BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024232
(270 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449432181|ref|XP_004133878.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
sativus]
gi|449480146|ref|XP_004155812.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
sativus]
Length = 385
Score = 327 bits (839), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 158/264 (59%), Positives = 202/264 (76%), Gaps = 11/264 (4%)
Query: 6 PADAAETSPLLAHSLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRE 65
P A + SPLL HS+ + L RSR +RR P PLRGA RLLRRASGR++MLREPSVRVRE
Sbjct: 11 PFRAVDNSPLLGHSVTNGLFRSRGFIRRSPQPLRGAV-RLLRRASGRQMMLREPSVRVRE 69
Query: 66 TAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQ 125
TAAEQLEERQS WAYS+PII+LD+LWNL FVI++F VLG+S +EKP VPLR I+GYALQ
Sbjct: 70 TAAEQLEERQSDWAYSKPIILLDLLWNLAFVIISFTVLGLSTSEKPSVPLRFWIIGYALQ 129
Query: 126 CLFHVFCVSLEFKRRRRGEGVV----FGDSVSGSSSTTVTGDE------EERFHGENDSS 175
C+ H+ CV++E+KRRR D SG S +V+G + E+ + + S+
Sbjct: 130 CIIHMSCVAVEYKRRRSTREPTGLDRNSDWTSGEDSNSVSGSDGDDYATEQTVNEDESSN 189
Query: 176 VAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVA 235
+ K++ESANT SF+WW++GFYW+TA G+ LI SPQLYWL +TFLAFDVVFV+ICV +A
Sbjct: 190 LVKHIESANTMFSFIWWLLGFYWVTAGGQELIEGSPQLYWLSITFLAFDVVFVLICVAIA 249
Query: 236 CLIGIAVCCCLPCILGILYALTER 259
CL+G+A+CCCLPCI+ ILYA+T++
Sbjct: 250 CLVGVAICCCLPCIIAILYAVTDQ 273
>gi|255541482|ref|XP_002511805.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
gi|223548985|gb|EEF50474.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
Length = 375
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 166/260 (63%), Positives = 204/260 (78%), Gaps = 4/260 (1%)
Query: 4 NPPADAAETSPLLAHSLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRV 63
+P +D+ + SPLL HS+ DHL+RSRR+LRR PPP RGAAARLLRRAS RR+MLREPSVRV
Sbjct: 3 SPQSDSVDMSPLLTHSIADHLLRSRRILRRQPPPFRGAAARLLRRASSRRMMLREPSVRV 62
Query: 64 RETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYA 123
RE AAEQLEERQ+ WAYS+PII LDVLWNL FV + VLG+S+ E+P++PLR+ I+GY+
Sbjct: 63 RENAAEQLEERQTDWAYSKPIIFLDVLWNLAFVGIGVVVLGLSVKEEPQLPLRVWIIGYS 122
Query: 124 LQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVTGDE----EERFHGENDSSVAKN 179
LQCLFH+ CV E+KRR G S S S S + GD E+ + D+ V K
Sbjct: 123 LQCLFHIGCVIFEYKRRLFGTSARLEASDSTSVSESDGGDSVDDGVEQRGNDGDTCVVKQ 182
Query: 180 LESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIG 239
LESANT SF+WWIVGFYW+TA G+ L + SPQLYWLC+TFLAFDV+FV+IC+ VACLIG
Sbjct: 183 LESANTMFSFIWWIVGFYWVTAGGQNLTNDSPQLYWLCITFLAFDVIFVIICIAVACLIG 242
Query: 240 IAVCCCLPCILGILYALTER 259
+A+CCCLPCI+GILYA+T+R
Sbjct: 243 LAICCCLPCIIGILYAMTDR 262
>gi|297817430|ref|XP_002876598.1| hypothetical protein ARALYDRAFT_486593 [Arabidopsis lyrata subsp.
lyrata]
gi|297322436|gb|EFH52857.1| hypothetical protein ARALYDRAFT_486593 [Arabidopsis lyrata subsp.
lyrata]
Length = 377
Score = 304 bits (778), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 153/261 (58%), Positives = 184/261 (70%), Gaps = 13/261 (4%)
Query: 4 NPPADAAETSPLLAHSLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRV 63
+P D + SPLL + + S+ PLRGAA+RLLRRAS RR+MLREPSVRV
Sbjct: 12 SPATDTMDVSPLLGRNRRNRPRSSQ--------PLRGAASRLLRRASNRRMMLREPSVRV 63
Query: 64 RETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYA 123
RE AAEQLEERQS WAYS+PIIVLD+LWN VFVIV+ A+LG S E P+VPLRL I+GY
Sbjct: 64 REVAAEQLEERQSQWAYSKPIIVLDILWNFVFVIVSIAILGFSSEEDPDVPLRLWIIGYN 123
Query: 124 LQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVTGDEEERF-----HGENDSSVAK 178
QCL HV CV E+KRRR G+ S S + + DE + + ++ +S K
Sbjct: 124 FQCLLHVGCVIAEYKRRREANSPPSGEDSSNHESLSGSDDESDGYSINDTDDDHGTSFTK 183
Query: 179 NLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLI 238
+LESANT SF+WWI+GFYW+TA E L SPQLYWLCV FLAFDV+FV+ICV VA LI
Sbjct: 184 HLESANTMFSFVWWIIGFYWVTADTEALAQSSPQLYWLCVAFLAFDVMFVVICVAVASLI 243
Query: 239 GIAVCCCLPCILGILYALTER 259
GIAVCCCLPCI+ ILYAL ++
Sbjct: 244 GIAVCCCLPCIIAILYALADQ 264
>gi|18411876|ref|NP_567110.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|16648921|gb|AAL24312.1| putative protein [Arabidopsis thaliana]
gi|17978715|gb|AAL47351.1| putative protein [Arabidopsis thaliana]
gi|332646647|gb|AEE80168.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 379
Score = 301 bits (771), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 153/263 (58%), Positives = 186/263 (70%), Gaps = 15/263 (5%)
Query: 4 NPPADAAETSPLLAHSLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRV 63
+P D + SPLL + + S+ P+RGAA+RLLRRAS RR+MLREPSVRV
Sbjct: 12 SPTTDTMDASPLLGRNRRNRPRSSQ--------PIRGAASRLLRRASNRRMMLREPSVRV 63
Query: 64 RETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYA 123
RE AAEQLEERQS WAYS+PIIVLD+LWN +FVIV+ A+LG S +E P+VPLRL I+GY
Sbjct: 64 REVAAEQLEERQSQWAYSKPIIVLDILWNFLFVIVSIAILGFSSDEDPDVPLRLWIIGYN 123
Query: 124 LQCLFHVFCVSLEFKRRR-------RGEGVVFGDSVSGSSSTTVTGDEEERFHGENDSSV 176
+QCLFHV CV E+KRRR GE +S+SGS + ++ +S
Sbjct: 124 VQCLFHVGCVIAEYKRRRVANSPPPSGEDSSNHESLSGSEDESDGYSINNTDDDDHGTSF 183
Query: 177 AKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC 236
K+LESANT SF+WWI+GFYW+TA E L SPQLYWLCV FLAFDV+FV+ICV VA
Sbjct: 184 TKHLESANTMFSFVWWIIGFYWVTADTEALAQSSPQLYWLCVAFLAFDVMFVVICVAVAS 243
Query: 237 LIGIAVCCCLPCILGILYALTER 259
LIGIAVCCCLPCI+ ILYAL ++
Sbjct: 244 LIGIAVCCCLPCIIAILYALADQ 266
>gi|6850885|emb|CAB71048.1| putative protein [Arabidopsis thaliana]
Length = 362
Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 146/230 (63%), Positives = 174/230 (75%), Gaps = 7/230 (3%)
Query: 37 PLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFV 96
P+RGAA+RLLRRAS RR+MLREPSVRVRE AAEQLEERQS WAYS+PIIVLD+LWN +FV
Sbjct: 20 PIRGAASRLLRRASNRRMMLREPSVRVREVAAEQLEERQSQWAYSKPIIVLDILWNFLFV 79
Query: 97 IVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRR-------RGEGVVFG 149
IV+ A+LG S +E P+VPLRL I+GY +QCLFHV CV E+KRRR GE
Sbjct: 80 IVSIAILGFSSDEDPDVPLRLWIIGYNVQCLFHVGCVIAEYKRRRVANSPPPSGEDSSNH 139
Query: 150 DSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISC 209
+S+SGS + ++ +S K+LESANT SF+WWI+GFYW+TA E L
Sbjct: 140 ESLSGSEDESDGYSINNTDDDDHGTSFTKHLESANTMFSFVWWIIGFYWVTADTEALAQS 199
Query: 210 SPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTER 259
SPQLYWLCV FLAFDV+FV+ICV VA LIGIAVCCCLPCI+ ILYAL ++
Sbjct: 200 SPQLYWLCVAFLAFDVMFVVICVAVASLIGIAVCCCLPCIIAILYALADQ 249
>gi|301133592|gb|ADK63418.1| C3HC4 type zinc finger protein [Brassica rapa]
Length = 363
Score = 283 bits (724), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 149/255 (58%), Positives = 174/255 (68%), Gaps = 20/255 (7%)
Query: 6 PADAAETSPLLAHSLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRE 65
PA +SPLL + RRP PLRGAA+RLLRRAS R +MLRE SVRVRE
Sbjct: 15 PATDDASSPLLNRN------------RRPSQPLRGAASRLLRRASSRGMMLRESSVRVRE 62
Query: 66 TAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQ 125
TAAEQ+EERQS WAYS+P+IVLDVLWNL FV V V S E P PLR IVGY LQ
Sbjct: 63 TAAEQIEERQSEWAYSKPVIVLDVLWNLAFVFVTVGVSWFSSEEDPRAPLRFWIVGYNLQ 122
Query: 126 CLFHVFCVSLEFKRRRRGEGVVFG-DSVSGSSSTTVTGDEEERFHGENDSSVAKNLESAN 184
CL H+ CV E++RR + G SV GSS G E E+ +SVAK++ES N
Sbjct: 123 CLIHIACVIAEYRRRESNRDLDSGLSSVQGSSDG--YGAE-----IESGNSVAKHIESTN 175
Query: 185 TFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCC 244
SF+WW++GFYW+TA E L SPQLYWLCV FLAFDV+FV++CV VACLIGIAVCC
Sbjct: 176 AIFSFVWWVIGFYWVTADAEELAQSSPQLYWLCVAFLAFDVIFVVLCVAVACLIGIAVCC 235
Query: 245 CLPCILGILYALTER 259
CLPCI+ +LYAL +R
Sbjct: 236 CLPCIIAVLYALADR 250
>gi|224063987|ref|XP_002301335.1| predicted protein [Populus trichocarpa]
gi|222843061|gb|EEE80608.1| predicted protein [Populus trichocarpa]
Length = 378
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 156/261 (59%), Positives = 196/261 (75%), Gaps = 11/261 (4%)
Query: 4 NPPADAAETSPLLAHSLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRV 63
+P +DA ++SPLLAHS+ +HL+RSRRLLRRPP LRGAAAR+LRRAS RR+MLREPSVRV
Sbjct: 11 SPQSDAIDSSPLLAHSIANHLLRSRRLLRRPPQ-LRGAAARILRRASSRRMMLREPSVRV 69
Query: 64 RETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYA 123
RE AAEQLEERQS W YS+P++V+DVLW+L VI+A VLG+S+ EKP VP R IV Y
Sbjct: 70 RENAAEQLEERQSDWGYSKPVVVIDVLWSLAIVIIAVGVLGLSLEEKPRVPFRAWIVAYI 129
Query: 124 LQCLFHVFCVSLEFKRRR----RGEGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKN 179
L C HV CV +E+++RR R G++ D SG S T E G+N +SVAK
Sbjct: 130 LLCSCHVVCVVVEYRKRRNLGLRESGILSSD--SGDSLDFSTQQSEN--DGQN-TSVAKR 184
Query: 180 LESANTFLSFLWWIVGFYWITASG-ETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLI 238
+ESA T S +WWI+GFYW+T +G + + SPQLYWLC+ FLA D +FV+IC+ VACLI
Sbjct: 185 VESAMTTFSIIWWIIGFYWVTTAGRQNVAKDSPQLYWLCIAFLAADTLFVIICIAVACLI 244
Query: 239 GIAVCCCLPCILGILYALTER 259
GIAVCC LPCI+GILYA+ ++
Sbjct: 245 GIAVCCFLPCIIGILYAMADQ 265
>gi|356530111|ref|XP_003533627.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 369
Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 142/243 (58%), Positives = 171/243 (70%), Gaps = 13/243 (5%)
Query: 24 LIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRP 83
L RSRR R PP LR AA RRASGRR+MLREPSVRVRE AA ++E RQS WAYSRP
Sbjct: 23 LPRSRR---RAPPSLR-TAATFFRRASGRRMMLREPSVRVREAAAAEVEGRQSEWAYSRP 78
Query: 84 IIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRG 143
++ LDV WN F+ + +VL +S +E P VPLR IVGY LQ H CV EF RRRR
Sbjct: 79 VVALDVAWNAAFLAIGASVLALSADEDPCVPLRAWIVGYLLQGALHSLCVVAEFTRRRRT 138
Query: 144 ---EGVVFGDSVSGSSSTTVTGDEE----ERFHGENDSSVAKNLESANTFLSFLWWIVGF 196
G G +V S S+ DEE E+F + +S+ K++ESANT LSF+WWIVGF
Sbjct: 139 ATISGTHSGSNVEWSFSSE--SDEEFYPSEQFLEGDGNSITKHIESANTMLSFIWWIVGF 196
Query: 197 YWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYAL 256
YW+TA G++L SPQLYWLC+TFL+FDV+ V+ICV VACLIGIAVCCCLPCIL ILY +
Sbjct: 197 YWVTAGGQSLTRDSPQLYWLCITFLSFDVMIVLICVAVACLIGIAVCCCLPCILAILYVV 256
Query: 257 TER 259
++
Sbjct: 257 ADQ 259
>gi|297824629|ref|XP_002880197.1| hypothetical protein ARALYDRAFT_322232 [Arabidopsis lyrata subsp.
lyrata]
gi|297326036|gb|EFH56456.1| hypothetical protein ARALYDRAFT_322232 [Arabidopsis lyrata subsp.
lyrata]
Length = 381
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 148/249 (59%), Positives = 175/249 (70%), Gaps = 17/249 (6%)
Query: 24 LIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRP 83
L R+RR L R PLRGAA+RLLRRAS RR+MLRE SVRVRE AAEQ+EERQS WAYS+P
Sbjct: 24 LNRNRRALSRSSQPLRGAASRLLRRASSRRMMLRESSVRVRENAAEQIEERQSEWAYSKP 83
Query: 84 IIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRG 143
+IVLDVLWNL FV V A+LG S +E P VPLR I+GY LQCLFHV CV E++RR R
Sbjct: 84 VIVLDVLWNLAFVFVTIAILGFSSDENPHVPLRFWIIGYNLQCLFHVGCVIAEYRRRHRR 143
Query: 144 EGVVFGDS-------------VSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFL 190
+ F + S + D + E +S+AK+LESAN SF+
Sbjct: 144 QSDDFPNEDSVLGSSSSHGSSEDESDDYAIVDDSQ----IEPGTSLAKHLESANAIFSFV 199
Query: 191 WWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCIL 250
WWI+GFYW+TA E L SPQLYWLCV FLAFDV+FV++CV VACLIGIAVCCCLPCI+
Sbjct: 200 WWIIGFYWVTADSEELSQSSPQLYWLCVAFLAFDVIFVVLCVAVACLIGIAVCCCLPCII 259
Query: 251 GILYALTER 259
+LYAL +R
Sbjct: 260 AVLYALADR 268
>gi|356568312|ref|XP_003552356.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 375
Score = 267 bits (683), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 141/241 (58%), Positives = 171/241 (70%), Gaps = 9/241 (3%)
Query: 26 RSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPII 85
RSR LLRR PPPL AA RRASGRR+MLREPSVR+RE AA ++E RQS WAYSRP++
Sbjct: 25 RSRHLLRRAPPPLH-TAATFFRRASGRRMMLREPSVRMREAAAAEVEGRQSEWAYSRPVV 83
Query: 86 VLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRG-- 143
LDV WN VF+ + +VL +S +E P VPLR IVGY LQ H CV EF RRRR
Sbjct: 84 ALDVAWNAVFLAIGASVLALSTDEDPCVPLRAWIVGYLLQGALHSLCVVAEFTRRRRRRV 143
Query: 144 EGVVFGDSVSGSSSTTVTGDEEERFHG-----END-SSVAKNLESANTFLSFLWWIVGFY 197
G G +V G + + + +E F+ E D +S+ K++E+ NT LSF+WWIVGFY
Sbjct: 144 SGTHPGSNVVGHVQWSFSSESDEEFYPPEQFLEGDGNSITKHIETVNTMLSFIWWIVGFY 203
Query: 198 WITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALT 257
W+TA G++L SPQLYWLC+TFLAFDVV V+ICV VACLIGIAVCCCLPCIL ILY +
Sbjct: 204 WVTAGGQSLTRDSPQLYWLCITFLAFDVVIVLICVSVACLIGIAVCCCLPCILAILYVVA 263
Query: 258 E 258
+
Sbjct: 264 D 264
>gi|356565289|ref|XP_003550874.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 379
Score = 260 bits (665), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 127/223 (56%), Positives = 160/223 (71%), Gaps = 6/223 (2%)
Query: 42 AARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFA 101
AAR LR+ASGRRLM REPS+ VRE AAEQLEERQS WAYS+P++VLD+LWN FV A
Sbjct: 46 AARFLRQASGRRLM-REPSMVVREAAAEQLEERQSDWAYSKPVVVLDILWNCAFVAAAAT 104
Query: 102 VLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRR-----GEGVVFGDSVSGSS 156
VL +S NE P +PLRL IVGYALQ + HV CV +E++RR R V GD S
Sbjct: 105 VLVLSRNENPNMPLRLWIVGYALQSVLHVACVCVEYRRRLRHREHSNAAAVSGDGSGDLS 164
Query: 157 STTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWL 216
S ++ G ++ S+AK+LESANT SF+WW+VGFYW++A E L+ SP LYWL
Sbjct: 165 SPSMDGSGHYVSFDDDGISMAKHLESANTMFSFIWWVVGFYWVSADSEALVQDSPLLYWL 224
Query: 217 CVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTER 259
C+ FL FDV FV+ C+ +AC+IGIAVCCCLPCI+ +LYA+ ++
Sbjct: 225 CIAFLGFDVFFVVFCIALACIIGIAVCCCLPCIIALLYAVADQ 267
>gi|225453718|ref|XP_002271651.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
[Vitis vinifera]
Length = 382
Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 159/265 (60%), Positives = 198/265 (74%), Gaps = 15/265 (5%)
Query: 7 ADAAETSPLLAHSLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRET 66
ADA +T+PLL S+ D ++RSRRL+RRPP LRGAA R LRRAS RR+M REPS+RVRET
Sbjct: 8 ADATDTTPLLHASVSDQILRSRRLIRRPPS-LRGAA-RFLRRASSRRIM-REPSMRVRET 64
Query: 67 AAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQC 126
AAEQLEERQS WAYS+PI++LD++WNL FV+VA VL +S +E P PLRL I+GY LQC
Sbjct: 65 AAEQLEERQSDWAYSKPIVILDIVWNLAFVVVAMTVLVMSRDETPSTPLRLWIIGYGLQC 124
Query: 127 LFHVFCVSLEFKRRRR----GEGVVFGDSVSGSSSTTVTGDE--------EERFHGENDS 174
+ H+ CV +E+KRRRR G G SG S++ DE E R E+++
Sbjct: 125 VLHMVCVCVEYKRRRRLVSSGALERSGGWGSGHLSSSSGSDEGDPIDYRVEVRNRDEDET 184
Query: 175 SVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGV 234
SVAK+LESANT SF+WWI+GFYW++A G+ L SPQLYWLC+ FLAFDV FV+ICV V
Sbjct: 185 SVAKHLESANTMFSFIWWIIGFYWVSAGGQDLTRDSPQLYWLCIVFLAFDVFFVVICVAV 244
Query: 235 ACLIGIAVCCCLPCILGILYALTER 259
AC+IGIAVCCCLPCI+ ILY + ++
Sbjct: 245 ACVIGIAVCCCLPCIIAILYTVADQ 269
>gi|449460475|ref|XP_004147971.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Cucumis
sativus]
Length = 383
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 139/263 (52%), Positives = 183/263 (69%), Gaps = 15/263 (5%)
Query: 8 DAAETSPLLA--HSLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRE 65
D +TSPL+ + D RR ++R LR AAR LR+AS RR M REPS+ VRE
Sbjct: 13 DILDTSPLMGTPNRSLDDTHSGRRFVQRQS--LR-QAARFLRQASNRRTM-REPSMLVRE 68
Query: 66 TAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQ 125
TAAEQLEERQS WAYS+P+++LD++WN FV+VA +L +S NE P +PLRL IVGYA Q
Sbjct: 69 TAAEQLEERQSDWAYSKPVVILDIVWNFAFVVVAATILVLSRNESPSMPLRLWIVGYAFQ 128
Query: 126 CLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVTG--DEEERFH-------GENDSSV 176
C+ H+ CV +E++RRR+ F G+S+ +++G H ENDSSV
Sbjct: 129 CILHMVCVCVEYRRRRQLRYSAFSSMEEGNSARSISGLGSRANSSHYVSLAQLDENDSSV 188
Query: 177 AKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC 236
AK+LESANT SF+WWI+GFYW++A G++L SP LYWLC+ FL FDV FV+ CV +AC
Sbjct: 189 AKHLESANTMFSFIWWIIGFYWVSAGGQSLAQASPLLYWLCIIFLGFDVFFVVFCVALAC 248
Query: 237 LIGIAVCCCLPCILGILYALTER 259
+IGIAVCCCLPCI+ +LYA+ ++
Sbjct: 249 IIGIAVCCCLPCIIALLYAVADQ 271
>gi|225453720|ref|XP_002271690.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
[Vitis vinifera]
Length = 365
Score = 249 bits (637), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 152/253 (60%), Positives = 187/253 (73%), Gaps = 8/253 (3%)
Query: 7 ADAAETSPLLAHSLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRET 66
ADA +T+PLL S+ D ++RSRRL+RRPP LRGAA R LRRAS RR+M REPS+RVRET
Sbjct: 8 ADATDTTPLLHASVSDQILRSRRLIRRPPS-LRGAA-RFLRRASSRRIM-REPSMRVRET 64
Query: 67 AAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQC 126
AAEQLEERQS WAYS+PI++LD++WNL FV+VA VL +S +E P PLRL I+GY LQC
Sbjct: 65 AAEQLEERQSDWAYSKPIVILDIVWNLAFVVVAMTVLVMSRDETPSTPLRLWIIGYGLQC 124
Query: 127 LFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTF 186
+ H+ CV +E+KRRRR S + S G SVAK+LESANT
Sbjct: 125 VLHMVCVCVEYKRRRR-----LVSSGALERSGGWGSGHLSSSSGNFSCSVAKHLESANTM 179
Query: 187 LSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCL 246
SF+WWI+GFYW++A G+ L SPQLYWLC+ FLAFDV FV+ICV VAC+IGIAVCCCL
Sbjct: 180 FSFIWWIIGFYWVSAGGQDLTRDSPQLYWLCIVFLAFDVFFVVICVAVACVIGIAVCCCL 239
Query: 247 PCILGILYALTER 259
PCI+ ILY + ++
Sbjct: 240 PCIIAILYTVADQ 252
>gi|301133542|gb|ADK63393.1| C3HC4 type zinc finger protein [Brassica rapa]
Length = 313
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 126/207 (60%), Positives = 147/207 (71%), Gaps = 8/207 (3%)
Query: 54 LMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEV 113
+MLRE SVRVRETAAEQ+EERQS WAYS+P+IVLDVLWNL FV V V S E P
Sbjct: 1 MMLRESSVRVRETAAEQIEERQSEWAYSKPVIVLDVLWNLAFVFVTVGVSWFSSEEDPRA 60
Query: 114 PLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFG-DSVSGSSSTTVTGDEEERFHGEN 172
PLR IVGY LQCL H+ CV E++RR + G SV GSS G E E+
Sbjct: 61 PLRFWIVGYNLQCLIHIACVIAEYRRRESNRDLDSGLSSVQGSSDGY--GAE-----IES 113
Query: 173 DSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICV 232
+SVAK +ES N SF+WW++GFYW+TA E L SPQLYWLCV FLAFDV+FV++CV
Sbjct: 114 GNSVAKPIESTNAIFSFVWWVIGFYWVTADAEELAQSSPQLYWLCVAFLAFDVIFVVLCV 173
Query: 233 GVACLIGIAVCCCLPCILGILYALTER 259
VACLIGIAVCCCLPCI+ +LYAL +R
Sbjct: 174 AVACLIGIAVCCCLPCIIAVLYALADR 200
>gi|356514046|ref|XP_003525718.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 380
Score = 239 bits (611), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 134/260 (51%), Positives = 173/260 (66%), Gaps = 13/260 (5%)
Query: 8 DAAETSPLLAHSLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRETA 67
DAA+ +P L S + S R P AAR LR+ASGRRLM REPS+ VRE A
Sbjct: 14 DAADPTPFLGTSSDE----STSGRRLLRRPSLREAARFLRQASGRRLM-REPSMVVREAA 68
Query: 68 AEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCL 127
AEQLEERQS WAYS+P++VLD+LWN FV A V +S NE P +PLRL IVGYALQC+
Sbjct: 69 AEQLEERQSDWAYSKPVVVLDILWNFAFVAAAATVFILSRNENPNMPLRLWIVGYALQCV 128
Query: 128 FHVFCVSLEFKRR--RRGEGVVFGDSVS-----GSSSTTVTGDEEERFHGENDS-SVAKN 179
HV CV +E++RR RR + + G S +G ++D S+AK+
Sbjct: 129 LHVACVCVEYQRRLRRREQSNAAAIAGGGSGDLGPPSMDGSGHYVSLAQFDDDGISMAKH 188
Query: 180 LESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIG 239
LESANT SF+WW+VGFYW++A E+L+ SP LYWLC+ FL FDV FV+ C+ +AC++G
Sbjct: 189 LESANTMFSFIWWVVGFYWVSADSESLVRDSPLLYWLCIAFLGFDVFFVVFCMALACIVG 248
Query: 240 IAVCCCLPCILGILYALTER 259
IAVCCCLPCI+ +LYA+ ++
Sbjct: 249 IAVCCCLPCIIALLYAVADQ 268
>gi|224130104|ref|XP_002320753.1| predicted protein [Populus trichocarpa]
gi|222861526|gb|EEE99068.1| predicted protein [Populus trichocarpa]
Length = 320
Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 126/205 (61%), Positives = 155/205 (75%), Gaps = 1/205 (0%)
Query: 55 MLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVP 114
MLREPSVRVRE AAEQLEERQS W YS+PI+++DVL NL FVI+A VLG+S+ EKP+VP
Sbjct: 1 MLREPSVRVRENAAEQLEERQSGWGYSKPIVLIDVLRNLAFVIIAVGVLGLSLEEKPKVP 60
Query: 115 LRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVTGDEEERFHGENDS 174
LR+ IVGY LQCL HV CV +E+++RR G SGS + G GE+ S
Sbjct: 61 LRVWIVGYGLQCLCHVVCVVVEYRKRRNLGFEESGILSSGSGDSLGFGTHRSGNDGEDTS 120
Query: 175 SVAKNLESANTFLSFLWWIVGFYWITASG-ETLISCSPQLYWLCVTFLAFDVVFVMICVG 233
V K +ESA+T +S +WW++GFYW+TA+G + L SPQLYWLCVTFLAFD +FV+IC
Sbjct: 121 RVPKRVESASTMVSVIWWVIGFYWVTAAGRQDLEENSPQLYWLCVTFLAFDALFVIICAA 180
Query: 234 VACLIGIAVCCCLPCILGILYALTE 258
ACLIGIAVCCCLPCI+GILYA+T+
Sbjct: 181 AACLIGIAVCCCLPCIIGILYAMTD 205
>gi|357136998|ref|XP_003570089.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
[Brachypodium distachyon]
Length = 374
Score = 237 bits (604), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 137/256 (53%), Positives = 181/256 (70%), Gaps = 17/256 (6%)
Query: 11 ETSPLLAHSLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQ 70
+++PLL R R +LRRP LRG A RLLR+ GRR M REPS+ VRETAAEQ
Sbjct: 16 DSAPLLGGG-----TRRRGVLRRPS--LRGTA-RLLRQG-GRRAM-REPSLLVRETAAEQ 65
Query: 71 LEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHV 130
LEERQ+ WAYSRP++ LD+LWNL F++V+ VL S +E P VPLR+ I GYA+QC+ H+
Sbjct: 66 LEERQADWAYSRPVVALDLLWNLAFILVSAVVLVFSSDENPSVPLRIWIAGYAVQCVLHI 125
Query: 131 FCVSLE--FKRRRRGEGVVFGDSVSGSSSTTVTGDEEERF---HGE--NDSSVAKNLESA 183
CV++E F+ R+RG + D G+ ++ + DE+ HG N +AK+LES
Sbjct: 126 VCVAIEYRFRHRQRGGPSMAADEERGTDGSSSSTDEDAGVSIPHGRIGNYVRIAKHLESG 185
Query: 184 NTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVC 243
NT SF+WWI+GFYW++A GE L +PQLYWLC+ FLAFDV FV+ CV +AC+IGIAVC
Sbjct: 186 NTMFSFIWWIIGFYWVSAGGEVLTRDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVC 245
Query: 244 CCLPCILGILYALTER 259
CCLPCI+ ILYA++++
Sbjct: 246 CCLPCIIAILYAVSDQ 261
