCSEEECSCCSSCTTSCCCCTTHHHH
T ss_pred             --hhceeeeecccccc-------------------cchhhHHHHHH----HHhccccceeeecccccccccccccccccc
Confidence              35688888886532                   12222333333    333445666666654443333333333333


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC------hhhHHHHhhcCCCCCCCChHhHHHHHHHHhCCCC
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN------GKFVDEVKSRTPMGRLGEPKEVSSLVAFLCMPAA  248 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  248 (270)
                      ...........   ...++....+.|+.+..+....+...      ......+........+...+|++++++.++... 
T Consensus       130 ~~~~~~~~~~~---~~~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~-  205 (307)
T d1qyca_         130 FEVKAKVRRAI---EAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDP-  205 (307)
T ss_dssp             HHHHHHHHHHH---HHHTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCG-
T ss_pred             ccccccccchh---hccCCCceecccceecCCCccchhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcCh-
Confidence            33222222222   23477888888887764322211110      000000111111223557999999999888543 


Q ss_pred             CCccCcEEeecCCcccc
Q 024230          249 SYITGQTVCIDGGFTVN  265 (270)
Q Consensus       249 ~~~~G~~i~vdgG~~~~  265 (270)
                      ...++..+.+.+|..++
T Consensus       206 ~~~~~~~~~~~~~~~~s  222 (307)
T d1qyca_         206 RTLNKTLYLRLPANTLS  222 (307)
T ss_dssp             GGTTEEEECCCGGGEEE
T ss_pred             hhcCceeEEeCCCCccC
Confidence            23344444555555544

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.22  E-value=2.3e-11  Score=101.11  Aligned_cols=130  Identities=19%  Similarity=0.191  Sum_probs=92.8

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      ++||||||+|.||+++++.|.++|+.|.+..++ ..                 +..|++|.+.++++++..      ++|
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~~v~~~~~~-~~-----------------~~~Dl~~~~~~~~~i~~~------~~D   56 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHS-KE-----------------FCGDFSNPKGVAETVRKL------RPD   56 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSEEEEECTTC-SS-----------------SCCCTTCHHHHHHHHHHH------CCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEECCC-cc-----------------ccCcCCCHHHHHHHHHHc------CCC
Confidence            369999999999999999999999765554333 21                 246999999988887653      689


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCC-----------CChh
Q 024230          101 IFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSAN-----------VGTV  169 (270)
Q Consensus       101 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~-----------~~~~  169 (270)
                      ++||+||....... ...   -...+..|+.+...+..++    .+. +.+++++||...+....           ....
T Consensus        57 ~Vih~Aa~~~~~~~-~~~---~~~~~~~n~~~~~~l~~~~----~~~-~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~  127 (298)
T d1n2sa_          57 VIVNAAAHTAVDKA-ESE---PELAQLLNATSVEAIAKAA----NET-GAWVVHYSTDYVFPGTGDIPWQETDATSPLNV  127 (298)
T ss_dssp             EEEECCCCCCHHHH-TTC---HHHHHHHHTHHHHHHHHHH----TTT-TCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSH
T ss_pred             EEEEeccccccccc-ccC---ccccccccccccccchhhh----hcc-ccccccccccccccCCCCCCCccccccCCCch
Confidence            99999997543211 122   3467889999999998887    333 35777777776543221           2357


Q ss_pred             hhhhHHHHHHHHHH
Q 024230          170 YSATKGAMNQLAKN  183 (270)
Q Consensus       170 y~~sKaal~~~~~s  183 (270)
                      |+.+|.+.+.+.+.
T Consensus       128 y~~~k~~~e~~~~~  141 (298)
T d1n2sa_         128 YGKTKLAGEKALQD  141 (298)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HhhhhhhhhhhHHh
Confidence            99999888776644

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.14  E-value=1.7e-15  Score=119.55  Aligned_cols=169  Identities=12%  Similarity=0.082  Sum_probs=93.2

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCC-------------CHHHHHHHH
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVS-------------SRPQRQTLI   88 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-------------~~~~~~~~~   88 (270)
                      +|.|+||+|++|+++|+.|+++|++|++++|++++++++.+++...+........|..             .........
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLTIPWEHAIDTA   81 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHHCSEEEECSCHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEeeccccccchhhhhhhheeeeccchHH
Confidence            5788899999999999999999999999999999999988888754322211111111             111111111


Q ss_pred             HHHHHHcCCcccEEEEC-CCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCC
Q 024230           89 NTVSSLFNGKLNIFVNN-VGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG  167 (270)
Q Consensus        89 ~~i~~~~~~~id~li~~-ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~  167 (270)
                      .......  ........ ........             ..+..+...+.+...+.+........+++.+..........
T Consensus        82 ~~~~~~~--~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (212)
T d1jaya_          82 RDLKNIL--REKIVVSPLVPVSRGAK-------------GFTYSSERSAAEIVAEVLESEKVVSALHTIPAARFANLDEK  146 (212)
T ss_dssp             HHTHHHH--TTSEEEECCCCEECCTT-------------CCEECCSSCHHHHHHHHHTCSCEEECCTTCCHHHHHCTTCC
T ss_pred             HHhhhhh--ccccccccccccccccc-------------cccccccchhhhhhhhhhhhhcccccceeecHHHhcCcccc
Confidence            1111111  11111111 11110000             00000001111222333333333333334444434444555


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccC
Q 024230          168 TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRT  205 (270)
Q Consensus       168 ~~y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t  205 (270)
                      ..|..++++....++..+.++....+.++.+.||.+.+
T Consensus       147 ~~~~~~~a~~~~~a~~~~~~~~~~~~g~~~~~~G~l~~  184 (212)
T d1jaya_         147 FDWDVPVCGDDDESKKVVMSLISEIDGLRPLDAGPLSN  184 (212)
T ss_dssp             CCEEEEEEESCHHHHHHHHHHHHHSTTEEEEEEESGGG
T ss_pred             cCccceEEeCCHHHHHHHHHHHhhCCCeEEEEeChHHH
Confidence            66777777778888888888877788889999998775

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.13  E-value=8.6e-10  Score=91.61  Aligned_cols=213  Identities=13%  Similarity=0.119  Sum_probs=125.3

Q ss_pred             EEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc-CCccc
Q 024230           23 ALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF-NGKLN  100 (270)
Q Consensus        23 vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~-~~~id  100 (270)
                      ||||||+|.||.+++++|+++|+ +|+.+++-.... +... +...      ..+|..+.+.   ..+.+.... ...++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~-~~~~-~~~~------~~~~~~~~~~---~~~~~~~~~~~~~~~   70 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGT-KFVN-LVDL------NIADYMDKED---FLIQIMAGEEFGDVE   70 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGG-GGHH-HHTS------CCSEEEEHHH---HHHHHHTTCCCSSCC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcc-hhhc-cccc------chhhhccchH---HHHHHhhhhcccchh
Confidence            89999999999999999999996 688876432221 1111 1111      1122333333   333333221 15688


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccC-----------CCChh
Q 024230          101 IFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSA-----------NVGTV  169 (270)
Q Consensus       101 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~-----------~~~~~  169 (270)
                      .++|.|+.....   ..+   .+.....|+.+...+++++.    ..+. ++++.||...+.+.           +....
T Consensus        71 ~i~~~aa~~~~~---~~~---~~~~~~~~~~~~~~~l~~~~----~~~i-~~v~~ss~~~~~~~~~~~~~~~~~~~~~~~  139 (307)
T d1eq2a_          71 AIFHEGACSSTT---EWD---GKYMMDNNYQYSKELLHYCL----EREI-PFLYASSAATYGGRTSDFIESREYEKPLNV  139 (307)
T ss_dssp             EEEECCSCCCTT---CCC---HHHHHHHTHHHHHHHHHHHH----HHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSH
T ss_pred             hhhhhccccccc---ccc---cccccccccccccccccccc----cccc-cccccccccccccccccccccccccccccc
Confidence            999998764322   122   34457788888888877764    3333 35555555443322           23467


Q ss_pred             hhhhHHHHHHHHHHHHHHHccCCceEEEEecCcccCCCCccccCC----hhhHHHHhhc----------CCCCCCCChHh
Q 024230          170 YSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTEPLLGN----GKFVDEVKSR----------TPMGRLGEPKE  235 (270)
Q Consensus       170 y~~sKaal~~~~~sla~el~~~~i~v~~v~pG~v~t~~~~~~~~~----~~~~~~~~~~----------~~~~~~~~~~d  235 (270)
                      |+.+|.+.+.+++.++.+   .++.+..+.|..+..+....-...    ......+...          .........+|
T Consensus       140 Y~~~K~~~e~~~~~~~~~---~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d  216 (307)
T d1eq2a_         140 YGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGD  216 (307)
T ss_dssp             HHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHH
T ss_pred             cccccchhhhhccccccc---cccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeeccc
Confidence            999999999999887644   578888888887777643221111    1111222111          11223456899


Q ss_pred             HHHHHHHHhCCCCCCccCcEEeecCCccc
Q 024230          236 VSSLVAFLCMPAASYITGQTVCIDGGFTV  264 (270)
Q Consensus       236 va~~~~~l~s~~~~~~~G~~i~vdgG~~~  264 (270)
                      ++.++..+....    ....+++.+|...
T Consensus       217 ~~~~~~~~~~~~----~~~~~~~~~~~~~  241 (307)
T d1eq2a_         217 VADVNLWFLENG----VSGIFNLGTGRAE  241 (307)
T ss_dssp             HHHHHHHHHHHC----CCEEEEESCSCCB
T ss_pred             HHHHHHHHhhhc----cccccccccccch
Confidence            999998877543    2346777766544

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.24  E-value=3.9e-06  Score=64.35  Aligned_cols=87  Identities=14%  Similarity=0.248  Sum_probs=66.1

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMK--GLKVTGSVCDVSSRPQRQTLINT   90 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~   90 (270)
                      .+.++++|+|+|.|+ ||.|++++..|++.|. ++++++|+.+..++....++..  .........|+.+.+++....  
T Consensus        12 ~~~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--   88 (182)
T d1vi2a1          12 SGFDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEAL--   88 (182)
T ss_dssp             TTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHH--
T ss_pred             cCCCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhh--
Confidence            356899999999999 6999999999999998 5999999887666554433322  122445578888887766554  


Q ss_pred             HHHHcCCcccEEEECCCCC
Q 024230           91 VSSLFNGKLNIFVNNVGTS  109 (270)
Q Consensus        91 i~~~~~~~id~li~~ag~~  109 (270)
                            ...|++||+....
T Consensus        89 ------~~~diiIN~Tp~G  101 (182)
T d1vi2a1          89 ------ASADILTNGTKVG  101 (182)
T ss_dssp             ------HTCSEEEECSSTT
T ss_pred             ------cccceeccccCCc
Confidence                  4689999998754

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.16  E-value=5.5e-06  Score=63.41  Aligned_cols=79  Identities=16%  Similarity=0.254  Sum_probs=56.0

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      +|.+|||+|++|++|...+......|++|+.+++++++.+.    +.+.|....+   |-.+++..+...+.   ..++.
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~----~~~~Ga~~vi---~~~~~~~~~~~~~~---~~~~G   98 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAY----LKQIGFDAAF---NYKTVNSLEEALKK---ASPDG   98 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH----HHHTTCSEEE---ETTSCSCHHHHHHH---HCTTC
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHH----HHhhhhhhhc---ccccccHHHHHHHH---hhcCC
Confidence            58999999999999999999999999999999998876543    3344544443   23332222222222   12256


Q ss_pred             ccEEEECCC
Q 024230           99 LNIFVNNVG  107 (270)
Q Consensus        99 id~li~~ag  107 (270)
                      +|+++++.|
T Consensus        99 vd~v~D~vG  107 (182)
T d1v3va2          99 YDCYFDNVG  107 (182)
T ss_dssp             EEEEEESSC
T ss_pred             CceeEEecC
Confidence            999999997

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.14  E-value=6.7e-06  Score=62.17  Aligned_cols=74  Identities=15%  Similarity=0.144  Sum_probs=55.9

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      .|+|+|.|+ |.+|..+|+.|+++|++|++++|+.++.+++.+.+    ........+..+.......+        ...
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~----~~~~~~~~~~~~~~~~~~~i--------~~~   68 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV----QHSTPISLDVNDDAALDAEV--------AKH   68 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTC----TTEEEEECCTTCHHHHHHHH--------TTS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcc----cccccccccccchhhhHhhh--------hcc
Confidence            699999987 99999999999999999999999999887765433    33445556666655555554        456


Q ss_pred             cEEEECC
Q 024230          100 NIFVNNV  106 (270)
Q Consensus       100 d~li~~a  106 (270)
                      |.++.+.
T Consensus        69 ~~~i~~~   75 (182)
T d1e5qa1          69 DLVISLI   75 (182)
T ss_dssp             SEEEECS
T ss_pred             ceeEeec
Confidence            6766554

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=98.13  E-value=9.8e-06  Score=60.64  Aligned_cols=74  Identities=23%  Similarity=0.272  Sum_probs=57.5

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      ++++|+++|.|+ |++|+.+++.|..+|+ ++.++.|+.++.+++.+++   +..+    .+   .+++.+.+       
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~---~~~~----~~---~~~~~~~l-------   82 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL---GGEA----VR---FDELVDHL-------   82 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH---TCEE----CC---GGGHHHHH-------
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhh---hccc----cc---chhHHHHh-------
Confidence            789999999998 9999999999999998 5999999998888777765   2222    12   23333333       


Q ss_pred             CCcccEEEECCCCC
Q 024230           96 NGKLNIFVNNVGTS  109 (270)
Q Consensus        96 ~~~id~li~~ag~~  109 (270)
                       ...|++|++.+..
T Consensus        83 -~~~Divi~atss~   95 (159)
T d1gpja2          83 -ARSDVVVSATAAP   95 (159)
T ss_dssp             -HTCSEEEECCSSS
T ss_pred             -ccCCEEEEecCCC
Confidence             4789999998853

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=98.07  E-value=8.5e-06  Score=61.66  Aligned_cols=80  Identities=16%  Similarity=0.245  Sum_probs=60.8

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      .+.+++||+|+|.|+ ||.+++++..|.+.|.+|.++.|+.++.+++.+.+...+ .+..+  +..+.            
T Consensus        12 ~~~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~-~~~~~--~~~~~------------   75 (170)
T d1nyta1          12 LSFIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG-SIQAL--SMDEL------------   75 (170)
T ss_dssp             HTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS-SEEEC--CSGGG------------
T ss_pred             cCCCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcc-ccccc--ccccc------------
Confidence            357889999999997 888999999999999999999999999988887776543 23222  22111            


Q ss_pred             HcCCcccEEEECCCCCC
Q 024230           94 LFNGKLNIFVNNVGTSV  110 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~  110 (270)
                      .. .+.|++||+.....
T Consensus        76 ~~-~~~dliIN~Tp~G~   91 (170)
T d1nyta1          76 EG-HEFDLIINATSSGI   91 (170)
T ss_dssp             TT-CCCSEEEECCSCGG
T ss_pred             cc-cccceeecccccCc
Confidence            01 46899999976543

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.05  E-value=1.3e-05  Score=60.82  Aligned_cols=78  Identities=18%  Similarity=0.294  Sum_probs=56.1

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC-C
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN-G   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~-~   97 (270)
                      +|.+|||+|++|++|...++.....|++|+.+++++++.+.    +++.|....   .|.++++    +.+++.+..+ .
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~----~~~~Ga~~v---i~~~~~~----~~~~i~~~t~~~   96 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKI----VLQNGAHEV---FNHREVN----YIDKIKKYVGEK   96 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH----HHHTTCSEE---EETTSTT----HHHHHHHHHCTT
T ss_pred             CCCEEEEEeccccccccccccccccCccccccccccccccc----ccccCcccc---ccccccc----HHHHhhhhhccC
Confidence            68999999999999999999999999999999988776543    234454332   3555543    3333433332 4


Q ss_pred             cccEEEECCC
Q 024230           98 KLNIFVNNVG  107 (270)
Q Consensus        98 ~id~li~~ag  107 (270)
                      .+|+++.+.|
T Consensus        97 g~d~v~d~~g  106 (174)
T d1yb5a2          97 GIDIIIEMLA  106 (174)
T ss_dssp             CEEEEEESCH
T ss_pred             CceEEeeccc
Confidence            6999999876

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=98.04  E-value=1.5e-05  Score=59.97  Aligned_cols=83  Identities=27%  Similarity=0.338  Sum_probs=60.0

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      .|.+|+|+| +|++|...+..+...|++|+++++++++++...    +.+....+ ..|-. .++.....+++.+..++.
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~----~~ga~~~~-~~~~~-~~~~~~~~~~~~~~~g~g   98 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK----NCGADVTL-VVDPA-KEEESSIIERIRSAIGDL   98 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH----HTTCSEEE-ECCTT-TSCHHHHHHHHHHHSSSC
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHH----HcCCcEEE-ecccc-ccccchhhhhhhcccccC
Confidence            578999997 689999999999999999999999998875432    33443322 22222 233455566666666567


Q ss_pred             ccEEEECCCC
Q 024230           99 LNIFVNNVGT  108 (270)
Q Consensus        99 id~li~~ag~  108 (270)
                      +|++|.++|.
T Consensus        99 ~D~vid~~g~  108 (170)
T d1e3ja2          99 PNVTIDCSGN  108 (170)
T ss_dssp             CSEEEECSCC
T ss_pred             CceeeecCCC
Confidence            9999999985

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.96  E-value=5e-05  Score=57.34  Aligned_cols=80  Identities=16%  Similarity=0.244  Sum_probs=61.1

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      +.+++||+|+|.|+ ||.+++++..|.+.+.+|.++.|+.++.+.+.+.+.... .+..+..|...              
T Consensus        13 ~~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~-~~~~~~~~~~~--------------   76 (171)
T d1p77a1          13 NWLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG-NIQAVSMDSIP--------------   76 (171)
T ss_dssp             TCCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS-CEEEEEGGGCC--------------
T ss_pred             CCCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhcc-ccchhhhcccc--------------
Confidence            56899999999987 777999999999988899999999999988888776543 45555444221              


Q ss_pred             cCCcccEEEECCCCCCC
Q 024230           95 FNGKLNIFVNNVGTSVL  111 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~  111 (270)
                      . ...|++||+......
T Consensus        77 ~-~~~diiIN~tp~g~~   92 (171)
T d1p77a1          77 L-QTYDLVINATSAGLS   92 (171)
T ss_dssp             C-SCCSEEEECCCC---
T ss_pred             c-cccceeeeccccccc
Confidence            1 578999999876543

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.93  E-value=1.4e-05  Score=60.91  Aligned_cols=78  Identities=22%  Similarity=0.372  Sum_probs=56.6

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC-C
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN-G   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~-~   97 (270)
                      +|++|||+||+|++|..++......|++|+.+.+++++.+    .+++.|....   .|-.++ +   +.+++.+..+ .
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~----~l~~~Ga~~v---i~~~~~-~---~~~~v~~~t~~~   93 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKRE----MLSRLGVEYV---GDSRSV-D---FADEILELTDGY   93 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH----HHHTTCCSEE---EETTCS-T---HHHHHHHHTTTC
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeeccccccc----cccccccccc---ccCCcc-C---HHHHHHHHhCCC
Confidence            4789999999999999999999999999999998877653    2444555432   233443 2   3344444433 4


Q ss_pred             cccEEEECCC
Q 024230           98 KLNIFVNNVG  107 (270)
Q Consensus        98 ~id~li~~ag  107 (270)
                      ++|+++.+.|
T Consensus        94 g~d~v~d~~g  103 (183)
T d1pqwa_          94 GVDVVLNSLA  103 (183)
T ss_dssp             CEEEEEECCC
T ss_pred             CEEEEEeccc
Confidence            6999999997

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.90  E-value=1.6e-05  Score=61.08  Aligned_cols=87  Identities=20%  Similarity=0.222  Sum_probs=61.4

Q ss_pred             CCEEEE-ecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           20 GMTALV-TGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        20 gk~vlI-tG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      |.+++| +||+|++|...++.....|++|+.+.|+.+..++..+.+++.|....+ ..|-.+..++.+.+.++....+++
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi-~~~~~~~~~~~~~v~~~~~~~g~~  107 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVI-TEDQNNSREFGPTIKEWIKQSGGE  107 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEE-EHHHHHCGGGHHHHHHHHHHHTCC
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccEEE-eccccchhHHHHHHHHHHhhccCC
Confidence            455555 699999999999888889999999998888777777777777755443 222222233444455555444468


Q ss_pred             ccEEEECCC
Q 024230           99 LNIFVNNVG  107 (270)
Q Consensus        99 id~li~~ag  107 (270)
                      +|+++++.|
T Consensus       108 vdvv~D~vg  116 (189)
T d1gu7a2         108 AKLALNCVG  116 (189)
T ss_dssp             EEEEEESSC
T ss_pred             ceEEEECCC
Confidence            999999986

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.88  E-value=2.3e-05  Score=56.52  Aligned_cols=74  Identities=11%  Similarity=0.132  Sum_probs=57.9

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      ++|+|.|+ |.+|+.+++.|.++|+.|++++++++..+++.+++     ...++..|.++++.++++-      . ...|
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~-----~~~vi~Gd~~~~~~l~~~~------i-~~a~   67 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI-----DALVINGDCTKIKTLEDAG------I-EDAD   67 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-----SSEEEESCTTSHHHHHHTT------T-TTCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh-----hhhhccCcccchhhhhhcC------h-hhhh
Confidence            36899997 99999999999999999999999998877654432     3556789999987766552      1 4678


Q ss_pred             EEEECCC
Q 024230          101 IFVNNVG  107 (270)
Q Consensus       101 ~li~~ag  107 (270)
                      .++....
T Consensus        68 ~vv~~t~   74 (132)
T d1lssa_          68 MYIAVTG   74 (132)
T ss_dssp             EEEECCS
T ss_pred             hhcccCC
Confidence            8777643

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.86  E-value=6.1e-05  Score=57.01  Aligned_cols=79  Identities=16%  Similarity=0.247  Sum_probs=57.5

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC-C
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN-G   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~-~   97 (270)
                      .|++|+|+||+|++|..+++.....|++|+.+++++++.+.+.    +.|....   .|-++++    +.+++.+..+ .
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~----~lGa~~v---i~~~~~d----~~~~v~~~t~g~   96 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL----KAGAWQV---INYREED----LVERLKEITGGK   96 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----HHTCSEE---EETTTSC----HHHHHHHHTTTC
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH----hcCCeEE---EECCCCC----HHHHHHHHhCCC
Confidence            4899999999999999999999999999999999998875533    2344322   3555533    3333444332 4


Q ss_pred             cccEEEECCCC
Q 024230           98 KLNIFVNNVGT  108 (270)
Q Consensus        98 ~id~li~~ag~  108 (270)
                      .+|+++.+.|.
T Consensus        97 g~d~v~d~~g~  107 (179)
T d1qora2          97 KVRVVYDSVGR  107 (179)
T ss_dssp             CEEEEEECSCG
T ss_pred             CeEEEEeCccH
Confidence            69999999874

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.75  E-value=2.6e-05  Score=50.61  Aligned_cols=43  Identities=30%  Similarity=0.305  Sum_probs=38.1

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHH
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNEC   60 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~   60 (270)
                      -++++++|+|++||+|......+...|++|+.+.+++++.+.+
T Consensus        30 ~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~   72 (77)
T d1o8ca2          30 PQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (77)
T ss_dssp             GGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             cCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence            3688999999999999999999899999999999998876543

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.74  E-value=0.00014  Score=54.66  Aligned_cols=81  Identities=19%  Similarity=0.266  Sum_probs=57.8

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      .|.+|+|.|+ |++|...+..+...|+ +|+++++++++++..    ++.|.... +..+-.+..+   ..+.+....+.
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a----~~~Ga~~~-~~~~~~~~~~---~~~~~~~~~g~   96 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA----KEIGADLV-LQISKESPQE---IARKVEGQLGC   96 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH----HHTTCSEE-EECSSCCHHH---HHHHHHHHHTS
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHH----HHhCCccc-cccccccccc---ccccccccCCC
Confidence            5679999986 9999999999999999 699999998887643    23344432 3333334333   44444555546


Q ss_pred             cccEEEECCCC
Q 024230           98 KLNIFVNNVGT  108 (270)
Q Consensus        98 ~id~li~~ag~  108 (270)
                      .+|++|.+.|.
T Consensus        97 g~Dvvid~~G~  107 (171)
T d1pl8a2          97 KPEVTIECTGA  107 (171)
T ss_dssp             CCSEEEECSCC
T ss_pred             CceEEEeccCC
Confidence            89999999985

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.72  E-value=8.5e-05  Score=56.43  Aligned_cols=81  Identities=19%  Similarity=0.234  Sum_probs=56.1

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC-
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN-   96 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~-   96 (270)
                      .|.+|+|+|+ |++|...+......|+ +|+++++++++++..    ++.|.... +  |..+ ++..+..+++.+... 
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a----~~lGa~~v-i--~~~~-~~~~~~~~~i~~~~~~   98 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA----EEIGADLT-L--NRRE-TSVEERRKAIMDITHG   98 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH----HHTTCSEE-E--ETTT-SCHHHHHHHHHHHTTT
T ss_pred             CCCEEEEECC-Cccchhheeccccccccccccccccccccccc----ccccceEE-E--eccc-cchHHHHHHHHHhhCC
Confidence            6899999986 8999999999999998 799999999887543    33454332 2  3332 222333444444432 


Q ss_pred             CcccEEEECCCC
Q 024230           97 GKLNIFVNNVGT  108 (270)
Q Consensus        97 ~~id~li~~ag~  108 (270)
                      ..+|++|.+.|.
T Consensus        99 ~g~Dvvid~vG~  110 (182)
T d1vj0a2          99 RGADFILEATGD  110 (182)
T ss_dssp             SCEEEEEECSSC
T ss_pred             CCceEEeecCCc
Confidence            359999999986

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.71  E-value=3.6e-05  Score=58.40  Aligned_cols=107  Identities=20%  Similarity=0.185  Sum_probs=68.9

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      .-+|.+|||+||+||+|....+.....|++|+.+.+++++.+..    ++.|....+   |-.+  ...   +.+....+
T Consensus        29 ~~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~----~~lGa~~vi---~~~~--~~~---~~~~~~~~   96 (176)
T d1xa0a2          29 TPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL----RVLGAKEVL---ARED--VMA---ERIRPLDK   96 (176)
T ss_dssp             CGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH----HHTTCSEEE---ECC--------------CCS
T ss_pred             CCCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHH----Hhcccceee---ecch--hHH---HHHHHhhc
Confidence            34588999999999999999999999999999999998876543    334554432   2221  111   11222233


Q ss_pred             CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCcccccc
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVS  163 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~  163 (270)
                      +++|+++.+.|..        ..+                  ..+..++.  +|+++.++...+...
T Consensus        97 ~gvD~vid~vgg~--------~~~------------------~~l~~l~~--~Griv~~G~~~g~~~  135 (176)
T d1xa0a2          97 QRWAAAVDPVGGR--------TLA------------------TVLSRMRY--GGAVAVSGLTGGAEV  135 (176)
T ss_dssp             CCEEEEEECSTTT--------THH------------------HHHHTEEE--EEEEEECSCCSSSCC
T ss_pred             cCcCEEEEcCCch--------hHH------------------HHHHHhCC--CceEEEeecccCccc
Confidence            5899999998852        111                  12333333  589999988766554

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.70  E-value=0.0004  Score=50.69  Aligned_cols=112  Identities=10%  Similarity=0.045  Sum_probs=66.2

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCC--CeEEEeeCChhHHHHHHHHHHhc---CCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLG--ATVHTCSRTETELNECIHHLQMK---GLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G--~~v~l~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      +.++|.|+|+ |.+|.++|..|+.+|  .+|+++|++++..+....++...   .........|..              
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~~--------------   68 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYS--------------   68 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGG--------------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccHH--------------
Confidence            3568889995 999999999999998  48999999998766555555431   222333333321              


Q ss_pred             HcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-cEEEEec
Q 024230           94 LFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGA-ASIVLMS  156 (270)
Q Consensus        94 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~-g~ii~is  156 (270)
                      .+ ...|++|.++|.....      .++-.+.+..|+.    +.+.+.+.+.+... +.++++|
T Consensus        69 ~~-~~adivvitag~~~~~------g~~r~~l~~~N~~----i~~~~~~~i~~~~p~aivivvt  121 (146)
T d1ez4a1          69 DC-KDADLVVITAGAPQKP------GESRLDLVNKNLN----ILSSIVKPVVDSGFDGIFLVAA  121 (146)
T ss_dssp             GG-TTCSEEEECCCC----------------CHHHHHH----HHHHHHHHHHHTTCCSEEEECS
T ss_pred             Hh-ccccEEEEecccccCC------CCCHHHHHHHHHH----HHHHHHHHHhhcCCCcEEEEeC
Confidence            11 4689999999974321      1122334555654    44444555555543 4444444

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.69  E-value=5.5e-05  Score=57.04  Aligned_cols=74  Identities=19%  Similarity=0.247  Sum_probs=53.1

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      +|++|+|+|++|++|...+......|++|+.+++++++.+..    ++.|....+   |..+      ...++..  ++.
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~----~~lGa~~~i---~~~~------~~~~~~~--~~g   91 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP----LALGAEEAA---TYAE------VPERAKA--WGG   91 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH----HHTTCSEEE---EGGG------HHHHHHH--TTS
T ss_pred             CCCEEEEEeccccchhhhhhhhcccccccccccccccccccc----cccccceee---ehhh------hhhhhhc--ccc
Confidence            789999999999999999999999999999999988766543    234544322   3322      1122222  257


Q ss_pred             ccEEEECCC
Q 024230           99 LNIFVNNVG  107 (270)
Q Consensus        99 id~li~~ag  107 (270)
                      +|+++.+.|
T Consensus        92 ~D~v~d~~G  100 (171)
T d1iz0a2          92 LDLVLEVRG  100 (171)
T ss_dssp             EEEEEECSC
T ss_pred             ccccccccc
Confidence            999999876

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.63  E-value=0.00013  Score=55.71  Aligned_cols=78  Identities=18%  Similarity=0.283  Sum_probs=52.2

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCe-EEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGAT-VHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~-v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      +++|||+||+|++|...++.....|++ |+.+++++++..++.+++   +....   .|..+++    +.+++++..+..
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~---gad~v---i~~~~~~----~~~~~~~~~~~G  100 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL---GFDAA---VNYKTGN----VAEQLREACPGG  100 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS---CCSEE---EETTSSC----HHHHHHHHCTTC
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc---cceEE---eeccchh----HHHHHHHHhccC
Confidence            479999999999999999988889986 555666766655544433   43332   2444322    233333333357


Q ss_pred             ccEEEECCC
Q 024230           99 LNIFVNNVG  107 (270)
Q Consensus        99 id~li~~ag  107 (270)
                      +|+++.+.|
T Consensus       101 vDvv~D~vG  109 (187)
T d1vj1a2         101 VDVYFDNVG  109 (187)
T ss_dssp             EEEEEESSC
T ss_pred             ceEEEecCC
Confidence            999999997

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.62  E-value=0.0011  Score=48.35  Aligned_cols=114  Identities=14%  Similarity=0.061  Sum_probs=70.5

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCC--eEEEeeCChhHHHHHHHHHHhc----CCeEEEEEccCCCHHHHHHHHHH
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTETELNECIHHLQMK----GLKVTGSVCDVSSRPQRQTLINT   90 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~   90 (270)
                      +-.+++|.|+|+ |.+|.++|..++.+|.  +++|++++++..+....++...    ...+.+...|..   +       
T Consensus         3 ~~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~~---~-------   71 (148)
T d1ldna1           3 NNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYD---D-------   71 (148)
T ss_dssp             TTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGG---G-------
T ss_pred             CCCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCHH---H-------
Confidence            456789999996 9999999999999985  7999999998876665556542    222333232221   1       


