Query 024233
Match_columns 270
No_of_seqs 186 out of 1937
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 04:40:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024233.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024233hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rp8_A Flavoprotein monooxygen 100.0 2.5E-30 8.4E-35 225.7 27.0 232 12-252 16-248 (407)
2 3alj_A 2-methyl-3-hydroxypyrid 99.9 1.3E-25 4.5E-30 194.0 23.5 213 18-250 10-230 (379)
3 2vou_A 2,6-dihydroxypyridine h 99.9 2.9E-25 1E-29 193.0 24.7 214 18-251 4-228 (397)
4 2xdo_A TETX2 protein; tetracyc 99.9 5.2E-25 1.8E-29 191.4 25.1 228 12-252 19-253 (398)
5 4hb9_A Similarities with proba 99.9 1.1E-25 3.9E-30 195.8 19.2 185 20-212 2-192 (412)
6 2qa2_A CABE, polyketide oxygen 99.9 6.8E-25 2.3E-29 195.7 24.6 210 17-248 10-225 (499)
7 2qa1_A PGAE, polyketide oxygen 99.9 7.6E-25 2.6E-29 195.4 23.9 211 16-248 8-224 (500)
8 2x3n_A Probable FAD-dependent 99.9 5E-25 1.7E-29 191.6 21.7 214 18-248 5-228 (399)
9 3fmw_A Oxygenase; mithramycin, 99.9 2.5E-25 8.7E-30 201.1 15.9 216 17-250 47-270 (570)
10 3i3l_A Alkylhalidase CMLS; fla 99.9 5E-24 1.7E-28 193.2 24.4 226 17-251 21-255 (591)
11 3c96_A Flavin-containing monoo 99.9 1.2E-23 4E-28 183.6 25.0 218 18-249 3-240 (410)
12 2r0c_A REBC; flavin adenine di 99.9 1.9E-23 6.4E-28 188.6 25.2 222 11-241 18-256 (549)
13 3e1t_A Halogenase; flavoprotei 99.9 1.7E-23 5.9E-28 187.4 24.4 223 18-251 6-239 (512)
14 3nix_A Flavoprotein/dehydrogen 99.9 2.6E-23 8.9E-28 181.8 22.5 220 18-250 4-235 (421)
15 3ihg_A RDME; flavoenzyme, anth 99.9 2.5E-23 8.4E-28 187.5 21.8 216 18-241 4-241 (535)
16 1pn0_A Phenol 2-monooxygenase; 99.9 6.8E-23 2.3E-27 188.4 22.9 222 18-251 7-296 (665)
17 2dkh_A 3-hydroxybenzoate hydro 99.9 5.5E-22 1.9E-26 181.9 24.1 222 18-250 31-276 (639)
18 1k0i_A P-hydroxybenzoate hydro 99.9 2.6E-22 8.8E-27 174.1 19.1 215 19-250 2-227 (394)
19 3oz2_A Digeranylgeranylglycero 99.9 5.3E-22 1.8E-26 171.6 19.7 218 17-251 2-230 (397)
20 3atr_A Conserved archaeal prot 99.9 1.9E-21 6.6E-26 171.7 20.6 213 19-251 6-236 (453)
21 3cgv_A Geranylgeranyl reductas 99.9 2.5E-21 8.4E-26 167.8 19.2 215 18-251 3-230 (397)
22 2weu_A Tryptophan 5-halogenase 99.8 2.8E-19 9.5E-24 160.2 24.0 219 19-248 2-295 (511)
23 2pyx_A Tryptophan halogenase; 99.8 2.7E-19 9.4E-24 160.7 22.6 216 18-242 6-294 (526)
24 2aqj_A Tryptophan halogenase, 99.8 3.2E-18 1.1E-22 154.2 22.5 217 18-241 4-282 (538)
25 2e4g_A Tryptophan halogenase; 99.8 1E-17 3.4E-22 151.3 24.1 214 18-240 24-311 (550)
26 2gmh_A Electron transfer flavo 99.8 5.8E-17 2E-21 147.1 23.8 218 18-251 34-295 (584)
27 3c4a_A Probable tryptophan hyd 99.7 2.8E-17 9.7E-22 141.8 12.1 193 20-247 1-204 (381)
28 3nyc_A D-arginine dehydrogenas 99.7 1.6E-16 5.5E-21 136.7 14.2 65 126-192 148-216 (381)
29 2oln_A NIKD protein; flavoprot 99.7 2.4E-15 8.2E-20 130.3 21.4 170 19-192 4-215 (397)
30 2gf3_A MSOX, monomeric sarcosi 99.7 1E-15 3.5E-20 132.1 18.8 220 19-246 3-268 (389)
31 1ryi_A Glycine oxidase; flavop 99.7 6.4E-16 2.2E-20 133.1 17.2 223 14-247 12-273 (382)
32 2gag_B Heterotetrameric sarcos 99.7 2.6E-15 8.8E-20 130.3 21.0 224 17-249 19-288 (405)
33 1y56_B Sarcosine oxidase; dehy 99.7 5.3E-16 1.8E-20 133.7 15.4 172 18-192 4-212 (382)
34 3pvc_A TRNA 5-methylaminomethy 99.7 3.6E-16 1.2E-20 144.6 15.1 170 18-188 263-471 (689)
35 3dje_A Fructosyl amine: oxygen 99.7 2.3E-15 7.9E-20 132.1 17.5 61 127-188 156-223 (438)
36 1yvv_A Amine oxidase, flavin-c 99.7 2.3E-15 7.9E-20 127.3 16.4 156 19-191 2-167 (336)
37 3ps9_A TRNA 5-methylaminomethy 99.7 3E-15 1E-19 138.3 18.1 62 126-188 411-475 (676)
38 2uzz_A N-methyl-L-tryptophan o 99.7 1.3E-14 4.4E-19 124.5 20.9 165 19-187 2-205 (372)
39 3da1_A Glycerol-3-phosphate de 99.7 4.2E-16 1.4E-20 140.8 11.8 65 127-192 165-239 (561)
40 2qcu_A Aerobic glycerol-3-phos 99.7 1.7E-14 5.7E-19 128.8 21.6 115 127-247 144-271 (501)
41 3dme_A Conserved exported prot 99.6 8.1E-15 2.8E-19 125.3 18.3 66 126-192 144-216 (369)
42 2bry_A NEDD9 interacting prote 99.6 1.9E-15 6.6E-20 134.6 14.1 136 17-192 90-236 (497)
43 3axb_A Putative oxidoreductase 99.6 3.8E-15 1.3E-19 131.1 14.1 174 17-192 21-261 (448)
44 3c4n_A Uncharacterized protein 99.6 1.6E-15 5.3E-20 132.0 10.5 168 19-192 36-244 (405)
45 3ihm_A Styrene monooxygenase A 99.6 1E-14 3.4E-19 127.8 13.8 208 18-252 21-237 (430)
46 3v76_A Flavoprotein; structura 99.6 6.7E-15 2.3E-19 128.1 12.4 144 17-186 25-187 (417)
47 2i0z_A NAD(FAD)-utilizing dehy 99.6 1.8E-15 6.1E-20 133.2 8.2 154 17-186 24-191 (447)
48 1qo8_A Flavocytochrome C3 fuma 99.5 5.1E-14 1.8E-18 127.5 13.0 167 18-192 120-318 (566)
49 3nlc_A Uncharacterized protein 99.5 5.2E-14 1.8E-18 126.1 11.2 57 130-187 218-278 (549)
50 1pj5_A N,N-dimethylglycine oxi 99.5 6E-13 2E-17 125.6 18.7 73 126-200 145-221 (830)
51 3ces_A MNMG, tRNA uridine 5-ca 99.5 3.4E-13 1.2E-17 122.0 15.6 159 14-192 23-187 (651)
52 2cul_A Glucose-inhibited divis 99.5 4.3E-13 1.5E-17 107.7 13.7 125 18-192 2-131 (232)
53 1y0p_A Fumarate reductase flav 99.5 4.2E-13 1.4E-17 121.6 15.2 162 18-190 125-321 (571)
54 1rp0_A ARA6, thiazole biosynth 99.5 7.7E-13 2.6E-17 109.5 15.2 138 18-192 38-197 (284)
55 2gqf_A Hypothetical protein HI 99.5 1.9E-13 6.6E-18 118.5 10.7 143 18-186 3-168 (401)
56 4a9w_A Monooxygenase; baeyer-v 99.5 1.6E-13 5.4E-18 116.6 10.0 128 18-187 2-133 (357)
57 2rgh_A Alpha-glycerophosphate 99.5 2.8E-12 9.7E-17 116.0 18.5 61 128-189 184-253 (571)
58 2gv8_A Monooxygenase; FMO, FAD 99.5 2.7E-13 9.4E-18 119.3 11.4 61 128-188 111-179 (447)
59 2ywl_A Thioredoxin reductase r 99.4 9E-13 3.1E-17 101.5 12.1 112 20-192 2-116 (180)
60 2zxi_A TRNA uridine 5-carboxym 99.4 1.8E-12 6.2E-17 116.9 15.7 153 18-191 26-185 (637)
61 3jsk_A Cypbp37 protein; octame 99.4 1.5E-12 5.1E-17 109.5 14.1 137 19-192 79-257 (344)
62 3cp8_A TRNA uridine 5-carboxym 99.4 2.1E-12 7E-17 116.9 15.3 152 18-190 20-178 (641)
63 1c0p_A D-amino acid oxidase; a 99.4 1.4E-12 4.9E-17 111.5 13.4 37 18-54 5-41 (363)
64 3fbs_A Oxidoreductase; structu 99.4 9.3E-13 3.2E-17 109.1 11.7 111 19-188 2-114 (297)
65 3ab1_A Ferredoxin--NADP reduct 99.4 7.9E-13 2.7E-17 112.9 11.4 119 18-190 13-135 (360)
66 3f8d_A Thioredoxin reductase ( 99.4 8.3E-13 2.8E-17 110.7 11.3 114 14-187 10-126 (323)
67 4at0_A 3-ketosteroid-delta4-5a 99.4 3.3E-12 1.1E-16 114.2 15.8 41 18-58 40-80 (510)
68 2zbw_A Thioredoxin reductase; 99.4 1.1E-12 3.8E-17 110.8 11.7 120 18-190 4-125 (335)
69 1w4x_A Phenylacetone monooxyge 99.4 8.3E-13 2.9E-17 118.9 11.5 138 17-189 14-157 (542)
70 3qj4_A Renalase; FAD/NAD(P)-bi 99.4 2.4E-12 8.1E-17 109.3 13.5 146 20-184 2-163 (342)
71 3gwf_A Cyclohexanone monooxyge 99.4 6.8E-13 2.3E-17 119.2 10.1 137 18-189 7-150 (540)
72 4ap3_A Steroid monooxygenase; 99.4 1.4E-12 4.6E-17 117.5 9.9 137 17-188 19-161 (549)
73 4fk1_A Putative thioredoxin re 99.4 4E-12 1.4E-16 106.1 12.1 111 17-186 4-117 (304)
74 3itj_A Thioredoxin reductase 1 99.4 4.2E-12 1.4E-16 107.1 11.7 119 17-188 20-144 (338)
75 2xve_A Flavin-containing monoo 99.4 3.3E-12 1.1E-16 112.9 11.4 150 20-189 3-169 (464)
76 1kf6_A Fumarate reductase flav 99.4 1.8E-11 6.1E-16 111.3 16.3 163 18-192 4-203 (602)
77 1d4d_A Flavocytochrome C fumar 99.4 7.3E-12 2.5E-16 113.4 13.3 165 18-191 125-322 (572)
78 2q0l_A TRXR, thioredoxin reduc 99.3 8.9E-12 3E-16 104.1 12.3 112 20-189 2-117 (311)
79 3lzw_A Ferredoxin--NADP reduct 99.3 9E-12 3.1E-16 104.8 12.3 115 18-186 6-123 (332)
80 3i6d_A Protoporphyrinogen oxid 99.3 2.3E-12 7.7E-17 113.8 8.8 57 132-188 235-291 (470)
81 3uox_A Otemo; baeyer-villiger 99.3 2.4E-12 8.2E-17 115.8 8.3 138 17-189 7-150 (545)
82 1chu_A Protein (L-aspartate ox 99.3 6.9E-12 2.4E-16 112.7 11.2 48 17-65 6-53 (540)
83 3g3e_A D-amino-acid oxidase; F 99.3 3.5E-13 1.2E-17 114.8 2.0 46 20-65 1-52 (351)
84 2h88_A Succinate dehydrogenase 99.3 5.5E-11 1.9E-15 108.2 16.2 164 18-189 17-220 (621)
85 2gjc_A Thiazole biosynthetic e 99.3 4.1E-11 1.4E-15 100.2 13.9 137 19-192 65-245 (326)
86 3s5w_A L-ornithine 5-monooxyge 99.3 2.9E-11 1E-15 106.7 13.1 148 18-188 29-194 (463)
87 2e5v_A L-aspartate oxidase; ar 99.3 4.9E-11 1.7E-15 105.5 14.4 150 21-191 1-181 (472)
88 2wdq_A Succinate dehydrogenase 99.3 8.5E-11 2.9E-15 106.6 15.8 37 18-54 6-42 (588)
89 2q7v_A Thioredoxin reductase; 99.3 3.5E-11 1.2E-15 101.2 12.4 113 18-188 7-125 (325)
90 3cty_A Thioredoxin reductase; 99.3 2E-11 6.8E-16 102.4 10.8 111 18-188 15-128 (319)
91 3d1c_A Flavin-containing putat 99.3 3.5E-11 1.2E-15 102.9 12.2 138 18-187 3-144 (369)
92 2bs2_A Quinol-fumarate reducta 99.3 1.8E-10 6E-15 105.6 16.9 37 18-54 4-40 (660)
93 1vdc_A NTR, NADPH dependent th 99.3 1.6E-11 5.5E-16 103.5 9.2 118 18-189 7-127 (333)
94 2ivd_A PPO, PPOX, protoporphyr 99.2 1.6E-11 5.5E-16 108.7 9.3 56 131-187 237-295 (478)
95 4a5l_A Thioredoxin reductase; 99.2 1E-10 3.4E-15 97.7 12.7 117 19-186 4-121 (314)
96 1fl2_A Alkyl hydroperoxide red 99.2 5E-11 1.7E-15 99.5 10.8 111 19-188 1-117 (310)
97 4dgk_A Phytoene dehydrogenase; 99.2 6.2E-11 2.1E-15 105.6 11.5 59 133-192 222-284 (501)
98 2a87_A TRXR, TR, thioredoxin r 99.2 5.9E-11 2E-15 100.3 10.7 113 17-188 12-128 (335)
99 3k7m_X 6-hydroxy-L-nicotine ox 99.2 5.4E-11 1.8E-15 103.9 10.7 51 133-185 208-258 (431)
100 1trb_A Thioredoxin reductase; 99.2 7E-11 2.4E-15 98.9 10.1 112 18-188 4-118 (320)
101 3nrn_A Uncharacterized protein 99.2 4.6E-11 1.6E-15 104.2 8.8 54 132-188 189-245 (421)
102 3gyx_A Adenylylsulfate reducta 99.2 5.4E-10 1.8E-14 102.4 14.9 37 18-54 21-63 (662)
103 3ka7_A Oxidoreductase; structu 99.2 4.4E-11 1.5E-15 104.3 7.2 56 132-189 196-255 (425)
104 1jnr_A Adenylylsulfate reducta 99.1 9.7E-10 3.3E-14 100.8 15.7 36 18-53 21-60 (643)
105 1s3e_A Amine oxidase [flavin-c 99.1 2.1E-10 7.1E-15 102.7 10.5 55 132-187 215-269 (520)
106 3lov_A Protoporphyrinogen oxid 99.1 6.2E-11 2.1E-15 104.9 7.0 56 133-189 237-292 (475)
107 3kkj_A Amine oxidase, flavin-c 99.1 5.5E-11 1.9E-15 96.6 5.3 36 19-54 2-37 (336)
108 1hyu_A AHPF, alkyl hydroperoxi 99.1 4.7E-10 1.6E-14 100.4 11.2 112 17-187 210-327 (521)
109 2b9w_A Putative aminooxidase; 99.1 1.5E-09 5.1E-14 94.6 14.0 54 132-187 206-259 (424)
110 4gcm_A TRXR, thioredoxin reduc 99.1 1.9E-10 6.4E-15 96.2 7.9 35 18-52 5-39 (312)
111 2a8x_A Dihydrolipoyl dehydroge 99.1 6.1E-10 2.1E-14 98.3 11.3 139 19-189 3-149 (464)
112 3nks_A Protoporphyrinogen oxid 99.1 3.6E-10 1.2E-14 100.0 9.8 53 133-187 235-291 (477)
113 3o0h_A Glutathione reductase; 99.1 8.1E-10 2.8E-14 98.1 12.1 46 143-189 246-291 (484)
114 1v59_A Dihydrolipoamide dehydr 99.1 8.5E-10 2.9E-14 97.8 11.9 35 18-52 4-38 (478)
115 1rsg_A FMS1 protein; FAD bindi 99.1 8.6E-10 2.9E-14 98.7 11.4 57 131-187 201-258 (516)
116 1dxl_A Dihydrolipoamide dehydr 99.0 1.7E-09 5.8E-14 95.6 11.2 36 18-53 5-40 (470)
117 1ojt_A Surface protein; redox- 99.0 9.4E-10 3.2E-14 97.6 9.5 34 19-52 6-39 (482)
118 4gut_A Lysine-specific histone 99.0 1.3E-09 4.6E-14 101.4 10.3 50 133-185 535-584 (776)
119 2vvm_A Monoamine oxidase N; FA 99.0 1.8E-09 6E-14 96.1 10.6 55 133-187 256-313 (495)
120 2yg5_A Putrescine oxidase; oxi 99.0 8.6E-10 2.9E-14 96.9 8.2 53 132-186 215-268 (453)
121 3r9u_A Thioredoxin reductase; 99.0 5E-09 1.7E-13 87.2 12.5 111 18-186 3-118 (315)
122 3cgb_A Pyridine nucleotide-dis 98.9 6.3E-09 2.1E-13 92.3 12.1 113 19-187 36-153 (480)
123 3qfa_A Thioredoxin reductase 1 98.9 7.2E-09 2.5E-13 92.7 12.2 37 17-53 30-66 (519)
124 3urh_A Dihydrolipoyl dehydroge 98.9 1E-08 3.5E-13 91.1 13.2 36 17-52 23-58 (491)
125 2bc0_A NADH oxidase; flavoprot 98.9 5.6E-09 1.9E-13 92.8 10.7 35 18-52 34-71 (490)
126 3iwa_A FAD-dependent pyridine 98.9 3.9E-09 1.3E-13 93.4 9.5 35 19-53 3-39 (472)
127 3ics_A Coenzyme A-disulfide re 98.9 8.3E-09 2.8E-13 93.8 11.9 114 17-186 34-152 (588)
128 1q1r_A Putidaredoxin reductase 98.9 3.8E-09 1.3E-13 92.3 9.3 111 19-188 4-116 (431)
129 3lad_A Dihydrolipoamide dehydr 98.9 1.1E-08 3.9E-13 90.4 11.9 36 18-53 2-37 (476)
130 1ebd_A E3BD, dihydrolipoamide 98.9 7.3E-09 2.5E-13 91.2 10.6 33 19-51 3-35 (455)
131 4b63_A L-ornithine N5 monooxyg 98.9 3.5E-09 1.2E-13 94.3 8.3 59 128-186 141-214 (501)
132 1zmd_A Dihydrolipoyl dehydroge 98.9 1.1E-08 3.6E-13 90.6 11.0 35 18-52 5-39 (474)
133 3oc4_A Oxidoreductase, pyridin 98.9 7.2E-09 2.5E-13 91.2 9.8 111 20-187 3-116 (452)
134 3klj_A NAD(FAD)-dependent dehy 98.9 2.1E-08 7.3E-13 86.3 12.0 108 18-185 8-115 (385)
135 3ef6_A Toluene 1,2-dioxygenase 98.9 3.2E-08 1.1E-12 85.9 13.1 107 20-186 3-111 (410)
136 3l8k_A Dihydrolipoyl dehydroge 98.9 1.9E-08 6.5E-13 88.8 11.8 34 19-52 4-37 (466)
137 3kd9_A Coenzyme A disulfide re 98.8 9.8E-09 3.3E-13 90.2 9.7 35 19-53 3-39 (449)
138 2v3a_A Rubredoxin reductase; a 98.8 1.8E-08 6E-13 86.8 11.0 101 19-188 145-245 (384)
139 2yqu_A 2-oxoglutarate dehydrog 98.8 1.3E-08 4.4E-13 89.6 10.3 33 20-52 2-34 (455)
140 3lxd_A FAD-dependent pyridine 98.8 1.4E-08 4.9E-13 88.2 10.3 36 18-53 8-45 (415)
141 3h28_A Sulfide-quinone reducta 98.8 3.4E-08 1.2E-12 86.3 12.4 34 20-53 3-38 (430)
142 3dgz_A Thioredoxin reductase 2 98.8 2.6E-08 8.7E-13 88.5 11.7 36 17-52 4-39 (488)
143 2qae_A Lipoamide, dihydrolipoy 98.8 1.5E-08 5.1E-13 89.5 9.9 34 19-52 2-35 (468)
144 3sx6_A Sulfide-quinone reducta 98.8 2.5E-08 8.6E-13 87.3 11.2 34 20-53 5-41 (437)
145 3dgh_A TRXR-1, thioredoxin red 98.8 3.9E-08 1.3E-12 87.2 12.5 35 17-51 7-41 (483)
146 3ntd_A FAD-dependent pyridine 98.8 1.9E-08 6.6E-13 90.8 10.3 111 20-186 2-117 (565)
147 3h8l_A NADH oxidase; membrane 98.8 5.7E-08 2E-12 84.2 12.7 34 20-53 2-38 (409)
148 2eq6_A Pyruvate dehydrogenase 98.8 2.7E-08 9.2E-13 87.8 10.6 34 19-52 6-39 (464)
149 1xdi_A RV3303C-LPDA; reductase 98.8 2.7E-08 9.1E-13 88.6 10.4 34 19-52 2-38 (499)
150 2cdu_A NADPH oxidase; flavoenz 98.8 4.4E-08 1.5E-12 86.1 11.4 34 20-53 1-36 (452)
151 1nhp_A NADH peroxidase; oxidor 98.8 6E-08 2.1E-12 85.1 12.1 34 20-53 1-36 (447)
152 2gqw_A Ferredoxin reductase; f 98.8 4.9E-08 1.7E-12 84.7 11.4 36 18-53 6-43 (408)
153 3hyw_A Sulfide-quinone reducta 98.8 6E-08 2.1E-12 84.7 12.0 34 20-53 3-38 (430)
154 4gde_A UDP-galactopyranose mut 98.8 4.4E-09 1.5E-13 93.8 4.6 53 131-185 221-275 (513)
155 2yqu_A 2-oxoglutarate dehydrog 98.8 7.8E-08 2.7E-12 84.6 12.4 100 19-188 167-266 (455)
156 4b1b_A TRXR, thioredoxin reduc 98.7 1.1E-07 3.7E-12 85.3 13.3 43 146-188 279-321 (542)
157 3ic9_A Dihydrolipoamide dehydr 98.7 4E-09 1.4E-13 93.7 3.7 34 19-52 8-41 (492)
158 2eq6_A Pyruvate dehydrogenase 98.7 6.1E-08 2.1E-12 85.5 11.2 100 19-188 169-273 (464)
159 3fg2_P Putative rubredoxin red 98.7 6.3E-08 2.2E-12 83.9 10.9 33 20-52 2-36 (404)
160 1xhc_A NADH oxidase /nitrite r 98.7 7.9E-08 2.7E-12 82.2 11.2 34 19-53 8-41 (367)
161 1m6i_A Programmed cell death p 98.7 5.5E-09 1.9E-13 92.9 4.0 37 17-53 9-47 (493)
162 1zk7_A HGII, reductase, mercur 98.7 1.5E-07 5.2E-12 83.0 13.1 35 18-52 3-37 (467)
163 1ges_A Glutathione reductase; 98.7 1.6E-07 5.3E-12 82.6 12.2 100 19-188 167-267 (450)
164 3fpz_A Thiazole biosynthetic e 98.7 8.3E-09 2.8E-13 86.8 3.0 36 18-53 64-101 (326)
165 1fec_A Trypanothione reductase 98.6 3.1E-07 1E-11 81.6 13.0 33 18-50 2-35 (490)
166 2r9z_A Glutathione amide reduc 98.6 2.5E-07 8.7E-12 81.5 12.4 100 19-188 166-266 (463)
167 1y56_A Hypothetical protein PH 98.6 8.5E-08 2.9E-12 85.2 8.6 109 19-187 108-220 (493)
168 2v3a_A Rubredoxin reductase; a 98.6 1E-07 3.5E-12 81.9 8.4 34 19-52 4-39 (384)
169 3s5w_A L-ornithine 5-monooxyge 98.6 2.5E-07 8.5E-12 81.4 10.6 140 19-187 227-378 (463)
170 2bcg_G Secretory pathway GDP d 98.6 4.8E-08 1.7E-12 85.9 5.9 37 18-54 10-46 (453)
171 1v59_A Dihydrolipoamide dehydr 98.6 2.8E-07 9.6E-12 81.5 10.9 101 19-189 183-290 (478)
172 4eqs_A Coenzyme A disulfide re 98.6 4.7E-07 1.6E-11 79.2 11.3 110 21-186 2-116 (437)
173 3lxd_A FAD-dependent pyridine 98.6 1.2E-06 4.1E-11 76.0 13.8 100 19-187 152-252 (415)
174 4g6h_A Rotenone-insensitive NA 98.5 1.8E-07 6E-12 83.3 8.4 35 18-52 41-75 (502)
175 2hqm_A GR, grase, glutathione 98.5 7.5E-07 2.6E-11 78.9 11.9 100 19-188 185-287 (479)
176 1nhp_A NADH peroxidase; oxidor 98.5 4.5E-07 1.5E-11 79.5 10.4 96 18-187 148-247 (447)
177 1ebd_A E3BD, dihydrolipoamide 98.5 7.9E-07 2.7E-11 78.1 11.9 100 19-188 170-272 (455)
178 2jae_A L-amino acid oxidase; o 98.5 1E-07 3.4E-12 84.6 6.2 55 131-185 238-295 (489)
179 3fg2_P Putative rubredoxin red 98.5 1.2E-06 4.1E-11 75.7 12.8 100 19-187 142-242 (404)
180 3vrd_B FCCB subunit, flavocyto 98.5 8.3E-07 2.9E-11 76.6 11.6 34 20-53 3-38 (401)
181 2e1m_A L-glutamate oxidase; L- 98.5 9.6E-08 3.3E-12 81.6 5.5 37 17-53 42-79 (376)
182 1v0j_A UDP-galactopyranose mut 98.5 8.2E-08 2.8E-12 83.0 5.1 35 19-53 7-42 (399)
183 3hdq_A UDP-galactopyranose mut 98.5 1.3E-07 4.3E-12 81.5 5.8 37 17-53 27-63 (397)
184 3ef6_A Toluene 1,2-dioxygenase 98.5 6.9E-07 2.4E-11 77.5 10.4 100 19-187 143-242 (410)
185 3ic9_A Dihydrolipoamide dehydr 98.5 1.1E-06 3.7E-11 78.1 11.8 99 19-188 174-276 (492)
186 1q1r_A Putidaredoxin reductase 98.5 1.7E-06 5.9E-11 75.5 12.8 100 19-187 149-251 (431)
187 1xdi_A RV3303C-LPDA; reductase 98.5 1.4E-06 4.7E-11 77.5 12.1 100 19-188 182-281 (499)
188 1ojt_A Surface protein; redox- 98.5 9E-07 3.1E-11 78.4 10.9 100 19-188 185-288 (482)
189 1onf_A GR, grase, glutathione 98.5 2.1E-06 7.2E-11 76.4 13.0 100 19-188 176-277 (500)
190 1sez_A Protoporphyrinogen oxid 98.5 1.5E-07 5.2E-12 83.7 5.6 57 132-188 243-310 (504)
191 2qae_A Lipoamide, dihydrolipoy 98.5 1.6E-06 5.4E-11 76.5 12.0 101 19-188 174-278 (468)
192 3dk9_A Grase, GR, glutathione 98.4 1E-07 3.5E-12 84.4 4.4 38 15-52 16-53 (478)
193 3iwa_A FAD-dependent pyridine 98.4 2E-06 6.8E-11 75.9 12.4 100 19-187 159-259 (472)
194 1mo9_A ORF3; nucleotide bindin 98.4 1.7E-06 5.8E-11 77.4 11.9 99 20-188 215-318 (523)
195 4dsg_A UDP-galactopyranose mut 98.4 2.2E-07 7.6E-12 82.3 5.8 58 130-189 214-273 (484)
196 3ntd_A FAD-dependent pyridine 98.4 2.6E-06 8.9E-11 76.9 12.8 35 19-53 151-185 (565)
197 2gqw_A Ferredoxin reductase; f 98.4 3.1E-06 1.1E-10 73.3 12.7 96 19-187 145-240 (408)
198 1fec_A Trypanothione reductase 98.4 1.5E-06 5.1E-11 77.1 10.9 100 19-188 187-290 (490)
199 2wpf_A Trypanothione reductase 98.4 2.4E-06 8.3E-11 75.9 12.1 100 19-188 191-294 (495)
200 3p1w_A Rabgdi protein; GDI RAB 98.4 2.5E-07 8.5E-12 81.3 5.5 37 17-53 18-54 (475)
201 2a8x_A Dihydrolipoyl dehydroge 98.4 3E-06 1E-10 74.6 12.4 100 19-188 171-273 (464)
202 3oc4_A Oxidoreductase, pyridin 98.4 4.5E-06 1.5E-10 73.3 13.4 99 19-187 147-245 (452)
203 4dna_A Probable glutathione re 98.4 2.3E-07 7.9E-12 81.7 5.1 34 18-51 4-37 (463)
204 2bi7_A UDP-galactopyranose mut 98.4 3E-07 1E-11 79.0 5.6 35 19-53 3-37 (384)
205 1i8t_A UDP-galactopyranose mut 98.4 2.6E-07 8.8E-12 79.0 5.1 34 20-53 2-35 (367)
206 1zmd_A Dihydrolipoyl dehydroge 98.4 2.9E-06 1E-10 74.9 12.0 101 19-188 178-284 (474)