>gi|357137000|ref|XP_003570090.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
[Brachypodium distachyon]
Length = 354
Score = 234 bits (597), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 135/249 (54%), Positives = 175/249 (70%), Gaps = 23/249 (9%)
Query: 11 ETSPLLAHSLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQ 70
+++PLL R R +LRRP LRG A RLLR+ GRR M REPS+ VRETAAEQ
Sbjct: 16 DSAPLLGGG-----TRRRGVLRRPS--LRGTA-RLLRQG-GRRAM-REPSLLVRETAAEQ 65
Query: 71 LEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHV 130
LEERQ+ WAYSRP++ LD+LWNL F++V+ VL S +E P VPLR+ I GYA+QC+ H+
Sbjct: 66 LEERQADWAYSRPVVALDLLWNLAFILVSAVVLVFSSDENPSVPLRIWIAGYAVQCVLHI 125
Query: 131 FCVSLEFKRRRRGEGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFL 190
CV++E++ R R G ++ DEE G SS+AK+LES NT SF+
Sbjct: 126 VCVAIEYRFRHRQRG-----------GPSMAADEERGTDGS--SSIAKHLESGNTMFSFI 172
Query: 191 WWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCIL 250
WWI+GFYW++A GE L +PQLYWLC+ FLAFDV FV+ CV +AC+IGIAVCCCLPCI+
Sbjct: 173 WWIIGFYWVSAGGEVLTRDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCII 232
Query: 251 GILYALTER 259
ILYA++++
Sbjct: 233 AILYAVSDQ 241
>gi|357136996|ref|XP_003570088.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 3
[Brachypodium distachyon]
Length = 360
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 129/225 (57%), Positives = 165/225 (73%), Gaps = 16/225 (7%)
Query: 36 PPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVF 95
P LRG A RLLR+ GRR M REPS+ VRETAAEQLEERQ+ WAYSRP++ LD+LWNL F
Sbjct: 34 PSLRGTA-RLLRQG-GRRAM-REPSLLVRETAAEQLEERQADWAYSRPVVALDLLWNLAF 90
Query: 96 VIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGS 155
++VA VL +S +E P VPLR+ I GYA+QC+ H+ CV++E++ R G
Sbjct: 91 ILVAAVVLVLSSDESPSVPLRVWIAGYAVQCVLHMVCVAIEYRVRHGQRG---------- 140
Query: 156 SSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYW 215
++ DEE G SS+AK+LES NT SF+WWI+GFYW++A GE LI +PQLYW
Sbjct: 141 -GPSMAADEERGSDG--SSSIAKHLESGNTMFSFIWWIIGFYWVSAGGEVLIRDAPQLYW 197
Query: 216 LCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTERV 260
LC+ FLAFDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA++++V
Sbjct: 198 LCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVSDQV 242
>gi|296089059|emb|CBI38762.3| unnamed protein product [Vitis vinifera]
Length = 329
Score = 231 bits (588), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 127/216 (58%), Positives = 160/216 (74%), Gaps = 12/216 (5%)
Query: 56 LREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPL 115
+REPS+RVRETAAEQLEERQS WAYS+PI++LD++WNL FV+VA VL +S +E P PL
Sbjct: 1 MREPSMRVRETAAEQLEERQSDWAYSKPIVILDIVWNLAFVVVAMTVLVMSRDETPSTPL 60
Query: 116 RLRIVGYALQCLFHVFCVSLEFKRRRR----GEGVVFGDSVSGSSSTTVTGDE------- 164
RL I+GY LQC+ H+ CV +E+KRRRR G G SG S++ DE
Sbjct: 61 RLWIIGYGLQCVLHMVCVCVEYKRRRRLVSSGALERSGGWGSGHLSSSSGSDEGDPIDYR 120
Query: 165 -EERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAF 223
E R E+++SVAK+LESANT SF+WWI+GFYW++A G+ L SPQLYWLC+ FLAF
Sbjct: 121 VEVRNRDEDETSVAKHLESANTMFSFIWWIIGFYWVSAGGQDLTRDSPQLYWLCIVFLAF 180
Query: 224 DVVFVMICVGVACLIGIAVCCCLPCILGILYALTER 259
DV FV+ICV VAC+IGIAVCCCLPCI+ ILY + ++
Sbjct: 181 DVFFVVICVAVACVIGIAVCCCLPCIIAILYTVADQ 216
>gi|326498537|dbj|BAJ98696.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 373
Score = 231 bits (588), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 137/263 (52%), Positives = 180/263 (68%), Gaps = 9/263 (3%)
Query: 3 MNPPADAAETSPLLAHSLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVR 62
M P ++ S L S P RR P LRG A RLLR+ GRR M REPS+
Sbjct: 1 MATPRSSSPRSDALLDSAPLLGGGGRRRGALRRPSLRGTA-RLLRQG-GRRAM-REPSLL 57
Query: 63 VRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGY 122
VRETAAEQLEERQ+ WAYSRP++ LD+LWNL F++ VL +S +E P VPLR+ I GY
Sbjct: 58 VRETAAEQLEERQADWAYSRPVVALDLLWNLAFILTTAVVLVLSGDESPSVPLRIWIAGY 117
Query: 123 ALQCLFHVFCVSLEFKRR--RRGEGVVFGDSVSGS--SSTTVTGDEEERFHGEND--SSV 176
A+QC+ H+ CV++E++ R +RG + D G+ SS+++ E HG +SV
Sbjct: 118 AVQCVVHMVCVAIEYRVRHGQRGGSSMAADEERGTDGSSSSIDDAGESGPHGRIGYFASV 177
Query: 177 AKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC 236
AK+LESANT SF+WWI+GFYW++A G+ L +PQLYWLC+ FLAFDV FV+ CV +AC
Sbjct: 178 AKHLESANTMFSFIWWIIGFYWVSAGGQVLTHDAPQLYWLCIVFLAFDVFFVVFCVALAC 237
Query: 237 LIGIAVCCCLPCILGILYALTER 259
+IGIAVCCCLPCI+ ILYA++++
Sbjct: 238 IIGIAVCCCLPCIIAILYAVSDQ 260
>gi|357136994|ref|XP_003570087.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
[Brachypodium distachyon]
Length = 354
Score = 230 bits (586), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 128/224 (57%), Positives = 164/224 (73%), Gaps = 16/224 (7%)
Query: 36 PPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVF 95
P LRG A RLLR+ GRR M REPS+ VRETAAEQLEERQ+ WAYSRP++ LD+LWNL F
Sbjct: 34 PSLRGTA-RLLRQG-GRRAM-REPSLLVRETAAEQLEERQADWAYSRPVVALDLLWNLAF 90
Query: 96 VIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGS 155
++VA VL +S +E P VPLR+ I GYA+QC+ H+ CV++E++ R G
Sbjct: 91 ILVAAVVLVLSSDESPSVPLRVWIAGYAVQCVLHMVCVAIEYRVRHGQRG---------- 140
Query: 156 SSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYW 215
++ DEE G SS+AK+LES NT SF+WWI+GFYW++A GE LI +PQLYW
Sbjct: 141 -GPSMAADEERGSDG--SSSIAKHLESGNTMFSFIWWIIGFYWVSAGGEVLIRDAPQLYW 197
Query: 216 LCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTER 259
LC+ FLAFDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA++++
Sbjct: 198 LCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVSDQ 241
>gi|357137002|ref|XP_003570091.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 3
[Brachypodium distachyon]
Length = 364
Score = 229 bits (585), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 134/254 (52%), Positives = 176/254 (69%), Gaps = 23/254 (9%)
Query: 11 ETSPLLAHSLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQ 70
+++PLL R R +LRRP LRG A RLLR+ GRR M REPS+ VRETAAEQ
Sbjct: 16 DSAPLLGGG-----TRRRGVLRRPS--LRGTA-RLLRQG-GRRAM-REPSLLVRETAAEQ 65
Query: 71 LEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHV 130
LEERQ+ WAYSRP++ LD+LWNL F++V+ VL S +E P VPLR+ I GYA+QC+ H+
Sbjct: 66 LEERQADWAYSRPVVALDLLWNLAFILVSAVVLVFSSDENPSVPLRIWIAGYAVQCVLHI 125
Query: 131 FCVSLE--FKRRRRGEGVVFGDSVSGSSSTTVTGDEEERF---HGENDSSVAKNLESANT 185
CV++E F+ R+RG + D G+ ++ + DE+ HG LES NT
Sbjct: 126 VCVAIEYRFRHRQRGGPSMAADEERGTDGSSSSTDEDAGVSIPHG--------RLESGNT 177
Query: 186 FLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCC 245
SF+WWI+GFYW++A GE L +PQLYWLC+ FLAFDV FV+ CV +AC+IGIAVCCC
Sbjct: 178 MFSFIWWIIGFYWVSAGGEVLTRDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCC 237
Query: 246 LPCILGILYALTER 259
LPCI+ ILYA++++
Sbjct: 238 LPCIIAILYAVSDQ 251
>gi|4539459|emb|CAB39939.1| putative protein [Arabidopsis thaliana]
gi|7267868|emb|CAB78211.1| putative protein [Arabidopsis thaliana]
Length = 419
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 136/258 (52%), Positives = 174/258 (67%), Gaps = 16/258 (6%)
Query: 6 PADAAETSPLLAHSLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRE 65
P T + S P H R+ LR AAR LR A RR+M REPS+ VRE
Sbjct: 40 PPTVTRTISVDEESNPIHRSARRQGLRE--------AARFLRHAGSRRMM-REPSMLVRE 90
Query: 66 TAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQ 125
TAAEQLEERQS WAYS+P++ LD+LWNL FV + AVL +S +EKP +PLR+ +VGY +Q
Sbjct: 91 TAAEQLEERQSDWAYSKPVVFLDILWNLAFVAIGVAVLILSRDEKPNMPLRVWVVGYGIQ 150
Query: 126 CLFHVFCVSLEFKRRRRG----EGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLE 181
C H+ CV +E++RRRR +G G + S S E+R GE S+ AK+LE
Sbjct: 151 CWLHMACVCVEYRRRRRRRHPEDGGGSGLTNSSSQQYVSLAQLEDR--GET-SNPAKHLE 207
Query: 182 SANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIA 241
SANT SF+WWI+GFYW++A G+TL S SPQLYWLC+ FL FDV FV+ CV +AC+IG+A
Sbjct: 208 SANTMFSFIWWIIGFYWVSAGGQTLSSDSPQLYWLCIIFLGFDVFFVVFCVALACVIGLA 267
Query: 242 VCCCLPCILGILYALTER 259
VCCCLPCI+ ILYA+ ++
Sbjct: 268 VCCCLPCIIAILYAVADQ 285
>gi|18413629|ref|NP_567379.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
gi|75331789|sp|Q93Z92.1|RING4_ARATH RecName: Full=E3 ubiquitin-protein ligase At4g11680; AltName:
Full=RING finger protein At4g11680
gi|16323218|gb|AAL15343.1| AT4g11680/T5C23_110 [Arabidopsis thaliana]
gi|38564282|gb|AAR23720.1| At4g11680/T5C23_110 [Arabidopsis thaliana]
gi|66865946|gb|AAY57607.1| RING finger family protein [Arabidopsis thaliana]
gi|332657638|gb|AEE83038.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
Length = 390
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 136/258 (52%), Positives = 174/258 (67%), Gaps = 16/258 (6%)
Query: 6 PADAAETSPLLAHSLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRE 65
P T + S P H R+ LR AAR LR A RR+M REPS+ VRE
Sbjct: 40 PPTVTRTISVDEESNPIHRSARRQGLRE--------AARFLRHAGSRRMM-REPSMLVRE 90
Query: 66 TAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQ 125
TAAEQLEERQS WAYS+P++ LD+LWNL FV + AVL +S +EKP +PLR+ +VGY +Q
Sbjct: 91 TAAEQLEERQSDWAYSKPVVFLDILWNLAFVAIGVAVLILSRDEKPNMPLRVWVVGYGIQ 150
Query: 126 CLFHVFCVSLEFKRRRRG----EGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLE 181
C H+ CV +E++RRRR +G G + S S E+R GE S+ AK+LE
Sbjct: 151 CWLHMACVCVEYRRRRRRRHPEDGGGSGLTNSSSQQYVSLAQLEDR--GET-SNPAKHLE 207
Query: 182 SANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIA 241
SANT SF+WWI+GFYW++A G+TL S SPQLYWLC+ FL FDV FV+ CV +AC+IG+A
Sbjct: 208 SANTMFSFIWWIIGFYWVSAGGQTLSSDSPQLYWLCIIFLGFDVFFVVFCVALACVIGLA 267
Query: 242 VCCCLPCILGILYALTER 259
VCCCLPCI+ ILYA+ ++
Sbjct: 268 VCCCLPCIIAILYAVADQ 285
>gi|357507063|ref|XP_003623820.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|355498835|gb|AES80038.1| E3 ubiquitin-protein ligase [Medicago truncatula]
Length = 366
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 142/265 (53%), Positives = 179/265 (67%), Gaps = 21/265 (7%)
Query: 4 NPPAD--AAETSPLLAHSLPDHLIRSRRLLRRP---PPPLRGAAARLLRRASGRRLMLRE 58
NP D A +T P L RR LRR PPLR A RRAS R+MLRE
Sbjct: 5 NPTLDSTAGDTEPFL-----------RRTLRRTIHHTPPLR-TATHFFRRASSHRMMLRE 52
Query: 59 PSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLR 118
PSVRVRE AA ++E RQ WAYS+P++ LD+ WNL F++V+ VLG+S E+P VPLR+
Sbjct: 53 PSVRVRERAATEVENRQREWAYSKPVVALDIAWNLSFLVVSVVVLGLSSEEEPCVPLRVW 112
Query: 119 IVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSS----STTVTGDEEERFHGENDS 174
I+GY LQ L H CV LEF+RRRRG + DSV + ++ + + H ++
Sbjct: 113 ILGYLLQGLVHSVCVVLEFRRRRRGSYLEDDDSVLENGLRWSFSSESDSDFASEHESEEN 172
Query: 175 SVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGV 234
S+ K++ESANT LSF+WWI+GFYW+T G++L SPQLYWLC+TFLAFDVV V+ICV V
Sbjct: 173 SIIKHIESANTILSFIWWILGFYWVTVGGQSLTKDSPQLYWLCITFLAFDVVIVVICVAV 232
Query: 235 ACLIGIAVCCCLPCILGILYALTER 259
ACLIGIAVCCCLPCIL ILYA+ ++
Sbjct: 233 ACLIGIAVCCCLPCILAILYAVADQ 257
>gi|297599741|ref|NP_001047717.2| Os02g0674700 [Oryza sativa Japonica Group]
gi|255671161|dbj|BAF09631.2| Os02g0674700 [Oryza sativa Japonica Group]
Length = 379
Score = 228 bits (580), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 129/231 (55%), Positives = 170/231 (73%), Gaps = 10/231 (4%)
Query: 36 PPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVF 95
P LRGAA R LRR SGRR M REPS+ VRE AA+QLEERQ+ WAYSRP++ LD+LWNL F
Sbjct: 39 PSLRGAA-RFLRR-SGRRAM-REPSLLVREAAADQLEERQADWAYSRPVVALDLLWNLAF 95
Query: 96 VIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRR--RGEGVVFGDSVS 153
++VA AVL +S E P +PLRL IVGYA+QC+ H+ CV++E++ RR GE + D +
Sbjct: 96 ILVAAAVLALSREESPSMPLRLWIVGYAVQCVLHMACVAIEYRMRRGQSGESPMAADEET 155
Query: 154 GSSSTTV-----TGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLIS 208
G+ ++ G+ R + +AK+LESANT SF+WWI+GFYW++A G+ L
Sbjct: 156 GTDGSSSSSDEDAGERAPRGRNGDYVRIAKHLESANTMFSFIWWIIGFYWVSAGGQVLTH 215
Query: 209 CSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTER 259
+PQLYWLC+ FLAFDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA++++
Sbjct: 216 DAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVSDQ 266
>gi|326498713|dbj|BAK02342.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 374
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 137/236 (58%), Positives = 174/236 (73%), Gaps = 12/236 (5%)
Query: 31 LRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVL 90
LRRP LRGAA RLLRR SGRR M REPS+ VRE AAE LEERQ+ WAYSRP++ LD+L
Sbjct: 34 LRRPS--LRGAA-RLLRR-SGRRAM-REPSMLVREAAAEHLEERQADWAYSRPVVALDLL 88
Query: 91 WNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRR--RGEGVVF 148
WN+ F+ VA VL +S NE +PLR + GYALQC+ H+ CV++E++ RR RG G V
Sbjct: 89 WNISFITVAAVVLVLSRNENSPMPLRTWVAGYALQCIVHMVCVAVEYRMRRSQRGGGPVP 148
Query: 149 GDSVSGSSSTTVTGDE---EERFHGENDS--SVAKNLESANTFLSFLWWIVGFYWITASG 203
D GS ++ + DE E + G + S+AK+LESANT SF+WWI+GFYWI+A G
Sbjct: 149 ADEERGSDVSSSSSDEDASENQLRGRDTDYVSLAKHLESANTMFSFIWWIIGFYWISAGG 208
Query: 204 ETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTER 259
E +I +PQLYWLC+ FLAFDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA++++
Sbjct: 209 EEVIRDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVSDQ 264
>gi|148908123|gb|ABR17177.1| unknown [Picea sitchensis]
Length = 373
Score = 226 bits (577), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 127/271 (46%), Positives = 163/271 (60%), Gaps = 22/271 (8%)
Query: 1 MRMNPPADAAETSPLLAHSLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPS 60
M P ++SPLL ++ R +AAR LRRA R M+REPS
Sbjct: 1 MERTRPDTGVDSSPLLESGTTNNEARGSAY---------QSAARFLRRAG-GRRMMREPS 50
Query: 61 VRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIV 120
+ VRE AA+QLEERQS WAYS+P+++LD+LWNL FV+V+ +L ++ E+P PLR+ I
Sbjct: 51 MMVRENAAQQLEERQSDWAYSKPVVMLDLLWNLSFVVVSVVILTSTLEERPTTPLRVWIA 110
Query: 121 GYALQCLFHVFCVSLEFKRRRRGEG------------VVFGDSVSGSSSTTVTGDEEERF 168
GYALQCL H+ V+ E+ RR R G+ V+ E R
Sbjct: 111 GYALQCLLHMIYVAYEYTRRNRQRSPSVGSAGGSESASSAGEQVNSQVGRAPQEAETGRQ 170
Query: 169 HGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFV 228
E SS+AK LES NT SF WWIVGFYW+ A G++L +P+LYWLC+ FLAFDV FV
Sbjct: 171 ETEERSSIAKRLESVNTMFSFFWWIVGFYWLLAGGKSLAEDAPRLYWLCIVFLAFDVFFV 230
Query: 229 MICVGVACLIGIAVCCCLPCILGILYALTER 259
C VAC+IGIAVCCCLPCI+ ILYA+ +
Sbjct: 231 AFCAAVACMIGIAVCCCLPCIIAILYAVANQ 261
>gi|326489497|dbj|BAK01729.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 377
Score = 226 bits (577), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 137/236 (58%), Positives = 174/236 (73%), Gaps = 12/236 (5%)
Query: 31 LRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVL 90
LRRP LRGAA RLLRR SGRR M REPS+ VRE AAE LEERQ+ WAYSRP++ LD+L
Sbjct: 34 LRRPS--LRGAA-RLLRR-SGRRAM-REPSMLVREAAAEHLEERQADWAYSRPVVALDLL 88
Query: 91 WNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRR--RGEGVVF 148
WN+ F+ VA VL +S NE +PLR + GYALQC+ H+ CV++E++ RR RG G V
Sbjct: 89 WNISFITVAAVVLVLSRNENSPMPLRTWVAGYALQCIVHMVCVAVEYRMRRSQRGGGPVP 148
Query: 149 GDSVSGSSSTTVTGDE---EERFHGENDS--SVAKNLESANTFLSFLWWIVGFYWITASG 203
D GS ++ + DE E + G + S+AK+LESANT SF+WWI+GFYWI+A G
Sbjct: 149 ADEERGSDVSSSSSDEDASENQLRGRDTDYVSLAKHLESANTMFSFIWWIIGFYWISAGG 208
Query: 204 ETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTER 259
E +I +PQLYWLC+ FLAFDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA++++
Sbjct: 209 EEVIRDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVSDQ 264
>gi|326524540|dbj|BAK00653.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 377
Score = 226 bits (577), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 137/236 (58%), Positives = 174/236 (73%), Gaps = 12/236 (5%)
Query: 31 LRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVL 90
LRRP LRGAA RLLRR SGRR M REPS+ VRE AAE LEERQ+ WAYSRP++ LD+L
Sbjct: 34 LRRPS--LRGAA-RLLRR-SGRRAM-REPSMLVREAAAEHLEERQADWAYSRPVVALDLL 88
Query: 91 WNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRR--RGEGVVF 148
WN+ F+ VA VL +S NE +PLR + GYALQC+ H+ CV++E++ RR RG G V
Sbjct: 89 WNISFITVAAVVLVLSRNENSPMPLRTWVAGYALQCIVHMVCVAVEYRMRRSQRGGGPVP 148
Query: 149 GDSVSGSSSTTVTGDE---EERFHGENDS--SVAKNLESANTFLSFLWWIVGFYWITASG 203
D GS ++ + DE E + G + S+AK+LESANT SF+WWI+GFYWI+A G
Sbjct: 149 ADEERGSDVSSSSSDEDASENQLRGRDTDYVSLAKHLESANTMFSFIWWIIGFYWISAGG 208
Query: 204 ETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTER 259
E +I +PQLYWLC+ FLAFDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA++++
Sbjct: 209 EEVIRDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVSDQ 264
>gi|148910158|gb|ABR18161.1| unknown [Picea sitchensis]
Length = 373
Score = 226 bits (575), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 126/271 (46%), Positives = 163/271 (60%), Gaps = 22/271 (8%)
Query: 1 MRMNPPADAAETSPLLAHSLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPS 60
M P ++SPLL ++ R +AAR LRRA R M+REPS
Sbjct: 1 MERTRPDTGVDSSPLLESGTTNNEARGSAY---------QSAARFLRRAG-GRRMMREPS 50
Query: 61 VRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIV 120
+ VRE AA+QLEERQS WAYS+P+++LD+LWNL FV+V+ +L ++ E+P P+R+ I
Sbjct: 51 MMVRENAAQQLEERQSDWAYSKPVVMLDLLWNLSFVVVSVVILTSTLEERPTTPMRVWIA 110
Query: 121 GYALQCLFHVFCVSLEFKRRRRGEG------------VVFGDSVSGSSSTTVTGDEEERF 168
GYALQCL H+ V+ E+ RR R G+ V+ E R
Sbjct: 111 GYALQCLLHMIYVAYEYTRRNRQRSPSVGSAGGSESASSAGEQVNSQVGRAPQEAETGRQ 170
Query: 169 HGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFV 228
E SS+AK LES NT SF WWIVGFYW+ A G++L +P+LYWLC+ FLAFDV FV
Sbjct: 171 ETEERSSIAKRLESVNTMFSFFWWIVGFYWLLAGGKSLAEDAPRLYWLCIVFLAFDVFFV 230
Query: 229 MICVGVACLIGIAVCCCLPCILGILYALTER 259
C VAC+IGIAVCCCLPCI+ ILYA+ +
Sbjct: 231 AFCAAVACMIGIAVCCCLPCIIAILYAVANQ 261
>gi|356539808|ref|XP_003538385.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Glycine max]
Length = 387
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 136/270 (50%), Positives = 180/270 (66%), Gaps = 22/270 (8%)
Query: 8 DAAETSPLLAHSL--PDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRE 65
D +++PLLA+S D L RR RR AA+ LR+ASGRR+M REPS+ VRE
Sbjct: 10 DIVDSTPLLANSAGSSDDLTSGRRFARRQ---RLRQAAQFLRQASGRRMM-REPSMLVRE 65
Query: 66 TAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQ 125
AAEQLEERQS WAYS+P++VLD++WNL FV+VA VL +S +E P +PLRL IVGYA+Q
Sbjct: 66 AAAEQLEERQSDWAYSKPVVVLDIVWNLAFVVVAGTVLVLSASEAPGMPLRLWIVGYAMQ 125
Query: 126 CLFHVFCVSLEFK-------------RRRRGEGVVFGDSVSGSSSTTVTGDEEERFHGEN 172
C+ H+ V +E++ + R G S S + + + G+
Sbjct: 126 CVLHMVFVCVEYRRRRRQQPAAASSVQDRVGSSSGNLSVSSREGSASASASAQNVLLGQL 185
Query: 173 D---SSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVM 229
D +SVAK+LESANT SF+WWI+GFYW++A G+ L SPQLYWLC+ FL FDV FV+
Sbjct: 186 DDESTSVAKHLESANTMFSFVWWIIGFYWVSAGGQALAQDSPQLYWLCIIFLGFDVFFVV 245
Query: 230 ICVGVACLIGIAVCCCLPCILGILYALTER 259
CV +AC+IGIAVCCCLPCI+ +LYA+T++
Sbjct: 246 FCVALACIIGIAVCCCLPCIIALLYAVTDQ 275
>gi|357521319|ref|XP_003630948.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|355524970|gb|AET05424.1| E3 ubiquitin-protein ligase [Medicago truncatula]
Length = 336
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 121/246 (49%), Positives = 154/246 (62%), Gaps = 17/246 (6%)
Query: 12 TSPLLAHSLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQL 71
++P AH+ L+R RR+ R P A LL R R PSV VRETAA +L
Sbjct: 2 STPNYAHA---PLLRPRRVGRTP------VLALLLGR--------RGPSVLVRETAAREL 44
Query: 72 EERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVF 131
EER++ W YS+P+++LDV WN VFV+VA +LG S++E P P+RL I GYA+QCL HV
Sbjct: 45 EERRADWGYSKPVVLLDVTWNTVFVVVAAVMLGCSVDENPNTPIRLWIFGYAVQCLVHVA 104
Query: 132 CVSLEFKRRRRGEGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLW 191
V LE++RR G D S D++ F + S AK S NT LS LW
Sbjct: 105 LVLLEYRRRNVIGGGRERDEESLDDVNDSEEDDDVEFLNSSSSGFAKRCSSLNTMLSLLW 164
Query: 192 WIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILG 251
W+VGFYW+ G+ LI +P+LYWL V FLAFDV F + CV +ACLIGIA+CCCLPCI+G
Sbjct: 165 WMVGFYWVVNGGDILIQDAPRLYWLAVVFLAFDVFFAVFCVALACLIGIALCCCLPCIIG 224
Query: 252 ILYALT 257
ILYA+
Sbjct: 225 ILYAVA 230
>gi|357136992|ref|XP_003570086.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
[Brachypodium distachyon]
Length = 374
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 132/231 (57%), Positives = 172/231 (74%), Gaps = 10/231 (4%)
Query: 36 PPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVF 95
P LRG A RLLR+ GRR M REPS+ VRETAAEQLEERQ+ WAYSRP++ LD+LWNL F
Sbjct: 34 PSLRGTA-RLLRQG-GRRAM-REPSLLVRETAAEQLEERQADWAYSRPVVALDLLWNLAF 90
Query: 96 VIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRR--RRGEGVVFGDSVS 153
++VA VL +S +E P VPLR+ I GYA+QC+ H+ CV++E++ R +RG + D
Sbjct: 91 ILVAAVVLVLSSDESPSVPLRVWIAGYAVQCVLHMVCVAIEYRVRHGQRGGPSMAADEER 150
Query: 154 GSSSTTVTGDE---EERFHGE--NDSSVAKNLESANTFLSFLWWIVGFYWITASGETLIS 208
GS ++ + DE E HG + S+AK+LES NT SF+WWI+GFYW++A GE LI
Sbjct: 151 GSDGSSSSTDEDAGENVTHGRIGDCVSIAKHLESGNTMFSFIWWIIGFYWVSAGGEVLIR 210
Query: 209 CSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTER 259
+PQLYWLC+ FLAFDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA++++
Sbjct: 211 DAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVSDQ 261
>gi|297813655|ref|XP_002874711.1| hypothetical protein ARALYDRAFT_327304 [Arabidopsis lyrata subsp.
lyrata]
gi|297320548|gb|EFH50970.1| hypothetical protein ARALYDRAFT_327304 [Arabidopsis lyrata subsp.