Q ss_pred             HHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEec
Q 024230           91 VSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMS  156 (270)
Q Consensus        91 i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~is  156 (270)
                          + ..-|++|.++|.......   +.   .+.+..|+.-    .+-+.+.+.+.. .+.++++|
T Consensus        72 ----l-~daDvvvitag~~~~~~~---~R---~dl~~~N~~i----~~~i~~~i~~~~p~a~~ivvt  123 (148)
T d1ldna1          72 ----C-RDADLVVICAGANQKPGE---TR---LDLVDKNIAI----FRSIVESVMASGFQGLFLVAT  123 (148)
T ss_dssp             ----T-TTCSEEEECCSCCCCTTT---CS---GGGHHHHHHH----HHHHHHHHHHHTCCSEEEECS
T ss_pred             ----h-ccceeEEEecccccccCc---ch---hHHHHHHHHH----HHHHHHHHHhhCCCceEEEec
Confidence                1 467999999997543221   11   1224445433    334444444443 45566654

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.54  E-value=0.00033  Score=52.62  Aligned_cols=78  Identities=14%  Similarity=0.286  Sum_probs=53.0

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCe-EEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGAT-VHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~-v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      .|.+|+|.|+ |++|...+..+...|++ |+++++++++++.. ++   .|.. +++  |..++ +   ..+++.+..++
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a-~~---~Ga~-~~i--~~~~~-~---~~~~i~~~t~g   95 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQ---LGAT-HVI--NSKTQ-D---PVAAIKEITDG   95 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HH---HTCS-EEE--ETTTS-C---HHHHHHHHTTS
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHH-HH---cCCe-EEE--eCCCc-C---HHHHHHHHcCC
Confidence            5789999987 89999999999899986 55667777766543 22   3432 222  33332 2   33444444446


Q ss_pred             cccEEEECCCC
Q 024230           98 KLNIFVNNVGT  108 (270)
Q Consensus        98 ~id~li~~ag~  108 (270)
                      .+|++|.|.|.
T Consensus        96 g~D~vid~~G~  106 (174)
T d1f8fa2          96 GVNFALESTGS  106 (174)
T ss_dssp             CEEEEEECSCC
T ss_pred             CCcEEEEcCCc
Confidence            89999999985

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.53  E-value=0.0001  Score=53.00  Aligned_cols=73  Identities=16%  Similarity=0.233  Sum_probs=55.5

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      |+++|.|. |.+|+.+|+.|.++|+.|++++.+++..+++    ...+..  .+..|.++++.+.++-      . .+.|
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~----~~~~~~--~~~gd~~~~~~l~~a~------i-~~a~   66 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAY----ASYATH--AVIANATEENELLSLG------I-RNFE   66 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHT----TTTCSE--EEECCTTCTTHHHHHT------G-GGCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHH----HHhCCc--ceeeecccchhhhccC------C-cccc
Confidence            67888866 8999999999999999999999999887654    333433  4568999987765542      1 4678


Q ss_pred             EEEECCC
Q 024230          101 IFVNNVG  107 (270)
Q Consensus       101 ~li~~ag  107 (270)
                      .+|....
T Consensus        67 ~vi~~~~   73 (134)
T d2hmva1          67 YVIVAIG   73 (134)
T ss_dssp             EEEECCC
T ss_pred             EEEEEcC
Confidence            8877765

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.49  E-value=0.0002  Score=53.53  Aligned_cols=79  Identities=15%  Similarity=0.181  Sum_probs=54.9

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH-cC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL-FN   96 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~-~~   96 (270)
                      .|.+|+|+|++|++|..++..+...|. +|+++++++++.+...    +.|.... +  |.++++-.++    +.+. .+
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~----~~Ga~~~-i--~~~~~~~~~~----~~~~~~~   95 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK----RAGADYV-I--NASMQDPLAE----IRRITES   95 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH----HHTCSEE-E--ETTTSCHHHH----HHHHTTT
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHH----HcCCcee-e--ccCCcCHHHH----HHHHhhc
Confidence            578999999999999999999999995 7999999988765432    2344332 2  3333333333    3332 22


Q ss_pred             CcccEEEECCCC
Q 024230           97 GKLNIFVNNVGT  108 (270)
Q Consensus        97 ~~id~li~~ag~  108 (270)
                      +.+|+++.++|.
T Consensus        96 ~~~d~vid~~g~  107 (170)
T d1jvba2          96 KGVDAVIDLNNS  107 (170)
T ss_dssp             SCEEEEEESCCC
T ss_pred             ccchhhhccccc
Confidence            469999999985

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.41  E-value=0.0002  Score=56.21  Aligned_cols=80  Identities=20%  Similarity=0.262  Sum_probs=55.8

Q ss_pred             CCCCCEEEEecCC----------------CcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCC
Q 024230           17 SLQGMTALVTGGT----------------KGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSS   80 (270)
Q Consensus        17 ~l~gk~vlItG~s----------------~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~   80 (270)
                      +|+||+||||+|.                |..|.+||+.+..+|++|.++.-....         .....+..  ..+.+
T Consensus         3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~---------~~p~~~~~--~~~~t   71 (223)
T d1u7za_           3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL---------PTPPFVKR--VDVMT   71 (223)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC---------CCCTTEEE--EECCS
T ss_pred             ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc---------Cccccccc--ceehh
Confidence            7999999999985                889999999999999999988653321         01112332  23445


Q ss_pred             HHHHHHHHHHHHHHcCCcccEEEECCCCCCC
Q 024230           81 RPQRQTLINTVSSLFNGKLNIFVNNVGTSVL  111 (270)
Q Consensus        81 ~~~~~~~~~~i~~~~~~~id~li~~ag~~~~  111 (270)
                      .+++...+.   ..+ ...|++|++|++...
T Consensus        72 ~~~m~~~~~---~~~-~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          72 ALEMEAAVN---ASV-QQQNIFIGCAAVADY   98 (223)
T ss_dssp             HHHHHHHHH---HHG-GGCSEEEECCBCCSE
T ss_pred             hHHHHHHHH---hhh-ccceeEeeeechhhh
Confidence            555544443   334 468999999998643

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.40  E-value=0.0054  Score=45.12  Aligned_cols=116  Identities=15%  Similarity=0.091  Sum_probs=72.7

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCC--eEEEeeCChhHHHHHHHHHHhc----CCeEEEEEccCCCHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTETELNECIHHLQMK----GLKVTGSVCDVSSRPQRQTLIN   89 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~   89 (270)
                      ..+..++|.|+|+ |.+|.++|..++.+|.  ++++++++++..+....++...    .........|..+         
T Consensus        16 ~~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~~---------   85 (160)
T d1i0za1          16 ATVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYSV---------   85 (160)
T ss_dssp             CCCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGGG---------
T ss_pred             ccCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchhh---------
Confidence            3455678999996 9999999999999996  7999999988876666556542    2222222222221         


Q ss_pred             HHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecC
Q 024230           90 TVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSS  157 (270)
Q Consensus        90 ~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss  157 (270)
                           + ..-|++|..||......   .+..   +.+..|+.    +++.+.+.+.+.. .+.++++|-
T Consensus        86 -----~-~~adiVVitAg~~~~~g---~tR~---~l~~~N~~----i~~~i~~~i~~~~p~aiiivvtN  138 (160)
T d1i0za1          86 -----T-ANSKIVVVTAGVRQQEG---ESRL---NLVQRNVN----VFKFIIPQIVKYSPDCIIIVVSN  138 (160)
T ss_dssp             -----G-TTCSEEEECCSCCCCTT---CCGG---GGHHHHHH----HHHHHHHHHHHHCTTCEEEECSS
T ss_pred             -----c-ccccEEEEecCCccccC---cchH---HHHHHHHH----HHHHHHHHHHhcCCCcEEEEeCC
Confidence                 1 57899999999753221   2221   23444544    4455555555544 455565553

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.39  E-value=0.00065  Score=50.62  Aligned_cols=77  Identities=13%  Similarity=0.119  Sum_probs=53.1

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      .|.+|+|.|+ |++|...+..+...|++|+++++++++++..    ++.|....+...+..+          +.+...+.
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a----~~lGa~~~i~~~~~~~----------~~~~~~~~   91 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDA----MKMGADHYIATLEEGD----------WGEKYFDT   91 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHH----HHHTCSEEEEGGGTSC----------HHHHSCSC
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHh----hccCCcEEeeccchHH----------HHHhhhcc
Confidence            6889999986 8999998888888899999999998877543    3345443332222211          11122267


Q ss_pred             ccEEEECCCCCC
Q 024230           99 LNIFVNNVGTSV  110 (270)
Q Consensus        99 id~li~~ag~~~  110 (270)
                      +|.++.+.+...
T Consensus        92 ~d~vi~~~~~~~  103 (168)
T d1piwa2          92 FDLIVVCASSLT  103 (168)
T ss_dssp             EEEEEECCSCST
T ss_pred             cceEEEEecCCc
Confidence            999999987643

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.38  E-value=0.00028  Score=51.78  Aligned_cols=84  Identities=13%  Similarity=0.108  Sum_probs=58.1

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      ++.+-|+|.|+||.|-+|..+|+.|.++|++|.+++|+.....+..    ..+....+...+   ...+...+.++....
T Consensus         5 ~~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~----~~~~~~v~~~~~---~~~~~~v~~~~~~~~   77 (152)
T d2pv7a2           5 INSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESI----LANADVVIVSVP---INLTLETIERLKPYL   77 (152)
T ss_dssp             SCTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHH----HTTCSEEEECSC---GGGHHHHHHHHGGGC
T ss_pred             cCCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchh----hhhccccccccc---hhhheeeeecccccc
Confidence            5667789999999999999999999999999999999887644322    123344444333   445556666666554


Q ss_pred             CCcccEEEECCC
Q 024230           96 NGKLNIFVNNVG  107 (270)
Q Consensus        96 ~~~id~li~~ag  107 (270)
                       .+=.+++.++.
T Consensus        78 -~~~~iiiD~~S   88 (152)
T d2pv7a2          78 -TENMLLADLTS   88 (152)
T ss_dssp             -CTTSEEEECCS
T ss_pred             -cCCceEEEecc
Confidence             23345555554

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.38  E-value=0.001  Score=48.37  Aligned_cols=114  Identities=14%  Similarity=0.051  Sum_probs=67.9

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCC--eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      +|.|+||+|.+|.++|..++.+|.  ++++++.++.+.+.  ..+.... .......-+ ...+..+.+        ..-
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a--~Dl~~~~-~~~~~~~~~-~~~~~~~~~--------~~a   69 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVA--ADLSHIE-TRATVKGYL-GPEQLPDCL--------KGC   69 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHH--HHHTTSS-SSCEEEEEE-SGGGHHHHH--------TTC
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhh--HHHhhhh-hhcCCCeEE-cCCChHHHh--------CCC
Confidence            689999999999999999999985  69999988765432  2333221 111111111 222323333        578


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecC
Q 024230          100 NIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSS  157 (270)
Q Consensus       100 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss  157 (270)
                      |++|..+|......   .+.   .+.++.|+.-.-.+.+.+    .+.. .+.++++|.
T Consensus        70 DivVitag~~~~~g---~sR---~~ll~~N~~i~~~i~~~i----~~~~p~~iiivvtN  118 (144)
T d1mlda1          70 DVVVIPAGVPRKPG---MTR---DDLFNTNATIVATLTAAC----AQHCPDAMICIISN  118 (144)
T ss_dssp             SEEEECCSCCCCTT---CCG---GGGHHHHHHHHHHHHHHH----HHHCTTSEEEECSS
T ss_pred             CEEEECCCcCCCCC---CCc---chHHHHHHHHHHHHHHHH----HhcCCCeEEEEecC
Confidence            99999999743221   222   234667766655555555    4443 355555553

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.36  E-value=0.00032  Score=52.44  Aligned_cols=45  Identities=18%  Similarity=0.200  Sum_probs=39.7

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHH
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHL   64 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~   64 (270)
                      ++|+|+|.|+ ||.+++++..|.+.|. +|.++.|+.++.+.+.+.+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~   61 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY   61 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh
Confidence            6889999987 8999999999999997 6999999999887776554

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.34  E-value=0.0038  Score=45.95  Aligned_cols=116  Identities=12%  Similarity=0.133  Sum_probs=71.0

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCC--eEEEeeCChhHHHHHHHHHHhc----CCeEEEEEccCCCHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTETELNECIHHLQMK----GLKVTGSVCDVSSRPQRQTLIN   89 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~   89 (270)
                      -.++..+|.|+|+ |.+|..+|..++.+|.  ++++++++++..+....++...    +........|..+         
T Consensus        15 ~~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~~---------   84 (159)
T d2ldxa1          15 DKLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYNV---------   84 (159)
T ss_dssp             CCCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGGG---------
T ss_pred             ccCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchhh---------
Confidence            3455567889995 9999999999999985  7999999998876666666542    2223222233221         


Q ss_pred             HHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecC
Q 024230           90 TVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSS  157 (270)
Q Consensus        90 ~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss  157 (270)
                           + ..-|++|..||..........+      .++.|+.    +.+.+.+.+.+.. ++.+++++-
T Consensus        85 -----~-~~adivvitag~~~~~~~~R~d------ll~~N~~----i~~~i~~~i~~~~p~~ivivvtN  137 (159)
T d2ldxa1          85 -----S-ANSKLVIITAGARMVSGQTRLD------LLQRNVA----IMKAIVPGVIQNSPDCKIIVVTN  137 (159)
T ss_dssp             -----G-TTEEEEEECCSCCCCTTTCSSC------TTHHHHH----HHHHHTTTHHHHSTTCEEEECSS
T ss_pred             -----h-ccccEEEEecccccCCCCCHHH------HHHHHHH----HHHHHHHHHhccCCCeEEEEeCC
Confidence                 1 5789999999975433222221      1333433    3444455555443 455555543

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.32  E-value=0.0003  Score=52.97  Aligned_cols=78  Identities=15%  Similarity=0.173  Sum_probs=53.3

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC-
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN-   96 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~-   96 (270)
                      .|.+|+|.|+ |++|...+......|+ +|+.+++++++++...    +.|....   +|..+++    ..+++.+..+ 
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~----~lGa~~~---i~~~~~~----~~~~v~~~t~g   94 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAK----FYGATDI---LNYKNGH----IEDQVMKLTNG   94 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHH----HHTCSEE---ECGGGSC----HHHHHHHHTTT
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHH----hhCcccc---ccccchh----HHHHHHHHhhc
Confidence            5788999976 8999999999999998 6999999988765432    3343322   2333322    2233333333 


Q ss_pred             CcccEEEECCCC
Q 024230           97 GKLNIFVNNVGT  108 (270)
Q Consensus        97 ~~id~li~~ag~  108 (270)
                      ..+|++|.++|.
T Consensus        95 ~G~D~vid~~g~  106 (174)
T d1jqba2          95 KGVDRVIMAGGG  106 (174)
T ss_dssp             SCEEEEEECSSC
T ss_pred             cCcceEEEccCC
Confidence            359999999995

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.32  E-value=0.00094  Score=50.03  Aligned_cols=80  Identities=21%  Similarity=0.284  Sum_probs=54.0

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      +|.+|+|.|+ +|+|...+.+++..|+ +|+.+++++++.+..    .+.+....+...+-.  +.+.+..+.   ..++
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a----~~~Ga~~~i~~~~~~--~~~~~~~~~---~~~~   97 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKA----KEVGATECVNPQDYK--KPIQEVLTE---MSNG   97 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH----HHTTCSEEECGGGCS--SCHHHHHHH---HTTS
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHH----HHhCCeeEEecCCch--hHHHHHHHH---HhcC
Confidence            5789999999 7899999999999995 799999999987543    233433322222221  223333322   2336


Q ss_pred             cccEEEECCCC
Q 024230           98 KLNIFVNNVGT  108 (270)
Q Consensus        98 ~id~li~~ag~  108 (270)
                      .+|++|.+.|.
T Consensus        98 G~D~vid~~G~  108 (176)
T d2jhfa2          98 GVDFSFEVIGR  108 (176)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCCEEEecCCc
Confidence            79999999985

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.30  E-value=0.00011  Score=49.43  Aligned_cols=38  Identities=24%  Similarity=0.241  Sum_probs=34.7

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChh
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTET   55 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~   55 (270)
                      +++||+|+|.|. |..|.++|+.|.++|++|.+++.+..
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            789999999998 66899999999999999999998655

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.27  E-value=0.0011  Score=45.87  Aligned_cols=40  Identities=20%  Similarity=0.180  Sum_probs=35.1

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETE   56 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~   56 (270)
                      ++|+||+|+|+|++ .+|..-++.|++.|++|.+++.....
T Consensus         8 l~l~~k~vlVvG~G-~va~~ka~~ll~~ga~v~v~~~~~~~   47 (113)
T d1pjqa1           8 CQLRDRDCLIVGGG-DVAERKARLLLEAGARLTVNALTFIP   47 (113)
T ss_dssp             ECCBTCEEEEECCS-HHHHHHHHHHHHTTBEEEEEESSCCH
T ss_pred             EEeCCCEEEEECCC-HHHHHHHHHHHHCCCeEEEEeccCCh
Confidence            58999999999985 59999999999999999998765543

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.23  E-value=0.00068  Score=50.50  Aligned_cols=75  Identities=17%  Similarity=0.243  Sum_probs=53.3

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      .|.+|+|.|+ |++|...+......|++++++++++++.+ ..++   .|....   .|..+.+....       .. +.
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~-~a~~---lGad~~---i~~~~~~~~~~-------~~-~~   93 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKRE-AAKA---LGADEV---VNSRNADEMAA-------HL-KS   93 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHH---HTCSEE---EETTCHHHHHT-------TT-TC
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHH-HHhc---cCCcEE---EECchhhHHHH-------hc-CC
Confidence            6789999986 89999999888889999999999888764 3333   344332   35555433211       11 57


Q ss_pred             ccEEEECCCCC
Q 024230           99 LNIFVNNVGTS  109 (270)
Q Consensus        99 id~li~~ag~~  109 (270)
                      +|+++.+.|..
T Consensus        94 ~D~vid~~g~~  104 (168)
T d1uufa2          94 FDFILNTVAAP  104 (168)
T ss_dssp             EEEEEECCSSC
T ss_pred             Cceeeeeeecc
Confidence            99999999853

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.22  E-value=0.0012  Score=49.62  Aligned_cols=80  Identities=18%  Similarity=0.248  Sum_probs=54.4

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      +|.+|+|+|+ |++|...+..+...|+ +|+.+++++++++...    +.|....+..-|-.+.  .+...+   ...++
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak----~~GA~~~in~~~~~~~--~~~~~~---~~~g~   98 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAM----AVGATECISPKDSTKP--ISEVLS---EMTGN   98 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH----HHTCSEEECGGGCSSC--HHHHHH---HHHTS
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHH----hcCCcEEECccccchH--HHHHHH---Hhccc
Confidence            5889999986 9999999999999995 7999999999886433    2344443322222211  122221   12235


Q ss_pred             cccEEEECCCC
Q 024230           98 KLNIFVNNVGT  108 (270)
Q Consensus        98 ~id~li~~ag~  108 (270)
                      .+|++|.+.|.
T Consensus        99 G~d~vi~~~g~  109 (176)
T d1d1ta2          99 NVGYTFEVIGH  109 (176)
T ss_dssp             CCCEEEECSCC
T ss_pred             cceEEEEeCCc
Confidence            79999999985

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.19  E-value=0.0026  Score=46.22  Aligned_cols=114  Identities=16%  Similarity=0.148  Sum_probs=67.0

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCC--eEEEeeCChhHHHHHHHHHHhc----CCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTETELNECIHHLQMK----GLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      |+|.|+|+ |.+|.++|..++.+|.  ++++++++++..+....++.+.    .........|..+              
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~~~--------------   66 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDWAA--------------   66 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCGGG--------------
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCHHH--------------
Confidence            78899995 9999999999999984  7999999998876555555432    2222322222211              


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-cEEEEec
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGA-ASIVLMS  156 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~-g~ii~is  156 (270)
                      + ..-|++|.+||......  +-..++-.+.+..|.    .+++.+.+.+.+... +.++++|
T Consensus        67 l-~~adiVVitaG~~~~~~--~~~g~~R~~l~~~N~----~i~~~i~~~i~~~~p~aivivvt  122 (146)
T d1hyha1          67 L-ADADVVISTLGNIKLQQ--DNPTGDRFAELKFTS----SMVQSVGTNLKESGFHGVLVVIS  122 (146)
T ss_dssp             G-TTCSEEEECCSCGGGTC---------CTTHHHHH----HHHHHHHHHHHHTTCCSEEEECS
T ss_pred             h-ccccEEEEecccccccc--ccCCccHHHHHHHHH----HHHHHHHHHHhhcCCCeEEEEec
Confidence            1 46799999999743110  001111122344454    444555666666543 4455444

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.18  E-value=0.0016  Score=48.13  Aligned_cols=76  Identities=16%  Similarity=0.191  Sum_probs=50.2

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      .|.+|+|.|+ |++|...+..+...|++|+.+++++++++..    ++.|....   .|..+.+..+.+.    +.. ..
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a----~~~Ga~~~---i~~~~~~~~~~~~----~~~-~g   93 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELA----RKLGASLT---VNARQEDPVEAIQ----RDI-GG   93 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----HHTTCSEE---EETTTSCHHHHHH----HHH-SS
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhh----hccCcccc---ccccchhHHHHHH----Hhh-cC
Confidence            5789999886 9999999999999999999999998887543    33454432   2444433333332    233 34


Q ss_pred             ccEEEECCC
Q 024230           99 LNIFVNNVG  107 (270)
Q Consensus        99 id~li~~ag  107 (270)
                      .+..|.+++
T Consensus        94 ~~~~i~~~~  102 (166)
T d1llua2          94 AHGVLVTAV  102 (166)
T ss_dssp             EEEEEECCS
T ss_pred             Ccccccccc
Confidence            555555554

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.15  E-value=0.00051  Score=52.56  Aligned_cols=44  Identities=23%  Similarity=0.286  Sum_probs=38.6

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHH
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQ   65 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~   65 (270)
                      |+|.|.|+ |-+|..+|..|+..|++|++++++++.+++..+.++
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~   48 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIE   48 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHH
Confidence            69999999 789999999999999999999999988766655443

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.13  E-value=0.0062  Score=44.04  Aligned_cols=110  Identities=9%  Similarity=0.032  Sum_probs=65.2

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCC--eEEEeeCChhH--HHHHHHHHHh---c-CC--eEEEEEccCCCHHHHHHHHHHH
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTETE--LNECIHHLQM---K-GL--KVTGSVCDVSSRPQRQTLINTV   91 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~--~v~l~~r~~~~--~~~~~~~~~~---~-~~--~~~~~~~D~~~~~~~~~~~~~i   91 (270)
                      +|.|+|++|.+|.++|..++.+|.  +++++++++..  .+....++..   . ..  ++.....+  +.          
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~--d~----------   69 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDE--NL----------   69 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETT--CG----------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcc--hH----------
Confidence            689999999999999999999994  89999988642  3333333332   1 12  22222221  11          


Q ss_pred             HHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEe
Q 024230           92 SSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLM  155 (270)
Q Consensus        92 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~i  155 (270)
                       +.+ ..-|++|.+||.....   ..+..   +.+..|..=.-.+.+.+    .+.....++.+
T Consensus        70 -~~l-~~aDvVVitAG~~~~~---g~sR~---dl~~~Na~iv~~i~~~i----~~~~~~~iivV  121 (145)
T d1hyea1          70 -RII-DESDVVIITSGVPRKE---GMSRM---DLAKTNAKIVGKYAKKI----AEICDTKIFVI  121 (145)
T ss_dssp             -GGG-TTCSEEEECCSCCCCT---TCCHH---HHHHHHHHHHHHHHHHH----HHHCCCEEEEC
T ss_pred             -HHh-ccceEEEEecccccCC---CCChh---hhhhhhHHHHHHHHHHH----hccCCCeEEEE
Confidence             111 4689999999974321   23433   34566665544444444    44433445544

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.10  E-value=0.002  Score=47.55  Aligned_cols=81  Identities=11%  Similarity=0.067  Sum_probs=54.7

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHH--h--------cCCeEEEEEccCCCHHHHHHHHHHH
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQ--M--------KGLKVTGSVCDVSSRPQRQTLINTV   91 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~--~--------~~~~~~~~~~D~~~~~~~~~~~~~i   91 (270)
                      +|.|.|. |-+|.++|+.|.++|++|++++|+++..++..+.-.  .        ...++.++.+   ..+.++++++++
T Consensus         2 kI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilav---p~~~~~~vl~~l   77 (165)
T d2f1ka2           2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCT---PIQLILPTLEKL   77 (165)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECS---CHHHHHHHHHHH
T ss_pred             EEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccC---cHhhhhhhhhhh
Confidence            5777865 999999999999999999999999887765443210  0        1223333322   356778888888


Q ss_pred             HHHcCCcccEEEECCC
Q 024230           92 SSLFNGKLNIFVNNVG  107 (270)
Q Consensus        92 ~~~~~~~id~li~~ag  107 (270)
                      ...+ .+=.++++.++
T Consensus        78 ~~~l-~~~~iv~~~~s   92 (165)
T d2f1ka2          78 IPHL-SPTAIVTDVAS   92 (165)
T ss_dssp             GGGS-CTTCEEEECCS
T ss_pred             hhhc-ccccceeeccc
Confidence            7665 34445556544

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.10  E-value=0.0048  Score=46.16  Aligned_cols=115  Identities=7%  Similarity=-0.012  Sum_probs=65.5

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCC-------eEEEeeCChh--HHHHHHHHHHhcCC-eEEEEEccCCCHHHHHHHHH
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGA-------TVHTCSRTET--ELNECIHHLQMKGL-KVTGSVCDVSSRPQRQTLIN   89 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~-------~v~l~~r~~~--~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~   89 (270)
                      ..+|.||||+|.||.+++..|++..-       .+++++..+.  .++....+++.... .......- ++.   .+.+ 
T Consensus        24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~-~~~---~~~~-   98 (175)
T d7mdha1          24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIG-IDP---YEVF-   98 (175)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE-SCH---HHHT-
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCcccc-ccc---hhhc-
Confidence            34799999999999999999998532       4667776553  34555555544321 11111111 221   1122 


Q ss_pred             HHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcE-EEEec
Q 024230           90 TVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRAS-GAAS-IVLMS  156 (270)
Q Consensus        90 ~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~-ii~is  156 (270)
                             ...|++|..+|....   ...+.+   +.++.|..    +++.+.+.+.+. .... +++++
T Consensus        99 -------~~aDvVvi~ag~~rk---pg~tR~---Dll~~N~~----I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1          99 -------EDVDWALLIGAKPRG---PGMERA---ALLDINGQ----IFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             -------TTCSEEEECCCCCCC---TTCCHH---HHHHHHHH----HHHHHHHHHHHHSCTTCEEEECS
T ss_pred             -------cCCceEEEeeccCCC---CCCcHH---HHHHHHHH----HHHHHHHHHHhhCCCCcEEEEec
Confidence                   578999999988532   123444   44666644    444445555554 2234 44443

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.10  E-value=0.0072  Score=43.48  Aligned_cols=110  Identities=11%  Similarity=0.019  Sum_probs=66.0

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCC--eEEEeeCC--hhHHHHHHHHHHh---cCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGA--TVHTCSRT--ETELNECIHHLQM---KGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~--~v~l~~r~--~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      +|.|+|++|.+|.++|..++.+|.  ++++++.+  ++..+....++..   ..........|.   ++           
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~~-----------   67 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY---ED-----------   67 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG---GG-----------
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH---HH-----------
Confidence            689999999999999999999985  69999864  3333333333432   222333222222   11           


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEec
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMS  156 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~is  156 (270)
                      + ..-|++|..||... .+  ..+.   .+.++.|..    +++.+.+.+.+.. ++.+++++
T Consensus        68 ~-~~aDiVvitaG~~~-~~--g~~R---~dl~~~N~~----I~~~i~~~i~~~~p~~i~ivvt  119 (142)
T d1o6za1          68 T-AGSDVVVITAGIPR-QP--GQTR---IDLAGDNAP----IMEDIQSSLDEHNDDYISLTTS  119 (142)
T ss_dssp             G-TTCSEEEECCCCCC-CT--TCCH---HHHHHHHHH----HHHHHHHHHHTTCSCCEEEECC
T ss_pred             h-hhcCEEEEeccccc-cc--CCch---hhHHHHHHH----HHHHHHHHHHhcCCCceEEEec
Confidence            1 46899999999643 22  1233   345666654    4444555556654 34555554

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=97.08  E-value=0.002  Score=48.20  Aligned_cols=85  Identities=14%  Similarity=0.151  Sum_probs=61.0

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHH---------------HhcCCeEEEEEccCCCHHHHH
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHL---------------QMKGLKVTGSVCDVSSRPQRQ   85 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~---------------~~~~~~~~~~~~D~~~~~~~~   85 (270)
                      ++|-|.|- |-+|..+|+.|+++|++|++++|++++.+++.+.-               .+.-.....+...+.+.+.+.
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v~   81 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVD   81 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHH
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchHHHH
Confidence            46777877 89999999999999999999999999887765431               111112234445666777888


Q ss_pred             HHHHHHHHHcCCcccEEEECCC
Q 024230           86 TLINTVSSLFNGKLNIFVNNVG  107 (270)
Q Consensus        86 ~~~~~i~~~~~~~id~li~~ag  107 (270)
                      +..+.+.... .+=+++|.+.-
T Consensus        82 ~v~~~l~~~~-~~g~iiid~sT  102 (176)
T d2pgda2          82 NFIEKLVPLL-DIGDIIIDGGN  102 (176)
T ss_dssp             HHHHHHHHHC-CTTCEEEECSC
T ss_pred             HHHHHHHhcc-ccCcEEEecCc
Confidence            8888887766 45566776654

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.08  E-value=0.0098  Score=42.81  Aligned_cols=111  Identities=12%  Similarity=0.073  Sum_probs=66.8

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCC--eEEEeeCChhHHHHHHHHHHhc---CCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTETELNECIHHLQMK---GLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      .+|.|+|+ |.+|.++|..++.+|.  ++++++++++..+....+++..   .........+-.+      .+       
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~~~------~~-------   67 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPE------IC-------   67 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGG------GG-------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCCHH------Hh-------
Confidence            36778896 9999999999999985  7999999998776555555442   1112222221111      11       


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEec
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMS  156 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~is  156 (270)
                       ..-|++|..+|....   ...+..   +.+..|..=    ++.+.+.+.+.. .+.++++|
T Consensus        68 -~daDvVVitaG~~~~---~g~~R~---dl~~~N~~i----~~~i~~~i~~~~p~ai~ivvt  118 (143)
T d1llda1          68 -RDADMVVITAGPRQK---PGQSRL---ELVGATVNI----LKAIMPNLVKVAPNAIYMLIT  118 (143)
T ss_dssp             -TTCSEEEECCCCCCC---TTCCHH---HHHHHHHHH----HHHHHHHHHHHCTTSEEEECC
T ss_pred             -hCCcEEEEecccccC---CCCchh---hhhhhhHHH----HHHHHHHHHhhCCCeEEEEeC
Confidence             457999999997432   123333   345666543    344444445544 34555554

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=97.04  E-value=0.003  Score=45.64  Aligned_cols=110  Identities=7%  Similarity=-0.022  Sum_probs=61.7

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCC--eEEEeeCChhHHHHHHHHHHhcC---CeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTETELNECIHHLQMKG---LKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      ++|.|+|+ |.+|.++|..++.+|.  ++++++++++..+....++....   ........   +.+           .+
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~~~-----------~~   66 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---DYS-----------DV   66 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CGG-----------GG
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---cHH-----------Hh
Confidence            35666786 9999999999999985  79999999887655555554321   12221111   111           12


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEec
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMS  156 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~is  156 (270)
                       ..-|++|..||.... +  ..+   -.+.+..|+.    +++.+.+.+.+.. .+.++++|
T Consensus        67 -~~adivvitag~~~~-~--~~~---r~~l~~~N~~----i~~~i~~~i~~~~p~ai~ivvt  117 (142)
T d1y6ja1          67 -KDCDVIVVTAGANRK-P--GET---RLDLAKKNVM----IAKEVTQNIMKYYNHGVILVVS  117 (142)
T ss_dssp             -TTCSEEEECCCC---------C---HHHHHHHHHH----HHHHHHHHHHHHCCSCEEEECS
T ss_pred             -CCCceEEEecccccC-c--Ccc---hhHHhhHHHH----HHHHHHHHhhccCCCceEEEec
Confidence             468999999997532 1  122   2344556654    4444455555543 35555554