207 2cdu_A NADPH oxidase; flavoenz 98.4 4.5E-06 1.6E-10 73.2 13.0 100 19-187 149-248 (452)
208 1dxl_A Dihydrolipoamide dehydr 98.4 1.9E-06 6.6E-11 76.0 10.4 100 19-188 177-281 (470)
209 3urh_A Dihydrolipoyl dehydroge 98.3 2.9E-06 1E-10 75.3 11.3 100 19-188 198-302 (491)
210 1mo9_A ORF3; nucleotide bindin 98.3 4.6E-07 1.6E-11 81.1 6.0 36 17-52 41-76 (523)
211 3itj_A Thioredoxin reductase 1 98.3 3.3E-06 1.1E-10 70.7 11.0 94 19-187 173-272 (338)
212 3cgb_A Pyridine nucleotide-dis 98.3 3.9E-06 1.4E-10 74.2 11.8 98 18-187 185-283 (480)
213 1lvl_A Dihydrolipoamide dehydr 98.3 1.8E-06 6.2E-11 75.9 9.5 98 19-188 171-270 (458)
214 1zk7_A HGII, reductase, mercur 98.3 5.1E-06 1.7E-10 73.2 12.4 98 19-188 176-273 (467)
215 2vdc_G Glutamate synthase [NAD 98.3 5.6E-07 1.9E-11 79.1 6.0 36 18-53 121-156 (456)
216 2iid_A L-amino-acid oxidase; f 98.3 4.7E-07 1.6E-11 80.4 5.5 53 132-185 241-297 (498)
217 3lad_A Dihydrolipoamide dehydr 98.3 5.8E-06 2E-10 73.0 12.4 100 19-188 180-282 (476)
218 1m6i_A Programmed cell death p 98.3 5.4E-06 1.8E-10 73.6 12.2 100 19-187 180-283 (493)
219 3g5s_A Methylenetetrahydrofola 98.3 5.3E-07 1.8E-11 76.7 5.1 33 20-52 2-34 (443)
220 2q0l_A TRXR, thioredoxin reduc 98.3 8.3E-06 2.9E-10 67.6 12.4 34 19-52 143-176 (311)
221 2hqm_A GR, grase, glutathione 98.3 4.8E-07 1.6E-11 80.1 4.9 35 18-52 10-44 (479)
222 3k30_A Histamine dehydrogenase 98.3 6.4E-07 2.2E-11 82.9 5.8 37 17-53 389-425 (690)
223 1d5t_A Guanine nucleotide diss 98.3 7.9E-07 2.7E-11 77.7 6.0 56 132-188 234-292 (433)
224 3l8k_A Dihydrolipoyl dehydroge 98.3 6.8E-06 2.3E-10 72.4 12.1 98 19-188 172-274 (466)
225 1onf_A GR, grase, glutathione 98.3 5.9E-07 2E-11 79.9 5.2 34 19-52 2-35 (500)
226 1trb_A Thioredoxin reductase; 98.3 8.7E-06 3E-10 67.7 12.1 34 19-52 145-178 (320)
227 2r9z_A Glutathione amide reduc 98.3 6.9E-07 2.4E-11 78.7 5.3 35 18-52 3-37 (463)
228 2bc0_A NADH oxidase; flavoprot 98.3 8.2E-06 2.8E-10 72.3 12.2 99 18-187 193-292 (490)
229 1ges_A Glutathione reductase; 98.3 6.1E-07 2.1E-11 78.8 4.9 35 18-52 3-37 (450)
230 3pl8_A Pyranose 2-oxidase; sub 98.3 6.5E-07 2.2E-11 81.7 4.9 36 18-53 45-80 (623)
231 4dna_A Probable glutathione re 98.2 7.4E-06 2.5E-10 72.1 11.2 99 19-188 170-270 (463)
232 1kdg_A CDH, cellobiose dehydro 98.2 1E-06 3.4E-11 79.3 5.1 37 17-53 5-41 (546)
233 3t37_A Probable dehydrogenase; 98.2 8.9E-07 3E-11 79.2 4.7 35 18-52 16-51 (526)
234 1o94_A Tmadh, trimethylamine d 98.2 1.7E-06 5.8E-11 80.4 6.0 37 17-53 387-423 (729)
235 1lvl_A Dihydrolipoamide dehydr 98.2 9.8E-07 3.4E-11 77.6 4.2 34 18-51 4-37 (458)
236 3d1c_A Flavin-containing putat 98.2 1.4E-05 4.8E-10 67.8 11.2 107 19-188 166-274 (369)
237 3kd9_A Coenzyme A disulfide re 98.2 1.6E-05 5.3E-10 69.7 11.6 97 20-187 149-245 (449)
238 2q7v_A Thioredoxin reductase; 98.1 2.2E-05 7.6E-10 65.5 11.7 34 19-52 152-185 (325)
239 3ics_A Coenzyme A-disulfide re 98.1 1.6E-05 5.6E-10 72.0 11.6 97 19-187 187-283 (588)
240 1b37_A Protein (polyamine oxid 98.1 2.3E-06 7.7E-11 75.5 5.4 57 132-188 206-272 (472)
241 2x8g_A Thioredoxin glutathione 98.1 1.9E-06 6.5E-11 78.4 5.0 34 18-51 106-139 (598)
242 1xhc_A NADH oxidase /nitrite r 98.1 1E-05 3.4E-10 69.1 9.0 34 20-53 144-177 (367)
243 1ps9_A 2,4-dienoyl-COA reducta 98.1 2.6E-06 9E-11 78.5 5.7 37 17-53 371-407 (671)
244 3r9u_A Thioredoxin reductase; 98.1 3.7E-05 1.3E-09 63.6 12.2 93 19-186 147-244 (315)
245 1vdc_A NTR, NADPH dependent th 98.1 2.2E-05 7.7E-10 65.6 11.0 34 19-52 159-192 (333)
246 2z3y_A Lysine-specific histone 98.1 3E-06 1E-10 78.0 6.0 37 17-53 105-141 (662)
247 3dk9_A Grase, GR, glutathione 98.1 2.4E-05 8.2E-10 69.1 11.6 100 19-188 187-295 (478)
248 2zbw_A Thioredoxin reductase; 98.1 2.8E-05 9.4E-10 65.1 11.4 34 19-52 152-185 (335)
249 1fl2_A Alkyl hydroperoxide red 98.1 2.5E-05 8.6E-10 64.6 11.0 34 19-52 144-177 (310)
250 2wpf_A Trypanothione reductase 98.1 2.1E-06 7.1E-11 76.3 4.5 32 19-50 7-39 (495)
251 1lqt_A FPRA; NADP+ derivative, 98.1 1.9E-06 6.6E-11 75.7 4.1 36 18-53 2-44 (456)
252 2xag_A Lysine-specific histone 98.1 4E-06 1.4E-10 78.9 6.4 37 17-53 276-312 (852)
253 3f8d_A Thioredoxin reductase ( 98.0 3.4E-05 1.2E-09 63.9 10.5 94 19-187 154-252 (323)
254 3gwf_A Cyclohexanone monooxyge 98.0 8.6E-05 2.9E-09 66.6 13.4 36 18-53 177-212 (540)
255 3dgh_A TRXR-1, thioredoxin red 98.0 7.1E-05 2.4E-09 66.1 12.7 98 19-187 187-290 (483)
256 3ab1_A Ferredoxin--NADP reduct 98.0 2.4E-05 8.1E-10 66.3 9.2 34 19-52 163-196 (360)
257 1ju2_A HydroxynitrIle lyase; f 98.0 3.1E-06 1E-10 75.9 3.8 35 18-53 25-59 (536)
258 3q9t_A Choline dehydrogenase a 98.0 5.1E-06 1.7E-10 75.0 5.1 36 18-53 5-41 (577)
259 1gte_A Dihydropyrimidine dehyd 98.0 4.7E-06 1.6E-10 80.3 5.2 35 18-52 186-221 (1025)
260 3cty_A Thioredoxin reductase; 98.0 7.8E-05 2.7E-09 61.9 12.0 34 19-52 155-188 (319)
261 4eqs_A Coenzyme A disulfide re 98.0 6.1E-05 2.1E-09 65.7 11.5 94 19-186 147-240 (437)
262 1cjc_A Protein (adrenodoxin re 98.0 5.4E-06 1.8E-10 72.9 4.6 37 18-54 5-43 (460)
263 2a87_A TRXR, TR, thioredoxin r 98.0 4.7E-05 1.6E-09 63.8 10.2 34 19-52 155-188 (335)
264 2gag_A Heterotetrameric sarcos 98.0 5.3E-06 1.8E-10 79.4 4.8 35 19-53 128-162 (965)
265 3qvp_A Glucose oxidase; oxidor 97.9 6E-06 2.1E-10 74.6 4.4 36 17-52 17-53 (583)
266 1coy_A Cholesterol oxidase; ox 97.9 9.9E-06 3.4E-10 72.1 5.7 36 17-52 9-44 (507)
267 3dgz_A Thioredoxin reductase 2 97.9 0.00012 4E-09 64.8 12.3 33 19-51 185-217 (488)
268 3ayj_A Pro-enzyme of L-phenyla 97.9 4.7E-06 1.6E-10 76.6 3.2 34 19-52 56-97 (721)
269 2gv8_A Monooxygenase; FMO, FAD 97.9 4.6E-05 1.6E-09 66.7 9.4 35 18-52 211-246 (447)
270 1n4w_A CHOD, cholesterol oxida 97.9 9.3E-06 3.2E-10 72.3 5.0 35 18-52 4-38 (504)
271 1gpe_A Protein (glucose oxidas 97.9 1.3E-05 4.5E-10 72.6 5.2 37 17-53 22-59 (587)
272 3uox_A Otemo; baeyer-villiger 97.8 0.00016 5.5E-09 64.9 12.2 36 18-53 184-219 (545)
273 3fim_B ARYL-alcohol oxidase; A 97.8 8.8E-06 3E-10 73.3 3.4 35 19-53 2-37 (566)
274 2jbv_A Choline oxidase; alcoho 97.8 1.7E-05 5.8E-10 71.3 4.9 36 18-53 12-48 (546)
275 2xve_A Flavin-containing monoo 97.7 0.00025 8.6E-09 62.3 10.6 34 19-52 197-230 (464)
276 4ap3_A Steroid monooxygenase; 97.7 0.00015 5.1E-09 65.2 8.9 36 18-53 190-225 (549)
277 3fwz_A Inner membrane protein 97.6 6.9E-05 2.4E-09 54.6 5.4 37 17-53 5-41 (140)
278 1vg0_A RAB proteins geranylger 97.6 5.3E-05 1.8E-09 68.8 5.6 36 18-53 7-42 (650)
279 2x8g_A Thioredoxin glutathione 97.6 0.00068 2.3E-08 61.5 12.9 33 19-51 286-318 (598)
280 3lzw_A Ferredoxin--NADP reduct 97.6 0.00032 1.1E-08 58.3 10.0 34 19-52 154-187 (332)
281 3qfa_A Thioredoxin reductase 1 97.6 0.00064 2.2E-08 60.6 12.4 33 19-51 210-242 (519)
282 3fbs_A Oxidoreductase; structu 97.6 0.00026 9E-09 57.8 9.1 33 19-52 141-173 (297)
283 1hyu_A AHPF, alkyl hydroperoxi 97.6 0.00043 1.5E-08 61.8 10.6 34 19-52 355-388 (521)
284 3llv_A Exopolyphosphatase-rela 97.5 9.2E-05 3.1E-09 53.9 4.6 34 20-53 7-40 (141)
285 3k30_A Histamine dehydrogenase 97.5 0.00029 9.9E-09 65.1 8.6 98 19-187 523-625 (690)
286 3ado_A Lambda-crystallin; L-gu 97.5 8.8E-05 3E-09 61.6 4.6 38 16-53 3-40 (319)
287 4g6h_A Rotenone-insensitive NA 97.5 0.00045 1.6E-08 61.3 9.5 43 142-185 285-331 (502)
288 1f0y_A HCDH, L-3-hydroxyacyl-C 97.4 0.00014 4.9E-09 60.1 5.4 34 19-52 15-48 (302)
289 2g1u_A Hypothetical protein TM 97.4 0.00019 6.3E-09 53.2 5.3 36 18-53 18-53 (155)
290 4b63_A L-ornithine N5 monooxyg 97.4 0.00061 2.1E-08 60.5 9.2 36 18-53 245-282 (501)
291 4a9w_A Monooxygenase; baeyer-v 97.4 0.00017 5.8E-09 60.5 4.9 33 19-52 163-195 (357)
292 1lss_A TRK system potassium up 97.3 0.00024 8.2E-09 51.2 5.0 33 20-52 5-37 (140)
293 1id1_A Putative potassium chan 97.3 0.0003 1E-08 51.9 5.5 34 19-52 3-36 (153)
294 2dpo_A L-gulonate 3-dehydrogen 97.3 0.0002 6.7E-09 59.7 4.6 36 18-53 5-40 (319)
295 1cjc_A Protein (adrenodoxin re 97.3 0.0031 1.1E-07 55.3 12.1 35 19-53 145-200 (460)
296 3ic5_A Putative saccharopine d 97.3 0.00031 1.1E-08 49.0 4.7 33 20-52 6-39 (118)
297 1ps9_A 2,4-dienoyl-COA reducta 97.2 0.0019 6.4E-08 59.5 10.9 43 141-187 585-629 (671)
298 2hmt_A YUAA protein; RCK, KTN, 97.2 0.00035 1.2E-08 50.6 4.7 34 20-53 7-40 (144)
299 1lqt_A FPRA; NADP+ derivative, 97.1 0.0034 1.2E-07 55.0 11.0 36 18-53 146-202 (456)
300 2gag_A Heterotetrameric sarcos 97.1 0.0017 5.9E-08 62.2 9.8 33 20-52 285-317 (965)
301 1o94_A Tmadh, trimethylamine d 97.1 0.00058 2E-08 63.5 6.2 34 19-52 528-563 (729)
302 4gcm_A TRXR, thioredoxin reduc 97.1 0.00049 1.7E-08 56.9 5.0 35 19-53 145-179 (312)
303 3klj_A NAD(FAD)-dependent dehy 97.0 0.00058 2E-08 58.5 4.5 36 19-54 146-181 (385)
304 4a5l_A Thioredoxin reductase; 97.0 0.00079 2.7E-08 55.5 5.0 34 19-52 152-185 (314)
305 3c85_A Putative glutathione-re 97.0 0.00072 2.5E-08 51.4 4.4 34 19-52 39-73 (183)
306 4e12_A Diketoreductase; oxidor 96.9 0.00098 3.3E-08 54.5 5.3 34 20-53 5-38 (283)
307 3i83_A 2-dehydropantoate 2-red 96.9 0.00087 3E-08 55.9 5.1 33 20-52 3-35 (320)
308 4id9_A Short-chain dehydrogena 96.9 0.001 3.6E-08 55.7 5.1 53 1-53 1-54 (347)
309 3doj_A AT3G25530, dehydrogenas 96.8 0.0013 4.4E-08 54.5 5.3 36 18-53 20-55 (310)
310 3k6j_A Protein F01G10.3, confi 96.8 0.002 7E-08 56.1 6.6 35 19-53 54-88 (460)
311 3hn2_A 2-dehydropantoate 2-red 96.8 0.00097 3.3E-08 55.4 4.4 33 20-52 3-35 (312)
312 3l4b_C TRKA K+ channel protien 96.8 0.00091 3.1E-08 52.4 3.9 33 21-53 2-34 (218)
313 3tl2_A Malate dehydrogenase; c 96.8 0.0017 5.9E-08 53.9 5.4 35 18-52 7-42 (315)
314 3ghy_A Ketopantoate reductase 96.8 0.0015 5.1E-08 54.8 5.1 32 20-51 4-35 (335)
315 1gte_A Dihydropyrimidine dehyd 96.7 0.012 4E-07 56.8 11.8 33 20-52 333-366 (1025)
316 2raf_A Putative dinucleotide-b 96.7 0.0019 6.5E-08 50.3 5.1 35 19-53 19-53 (209)
317 1zej_A HBD-9, 3-hydroxyacyl-CO 96.7 0.0015 5E-08 53.7 4.4 34 18-52 11-44 (293)
318 3lk7_A UDP-N-acetylmuramoylala 96.7 0.0019 6.4E-08 56.6 5.3 35 18-52 8-42 (451)
319 3qsg_A NAD-binding phosphogluc 96.7 0.0014 4.8E-08 54.4 4.3 40 12-51 17-57 (312)
320 3g17_A Similar to 2-dehydropan 96.7 0.0014 4.8E-08 53.9 4.2 33 20-52 3-35 (294)
321 1pzg_A LDH, lactate dehydrogen 96.7 0.0021 7.2E-08 53.8 5.3 34 19-52 9-43 (331)
322 2ew2_A 2-dehydropantoate 2-red 96.6 0.0019 6.4E-08 53.4 4.9 33 20-52 4-36 (316)
323 3qha_A Putative oxidoreductase 96.6 0.0016 5.6E-08 53.6 4.4 35 19-53 15-49 (296)
324 1ks9_A KPA reductase;, 2-dehyd 96.6 0.0021 7.3E-08 52.4 5.0 33 21-53 2-34 (291)
325 2hjr_A Malate dehydrogenase; m 96.6 0.0024 8.1E-08 53.4 5.2 35 19-53 14-49 (328)
326 3dfz_A SIRC, precorrin-2 dehyd 96.6 0.0026 8.9E-08 49.9 5.0 34 18-51 30-63 (223)
327 3k96_A Glycerol-3-phosphate de 96.6 0.0025 8.7E-08 53.9 5.3 34 19-52 29-62 (356)
328 2qyt_A 2-dehydropantoate 2-red 96.5 0.0015 5.2E-08 54.1 3.7 38 12-50 2-45 (317)
329 2y0c_A BCEC, UDP-glucose dehyd 96.5 0.0023 7.8E-08 56.4 5.0 34 19-52 8-41 (478)
330 1lld_A L-lactate dehydrogenase 96.5 0.0025 8.5E-08 53.0 5.0 33 20-52 8-42 (319)
331 1evy_A Glycerol-3-phosphate de 96.5 0.0019 6.4E-08 54.8 4.2 32 21-52 17-48 (366)
332 4a7p_A UDP-glucose dehydrogena 96.5 0.0027 9.1E-08 55.4 5.2 35 19-53 8-42 (446)
333 3gg2_A Sugar dehydrogenase, UD 96.5 0.0025 8.4E-08 55.7 5.0 34 20-53 3-36 (450)
334 3dtt_A NADP oxidoreductase; st 96.5 0.003 1E-07 50.5 5.1 37 17-53 17-53 (245)
335 1kyq_A Met8P, siroheme biosynt 96.5 0.002 6.7E-08 52.3 4.0 35 18-52 12-46 (274)
336 2uyy_A N-PAC protein; long-cha 96.5 0.0036 1.2E-07 51.9 5.6 35 19-53 30-64 (316)
337 1zcj_A Peroxisomal bifunctiona 96.5 0.0032 1.1E-07 55.2 5.5 34 19-52 37-70 (463)
338 4dio_A NAD(P) transhydrogenase 96.5 0.0033 1.1E-07 53.8 5.2 35 19-53 190-224 (405)
339 4g65_A TRK system potassium up 96.4 0.0015 5.1E-08 57.3 3.2 34 20-53 4-37 (461)
340 4b1b_A TRXR, thioredoxin reduc 96.4 0.0028 9.6E-08 56.7 5.0 35 18-52 222-256 (542)
341 1bg6_A N-(1-D-carboxylethyl)-L 96.4 0.003 1E-07 53.2 5.0 33 20-52 5-37 (359)
342 3ego_A Probable 2-dehydropanto 96.4 0.0032 1.1E-07 52.1 4.9 32 20-52 3-34 (307)
343 3e8x_A Putative NAD-dependent 96.4 0.0037 1.3E-07 49.3 5.1 37 17-53 19-56 (236)
344 2x5o_A UDP-N-acetylmuramoylala 96.4 0.0026 8.7E-08 55.5 4.3 35 19-53 5-39 (439)
345 2ewd_A Lactate dehydrogenase,; 96.4 0.0033 1.1E-07 52.3 4.8 33 20-52 5-38 (317)
346 3ggo_A Prephenate dehydrogenas 96.4 0.0045 1.5E-07 51.4 5.5 35 18-52 32-68 (314)
347 1z82_A Glycerol-3-phosphate de 96.4 0.0037 1.3E-07 52.3 5.0 35 18-52 13-47 (335)
348 3g0o_A 3-hydroxyisobutyrate de 96.4 0.0038 1.3E-07 51.5 5.0 34 19-52 7-40 (303)
349 3g79_A NDP-N-acetyl-D-galactos 96.3 0.0036 1.2E-07 55.0 5.0 34 20-53 19-54 (478)
350 3pef_A 6-phosphogluconate dehy 96.3 0.0039 1.3E-07 51.0 4.9 34 20-53 2-35 (287)
351 3p2y_A Alanine dehydrogenase/p 96.3 0.0032 1.1E-07 53.4 4.5 36 18-53 183-218 (381)
352 4dll_A 2-hydroxy-3-oxopropiona 96.3 0.0036 1.2E-07 52.1 4.8 35 19-53 31-65 (320)
353 3vtf_A UDP-glucose 6-dehydroge 96.3 0.0046 1.6E-07 53.6 5.5 36 18-53 20-55 (444)
354 3oj0_A Glutr, glutamyl-tRNA re 96.3 0.0021 7.3E-08 46.7 2.9 35 19-53 21-55 (144)
355 3hwr_A 2-dehydropantoate 2-red 96.3 0.004 1.4E-07 51.8 4.9 34 18-52 18-51 (318)
356 3h8l_A NADH oxidase; membrane 96.3 0.013 4.6E-07 50.2 8.3 39 143-186 232-270 (409)
357 3mog_A Probable 3-hydroxybutyr 96.3 0.0045 1.5E-07 54.5 5.2 34 20-53 6-39 (483)
358 2vns_A Metalloreductase steap3 96.2 0.0053 1.8E-07 47.9 5.0 35 19-53 28-62 (215)
359 2v6b_A L-LDH, L-lactate dehydr 96.2 0.005 1.7E-07 50.9 4.9 32 21-52 2-35 (304)
360 1jw9_B Molybdopterin biosynthe 96.2 0.0038 1.3E-07 50.0 4.0 36 19-54 31-67 (249)
361 1ldn_A L-lactate dehydrogenase 96.2 0.0055 1.9E-07 50.9 5.0 35 18-52 5-41 (316)
362 3gvi_A Malate dehydrogenase; N 96.2 0.0062 2.1E-07 50.7 5.3 36 18-53 6-42 (324)
363 4ezb_A Uncharacterized conserv 96.1 0.0058 2E-07 50.8 5.0 34 19-52 24-58 (317)
364 1t2d_A LDH-P, L-lactate dehydr 96.1 0.0069 2.4E-07 50.5 5.4 33 20-52 5-38 (322)
365 3ius_A Uncharacterized conserv 96.1 0.0058 2E-07 49.6 4.9 34 20-53 6-39 (286)
366 3l9w_A Glutathione-regulated p 96.1 0.005 1.7E-07 53.1 4.6 34 20-53 5-38 (413)
367 4huj_A Uncharacterized protein 96.1 0.0032 1.1E-07 49.4 3.2 35 19-53 23-58 (220)
368 2zyd_A 6-phosphogluconate dehy 96.1 0.0058 2E-07 53.8 4.9 37 17-53 13-49 (480)
369 1mv8_A GMD, GDP-mannose 6-dehy 96.1 0.0049 1.7E-07 53.6 4.4 33 21-53 2-34 (436)
370 3eag_A UDP-N-acetylmuramate:L- 96.1 0.0067 2.3E-07 50.6 5.0 33 20-52 5-38 (326)
371 2pv7_A T-protein [includes: ch 96.1 0.0093 3.2E-07 49.0 5.8 33 20-52 22-55 (298)
372 3p7m_A Malate dehydrogenase; p 96.0 0.008 2.7E-07 50.0 5.4 34 19-52 5-39 (321)
373 3pid_A UDP-glucose 6-dehydroge 96.0 0.0065 2.2E-07 52.6 4.9 33 20-53 37-69 (432)
374 3pdu_A 3-hydroxyisobutyrate de 96.0 0.0045 1.5E-07 50.6 3.7 33 21-53 3-35 (287)
375 1txg_A Glycerol-3-phosphate de 96.0 0.0054 1.8E-07 51.2 4.3 30 21-50 2-31 (335)
376 3l6d_A Putative oxidoreductase 96.0 0.0087 3E-07 49.4 5.5 35 19-53 9-43 (306)
377 3d0o_A L-LDH 1, L-lactate dehy 96.0 0.0066 2.3E-07 50.4 4.7 35 18-52 5-41 (317)
378 4e21_A 6-phosphogluconate dehy 96.0 0.0074 2.5E-07 51.0 5.0 35 19-53 22-56 (358)
379 2p4q_A 6-phosphogluconate dehy 96.0 0.0076 2.6E-07 53.3 5.3 36 18-53 9-44 (497)
380 4gbj_A 6-phosphogluconate dehy 96.0 0.0048 1.7E-07 50.8 3.8 34 20-53 6-39 (297)
381 1x13_A NAD(P) transhydrogenase 96.0 0.0074 2.5E-07 51.9 5.1 35 19-53 172-206 (401)
382 3gpi_A NAD-dependent epimerase 96.0 0.0092 3.2E-07 48.4 5.5 34 20-53 4-37 (286)
383 1vpd_A Tartronate semialdehyde 95.9 0.0064 2.2E-07 49.9 4.4 34 20-53 6-39 (299)
384 3tri_A Pyrroline-5-carboxylate 95.9 0.0094 3.2E-07 48.6 5.3 35 19-53 3-40 (280)
385 2wtb_A MFP2, fatty acid multif 95.9 0.011 3.8E-07 54.7 6.3 34 20-53 313-346 (725)
386 1ur5_A Malate dehydrogenase; o 95.9 0.0089 3E-07 49.5 5.1 33 20-52 3-36 (309)
387 3c24_A Putative oxidoreductase 95.9 0.01 3.6E-07 48.3 5.6 33 20-52 12-45 (286)
388 2rcy_A Pyrroline carboxylate r 95.9 0.0076 2.6E-07 48.4 4.7 34 20-53 5-42 (262)
389 1guz_A Malate dehydrogenase; o 95.9 0.0085 2.9E-07 49.6 5.0 33 21-53 2-36 (310)
390 2h78_A Hibadh, 3-hydroxyisobut 95.9 0.0069 2.4E-07 49.8 4.5 34 20-53 4-37 (302)
391 4gwg_A 6-phosphogluconate dehy 95.9 0.0085 2.9E-07 52.7 5.2 34 20-53 5-38 (484)
392 2o3j_A UDP-glucose 6-dehydroge 95.9 0.0068 2.3E-07 53.4 4.6 34 20-53 10-45 (481)
393 3ktd_A Prephenate dehydrogenas 95.9 0.0095 3.3E-07 50.0 5.3 35 19-53 8-42 (341)
394 1l7d_A Nicotinamide nucleotide 95.9 0.0097 3.3E-07 50.8 5.3 36 18-53 171-206 (384)
395 3pqe_A L-LDH, L-lactate dehydr 95.9 0.0088 3E-07 49.8 4.8 34 19-52 5-40 (326)
396 3h8v_A Ubiquitin-like modifier 95.8 0.0075 2.5E-07 49.4 4.3 37 18-54 35-72 (292)
397 3rui_A Ubiquitin-like modifier 95.8 0.013 4.4E-07 48.9 5.8 38 18-55 33-71 (340)
398 1jay_A Coenzyme F420H2:NADP+ o 95.8 0.01 3.5E-07 46.0 4.9 32 21-52 2-34 (212)
399 2izz_A Pyrroline-5-carboxylate 95.8 0.0088 3E-07 49.8 4.8 33 20-52 23-59 (322)
400 1pjc_A Protein (L-alanine dehy 95.8 0.01 3.4E-07 50.3 5.2 34 19-52 167-200 (361)
401 3dfu_A Uncharacterized protein 95.8 0.0027 9.4E-08 50.1 1.5 32 20-51 7-38 (232)
402 1dlj_A UDP-glucose dehydrogena 95.8 0.0078 2.7E-07 51.8 4.5 31 21-52 2-32 (402)
403 3o38_A Short chain dehydrogena 95.8 0.014 4.9E-07 46.8 5.7 37 16-52 19-57 (266)
404 1a5z_A L-lactate dehydrogenase 95.8 0.0083 2.8E-07 49.9 4.3 32 21-52 2-35 (319)
405 3d1l_A Putative NADP oxidoredu 95.7 0.0092 3.2E-07 48.1 4.5 33 20-52 11-44 (266)
406 1x0v_A GPD-C, GPDH-C, glycerol 95.7 0.0054 1.9E-07 51.6 3.2 34 20-53 9-49 (354)
407 2aef_A Calcium-gated potassium 95.7 0.0058 2E-07 48.3 3.1 34 19-53 9-42 (234)
408 2eez_A Alanine dehydrogenase; 95.7 0.012 4.1E-07 50.0 5.2 35 18-52 165-199 (369)
409 1y6j_A L-lactate dehydrogenase 95.7 0.011 3.8E-07 49.1 4.9 34 19-52 7-42 (318)
410 2a9f_A Putative malic enzyme ( 95.7 0.01 3.5E-07 50.4 4.6 35 18-52 187-222 (398)
411 2f1k_A Prephenate dehydrogenas 95.7 0.011 3.9E-07 47.8 4.9 32 21-52 2-33 (279)
412 1nyt_A Shikimate 5-dehydrogena 95.7 0.013 4.4E-07 47.5 5.1 34 19-52 119-152 (271)
413 3zwc_A Peroxisomal bifunctiona 95.7 0.016 5.4E-07 53.7 6.1 36 18-53 315-350 (742)
414 3gt0_A Pyrroline-5-carboxylate 95.7 0.014 4.7E-07 46.6 5.1 34 20-53 3-40 (247)
415 3vku_A L-LDH, L-lactate dehydr 95.7 0.011 3.8E-07 49.2 4.7 35 18-52 8-44 (326)
416 3phh_A Shikimate dehydrogenase 95.6 0.015 5.1E-07 47.0 5.2 34 19-52 118-151 (269)
417 2pgd_A 6-phosphogluconate dehy 95.6 0.012 4.2E-07 51.8 5.1 34 20-53 3-36 (482)
418 1yj8_A Glycerol-3-phosphate de 95.6 0.0086 2.9E-07 50.9 3.9 34 20-53 22-62 (375)
419 3ldh_A Lactate dehydrogenase; 95.6 0.018 6.3E-07 47.9 5.8 34 19-52 21-56 (330)
420 1hdo_A Biliverdin IX beta redu 95.6 0.017 5.7E-07 44.1 5.3 34 20-53 4-38 (206)
421 1yqg_A Pyrroline-5-carboxylate 95.6 0.011 3.7E-07 47.5 4.3 32 21-52 2-34 (263)