lyrata]
Length = 420
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 125/225 (55%), Positives = 162/225 (72%), Gaps = 11/225 (4%)
Query: 42 AARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFA 101
AAR LR A RR M+REPS+ VRETAAEQLEERQS WAYS+P++ LD+LWNL FV + A
Sbjct: 67 AARFLRHAGSRR-MVREPSMLVRETAAEQLEERQSDWAYSKPVVFLDILWNLAFVAIGVA 125
Query: 102 VLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVT 161
VL +S +EKP +PLR+ +VGY +QC H+ CV +E++RRRR + G T +
Sbjct: 126 VLILSRDEKPNMPLRVWVVGYGIQCWLHMACVCVEYRRRRRRRHRSSSEDGGGPGFTNSS 185
Query: 162 GDE-------EERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLY 214
+ E+R GE S+ AK+LESANT SF+WWI+GFYW++A G+TL SPQLY
Sbjct: 186 QQQYVSLAQLEDR--GET-SNPAKHLESANTMFSFIWWIIGFYWVSAGGQTLSGDSPQLY 242
Query: 215 WLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTER 259
WLC+ FL FDV FV+ CV +AC+IG+AVCCCLPCI+ ILYA+ ++
Sbjct: 243 WLCIIFLGFDVFFVVFCVALACVIGLAVCCCLPCIIAILYAVADQ 287
>gi|50253212|dbj|BAD29468.1| ring zinc finger protein-like [Oryza sativa Japonica Group]
Length = 399
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 135/251 (53%), Positives = 178/251 (70%), Gaps = 30/251 (11%)
Query: 36 PPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVF 95
P LRGAA R LRR SGRR M REPS+ VRE AA+QLEERQ+ WAYSRP++ LD+LWNL F
Sbjct: 39 PSLRGAA-RFLRR-SGRRAM-REPSLLVREAAADQLEERQADWAYSRPVVALDLLWNLAF 95
Query: 96 VIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRR--RGEGVVFGDSVS 153
++VA AVL +S E P +PLRL IVGYA+QC+ H+ CV++E++ RR GE + D +
Sbjct: 96 ILVAAAVLALSREESPSMPLRLWIVGYAVQCVLHMACVAIEYRMRRGQSGESPMAADEET 155
Query: 154 GSSSTTVTGDEE--ER-----------------FHGENDS------SVAKNLESANTFLS 188
G+ ++ + DE+ ER F+ +N S S+AK+LESANT S
Sbjct: 156 GTDGSSSSSDEDAGERAPRGRNGDYVRSVGHHIFYPDNFSVHKSACSIAKHLESANTMFS 215
Query: 189 FLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPC 248
F+WWI+GFYW++A G+ L +PQLYWLC+ FLAFDV FV+ CV +AC+IGIAVCCCLPC
Sbjct: 216 FIWWIIGFYWVSAGGQVLTHDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPC 275
Query: 249 ILGILYALTER 259
I+ ILYA++++
Sbjct: 276 IIAILYAVSDQ 286
>gi|357481703|ref|XP_003611137.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|355512472|gb|AES94095.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|388506770|gb|AFK41451.1| unknown [Medicago truncatula]
Length = 387
Score = 223 bits (569), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 127/230 (55%), Positives = 162/230 (70%), Gaps = 16/230 (6%)
Query: 45 LLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLG 104
LR+ASGRR M REPSV VRE AAEQLEERQS WAYS+P+++LD++WN FVIVA L
Sbjct: 47 FLRQASGRRTM-REPSVVVREAAAEQLEERQSDWAYSKPVVILDIVWNFAFVIVAGTALF 105
Query: 105 VSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGS--------- 155
+S NE PE+PLRL I GY LQC+ H+ CV E++RRRR + ++V+GS
Sbjct: 106 LSRNEAPEMPLRLWIAGYVLQCVLHMVCVCFEYRRRRRFQRSSSSNAVAGSDRIGSGNFS 165
Query: 156 ----SSTTVTGDEEERF--HGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISC 209
S + V+G E +SVAK+LESANT SF+WWI+GFYW++A G+ L
Sbjct: 166 SREGSRSAVSGSSYVSLAQFDEESTSVAKHLESANTMFSFIWWIIGFYWVSAGGQALAQD 225
Query: 210 SPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTER 259
SPQLYWLC+ FL FDV FV+ CV +AC+IGIAVCCCLPCI+ +LYA+ ++
Sbjct: 226 SPQLYWLCIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIALLYAVADQ 275
>gi|255537347|ref|XP_002509740.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
gi|223549639|gb|EEF51127.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
Length = 383
Score = 223 bits (569), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 142/260 (54%), Positives = 177/260 (68%), Gaps = 16/260 (6%)
Query: 8 DAAETSPLLAH-SLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRET 66
D +T+PLL+ S + SRR R AAR LRRAS R M+REPS+ VRET
Sbjct: 18 DIVDTTPLLSSGSQGESNSSSRRQSLR-------EAARFLRRAS-SRRMMREPSMLVRET 69
Query: 67 AAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQC 126
AAEQLEERQS WAYS+P+++LD+LWN FV VA VL +S E P +PLRL IVGY LQC
Sbjct: 70 AAEQLEERQSDWAYSKPVVILDILWNFAFVAVAIGVLIMSRKEDPSMPLRLWIVGYGLQC 129
Query: 127 LFHVFCVSLEFKRRRRGEGVV-FGDSVSGSSSTTVTGDEEERF------HGENDSSVAKN 179
+ H+ CV +E++RRRR V FG G+ S+ GD E + SSVAK+
Sbjct: 130 VLHMVCVCVEYRRRRRRRRRVGFGIGSDGNLSSGSRGDSGEYVTLAQLEDHDGTSSVAKH 189
Query: 180 LESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIG 239
LESANT SF+WWI+GFYW++A G+ L SPQLYWLC+ FL FDV FV+ CV +AC+IG
Sbjct: 190 LESANTMFSFIWWIIGFYWVSAGGQALSHNSPQLYWLCIIFLGFDVFFVVFCVALACIIG 249
Query: 240 IAVCCCLPCILGILYALTER 259
IAVCCCLPCI+ ILYA+ ++
Sbjct: 250 IAVCCCLPCIIAILYAVADQ 269
>gi|224286153|gb|ACN40787.1| unknown [Picea sitchensis]
Length = 397
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 141/275 (51%), Positives = 182/275 (66%), Gaps = 24/275 (8%)
Query: 6 PADAAETSPLLAHSL--PDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRV 63
P A +T+PLL + P+ R L R ++GAA R LRRAS RR+M REPS+ V
Sbjct: 14 PDVAVDTTPLLGNGTGSPNASDDGARSLSRRAS-IQGAA-RFLRRASSRRIM-REPSMLV 70
Query: 64 RETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYA 123
RETAAEQLEERQS WAYSRP++VLD++WNL FV+VA VL +S +E P +P+R+ +VGYA
Sbjct: 71 RETAAEQLEERQSDWAYSRPVVVLDIIWNLAFVVVATVVLVLSRHENPNMPVRVWVVGYA 130
Query: 124 LQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVT---------GDEEERFHGEND- 173
LQCL H+ CV E++RR +S S T G+++E ++
Sbjct: 131 LQCLLHMICVCFEYRRRHSNAQQQRSNSGGQSGHTNNNNNSANQQSPGEQQESDDATDEE 190
Query: 174 ---------SSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFD 224
+S+AK LESANT SF+WWIVGFYWI+A G+ L +PQLYWLCV FLAFD
Sbjct: 191 VDEVLSTERTSIAKRLESANTMFSFIWWIVGFYWISAGGQILTHDAPQLYWLCVVFLAFD 250
Query: 225 VVFVMICVGVACLIGIAVCCCLPCILGILYALTER 259
V FV+ CV +AC+IGIAVCCCLPCI+ ILYA+ ++
Sbjct: 251 VFFVVFCVALACVIGIAVCCCLPCIIAILYAVADQ 285
>gi|297840183|ref|XP_002887973.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297333814|gb|EFH64232.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 373
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 132/262 (50%), Positives = 176/262 (67%), Gaps = 19/262 (7%)
Query: 9 AAETSPLLAHSLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRETAA 68
E +PL+ L D R + R+ LR AARLLR AS R+M+REPS+ VRE AA
Sbjct: 6 TTEATPLI---LTDGGGGGRSVRRQG---LR-EAARLLRHASSGRMMMREPSMLVREAAA 58
Query: 69 EQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLF 128
EQLEERQS WAYS+P++VLD +WNL FV VA AVL +S +E P +PLR+ ++GY LQC+
Sbjct: 59 EQLEERQSDWAYSKPVVVLDFVWNLAFVAVATAVLVLSSDENPNMPLRVWVIGYGLQCMM 118
Query: 129 HVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVTG-----DEEERF------HGENDSSVA 177
H+ CV +E++RR S SS G + ++R+ EN+S A
Sbjct: 119 HMVCVCVEYRRRNSRRRRDMSPRSSSSSMEEEDGLGLSRNSDDRYLELGQLENENNS-FA 177
Query: 178 KNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACL 237
K+LESANT +SF+WW++GFYW+++ G+ L SPQLYWLC+ FL FDV FV+ CV +AC+
Sbjct: 178 KHLESANTMISFIWWVIGFYWVSSGGQELAQGSPQLYWLCIVFLGFDVFFVVFCVALACV 237
Query: 238 IGIAVCCCLPCILGILYALTER 259
IGIAVCCCLPCI+ +LYA+ E+
Sbjct: 238 IGIAVCCCLPCIIAVLYAVAEQ 259
>gi|357122910|ref|XP_003563156.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
[Brachypodium distachyon]
Length = 362
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 132/225 (58%), Positives = 166/225 (73%), Gaps = 13/225 (5%)
Query: 36 PPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVF 95
P LRGAA R LRR RR+M REPSV VRETAAE LEERQ+ WAYS+P++VLDVLWNL F
Sbjct: 38 PSLRGAA-RFLRRTGSRRMM-REPSVAVRETAAEHLEERQTDWAYSKPVVVLDVLWNLAF 95
Query: 96 VIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGS 155
V VA AVL S+ E+P VPLR + GY LQCL HV CV++E+KRR R ++ SG
Sbjct: 96 VAVAAAVLAASLTERPAVPLRFWLAGYVLQCLLHVLCVAVEYKRRCR-------EARSGG 148
Query: 156 SSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYW 215
+ D+++ G+ S+ K+LES NT SF+WWI+GFYW++A G+TL +PQLYW
Sbjct: 149 AGV----DQDDAGDGDLKISIVKHLESGNTMFSFIWWIIGFYWVSAGGQTLSQDAPQLYW 204
Query: 216 LCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTERV 260
L + FLAFDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA+T++V
Sbjct: 205 LSIVFLAFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVTDQV 249
>gi|226531600|ref|NP_001147541.1| protein binding protein [Zea mays]
gi|195612076|gb|ACG27868.1| protein binding protein [Zea mays]
Length = 375
Score = 220 bits (560), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 128/231 (55%), Positives = 167/231 (72%), Gaps = 10/231 (4%)
Query: 36 PPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVF 95
P LRGAA RLLR GRR M REPS+ VRE AAEQLEERQ+ WAYSRP++ LD LWNL F
Sbjct: 35 PSLRGAA-RLLR-CGGRRAM-REPSLLVREAAAEQLEERQADWAYSRPVVALDFLWNLAF 91
Query: 96 VIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRR--RRGEGVVFGDSVS 153
++V+ VL +S +E P +PLR I GY QC+ H+ CV++E+ R + G + D S
Sbjct: 92 ILVSAVVLVLSHHESPSMPLRFWIAGYTAQCVVHMVCVAIEYCLRYGQLGGSPIPVDEES 151
Query: 154 GSSSTTVTGDEEERFHGENDSS-----VAKNLESANTFLSFLWWIVGFYWITASGETLIS 208
GS S + + +++R HG + S +AK+LESANT SF+WWI+GFYW++A GE L
Sbjct: 152 GSGSASSSSSDDDREHGSHSRSGDCLSIAKHLESANTMFSFVWWIIGFYWVSAGGEVLTR 211
Query: 209 CSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTER 259
+PQLYWLC+ FLAFDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA++++
Sbjct: 212 DAPQLYWLCIIFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVSDQ 262
>gi|357122908|ref|XP_003563155.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
[Brachypodium distachyon]
Length = 359
Score = 219 bits (558), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 131/224 (58%), Positives = 165/224 (73%), Gaps = 13/224 (5%)
Query: 36 PPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVF 95
P LRGAA R LRR RR+M REPSV VRETAAE LEERQ+ WAYS+P++VLDVLWNL F
Sbjct: 38 PSLRGAA-RFLRRTGSRRMM-REPSVAVRETAAEHLEERQTDWAYSKPVVVLDVLWNLAF 95
Query: 96 VIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGS 155
V VA AVL S+ E+P VPLR + GY LQCL HV CV++E+KRR R ++ SG
Sbjct: 96 VAVAAAVLAASLTERPAVPLRFWLAGYVLQCLLHVLCVAVEYKRRCR-------EARSGG 148
Query: 156 SSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYW 215
+ D+++ G+ S+ K+LES NT SF+WWI+GFYW++A G+TL +PQLYW
Sbjct: 149 AGV----DQDDAGDGDLKISIVKHLESGNTMFSFIWWIIGFYWVSAGGQTLSQDAPQLYW 204
Query: 216 LCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTER 259
L + FLAFDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA+T++
Sbjct: 205 LSIVFLAFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVTDQ 248
>gi|212276082|ref|NP_001130198.1| uncharacterized LOC100191292 [Zea mays]
gi|194688522|gb|ACF78345.1| unknown [Zea mays]
gi|194702646|gb|ACF85407.1| unknown [Zea mays]
gi|413919337|gb|AFW59269.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 380
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 132/232 (56%), Positives = 171/232 (73%), Gaps = 11/232 (4%)
Query: 36 PPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVF 95
P LRGAA +LLRR GRR M REPSV VRE AAE LEERQ+ WAYSRP++ LD+LWNL F
Sbjct: 39 PSLRGAA-QLLRRG-GRRAM-REPSVLVREAAAEHLEERQADWAYSRPVVALDLLWNLAF 95
Query: 96 VIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRR---RRGEGVVFGDSV 152
+ VA VL +S +E +PLR + GYALQC+ H+ CV++E++ R R G G D
Sbjct: 96 ITVAAVVLVLSRDEDSPMPLRTWVAGYALQCVIHMVCVAIEYRMRHGQRGGAGAAPADEE 155
Query: 153 SGSSSTTVTGDEEERF---HGE--NDSSVAKNLESANTFLSFLWWIVGFYWITASGETLI 207
GS ++ + DE++R HG + +S+AK+LESANT SF+WWI+GFYWI+A GE +I
Sbjct: 156 RGSDGSSSSSDEDDRELDRHGRRTDYASIAKHLESANTMFSFIWWIIGFYWISAGGEEVI 215
Query: 208 SCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTER 259
+PQLYWLC+ FLAFDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA++++
Sbjct: 216 RDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVSDQ 267
>gi|414884508|tpg|DAA60522.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 359
Score = 216 bits (551), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 131/223 (58%), Positives = 163/223 (73%), Gaps = 20/223 (8%)
Query: 38 LRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVI 97
LRGAA R +RR RRLM REPSV VRETAAE LEERQ+ WAYS+P++VLD+LWNL FV
Sbjct: 44 LRGAA-RFIRRTGSRRLM-REPSVAVRETAAEHLEERQTDWAYSKPVVVLDMLWNLAFVA 101
Query: 98 VAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSS 157
VA AVL S+ E+P VPLR+ IVGY LQCL HV V++E++RRRR ++
Sbjct: 102 VAAAVLAASVGERPTVPLRVWIVGYVLQCLLHVLSVTVEYRRRRR------------NAD 149
Query: 158 TTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLC 217
GDE+ + S+ K+LESANT SF+WWIVGFYW++A G+ L +PQLYWL
Sbjct: 150 QEGAGDEDLKL------SIVKHLESANTMFSFIWWIVGFYWVSAGGKALSHDAPQLYWLS 203
Query: 218 VTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTERV 260
+ FLAFDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA+T++V
Sbjct: 204 IVFLAFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVTDQV 246
>gi|226503415|ref|NP_001151256.1| protein binding protein [Zea mays]
gi|195645358|gb|ACG42147.1| protein binding protein [Zea mays]
Length = 359
Score = 216 bits (551), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 131/223 (58%), Positives = 163/223 (73%), Gaps = 20/223 (8%)
Query: 38 LRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVI 97
LRGAA R +RR RRLM REPSV VRETAAE LEERQ+ WAYS+P++VLD+LWNL FV
Sbjct: 44 LRGAA-RFIRRTGSRRLM-REPSVAVRETAAEHLEERQTDWAYSKPVVVLDMLWNLAFVA 101
Query: 98 VAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSS 157
VA AVL S+ E+P VPLR+ IVGY LQCL HV V++E++RRRR ++
Sbjct: 102 VAAAVLAASVGERPTVPLRVWIVGYVLQCLLHVLSVTVEYRRRRR------------NAD 149
Query: 158 TTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLC 217
GDE+ + S+ K+LESANT SF+WWIVGFYW++A G+ L +PQLYWL
Sbjct: 150 QEGAGDEDLKL------SIVKHLESANTMFSFIWWIVGFYWVSAGGKALSHDAPQLYWLS 203
Query: 218 VTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTERV 260
+ FLAFDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA+T++V
Sbjct: 204 IVFLAFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVTDQV 246
>gi|194700864|gb|ACF84516.1| unknown [Zea mays]
gi|414884507|tpg|DAA60521.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 356
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 130/222 (58%), Positives = 162/222 (72%), Gaps = 20/222 (9%)
Query: 38 LRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVI 97
LRGAA R +RR RRLM REPSV VRETAAE LEERQ+ WAYS+P++VLD+LWNL FV
Sbjct: 44 LRGAA-RFIRRTGSRRLM-REPSVAVRETAAEHLEERQTDWAYSKPVVVLDMLWNLAFVA 101
Query: 98 VAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSS 157
VA AVL S+ E+P VPLR+ IVGY LQCL HV V++E++RRRR ++
Sbjct: 102 VAAAVLAASVGERPTVPLRVWIVGYVLQCLLHVLSVTVEYRRRRR------------NAD 149
Query: 158 TTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLC 217
GDE+ + S+ K+LESANT SF+WWIVGFYW++A G+ L +PQLYWL
Sbjct: 150 QEGAGDEDLKL------SIVKHLESANTMFSFIWWIVGFYWVSAGGKALSHDAPQLYWLS 203
Query: 218 VTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTER 259
+ FLAFDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA+T++
Sbjct: 204 IVFLAFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVTDQ 245
>gi|323388655|gb|ADX60132.1| WRKY transcription factor [Zea mays]
gi|414884506|tpg|DAA60520.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 357
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 130/222 (58%), Positives = 162/222 (72%), Gaps = 20/222 (9%)
Query: 38 LRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVI 97
LRGAA R +RR RRLM REPSV VRETAAE LEERQ+ WAYS+P++VLD+LWNL FV
Sbjct: 44 LRGAA-RFIRRTGSRRLM-REPSVAVRETAAEHLEERQTDWAYSKPVVVLDMLWNLAFVA 101
Query: 98 VAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSS 157
VA AVL S+ E+P VPLR+ IVGY LQCL HV V++E++RRRR ++
Sbjct: 102 VAAAVLAASVGERPTVPLRVWIVGYVLQCLLHVLSVTVEYRRRRR------------NAD 149
Query: 158 TTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLC 217
GDE+ + S+ K+LESANT SF+WWIVGFYW++A G+ L +PQLYWL
Sbjct: 150 QEGAGDEDLKL------SIVKHLESANTMFSFIWWIVGFYWVSAGGKALSHDAPQLYWLS 203
Query: 218 VTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTER 259
+ FLAFDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA+T++
Sbjct: 204 IVFLAFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVTDQ 245
>gi|307135837|gb|ADN33708.1| zinc finger protein [Cucumis melo subsp. melo]
Length = 356
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 112/218 (51%), Positives = 138/218 (63%), Gaps = 5/218 (2%)
Query: 40 GAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVA 99
G A LL RA+GRR S+ VRETAA +LEER+ W YS+P++ LD+ WNL FV V+
Sbjct: 37 GPLALLLGRATGRR----GTSMLVRETAARELEERRIDWGYSKPVVALDITWNLAFVFVS 92
Query: 100 FAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTT 159
VL S++EKP P+RL IV YA QCL HV V EFKRR
Sbjct: 93 LGVLIRSVHEKPNTPIRLWIVVYAAQCLVHVVLVWFEFKRRNARRARDMETQQQQQPDGY 152
Query: 160 VTGDEEERFHGEND-SSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCV 218
VT + +E G+ SSVAK ES NT +S +WW+ GFYW+ A G L+ +P LYWL V
Sbjct: 153 VTNESDEDDGGQRSLSSVAKRCESVNTLVSLIWWLFGFYWVVAGGNILMQNAPSLYWLAV 212
Query: 219 TFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYAL 256
FLAFDV F + CV +ACLIGIA+CCCLPCI+ ILYA+
Sbjct: 213 VFLAFDVFFAVFCVVLACLIGIALCCCLPCIIAILYAV 250
>gi|168003471|ref|XP_001754436.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694538|gb|EDQ80886.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 338
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 121/226 (53%), Positives = 157/226 (69%), Gaps = 8/226 (3%)
Query: 41 AAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAF 100
AAR LRRA RRLM REPS+ VRE+AAEQLE RQS WAYS+P++VLD++WNL FV V+
Sbjct: 6 GAARFLRRAGSRRLM-REPSMLVRESAAEQLEVRQSDWAYSKPVVVLDLIWNLAFVQVSL 64
Query: 101 AVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRR----GEGVVFGDSVSGSS 156
AVL +S E LR+ I+GYALQC+ H+ CV E+ RR++ V + + +
Sbjct: 65 AVLVLSKKETNCNELRIWIIGYALQCVVHMLCVCCEYLRRQQQVNANPSSVSSSNSTYAP 124
Query: 157 STTVTGDEEERFHGE---NDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQL 213
D + F + N++S AK LESANT SF+WW+VGFYWITA G++L +P +
Sbjct: 125 INNGENDVDSGFDDDGLSNEASWAKRLESANTMFSFVWWVVGFYWITAGGQSLAVDAPYV 184
Query: 214 YWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTER 259
YWLCV FL FDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA+ ++
Sbjct: 185 YWLCVLFLTFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVADQ 230
>gi|449465805|ref|XP_004150618.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
gi|449523519|ref|XP_004168771.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
Length = 356
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 112/218 (51%), Positives = 138/218 (63%), Gaps = 5/218 (2%)
Query: 40 GAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVA 99
G A LL RA+GRR S+ VRETAA +LEER+ W YS+P++ LD+ WNL FV V+
Sbjct: 37 GPLALLLGRATGRR----GTSMLVRETAARELEERRIDWGYSKPVVALDITWNLAFVFVS 92
Query: 100 FAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTT 159
VL S++EKP P+RL IV YA QCL HV V EFKRR
Sbjct: 93 LGVLIHSVHEKPNTPIRLWIVVYAAQCLVHVVLVWFEFKRRNARRARDMETQQQQEPDGY 152
Query: 160 VTGDEEERFHGEND-SSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCV 218
VT + +E G+ SSVAK ES NT +S +WW+ GFYW+ A G L+ +P LYWL V
Sbjct: 153 VTNESDEDDGGQRSFSSVAKRCESVNTMVSLIWWLFGFYWVVAGGNILMQNAPSLYWLAV 212
Query: 219 TFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYAL 256
FLAFDV F + CV +ACLIGIA+CCCLPCI+ ILYA+
Sbjct: 213 VFLAFDVFFAVFCVVLACLIGIALCCCLPCIIAILYAV 250
>gi|242043882|ref|XP_002459812.1| hypothetical protein SORBIDRAFT_02g011130 [Sorghum bicolor]
gi|241923189|gb|EER96333.1| hypothetical protein SORBIDRAFT_02g011130 [Sorghum bicolor]
Length = 357
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 129/222 (58%), Positives = 158/222 (71%), Gaps = 20/222 (9%)
Query: 38 LRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVI 97
LRGAA R +RR RRLM REPSV VRETAAE LEERQ+ WAYS+P++VLD+LWNL FV
Sbjct: 44 LRGAA-RFIRRTGSRRLM-REPSVAVRETAAEHLEERQTDWAYSKPVVVLDMLWNLAFVA 101
Query: 98 VAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSS 157
VA AVL S E P VPLR+ I GY LQCL H+ CV++E++RR R +
Sbjct: 102 VAAAVLAASTGESPAVPLRVWIAGYVLQCLLHILCVTVEYRRRSR------------DAD 149
Query: 158 TTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLC 217
GDE+ + SV K+LESANT SF+WWIVGFYW++A G+ L +PQLYWL
Sbjct: 150 QEGAGDEDFKL------SVVKHLESANTMFSFIWWIVGFYWVSAGGQALSHDAPQLYWLS 203
Query: 218 VTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTER 259
+ FLAFDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA+T++
Sbjct: 204 IVFLAFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVTDQ 245
>gi|21536719|gb|AAM61051.1| putative RING zinc finger protein [Arabidopsis thaliana]
Length = 343
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 113/234 (48%), Positives = 150/234 (64%), Gaps = 14/234 (5%)
Query: 24 LIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRP 83
LIRSR+ R P + A LL RASGRR S+ VRETAA++LEER++ W YS+P
Sbjct: 16 LIRSRQSSPRRQPVI----AVLLNRASGRR----GASMVVRETAAQELEERRADWGYSKP 67
Query: 84 IIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRG 143
++ LD+LWN FV+VA +L V EKP VP+R+ I GYA+QCL HV V LEF++R
Sbjct: 68 VVALDMLWNTAFVLVAIVMLLVFKEEKPNVPIRIWICGYAIQCLVHVVLVWLEFRKRNAR 127
Query: 144 EGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASG 203
++ ++ + D +ERF K ES NT +SF+WWIVGFYW+ + G
Sbjct: 128 SRPGDLEAAQATNQDSEDEDNDERFLS------TKTCESMNTIISFVWWIVGFYWLVSGG 181
Query: 204 ETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALT 257
+ L+ + LYWL FLAFDV F + CV +ACLIGIA+CCCLPCI+ +LYA+
Sbjct: 182 DILLQNATHLYWLTFVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIALLYAVA 235
>gi|356497216|ref|XP_003517458.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Glycine max]
Length = 385
Score = 213 bits (543), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 136/273 (49%), Positives = 177/273 (64%), Gaps = 30/273 (10%)
Query: 8 DAAETSPLLAHS--LPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRE 65
D +++PLLA+S D L R AAR LRRASGRR+M REPS+ VRE
Sbjct: 10 DIVDSTPLLANSGGSSDELTSGRGF---SRRQRLRQAARFLRRASGRRMM-REPSMLVRE 65
Query: 66 TAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQ 125
AAEQLEERQS WAYS+P++VLD++WN FV+VA AVL +S +E P +PLRL IVGYA+Q
Sbjct: 66 AAAEQLEERQSDWAYSKPVVVLDIVWNFAFVVVAGAVLVLSASEAPGMPLRLWIVGYAMQ 125
Query: 126 CLFHVFCVSLEFK-------------RRRRGEGVVFG------DSVSGSSSTTVTGDEEE 166
C+ H+ CV +E++ + R G S SGS+ G ++
Sbjct: 126 CVLHMVCVCVEYRRRRRQQRAAASSVQDRVGSSSGNLSVSSREGSASGSAQYVSLGQLDD 185
Query: 167 RFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVV 226
+SVAK+LESANT SF+WWI+GFYW++A G+ L SPQLYWLC+ FL FDV
Sbjct: 186 E-----GTSVAKHLESANTMFSFVWWIIGFYWVSAGGQALAQDSPQLYWLCIIFLGFDVF 240
Query: 227 FVMICVGVACLIGIAVCCCLPCILGILYALTER 259
FV+ CV +AC+IGIAVCCCLPCI+ +LYA+ ++
Sbjct: 241 FVVFCVALACIIGIAVCCCLPCIIALLYAVADQ 273
>gi|297838553|ref|XP_002887158.1| hypothetical protein ARALYDRAFT_475916 [Arabidopsis lyrata subsp.
lyrata]
gi|297332999|gb|EFH63417.1| hypothetical protein ARALYDRAFT_475916 [Arabidopsis lyrata subsp.
lyrata]
Length = 344
Score = 213 bits (543), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 115/236 (48%), Positives = 151/236 (63%), Gaps = 17/236 (7%)
Query: 24 LIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRP 83
L+RSR+ R PP + A LL RASGRR S+ VRETAA++LEER++ W YS+P
Sbjct: 16 LLRSRQSSPRRPPVI----AVLLGRASGRR----GASMVVRETAAQELEERRADWGYSKP 67
Query: 84 IIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRG 143
++ LD+LWN FV+VA +L V EKP VP+R+ I GYA+QCL HV V LEF R+R
Sbjct: 68 VVALDMLWNTAFVVVAIVMLLVFKEEKPNVPIRVWICGYAIQCLVHVVLVWLEF--RKRN 125
Query: 144 EGVVFGDSVSGSSSTTVTGDEEERFHGENDSSV--AKNLESANTFLSFLWWIVGFYWITA 201
GD + S ++E+ ND + K ES NT +SF+WWI GFYW+ +
Sbjct: 126 ARTRTGDLEAAQGSGNHDSEDED-----NDERILSTKTCESMNTIISFIWWIAGFYWLVS 180
Query: 202 SGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALT 257
G+ L+ + LYWL FLAFDV F + CV +ACLIGIA+CCCLPCI+ +LYA+
Sbjct: 181 GGDILLQNATHLYWLTFIFLAFDVFFAIFCVVLACLIGIALCCCLPCIIALLYAVA 236
>gi|15220639|ref|NP_176974.1| C3HC4-type RING finger domain-containing protein [Arabidopsis
thaliana]
gi|12324089|gb|AAG52017.1|AC012563_27 putative RING zinc finger protein; 27623-28978 [Arabidopsis
thaliana]
gi|90093276|gb|ABD85151.1| At1g68070 [Arabidopsis thaliana]
gi|332196622|gb|AEE34743.1| C3HC4-type RING finger domain-containing protein [Arabidopsis
thaliana]
Length = 343
Score = 213 bits (543), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 112/234 (47%), Positives = 150/234 (64%), Gaps = 14/234 (5%)
Query: 24 LIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRP 83
L+RSR+ R P + A LL RASGRR S+ VRETAA++LEER++ W YS+P
Sbjct: 16 LLRSRQSSPRRQPVI----AVLLNRASGRR----GASMVVRETAAQELEERRADWGYSKP 67
Query: 84 IIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRG 143
++ LD+LWN FV+VA +L V EKP VP+R+ I GYA+QCL HV V LEF++R
Sbjct: 68 VVALDMLWNTAFVLVAIVMLLVFKEEKPNVPIRIWICGYAIQCLVHVVLVWLEFRKRNAR 127
Query: 144 EGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASG 203
++ ++ + D +ERF K ES NT +SF+WWIVGFYW+ + G
Sbjct: 128 SRPGDLEAAQATNQDSEDEDNDERFLS------TKTCESMNTIISFVWWIVGFYWLVSGG 181
Query: 204 ETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALT 257
+ L+ + LYWL FLAFDV F + CV +ACLIGIA+CCCLPCI+ +LYA+
Sbjct: 182 DILLQNATHLYWLTFVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIALLYAVA 235
>gi|359472593|ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261060 [Vitis vinifera]
Length = 2299
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 112/220 (50%), Positives = 143/220 (65%), Gaps = 10/220 (4%)
Query: 43 ARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAV 102
A L+ RA+GRR PS+ VRETAA +LEER++ W YS+P++ LD++WN+ FVIV+ +
Sbjct: 1976 ALLMGRATGRR----GPSMLVRETAARELEERRADWGYSKPVVALDMMWNMSFVIVSIVM 2031
Query: 103 LGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVTG 162
L + E+P P+RL I GYALQC HV V LE++RR R S +
Sbjct: 2032 LICTARERPNTPIRLWICGYALQCGVHVVLVWLEYRRRNRRRVRDEEQQQQPQHSDSDVN 2091
Query: 163 DEEER------FHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWL 216
D E+ G N SSV K ES NT SFLWWIVGFYW+ + GE L+ +P+LYWL
Sbjct: 2092 DSEDEDGNSSASGGFNQSSVTKRCESVNTMASFLWWIVGFYWVVSGGEALLQNAPRLYWL 2151
Query: 217 CVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYAL 256
V FLAFDV F + CV +ACLIGIA+CCCLPCI+ ILYA+
Sbjct: 2152 AVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAV 2191
>gi|224101895|ref|XP_002312464.1| predicted protein [Populus trichocarpa]
gi|222852284|gb|EEE89831.1| predicted protein [Populus trichocarpa]
Length = 351
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 110/236 (46%), Positives = 149/236 (63%), Gaps = 7/236 (2%)
Query: 24 LIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRP 83
L+R R+ P + + LL RA+GRR PS+ VRETAA +L+ER++ W YS+P
Sbjct: 11 LLRPRQDPPTSPTSRQTTLSALLGRATGRR----GPSMLVRETAARELDERRADWGYSKP 66
Query: 84 IIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRG 143
++ LD++WN FV+V+ +L V++ E+P P+R+ I GYALQCL HV V LE++RR
Sbjct: 67 VVSLDMMWNAAFVVVSVTMLLVTVKERPNTPIRIWICGYALQCLVHVVLVWLEYRRRNTR 126
Query: 144 EGVVFGDSVSGSSSTTVTGDEEERFHGE---NDSSVAKNLESANTFLSFLWWIVGFYWIT 200
+ V +EE SSV K ES NT +SFLWW+VGFYW+
Sbjct: 127 RERDIESQQQSTEEENVPESDEEDDRASFISPRSSVTKRCESVNTMVSFLWWMVGFYWVV 186
Query: 201 ASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYAL 256
+ G+ L+ +P LYWL V FLAFDV F + CV +ACLIGIA+CCCLPCI+ ILYA+
Sbjct: 187 SGGDVLLQNAPHLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAV 242
>gi|413919226|gb|AFW59158.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 291
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 119/224 (53%), Positives = 158/224 (70%), Gaps = 18/224 (8%)
Query: 56 LREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPL 115
+REPSV VRE AAE LEERQ+ WAYSRP++ LD+LWNL F+ VA VL +S +E +PL
Sbjct: 56 MREPSVLVREAAAEHLEERQADWAYSRPVVALDLLWNLAFITVAAVVLVLSRDEDSPMPL 115
Query: 116 RLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTV------------TGD 163
R + GYALQC+ H+ CV++E+ R R G+ G +V+G++ V D
Sbjct: 116 RTWVAGYALQCVVHMICVAIEY-RMRHGQR---GSAVAGAAPADVERGSDASSSSSDEDD 171
Query: 164 EEERFHGE--NDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFL 221
E HG + +S+AK+LESANT SF+WWI+GFYWI+A GE +I +PQLYWLC+ FL
Sbjct: 172 RELDLHGRRTDYASIAKHLESANTMFSFIWWIIGFYWISAGGEEVIQDAPQLYWLCIVFL 231
Query: 222 AFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTERVMYGRS 265
AFDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA++++V +S
Sbjct: 232 AFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVSDQVWLFKS 275
>gi|255570075|ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
gi|223534732|gb|EEF36424.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
Length = 963
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 114/241 (47%), Positives = 145/241 (60%), Gaps = 22/241 (9%)