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.03  E-value=0.00048  Score=51.99  Aligned_cols=43  Identities=30%  Similarity=0.315  Sum_probs=37.6

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHH
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNE   59 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~   59 (270)
                      ..+++++||+||+||+|...++.....|++|+.+++++++.+.
T Consensus        29 ~~~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~   71 (177)
T d1o89a2          29 RPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEY   71 (177)
T ss_dssp             CGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHH
T ss_pred             CCCCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHH
Confidence            3355699999999999999999999999999999999888654

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.02  E-value=0.015  Score=41.97  Aligned_cols=114  Identities=14%  Similarity=0.102  Sum_probs=65.6

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHC-C--CeEEEeeCChhHHHHHHHHHHhcCCeEEEE-EccCCCHHHHHHHHHHHHHHcC
Q 024230           21 MTALVTGGTKGLGLAVVEELSML-G--ATVHTCSRTETELNECIHHLQMKGLKVTGS-VCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~-G--~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      .+|.|+|++|.+|.++|..|+.+ +  .++++++..+. .+....++.......... ...-.+   .+ .+        
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~-~~g~a~Dl~h~~~~~~~~~~~~~~~---~~-~~--------   67 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPV-TPGVAVDLSHIPTAVKIKGFSGEDA---TP-AL--------   67 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTT-HHHHHHHHHTSCSSCEEEEECSSCC---HH-HH--------
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEeccccc-chhHHHHHHCCccccCCcEEEcCCC---cc-cc--------
Confidence            36889999999999999988643 4  68999998653 444444554432221111 112222   22 22        


Q ss_pred             CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecC
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSS  157 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss  157 (270)
                      ..-|++|.++|......   .+.   .+.+..|..-.-.+.+.+    .+.. ++.++++|.
T Consensus        68 ~~aDvvvitaG~~~k~g---~~R---~dl~~~N~~i~~~v~~~i----~~~~p~aivivvtN  119 (145)
T d2cmda1          68 EGADVVLISAGVRRKPG---MDR---SDLFNVNAGIVKNLVQQV----AKTCPKACIGIITN  119 (145)
T ss_dssp             TTCSEEEECCSCCCCTT---CCG---GGGHHHHHHHHHHHHHHH----HHHCTTSEEEECSS
T ss_pred             CCCCEEEECCCccCCCC---cch---hhHHHHHHHHHHHHHHHH----HhhCCCcEEEEccC
Confidence            46799999999853221   222   234566655444444444    4443 355666554

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.02  E-value=0.0076  Score=43.24  Aligned_cols=109  Identities=8%  Similarity=0.024  Sum_probs=66.6

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCC--eEEEeeCChhHHHHHHHHHHhc---CCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTETELNECIHHLQMK---GLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      ++.|+|+ |.+|.++|..++.++.  ++++++++++.++....++...   .........|.   ++           + 
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~---~~-----------~-   65 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDY---AD-----------L-   65 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCG---GG-----------G-
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcH---HH-----------h-
Confidence            6778896 8999999999999984  7999999988776555544432   12222222221   11           1 


Q ss_pred             CcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-cEEEEec
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGA-ASIVLMS  156 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~-g~ii~is  156 (270)
                      ..-|++|.++|.....   ..+..   +.+..|.    .+++.+.+.+.+... +.++++|
T Consensus        66 ~~adivvitag~~~~~---g~~r~---dl~~~N~----~I~~~i~~~i~~~~p~aivivvt  116 (140)
T d1a5za1          66 KGSDVVIVAAGVPQKP---GETRL---QLLGRNA----RVMKEIARNVSKYAPDSIVIVVT  116 (140)
T ss_dssp             TTCSEEEECCCCCCCS---SCCHH---HHHHHHH----HHHHHHHHHHHHHCTTCEEEECS
T ss_pred             cCCCEEEEecccccCC---Ccchh---hhhcccc----chHHHHHHHHHhcCCCcEEEEeC
Confidence            4679999999975422   22332   3344554    345556666666543 4444444

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.01  E-value=0.0003  Score=52.69  Aligned_cols=79  Identities=23%  Similarity=0.196  Sum_probs=54.0

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH-HHHHc
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINT-VSSLF   95 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-i~~~~   95 (270)
                      ..++.+|||+||+||+|...++.....|++|+.+.+++++.+.+    ++.|....+..      +   +...+ +....
T Consensus        21 ~~~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~----~~lGad~vi~~------~---~~~~~~~~~~~   87 (167)
T d1tt7a2          21 SPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL----KQLGASEVISR------E---DVYDGTLKALS   87 (167)
T ss_dssp             CGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH----HHHTCSEEEEH------H---HHCSSCCCSSC
T ss_pred             CCCCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHH----HhhcccceEec------c---chhchhhhccc
Confidence            33577899999999999999998888899999999998876543    33344433211      1   11111 12222


Q ss_pred             CCcccEEEECCCC
Q 024230           96 NGKLNIFVNNVGT  108 (270)
Q Consensus        96 ~~~id~li~~ag~  108 (270)
                      ++.+|+++.+.|.
T Consensus        88 ~~gvd~vid~vgg  100 (167)
T d1tt7a2          88 KQQWQGAVDPVGG  100 (167)
T ss_dssp             CCCEEEEEESCCT
T ss_pred             CCCceEEEecCcH
Confidence            3579999999874

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=97.01  E-value=0.0031  Score=48.11  Aligned_cols=80  Identities=21%  Similarity=0.273  Sum_probs=52.5

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      .|.+|+|.|+ |++|...+......|+ +|+++++++++++..    ++.|....   .|-.+ +++.+.+.++-  -+.
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a----~~~Ga~~~---~~~~~-~~~~~~i~~~t--~g~   93 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA----KAQGFEIA---DLSLD-TPLHEQIAALL--GEP   93 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH----HHTTCEEE---ETTSS-SCHHHHHHHHH--SSS
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhh----hhccccEE---EeCCC-cCHHHHHHHHh--CCC
Confidence            6789999985 8999888888878887 688899998876543    34454432   22223 23222222221  124


Q ss_pred             cccEEEECCCCC
Q 024230           98 KLNIFVNNVGTS  109 (270)
Q Consensus        98 ~id~li~~ag~~  109 (270)
                      .+|++|.+.|..
T Consensus        94 g~D~vid~vG~~  105 (195)
T d1kola2          94 EVDCAVDAVGFE  105 (195)
T ss_dssp             CEEEEEECCCTT
T ss_pred             CcEEEEECcccc
Confidence            699999999864

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=97.01  E-value=0.0024  Score=47.74  Aligned_cols=80  Identities=19%  Similarity=0.220  Sum_probs=54.4

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHH-HHHHHHHHHHHc
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQ-RQTLINTVSSLF   95 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~i~~~~   95 (270)
                      -.|.+|+|.|+ |++|...+..+...|+ +|+.+++++++++...    +.|....+   |.++.+. +.+..   ....
T Consensus        26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~----~lGa~~~i---~~~~~d~~~~~~~---~~~~   94 (174)
T d1p0fa2          26 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI----ELGATECL---NPKDYDKPIYEVI---CEKT   94 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH----HTTCSEEE---CGGGCSSCHHHHH---HHHT
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHH----HcCCcEEE---cCCCchhHHHHHH---HHhc
Confidence            46789999985 8999999999999997 6899999998876543    34544332   3222221 22222   2223


Q ss_pred             CCcccEEEECCCC
Q 024230           96 NGKLNIFVNNVGT  108 (270)
Q Consensus        96 ~~~id~li~~ag~  108 (270)
                      ++.+|++|.++|.
T Consensus        95 ~~G~d~vid~~g~  107 (174)
T d1p0fa2          95 NGGVDYAVECAGR  107 (174)
T ss_dssp             TSCBSEEEECSCC
T ss_pred             CCCCcEEEEcCCC
Confidence            3579999999985

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=96.99  E-value=0.0057  Score=44.06  Aligned_cols=110  Identities=11%  Similarity=0.049  Sum_probs=64.3

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhc----CCeEEEEE-ccCCCHHHHHHHHHHHHHH
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMK----GLKVTGSV-CDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~----~~~~~~~~-~D~~~~~~~~~~~~~i~~~   94 (270)
                      |+|.|+|+ |.+|.++|..|+.++. ++++++.+++..+....++...    .....+.. -|..+              
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~~--------------   66 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYAD--------------   66 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGG--------------
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHHH--------------
Confidence            57888886 9999999999999984 8999999887765544444321    11221211 12111              


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEec
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMS  156 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~is  156 (270)
                      + ..-|++|.+||......   .+   -.+.+..|+    .+++...+.+.+.. .+.++++|
T Consensus        67 ~-~~advvvitag~~~~~~---~~---r~dl~~~N~----~i~~~i~~~i~k~~p~aivivvt  118 (142)
T d1uxja1          67 T-ANSDVIVVTSGAPRKPG---MS---REDLIKVNA----DITRACISQAAPLSPNAVIIMVN  118 (142)
T ss_dssp             G-TTCSEEEECCSCC---------------CHHHHH----HHHHHHHHHHGGGCTTCEEEECS
T ss_pred             h-cCCCEEEEeeeccCCcC---cc---hhHHHhHHH----HHHHHHHHHHhccCCCceEEEeC
Confidence            1 46899999999754211   11   223345554    35566666666654 34444443

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.97  E-value=0.00084  Score=50.36  Aligned_cols=42  Identities=21%  Similarity=0.159  Sum_probs=37.5

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHH
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIH   62 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~   62 (270)
                      .|++.|.|+ |.+|.++|..|+++|++|.+++|+++..+++.+
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~   42 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQD   42 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence            489999999 899999999999999999999999888766543

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=96.97  E-value=0.0037  Score=45.70  Aligned_cols=115  Identities=9%  Similarity=0.058  Sum_probs=65.1

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCC---------eEEEeeCChhHHHHHHHHHHhcC-CeEEEEEccCCCHHHHHHHHH
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGA---------TVHTCSRTETELNECIHHLQMKG-LKVTGSVCDVSSRPQRQTLIN   89 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~---------~v~l~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~   89 (270)
                      ..+|.|+||+|.+|.+++..|+..+.         +++..+++.+..+....++.... .....+...-.+    .+.+ 
T Consensus         4 p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-   78 (154)
T d1y7ta1           4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDP----KVAF-   78 (154)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCH----HHHT-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCch----hhhc-
Confidence            34899999999999999999998763         23333445555555555544432 122222222221    1122 


Q ss_pred             HHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-C-CcEEEEec
Q 024230           90 TVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRAS-G-AASIVLMS  156 (270)
Q Consensus        90 ~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~-~g~ii~is  156 (270)
                             ...|++|.++|....   ...+.++   .+..|+.-.-.+    .+.+.+. . ...++++|
T Consensus        79 -------~~advViitaG~~~~---pg~~r~d---l~~~N~~i~~~~----~~~i~k~a~~~~~vivvs  130 (154)
T d1y7ta1          79 -------KDADYALLVGAAPRK---AGMERRD---LLQVNGKIFTEQ----GRALAEVAKKDVKVLVVG  130 (154)
T ss_dssp             -------TTCSEEEECCCCCCC---TTCCHHH---HHHHHHHHHHHH----HHHHHHHSCTTCEEEECS
T ss_pred             -------ccccEEEeecCcCCC---CCCcHHH---HHHHHHHHHHHH----HHHHHHhCCCCcEEEEec
Confidence                   578999999998532   2344443   355555544444    4444553 2 34455544

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.95  E-value=0.0021  Score=46.86  Aligned_cols=76  Identities=11%  Similarity=0.030  Sum_probs=58.9

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcccE
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNI  101 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~  101 (270)
                      .++|.|. +.+|+.+++.|.++|..|++++.+++...+...+....  .+.++..|.++++.++++-      . .+.|.
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~--~~~vi~Gd~~d~~~L~~a~------i-~~a~~   74 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGD--NADVIPGDSNDSSVLKKAG------I-DRCRA   74 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCT--TCEEEESCTTSHHHHHHHT------T-TTCSE
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcC--CcEEEEccCcchHHHHHhc------c-ccCCE
Confidence            3677777 79999999999999999999999988766666655443  4677889999987665543      1 57888


Q ss_pred             EEECCC
Q 024230          102 FVNNVG  107 (270)
Q Consensus       102 li~~ag  107 (270)
                      +|.+..
T Consensus        75 vi~~~~   80 (153)
T d1id1a_          75 ILALSD   80 (153)
T ss_dssp             EEECSS
T ss_pred             EEEccc
Confidence            887764

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.94  E-value=0.00076  Score=49.26  Aligned_cols=37  Identities=24%  Similarity=0.338  Sum_probs=33.7

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeC
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSR   52 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r   52 (270)
                      .+.|+||++||+|| |.+|..-++.|++.|++|++++.
T Consensus         8 ~~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap   44 (150)
T d1kyqa1           8 AHQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSP   44 (150)
T ss_dssp             EECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             heeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC
Confidence            46799999999999 56999999999999999999964

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.93  E-value=0.0024  Score=47.55  Aligned_cols=80  Identities=19%  Similarity=0.261  Sum_probs=51.8

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      .|.+|+|.|+ +|+|...+..+...|+ +|+.+++++++.+. .+++   |....+..-+  +.+.+.+.+   ....++
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~-ak~l---Ga~~~i~~~~--~~~~~~~~~---~~~~~~   97 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFAR-AKEF---GATECINPQD--FSKPIQEVL---IEMTDG   97 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHH-HHHH---TCSEEECGGG--CSSCHHHHH---HHHTTS
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHH-HHHh---CCcEEEeCCc--hhhHHHHHH---HHHcCC
Confidence            6789999987 5899999999999997 57777887777543 3333   4333221111  112233333   333336


Q ss_pred             cccEEEECCCC
Q 024230           98 KLNIFVNNVGT  108 (270)
Q Consensus        98 ~id~li~~ag~  108 (270)
                      .+|++|.+.|.
T Consensus        98 g~D~vid~~G~  108 (176)
T d2fzwa2          98 GVDYSFECIGN  108 (176)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCcEeeecCCC
Confidence            79999999984

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.88  E-value=0.0007  Score=51.46  Aligned_cols=44  Identities=14%  Similarity=0.132  Sum_probs=38.0

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHH
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQ   65 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~   65 (270)
                      |+|.|.|+ |-+|..+|..|+..|++|++++++++.+++..+.+.
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~   48 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAA   48 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhh
Confidence            57899999 889999999999999999999999988766555443

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.87  E-value=0.0033  Score=46.27  Aligned_cols=40  Identities=23%  Similarity=0.266  Sum_probs=34.8

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHH
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNE   59 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~   59 (270)
                      .|.+|+|.|+ |++|...+..+...|++|+++++++++++.
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~   66 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLEL   66 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhh
Confidence            5789999865 999999999999999999999999888654

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=96.86  E-value=0.013  Score=41.94  Aligned_cols=110  Identities=9%  Similarity=0.003  Sum_probs=65.4

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCC--CeEEEeeCChhHHHHHHHHHHhc----CCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           22 TALVTGGTKGLGLAVVEELSMLG--ATVHTCSRTETELNECIHHLQMK----GLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G--~~v~l~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      +|.|+|+ |.+|.+++..++..|  .+++|++.+++.++.....+...    .....+...+  +.+.           +
T Consensus         2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~--~~~~-----------~   67 (142)
T d1guza1           2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSN--DYAD-----------T   67 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEES--CGGG-----------G
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecC--CHHH-----------h
Confidence            5788896 999999999999998  48999999988765544444332    2223322222  1111           1


Q ss_pred             CCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEec
Q 024230           96 NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMS  156 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~is  156 (270)
                       ...|++|.++|.....   ..+.   .+.++.|..=...+.+.+    .+.. .+.++++|
T Consensus        68 -~dadvvvitag~~~~~---g~~r---~~l~~~N~~i~~~i~~~i----~~~~p~aivivvt  118 (142)
T d1guza1          68 -ANSDIVIITAGLPRKP---GMTR---EDLLMKNAGIVKEVTDNI----MKHSKNPIIIVVS  118 (142)
T ss_dssp             -TTCSEEEECCSCCCCT---TCCH---HHHHHHHHHHHHHHHHHH----HHHCSSCEEEECC
T ss_pred             -cCCeEEEEEEecCCCC---CCch---HHHHHHHHHHHHHHHHHh----hccCCCeEEEEec
Confidence             4689999999975322   1232   234555555444444444    4433 34555554

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=96.84  E-value=0.0057  Score=44.68  Aligned_cols=119  Identities=8%  Similarity=0.011  Sum_probs=68.2

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhc----CCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMK----GLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      -+.++|.|+|+ |.+|..+|..++..+. ++++++.+++..+.....+...    +........  .+.   +..+    
T Consensus         5 ~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~--~~~---~~~~----   74 (154)
T d1pzga1           5 QRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE--YSY---EAAL----   74 (154)
T ss_dssp             SCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE--CSH---HHHH----
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEecc--Cch---hhhh----
Confidence            35578899997 9999999999999984 8999999987765555544431    111111111  111   1122    


Q ss_pred             HHcCCcccEEEECCCCCCCCC--CCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEecC
Q 024230           93 SLFNGKLNIFVNNVGTSVLKP--TLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSS  157 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~iss  157 (270)
                          ..-|++|.++|......  -.+.+..   +.+..|..-...+    .+.+.+.. .+.++++|.
T Consensus        75 ----~~adiVvitag~~~~~g~~~~~~tR~---~l~~~n~~iv~~i----~~~i~~~~p~aiviivsN  131 (154)
T d1pzga1          75 ----TGADCVIVTAGLTKVPGKPDSEWSRN---DLLPFNSKIIREI----GQNIKKYCPKTFIIVVTN  131 (154)
T ss_dssp             ----TTCSEEEECCSCSSCTTCCGGGCCGG---GGHHHHHHHHHHH----HHHHHHHCTTCEEEECCS
T ss_pred             ----cCCCeEEEecccccCCCCCCcccchh---hhhhhhHHHHHHH----HHHHHhcCCCcEEEEeCC
Confidence                46899999998753211  1122322   2344455444444    44444444 345555543

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.84  E-value=0.0054  Score=45.76  Aligned_cols=80  Identities=18%  Similarity=0.196  Sum_probs=52.9

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      .|.+|+|.| +|+||...+..+...|+ +|+++++++++++..    ++.|.... +...-.+ +......+..   .++
T Consensus        28 ~G~~VlV~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a----~~~Ga~~~-i~~~~~~-~~~~~~~~~~---~~~   97 (174)
T d1e3ia2          28 PGSTCAVFG-LGCVGLSAIIGCKIAGASRIIAIDINGEKFPKA----KALGATDC-LNPRELD-KPVQDVITEL---TAG   97 (174)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH----HHTTCSEE-ECGGGCS-SCHHHHHHHH---HTS
T ss_pred             CCCEEEEEC-CChHHHHHHHHHHHhCCceeeeeccchHHHHHH----HHhCCCcc-cCCccch-hhhhhhHhhh---hcC
Confidence            578999997 59999999999999998 588889988876432    33444332 2211111 1222233222   236


Q ss_pred             cccEEEECCCC
Q 024230           98 KLNIFVNNVGT  108 (270)
Q Consensus        98 ~id~li~~ag~  108 (270)
                      .+|++|.|+|.
T Consensus        98 G~d~vie~~G~  108 (174)
T d1e3ia2          98 GVDYSLDCAGT  108 (174)
T ss_dssp             CBSEEEESSCC
T ss_pred             CCcEEEEeccc
Confidence            89999999995

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.78  E-value=0.0016  Score=50.00  Aligned_cols=43  Identities=23%  Similarity=0.312  Sum_probs=38.5

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNE   59 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~   59 (270)
                      .+|+||+|+|.| .|.+|..+|+.|.+.|++|++++.+.+....
T Consensus        23 ~~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~   65 (201)
T d1c1da1          23 GSLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAH   65 (201)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHH
Confidence            479999999997 6789999999999999999999998776654

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.74  E-value=0.0015  Score=49.08  Aligned_cols=50  Identities=16%  Similarity=0.143  Sum_probs=43.0

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHh
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQM   66 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~   66 (270)
                      ..+++||+|+|.|+ ||.+++++..|.+.| +|.++.|+.++.+++.+.+..
T Consensus        13 ~~~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~   62 (177)
T d1nvta1          13 IGRVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAE   62 (177)
T ss_dssp             HCCCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHH
T ss_pred             CCCcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHH
Confidence            45799999999987 678999999998777 999999999998888777754

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.72  E-value=0.0028  Score=46.62  Aligned_cols=84  Identities=10%  Similarity=0.073  Sum_probs=55.2

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHH-------hcCCeEEEEEccCCCHHHHHHHH---HHH
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQ-------MKGLKVTGSVCDVSSRPQRQTLI---NTV   91 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~-------~~~~~~~~~~~D~~~~~~~~~~~---~~i   91 (270)
                      +|-|.|- |-+|..+|+.|+++|++|++++|+++..+++.+.-.       +.-.+..++...+.+.+.+++++   +.+
T Consensus         2 kIgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~~~~~~   80 (161)
T d1vpda2           2 KVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGI   80 (161)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred             EEEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHhCCcch
Confidence            4666755 899999999999999999999999988776543110       00012234455677777777776   334


Q ss_pred             HHHcCCcccEEEECCC
Q 024230           92 SSLFNGKLNIFVNNVG  107 (270)
Q Consensus        92 ~~~~~~~id~li~~ag  107 (270)
                      .... .+=+++|.+.-
T Consensus        81 ~~~~-~~g~iiid~sT   95 (161)
T d1vpda2          81 IEGA-KPGTVLIDMSS   95 (161)
T ss_dssp             HHHC-CTTCEEEECSC
T ss_pred             hhcc-CCCCEEEECCC
Confidence            4443 34456666554

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=96.68  E-value=0.0062  Score=45.18  Aligned_cols=79  Identities=19%  Similarity=0.270  Sum_probs=52.1

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHH-HHHHHHHHHHHcC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQ-RQTLINTVSSLFN   96 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~i~~~~~   96 (270)
                      .|.+|+|.|+ +++|...+..++..|+ +|+.+++++++++..    .+.|....+   |-.++++ .++....   ..+
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a----~~~GAd~~i---n~~~~~~~~~~~~~~---~~~   96 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKA----KVFGATDFV---NPNDHSEPISQVLSK---MTN   96 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH----HHTTCCEEE---CGGGCSSCHHHHHHH---HHT
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHH----HHcCCcEEE---cCCCcchhHHHHHHh---hcc
Confidence            6788999975 7789988888999887 588899998887543    344544332   2222221 1222222   222


Q ss_pred             CcccEEEECCCC
Q 024230           97 GKLNIFVNNVGT  108 (270)
Q Consensus        97 ~~id~li~~ag~  108 (270)
                      +.+|+++.+.|.
T Consensus        97 ~G~d~vid~~G~  108 (175)
T d1cdoa2          97 GGVDFSLECVGN  108 (175)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCcceeeeecCC
Confidence            579999999985

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.65  E-value=0.0016  Score=52.89  Aligned_cols=37  Identities=30%  Similarity=0.267  Sum_probs=30.1

Q ss_pred             CCCCCE-EEEecCC------------------CcHHHHHHHHHHHCCCeEEEeeCC
Q 024230           17 SLQGMT-ALVTGGT------------------KGLGLAVVEELSMLGATVHTCSRT   53 (270)
Q Consensus        17 ~l~gk~-vlItG~s------------------~giG~~la~~l~~~G~~v~l~~r~   53 (270)
                      .++||+ ||||.|.                  |..|.++|+.|..+|++|+++.+.
T Consensus        14 ~~~g~k~VLITaG~T~epID~~pVR~ItN~SSGk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          14 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             cccCCcEEEEccCCcCcccCCCCceEeCCCCchHHHHHHHHHHHHcCCEEEEEecC
Confidence            345666 7788775                  789999999999999999998643

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.65  E-value=0.011  Score=42.95  Aligned_cols=114  Identities=9%  Similarity=0.030  Sum_probs=66.5

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhc----CCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMK----GLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      .+|.|+|+ |.+|.++|..++..+. +++|++++++..+....++...    +........+..             +.+
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~~-------------~~~   69 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-------------DDL   69 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-------------GGG
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecccc-------------ccc
Confidence            47888895 9999999999888884 7999999887765555444431    233333322211             111


Q ss_pred             CCcccEEEECCCCCCCCCC--CCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEec
Q 024230           96 NGKLNIFVNNVGTSVLKPT--LEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMS  156 (270)
Q Consensus        96 ~~~id~li~~ag~~~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~is  156 (270)
                       ..-|++|.++|.......  .+.+..   +.+..|..    +++.+.+.+.+.. .+.++++|
T Consensus        70 -~~advvvitag~~~~~g~~~~~~~R~---~l~~~N~~----iv~~i~~~i~~~~p~aivivvt  125 (150)
T d1t2da1          70 -AGADVVIVTAGFTKAPGKSDKEWNRD---DLLPLNNK----IMIEIGGHIKKNCPNAFIIVVT  125 (150)
T ss_dssp             -TTCSEEEECCSCSSCTTCCSTTCCGG---GGHHHHHH----HHHHHHHHHHHHCTTSEEEECS
T ss_pred             -CCCcEEEEecccccCCCCCccccchh---HHHHHHHH----HHHHHHHHHHhcCCCeEEEEec
Confidence             468999999997532211  112222   23555543    4444445445544 34455554

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=96.50  E-value=0.0025  Score=47.08  Aligned_cols=45  Identities=24%  Similarity=0.327  Sum_probs=39.5

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELN   58 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~   58 (270)
                      +..+++||+++|.|-|.-+|+-++..|.++|++|.++.+....++
T Consensus        31 y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~   75 (166)
T d1b0aa1          31 YNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLR   75 (166)
T ss_dssp             TTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHH
T ss_pred             cCcccccceEEEEeccccccHHHHHHHHHhhccccccccccchhH
Confidence            467899999999999999999999999999999998876655443

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.49  E-value=0.02  Score=41.96  Aligned_cols=83  Identities=8%  Similarity=0.055  Sum_probs=55.6

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCC--eEEEeeCChhHHHHHHHHHHh------------cCCeEEEEEccCCCHHHHHH
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTETELNECIHHLQM------------KGLKVTGSVCDVSSRPQRQT   86 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~------------~~~~~~~~~~D~~~~~~~~~   86 (270)
                      |+|+|.| .|-+|.++|+.|.+.|+  +|+.++++++.++...+.-.-            ....+.++.   .-.+.+..
T Consensus         2 k~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIila---~p~~~~~~   77 (171)
T d2g5ca2           2 QNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLS---SPVRTFRE   77 (171)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEEC---SCHHHHHH
T ss_pred             CEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhcccccccccc---CCchhhhh
Confidence            5789997 59999999999999996  688899998887665443110            011122111   23567788


Q ss_pred             HHHHHHHHcCCcccEEEECCCC
Q 024230           87 LINTVSSLFNGKLNIFVNNVGT  108 (270)
Q Consensus        87 ~~~~i~~~~~~~id~li~~ag~  108 (270)
                      .++++...+ .+=.+++.+.+.
T Consensus        78 vl~~l~~~~-~~~~ii~d~~s~   98 (171)
T d2g5ca2          78 IAKKLSYIL-SEDATVTDQGSV   98 (171)
T ss_dssp             HHHHHHHHS-CTTCEEEECCSC
T ss_pred             hhhhhhccc-cccccccccccc
Confidence            888888776 444566666554

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=96.44  E-value=0.016  Score=42.70  Aligned_cols=90  Identities=14%  Similarity=0.124  Sum_probs=65.8

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      ..+.-+|+|.|+ |-.|.+-++.....|++|.++|.+.+.++++......   .+.   .-..+++.+.+.+        
T Consensus        29 gv~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~---~~~---~~~~~~~~l~~~~--------   93 (168)
T d1pjca1          29 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS---RVE---LLYSNSAEIETAV--------   93 (168)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG---GSE---EEECCHHHHHHHH--------
T ss_pred             CCCCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcc---cce---eehhhhhhHHHhh--------
Confidence            456788999987 6789999999999999999999999998876665533   222   2345566655555        


Q ss_pred             CcccEEEECCCCCCCCCCCCCCHHH
Q 024230           97 GKLNIFVNNVGTSVLKPTLEYNAED  121 (270)
Q Consensus        97 ~~id~li~~ag~~~~~~~~~~~~~~  121 (270)
                      ...|++|.++-+.......-.+.+.
T Consensus        94 ~~aDivI~aalipG~~aP~lIt~~m  118 (168)
T d1pjca1          94 AEADLLIGAVLVPGRRAPILVPASL  118 (168)
T ss_dssp             HTCSEEEECCCCTTSSCCCCBCHHH
T ss_pred             ccCcEEEEeeecCCcccCeeecHHH
Confidence            4679999999886655544455544

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.43  E-value=0.0044  Score=45.60  Aligned_cols=75  Identities=23%  Similarity=0.256  Sum_probs=53.4

Q ss_pred             cccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           13 QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        13 ~~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      .....|.||+++|.|-. .||+.+|+.+...|++|++++.++...  +.+..  .|-++.       .   +++++    
T Consensus        17 ~t~~~l~Gk~v~V~GyG-~iG~g~A~~~rg~G~~V~v~e~dp~~a--l~A~~--dG~~v~-------~---~~~a~----   77 (163)
T d1li4a1          17 ATDVMIAGKVAVVAGYG-DVGKGCAQALRGFGARVIITEIDPINA--LQAAM--EGYEVT-------T---MDEAC----   77 (163)
T ss_dssp             HHCCCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHH--HHHHH--TTCEEC-------C---HHHHT----
T ss_pred             HhCceecCCEEEEeccc-cccHHHHHHHHhCCCeeEeeecccchh--HHhhc--CceEee-------e---hhhhh----
Confidence            44678999999999864 899999999999999999999987542  22222  232221       1   22222    


Q ss_pred             HHcCCcccEEEECCCCCC
Q 024230           93 SLFNGKLNIFVNNVGTSV  110 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~  110 (270)
                          ..-|++|.+.|...
T Consensus        78 ----~~adivvtaTGn~~   91 (163)
T d1li4a1          78 ----QEGNIFVTTTGCID   91 (163)
T ss_dssp             ----TTCSEEEECSSCSC
T ss_pred             ----hhccEEEecCCCcc
Confidence                56799999998643

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.42  E-value=0.0051  Score=45.61  Aligned_cols=78  Identities=22%  Similarity=0.267  Sum_probs=51.0

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      .|.+|+|.|+ |++|...+..+...|+ .|+.+++++++++..    ++.+... ++  |-. .+.++...+   ...+.
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~----~~~ga~~-~i--~~~-~~~~~~~~~---~~~~~   99 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLA----ERLGADH-VV--DAR-RDPVKQVME---LTRGR   99 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHH----HHTTCSE-EE--ETT-SCHHHHHHH---HTTTC
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHH----hhcccce-ee--cCc-ccHHHHHHH---hhCCC
Confidence            5789999885 9999999999888887 577788888765543    3344332 22  222 233333332   22224


Q ss_pred             cccEEEECCCC
Q 024230           98 KLNIFVNNVGT  108 (270)
Q Consensus        98 ~id~li~~ag~  108 (270)
                      .+|++|.++|.
T Consensus       100 g~d~vid~~g~  110 (172)
T d1h2ba2         100 GVNVAMDFVGS  110 (172)
T ss_dssp             CEEEEEESSCC
T ss_pred             CceEEEEecCc
Confidence            69999999985

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.41  E-value=0.049  Score=38.88  Aligned_cols=109  Identities=10%  Similarity=-0.043  Sum_probs=65.7