422 1vl6_A Malate oxidoreductase; 95.6 0.012 4E-07 49.9 4.6 34 18-51 191-225 (388)
423 1zud_1 Adenylyltransferase THI 95.6 0.015 5.3E-07 46.5 5.1 36 19-54 28-64 (251)
424 2gf2_A Hibadh, 3-hydroxyisobut 95.6 0.012 3.9E-07 48.2 4.5 33 21-53 2-34 (296)
425 3c7a_A Octopine dehydrogenase; 95.6 0.0079 2.7E-07 51.7 3.6 30 20-49 3-33 (404)
426 2g5c_A Prephenate dehydrogenas 95.6 0.014 4.7E-07 47.5 4.9 32 21-52 3-36 (281)
427 1hyh_A L-hicdh, L-2-hydroxyiso 95.6 0.011 3.7E-07 48.9 4.3 33 20-52 2-36 (309)
428 2iz1_A 6-phosphogluconate dehy 95.5 0.015 5E-07 51.2 5.2 33 20-52 6-38 (474)
429 2vhw_A Alanine dehydrogenase; 95.5 0.015 5.2E-07 49.5 5.2 36 18-53 167-202 (377)
430 2yjz_A Metalloreductase steap4 94.5 0.0022 7.7E-08 49.6 0.0 36 18-53 18-53 (201)
431 1wdk_A Fatty oxidation complex 95.5 0.012 4.1E-07 54.4 4.8 34 20-53 315-348 (715)
432 3cky_A 2-hydroxymethyl glutara 95.5 0.013 4.3E-07 48.1 4.5 34 20-53 5-38 (301)
433 4ffl_A PYLC; amino acid, biosy 95.5 0.016 5.6E-07 48.9 5.2 34 20-53 2-35 (363)
434 2vdc_G Glutamate synthase [NAD 95.5 0.016 5.6E-07 50.6 5.3 36 18-53 263-299 (456)
435 2egg_A AROE, shikimate 5-dehyd 95.5 0.017 5.7E-07 47.5 5.1 34 19-52 141-175 (297)
436 1oju_A MDH, malate dehydrogena 95.5 0.013 4.4E-07 48.1 4.3 32 21-52 2-35 (294)
437 3ew7_A LMO0794 protein; Q8Y8U8 95.4 0.019 6.4E-07 44.5 5.1 33 21-53 2-35 (221)
438 2i6t_A Ubiquitin-conjugating e 95.4 0.014 4.6E-07 48.2 4.4 33 20-52 15-49 (303)
439 2cvz_A Dehydrogenase, 3-hydrox 95.4 0.013 4.5E-07 47.6 4.3 32 21-53 3-34 (289)
440 2q3e_A UDP-glucose 6-dehydroge 95.4 0.012 4E-07 51.7 4.2 34 20-53 6-41 (467)
441 3o0h_A Glutathione reductase; 95.4 0.016 5.6E-07 50.9 5.2 35 19-53 191-225 (484)
442 1pgj_A 6PGDH, 6-PGDH, 6-phosph 95.4 0.016 5.6E-07 50.9 5.0 32 21-52 3-34 (478)
443 3vps_A TUNA, NAD-dependent epi 95.4 0.021 7E-07 47.0 5.3 35 19-53 7-42 (321)
444 3nep_X Malate dehydrogenase; h 95.3 0.016 5.4E-07 48.0 4.4 32 21-52 2-35 (314)
445 1y56_A Hypothetical protein PH 95.3 0.049 1.7E-06 48.1 7.9 47 141-188 269-315 (493)
446 4aj2_A L-lactate dehydrogenase 95.3 0.022 7.5E-07 47.5 5.3 35 18-52 18-54 (331)
447 2ahr_A Putative pyrroline carb 95.3 0.019 6.4E-07 46.0 4.8 33 20-52 4-36 (259)
448 1p77_A Shikimate 5-dehydrogena 95.3 0.015 5.1E-07 47.1 4.2 34 19-52 119-152 (272)
449 1np3_A Ketol-acid reductoisome 95.3 0.021 7E-07 47.9 5.1 33 20-52 17-49 (338)
450 3h5n_A MCCB protein; ubiquitin 95.3 0.016 5.6E-07 48.8 4.5 36 19-54 118-154 (353)
451 1pjq_A CYSG, siroheme synthase 95.3 0.018 6.2E-07 50.3 4.9 35 18-52 11-45 (457)
452 3ojo_A CAP5O; rossmann fold, c 95.3 0.015 5.1E-07 50.3 4.3 34 20-53 12-45 (431)
453 3don_A Shikimate dehydrogenase 95.2 0.018 6.2E-07 46.7 4.5 36 18-53 116-152 (277)
454 1o5i_A 3-oxoacyl-(acyl carrier 95.2 0.028 9.5E-07 44.8 5.5 36 17-52 17-53 (249)
455 3fi9_A Malate dehydrogenase; s 95.2 0.025 8.6E-07 47.4 5.3 34 19-52 8-44 (343)
456 3h2s_A Putative NADH-flavin re 95.2 0.024 8.2E-07 44.0 5.0 33 21-53 2-35 (224)
457 3sx6_A Sulfide-quinone reducta 95.2 0.068 2.3E-06 46.3 8.3 40 142-184 221-267 (437)
458 1b37_A Protein (polyamine oxid 95.2 0.05 1.7E-06 47.6 7.5 36 18-53 3-39 (472)
459 2hk9_A Shikimate dehydrogenase 95.2 0.018 6.1E-07 46.8 4.3 34 19-52 129-162 (275)
460 1d5t_A Guanine nucleotide diss 95.2 0.46 1.6E-05 41.0 13.5 36 18-53 5-40 (433)
461 3ond_A Adenosylhomocysteinase; 95.1 0.02 6.7E-07 50.2 4.6 35 18-52 264-298 (488)
462 2rir_A Dipicolinate synthase, 95.1 0.026 8.8E-07 46.4 5.2 35 18-52 156-190 (300)
463 3d4o_A Dipicolinate synthase s 95.1 0.026 9E-07 46.2 5.2 35 18-52 154-188 (293)
464 3orq_A N5-carboxyaminoimidazol 95.1 0.04 1.4E-06 46.8 6.5 36 18-53 11-46 (377)
465 3r6d_A NAD-dependent epimerase 95.1 0.034 1.2E-06 43.2 5.6 34 20-53 6-41 (221)
466 4b4o_A Epimerase family protei 95.1 0.025 8.7E-07 46.1 5.1 33 21-53 2-35 (298)
467 3qvo_A NMRA family protein; st 95.1 0.02 6.7E-07 45.1 4.1 36 18-53 22-59 (236)
468 3nrc_A Enoyl-[acyl-carrier-pro 95.1 0.025 8.6E-07 45.9 4.9 40 13-52 20-62 (280)
469 3vh1_A Ubiquitin-like modifier 95.0 0.031 1.1E-06 50.0 5.7 36 19-54 327-363 (598)
470 4gsl_A Ubiquitin-like modifier 95.0 0.024 8.3E-07 50.9 5.0 36 19-54 326-362 (615)
471 1i36_A Conserved hypothetical 95.0 0.02 7E-07 45.9 4.1 30 21-50 2-31 (264)
472 3h28_A Sulfide-quinone reducta 95.0 0.07 2.4E-06 46.1 7.8 41 142-185 213-255 (430)
473 1edz_A 5,10-methylenetetrahydr 95.0 0.025 8.4E-07 46.8 4.6 35 18-52 176-211 (320)
474 1nvt_A Shikimate 5'-dehydrogen 94.9 0.025 8.7E-07 46.1 4.6 33 19-52 128-160 (287)
475 2zqz_A L-LDH, L-lactate dehydr 94.9 0.027 9.2E-07 46.9 4.8 35 18-52 8-44 (326)
476 2jae_A L-amino acid oxidase; o 94.9 0.05 1.7E-06 47.8 6.8 36 18-53 10-45 (489)
477 4e4t_A Phosphoribosylaminoimid 94.9 0.038 1.3E-06 47.7 5.9 36 17-52 33-68 (419)
478 3q2o_A Phosphoribosylaminoimid 94.9 0.04 1.4E-06 47.0 6.0 36 18-53 13-48 (389)
479 3i6i_A Putative leucoanthocyan 94.9 0.031 1E-06 46.7 5.2 34 19-52 10-44 (346)
480 1n7h_A GDP-D-mannose-4,6-dehyd 94.9 0.031 1E-06 47.4 5.2 34 20-53 29-63 (381)
481 2pd4_A Enoyl-[acyl-carrier-pro 94.9 0.035 1.2E-06 44.8 5.3 35 18-52 5-42 (275)
482 3tnl_A Shikimate dehydrogenase 94.9 0.034 1.2E-06 46.0 5.2 34 18-51 153-187 (315)
483 2pzm_A Putative nucleotide sug 94.9 0.042 1.4E-06 45.5 5.9 35 18-52 19-54 (330)
484 2x6t_A ADP-L-glycero-D-manno-h 94.9 0.031 1.1E-06 46.8 5.1 36 18-53 45-82 (357)
485 3jyo_A Quinate/shikimate dehyd 94.9 0.034 1.2E-06 45.3 5.1 35 18-52 126-161 (283)
486 3b1f_A Putative prephenate deh 94.9 0.024 8.2E-07 46.2 4.3 33 20-52 7-41 (290)
487 3slg_A PBGP3 protein; structur 94.9 0.027 9.2E-07 47.5 4.7 40 14-53 19-60 (372)
488 3dhn_A NAD-dependent epimerase 94.8 0.027 9.3E-07 43.8 4.4 34 20-53 5-39 (227)
489 1yb4_A Tartronic semialdehyde 94.8 0.018 6E-07 47.1 3.4 32 20-52 4-35 (295)
490 4gx0_A TRKA domain protein; me 94.8 0.03 1E-06 50.3 5.1 35 20-54 349-383 (565)
491 3u62_A Shikimate dehydrogenase 94.8 0.034 1.2E-06 44.5 4.9 33 21-53 110-143 (253)
492 1leh_A Leucine dehydrogenase; 94.7 0.041 1.4E-06 46.5 5.5 34 18-51 172-205 (364)
493 2x4g_A Nucleoside-diphosphate- 94.7 0.04 1.4E-06 45.7 5.4 34 20-53 14-48 (342)
494 3o8q_A Shikimate 5-dehydrogena 94.7 0.041 1.4E-06 44.8 5.2 35 18-52 125-160 (281)
495 2b4q_A Rhamnolipids biosynthes 94.7 0.055 1.9E-06 43.8 6.0 36 17-52 27-63 (276)
496 4egb_A DTDP-glucose 4,6-dehydr 94.7 0.023 8E-07 47.3 3.9 37 16-52 21-60 (346)
497 3ce6_A Adenosylhomocysteinase; 94.7 0.03 1E-06 49.3 4.6 36 18-53 273-308 (494)
498 3pwz_A Shikimate dehydrogenase 94.7 0.041 1.4E-06 44.5 5.1 35 18-52 119-154 (272)
499 1ez4_A Lactate dehydrogenase; 94.7 0.035 1.2E-06 46.0 4.8 34 19-52 5-40 (318)
500 1tt5_B Ubiquitin-activating en 94.6 0.044 1.5E-06 47.5 5.5 36 19-54 40-76 (434)
No 1
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.98 E-value=2.5e-30 Score=225.65 Aligned_cols=232 Identities=22% Similarity=0.320 Sum_probs=171.8
Q ss_pred CCCCCCCcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhcc
Q 024233 12 NSDSENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGC 91 (270)
Q Consensus 12 ~~~~~~~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~ 91 (270)
+++..++++||+||||||+||++|+.|+++|++|+||||.+.... .+.++.+.+++.++|+++ ++++.+...+.
T Consensus 16 ~~~~~~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~----~~~~~~l~~~~~~~l~~l--g~~~~~~~~~~ 89 (407)
T 3rp8_A 16 ENLYFQGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKP----VGAAISVWPNGVKCMAHL--GMGDIMETFGG 89 (407)
T ss_dssp -------CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC--------CEEEECHHHHHHHHHT--TCHHHHHHHSC
T ss_pred CcccCCCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCC----cCeeEEECHHHHHHHHHC--CCHHHHHhhcC
Confidence 334445678999999999999999999999999999999865422 223688999999999999 88888887765
Q ss_pred ccCccccccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCeEEEEEcCCc
Q 024233 92 VTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQ 171 (270)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~~g~ 171 (270)
.... + .+.+...+.....++........+.+ .+.++|..|.+.|.+.+....++++++|++++.+++++.+++.+|+
T Consensus 90 ~~~~-~-~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~ 166 (407)
T 3rp8_A 90 PLRR-M-AYRDFRSGENMTQFSLAPLIERTGSR-PCPVSRAELQREMLDYWGRDSVQFGKRVTRCEEDADGVTVWFTDGS 166 (407)
T ss_dssp CCCE-E-EEEETTTCCEEEEEECHHHHHHHSSC-CEEEEHHHHHHHHHHHHCGGGEEESCCEEEEEEETTEEEEEETTSC
T ss_pred CCcc-e-EEEECCCCCEeEEecchhhhhhcCCc-eEEEEHHHHHHHHHHhCCcCEEEECCEEEEEEecCCcEEEEEcCCC
Confidence 4322 1 12332224444444322111111222 4789999999999999765459999999999999999999999999
Q ss_pred EEeccEEEecCCCCchhhccccCC-CCccccceEeEeeeecCCCcccccCceEEEeeCCceEEEEeCCCCeEEEEEEEeC
Q 024233 172 CYAGDLLVGADGIWSKVRKNLFGP-QEAIFSGYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFNKE 250 (270)
Q Consensus 172 ~~~ad~vI~AdG~~S~vr~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~ 250 (270)
+++||+||+|||.+|.+|+.+.+. ..+.+.++.++.+..+.............+++++++++++|+++++++|++....
T Consensus 167 ~~~a~~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 246 (407)
T 3rp8_A 167 SASGDLLIAADGSHSALRPWVLGFTPQRRYAGYVNWNGLVEIDEALAPGDQWTTFVGEGKQVSLMPVSAGRFYFFFDVPL 246 (407)
T ss_dssp EEEESEEEECCCTTCSSHHHHHSSCCCCEEEEEEEEEEEEECCTTTCCTTEEEEEEETTEEEEEEEETTTEEEEEEEEEC
T ss_pred EEeeCEEEECCCcChHHHHHhcCCCCCCcccCcEEEEEEEecccccCCCCceEEEECCCcEEEEEEcCCCeEEEEEEeCC
Confidence 999999999999999999999544 3677788888888765322223334456777899999999999999888888765
Q ss_pred CC
Q 024233 251 PA 252 (270)
Q Consensus 251 ~~ 252 (270)
+.
T Consensus 247 ~~ 248 (407)
T 3rp8_A 247 PA 248 (407)
T ss_dssp CT
T ss_pred Cc
Confidence 54
No 2
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.94 E-value=1.3e-25 Score=193.95 Aligned_cols=213 Identities=24% Similarity=0.248 Sum_probs=155.6
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCccc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 97 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~ 97 (270)
..+||+|||||++|+++|+.|+++|++|+|||+.+.... .+.++.+.+++.++|+++ ++++.+...+..... +
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~----~~~~~~l~~~~~~~l~~~--g~~~~~~~~~~~~~~-~ 82 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRA----FGAGIYLWHNGLRVLEGL--GALDDVLQGSHTPPT-Y 82 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCC----CSSEEEEEHHHHHHHHHT--TCHHHHHTTCBCCSC-E
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCC----CCceEEeCccHHHHHHHc--CCHHHHHhhCCCccc-e
Confidence 458999999999999999999999999999999865432 223688999999999999 788888765543221 1
Q ss_pred cccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCc--cEEeCceEEEEEecCCeEEEEEcCCcEEec
Q 024233 98 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDE--IILNESNVIDFKDHGDKVSVVLENGQCYAG 175 (270)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~--~i~~~~~v~~i~~~~~~~~v~~~~g~~~~a 175 (270)
.+... +.....++.. +.+ .+.++|..|.+.|.+.+... .++++++|++++. ++ .+++.+|++++|
T Consensus 83 -~~~~~--g~~~~~~~~~------~~~-~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~-~v~~~~g~~~~a 149 (379)
T 3alj_A 83 -ETWMH--NKSVSKETFN------GLP-WRIMTRSHLHDALVNRARALGVDISVNSEAVAADP--VG-RLTLQTGEVLEA 149 (379)
T ss_dssp -EEEET--TEEEEEECGG------GCC-EEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET--TT-EEEETTSCEEEC
T ss_pred -EEEeC--CceeeeccCC------CCc-eEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC-EEEECCCCEEEc
Confidence 12221 3333222211 234 48999999999998886321 3899999999987 34 788888989999
Q ss_pred cEEEecCCCCchhhccccCCCCccccceEeEeeeecCC----CcccccCceEE--EeeCCceEEEEeCCCCeEEEEEEEe
Q 024233 176 DLLVGADGIWSKVRKNLFGPQEAIFSGYTCYTGIADFV----PADIESVGYRV--FLGHKQYFVSSDVGAGKMQWYAFNK 249 (270)
Q Consensus 176 d~vI~AdG~~S~vr~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~--~~~~~~~~~~~p~~~g~~~~~~~~~ 249 (270)
|+||+|||.+|.+|+.+.....+.+.++.++.+.++.. +.........+ +++++++++++|+++++++|++...
T Consensus 150 d~vV~AdG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 229 (379)
T 3alj_A 150 DLIVGADGVGSKVRDSIGFKQDRWVSKDGLIRLIVPRMKKELGHGEWDNTIDMWNFWPRVQRILYSPCNENELYLGLMAP 229 (379)
T ss_dssp SEEEECCCTTCHHHHHHCCCEEEEEEEEEEEEEEEECCHHHHCSSCTTSEEEEECCSSSCCEEEEEECSSSEEEEEEEEC
T ss_pred CEEEECCCccHHHHHHhcCCCCcCcCCcEEEEEEechhhccCCcCCcccccccceEECCCCEEEEEECCCCcEEEEEEec
Confidence 99999999999999988654455666777777766542 22111112233 5678999999999999988887765
Q ss_pred C
Q 024233 250 E 250 (270)
Q Consensus 250 ~ 250 (270)
.
T Consensus 230 ~ 230 (379)
T 3alj_A 230 A 230 (379)
T ss_dssp T
T ss_pred C
Confidence 4
No 3
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.94 E-value=2.9e-25 Score=192.97 Aligned_cols=214 Identities=20% Similarity=0.274 Sum_probs=152.1
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCccc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 97 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~ 97 (270)
.++||+|||||++|+++|+.|+++|++|+|||+.+..... .++++.+.+++.++|+++ ++++ ....... ...
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~---~~~g~~l~~~~~~~l~~~--g~~~--~~~~~~~-~~~ 75 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSG---FGTGIVVQPELVHYLLEQ--GVEL--DSISVPS-SSM 75 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCC---CSCEEECCHHHHHHHHHT--TCCG--GGTCBCC-CEE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCc---cccccccChhHHHHHHHc--CCcc--ccccccc-cce
Confidence 4579999999999999999999999999999998653222 224678999999999999 4443 2222111 111
Q ss_pred cccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCeEEEEEcCCcEEeccE
Q 024233 98 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDL 177 (270)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~ad~ 177 (270)
.+.+...+......+ .+. ..+++..+.+.|.+.+....++++++|++++.+++++++++.+|++++||+
T Consensus 76 -~~~~~~~g~~~~~~~---------~~~-~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~ 144 (397)
T 2vou_A 76 -EYVDALTGERVGSVP---------ADW-RFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANW 144 (397)
T ss_dssp -EEEETTTCCEEEEEE---------CCC-CEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSCEEEEETTSCEEEESE
T ss_pred -EEEecCCCCcccccc---------Ccc-cccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCE
Confidence 122211222222211 111 247889999999998754449999999999999899999999999999999
Q ss_pred EEecCCCCchhhccccCCCCccccceEeEeeeecCCCcccc-----cCceEEEeeCCceEEEEeCCCC------eEEEEE
Q 024233 178 LVGADGIWSKVRKNLFGPQEAIFSGYTCYTGIADFVPADIE-----SVGYRVFLGHKQYFVSSDVGAG------KMQWYA 246 (270)
Q Consensus 178 vI~AdG~~S~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~p~~~g------~~~~~~ 246 (270)
||+|||.+|.+|+.+. ...+.+.++.+|.+++........ ...+.+++++++++.++|++++ ++.|++
T Consensus 145 vV~AdG~~S~vr~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 223 (397)
T 2vou_A 145 VIGADGGASVVRKRLL-GIEPTYAGYVTWRGVLQPGEVADDVWNYFNDKFTYGLLDDGHLIAYPIPGRENAESPRLNFQW 223 (397)
T ss_dssp EEECCCTTCHHHHHHH-CCCCEEEEEEEEEEEECTTSSCHHHHHHHTTEEEEEEETTEEEEEEEECCSSTTSCCEEEEEE
T ss_pred EEECCCcchhHHHHhc-cCCCCccceEEEEEEeeccccChhhhhhhcCceeEEecCCCEEEEEECCCCCCccceeEEEEE
Confidence 9999999999999997 556777788888887653211111 1235566788888999998864 555655
Q ss_pred EEeCC
Q 024233 247 FNKEP 251 (270)
Q Consensus 247 ~~~~~ 251 (270)
+...+
T Consensus 224 ~~~~~ 228 (397)
T 2vou_A 224 YWNVA 228 (397)
T ss_dssp EEECC
T ss_pred EecCC
Confidence 55433
No 4
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.94 E-value=5.2e-25 Score=191.43 Aligned_cols=228 Identities=17% Similarity=0.216 Sum_probs=159.0
Q ss_pred CCCCCCCcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeech-hHHHHHHHcCcChHHHHHHhc
Q 024233 12 NSDSENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQS-NALAALEAIDLDVAEEVMRAG 90 (270)
Q Consensus 12 ~~~~~~~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~-~~~~~l~~~~~~~~~~l~~~~ 90 (270)
+.|..+.++||+|||||++|+++|+.|+++|++|+||||.+..... ..++.+.+.+ ++.++|+++ ++++.+....
T Consensus 19 ~~M~~~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~--~~g~~~~~~~~~~~~~l~~~--gl~~~~~~~~ 94 (398)
T 2xdo_A 19 SHMNLLSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREAR--IFGGTLDLHKGSGQEAMKKA--GLLQTYYDLA 94 (398)
T ss_dssp ----CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCC--CCSCCEECCTTTHHHHHHHT--TCHHHHHHHC
T ss_pred ccccccCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCcccc--ccCCeeeeCCccHHHHHHhc--ChHHHHHHhh
Confidence 3455556789999999999999999999999999999998653221 1223566665 568999999 8888887665
Q ss_pred cccCccccccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCeEEEEEcCC
Q 024233 91 CVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENG 170 (270)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~~g 170 (270)
..... .+.+ ..+....... ........ ...++|..|.+.|.+.+....++++++|++++.+++++++++.+|
T Consensus 95 ~~~~~---~~~~-~~g~~~~~~~-~~~~~~~~---~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g 166 (398)
T 2xdo_A 95 LPMGV---NIAD-EKGNILSTKN-VKPENRFD---NPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKKKWTLTFENK 166 (398)
T ss_dssp BCCCE---EEEC-SSSEEEEECC-CGGGTTSS---CCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECSSSEEEEETTS
T ss_pred cccce---EEEC-CCCCchhhcc-ccccCCCC---CceECHHHHHHHHHhhcCCCEEEECCEEEEEEECCCEEEEEECCC
Confidence 43322 1222 2233222220 00001111 236899999999999875445899999999999888899999999
Q ss_pred cEEeccEEEecCCCCchhhccccCCCCccccceEeEeeeecCCC---ccc---ccCceEEEeeCCceEEEEeCCCCeEEE
Q 024233 171 QCYAGDLLVGADGIWSKVRKNLFGPQEAIFSGYTCYTGIADFVP---ADI---ESVGYRVFLGHKQYFVSSDVGAGKMQW 244 (270)
Q Consensus 171 ~~~~ad~vI~AdG~~S~vr~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~p~~~g~~~~ 244 (270)
++++||+||+|||.+|.+|+.+. ...+.+.+..++.+.+.... +.. ......++++++..++++|.++++++|
T Consensus 167 ~~~~ad~vV~AdG~~S~vR~~l~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~ 245 (398)
T 2xdo_A 167 PSETADLVILANGGMSKVRKFVT-DTEVEETGTFNIQADIHQPEINCPGFFQLCNGNRLMASHQGNLLFANPNNNGALHF 245 (398)
T ss_dssp CCEEESEEEECSCTTCSCCTTTC-CCCCEEEEEEEEEEEESSHHHHSHHHHHHHTTSEEEEEETTEEEEEEEEETTEEEE
T ss_pred cEEecCEEEECCCcchhHHhhcc-CCCceEcceEEEEEEeCchhccCchhHhhcCCceEEEecCCCeEEEEeCCCCcEEE
Confidence 89999999999999999999874 34566777777766654211 000 112234556788888889999999888
Q ss_pred EEEEeCCC
Q 024233 245 YAFNKEPA 252 (270)
Q Consensus 245 ~~~~~~~~ 252 (270)
++....++
T Consensus 246 ~~~~~~~~ 253 (398)
T 2xdo_A 246 GISFKTPD 253 (398)
T ss_dssp EEEEECCT
T ss_pred EEEEecCc
Confidence 87765554
No 5
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.94 E-value=1.1e-25 Score=195.80 Aligned_cols=185 Identities=24% Similarity=0.275 Sum_probs=130.7
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHh---ccccCcc
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRA---GCVTGDR 96 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~---~~~~~~~ 96 (270)
.+|+||||||+||++|+.|+++|++|+||||.+.+.... .+.++.++++++++|+++ ++.+.+... .......