Query: 33 RPPPPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWN 92
R P + A LL R +GRR PS+ VRETAA +LEER++ W YS+P++ LD++WN
Sbjct: 619 RQEAPRAASLAMLLGRVTGRR----GPSMLVRETAALELEERRADWGYSKPVVALDMVWN 674
Query: 93 LVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSV 152
FV+V+ +L +S+ EKP P+R+ I GYALQCL HV V +E++RR
Sbjct: 675 TAFVVVSITMLILSVKEKPNTPIRIWICGYALQCLVHVVLVWIEYRRRNSRRVRDEERQQ 734
Query: 153 SGSSSTTVTGDEEERFHGEN-----------------DSSVAKNLESANTFLSFLWWIVG 195
V G EE GEN SSV K ES NT SFLWWIVG
Sbjct: 735 QQQQQAEVEGQHEEN-EGENVDSEDEDGVDRASVTSNRSSVIKRCESVNTMASFLWWIVG 793
Query: 196 FYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYA 255
FYW+ + G+ L+ +P LYWL V FLAFDV F + CV +ACLIGIA+CCCLPCI+ ILYA
Sbjct: 794 FYWVVSGGDELLQNAPHLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYA 853
Query: 256 L 256
+
Sbjct: 854 V 854
>gi|147769549|emb|CAN61404.1| hypothetical protein VITISV_014258 [Vitis vinifera]
Length = 361
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 112/220 (50%), Positives = 143/220 (65%), Gaps = 10/220 (4%)
Query: 43 ARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAV 102
A L+ RA+GRR PS+ VRETAA +LEER++ W YS+P++ LD++WN+ FVIV+ +
Sbjct: 32 ALLMGRATGRR----GPSMLVRETAARELEERRADWGYSKPVVALDMMWNMSFVIVSIVM 87
Query: 103 LGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVTG 162
L + E+P P+RL I GYALQC HV V LE++RR R S +
Sbjct: 88 LICTARERPNTPIRLWICGYALQCGVHVVLVWLEYRRRSRRRVRDEEQQQQPQHSDSDVN 147
Query: 163 DEEER------FHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWL 216
D E+ G N SSV K ES NT SFLWWIVGFYW+ + GE L+ +P+LYWL
Sbjct: 148 DSEDEDGNSSASGGFNQSSVTKRCESVNTMASFLWWIVGFYWVVSGGEALLQNAPRLYWL 207
Query: 217 CVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYAL 256
V FLAFDV F + CV +ACLIGIA+CCCLPCI+ ILYA+
Sbjct: 208 AVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAV 247
>gi|226501106|ref|NP_001150553.1| LOC100284185 [Zea mays]
gi|195640148|gb|ACG39542.1| protein binding protein [Zea mays]
Length = 375
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 117/218 (53%), Positives = 155/218 (71%), Gaps = 18/218 (8%)
Query: 56 LREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPL 115
+REPSV VRE AAE LEERQ+ WAYSRP++ LD+LWNL F+ VA VL +S +E +PL
Sbjct: 56 MREPSVLVREAAAEHLEERQADWAYSRPVVALDLLWNLAFITVAAVVLVLSRDEDSPMPL 115
Query: 116 RLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTV------------TGD 163
R + GYALQC+ H+ CV++E+ R R G+ G +V+G++ V D
Sbjct: 116 RTWVAGYALQCVVHMICVAIEY-RMRHGQR---GSAVAGAAPADVERGSDASSSSSDEDD 171
Query: 164 EEERFHGE--NDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFL 221
E HG + +S+AK+LESANT SF+WWI+GFYWI+A GE +I +PQLYWLC+ FL
Sbjct: 172 RELDLHGRRTDYASIAKHLESANTMFSFIWWIIGFYWISAGGEEVIQDAPQLYWLCIVFL 231
Query: 222 AFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTER 259
AFDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA++++
Sbjct: 232 AFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVSDQ 269
>gi|219884153|gb|ACL52451.1| unknown [Zea mays]
gi|413919225|gb|AFW59157.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 382
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 117/218 (53%), Positives = 155/218 (71%), Gaps = 18/218 (8%)
Query: 56 LREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPL 115
+REPSV VRE AAE LEERQ+ WAYSRP++ LD+LWNL F+ VA VL +S +E +PL
Sbjct: 56 MREPSVLVREAAAEHLEERQADWAYSRPVVALDLLWNLAFITVAAVVLVLSRDEDSPMPL 115
Query: 116 RLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTV------------TGD 163
R + GYALQC+ H+ CV++E+ R R G+ G +V+G++ V D
Sbjct: 116 RTWVAGYALQCVVHMICVAIEY-RMRHGQR---GSAVAGAAPADVERGSDASSSSSDEDD 171
Query: 164 EEERFHGE--NDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFL 221
E HG + +S+AK+LESANT SF+WWI+GFYWI+A GE +I +PQLYWLC+ FL
Sbjct: 172 RELDLHGRRTDYASIAKHLESANTMFSFIWWIIGFYWISAGGEEVIQDAPQLYWLCIVFL 231
Query: 222 AFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTER 259
AFDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA++++
Sbjct: 232 AFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVSDQ 269
>gi|21554228|gb|AAM63303.1| unknown [Arabidopsis thaliana]
Length = 381
Score = 206 bits (524), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 127/235 (54%), Positives = 167/235 (71%), Gaps = 18/235 (7%)
Query: 42 AARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFA 101
AARLLR AS R+M+REPS+ VRE AAEQLEERQS WAYS+P++VLD +WNL FV+VA A
Sbjct: 32 AARLLRHASSGRMMMREPSMLVREAAAEQLEERQSDWAYSKPVVVLDFVWNLAFVVVATA 91
Query: 102 VLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVT 161
VL +S +E P +PLR+ I+GY LQC+ H+ CV +E++RR S SSS++ +
Sbjct: 92 VLVLSSDENPNMPLRVWIIGYGLQCMMHMVCVCVEYRRRNSRRRRDLSPRSSSSSSSSSS 151
Query: 162 G-DEEE----------------RFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGE 204
DEEE + EN+S AK+LESANT +SF+WW++GFYW+++ G+
Sbjct: 152 SMDEEEGLGLSRNSDERYLELGQLENENNS-FAKHLESANTMISFIWWVIGFYWVSSGGQ 210
Query: 205 TLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTER 259
L SPQLYWLC+ FL FDV FV+ CV +AC+IGIAVCCCLPCI+ +LYA+ E+
Sbjct: 211 ELAQGSPQLYWLCIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAVAEQ 265
>gi|16604388|gb|AAL24200.1| At1g63170/F16M19_7 [Arabidopsis thaliana]
Length = 381
Score = 206 bits (524), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 127/235 (54%), Positives = 167/235 (71%), Gaps = 18/235 (7%)
Query: 42 AARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFA 101
AARLLR AS R+M+REPS+ VRE AAEQLEERQS WAYS+P++VLD +WNL FV+VA A
Sbjct: 32 AARLLRHASSGRMMMREPSMLVREAAAEQLEERQSDWAYSKPVVVLDFVWNLAFVVVATA 91
Query: 102 VLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVT 161
VL +S +E P +PLR+ I+GY LQC+ H+ CV +E++RR S SSS++ +
Sbjct: 92 VLVLSSDENPNMPLRVWIIGYGLQCMMHMVCVCVEYRRRNSRRRRDLSPRSSSSSSSSSS 151
Query: 162 G-DEEE----------------RFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGE 204
DEEE + EN+S AK+LESANT +SF+WW++GFYW+++ G+
Sbjct: 152 SMDEEEGLGLSRNSDERYLELGQLENENNS-FAKHLESANTMISFIWWVIGFYWVSSGGQ 210
Query: 205 TLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTER 259
L SPQLYWLC+ FL FDV FV+ CV +AC+IGIAVCCCLPCI+ +LYA+ E+
Sbjct: 211 ELAQGSPQLYWLCIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAVAEQ 265
>gi|18407748|ref|NP_564810.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
gi|122064956|sp|Q8LDB8.2|RING2_ARATH RecName: Full=E3 ubiquitin-protein ligase At1g63170; AltName:
Full=RING finger protein At1g63170
gi|12323245|gb|AAG51597.1|AC010795_1 hypothetical protein; 76801-78300 [Arabidopsis thaliana]
gi|332195943|gb|AEE34064.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
Length = 381
Score = 206 bits (524), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 127/235 (54%), Positives = 167/235 (71%), Gaps = 18/235 (7%)
Query: 42 AARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFA 101
AARLLR AS R+M+REPS+ VRE AAEQLEERQS WAYS+P++VLD +WNL FV+VA A
Sbjct: 32 AARLLRHASSGRMMMREPSMLVREAAAEQLEERQSDWAYSKPVVVLDFVWNLAFVVVATA 91
Query: 102 VLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVT 161
VL +S +E P +PLR+ I+GY LQC+ H+ CV +E++RR S SSS++ +
Sbjct: 92 VLVLSSDENPNMPLRVWIIGYGLQCMMHMVCVCVEYRRRNSRRRRDLSPRSSSSSSSSSS 151
Query: 162 G-DEEE----------------RFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGE 204
DEEE + EN+S AK+LESANT +SF+WW++GFYW+++ G+
Sbjct: 152 SMDEEEGLGLSRNSDERYLELGQLENENNS-FAKHLESANTMISFIWWVIGFYWVSSGGQ 210
Query: 205 TLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTER 259
L SPQLYWLC+ FL FDV FV+ CV +AC+IGIAVCCCLPCI+ +LYA+ E+
Sbjct: 211 ELAQGSPQLYWLCIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAVAEQ 265
>gi|79342958|ref|NP_172736.2| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
gi|75335230|sp|Q9LN71.1|RING1_ARATH RecName: Full=E3 ubiquitin-protein ligase At1g12760; AltName:
Full=RING finger protein At1g12760
gi|9502381|gb|AAF88088.1|AC025417_16 T12C24.29 [Arabidopsis thaliana]
gi|22531064|gb|AAM97036.1| unknown protein [Arabidopsis thaliana]
gi|23198142|gb|AAN15598.1| unknown protein [Arabidopsis thaliana]
gi|67037431|gb|AAY63561.1| RING domain protein [Arabidopsis thaliana]
gi|332190803|gb|AEE28924.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
Length = 408
Score = 203 bits (517), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 125/252 (49%), Positives = 163/252 (64%), Gaps = 24/252 (9%)
Query: 28 RRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVL 87
RR +RR LR AAR L RAS R+M REPS+ VRE AAEQLEERQS WAYS+P++VL
Sbjct: 48 RRSVRRQG--LR-EAARFLSRASSGRVM-REPSMLVREAAAEQLEERQSDWAYSKPVVVL 103
Query: 88 DVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVV 147
D++WNL FV VA A+L +S E P +PLR+ ++GYALQC+ H+ CV +E++RR R
Sbjct: 104 DIVWNLAFVSVATAILVMSRKEHPIMPLRVWLLGYALQCVLHMVCVCVEYRRRNRRRTNR 163
Query: 148 --------------------FGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFL 187
+ GS + D SSVAK+LESANT
Sbjct: 164 TTTTTPPRSRSSSSSSSSSSLEEEALGSRRNSGVQDLSLGHLDTESSSVAKHLESANTMF 223
Query: 188 SFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLP 247
SF+WWI+GFYW++A G+ L SP++YWL + FL FDV FV+ CV +AC+IGIAVCCCLP
Sbjct: 224 SFIWWIIGFYWVSAGGQELAQESPRIYWLSIVFLGFDVFFVVFCVALACVIGIAVCCCLP 283
Query: 248 CILGILYALTER 259
CI+ +LYA+ ++
Sbjct: 284 CIIAVLYAVADQ 295
>gi|38344371|emb|CAE02249.2| OSJNBb0032E06.5 [Oryza sativa Japonica Group]
gi|116310006|emb|CAH67032.1| OSIGBa0139P06.5 [Oryza sativa Indica Group]
Length = 324
Score = 203 bits (517), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 115/211 (54%), Positives = 150/211 (71%), Gaps = 7/211 (3%)
Query: 56 LREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPL 115
+REPSV VRE AAE LEERQ+ WAYSRP++ LD+LWNL F+ VA VL +S E +PL
Sbjct: 1 MREPSVLVREAAAEHLEERQADWAYSRPVVALDLLWNLAFITVAAVVLVLSRGEDSPMPL 60
Query: 116 RLRIVGYALQCLFHVFCVSLEFKRRR--RGEGVVFGDS-----VSGSSSTTVTGDEEERF 168
R + GYALQC+ H+ CV++E++ RR R D S SSS +++ R
Sbjct: 61 RTWVAGYALQCVVHMVCVAIEYRMRRGQRDRAPASADEERGSDGSSSSSDDDVTEDDRRG 120
Query: 169 HGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFV 228
+ S+AK+LESANT SF+WWI+GFYWI+A GE +I +PQLYWLC+ FLAFDV FV
Sbjct: 121 SCTDCVSIAKHLESANTMFSFIWWIIGFYWISAGGEDVIRDAPQLYWLCIVFLAFDVFFV 180
Query: 229 MICVGVACLIGIAVCCCLPCILGILYALTER 259
+ CV +AC+IGIAVCCCLPCI+ ILYA++++
Sbjct: 181 VFCVALACIIGIAVCCCLPCIIAILYAVSDQ 211
>gi|302758464|ref|XP_002962655.1| hypothetical protein SELMODRAFT_78385 [Selaginella moellendorffii]
gi|300169516|gb|EFJ36118.1| hypothetical protein SELMODRAFT_78385 [Selaginella moellendorffii]
Length = 366
Score = 203 bits (517), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 129/224 (57%), Positives = 160/224 (71%), Gaps = 13/224 (5%)
Query: 41 AAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAF 100
AAR LR+A+GRR M REPS+ VR+TAAEQLEERQS WAYSRP++VLD++WNL FV+VA
Sbjct: 35 GAARYLRQATGRRPM-REPSMLVRQTAAEQLEERQSDWAYSRPVVVLDLMWNLAFVVVAV 93
Query: 101 AVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRR-----RRGEGVVFGDSVSGS 155
AVL S E+PE PLR+ IVGYA+QCL H+ CV E++RR R G G S
Sbjct: 94 AVLVNSKEERPETPLRVWIVGYAVQCLVHMVCVCSEYRRRRRRILRGGSGPAENTVAHLS 153
Query: 156 SSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYW 215
+ + D E S++K LESANT SF+WW++GFYWITA G+ L SP+LYW
Sbjct: 154 AGSESEIDMEAH-------SLSKRLESANTMFSFVWWVIGFYWITAGGQALTQHSPRLYW 206
Query: 216 LCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTER 259
L V FLAFDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA+ ++
Sbjct: 207 LSVVFLAFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVADQ 250
>gi|194689606|gb|ACF78887.1| unknown [Zea mays]
gi|413923427|gb|AFW63359.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 375
Score = 203 bits (516), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 114/211 (54%), Positives = 155/211 (73%), Gaps = 7/211 (3%)
Query: 56 LREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPL 115
+REPS+ VRE AAEQLEERQ+ WAYSRP++ LD LWNL F++V+ VL +S +E P +PL
Sbjct: 52 MREPSLLVREAAAEQLEERQADWAYSRPVVALDFLWNLAFILVSAVVLVLSHHESPSMPL 111
Query: 116 RLRIVGYALQCLFHVFCVSLEFKRR--RRGEGVVFGDSVSGSSSTTVTGDEEERFHGEND 173
R I GY QC+ H+ CV++E++ R + G + D SGS S + + +++R HG +
Sbjct: 112 RFWIAGYTAQCVVHMVCVAIEYRLRYGQLGGSPIPVDEESGSGSASSSSSDDDREHGSHS 171
Query: 174 SS-----VAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFV 228
S +AK+LESANT SF+WWI+GFYW++A GE L +PQLYWLC+ FLAFDV FV
Sbjct: 172 RSGDCLSIAKHLESANTMFSFVWWIIGFYWVSAGGEVLTRDAPQLYWLCIVFLAFDVFFV 231
Query: 229 MICVGVACLIGIAVCCCLPCILGILYALTER 259
+ CV +AC+IGIAVCCCLPCI+ ILYA++++
Sbjct: 232 VFCVALACIIGIAVCCCLPCIIAILYAVSDQ 262
>gi|302797352|ref|XP_002980437.1| hypothetical protein SELMODRAFT_112292 [Selaginella moellendorffii]
gi|300152053|gb|EFJ18697.1| hypothetical protein SELMODRAFT_112292 [Selaginella moellendorffii]
Length = 366
Score = 203 bits (516), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 129/224 (57%), Positives = 162/224 (72%), Gaps = 13/224 (5%)
Query: 41 AAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAF 100
AAR LR+A+GRR M REPS+ VR+TAAEQLEERQS WAYSRP++VLD++WNL FV+VA
Sbjct: 35 GAARYLRQATGRRPM-REPSMLVRQTAAEQLEERQSDWAYSRPVVVLDLMWNLAFVVVAV 93
Query: 101 AVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRR-----RRGEGVVFGDSVSGS 155
AVL S E+PE PLR+ IVGYA+QCL H+ CV E++RR R G G ++ G
Sbjct: 94 AVLVNSKEERPETPLRVWIVGYAVQCLVHMVCVCSEYRRRRRRILRGGSGPA--ENTVGH 151
Query: 156 SSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYW 215
S + + H S++K LESANT SF+WW++GFYWITA G+ L SP+LYW
Sbjct: 152 LSAGSESEIDMEAH-----SLSKRLESANTMFSFVWWVIGFYWITAGGQALTQHSPRLYW 206
Query: 216 LCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTER 259
L V FLAFDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA+ ++
Sbjct: 207 LSVVFLAFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVADQ 250
>gi|194707262|gb|ACF87715.1| unknown [Zea mays]
gi|194708318|gb|ACF88243.1| unknown [Zea mays]
Length = 324
Score = 202 bits (515), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 114/211 (54%), Positives = 155/211 (73%), Gaps = 7/211 (3%)
Query: 56 LREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPL 115
+REPS+ VRE AAEQLEERQ+ WAYSRP++ LD LWNL F++V+ VL +S +E P +PL
Sbjct: 1 MREPSLLVREAAAEQLEERQADWAYSRPVVALDFLWNLAFILVSAVVLVLSHHESPSMPL 60
Query: 116 RLRIVGYALQCLFHVFCVSLEFKRR--RRGEGVVFGDSVSGSSSTTVTGDEEERFHGEND 173
R I GY QC+ H+ CV++E++ R + G + D SGS S + + +++R HG +
Sbjct: 61 RFWIAGYTAQCVVHMVCVAIEYRLRYGQLGGSPIPVDEESGSGSASSSSSDDDREHGSHS 120
Query: 174 SS-----VAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFV 228
S +AK+LESANT SF+WWI+GFYW++A GE L +PQLYWLC+ FLAFDV FV
Sbjct: 121 RSGDCLSIAKHLESANTMFSFVWWIIGFYWVSAGGEVLTRDAPQLYWLCIVFLAFDVFFV 180
Query: 229 MICVGVACLIGIAVCCCLPCILGILYALTER 259
+ CV +AC+IGIAVCCCLPCI+ ILYA++++
Sbjct: 181 VFCVALACIIGIAVCCCLPCIIAILYAVSDQ 211
>gi|115471969|ref|NP_001059583.1| Os07g0463400 [Oryza sativa Japonica Group]
gi|33146524|dbj|BAC79657.1| putative RES protein [Oryza sativa Japonica Group]
gi|113611119|dbj|BAF21497.1| Os07g0463400 [Oryza sativa Japonica Group]
gi|125600141|gb|EAZ39717.1| hypothetical protein OsJ_24155 [Oryza sativa Japonica Group]
gi|215695316|dbj|BAG90507.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 361
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 126/218 (57%), Positives = 155/218 (71%), Gaps = 13/218 (5%)
Query: 42 AARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFA 101
AAR L R RRLM REPSV VRETAAE LEERQ+ WAYS+P++VLDVLWNL FV VA A
Sbjct: 46 AARFLGRTGSRRLM-REPSVAVRETAAEHLEERQTDWAYSKPVVVLDVLWNLAFVAVAAA 104
Query: 102 VLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVT 161
VL S+ E P VPLR+ + GY LQCLFHV CV++E++RRR +
Sbjct: 105 VLAASLPESPSVPLRVWLAGYVLQCLFHVLCVTVEYRRRRE------------ARGGGFG 152
Query: 162 GDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFL 221
D+ G+ S+ K+LESANT SF+WWI+GFYWI+A G+ L +PQLYWL + FL
Sbjct: 153 ADQGAAADGDFKLSIVKHLESANTMFSFIWWIIGFYWISAGGQALSHDAPQLYWLSIVFL 212
Query: 222 AFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTER 259
AFDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA+T++
Sbjct: 213 AFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVTDQ 250
>gi|359474241|ref|XP_003631422.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
[Vitis vinifera]
Length = 383
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 126/219 (57%), Positives = 156/219 (71%), Gaps = 25/219 (11%)
Query: 58 EPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRL 117
EPS+ VRETAAEQLEERQS WAYS+P++VLD++WN FV+VA AVL +S E P +PLR
Sbjct: 61 EPSMLVRETAAEQLEERQSDWAYSKPVVVLDMIWNFAFVVVAAAVLVLSRRESPSMPLRF 120
Query: 118 RIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDS-------------VSGSSSTTVT--- 161
IVGYALQC+ H+ CVS+E++RRRR GV FG G SS VT
Sbjct: 121 WIVGYALQCILHIVCVSVEYRRRRRRAGV-FGSEDDGIGSGGSYSSSPQGDSSQYVTLAS 179
Query: 162 -GDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTF 220
GDE + +SVAK+LESANT SF+WWI+GFYW++A G+ L SPQLYWLC+ F
Sbjct: 180 LGDE-------SSTSVAKHLESANTMFSFIWWIIGFYWVSAGGQALARDSPQLYWLCIIF 232
Query: 221 LAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTER 259
L FDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA+ ++
Sbjct: 233 LGFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVADQ 271
>gi|359474243|ref|XP_003631423.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 3
[Vitis vinifera]
Length = 392
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 125/221 (56%), Positives = 155/221 (70%), Gaps = 20/221 (9%)
Query: 58 EPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRL 117
EPS+ VRETAAEQLEERQS WAYS+P++VLD++WN FV+VA AVL +S E P +PLR
Sbjct: 61 EPSMLVRETAAEQLEERQSDWAYSKPVVVLDMIWNFAFVVVAAAVLVLSRRESPSMPLRF 120
Query: 118 RIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDS-------------VSGSSSTTVTGDE 164
IVGYALQC+ H+ CVS+E++RRRR GV FG G SS VT
Sbjct: 121 WIVGYALQCILHIVCVSVEYRRRRRRAGV-FGSEDDGIGSGGSYSSSPQGDSSQYVTLAN 179
Query: 165 EERFHGEND------SSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCV 218
+ H + SSVAK+LESANT SF+WWI+GFYW++A G+ L SPQLYWLC+
Sbjct: 180 VDEHHSQTCQFLSLLSSVAKHLESANTMFSFIWWIIGFYWVSAGGQALARDSPQLYWLCI 239
Query: 219 TFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTER 259
FL FDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA+ ++
Sbjct: 240 IFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVADQ 280
>gi|302772434|ref|XP_002969635.1| hypothetical protein SELMODRAFT_66385 [Selaginella moellendorffii]
gi|300163111|gb|EFJ29723.1| hypothetical protein SELMODRAFT_66385 [Selaginella moellendorffii]
Length = 321
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 113/212 (53%), Positives = 152/212 (71%), Gaps = 9/212 (4%)
Query: 56 LREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPL 115
+RE S+ VRETA EQL+ERQS WAYSRP++VLD++WNL FV VA VL +S +E+P PL
Sbjct: 1 MRESSILVRETAVEQLDERQSDWAYSRPVVVLDLIWNLAFVTVALVVLVISQSEQPCTPL 60
Query: 116 RLRIVGYALQCLFHVFCVSLEFKRR----RRGEGVVFGDSVSGSSSTTVTGDEEERFHGE 171
R+ ++GYALQC+ H+ CV E++RR G G+ D + + ++ +E+ R
Sbjct: 61 RIWVLGYALQCVLHMSCVVSEYRRRRRRRSSGAGMELED-MEDNEIDHISNEEKHRLLTG 119
Query: 172 ND----SSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVF 227
+ S+AK LESANT SF+WW+VGFYWITA E L+ SP++YWLC+ FLAFDV F
Sbjct: 120 SSFFPFCSLAKRLESANTMFSFVWWVVGFYWITAGSEALVQSSPRVYWLCIVFLAFDVFF 179
Query: 228 VMICVGVACLIGIAVCCCLPCILGILYALTER 259
V+ CV +AC+IGIAVCCCLPCI+ ILYA+ ++
Sbjct: 180 VVFCVALACMIGIAVCCCLPCIIAILYAVVDQ 211
>gi|218199557|gb|EEC81984.1| hypothetical protein OsI_25906 [Oryza sativa Indica Group]
Length = 361
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 126/218 (57%), Positives = 155/218 (71%), Gaps = 13/218 (5%)
Query: 42 AARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFA 101
AAR L R RRLM REPSV VRETAAE LEERQ+ WAYS+P++VLDVLWNL FV VA A
Sbjct: 46 AARFLGRTGSRRLM-REPSVAVRETAAEHLEERQTDWAYSKPVVVLDVLWNLAFVAVAAA 104
Query: 102 VLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVT 161
VL S+ E P VPLR+ + GY LQCLFHV CV++E++RRR +
Sbjct: 105 VLAASLPESPSVPLRVWLSGYVLQCLFHVLCVTVEYRRRRE------------ARGGGFG 152
Query: 162 GDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFL 221
D+ G+ S+ K+LESANT SF+WWI+GFYWI+A G+ L +PQLYWL + FL
Sbjct: 153 ADQGAAADGDFKLSIVKHLESANTMFSFIWWIIGFYWISAGGQALSHDAPQLYWLSIVFL 212
Query: 222 AFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTER 259
AFDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA+T++
Sbjct: 213 AFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVTDQ 250
>gi|356499571|ref|XP_003518612.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
Length = 357
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 119/256 (46%), Positives = 158/256 (61%), Gaps = 15/256 (5%)
Query: 9 AAETSPLLAHSLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRETAA 68
+++T+P A L+RSR R P P A A LL RA GRR PS+ VRETAA
Sbjct: 2 SSQTAPTEAPEPYTPLLRSRTDAGRGPAP---ALALLLGRA-GRR----GPSMLVRETAA 53
Query: 69 EQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLF 128
+LEER++ W YS+P++ LD+ WN+ FV+V+ A+L + +E P P+R+ IVGYALQCL
Sbjct: 54 RELEERRADWGYSKPVVALDMSWNMAFVVVSAAMLACTTSEHPTTPIRVWIVGYALQCLV 113
Query: 129 HVFCVSLEFKRRRRGEGVVFGDSV-------SGSSSTTVTGDEEERFHGENDSSVAKNLE 181
HV V LE++RR R + + D + + S AK E
Sbjct: 114 HVLLVWLEYRRRSRRDSRSGSQRARDVESDAGSGDDDDYSDDGDGSSGNTSRSRFAKRCE 173
Query: 182 SANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIA 241
S NT +SFLWWIVGFYW+ + G+ L+ +P+LYWL V FLAFDV F + CV +ACLIGIA
Sbjct: 174 SLNTGVSFLWWIVGFYWVVSGGDILLQDAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIA 233
Query: 242 VCCCLPCILGILYALT 257
+CCCLPCI+ ILYA+
Sbjct: 234 LCCCLPCIIAILYAVA 249
>gi|359474239|ref|XP_003631421.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
[Vitis vinifera]
Length = 372
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 120/206 (58%), Positives = 150/206 (72%), Gaps = 10/206 (4%)
Query: 58 EPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRL 117
EPS+ VRETAAEQLEERQS WAYS+P++VLD++WN FV+VA AVL +S E P +PLR
Sbjct: 61 EPSMLVRETAAEQLEERQSDWAYSKPVVVLDMIWNFAFVVVAAAVLVLSRRESPSMPLRF 120
Query: 118 RIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVTGDEEERFHGENDSS-- 175
IVGYALQC+ H+ CVS+E++RRRR GV GS + + DSS
Sbjct: 121 WIVGYALQCILHIVCVSVEYRRRRRRAGVF------GSEDDGIGSGGSYSSSPQGDSSQY 174
Query: 176 --VAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVG 233
VAK+LESANT SF+WWI+GFYW++A G+ L SPQLYWLC+ FL FDV FV+ CV
Sbjct: 175 VTVAKHLESANTMFSFIWWIIGFYWVSAGGQALARDSPQLYWLCIIFLGFDVFFVVFCVA 234
Query: 234 VACLIGIAVCCCLPCILGILYALTER 259
+AC+IGIAVCCCLPCI+ ILYA+ ++
Sbjct: 235 LACVIGIAVCCCLPCIIAILYAVADQ 260
>gi|356521151|ref|XP_003529221.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
Length = 352
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 114/228 (50%), Positives = 146/228 (64%), Gaps = 12/228 (5%)
Query: 32 RRPPPPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLW 91
R P P L A LL RA GRR PS+ VRETAA +LEER++ W YS+P++ LD+ W
Sbjct: 27 RAPVPTL----ALLLGRA-GRR----GPSMLVRETAARELEERRADWGYSKPVVALDMSW 77
Query: 92 NLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDS 151
N+ FV+V +L + E+P P+R+ IVGYALQCL HV V LE++RR R + G
Sbjct: 78 NMAFVVVTAVMLACTTAERPNTPIRVWIVGYALQCLVHVLLVWLEYRRRSRRDSH-HGQR 136
Query: 152 VSGSSSTTVTGDEEERFHGENDS--SVAKNLESANTFLSFLWWIVGFYWITASGETLISC 209
S +GDE+ + S S K E NT +SFLWWIVGFYW+ + G L+
Sbjct: 137 ARDVESDAGSGDEDYSDDRDWSSGYSFTKRCELLNTGVSFLWWIVGFYWVVSGGNILLQD 196
Query: 210 SPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALT 257
+P+LYWL V FLAFDV F + CV +ACLIGIA+CCCLPCI+ ILYA+
Sbjct: 197 APRLYWLVVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVA 244
>gi|302774967|ref|XP_002970900.1| hypothetical protein SELMODRAFT_66382 [Selaginella moellendorffii]
gi|300161611|gb|EFJ28226.1| hypothetical protein SELMODRAFT_66382 [Selaginella moellendorffii]
Length = 321
Score = 200 bits (508), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 112/211 (53%), Positives = 147/211 (69%), Gaps = 7/211 (3%)
Query: 56 LREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPL 115
+RE S+ VRETA EQL+ERQS WAYSRP++VLD++WNL FV VA VL +S +E+P PL
Sbjct: 1 MRESSILVRETAVEQLDERQSDWAYSRPVVVLDLIWNLAFVTVALVVLVISQSEQPCTPL 60
Query: 116 RLRIVGYALQCLFHVFCVSLEFKRR----RRGEGVVFGDSVSGSSSTTVTGDEEERFHGE 171
R+ ++GYALQC+ H+ CV E++RR G G+ D ++ G
Sbjct: 61 RIWVLGYALQCVLHMSCVVSEYRRRRRRRSSGAGMELEDMEDNEIDHISNEEKHSLLTGS 120
Query: 172 ND---SSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFV 228
+ S+AK LESANT SF+WW+VGFYWITA E L+ SP++YWLC+ FLAFDV FV
Sbjct: 121 SFFPFCSLAKRLESANTMFSFVWWVVGFYWITAGSEALVQSSPRVYWLCIVFLAFDVFFV 180
Query: 229 MICVGVACLIGIAVCCCLPCILGILYALTER 259
+ CV +AC+IGIAVCCCLPCI+ ILYA+ ++
Sbjct: 181 VFCVALACMIGIAVCCCLPCIIAILYAVVDQ 211
>gi|356513054|ref|XP_003525229.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like isoform 2 [Glycine
max]
Length = 334
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 112/244 (45%), Positives = 146/244 (59%), Gaps = 24/244 (9%)
Query: 19 SLPDHLIRSRRLLRRPPPPLRGAAARL--LRRASGRRLMLREPSVRVRETAAEQLEERQS 76
S P+ + +S L P P AAARL L GRR S VRETAA +LEER++
Sbjct: 2 SSPNSVPQSHAPLLLPRP---DAAARLPILALLLGRR----GHSAVVRETAARELEERRA 54
Query: 77 YWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLE 136
W YS+P++ LD+ WN+ FV+V+ +L ++ E P P+R I GYALQCL HV V LE
Sbjct: 55 DWTYSKPVVALDITWNMAFVLVSAVMLACTVKENPNTPIRWWICGYALQCLVHVALVWLE 114
Query: 137 FKRRRRGEGVVFGDSVSGSS---STTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWI 193
++RR D S +S DE+ RF K S NT +S LWW+
Sbjct: 115 YRRRNDAPR----DEESAASLQYDDVNDSDEDARF--------TKRCASLNTMISLLWWM 162
Query: 194 VGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGIL 253
VGFYW+ + G+ L+ +P+LYWL V FLAFDV F + CV +ACLIGIA+CCCLPCI+ IL
Sbjct: 163 VGFYWVVSGGDILLQDAPRLYWLSVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAIL 222
Query: 254 YALT 257
YA+
Sbjct: 223 YAVA 226
>gi|297844168|ref|XP_002889965.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297335807|gb|EFH66224.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 335
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 116/222 (52%), Positives = 156/222 (70%), Gaps = 18/222 (8%)
Query: 56 LREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPL 115
+REPS+ VRE AAEQLEERQS WAYS+P++VLD++WNL FV VA A+L +S NE P +PL
Sbjct: 1 MREPSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNLAFVSVATAILVMSRNEHPIMPL 60
Query: 116 RLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVTGD---EEE-----R 167
R+ ++GYALQC+ H+ CV +E++RR R + SS++ + EE+ R
Sbjct: 61 RVWLLGYALQCVLHMVCVCVEYRRRNRRRTNRTTTTPRSRSSSSSSSSSSLEEDALGSRR 120
Query: 168 FHGEND----------SSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLC 217
GE D SSVAK+LESANT SF+WWI+GFYW++A G+ L SP++YWL
Sbjct: 121 NSGEQDLSLGHLDTESSSVAKHLESANTMFSFIWWIIGFYWVSAGGQELAQESPRIYWLS 180
Query: 218 VTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTER 259
+ FL FDV FV+ CV +AC+IGIAVCCCLPCI+ +LYA+ ++
Sbjct: 181 IVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAVADQ 222
>gi|356524591|ref|XP_003530912.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
Length = 360
Score = 192 bits (489), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 108/235 (45%), Positives = 142/235 (60%), Gaps = 15/235 (6%)
Query: 32 RRPPPPL----RGAAARL--LRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPII 85
R+P PL AAARL L GRR SV VRETAA +LEER++ W YS+P++
Sbjct: 8 RQPHAPLLLPRPDAAARLPVLALLLGRR----GHSVMVRETAARELEERRADWTYSKPVV 63
Query: 86 VLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEG 145
LD+ WN+ FV+V+ +L ++ E P P+R I GYALQCL HV V LE++RR G
Sbjct: 64 ALDMTWNMAFVVVSAVMLACTVKENPNTPIRWWICGYALQCLLHVALVWLEYRRRNDAPG 123
Query: 146 VVFGDSVSG---SSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITAS 202
DS + D+ + + K S NT +S LWW+VGFYW+ +
Sbjct: 124 --DEDSAANLDYDDVNDSDEDDVGTSGSSSSTGFTKRCASLNTMISLLWWMVGFYWVVSG 181
Query: 203 GETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALT 257
G+ L+ +P+LYWL V FLAFDV F + CV +ACLIGIA+CCCLPCI+ ILYA+
Sbjct: 182 GDILLQDAPRLYWLTVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVA 236
>gi|79317862|ref|NP_001031032.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
gi|222424260|dbj|BAH20087.1| AT1G12760 [Arabidopsis thaliana]
gi|332190804|gb|AEE28925.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
Length = 337
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 110/224 (49%), Positives = 147/224 (65%), Gaps = 20/224 (8%)
Query: 56 LREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPL 115