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCC--eEEEeeCChhHHHHHHHHHHh----cCCeEEEEE-ccCCCHHHHHHHHHHHHHH
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTETELNECIHHLQM----KGLKVTGSV-CDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~----~~~~~~~~~-~D~~~~~~~~~~~~~i~~~   94 (270)
                      +|.|+|+ |.+|.++|..++.+|.  ++++++.+++..+....+++.    ......... -|..+              
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~~~--------------   66 (142)
T d1ojua1           2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSL--------------   66 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCGGG--------------
T ss_pred             EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCHHH--------------
Confidence            6788896 9999999999999985  699999999876555444543    122222222 22211              


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEec
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMS  156 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~ii~is  156 (270)
                      + ..-|++|..+|.....   ..+.   .+.+..|..    +.+.+.+.+.+.. .+.++++|
T Consensus        67 ~-~~adiVvitag~~~~~---g~~r---~~l~~~n~~----i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1ojua1          67 L-KGSEIIVVTAGLARKP---GMTR---LDLAHKNAG----IIKDIAKKIVENAPESKILVVT  118 (142)
T ss_dssp             G-TTCSEEEECCCCCCCS---SCCH---HHHHHHHHH----HHHHHHHHHHTTSTTCEEEECS
T ss_pred             h-ccccEEEEeccccCCC---CCch---HHHHHHhhH----HHHHHHHHHHhhCCCcEEEEec
Confidence            1 5689999999864322   1233   233444443    4455556556654 34444444

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.39  E-value=0.0024  Score=47.50  Aligned_cols=45  Identities=29%  Similarity=0.386  Sum_probs=40.2

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELN   58 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~   58 (270)
                      +..+++||.++|.|-|.-+|+-++..|+++|+.|.++......+.
T Consensus        33 ~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~   77 (170)
T d1a4ia1          33 TGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD   77 (170)
T ss_dssp             TTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH
T ss_pred             hCcccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHH
Confidence            467899999999999999999999999999999999887665543

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.25  E-value=0.043  Score=39.72  Aligned_cols=80  Identities=11%  Similarity=0.074  Sum_probs=48.0

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCC-------eEEEeeCChh--HHHHHHHHHHhcC-CeEEEEEccCCCHHHHHHHHH
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGA-------TVHTCSRTET--ELNECIHHLQMKG-LKVTGSVCDVSSRPQRQTLIN   89 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~-------~v~l~~r~~~--~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~   89 (270)
                      ..+|.|+||+|.+|.+++..|+..+-       .+++++.++.  .++....++.... .....+..-- +.   ...+ 
T Consensus         3 p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~---~~~~-   77 (154)
T d5mdha1           3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATD-KE---EIAF-   77 (154)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEES-CH---HHHT-
T ss_pred             ceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccCc-cc---cccc-
Confidence            34899999999999999999987652       4677766544  3344333333321 1111111111 11   1122 


Q ss_pred             HHHHHcCCcccEEEECCCCCCC
Q 024230           90 TVSSLFNGKLNIFVNNVGTSVL  111 (270)
Q Consensus        90 ~i~~~~~~~id~li~~ag~~~~  111 (270)
                             ...|++|.++|....
T Consensus        78 -------~~~dvVVitag~~~~   92 (154)
T d5mdha1          78 -------KDLDVAILVGSMPRR   92 (154)
T ss_dssp             -------TTCSEEEECCSCCCC
T ss_pred             -------CCceEEEEecccCCC
Confidence                   578999999998643

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=96.05  E-value=0.0033  Score=46.07  Aligned_cols=36  Identities=25%  Similarity=0.244  Sum_probs=32.4

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHH
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETEL   57 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~   57 (270)
                      ++|+|.|+ |.+|..++..|++.|++|.+++|+++..
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~   36 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPY   36 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSE
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHh
Confidence            47899988 9999999999999999999999987643

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.04  E-value=0.037  Score=40.30  Aligned_cols=86  Identities=6%  Similarity=0.007  Sum_probs=55.1

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHH-------hcCCeEEEEEccCCCHHHHHHHHHH---
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQ-------MKGLKVTGSVCDVSSRPQRQTLINT---   90 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~-------~~~~~~~~~~~D~~~~~~~~~~~~~---   90 (270)
                      ++|.|.| .|-+|.++|+.|+++|++|.+++|+++..+++...-.       +.-....++...+.+.+.++.++..   
T Consensus         2 ~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~~   80 (162)
T d3cuma2           2 KQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDG   80 (162)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTTC
T ss_pred             CEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhcccc
Confidence            3577774 5899999999999999999999999887665442211       0011233455566677777766644   


Q ss_pred             HHHHcCCcccEEEECCCC
Q 024230           91 VSSLFNGKLNIFVNNVGT  108 (270)
Q Consensus        91 i~~~~~~~id~li~~ag~  108 (270)
                      +.... .+=+++|.+.-.
T Consensus        81 ~~~~l-~~g~iiid~st~   97 (162)
T d3cuma2          81 LLAHI-APGTLVLECSTI   97 (162)
T ss_dssp             HHHHS-CTTCEEEECSCC
T ss_pred             ccccC-CCCCEEEECCCC
Confidence            33333 233566666544

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=95.88  E-value=0.022  Score=44.31  Aligned_cols=73  Identities=16%  Similarity=0.231  Sum_probs=53.9

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      ..+|+||+|+|-|- |.+|..+|+.|.+.|++|+.++.+.....+...+.   +...       .+.+          +.
T Consensus        34 ~~~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~---g~~~-------~~~~----------~~   92 (230)
T d1leha1          34 SDSLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE---GADA-------VAPN----------AI   92 (230)
T ss_dssp             SCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CCEE-------CCGG----------GT
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhc---CCcc-------cCCc----------cc
Confidence            35799999999986 78999999999999999999999887776655432   3221       1111          11


Q ss_pred             cCCcccEEEECCCC
Q 024230           95 FNGKLNIFVNNVGT  108 (270)
Q Consensus        95 ~~~~id~li~~ag~  108 (270)
                      +.-+.|+++=||-.
T Consensus        93 ~~~~cDIl~PcA~~  106 (230)
T d1leha1          93 YGVTCDIFAPCALG  106 (230)
T ss_dssp             TTCCCSEEEECSCS
T ss_pred             ccccccEecccccc
Confidence            22578999999865

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.80  E-value=0.028  Score=38.52  Aligned_cols=35  Identities=17%  Similarity=0.275  Sum_probs=30.9

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChh
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTET   55 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~   55 (270)
                      .|+++|.|| |-+|..+|..|++.|.+|.++.|.+.
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            478888887 79999999999999999999988654

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.79  E-value=0.036  Score=43.02  Aligned_cols=76  Identities=17%  Similarity=0.067  Sum_probs=59.6

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      .-++|+||=.|+++|   .++..|+++|++|+.++.+++-++.+.+.+...+.++.+...|+.+.+            ++
T Consensus        39 ~~~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l~------------~~  103 (251)
T d1wzna1          39 KREVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIA------------FK  103 (251)
T ss_dssp             SSCCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCC------------CC
T ss_pred             CCCCCEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccccccchheehhhhhcc------------cc
Confidence            335679999999887   456678899999999999998888887777777778889999986532            23


Q ss_pred             CcccEEEECCC
Q 024230           97 GKLNIFVNNVG  107 (270)
Q Consensus        97 ~~id~li~~ag  107 (270)
                      ++.|.+++.-+
T Consensus       104 ~~fD~I~~~~~  114 (251)
T d1wzna1         104 NEFDAVTMFFS  114 (251)
T ss_dssp             SCEEEEEECSS
T ss_pred             cccchHhhhhh
Confidence            57898887643

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=95.78  E-value=0.027  Score=40.14  Aligned_cols=86  Identities=10%  Similarity=-0.014  Sum_probs=54.0

Q ss_pred             CCCEEEEecCC---CcHHHHHHHHHHHCCCeEEEeeCChhHHH--HHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           19 QGMTALVTGGT---KGLGLAVVEELSMLGATVHTCSRTETELN--ECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        19 ~gk~vlItG~s---~giG~~la~~l~~~G~~v~l~~r~~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      +.|+|.|+|+|   +..|..+.+.|.+.|++|+.+..+.....  .....+.+....+..+.. ...++.+.++++++.+
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dlp~~iD~v~i-~vp~~~~~~~~~e~~~   96 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDL-FVKPKLTMEYVEQAIK   96 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSCCSEEEE-CSCHHHHHHHHHHHHH
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccccCccceEEEE-EeCHHHHHHHHHHHHH
Confidence            67999999999   67999999999999999999976543211  111112111111111111 1346667777777766


Q ss_pred             HcCCcccEEEECCCC
Q 024230           94 LFNGKLNIFVNNVGT  108 (270)
Q Consensus        94 ~~~~~id~li~~ag~  108 (270)
                      .   .+..++...|.
T Consensus        97 ~---g~k~v~~~~G~  108 (139)
T d2d59a1          97 K---GAKVVWFQYNT  108 (139)
T ss_dssp             H---TCSEEEECTTC
T ss_pred             h---CCCEEEEeccc
Confidence            4   35677776664

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.70  E-value=0.0088  Score=44.38  Aligned_cols=40  Identities=23%  Similarity=0.211  Sum_probs=36.6

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCC
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRT   53 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~   53 (270)
                      ...+++||.++|.|-|.=+|+-+|..|+++|+.|..+..+
T Consensus        23 ~g~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~   62 (171)
T d1edza1          23 EGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN   62 (171)
T ss_dssp             TTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred             ccCCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccc
Confidence            4569999999999999999999999999999999888754

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.64  E-value=0.048  Score=41.29  Aligned_cols=78  Identities=22%  Similarity=0.223  Sum_probs=60.6

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      ..+++|++||=.|+++|.   ++..++.+|+ +|+.++.+++..+.+.+.++..+.+..++..|..+             
T Consensus        42 ~~dl~g~~vLDlg~GtG~---l~i~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~~~~~~~~~~d~~~-------------  105 (201)
T d1wy7a1          42 LGDIEGKVVADLGAGTGV---LSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSE-------------  105 (201)
T ss_dssp             TTSSTTCEEEEETCTTCH---HHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGG-------------
T ss_pred             cCCCCCCEEEECcCcchH---HHHHHHHcCCCEEEEEcCcHHHHHHHHHHHHHcCCCceEEECchhh-------------
Confidence            357899999988887773   3334557786 79999999998888888888888888888888643             


Q ss_pred             HcCCcccEEEECCCCC
Q 024230           94 LFNGKLNIFVNNVGTS  109 (270)
Q Consensus        94 ~~~~~id~li~~ag~~  109 (270)
                       +.+++|++|.|.-+.
T Consensus       106 -~~~~fD~Vi~nPP~~  120 (201)
T d1wy7a1         106 -FNSRVDIVIMNPPFG  120 (201)
T ss_dssp             -CCCCCSEEEECCCCS
T ss_pred             -hCCcCcEEEEcCccc
Confidence             236899999987653

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=95.60  E-value=0.03  Score=38.52  Aligned_cols=34  Identities=12%  Similarity=0.197  Sum_probs=30.0

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTE   54 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~   54 (270)
                      .|+++|.|| |.+|.++|..|++.|.+|.++.|.+
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            478888876 7899999999999999999998854

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=95.60  E-value=0.037  Score=38.28  Aligned_cols=36  Identities=19%  Similarity=0.293  Sum_probs=31.4

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChh
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTET   55 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~   55 (270)
                      .+|+++|.|| |.+|.++|..|+++|.+|.++.+.+.
T Consensus        29 ~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          29 PQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence            3688888876 79999999999999999999988654

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=95.56  E-value=0.019  Score=44.75  Aligned_cols=77  Identities=18%  Similarity=0.129  Sum_probs=61.6

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      ...++++||=.|++.|.   ++..|+++|.+|+.++.+++.++.+.+.+...+.++.++..|+.+.+            +
T Consensus        34 ~~~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~~------------~   98 (246)
T d1y8ca_          34 NNLVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLN------------I   98 (246)
T ss_dssp             TTCCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCC------------C
T ss_pred             hCCCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccccCccceeeccchhhhc------------c
Confidence            35678999999999886   78899999999999999999888777777777778888888886531            1


Q ss_pred             CCcccEEEECCC
Q 024230           96 NGKLNIFVNNVG  107 (270)
Q Consensus        96 ~~~id~li~~ag  107 (270)
                      .+++|++++..+
T Consensus        99 ~~~fD~i~~~~~  110 (246)
T d1y8ca_          99 NRKFDLITCCLD  110 (246)
T ss_dssp             SCCEEEEEECTT
T ss_pred             cccccccceeee
Confidence            267999887544

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.56  E-value=0.03  Score=38.80  Aligned_cols=35  Identities=23%  Similarity=0.252  Sum_probs=30.8

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChh
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTET   55 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~   55 (270)
                      .|+++|.|| |-||..+|..|++.|.+|.++.+.+.
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~   57 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQ   57 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEeccc
Confidence            578888887 68999999999999999999988653

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=95.56  E-value=0.02  Score=42.79  Aligned_cols=39  Identities=36%  Similarity=0.352  Sum_probs=35.0

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChh
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTET   55 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~   55 (270)
                      ..++||++.|.|.+. ||+.+++.+...|.+|+.++|++.
T Consensus        38 ~~l~gk~vgIiG~G~-IG~~va~~l~~~g~~v~~~d~~~~   76 (181)
T d1qp8a1          38 PLIQGEKVAVLGLGE-IGTRVGKILAALGAQVRGFSRTPK   76 (181)
T ss_dssp             CCCTTCEEEEESCST-HHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             CcccCceEEEecccc-ccccceeeeecccccccccccccc
Confidence            359999999999865 999999999999999999998754

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=95.46  E-value=0.016  Score=43.78  Aligned_cols=83  Identities=18%  Similarity=0.102  Sum_probs=62.7

Q ss_pred             CCCEEE-EecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           19 QGMTAL-VTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        19 ~gk~vl-ItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      .|.+++ +|-|+||...++.+.+ . +.+|+.++++++.++...+.+...+.++.++..+..+...+   ++.   ...+
T Consensus        23 ~~~~~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~~---~~~---~~~~   94 (192)
T d1m6ya2          23 DEKIILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFL---LKT---LGIE   94 (192)
T ss_dssp             TTCEEEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHH---HHH---TTCS
T ss_pred             CCCEEEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccccccccchhHHHhhHHHH---HHH---cCCC
Confidence            344444 7888888888888876 3 46899999999999888888887788899999998875442   221   1116


Q ss_pred             cccEEEECCCCC
Q 024230           98 KLNIFVNNVGTS  109 (270)
Q Consensus        98 ~id~li~~ag~~  109 (270)
                      ++|.++.-.|+.
T Consensus        95 ~vdgIl~DlGvS  106 (192)
T d1m6ya2          95 KVDGILMDLGVS  106 (192)
T ss_dssp             CEEEEEEECSCC
T ss_pred             Ccceeeeccchh
Confidence            899999998874

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=95.46  E-value=0.015  Score=42.05  Aligned_cols=41  Identities=17%  Similarity=0.204  Sum_probs=34.8

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCC-CeEEEeeCChhHHHHHHHH
Q 024230           22 TALVTGGTKGLGLAVVEELSMLG-ATVHTCSRTETELNECIHH   63 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G-~~v~l~~r~~~~~~~~~~~   63 (270)
                      +|.+.|+ |-+|.++++.|.+.| ++|.+++|++++.+++.++
T Consensus         2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~   43 (152)
T d1yqga2           2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKE   43 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHH
T ss_pred             EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhh
Confidence            5777766 999999999999988 8899999999888776553

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.45  E-value=0.078  Score=36.06  Aligned_cols=76  Identities=16%  Similarity=0.153  Sum_probs=55.8

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .....+.+|.|.| +|-+|+-++....+.|+++++++.+++....        ...-.++..|..|.+.+.++....   
T Consensus         6 ~~~~~~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~--------~va~~~i~~~~~d~~~l~~~~~~~---   73 (111)
T d1kjqa2           6 ALRPAATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAM--------HVAHRSHVINMLDGDALRRVVELE---   73 (111)
T ss_dssp             TTSTTCCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGG--------GGSSEEEECCTTCHHHHHHHHHHH---
T ss_pred             CCCCCCCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchh--------hcCCeEEECCCCCHHHHHHHHHhh---
Confidence            3445566899999 5789999999999999999999988764321        112345678999998888877542   


Q ss_pred             cCCcccEEEEC
Q 024230           95 FNGKLNIFVNN  105 (270)
Q Consensus        95 ~~~~id~li~~  105 (270)
                         .+|++-+-
T Consensus        74 ---~~DviT~E   81 (111)
T d1kjqa2          74 ---KPHYIVPE   81 (111)
T ss_dssp             ---CCSEEEEC
T ss_pred             ---CCceEEEE
Confidence               57887553

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=95.37  E-value=0.039  Score=37.83  Aligned_cols=34  Identities=21%  Similarity=0.234  Sum_probs=29.7

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTE   54 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~   54 (270)
                      .|+++|.|| |-+|.++|..|++.|.+|.++.|.+
T Consensus        21 p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          21 PERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEECC-ChhhHHHHHHhhccccEEEEEeecc
Confidence            377888776 7999999999999999999998865

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=95.32  E-value=0.029  Score=43.92  Aligned_cols=36  Identities=25%  Similarity=0.357  Sum_probs=31.9

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCC
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRT   53 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~   53 (270)
                      .|++++|+|.| .||+|..++..|++.|. +++++|.+
T Consensus        27 kL~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D   63 (247)
T d1jw9b_          27 ALKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFD   63 (247)
T ss_dssp             HHHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             HHhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCc
Confidence            48889999999 68899999999999997 68888764

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=95.22  E-value=0.21  Score=36.56  Aligned_cols=46  Identities=20%  Similarity=0.101  Sum_probs=38.9

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHh
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQM   66 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~   66 (270)
                      .+|++||..|.+.|   ..+..|+++|++|+.++.+++..+...+.+..
T Consensus        19 ~~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~   64 (201)
T d1pjza_          19 VPGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGE   64 (201)
T ss_dssp             CTTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCS
T ss_pred             CCCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhcc
Confidence            46889999999887   47779999999999999999998877766543

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=95.18  E-value=0.072  Score=39.19  Aligned_cols=40  Identities=20%  Similarity=0.218  Sum_probs=34.2

Q ss_pred             EEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHH
Q 024230           23 ALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHH   63 (270)
Q Consensus        23 vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~   63 (270)
                      |-|+ |.|-+|..+|+.|+++|++|.+++|++++.+.+.++
T Consensus         4 IGvI-GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~   43 (178)
T d1pgja2           4 VGVV-GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKA   43 (178)
T ss_dssp             EEEE-CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred             EEEE-eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc
Confidence            4444 568999999999999999999999999988877654

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.12  E-value=0.015  Score=44.12  Aligned_cols=41  Identities=17%  Similarity=0.171  Sum_probs=36.3

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETE   56 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~   56 (270)
                      +.+|.||++.|.|- |.||+.+|+.+...|.+|+.+++....
T Consensus        38 g~el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~~   78 (197)
T d1j4aa1          38 GREVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRNP   78 (197)
T ss_dssp             BCCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCH
T ss_pred             CccccCCeEEEecc-cccchhHHHhHhhhcccccccCccccc
Confidence            45799999999986 789999999999999999999876554

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=95.07  E-value=0.075  Score=36.47  Aligned_cols=37  Identities=22%  Similarity=0.144  Sum_probs=31.7

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTE   54 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~   54 (270)
                      +-..|+++|.|| |-||..+|..|++.|.+|.++.+++
T Consensus        19 ~~~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          19 QNVPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             SSCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             ccCCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence            344588999987 7999999999999999999998764

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.03  E-value=0.06  Score=37.22  Aligned_cols=37  Identities=16%  Similarity=0.234  Sum_probs=31.9

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTE   54 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~   54 (270)
                      +-++|+++|.|| |.+|..+|..|++.|.+|.++.+.+
T Consensus        27 ~~~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          27 DPEVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             CTTCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             ccCCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence            446789998865 7999999999999999999998764

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.99  E-value=0.18  Score=37.85  Aligned_cols=59  Identities=15%  Similarity=-0.016  Sum_probs=48.1

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSS   80 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~   80 (270)
                      ++.+||=.|+++|.   ++..|++.|++|+.++.+++.++...+.+...+..+..+..|..+
T Consensus        37 ~~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~   95 (226)
T d1ve3a1          37 KRGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARK   95 (226)
T ss_dssp             SCCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTS
T ss_pred             CCCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhcccccccccccccccc
Confidence            45689999999877   667889999999999999998888777776666677777777765

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=94.98  E-value=0.035  Score=40.00  Aligned_cols=37  Identities=19%  Similarity=0.211  Sum_probs=30.1

Q ss_pred             CCCEEEEe-cCCCcHHHHHHHHHHHCCCeEEEeeCChh
Q 024230           19 QGMTALVT-GGTKGLGLAVVEELSMLGATVHTCSRTET   55 (270)
Q Consensus        19 ~gk~vlIt-G~s~giG~~la~~l~~~G~~v~l~~r~~~   55 (270)
                      .++.++|. .+++.||.++|..|+++|.+|.++.+.+.
T Consensus        38 ~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          38 IGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             CCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             cCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            34555554 57799999999999999999999988754

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=94.98  E-value=0.05  Score=37.11  Aligned_cols=34  Identities=29%  Similarity=0.354  Sum_probs=29.6

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTE   54 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~   54 (270)
                      +|+++|.|| |.+|..+|..|++.|.+|.++.+.+
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeec
Confidence            478888765 7999999999999999999998854

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=94.91  E-value=0.021  Score=39.96  Aligned_cols=71  Identities=13%  Similarity=0.063  Sum_probs=50.6

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      |-++|.|. |.+|+.+++.|  +|..|++++.+++..+..    ...  .+.++..|.++++.++++-      . .+.+
T Consensus         1 kHivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~----~~~--~~~~i~Gd~~~~~~L~~a~------i-~~A~   64 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLREL--RGSEVFVLAEDENVRKKV----LRS--GANFVHGDPTRVSDLEKAN------V-RGAR   64 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTS--CGGGEEEEESCTTHHHHH----HHT--TCEEEESCTTSHHHHHHTT------C-TTCS
T ss_pred             CEEEEECC-CHHHHHHHHHH--cCCCCEEEEcchHHHHHH----Hhc--CccccccccCCHHHHHHhh------h-hcCc
Confidence            45778874 88999999999  466788888888876543    333  3567789999987765533      1 5678


Q ss_pred             EEEECCC
Q 024230          101 IFVNNVG  107 (270)
Q Consensus       101 ~li~~ag  107 (270)
                      .+|.+..
T Consensus        65 ~vi~~~~   71 (129)
T d2fy8a1          65 AVIVNLE   71 (129)
T ss_dssp             EEEECCS
T ss_pred             EEEEecc
Confidence            8886553

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=94.90  E-value=0.023  Score=42.97  Aligned_cols=41  Identities=20%  Similarity=0.142  Sum_probs=36.3

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhH
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETE   56 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~   56 (270)
                      ..+|.||++.|.|. |.||+.+|+.+...|.+|+.+++....
T Consensus        44 ~~eL~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~   84 (193)
T d1mx3a1          44 AARIRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLSD   84 (193)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCT
T ss_pred             ceeeeCceEEEecc-ccccccceeeeeccccceeeccCcccc
Confidence            56899999999965 899999999999999999999986553

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=94.89  E-value=0.025  Score=39.69  Aligned_cols=73  Identities=14%  Similarity=0.139  Sum_probs=54.2

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCCeEEE-eeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGATVHT-CSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~~v~l-~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      +|.|.|++|..|+.+++.+.++|++++. ++++....      +  ...+   +..|++.++...+.++.+.+.   ++-
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~~------~--~~~D---VvIDFS~p~~~~~~l~~~~~~---~~p   67 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVEE------L--DSPD---VVIDFSSPEALPKTVDLCKKY---RAG   67 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEEE------C--SCCS---EEEECSCGGGHHHHHHHHHHH---TCE
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHHH------h--ccCC---EEEEecCHHHHHHHHHHHHhc---CCC
Confidence            6999999999999999999999998654 45443211      1  1223   346999999999999888765   455


Q ss_pred             EEEECCCC
Q 024230          101 IFVNNVGT  108 (270)
Q Consensus       101 ~li~~ag~  108 (270)
                      +++-..|.
T Consensus        68 ~ViGTTG~   75 (128)
T d1vm6a3          68 LVLGTTAL   75 (128)
T ss_dssp             EEECCCSC
T ss_pred             EEEEcCCC
Confidence            77777775

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=94.87  E-value=0.013  Score=44.25  Aligned_cols=40  Identities=25%  Similarity=0.174  Sum_probs=33.9

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHH
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECI   61 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~   61 (270)
                      ++|.|.|+ |..|.++|..|++.|++|.+++|+++..+.+.
T Consensus         8 ~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~   47 (189)
T d1n1ea2           8 NKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVN   47 (189)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHH
T ss_pred             ceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHh
Confidence            36888887 56999999999999999999999988766544

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.83  E-value=0.064  Score=37.19  Aligned_cols=34  Identities=18%  Similarity=0.259  Sum_probs=30.3

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTE   54 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~   54 (270)
                      .|+++|.||+ .||..+|..|++.|.+|.++.|++
T Consensus        22 pk~vvIvGgG-~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGAG-YIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEEcCC-ccHHHHHHHHhcCCcEEEEEeecc
Confidence            4889999885 799999999999999999998864

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.70  E-value=0.059  Score=37.23  Aligned_cols=33  Identities=24%  Similarity=0.255  Sum_probs=28.8

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCC
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRT   53 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~   53 (270)
                      .|+++|+|| |-||.++|..|.+.|.+|.++.|+
T Consensus        20 P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          20 PGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            367888876 799999999999999999999875

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=94.62  E-value=0.063  Score=37.01  Aligned_cols=34  Identities=26%  Similarity=0.372  Sum_probs=29.8

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTE   54 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~   54 (270)
                      +|+++|.|| |.+|.++|..|++.|.+|.++.|.+
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence            477888776 7999999999999999999998864

>d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=94.59  E-value=0.41  Score=35.74  Aligned_cols=143  Identities=15%  Similarity=0.094  Sum_probs=78.6

Q ss_pred             CCCCCEEEEecCC--CcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           17 SLQGMTALVTGGT--KGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        17 ~l~gk~vlItG~s--~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      ...|+++++....  ......++..|.+.|..++.+.-..+.                       +.+.   +.+.+ ..
T Consensus        22 ~~~g~~lv~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~-----------------------~~~~---l~~~~-~~   74 (209)
T d2fr1a2          22 RLDGTWLVAKYAGTADETSTAAREALESAGARVRELVVDARC-----------------------GRDE---LAERL-RS   74 (209)
T ss_dssp             CCCSEEEEEECTTSSHHHHHHHHHHHHTTSCEEEEEECCTTC-----------------------CHHH---HHHHH-TT
T ss_pred             CCCCcEEEEeCCCCchHHHHHHHHHHHhCCCeEEEecCCCcc-----------------------CHHH---HHHHh-hc
Confidence            3455555555332  346777888888888887766443221                       1222   22222 12


Q ss_pred             cCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEecCccccccCCCChhhhhhH
Q 024230           95 FNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATK  174 (270)
Q Consensus        95 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~y~~sK  174 (270)
                      . +.++.+||..+......-. .+.      ....+...+.++|++.   ......++.+++..... .......-....
T Consensus        75 ~-~~~~~vv~l~~~~~~~~~~-~~~------~~~~~~~~l~l~qal~---~~~~~~~l~~vT~~a~~-~~~~d~~~~p~~  142 (209)
T d2fr1a2          75 V-GEVAGVLSLLAVDEAEPEE-APL------ALASLADTLSLVQAMV---SAELGCPLWTVTESAVA-TGPFERVRNAAH  142 (209)
T ss_dssp             S-CCCSEEEECTTTTCCCCSS-CGG------GCHHHHHHHHHHHHHH---HTTCCCCEEEEEESCSC-SSTTSCCSCGGG
T ss_pred             c-CCCCeEEEeCCCCCCCCcc-hhH------HHHHHHHHHHHHHHHH---hCCCCCcEEEEEcCCcc-cCCCcccCCHhH
Confidence            2 5788889887654322111 110      1123556666777764   23333556666543221 222223345678


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEE
Q 024230          175 GAMNQLAKNLACEWAKDNIRTNSV  198 (270)
Q Consensus       175 aal~~~~~sla~el~~~~i~v~~v  198 (270)
                      +++-+|+|+++.|+....++...+
T Consensus       143 A~l~Gl~r~~~~E~P~l~~~~vDl  166 (209)
T d2fr1a2         143 GALWGVGRVIALENPAVWGGLVDV  166 (209)
T ss_dssp             HHHHHHHHHHHHHCGGGEEEEEEE
T ss_pred             HhHHHHHHHHHHhCCCceEEEEEC
Confidence            999999999999987644555544

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.58  E-value=0.014  Score=43.52  Aligned_cols=42  Identities=17%  Similarity=0.188  Sum_probs=32.7

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHh
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQM   66 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~   66 (270)
                      +|.|.|+ |..|.++|..|+++|++|.+++|..+.  +..+.+..
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~--~~~~~i~~   43 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDT--EILKSISA   43 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGH--HHHHHHHT
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccH--HHHHHHhh
Confidence            5778877 789999999999999999999986553  23344443

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=94.58  E-value=0.099  Score=35.71  Aligned_cols=38  Identities=24%  Similarity=0.199  Sum_probs=32.3

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChh
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTET   55 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~   55 (270)
                      ...+|+++|.|| |-+|..+|..|++.|.+|.++.|.+.
T Consensus        19 ~~~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          19 YEPGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             SCCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             hCCCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence            345789988876 79999999999999999999988653

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=94.45  E-value=0.12  Score=39.49  Aligned_cols=78  Identities=21%  Similarity=0.273  Sum_probs=60.7

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcC-CeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG-LKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      +|.+||.+|+++|.-.++..++.  |.+|+.+.++++-.+...+.+...+ .++.++..|..+-         +..  .+
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g---------~~~--~~  144 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKG---------FPP--KA  144 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC---------CGG--GC
T ss_pred             ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccC---------Ccc--cC
Confidence            56799999999999999888776  5679999999887777777777765 6788899987641         011  16


Q ss_pred             cccEEEECCCCC
Q 024230           98 KLNIFVNNVGTS  109 (270)
Q Consensus        98 ~id~li~~ag~~  109 (270)
                      +.|.++.+++..
T Consensus       145 pfD~Iiv~~a~~  156 (215)
T d1jg1a_         145 PYDVIIVTAGAP  156 (215)
T ss_dssp             CEEEEEECSBBS
T ss_pred             cceeEEeecccc
Confidence            899999888764

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=94.42  E-value=0.02  Score=45.16  Aligned_cols=34  Identities=24%  Similarity=0.242  Sum_probs=29.7

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTE   54 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~   54 (270)
                      +|+|+|+|| |--|...|.+|+++|++|.++.+++
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            689999976 5778999999999999999998754

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=94.41  E-value=0.037  Score=41.47  Aligned_cols=42  Identities=21%  Similarity=0.362  Sum_probs=36.4

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETE   56 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~   56 (270)
                      ...++.|+++.|.| .|.||+++++.+...|.+|+.+++....
T Consensus        38 ~~~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~   79 (188)
T d2naca1          38 HAYDLEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLP   79 (188)
T ss_dssp             TCCCCTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCC
T ss_pred             cceeccccceeecc-ccccchhhhhhhhccCceEEEEeecccc
Confidence            35689999999998 4789999999999999999999986543

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=94.41  E-value=0.072  Score=36.79  Aligned_cols=36  Identities=17%  Similarity=0.185  Sum_probs=31.2

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChh
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTET   55 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~   55 (270)
                      -.|+++|.|| |-||..+|..|++.|.+|.++.|.+.
T Consensus        24 ~p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          24 IPKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             CCSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             cCCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEccc
Confidence            3578888886 79999999999999999999988654

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=94.39  E-value=0.59  Score=33.87  Aligned_cols=117  Identities=5%  Similarity=0.032  Sum_probs=62.5