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~--~G~~i~l~~~~~~~L~~l--g~~~~~~~~~~~~~~~~~~ 77 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSIL--PGYGIHINSFGKQALQEC--LPAENWLAFEEASRYIGGQ 77 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSC--CCCEEEECHHHHHHHHHH--SCHHHHHHHHHHCEEECCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCC--CceEEeeCHHHHHHHHHc--CChHHHHHhhhhhcccCcc
Confidence 589999999999999999999999999999986543221 123688999999999999 555554332 2111111
Q ss_pred ccccccCCCCceeEeecCCc-cc-ccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecC-CeEEEEEcCCcEE
Q 024233 97 INGLVDGISGSWYIKFDTFT-PA-AEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHG-DKVSVVLENGQCY 173 (270)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~-~~~~v~~~~g~~~ 173 (270)
. .+.. ............. .. ...+.+ ...++|..|.+.|.+.++.. ++++++|++++..+ ++++++++||+++
T Consensus 78 ~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~i~R~~L~~~L~~~~~~~-v~~~~~v~~~~~~~~~~v~v~~~dG~~~ 153 (412)
T 4hb9_A 78 S-RFYN-ERMRLLAVHGGISPMAGKIISEQ-RLSISRTELKEILNKGLANT-IQWNKTFVRYEHIENGGIKIFFADGSHE 153 (412)
T ss_dssp C-EEEC-TTSCEEEC--------------C-EEEEEHHHHHHHHHTTCTTT-EECSCCEEEEEECTTSCEEEEETTSCEE
T ss_pred e-eEec-CCcceecccCCcccccccccccc-ceEeeHHHHHHHHHhhccce-EEEEEEEEeeeEcCCCeEEEEECCCCEE
Confidence 1 0111 1111111111000 00 111222 36799999999999998776 99999999998754 4689999999999
Q ss_pred eccEEEecCCCCchhhccccCCCCccccceEeEeeeecC
Q 024233 174 AGDLLVGADGIWSKVRKNLFGPQEAIFSGYTCYTGIADF 212 (270)
Q Consensus 174 ~ad~vI~AdG~~S~vr~~~~~~~~~~~~~~~~~~~~~~~ 212 (270)
+||+||+|||.+|.+|+++.+...+.+.++.++.+....
T Consensus 154 ~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~ 192 (412)
T 4hb9_A 154 NVDVLVGADGSNSKVRKQYLPFIERFDVGVSMIIGRARL 192 (412)
T ss_dssp EESEEEECCCTTCHHHHHHSTTCCCEEEEEEEEEEEEEC
T ss_pred EeeEEEECCCCCcchHHHhCCCccccccceeEEEEEEec
Confidence 999999999999999999987777777787777776543
No 6
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.94 E-value=6.8e-25 Score=195.71 Aligned_cols=210 Identities=17% Similarity=0.166 Sum_probs=147.1
Q ss_pred CCcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcc
Q 024233 17 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 96 (270)
Q Consensus 17 ~~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~ 96 (270)
++.+||+||||||+||++|+.|+++|++|+||||.+..... ..++.++++++++|+++ ++++.+.+. ....
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~----~r~~~l~~~~~~~l~~l--Gl~~~~~~~-~~~~-- 80 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGE----SRGLGFTARTMEVFDQR--GILPAFGPV-ETST-- 80 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCC----CCSEEECHHHHHHHHHT--TCGGGGCSC-CEES--
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCC----CceeEECHHHHHHHHHC--CCHHHHHhc-cccc--
Confidence 35689999999999999999999999999999998654322 23678999999999999 666665443 1100
Q ss_pred ccccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhc---CCccEEeCceEEEEEecCCeEEEEEcCCc--
Q 024233 97 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDHGDKVSVVLENGQ-- 171 (270)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~~~v~~~~g~-- 171 (270)
.. .. .+. ..... ......+....++|..+.+.|.+.+ +.. ++++++|++++.+++++++++.++.
T Consensus 81 ~~-~~---~~~-~~~~~----~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~-v~~~~~v~~i~~~~~~v~v~~~~~~g~ 150 (499)
T 2qa2_A 81 QG-HF---GGR-PVDFG----VLEGAHYGVKAVPQSTTESVLEEWALGRGAE-LLRGHTVRALTDEGDHVVVEVEGPDGP 150 (499)
T ss_dssp EE-EE---TTE-EEEGG----GSTTCCCEEEEEEHHHHHHHHHHHHHHTTCE-EEESCEEEEEEECSSCEEEEEECSSCE
T ss_pred cc-ee---cce-ecccc----cCCCCCCceEecCHHHHHHHHHHHHHhCCCE-EEcCCEEEEEEEeCCEEEEEEEcCCCc
Confidence 00 00 111 11111 1112345568999999999999875 344 9999999999999999999988775
Q ss_pred -EEeccEEEecCCCCchhhccccCCCCccccceEeEeeeecCCCcccccCceEEEeeCCceEEEEeCCCCeEEEEEEE
Q 024233 172 -CYAGDLLVGADGIWSKVRKNLFGPQEAIFSGYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFN 248 (270)
Q Consensus 172 -~~~ad~vI~AdG~~S~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~ 248 (270)
+++||+||+|||.+|.+|+.+..........+..+.+.+... ..+ ....+++.++++++++|+++|.+++++..
T Consensus 151 ~~~~a~~vVgADG~~S~VR~~lg~~~~~~~~~~~~~~~~v~~~-~~~--~~~~~~~~~~g~~~~~P~~~g~~~~~~~~ 225 (499)
T 2qa2_A 151 RSLTTRYVVGCDGGRSTVRKAAGFDFPGTSASREMFLADIRGC-EIT--PRPIGETVPLGMVMSAPLGDGVDRIIVCE 225 (499)
T ss_dssp EEEEEEEEEECCCTTCHHHHHTTCCCCEECCCCCEEEEEEESC-CCC--CEEEEEEETTEEEEEEECSSSCEEEEEEE
T ss_pred EEEEeCEEEEccCcccHHHHHcCCCCCCCCCccEEEEEEEEEC-CCC--cceEEEECCCeEEEEEEcCCCEEEEEEEe
Confidence 899999999999999999988322121122233344433321 111 12455678899999999999987766654
No 7
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.94 E-value=7.6e-25 Score=195.45 Aligned_cols=211 Identities=16% Similarity=0.172 Sum_probs=147.1
Q ss_pred CCCcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCc
Q 024233 16 ENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGD 95 (270)
Q Consensus 16 ~~~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~ 95 (270)
.++.+||+||||||+||++|+.|+++|++|+||||.+..... ..++.++++++++|+++ ++++.+.+. ...
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~----~r~~~l~~~~~~~l~~l--Gl~~~~~~~-~~~-- 78 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGE----SRGLGFTARTMEVFDQR--GILPRFGEV-ETS-- 78 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCC----CCSEEECHHHHHHHHTT--TCGGGGCSC-CBC--
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCC----CCcceECHHHHHHHHHC--CCHHHHHhc-ccc--
Confidence 346689999999999999999999999999999998654322 23678999999999998 666666443 110
Q ss_pred cccccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhc---CCccEEeCceEEEEEecCCeEEEEEcCCc-
Q 024233 96 RINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDHGDKVSVVLENGQ- 171 (270)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~~~v~~~~g~- 171 (270)
....+ .+. ...... .....+..+.++|..+.+.|.+.+ +.. ++++++|++++.+++++++++.++.
T Consensus 79 ~~~~~----~~~-~~~~~~----~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~-v~~~~~v~~i~~~~~~v~v~~~~~~g 148 (500)
T 2qa1_A 79 TQGHF----GGL-PIDFGV----LEGAWQAAKTVPQSVTETHLEQWATGLGAD-IRRGHEVLSLTDDGAGVTVEVRGPEG 148 (500)
T ss_dssp CEEEE----TTE-EEEGGG----STTGGGCEEEEEHHHHHHHHHHHHHHTTCE-EEETCEEEEEEEETTEEEEEEEETTE
T ss_pred ccccc----cce-eccccc----CCCCCCceeecCHHHHHHHHHHHHHHCCCE-EECCcEEEEEEEcCCeEEEEEEcCCC
Confidence 00000 111 111111 111234468999999999998875 444 9999999999999999999888775
Q ss_pred --EEeccEEEecCCCCchhhccccCCCCccccceEeEeeeecCCCcccccCceEEEeeCCceEEEEeCCCCeEEEEEEE
Q 024233 172 --CYAGDLLVGADGIWSKVRKNLFGPQEAIFSGYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFN 248 (270)
Q Consensus 172 --~~~ad~vI~AdG~~S~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~ 248 (270)
+++||+||+|||.+|.+|+.+..........+..+.+.+... ..+ ....+++.++++++++|+++|.+++++..
T Consensus 149 ~~~~~a~~vVgADG~~S~VR~~lg~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~g~~~~~p~~~g~~~~~~~~ 224 (500)
T 2qa1_A 149 KHTLRAAYLVGCDGGRSSVRKAAGFDFPGTAATMEMYLADIKGV-ELQ--PRMIGETLPGGMVMVGPLPGGITRIIVCE 224 (500)
T ss_dssp EEEEEESEEEECCCTTCHHHHHTTCCCCEECCCCEEEEEEEESC-CCC--CEEEEEEETTEEEEEEEETTTEEEEEEEE
T ss_pred CEEEEeCEEEECCCcchHHHHHcCCCcCCCccceEEEEEEEEeC-CCC--CceEEEECCCcEEEEEEcCCCEEEEEEEc
Confidence 799999999999999999988322222222233444443321 111 12456677899999999999987666554
No 8
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.94 E-value=5e-25 Score=191.55 Aligned_cols=214 Identities=19% Similarity=0.252 Sum_probs=154.9
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCccc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 97 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~ 97 (270)
.++||+|||||++|+++|+.|+++|++|+|||+.+... . .+.++.+.+++.++|+++ ++++.+......... +
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~-~---~~~~~~l~~~~~~~l~~~--g~~~~~~~~~~~~~~-~ 77 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRER-A---INGADLLKPAGIRVVEAA--GLLAEVTRRGGRVRH-E 77 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC-------CCCCEECHHHHHHHHHT--TCHHHHHHTTCEEEC-E
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCC-c---cCceeeECchHHHHHHHc--CcHHHHHHhCCCcce-e
Confidence 45899999999999999999999999999999986431 1 223578999999999999 788888755433211 1
Q ss_pred cccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCC--c-cEEeCceEEEEEecCCeE--EEEEcCCcE
Q 024233 98 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGD--E-IILNESNVIDFKDHGDKV--SVVLENGQC 172 (270)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~--~-~i~~~~~v~~i~~~~~~~--~v~~~~g~~ 172 (270)
. +.. ..+.....++..... ..+.++.++|..|.+.|.+.+.. . .++++++|++++.+++++ .+++.+|++
T Consensus 78 ~-~~~-~~g~~~~~~~~~~~~---~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~ 152 (399)
T 2x3n_A 78 L-EVY-HDGELLRYFNYSSVD---ARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRV 152 (399)
T ss_dssp E-EEE-ETTEEEEEEETTSSC---GGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCE
T ss_pred E-EEe-CCCCEEEecchHHhc---ccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCE
Confidence 1 111 123223333221110 11235789999999999998643 2 488999999999988888 899999989
Q ss_pred EeccEEEecCCCCchhhccccCCCCcc--ccce--EeEeeeecCCCcccccCceEEEeeC-CceEEEEeCCCCeEEEEEE
Q 024233 173 YAGDLLVGADGIWSKVRKNLFGPQEAI--FSGY--TCYTGIADFVPADIESVGYRVFLGH-KQYFVSSDVGAGKMQWYAF 247 (270)
Q Consensus 173 ~~ad~vI~AdG~~S~vr~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~g~~~~~~~ 247 (270)
++||+||+|||.+|.+|+.+.....+. +.++ .++.+.++.. .+.. . +++++ +++++++|++++++.|++.
T Consensus 153 ~~ad~vV~AdG~~s~vr~~lg~~~~~~~p~~~~~~~~~~~~~~~~--~~~~--~-~~~~~~~~~~~~~p~~~~~~~~~~~ 227 (399)
T 2x3n_A 153 LRPRVVVGADGIASYVRRRLLDIDVERRPYPSPMLVGTFALAPCV--AERN--R-LYVDSQGGLAYFYPIGFDRARLVVS 227 (399)
T ss_dssp EEEEEEEECCCTTCHHHHHTSCCCCCCCCCSSCEEEEEEECCHHH--HHCE--E-EEECTTSCEEEEEEETTTEEEEEEE
T ss_pred EECCEEEECCCCChHHHHHhCCCccccCCCCCCceEEEEEEecCC--CCCc--c-EEEcCCCcEEEEEEcCCCEEEEEEE
Confidence 999999999999999999874333334 5556 6666654321 1111 3 67788 9999999999988888775
Q ss_pred E
Q 024233 248 N 248 (270)
Q Consensus 248 ~ 248 (270)
.
T Consensus 228 ~ 228 (399)
T 2x3n_A 228 F 228 (399)
T ss_dssp C
T ss_pred e
Confidence 4
No 9
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.93 E-value=2.5e-25 Score=201.15 Aligned_cols=216 Identities=19% Similarity=0.214 Sum_probs=140.9
Q ss_pred CCcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcc
Q 024233 17 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 96 (270)
Q Consensus 17 ~~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~ 96 (270)
.+.+||+||||||+||++|+.|+++|++|+||||.+.+... ..++.+.++++++|+++ ++++.+...+......
T Consensus 47 ~~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~----~r~~~l~~~s~~~l~~l--Gl~~~l~~~~~~~~~~ 120 (570)
T 3fmw_A 47 ALTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGH----DRAGALHIRTVETLDLR--GLLDRFLEGTQVAKGL 120 (570)
T ss_dssp ----CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCS----SSCCCBCHHHHHHHHTT--TCHHHHTTSCCBCSBC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCC----ceEEEECHHHHHHHHHc--CChHHHHhcCcccCCc
Confidence 35689999999999999999999999999999998654322 23578999999999999 8899887766433211
Q ss_pred ccccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhc---CCccEEeCceEEEEEecCCeEEEEE--cCC-
Q 024233 97 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDHGDKVSVVL--ENG- 170 (270)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~~~v~~--~~g- 170 (270)
. ....... ...+. ......+..+.+++..+.+.|.+.+ +.. ++++++|++++.+++++++++ .+|
T Consensus 121 ~---~~~~~~~-~~~~~----~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~-i~~~~~v~~l~~~~~~v~v~~~~~~G~ 191 (570)
T 3fmw_A 121 P---FAGIFTQ-GLDFG----LVDTRHPYTGLVPQSRTEALLAEHAREAGAE-IPRGHEVTRLRQDAEAVEVTVAGPSGP 191 (570)
T ss_dssp C---BTTBCTT-CCBGG----GSCCSCCSBBCCCHHHHHHHHHHHHHHHTEE-CCBSCEEEECCBCSSCEEEEEEETTEE
T ss_pred e---eCCcccc-ccccc----ccCCCCCeeEEeCHHHHHHHHHHHHHhCCCE-EEeCCEEEEEEEcCCeEEEEEEeCCCc
Confidence 0 0000000 01111 1112234457899999999999875 334 889999999999999988887 677
Q ss_pred cEEeccEEEecCCCCchhhccccCCCCccccceEeEeeeecCCCcccccCceEEEeeCCceEEE-EeCCCCeE-EEEEEE
Q 024233 171 QCYAGDLLVGADGIWSKVRKNLFGPQEAIFSGYTCYTGIADFVPADIESVGYRVFLGHKQYFVS-SDVGAGKM-QWYAFN 248 (270)
Q Consensus 171 ~~~~ad~vI~AdG~~S~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~g~~-~~~~~~ 248 (270)
++++||+||+|||.+|.+|+.+..........+.++...+...... ....+.+.+.+++++ +|+++|.. +|++..
T Consensus 192 ~~~~a~~vV~ADG~~S~vR~~lGi~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~~~~G~~~~~~P~~~g~~~~i~~~~ 268 (570)
T 3fmw_A 192 YPVRARYGVGCDGGRSTVRRLAADRFPGTEATVRALIGYVTTPERE---VPRRWERTPDGILVLAFPPEGGLGPGWSSSS 268 (570)
T ss_dssp EEEEESEEEECSCSSCHHHHHTTCCCCCCCCCEEEEEEECCCCSCS---SCCCCCCCCSSCEEECCCC------CEEEEE
T ss_pred EEEEeCEEEEcCCCCchHHHHcCCCCccceeeeEEEEEEEEecCCC---cceEEEecCCEEEEEEeecCCCeEEEEEEEe
Confidence 6899999999999999999988322121222233333333321111 112223557777777 89999976 666555
Q ss_pred eC
Q 024233 249 KE 250 (270)
Q Consensus 249 ~~ 250 (270)
..
T Consensus 269 ~~ 270 (570)
T 3fmw_A 269 TG 270 (570)
T ss_dssp ES
T ss_pred CC
Confidence 43
No 10
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.93 E-value=5e-24 Score=193.15 Aligned_cols=226 Identities=14% Similarity=0.141 Sum_probs=152.5
Q ss_pred CCcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcc
Q 024233 17 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 96 (270)
Q Consensus 17 ~~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~ 96 (270)
++.+||+|||||++|+++|+.|+++|++|+|||+.+.+.... +..+.+.+..+++.+ ++++.+..........
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~-----G~~l~p~~~~~l~~l--Gl~~~l~~~~~~~~~~ 93 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRV-----GESLLPGTMSILNRL--GLQEKIDAQNYVKKPS 93 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCC-----CCBCCHHHHHHHHHT--TCHHHHHHHCCEEECE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCce-----eeeECHHHHHHHHHc--CCcHHHHhcCCcccCC
Confidence 456899999999999999999999999999999986543333 366889999999999 8888887766443222
Q ss_pred ccccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhc---CCccEEeCceEEEEEec-CCeEEEEEc-CC-
Q 024233 97 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDH-GDKVSVVLE-NG- 170 (270)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~---~~~~i~~~~~v~~i~~~-~~~~~v~~~-~g- 170 (270)
....+..........+.... ......+.++.++|..+.+.|.+.+ +.. ++++++|+++..+ ++.+.|.+. +|
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~-i~~g~~V~~v~~~~g~~~~V~~~~~G~ 171 (591)
T 3i3l_A 94 ATFLWGQDQAPWTFSFAAPK-VAPWVFDHAVQVKREEFDKLLLDEARSRGIT-VHEETPVTDVDLSDPDRVVLTVRRGGE 171 (591)
T ss_dssp EEEECSSSCCCEEEECCCC---CTTCCSCEEECCHHHHHHHHHHHHHHTTCE-EETTCCEEEEECCSTTCEEEEEEETTE
T ss_pred cEEEecCCCccceeeccccc-ccccccCeeEEEcHHHHHHHHHHHHHhCCCE-EEeCCEEEEEEEcCCCEEEEEEecCCc
Confidence 22122111111111221111 1122455678999999999998875 334 8899999999875 556778776 66
Q ss_pred -cEEeccEEEecCCCCchhhccccCCCCccccceEeEeeeecC-CC-cccccCceEEEeeCCceEEEEeCCCCeEEEEEE
Q 024233 171 -QCYAGDLLVGADGIWSKVRKNLFGPQEAIFSGYTCYTGIADF-VP-ADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAF 247 (270)
Q Consensus 171 -~~~~ad~vI~AdG~~S~vr~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~ 247 (270)
.+++||+||+|||.+|.+|+.+............+...+... .+ ..+........+.+.++++++|++++.+.+.+.
T Consensus 172 ~~~i~AdlVV~AdG~~S~lr~~lg~~~~~~~~~~~av~~~~~~~~~~~~~~~~~~~~~~~~~G~~w~iPl~~~~~sv~~~ 251 (591)
T 3i3l_A 172 SVTVESDFVIDAGGSGGPISRKLGVRQYDEFYRNFAVWSYFKLKDPFEGDLKGTTYSITFEDGWVWMIPIKDDLYSVGLV 251 (591)
T ss_dssp EEEEEESEEEECCGGGCHHHHHHTCEEEEEEEEEEEEEEEEECCCSCCSTTTTCEEEEEETTEEEEEEECSSSEEEEEEE
T ss_pred eEEEEcCEEEECCCCcchhHHHcCCCCCCccccceEEEEEEecCccccCCCCCceEEEEcCCcEEEEEECCCCeEEEEEE
Confidence 579999999999999999998743222222222333333221 11 122233445566789999999999998777666
Q ss_pred EeCC
Q 024233 248 NKEP 251 (270)
Q Consensus 248 ~~~~ 251 (270)
....
T Consensus 252 ~~~~ 255 (591)
T 3i3l_A 252 VDRS 255 (591)
T ss_dssp EEGG
T ss_pred cCHH
Confidence 6543
No 11
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.93 E-value=1.2e-23 Score=183.58 Aligned_cols=218 Identities=28% Similarity=0.365 Sum_probs=152.0
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCc-EEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFE-VLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 96 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~-V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~ 96 (270)
.++||+||||||+||++|+.|+++|++ |+||||.+... . .+.++.+.+++.++|+++ ++++.+...+.....
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~-~---~g~g~~l~~~~~~~l~~l--g~~~~l~~~~~~~~~- 75 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIR-P---LGVGINIQPAAVEALAEL--GLGPALAATAIPTHE- 75 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCC-C---CSCEEEECHHHHHHHHHT--TCHHHHHHHSEEECE-
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcc-c---ceeEEEEChHHHHHHHHC--CChHHHHhhCCCcce-
Confidence 357999999999999999999999999 99999986432 2 223688999999999999 788888776543221
Q ss_pred ccccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhc----CCccEEeCceEEEEEecCCeEEEEEcC---
Q 024233 97 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV----GDEIILNESNVIDFKDHGDKVSVVLEN--- 169 (270)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~----~~~~i~~~~~v~~i~~~~~~~~v~~~~--- 169 (270)
+ .+.+ ..+......+.. .......+ ...++|..|.+.|.+.+ +...++++++|++++. ++++++.+.+
T Consensus 76 ~-~~~~-~~g~~~~~~~~~-~~~~~~~~-~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~v~v~~~~~~~ 150 (410)
T 3c96_A 76 L-RYID-QSGATVWSEPRG-VEAGNAYP-QYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDGRVLIGARDGH 150 (410)
T ss_dssp E-EEEC-TTSCEEEEEECG-GGGTCSSC-EEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETTEEEEEEEETT
T ss_pred E-EEEc-CCCCEEeeccCC-ccccCCCC-eeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCccEEEEecCCC
Confidence 1 1222 223333222211 11122333 47899999999998875 3224999999999998 7778888765
Q ss_pred C--cEEeccEEEecCCCCchhhccccCCC-CccccceEeEeeeecCCCcccccCceEEEeeC--CceEEEEeCCC-----
Q 024233 170 G--QCYAGDLLVGADGIWSKVRKNLFGPQ-EAIFSGYTCYTGIADFVPADIESVGYRVFLGH--KQYFVSSDVGA----- 239 (270)
Q Consensus 170 g--~~~~ad~vI~AdG~~S~vr~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~~~----- 239 (270)
| .+++||+||+|||.+|.+|+.+.... .+.+.+..+|+++....+. ......++++. +++++++|+++
T Consensus 151 g~~~~~~ad~vV~AdG~~S~vR~~l~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 228 (410)
T 3c96_A 151 GKPQALGADVLVGADGIHSAVRAHLHPDQRPLSHGGITMWRGVTEFDRF--LDGKTMIVANDEHWSRLVAYPISARHAAE 228 (410)
T ss_dssp SCEEEEEESEEEECCCTTCHHHHHHCTTCCCCEEEEEEEEEEEEEESCC--TTSSEEEEEECTTCCEEEEEECCHHHHTT
T ss_pred CCceEEecCEEEECCCccchhHHHhcCCCCCCCcCCeeEEEeecccccc--cCCCeEEEecCCCCcEEEEEecCCcccCC
Confidence 7 57999999999999999999985432 3566777777776543221 12223445553 67888999963
Q ss_pred C--eEEEEEEEe
Q 024233 240 G--KMQWYAFNK 249 (270)
Q Consensus 240 g--~~~~~~~~~ 249 (270)
| .++|.+...
T Consensus 229 g~~~~~w~~~~~ 240 (410)
T 3c96_A 229 GKSLVNWVCMVP 240 (410)
T ss_dssp TCEEEEEEEEEE
T ss_pred CCcEEEEEEEec
Confidence 4 366766554
No 12
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.92 E-value=1.9e-23 Score=188.59 Aligned_cols=222 Identities=18% Similarity=0.199 Sum_probs=146.1
Q ss_pred CCCCCCCCcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhc
Q 024233 11 NNSDSENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAG 90 (270)
Q Consensus 11 ~~~~~~~~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~ 90 (270)
...|..+..+||+||||||+||++|+.|+++|++|+||||.+.... ...+..+.++++++|+++ ++.+.+.+.+
T Consensus 18 ~~~M~~~~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~----~~~~~~l~~~~~~~l~~l--Gl~~~~~~~~ 91 (549)
T 2r0c_A 18 GSHMNAPIETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTIT----HPRVGTIGPRSMELFRRW--GVAKQIRTAG 91 (549)
T ss_dssp ----CCCEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCS----SCCCCEECHHHHHHHHHT--TCHHHHHTSS
T ss_pred hhhcCCCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCC----CCceeeeCHHHHHHHHHc--CChHHHHhhc
Confidence 3445555668999999999999999999999999999999865322 223577999999999999 7888887766
Q ss_pred cccCcccc-ccccCCCCceeEeecCCcccc-----cCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCeEE
Q 024233 91 CVTGDRIN-GLVDGISGSWYIKFDTFTPAA-----EKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVS 164 (270)
Q Consensus 91 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~ 164 (270)
........ .+.....+..+..++...... ....+ ...++|..+.+.|.+.+... ++++++|++++.++++++
T Consensus 92 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~l~~~L~~~a~~~-v~~~~~v~~~~~~~~~v~ 169 (549)
T 2r0c_A 92 WPGDHPLDAAWVTRVGGHEVYRIPLGTADTRATPEHTPEP-DAICPQHWLAPLLAEAVGER-LRTRSRLDSFEQRDDHVR 169 (549)
T ss_dssp CCTTSBCCEEEESSBTSCEEEEECCCBTTTSCCCSSCSSC-CEECCHHHHHHHHHHHHGGG-EECSEEEEEEEECSSCEE
T ss_pred CCcccccceEEeccCCCceeEeecccccccccccCCCCCc-ccccCHHHHHHHHHHHHHHh-cccCcEEEEEEEeCCEEE
Confidence 54321100 111112333333332211100 01122 37899999999999987766 999999999999999988
Q ss_pred EEEcC---C--cEEeccEEEecCCCCchhhccccC-CCCccccceEeEeeeecCCCc----ccccCceEEEeeCC-ceEE
Q 024233 165 VVLEN---G--QCYAGDLLVGADGIWSKVRKNLFG-PQEAIFSGYTCYTGIADFVPA----DIESVGYRVFLGHK-QYFV 233 (270)
Q Consensus 165 v~~~~---g--~~~~ad~vI~AdG~~S~vr~~~~~-~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~ 233 (270)
+++.+ | .+++||+||+|||.+|.+|+.+.. .....+.. ..+...+..... ........++++++ +.++
T Consensus 170 v~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 248 (549)
T 2r0c_A 170 ATITDLRTGATRAVHARYLVACDGASSPTRKALGIDAPPRHRTQ-VFRNILFRAPELRSLLGERAALFFFLMLSSSLRFP 248 (549)
T ss_dssp EEEEETTTCCEEEEEEEEEEECCCTTCHHHHHHTCCCCBSSCCE-EEEEEEEECTTHHHHHGGGCCSEEEEEEETTEEEE
T ss_pred EEEEECCCCCEEEEEeCEEEECCCCCcHHHHHcCCCCCCCcccc-eEEEEEEECCchHHhcCCCCceEEEEECCCCcEEE
Confidence 88765 6 479999999999999999998832 22122222 222223222100 00112234555677 7888
Q ss_pred EEeCCCCe
Q 024233 234 SSDVGAGK 241 (270)
Q Consensus 234 ~~p~~~g~ 241 (270)
++|++++.
T Consensus 249 ~~p~~~~~ 256 (549)
T 2r0c_A 249 LRALDGRG 256 (549)
T ss_dssp EEESSSSS
T ss_pred EEEECCCc
Confidence 99997654
No 13
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.92 E-value=1.7e-23 Score=187.44 Aligned_cols=223 Identities=15% Similarity=0.153 Sum_probs=149.2
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHH-HHHHcCcChHHHHHHhccccCcc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALA-ALEAIDLDVAEEVMRAGCVTGDR 96 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~-~l~~~~~~~~~~l~~~~~~~~~~ 96 (270)
.++||+|||||++|+++|+.|+++|++|+|||+.+.+.... +..+.+.... +++.+ ++++.+.+........