+REPS+ VRE AAEQLEERQS WAYS+P++VLD++WNL FV VA A+L +S E P +PL
Sbjct: 1 MREPSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNLAFVSVATAILVMSRKEHPIMPL 60
Query: 116 RLRIVGYALQCLFHVFCVSLEFKRRRRGEGVV--------------------FGDSVSGS 155
R+ ++GYALQC+ H+ CV +E++RR R + GS
Sbjct: 61 RVWLLGYALQCVLHMVCVCVEYRRRNRRRTNRTTTTTPPRSRSSSSSSSSSSLEEEALGS 120
Query: 156 SSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYW 215
+ D SSVAK+LESANT SF+WWI+GFYW++A G+ L SP++YW
Sbjct: 121 RRNSGVQDLSLGHLDTESSSVAKHLESANTMFSFIWWIIGFYWVSAGGQELAQESPRIYW 180
Query: 216 LCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTER 259
L + FL FDV FV+ CV +AC+IGIAVCCCLPCI+ +LYA+ ++
Sbjct: 181 LSIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAVADQ 224
>gi|356513052|ref|XP_003525228.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like isoform 1 [Glycine
max]
Length = 344
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/241 (44%), Positives = 143/241 (59%), Gaps = 10/241 (4%)
Query: 19 SLPDHLIRSRRLLRRPPPPLRGAAARL--LRRASGRRLMLREPSVRVRETAAEQLEERQS 76
S P+ + +S L P P AAARL L GRR S VRETAA +LEER++
Sbjct: 2 SSPNSVPQSHAPLLLPRP---DAAARLPILALLLGRR----GHSAVVRETAARELEERRA 54
Query: 77 YWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLE 136
W YS+P++ LD+ WN+ FV+V+ +L ++ E P P+R I GYALQCL HV V LE
Sbjct: 55 DWTYSKPVVALDITWNMAFVLVSAVMLACTVKENPNTPIRWWICGYALQCLVHVALVWLE 114
Query: 137 FKRRRRG-EGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVG 195
++RR S+ D+ + S K S NT +S LWW+VG
Sbjct: 115 YRRRNDAPRDEESAASLQYDDVNDSDEDDVGTSGSSSSSGFTKRCASLNTMISLLWWMVG 174
Query: 196 FYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYA 255
FYW+ + G+ L+ +P+LYWL V FLAFDV F + CV +ACLIGIA+CCCLPCI+ ILYA
Sbjct: 175 FYWVVSGGDILLQDAPRLYWLSVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYA 234
Query: 256 L 256
+
Sbjct: 235 V 235
>gi|30677954|ref|NP_849924.1| E3 ubiquitin protein ligase RIE1 [Arabidopsis thaliana]
gi|75299491|sp|Q8GUU2.1|RIE1_ARATH RecName: Full=E3 ubiquitin protein ligase RIE1; AltName:
Full=Protein RING-FINGER FOR EMBRYOGENESIS 1
gi|27372067|gb|AAN87884.1| RES protein [Arabidopsis thaliana]
gi|330250396|gb|AEC05490.1| E3 ubiquitin protein ligase RIE1 [Arabidopsis thaliana]
Length = 359
Score = 187 bits (474), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 95/216 (43%), Positives = 128/216 (59%), Gaps = 4/216 (1%)
Query: 41 AAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAF 100
A A LL R +G R PS+ VRETAA LEER+ W YS+P++ D+LWN V+ +
Sbjct: 38 ALAVLLGRITGHR----APSMLVRETAARALEERRIDWGYSKPVVAADILWNAALVLASA 93
Query: 101 AVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTV 160
+L ++ E+P P+R+ I Y LQCLFHV V E+ RR +S
Sbjct: 94 VMLVGTVEERPNEPIRVWICVYGLQCLFHVVLVWSEYWRRNSTRRARDLESYDHEDYNIE 153
Query: 161 TGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTF 220
E++ S K ES NT +SF+WWI+GFYW+ G+ L+ +P LYWL V F
Sbjct: 154 YDYEQDSDDNSTTYSFVKRCESINTVISFIWWIIGFYWVVEGGDKLLGEAPNLYWLSVIF 213
Query: 221 LAFDVVFVMICVGVACLIGIAVCCCLPCILGILYAL 256
LA DV F + CV +ACL+GIA+CCCLPCI+ +LYA+
Sbjct: 214 LAIDVFFAVFCVVLACLVGIALCCCLPCIIALLYAV 249
>gi|413923908|gb|AFW63840.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 364
Score = 186 bits (473), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 105/233 (45%), Positives = 136/233 (58%), Gaps = 7/233 (3%)
Query: 31 LRRPPPPLRGAAARLLRRAS--GRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLD 88
L PPP +AAR R A+ GR R PS+ V E QL R++ WA+SRP++ LD
Sbjct: 31 LSSPPP----SAARPSRLAALIGRVGWPRGPSMMVHEATTLQLHRRRADWAHSRPVVTLD 86
Query: 89 VLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVF 148
+ WN+ A VL S + P PLRL +VGYA QCL HV V + R R
Sbjct: 87 IAWNVACAAAAALVLASSAKDSPVKPLRLWLVGYAAQCLVHVGIVFTRLETRARHAWGPA 146
Query: 149 GDSVSGSSSTTVTG-DEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLI 207
D S + T +G D E+ E SS A E+ N +SFLWWI+GFYW+ + GE L
Sbjct: 147 SDVESAGAGTDSSGTDSEDDETAEGRSSHASRCETINRLISFLWWIIGFYWLVSGGEVLE 206
Query: 208 SCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTERV 260
+P+LYWL + FLAFDV F + CV ++C IGIA+CCCLPC++ ILYAL +V
Sbjct: 207 YGAPRLYWLTIVFLAFDVFFAVFCVAMSCFIGIALCCCLPCVVAILYALAGKV 259
>gi|226501326|ref|NP_001149757.1| LOC100283384 [Zea mays]
gi|195632056|gb|ACG36686.1| protein binding protein [Zea mays]
gi|413938751|gb|AFW73302.1| putative RING zinc finger domain superfamily protein isoform 1 [Zea
mays]
gi|413938752|gb|AFW73303.1| putative RING zinc finger domain superfamily protein isoform 2 [Zea
mays]
Length = 367
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/229 (49%), Positives = 143/229 (62%), Gaps = 11/229 (4%)
Query: 34 PPP----PLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDV 89
PPP P R AA L+ RA+GRR PS+ VRETAA QL+ R++ WA+SRP++ LD+
Sbjct: 37 PPPSAVRPSRLAA--LIGRAAGRR----GPSMLVRETAALQLQRRRADWAHSRPVLALDI 90
Query: 90 LWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFG 149
WN+ F A AVL S E P PLRL +VGYA QCL HV V + +R R
Sbjct: 91 AWNVAFAAAAAAVLSSSAEESPVKPLRLWVVGYAAQCLVHVGLVCADTRRETRRARRSAS 150
Query: 150 DSVS-GSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLIS 208
D S G+ + + D E+ E SS E+ NT +SFLWWI+GFYWI + GE L
Sbjct: 151 DVESAGAGTDSSDADSEDDERAEGRSSYTGRCETMNTLISFLWWIIGFYWIFSGGEVLEH 210
Query: 209 CSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALT 257
+P+LYWL + FLAFDV F + CV VAC IGIA+CCCLPC++ ILYAL
Sbjct: 211 GAPRLYWLTIVFLAFDVFFAVFCVAVACFIGIALCCCLPCVIAILYALA 259
>gi|224108271|ref|XP_002314782.1| predicted protein [Populus trichocarpa]
gi|222863822|gb|EEF00953.1| predicted protein [Populus trichocarpa]
Length = 295
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/215 (48%), Positives = 136/215 (63%), Gaps = 26/215 (12%)
Query: 43 ARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAV 102
A LL RA+GRR PS+ VRETAA +L+ER++ YS+P++ LD+LWN FV+V+ +
Sbjct: 1 AVLLGRATGRR----GPSMLVRETAARELDERRADLGYSKPVVALDILWNAAFVVVSVTM 56
Query: 103 LGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVTG 162
L V+ E+P P+RL I GY+LQCL HV V LE++ +T
Sbjct: 57 LVVTAKERPNTPIRLWICGYSLQCLVHVILVWLEYR----------------RRNTRRGR 100
Query: 163 DEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLA 222
D E H K ES NT +SFLWWIVGFYW+ + G+ L+ +P+LYWL V FLA
Sbjct: 101 DVESEQH------FTKRCESVNTMVSFLWWIVGFYWVVSGGDALLQNAPRLYWLAVVFLA 154
Query: 223 FDVVFVMICVGVACLIGIAVCCCLPCILGILYALT 257
FDV F + CV +ACLIGIA+CCCLPCI+ ILYA+
Sbjct: 155 FDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVA 189
>gi|242062606|ref|XP_002452592.1| hypothetical protein SORBIDRAFT_04g028660 [Sorghum bicolor]
gi|241932423|gb|EES05568.1| hypothetical protein SORBIDRAFT_04g028660 [Sorghum bicolor]
Length = 366
Score = 183 bits (465), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 108/216 (50%), Positives = 137/216 (63%), Gaps = 5/216 (2%)
Query: 43 ARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAV 102
A L+ RA+GRR PS+ VRETAA QL+ R++ WA+SRP++ LD+ WN+ F A AV
Sbjct: 47 AALIGRAAGRR----GPSMLVRETAALQLQRRRADWAHSRPVVALDIAWNVAFAAAAAAV 102
Query: 103 LGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVS-GSSSTTVT 161
L S E P PLRL +VGYA QCL HV V + +R R D S G+ + +
Sbjct: 103 LASSAEESPVKPLRLWLVGYAAQCLVHVGLVCADTRRGTRRARGSASDVESAGAGTDSSD 162
Query: 162 GDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFL 221
D E+ E SS E+ NT +SFLWWI+GFYW+ + GE L +P+LYWL V FL
Sbjct: 163 ADSEDDERAEGRSSRTSRCETMNTLISFLWWIIGFYWLVSGGEVLEYGAPRLYWLTVVFL 222
Query: 222 AFDVVFVMICVGVACLIGIAVCCCLPCILGILYALT 257
AFDV F + CV VAC IGIA+CCCLPC++ ILYAL
Sbjct: 223 AFDVFFAVFCVAVACFIGIALCCCLPCVIAILYALA 258
>gi|168064697|ref|XP_001784296.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664172|gb|EDQ50902.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 296
Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 110/204 (53%), Positives = 142/204 (69%), Gaps = 21/204 (10%)
Query: 56 LREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPL 115
+REPS+ VRE+AAEQLE RQS WAYS+P++VLD++WNL FV+++ AVL +S EK L
Sbjct: 1 MREPSMLVRESAAEQLEVRQSDWAYSKPVVVLDLIWNLAFVLLSLAVLVLSRKEKNCTEL 60
Query: 116 RLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVTGDEEERFHGENDSS 175
R+ IVGYALQC+ H+ CV E+ RR++ + +S S
Sbjct: 61 RIWIVGYALQCVVHMLCVCCEYLRRQQQQQQANANS---------------------SLS 99
Query: 176 VAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVA 235
AK LESANT SF+WWIVGFYWITA G++L +P +YWLCV FLAFDV FV+ CV +A
Sbjct: 100 WAKRLESANTMFSFVWWIVGFYWITAGGQSLAVDAPHVYWLCVVFLAFDVFFVVFCVALA 159
Query: 236 CLIGIAVCCCLPCILGILYALTER 259
C+IGIAVCCCLPCI+ ILYA+ ++
Sbjct: 160 CVIGIAVCCCLPCIIAILYAVADQ 183
>gi|357138212|ref|XP_003570691.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Brachypodium
distachyon]
Length = 366
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/262 (44%), Positives = 152/262 (58%), Gaps = 12/262 (4%)
Query: 3 MNPPADAAETSP---LLAHSLPDHLIRSRRLLRRPPPPLRGA-AARLLRRASGRRLMLRE 58
M P AD + SP LL PPP R + A L+ RA+GRR
Sbjct: 1 MEPAADDSPPSPQQPLLGSPYAGAASGPGNHQASPPPAARPSRLAALIGRAAGRR----G 56
Query: 59 PSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLR 118
PS+ VRETAA QLE R++ WA+SRP++ LDV WN+ F A AVL S E P PLRL
Sbjct: 57 PSMLVRETAALQLERRRADWAHSRPVVALDVAWNVAFAAAAAAVLAASAAESPAKPLRLW 116
Query: 119 IVGYALQCLFHVFCV----SLEFKRRRRGEGVVFGDSVSGSSSTTVTGDEEERFHGENDS 174
+VGYALQC+ HV V + R V D+ + + + D+++ + S
Sbjct: 117 LVGYALQCVVHVSLVCSGPGRRRRAARARGPDVESDAANAGPDGSGSEDDDDEEAMDERS 176
Query: 175 SVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGV 234
S + ES NT +SFLWWI+GFYW+ + G+ L +P+LYWL V FLAFDV F + CV V
Sbjct: 177 SSVERCESVNTLVSFLWWIIGFYWVVSGGDMLEQGAPRLYWLTVVFLAFDVFFAVFCVAV 236
Query: 235 ACLIGIAVCCCLPCILGILYAL 256
AC IG+A+CCCLPC++ ILYAL
Sbjct: 237 ACFIGVALCCCLPCVVAILYAL 258
>gi|147777193|emb|CAN65431.1| hypothetical protein VITISV_017099 [Vitis vinifera]
Length = 342
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/253 (50%), Positives = 160/253 (63%), Gaps = 31/253 (12%)
Query: 7 ADAAETSPLLAHSLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRET 66
ADA +T+PLL S+ D ++RSRRL+RRPP LRGAA R LRRAS RR+M REPS+RVRET
Sbjct: 8 ADATDTTPLLHASVSDQILRSRRLIRRPPS-LRGAA-RFLRRASSRRIM-REPSMRVRET 64
Query: 67 AAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQC 126
AAEQLEERQS WAYS+PI++LD++WNL FV+VA VL +S +E P PLRL I+GY LQC
Sbjct: 65 AAEQLEERQSDWAYSKPIVILDIVWNLAFVVVAMTVLVMSRDETPSTPLRLWIIGYGLQC 124
Query: 127 LFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTF 186
+ H+ C+ +E+KRRR + +V S E D + +E N
Sbjct: 125 VLHMVCICVEYKRRRH---LASSGAVERSGGWGSGHLSSSSGSDEGD-PIDYRVEVRN-- 178
Query: 187 LSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCL 246
ET LC+ FLAFDV FV+ICV VAC+IGIAVCCCL
Sbjct: 179 -------------RVEDETR---------LCIVFLAFDVFFVVICVAVACVIGIAVCCCL 216
Query: 247 PCILGILYALTER 259
PCI+ ILY + ++
Sbjct: 217 PCIIAILYTVADQ 229
>gi|414884509|tpg|DAA60523.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 209
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/177 (55%), Positives = 123/177 (69%), Gaps = 20/177 (11%)
Query: 38 LRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVI 97
LRGAA R +RR RRLM REPSV VRETAAE LEERQ+ WAYS+P++VLD+LWNL FV
Sbjct: 44 LRGAA-RFIRRTGSRRLM-REPSVAVRETAAEHLEERQTDWAYSKPVVVLDMLWNLAFVA 101
Query: 98 VAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSS 157
VA AVL S+ E+P VPLR+ IVGY LQCL HV V++E++RRRR ++
Sbjct: 102 VAAAVLAASVGERPTVPLRVWIVGYVLQCLLHVLSVTVEYRRRRR------------NAD 149
Query: 158 TTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLY 214
GDE+ + S+ K+LESANT SF+WWIVGFYW++A G+ L +PQLY
Sbjct: 150 QEGAGDEDLKL------SIVKHLESANTMFSFIWWIVGFYWVSAGGKALSHDAPQLY 200
>gi|326489597|dbj|BAK01779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 367
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 111/219 (50%), Positives = 143/219 (65%), Gaps = 11/219 (5%)
Query: 43 ARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAV 102
A L+ RA+GRR PS+ VRETAA QL+ R++ WA+SRP++ LDV WN+ F A AV
Sbjct: 47 AALIGRAAGRR----GPSMLVRETAALQLDRRRADWAHSRPVVALDVAWNVAFAAAAAAV 102
Query: 103 LGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRR----RRGEGVVFGDSVSG-SSS 157
L S E P PLRL +VGYALQC+ HV V +RR RG + G + +G +SS
Sbjct: 103 LAASTAESPGKPLRLWLVGYALQCVVHVSLVCSGSRRRPAAPARGPDIESGAATAGANSS 162
Query: 158 TTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLC 217
+ G++EE E +S ES NT +SFLWWI+GFYW+ G+ L +P+LYWL
Sbjct: 163 ESDEGNDEEAM--EERASSTDRCESVNTMVSFLWWIIGFYWVVTGGDVLEQGAPRLYWLT 220
Query: 218 VTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYAL 256
V FLAFDV F + CV VAC IG+A+CCCLPC++ ILYAL
Sbjct: 221 VVFLAFDVFFAVFCVVVACFIGVALCCCLPCVVAILYAL 259
>gi|218191528|gb|EEC73955.1| hypothetical protein OsI_08846 [Oryza sativa Indica Group]
Length = 322
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 95/213 (44%), Positives = 123/213 (57%), Gaps = 25/213 (11%)
Query: 70 QLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFH 129
QLE R++ WA+SRP++ LD+ WN+ F A AVL S E P PLRL +VGYALQCL H
Sbjct: 2 QLERRRADWAHSRPVVALDIAWNVAFAAAAAAVLVASTEESPVTPLRLWLVGYALQCLVH 61
Query: 130 VFCVSLEFKRR---RRGEGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTF 186
V V + +RR R V D + + T + +++ E SS AK ES NT
Sbjct: 62 VGLVCSDSRRRPAHARSSDVESADGDAAGAGTDSSDSDDDDEGREQRSSFAKRCESINTM 121
Query: 187 LSFLWWIVGFYWITASGETLISCSPQLYWLC----------------------VTFLAFD 224
+SFLWWI+GFYW+ + G+ L +P+LYW C V FLAFD
Sbjct: 122 VSFLWWIIGFYWVVSGGDVLEQDAPRLYWYCGPKPVPITDYFMIVQSNVHMLSVVFLAFD 181
Query: 225 VVFVMICVGVACLIGIAVCCCLPCILGILYALT 257
V F + CV +AC IGIA+CCCLPC++ ILYAL
Sbjct: 182 VFFAVFCVAMACFIGIALCCCLPCVIAILYALA 214
>gi|225440256|ref|XP_002283980.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
vinifera]
Length = 331
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 107/180 (59%), Gaps = 27/180 (15%)
Query: 80 YSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKR 139
+S+PI+VLDV+WNL FV V+ VL + E+P PLR+ I GYALQCL HV V +F+R
Sbjct: 71 FSKPIVVLDVIWNLAFVSVSMVVLLSTFQERPSRPLRVWIFGYALQCLLHVGFVCFQFRR 130
Query: 140 RRRGEGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWI 199
R G+E+ SS+ K LES NT S +WW+ GF WI
Sbjct: 131 R--------------------NGNEDRH------SSIVKRLESMNTMFSSVWWVFGFCWI 164
Query: 200 TASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTER 259
A G+ L+ SP+LYWL V FLAFDV F+M C+G+AC+ A+ CC+P + I YA+ R
Sbjct: 165 LAGGQVLMQDSPRLYWLAVVFLAFDVFFMMFCIGMACIFFFALFCCIP-LAAIAYAMKIR 223
>gi|118489291|gb|ABK96450.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 218
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/195 (42%), Positives = 119/195 (61%), Gaps = 7/195 (3%)
Query: 24 LIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRP 83
L+R R+ P + + LL RA+GRR PS+ VRETAA +L+ER++ W YS+P
Sbjct: 11 LLRPRQDPPTSPTSRQTTLSALLGRATGRR----GPSMLVRETAARELDERRADWGYSKP 66
Query: 84 IIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRG 143
++ LD++WN FV+V+ +L V++ E+P P+R+ I GYALQCL HV V LE++RR
Sbjct: 67 VVSLDMMWNAAFVVVSVTMLLVTVKERPNTPIRIWICGYALQCLVHVVLVWLEYRRRNTR 126
Query: 144 EGVVFGDSVSGSSSTTV--TGDEEERFHG-ENDSSVAKNLESANTFLSFLWWIVGFYWIT 200
+ V + DE++R SSV K ES NT +SFLWW+VGFYW+
Sbjct: 127 RERDIESQQQSTEEENVPESDDEDDRASFISPRSSVTKRCESVNTMVSFLWWMVGFYWVV 186
Query: 201 ASGETLISCSPQLYW 215
+ G+ L+ +P+LYW
Sbjct: 187 SGGDVLLQNAPRLYW 201
>gi|297737629|emb|CBI26830.3| unnamed protein product [Vitis vinifera]
Length = 313
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 80/154 (51%), Positives = 96/154 (62%), Gaps = 6/154 (3%)
Query: 109 EKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVTGDEEER- 167
E+P P+RL I GYALQC HV V LE++RR R S + D E+
Sbjct: 8 ERPNTPIRLWICGYALQCGVHVVLVWLEYRRRNRRRVRDEEQQQQPQHSDSDVNDSEDED 67
Query: 168 -----FHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLA 222
G N SSV K ES NT SFLWWIVGFYW+ + GE L+ +P+LYWL V FLA
Sbjct: 68 GNSSASGGFNQSSVTKRCESVNTMASFLWWIVGFYWVVSGGEALLQNAPRLYWLAVVFLA 127
Query: 223 FDVVFVMICVGVACLIGIAVCCCLPCILGILYAL 256
FDV F + CV +ACLIGIA+CCCLPCI+ ILYA+
Sbjct: 128 FDVFFAIFCVVLACLIGIALCCCLPCIIAILYAV 161
>gi|449437970|ref|XP_004136763.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
Length = 336
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/181 (44%), Positives = 108/181 (59%), Gaps = 22/181 (12%)
Query: 79 AYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFK 138
+YS PI+VLDV+WNL FV+V+ VL + E+P PLRL I GY LQCL HV V E++
Sbjct: 70 SYSMPILVLDVVWNLAFVLVSVVVLFSTFRERPSTPLRLWISGYGLQCLLHVGFVFFEYQ 129
Query: 139 RRRRGEGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYW 198
R G F D + S+ K LES NT S +WW+ GFYW
Sbjct: 130 RSMAHHG--FEDRTA-------------------HRSIMKRLESMNTMTSSVWWVFGFYW 168
Query: 199 ITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTE 258
I G+ L+ SP+LYWL V FLAFD+ F++ C+G+AC+I ++CCC+P I+ YA+T
Sbjct: 169 IVMGGQALLQDSPRLYWLTVVFLAFDLFFILFCIGMACVIFFSLCCCIP-IVAFAYAMTT 227
Query: 259 R 259
R
Sbjct: 228 R 228
>gi|449453127|ref|XP_004144310.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
gi|449488257|ref|XP_004157983.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
Length = 347
Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 109/187 (58%), Gaps = 13/187 (6%)
Query: 79 AYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFK 138
++ +PI+VLD+ WNL FV ++ VL +S EKP PLR + GYA+QCLFHVF V + +
Sbjct: 70 SFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAYL 129
Query: 139 RRRRGEGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYW 198
RR + F + G ++E N V K LE+ NT ++++WW+ GFYW
Sbjct: 130 RRSSRYRLGFENR----------GAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYW 179
Query: 199 ITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTE 258
I G+ L+ SP+LYWL V FLAFDV F++ C G+A + AVCC +P + Y T
Sbjct: 180 IVMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGFFAVCCIIPF---LAYGYTM 236
Query: 259 RVMYGRS 265
+ G S
Sbjct: 237 NFLEGAS 243
>gi|356570399|ref|XP_003553376.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
Length = 327
Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 85/217 (39%), Positives = 120/217 (55%), Gaps = 27/217 (12%)
Query: 43 ARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAV 102
ARL+ AS RRL L + + R + AYSR ++VLD++WNL FV+ A V
Sbjct: 30 ARLIA-ASRRRLFLSDCADH-RSDDDGDSDADAGECAYSRAVLVLDMVWNLAFVVAAAGV 87
Query: 103 LGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVTG 162
L ++ E+P PLRL + GYA +C+ H+ V EF+ R R DS S ++
Sbjct: 88 LLSTLRERPATPLRLWLCGYAFECVLHMAFVYFEFRTRIR-------DSFSHTTY----- 135
Query: 163 DEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLA 222
S+ K LE NT S +WW+ GFYWI G+ L+ SP LYWL V FLA
Sbjct: 136 ------------SIVKKLEPMNTLASSVWWVFGFYWIVVGGQALLEDSPHLYWLTVVFLA 183
Query: 223 FDVVFVMICVGVACLIGIAVCCCLPCILGILYALTER 259
FDV F++ C+G+AC++ A+ C +P I+ + YA+ R
Sbjct: 184 FDVFFIIFCIGMACIVFFALFCIIP-IIALAYAMRIR 219
>gi|297742577|emb|CBI34726.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/164 (54%), Positives = 111/164 (67%), Gaps = 24/164 (14%)
Query: 113 VPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDS-------------VSGSSSTT 159
+PLR IVGYALQC+ H+ CVS+E++RRRR GV FG G SS
Sbjct: 1 MPLRFWIVGYALQCILHIVCVSVEYRRRRRRAGV-FGSEDDGIGSGGSYSSSPQGDSSQY 59
Query: 160 VT----GDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYW 215
VT GDE + SSVAK+LESANT SF+WWI+GFYW++A G+ L SPQLYW
Sbjct: 60 VTLASLGDES------STSSVAKHLESANTMFSFIWWIIGFYWVSAGGQALARDSPQLYW 113
Query: 216 LCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTER 259
LC+ FL FDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA+ ++
Sbjct: 114 LCIIFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVADQ 157
>gi|449516611|ref|XP_004165340.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin protein ligase
RIE1-like [Cucumis sativus]
Length = 264
Score = 139 bits (351), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 105/177 (59%), Gaps = 22/177 (12%)
Query: 83 PIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRR 142
PI+VLDV+WNL FV+V+ VL + E+P PLRL I GY LQCL HV V E++R
Sbjct: 2 PILVLDVVWNLAFVLVSVVVLFSTFRERPSTPLRLWISGYGLQCLLHVGFVFFEYQR--- 58
Query: 143 GEGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITAS 202
S G E+ H S+ K LES NT S +WW+ GFYWI
Sbjct: 59 --------------SMAHHGFEDRTAH----RSIMKRLESMNTMTSSVWWVFGFYWIVMG 100
Query: 203 GETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTER 259
G+ L+ SP+LYWL V FLAFD+ F++ C+G+AC+ ++CCC+P I+ YA+T R
Sbjct: 101 GQALLQDSPRLYWLTVVFLAFDLFFILFCIGMACVXFFSLCCCIP-IVAFAYAMTTR 156
>gi|356504625|ref|XP_003521096.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
Length = 325
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/181 (41%), Positives = 106/181 (58%), Gaps = 25/181 (13%)
Query: 79 AYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFK 138
AYSR ++VLD++WNL FV+VA VL ++ E+P PLRL + GYA +C+ H+ V EF+
Sbjct: 62 AYSRAVLVLDMVWNLAFVVVAAGVLLSTLRERPSTPLRLWLCGYAFECVLHMAFVYFEFR 121
Query: 139 RRRRGEGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYW 198
R DS S ++ S+ K LE NT S +WWI GFYW
Sbjct: 122 TGIR-------DSFSHTAY-----------------SIVKKLEPMNTLASSVWWIFGFYW 157
Query: 199 ITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTE 258
I + L+ SP+LYWL V FLAFDV F++ C+G+AC++ A+ C +P I+ + YA+
Sbjct: 158 IVVGDQALLEDSPRLYWLTVVFLAFDVFFIIFCIGMACIVFFALFCIIP-IIALAYAMRI 216
Query: 259 R 259
R
Sbjct: 217 R 217
>gi|297814408|ref|XP_002875087.1| hypothetical protein ARALYDRAFT_322516 [Arabidopsis lyrata subsp.
lyrata]
gi|297320925|gb|EFH51346.1| hypothetical protein ARALYDRAFT_322516 [Arabidopsis lyrata subsp.
lyrata]
Length = 819
Score = 135 bits (340), Expect = 2e-29, Method: Composition-based stats.
Identities = 80/219 (36%), Positives = 108/219 (49%), Gaps = 52/219 (23%)
Query: 41 AAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAF 100
A A LL R +G R PS+ VRETAA LEER+ W YS+P++ D+LWN V+ +
Sbjct: 602 ALAVLLGRITGHR----APSMLVRETAARALEERRIDWGYSKPVVAADILWNAALVLASA 657
Query: 101 AVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRR---RRGEGVVFGDSVSGSSS 157
+L ++ E+P P+R+ I GY LQCL HV V E+ RR RR + GD
Sbjct: 658 VMLVGTVEERPNEPIRVWICGYGLQCLIHVVLVWSEYWRRNTTRRARDLESGDH------ 711
Query: 158 TTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLC 217
++ + E DS + Y L
Sbjct: 712 -----EDYSVYDYEQDSD----------------------------------NSTTYRLS 732
Query: 218 VTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYAL 256
V FLA DV F + CV +ACL+GIA+CCCLPCI+ +LYA+
Sbjct: 733 VIFLAIDVFFAIFCVVLACLVGIALCCCLPCIIALLYAV 771
>gi|4220489|gb|AAD12712.1| putative cleavage and polyadenylation specifity factor [Arabidopsis
thaliana]
Length = 837
Score = 135 bits (340), Expect = 2e-29, Method: Composition-based stats.
Identities = 81/216 (37%), Positives = 109/216 (50%), Gaps = 44/216 (20%)
Query: 41 AAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAF 100
A A LL R +G R PS+ VRETAA LEER+ W YS+P++ D+LWN V+ +
Sbjct: 613 ALAVLLGRITGHR----APSMLVRETAARALEERRIDWGYSKPVVAADILWNAALVLASA 668
Query: 101 AVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTV 160
+L ++ E+P P+R+ I Y LQCLFHV V E+ RR
Sbjct: 669 VMLVGTVEERPNEPIRVWICVYGLQCLFHVVLVWSEYWRR-------------------- 708
Query: 161 TGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTF 220
N + A++LES + Y I E + Y L V F
Sbjct: 709 -----------NSTRRARDLESYDH---------EDYNIEYDYEQDSDDNSTTYRLSVIF 748
Query: 221 LAFDVVFVMICVGVACLIGIAVCCCLPCILGILYAL 256
LA DV F + CV +ACL+GIA+CCCLPCI+ +LYA+
Sbjct: 749 LAIDVFFAVFCVVLACLVGIALCCCLPCIIALLYAV 784
>gi|297603205|ref|NP_001053593.2| Os04g0568900 [Oryza sativa Japonica Group]
gi|125549384|gb|EAY95206.1| hypothetical protein OsI_17025 [Oryza sativa Indica Group]
gi|125591326|gb|EAZ31676.1| hypothetical protein OsJ_15824 [Oryza sativa Japonica Group]
gi|255675703|dbj|BAF15507.2| Os04g0568900 [Oryza sativa Japonica Group]
Length = 267
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/154 (51%), Positives = 108/154 (70%), Gaps = 7/154 (4%)
Query: 113 VPLRLRIVGYALQCLFHVFCVSLEFKRRR--RGEGVVFGDS-----VSGSSSTTVTGDEE 165
+PLR + GYALQC+ H+ CV++E++ RR R D S SSS +++
Sbjct: 1 MPLRTWVAGYALQCVVHMVCVAIEYRMRRGQRDRAPASADEERGSDGSSSSSDDDVTEDD 60
Query: 166 ERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDV 225
R + S+AK+LESANT SF+WWI+GFYWI+A GE +I +PQLYWLC+ FLAFDV
Sbjct: 61 RRGSCTDCVSIAKHLESANTMFSFIWWIIGFYWISAGGEDVIRDAPQLYWLCIVFLAFDV 120
Query: 226 VFVMICVGVACLIGIAVCCCLPCILGILYALTER 259
FV+ CV +AC+IGIAVCCCLPCI+ ILYA++++
Sbjct: 121 FFVVFCVALACIIGIAVCCCLPCIIAILYAVSDQ 154
>gi|357509161|ref|XP_003624869.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|355499884|gb|AES81087.1| E3 ubiquitin-protein ligase [Medicago truncatula]
Length = 297
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 107/180 (59%), Gaps = 25/180 (13%)
Query: 80 YSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKR 139
YSR ++V+D++WNL FV+VA AV+ + NE+P PLRL + GYA +CL HV V EF+
Sbjct: 35 YSRAVLVVDMVWNLAFVVVAAAVILSTFNERPSTPLRLWLCGYAFECLLHVAFVFSEFRV 94
Query: 140 RRRGEGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWI 199
R DS S + S+AK LE NT S +WW+ GFYWI
Sbjct: 95 TTR-------DSFSHTPY-----------------SIAKKLEPMNTLASSVWWVFGFYWI 130
Query: 200 TASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTER 259
G+ L+ SP+LYWL V FLAFDV F++ C+G+AC++ A+ C +P I+ + YAL R
Sbjct: 131 VVGGQPLLEDSPRLYWLTVVFLAFDVFFIIFCIGMACIVFFALFCIIP-IIALAYALRIR 189
>gi|414589110|tpg|DAA39681.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 199
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 72/85 (84%)
Query: 175 SVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGV 234
S+ K+LESANT SF+WWI+GFYW++A G+ L +PQLYWL + FLAFDV FV+ C+ +
Sbjct: 3 SIVKHLESANTMFSFIWWILGFYWVSAGGQALSHDAPQLYWLTIVFLAFDVFFVVFCIAL 62
Query: 235 ACLIGIAVCCCLPCILGILYALTER 259
AC+IGIAVCCCLPCI+GILYA+T++
Sbjct: 63 ACVIGIAVCCCLPCIIGILYAVTDQ 87
>gi|297741734|emb|CBI32866.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 89/158 (56%), Gaps = 27/158 (17%)
Query: 102 VLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVT 161
VL + E+P PLR+ I GYALQCL HV V +F+RR
Sbjct: 3 VLLSTFQERPSRPLRVWIFGYALQCLLHVGFVCFQFRRR--------------------N 42
Query: 162 GDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFL 221
G+E+ SS+ K LES NT S +WW+ GF WI A G+ L+ SP+LYWL V FL
Sbjct: 43 GNEDRH------SSIVKRLESMNTMFSSVWWVFGFCWILAGGQVLMQDSPRLYWLAVVFL 96
Query: 222 AFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTER 259
AFDV F+M C+G+AC+ A+ CC+P + I YA+ R
Sbjct: 97 AFDVFFMMFCIGMACIFFFALFCCIP-LAAIAYAMKIR 133
>gi|308081813|ref|NP_001182980.1| uncharacterized protein LOC100501295 [Zea mays]
gi|238008582|gb|ACR35326.1| unknown [Zea mays]
Length = 167
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/116 (61%), Positives = 87/116 (75%), Gaps = 7/116 (6%)
Query: 38 LRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVI 97
LRGAA R +RR RRLM REPSV VRETAAE LEERQ+ WAYS+P+IV+D+LWN+ FV
Sbjct: 43 LRGAA-RFIRRTGSRRLM-REPSVAVRETAAEHLEERQTDWAYSKPVIVVDMLWNVAFVA 100
Query: 98 VAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRR-----GEGVVF 148
+A AV+ S+ E P VPLR+ I GY LQCL H+ CV++E++RRRR G GV F
Sbjct: 101 IAAAVVAASLGEIPAVPLRVWIAGYVLQCLLHILCVTVEYRRRRRDADQEGVGVDF 156
>gi|223972729|gb|ACN30552.1| unknown [Zea mays]
Length = 166
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/112 (60%), Positives = 87/112 (77%), Gaps = 5/112 (4%)
Query: 38 LRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVI 97
LRGAA R +RR +G R ++REPSV VRETAAE LEERQ+ WAYS+P++V+D+LWN+ FV
Sbjct: 43 LRGAA-RFIRR-TGSRSLMREPSVAVRETAAEHLEERQTDWAYSKPVVVVDMLWNVAFVA 100
Query: 98 VAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRR---GEGV 146
+A AVL S+ E P VPLR+ I GY LQCL H+ CV++E++RRRR G GV
Sbjct: 101 IAAAVLAASLGESPAVPLRVWIAGYVLQCLLHILCVTVEYRRRRRTQEGAGV 152
>gi|29367335|gb|AAO72540.1| ring zinc finger protein-like protein [Oryza sativa Japonica Group]
Length = 250
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 95/137 (69%), Gaps = 7/137 (5%)
Query: 130 VFCVSLEFKRRR--RGEGVVFGDS-----VSGSSSTTVTGDEEERFHGENDSSVAKNLES 182
+ CV++E++ RR R D S SSS +++ R + S+AK+LES
Sbjct: 1 MVCVAIEYRMRRGQRDRAPASADEERGSDGSSSSSDDDVTEDDRRGSCTDCVSIAKHLES 60
Query: 183 ANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAV 242
ANT SF+WWI+GFYWI+A GE +I +PQLYWLC+ FLAFDV FV+ CV +AC+IGIAV
Sbjct: 61 ANTMFSFIWWIIGFYWISAGGEDVIRDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAV 120
Query: 243 CCCLPCILGILYALTER 259
CCCLPCI+ ILYA++++
Sbjct: 121 CCCLPCIIAILYAVSDQ 137
>gi|218191343|gb|EEC73770.1| hypothetical protein OsI_08445 [Oryza sativa Indica Group]