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHC-----CCeEEEeeCChhHHHHHHHHHHhc----CCeEEEEEccCCCHHHHHHHHHHH
Q 024230           21 MTALVTGGTKGLGLAVVEELSML-----GATVHTCSRTETELNECIHHLQMK----GLKVTGSVCDVSSRPQRQTLINTV   91 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~-----G~~v~l~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~i   91 (270)
                      -+|.|.||++.....+...++..     +.+|+|++.++++++.....++..    +.........  |   ..+.+   
T Consensus         4 ~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~~--d---~~eal---   75 (167)
T d1u8xx1           4 FSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATT--D---PEEAF---   75 (167)
T ss_dssp             EEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEES--C---HHHHH---
T ss_pred             ceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEecC--C---hhhcc---
Confidence            46778888664333344444432     247999999999886544444332    2222222111  2   12233   


Q ss_pred             HHHcCCcccEEEECCCCCCCCCCCCCCHHHHHHHHHHhh----------------HHHHHHHHHHHHHHHhcCC-cEEEE
Q 024230           92 SSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNF----------------ESAFHLCQLAHPLLRASGA-ASIVL  154 (270)
Q Consensus        92 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~----------------~~~~~l~~~~~~~m~~~~~-g~ii~  154 (270)
                           ..-|++|+.+|....      ...+-++.+..|+                .-..-+++-+.+.+++... +-+++
T Consensus        76 -----~~AD~Vvitag~~~~------~g~~rd~~i~~~~Gi~~~~t~g~gg~~~~~r~i~ii~~i~~~i~~~~P~A~li~  144 (167)
T d1u8xx1          76 -----TDVDFVMAHIRVGKY------AMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLN  144 (167)
T ss_dssp             -----SSCSEEEECCCTTHH------HHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred             -----CCCCEEEECCCcCCC------CceeHHHhhchhcCceeeccccCcchheehhhHHHHHHHHHHHHhhCCCeEEEE
Confidence                 578999999997432      1222333444442                2233455566666666543 45555


Q ss_pred             ec
Q 024230          155 MS  156 (270)
Q Consensus       155 is  156 (270)
                      +|
T Consensus       145 ~T  146 (167)
T d1u8xx1         145 YS  146 (167)
T ss_dssp             CC
T ss_pred             eC
Confidence            54

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.37  E-value=0.019  Score=48.93  Aligned_cols=36  Identities=28%  Similarity=0.483  Sum_probs=31.4

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCC
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRT   53 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~   53 (270)
                      .|++.+|||+|+ ||+|..+++.|+..|. ++.++|.+
T Consensus        34 ~l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D   70 (426)
T d1yovb1          34 LLDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMD   70 (426)
T ss_dssp             HHHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCC
T ss_pred             HHhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECC
Confidence            367789999999 6799999999999998 69999774

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=94.33  E-value=0.32  Score=36.02  Aligned_cols=61  Identities=15%  Similarity=0.151  Sum_probs=47.4

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCC-eEEEEEccCCC
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGL-KVTGSVCDVSS   80 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~   80 (270)
                      .+++++||=.|++.|.   .+..|+++|++|+.++.+++.++.........+. .+.+...|+.+
T Consensus        28 ~~~~grvLDiGcG~G~---~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~   89 (198)
T d2i6ga1          28 VVAPGRTLDLGCGNGR---NSLYLAANGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNT   89 (198)
T ss_dssp             TSCSCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTT
T ss_pred             cCCCCcEEEECCCCCH---HHHHHHHHhhhhccccCcHHHHHHHHHHhhhccccchhhhheeccc
Confidence            4567799999997554   5678899999999999999988887776666553 46777777764

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=94.33  E-value=0.12  Score=41.87  Aligned_cols=82  Identities=15%  Similarity=0.155  Sum_probs=56.9

Q ss_pred             CCCCCEEEEecCCCc-HHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcC-CeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           17 SLQGMTALVTGGTKG-LGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG-LKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        17 ~l~gk~vlItG~s~g-iG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      ..+|++||=.++..| ++.+    ++..|.+|+.++.+++.++...+.++..+ .++.++..|..+      ..+.+...
T Consensus       143 ~~~g~rVLDl~~gtG~~s~~----~a~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~------~~~~~~~~  212 (318)
T d1wxxa2         143 RFRGERALDVFSYAGGFALH----LALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFD------LLRRLEKE  212 (318)
T ss_dssp             GCCEEEEEEETCTTTHHHHH----HHHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHH------HHHHHHHT
T ss_pred             HhCCCeeeccCCCCcHHHHH----HHhcCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHH------HhhhhHhh
Confidence            468999996665544 4333    44556789999999999998888888777 357788887654      22333222


Q ss_pred             cCCcccEEEECCCCC
Q 024230           95 FNGKLNIFVNNVGTS  109 (270)
Q Consensus        95 ~~~~id~li~~ag~~  109 (270)
                       +.++|.+|.++-..
T Consensus       213 -~~~fD~Vi~DpP~~  226 (318)
T d1wxxa2         213 -GERFDLVVLDPPAF  226 (318)
T ss_dssp             -TCCEEEEEECCCCS
T ss_pred             -hcCCCEEEEcCCcc
Confidence             25899999987543

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=94.30  E-value=0.033  Score=43.00  Aligned_cols=35  Identities=26%  Similarity=0.285  Sum_probs=30.1

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTE   54 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~   54 (270)
                      ..|+|+|+|| |-.|.++|..|+++|++|.+++|..
T Consensus         5 ~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           5 SQKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4467888887 6889999999999999999999854

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=94.28  E-value=0.13  Score=38.18  Aligned_cols=96  Identities=18%  Similarity=0.113  Sum_probs=59.4

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCH---------------
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSR---------------   81 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---------------   81 (270)
                      .++.-+|+|.|+ |-.|.+-++-....|++|.++|.+.+.++++..    .+.+..  ..+..+.               
T Consensus        26 ~V~pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~----l~~~~i--~~~~~~~~~~~~~~gyA~~~s~   98 (183)
T d1l7da1          26 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVES----LGGKFI--TVDDEAMKTAETAGGYAKEMGE   98 (183)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH----TTCEEC--CC--------------------
T ss_pred             CcCCcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHH----hhcceE--EEeccccccccccccchhhcCH
Confidence            445568888887 678999999999999999999999988766443    332221  1111111               


Q ss_pred             HHHHHHHHHHHHHcCCcccEEEECCCCCCCCCCCCCCHH
Q 024230           82 PQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAE  120 (270)
Q Consensus        82 ~~~~~~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~  120 (270)
                      +..+..-+.+.+.. .+-|++|..+-+.......-.+.+
T Consensus        99 ~~~~~~~~~l~~~l-~~aDlVI~talipG~~aP~lit~~  136 (183)
T d1l7da1          99 EFRKKQAEAVLKEL-VKTDIAITTALIPGKPAPVLITEE  136 (183)
T ss_dssp             ---CCHHHHHHHHH-TTCSEEEECCCCTTSCCCCCSCHH
T ss_pred             HHHHHHHHHHHHHH-HhhhhheeeeecCCcccceeehHH
Confidence            11122233344444 578999999987655443444544

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=94.18  E-value=0.048  Score=39.28  Aligned_cols=42  Identities=12%  Similarity=0.126  Sum_probs=35.0

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHH
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHL   64 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~   64 (270)
                      ++.|. |+|-+|.++++.|.+.|+++++++|+.++.+++.++.
T Consensus         2 kIg~I-G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~   43 (152)
T d2ahra2           2 KIGII-GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL   43 (152)
T ss_dssp             EEEEE-CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred             EEEEE-eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence            35566 5689999999999999999999999998877765544

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=94.18  E-value=0.051  Score=40.39  Aligned_cols=38  Identities=21%  Similarity=0.158  Sum_probs=33.7

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTE   54 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~   54 (270)
                      ...++|+|+|+|| |--|.+.|..|+++|++|.++.+++
T Consensus        39 ~~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          39 PAVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             SCSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccC
Confidence            4567899999997 6889999999999999999999865

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=94.13  E-value=0.12  Score=36.08  Aligned_cols=36  Identities=19%  Similarity=0.193  Sum_probs=31.5

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChh
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTET   55 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~   55 (270)
                      .+|+++|.|| |-+|.++|..|++.|.+|.++.+.+.
T Consensus        34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeeccc
Confidence            4788999865 79999999999999999999988654

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=94.12  E-value=0.013  Score=44.52  Aligned_cols=31  Identities=16%  Similarity=0.217  Sum_probs=28.8

Q ss_pred             CEEEEecCCCcHHHH-----HHHHHHHCCCeEEEee
Q 024230           21 MTALVTGGTKGLGLA-----VVEELSMLGATVHTCS   51 (270)
Q Consensus        21 k~vlItG~s~giG~~-----la~~l~~~G~~v~l~~   51 (270)
                      |++.|||.++|+|+.     +|..|+++|++|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            799999999999996     8999999999999986

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.08  E-value=0.024  Score=42.18  Aligned_cols=35  Identities=14%  Similarity=0.209  Sum_probs=30.4

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCe-EEEeeCCh
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGAT-VHTCSRTE   54 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~-v~l~~r~~   54 (270)
                      .+|+|+|+|| |-.|..+|..|+++|++ |.++.+++
T Consensus         3 ~~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           3 YSAKIALLGA-GPASISCASFLARLGYSDITIFEKQE   38 (196)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecC
Confidence            3688999987 68999999999999995 99998865

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=93.99  E-value=0.1  Score=39.28  Aligned_cols=72  Identities=21%  Similarity=0.262  Sum_probs=53.1

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      -+++||+||=.|+++|+   ++..++..|+ +|+.++.+++..+...+.    -.++.++.+|+.+              
T Consensus        45 ~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N----~~~~~~~~~D~~~--------------  103 (197)
T d1ne2a_          45 GNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRN----CGGVNFMVADVSE--------------  103 (197)
T ss_dssp             TSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHH----CTTSEEEECCGGG--------------
T ss_pred             CCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHc----cccccEEEEehhh--------------
Confidence            47899999999999884   3445677786 599999998876554433    3457788888753              


Q ss_pred             cCCcccEEEECCCC
Q 024230           95 FNGKLNIFVNNVGT  108 (270)
Q Consensus        95 ~~~~id~li~~ag~  108 (270)
                      +++++|++|.|.-+
T Consensus       104 l~~~fD~Vi~NPPf  117 (197)
T d1ne2a_         104 ISGKYDTWIMNPPF  117 (197)
T ss_dssp             CCCCEEEEEECCCC
T ss_pred             cCCcceEEEeCccc
Confidence            23789999988654

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.95  E-value=0.11  Score=36.55  Aligned_cols=76  Identities=14%  Similarity=0.111  Sum_probs=52.9

Q ss_pred             EEEEecCCCcHHHHHHHHHHHC-CCeEE-EeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           22 TALVTGGTKGLGLAVVEELSML-GATVH-TCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~-G~~v~-l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      +|.|.|++|..|+.+++...+. +.+++ .+++.....     .+...+.++   ..|++.++...+.++.+.+.   ++
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~-----~~~~~~~Dv---vIDFS~p~~~~~~~~~~~~~---~~   69 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLS-----LLTDGNTEV---VIDFTHPDVVMGNLEFLIDN---GI   69 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTH-----HHHTTTCSE---EEECCCTTTHHHHHHHHHHT---TC
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchh-----hhccccCCE---EEEcccHHHHHHHHHHHHhc---CC
Confidence            5899999999999999987765 46644 455543221     122223443   47999999999999888764   56


Q ss_pred             cEEEECCCC
Q 024230          100 NIFVNNVGT  108 (270)
Q Consensus       100 d~li~~ag~  108 (270)
                      -+++-..|.
T Consensus        70 ~~ViGTTG~   78 (135)
T d1yl7a1          70 HAVVGTTGF   78 (135)
T ss_dssp             EEEECCCCC
T ss_pred             CEEEecccc
Confidence            677777775

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=93.94  E-value=0.062  Score=40.35  Aligned_cols=42  Identities=12%  Similarity=0.065  Sum_probs=36.5

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETE   56 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~   56 (270)
                      ...++.||++.|.|. |.||+.+|+.+...|.+|+.+++....
T Consensus        41 ~~~~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~   82 (191)
T d1gdha1          41 VGEKLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRAS   82 (191)
T ss_dssp             CBCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCC
T ss_pred             ccceecccceEEeec-ccchHHHHHHHHhhccccccccccccc
Confidence            356889999999986 789999999999999999999886553

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=93.89  E-value=0.082  Score=36.69  Aligned_cols=35  Identities=23%  Similarity=0.306  Sum_probs=30.8

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTE   54 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~   54 (270)
                      ..|+++|.|| |-||..+|..|++.|.+|.++.+.+
T Consensus        25 ~p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          25 VPGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CCSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             cCCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            3588888887 7999999999999999999997754

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.78  E-value=0.056  Score=40.85  Aligned_cols=38  Identities=18%  Similarity=0.140  Sum_probs=32.3

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHH
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNEC   60 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~   60 (270)
                      +|.|. |.|-+|..+|..|+++|++|++++.+++..+.+
T Consensus         2 kI~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~l   39 (202)
T d1mv8a2           2 RISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLI   39 (202)
T ss_dssp             EEEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             EEEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHh
Confidence            46666 679999999999999999999999998765543

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.78  E-value=0.082  Score=39.37  Aligned_cols=43  Identities=21%  Similarity=0.222  Sum_probs=37.3

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHH
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETEL   57 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~   57 (270)
                      ...++.||++.|.| .|.||+.+++.+...|.+|+.+++.....
T Consensus        38 ~~~~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~~   80 (184)
T d1ygya1          38 SGTEIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSPA   80 (184)
T ss_dssp             CBCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCHH
T ss_pred             ccccccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCChh
Confidence            35679999999998 58999999999999999999999876543

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=93.76  E-value=0.2  Score=39.15  Aligned_cols=74  Identities=15%  Similarity=0.162  Sum_probs=56.7

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      ..+|++||=.|.++|+   ++..+++.|++|+.++.++...+...+.++..+.+..++..|+.+      .+.      .
T Consensus       118 ~~~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~d~~~------~~~------~  182 (254)
T d2nxca1         118 LRPGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEA------ALP------F  182 (254)
T ss_dssp             CCTTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHH------HGG------G
T ss_pred             cCccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHcCCceeEEeccccc------ccc------c
Confidence            4688999999999986   334567889999999999999988888888777777777766421      111      1


Q ss_pred             CcccEEEEC
Q 024230           97 GKLNIFVNN  105 (270)
Q Consensus        97 ~~id~li~~  105 (270)
                      ++.|+++.|
T Consensus       183 ~~fD~V~an  191 (254)
T d2nxca1         183 GPFDLLVAN  191 (254)
T ss_dssp             CCEEEEEEE
T ss_pred             cccchhhhc
Confidence            689999876

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=93.76  E-value=0.48  Score=33.97  Aligned_cols=83  Identities=13%  Similarity=0.153  Sum_probs=56.2

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccC---CCHHHHHHHHHHHHHHc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDV---SSRPQRQTLINTVSSLF   95 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~~~~~i~~~~   95 (270)
                      +|+++.|.+.+||.|.-++..+.+.|.++.-  -+++..+++.+.+....  ..-..+|+   .+.+.+.++++.+.+. 
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~~--l~~~t~~~L~~~lp~~~--~~~NPlD~~~~~~~~~~~~~l~~~~~d-   76 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLAT--LEEKTIEELRSFLPPMA--AVKNPVDMIASARGEDYYRTAKLLLQD-   76 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEECC--CCHHHHHHHHHHSCTTC--EESSEEECCTTCCHHHHHHHHHHHHHS-
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccCC--CCHHHHHHHHHhCCCcc--cCCCcccccCCCCHHHHHHHHHHHHcC-
Confidence            6899999999999999999999999977643  34555555555443321  11233454   3567777777776664 


Q ss_pred             CCcccEEEECCC
Q 024230           96 NGKLNIFVNNVG  107 (270)
Q Consensus        96 ~~~id~li~~ag  107 (270)
                       ..+|.++....
T Consensus        77 -~~vd~v~v~~~   87 (163)
T d2csua3          77 -PNVDMLIAICV   87 (163)
T ss_dssp             -TTCSEEEEEEE
T ss_pred             -CCcCEEEEeec
Confidence             57887765443

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=93.76  E-value=0.22  Score=35.64  Aligned_cols=66  Identities=8%  Similarity=0.070  Sum_probs=42.3

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHC--CCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Q 024230           21 MTALVTGGTKGLGLAVVEELSML--GATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTV   91 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~--G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i   91 (270)
                      |++.|.|+||.||.+...-..+.  .++|+.++-... .+.+.+++.+...+..    -+.|++..+.+.+.+
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N-~~~L~~q~~~f~pk~v----~i~d~~~~~~l~~~l   69 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKN-VTRMVEQCLEFSPRYA----VMDDEASAKLLKTML   69 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSC-HHHHHHHHHHHCCSEE----EESSHHHHHHHHHHH
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCc-HHHHHHHHHHHhhccc----ccccHHHHHHHHHHh
Confidence            68999999999999998888886  357766543222 2455566666655443    244555544444443

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=93.64  E-value=0.042  Score=42.97  Aligned_cols=35  Identities=26%  Similarity=0.290  Sum_probs=32.1

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEee
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCS   51 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~   51 (270)
                      .+|+||+|+|-| .|.+|..+|+.|.+.|++|+.++
T Consensus        27 ~~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs   61 (242)
T d1v9la1          27 GGIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS   61 (242)
T ss_dssp             SCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence            489999999997 78999999999999999988765

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=93.60  E-value=0.53  Score=31.80  Aligned_cols=82  Identities=10%  Similarity=0.086  Sum_probs=55.2

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      ||+|||+--...+-..+...|.+.|++|+....+.+..   .+.+++..-.+.++-.++-+.+ --+++.++++.. ..+
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~a---l~~~~~~~~dliilD~~mp~~~-G~e~~~~ir~~~-~~~   75 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREA---VEKYKELKPDIVTMDITMPEMN-GIDAIKEIMKID-PNA   75 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHH---HHHHHHHCCSEEEEECSCGGGC-HHHHHHHHHHHC-TTC
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHHH---HHHHHhccCCEEEEecCCCCCC-HHHHHHHHHHhC-CCC
Confidence            89999999999999999999999999998665554433   2333343445555444444443 345667776665 456


Q ss_pred             cEEEECC
Q 024230          100 NIFVNNV  106 (270)
Q Consensus       100 d~li~~a  106 (270)
                      -+++..+
T Consensus        76 pvi~ls~   82 (118)
T d1u0sy_          76 KIIVCSA   82 (118)
T ss_dssp             CEEEEEC
T ss_pred             cEEEEEc
Confidence            6666543

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=93.54  E-value=0.041  Score=43.39  Aligned_cols=36  Identities=28%  Similarity=0.316  Sum_probs=32.6

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEee
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCS   51 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~   51 (270)
                      ..+|+||+++|.| .|-+|..+|+.|.+.|++|+.++
T Consensus        31 ~~~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          31 NDTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             TCCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence            4689999999999 69999999999999999988764

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=93.32  E-value=0.044  Score=41.48  Aligned_cols=40  Identities=20%  Similarity=0.150  Sum_probs=35.7

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChh
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTET   55 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~   55 (270)
                      +.+|.||++.|.|. |.||+.+|+.+...|.+|+.+++...
T Consensus        40 ~~~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   79 (199)
T d1dxya1          40 GKELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPM   79 (199)
T ss_dssp             CCCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccccceeeeeeec-ccccccccccccccceeeeccCCccc
Confidence            46899999999986 68999999999999999999998654

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.31  E-value=0.45  Score=36.12  Aligned_cols=44  Identities=14%  Similarity=0.113  Sum_probs=36.8

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHH
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHL   64 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~   64 (270)
                      ..|++||..|.+.|   ..+..|+++|++|+.++-++...+.+.+..
T Consensus        44 ~~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~   87 (229)
T d2bzga1          44 KSGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQ   87 (229)
T ss_dssp             CCSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHT
T ss_pred             CCCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHh
Confidence            37789999999887   568889999999999999998877665543

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.27  E-value=0.42  Score=38.65  Aligned_cols=80  Identities=14%  Similarity=0.177  Sum_probs=54.2

Q ss_pred             CCCEEEEecCCC-cHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcCC--eEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           19 QGMTALVTGGTK-GLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKGL--KVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        19 ~gk~vlItG~s~-giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      +|++||=.++.. +++..    ++..|+ +|+.++.+++.++...+.+...+.  ++.++..|+.+      ....+...
T Consensus       145 ~g~~VLDl~~g~G~~si~----~a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~~------~~~~~~~~  214 (324)
T d2as0a2         145 PGDRVLDVFTYTGGFAIH----AAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFE------EMEKLQKK  214 (324)
T ss_dssp             TTCEEEETTCTTTHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH------HHHHHHHT
T ss_pred             CCCeeecccCcccchhhh----hhhcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhhh------hhHHHHhc
Confidence            488998666654 44433    446676 699999999999888888877763  57777776542      22222222


Q ss_pred             cCCcccEEEECCCCC
Q 024230           95 FNGKLNIFVNNVGTS  109 (270)
Q Consensus        95 ~~~~id~li~~ag~~  109 (270)
                       +.++|++|.++-..
T Consensus       215 -~~~fD~Vi~DpP~~  228 (324)
T d2as0a2         215 -GEKFDIVVLDPPAF  228 (324)
T ss_dssp             -TCCEEEEEECCCCS
T ss_pred             -cCCCCchhcCCccc
Confidence             25899999887543

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.22  E-value=0.36  Score=36.46  Aligned_cols=80  Identities=18%  Similarity=0.140  Sum_probs=58.0

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcC-CeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG-LKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      .|.+||-+|+++|.-..+..++...+.+|+.++.+++..+...+.++..+ .++.++..|..+..     .    .  .+
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~~-----~----~--~~  143 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGV-----P----E--FS  143 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC-----G----G--GC
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHcc-----c----c--cc
Confidence            46799999999888777666666666799999999998888887777654 35666666654310     0    0  15


Q ss_pred             cccEEEECCCCC
Q 024230           98 KLNIFVNNVGTS  109 (270)
Q Consensus        98 ~id~li~~ag~~  109 (270)
                      ++|.++.+++..
T Consensus       144 ~fD~I~~~~~~~  155 (213)
T d1dl5a1         144 PYDVIFVTVGVD  155 (213)
T ss_dssp             CEEEEEECSBBS
T ss_pred             chhhhhhhccHH
Confidence            799999887753

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=93.13  E-value=0.093  Score=38.13  Aligned_cols=75  Identities=16%  Similarity=0.266  Sum_probs=53.7

Q ss_pred             cccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           13 QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        13 ~~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      .....+.||+++|.| -|-+|+.+|+.|...|++|+++..++-..  +.+..  .|-++       ..   +++++    
T Consensus        16 ~t~~~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~a--lqA~m--dGf~v-------~~---~~~a~----   76 (163)
T d1v8ba1          16 ATDFLISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICA--IQAVM--EGFNV-------VT---LDEIV----   76 (163)
T ss_dssp             HHCCCCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHH--HHHHT--TTCEE-------CC---HHHHT----
T ss_pred             HhCceecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchhh--HHHHh--cCCcc-------Cc---hhHcc----
Confidence            445789999999987 57899999999999999999999988542  22222  23222       12   12233    


Q ss_pred             HHcCCcccEEEECCCCCC
Q 024230           93 SLFNGKLNIFVNNVGTSV  110 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~~  110 (270)
                          ..-|++|.+.|...
T Consensus        77 ----~~aDi~vTaTGn~~   90 (163)
T d1v8ba1          77 ----DKGDFFITCTGNVD   90 (163)
T ss_dssp             ----TTCSEEEECCSSSS
T ss_pred             ----ccCcEEEEcCCCCc
Confidence                56799999998754

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=93.09  E-value=0.18  Score=34.27  Aligned_cols=34  Identities=21%  Similarity=0.302  Sum_probs=27.1

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHC---CCeEEEeeCCh
Q 024230           20 GMTALVTGGTKGLGLAVVEELSML---GATVHTCSRTE   54 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~---G~~v~l~~r~~   54 (270)
                      +|+++|.|| |.+|..+|..|.+.   |.+|.++.|.+
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            588999998 89999999766654   45799998754

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=93.05  E-value=0.79  Score=30.94  Aligned_cols=84  Identities=13%  Similarity=0.124  Sum_probs=49.2

Q ss_pred             CEEEEecCC---CcHHHHHHHHHHHCCCeEEEeeCChhHH--HHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           21 MTALVTGGT---KGLGLAVVEELSMLGATVHTCSRTETEL--NECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        21 k~vlItG~s---~giG~~la~~l~~~G~~v~l~~r~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      |+|.|+|+|   +..|..+.+.|.+.|++|+.+..+.++.  ......+.+....+..... ...++.+.++++++.+. 
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~~lp~~~D~vvi-~vp~~~~~~~l~~~~~~-   79 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVIVF-VVPPKVGLQVAKEAVEA-   79 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSCTTCCEEEE-CSCHHHHHHHHHHHHHT-
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccccCccccccchhccccceEEEE-EeCHHHHHHHHHHHHhc-
Confidence            789999998   5689999999999999999887554321  1111112211111111111 12455666777766553 


Q ss_pred             CCcccEEEECCCC
Q 024230           96 NGKLNIFVNNVGT  108 (270)
Q Consensus        96 ~~~id~li~~ag~  108 (270)
                        .+..++...|.
T Consensus        80 --g~k~v~~~~g~   90 (116)
T d1y81a1          80 --GFKKLWFQPGA   90 (116)
T ss_dssp             --TCCEEEECTTS
T ss_pred             --CCceEEeccch
Confidence              35566655543

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=92.95  E-value=0.083  Score=39.26  Aligned_cols=79  Identities=13%  Similarity=0.129  Sum_probs=55.4

Q ss_pred             CCCCCEEE-EecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcC--CeEEEEEccCCCHHHHHHHHHHHH
Q 024230           17 SLQGMTAL-VTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKG--LKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        17 ~l~gk~vl-ItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      .++|++|| +-.|+|++|.+    .+.+|+ +|+.++.+++..+.+.+.++..+  .++.++..|..+      .++...
T Consensus        39 ~~~~~~vLDlfaGsG~~g~e----a~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~D~~~------~l~~~~  108 (182)
T d2fhpa1          39 YFDGGMALDLYSGSGGLAIE----AVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANR------ALEQFY  108 (182)
T ss_dssp             CCSSCEEEETTCTTCHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH------HHHHHH
T ss_pred             hcCCCEEEEcccccccccce----eeecchhHHHHHHHHHHHHHHHHHHhhhhhcccccccccccchh------hhhhhc
Confidence            57899988 55566667775    456788 59999999998888777776543  367777777643      344433


Q ss_pred             HHcCCcccEEEECC
Q 024230           93 SLFNGKLNIFVNNV  106 (270)
Q Consensus        93 ~~~~~~id~li~~a  106 (270)
                      ..- .++|+++..+
T Consensus       109 ~~~-~~fDlIflDP  121 (182)
T d2fhpa1         109 EEK-LQFDLVLLDP  121 (182)
T ss_dssp             HTT-CCEEEEEECC
T ss_pred             ccC-CCcceEEech
Confidence            332 5799999776

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=92.83  E-value=0.082  Score=42.33  Aligned_cols=36  Identities=22%  Similarity=0.188  Sum_probs=32.7

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEee
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCS   51 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~   51 (270)
                      ..+|+||+|+|.|- |.+|..+|+.|.+.|++|+.++
T Consensus        31 ~~~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vs   66 (293)
T d1hwxa1          31 TPGFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVG   66 (293)
T ss_dssp             CSSSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence            45899999999997 7999999999999999988875

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=92.74  E-value=0.044  Score=41.98  Aligned_cols=35  Identities=20%  Similarity=0.247  Sum_probs=31.4

Q ss_pred             CCCEEEEecCCCcHHHH-----HHHHHHHCCCeEEEeeCC
Q 024230           19 QGMTALVTGGTKGLGLA-----VVEELSMLGATVHTCSRT   53 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~-----la~~l~~~G~~v~l~~r~   53 (270)
                      .||+|.|+|+-||.|+.     +|..|+++|.+|.+++-+
T Consensus         1 m~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           1 MGRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             CCEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            47899999999999996     788999999999999865

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=92.71  E-value=0.055  Score=43.19  Aligned_cols=37  Identities=19%  Similarity=0.193  Sum_probs=31.4

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChh
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTET   55 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~   55 (270)
                      -+.|+|+|+||+ --|.+.|..|+++|++|.++.+++.
T Consensus        28 ~~pkkV~IIGaG-~aGLsaA~~L~~~G~~V~vlE~~~~   64 (370)
T d2iida1          28 SNPKHVVIVGAG-MAGLSAAYVLAGAGHQVTVLEASER   64 (370)
T ss_dssp             SSCCEEEEECCB-HHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCCCeEEEECCC-HHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            366899999984 6699999999999999999987643

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=92.69  E-value=0.073  Score=41.20  Aligned_cols=36  Identities=25%  Similarity=0.242  Sum_probs=30.8

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChh
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTET   55 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~   55 (270)
                      ..++|+|+|| |--|..+|..|+++|++|+++.|+++
T Consensus         3 ~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           3 TTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            4568999987 67899999999999999999998653

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=92.67  E-value=0.11  Score=37.14  Aligned_cols=38  Identities=13%  Similarity=0.032  Sum_probs=31.1

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHH
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNEC   60 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~   60 (270)
                      +|-|.| .|-+|..+|+.|+++|++|..++++++.....
T Consensus         2 kIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~   39 (152)
T d1i36a2           2 RVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIE   39 (152)
T ss_dssp             EEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHH
T ss_pred             EEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHH
Confidence            466664 59999999999999999999998877665443

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=92.57  E-value=0.038  Score=37.30  Aligned_cols=41  Identities=20%  Similarity=0.134  Sum_probs=34.3

Q ss_pred             ccCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChh
Q 024230           14 NRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTET   55 (270)
Q Consensus        14 ~~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~   55 (270)
                      ...+++||+|+|.|++ --|..+|..|++.+.++++..|+..
T Consensus        26 ~~~~f~gK~VlVVG~g-~Sa~dia~~l~~~ak~v~~~~~r~~   66 (107)
T d2gv8a2          26 EPELFVGESVLVVGGA-SSANDLVRHLTPVAKHPIYQSLLGG   66 (107)
T ss_dssp             CGGGGTTCCEEEECSS-HHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred             chhhcCCCeEEEECCC-CCHHHHHHHHHHhcCEEEEEEecCc
Confidence            3467999999999986 7788999999999888877777654

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=92.33  E-value=0.077  Score=42.97  Aligned_cols=36  Identities=19%  Similarity=0.295  Sum_probs=30.8

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChh
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTET   55 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~   55 (270)
                      +.|+|+|+|| |--|..+|..|+++|++|.++.++..
T Consensus         1 k~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           1 KSKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            4689999987 56788999999999999999987654

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=92.32  E-value=0.18  Score=36.14  Aligned_cols=53  Identities=15%  Similarity=0.141  Sum_probs=37.6

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHC--CCeEEEeeCChhHHHHHHHHHHhcCCeEE
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSML--GATVHTCSRTETELNECIHHLQMKGLKVT   72 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~--G~~v~l~~r~~~~~~~~~~~~~~~~~~~~   72 (270)
                      +.|+|.|.|+||.||.+...-+.+.  .++|+.++-..+ .+.+.+++.+...+..
T Consensus         1 ~pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N-~~~L~~q~~ef~Pk~v   55 (150)
T d1r0ka2           1 QPRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRN-VKDLADAAKRTNAKRA   55 (150)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSC-HHHHHHHHHHTTCSEE
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCC-HHHHHHHHHhhccccc
Confidence            3589999999999999988888775  467776643322 2455666666665544

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=92.28  E-value=1.1  Score=31.55  Aligned_cols=77  Identities=13%  Similarity=0.129  Sum_probs=54.0