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~-----g~~~~~~~~~~~l~~l--gl~~~~~~~~~~~~~~ 78 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQI-----GESLLPATVHGICAML--GLTDEMKRAGFPIKRG 78 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCS-----CCBCCHHHHTTHHHHT--TCHHHHHTTTCCEECE
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCC-----CcccCcchHHHHHHHh--CcHHHHHHcCCccccC
Confidence 45899999999999999999999999999999996543333 2456666554 88888 7888877665432221
Q ss_pred ccccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhc---CCccEEeCceEEEEEecCCeE---EEEEcCC
Q 024233 97 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDHGDKV---SVVLENG 170 (270)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~~---~v~~~~g 170 (270)
....+......+...+... .....+..+.++|..+.+.|.+.+ +.. ++++++|+++..+++.+ .+...+|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~-i~~~~~V~~v~~~~~~v~gv~~~~~dG 154 (512)
T 3e1t_A 79 GTFRWGKEPEPWTFGFTRH---PDDPYGFAYQVERARFDDMLLRNSERKGVD-VRERHEVIDVLFEGERAVGVRYRNTEG 154 (512)
T ss_dssp EEEECSSCSSCEEEESSSS---SSSTTCCEEBCCHHHHHHHHHHHHHHTTCE-EESSCEEEEEEEETTEEEEEEEECSSS
T ss_pred ceEEecCCccccccccccC---CCCCcceeeEecHHHHHHHHHHHHHhCCCE-EEcCCEEEEEEEECCEEEEEEEEeCCC
Confidence 1111111111112222211 112234468899999999998875 334 89999999999988864 4555567
Q ss_pred c--EEeccEEEecCCCCchhhccccCCCCccccceEeEeeeecCC--CcccccCceEEEeeCCceEEEEeCCCCeEEEEE
Q 024233 171 Q--CYAGDLLVGADGIWSKVRKNLFGPQEAIFSGYTCYTGIADFV--PADIESVGYRVFLGHKQYFVSSDVGAGKMQWYA 246 (270)
Q Consensus 171 ~--~~~ad~vI~AdG~~S~vr~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~~~~ 246 (270)
+ +++||+||+|||.+|.+|+++.......+....++.+++... ...+.......++.++++++++|++++++.+++
T Consensus 155 ~~~~i~ad~VI~AdG~~S~vr~~lg~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Pl~~~~~~vg~ 234 (512)
T 3e1t_A 155 VELMAHARFIVDASGNRTRVSQAVGERVYSRFFQNVALYGYFENGKRLPAPRQGNILSAAFQDGWFWYIPLSDTLTSVGA 234 (512)
T ss_dssp CEEEEEEEEEEECCCTTCSSGGGTCCEEECSTTCEEEEEEEEESCCCCSTTCTTSEEEEEETTEEEEEEECSSSEEEEEE
T ss_pred CEEEEEcCEEEECCCcchHHHHHcCCCccCchhcceEEEEEecCCccCCCCCcCceEEEEeCCceEEEEEeCCCeEEEEE
Confidence 4 899999999999999999998322222334456666655421 111222334455668899999999999877777
Q ss_pred EEeCC
Q 024233 247 FNKEP 251 (270)
Q Consensus 247 ~~~~~ 251 (270)
.....
T Consensus 235 ~~~~~ 239 (512)
T 3e1t_A 235 VVSRE 239 (512)
T ss_dssp EEEHH
T ss_pred EecHH
Confidence 66543
No 14
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.92 E-value=2.6e-23 Score=181.82 Aligned_cols=220 Identities=18% Similarity=0.164 Sum_probs=147.9
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCccc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 97 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~ 97 (270)
.++||+|||||++|+++|+.|+++|++|+|||+.+.+.... +..+.+.+...++++ ++++.+.+.+.......
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~-----g~~~~~~~~~~l~~~--g~~~~~~~~~~~~~~~~ 76 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVI-----GESLLPRCMEHLDEA--GFLDAVKAQGFQQKFGA 76 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCS-----CCBCCGGGHHHHHHT--TCHHHHHHTTCEEECEE
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcc-----cCcccHhHHHHHHHc--CChHHHHHcCCcccCCc
Confidence 35899999999999999999999999999999996543222 356889999999999 78888877664332222
Q ss_pred cccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhc---CCccEEeCceEEEEEecCCeE--EEEEcCCc-
Q 024233 98 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDHGDKV--SVVLENGQ- 171 (270)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~~--~v~~~~g~- 171 (270)
. +.. ......++... ......+..+.++|..+.+.|.+.+ +.. ++++++|+++..+++++ .+.+.+|+
T Consensus 77 ~-~~~---~~~~~~~~~~~-~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~-i~~~~~v~~i~~~~~~~~v~v~~~~g~~ 150 (421)
T 3nix_A 77 K-FVR---GKEIADFNFSD-QFSNGWNWTWQVPRGNFDKTLADEAARQGVD-VEYEVGVTDIKFFGTDSVTTIEDINGNK 150 (421)
T ss_dssp E-EEE---TTEEEEEETTS-CSSCSCCCEEECCHHHHHHHHHHHHHHHTCE-EECSEEEEEEEEETTEEEEEEEETTSCE
T ss_pred E-EEe---CCeeEEEeehh-hcCCCCCceeEECHHHHHHHHHHHHHhCCCE-EEcCCEEEEEEEeCCEEEEEEEcCCCCE
Confidence 1 111 11122222111 1112234468999999999998875 444 89999999999887775 45557787
Q ss_pred -EEeccEEEecCCCCchhhccccCCCCccccceEeEeeeecC-CC-cccccCceEEEee---CCceEEEEeCCCCeEEEE
Q 024233 172 -CYAGDLLVGADGIWSKVRKNLFGPQEAIFSGYTCYTGIADF-VP-ADIESVGYRVFLG---HKQYFVSSDVGAGKMQWY 245 (270)
Q Consensus 172 -~~~ad~vI~AdG~~S~vr~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~---~~~~~~~~p~~~g~~~~~ 245 (270)
+++||+||+|||.+|.+|+.+............++...... .+ .........+++. +.++++++|+++|++.+.
T Consensus 151 ~~~~a~~vV~A~G~~s~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg 230 (421)
T 3nix_A 151 REIEARFIIDASGYGRVIPRMFGLDKPSGFESRRTLFTHIKDVKRPVAAEMEGNRITAVVHKPKVWIWVIPFSNGNTSVG 230 (421)
T ss_dssp EEEEEEEEEECCGGGCHHHHHTTCEECCSSCCCEEEEEEEECTTCCC----CCSEEEEEEEETTEEEEEEECTTSEEEEE
T ss_pred EEEEcCEEEECCCCchhhHHhcCCCCCCcCCCcEEEEEEECCCcCCCccCCCCeEEEEEeCCCCEEEEEEEECCCCEEEE
Confidence 79999999999999999987743222222333333333322 11 1111122233333 678999999999997777
Q ss_pred EEEeC
Q 024233 246 AFNKE 250 (270)
Q Consensus 246 ~~~~~ 250 (270)
+....
T Consensus 231 ~~~~~ 235 (421)
T 3nix_A 231 FVGEP 235 (421)
T ss_dssp EEECH
T ss_pred EEecH
Confidence 76543
No 15
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.92 E-value=2.5e-23 Score=187.48 Aligned_cols=216 Identities=22% Similarity=0.221 Sum_probs=142.8
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCccc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 97 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~ 97 (270)
.++||+||||||+||++|+.|+++|++|+||||.+..... ..+..+.++++++|+++ ++++.+.+.+.......
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~----~~~~~l~~~~~~~l~~l--Gl~~~~~~~~~~~~~~~ 77 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPY----PRAAGQNPRTMELLRIG--GVADEVVRADDIRGTQG 77 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCC----CCSCCBCHHHHHHHHHT--TCHHHHHHSCCSSCTTS
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCC----CccceECHHHHHHHHHc--CCHHHHHhhCCCccccc
Confidence 4589999999999999999999999999999998654322 23567999999999999 88999888775433221
Q ss_pred cc---cccCCCCceeEeec-CCcc-----cccCCCCeEEEEeHHHHHHHHHHhcCC--ccEEeCceEEEEEecCC----e
Q 024233 98 NG---LVDGISGSWYIKFD-TFTP-----AAEKGLPVTRVISRMTLQQILAKAVGD--EIILNESNVIDFKDHGD----K 162 (270)
Q Consensus 98 ~~---~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~~i~~~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~----~ 162 (270)
.. ......+..+.... .... ......+ ...+++..|.+.|.+.+.. ..++++++|++++.+++ +
T Consensus 78 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~ 156 (535)
T 3ihg_A 78 DFVIRLAESVRGEILRTVSESFDDMVAATEPCTPAG-WAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAG 156 (535)
T ss_dssp CCEEEEESSSSSCEEEEEESCHHHHHHTTGGGCSCC-CBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSE
T ss_pred ceeeeEEeccCCceeeeccccccccccccccCCCCc-ccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCcccc
Confidence 10 11112233332111 0000 0001122 3678999999999987532 23999999999999888 8
Q ss_pred EEEEEcCC---cEEeccEEEecCCCCchhhcccc-CCCCccccce-EeEeeeecCCCccc-ccCc-eEEEeeCCceEEEE
Q 024233 163 VSVVLENG---QCYAGDLLVGADGIWSKVRKNLF-GPQEAIFSGY-TCYTGIADFVPADI-ESVG-YRVFLGHKQYFVSS 235 (270)
Q Consensus 163 ~~v~~~~g---~~~~ad~vI~AdG~~S~vr~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~ 235 (270)
+++.+.++ .+++||+||+|||.+|.+|+.+. +...+.+... ..+....+ .+... .... ...++.++...+++
T Consensus 157 v~v~~~~~~~~~~i~a~~vV~AdG~~S~vR~~lgi~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~ 235 (535)
T 3ihg_A 157 VTARLAGPDGEYDLRAGYLVGADGNRSLVRESLGIGRYGHGTLTHMVGVIFDAD-LSGIMEPGTTGWYYLHHPEFKGTFG 235 (535)
T ss_dssp EEEEEEETTEEEEEEEEEEEECCCTTCHHHHHTTCCEEEEEEEEEEEEEEEECC-GGGTSCTTCCEEEEEECSSCEEEEE
T ss_pred EEEEEEcCCCeEEEEeCEEEECCCCcchHHHHcCCCcCCCCccceEEEEEEecc-ChhhccCCceEEEEEECCCceEEEE
Confidence 99888876 78999999999999999999883 2222222111 11111111 11111 1112 23345678888888
Q ss_pred eCCCCe
Q 024233 236 DVGAGK 241 (270)
Q Consensus 236 p~~~g~ 241 (270)
|++++.
T Consensus 236 p~~~~~ 241 (535)
T 3ihg_A 236 PTDRPD 241 (535)
T ss_dssp ECSSTT
T ss_pred EecCCC
Confidence 998754
No 16
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.91 E-value=6.8e-23 Score=188.42 Aligned_cols=222 Identities=14% Similarity=0.146 Sum_probs=145.0
Q ss_pred CcceEEEEcCCHHHHHHHHHHHh-----CCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKR-----KGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCV 92 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~-----~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~ 92 (270)
..+||+||||||+||++|+.|++ +|++|+||||.+.+.. .+.++.++++++++|+++ ++++.+.+.+..
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~----~gra~~l~~~tle~l~~l--Gl~~~l~~~~~~ 80 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVY----NGQADGLQCRTLESLKNL--GLADKILSEAND 80 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCC----SCSCCEECHHHHHHHHTT--TCHHHHHTTCBC
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCC----CCceeEEChHHHHHHHHC--CCHHHHHHhccc
Confidence 35799999999999999999999 9999999999864332 223678999999999999 889998876543
Q ss_pred cCccccccccCC-CCceeE--eecCCcccccCCCCeEEEEeHHHHHHHHHHhc---C--CccEEeCceEEEEEecC----
Q 024233 93 TGDRINGLVDGI-SGSWYI--KFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---G--DEIILNESNVIDFKDHG---- 160 (270)
Q Consensus 93 ~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~---~--~~~i~~~~~v~~i~~~~---- 160 (270)
... +. ++... .+.... .++... ..........++|..|.+.|.+.+ + ...++++++|++++.++
T Consensus 81 ~~~-~~-~~~~~~~g~i~~~~~~~~~~--~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~ 156 (665)
T 1pn0_A 81 MST-IA-LYNPDENGHIRRTDRIPDTL--PGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAE 156 (665)
T ss_dssp CCE-EE-EEEECTTSCEEEEEEEESSC--TTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTT
T ss_pred cce-EE-EEeCCCCcceEeecccCccc--CCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcccc
Confidence 221 11 22211 121111 111100 111112236899999999998875 2 12499999999998865
Q ss_pred ----CeEEEEEc------------------------------------------CC--cEEeccEEEecCCCCchhhccc
Q 024233 161 ----DKVSVVLE------------------------------------------NG--QCYAGDLLVGADGIWSKVRKNL 192 (270)
Q Consensus 161 ----~~~~v~~~------------------------------------------~g--~~~~ad~vI~AdG~~S~vr~~~ 192 (270)
+++++++. +| ++++||+||+|||++|.+|+++
T Consensus 157 ~~~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S~VR~~l 236 (665)
T 1pn0_A 157 DPEAYPVTMTLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSWVRRTL 236 (665)
T ss_dssp CTTCCCEEEEEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCHHHHHH
T ss_pred cCCCCCEEEEEEecccccccccccccccccccccccccccccccccccccccCCCCceEEEEeCEEEeccCCCCHHHHhc
Confidence 46777653 34 4799999999999999999998
Q ss_pred cCCCCccccceEeEeeeecCCCc-c-cc-cCceEEEeeCCceEEEEeCCCCeEEEEEEEeCC
Q 024233 193 FGPQEAIFSGYTCYTGIADFVPA-D-IE-SVGYRVFLGHKQYFVSSDVGAGKMQWYAFNKEP 251 (270)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~-~-~~-~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~ 251 (270)
. ...+....... +++.+..+. + +. .....++..+.++++++|++++.++|++.....
T Consensus 237 g-~~~~g~~~~~~-~~v~d~~~~~~~p~~~~~~~~~~~~~g~~~~~P~~~~~~r~~~~~~~~ 296 (665)
T 1pn0_A 237 G-FEMIGEQTDYI-WGVLDAVPASNFPDIRSRCAIHSAESGSIMIIPRENNLVRFYVQLQAR 296 (665)
T ss_dssp T-CCCEEEEEEEE-EEEEEEEEECCCTTTTSEEEEECSSSCEEEEEECSTTCEEEEEEECC-
T ss_pred C-CCCCCCCccEE-EEEEEEEECCCCCCcceEEEEEeCCCceEEEEEcCCCEEEEEEEeCCc
Confidence 4 22222221222 233332111 1 11 112223333678899999999987777766543
No 17
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.90 E-value=5.5e-22 Score=181.94 Aligned_cols=222 Identities=16% Similarity=0.220 Sum_probs=142.3
Q ss_pred CcceEEEEcCCHHHHHHHHHHHh-CCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKR-KGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 96 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~-~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~ 96 (270)
..+||+||||||+||++|+.|++ +|++|+||||.+.... .+.++.+.++++++|+++ ++.+.+.+.+.....
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~----~g~a~~l~~~t~e~l~~l--Gl~~~~~~~~~~~~~- 103 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPME----LGQADGIACRTMEMFEAF--EFADSILKEACWIND- 103 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCS----SCSCCEECHHHHHHHHHT--TCHHHHHHHSEEECE-
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCC----CCceeeeCHHHHHHHHHc--CcHHHHHHhcccccc-
Confidence 45899999999999999999999 9999999999864332 223678999999999999 788888776543221
Q ss_pred ccccccCC---CCceeEeecCCc-ccccCCCCeEEEEeHHHHHHHHHHhc---CCc-cEEeCceEEEEEecCC----eEE
Q 024233 97 INGLVDGI---SGSWYIKFDTFT-PAAEKGLPVTRVISRMTLQQILAKAV---GDE-IILNESNVIDFKDHGD----KVS 164 (270)
Q Consensus 97 ~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~l~~~L~~~~---~~~-~i~~~~~v~~i~~~~~----~~~ 164 (270)
. .++... .+. +....... .......+....++|..+.+.|.+.+ +.. .++++++|++++.+++ +++
T Consensus 104 ~-~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~ 181 (639)
T 2dkh_A 104 V-TFWKPDPGQPGR-IARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVT 181 (639)
T ss_dssp E-EEEEECTTSTTC-EEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEE
T ss_pred e-EEECCCCCCCcc-eEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEE
Confidence 1 122110 121 11111000 00111122247899999999998875 431 3899999999998763 577
Q ss_pred EEEc------CC--cEEeccEEEecCCCCchhhccccCCCCccccceEeEeeeecCCC--cccccCceEEEeeCCceEEE
Q 024233 165 VVLE------NG--QCYAGDLLVGADGIWSKVRKNLFGPQEAIFSGYTCYTGIADFVP--ADIESVGYRVFLGHKQYFVS 234 (270)
Q Consensus 165 v~~~------~g--~~~~ad~vI~AdG~~S~vr~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 234 (270)
+++. +| .+++||+||+|||.+|.+|+.+. ...+.......| ++.+..+ ..+.......+..+++++++
T Consensus 182 v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg-~~~~g~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~~g~~~~ 259 (639)
T 2dkh_A 182 VTLERCDAAHAGQIETVQARYVVGCDGARSNVRRAIG-RQLVGDSANQAW-GVMDVLAVTDFPDVRYKVAIQSEQGNVLI 259 (639)
T ss_dssp EEEEECSGGGTTCEEEEEEEEEEECCCTTCHHHHHTT-CCCEECSCSCCE-EEEEEEEEECCTTTTSEEEEEETTEEEEE
T ss_pred EEEEeccccCCCCeEEEEeCEEEECCCcchHHHHHhC-CCCCCCCccceE-EEEEEEEccCCCccceeEEEEcCCceEEE
Confidence 7765 45 47999999999999999999884 222211111122 2222111 01111112222237888999
Q ss_pred EeCCCC-eEEEEEEEeC
Q 024233 235 SDVGAG-KMQWYAFNKE 250 (270)
Q Consensus 235 ~p~~~g-~~~~~~~~~~ 250 (270)
+|++++ .+++++....
T Consensus 260 ~P~~~~~~~r~~~~~~~ 276 (639)
T 2dkh_A 260 IPREGGHLVRFYVEMDK 276 (639)
T ss_dssp EECTTSSCEEEEEECC-
T ss_pred EEcCCCcEEEEEEECCC
Confidence 999998 5677665443
No 18
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.90 E-value=2.6e-22 Score=174.10 Aligned_cols=215 Identities=16% Similarity=0.257 Sum_probs=140.3
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccc--cCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAI--RGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 96 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~--~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~ 96 (270)
++||+||||||+|+++|+.|+++|++|+|||+.+... ...+ +..+.+++.++|+++ ++++.+.+.+.....
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~----~g~l~~~~~~~l~~l--g~~~~~~~~~~~~~~- 74 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIR----AGVLEQGMVDLLREA--GVDRRMARDGLVHEG- 74 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCC----CCEECHHHHHHHHHT--TCCHHHHHHCEEESC-
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCc----eEeECHHHHHHHHHc--CCcHHHHhcCCccce-
Confidence 4799999999999999999999999999999986431 1111 124889999999999 777887765543221
Q ss_pred ccccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhc---CCccEEeCceEEEEEecC-CeEEEEE-cCCc
Q 024233 97 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDHG-DKVSVVL-ENGQ 171 (270)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~-~~~~v~~-~~g~ 171 (270)
+. +.. .+. ...++... ...+ ...+.+++..+.+.|.+.+ +.. ++++++|++++.++ +++.+++ .+|+
T Consensus 75 ~~-~~~--~~~-~~~~~~~~--~~~~-~~~~~~~~~~l~~~L~~~~~~~g~~-i~~~~~v~~i~~~~~~~~~v~~~~~g~ 146 (394)
T 1k0i_A 75 VE-IAF--AGQ-RRRIDLKR--LSGG-KTVTVYGQTEVTRDLMEAREACGAT-TVYQAAEVRLHDLQGERPYVTFERDGE 146 (394)
T ss_dssp EE-EEE--TTE-EEEECHHH--HHTS-CCEEECCHHHHHHHHHHHHHHTTCE-EESSCEEEEEECTTSSSCEEEEEETTE
T ss_pred EE-EEE--CCc-eEEecccc--ccCC-CceEEechHHHHHHHHHHHHhcCCe-EEeceeEEEEEEecCCceEEEEecCCc
Confidence 11 111 111 11111100 0112 2347788999998888775 334 89999999998864 5677777 6886
Q ss_pred --EEeccEEEecCCCCchhhccccCCCCccccce--EeEeeeecCCCcccccCceEEEeeCCceEEEEeCCCCeEEEEEE
Q 024233 172 --CYAGDLLVGADGIWSKVRKNLFGPQEAIFSGY--TCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAF 247 (270)
Q Consensus 172 --~~~ad~vI~AdG~~S~vr~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~ 247 (270)
+++||+||+|||.+|.+|+.+.....+.+.+. ..+.++....+.. .....+...+++++++.|.+++..+|++.
T Consensus 147 ~~~~~a~~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 224 (394)
T 1k0i_A 147 RLRLDCDYIAGCDGFHGISRQSIPAERLKVFERVYPFGWLGLLADTPPV--SHELIYANHPRGFALCSQRSATRSQYYVQ 224 (394)
T ss_dssp EEEEECSEEEECCCTTCSTGGGSCGGGCEEEEEEEEEEEEEEEESSCCS--CSSCEEECCTTCCEEEEEEETTEEEEEEE
T ss_pred EEEEEeCEEEECCCCCcHHHHhcCccccccccccccceeEEEecCCCCC--ccceEEEEcCCceEEEEecCCCcEEEEEE
Confidence 79999999999999999998843323334332 3444443322221 11222233466666666666777777776
Q ss_pred EeC
Q 024233 248 NKE 250 (270)
Q Consensus 248 ~~~ 250 (270)
...
T Consensus 225 ~~~ 227 (394)
T 1k0i_A 225 VPL 227 (394)
T ss_dssp ECT
T ss_pred eCC
Confidence 644
No 19
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.89 E-value=5.3e-22 Score=171.58 Aligned_cols=218 Identities=17% Similarity=0.149 Sum_probs=129.4
Q ss_pred CCcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcc
Q 024233 17 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 96 (270)
Q Consensus 17 ~~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~ 96 (270)
|++|||+||||||+||++|+.|+++|++|+||||.+..... ..++ -.+.+. .+++++.. .......... ..
T Consensus 2 Me~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~-~~~g--~~l~~~---~l~~l~~~--~~~~~~~~~~-~~ 72 (397)
T 3oz2_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSP-VRCG--EGLSKG---ILNEADIK--ADRSFIANEV-KG 72 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCS-CCSC--CEEETH---HHHHTTCC--CCTTTEEEEE-SE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCC-Ccee--cccCHH---HHHHcCCC--chhhhhhccc-ce
Confidence 45699999999999999999999999999999998643221 1112 234443 45555211 1000000000 00
Q ss_pred ccccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhc---CCccEEeCceEEEEEecCCeEEEE-E-cCC-
Q 024233 97 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDHGDKVSVV-L-ENG- 170 (270)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~~~v~-~-~~g- 170 (270)
. .+.. ..+........ ...+...++.++|..+.+.|.+.+ +.. ++++++|+++..+++.+... . .++
T Consensus 73 ~-~~~~-~~~~~~~~~~~----~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~-~~~~~~v~~~~~~~~~~~~v~~~~~~~ 145 (397)
T 3oz2_A 73 A-RIYG-PSEKRPIILQS----EKAGNEVGYVLERDKFDKHLAALAAKAGAD-VWVKSPALGVIKENGKVAGAKIRHNNE 145 (397)
T ss_dssp E-EEEC-TTCSSCEEEEC----SSSSCCCEEEECHHHHHHHHHHHHHHHTCE-EESSCCEEEEEEETTEEEEEEEEETTE
T ss_pred E-EEEe-CCCceEeeccc----cccCCceeEEEEHHHHHHHHHHHHHhcCcE-Eeeeeeeeeeeeccceeeeeeeccccc
Confidence 0 0111 11111111111 112234468999999999998875 444 89999999999888876533 2 233
Q ss_pred -cEEeccEEEecCCCCchhhccccCCC-CccccceEeEeeeecCCCcccccCceEEEee---CCceEEEEeCCCCeEEEE
Q 024233 171 -QCYAGDLLVGADGIWSKVRKNLFGPQ-EAIFSGYTCYTGIADFVPADIESVGYRVFLG---HKQYFVSSDVGAGKMQWY 245 (270)
Q Consensus 171 -~~~~ad~vI~AdG~~S~vr~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~p~~~g~~~~~ 245 (270)
.+++||+||+|||.+|.+|+.+.... ...+........+.. .....+.....++++ ++++++++|.+++..++.
T Consensus 146 ~~~~~a~~vIgAdG~~S~vr~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~vg 224 (397)
T 3oz2_A 146 IVDVRAKMVIAADGFESEFGRWAGLKSVILARNDIISALQYRM-INVDVDPDYTDFYLGSIAPAGYIWVFPKGEGMANVG 224 (397)
T ss_dssp EEEEEEEEEEECCCTTCHHHHHHTCGGGCCCGGGEEEEEEEEE-ESCCCCTTEEEEECSTTSTTEEEEEEEEETTEEEEE
T ss_pred ceEEEEeEEEeCCccccHHHHHcCCCcccccceeeeeeEEEEe-eccccCcccceeeeeccCCCceEEEeecccceeEEE
Confidence 36899999999999999999884222 222223332222211 111222333344443 678999999999987766
Q ss_pred EEEeCC
Q 024233 246 AFNKEP 251 (270)
Q Consensus 246 ~~~~~~ 251 (270)
+.....
T Consensus 225 ~~~~~~ 230 (397)
T 3oz2_A 225 IGSSIN 230 (397)
T ss_dssp EEEETT
T ss_pred Eeeccc
Confidence 655443
No 20
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.88 E-value=1.9e-21 Score=171.69 Aligned_cols=213 Identities=16% Similarity=0.099 Sum_probs=131.8
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcccc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 98 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 98 (270)
++||+||||||+|+++|+.|+++|++|+|||+.+.+..+...++ ..+ +...+++++ +................
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g--~~l---~~~~l~~lg--~~~~~~~~~~~~~~~~~ 78 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCG--DAV---SKAHFDKLG--MPYPKGEELENKINGIK 78 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCC--CEE---EHHHHHHTT--CCCCCGGGEEEEEEEEE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCccccc--ccc---cHHHHHHhc--CCCCchHHHHhhhcceE
Confidence 58999999999999999999999999999999865422111111 222 456667663 22111000000000000
Q ss_pred ccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhc---CCccEEeCceEEEEEecCCeEE-EEEc---CCc
Q 024233 99 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDHGDKVS-VVLE---NGQ 171 (270)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~~~-v~~~---~g~ 171 (270)
+.. ..+.....+ ...++.++|..+.+.|.+.+ +.. ++++++|+++..+++++. +.+. +|+
T Consensus 79 -~~~-~~~~~~~~~----------~~~~~~i~r~~l~~~L~~~a~~~gv~-i~~~~~v~~i~~~~~~v~gv~~~~~~~G~ 145 (453)
T 3atr_A 79 -LYS-PDMQTVWTV----------NGEGFELNAPLYNQRVLKEAQDRGVE-IWDLTTAMKPIFEDGYVKGAVLFNRRTNE 145 (453)
T ss_dssp -EEC-TTSSCEEEE----------EEEEEEECHHHHHHHHHHHHHHTTCE-EESSEEEEEEEEETTEEEEEEEEETTTTE
T ss_pred -EEC-CCCceEEeE----------CCCcEEEcHHHHHHHHHHHHHHcCCE-EEeCcEEEEEEEECCEEEEEEEEEcCCCc
Confidence 010 011000000 01257899999999998875 334 999999999998888765 5543 665
Q ss_pred --EEeccEEEecCCCCchhhccccCCC---Cccc--cceEeEeeeecCCCcccccCceEEEee----CCceEEEEeCCCC
Q 024233 172 --CYAGDLLVGADGIWSKVRKNLFGPQ---EAIF--SGYTCYTGIADFVPADIESVGYRVFLG----HKQYFVSSDVGAG 240 (270)
Q Consensus 172 --~~~ad~vI~AdG~~S~vr~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~p~~~g 240 (270)
+++||+||+|||.+|.+|+.+.... .+.+ ....++...+.......+.....++++ ++++++++|++++
T Consensus 146 ~~~~~ad~VV~AdG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~ 225 (453)
T 3atr_A 146 ELTVYSKVVVEATGYSRSFRSKLPPELPITEDLDDKDADVAYREVLLTKEDIEDHDYLRIFIDQETSPGGYWWYFPKGKN 225 (453)
T ss_dssp EEEEECSEEEECCGGGCTTGGGSCTTSGGGCCCCGGGEEEEEEEEEEESSCCTTTTEEEEECCTTTSTTSCEEEEEEETT
T ss_pred eEEEEcCEEEECcCCchhhHHhcCCCCCcccCCCcccceeeeEEEEecCCCccCCCeEEEEECCCCCCCcEEEEEECCCC
Confidence 7999999999999999999874321 1112 234555554432211112222345553 6789999999999
Q ss_pred eEEEEEEEeCC
Q 024233 241 KMQWYAFNKEP 251 (270)
Q Consensus 241 ~~~~~~~~~~~ 251 (270)
++++.+.....