Length = 213
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 72/84 (85%)
Query: 176 VAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVA 235
+AK+LESANT SF+WWI+GFYW++A G+ L +PQLYWLC+ FLAFDV FV+ CV +A
Sbjct: 74 IAKHLESANTMFSFIWWIIGFYWVSAGGQVLTHDAPQLYWLCIVFLAFDVFFVVFCVALA 133
Query: 236 CLIGIAVCCCLPCILGILYALTER 259
C+IGIAVCCCLPCI+ ILYA++++
Sbjct: 134 CIIGIAVCCCLPCIIAILYAVSDQ 157
>gi|224071764|ref|XP_002303570.1| predicted protein [Populus trichocarpa]
gi|222841002|gb|EEE78549.1| predicted protein [Populus trichocarpa]
Length = 208
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/80 (62%), Positives = 63/80 (78%)
Query: 58 EPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRL 117
EPS+ VRETAAEQLEERQS WAYS+P+++LD++WN FV VA VL +S E P VPLRL
Sbjct: 72 EPSMLVRETAAEQLEERQSDWAYSKPVVILDIIWNFAFVAVAAGVLVLSRKENPGVPLRL 131
Query: 118 RIVGYALQCLFHVFCVSLEF 137
I+GY LQC+ H+ CV +E+
Sbjct: 132 WILGYGLQCVLHMVCVCVEY 151
>gi|413923426|gb|AFW63358.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 205
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/85 (67%), Positives = 73/85 (85%)
Query: 175 SVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGV 234
S+AK+LESANT SF+WWI+GFYW++A GE L +PQLYWLC+ FLAFDV FV+ CV +
Sbjct: 8 SIAKHLESANTMFSFVWWIIGFYWVSAGGEVLTRDAPQLYWLCIVFLAFDVFFVVFCVAL 67
Query: 235 ACLIGIAVCCCLPCILGILYALTER 259
AC+IGIAVCCCLPCI+ ILYA++++
Sbjct: 68 ACIIGIAVCCCLPCIIAILYAVSDQ 92
>gi|222623429|gb|EEE57561.1| hypothetical protein OsJ_07906 [Oryza sativa Japonica Group]
Length = 231
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 72/84 (85%)
Query: 176 VAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVA 235
+AK+LESANT SF+WWI+GFYW++A G+ L +PQLYWLC+ FLAFDV FV+ CV +A
Sbjct: 35 IAKHLESANTMFSFIWWIIGFYWVSAGGQVLTHDAPQLYWLCIVFLAFDVFFVVFCVALA 94
Query: 236 CLIGIAVCCCLPCILGILYALTER 259
C+IGIAVCCCLPCI+ ILYA++++
Sbjct: 95 CIIGIAVCCCLPCIIAILYAVSDQ 118
>gi|46390435|dbj|BAD15897.1| RING zinc finger protein-like [Oryza sativa Japonica Group]
Length = 180
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 57/73 (78%)
Query: 187 LSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCL 246
+SFLWWI+GFYW+ + G+ L +P+LYWL V FLAFDV F + CV +AC IGIA+CCCL
Sbjct: 2 VSFLWWIIGFYWVVSGGDVLEQDAPRLYWLSVVFLAFDVFFAVFCVAMACFIGIALCCCL 61
Query: 247 PCILGILYALTER 259
PC++ ILYAL +
Sbjct: 62 PCVIAILYALAGQ 74
>gi|361066495|gb|AEW07559.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
Length = 130
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 67/83 (80%)
Query: 58 EPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRL 117
EPS+ VRE AA+QLEERQS WAYS+P+I+LD+LWNL FV+V+ +L +++E+P PLR+
Sbjct: 48 EPSMLVRENAAQQLEERQSDWAYSKPVIILDILWNLSFVVVSVVILSSTLDERPTTPLRI 107
Query: 118 RIVGYALQCLFHVFCVSLEFKRR 140
IVGYALQC+ H+ V+ E+ RR
Sbjct: 108 WIVGYALQCILHMSYVAYEYIRR 130
>gi|383156391|gb|AFG60447.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156392|gb|AFG60448.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156393|gb|AFG60449.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156394|gb|AFG60450.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156395|gb|AFG60451.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156396|gb|AFG60452.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156397|gb|AFG60453.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156398|gb|AFG60454.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156399|gb|AFG60455.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156400|gb|AFG60456.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156401|gb|AFG60457.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156402|gb|AFG60458.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156403|gb|AFG60459.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156404|gb|AFG60460.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156405|gb|AFG60461.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156406|gb|AFG60462.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156407|gb|AFG60463.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156408|gb|AFG60464.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
Length = 130
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 67/83 (80%)
Query: 58 EPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRL 117
EPS+ VRE AA+QLEERQS WAYS+P+I+LD+LWNL FV+V+ +L +++E+P PLR+
Sbjct: 48 EPSMLVRENAAQQLEERQSDWAYSKPVIILDILWNLSFVVVSVVILSSTLDERPTTPLRI 107
Query: 118 RIVGYALQCLFHVFCVSLEFKRR 140
IVGYALQC+ H+ V+ E+ RR
Sbjct: 108 WIVGYALQCILHMSYVAYEYIRR 130
>gi|361066493|gb|AEW07558.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
Length = 130
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 66/83 (79%)
Query: 58 EPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRL 117
EPS+ VRE AA+QLEERQS WAYS+P+++LD+LWNL FV+V+ +L +++E+P PLR+
Sbjct: 48 EPSMLVRENAAQQLEERQSDWAYSKPVVILDILWNLSFVVVSVVILSSTLDERPTTPLRI 107
Query: 118 RIVGYALQCLFHVFCVSLEFKRR 140
I GYALQC+ H+ V+ E+ RR
Sbjct: 108 WIAGYALQCILHMIYVAYEYIRR 130
>gi|110743179|dbj|BAE99481.1| putative cleavage and polyadenylation specifity factor [Arabidopsis
thaliana]
Length = 180
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 62/100 (62%), Gaps = 4/100 (4%)
Query: 41 AAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAF 100
A A LL R +G R PS+ VRETAA LEER+ W YS+P++ D+LWN V+ +
Sbjct: 38 ALAVLLGRITGHR----APSMLVRETAARALEERRIDWGYSKPVVAADILWNAALVLASA 93
Query: 101 AVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRR 140
+L ++ E+P P+R+ I Y LQCLFHV V E+ RR
Sbjct: 94 VMLVGTVEERPNEPIRVWICVYGLQCLFHVVLVWSEYWRR 133
>gi|224071770|ref|XP_002303571.1| predicted protein [Populus trichocarpa]
gi|222841003|gb|EEE78550.1| predicted protein [Populus trichocarpa]
Length = 180
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 56/68 (82%)
Query: 192 WIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILG 251
WI+GFYW++ G+ L SPQLYWLC+ FL FDV FV+ CV +AC+IGIAVCCCLPCI+
Sbjct: 1 WIIGFYWVSTGGQALALGSPQLYWLCIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIA 60
Query: 252 ILYALTER 259
ILYA+T++
Sbjct: 61 ILYAVTDQ 68
>gi|115448539|ref|NP_001048049.1| Os02g0735900 [Oryza sativa Japonica Group]
gi|113537580|dbj|BAF09963.1| Os02g0735900, partial [Oryza sativa Japonica Group]
Length = 157
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 40/50 (80%)
Query: 210 SPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTER 259
+P+LYWL V FLAFDV F + CV +AC IGIA+CCCLPC++ ILYAL +
Sbjct: 2 APRLYWLSVVFLAFDVFFAVFCVAMACFIGIALCCCLPCVIAILYALAGQ 51
>gi|359482955|ref|XP_002280466.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
vinifera]
gi|297743322|emb|CBI36189.3| unnamed protein product [Vitis vinifera]
Length = 416
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 108/256 (42%), Gaps = 47/256 (18%)
Query: 3 MNPPADAAETSPLLAHSLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVR 62
MNPP E P + P + S RL R + +RR+ G R P
Sbjct: 55 MNPPQH--EERPSSSTQTPTNQTSSNRLNSR--------NSSFMRRSDGYSRRRRSPL-- 102
Query: 63 VRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGY 122
W I ++++ + +I + VL +S +E P PL +VGY
Sbjct: 103 -----------NSGLW------ISVELVVTVSQIIASIVVLSLSRHENPRAPLFAWVVGY 145
Query: 123 ALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVTGDEEERFHG---ENDSSVAKN 179
A C F + L ++ R R + + SV+ +S T RF G S + +
Sbjct: 146 ASGC-FATLPI-LYWRYRTRNQTI----SVNQASETAGAATRRSRFVGIFRMRFSGMVDH 199
Query: 180 LESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC--L 237
+ A +W++VG WI G + S +P+LY LC+ FL F C+G A +
Sbjct: 200 FKMALDCFFAVWFVVGNVWIFG-GHSSPSDAPKLYRLCIVFLTFS------CIGYAMPFI 252
Query: 238 IGIAVCCCLPCILGIL 253
+ +CCCLPCI+ IL
Sbjct: 253 LCATICCCLPCIISIL 268
>gi|225445348|ref|XP_002281595.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
vinifera]
Length = 427
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 88/199 (44%), Gaps = 37/199 (18%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGE 144
I +++++ ++ + VL +S +EKP+ PL +VGYA C + + + RR
Sbjct: 112 ISIEIVFTTSLIVASIVVLSLSRDEKPQTPLFAWVVGYAAGCAASLPILFWRYLRRNHDG 171
Query: 145 GVVFGDSVSGSS--STTVTGD------------EEERFHGENDSSVAKNLESANTFLSFL 190
+ GSS STT+ + EE ++ + ++N LS L
Sbjct: 172 EQGLNHMLQGSSQGSTTLESNSYITISLTRSAAEENLPDASTNTWNGHTMGASNARLSVL 231
Query: 191 --------------WWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC 236
W++VG WI G + + +P LY LC+ FL F C+G A
Sbjct: 232 ADYYKMALDCFFAVWFVVGNVWIFG-GHSSFTAAPNLYRLCIVFLTFS------CIGYAM 284
Query: 237 --LIGIAVCCCLPCILGIL 253
++ +CCCLPCI+ IL
Sbjct: 285 PFILCAMICCCLPCIISIL 303
>gi|297738877|emb|CBI28122.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 88/199 (44%), Gaps = 37/199 (18%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGE 144
I +++++ ++ + VL +S +EKP+ PL +VGYA C + + + RR
Sbjct: 92 ISIEIVFTTSLIVASIVVLSLSRDEKPQTPLFAWVVGYAAGCAASLPILFWRYLRRNHDG 151
Query: 145 GVVFGDSVSGSS--STTVTGD------------EEERFHGENDSSVAKNLESANTFLSFL 190
+ GSS STT+ + EE ++ + ++N LS L
Sbjct: 152 EQGLNHMLQGSSQGSTTLESNSYITISLTRSAAEENLPDASTNTWNGHTMGASNARLSVL 211
Query: 191 --------------WWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC 236
W++VG WI G + + +P LY LC+ FL F C+G A
Sbjct: 212 ADYYKMALDCFFAVWFVVGNVWIFG-GHSSFTAAPNLYRLCIVFLTFS------CIGYAM 264
Query: 237 --LIGIAVCCCLPCILGIL 253
++ +CCCLPCI+ IL
Sbjct: 265 PFILCAMICCCLPCIISIL 283
>gi|125541404|gb|EAY87799.1| hypothetical protein OsI_09219 [Oryza sativa Indica Group]
gi|125583947|gb|EAZ24878.1| hypothetical protein OsJ_08658 [Oryza sativa Japonica Group]
Length = 398
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 26/186 (13%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRR--R 142
I ++VL N+ ++ A VL +S E P+ PL ++GY + C + + + R
Sbjct: 90 ISIEVLVNVSQIVAAIVVLSLSRKEHPQAPLFEWVIGYTVGCFATLPHLYWRYIHRNIVN 149
Query: 143 GEG----VVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSF--------- 189
GE + G S + S+ + + E R N +V N F F
Sbjct: 150 GENEPAHTLQGSSQNNSTEPSASASERRRNAARN--AVLANPRINALFDHFKMALDCFFA 207
Query: 190 LWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC--LIGIAVCCCLP 247
+W++VG WI G + + +P LY LC+ FL F C+G A ++ +CCCLP
Sbjct: 208 VWFVVGNVWIFG-GRSSAADAPNLYRLCIVFLTFS------CIGYAMPFILCAMICCCLP 260
Query: 248 CILGIL 253
CI+ ++
Sbjct: 261 CIISVM 266
>gi|359476391|ref|XP_002284536.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
vinifera]
Length = 421
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 89/197 (45%), Gaps = 35/197 (17%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGE 144
I +++ + +I + VL +S +E P PL IVGYA C+ + + F+ R +G
Sbjct: 109 ISIELALTVSQIIASVVVLSLSRHEHPHAPLFTWIVGYASGCVATLPILYWRFRHRNQGH 168
Query: 145 --------GVVFGDSVSG----SSSTTVTGDEEERFHG----ENDSSVAKNLESANTFLS 188
V F ++ G S S T T +EE+R N SV + +
Sbjct: 169 EQESAQSRQVSFHSNLPGGPTFSLSVTGTSEEEDRQPSVPATRNSQSVRRLSARLKVLVE 228
Query: 189 F----------LWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC-- 236
+ +W++VG WI G + S +P LY LC+ FL F C+G A
Sbjct: 229 YFKMALDCFFAVWFVVGNVWIFG-GHSSSSEAPNLYRLCIVFLTFS------CIGYAMPF 281
Query: 237 LIGIAVCCCLPCILGIL 253
++ +CCCLPCI+ IL
Sbjct: 282 ILCATICCCLPCIISIL 298
>gi|293333937|ref|NP_001169753.1| uncharacterized protein LOC100383634 [Zea mays]
gi|223975755|gb|ACN32065.1| unknown [Zea mays]
gi|224031459|gb|ACN34805.1| unknown [Zea mays]
gi|413939252|gb|AFW73803.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 401
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 83/190 (43%), Gaps = 32/190 (16%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCL----------FHVFCVS 134
I ++V+ N ++ A VL VS E P+ PL ++GY + C H V+
Sbjct: 91 ISIEVIVNFSQIVAAIVVLCVSRKEHPQAPLLEWVIGYTVGCFATLPHLYWRYIHRNIVN 150
Query: 135 LEFKRRRRGEGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSF----- 189
E + +G +S + + + + ER ++V N F F
Sbjct: 151 GEHESSHTPQGSAHNNSNEATHAASAS----ERRRNAARNAVLANPRINALFDHFKMALD 206
Query: 190 ----LWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC--LIGIAVC 243
+W++VG WI G + + +P LY LC+ FL F C+G A ++ +C
Sbjct: 207 CFFAVWFVVGNVWIFG-GRSSAADAPNLYRLCIVFLTFS------CIGYAMPFILCAMIC 259
Query: 244 CCLPCILGIL 253
CCLPCI+ I+
Sbjct: 260 CCLPCIISIM 269
>gi|296081927|emb|CBI20932.3| unnamed protein product [Vitis vinifera]
Length = 401
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 89/197 (45%), Gaps = 35/197 (17%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGE 144
I +++ + +I + VL +S +E P PL IVGYA C+ + + F+ R +G
Sbjct: 89 ISIELALTVSQIIASVVVLSLSRHEHPHAPLFTWIVGYASGCVATLPILYWRFRHRNQGH 148
Query: 145 --------GVVFGDSVSG----SSSTTVTGDEEERFHG----ENDSSVAKNLESANTFLS 188
V F ++ G S S T T +EE+R N SV + +
Sbjct: 149 EQESAQSRQVSFHSNLPGGPTFSLSVTGTSEEEDRQPSVPATRNSQSVRRLSARLKVLVE 208
Query: 189 F----------LWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC-- 236
+ +W++VG WI G + S +P LY LC+ FL F C+G A
Sbjct: 209 YFKMALDCFFAVWFVVGNVWIFG-GHSSSSEAPNLYRLCIVFLTFS------CIGYAMPF 261
Query: 237 LIGIAVCCCLPCILGIL 253
++ +CCCLPCI+ IL
Sbjct: 262 ILCATICCCLPCIISIL 278
>gi|242056191|ref|XP_002457241.1| hypothetical protein SORBIDRAFT_03g003920 [Sorghum bicolor]
gi|241929216|gb|EES02361.1| hypothetical protein SORBIDRAFT_03g003920 [Sorghum bicolor]
Length = 408
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 111/272 (40%), Gaps = 48/272 (17%)
Query: 12 TSPLLAH----SLPDHLIRSRRLLRR-PPPPLRGAAARLLRRASGRRLMLREPSVRVRET 66
TSP +H S D L SR PP P R + + S R+
Sbjct: 22 TSPSTSHQDDPSGLDELHHSRGPSNEVPPGPERSSGTNDASDSHNAS------SARIDRG 75
Query: 67 AAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQC 126
+Q +W I ++++ NL ++ A AVL VS NE P PL ++GY + C
Sbjct: 76 HRQQNPLNSGFW------ISIELIVNLSQIVAAIAVLSVSRNEHPHAPLFTWLLGYTIGC 129
Query: 127 ---LFHVFCVSLEFKRRRRGEGVVFGD------SVSGSSSTTVTGDEEERFHGENDSSVA 177
L H++ L R + + S + S + + E G N + V+
Sbjct: 130 IAILPHLYWRYLHRNRPNMEQEMTPQSLSERNMSETNSYAAVSSPRTSEAVDGTNSTGVS 189
Query: 178 K-NLESA---------------NTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFL 221
+ NL A + F + +W++VG WI S + +P LY +C+ FL
Sbjct: 190 RMNLPLASPRFYAMVACFKLMLDCFFA-VWFVVGNVWIFGSRSSAHD-APNLYRICIVFL 247
Query: 222 AFDVVFVMICVGVACLIGIAVCCCLPCILGIL 253
AF I + ++ +CCCLPCI+ IL
Sbjct: 248 AFG----FIVYALPFILCTMICCCLPCIISIL 275
>gi|357136383|ref|XP_003569784.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Brachypodium
distachyon]
Length = 409
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 37/197 (18%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCL----------FHVFCVS 134
I ++++ N+ +I A AVL VS NE P PL +VGY + C+ H C +
Sbjct: 88 ISIELIVNVSQIIAAIAVLSVSRNEHPRAPLFEWVVGYIIGCVATIPHLYWRYLHRNCQN 147
Query: 135 LEFKRRRRGE---GVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKN------------ 179
+E + +G + DS + SS + E + +N + V++N
Sbjct: 148 IEQEPTTQGSSQRNISESDSFAPISSARAS----EVGNEDNSTGVSRNNFPIASPRVYAL 203
Query: 180 ---LESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC 236
L+ A +W++VG WI G + + +P LY LC+ FL F I +
Sbjct: 204 IACLKLALDCFFAVWFVVGNVWIFG-GRSSVHDAPNLYRLCIVFLTFG----FIGYALPF 258
Query: 237 LIGIAVCCCLPCILGIL 253
++ +CCCLPCI+ ++
Sbjct: 259 ILCTMICCCLPCIISMV 275
>gi|356555922|ref|XP_003546278.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 424
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 85/200 (42%), Gaps = 41/200 (20%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGE 144
I ++++ + +I + VL +S NE P+ PL IVGYA C+ + + F+ R +
Sbjct: 111 ISVELVVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRNQSN 170
Query: 145 GVVFG------------DSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFL-- 190
D S + DEE +G S ++N F S L
Sbjct: 171 EQDTSQASQGSSGSNPPDRSYNSIHVSHVSDEE---NGHATRSASRNTIMPGAFTSRLNG 227
Query: 191 ---------------WWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVA 235
W++VG WI G T S +PQLY LC+ FL F C+G A
Sbjct: 228 LVDHFKMALDCFFAVWFVVGNVWIFG-GHTSPSDAPQLYRLCIVFLTFS------CIGYA 280
Query: 236 C--LIGIAVCCCLPCILGIL 253
++ +CCCLPCI+ +L
Sbjct: 281 MPFILCATICCCLPCIISVL 300
>gi|255552959|ref|XP_002517522.1| ring finger protein, putative [Ricinus communis]
gi|223543154|gb|EEF44686.1| ring finger protein, putative [Ricinus communis]
Length = 421
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 85/197 (43%), Gaps = 35/197 (17%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGE 144
I +++ + +I + VL +S NE P+ PL +VGYA C+ + + F+ R +
Sbjct: 108 ISIELFVTVGQIIASIVVLSLSRNENPQAPLFAWVVGYASGCVATLPILYWRFRNRNQSG 167
Query: 145 GVVFGDSVSGSSSTT------------VTGDEEERFHGE---NDSSVAKNLES-ANTFLS 188
S GSS EE+ F E + + L S N +
Sbjct: 168 QQDSHQSHQGSSQNNPPDTSSYTAISVTQASEEDNFRSELAIANGQTGRPLSSRLNGLMD 227
Query: 189 F----------LWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC-- 236
+W++VG WI G + + +P+LY LC+ FL F C+G A
Sbjct: 228 HFKMALDCFFAVWFVVGNVWIFG-GHSTPTDAPKLYKLCIVFLTFS------CIGYAMPF 280
Query: 237 LIGIAVCCCLPCILGIL 253
++ +CCCLPCI+ +L
Sbjct: 281 ILCATICCCLPCIISLL 297
>gi|115449125|ref|NP_001048342.1| Os02g0787500 [Oryza sativa Japonica Group]
gi|113537873|dbj|BAF10256.1| Os02g0787500, partial [Oryza sativa Japonica Group]
Length = 342
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 22/184 (11%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRR--R 142
I ++VL N+ ++ A VL +S E P+ PL ++GY + C + + + R
Sbjct: 34 ISIEVLVNVSQIVAAIVVLSLSRKEHPQAPLFEWVIGYTVGCFATLPHLYWRYIHRNIVN 93
Query: 143 GEG----VVFGDSVSGSSSTTVTGDEEERFHGEND-------SSVAKNLESANTFLSFLW 191
GE + G S + S+ + + E R N +++ + + A +W
Sbjct: 94 GENEPAHTLQGSSQNNSTEPSASASERRRNAARNAVLANPRINALFDHFKMALDCFFAVW 153
Query: 192 WIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC--LIGIAVCCCLPCI 249
++VG WI G + + +P LY LC+ FL F C+G A ++ +CCCLPCI
Sbjct: 154 FVVGNVWIFG-GRSSAADAPNLYRLCIVFLTFS------CIGYAMPFILCAMICCCLPCI 206
Query: 250 LGIL 253
+ ++
Sbjct: 207 ISVM 210
>gi|357113469|ref|XP_003558525.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Brachypodium
distachyon]
Length = 407
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 30/190 (15%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCL----------FHVFCVS 134
I ++V+ N+ ++ A VL +S E P+ PL ++GY + C H V+
Sbjct: 95 ISIEVIVNVSQIVAAIVVLSLSRKEHPQAPLFEWVIGYTVGCFATLPHLYWRYIHRNIVN 154
Query: 135 LEFKRRRRGEGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSF----- 189
E ++ +G + S + + E R N +V N F F
Sbjct: 155 GENEQAHSLQGSSQSQNNSTEPTHAASASERRRTAARN--AVLANPRINALFDHFKMALD 212
Query: 190 ----LWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC--LIGIAVC 243
+W++VG WI G + + +P LY LC+ FL F C+G A ++ +C
Sbjct: 213 CFFAVWFVVGNVWIFG-GRSSAADAPNLYRLCIVFLTFS------CIGYAMPFILCAMIC 265
Query: 244 CCLPCILGIL 253
CCLPCI+ ++
Sbjct: 266 CCLPCIISVM 275
>gi|356550569|ref|XP_003543658.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 419
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 84/200 (42%), Gaps = 41/200 (20%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGE 144
I ++++ + +I + VL +S NE P+ PL IVGY C+ + + F+ R +
Sbjct: 111 ISVELVVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYGSGCVATLPILYWRFRNRNQSN 170
Query: 145 GVVFG------------DSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFL-- 190
D S + DEE +G S ++N F S L
Sbjct: 171 EQDTSQASQGSSGSNPPDRSYTSIYVSHVSDEE---NGHATQSASRNTIMPGAFTSRLNG 227
Query: 191 ---------------WWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVA 235
W++VG WI G T S +PQLY LC+ FL F C+G A
Sbjct: 228 LVDHFKMALDCFFAVWFVVGNVWIFG-GHTSPSDAPQLYRLCIVFLTFS------CIGYA 280
Query: 236 C--LIGIAVCCCLPCILGIL 253
++ +CCCLPCI+ +L
Sbjct: 281 MPFILCATICCCLPCIISVL 300
>gi|115462405|ref|NP_001054802.1| Os05g0179000 [Oryza sativa Japonica Group]
gi|113578353|dbj|BAF16716.1| Os05g0179000 [Oryza sativa Japonica Group]
gi|215701280|dbj|BAG92704.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218196198|gb|EEC78625.1| hypothetical protein OsI_18674 [Oryza sativa Indica Group]
gi|222630401|gb|EEE62533.1| hypothetical protein OsJ_17331 [Oryza sativa Japonica Group]
Length = 407
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 85/192 (44%), Gaps = 39/192 (20%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQC---LFHVFCVSLEFKRRR 141
I ++++ N+ +I A VL VS NE P PL ++GY + C L H++ L
Sbjct: 99 ISVELVVNVSQIIAAICVLSVSRNEHPHSPLFEWVIGYTVGCTATLPHLYWRYLHRNLPT 158
Query: 142 RGE------------------GVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESA 183
G+ GV + VS ++ TV RF + A + + A
Sbjct: 159 TGQEPTVQNIPPNNTPEANSYGVTGTNGVSRNNEATVN----PRFQ-----AFADHFKMA 209
Query: 184 NTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC--LIGIA 241
+W++VG W+ G + +P LY LC+ FL F C+G A ++
Sbjct: 210 LDCFFAVWFVVGNVWVFG-GHSSAHDAPNLYRLCIAFLTFS------CIGYAMPFILCAL 262
Query: 242 VCCCLPCILGIL 253
+CCCLPCI+ IL
Sbjct: 263 ICCCLPCIISIL 274
>gi|449442204|ref|XP_004138872.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
sativus]
gi|449499624|ref|XP_004160867.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
sativus]
Length = 424
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 85/197 (43%), Gaps = 36/197 (18%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGE 144
I +++L + +I A VL +S NEKP PL IVGYA C + + ++ R +
Sbjct: 109 ISIELLLTMSQIIAAIIVLSLSKNEKPRAPLFAWIVGYASGCGATLPLLYWRYRHRNQAS 168
Query: 145 GV-------------VFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESA-------- 183
V S S S G+E + S + SA
Sbjct: 169 EQDSLQSSQSSSRINVPAGPFSLSVSRASEGEELQHPAPSPRGSQGSGVLSARLKVLVEY 228
Query: 184 -----NTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC-- 236
+ F + +W++VG WI G + S +P LY LC+ FL F C+G A
Sbjct: 229 FKMGLDCFFA-VWFVVGNVWIFG-GHSSASEAPNLYRLCIVFLTFS------CIGYAMPF 280
Query: 237 LIGIAVCCCLPCILGIL 253
++ + +CCCLPCI+ IL
Sbjct: 281 ILCVTICCCLPCIISIL 297
>gi|297842825|ref|XP_002889294.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297335135|gb|EFH65553.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 401
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 107/271 (39%), Gaps = 68/271 (25%)
Query: 18 HSLPDHLIRSRRLLRRPPPPL-RGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQS 76
H + + S L P PP R ++R RR + R L
Sbjct: 51 HQGEEETVSSSTLTAHPAPPQQRPTSSRNARRTTSTRSPLN-----------------SG 93
Query: 77 YWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLE 136
W I ++++ + ++ A V+ ++ +E PE PL ++GY C+ + +
Sbjct: 94 LW------ISVELVVTVAQIVAAIVVMVLAKDEHPEAPLFTWVIGYTSGCIATLPILYWR 147
Query: 137 FKRRRRGEGVVF----------GDSVSGSSSTTV-----TGDEEERFHGENDSSVAKNLE 181
F+ RG G ++ S S+ T DEE + + S+ +N +
Sbjct: 148 FRTYSRGTGQDSSQRLSSSSQANNNPSESTPYTAVSVAQAADEE---NSTDMSAAPRNNQ 204
Query: 182 SANTFLSFL-----------------WWIVGFYWITASGETLISCSPQLYWLCVTFLAFD 224
T + L W++VG WI G + S SP+LY LC+ FL F
Sbjct: 205 VGETLRTRLNGLVDHFKMAIDCFFAVWFVVGNVWIFG-GHSSPSDSPKLYRLCIAFLTFS 263
Query: 225 VVFVMICVGVAC--LIGIAVCCCLPCILGIL 253
C+G A ++ +CCCLPC++ +L
Sbjct: 264 ------CIGYAMPFILCATICCCLPCLISVL 288
>gi|212723166|ref|NP_001132232.1| uncharacterized LOC100193667 [Zea mays]
gi|195643062|gb|ACG40999.1| protein binding protein [Zea mays]
gi|413944656|gb|AFW77305.1| putative RING zinc finger domain superfamily protein isoform 1 [Zea
mays]
gi|413944657|gb|AFW77306.1| putative RING zinc finger domain superfamily protein isoform 2 [Zea
mays]
gi|413944658|gb|AFW77307.1| putative RING zinc finger domain superfamily protein isoform 3 [Zea
mays]
Length = 412
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 109/275 (39%), Gaps = 45/275 (16%)
Query: 11 ETSPLL---AHSLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRETA 67
++ PLL A +P H + S R R +SG P+ +
Sbjct: 15 DSHPLLMEHAIGIPRHDVASTSTPHRDNNDGMDQLPRDSESSSGTTDASYSPNAPLARRD 74
Query: 68 AEQLEERQS----YWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYA 123
+L +QS +W I +++ NL +I A VL VS NE P PL ++GY
Sbjct: 75 DNRLRRQQSLNSGFW------ISIELAVNLSQIIAAICVLSVSKNEHPHAPLFEWVIGYT 128
Query: 124 LQC---LFHVFCVSLEFKR----RRRGEGVVFGDSVSGSSSTTVTGDEEER--------- 167
+ C L H++ L+ + + + V +S SS T ++
Sbjct: 129 IGCIATLPHLYWRYLQRNQLATVQGSNQNYVPDNSFESSSFTGISPPPVSEAGVVTVSNG 188
Query: 168 -------FHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTF 220
+ A + + A +W++VG W+ G + +P LY LC+ F
Sbjct: 189 VLRNNVVITNPRAQAFADHFKMALDCFFAVWFVVGNVWVFG-GHSSAHDAPNLYRLCIAF 247
Query: 221 LAFDVVFVMICVGVAC--LIGIAVCCCLPCILGIL 253
L F C+G A ++ +CCCLPCI+ ++
Sbjct: 248 LTFS------CIGYAMPFILCALICCCLPCIISLM 276
>gi|302775586|ref|XP_002971210.1| hypothetical protein SELMODRAFT_171829 [Selaginella moellendorffii]
gi|300161192|gb|EFJ27808.1| hypothetical protein SELMODRAFT_171829 [Selaginella moellendorffii]
Length = 392
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 83/193 (43%), Gaps = 35/193 (18%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGE 144
I +++ + ++ + VL +S +EKP+ PL + + GYA CL + L + R
Sbjct: 79 ISIELTITVSQIVASIIVLSLSRDEKPQAPLSVWVAGYAAGCL---ATLPLLYWRYTHRN 135
Query: 145 GVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANT------------------- 185
G S S + E S VA N+ SA+T
Sbjct: 136 GTTQAHDQHESPSQSTPSAESLPPSPRGTSYVALNIPSASTEVVESRARVGRLVEKFKIA 195
Query: 186 ---FLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC--LIGI 240
F + +W++VG WI G + +P LY LC+ FL F C+G A ++
Sbjct: 196 LDCFFA-VWFVVGNVWIFG-GHSSSREAPNLYRLCIVFLTFS------CIGYAMPFILCA 247
Query: 241 AVCCCLPCILGIL 253
+CCCLPCI+ +L
Sbjct: 248 TICCCLPCIIALL 260
>gi|15220126|ref|NP_178156.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|12324974|gb|AAG52430.1|AC018848_1 putative RING zinc finger protein; 53384-54880 [Arabidopsis
thaliana]
gi|17065538|gb|AAL32923.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|23197724|gb|AAN15389.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|222423453|dbj|BAH19697.1| AT1G80400 [Arabidopsis thaliana]
gi|332198277|gb|AEE36398.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 407
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 88/196 (44%), Gaps = 34/196 (17%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGE 144
I ++++ + ++ A V+ ++ +E PE PL ++GY CL + + F+ R
Sbjct: 106 ISVELVVTVAQIVAAIVVMVLAKDEHPEAPLFTWVIGYTCGCLATLPILYWRFRTYNRAT 165
Query: 145 GVVFGD---SVSGSSSTT-------VTGDEEERFHGENDSSVAKNL-ESANTFLSFL--- 190
G S G+S +T +EE G + + + ES T L+ L
Sbjct: 166 GQDSSQRATSSQGNSESTPYTAVSVAQAADEENSTGVSAAPRNNQVGESLRTRLNGLVDH 225
Query: 191 -----------WWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC--L 237
W++VG WI G + S SP+LY LC+ FL F C+G A +
Sbjct: 226 FKMAIDCFFAVWFVVGNVWIFG-GHSSPSDSPKLYRLCIAFLTFS------CIGYAMPFI 278
Query: 238 IGIAVCCCLPCILGIL 253
+ +CCCLPC++ +L
Sbjct: 279 LCATICCCLPCLISVL 294
>gi|224092390|ref|XP_002309588.1| predicted protein [Populus trichocarpa]
gi|222855564|gb|EEE93111.1| predicted protein [Populus trichocarpa]
Length = 406
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 85/198 (42%), Gaps = 39/198 (19%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCL---------FHVFCVSL 135
I ++++ L ++ + VL VS +E P PL IVGYA C+ + SL
Sbjct: 109 ISVELVLTLSQIVASIVVLSVSRHEHPHAPLFAWIVGYASGCVATLPLLYWRYRYRNQSL 168
Query: 136 EFKRRRRGEGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLS------- 188
E + +G + +G S +V+ + E + S+ S N L+
Sbjct: 169 EQDSAQNHQGSAHINVPAGPFSLSVSRNSES---DDRRSATTSPRGSQNAVLNARLKVLV 225
Query: 189 -----------FLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC- 236
+W++VG WI G + +P LY LC+ FL F C+G A
Sbjct: 226 EYFKMALDCFFAVWFVVGNVWIFG-GHSSAEEAPNLYRLCIVFLTFS------CIGYAMP 278
Query: 237 -LIGIAVCCCLPCILGIL 253
++ +CCCLPCI+ +L
Sbjct: 279 FILCATICCCLPCIISVL 296
>gi|357436799|ref|XP_003588675.1| RING finger protein [Medicago truncatula]
gi|355477723|gb|AES58926.1| RING finger protein [Medicago truncatula]
Length = 403
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 79/186 (42%), Gaps = 38/186 (20%)
Query: 96 VIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGS 155
++ + VL +S NE P+ PL IVGYA C V + L F R + DS
Sbjct: 103 IVASIVVLSLSRNEHPQTPLFQWIVGYASGC---VATLPLLFWRYYNHNHLREQDSAQSR 159
Query: 156 SSTTVTGDEEERF------HGENDSSVAKNLESANTFLSF-------------------- 189
++ D F +G+ + A + S T +
Sbjct: 160 QTSPRISDPSGTFLSISRNNGDAGQAAAASSRSNQTSILMNRRMKILVEYFKISLDCFFA 219
Query: 190 LWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC--LIGIAVCCCLP 247
+W++VG WI G + + +P LY LC+ FLAF C+G A ++ +CCCLP
Sbjct: 220 VWFVVGNVWIFG-GRSSAAVAPNLYRLCIVFLAFS------CIGYAMPFILCSTICCCLP 272
Query: 248 CILGIL 253
CI+ IL
Sbjct: 273 CIISIL 278
>gi|297802754|ref|XP_002869261.1| hypothetical protein ARALYDRAFT_328473 [Arabidopsis lyrata subsp.
lyrata]
gi|297315097|gb|EFH45520.1| hypothetical protein ARALYDRAFT_328473 [Arabidopsis lyrata subsp.