Q ss_pred             CCCCCEEEEecCCCc-HHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcC--CeEEEEEccCCCHHHHHHHHHHHH
Q 024230           17 SLQGMTALVTGGTKG-LGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKG--LKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        17 ~l~gk~vlItG~s~g-iG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      .++|++||=.|+++| +|.    +.+.+|+ +|+.++.+++..+.+.+.++..+  .++.++..|..+      .++   
T Consensus        12 ~~~g~~vlDl~~GtG~~~i----ea~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~------~l~---   78 (152)
T d2esra1          12 YFNGGRVLDLFAGSGGLAI----EAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER------AID---   78 (152)
T ss_dssp             CCCSCEEEEETCTTCHHHH----HHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH------HHH---
T ss_pred             hCCCCeEEEcCCccCHHHH----HHHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcccccc------ccc---
Confidence            578999996665555 444    4567787 79999999998888888777664  457888877432      222   


Q ss_pred             HHcCCcccEEEECCC
Q 024230           93 SLFNGKLNIFVNNVG  107 (270)
Q Consensus        93 ~~~~~~id~li~~ag  107 (270)
                       ...++.|+++..+-
T Consensus        79 -~~~~~fDiIf~DPP   92 (152)
T d2esra1          79 -CLTGRFDLVFLDPP   92 (152)
T ss_dssp             -HBCSCEEEEEECCS
T ss_pred             -ccccccceeEechh
Confidence             22368999988753

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=92.27  E-value=0.084  Score=38.16  Aligned_cols=35  Identities=17%  Similarity=0.255  Sum_probs=29.8

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC--eEEEeeCCh
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGA--TVHTCSRTE   54 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~--~v~l~~r~~   54 (270)
                      .||+|+|+|| |..|..+|..|.+.|.  +|.++++++
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            4899999998 5779999999999985  688887765

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.09  E-value=0.36  Score=38.64  Aligned_cols=75  Identities=12%  Similarity=0.134  Sum_probs=53.8

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHH
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMK--GLKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      -.++||+||-.|++.|+   ++..++++|+ +|+.++.++... ...+.....  ..++.++..|+.+...         
T Consensus        32 ~~~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~~-~a~~~~~~~~~~~~i~~~~~~~~~l~~---------   98 (311)
T d2fyta1          32 HIFKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEILY-QAMDIIRLNKLEDTITLIKGKIEEVHL---------   98 (311)
T ss_dssp             GGTTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHHH-HHHHHHHHTTCTTTEEEEESCTTTSCC---------
T ss_pred             ccCCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHHH-HHHHHHHHhCCCccceEEEeeHHHhcC---------
Confidence            45689999999999886   6777888997 699999887643 334444433  3568888888876421         


Q ss_pred             HHcCCcccEEEEC
Q 024230           93 SLFNGKLNIFVNN  105 (270)
Q Consensus        93 ~~~~~~id~li~~  105 (270)
                        ...++|+++..
T Consensus        99 --~~~~~D~Ivse  109 (311)
T d2fyta1          99 --PVEKVDVIISE  109 (311)
T ss_dssp             --SCSCEEEEEEC
T ss_pred             --ccccceEEEEe
Confidence              11579999875

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=92.05  E-value=1.3  Score=35.46  Aligned_cols=79  Identities=14%  Similarity=0.109  Sum_probs=53.2

Q ss_pred             CCCEEEEecC-CCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcC---CeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           19 QGMTALVTGG-TKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG---LKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        19 ~gk~vlItG~-s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      ++++||=..+ +|+++.+    ++..|++|+.++.++..++...+.+..++   .++.++..|+.+      .++.....
T Consensus       132 ~~~rVLdlf~~tG~~sl~----aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~~------~l~~~~~~  201 (309)
T d2igta1         132 RPLKVLNLFGYTGVASLV----AAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMK------FIQREERR  201 (309)
T ss_dssp             SCCEEEEETCTTCHHHHH----HHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHH------HHHHHHHH
T ss_pred             CCCeEEEecCCCcHHHHH----HHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHHH------hHHHHhhc
Confidence            5788885444 4444443    45679999999999998888777766543   357777777642      34444333


Q ss_pred             cCCcccEEEECCCC
Q 024230           95 FNGKLNIFVNNVGT  108 (270)
Q Consensus        95 ~~~~id~li~~ag~  108 (270)
                      - .++|+||...=.
T Consensus       202 ~-~~fD~IilDPP~  214 (309)
T d2igta1         202 G-STYDIILTDPPK  214 (309)
T ss_dssp             T-CCBSEEEECCCS
T ss_pred             C-CCCCEEEECCCc
Confidence            2 689999988543

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.91  E-value=0.58  Score=35.58  Aligned_cols=80  Identities=13%  Similarity=0.101  Sum_probs=60.5

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcC------CeEEEEEccCCCHHHHHHHHHHHH
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG------LKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      +|.+||-+|.++|.-.++..++.....+|+.++++++-.+...+.++..+      .++.+...|..+..         .
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~---------~  146 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY---------A  146 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC---------G
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeeccccc---------c
Confidence            57899999999999988888888888899999999998877777765432      35666777764210         0


Q ss_pred             HHcCCcccEEEECCCCC
Q 024230           93 SLFNGKLNIFVNNVGTS  109 (270)
Q Consensus        93 ~~~~~~id~li~~ag~~  109 (270)
                      . . +++|.++.+++..
T Consensus       147 ~-~-~~fD~I~~~~~~~  161 (224)
T d1i1na_         147 E-E-APYDAIHVGAAAP  161 (224)
T ss_dssp             G-G-CCEEEEEECSBBS
T ss_pred             h-h-hhhhhhhhhcchh
Confidence            0 1 5799999888763

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=91.87  E-value=0.04  Score=43.58  Aligned_cols=41  Identities=17%  Similarity=0.259  Sum_probs=35.0

Q ss_pred             cCCCCCCEEEEecCCCcHHHH-----HHHHHHHCCCeEEEeeCChh
Q 024230           15 RWSLQGMTALVTGGTKGLGLA-----VVEELSMLGATVHTCSRTET   55 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~-----la~~l~~~G~~v~l~~r~~~   55 (270)
                      .+.=.+++|+|+.|-||+|+.     +|..|+++|.+|.+++-++.
T Consensus        14 ~~~~~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          14 DIARNEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             HHHTTSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             HhhcCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            344578889999889999997     58999999999999998865

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=91.80  E-value=0.077  Score=41.48  Aligned_cols=31  Identities=23%  Similarity=0.210  Sum_probs=27.3

Q ss_pred             EEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh
Q 024230           23 ALVTGGTKGLGLAVVEELSMLGATVHTCSRTE   54 (270)
Q Consensus        23 vlItG~s~giG~~la~~l~~~G~~v~l~~r~~   54 (270)
                      |+|+|| |-.|.++|.+|+++|.+|+++++.+
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            677765 7899999999999999999999865

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=91.59  E-value=0.46  Score=34.49  Aligned_cols=79  Identities=9%  Similarity=-0.016  Sum_probs=49.7

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      .+|++||=.|+++|.   ++-..+.+|++|+.++.+++..+.+.+.++..+....+...   +.+.   +....... ..
T Consensus        40 ~~g~~vLDl~~G~G~---~~i~a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~---~~d~---~~~~~~~~-~~  109 (171)
T d1ws6a1          40 PRRGRFLDPFAGSGA---VGLEAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVAL---PVEV---FLPEAKAQ-GE  109 (171)
T ss_dssp             TTCCEEEEETCSSCH---HHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECS---CHHH---HHHHHHHT-TC
T ss_pred             cCCCeEEEeccccch---hhhhhhhccchhhhcccCHHHHhhhhHHHHhhccccceeee---ehhc---cccccccc-CC
Confidence            478888855555442   33456678999999999999988888877776544332222   2222   22222222 25


Q ss_pred             cccEEEECC
Q 024230           98 KLNIFVNNV  106 (270)
Q Consensus        98 ~id~li~~a  106 (270)
                      ++|+++.++
T Consensus       110 ~fD~If~DP  118 (171)
T d1ws6a1         110 RFTVAFMAP  118 (171)
T ss_dssp             CEEEEEECC
T ss_pred             ccceeEEcc
Confidence            799999875

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=91.36  E-value=0.12  Score=39.59  Aligned_cols=37  Identities=24%  Similarity=0.251  Sum_probs=32.0

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTE   54 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~   54 (270)
                      .-.+|+|+|+|| |-.|...|..|+++|++|.++.++.
T Consensus        46 ~~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          46 TKNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             CSSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             ccCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeecc
Confidence            347799999998 5679999999999999999998754

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=91.28  E-value=0.67  Score=29.75  Aligned_cols=71  Identities=18%  Similarity=0.154  Sum_probs=48.5

Q ss_pred             CEEEEecCCCcHHH-HHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           21 MTALVTGGTKGLGL-AVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        21 k~vlItG~s~giG~-~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      ++|-++|- +|+|- ++|+.|.++|+.|-..|+.+...   .+.|++.|.+++ ..-|..+              + ...
T Consensus         2 ~~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~---t~~L~~~Gi~i~-~gh~~~~--------------i-~~~   61 (89)
T d1j6ua1           2 MKIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETER---TAYLRKLGIPIF-VPHSADN--------------W-YDP   61 (89)
T ss_dssp             CEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCHH---HHHHHHTTCCEE-SSCCTTS--------------C-CCC
T ss_pred             cEEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCChh---HHHHHHCCCeEE-eeecccc--------------c-CCC
Confidence            45666655 56776 79999999999999999886543   334667776553 2223222              1 468


Q ss_pred             cEEEECCCCCCC
Q 024230          100 NIFVNNVGTSVL  111 (270)
Q Consensus       100 d~li~~ag~~~~  111 (270)
                      |.+|+..++...
T Consensus        62 d~vV~SsAI~~~   73 (89)
T d1j6ua1          62 DLVIKTPAVRDD   73 (89)
T ss_dssp             SEEEECTTCCTT
T ss_pred             CEEEEecCcCCC
Confidence            999999988543

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=91.27  E-value=0.9  Score=33.14  Aligned_cols=75  Identities=21%  Similarity=0.144  Sum_probs=55.2

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcC--CeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG--LKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      +|.+||=.|+++|   .++..+++.+.+|+.++.+++..+...+.++..+  .++.++..|..+      ..    ... 
T Consensus        33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~~------~~----~~~-   98 (186)
T d1l3ia_          33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE------AL----CKI-   98 (186)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH------HH----TTS-
T ss_pred             CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchhh------cc----ccc-
Confidence            5788888888777   3345567778899999999999988888888776  478888887421      11    111 


Q ss_pred             CcccEEEECCC
Q 024230           97 GKLNIFVNNVG  107 (270)
Q Consensus        97 ~~id~li~~ag  107 (270)
                      ..+|.++.+..
T Consensus        99 ~~~D~v~~~~~  109 (186)
T d1l3ia_          99 PDIDIAVVGGS  109 (186)
T ss_dssp             CCEEEEEESCC
T ss_pred             CCcCEEEEeCc
Confidence            57999987754

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=90.93  E-value=0.071  Score=40.64  Aligned_cols=34  Identities=26%  Similarity=0.289  Sum_probs=30.2

Q ss_pred             CEEEEecCCCcHHHH-----HHHHHHHCCCeEEEeeCCh
Q 024230           21 MTALVTGGTKGLGLA-----VVEELSMLGATVHTCSRTE   54 (270)
Q Consensus        21 k~vlItG~s~giG~~-----la~~l~~~G~~v~l~~r~~   54 (270)
                      |+|.|+++-||.|+.     +|..|+++|.+|.+++-+.
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~   40 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI   40 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            789999999999986     7889999999999998754

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=90.88  E-value=3.1  Score=33.12  Aligned_cols=80  Identities=16%  Similarity=0.122  Sum_probs=54.0

Q ss_pred             CCCCEEEEecC-CCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcC---CeEEEEEccCCCHHHHHHHHHHHH
Q 024230           18 LQGMTALVTGG-TKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKG---LKVTGSVCDVSSRPQRQTLINTVS   92 (270)
Q Consensus        18 l~gk~vlItG~-s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~i~   92 (270)
                      -+|++||=..+ +|+++.+    .+..|+ .|+.++.++..++...+.++.++   .++.++..|.-+      .++...
T Consensus       143 ~~g~~VLdlf~~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~~------~l~~~~  212 (317)
T d2b78a2         143 AAGKTVLNLFSYTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFD------YFKYAR  212 (317)
T ss_dssp             TBTCEEEEETCTTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHH------HHHHHH
T ss_pred             hCCCceeecCCCCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHHH------HHHHHH
Confidence            36899985554 4444433    445687 59999999998888877777664   357788887732      333333


Q ss_pred             HHcCCcccEEEECCCC
Q 024230           93 SLFNGKLNIFVNNVGT  108 (270)
Q Consensus        93 ~~~~~~id~li~~ag~  108 (270)
                      ..- .++|++|..+-.
T Consensus       213 ~~~-~~fD~Ii~DPP~  227 (317)
T d2b78a2         213 RHH-LTYDIIIIDPPS  227 (317)
T ss_dssp             HTT-CCEEEEEECCCC
T ss_pred             hhc-CCCCEEEEcChh
Confidence            332 589999998644

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=90.86  E-value=0.46  Score=33.81  Aligned_cols=83  Identities=8%  Similarity=0.037  Sum_probs=52.8

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhc------CCeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK------GLKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      +|-+.|- |-+|..+|+.|++.|+.+ .++|+.++.++..+.....      -.+...+...+.+.+.+....+.+....
T Consensus         2 kIg~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~   79 (156)
T d2cvza2           2 KVAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYL   79 (156)
T ss_dssp             CEEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTC
T ss_pred             eEEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhccccccc
Confidence            3566776 899999999999988765 5777777766655543221      0122234455666777777777766554


Q ss_pred             CCcccEEEECCC
Q 024230           96 NGKLNIFVNNVG  107 (270)
Q Consensus        96 ~~~id~li~~ag  107 (270)
                       .+-.++|.+.-
T Consensus        80 -~~~~~iid~sT   90 (156)
T d2cvza2          80 -REGTYWVDATS   90 (156)
T ss_dssp             -CTTEEEEECSC
T ss_pred             -ccccccccccc
Confidence             34555555543

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=90.81  E-value=0.2  Score=37.27  Aligned_cols=40  Identities=15%  Similarity=0.105  Sum_probs=35.3

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChh
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTET   55 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~   55 (270)
                      +.++.+|++.|. |.|.||+.+|+.+...|.+|+..++...
T Consensus        39 ~~~l~~~~vgii-G~G~IG~~va~~l~~fg~~v~~~d~~~~   78 (188)
T d1sc6a1          39 SFEARGKKLGII-GYGHIGTQLGILAESLGMYVYFYDIENK   78 (188)
T ss_dssp             CCCSTTCEEEEE-CCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccccceEEEEe-ecccchhhhhhhcccccceEeecccccc
Confidence            457999999999 5689999999999999999999998654

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=90.64  E-value=1.1  Score=35.02  Aligned_cols=78  Identities=13%  Similarity=0.122  Sum_probs=54.5

Q ss_pred             CCEEEEecCCCcH-HHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcC--CeEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           20 GMTALVTGGTKGL-GLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG--LKVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        20 gk~vlItG~s~gi-G~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      .++++-.|+++|+ +.+++ +  ...++|+.++.+++.++-..+.++..+  .++.+...|+.+.         +...+ 
T Consensus       111 ~~~vld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~---------~~~~~-  177 (271)
T d1nv8a_         111 IKTVADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP---------FKEKF-  177 (271)
T ss_dssp             CCEEEEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG---------GGGGT-
T ss_pred             ccEEEEeeeeeehhhhhhh-h--cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccc---------ccccc-
Confidence            4566756666664 44444 3  356899999999999988888887765  3677778888653         11222 


Q ss_pred             CcccEEEECCCCCC
Q 024230           97 GKLNIFVNNVGTSV  110 (270)
Q Consensus        97 ~~id~li~~ag~~~  110 (270)
                      +++|++|.|.-+.+
T Consensus       178 ~~fDlIVsNPPYI~  191 (271)
T d1nv8a_         178 ASIEMILSNPPYVK  191 (271)
T ss_dssp             TTCCEEEECCCCBC
T ss_pred             CcccEEEEcccccC
Confidence            68999999987654

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=90.53  E-value=0.63  Score=35.44  Aligned_cols=75  Identities=15%  Similarity=-0.007  Sum_probs=53.0

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      .|.+||-+|+++|.-.+   .|++.+.+|+.++++++..+...+.+. ...++.++..|..+-         +.+ . ++
T Consensus        70 ~g~~VLdIG~GsGy~ta---~La~l~~~V~aiE~~~~~~~~A~~~~~-~~~nv~~~~~d~~~g---------~~~-~-~p  134 (224)
T d1vbfa_          70 KGQKVLEIGTGIGYYTA---LIAEIVDKVVSVEINEKMYNYASKLLS-YYNNIKLILGDGTLG---------YEE-E-KP  134 (224)
T ss_dssp             TTCEEEEECCTTSHHHH---HHHHHSSEEEEEESCHHHHHHHHHHHT-TCSSEEEEESCGGGC---------CGG-G-CC
T ss_pred             ccceEEEecCCCCHHHH---HHHHHhcccccccccHHHHHHHHHHHh-cccccccccCchhhc---------chh-h-hh
Confidence            56789999999886544   455667899999999887766655443 345788888887531         011 1 68


Q ss_pred             ccEEEECCCC
Q 024230           99 LNIFVNNVGT  108 (270)
Q Consensus        99 id~li~~ag~  108 (270)
                      +|.++.+++.
T Consensus       135 fD~Iiv~~a~  144 (224)
T d1vbfa_         135 YDRVVVWATA  144 (224)
T ss_dssp             EEEEEESSBB
T ss_pred             HHHHHhhcch
Confidence            9999988775

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=90.43  E-value=0.37  Score=33.32  Aligned_cols=77  Identities=10%  Similarity=0.029  Sum_probs=52.1

Q ss_pred             CCCEEEEecCC----------CcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHH
Q 024230           19 QGMTALVTGGT----------KGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLI   88 (270)
Q Consensus        19 ~gk~vlItG~s----------~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   88 (270)
                      .-|+|||.|++          .--+.+.++.|.+.|++++++..|++...--.    ...+++++.+.   +.+++.+++
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~----d~aD~lYfePl---t~e~v~~Ii   78 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDP----EMADATYIEPI---HWEVVRKII   78 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCG----GGSSEEECSCC---CHHHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcCh----hhcceeeeecC---CHHHHHHHH
Confidence            45789999985          23466789999999999999999988642111    12345654333   355655555


Q ss_pred             HHHHHHcCCcccEEEECCCC
Q 024230           89 NTVSSLFNGKLNIFVNNVGT  108 (270)
Q Consensus        89 ~~i~~~~~~~id~li~~ag~  108 (270)
                      +.      .++|.++-..|.
T Consensus        79 ~~------E~pd~il~~~GG   92 (127)
T d1a9xa3          79 EK------ERPDAVLPTMGG   92 (127)
T ss_dssp             HH------HCCSEEECSSSH
T ss_pred             HH------hCcCCeEEEeee
Confidence            43      478888877664

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=90.40  E-value=0.62  Score=31.26  Aligned_cols=34  Identities=21%  Similarity=0.302  Sum_probs=27.4

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHC---CCeEEEeeCCh
Q 024230           20 GMTALVTGGTKGLGLAVVEELSML---GATVHTCSRTE   54 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~---G~~v~l~~r~~   54 (270)
                      +|+++|.|| |.+|.++|..|++.   |.+|.++.|.+
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~   54 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGD   54 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceecccc
Confidence            588888887 68999999876654   88999998864

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=90.27  E-value=0.61  Score=32.48  Aligned_cols=35  Identities=23%  Similarity=0.093  Sum_probs=30.7

Q ss_pred             CCCEEEEecCC---CcHHHHHHHHHHHCCCeEEEeeCC
Q 024230           19 QGMTALVTGGT---KGLGLAVVEELSMLGATVHTCSRT   53 (270)
Q Consensus        19 ~gk~vlItG~s---~giG~~la~~l~~~G~~v~l~~r~   53 (270)
                      +.|+|.|+|+|   +..|..+.+.|.+.|++++.+.-+
T Consensus        12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~   49 (136)
T d1iuka_          12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPR   49 (136)
T ss_dssp             HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGG
T ss_pred             CCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEec
Confidence            67899999999   568999999999999998887554

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.27  E-value=0.14  Score=38.60  Aligned_cols=31  Identities=23%  Similarity=0.189  Sum_probs=26.7

Q ss_pred             EEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh
Q 024230           23 ALVTGGTKGLGLAVVEELSMLGATVHTCSRTE   54 (270)
Q Consensus        23 vlItG~s~giG~~la~~l~~~G~~v~l~~r~~   54 (270)
                      |+|+| +|--|..+|..|+++|.+|.++.+++
T Consensus         8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            67777 57788899999999999999998865

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=90.11  E-value=0.95  Score=29.39  Aligned_cols=73  Identities=14%  Similarity=0.107  Sum_probs=47.9

Q ss_pred             CCCEEEEecCCCcHH-HHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           19 QGMTALVTGGTKGLG-LAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG-~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      +.|++-+.|-+ |+| .++|+.|.++|+.|...|+......   +.+.+.|..++  ..+-.  +           .. .
T Consensus         7 ~~~~ihfiGig-G~GMs~LA~~L~~~G~~VsGSD~~~~~~~---~~L~~~Gi~v~--~g~~~--~-----------~i-~   66 (96)
T d1p3da1           7 RVQQIHFIGIG-GAGMSGIAEILLNEGYQISGSDIADGVVT---QRLAQAGAKIY--IGHAE--E-----------HI-E   66 (96)
T ss_dssp             TCCEEEEETTT-STTHHHHHHHHHHHTCEEEEEESCCSHHH---HHHHHTTCEEE--ESCCG--G-----------GG-T
T ss_pred             hCCEEEEEEEC-HHHHHHHHHHHHhCCCEEEEEeCCCChhh---hHHHHCCCeEE--ECCcc--c-----------cC-C
Confidence            55788888875 445 5789999999999999998755432   23444565443  22211  1           11 4


Q ss_pred             cccEEEECCCCCCC
Q 024230           98 KLNIFVNNVGTSVL  111 (270)
Q Consensus        98 ~id~li~~ag~~~~  111 (270)
                      ..|.+|+..++...
T Consensus        67 ~~d~vV~S~AI~~~   80 (96)
T d1p3da1          67 GASVVVVSSAIKDD   80 (96)
T ss_dssp             TCSEEEECTTSCTT
T ss_pred             CCCEEEECCCcCCC
Confidence            67999999887543

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=89.66  E-value=0.16  Score=39.80  Aligned_cols=31  Identities=19%  Similarity=0.316  Sum_probs=26.4

Q ss_pred             EEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh
Q 024230           23 ALVTGGTKGLGLAVVEELSMLGATVHTCSRTE   54 (270)
Q Consensus        23 vlItG~s~giG~~la~~l~~~G~~v~l~~r~~   54 (270)
                      |+|+|| |-.|.++|.+|+++|++|+++.+..
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            566655 7889999999999999999998753

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=89.57  E-value=0.24  Score=38.26  Aligned_cols=36  Identities=25%  Similarity=0.212  Sum_probs=31.2

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHH-CCCeEEEee
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSM-LGATVHTCS   51 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~-~G~~v~l~~   51 (270)
                      +.+++||+++|-| .|.+|..+|+.|.+ .|++|+.++
T Consensus        26 ~~~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          26 GIDPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             TCCTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CCCcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            4689999999996 79999999999985 599988765

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=89.52  E-value=0.086  Score=41.38  Aligned_cols=33  Identities=18%  Similarity=0.348  Sum_probs=28.9

Q ss_pred             CEEEEecCCCcHHHH-----HHHHHHHCCCeEEEeeCCh
Q 024230           21 MTALVTGGTKGLGLA-----VVEELSMLGATVHTCSRTE   54 (270)
Q Consensus        21 k~vlItG~s~giG~~-----la~~l~~~G~~v~l~~r~~   54 (270)
                      |+|.|+| -||+|+.     +|..|+++|++|.++|-++
T Consensus         2 r~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~   39 (269)
T d1cp2a_           2 RQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDP   39 (269)
T ss_dssp             EEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECT
T ss_pred             CEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence            6888998 9999986     6779999999999998875

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=89.39  E-value=2.6  Score=29.94  Aligned_cols=74  Identities=8%  Similarity=-0.025  Sum_probs=41.3

Q ss_pred             EEEEecCCCcHHHHHHH-HHHHC-----CCeEEEeeCChhHHHHHHHHHHhc-CCeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           22 TALVTGGTKGLGLAVVE-ELSML-----GATVHTCSRTETELNECIHHLQMK-GLKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        22 ~vlItG~s~giG~~la~-~l~~~-----G~~v~l~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      ++.|.||++ +|..++- .+++.     +.+++|+|.++++++...+..+.. ...... ... ++.   .+.+      
T Consensus         2 KIaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~-~~t-~~~---~~~l------   69 (162)
T d1up7a1           2 RIAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKV-LIS-DTF---EGAV------   69 (162)
T ss_dssp             EEEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEE-EEC-SSH---HHHH------
T ss_pred             EEEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceE-EEe-cCc---cccc------
Confidence            578888854 5554442 23222     358999999999876544433321 111111 111 222   1222      


Q ss_pred             cCCcccEEEECCCCC
Q 024230           95 FNGKLNIFVNNVGTS  109 (270)
Q Consensus        95 ~~~~id~li~~ag~~  109 (270)
                        ..-|++|..+|..
T Consensus        70 --~~aDvVVita~~~   82 (162)
T d1up7a1          70 --VDAKYVIFQFRPG   82 (162)
T ss_dssp             --TTCSEEEECCCTT
T ss_pred             --CCCCEEEEecccC
Confidence              4679999999874

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=89.28  E-value=0.15  Score=39.69  Aligned_cols=32  Identities=28%  Similarity=0.312  Sum_probs=28.0

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGATVHTCSRTE   54 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~   54 (270)
                      +|+|+|| |--|...|.+|+++|++|.++.+++
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           2 NVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            5888888 7789999999999999999998753

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=89.04  E-value=0.3  Score=37.75  Aligned_cols=34  Identities=26%  Similarity=0.301  Sum_probs=29.4

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHC-CCeEEEee
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSML-GATVHTCS   51 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~-G~~v~l~~   51 (270)
                      +|+||+|+|.|- |.+|..+|+.|+++ |++|+.++
T Consensus        29 ~l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vs   63 (239)
T d1gtma1          29 TLKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVS   63 (239)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHhcCcceeecc
Confidence            599999999998 66999999999875 89887764

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=88.78  E-value=0.87  Score=34.57  Aligned_cols=80  Identities=11%  Similarity=0.020  Sum_probs=55.9

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHH-CC----CeEEEeeCChhHHHHHHHHHHhc------CCeEEEEEccCCCHHHHHHH
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSM-LG----ATVHTCSRTETELNECIHHLQMK------GLKVTGSVCDVSSRPQRQTL   87 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~-~G----~~v~l~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~   87 (270)
                      +|.+||.+|+++|.-.++..+++. .|    .+|+.+.++++-.+...+.+...      -.++.+...|..+-      
T Consensus        80 ~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~------  153 (223)
T d1r18a_          80 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKG------  153 (223)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGC------
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEecccccc------
Confidence            568999999999988887666654 44    48999999988766554443321      24688888887531      


Q ss_pred             HHHHHHHcCCcccEEEECCCCC
Q 024230           88 INTVSSLFNGKLNIFVNNVGTS  109 (270)
Q Consensus        88 ~~~i~~~~~~~id~li~~ag~~  109 (270)
                         +.. . +++|.++..++..
T Consensus       154 ---~~~-~-~~fD~Iiv~~a~~  170 (223)
T d1r18a_         154 ---YPP-N-APYNAIHVGAAAP  170 (223)
T ss_dssp             ---CGG-G-CSEEEEEECSCBS
T ss_pred             ---ccc-c-cceeeEEEEeech
Confidence               011 1 6899999888763

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.64  E-value=1.1  Score=36.36  Aligned_cols=90  Identities=14%  Similarity=0.213  Sum_probs=56.7

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCC------------------
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSS------------------   80 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~------------------   80 (270)
                      +....+|+.++|-.|.++|..-+..|.+++++-...... ...+.++..|.++..+..+...                  
T Consensus        95 ~~~~~vv~aSsGN~g~a~A~~a~~~Gi~~~iv~p~~~~~-~k~~~i~~~GA~vv~v~~~~~~~~~~~~~~~~~~~~~~~~  173 (355)
T d1jbqa_          95 KPGDTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSS-EKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIP  173 (355)
T ss_dssp             CTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEECSCCCH-HHHHHHHHTTCEEEECCC-------CCHHHHHHHHHHHST
T ss_pred             ccCceEEEecccchhhHHHHHHHhccCCeEEEeeccchH-HHHHHHHhcCCeEEEecccccchhhhhhhhHHHHHHHhcc
Confidence            345679999999999999999999999866664333222 2344566777776554322110                  


Q ss_pred             --------------HHHHHHHHHHHHHHcCCcccEEEECCCCC
Q 024230           81 --------------RPQRQTLINTVSSLFNGKLNIFVNNVGTS  109 (270)
Q Consensus        81 --------------~~~~~~~~~~i~~~~~~~id~li~~ag~~  109 (270)
                                    ......+..|+.+++++++|.+|.++|..
T Consensus       174 ~~~~~~~~~~~~~~~ag~~t~~~EI~~ql~~~~d~vv~~vG~G  216 (355)
T d1jbqa_         174 NSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGTG  216 (355)
T ss_dssp             TEECCCTTTCTHHHHHHHHTHHHHHHHHHTTCCCEEEEECSSS
T ss_pred             ccccccccCcccchhhhcccchhhhhhhcCCCCCeeEecccCC
Confidence                          11234455666666655678888777754

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=88.63  E-value=0.78  Score=36.69  Aligned_cols=74  Identities=15%  Similarity=0.105  Sum_probs=52.2

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMK--GLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      .++||+||-.|++.|+   ++..+++.|+ +|+.++.++. .....+.+...  ..++.++..|+.+.+.          
T Consensus        31 ~~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~~~~~----------   96 (316)
T d1oria_          31 LFKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKVEEVEL----------   96 (316)
T ss_dssp             HHTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTTTCCC----------
T ss_pred             cCCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH-HhhhhhHHHHhCCccccceEeccHHHccc----------
Confidence            4589999999999885   5667888896 5999998764 34444444443  3568889988876421          


Q ss_pred             HcCCcccEEEEC
Q 024230           94 LFNGKLNIFVNN  105 (270)
Q Consensus        94 ~~~~~id~li~~  105 (270)
                       -..++|+++..
T Consensus        97 -~~~~~D~ivs~  107 (316)
T d1oria_          97 -PVEKVDIIISE  107 (316)
T ss_dssp             -SSSCEEEEEEC
T ss_pred             -ccceeEEEeee
Confidence             01578999875

>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: YxiM C-terminal domain-like
domain: Hypothetical protein YxiM
species: Bacillus subtilis [TaxId: 1423]

Probab=88.63  E-value=0.97  Score=33.16  Aligned_cols=83  Identities=11%  Similarity=0.121  Sum_probs=47.6

Q ss_pred             CCCCEEEEecCCCc-------------HHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHH
Q 024230           18 LQGMTALVTGGTKG-------------LGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQR   84 (270)
Q Consensus        18 l~gk~vlItG~s~g-------------iG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   84 (270)
                      +++|++++.|-|-.             -+..++++|-..+.+|+-.+..-.........                     
T Consensus         1 ~~~~ti~~~GDS~~~g~~~~~~~~~~Gw~~~L~~~l~~~~~~v~N~gi~G~t~~~~~~~---------------------   59 (208)
T d2o14a2           1 VTNRTIYVGGDSTVCNYYPLNSSKQAGWGQMLPHYIDKHTFQVRNMASGGQIARGFRND---------------------   59 (208)
T ss_dssp             CCCCEEEEEECTTTSCCSSTTTCSBCCHHHHGGGTSCTTTCEEEECCCTTCCHHHHHHS---------------------
T ss_pred             CCCCEEEEEEcccccCcCCCCCCCCCCHHHHHHHHhCCCceEEEeCeechhhhccHhhh---------------------
Confidence            57899999999833             45566666656677776655554433221110                     