T Consensus 226 ~~~vg~~~~~~ 236 (453)
T 3atr_A 226 KVNVGLGIQGG 236 (453)
T ss_dssp EEEEEEEEESS
T ss_pred eEEEEEEecCC
Confidence 88777766543
No 21
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.88 E-value=2.5e-21 Score=167.83 Aligned_cols=215 Identities=17% Similarity=0.111 Sum_probs=131.2
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCccc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 97 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~ 97 (270)
.++||+|||||++|+++|+.|+++|++|+|||+.+...... ..+ -.+.+ +.++++ +++........ .....
T Consensus 3 ~~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~-~~~--~~~~~---~~~~~l--g~~~~~~~~~~-~~~~~ 73 (397)
T 3cgv_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPV-RCG--EGLSK---GILNEA--DIKADRSFIAN-EVKGA 73 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSC-CSC--CEEET---HHHHHT--TCCCCTTTEEE-EESEE
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCc-ccc--cccCH---HHHHHc--CCCCChHHhhh-hcceE
Confidence 45899999999999999999999999999999986432111 111 12222 456666 32211000000 00001
Q ss_pred cccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhc---CCccEEeCceEEEEEecCCeEE-EEEc---CC
Q 024233 98 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDHGDKVS-VVLE---NG 170 (270)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~~~-v~~~---~g 170 (270)
.+.. ..+.....++.. ..+.+.++.++|..+.+.|.+.+ +.. ++++++|++++.+++++. |.+. ++
T Consensus 74 -~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~L~~~~~~~gv~-i~~~~~v~~i~~~~~~v~gv~~~~~~~~ 146 (397)
T 3cgv_A 74 -RIYG-PSEKRPIILQSE----KAGNEVGYVLERDKFDKHLAALAAKAGAD-VWVKSPALGVIKENGKVAGAKIRHNNEI 146 (397)
T ss_dssp -EEEC-TTCSSCEEEC---------CCCEEEECHHHHHHHHHHHHHHHTCE-EESSCCEEEEEEETTEEEEEEEEETTEE
T ss_pred -EEEc-CCCCEEEEEecc----ccCCceeEEEeHHHHHHHHHHHHHhCCCE-EEECCEEEEEEEeCCEEEEEEEEECCeE
Confidence 0111 111110111111 11234468999999999998875 444 899999999999888876 6663 45
Q ss_pred cEEeccEEEecCCCCchhhccccCCC-C--ccccceEeEeeeecCCCcccccCceEEEe---eCCceEEEEeCCCCeEEE
Q 024233 171 QCYAGDLLVGADGIWSKVRKNLFGPQ-E--AIFSGYTCYTGIADFVPADIESVGYRVFL---GHKQYFVSSDVGAGKMQW 244 (270)
Q Consensus 171 ~~~~ad~vI~AdG~~S~vr~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~p~~~g~~~~ 244 (270)
.+++||+||+|||.+|.+|+.+.... . +.... .++....... ..+.....+++ .++++++++|++++++.+
T Consensus 147 ~~~~a~~vV~A~G~~s~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~v 223 (397)
T 3cgv_A 147 VDVRAKMVIAADGFESEFGRWAGLKSVILARNDII-SALQYRMINV--DVDPDYTDFYLGSIAPAGYIWVFPKGEGMANV 223 (397)
T ss_dssp EEEEEEEEEECCCTTCHHHHHHTCCTTCCCGGGEE-EEEEEEEESC--CCCTTEEEEECSTTSTTEEEEEEEEETTEEEE
T ss_pred EEEEcCEEEECCCcchHhHHhcCCCccCCChhhee-EEEEEEeccC--CCCCCcEEEEeCCcCCCceEEEEECCCCeEEE
Confidence 68999999999999999999883222 1 22221 2222222211 12223344554 478899999999998777
Q ss_pred EEEEeCC
Q 024233 245 YAFNKEP 251 (270)
Q Consensus 245 ~~~~~~~ 251 (270)
.+.....
T Consensus 224 g~~~~~~ 230 (397)
T 3cgv_A 224 GIGSSIN 230 (397)
T ss_dssp EEEEETT
T ss_pred EEEeccc
Confidence 7766554
No 22
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.85 E-value=2.8e-19 Score=160.18 Aligned_cols=219 Identities=12% Similarity=0.068 Sum_probs=129.2
Q ss_pred cceEEEEcCCHHHHHHHHHHHh---CCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHH--HHHhcccc
Q 024233 19 KLRILVAGGGIGGLVFALAAKR---KGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEE--VMRAGCVT 93 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~---~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~--l~~~~~~~ 93 (270)
.+||+|||||++|+++|+.|++ +|++|+|||+.+.+..+. +..+.+....+++.+ ++.+. +.......
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~~~~~~-----g~~~~~~~~~~l~~l--gi~~~~~~~~~~~~~ 74 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNVRRIGV-----GEATFSTVRHFFDYL--GLDEREWLPRCAGGY 74 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC-------C-----CEECCTTHHHHHHHH--TCCHHHHHHHTTCEE
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCCCceee-----ccccCcchHHHHHHc--CCCHHHHHHHcCCeE
Confidence 4699999999999999999999 999999999985433222 355778888899998 44443 44433211
Q ss_pred CccccccccCC-CCc-eeEeec--------------------------------------CC---cccccC---------
Q 024233 94 GDRINGLVDGI-SGS-WYIKFD--------------------------------------TF---TPAAEK--------- 121 (270)
Q Consensus 94 ~~~~~~~~~~~-~~~-~~~~~~--------------------------------------~~---~~~~~~--------- 121 (270)
...+. +.+.. .+. ....+. .. ......
T Consensus 75 ~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (511)
T 2weu_A 75 KLGIR-FENWSEPGEYFYHPFERLRVVDGFNMAEWWLAVGDRRTSFSEACYLTHRLCEAKRAPRMLDGSLFASQVDESLG 153 (511)
T ss_dssp ECEEE-EESSSSTTCEEEEESCCCCEETTEEHHHHHHHHC----CHHHHHCHHHHHHHTTBCSBCTTSCBCC------CC
T ss_pred eccce-ecCCCCCCCceEcCCCCCCCCCCCchHHHHHhccccccCcccccccccCHHHhhhhHHhHhcCCcccccccccc
Confidence 11100 00000 000 000000 00 000000
Q ss_pred -------C--CCeEEEEeHHHHHHHHHHhc---CCccEEeCceEEEEEecCCe--EEEEEcCCcEEeccEEEecCCCCch
Q 024233 122 -------G--LPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDHGDK--VSVVLENGQCYAGDLLVGADGIWSK 187 (270)
Q Consensus 122 -------~--~~~~~~i~~~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~--~~v~~~~g~~~~ad~vI~AdG~~S~ 187 (270)
. .+.++.++|..+.+.|.+.+ +.. ++.+ +|+++..++++ +.|.+.+|++++||+||+|||.+|.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~gv~-~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 231 (511)
T 2weu_A 154 RSTLAEQRAQFPYAYHFDADEVARYLSEYAIARGVR-HVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGL 231 (511)
T ss_dssp SCCGGGCCSCCSCEEEECHHHHHHHHHHHHHHTTCE-EEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCC
T ss_pred ccccccCcCCCCeeEEEcHHHHHHHHHHHHHHCCCE-EEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchH
Confidence 1 34468899999999998875 444 7888 99999886555 6688888888999999999999999
Q ss_pred hhccccCCCCc----cccceEeEeeeecCCCcccccCceEEEeeCCceEEEEeCCCCeEEEEEEE
Q 024233 188 VRKNLFGPQEA----IFSGYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFN 248 (270)
Q Consensus 188 vr~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~ 248 (270)
+++.+++.... ......++...................+.++++++++|+++ ++.+.+..
T Consensus 232 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~-~~~~g~~~ 295 (511)
T 2weu_A 232 LINQTLGGRFQSFSDVLPNNRAVALRVPRENDEDMRPYTTATAMSAGWMWTIPLFK-RDGNGYVY 295 (511)
T ss_dssp CCCCCTCCCEEECTTTCCCCEEEEEEEECSSGGGCCSSEEEEEETTEEEEEEECSS-EEEEEEEE
T ss_pred HHHHHhCCCCccccccCcccceEEEEeccCCCCCCCcceeceecCCCcEEEEECCC-ceEEEEEE
Confidence 97766543311 11111122111211111001222334556788999999987 44444433
No 23
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.84 E-value=2.7e-19 Score=160.71 Aligned_cols=216 Identities=10% Similarity=0.069 Sum_probs=130.8
Q ss_pred CcceEEEEcCCHHHHHHHHHHHh------------CCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHH
Q 024233 18 KKLRILVAGGGIGGLVFALAAKR------------KGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEE 85 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~------------~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~ 85 (270)
..+||+|||||++|+++|+.|++ .|++|+|||+.+.+..+. +..+.|++..+|+++ ++.+.
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~~~~g~-----g~~~~p~~~~~l~~l--Gi~e~ 78 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDVATIGV-----GEGTWPSMRSTLSKI--GIDEN 78 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSCCCCCS-----CEECCTHHHHHHHHH--TCCHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCCCCcce-----eeechHhHHHHHHHc--CCCHH
Confidence 45799999999999999999999 999999999975433222 467889999999999 56564
Q ss_pred --HHHhccccCccccccccCCC------Cce-eEeec---------C----C----c--------------------c--
Q 024233 86 --VMRAGCVTGDRINGLVDGIS------GSW-YIKFD---------T----F----T--------------------P-- 117 (270)
Q Consensus 86 --l~~~~~~~~~~~~~~~~~~~------~~~-~~~~~---------~----~----~--------------------~-- 117 (270)
+...+......+. +.+... +.. ...+. . . . .
T Consensus 79 ~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~v~~q~~~~~~~~~~~~~ 157 (526)
T 2pyx_A 79 DFIRQCDASFKQGSR-FINWCKDPQSNVADSYLHPFSLPHGHQELDLCPYWLPHAEQVSFAEAVCSQQVLTQLGLAPKSI 157 (526)
T ss_dssp HHHHHTTCEEECEEE-EESCSSCCBTTBCCEEEEESSCCTTTTTCCCHHHHGGGTTTSCHHHHHCSHHHHHHTTBCSSCT
T ss_pred HHHHHcCCEEECCCc-ccCCCccccCCCCCceecCCCCCCCCCCCChhHHHHhhhhccCchhhcccccchhhhccchhhh
Confidence 5544332111111 000000 000 00000 0 0 0 0
Q ss_pred -ccc--CCCCeEEEEeHHHHHHHHHHhcCC--c-cEEeCceEEEEEecCCe--EEEEEcCCcEEeccEEEecCCCCchhh
Q 024233 118 -AAE--KGLPVTRVISRMTLQQILAKAVGD--E-IILNESNVIDFKDHGDK--VSVVLENGQCYAGDLLVGADGIWSKVR 189 (270)
Q Consensus 118 -~~~--~~~~~~~~i~~~~l~~~L~~~~~~--~-~i~~~~~v~~i~~~~~~--~~v~~~~g~~~~ad~vI~AdG~~S~vr 189 (270)
... ...+..+.++|..+.+.|.+.+.. . .++++ +|+++..++++ +.+.+.+|++++||+||+|||.+|.+|
T Consensus 158 ~~~~~~~~~~~~~~~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~~~ 236 (526)
T 2pyx_A 158 VTAQYHFQNNYGYHLNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSLLL 236 (526)
T ss_dssp TSCTTCCSSCCEEEECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCCCC
T ss_pred hccccCCCCCeeEEEcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchHHH
Confidence 000 112346889999999999887532 2 37778 69999886554 357777877899999999999999995
Q ss_pred ccccCCCCccc----cceEeEeeeecCCC-cccccCceEEEeeCCceEEEEeCCCCeE
Q 024233 190 KNLFGPQEAIF----SGYTCYTGIADFVP-ADIESVGYRVFLGHKQYFVSSDVGAGKM 242 (270)
Q Consensus 190 ~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~g~~ 242 (270)
+..++.....+ ....++........ ...........+.+.++++.+|++++..
T Consensus 237 ~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~pl~~~~~ 294 (526)
T 2pyx_A 237 GEHLQVPFLSQKSVLFNDRALAIQVPYSDANSPIASCTHSTAQPNGWIWDIGLPTRKG 294 (526)
T ss_dssp CCCTCCCEEECHHHHCCCEEEEEEEECSSTTCCCCSSEEEEEETTEEEEEEECSSEEE
T ss_pred HHHhCCCcccccccccCccEEEEEeeccCCCCCCCCceeEEecCCCeEEEeeCCCceE
Confidence 55544322111 11122221121111 0111122334456788999999988543
No 24
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.81 E-value=3.2e-18 Score=154.19 Aligned_cols=217 Identities=10% Similarity=0.062 Sum_probs=129.2
Q ss_pred CcceEEEEcCCHHHHHHHHHHHh---CCCcEEEEeccCccccCCCCcccceeechhHHH-HHHHcCcChHHHHHHhcccc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKR---KGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALA-ALEAIDLDVAEEVMRAGCVT 93 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~---~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~-~l~~~~~~~~~~l~~~~~~~ 93 (270)
..+||+|||||++|+++|+.|++ .|++|+|||+...+...+ +..+.++... +++.++....+.+.......
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~~~~-----g~~~~~~~~~~~l~~lG~~~~~~~~~~~~~~ 78 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAIPRIGV-----GEATIPSLQKVFFDFLGIPEREWMPQVNGAF 78 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSSCCCCS-----CEECCTHHHHHTHHHHTCCHHHHGGGGTCEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCCCCcCC-----CcccchhHHHHHHHHhCCCHHHHHHhcCchh
Confidence 35799999999999999999999 999999999975433222 3567788888 89888432211133222111
Q ss_pred Ccc--ccccccC---CCCce-eEeecC---------------------C-c--------------------ccccCCCCe
Q 024233 94 GDR--INGLVDG---ISGSW-YIKFDT---------------------F-T--------------------PAAEKGLPV 125 (270)
Q Consensus 94 ~~~--~~~~~~~---~~~~~-~~~~~~---------------------~-~--------------------~~~~~~~~~ 125 (270)
... +..+... ..... ...+.. . . .......+.
T Consensus 79 ~~g~~~~~w~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 158 (538)
T 2aqj_A 79 KAAIKFVNWRKSPDPSRDDHFYHLFGNVPNCDGVPLTHYWLRKREQGFQQPMEYACYPQPGALDGKLAPCLSDGTRQMSH 158 (538)
T ss_dssp ECEEEEESCSSSCCTTSCCEEEEESSCCCEETTEEHHHHHHHHHHTTCCSCHHHHHCSCHHHHHTTBCSBCTTCCBCSCC
T ss_pred hCCccccCcCcccccCCCCceECCCCccCccccCchhHHHHHhcccccccCccccccccccHhhhccchHhhcCCcCCCc
Confidence 100 0000000 00000 000000 0 0 000012345
Q ss_pred EEEEeHHHHHHHHHHhc---CCccEEeCceEEEEEecCCe--EEEEEcCCcEEeccEEEecCCCCchhhccccCCCCccc
Q 024233 126 TRVISRMTLQQILAKAV---GDEIILNESNVIDFKDHGDK--VSVVLENGQCYAGDLLVGADGIWSKVRKNLFGPQEAIF 200 (270)
Q Consensus 126 ~~~i~~~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~--~~v~~~~g~~~~ad~vI~AdG~~S~vr~~~~~~~~~~~ 200 (270)
.+.++|..+.+.|.+.+ +.. ++.+ +|+++..++++ +.+.+.+|++++||+||+|||.+|.+|+.+++.....+
T Consensus 159 ~~~i~~~~l~~~L~~~a~~~gv~-~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~~~~~~lg~~~~~~ 236 (538)
T 2aqj_A 159 AWHFDAHLVADFLKRWAVERGVN-RVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGLLINQALKEPFIDM 236 (538)
T ss_dssp EEEECHHHHHHHHHHHHHHTTCE-EEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCCCCCCCTCCCEEEC
T ss_pred cEEEeHHHHHHHHHHHHHHCCCE-EEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchhhHHHHhCCCcccc
Confidence 78999999999998875 344 7778 89999886554 56888888889999999999999999877755432212
Q ss_pred c----ceEeEeeeecCCCccc-ccCceEEEeeCCceEEEEeCCCCe
Q 024233 201 S----GYTCYTGIADFVPADI-ESVGYRVFLGHKQYFVSSDVGAGK 241 (270)
Q Consensus 201 ~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~g~ 241 (270)
. ...++........... ........+.+.++++++|++++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~ 282 (538)
T 2aqj_A 237 SDYLLCDSAVASAVPNDDARDGVEPYTSSIAMNSGWTWKIPMLGRF 282 (538)
T ss_dssp TTTCCCCEEEEEEEECCHHHHCCCSSEEEEECSSEEEEEEEETTEE
T ss_pred ccccccceEEEEecccCCcccCCCCceeeeecCCceEEEecCCCce
Confidence 1 1122221111110000 111223345678899999998853
No 25
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.80 E-value=1e-17 Score=151.28 Aligned_cols=214 Identities=13% Similarity=0.090 Sum_probs=129.0
Q ss_pred CcceEEEEcCCHHHHHHHHHHHh---CCCcEEEEeccCccccCCCCcccceeechhHHH-HHHHcCcChHHH--HHHhcc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKR---KGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALA-ALEAIDLDVAEE--VMRAGC 91 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~---~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~-~l~~~~~~~~~~--l~~~~~ 91 (270)
..+||+|||||++|+++|+.|++ .|++|+|||+.+.+.... +..+.|+... +++.+ ++.+. +.....
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~~~~-----g~~~~p~~~~~~l~~l--Gi~~~~~~~~~~~ 96 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDIPTLGV-----GEATIPNLQTAFFDFL--GIPEDEWMRECNA 96 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCCCCCCC-----CEECCTHHHHHTHHHH--TCCHHHHHHHTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCCCccce-----eeeechhHHHHHHHHh--CCChHHHHHhcCC
Confidence 46899999999999999999999 999999999975433222 3567888888 99998 44443 444332
Q ss_pred ccCccccc-cccCC-------------CCceeEeecC----------------------C-c---c--------------
Q 024233 92 VTGDRING-LVDGI-------------SGSWYIKFDT----------------------F-T---P-------------- 117 (270)
Q Consensus 92 ~~~~~~~~-~~~~~-------------~~~~~~~~~~----------------------~-~---~-------------- 117 (270)
.....+.. .+... .......+.. . . .
T Consensus 97 ~~~~g~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 176 (550)
T 2e4g_A 97 SYKVAIKFINWRTAGEGTSEARELDGGPDHFYHSFGLLKYHEQIPLSHYWFDRSYRGKTVEPFDYACYKEPVILDANRSP 176 (550)
T ss_dssp EEECEEEEESSSSCCCCCSSCCEETTEESEEEEESSCCCEETTEEHHHHHHHHHHTTSCCCCHHHHHCSHHHHHHTTBCS
T ss_pred eEEEeeeEeecccccccccccccccCCCCeeEecCCccCCCCcccHHHHHHhhcccccccccccccccchhhHHHhhhhh
Confidence 21111100 01000 0000000000 0 0 0
Q ss_pred ---cccCCCCeEEEEeHHHHHHHHHHhc----CCccEEeCceEEEEEecCCe--EEEEEcCCcEEeccEEEecCCCCchh
Q 024233 118 ---AAEKGLPVTRVISRMTLQQILAKAV----GDEIILNESNVIDFKDHGDK--VSVVLENGQCYAGDLLVGADGIWSKV 188 (270)
Q Consensus 118 ---~~~~~~~~~~~i~~~~l~~~L~~~~----~~~~i~~~~~v~~i~~~~~~--~~v~~~~g~~~~ad~vI~AdG~~S~v 188 (270)
......+.++.+++..+.+.|.+.+ +.. ++++ +|+++..++++ +.+.+.+|++++||+||+|||.+|.+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~Gv~-i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~~ 254 (550)
T 2e4g_A 177 RRLDGSKVTNYAWHFDAHLVADFLRRFATEKLGVR-HVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGLL 254 (550)
T ss_dssp BCTTSCBCSCCEEEECHHHHHHHHHHHHHHHSCCE-EEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCCC
T ss_pred HhhcCCCCCCcceEEcHHHHHHHHHHHHHhcCCcE-EEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchhh
Confidence 0000234468899999999998875 444 8888 99999886554 56888888889999999999999999
Q ss_pred hccccCCCCccccc----eEeEeeeecCC-CcccccCceEEEeeCCceEEEEeCCCC
Q 024233 189 RKNLFGPQEAIFSG----YTCYTGIADFV-PADIESVGYRVFLGHKQYFVSSDVGAG 240 (270)
Q Consensus 189 r~~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~g 240 (270)
++.+++.....+.. ..++....... +.............+.++++++|+++.
T Consensus 255 ~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ipl~~~ 311 (550)
T 2e4g_A 255 INKAMEEPFLDMSDHLLNDSAVATQVPHDDDANGVEPFTSAIAMKSGWTWKIPMLGR 311 (550)
T ss_dssp CCCCTCCCEEECTTTCCCCEEEEEEEECCHHHHCCCSSEEEEECSSEEEEEEECSSE
T ss_pred HHHHhCCCcccccccccccceEEEeecccCCcccCCCceeeeecCCceEEEccCCCc
Confidence 66554433211111 11111111111 100011222344457888999999873
No 26
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.78 E-value=5.8e-17 Score=147.07 Aligned_cols=218 Identities=13% Similarity=0.079 Sum_probs=125.6
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhC------CCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhcc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRK------GFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGC 91 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~------g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~ 91 (270)
+.+||+|||||++|+++|+.|+++ |++|+||||.+....... .+..+.+++++.| + ..+. +.+.
T Consensus 34 ~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~---~g~~l~~~~l~~l--l--~~~~---~~g~ 103 (584)
T 2gmh_A 34 EEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTL---SGACLDPRAFEEL--F--PDWK---EKGA 103 (584)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCC---CCCEECTHHHHHH--C--TTHH---HHTC
T ss_pred cCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccc---cccccCHHHHHHH--H--HHHH---hcCC
Confidence 358999999999999999999999 999999999864322111 1344777776655 3 2222 2222
Q ss_pred ccCccc----cccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhc---CCccEEeCceEEEEEecCC-eE
Q 024233 92 VTGDRI----NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDHGD-KV 163 (270)
Q Consensus 92 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~-~~ 163 (270)
...... ..+.. ... ...++.... .....+..+.++|..|.+.|.+++ +.. ++++++|+++..+++ .+
T Consensus 104 ~~~~~~~~~~~~~~~-~~~--~~~~~~~~~-~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~-i~~g~~v~~l~~~~~g~V 178 (584)
T 2gmh_A 104 PLNTPVTEDRFGILT-EKY--RIPVPILPG-LPMNNHGNYVVRLGHLVSWMGEQAEALGVE-VYPGYAAAEILFHEDGSV 178 (584)
T ss_dssp CCCEECCEEEEEEEC-SSC--EEECCCCTT-STTCCTTCEECCHHHHHHHHHHHHHHTTCE-EETTCCEEEEEECTTSSE
T ss_pred ceeeeechhheeeec-cCC--CccccccCc-cccccCCCEEEeHHHHHHHHHHHHHHcCCE-EEcCCEEEEEEEcCCCCE
Confidence 111000 00111 001 111110000 001112247899999999998875 444 999999999988764 45
Q ss_pred E-EEEc------CC---------cEEeccEEEecCCCCchhhcccc---CCC---CccccceEeEeeeecCCCcccccCc
Q 024233 164 S-VVLE------NG---------QCYAGDLLVGADGIWSKVRKNLF---GPQ---EAIFSGYTCYTGIADFVPADIESVG 221 (270)
Q Consensus 164 ~-v~~~------~g---------~~~~ad~vI~AdG~~S~vr~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (270)
. |.+. +| .+++||+||+|||.+|.+|+++. +.. .+.+.+. .+..+....+.......
T Consensus 179 ~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~vr~~l~~~~gl~~~~~p~~~g~-g~~~~~~v~~~~~~~~~ 257 (584)
T 2gmh_A 179 KGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQTYGI-GLKELWVIDEKKWKPGR 257 (584)
T ss_dssp EEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCHHHHHHHHHTTTTTTSCCCCEEE-EEEEEEECCGGGCCTTE
T ss_pred EEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCchHHHHHHHHhCCCCCCCchhHHh-hhhhheecCcccccCCe
Confidence 4 6655 23 68999999999999999999872 222 2222221 22222221111112222
Q ss_pred eEEEee------CCceEEEEeCC--CCeEEEEEEEeCC
Q 024233 222 YRVFLG------HKQYFVSSDVG--AGKMQWYAFNKEP 251 (270)
Q Consensus 222 ~~~~~~------~~~~~~~~p~~--~g~~~~~~~~~~~ 251 (270)
...+++ ..+..+++|.+ ++++++++.....
T Consensus 258 ~~~~~g~~~~~~~~gg~~~~~~~~~~~~~~vg~~~~~~ 295 (584)
T 2gmh_A 258 VDHTVGWPLDRHTYGGSFLYHLNEGEPLLALGFVVGLD 295 (584)
T ss_dssp EEEEEETTSCTTSCEEEEEEECCSSSCEEEEEEEEETT
T ss_pred EEEEEeccccCCcCCceEEEEecCCCCeEEEEEEEecC
Confidence 223322 12334567888 7888877776554
No 27
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=99.72 E-value=2.8e-17 Score=141.83 Aligned_cols=193 Identities=17% Similarity=0.118 Sum_probs=114.6
Q ss_pred ceEEEEcCCHHHHHHHHHHHhC--CCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChH-HH-HHHhccccCc
Q 024233 20 LRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVA-EE-VMRAGCVTGD 95 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~--g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~-~~-l~~~~~~~~~ 95 (270)
.||+|||||++|+++|+.|+++ |++|+||||.+... .. ++++.+.+++.+ ...+.+++ +. +........
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~-~~---g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~- 73 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQE-VL---GWGVVLPGRPGQ--HPANPLSYLDAPERLNPQFLE- 73 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTC-CC---CSEEEEESCTTT--CTTCGGGGSSCGGGGCCEEEC-
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCC-cc---eeEEEeCcHHHH--hhcCcchhhhhhHHHhhcccc-
Confidence 4899999999999999999999 99999999986542 22 235777777655 12222222 11 111111000
Q ss_pred cccccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCC--ccEEeCceEEEEEecCCeEEEEEcCCcEE
Q 024233 96 RINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGD--EIILNESNVIDFKDHGDKVSVVLENGQCY 173 (270)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~~~v~~~~g~~~ 173 (270)
.+ .+.. .+... ....+.++ ..++|..|.+.|.+.+.. ..++++++|++++.. .++
T Consensus 74 ~~-~~~~--~g~~~--------~~~~~~~~-~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-----------~~~ 130 (381)
T 3c4a_A 74 DF-KLVH--HNEPS--------LMSTGVLL-CGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL-----------PLA 130 (381)
T ss_dssp CE-EEEE--SSSEE--------ECCCCSCE-EEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC-----------CGG
T ss_pred ce-EEEe--CCeeE--------EecCCCce-eeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc-----------ccc
Confidence 00 0111 11111 01113343 689999999999988532 138999999988642 136
Q ss_pred eccEEEecCCCCchhhcccc---CCCCccccceEeEeeeecCCCcccccCceEEEeeCCceE--EEEeCCCCeEEEEEE
Q 024233 174 AGDLLVGADGIWSKVRKNLF---GPQEAIFSGYTCYTGIADFVPADIESVGYRVFLGHKQYF--VSSDVGAGKMQWYAF 247 (270)
Q Consensus 174 ~ad~vI~AdG~~S~vr~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~p~~~g~~~~~~~ 247 (270)
+||+||+|||.+|. |+.+. +...+.+.+..+|.+..... ......+.+.+.+++ .++|+++++..+++.