lyrata]
Length = 489
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 85/194 (43%), Gaps = 32/194 (16%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCL----------FHVFCVS 134
I +++ + +I A VL +S +E P PL IVGYA C+ +H S
Sbjct: 113 ISIELFLTVGQIIAAIVVLSLSKHEHPRAPLFTWIVGYACGCVATLPLLYWRYYHSNQAS 172
Query: 135 LEFKRRRRGEGVVFGDSVSGSSSTTVTGDEEE---------RFHGENDSS----VAKNLE 181
+ + R V + S S T GD + R+ G ++ + + +
Sbjct: 173 EQDSGQHRPNLNVAAGPFAFSISRTSEGDGRQTNTTSSRVSRYPGFISAARLKVIVEYFK 232
Query: 182 SANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC--LIG 239
A +W++VG WI G + + +P LY LC+ FL F C+G A ++
Sbjct: 233 MALDCFFAVWFVVGNVWIFG-GHSSAAEAPNLYRLCLVFLTFS------CIGYAMPFILC 285
Query: 240 IAVCCCLPCILGIL 253
+CCCLPCI+ IL
Sbjct: 286 TTICCCLPCIISIL 299
>gi|22329099|ref|NP_194986.2| C3H4 type zinc finger protein [Arabidopsis thaliana]
gi|18377636|gb|AAL66968.1| unknown protein [Arabidopsis thaliana]
gi|19698907|gb|AAL91189.1| putative protein [Arabidopsis thaliana]
gi|20465641|gb|AAM20289.1| unknown protein [Arabidopsis thaliana]
gi|332660687|gb|AEE86087.1| C3H4 type zinc finger protein [Arabidopsis thaliana]
Length = 453
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 86/194 (44%), Gaps = 32/194 (16%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCL----------FHVFCVS 134
I +++ + +I A VL +S +E P PL IVGYA C+ +H S
Sbjct: 113 ISIELFLTVGQIIAAIVVLSLSKHEHPRAPLFTWIVGYACGCVATLPLLYWRYYHSNQAS 172
Query: 135 LEFKRRRRGEGVV----FGDSVSGSS-----STTVTGDEEERFHGENDSS----VAKNLE 181
+ + R V F S+S +S T T R+ G ++ + + +
Sbjct: 173 EQDSGQHRPNLNVAAGPFAFSISRTSEADGRQTNTTSSRGSRYPGFISAARLKVIVEYFK 232
Query: 182 SANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC--LIG 239
A +W++VG WI G + + +P LY LC+ FL F C+G A ++
Sbjct: 233 MALDCFFAVWFVVGNVWIFG-GHSSAAEAPNLYRLCLVFLTFS------CIGYAMPFILC 285
Query: 240 IAVCCCLPCILGIL 253
+CCCLPCI+ IL
Sbjct: 286 TTICCCLPCIISIL 299
>gi|3063710|emb|CAA18601.1| putative protein [Arabidopsis thaliana]
gi|7270164|emb|CAB79977.1| putative protein [Arabidopsis thaliana]
Length = 495
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 86/194 (44%), Gaps = 32/194 (16%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCL----------FHVFCVS 134
I +++ + +I A VL +S +E P PL IVGYA C+ +H S
Sbjct: 113 ISIELFLTVGQIIAAIVVLSLSKHEHPRAPLFTWIVGYACGCVATLPLLYWRYYHSNQAS 172
Query: 135 LEFKRRRRGEGVV----FGDSVSGSS-----STTVTGDEEERFHGENDSS----VAKNLE 181
+ + R V F S+S +S T T R+ G ++ + + +
Sbjct: 173 EQDSGQHRPNLNVAAGPFAFSISRTSEADGRQTNTTSSRGSRYPGFISAARLKVIVEYFK 232
Query: 182 SANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC--LIG 239
A +W++VG WI G + + +P LY LC+ FL F C+G A ++
Sbjct: 233 MALDCFFAVWFVVGNVWIFG-GHSSAAEAPNLYRLCLVFLTFS------CIGYAMPFILC 285
Query: 240 IAVCCCLPCILGIL 253
+CCCLPCI+ IL
Sbjct: 286 TTICCCLPCIISIL 299
>gi|115434872|ref|NP_001042194.1| Os01g0178700 [Oryza sativa Japonica Group]
gi|55296113|dbj|BAD67832.1| ATP synthetase alpha chain -like [Oryza sativa Japonica Group]
gi|55296253|dbj|BAD67994.1| ATP synthetase alpha chain -like [Oryza sativa Japonica Group]
gi|113531725|dbj|BAF04108.1| Os01g0178700 [Oryza sativa Japonica Group]
gi|215736990|dbj|BAG95919.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218187619|gb|EEC70046.1| hypothetical protein OsI_00636 [Oryza sativa Indica Group]
gi|222617849|gb|EEE53981.1| hypothetical protein OsJ_00605 [Oryza sativa Japonica Group]
Length = 405
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 42/208 (20%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGE 144
I ++++ +L +I A VL VS NE P PL ++GY + C+ + + F R R
Sbjct: 88 ISIELIVSLSQIIAAITVLSVSRNEHPHAPLAQWLIGYTIGCVATLPHLYWRFLHRNR-- 145
Query: 145 GVVFGDSVSGSSSTTVTGDEE----------ERFHGE------NDSSVAKNLE------- 181
+ S+ V+ + + HG N+ VA+
Sbjct: 146 -----QNTEQESTNQVSSERDVYEPNSYVVVSSAHGSEVVDSGNNGGVARIASPRVYALV 200
Query: 182 -----SANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC 236
+ + F + +W++VG WI G T + +P LY LC+ FLAF I +
Sbjct: 201 ACFKLALDCFFA-VWFVVGNVWIFG-GRTSLHDAPNLYRLCIVFLAFG----FIGYALPF 254
Query: 237 LIGIAVCCCLPCILGILYALTERVMYGR 264
++ +CCCLPCI+ ++ + E + + R
Sbjct: 255 ILCTMICCCLPCIISMM-GIHEDLDFNR 281
>gi|356507782|ref|XP_003522643.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 385
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 85/195 (43%), Gaps = 37/195 (18%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGE 144
I ++++ + ++ + VL +S +E P PL IVGYA C V + L + R
Sbjct: 64 ICVELVITVSQIVASVVVLSLSKHEHPHAPLIAWIVGYASGC---VATLPLLYWRYYHNR 120
Query: 145 GVVFGDSVSGS-----------SSTTVTGDEEERFHGENDSSVAKNLESA---------- 183
GV +S S S +T G E+ S+ L +A
Sbjct: 121 GVREQESSQASPRSNDPSGTLLSDSTTNGGEDAPASSRTRSNQESWLMNARLKLLVEYFK 180
Query: 184 ---NTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC--LI 238
+ F + +W++VG WI G + +P LY LCV FL F C+G A ++
Sbjct: 181 IAVDCFFA-IWFVVGNVWIFG-GHSSADQAPNLYRLCVVFLTFS------CIGYAMPFIL 232
Query: 239 GIAVCCCLPCILGIL 253
+CCCLPCI+ IL
Sbjct: 233 CATICCCLPCIISIL 247
>gi|242087091|ref|XP_002439378.1| hypothetical protein SORBIDRAFT_09g005450 [Sorghum bicolor]
gi|241944663|gb|EES17808.1| hypothetical protein SORBIDRAFT_09g005450 [Sorghum bicolor]
Length = 410
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 109/275 (39%), Gaps = 45/275 (16%)
Query: 11 ETSPLLAH---SLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRETA 67
++ PLL +P + S RR R +SG P+ +
Sbjct: 15 DSHPLLMEHVIGIPRDDVASTSTPRRDNNDGMDHLPRDSESSSGTTAAYNSPNTPIARRD 74
Query: 68 AEQLEERQS----YWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYA 123
+ +QS +W I +++ NL +I A VL VS NE P PL ++GY
Sbjct: 75 DNRRRRQQSLNSGFW------ISIELAVNLSQIIAAICVLSVSRNEHPHAPLFEWVIGYT 128
Query: 124 LQC---LFHVFCVSLEFKR----RRRGEGVVFGDSVSGSSSTTVTGDEEER------FHG 170
+ C L H++ L+ + + + V +S +S T ++ +G
Sbjct: 129 IGCIATLPHLYWRYLQRNQLPTVQGSNQNYVPDNSFESNSFTGISPPHVSEAGVVTVTNG 188
Query: 171 ENDSSVAKNLESANTFLSF----------LWWIVGFYWITASGETLISCSPQLYWLCVTF 220
+ ++ A F +W++VG W+ G + +P LY LC+ F
Sbjct: 189 VSRNNTVTTNPRAQAFADHFKMALDCFFAVWFVVGNVWVFG-GHSSSHDAPNLYRLCIAF 247
Query: 221 LAFDVVFVMICVGVAC--LIGIAVCCCLPCILGIL 253
L F C+G A ++ +CCCLPCI+ ++
Sbjct: 248 LTFS------CIGYAMPFILCALICCCLPCIISLM 276
>gi|357134414|ref|XP_003568812.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Brachypodium
distachyon]
Length = 419
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 108/260 (41%), Gaps = 56/260 (21%)
Query: 22 DHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYS 81
D L R+ L+ P A L RR R VR +Q S W
Sbjct: 56 DRLPRNSENLQETTTPSNSQNAPLARRGDNR----------VRR---QQSPLNSSCW--- 99
Query: 82 RPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRR 141
I ++++ + +I A +VL +S NE P PL ++GY + C+ + + + R
Sbjct: 100 ---ISVELIVTVSQIIAAISVLSLSRNEHPHAPLFEWVIGYTVGCIATLPLLYWRYIHRN 156
Query: 142 R-------------GEGVVFGDSVSGSSSTTVTGDEEERFHGEN----DSSVAKN---LE 181
R + +S + SS++ ++ E G N ++++ +N
Sbjct: 157 RLTTGQESASQNFPPNSIPEANSFTESSASRIS--EAGHVTGTNGVSQNNTITRNPRVQA 214
Query: 182 SANTFLSFL------WWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVA 235
A+ F L W++VG WI G + +P LY LC+ FL F C+G A
Sbjct: 215 YADHFRMALDCFFAVWFVVGNVWIFG-GHSSSHDAPNLYRLCIAFLTFS------CIGYA 267
Query: 236 C--LIGIAVCCCLPCILGIL 253
++ +CCCLPCI+ ++
Sbjct: 268 MPFILCALICCCLPCIISLM 287
>gi|168025496|ref|XP_001765270.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683589|gb|EDQ69998.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 300
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 78/172 (45%), Gaps = 21/172 (12%)
Query: 96 VIVAFAVLGVSINEKPEVPLRLRIVGYALQCL----------FHVFCVSLEFKRRRRGEG 145
+I + VL +S NE P+ PL + + GYA CL H + + E E
Sbjct: 24 IIASIIVLVLSRNEHPQAPLHVWVAGYAAGCLATLPLLYWRYTHQYMRTREPASTSASEP 83
Query: 146 VVFGDSVSGSSSTTVT-GDEEERFHGEND-SSVAKNLESANTFLSFLWWIVGFYWITASG 203
V GSS T+T G ++ HG S V + + A +W++VG WI G
Sbjct: 84 NPSSGGVGGSSYVTLTPGSRDDMAHGSRQRSGVGQVFKIALDCFFAIWFVVGNVWIFG-G 142
Query: 204 ETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC--LIGIAVCCCLPCILGIL 253
+ +P LY LC+ L F C+G A ++ +CCCLPCI+ +L
Sbjct: 143 HSAAHDAPNLYRLCIVLLTFS------CIGYAMPFILCATICCCLPCIIALL 188
>gi|168025500|ref|XP_001765272.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683591|gb|EDQ70000.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 304
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 78/172 (45%), Gaps = 21/172 (12%)
Query: 96 VIVAFAVLGVSINEKPEVPLRLRIVGYALQCL----------FHVFCVSLEFKRRRRGEG 145
+I + VL +S NE P+ PL + + GYA CL H + + E E
Sbjct: 24 IIASIIVLVLSRNEHPQAPLHVWVAGYAAGCLATLPLLYWRYTHQYMRTREPASTSASEP 83
Query: 146 VVFGDSVSGSSSTTVT-GDEEERFHGEND-SSVAKNLESANTFLSFLWWIVGFYWITASG 203
V GSS T+T G ++ HG S V + + A +W++VG WI G
Sbjct: 84 NPSSGGVGGSSYVTLTPGSRDDMAHGSRQRSGVGQVFKIALDCFFAIWFVVGNVWIFG-G 142
Query: 204 ETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC--LIGIAVCCCLPCILGIL 253
+ +P LY LC+ L F C+G A ++ +CCCLPCI+ +L
Sbjct: 143 HSAAHDAPNLYRLCIVLLTFS------CIGYAMPFILCATICCCLPCIIALL 188
>gi|356518268|ref|XP_003527801.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 386
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 87/193 (45%), Gaps = 34/193 (17%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCL---------FHVFCVSL 135
I ++++ + ++ + VL +S +E P PL IVG+A C+ ++ C+
Sbjct: 66 ICVELVITVSQIVASVVVLSLSKHEHPRAPLFAWIVGFASGCVATLPLLYWRYYHNCLVR 125
Query: 136 EFKRRRRGEGVVFGDSVSG---SSSTTVTGDEEERFHGENDSSVAKNLE----------S 182
E + + + + SG S STT G++ N S N +
Sbjct: 126 ELESSSQAS--LRSNDPSGTLLSDSTTNGGEDVPASSRSNQESWLMNARLKLLVEYFKIA 183
Query: 183 ANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC--LIGI 240
+ F + +W+IVG WI G + +P LY LCV FL F C+G A ++
Sbjct: 184 VDCFFA-IWFIVGNVWIFG-GHSSADQAPNLYRLCVVFLTFS------CIGYAMPFILCA 235
Query: 241 AVCCCLPCILGIL 253
+CCCLPCI+ IL
Sbjct: 236 TICCCLPCIISIL 248
>gi|255551132|ref|XP_002516614.1| ring finger protein, putative [Ricinus communis]
gi|223544434|gb|EEF45955.1| ring finger protein, putative [Ricinus communis]
Length = 437
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 85/195 (43%), Gaps = 33/195 (16%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRR-- 142
I ++++ + +I + VL +S +E P PL IVGYA C+ + + ++ R +
Sbjct: 110 ISVELVLTVSQIIASIVVLSLSRHEHPRAPLFAWIVGYASGCVATLPLLYWRYRHRNQVT 169
Query: 143 ----------GEGVVFGDSVS-----GSSSTTVTGDEEERFHGENDSSVAKNLESANTFL 187
V GDS+S S G+N ++ L++ +
Sbjct: 170 EQEAAQPRQSSHFSVPGDSISISITRNSEVVDRRSSSTSSRGGQNSGALNARLKTLVEYF 229
Query: 188 SF-------LWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC--LI 238
+W++VG WI G + + +P +Y LC+ FL F C+G A ++
Sbjct: 230 KMALDCFFAVWFVVGNVWIFG-GHSSATEAPNMYRLCIVFLTFS------CIGYAMPFIL 282
Query: 239 GIAVCCCLPCILGIL 253
+CCCLPCI+ +L
Sbjct: 283 CATICCCLPCIISLL 297
>gi|222641326|gb|EEE69458.1| hypothetical protein OsJ_28860 [Oryza sativa Japonica Group]
Length = 616
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 85/205 (41%), Gaps = 31/205 (15%)
Query: 74 RQSYWAYSRPI------IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCL 127
R S + + R I I +++ +V ++ A VL S +E P PL I+GY + C+
Sbjct: 250 RDSMYGHGRSIWNSGLWISFELVIYVVQIVAAIFVLVFSRDEHPHAPLFAWIIGYTIGCI 309
Query: 128 FHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVTGDEEERFHGEND-------------- 173
+ + R R + + T + E R +
Sbjct: 310 ASIPLICWRCAHRNRPSEQEPEQPPAAYPNLTSSQSSEGRNQRSSGTVLHFGCITISCPR 369
Query: 174 -SSVAKNLESANTFLSFLWWIVGFYWITASGETLISC--SPQLYWLCVTFLAFDVVFVMI 230
S +A + ++A +W++VG WI TL +P +Y LC+ FLA
Sbjct: 370 PSILAYHFKTAVDCFFAVWFVVGNVWIFGGHSTLSDSQEAPNMYRLCLAFLALS------ 423
Query: 231 CVGVAC--LIGIAVCCCLPCILGIL 253
CVG A ++ A+CCC PC++ +L
Sbjct: 424 CVGYAIPFVMCAAICCCFPCLISLL 448
>gi|224143048|ref|XP_002324833.1| predicted protein [Populus trichocarpa]
gi|222866267|gb|EEF03398.1| predicted protein [Populus trichocarpa]
Length = 434
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 85/201 (42%), Gaps = 43/201 (21%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCL---------FHVFCVSL 135
I ++++ L +I + VL VS E P PL IVGYA C+ + +L
Sbjct: 107 ISVELVLTLSQIIASIVVLSVSRKEHPRAPLFAWIVGYASGCVATLPLLYWRYSHRNQAL 166
Query: 136 EFKRRRRGEGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESA-NTFLSF----- 189
E + +G + +G S +V+ + E GE+ S + N L+
Sbjct: 167 EQDSAQNHQGSAHINVPAGPFSLSVSRNSE----GEDRRSATTSPRGGQNAVLNARYELK 222
Query: 190 ---------------LWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGV 234
+W++VG WI S + +P LY LC+ FL F C+G
Sbjct: 223 VLLEYFKMALDCFFAVWFVVGNVWIFGSHSSAEE-APNLYRLCIVFLTFS------CIGY 275
Query: 235 AC--LIGIAVCCCLPCILGIL 253
A ++ +CCCLPCI+ IL
Sbjct: 276 AMPFILCATICCCLPCIISIL 296
>gi|302756339|ref|XP_002961593.1| hypothetical protein SELMODRAFT_76977 [Selaginella moellendorffii]
gi|300170252|gb|EFJ36853.1| hypothetical protein SELMODRAFT_76977 [Selaginella moellendorffii]
Length = 403
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 83/204 (40%), Gaps = 46/204 (22%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGE 144
I +++ + ++ + VL +S +EKP+ PL + + GYA CL + + + R
Sbjct: 79 ISIELTITVSQIVASIIVLSLSRDEKPQAPLSVWVAGYAAGCLATLPLLYWRYTHRN--- 135
Query: 145 GVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANT------------------- 185
G S S + E S VA N+ SA+T
Sbjct: 136 GTTQAHDQHESPSQSTPSAESLPPSPRGTSYVALNIPSASTEVVEPRARSRGRDVDSASD 195
Query: 186 --------------FLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMIC 231
F + +W++VG WI G + +P LY LC+ FL F C
Sbjct: 196 NSGLVEKFKIALDCFFA-VWFVVGNVWIFG-GHSSSREAPNLYRLCIVFLTFS------C 247
Query: 232 VGVAC--LIGIAVCCCLPCILGIL 253
+G A ++ +CCCLPCI+ +L
Sbjct: 248 IGYAMPFILCATICCCLPCIIALL 271
>gi|296089966|emb|CBI39785.3| unnamed protein product [Vitis vinifera]
Length = 343
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 83/170 (48%), Gaps = 15/170 (8%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGE 144
++L+ + +V + V L VS E+P P+R+ IVGY C+ + + ++R +
Sbjct: 90 MILEFIALVVQIGVITFTLSVSKAERPVWPMRIWIVGYDFGCVLSLLLLYWRYQRPYSAQ 149
Query: 145 GVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSF-LWWIVGFYWITASG 203
G F ++ E++R + E+ SS N + L F +W+++G W+ S
Sbjct: 150 GDGF----------SLPDIEQQRNNEESRSSHLMNKCRTSLELFFAIWFVMGNVWVFDSR 199
Query: 204 ETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGIL 253
+P+L+ LC+T LA++ I L+ + +CCC+P + +L
Sbjct: 200 FGSFHRAPKLHVLCITLLAWNA----ISYSFPFLLFVLLCCCVPLVSNLL 245
>gi|147819085|emb|CAN74282.1| hypothetical protein VITISV_016708 [Vitis vinifera]
Length = 343
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 84/174 (48%), Gaps = 15/174 (8%)
Query: 81 SRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRR 140
S ++L+ + +V + V L VS E+P P+R+ IVGY C+ + + ++R
Sbjct: 86 SNTWMILEFIALVVQIGVITFTLSVSKAERPVWPMRIWIVGYDFGCVLSLLLLYWRYQRP 145
Query: 141 RRGEGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSF-LWWIVGFYWI 199
+G F ++ E++R + E+ SS N + L F +W+++G W+
Sbjct: 146 YSAQGDGF----------SLPDIEQQRNNEESRSSHLMNKCRTSLELFFAIWFVMGNVWV 195
Query: 200 TASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGIL 253
S +P+L+ LC+T LA++ I L+ + +CCC+P + +L
Sbjct: 196 FDSRFGSFHRAPKLHVLCITLLAWNA----ISYSFPFLLFVLLCCCVPLVSNLL 245
>gi|359494331|ref|XP_002267586.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680 [Vitis vinifera]
Length = 312
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 83/170 (48%), Gaps = 15/170 (8%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGE 144
++L+ + +V + V L VS E+P P+R+ IVGY C+ + + ++R +
Sbjct: 59 MILEFIALVVQIGVITFTLSVSKAERPVWPMRIWIVGYDFGCVLSLLLLYWRYQRPYSAQ 118
Query: 145 GVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSF-LWWIVGFYWITASG 203
G F ++ E++R + E+ SS N + L F +W+++G W+ S
Sbjct: 119 GDGF----------SLPDIEQQRNNEESRSSHLMNKCRTSLELFFAIWFVMGNVWVFDSR 168
Query: 204 ETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGIL 253
+P+L+ LC+T LA++ I L+ + +CCC+P + +L
Sbjct: 169 FGSFHRAPKLHVLCITLLAWNA----ISYSFPFLLFVLLCCCVPLVSNLL 214
>gi|115478553|ref|NP_001062870.1| Os09g0323100 [Oryza sativa Japonica Group]
gi|48716984|dbj|BAD23676.1| putative RING zinc finger protein [Oryza sativa Japonica Group]
gi|113631103|dbj|BAF24784.1| Os09g0323100 [Oryza sativa Japonica Group]
gi|215767689|dbj|BAG99917.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218201929|gb|EEC84356.1| hypothetical protein OsI_30879 [Oryza sativa Indica Group]
gi|347737076|gb|AEP20519.1| zinc finger protein [Oryza sativa Japonica Group]
Length = 414
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 85/205 (41%), Gaps = 31/205 (15%)
Query: 74 RQSYWAYSRPI------IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCL 127
R S + + R I I +++ +V ++ A VL S +E P PL I+GY + C+
Sbjct: 74 RDSMYGHGRSIWNSGLWISFELVIYVVQIVAAIFVLVFSRDEHPHAPLFAWIIGYTIGCI 133
Query: 128 FHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVTGDEEERFHGEND-------------- 173
+ + R R + + T + E R +
Sbjct: 134 ASIPLICWRCAHRNRPSEQEPEQPPAAYPNLTSSQSSEGRNQRSSGTVLHFGCITISCPR 193
Query: 174 -SSVAKNLESANTFLSFLWWIVGFYWITASGETLISC--SPQLYWLCVTFLAFDVVFVMI 230
S +A + ++A +W++VG WI TL +P +Y LC+ FLA
Sbjct: 194 PSILAYHFKTAVDCFFAVWFVVGNVWIFGGHSTLSDSQEAPNMYRLCLAFLALS------ 247
Query: 231 CVGVAC--LIGIAVCCCLPCILGIL 253
CVG A ++ A+CCC PC++ +L
Sbjct: 248 CVGYAIPFVMCAAICCCFPCLISLL 272
>gi|255635776|gb|ACU18237.1| unknown [Glycine max]
Length = 365
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 80/169 (47%), Gaps = 13/169 (7%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGE 144
++L+ + ++ + + L +S E+P P+R+ + GY + C+ ++ L R R
Sbjct: 86 MMLEFIALILQITITTFTLAISKRERPIWPMRIWVSGYDIGCVLNL----LLLYGRYRQI 141
Query: 145 GVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGE 204
+ GDS+S S +EE R S + ++ +W+++G W+ S
Sbjct: 142 YLTQGDSLSLSDIEQQRNNEETRM-----SHLMNKCRTSLELFFAIWFVMGNVWVFDSRF 196
Query: 205 TLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGIL 253
+P+L+ LC+ LA++ +C L+ + +CCC+P I +L
Sbjct: 197 GSFHHAPKLHVLCIILLAWNA----MCYSFPFLLFVLLCCCVPLISTLL 241
>gi|326505380|dbj|BAJ95361.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 420
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 85/196 (43%), Gaps = 35/196 (17%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRR-- 142
I ++++ + +I A VL +S E P PL ++GY + C+ + + + R R
Sbjct: 100 ISIELVVTVSQIIAAICVLSLSRKEHPHSPLFEWVIGYTVGCVATLPLLYWRYLHRNRPT 159
Query: 143 -----GEGVVFGDSVSGSSSTTVT---GDEEERFHGENDSSVAKNLESAN---------- 184
+S+ S+S T + G E F E + N+ + N
Sbjct: 160 TGQEPASQNFPPNSIPESNSHTTSSAPGMSEAGFVTETNGVSQNNMLTRNPRAQVYADHF 219
Query: 185 -----TFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC--L 237
F + +W++VG W+ G + +P LY LC+ FL F C+G A +
Sbjct: 220 RMALDCFFA-VWFVVGNVWVFG-GHSSAHDAPNLYRLCIAFLTFS------CIGYAMPFI 271
Query: 238 IGIAVCCCLPCILGIL 253
+ +CCCLPCI+ ++
Sbjct: 272 LCALICCCLPCIISLM 287
>gi|356554344|ref|XP_003545507.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 440
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 98/245 (40%), Gaps = 46/245 (18%)
Query: 47 RRASGRRLMLREPSVRVRETAAEQL-----------EERQSYWAYSRPIIVLDVLWNLVF 95
R SG R+ L +PSV + R +S I ++++ L
Sbjct: 66 ERISGARMPLSQPSVSATSVSNGSNSRNSSFIRRGDTRRNRSPVHSGLWISIELVLLLSQ 125
Query: 96 VIVAFAVLGVSINEKPEVPLRLRIVGYALQC-----------LFHVFCVSLEFKRRRRGE 144
++ + VL +S +E P PL I+GYA C H E + R+
Sbjct: 126 IVASIIVLSLSRHEHPRTPLFQWIIGYASGCAATLPLLYWRYYHHNHMQEQESSQSRQTS 185
Query: 145 GVVFGDSVSGSSSTTVTGDEEERF----HGENDSSVAKNLE----------SANTFLSFL 190
+ S + S+ G E+ + N S+ N S + F + +
Sbjct: 186 PRINDPSGTLLFSSRTNGGEDGQSAVASSRSNQPSLLMNRRMKTLVEYFKISLDCFFA-V 244
Query: 191 WWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC--LIGIAVCCCLPC 248
W++VG WI G + + +P LY LC+ FLAF C+G A + +CCCLPC
Sbjct: 245 WFVVGNVWIFG-GHSSANEAPNLYRLCIVFLAFS------CIGYAMPFIFCSTICCCLPC 297
Query: 249 ILGIL 253
I+ IL
Sbjct: 298 IISIL 302
>gi|242048934|ref|XP_002462211.1| hypothetical protein SORBIDRAFT_02g021790 [Sorghum bicolor]
gi|241925588|gb|EER98732.1| hypothetical protein SORBIDRAFT_02g021790 [Sorghum bicolor]
Length = 415
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 81/188 (43%), Gaps = 25/188 (13%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGE 144
I +V+ + V+ A +L S +E P PL I+GY + C+ + + + R R
Sbjct: 91 ISFEVVMYIAQVVAAIVILVFSRHEHPHAPLFAWIIGYTVGCIASLPLIYWRYVHRNRHL 150
Query: 145 GVVFGDSVSGSSSTTVTGDEEERFHGEND---------------SSVAKNLESANTFLSF 189
+ + T + E R H + S +A + ++A
Sbjct: 151 DQEPQQPPTTYPTLTPSQSSEGRNHRTSGIVLRLGCIAISCPRLSVLAYHFKTAVDCFFA 210
Query: 190 LWWIVGFYWITA--SGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC--LIGIAVCCC 245
+W++VG WI S + +P +Y LC+ FLA + CVG A ++ A+CCC
Sbjct: 211 VWFVVGNVWIFGGRSISSDAQDAPNMYRLCLAFLA------LSCVGYAIPFIMCAAICCC 264
Query: 246 LPCILGIL 253
PC++ +L
Sbjct: 265 FPCLISVL 272
>gi|413947493|gb|AFW80142.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 459
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 46 LRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGV 105
L R SGRR PS+ V E AA QL+ R+ WA+SRP++ LD+ WN+ F A A+L
Sbjct: 106 LPRTSGRR----GPSMLVHEMAALQLQRRRVDWAHSRPVLALDIAWNVAFTAAAAAMLSS 161
Query: 106 SINEKPEVPLRL 117
S E P PL L
Sbjct: 162 SAEESPIKPLHL 173
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%)
Query: 67 AAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRL 117
AA QL+ R+ WA+SRP++ LD+ WN+ F A A+L S E P PL L
Sbjct: 2 AALQLQRRRVDWAHSRPVLALDIAWNVAFAATAAAMLSSSAEESPIKPLHL 52
>gi|356561942|ref|XP_003549235.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 441
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 81/184 (44%), Gaps = 33/184 (17%)
Query: 96 VIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFG------ 149
++ + VL +S +E P PL I+GYA C + + +
Sbjct: 127 IVASIIVLSLSRHEHPRTPLFHWIIGYASGCAATLPLLYWRYYHHNHMREQDSSQSRQSS 186
Query: 150 ---DSVSGS---SSTTVTGDEEERFHGENDSSVAKNLES--ANTFLSF----------LW 191
+ SG+ SS T +G++ + + S+ A L + T + + +W
Sbjct: 187 PRINDPSGTLLFSSRTNSGEDGQAAVASSRSNQASLLMNRRMKTLVEYFKISLDCFFAVW 246
Query: 192 WIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC--LIGIAVCCCLPCI 249
++VG WI G + + +P LY LC+ FLAF C+G A ++ +CCCLPCI
Sbjct: 247 FVVGNVWIFG-GHSSVEEAPNLYRLCIVFLAFS------CIGYAMPFILCSTICCCLPCI 299
Query: 250 LGIL 253
+ IL
Sbjct: 300 ISIL 303
>gi|414885026|tpg|DAA61040.1| TPA: putative RING zinc finger domain superfamily protein isoform 1
[Zea mays]
gi|414885027|tpg|DAA61041.1| TPA: putative RING zinc finger domain superfamily protein isoform 2
[Zea mays]
Length = 414
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 81/189 (42%), Gaps = 27/189 (14%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGE 144
I +++ + V+ A +L S +E P PL I+GY L C+ + + + R R
Sbjct: 90 ISFEIVMYIAQVVAAIVILIFSRHEHPHAPLFAWIIGYTLGCIASLPLIYWRYVHRNRHL 149
Query: 145 GVVFGDSVSGSSSTTVTGDEEERFHGEND---------------SSVAKNLESANTFLSF 189
+ + T + E R H + S +A + ++
Sbjct: 150 DQEPQQPPTTYPTLTPSQSSEGRNHRTSGIVLHLGCISISCPRLSVLAYHFKTGVDCFFA 209
Query: 190 LWWIVGFYWITASGETLISCS---PQLYWLCVTFLAFDVVFVMICVGVAC--LIGIAVCC 244
+W++VG WI G ++ S + P +Y LC+ FLA CVG A ++ A+CC
Sbjct: 210 VWFVVGNVWIFG-GRSISSDAQDAPNMYRLCLAFLALS------CVGYAIPFIMCAAICC 262
Query: 245 CLPCILGIL 253
C PC++ +L
Sbjct: 263 CFPCLISVL 271
>gi|293336813|ref|NP_001170128.1| uncharacterized LOC100384053 [Zea mays]
gi|224033719|gb|ACN35935.1| unknown [Zea mays]
gi|414876051|tpg|DAA53182.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 410
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 111/272 (40%), Gaps = 48/272 (17%)
Query: 10 AETSPLLAHSLPDHLIRSRRLLRR-PPPPLRGAAARLLRRASGRRLMLREPSVRVRETAA 68
A TS HS D L RSR P P + + + S R+
Sbjct: 24 ASTSHQDDHSGSDELHRSRGPSNEVSPSPDTSSGTNDVSNSHNAS------SARIDRGHR 77
Query: 69 EQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQC-- 126
+Q +W I ++++ NL ++ A VL VS NE P+ PL ++GY + C
Sbjct: 78 QQNPLNSGFW------ISIELIVNLSQIVAAVVVLSVSRNEHPQAPLFTWLLGYTIGCIA 131
Query: 127 -LFHVFCVSLEFKR--------RRRGEGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVA 177
L H++ L R +R G+ S S + + E G N + V+
Sbjct: 132 ILPHLYWRYLHRNRLDMEQEMPPQRSPGMNI--SEINSYAVVSSPHASEAVEGANSTGVS 189
Query: 178 K-NLESA---------------NTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFL 221
+ NL A + F + +W++VG W+ S + +P LY +C+ FL
Sbjct: 190 RTNLPMASPRFYAMVACFKLVLDCFFA-VWFVVGNVWMFGSRSSAHD-APNLYRICLVFL 247
Query: 222 AFDVVFVMICVGVACLIGIAVCCCLPCILGIL 253
AF I + ++ +CCCLPCI+ +L
Sbjct: 248 AFG----FIGYALPFILCTMICCCLPCIISVL 275
>gi|226500896|ref|NP_001146330.1| uncharacterized protein LOC100279906 [Zea mays]
gi|219886659|gb|ACL53704.1| unknown [Zea mays]
Length = 414
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 80/189 (42%), Gaps = 27/189 (14%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGE 144
I +++ + V+ A +L S +E P PL I+GY L C+ + + + R R
Sbjct: 90 ISFEIVMYIAQVVAAIVILIFSRHEHPHAPLFAWIIGYTLGCIASLPLIYWRYVHRNRHL 149
Query: 145 GVVFGDSVSGSSSTTVTGDEEERFHGEND---------------SSVAKNLESANTFLSF 189
+ + + E R H + S +A + ++
Sbjct: 150 DQEPQQPPTTYPTLIPSQSSEGRNHRTSGIVLHLGCISISCPRLSVLAYHFKTGVDCFFA 209
Query: 190 LWWIVGFYWITASGETLISCS---PQLYWLCVTFLAFDVVFVMICVGVAC--LIGIAVCC 244
+W++VG WI G ++ S + P +Y LC+ FLA CVG A ++ A+CC
Sbjct: 210 VWFVVGNVWIFG-GRSISSDAQDAPNMYRLCLAFLALS------CVGYAIPFIMCAAICC 262
Query: 245 CLPCILGIL 253
C PC++ +L
Sbjct: 263 CFPCLISVL 271
>gi|296434051|dbj|BAJ07983.1| RING finger family protein [Silene latifolia]
Length = 434
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 90/205 (43%), Gaps = 37/205 (18%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRG- 143
I +++ + L +I + VL +S +E P+ PL +VGY C+ + + F R RG
Sbjct: 107 ISIELAFTLTQIIASTIVLCLSRHEHPQAPLFAWVVGYTAGCVASLPVMYWRFIHRNRGS 166
Query: 144 EGVV-------FGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLE--SANTFLSFLW--- 191
E VV +S S +S H + S + + E +ANT + +
Sbjct: 167 EAVVQVNQASPHANSASDQNSYVTISLSRSLEHEDRQSVPSSSNEGLTANTRMGLIMDHF 226
Query: 192 -----------WIVGFYWITASGETLISCSPQLY---------WLCVTFLAFDVVFVMI- 230
++VG WI G +S +P LY L ++F + +V++ +
Sbjct: 227 KTALDCFFGVLFVVGNVWIFG-GHASVSDAPNLYRYFLNPDVKTLQISFESLCIVYLTLS 285
Query: 231 CVGVAC--LIGIAVCCCLPCILGIL 253
C+ A ++ +CCCLPCI+ +L
Sbjct: 286 CINYAMPFILCAMICCCLPCIISVL 310
>gi|326517741|dbj|BAK03789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 413
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 77/187 (41%), Gaps = 24/187 (12%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGE 144
I + + + + A +L +S +E P PL I+GY + C + V + R R
Sbjct: 90 ISFEFVMYVAQITAAIVILILSRHELPHAPLVAWIIGYTVGCTASLPLVYWRYVHRNRPS 149
Query: 145 GVVFGDSVSGSSSTTVTGDE--EERFHGE------------NDSSVAKNLESANTFLSFL 190
+ + T + E +R G S +A + ++A +
Sbjct: 150 EEEPEQPPTTYPTLTSSSSEGRNQRTSGSVLHLGCITIACPRPSILAYHSKTAVDCFFAI 209
Query: 191 WWIVGFYWITASGETLISC--SPQLYWLCVTFLAFDVVFVMICVGVAC--LIGIAVCCCL 246
W++VG WI T +P +Y LC+ FLA CVG A ++ A+CCC
Sbjct: 210 WFVVGNVWIFGGRGTSSDAQDAPNMYRLCLAFLALS------CVGYAIPFIMCAAICCCF 263
Query: 247 PCILGIL 253
PC++ +L
Sbjct: 264 PCLISVL 270
>gi|18423810|ref|NP_568834.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|30696669|ref|NP_851197.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|21553392|gb|AAM62485.1| unknown [Arabidopsis thaliana]
gi|332009321|gb|AED96704.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332009322|gb|AED96705.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 343
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 14/137 (10%)
Query: 93 LVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSV 152
LV + V L +S E+P P+RL I GY + CL ++ + +++ +G F
Sbjct: 100 LVQLTVITFTLAISKEERPIWPVRLWITGYDVGCLLNLMLLYGRYRQLDINQGNGF---- 155
Query: 153 SGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSF---LWWIVGFYWITASGETLISC 209
V GD E++ G ++ + + T L +W+++G W+ S
Sbjct: 156 -------VLGDVEQQQRGREETRSSHLMNKCRTSLELFFAIWFVIGNVWVFDSRFGSFHH 208
Query: 210 SPQLYWLCVTFLAFDVV 226
+P+L+ LCV+ LA++ +
Sbjct: 209 APKLHVLCVSLLAWNAI 225
>gi|20804599|dbj|BAB92290.1| RING zinc finger protein-like [Oryza sativa Japonica Group]
gi|125571727|gb|EAZ13242.1| hypothetical protein OsJ_03165 [Oryza sativa Japonica Group]
gi|215712224|dbj|BAG94351.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 304
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 18/136 (13%)
Query: 96 VIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGS 155
++V AV+ S E+P PLR+ + Y + +V + L + R R S SG+
Sbjct: 71 MVVTTAVVATSPKERPAWPLRVWVAAYNVG---NVLSLPLLYWRHRH--------SSSGA 119
Query: 156 SSTTVTGDEEERFHGENDSSVAKN--LESANTFLSF---LWWIVGFYWITASGETLISCS 210
T++ D E HG ND ++ + A FL +W+++G W+ + +
Sbjct: 120 RGGTLSDDPE--MHGANDPLRNRSYLMNKARAFLELFFAMWFVMGNVWVFDARLGSFHRA 177
Query: 211 PQLYWLCVTFLAFDVV 226
P+LY LC+ LA++ V
Sbjct: 178 PRLYALCIGLLAWNAV 193
>gi|147859662|emb|CAN81037.1| hypothetical protein VITISV_017962 [Vitis vinifera]
Length = 547
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 9/66 (13%)
Query: 190 LWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC--LIGIAVCCCLP 247
+W++VG WI G + S +P LY LC+ FL F C+G A ++ +CCCLP
Sbjct: 355 VWFVVGNVWIFG-GHSSSSEAPNLYRLCIVFLTFS------CIGYAMPFILCATICCCLP 407
Query: 248 CILGIL 253
CI+ IL
Sbjct: 408 CIISIL 413
>gi|125527404|gb|EAY75518.1| hypothetical protein OsI_03422 [Oryza sativa Indica Group]
Length = 304
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 18/136 (13%)
Query: 96 VIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGS 155
++V AV+ S E+P PLR+ + Y + +V + L + R R S SG+
Sbjct: 71 MVVTTAVVATSPKERPAWPLRVWVAAYNVG---NVLSLPLLYWRHRH--------SSSGA 119
Query: 156 SSTTVTGDEEERFHGENDSSVAKN--LESANTFLSF---LWWIVGFYWITASGETLISCS 210
T++ D E HG ND ++ + A FL +W+++G W+ + +
Sbjct: 120 RGGTLSDDPE--MHGANDPLRNRSYLMNKARAFLELFFAMWFVMGNVWVFDARLGSFHRA 177
Query: 211 PQLYWLCVTFLAFDVV 226
P+LY LC+ LA++ V
Sbjct: 178 PRLYALCIGLLAWNAV 193
>gi|9758617|dbj|BAB09279.1| unnamed protein product [Arabidopsis thaliana]
Length = 320
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 14/137 (10%)
Query: 93 LVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRR--RRGEGVVFGD 150
LV + V L +S E+P P+RL I GY + CL ++ + +++ +G G V GD
Sbjct: 100 LVQLTVITFTLAISKEERPIWPVRLWITGYDVGCLLNLMLLYGRYRQLDINQGNGFVLGD 159
Query: 151 SVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSF-LWWIVGFYWITASGETLISC 209
++++R E SS N + L F +W+++G W+ S
Sbjct: 160 V-----------EQQQRGREETRSSHLMNKCRTSLELFFAIWFVIGNVWVFDSRFGSFHH 208
Query: 210 SPQLYWLCVTFLAFDVV 226
+P+L+ LCV+ LA++ +
Sbjct: 209 APKLHVLCVSLLAWNAI 225
>gi|297793071|ref|XP_002864420.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297310255|gb|EFH40679.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 343
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 14/137 (10%)
Query: 93 LVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRR--RGEGVVFGD 150
LV + V L +S E+P P+RL I GY + CL ++ + +++ +G G V GD
Sbjct: 100 LVQLTVITFTLAISKEERPIWPVRLWITGYDVGCLLNLMLLYGRYRQLDVYQGNGFVLGD 159
Query: 151 SVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSF-LWWIVGFYWITASGETLISC 209
++++R E SS N + L F +W+++G W+ S
Sbjct: 160 V-----------EQQQRGREETRSSHLMNKCRTSLELFFAIWFVIGNVWVFDSRFGSFHH 208
Query: 210 SPQLYWLCVTFLAFDVV 226
+P+L+ LCV+ L+++ +
Sbjct: 209 APKLHVLCVSLLSWNAI 225
>gi|297790029|ref|XP_002862928.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297308705|gb|EFH39187.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 213
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Query: 42 AARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRP 83
+AR L AS R+M REPS+ VRE AAEQLEERQS WAY +P
Sbjct: 85 SARFLSCASSGRVM-REPSMLVREAAAEQLEERQSDWAYFKP 125
>gi|449463394|ref|XP_004149419.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
sativus]
Length = 336
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 69/162 (42%), Gaps = 33/162 (20%)
Query: 102 VLGVSINEKPEVPLRLRIVGYALQCL----------FHVFCVSLEFKRRRRGEGVVFGDS 151
VL +S EKP P+RL IVGY L C+ +H++ + GE V D
Sbjct: 108 VLAISEAEKPIWPMRLWIVGYDLGCILSLLLLYGRYWHLYLM--------HGERVGLSD- 158
Query: 152 VSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSP 211
+ T H N + L A +W+++G WI S + +P
Sbjct: 159 ----TEQRRTSQASRSLHLMNKCRTSLELFFA------IWFVMGNVWIVDSRFSSFQRAP 208
Query: 212 QLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGIL 253
+L+ LCV L ++ IC ++ + +CCC+P + +L
Sbjct: 209 KLHLLCVFLLVWNA----ICYSFPFILFLLLCCCVPLVSSLL 246
>gi|297820672|ref|XP_002878219.1| hypothetical protein ARALYDRAFT_907322 [Arabidopsis lyrata subsp.