Q ss_pred             HHHHHHHHHHcCCcccEEEECCCCCCCCCCCCCCHHHHH
Q 024230           85 QTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFS  123 (270)
Q Consensus        85 ~~~~~~i~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~  123 (270)
                       ..+..+.... .+.|++|...|..........+.+.+.
T Consensus        60 -~~~~~~~~~~-~~~D~vvi~~G~ND~~~~~~~~~~~~~   96 (208)
T d2o14a2          60 -GQLEAILKYI-KPGDYFMLQLGINDTNPKHKESEAEFK   96 (208)
T ss_dssp             -SHHHHHHTTC-CTTCEEEEECCTGGGCGGGCCCHHHHH
T ss_pred             -hhHHHHHHhc-CCCCEEEEEcCCCcccccccccHHHHH
Confidence             0122222333 467999988887654433445565544

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=88.59  E-value=0.59  Score=31.87  Aligned_cols=77  Identities=9%  Similarity=-0.026  Sum_probs=50.6

Q ss_pred             CCCEEEEecCCC----------cHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHH
Q 024230           19 QGMTALVTGGTK----------GLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLI   88 (270)
Q Consensus        19 ~gk~vlItG~s~----------giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   88 (270)
                      ..|+|||.|++.          --+-+.++.|.+.|++++++..|++...--.    ....++++.+.   ..+.+.+++
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~----d~aD~lYfepl---t~e~v~~Ii   75 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDY----DTSDRLYFEPV---TLEDVLEIV   75 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTST----TSSSEEECCCC---SHHHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcCh----hhcCceEEccC---CHHHHHHHH
Confidence            457899999863          4466899999999999999999988642100    11345554333   344555544


Q ss_pred             HHHHHHcCCcccEEEECCCC
Q 024230           89 NTVSSLFNGKLNIFVNNVGT  108 (270)
Q Consensus        89 ~~i~~~~~~~id~li~~ag~  108 (270)
                      +.      .++|.++-..|.
T Consensus        76 ~~------E~p~~ii~~~GG   89 (121)
T d1a9xa4          76 RI------EKPKGVIVQYGG   89 (121)
T ss_dssp             HH------HCCSEEECSSST
T ss_pred             HH------hCCCEEEeehhh
Confidence            33      467888777664

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=88.51  E-value=0.21  Score=39.56  Aligned_cols=32  Identities=16%  Similarity=0.264  Sum_probs=26.8

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCCh
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTE   54 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~   54 (270)
                      .|+|+|| |-+|.++|.+|+++|. +|.++++++
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            3677776 5899999999999997 599998864

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=88.41  E-value=0.58  Score=33.94  Aligned_cols=35  Identities=11%  Similarity=0.013  Sum_probs=24.2

Q ss_pred             EEEEecC-CCcHHHHHHHHHHHCC----CeEEEeeCChhH
Q 024230           22 TALVTGG-TKGLGLAVVEELSMLG----ATVHTCSRTETE   56 (270)
Q Consensus        22 ~vlItG~-s~giG~~la~~l~~~G----~~v~l~~r~~~~   56 (270)
                      ++.|.|| +.+.+..++..++..-    .++++++.+++.
T Consensus         3 KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~   42 (169)
T d1s6ya1           3 KIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGK   42 (169)
T ss_dssp             EEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGH
T ss_pred             EEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccH
Confidence            4667776 5567777766666542    389999998754

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=88.40  E-value=0.66  Score=34.85  Aligned_cols=78  Identities=9%  Similarity=0.196  Sum_probs=55.1

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      .|.+||=.|+++|.-......+...| +|+.++.+++..+.+.+..+.. .++.++..|..+.+.....+        ..
T Consensus        56 pg~~VLDlGcG~G~~~~~la~~v~~g-~V~gvDis~~~i~~a~~~a~~~-~ni~~i~~d~~~~~~~~~~~--------~~  125 (209)
T d1nt2a_          56 GDERVLYLGAASGTTVSHLADIVDEG-IIYAVEYSAKPFEKLLELVRER-NNIIPLLFDASKPWKYSGIV--------EK  125 (209)
T ss_dssp             SSCEEEEETCTTSHHHHHHHHHTTTS-EEEEECCCHHHHHHHHHHHHHC-SSEEEECSCTTCGGGTTTTC--------CC
T ss_pred             CCCEEEEeCCcCCHHHHHHHHhccCC-eEEEEeCCHHHHHHHHHHhhcc-CCceEEEeeccCcccccccc--------ce
Confidence            37899999999886554333444555 8999999999988877766654 47888888888765533222        46


Q ss_pred             ccEEEECC
Q 024230           99 LNIFVNNV  106 (270)
Q Consensus        99 id~li~~a  106 (270)
                      +|++++..
T Consensus       126 vd~v~~~~  133 (209)
T d1nt2a_         126 VDLIYQDI  133 (209)
T ss_dssp             EEEEEECC
T ss_pred             EEEEEecc
Confidence            77776653

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=88.38  E-value=1.5  Score=32.00  Aligned_cols=77  Identities=10%  Similarity=0.085  Sum_probs=55.9

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcC---CeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG---LKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      ...+++||=.|++.|   .++..+++.+.+|.+++.++...+...+.+...+   .++.++..|+.+.      +.    
T Consensus        50 ~~~~~~VLDiGcG~G---~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~------~~----  116 (194)
T d1dusa_          50 VDKDDDILDLGCGYG---VIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN------VK----  116 (194)
T ss_dssp             CCTTCEEEEETCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT------CT----
T ss_pred             cCCCCeEEEEeecCC---hhHHHHHhhccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhh------hc----
Confidence            346889998888877   3455667788899999999888877776666543   4588888888642      11    


Q ss_pred             HcCCcccEEEECCCC
Q 024230           94 LFNGKLNIFVNNVGT  108 (270)
Q Consensus        94 ~~~~~id~li~~ag~  108 (270)
                        ++++|.++.+.-.
T Consensus       117 --~~~fD~Ii~~~p~  129 (194)
T d1dusa_         117 --DRKYNKIITNPPI  129 (194)
T ss_dssp             --TSCEEEEEECCCS
T ss_pred             --cCCceEEEEcccE
Confidence              1579999987643

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.17  E-value=0.2  Score=39.37  Aligned_cols=34  Identities=18%  Similarity=0.186  Sum_probs=30.0

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhH
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETE   56 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~   56 (270)
                      .|+|+||+ -.|..+|..|+++|.+|.++.++++.
T Consensus         4 ~V~IvGaG-p~Gl~~A~~L~~~G~~v~vlE~~~~~   37 (292)
T d1k0ia1           4 QVAIIGAG-PSGLLLGQLLHKAGIDNVILERQTPD   37 (292)
T ss_dssp             SEEEECCS-HHHHHHHHHHHHHTCCEEEECSSCHH
T ss_pred             CEEEECcC-HHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence            58888886 89999999999999999999997653

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=87.85  E-value=0.24  Score=39.28  Aligned_cols=46  Identities=13%  Similarity=0.052  Sum_probs=36.6

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK   67 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~   67 (270)
                      .+++||=.|++.|.   ++..|+++|++|+.++.+++-++.+.+.....
T Consensus        56 ~~~~vLD~GcG~G~---~~~~la~~g~~v~gvD~S~~ml~~A~~~~~~~  101 (292)
T d1xvaa_          56 GCHRVLDVACGTGV---DSIMLVEEGFSVTSVDASDKMLKYALKERWNR  101 (292)
T ss_dssp             TCCEEEESSCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT
T ss_pred             CCCEEEEecCCCcH---HHHHHHHcCCeeeeccCchHHHHHHHHHHHhc
Confidence            36799999998776   46667889999999999999887766655544

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=87.84  E-value=1.3  Score=33.11  Aligned_cols=79  Identities=15%  Similarity=0.148  Sum_probs=56.9

Q ss_pred             CCC-CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcC-CeEEEEEccCCCHHHHHHHHHHHHHH
Q 024230           17 SLQ-GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG-LKVTGSVCDVSSRPQRQTLINTVSSL   94 (270)
Q Consensus        17 ~l~-gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~i~~~   94 (270)
                      .++ +++||=.|++.|.-   +..++++|++|+.++.+++..+...+.+...+ .++.++..|..+..     +      
T Consensus        12 ~l~~~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l~-----~------   77 (231)
T d1vl5a_          12 ALKGNEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP-----F------   77 (231)
T ss_dssp             TCCSCCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC-----S------
T ss_pred             CCCCcCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhccccccccccccccccccccc-----c------
Confidence            444 58999999988754   46678889999999999988777666665554 56888888887631     0      


Q ss_pred             cCCcccEEEECCCCC
Q 024230           95 FNGKLNIFVNNVGTS  109 (270)
Q Consensus        95 ~~~~id~li~~ag~~  109 (270)
                      -.+.+|.++......
T Consensus        78 ~~~~fD~v~~~~~l~   92 (231)
T d1vl5a_          78 TDERFHIVTCRIAAH   92 (231)
T ss_dssp             CTTCEEEEEEESCGG
T ss_pred             ccccccccccccccc
Confidence            015789998776653

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=87.66  E-value=0.36  Score=35.73  Aligned_cols=37  Identities=22%  Similarity=0.243  Sum_probs=30.3

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHH
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNEC   60 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~   60 (270)
                      +|.|.| .|-+|..+|..|+ +|++|+.+|-+++..+.+
T Consensus         2 kI~ViG-lG~vGl~~a~~~a-~g~~V~g~Din~~~v~~l   38 (196)
T d1dlja2           2 KIAVAG-SGYVGLSLGVLLS-LQNEVTIVDILPSKVDKI   38 (196)
T ss_dssp             EEEEEC-CSHHHHHHHHHHT-TTSEEEEECSCHHHHHHH
T ss_pred             EEEEEC-CChhHHHHHHHHH-CCCcEEEEECCHHHHHHH
Confidence            567775 7999999998775 699999999998876543

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=87.42  E-value=0.24  Score=37.35  Aligned_cols=38  Identities=21%  Similarity=0.271  Sum_probs=32.5

Q ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh
Q 024230           16 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTE   54 (270)
Q Consensus        16 ~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~   54 (270)
                      .+++||+|+|.|++. -|-.+|..+++.+++++.+.|+.
T Consensus        28 ~~~~gK~V~VvG~G~-Sa~dia~~~~~~~~~~~~~~~~~   65 (235)
T d1w4xa2          28 VDFSGQRVGVIGTGS-SGIQVSPQIAKQAAELFVFQRTP   65 (235)
T ss_dssp             CCCBTCEEEEECCSH-HHHHHHHHHHHHBSEEEEEESSC
T ss_pred             CCCCCCEEEEECCCc-cHHHHHHHHHhhhcccccccccc
Confidence            478999999998765 58999999999999988887753

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=87.20  E-value=0.43  Score=33.66  Aligned_cols=35  Identities=26%  Similarity=0.321  Sum_probs=28.0

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCC---eEEEeeCChh
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGA---TVHTCSRTET   55 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~---~v~l~~r~~~   55 (270)
                      .+|.|.||+|-+|+.+.+.|.++++   ++..++.+..
T Consensus         3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~   40 (144)
T d2hjsa1           3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAES   40 (144)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeeccc
Confidence            5799999999999999999987654   6776655443

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.53  E-value=1.5  Score=30.20  Aligned_cols=34  Identities=24%  Similarity=0.231  Sum_probs=27.1

Q ss_pred             CCEEEEecCCCcHHHHHHHHHH----HCCCeEEEeeCCh
Q 024230           20 GMTALVTGGTKGLGLAVVEELS----MLGATVHTCSRTE   54 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~----~~G~~v~l~~r~~   54 (270)
                      +|+++|.|| |.+|..+|..|+    +.|.+|.++.+.+
T Consensus        37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~   74 (137)
T d1m6ia2          37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEK   74 (137)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEecccc
Confidence            688999976 889988888886    4588999887744

>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Escherichia coli [TaxId: 562]

Probab=86.50  E-value=1.2  Score=34.95  Aligned_cols=78  Identities=15%  Similarity=0.077  Sum_probs=56.2

Q ss_pred             CCCEEEEecCC-CcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCC-eEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           19 QGMTALVTGGT-KGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGL-KVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        19 ~gk~vlItG~s-~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      ++.+++=.|.+ |-||.+++..+  ..++|+.++.+++.++-..+.++..+. ++.++..|+.+.-            .+
T Consensus       108 ~~~~vlDlGtGSG~I~i~la~~~--p~~~v~avDis~~Al~~A~~Na~~~~~~~v~~~~~d~~~~~------------~~  173 (274)
T d2b3ta1         108 QPCRILDLGTGTGAIALALASER--PDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSAL------------AG  173 (274)
T ss_dssp             SCCEEEEETCTTSHHHHHHHHHC--TTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGG------------TT
T ss_pred             cccceeeeehhhhHHHHHHHhhC--CcceeeeccchhHHHhHHHHHHHHhCcccceeeeccccccc------------CC
Confidence            44556655544 55666666653  457999999999998888888877765 5999999987531            12


Q ss_pred             CcccEEEECCCCCC
Q 024230           97 GKLNIFVNNVGTSV  110 (270)
Q Consensus        97 ~~id~li~~ag~~~  110 (270)
                      .++|++|.|.-+.+
T Consensus       174 ~~fDlIvsNPPYi~  187 (274)
T d2b3ta1         174 QQFAMIVSNPPYID  187 (274)
T ss_dssp             CCEEEEEECCCCBC
T ss_pred             CceeEEEecchhhh
Confidence            58999999977654

>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sporulation response regulator Spo0F
species: Bacillus subtilis [TaxId: 1423]

Probab=86.39  E-value=3.2  Score=27.59  Aligned_cols=81  Identities=6%  Similarity=0.096  Sum_probs=53.7

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcc
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKL   99 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   99 (270)
                      ||+|||+--...+-..+.+.|.+.|++|.......+.+    +.+++..-.+.+.-..+-+.+. -++++++++.. ..+
T Consensus         1 NkrILvVDD~~~~~~~l~~~L~~~g~~v~~a~~g~eal----~~~~~~~~dlillD~~mP~~~G-~el~~~lr~~~-~~~   74 (119)
T d1peya_           1 NEKILIVDDQSGIRILLNEVFNKEGYQTFQAANGLQAL----DIVTKERPDLVLLDMKIPGMDG-IEILKRMKVID-ENI   74 (119)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHH----HHHHHHCCSEEEEESCCTTCCH-HHHHHHHHHHC-TTC
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCEEEEeCCHHHHH----HHHHhCCCCEEEEeccCCCCCH-HHHHHHHHHhC-CCC
Confidence            68999999999999999999999999998765433332    3344434455544444445444 45667777665 355


Q ss_pred             cEEEECC
Q 024230          100 NIFVNNV  106 (270)
Q Consensus       100 d~li~~a  106 (270)
                      -+++..+
T Consensus        75 pvi~lt~   81 (119)
T d1peya_          75 RVIIMTA   81 (119)
T ss_dssp             EEEEEES
T ss_pred             cEEEEec
Confidence            5666554

>d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=86.36  E-value=2.4  Score=30.14  Aligned_cols=37  Identities=16%  Similarity=0.317  Sum_probs=33.9

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCC
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRT   53 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~   53 (270)
                      +|+|++|+++|-.+.+..+++..+...|.++.+++..
T Consensus         1 sl~gl~Ia~VGD~~nv~~Sli~~l~~~g~~v~~~~P~   37 (163)
T d1pvva2           1 TIKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPE   37 (163)
T ss_dssp             CCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCT
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEeccc
Confidence            5899999999999999999999999999999998753

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.34  E-value=1.5  Score=35.00  Aligned_cols=75  Identities=15%  Similarity=0.100  Sum_probs=52.2

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMK--GLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      .++||+||-.|++.|+   ++..++++|+ +|+.++.++ ..+...+.....  ..++.++..|+.+.+           
T Consensus        36 ~~~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~l~-----------  100 (328)
T d1g6q1_          36 LFKDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDVH-----------  100 (328)
T ss_dssp             HHTTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSC-----------
T ss_pred             cCCcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhhcc-----------
Confidence            4689999999999885   4667788897 699999775 344444444443  356888998887632           


Q ss_pred             HcCCcccEEEECC
Q 024230           94 LFNGKLNIFVNNV  106 (270)
Q Consensus        94 ~~~~~id~li~~a  106 (270)
                      .-..++|+++...
T Consensus       101 ~~~~~~D~i~se~  113 (328)
T d1g6q1_         101 LPFPKVDIIISEW  113 (328)
T ss_dssp             CSSSCEEEEEECC
T ss_pred             CcccceeEEEEEe
Confidence            0115799998754

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.09  E-value=0.53  Score=36.90  Aligned_cols=34  Identities=21%  Similarity=0.282  Sum_probs=27.8

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRT   53 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~   53 (270)
                      +.++|+|+|| |--|...|.+|+++|++|.++..+
T Consensus         4 ~~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~   37 (449)
T d2dw4a2           4 KTGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEAR   37 (449)
T ss_dssp             CCCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCC
Confidence            3456888887 567889999999999999998553

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=86.06  E-value=2  Score=29.39  Aligned_cols=89  Identities=15%  Similarity=0.148  Sum_probs=53.0

Q ss_pred             CCCCCEEEEecCC---CcHHHHHHHHHHHCC-CeEEEeeCChhHH--HHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Q 024230           17 SLQGMTALVTGGT---KGLGLAVVEELSMLG-ATVHTCSRTETEL--NECIHHLQMKGLKVTGSVCDVSSRPQRQTLINT   90 (270)
Q Consensus        17 ~l~gk~vlItG~s---~giG~~la~~l~~~G-~~v~l~~r~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   90 (270)
                      -++.|+|.|+|+|   +..|..+.+.|.+.| .+|+.+..+.++.  ......+.+....+..... ....+.+.+++++
T Consensus         5 lf~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i~G~~~y~sl~dlp~~vDlvvi-~vp~~~~~~~~~~   83 (129)
T d2csua1           5 FFNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQGVKAYKSVKDIPDEIDLAII-VVPKRFVKDTLIQ   83 (129)
T ss_dssp             TTSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEETTEECBSSTTSCSSCCSEEEE-CSCHHHHHHHHHH
T ss_pred             hCCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccccCCeEeecchhhcCCCCceEEE-ecChHHhHHHHHH
Confidence            4678999999999   889999999987766 5899887765432  1111122221111111111 1246777888888


Q ss_pred             HHHHcCCcccEEEECCCC
Q 024230           91 VSSLFNGKLNIFVNNVGT  108 (270)
Q Consensus        91 i~~~~~~~id~li~~ag~  108 (270)
                      +.+.  +---+++...|+
T Consensus        84 ~~~~--g~~~~vi~s~Gf   99 (129)
T d2csua1          84 CGEK--GVKGVVIITAGF   99 (129)
T ss_dssp             HHHH--TCCEEEECCCSS
T ss_pred             HHHc--CCCEEEEecccc
Confidence            8765  322344455554

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=85.98  E-value=0.32  Score=35.17  Aligned_cols=31  Identities=16%  Similarity=0.085  Sum_probs=25.2

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEe
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTC   50 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~   50 (270)
                      .+++|+|.|| |.+|..+|..|.+.|.+|.++
T Consensus         2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~   32 (185)
T d1q1ra1           2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIR   32 (185)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEE
T ss_pred             CCCCEEEECC-cHHHHHHHHHHHHcCCceEEE
Confidence            4678888876 789999999999999875443

>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=85.96  E-value=2.9  Score=32.95  Aligned_cols=57  Identities=11%  Similarity=-0.004  Sum_probs=39.0

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCC
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVS   79 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~   79 (270)
                      ..+|+..+|..|.++|..-+..|.+++++-..... +...+.++..|.++..+..+..
T Consensus        70 ~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~-~~k~~~l~~~Ga~vi~~~~~~~  126 (318)
T d1v71a1          70 AGVLTFSSGNHAQAIALSAKILGIPAKIIMPLDAP-EAKVAATKGYGGQVIMYDRYKD  126 (318)
T ss_dssp             HCEEECCSSHHHHHHHHHHHHTTCCEEEEEETTCC-HHHHHHHHHTTCEEEEECTTTT
T ss_pred             ceeeeeccchhhHHHHHhhcccccceeeccccccc-HHHHHHHHHcCCcEEeccCCch
Confidence            45889999999999999999999986555433222 2334456677777766544443

>d1c4oa2 c.37.1.19 (A:410-583) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: Nucleotide excision repair enzyme UvrB
species: Thermus thermophilus [TaxId: 274]

Probab=85.75  E-value=3  Score=30.09  Aligned_cols=66  Identities=18%  Similarity=0.128  Sum_probs=51.4

Q ss_pred             HHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcccEEEECCCC
Q 024230           39 ELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGT  108 (270)
Q Consensus        39 ~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~li~~ag~  108 (270)
                      ....+|.+++++..+.+..+.+.+.+...|-++.++..++.+.+ =++.++.+..   |++++||...-.
T Consensus        26 ~~~~~g~r~lvfc~t~~~~~~l~~~L~~~Gi~a~~~Hg~~~~~e-R~~~l~~F~~---G~~~vLVaT~v~   91 (174)
T d1c4oa2          26 ERAARGERTLVTVLTVRMAEELTSFLVEHGIRARYLHHELDAFK-RQALIRDLRL---GHYDCLVGINLL   91 (174)
T ss_dssp             HHHHTTCEEEEECSSHHHHHHHHHHHHHTTCCEEEECTTCCHHH-HHHHHHHHHT---TSCSEEEESCCC
T ss_pred             HHHhcCCcEEEEEcchhHHHHHHHHHHhcCCceEEEecccchHH-HHHHHHHHHC---CCeEEEEeeeee
Confidence            34457889999999999999999999999999999999997533 3444544443   899999987543

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=85.36  E-value=1.3  Score=35.37  Aligned_cols=78  Identities=17%  Similarity=0.199  Sum_probs=43.7

Q ss_pred             EEEEecCCCcHHH---HHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCC----------------HH
Q 024230           22 TALVTGGTKGLGL---AVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSS----------------RP   82 (270)
Q Consensus        22 ~vlItG~s~giG~---~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~----------------~~   82 (270)
                      +++.++||+|==.   ++|++|+++|++|.+++...  ..+   .++..|-.+..+..+...                ..
T Consensus         3 il~~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~~~~--~~~---~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (391)
T d1pn3a_           3 VLITGCGSRGDTEPLVALAARLRELGADARMCLPPD--YVE---RCAEVGVPMVPVGRAVRAGAREPGELPPGAAEVVTE   77 (391)
T ss_dssp             EEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEECGG--GHH---HHHHHTCCEEECSSCSSGGGSCTTCCCTTCGGGHHH
T ss_pred             EEEEcCCChhHHHHHHHHHHHHHHCCCEEEEEEChh--hHh---HHHHCCCeEEECCccHHHHhhChhhhhHHHHHHHHH
Confidence            4444666654433   59999999999999887422  222   233344444443333221                22


Q ss_pred             HHHHHHHHHHHHcCCcccEEEEC
Q 024230           83 QRQTLINTVSSLFNGKLNIFVNN  105 (270)
Q Consensus        83 ~~~~~~~~i~~~~~~~id~li~~  105 (270)
                      .+...++.+.... ..+|.+|..
T Consensus        78 ~~~~~~~~l~~~~-~~~D~vi~~   99 (391)
T d1pn3a_          78 VVAEWFDKVPAAI-EGCDAVVTT   99 (391)
T ss_dssp             HHHHHHHHHHHHH-TTCSEEEEE
T ss_pred             HHHHHHHHHHHHh-cCCCeEEEc
Confidence            3444555555555 467888764

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=85.03  E-value=0.64  Score=32.87  Aligned_cols=35  Identities=9%  Similarity=-0.045  Sum_probs=27.1

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCC-C---eEEEeeCChh
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLG-A---TVHTCSRTET   55 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G-~---~v~l~~r~~~   55 (270)
                      |+|.|.||||-+|+.+.+.|+++. +   ++++++++..
T Consensus         2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s   40 (146)
T d1t4ba1           2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQL   40 (146)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSST
T ss_pred             cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccc
Confidence            579999999999999998877764 2   5666665543

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.92  E-value=3.2  Score=31.08  Aligned_cols=78  Identities=9%  Similarity=0.003  Sum_probs=53.4

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCC-CeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc-
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLG-ATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF-   95 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G-~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~-   95 (270)
                      -+|++||=+|.+.|+   .+..+++++ .+|++++.++..++.+.+.....+..+..+..|..+          +...+ 
T Consensus        52 ~~g~~VLdIGcG~G~---~a~~~a~~~~~~v~~id~s~~~~~~a~~~~~~~~~~~~~~~~~~~~----------~~~~~~  118 (229)
T d1zx0a1          52 SKGGRVLEVGFGMAI---AASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWED----------VAPTLP  118 (229)
T ss_dssp             TTCEEEEEECCTTSH---HHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHH----------HGGGSC
T ss_pred             cCCCeEEEeeccchH---HHHHHHHcCCCeEEEeCCCHHHHHHHHHHhhhcccccccccccccc----------cccccc
Confidence            478999999998885   556677765 679999999998877777666656666665554211          11111 


Q ss_pred             CCcccEEEECCCC
Q 024230           96 NGKLNIFVNNVGT  108 (270)
Q Consensus        96 ~~~id~li~~ag~  108 (270)
                      .+++|.++..+-.
T Consensus       119 ~~~fD~i~fD~~~  131 (229)
T d1zx0a1         119 DGHFDGILYDTYP  131 (229)
T ss_dssp             TTCEEEEEECCCC
T ss_pred             cccccceeecccc
Confidence            2578998866543

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=84.33  E-value=0.45  Score=36.18  Aligned_cols=33  Identities=24%  Similarity=0.247  Sum_probs=28.0

Q ss_pred             EEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhH
Q 024230           23 ALVTGGTKGLGLAVVEELSMLGATVHTCSRTETE   56 (270)
Q Consensus        23 vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~   56 (270)
                      |+|+|| |--|..+|..|+++|++|+++.+++..
T Consensus         5 ViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~~   37 (251)
T d2i0za1           5 VIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNKL   37 (251)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence            677776 478999999999999999999987653

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=84.20  E-value=2.1  Score=32.08  Aligned_cols=76  Identities=16%  Similarity=0.096  Sum_probs=55.8

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcC-CeEEEEEccCCCHHHHHHHHHHHHHHcCC
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG-LKVTGSVCDVSSRPQRQTLINTVSSLFNG   97 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   97 (270)
                      .|.+||=.|++.|.   ++..|+++|++|+.++.++.-++...+.++..+ .++.++..|..+..     +.      ++
T Consensus        16 ~~~rILDiGcGtG~---~~~~la~~~~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~~~-----~~------~~   81 (234)
T d1xxla_          16 AEHRVLDIGAGAGH---TALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP-----FP------DD   81 (234)
T ss_dssp             TTCEEEEESCTTSH---HHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC-----SC------TT
T ss_pred             CCCEEEEeCCcCcH---HHHHHHHhCCeEEEEeCChhhhhhhhhhhccccccccccccccccccc-----cc------cc
Confidence            46789999998884   445677889999999999998877777666654 46888888886521     00      16


Q ss_pred             cccEEEECCCC
Q 024230           98 KLNIFVNNVGT  108 (270)
Q Consensus        98 ~id~li~~ag~  108 (270)
                      ++|.++.+-..
T Consensus        82 ~fD~v~~~~~l   92 (234)
T d1xxla_          82 SFDIITCRYAA   92 (234)
T ss_dssp             CEEEEEEESCG
T ss_pred             ccceeeeecee
Confidence            78988876554

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.07  E-value=0.31  Score=42.36  Aligned_cols=35  Identities=11%  Similarity=0.258  Sum_probs=30.4

Q ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeC
Q 024230           17 SLQGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSR   52 (270)
Q Consensus        17 ~l~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r   52 (270)
                      .|++.+|+|.|+ ||+|..+++-|+..|. ++.++|.
T Consensus        22 ~L~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~   57 (529)
T d1yova1          22 ALESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDG   57 (529)
T ss_dssp             HHHHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECC
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcC
Confidence            567789999986 7999999999999996 6888865

>d7reqa2 c.23.6.1 (A:561-728) Methylmalonyl-CoA mutase alpha subunit, C-terminal domain {Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Cobalamin (vitamin B12)-binding domain
family: Cobalamin (vitamin B12)-binding domain
domain: Methylmalonyl-CoA mutase alpha subunit, C-terminal domain
species: Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]

Probab=83.94  E-value=2.5  Score=30.38  Aligned_cols=77  Identities=17%  Similarity=0.180  Sum_probs=52.6

Q ss_pred             CcHHHH-HHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEE-ccCCCHHHHHHHHHHHHHHcCCcccEEEECCC
Q 024230           30 KGLGLA-VVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSV-CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVG  107 (270)
Q Consensus        30 ~giG~~-la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~-~D~~~~~~~~~~~~~i~~~~~~~id~li~~ag  107 (270)
                      -.+|.. ++..|...|++|+-++.+... +++.+.+.+.+..+..+. .+-+..+.+.++++.+++.  +.-|++|.+.|
T Consensus        50 Hd~G~~~va~~l~~~G~eVi~lg~~~~~-e~iv~aa~~~~advI~iSs~~~~~~~~~~~l~~~L~~~--g~~~v~VivGG  126 (168)
T d7reqa2          50 HDRGQKVIATAYADLGFDVDVGPLFQTP-EETARQAVEADVHVVGVSSLAGGHLTLVPALRKELDKL--GRPDILITVGG  126 (168)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEECCTTBCH-HHHHHHHHHHTCSEEEEEECSSCHHHHHHHHHHHHHHT--TCTTSEEEEEE
T ss_pred             HHHHHHHHHHHHHhCCcceecCCCcCcH-HHHHHHHHccCCCEEEEecCcccchHHHHHHHHHHHhc--CCCCeEEEEeC
Confidence            567876 566667779999988765443 355555555555555444 5556778889999988876  45677777777


Q ss_pred             CC
Q 024230          108 TS  109 (270)
Q Consensus       108 ~~  109 (270)
                      ..
T Consensus       127 ~i  128 (168)
T d7reqa2         127 VI  128 (168)
T ss_dssp             SC
T ss_pred             CC
Confidence            64

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=83.42  E-value=1.7  Score=31.71  Aligned_cols=76  Identities=11%  Similarity=0.057  Sum_probs=49.8

Q ss_pred             EecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCcccEEEE
Q 024230           25 VTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVN  104 (270)
Q Consensus        25 ItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~li~  104 (270)
                      +.-++-|-|.+. +.+++++.+|+.++|+++..+...+ .  ...++.++..+.++.++   .+....  . +++|.++.
T Consensus        22 ~vD~T~G~GGhs-~~iL~~~~~viaiD~D~~ai~~a~~-~--~~~~~~~~~~~f~~~~~---~l~~~~--~-~~vdgIl~   91 (182)
T d1wg8a2          22 YVDATLGGAGHA-RGILERGGRVIGLDQDPEAVARAKG-L--HLPGLTVVQGNFRHLKR---HLAALG--V-ERVDGILA   91 (182)
T ss_dssp             EEETTCTTSHHH-HHHHHTTCEEEEEESCHHHHHHHHH-T--CCTTEEEEESCGGGHHH---HHHHTT--C-SCEEEEEE
T ss_pred             EEEeCCCCcHHH-HHHhcccCcEEEEhhhhhHHHHHhh-c--cccceeEeehHHHHHHH---HHHHcC--C-CccCEEEE
Confidence            344555555554 4555667799999999988755433 2  33568888888887443   332211  1 57999999


Q ss_pred             CCCCCC
Q 024230          105 NVGTSV  110 (270)
Q Consensus       105 ~ag~~~  110 (270)
                      .-|+..
T Consensus        92 DLGvSs   97 (182)
T d1wg8a2          92 DLGVSS   97 (182)
T ss_dssp             ECSCCH
T ss_pred             EccCCH
Confidence            988853