T Consensus 131 ~ad~vV~AdG~~S~-R~~l~~~~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~ 204 (381)
T 3c4a_A 131 DYDLVVLANGVNHK-TAHFTEALVPQVDYGRNKYIWYGTSQLF----DQMNLVFRTHGKDIFIAHAYKYSDTMSTFIVE 204 (381)
T ss_dssp GCSEEEECCGGGGG-TCCSSGGGCCCCEEEEEEEEEEEESSCC----SSEEEEEEEETTEEEEEEEEECSSSCEEEEEE
T ss_pred cCCEEEECCCCCch-HHhhhhhcCCCcccCCccEEEEecCCCC----CcceeeEeeCCCcEEEEEEEEecCCeEEEEEE
Confidence 89999999999999 99873 22222334556666653221 111111112344543 368999887654443
No 28
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.70 E-value=1.6e-16 Score=136.65 Aligned_cols=65 Identities=18% Similarity=0.329 Sum_probs=53.8
Q ss_pred EEEEeHHHHHHHHHHhc---CCccEEeCceEEEEEecCCeEEEEEcCCcEEeccEEEecCCCCch-hhccc
Q 024233 126 TRVISRMTLQQILAKAV---GDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLVGADGIWSK-VRKNL 192 (270)
Q Consensus 126 ~~~i~~~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~ad~vI~AdG~~S~-vr~~~ 192 (270)
...+++..+.+.|.+.+ +.. ++++++|+++..+++++.|.+.+| +++||.||+|+|.||. +.+.+
T Consensus 148 ~~~~~~~~~~~~l~~~a~~~Gv~-i~~~~~V~~i~~~~~~~~V~t~~g-~i~a~~VV~A~G~~s~~l~~~~ 216 (381)
T 3nyc_A 148 GADIDTDALHQGYLRGIRRNQGQ-VLCNHEALEIRRVDGAWEVRCDAG-SYRAAVLVNAAGAWCDAIAGLA 216 (381)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCE-EESSCCCCEEEEETTEEEEECSSE-EEEESEEEECCGGGHHHHHHHH
T ss_pred CceECHHHHHHHHHHHHHHCCCE-EEcCCEEEEEEEeCCeEEEEeCCC-EEEcCEEEECCChhHHHHHHHh
Confidence 45678899999988875 444 889999999999888888888877 8999999999999995 44433
No 29
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.70 E-value=2.4e-15 Score=130.31 Aligned_cols=170 Identities=19% Similarity=0.159 Sum_probs=96.4
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccc--cCCCCcccceee---chhHHH-HHHHcCcChHHHHHHhcc-
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAI--RGEGQYRGPIQI---QSNALA-ALEAIDLDVAEEVMRAGC- 91 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~--~~~g~~~~~~~l---~~~~~~-~l~~~~~~~~~~l~~~~~- 91 (270)
.+||+|||||++|+++|+.|+++|++|+|||+..... ..++...+.+.. .+.... .+..+ ..++++.+...
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~~~~~gas~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~ 81 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTFFNENGGTSGAERHWRLQYTQEDLFRLTLETL--PLWRALESRCER 81 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTCSSSSCCSSEEEECSCCSSHHHHHHHHHHH--HHHHHHHHHHTC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCCCCCcCeEEEeccCcchhhhHHHHHH--HHHHHHHHHhCc
Confidence 4799999999999999999999999999999986543 222211111111 111111 11222 34444433211
Q ss_pred cc--CccccccccCCC-----------------CceeEeec---------CCccc---ccCCCCeEEEEeHHHHHHHHHH
Q 024233 92 VT--GDRINGLVDGIS-----------------GSWYIKFD---------TFTPA---AEKGLPVTRVISRMTLQQILAK 140 (270)
Q Consensus 92 ~~--~~~~~~~~~~~~-----------------~~~~~~~~---------~~~~~---~~~~~~~~~~i~~~~l~~~L~~ 140 (270)
.. ......+..... +.....++ ..... ...-.+....+++..+.+.|.+
T Consensus 82 ~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~ 161 (397)
T 2oln_A 82 RLIHEIGSLWFGDTDVVTNEGQISGTAAMMDKLSVRYEWLKATDIERRFGFRGLPRDYEGFLQPDGGTIDVRGTLAALFT 161 (397)
T ss_dssp CCEECCCEEEEECSSCCBTTBCHHHHHHHHHHTTCCCEEEEHHHHHHHHCCCSCCTTCEEEEETTCEEEEHHHHHHHHHH
T ss_pred cHHHHCCcEEEcCCCccchhHHHHHHHHHHHHcCCCceecCHHHHHhhCcCccCCCceeEEEcCCCCEEcHHHHHHHHHH
Confidence 10 000000000000 00000000 00000 0000122346788888888877
Q ss_pred hc---CCccEEeCceEEEEEecCCeEEEEEcCCcEEeccEEEecCCCCc-hhhccc
Q 024233 141 AV---GDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLVGADGIWS-KVRKNL 192 (270)
Q Consensus 141 ~~---~~~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~ad~vI~AdG~~S-~vr~~~ 192 (270)
.+ +.. ++++++|++++.+++++.+.+.++ +++||.||+|+|.+| .+++.+
T Consensus 162 ~a~~~Gv~-i~~~~~V~~i~~~~~~v~v~t~~g-~i~a~~VV~A~G~~s~~l~~~~ 215 (397)
T 2oln_A 162 LAQAAGAT-LRAGETVTELVPDADGVSVTTDRG-TYRAGKVVLACGPYTNDLLEPL 215 (397)
T ss_dssp HHHHTTCE-EEESCCEEEEEEETTEEEEEESSC-EEEEEEEEECCGGGHHHHHGGG
T ss_pred HHHHcCCE-EECCCEEEEEEEcCCeEEEEECCC-EEEcCEEEEcCCcChHHHhhhc
Confidence 64 444 899999999999888888877665 799999999999995 466654
No 30
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.70 E-value=1e-15 Score=132.07 Aligned_cols=220 Identities=13% Similarity=0.113 Sum_probs=116.5
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccc--cCCCCccccee----echhHHHH-HHHcCcChHHHHHHhcc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAI--RGEGQYRGPIQ----IQSNALAA-LEAIDLDVAEEVMRAGC 91 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~--~~~g~~~~~~~----l~~~~~~~-l~~~~~~~~~~l~~~~~ 91 (270)
.+||+|||||++|+++|+.|+++|++|+|||+..... ..++...+.+. ..+...++ ...+ ..++.+.+...
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~l~~~~~ 80 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPHTNGSHHGDTRIIRHAYGEGREYVPLALRSQ--ELWYELEKETH 80 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSSCSSSSSCSSEEEECSSCTTCGGGHHHHHHHH--HHHHHHHHHCS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCcchhhhhhhcCCchHHHHHHHHH--HHHHHHHHHhC
Confidence 5799999999999999999999999999999986543 22222111111 01111121 1122 44444443221
Q ss_pred ccC---cccccccc-----------------CCCCceeEe------ecCCccc---ccCCCCeEEEEeHHHHHHHHHHhc
Q 024233 92 VTG---DRINGLVD-----------------GISGSWYIK------FDTFTPA---AEKGLPVTRVISRMTLQQILAKAV 142 (270)
Q Consensus 92 ~~~---~~~~~~~~-----------------~~~~~~~~~------~~~~~~~---~~~~~~~~~~i~~~~l~~~L~~~~ 142 (270)
... .....+.. +...+.+.. ++..... ...-.+....+++..+.+.|.+.+
T Consensus 81 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 160 (389)
T 2gf3_A 81 HKIFTKTGVLVFGPKGESAFVAETMEAAKEHSLTVDLLEGDEINKRWPGITVPENYNAIFEPNSGVLFSENCIRAYRELA 160 (389)
T ss_dssp SCCEECCCEEEEEETTCCHHHHHHHHHHHHTTCCCEEEETHHHHHHSTTCCCCTTEEEEEETTCEEEEHHHHHHHHHHHH
T ss_pred CcceeecceEEEcCCCchHHHHHHHHHHHHcCCCcEEcCHHHHHHhCCCcccCCCceEEEeCCCcEEeHHHHHHHHHHHH
Confidence 000 00000000 000000000 0000000 000012235678889999888875
Q ss_pred ---CCccEEeCceEEEEEecCCeEEEEEcCCcEEeccEEEecCCCCch-hhccccCCCCccc--cceEeEeeeecCCCcc
Q 024233 143 ---GDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLVGADGIWSK-VRKNLFGPQEAIF--SGYTCYTGIADFVPAD 216 (270)
Q Consensus 143 ---~~~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~ad~vI~AdG~~S~-vr~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 216 (270)
+.. ++.+++|++++.+++++.+.+.++ +++||.||+|+|.+|. +.+.+ +...|.. .+++.+. +..+..
T Consensus 161 ~~~Gv~-i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~~~~l~~~~-g~~~pl~~~rg~~~~~---~~~~~~ 234 (389)
T 2gf3_A 161 EARGAK-VLTHTRVEDFDISPDSVKIETANG-SYTADKLIVSMGAWNSKLLSKL-NLDIPLQPYRQVVGFF---ESDESK 234 (389)
T ss_dssp HHTTCE-EECSCCEEEEEECSSCEEEEETTE-EEEEEEEEECCGGGHHHHGGGG-TEECCCEEEEEEEEEE---CCCHHH
T ss_pred HHCCCE-EEcCcEEEEEEecCCeEEEEeCCC-EEEeCEEEEecCccHHHHhhhh-ccCCceEEEEEEEEEE---ecCccc
Confidence 344 888999999999888888877666 7999999999999986 33333 2112222 2222221 111100
Q ss_pred c---ccCceEEEeeCCceEEEEeCCCC-eEEEEE
Q 024233 217 I---ESVGYRVFLGHKQYFVSSDVGAG-KMQWYA 246 (270)
Q Consensus 217 ~---~~~~~~~~~~~~~~~~~~p~~~g-~~~~~~ 246 (270)
. ......++..+...+++.|.++| ++.+..
T Consensus 235 ~~~~~~~p~~~~~~~~~~~y~~p~~~g~~~~iG~ 268 (389)
T 2gf3_A 235 YSNDIDFPGFMVEVPNGIYYGFPSFGGCGLKLGY 268 (389)
T ss_dssp HBGGGTCCEEEEEETTEEEEEECBSTTCCEEEEE
T ss_pred ccccccCCEEEEeCCCCcEEEcCCCCCCcEEEEE
Confidence 0 01112233334446777899888 776654
No 31
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.70 E-value=6.4e-16 Score=133.10 Aligned_cols=223 Identities=16% Similarity=0.164 Sum_probs=115.9
Q ss_pred CCCCCcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeec-----hhH-----HHHHHHcCcChH
Q 024233 14 DSENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQ-----SNA-----LAALEAIDLDVA 83 (270)
Q Consensus 14 ~~~~~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~-----~~~-----~~~l~~~~~~~~ 83 (270)
.+.+.++||+|||||++|+++|+.|+++|++|+|||+.......++...+.+... +.. ...++.+. .+.
T Consensus 12 ~~~~~~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~ 90 (382)
T 1ryi_A 12 RAMKRHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGTMGGRTTSAAAGMLGAHAECEERDAFFDFAMHSQRLYK-GLG 90 (382)
T ss_dssp --CCSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTTTHHHHCCCBCCGGGSCSSCSHHHHHHHHHHHHTT-THH
T ss_pred hccCCCCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCcccchhcCceeccCccCCCCcHHHHHHHHHHHHHH-HHH
Confidence 3345678999999999999999999999999999999864332222222222111 011 11122221 222
Q ss_pred HHHHHh-ccccCcccccccc-CCC--------------CceeEeec-------CCcc--cccCCCCeEEEEeHHHHHHHH
Q 024233 84 EEVMRA-GCVTGDRINGLVD-GIS--------------GSWYIKFD-------TFTP--AAEKGLPVTRVISRMTLQQIL 138 (270)
Q Consensus 84 ~~l~~~-~~~~~~~~~~~~~-~~~--------------~~~~~~~~-------~~~~--~~~~~~~~~~~i~~~~l~~~L 138 (270)
+.+.+. +........+... ... ........ .... ......+....+++..+.+.|
T Consensus 91 ~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l 170 (382)
T 1ryi_A 91 EELYALSGVDIRQHNGGMFKLAFSEEDVLQLRQMDDLDSVSWYSKEEVLEKEPYASGDIFGASFIQDDVHVEPYFVCKAY 170 (382)
T ss_dssp HHHHHHHCCCCCCBCCCEEEEESSHHHHHHHHTTTTSTTEEEEEHHHHHHHCTTSCTTCCEEEEETTCCBCCHHHHHHHH
T ss_pred HHHHHhhCCCcCeeecceEEEEeCHHHHHHHHHHhhcCCeEEECHHHHHHhCCCCCcccceEEEeCCCeEEcHHHHHHHH
Confidence 222111 1111000000000 000 00000000 0000 000001122456788898888
Q ss_pred HHhc---CCccEEeCceEEEEEecCCeEEEEEcCCcEEeccEEEecCCCCch-hhccccCCCCccccceEeEeeeecCCC
Q 024233 139 AKAV---GDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLVGADGIWSK-VRKNLFGPQEAIFSGYTCYTGIADFVP 214 (270)
Q Consensus 139 ~~~~---~~~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~ad~vI~AdG~~S~-vr~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (270)
.+.+ +.. ++.+++|+++..+++++.+.+.+| +++||.||+|+|.+|. +++.+ +...+......... ..+. +
T Consensus 171 ~~~~~~~g~~-i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~s~~l~~~~-~~~~~~~~~~g~~~-~~~~-~ 245 (382)
T 1ryi_A 171 VKAAKMLGAE-IFEHTPVLHVERDGEALFIKTPSG-DVWANHVVVASGVWSGMFFKQL-GLNNAFLPVKGECL-SVWN-D 245 (382)
T ss_dssp HHHHHHTTCE-EETTCCCCEEECSSSSEEEEETTE-EEEEEEEEECCGGGTHHHHHHT-TCCCCCEEEEEEEE-EEEC-C
T ss_pred HHHHHHCCCE-EEcCCcEEEEEEECCEEEEEcCCc-eEEcCEEEECCChhHHHHHHhc-CCCCceeccceEEE-EECC-C
Confidence 8875 344 888999999998888888877777 8999999999999987 66554 22222222111111 1111 1
Q ss_pred cccccCceEEEeeCCceEEEEeCCCCeEEEEEE
Q 024233 215 ADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAF 247 (270)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~ 247 (270)
..... . +++.. ..++.|.++|++.+...
T Consensus 246 ~~~~~-~--~~~~~--~~~~~p~~~g~~~vG~~ 273 (382)
T 1ryi_A 246 DIPLT-K--TLYHD--HCYIVPRKSGRLVVGAT 273 (382)
T ss_dssp SSCCC-S--EEEET--TEEEEECTTSEEEEECC
T ss_pred CCCcc-c--eEEcC--CEEEEEcCCCeEEEeec
Confidence 11111 1 23333 45567888887766654
No 32
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.70 E-value=2.6e-15 Score=130.26 Aligned_cols=224 Identities=17% Similarity=0.165 Sum_probs=119.7
Q ss_pred CCcceEEEEcCCHHHHHHHHHHHh-CC-CcEEEEeccCccccCCCCccccee---echhHHHHHHHcCcChHHHHHHhcc
Q 024233 17 NKKLRILVAGGGIGGLVFALAAKR-KG-FEVLVFEKDMSAIRGEGQYRGPIQ---IQSNALAALEAIDLDVAEEVMRAGC 91 (270)
Q Consensus 17 ~~~~dV~IIGgG~aGl~~A~~La~-~g-~~V~viE~~~~~~~~~g~~~~~~~---l~~~~~~~l~~~~~~~~~~l~~~~~ 91 (270)
+.++||+|||||++|+++|+.|++ +| ++|+|||+.......++...+.+. ..+....+... ....+..+.+...
T Consensus 19 ~~~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~~~~gas~~~~g~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~ 97 (405)
T 2gag_B 19 KKSYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGWLAGGNMARNTTIIRSNYLWDESAGIYEK-SLKLWEQLPEDLE 97 (405)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSSTTCSGGGTSCCCBCCCCSSHHHHHHHHH-HHHHHHHHHHHTT
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCCCCCCcccccCceeeecCCCHHHHHHHHH-HHHHHHHHHHHhC
Confidence 457899999999999999999999 99 999999998744333333222222 11222222211 0133333332211
Q ss_pred -ccCccccccc---------------------cCCCCceeEe------ecCCcc--------cccCCCCeEEEEeHHHHH
Q 024233 92 -VTGDRINGLV---------------------DGISGSWYIK------FDTFTP--------AAEKGLPVTRVISRMTLQ 135 (270)
Q Consensus 92 -~~~~~~~~~~---------------------~~~~~~~~~~------~~~~~~--------~~~~~~~~~~~i~~~~l~ 135 (270)
.......+.. .+...+.+.. ++.... ....-.+....+++..+.
T Consensus 98 ~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (405)
T 2gag_B 98 YDFLFSQRGVLNLAHTLGDVRESVRRVEANKLNGVDAEWLDPSQVKEACPIINTSDDIRYPVMGATWQPRAGIAKHDHVA 177 (405)
T ss_dssp CCCCCBCCCEEEEECSHHHHHHHHHHHHHHHTBTCCCEEECHHHHHHHCTTSCCSTTSSSCCCEEEEETTCBBCCHHHHH
T ss_pred CCcCEecccEEEEEcCHHHHHHHHHHHHHHHhcCCCceEeCHHHHHhhCCCCcccccccccceeEEEeCCCccCCHHHHH
Confidence 1000000000 0000000000 000000 000001112455677888
Q ss_pred HHHHHhc---CCccEEeCceEEEEEecCCe-EEEEEcCCcEEeccEEEecCCCCc-hhhccccCCCCccccceEeEeeee
Q 024233 136 QILAKAV---GDEIILNESNVIDFKDHGDK-VSVVLENGQCYAGDLLVGADGIWS-KVRKNLFGPQEAIFSGYTCYTGIA 210 (270)
Q Consensus 136 ~~L~~~~---~~~~i~~~~~v~~i~~~~~~-~~v~~~~g~~~~ad~vI~AdG~~S-~vr~~~~~~~~~~~~~~~~~~~~~ 210 (270)
+.|.+.+ +.. ++.+++|+++..++++ +.+.+.+| +++||.||+|+|.+| .+++.+ +...|.......+. +.
T Consensus 178 ~~l~~~~~~~g~~-i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~~l~~~~-g~~~~~~~~~~~~~-~~ 253 (405)
T 2gag_B 178 WAFARKANEMGVD-IIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHSSVLAEMA-GFELPIQSHPLQAL-VS 253 (405)
T ss_dssp HHHHHHHHHTTCE-EECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGHHHHHHHH-TCCCCEEEEEEEEE-EE
T ss_pred HHHHHHHHHCCCE-EEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhHHHHHHHc-CCCCCccccceeEE-Ee
Confidence 8887764 444 8889999999987766 45777777 799999999999999 566554 33334332211111 11
Q ss_pred cCCCcccccCceEEEeeCCceEEEEeCCCCeEEEEEEEe
Q 024233 211 DFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFNK 249 (270)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~ 249 (270)
+..+.. .. .+++..+..+++.|.++|++.+.....
T Consensus 254 ~~~~~~--~~--~~~~~~~~~~y~~p~~~g~~~ig~~~~ 288 (405)
T 2gag_B 254 ELFEPV--HP--TVVMSNHIHVYVSQAHKGELVMGAGID 288 (405)
T ss_dssp EEBCSC--CC--SEEEETTTTEEEEECTTSEEEEEEEEC
T ss_pred cCCccc--cC--ceEEeCCCcEEEEEcCCCcEEEEeccC
Confidence 111111 11 133344556777898899887776654
No 33
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.69 E-value=5.3e-16 Score=133.66 Aligned_cols=172 Identities=17% Similarity=0.221 Sum_probs=95.7
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceee---chhHHHHHHHcCcChHHHHHHhccc--
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQI---QSNALAALEAIDLDVAEEVMRAGCV-- 92 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l---~~~~~~~l~~~~~~~~~~l~~~~~~-- 92 (270)
..+||+|||||++|+++|+.|+++|++|+|||+.......++...+.+.. .+....+... ....+..+.+....
T Consensus 4 ~~~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~~~~gas~~~~g~~~~~~~~~~~~~l~~~-~~~~~~~l~~~~~~~~ 82 (382)
T 1y56_B 4 EKSEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRFIGSGSTFRCGTGIRQQFNDEANVRVMKR-SVELWKKYSEEYGFSF 82 (382)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCSHHHHCCCCCCCCCSSHHHHHHHHH-HHHHHHHHHHHHTCCE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCCccccccCeeeecCCChHHHHHHHH-HHHHHHHHHHHhCCCe
Confidence 45899999999999999999999999999999985432222222222211 1111111110 01233333221100
Q ss_pred cCccccccc------------------cCCCCceeEe------ecCCc---ccccCCCCeEEEEeHHHHHHHHHHhc---
Q 024233 93 TGDRINGLV------------------DGISGSWYIK------FDTFT---PAAEKGLPVTRVISRMTLQQILAKAV--- 142 (270)
Q Consensus 93 ~~~~~~~~~------------------~~~~~~~~~~------~~~~~---~~~~~~~~~~~~i~~~~l~~~L~~~~--- 142 (270)
......... .+...+.+.. ++... .....-.+....+++..+.+.|.+.+
T Consensus 83 ~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 162 (382)
T 1y56_B 83 KQTGYLFLLYDDEEVKTFKRNIEIQNKFGVPTKLITPEEAKEIVPLLDISEVIAASWNPTDGKADPFEATTAFAVKAKEY 162 (382)
T ss_dssp ECCCEEEEECSHHHHHHHHHHHHHHHHTTCCCEEECHHHHHHSSTTCCCTTCCEEEEETTCCEECHHHHHHHHHHHHHHT
T ss_pred eccceEEEEeCHHHHHHHHHHHHHHHhcCCCcEEeCHHHHHHhCCCCCcccceEEEEcCCCeeECHHHHHHHHHHHHHHC
Confidence 000000000 0000000000 00000 00000011224578889988888764
Q ss_pred CCccEEeCceEEEEEecCCeEE-EEEcCCcEEeccEEEecCCCCch-hhccc
Q 024233 143 GDEIILNESNVIDFKDHGDKVS-VVLENGQCYAGDLLVGADGIWSK-VRKNL 192 (270)
Q Consensus 143 ~~~~i~~~~~v~~i~~~~~~~~-v~~~~g~~~~ad~vI~AdG~~S~-vr~~~ 192 (270)
+.. ++.+++|+++..+++++. +.+.+| +++||.||+|+|.+|. +.+.+
T Consensus 163 Gv~-i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s~~l~~~~ 212 (382)
T 1y56_B 163 GAK-LLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWANLINAMA 212 (382)
T ss_dssp TCE-EECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGHHHHHHHH
T ss_pred CCE-EECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhHHHHHHHc
Confidence 444 888999999999888887 877777 7999999999999995 45443
No 34
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.69 E-value=3.6e-16 Score=144.64 Aligned_cols=170 Identities=14% Similarity=0.138 Sum_probs=97.8
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccc-cCCCCcccceeec----h-hHHHHHHH---cCcChHHHHHH
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAI-RGEGQYRGPIQIQ----S-NALAALEA---IDLDVAEEVMR 88 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~-~~~g~~~~~~~l~----~-~~~~~l~~---~~~~~~~~l~~ 88 (270)
..+||+|||||++|+++|+.|+++|++|+|||+..... +.++...+.+... . ...++... ....+++.+..
T Consensus 263 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~l~~ 342 (689)
T 3pvc_A 263 RCDDIAIIGGGIVSALTALALQRRGAVVTLYCADAQPAQGASGNRQGALYPLLNGKNDALETFFTSAFTFARRQYDQLLE 342 (689)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSSSTTCSGGGCSCEEECCCCCSSCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCCccccccccccCCEEecCCCCCChHHHHHHHHHHHHHHHHHHHhhh
Confidence 45899999999999999999999999999999975332 2333332222211 1 11111110 01123333312
Q ss_pred hccccCcccccccc-----------------CCCCce--eEee-------cCCcccccCCCCeEEEEeHHHHHHHHHHhc
Q 024233 89 AGCVTGDRINGLVD-----------------GISGSW--YIKF-------DTFTPAAEKGLPVTRVISRMTLQQILAKAV 142 (270)
Q Consensus 89 ~~~~~~~~~~~~~~-----------------~~~~~~--~~~~-------~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~ 142 (270)
.+........+... +..... .... +..........+.+..+++..+.+.|.+.+
T Consensus 343 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~~~l~~~~gg~~~p~~g~v~p~~l~~aL~~~a 422 (689)
T 3pvc_A 343 QGIAFDHQWCGVSQLAFDDKSRGKIEKMLHTQWPVEFAEAMSREQLSELAGLDCAHDGIHYPAGGWLCPSDLTHALMMLA 422 (689)
T ss_dssp TTCCCCEECCCEEEECCSHHHHHHHHHHTTSCCCTTTCEEECHHHHHHHHSSCCSSCEEEETTCEEECHHHHHHHHHHHH
T ss_pred hccccccccCceEEeccCHHHHHHHHHHHhcCCChHHhhccCHHHHHHhcCCCcccceEEecCCeEECHHHHHHHHHHHH
Confidence 11111000000000 000000 0000 000000011123346778899999998864
Q ss_pred ---CCccEEeCceEEEEEecCCeEEEEEcCCc-EEeccEEEecCCCCchh
Q 024233 143 ---GDEIILNESNVIDFKDHGDKVSVVLENGQ-CYAGDLLVGADGIWSKV 188 (270)
Q Consensus 143 ---~~~~i~~~~~v~~i~~~~~~~~v~~~~g~-~~~ad~vI~AdG~~S~v 188 (270)
+.. ++++++|+++..++++|.|.+.+|+ +++||.||+|+|.+|..
T Consensus 423 ~~~Gv~-i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~s~~ 471 (689)
T 3pvc_A 423 QQNGMT-CHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHRLPE 471 (689)
T ss_dssp HHTTCE-EEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGGTTC
T ss_pred HhCCCE-EEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcchhc
Confidence 444 8999999999998888999988887 89999999999999863
No 35
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.67 E-value=2.3e-15 Score=132.11 Aligned_cols=61 Identities=11% Similarity=0.123 Sum_probs=52.7
Q ss_pred EEEeHHHHHHHHHHhc---CCccEEeCc---eEEEEEecCCeEE-EEEcCCcEEeccEEEecCCCCchh
Q 024233 127 RVISRMTLQQILAKAV---GDEIILNES---NVIDFKDHGDKVS-VVLENGQCYAGDLLVGADGIWSKV 188 (270)
Q Consensus 127 ~~i~~~~l~~~L~~~~---~~~~i~~~~---~v~~i~~~~~~~~-v~~~~g~~~~ad~vI~AdG~~S~v 188 (270)
..++...+.+.|.+.+ +.. +++++ +|++|..++++++ |.+.+|++++||.||+|+|.+|.-
T Consensus 156 g~~~~~~~~~~L~~~a~~~Gv~-i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~~ 223 (438)
T 3dje_A 156 GWAHARNALVAAAREAQRMGVK-FVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASAGQ 223 (438)
T ss_dssp EEECHHHHHHHHHHHHHHTTCE-EEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGGGG
T ss_pred EEecHHHHHHHHHHHHHhcCCE-EEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCChhh
Confidence 5778888999888774 444 88999 9999999888888 899999889999999999999863
No 36
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.66 E-value=2.3e-15 Score=127.32 Aligned_cols=156 Identities=13% Similarity=0.069 Sum_probs=88.4
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCc-------c-cceeechhHHHHHHHcCcChHHHHHHhc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQY-------R-GPIQIQSNALAALEAIDLDVAEEVMRAG 90 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~-------~-~~~~l~~~~~~~l~~~~~~~~~~l~~~~ 90 (270)
++||+|||||++|+++|+.|+++|++|+||||.+......... . +...+......+.+.+ +.+....
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 76 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAV-----KQWQAQG 76 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHH-----HHHHHHT
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHH-----HHHHhCC
Confidence 3699999999999999999999999999999986432111100 0 0011111112222222 1111111
Q ss_pred cccCccccccccCCCCceeEeecCCcccccCCCC-eEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCeEEEEEcC
Q 024233 91 CVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLP-VTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLEN 169 (270)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~~ 169 (270)
........ +....... .. ......+ +.....-..+.+.|.+ +.. ++++++|++++.++++|.+++.+
T Consensus 77 ~~~~~~~~-~~~~~~~~-------~~-~~~~~~~~~~~~~~~~~l~~~l~~--g~~-i~~~~~v~~i~~~~~~~~v~~~~ 144 (336)
T 1yvv_A 77 HVAEWTPL-LYNFHAGR-------LS-PSPDEQVRWVGKPGMSAITRAMRG--DMP-VSFSCRITEVFRGEEHWNLLDAE 144 (336)
T ss_dssp SEEEECCC-EEEESSSB-------CC-CCCTTSCEEEESSCTHHHHHHHHT--TCC-EECSCCEEEEEECSSCEEEEETT
T ss_pred Ceeecccc-ceeccCcc-------cc-cCCCCCccEEcCccHHHHHHHHHc--cCc-EEecCEEEEEEEeCCEEEEEeCC
Confidence 11000000 00000000 00 0000111 1111133445555554 344 89999999999999999999999
Q ss_pred CcEEe-ccEEEecCCCCchhhcc
Q 024233 170 GQCYA-GDLLVGADGIWSKVRKN 191 (270)
Q Consensus 170 g~~~~-ad~vI~AdG~~S~vr~~ 191 (270)
|+.+. ||+||+|+|.+|.+|..
T Consensus 145 g~~~~~a~~vV~a~g~~~~~~~~ 167 (336)
T 1yvv_A 145 GQNHGPFSHVIIATPAPQASTLL 167 (336)
T ss_dssp SCEEEEESEEEECSCHHHHGGGG
T ss_pred CcCccccCEEEEcCCHHHHHHhh
Confidence 97664 99999999999998864
No 37
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.66 E-value=3e-15 Score=138.30 Aligned_cols=62 Identities=15% Similarity=0.105 Sum_probs=54.0
Q ss_pred EEEEeHHHHHHHHHHhc---CCccEEeCceEEEEEecCCeEEEEEcCCcEEeccEEEecCCCCchh
Q 024233 126 TRVISRMTLQQILAKAV---GDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLVGADGIWSKV 188 (270)
Q Consensus 126 ~~~i~~~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~ad~vI~AdG~~S~v 188 (270)
+..+++..+.+.|.+.+ +.. ++++++|+++..++++|.|.+.+|.+++||.||+|+|.+|..