lyrata]
gi|297324057|gb|EFH54478.1| hypothetical protein ARALYDRAFT_907322 [Arabidopsis lyrata subsp.
lyrata]
Length = 141
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Query: 42 AARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRP 83
+AR L AS R+M REPS+ VRE AAEQLEERQS WAY +P
Sbjct: 41 SARFLSCASSGRVM-REPSMLVREAAAEQLEERQSDWAYFKP 81
>gi|255563598|ref|XP_002522801.1| ring finger protein, putative [Ricinus communis]
gi|223538039|gb|EEF39652.1| ring finger protein, putative [Ricinus communis]
Length = 323
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 71/145 (48%), Gaps = 15/145 (10%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGE 144
++L+ + LV + + L +S EKP P+R+ IVGY + CL + V +++ +
Sbjct: 70 MMLEFIALLVQISMTTFTLVISKMEKPIWPMRIWIVGYDIGCLLSLLLVYGRYRQVHVVQ 129
Query: 145 GVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSF---LWWIVGFYWITA 201
G FG ++ E++R G DS + T L +W+++G W+
Sbjct: 130 GDSFG----------LSDLEQQR--GSEDSRCTHLMNKCRTSLELFFAIWFVMGNVWVFD 177
Query: 202 SGETLISCSPQLYWLCVTFLAFDVV 226
S + +P+L+ LC++ LA++ +
Sbjct: 178 SRFGSFNRAPKLHVLCISLLAWNAL 202
>gi|449463372|ref|XP_004149408.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
Length = 315
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 11/157 (7%)
Query: 93 LVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSV 152
L +I++ L +S EKP P+RL I GY L C V + L + R R +
Sbjct: 67 LFQLIISAFTLAISQAEKPVWPMRLWIGGYDLGC---VLSLLLLYGRHRYH----YLMQR 119
Query: 153 SGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQ 212
G+S + + +++ S + ++ +W+++G W S +P+
Sbjct: 120 DGNSLSDIEHEQQRTNESSRYSHLMNRCRTSLDLFFAIWFVMGNLWAFDSRLASFQRAPK 179
Query: 213 LYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCI 249
L+ LC +F +V+ IC ++ + +CCC+P I
Sbjct: 180 LHLLC----SFLLVWNAICYSFPFILFLLLCCCVPLI 212
>gi|449496857|ref|XP_004160245.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like, partial [Cucumis
sativus]
Length = 299
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 11/157 (7%)
Query: 93 LVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSV 152
L +I++ L +S EKP P+RL I GY L C V + L + R R +
Sbjct: 51 LFQLIISAFTLAISQAEKPVWPMRLWIGGYDLGC---VLSLLLLYGRHRYH----YLMQR 103
Query: 153 SGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQ 212
G+S + + +++ S + ++ +W+++G W S +P+
Sbjct: 104 DGNSLSDIEHEQQRTNESSRYSHLMNRCRTSLDLFFAIWFVMGNLWAFDSRLASFQRAPK 163
Query: 213 LYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCI 249
L+ LC +F +V+ IC ++ + +CCC+P I
Sbjct: 164 LHLLC----SFLLVWNAICYSFPFILFLLLCCCVPLI 196
>gi|357495163|ref|XP_003617870.1| RING finger protein [Medicago truncatula]
gi|355519205|gb|AET00829.1| RING finger protein [Medicago truncatula]
Length = 337
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Query: 102 VLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVT 161
L +S EKP P+R+ I GY + C+ ++ V R R ++ GD++S ++
Sbjct: 100 TLVISKREKPVWPMRIWISGYDIGCVLNLLTV----YGRYRQIYLIQGDALS------LS 149
Query: 162 GDEEERFHGEND-SSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTF 220
E++R GE S + ++ F +W+++G W+ S +P+L+ LC+T
Sbjct: 150 DIEQQRNSGETRMSHLMNKCRTSLEFFFAIWFVMGNVWVFDSRFGSFQQAPKLHVLCITL 209
Query: 221 LAFDVV 226
L ++ +
Sbjct: 210 LTWNAI 215
>gi|147742777|gb|ABQ50557.1| hypothetical protein [Brassica rapa]
Length = 140
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/26 (65%), Positives = 24/26 (92%)
Query: 234 VACLIGIAVCCCLPCILGILYALTER 259
+AC+IGIAVCCCLPCI+ +LYA+ ++
Sbjct: 59 LACVIGIAVCCCLPCIIAVLYAVADQ 84
>gi|357495165|ref|XP_003617871.1| RING finger protein [Medicago truncatula]
gi|355519206|gb|AET00830.1| RING finger protein [Medicago truncatula]
Length = 340
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 63/129 (48%), Gaps = 14/129 (10%)
Query: 102 VLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVT 161
L +S EKP P+R+ I GY + C+ ++ V R R ++ GD++S ++
Sbjct: 100 TLVISKREKPVWPMRIWISGYDIGCVLNLLTV----YGRYRQIYLIQGDALS------LS 149
Query: 162 GDEEERFHGEND----SSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLC 217
E++R GE S + ++ F +W+++G W+ S +P+L+ LC
Sbjct: 150 DIEQQRNSGETSVYRMSHLMNKCRTSLEFFFAIWFVMGNVWVFDSRFGSFQQAPKLHVLC 209
Query: 218 VTFLAFDVV 226
+T L ++ +
Sbjct: 210 ITLLTWNAI 218
>gi|297799346|ref|XP_002867557.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297313393|gb|EFH43816.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 335
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 62/136 (45%), Gaps = 11/136 (8%)
Query: 93 LVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRR--RGEGVVFGD 150
LV + V + L +S E+P P+RL I GY + CL ++ + ++++ +G FGD
Sbjct: 96 LVQITVITSTLALSKKERPVWPMRLWITGYNVGCLLNLMLLYGRYRQQHTSQGNAFSFGD 155
Query: 151 SVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCS 210
+ + R S + ++ +W+++G W+ S +
Sbjct: 156 ---------IELQQRSREETTRCSHLMNRCRTSLELFFAIWFVIGNVWVFDSRFGSFHYA 206
Query: 211 PQLYWLCVTFLAFDVV 226
P L+ LC++ LA++ +
Sbjct: 207 PILHVLCISLLAWNAL 222
>gi|47497169|dbj|BAD19217.1| RING zinc finger protein-like [Oryza sativa Japonica Group]
gi|47497754|dbj|BAD19854.1| RING zinc finger protein-like [Oryza sativa Japonica Group]
gi|215694772|dbj|BAG89963.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 199
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 9/66 (13%)
Query: 190 LWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC--LIGIAVCCCLP 247
+W++VG WI G + + +P LY LC+ FL F C+G A ++ +CCCLP
Sbjct: 9 VWFVVGNVWIFG-GRSSAADAPNLYRLCIVFLTFS------CIGYAMPFILCAMICCCLP 61
Query: 248 CILGIL 253
CI+ ++
Sbjct: 62 CIISVM 67
>gi|297838001|ref|XP_002886882.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332723|gb|EFH63141.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 112
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/28 (75%), Positives = 24/28 (85%)
Query: 56 LREPSVRVRETAAEQLEERQSYWAYSRP 83
+REPS+ VRE AAEQLEERQS WAY +P
Sbjct: 1 MREPSMIVREAAAEQLEERQSDWAYFKP 28
>gi|297837999|ref|XP_002886881.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332722|gb|EFH63140.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 88
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/28 (75%), Positives = 24/28 (85%)
Query: 56 LREPSVRVRETAAEQLEERQSYWAYSRP 83
+REPS+ VRE AAEQLEERQS WAY +P
Sbjct: 1 MREPSMIVREVAAEQLEERQSDWAYFKP 28
>gi|4938496|emb|CAB43854.1| putative protein [Arabidopsis thaliana]
gi|7269510|emb|CAB79513.1| putative protein [Arabidopsis thaliana]
Length = 464
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 65/139 (46%), Gaps = 17/139 (12%)
Query: 93 LVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSV 152
L+ + V + L +S NE+P P+RL I GY + CL ++ + ++++ F
Sbjct: 225 LLQITVITSTLALSKNERPVWPMRLWITGYNVGCLLNLMLLYGRYRQQDTSHENAFS--- 281
Query: 153 SGSSSTTVTGDEEERFHGENDSSVAKNL-----ESANTFLSFLWWIVGFYWITASGETLI 207
GD E++ +++ +L S F + +W+++G W+ S
Sbjct: 282 --------FGDIEQQQRSREETTRCSHLMNKCRTSLELFFA-IWFVIGNVWVFDSRFGSF 332
Query: 208 SCSPQLYWLCVTFLAFDVV 226
+P L+ LC++ LA++ +
Sbjct: 333 HYAPILHVLCISLLAWNAL 351
>gi|145345425|ref|NP_194388.2| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|334186942|ref|NP_001190848.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|110743905|dbj|BAE99787.1| hypothetical protein [Arabidopsis thaliana]
gi|332659822|gb|AEE85222.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332659823|gb|AEE85223.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 335
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 61/136 (44%), Gaps = 11/136 (8%)
Query: 93 LVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGE--GVVFGD 150
L+ + V + L +S NE+P P+RL I GY + CL ++ + ++++ FGD
Sbjct: 96 LLQITVITSTLALSKNERPVWPMRLWITGYNVGCLLNLMLLYGRYRQQDTSHENAFSFGD 155
Query: 151 SVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCS 210
+ + R S + ++ +W+++G W+ S +
Sbjct: 156 ---------IEQQQRSREETTRCSHLMNKCRTSLELFFAIWFVIGNVWVFDSRFGSFHYA 206
Query: 211 PQLYWLCVTFLAFDVV 226
P L+ LC++ LA++ +
Sbjct: 207 PILHVLCISLLAWNAL 222
>gi|297799898|ref|XP_002867833.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313669|gb|EFH44092.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 99
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/28 (75%), Positives = 24/28 (85%)
Query: 56 LREPSVRVRETAAEQLEERQSYWAYSRP 83
+REPS+ VRE AAEQLEERQS WAY +P
Sbjct: 1 MREPSMLVREAAAEQLEERQSDWAYLQP 28
>gi|224056493|ref|XP_002298883.1| predicted protein [Populus trichocarpa]
gi|222846141|gb|EEE83688.1| predicted protein [Populus trichocarpa]
Length = 341
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 73/152 (48%), Gaps = 18/152 (11%)
Query: 81 SRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRR 140
S P ++L+ + ++ + + L +S EKP P+R+ I+GY + C+ + + +++
Sbjct: 81 SSPWMMLEFVALVIQISITMFTLAISKAEKPVWPVRIWIIGYNIGCVLSLLLLYGRYRQI 140
Query: 141 RRGEGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKN---LESANTFLSF---LWWIV 194
+ FG + E++R G +SSV + + T L +W+++
Sbjct: 141 NTTQADGFG----------LPDLEQQR--GSEESSVCRCSILMHKCRTSLELFFAIWFVM 188
Query: 195 GFYWITASGETLISCSPQLYWLCVTFLAFDVV 226
G W+ S +P+L+ LC++ LA++ +
Sbjct: 189 GNVWVFDSRFGSYHRAPKLHVLCISLLAWNAL 220
>gi|297837997|ref|XP_002886880.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332721|gb|EFH63139.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 88
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/28 (71%), Positives = 23/28 (82%)
Query: 56 LREPSVRVRETAAEQLEERQSYWAYSRP 83
+REPS+ VRE A EQLEERQS WAY +P
Sbjct: 1 MREPSMIVREAATEQLEERQSDWAYFKP 28
>gi|357153329|ref|XP_003576416.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Brachypodium
distachyon]
Length = 317
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 10/68 (14%)
Query: 190 LWWIVGFYWITASGETLISC--SPQLYWLCVTFLAFDVVFVMICVGVAC--LIGIAVCCC 245
+W++VG WI T +P +Y LC+ FLA CVG A ++ A+CCC
Sbjct: 113 VWFVVGNVWIFGGRGTSSDAQDAPNMYRLCLAFLALS------CVGYAVPFIMCAAICCC 166
Query: 246 LPCILGIL 253
PC++ +L
Sbjct: 167 FPCLISVL 174
>gi|414885024|tpg|DAA61038.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 382
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 72/172 (41%), Gaps = 25/172 (14%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGE 144
I +++ + V+ A +L S +E P PL I+GY L C+ + + + R R
Sbjct: 90 ISFEIVMYIAQVVAAIVILIFSRHEHPHAPLFAWIIGYTLGCIASLPLIYWRYVHRNR-- 147
Query: 145 GVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGE 204
+ + ++ + +++ E N S + +G I+
Sbjct: 148 --------------HLDQEPQQPPTTYPTLTPSQSSEGRNHRTSGIVLHLGCISISCPSI 193
Query: 205 TL-ISCSPQLYWLCVTFLAFDVVFVMICVGVAC--LIGIAVCCCLPCILGIL 253
+ +P +Y LC+ FLA CVG A ++ A+CCC PC++ +L
Sbjct: 194 SSDAQDAPNMYRLCLAFLALS------CVGYAIPFIMCAAICCCFPCLISVL 239
>gi|357509167|ref|XP_003624872.1| D-mannose binding lectin family protein expressed [Medicago
truncatula]
gi|355499887|gb|AES81090.1| D-mannose binding lectin family protein expressed [Medicago
truncatula]
Length = 617
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 175 SVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYW 215
S+ K LE NT S++WW+ F WI + SP+LYW
Sbjct: 577 SIVKKLEPTNTLTSYVWWVFEFNWIVVEWPSASGRSPRLYW 617
>gi|215704127|dbj|BAG92967.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 132
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/26 (65%), Positives = 22/26 (84%)
Query: 234 VACLIGIAVCCCLPCILGILYALTER 259
+AC IGIA+CCCLPC++ ILYAL +
Sbjct: 1 MACFIGIALCCCLPCVIAILYALAGQ 26
>gi|357130798|ref|XP_003567033.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Brachypodium
distachyon]
Length = 321
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 62/136 (45%), Gaps = 22/136 (16%)
Query: 96 VIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGS 155
+++ V+ S E+P PLRL + Y + +V + L F R R
Sbjct: 93 MLITTVVVVSSPKERPAWPLRLWVAAYNVG---NVLSLPLLFWRHRH------------- 136
Query: 156 SSTTVTGDEEERFHGENDS--SVAKNLESANTFLSF---LWWIVGFYWITASGETLISCS 210
SS GD+ E HG +D+ + + + A FL +W+++G W+ + +
Sbjct: 137 SSAAGRGDDPE-MHGASDALRNSSYLMNKARAFLELFFAMWFVMGNVWVFDARLGSFHRA 195
Query: 211 PQLYWLCVTFLAFDVV 226
P+LY LC+ L+++ +
Sbjct: 196 PRLYALCIGLLSWNAI 211
>gi|414880832|tpg|DAA57963.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 429
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 18/136 (13%)
Query: 96 VIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGS 155
V++ AV+ S E+P PLRL + Y + +V + L + + S S
Sbjct: 197 VVLTTAVVATSAAERPAWPLRLWVAAYNVG---NVLSLPLLY----------WRHRHSSS 243
Query: 156 SSTTVTGDEEERFHGENDSSVAKN--LESANTFLSF---LWWIVGFYWITASGETLISCS 210
SS+ G + HG ND+ ++ + A FL +W+++G W+ + +
Sbjct: 244 SSSAGGGRGDLEMHGANDAPGNRSYLMNKARAFLELFFAMWFVMGNVWVFDARLGSFQRA 303
Query: 211 PQLYWLCVTFLAFDVV 226
P+LY LCV+ LA++ V
Sbjct: 304 PRLYALCVSLLAWNAV 319
>gi|414880831|tpg|DAA57962.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 469
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 18/136 (13%)
Query: 96 VIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGS 155
V++ AV+ S E+P PLRL + Y + +V + L + + S S
Sbjct: 197 VVLTTAVVATSAAERPAWPLRLWVAAYNVG---NVLSLPLLY----------WRHRHSSS 243
Query: 156 SSTTVTGDEEERFHGENDSSVAKN--LESANTFLSF---LWWIVGFYWITASGETLISCS 210
SS+ G + HG ND+ ++ + A FL +W+++G W+ + +
Sbjct: 244 SSSAGGGRGDLEMHGANDAPGNRSYLMNKARAFLELFFAMWFVMGNVWVFDARLGSFQRA 303
Query: 211 PQLYWLCVTFLAFDVV 226
P+LY LCV+ LA++ V
Sbjct: 304 PRLYALCVSLLAWNAV 319
>gi|297844460|ref|XP_002890111.1| hypothetical protein ARALYDRAFT_334843 [Arabidopsis lyrata subsp.
lyrata]
gi|297335953|gb|EFH66370.1| hypothetical protein ARALYDRAFT_334843 [Arabidopsis lyrata subsp.
lyrata]
Length = 258
Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 64/155 (41%), Gaps = 33/155 (21%)
Query: 90 LWN-------LVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRR 142
LWN LV ++ + VL V+ +E + L ++GY C+ + + L R+
Sbjct: 61 LWNTMELVVTLVQIVASLVVLTVAKDEHLQALLLTWVIGYTCGCIANTLVLLLSCVRKYN 120
Query: 143 GEGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITAS 202
GV S T + G V L+ +W ++G WI
Sbjct: 121 RIGVY--------SRTRIDG-------------VMDALKMGIECFFVVWLVLGILWI-CY 158
Query: 203 GETLISCSPQLYWLCVTFLAFDVV----FVMICVG 233
G + S +P+LY LCV F+AF + V++C G
Sbjct: 159 GHSSPSDAPKLYRLCVVFIAFSCIRFAYAVLLCAG 193
>gi|326505186|dbj|BAK02980.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 305
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 59/136 (43%), Gaps = 22/136 (16%)
Query: 96 VIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGS 155
+++ V+ S E+P PLRL + Y + +V + L + R +
Sbjct: 77 MLITTTVVATSPKERPAWPLRLWVTAYNVG---NVLSLPLLYWRHQH------------- 120
Query: 156 SSTTVTGDEEERFHGENDS--SVAKNLESANTFLSF---LWWIVGFYWITASGETLISCS 210
S GD+ E HG D+ + + A FL +W+++G W+ + +
Sbjct: 121 SLAARRGDDPE-MHGAGDALRDSSYLMNKARAFLELFFAMWFVMGNVWVFDARLGSFHRA 179
Query: 211 PQLYWLCVTFLAFDVV 226
P+LY LC+ LA++ V
Sbjct: 180 PRLYALCIGLLAWNAV 195
>gi|224114523|ref|XP_002316784.1| predicted protein [Populus trichocarpa]
gi|222859849|gb|EEE97396.1| predicted protein [Populus trichocarpa]
Length = 293
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 70/150 (46%), Gaps = 14/150 (9%)
Query: 81 SRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRR 140
S ++L+ + L+ + + L +S E P P+R+ I+GY + C+ + + +++
Sbjct: 33 SSSWMMLEFVALLLQICITTFTLAISKAENPVWPVRIWIIGYNIGCVLSLLLLYGRYRQL 92
Query: 141 RRGEGVVFG----DSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGF 196
+G FG + GS ++V R+ S + ++ +W+++G
Sbjct: 93 NATQGDGFGLPDLEQQGGSEESSVC-----RY-----SHLMNKCRTSLELFFAIWFVMGN 142
Query: 197 YWITASGETLISCSPQLYWLCVTFLAFDVV 226
W+ S +P+L+ LC++ LA++ +
Sbjct: 143 VWVFDSRFGSYFRAPKLHVLCISLLAWNAL 172
>gi|297846804|ref|XP_002891283.1| hypothetical protein ARALYDRAFT_314116 [Arabidopsis lyrata subsp.
lyrata]
gi|297337125|gb|EFH67542.1| hypothetical protein ARALYDRAFT_314116 [Arabidopsis lyrata subsp.
lyrata]
Length = 227
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 57/140 (40%), Gaps = 31/140 (22%)
Query: 87 LDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGV 146
++ + N+V ++ AF V+ + +E PE + I+GY C+ + +
Sbjct: 61 IEFVLNIVQIVAAFVVVNRAKDEHPETSFLIWIIGYTCGCVAILL--------------I 106
Query: 147 VFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETL 206
F + VS S + E F F+ W++ F WI S +
Sbjct: 107 QFINCVSSRSYEVIIDFVTEIFE-----------------YFFVGWVLLFLWIYHSSSSS 149
Query: 207 ISCSPQLYWLCVTFLAFDVV 226
+ + Q +WLC+ FLAF +
Sbjct: 150 LYDNTQHFWLCMAFLAFTCI 169
>gi|326505908|dbj|BAJ91193.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 720
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 57/136 (41%), Gaps = 22/136 (16%)
Query: 96 VIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGS 155
+++ V+ S E+P PLRL + Y + +V + L + R + GD
Sbjct: 492 MLITTTVVATSPKERPAWPLRLWVTAYNVG---NVLSLPLLYWRHQHSLAARRGD----- 543
Query: 156 SSTTVTGDEEERFHGENDS--SVAKNLESANTFLSF---LWWIVGFYWITASGETLISCS 210
+ HG D+ + + A FL +W+++G W+ + +
Sbjct: 544 ---------DPEMHGAGDALRDSSYLMNKARAFLELFFAMWFVMGNVWVFDARLGSFHRA 594
Query: 211 PQLYWLCVTFLAFDVV 226
P+LY LC+ LA++ V
Sbjct: 595 PRLYALCIGLLAWNAV 610
>gi|163839316|ref|YP_001623721.1| sdenosylmethionine-8-amino-7-oxononanoate aminotransferase
[Renibacterium salmoninarum ATCC 33209]
gi|162952792|gb|ABY22307.1| sdenosylmethionine-8-amino-7-oxononanoate aminotransferase
[Renibacterium salmoninarum ATCC 33209]
Length = 442
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 13/118 (11%)
Query: 19 SLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYW 78
SL + R R LL P PL G A + ASG RL LR+ + R + E ++ S+W
Sbjct: 5 SLAGLIDRDRGLLWHPYAPLNGVAPYAVESASGVRLSLRDNNGR----SYEAIDAMSSWW 60
Query: 79 ----AYSRPIIVLDVLWNLV-FVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVF 131
Y P++ +L L F V F + +P V L ++ + + L HVF
Sbjct: 61 RMVHGYRNPVLDRAILAQLAEFSHVMFG----GLTHEPAVELAEKLRQMSPEPLQHVF 114
>gi|429962863|gb|ELA42407.1| hypothetical protein VICG_00506 [Vittaforma corneae ATCC 50505]
Length = 248
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 24/146 (16%)
Query: 82 RPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRR 141
R ++V D++++ ++ + VL ++ N+ E PL++ + GY L C
Sbjct: 27 RTLVVTDLIFHGARILFSIFVLYITRNDIVEEPLKVFLTGYILLC--------------- 71
Query: 142 RGEGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNL-ESANTFLSFLWWIVGFYWIT 200
+ + F S + EE N +V NL E N F W+I+G++W+
Sbjct: 72 AAKAITFFSKNSAFFHINRLPEYEE---SNNGLAVFSNLVEGCNLF----WYILGYHWLQ 124
Query: 201 ASGETLISCSPQLYWLCVTFLAFDVV 226
E P LY+ V +L V
Sbjct: 125 QC-ENCSQTHPLLYYTTVIWLILGFV 149
>gi|171060737|ref|YP_001793086.1| PAS/PAC sensor hybrid histidine kinase [Leptothrix cholodnii SP-6]
gi|170778182|gb|ACB36321.1| PAS/PAC sensor hybrid histidine kinase [Leptothrix cholodnii SP-6]
Length = 1333
Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 7 ADAAETSPLLAHSLPDHL---IRSRRLLR--RPPPPLRGAAARLLRRASGRRLMLREPSV 61
ADA P+ A +L D L +RSR R P PP +G A +LLRR +G+R++L E +
Sbjct: 1030 ADAVLVKPITASALHDTLMRVLRSRSATRSAEPAPPGQGEA-QLLRRHAGQRVLLAEDNP 1088
Query: 62 RVRETAAEQLE 72
+E A E L+
Sbjct: 1089 INQEVANELLQ 1099
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.328 0.140 0.446
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,324,390,627
Number of Sequences: 23463169
Number of extensions: 178544149
Number of successful extensions: 661678
Number of sequences better than 100.0: 245
Number of HSP's better than 100.0 without gapping: 145
Number of HSP's successfully gapped in prelim test: 100
Number of HSP's that attempted gapping in prelim test: 661178
Number of HSP's gapped (non-prelim): 287
length of query: 270
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 130
effective length of database: 9,074,351,707
effective search space: 1179665721910
effective search space used: 1179665721910
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 75 (33.5 bits)