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=83.31  E-value=2  Score=30.94  Aligned_cols=41  Identities=17%  Similarity=0.178  Sum_probs=30.3

Q ss_pred             EEEEecCCCcHHHHHHHHHHHC-CCeEE-EeeCChhHHHHHHHH
Q 024230           22 TALVTGGTKGLGLAVVEELSML-GATVH-TCSRTETELNECIHH   63 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~-G~~v~-l~~r~~~~~~~~~~~   63 (270)
                      ++.|+|. |.+|+..++.|... +.+|+ ++++++++.+++.+.
T Consensus         3 ki~iIG~-G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~   45 (184)
T d1ydwa1           3 RIGVMGC-ADIARKVSRAIHLAPNATISGVASRSLEKAKAFATA   45 (184)
T ss_dssp             EEEEESC-CTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHH
T ss_pred             EEEEEcC-CHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhc
Confidence            5778885 68999999888776 55655 568888877665543

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=83.27  E-value=0.65  Score=36.86  Aligned_cols=33  Identities=30%  Similarity=0.345  Sum_probs=23.9

Q ss_pred             CEEEEecCCC-cH---HHHHHHHHHHCCCeEEEeeCC
Q 024230           21 MTALVTGGTK-GL---GLAVVEELSMLGATVHTCSRT   53 (270)
Q Consensus        21 k~vlItG~s~-gi---G~~la~~l~~~G~~v~l~~r~   53 (270)
                      |+|+|++|++ |-   ..+++++|.++|++|..++..
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            6777776543 32   446999999999999887654

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=82.93  E-value=3.2  Score=30.75  Aligned_cols=86  Identities=12%  Similarity=0.156  Sum_probs=59.0

Q ss_pred             CCCCEEEEecCCCcH-HHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcC--CeEEEEEccCC---------------
Q 024230           18 LQGMTALVTGGTKGL-GLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG--LKVTGSVCDVS---------------   79 (270)
Q Consensus        18 l~gk~vlItG~s~gi-G~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~---------------   79 (270)
                      -.+.+||=.|.+.|- ...+++++...|++|+.++.+++-++...+.+...+  .++.....|..               
T Consensus        38 ~~~~~vLDlGCGtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~i~~~~~  117 (225)
T d1im8a_          38 TADSNVYDLGCSRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDIRHVEIKNASMVILNFT  117 (225)
T ss_dssp             CTTCEEEEESCTTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCTTTCCCCSEEEEEEESC
T ss_pred             CCCCEEEEeccchhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccchhhccccccceeeEEeee
Confidence            356789999987765 445666666679999999999998888777665532  23444444443               


Q ss_pred             ----CHHHHHHHHHHHHHHcCCcccEEEEC
Q 024230           80 ----SRPQRQTLINTVSSLFNGKLNIFVNN  105 (270)
Q Consensus        80 ----~~~~~~~~~~~i~~~~~~~id~li~~  105 (270)
                          +.++..++++++.+.+  ++++.+..
T Consensus       118 l~~~~~~d~~~~l~~i~~~L--kpgG~li~  145 (225)
T d1im8a_         118 LQFLPPEDRIALLTKIYEGL--NPNGVLVL  145 (225)
T ss_dssp             GGGSCGGGHHHHHHHHHHHE--EEEEEEEE
T ss_pred             ccccChhhHHHHHHHHHHhC--CCCceeec
Confidence                2456778888888876  45554443

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=82.89  E-value=2.4  Score=33.06  Aligned_cols=90  Identities=13%  Similarity=0.152  Sum_probs=50.7

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCC-------------------
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVS-------------------   79 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-------------------   79 (270)
                      .+...+|+-.+|-.|.++|..-+..|.+++++...... +...+.++..|.++..+..+-.                   
T Consensus        58 ~~~~~vv~aSsGN~g~a~A~~a~~~G~~~~i~~p~~~~-~~k~~~~~~~GA~v~~v~~~~~~~~a~~~~~~~~~~~~~~~  136 (292)
T d2bhsa1          58 KPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMS-QERRAAMRAYGAELILVTKEQGMEGARDLALEMANRGEGKL  136 (292)
T ss_dssp             CTTSEEEEECCSHHHHHHHHHHHHHTCEEEEEEESCCC-HHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHHTSSEE
T ss_pred             CCCceeeeecccchhHHHHHHHHhcCcceEeeeccCch-hhhhHHHHHhCCCcceeecccchHHHHHHHhhccccccccc
Confidence            44677899999999999998888878775444322111 1122334455555544433221                   


Q ss_pred             -----CHH----HHHHHHHHHHHHcCCcccEEEECCCCC
Q 024230           80 -----SRP----QRQTLINTVSSLFNGKLNIFVNNVGTS  109 (270)
Q Consensus        80 -----~~~----~~~~~~~~i~~~~~~~id~li~~ag~~  109 (270)
                           +.+    ....+..|+.+++++.+|.++...|..
T Consensus       137 ~~~~~~~~~~~~~~~~~a~Ei~~q~~~~~d~vv~~~G~G  175 (292)
T d2bhsa1         137 LDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTT  175 (292)
T ss_dssp             CCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSS
T ss_pred             cCCCchhcchhhHHHHHHHHhHHhcCCCCCcccccCCCc
Confidence                 111    122244566666655677777777653

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=82.69  E-value=6.4  Score=28.02  Aligned_cols=76  Identities=14%  Similarity=0.163  Sum_probs=45.1

Q ss_pred             CCEEEEecCCCcHHHH--HHHHHHHC----CCeEEEeeCChhHHHHHHHHHHh----cCCeEEEEEccCCCHHHHHHHHH
Q 024230           20 GMTALVTGGTKGLGLA--VVEELSML----GATVHTCSRTETELNECIHHLQM----KGLKVTGSVCDVSSRPQRQTLIN   89 (270)
Q Consensus        20 gk~vlItG~s~giG~~--la~~l~~~----G~~v~l~~r~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~   89 (270)
                      +.++.|.|| |.+|..  +...++..    +.++++++.++++++.....++.    .+....+...  +|   .++++ 
T Consensus         2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~--td---~~eaL-   74 (171)
T d1obba1           2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT--MN---LDDVI-   74 (171)
T ss_dssp             CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE--SC---HHHHH-
T ss_pred             CcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEe--CC---hhhcc-
Confidence            347888886 666654  44445443    45899999999987654444433    2333332222  12   22233 


Q ss_pred             HHHHHcCCcccEEEECCCCC
Q 024230           90 TVSSLFNGKLNIFVNNVGTS  109 (270)
Q Consensus        90 ~i~~~~~~~id~li~~ag~~  109 (270)
                             ...|++++.++..
T Consensus        75 -------~dad~Vv~~~~~g   87 (171)
T d1obba1          75 -------IDADFVINTAMVG   87 (171)
T ss_dssp             -------TTCSEEEECCCTT
T ss_pred             -------cCCCeEeeecccc
Confidence                   5789999998864

>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Catechol O-methyltransferase, COMT
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=82.59  E-value=1.5  Score=32.82  Aligned_cols=83  Identities=18%  Similarity=0.122  Sum_probs=56.0

Q ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcC--CeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           18 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKG--LKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        18 l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      .+.|+||=+|...|............|.+|+.++.+++..+.....++..|  .++.++..|..+      .+.++...+
T Consensus        55 ~kpk~ILEiGt~~G~Sti~la~al~~~g~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~~Gd~~e------~l~~l~~~~  128 (214)
T d2cl5a1          55 YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGLQDKVTILNGASQD------LIPQLKKKY  128 (214)
T ss_dssp             HCCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH------HGGGHHHHS
T ss_pred             hCCCEEEEEccCchhHHHHHHHhCCCccEEEEEeccHHHHHHHHHHHHHcCCCccceeeeccccc------cccchhhcc
Confidence            456899999998887654332223457899999999988877777776655  457777776643      344444433


Q ss_pred             C-CcccEEEECC
Q 024230           96 N-GKLNIFVNNV  106 (270)
Q Consensus        96 ~-~~id~li~~a  106 (270)
                      . +++|.++.-+
T Consensus       129 ~~~~~D~ifiD~  140 (214)
T d2cl5a1         129 DVDTLDMVFLDH  140 (214)
T ss_dssp             CCCCEEEEEECS
T ss_pred             cccccceeeecc
Confidence            2 4689888754

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=82.41  E-value=0.59  Score=35.05  Aligned_cols=32  Identities=22%  Similarity=0.316  Sum_probs=26.0

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCCh
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTE   54 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~   54 (270)
                      .|+|+|| |--|.++|.+|+++|. +|.++.+++
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGA-GMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            3677776 6778899999999996 699998764

>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Pyranose 2-oxidase
species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]

Probab=82.27  E-value=0.53  Score=37.95  Aligned_cols=29  Identities=21%  Similarity=0.276  Sum_probs=24.1

Q ss_pred             EEEecCCCcHHHHHHHHHHHCCCeEEEeeC
Q 024230           23 ALVTGGTKGLGLAVVEELSMLGATVHTCSR   52 (270)
Q Consensus        23 vlItG~s~giG~~la~~l~~~G~~v~l~~r   52 (270)
                      |+|+|++- -|..+|.+|++.|.+|+++.+
T Consensus         7 viIVGsG~-aG~v~A~~La~~G~kVlvLEa   35 (379)
T d2f5va1           7 VVIVGSGP-IGCTYARELVGAGYKVAMFDI   35 (379)
T ss_dssp             EEEECCSH-HHHHHHHHHHHTTCEEEEECS
T ss_pred             EEEECcCH-HHHHHHHHHhhCCCeEEEEec
Confidence            66777644 499999999999999999965

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=82.27  E-value=0.25  Score=35.03  Aligned_cols=37  Identities=19%  Similarity=-0.027  Sum_probs=26.3

Q ss_pred             CCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHH
Q 024230           28 GTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHL   64 (270)
Q Consensus        28 ~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~   64 (270)
                      |+|-+|+++++.|.+.+..+.+++|++++.+++.+..
T Consensus         6 G~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~   42 (153)
T d2i76a2           6 GTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVY   42 (153)
T ss_dssp             SCCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHT
T ss_pred             eCcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcc
Confidence            4577999999988765444568999999988876643

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=82.26  E-value=0.58  Score=35.91  Aligned_cols=37  Identities=19%  Similarity=0.293  Sum_probs=30.2

Q ss_pred             EEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHH
Q 024230           23 ALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNEC   60 (270)
Q Consensus        23 vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~   60 (270)
                      |+|+|| |.-|...|..++++|.+|.++.+++....++
T Consensus         7 ViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~~G~k~   43 (253)
T d2gqfa1           7 NIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKKIGRKI   43 (253)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSSCHHH
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecCCCCCCce
Confidence            667766 6788999999999999999999987654443

>d2b9ea1 c.66.1.38 (A:133-425) NOL1R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: NOL1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.04  E-value=8.2  Score=30.07  Aligned_cols=85  Identities=9%  Similarity=0.031  Sum_probs=51.5

Q ss_pred             CCCEEEEecCCCc-HHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCC-eEEEEEccCCCHHHHHHHHHHHHHHcC
Q 024230           19 QGMTALVTGGTKG-LGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGL-KVTGSVCDVSSRPQRQTLINTVSSLFN   96 (270)
Q Consensus        19 ~gk~vlItG~s~g-iG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~i~~~~~   96 (270)
                      .|.+||=.-++.| --.++|. +...+..|+.++.++.+++.+.+.++..|. ++.+...|..+....       ...+ 
T Consensus        94 ~g~~vLD~cAapGgKt~~la~-l~~~~~~i~a~d~~~~R~~~l~~~l~r~g~~~~~~~~~d~~~~~~~-------~~~~-  164 (293)
T d2b9ea1          94 PGSHVIDACAAPGNKTSHLAA-LLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPS-------DPRY-  164 (293)
T ss_dssp             TTCEEEESSCTTCHHHHHHHH-HHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTT-------CGGG-
T ss_pred             ccceEEecccchhhHHHHHHH-HhcCCceEeeecCCHHHHHHHHHHHHhcCccceeeeehhhhhhccc-------cccc-
Confidence            3556664444443 3444444 445566899999999999998888888774 466666665432210       0112 


Q ss_pred             CcccEEEECCCCCCCC
Q 024230           97 GKLNIFVNNVGTSVLK  112 (270)
Q Consensus        97 ~~id~li~~ag~~~~~  112 (270)
                      +++|.++.-|=-...+
T Consensus       165 ~~fD~VL~DaPCSg~G  180 (293)
T d2b9ea1         165 HEVHYILLDPSCSGSG  180 (293)
T ss_dssp             TTEEEEEECCCCCC--
T ss_pred             ceeeEEeecCcccchh
Confidence            5688888776544433

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=82.03  E-value=0.33  Score=35.78  Aligned_cols=35  Identities=3%  Similarity=-0.175  Sum_probs=29.5

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTE   54 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~   54 (270)
                      +++.|+|+||+ -.|.+.|..+++.|.+|+++.+..
T Consensus         4 ~~~~VvIIGgG-paGl~aA~~~ar~g~~v~vie~~~   38 (192)
T d1vdca1           4 HNTRLCIVGSG-PAAHTAAIYAARAELKPLLFEGWM   38 (192)
T ss_dssp             EEEEEEEECCS-HHHHHHHHHHHHTTCCCEEECCSS
T ss_pred             ccceEEEECCC-HHHHHHHHHHHHcCCcEEEEEeec
Confidence            46789999985 589999999999999999987543

>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Azotobacter vinelandii [TaxId: 354]

Probab=81.92  E-value=0.39  Score=37.85  Aligned_cols=33  Identities=21%  Similarity=0.365  Sum_probs=28.4

Q ss_pred             CEEEEecCCCcHHHH-----HHHHHHHCCCeEEEeeCCh
Q 024230           21 MTALVTGGTKGLGLA-----VVEELSMLGATVHTCSRTE   54 (270)
Q Consensus        21 k~vlItG~s~giG~~-----la~~l~~~G~~v~l~~r~~   54 (270)
                      |+|+|.| =||+|+.     +|..|+++|.+|.++|-++
T Consensus         3 r~Iaisg-KGGVGKTT~a~NLA~~LA~~G~rVLlID~Dp   40 (289)
T d2afhe1           3 RQCAIYG-KGGIGKSTTTQNLVAALAEMGKKVMIVGCDP   40 (289)
T ss_dssp             EEEEEEE-CTTSSHHHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred             cEEEEEC-CCCCCHHHHHHHHHHHHHHCCCCEEEEecCC
Confidence            5778887 8999996     6899999999999998765

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=81.76  E-value=0.61  Score=34.67  Aligned_cols=31  Identities=16%  Similarity=0.251  Sum_probs=27.0

Q ss_pred             EEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh
Q 024230           23 ALVTGGTKGLGLAVVEELSMLGATVHTCSRTE   54 (270)
Q Consensus        23 vlItG~s~giG~~la~~l~~~G~~v~l~~r~~   54 (270)
                      ++|+|| |..|.+.|..+++.|.+|+++.+.+
T Consensus         6 vvVIGg-GpaGl~aA~~aa~~G~kV~vie~~~   36 (221)
T d1dxla1           6 VVIIGG-GPGGYVAAIKAAQLGFKTTCIEKRG   36 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEecC
Confidence            678887 5779999999999999999998754

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=81.68  E-value=0.69  Score=34.34  Aligned_cols=31  Identities=23%  Similarity=0.369  Sum_probs=27.4

Q ss_pred             EEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh
Q 024230           23 ALVTGGTKGLGLAVVEELSMLGATVHTCSRTE   54 (270)
Q Consensus        23 vlItG~s~giG~~la~~l~~~G~~v~l~~r~~   54 (270)
                      ++|+|| |..|...|..+++.|.+|.++.+.+
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~~   35 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQKCALIEAKE   35 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEeccC
Confidence            577777 8899999999999999999998764

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=81.58  E-value=0.55  Score=37.22  Aligned_cols=33  Identities=18%  Similarity=0.282  Sum_probs=27.3

Q ss_pred             EEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChh
Q 024230           22 TALVTGGTKGLGLAVVEELSMLGATVHTCSRTET   55 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~   55 (270)
                      -|+|+|| |--|..+|++|+++|.+|.++.++..
T Consensus         3 dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~~   35 (298)
T d1i8ta1           3 DYIIVGS-GLFGAVCANELKKLNKKVLVIEKRNH   35 (298)
T ss_dssp             EEEEECC-SHHHHHHHHHHGGGTCCEEEECSSSS
T ss_pred             cEEEECC-cHHHHHHHHHHHhCCCcEEEEECCCC
Confidence            4677776 67899999999999999999987643

>d1dcfa_ c.23.1.2 (A:) Receiver domain of the ethylene receptor {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: Receiver domain of the ethylene receptor
domain: Receiver domain of the ethylene receptor
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=81.45  E-value=1.3  Score=30.38  Aligned_cols=38  Identities=24%  Similarity=0.217  Sum_probs=33.0

Q ss_pred             cCCCCCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeC
Q 024230           15 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSR   52 (270)
Q Consensus        15 ~~~l~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r   52 (270)
                      +.+++|++|||+--....-..+.+.|.+.|++|..+..
T Consensus         2 m~d~~g~rILvVDD~~~~~~~l~~~L~~~G~~v~~a~~   39 (134)
T d1dcfa_           2 MSNFTGLKVLVMDENGVSRMVTKGLLVHLGCEVTTVSS   39 (134)
T ss_dssp             CCCCTTCEEEEECSCHHHHHHHHHHHHHTTCEEEEESS
T ss_pred             CCCCCCCEEEEEeCCHHHHHHHHHHHHHCCCEEEEECC
Confidence            57899999999999988888888999999999886654

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=81.44  E-value=6.9  Score=29.40  Aligned_cols=77  Identities=16%  Similarity=0.130  Sum_probs=53.0

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC-eEEEeeCChhHHHHHHHHHHhcC--CeEEEEEccCCCHHHHHHHHHHHHHHc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGA-TVHTCSRTETELNECIHHLQMKG--LKVTGSVCDVSSRPQRQTLINTVSSLF   95 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~i~~~~   95 (270)
                      +|++||=.|.+.|   ..+..+++.|. +|+.++.+++.++.+.+.....+  .++.+...|.....-          ..
T Consensus        24 ~~~~VLDlGCG~G---~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~----------~~   90 (252)
T d1ri5a_          24 RGDSVLDLGCGKG---GDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHM----------DL   90 (252)
T ss_dssp             TTCEEEEETCTTT---TTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCC----------CC
T ss_pred             CcCEEEEecccCc---HHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhhcc----------cc
Confidence            6789999998876   23456677775 79999999998877766555443  468888999854210          01


Q ss_pred             CCcccEEEECCCC
Q 024230           96 NGKLNIFVNNVGT  108 (270)
Q Consensus        96 ~~~id~li~~ag~  108 (270)
                      .++.|+++.+-+.
T Consensus        91 ~~~fD~V~~~~~l  103 (252)
T d1ri5a_          91 GKEFDVISSQFSF  103 (252)
T ss_dssp             SSCEEEEEEESCG
T ss_pred             cccceEEEEccee
Confidence            1468888776554

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=81.43  E-value=0.59  Score=34.99  Aligned_cols=32  Identities=16%  Similarity=0.288  Sum_probs=27.2

Q ss_pred             EEEecCCCcHHHHHHHHHHHCCCeEEEeeCChh
Q 024230           23 ALVTGGTKGLGLAVVEELSMLGATVHTCSRTET   55 (270)
Q Consensus        23 vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~   55 (270)
                      |+|+|+ |.-|...|.++++.|.+|.++.+.++
T Consensus         8 viVIG~-GpAGl~aA~~aa~~G~kV~lie~~~~   39 (233)
T d1v59a1           8 VVIIGG-GPAGYVAAIKAAQLGFNTACVEKRGK   39 (233)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEecCC
Confidence            677887 55699999999999999999987654

>d2a9pa1 c.23.1.1 (A:2-118) DNA-binding response regulator MicA, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: DNA-binding response regulator MicA, N-terminal domain
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=81.41  E-value=5.4  Score=26.26  Aligned_cols=79  Identities=9%  Similarity=0.057  Sum_probs=50.2

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCccc
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLN  100 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id  100 (270)
                      |+|||+--...+-..+...|.+.|++|..+..-++.    .+.+++..-.+...-..+-+.+. -+++.++.+.  ..+-
T Consensus         1 KrILiVdDd~~~~~~l~~~L~~~g~~v~~a~~~~ea----l~~~~~~~~dlillD~~mp~~~G-~~~~~~i~~~--~~~p   73 (117)
T d2a9pa1           1 KKILIVDDEKPISDIIKFNMTKEGYEVVTAFNGREA----LEQFEAEQPDIIILDLMLPEIDG-LEVAKTIRKT--SSVP   73 (117)
T ss_dssp             CEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHH----HHHHHHHCCSEEEECSSCSSSCH-HHHHHHHHTT--CCCC
T ss_pred             CEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHH----HHHHHhcCCCEEEeccccCCCCc-cHHHHHHHhC--CCCC
Confidence            789999999999999999999999999866543333    33334444445444444445444 3566666554  2344


Q ss_pred             EEEECC
Q 024230          101 IFVNNV  106 (270)
Q Consensus       101 ~li~~a  106 (270)
                      +++..+
T Consensus        74 vI~lt~   79 (117)
T d2a9pa1          74 ILMLSA   79 (117)
T ss_dssp             EEEEES
T ss_pred             EEEEec
Confidence            444444

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=81.01  E-value=0.77  Score=36.77  Aligned_cols=34  Identities=18%  Similarity=0.165  Sum_probs=27.6

Q ss_pred             CEEEEecCCCcHHHHHHHHHHHCC--CeEEEeeCChh
Q 024230           21 MTALVTGGTKGLGLAVVEELSMLG--ATVHTCSRTET   55 (270)
Q Consensus        21 k~vlItG~s~giG~~la~~l~~~G--~~v~l~~r~~~   55 (270)
                      |+|+|+|| |--|..+|..|+++|  ++|+++.|+..
T Consensus         5 KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~~   40 (335)
T d2gv8a1           5 RKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRGS   40 (335)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred             CeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence            68888876 566778999999887  48999988754

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=80.91  E-value=0.36  Score=35.35  Aligned_cols=36  Identities=11%  Similarity=0.029  Sum_probs=29.9

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChh
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTET   55 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~   55 (270)
                      +++.|+|+||+ -.|.+.|..+++.|.+|+++.+...
T Consensus         4 k~~dVvIIGGG-paGl~AA~~~ar~g~~v~iie~~~~   39 (190)
T d1trba1           4 KHSKLLILGSG-PAGYTAAVYAARANLQPVLITGMEK   39 (190)
T ss_dssp             EEEEEEEECCS-HHHHHHHHHHHTTTCCCEEECCSST
T ss_pred             CCCcEEEECCC-HHHHHHHHHHHHcCCceEEEEeecc
Confidence            35678899885 5899999999999999999987544

>d1p5ja_ c.79.1.1 (A:) L-serine dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: L-serine dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.63  E-value=2.7  Score=33.19  Aligned_cols=54  Identities=19%  Similarity=0.199  Sum_probs=35.6

Q ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEE
Q 024230           20 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGS   74 (270)
Q Consensus        20 gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~   74 (270)
                      |+.-+|+..+|-.|.++|..-+..|.+++++-...... ...+.++..+.++..+
T Consensus        53 g~~~vv~aSsGN~g~a~A~~a~~~G~~~~i~~p~~~~~-~k~~~~~~~Ga~v~~~  106 (319)
T d1p5ja_          53 GCAHFVCSSAGNAGMAAAYAARQLGVPATIVVPGTTPA-LTIERLKNEGATCKVV  106 (319)
T ss_dssp             TCCEEEECCSSHHHHHHHHHHHHHTCCEEEEECTTCCH-HHHHHHHHTTCEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHhhhccccceecccccccc-ccccccccceeccccc
Confidence            45667888899999999998888898866654332221 2234455556665544

>d1vb3a1 c.79.1.1 (A:1-428) Threonine synthase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine synthase
species: Escherichia coli [TaxId: 562]

Probab=80.44  E-value=1.6  Score=36.51  Aligned_cols=72  Identities=17%  Similarity=0.117  Sum_probs=50.3

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCC-CeEEEeeCChh--HHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLG-ATVHTCSRTET--ELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSS   93 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G-~~v~l~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   93 (270)
                      .++..+++..||..|.+.+..++..+ .+++++.....  ..++  +++...+.+++.+.+| .+-++++.+++++..
T Consensus       124 ~~~~~Il~ATSGDTG~Aa~~a~~~~~~i~~~vl~P~g~vS~~Q~--~Qmtt~g~nv~vi~V~-G~fDDcq~lvk~~f~  198 (428)
T d1vb3a1         124 DKPVTILTATSGDTGAAVAHAFYGLPNVKVVILYPRGKISPLQE--KLFCTLGGNIETVAID-GDFDACQALVKQAFD  198 (428)
T ss_dssp             TCCEEEEEECSSSHHHHHHHHTTTCTTEEEEEEEETTCSCHHHH--HHHHSCCTTEEEEEEE-SCHHHHHHHHHHGGG
T ss_pred             cccceeeecCCCCcchhHHHHHhCccccceEEEecCCCCcHHHH--HHHhhccCCceEEecC-CChhHHHHHHHHHhh
Confidence            34566788888999999999999886 46666533222  2222  3444567788888877 668888888888753

>d1gpea1 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penicillium amagasakiense [TaxId: 63559]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glucose oxidase
species: Penicillium amagasakiense [TaxId: 63559]

Probab=80.35  E-value=1.3  Score=36.49  Aligned_cols=41  Identities=22%  Similarity=0.265  Sum_probs=31.7

Q ss_pred             ccccCCCCCCE--EEEecCCCcHHHHHHHHHHHCC-CeEEEeeCC
Q 024230           12 RQNRWSLQGMT--ALVTGGTKGLGLAVVEELSMLG-ATVHTCSRT   53 (270)
Q Consensus        12 ~~~~~~l~gk~--vlItG~s~giG~~la~~l~~~G-~~v~l~~r~   53 (270)
                      +.....+.||+  ++|+|++ .-|..+|.+|++.| .+|.++-+-
T Consensus        14 ~~~p~~~~~~tyD~IIVGsG-~aG~vlA~rLae~~~~~VLlLEaG   57 (391)
T d1gpea1          14 LSDPSKVAGKTYDYIIAGGG-LTGLTVAAKLTENPKIKVLVIEKG   57 (391)
T ss_dssp             BCCGGGTTTCEEEEEEECCS-HHHHHHHHHHHTSTTCCEEEEESS
T ss_pred             cCCcccccCCeeeEEEECcC-HHHHHHHHHHHHCCCCeEEEEcCC
Confidence            34556788886  6788874 56889999999998 689998653

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=80.34  E-value=3.3  Score=31.21  Aligned_cols=80  Identities=14%  Similarity=0.222  Sum_probs=56.1

Q ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCeEEEeeCChhHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCc
Q 024230           19 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGK   98 (270)
Q Consensus        19 ~gk~vlItG~s~giG~~la~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   98 (270)
                      .|.+||=.|+++|.=..........+.+|+.++.+++.++++.+.++.. ..+..+..|..+.+......        ..
T Consensus        73 pG~~VLDlGaGsG~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~-~~~~~i~~d~~~~~~~~~~~--------~~  143 (227)
T d1g8aa_          73 PGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER-RNIVPILGDATKPEEYRALV--------PK  143 (227)
T ss_dssp             TTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC-TTEEEEECCTTCGGGGTTTC--------CC
T ss_pred             CCCEEEEeccCCCHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhc-CCceEEEEECCCcccccccc--------cc
Confidence            5789999998877655433334444569999999999988877765443 45777888888776543222        57


Q ss_pred             ccEEEECCC
Q 024230           99 LNIFVNNVG  107 (270)
Q Consensus        99 id~li~~ag  107 (270)
                      +|++++...
T Consensus       144 vD~i~~d~~  152 (227)
T d1g8aa_         144 VDVIFEDVA  152 (227)
T ss_dssp             EEEEEECCC
T ss_pred             eEEEEEEcc
Confidence            888877543

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=80.21  E-value=0.57  Score=33.78  Aligned_cols=80  Identities=10%  Similarity=0.186  Sum_probs=52.0

Q ss_pred             EEEEecCCCcHHHHHHHHHHHC-CCeE-EEeeCChhHH--HHHH----------------HHHHhcCCeEEEEEccCCCH
Q 024230           22 TALVTGGTKGLGLAVVEELSML-GATV-HTCSRTETEL--NECI----------------HHLQMKGLKVTGSVCDVSSR   81 (270)
Q Consensus        22 ~vlItG~s~giG~~la~~l~~~-G~~v-~l~~r~~~~~--~~~~----------------~~~~~~~~~~~~~~~D~~~~   81 (270)
                      +|+|.|++|..|+++++...+. +.++ ..++|.....  ++..                +++.. ...   +..|++.+
T Consensus         6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~-~~D---ViIDFs~p   81 (162)
T d1diha1           6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKD-DFD---VFIDFTRP   81 (162)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTT-SCS---EEEECSCH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhc-ccc---eEEEeccH
Confidence            6999999999999999999887 4554 3344432210  0000                00000 112   45799999


Q ss_pred             HHHHHHHHHHHHHcCCcccEEEECCCC
Q 024230           82 PQRQTLINTVSSLFNGKLNIFVNNVGT  108 (270)
Q Consensus        82 ~~~~~~~~~i~~~~~~~id~li~~ag~  108 (270)
                      +...+.++.+.+   .++.+++-..|.
T Consensus        82 ~~~~~~~~~a~~---~~~~~ViGTTG~  105 (162)
T d1diha1          82 EGTLNHLAFCRQ---HGKGMVIGTTGF  105 (162)
T ss_dssp             HHHHHHHHHHHH---TTCEEEECCCCC
T ss_pred             HHHHHHHHHHHh---ccceeEEecCCC
Confidence            999888887665   367788877775

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.19  E-value=0.83  Score=36.06  Aligned_cols=31  Identities=26%  Similarity=0.300  Sum_probs=25.6

Q ss_pred             EEEecCCCcHHHHHHHHHHHCCCeEEEeeCCh
Q 024230           23 ALVTGGTKGLGLAVVEELSMLGATVHTCSRTE   54 (270)
Q Consensus        23 vlItG~s~giG~~la~~l~~~G~~v~l~~r~~   54 (270)
                      |+|+|| |--|.+.|.+|+++|++|.++.++.
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            567766 5669999999999999999997643

>d1im5a_ c.33.1.3 (A:) Pyrazinamidase/nicotinamidase {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Isochorismatase-like hydrolases
superfamily: Isochorismatase-like hydrolases
family: Isochorismatase-like hydrolases
domain: Pyrazinamidase/nicotinamidase
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=80.10  E-value=3.2  Score=29.61  Aligned_cols=49  Identities=10%  Similarity=0.140  Sum_probs=27.0

Q ss_pred             CEEEEecCCCcHHH-HHHHHHHHCCCeEEEe-----eCChhHHHHHHHHHHhcCC
Q 024230           21 MTALVTGGTKGLGL-AVVEELSMLGATVHTC-----SRTETELNECIHHLQMKGL   69 (270)
Q Consensus        21 k~vlItG~s~giG~-~la~~l~~~G~~v~l~-----~r~~~~~~~~~~~~~~~~~   69 (270)
                      ++++|+|...-+.- +.++....+|++|+++     +++++.-+...+.++..|.
T Consensus       120 ~~liv~G~~t~~CV~~T~~~a~~~g~~V~vv~Da~~s~~~~~h~~al~~l~~~g~  174 (179)
T d1im5a_         120 KRVYICGVATEYCVRATALDALKHGFEVYLLRDAVKGIKPEDEERALEEMKSRGI  174 (179)
T ss_dssp             CEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEECSCHHHHHHHHHHHHHTTC
T ss_pred             CEEEEEEeccchhHHHHHHHHHHcCCEEEEeccccCCCCHHHHHHHHHHHHHCCC
Confidence            46666666666654 4666666666666554     3444433444444444443