T Consensus 411 ~g~v~p~~l~~aL~~~a~~~Gv~-i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~s~~ 475 (676)
T 3ps9_A 411 GGWLCPAELTRNVLELAQQQGLQ-IYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQISR 475 (676)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCE-EEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGGGGC
T ss_pred CeeeCHHHHHHHHHHHHHhCCCE-EEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcchhc
Confidence 46788899999998864 444 999999999999999999999888889999999999999863
No 38
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.66 E-value=1.3e-14 Score=124.47 Aligned_cols=165 Identities=17% Similarity=0.151 Sum_probs=93.9
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccc-e-e--ec--hhHHHH-HHHcCcChHHHHHHhcc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGP-I-Q--IQ--SNALAA-LEAIDLDVAEEVMRAGC 91 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~-~-~--l~--~~~~~~-l~~~~~~~~~~l~~~~~ 91 (270)
++||+|||||++|+++|++|+++|++|+|||+.......+...... + . .. +....+ ...+ ..+.++.+.+.
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~l~~~~~ 79 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSHHGDTRLIRHAYGEGEKYVPLVLRAQ--MLWDELSRHNE 79 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCSSSSSSSCCSSEEEECSSCTTCGGGHHHHHHHH--HHHHHHHTTCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCccceeeeccCCCchHHHHHHHHH--HHHHHHHHhCC
Confidence 4799999999999999999999999999999986543211111111 1 1 00 111111 1112 34444441111
Q ss_pred c-cCcccccc---ccCCC-------------CceeEeecCCc---------cc---ccCCCCeEEEEeHHHHHHHHHHhc
Q 024233 92 V-TGDRINGL---VDGIS-------------GSWYIKFDTFT---------PA---AEKGLPVTRVISRMTLQQILAKAV 142 (270)
Q Consensus 92 ~-~~~~~~~~---~~~~~-------------~~~~~~~~~~~---------~~---~~~~~~~~~~i~~~~l~~~L~~~~ 142 (270)
. ......+. ..... +......+... .. ...-.+....+++..+.+.|.+.+
T Consensus 80 ~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~ 159 (372)
T 2uzz_A 80 DDPIFVRSGVINLGPADSTFLANVAHSAEQWQLNVEKLDAQGIMARWPEIRVPDNYIGLFETDSGFLRSELAIKTWIQLA 159 (372)
T ss_dssp SSCSEECCCEEEEEETTCHHHHHHHHHHHHTTCCEEEEEHHHHHHHCTTCCCCTTEEEEEESSCEEEEHHHHHHHHHHHH
T ss_pred CccceeeeceEEEeCCCcHHHHHHHHHHHHcCCCcEecCHHHHHhhCCCccCCCCceEEEeCCCcEEcHHHHHHHHHHHH
Confidence 0 00000000 00000 00000000000 00 000112345678889999888764
Q ss_pred ---CCccEEeCceEEEEEecCCeEEEEEcCCcEEeccEEEecCCCCch
Q 024233 143 ---GDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLVGADGIWSK 187 (270)
Q Consensus 143 ---~~~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~ad~vI~AdG~~S~ 187 (270)
+.. ++.+++|++++.+++++.+.+.+| +++||.||+|+|.||.
T Consensus 160 ~~~G~~-i~~~~~V~~i~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~ 205 (372)
T 2uzz_A 160 KEAGCA-QLFNCPVTAIRHDDDGVTIETADG-EYQAKKAIVCAGTWVK 205 (372)
T ss_dssp HHTTCE-EECSCCEEEEEECSSSEEEEESSC-EEEEEEEEECCGGGGG
T ss_pred HHCCCE-EEcCCEEEEEEEcCCEEEEEECCC-eEEcCEEEEcCCccHH
Confidence 444 888999999998888888888777 5999999999999984
No 39
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.66 E-value=4.2e-16 Score=140.79 Aligned_cols=65 Identities=25% Similarity=0.269 Sum_probs=50.3
Q ss_pred EEEeHHHHHHHHHHhc---CCccEEeCceEEEEEecCCeEE-EEEcC---C--cEEeccEEEecCCCCch-hhccc
Q 024233 127 RVISRMTLQQILAKAV---GDEIILNESNVIDFKDHGDKVS-VVLEN---G--QCYAGDLLVGADGIWSK-VRKNL 192 (270)
Q Consensus 127 ~~i~~~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~~~-v~~~~---g--~~~~ad~vI~AdG~~S~-vr~~~ 192 (270)
..++...+...|.+.+ |.. ++.+++|+++..+++++. +.+.+ | .+++|+.||+|+|.||. +++.+
T Consensus 165 g~vd~~~l~~~L~~~a~~~G~~-i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~l~~~~ 239 (561)
T 3da1_A 165 YRTDDARLTLEIMKEAVARGAV-ALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREKD 239 (561)
T ss_dssp EECCHHHHHHHHHHHHHHTTCE-EEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGHHHHHHTT
T ss_pred ceEcHHHHHHHHHHHHHHcCCE-EEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcchHHHHHhc
Confidence 4678888988887764 444 899999999999888753 55543 3 47999999999999994 55544
No 40
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.65 E-value=1.7e-14 Score=128.80 Aligned_cols=115 Identities=17% Similarity=0.070 Sum_probs=71.2
Q ss_pred EEEeHHHHHHHHHHhc---CCccEEeCceEEEEEecCCeEEEEEc---CCc--EEeccEEEecCCCCchh-hcc-ccCC-
Q 024233 127 RVISRMTLQQILAKAV---GDEIILNESNVIDFKDHGDKVSVVLE---NGQ--CYAGDLLVGADGIWSKV-RKN-LFGP- 195 (270)
Q Consensus 127 ~~i~~~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~~~v~~~---~g~--~~~ad~vI~AdG~~S~v-r~~-~~~~- 195 (270)
..+++..+...|.+.+ +.. ++.+++|+++..+++.+.+.+. +|+ +++||.||+|+|.||.. ++. +...
T Consensus 144 g~v~~~~l~~~l~~~a~~~Gv~-i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~l~~~~l~~~~ 222 (501)
T 2qcu_A 144 CWVDDARLVLANAQMVVRKGGE-VLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGMHLPS 222 (501)
T ss_dssp EEECHHHHHHHHHHHHHHTTCE-EECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGGGHHHHHHHHTCCCC
T ss_pred CEEcHHHHHHHHHHHHHHcCCE-EEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCChhHHHHHHHhccCCc
Confidence 4578999999998874 444 8889999999988776667663 565 79999999999999974 443 4221
Q ss_pred CCccccceEeEeeeecCCCcccccCceEEEee--CCceEEEEeCCCCeEEEEEE
Q 024233 196 QEAIFSGYTCYTGIADFVPADIESVGYRVFLG--HKQYFVSSDVGAGKMQWYAF 247 (270)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~~~g~~~~~~~ 247 (270)
..+.......+. +.+. + ..... .+++. +++.++++|..+|.+.+..+
T Consensus 223 ~~~i~p~rG~~~-~~~~-~--~~~~~-~~~~~~~dg~~~~~~P~~~g~~~iG~t 271 (501)
T 2qcu_A 223 PYGIRLIKGSHI-VVPR-V--HTQKQ-AYILQNEDKRIVFVIPWMDEFSIIGTT 271 (501)
T ss_dssp SSCBCCEEEEEE-EEEC-S--SSCSC-EEEEECTTSCEEEEEEETTTEEEEECC
T ss_pred ccccccceeEEE-EECC-C--CCCce-EEEeecCCCCEEEEEEcCCCcEEEcCC
Confidence 122221111111 1111 1 11111 23332 45677888998887665543
No 41
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.65 E-value=8.1e-15 Score=125.29 Aligned_cols=66 Identities=11% Similarity=0.223 Sum_probs=53.1
Q ss_pred EEEEeHHHHHHHHHHhc---CCccEEeCceEEEEEecCCe-EEEEEcCC--cEEeccEEEecCCCCch-hhccc
Q 024233 126 TRVISRMTLQQILAKAV---GDEIILNESNVIDFKDHGDK-VSVVLENG--QCYAGDLLVGADGIWSK-VRKNL 192 (270)
Q Consensus 126 ~~~i~~~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~-~~v~~~~g--~~~~ad~vI~AdG~~S~-vr~~~ 192 (270)
...+++..+.+.|.+.+ +.. ++++++|+++..++++ +.+.+.+| .+++||.||+|+|.||. +.+.+
T Consensus 144 ~~~~~~~~~~~~l~~~~~~~Gv~-i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s~~l~~~~ 216 (369)
T 3dme_A 144 TGIVDSHALMLAYQGDAESDGAQ-LVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHAPGLARRI 216 (369)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCE-EECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGHHHHHHTE
T ss_pred CEEECHHHHHHHHHHHHHHCCCE-EECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcchHHHHHHh
Confidence 35678889999888874 444 8889999999988766 88888887 48999999999999995 44444
No 42
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.64 E-value=1.9e-15 Score=134.63 Aligned_cols=136 Identities=24% Similarity=0.224 Sum_probs=100.9
Q ss_pred CCcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcc
Q 024233 17 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 96 (270)
Q Consensus 17 ~~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~ 96 (270)
...+||+|||||++|+++|+.|+++|++|+|||+.+...+. ..+.+.+.+.+.|..+ ++++... .
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~-----~~~~~~~~~~~~l~~~--g~~~~~~--------~ 154 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRH-----NVLHLWPFTIHDLRAL--GAKKFYG--------R 154 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCC-----CEEECCHHHHHHHHTT--THHHHCT--------T
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCC-----CcccCChhHHHHHHHc--CCccccc--------c
Confidence 35689999999999999999999999999999998653211 2355778888888877 5543210 0
Q ss_pred ccccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhc---CCccEEeCceEEEEEec---CCeEEEEE--c
Q 024233 97 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDH---GDKVSVVL--E 168 (270)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~---~~~~i~~~~~v~~i~~~---~~~~~v~~--~ 168 (270)
+. .. + ...+++..+.+.|.+.+ +.. ++++++|+++..+ ++.+.+.+ .
T Consensus 155 ---~~---~~-----------------~-~~~~~~~~l~~~L~~~~~~~gv~-v~~~~~v~~i~~~~~~~~~~~v~~~~~ 209 (497)
T 2bry_A 155 ---FC---TG-----------------T-LDHISIRQLQLLLLKVALLLGVE-IHWGVKFTGLQPPPRKGSGWRAQLQPN 209 (497)
T ss_dssp ---TT---CT-----------------T-CCEEEHHHHHHHHHHHHHHTTCE-EEESCEEEEEECCCSTTCCBEEEEESC
T ss_pred ---cc---cc-----------------c-cccCCHHHHHHHHHHHHHhCCCE-EEeCCEEEEEEEecCCCCEEEEEEEEC
Confidence 00 00 0 12567888988888775 334 8999999999874 34567766 3
Q ss_pred -CC--cEEeccEEEecCCCCchhhccc
Q 024233 169 -NG--QCYAGDLLVGADGIWSKVRKNL 192 (270)
Q Consensus 169 -~g--~~~~ad~vI~AdG~~S~vr~~~ 192 (270)
+| .+++||+||+|||.+|.+|+..
T Consensus 210 ~~g~~~~i~ad~VV~A~G~~S~~r~~~ 236 (497)
T 2bry_A 210 PPAQLASYEFDVLISAAGGKFVPEGFT 236 (497)
T ss_dssp CCHHHHTCCBSEEEECCCTTCCCTTCE
T ss_pred CCCCEEEEEcCEEEECCCCCccccccc
Confidence 55 4799999999999999999765
No 43
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.63 E-value=3.8e-15 Score=131.11 Aligned_cols=174 Identities=20% Similarity=0.249 Sum_probs=97.1
Q ss_pred CCcceEEEEcCCHHHHHHHHHHHhCC-CcEEEEec-cCccccCCCCcccceee--chhHHHHHHHcCcChHHHHHHhccc
Q 024233 17 NKKLRILVAGGGIGGLVFALAAKRKG-FEVLVFEK-DMSAIRGEGQYRGPIQI--QSNALAALEAIDLDVAEEVMRAGCV 92 (270)
Q Consensus 17 ~~~~dV~IIGgG~aGl~~A~~La~~g-~~V~viE~-~~~~~~~~g~~~~~~~l--~~~~~~~l~~~~~~~~~~l~~~~~~ 92 (270)
+.++||+|||||++|+++|+.|+++| .+|+|||+ .......++...+.+.. .......+.......+.++...+..
T Consensus 21 m~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~~~~~~g~S~~~~g~i~~~~~~~~~~~l~~~~~~~~~~l~~~g~~ 100 (448)
T 3axb_A 21 MPRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAGHAPGSGDSGRSMAAFRTFFSSTMNRLVAGSTVRLFEDAQRGGED 100 (448)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESSSSTTCSGGGSSCCEEECCCSSHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccCCCCCCCcccCCCcEecccCCCHHHHHHHHHHHHHHHHHHhcCcc
Confidence 45689999999999999999999999 99999999 54333333333222221 1111111111111334444332111
Q ss_pred cCccccccc---------------cC--CCCcee-----Eee-----------cCC--------cccccCCCCeEEEEeH
Q 024233 93 TGDRINGLV---------------DG--ISGSWY-----IKF-----------DTF--------TPAAEKGLPVTRVISR 131 (270)
Q Consensus 93 ~~~~~~~~~---------------~~--~~~~~~-----~~~-----------~~~--------~~~~~~~~~~~~~i~~ 131 (270)
......+.. .. ..+... ... +.. ......-.+....+++
T Consensus 101 ~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~p~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (448)
T 3axb_A 101 LGLVKSGYLFVYDRERWREVEEPLREAGEEGRDYLIIPPEELERRLGMNTRVSDGEEAEVLGVGDVEGAVLIRSAGFLDA 180 (448)
T ss_dssp CCCBCCCEEEEECHHHHHHHHHHHTTSCCBTTTEEEECHHHHHHHHCCCCCCTTSSHHHHHTCCCCCEEEEESSEEECCH
T ss_pred cccccCCEEEEcCHHHHHHHHHHHHHHHhhCCCccccchhhhhhcccccccCCCHHHHHhccCCCceEEEEeCCCeEEcH
Confidence 100000000 00 000000 000 000 0000011123456788
Q ss_pred HHHHHHHHHhc---CCccEEeCceEEEEEe---------------cCCeE-EEEEcCCcEE--eccEEEecCCCCch-hh
Q 024233 132 MTLQQILAKAV---GDEIILNESNVIDFKD---------------HGDKV-SVVLENGQCY--AGDLLVGADGIWSK-VR 189 (270)
Q Consensus 132 ~~l~~~L~~~~---~~~~i~~~~~v~~i~~---------------~~~~~-~v~~~~g~~~--~ad~vI~AdG~~S~-vr 189 (270)
..+.+.|.+.+ +.. ++.+++|++++. +++++ .+.+.+| ++ +||.||+|+|.||. +.
T Consensus 181 ~~l~~~L~~~~~~~Gv~-i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s~~l~ 258 (448)
T 3axb_A 181 EKVVDYYYRRASGAGVE-FIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWSNRLL 258 (448)
T ss_dssp HHHHHHHHHHHHHTTCE-EEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGHHHHH
T ss_pred HHHHHHHHHHHHhCCCE-EEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCHHHHH
Confidence 89999888875 444 888999999987 55565 5777777 68 99999999999987 55
Q ss_pred ccc
Q 024233 190 KNL 192 (270)
Q Consensus 190 ~~~ 192 (270)
+.+
T Consensus 259 ~~~ 261 (448)
T 3axb_A 259 NPL 261 (448)
T ss_dssp GGG
T ss_pred HHc
Confidence 544
No 44
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.62 E-value=1.6e-15 Score=131.96 Aligned_cols=168 Identities=15% Similarity=0.094 Sum_probs=88.9
Q ss_pred cceEEEEcCCHHHHHHHHHHHhC--CCcEEEEeccCccccCCCCccc-ce-e---echhHHHH-HHHcCcChHHHHHHhc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMSAIRGEGQYRG-PI-Q---IQSNALAA-LEAIDLDVAEEVMRAG 90 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~--g~~V~viE~~~~~~~~~g~~~~-~~-~---l~~~~~~~-l~~~~~~~~~~l~~~~ 90 (270)
.+||+|||||++|+++|+.|+++ |++|+|||+.......++..++ .+ . .......+ ...+ ..+.+ ..+
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~~s~~~~g~~i~~~~~~~~~~~~l~~~~~--~~~~~--~~~ 111 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEEGATILAPGVWTAQDIPAGQEAQAEWTR--EQLLG--ALG 111 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTTSHHHHCCCEECGGGCCTTCHHHHHHHH--HHHHT--GGG
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCcchhccCCcceeecccCCchHHHHHHHHH--HHHHH--HhC
Confidence 48999999999999999999999 9999999998544333322222 12 1 01100011 1111 22222 011
Q ss_pred c--ccCcccccc---ccCCCCceeEeecC-Cc-------------ccccCCCCeEEEEeHHHHHHHHHHhc---CCccEE
Q 024233 91 C--VTGDRINGL---VDGISGSWYIKFDT-FT-------------PAAEKGLPVTRVISRMTLQQILAKAV---GDEIIL 148 (270)
Q Consensus 91 ~--~~~~~~~~~---~~~~~~~~~~~~~~-~~-------------~~~~~~~~~~~~i~~~~l~~~L~~~~---~~~~i~ 148 (270)
. .......+. .............. .. .......+....+++..+.+.|.+.+ +.. ++
T Consensus 112 ~~~~~~~~~~g~l~~~~~~~~~g~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~v~~~~l~~~L~~~~~~~Gv~-i~ 190 (405)
T 3c4n_A 112 SGKTLEVEDRPLLHLLPAGEGSGLTPTLDALADFPEALALLDPARLPVARVDPRALTYRPGSLALLAAQQAIGQGAG-LL 190 (405)
T ss_dssp SSCCCCEEECCEEEEESSCCSSSCEEHHHHTTTCHHHHTTSCTTTSCEEEEETTCEEECHHHHHHHHHHHHHTTTCE-EE
T ss_pred CCCCCcEEeeCeEEehhhHhHCCCCCHHHHHHhCCCccccccCCcceEEEEcCCCEEEcHHHHHHHHHHHHHHCCCE-EE
Confidence 0 000000000 00000000000000 00 00000112235678899999998875 333 88
Q ss_pred eCceEE---------EEEecCCeEEEEEcCCcEEeccEEEecCCCCc-hhhc-cc
Q 024233 149 NESNVI---------DFKDHGDKVSVVLENGQCYAGDLLVGADGIWS-KVRK-NL 192 (270)
Q Consensus 149 ~~~~v~---------~i~~~~~~~~v~~~~g~~~~ad~vI~AdG~~S-~vr~-~~ 192 (270)
++++|+ ++..+++++.+.+.+| +++||.||+|+|.+| .+++ .+
T Consensus 191 ~~~~v~~~~g~~~~~~i~~~~~~v~v~~~~g-~i~a~~VV~A~G~~s~~l~~~~~ 244 (405)
T 3c4n_A 191 LNTRAELVPGGVRLHRLTVTNTHQIVVHETR-QIRAGVIIVAAGAAGPALVEQGL 244 (405)
T ss_dssp CSCEEEEETTEEEEECBCC-------CBCCE-EEEEEEEEECCGGGHHHHHHHHH
T ss_pred cCCEEEeccccccccceEeeCCeEEEEECCc-EEECCEEEECCCccHHHHHHHhc
Confidence 899999 8887777776666666 799999999999999 5766 54
No 45
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.60 E-value=1e-14 Score=127.83 Aligned_cols=208 Identities=15% Similarity=0.098 Sum_probs=107.9
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCccc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 97 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~ 97 (270)
+++||+||||||+|+++|+.|+++|++|+|||+.+.+....|...+...+.......++.++.+.|....... ..+
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~----~~~ 96 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRKPDEYSGLRLLNTVAHNAVTVQREVALDVNEWPSEEFGY----FGH 96 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCCGGGSTTSCCCCCCCBCHHHHHHHHHTTCCCSCHHHHCE----EEE
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCChHhhcccccccchhccchhhhhhhhcChhhhhhhcccc----cce
Confidence 4579999999999999999999999999999998643333333222334556677777777544443321110 000
Q ss_pred cccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhc---CCccEEeCc-eEEEEEecCCeEEEEEcCCcEE
Q 024233 98 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNES-NVIDFKDHGDKVSVVLENGQCY 173 (270)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~---~~~~i~~~~-~v~~i~~~~~~~~v~~~~g~~~ 173 (270)
. +...... ...+.. .. ......+++..+...|.+.+ +.. ++... .+.++.. ...
T Consensus 97 ~-~~~~~~~--~~~~~~-----~~-~~~~~~v~~~~l~~~L~~~~~~~Gv~-v~~~~v~~~~l~~------------~~~ 154 (430)
T 3ihm_A 97 Y-YYVGGPQ--PMRFYG-----DL-KAPSRAVDYRLYQPMLMRALEARGGK-FCYDAVSAEDLEG------------LSE 154 (430)
T ss_dssp E-EEECSSS--CEEEEE-----EE-EEEEBEECHHHHHHHHHHHHHHTTCE-EEECCCCGGGHHH------------HHT
T ss_pred e-EEECCCC--ccccch-----hc-CCcceeecHHHHHHHHHHHHHHcCCE-EEEEecchhhhhh------------hcc
Confidence 0 0100010 111110 01 11246789999999888875 333 33311 1111110 012
Q ss_pred eccEEEecCCCCchhhccccCCCC--ccccceEeEeeeecC-CCcccccCceEEEeeCCceEEEEeC--CCCeEEEEEEE
Q 024233 174 AGDLLVGADGIWSKVRKNLFGPQE--AIFSGYTCYTGIADF-VPADIESVGYRVFLGHKQYFVSSDV--GAGKMQWYAFN 248 (270)
Q Consensus 174 ~ad~vI~AdG~~S~vr~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~--~~g~~~~~~~~ 248 (270)
.+|+||+|||.+|.++........ ..+.+.....++... .+..+....+ .++...+.++.+|. .+|...+++..
T Consensus 155 ~ad~VV~AdG~~S~~~~~~~~~~~~~~~~p~r~~~~~~~~g~~~~~~~~~~~-~~~~~~G~~~~~p~~~~~g~~~~~~~~ 233 (430)
T 3ihm_A 155 QYDLLVVCTGKYALGKVFEKQSENSPFEKPQRALCVGLFKGIKEAPIRAVTM-SFSPGHGELIEIPTLSFNGMSTALVLE 233 (430)
T ss_dssp TSSEEEECCCCTTGGGGSCBCGGGCCCSSCSSEEEEEEEESBCCCSSCCEEE-EEETTTEEEEEEEEEETTEEEEEEEEE
T ss_pred cCCEEEECCCCcchHHhccCCCCCCcccCCCeeEEEEEEccCCCCCcCeeee-eecCCCcceEEecccCCCcceEEEEEE
Confidence 689999999999988754322111 111222222222222 1212212122 22334556667775 34666655555
Q ss_pred eCCC
Q 024233 249 KEPA 252 (270)
Q Consensus 249 ~~~~ 252 (270)
..+.
T Consensus 234 ~~~~ 237 (430)
T 3ihm_A 234 NHIG 237 (430)
T ss_dssp ECTT
T ss_pred ecCC
Confidence 5443
No 46
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.60 E-value=6.7e-15 Score=128.15 Aligned_cols=144 Identities=19% Similarity=0.198 Sum_probs=88.4
Q ss_pred CCcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccc-eee-----c---------hhHHHHHHHcCcC
Q 024233 17 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGP-IQI-----Q---------SNALAALEAIDLD 81 (270)
Q Consensus 17 ~~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~-~~l-----~---------~~~~~~l~~~~~~ 81 (270)
+..+||+|||||++|+++|+.|+++|++|+|||+.+.........+++ ..+ . ......+.++...
T Consensus 25 ~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~ 104 (417)
T 3v76_A 25 AEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQ 104 (417)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHH
Confidence 346899999999999999999999999999999987532211000001 000 0 0112233333110
Q ss_pred -hHHHHHHhccccCccccccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhc---CCccEEeCceEEEEE
Q 024233 82 -VAEEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFK 157 (270)
Q Consensus 82 -~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~---~~~~i~~~~~v~~i~ 157 (270)
..+.+.+.+.. +..... +..+ ....+..+.+.|.+.+ +.. ++++++|+++.
T Consensus 105 ~~~~~~~~~Gi~-------~~~~~~----------------g~~~-~~~~~~~l~~~L~~~l~~~Gv~-i~~~~~V~~i~ 159 (417)
T 3v76_A 105 DFVALVERHGIG-------WHEKTL----------------GQLF-CDHSAKDIIRMLMAEMKEAGVQ-LRLETSIGEVE 159 (417)
T ss_dssp HHHHHHHHTTCC-------EEECST----------------TEEE-ESSCHHHHHHHHHHHHHHHTCE-EECSCCEEEEE
T ss_pred HHHHHHHHcCCC-------cEEeeC----------------CEEe-eCCCHHHHHHHHHHHHHHCCCE-EEECCEEEEEE
Confidence 11111111110 000000 1111 1235677888887765 444 89999999999
Q ss_pred ecCCeEEEEEcCCcEEeccEEEecCCCCc
Q 024233 158 DHGDKVSVVLENGQCYAGDLLVGADGIWS 186 (270)
Q Consensus 158 ~~~~~~~v~~~~g~~~~ad~vI~AdG~~S 186 (270)
.+++++.+.+.+| +++||.||+|+|.+|
T Consensus 160 ~~~~~~~V~~~~g-~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 160 RTASGFRVTTSAG-TVDAASLVVASGGKS 187 (417)
T ss_dssp EETTEEEEEETTE-EEEESEEEECCCCSS
T ss_pred EeCCEEEEEECCc-EEEeeEEEECCCCcc
Confidence 9888899998888 899999999999998
No 47
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.59 E-value=1.8e-15 Score=133.24 Aligned_cols=154 Identities=19% Similarity=0.212 Sum_probs=87.1
Q ss_pred CCcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccce-eech--hHHHHHHHcCcC---hHHHHHHhc
Q 024233 17 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPI-QIQS--NALAALEAIDLD---VAEEVMRAG 90 (270)
Q Consensus 17 ~~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~-~l~~--~~~~~l~~~~~~---~~~~l~~~~ 90 (270)
.+++||+|||||++|+++|+.|+++|.+|+|||+.+...+.....+++. .+.. ....++..++.. +...+....
T Consensus 24 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (447)
T 2i0z_A 24 AMHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFN 103 (447)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSC
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcC
Confidence 3568999999999999999999999999999999864322111011111 1110 011222222100 001010000
Q ss_pred cccCccccccccCCCCceeEeecCCcccccCCCCeEEEE----eHHHHHHHHHHhc---CCccEEeCceEEEEEecCCe-
Q 024233 91 CVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVI----SRMTLQQILAKAV---GDEIILNESNVIDFKDHGDK- 162 (270)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i----~~~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~- 162 (270)
. . ....+... .+..... . ..+..+ ....+.+.|.+.+ +.. ++++++|+++..++++
T Consensus 104 ~--~-~~~~~~~~-~G~~~~~-~----------~~g~~~p~~~~~~~l~~~L~~~~~~~GV~-i~~~~~V~~i~~~~~~v 167 (447)
T 2i0z_A 104 N--E-DIITFFEN-LGVKLKE-E----------DHGRMFPVSNKAQSVVDALLTRLKDLGVK-IRTNTPVETIEYENGQT 167 (447)
T ss_dssp H--H-HHHHHHHH-TTCCEEE-C----------GGGEEEETTCCHHHHHHHHHHHHHHTTCE-EECSCCEEEEEEETTEE
T ss_pred H--H-HHHHHHHh-cCCceEE-e----------eCCEEECCCCCHHHHHHHHHHHHHHCCCE-EEeCcEEEEEEecCCcE
Confidence 0 0 00000000 0000000 0 001122 3567777777764 444 8999999999987777
Q ss_pred EEEEEcCCcEEeccEEEecCCCCc
Q 024233 163 VSVVLENGQCYAGDLLVGADGIWS 186 (270)
Q Consensus 163 ~~v~~~~g~~~~ad~vI~AdG~~S 186 (270)
+.|.+.+|++++||.||+|+|.+|
T Consensus 168 ~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 168 KAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp EEEEETTCCEEECSCEEECCCCSS
T ss_pred EEEEECCCCEEECCEEEECCCCCc
Confidence 678888887899999999999999
No 48
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.54 E-value=5.1e-14 Score=127.46 Aligned_cols=167 Identities=19% Similarity=0.238 Sum_probs=92.3
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcC-----hHHHHHHhccc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLD-----VAEEVMRAGCV 92 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~-----~~~~l~~~~~~ 92 (270)
..+||+|||||++|+++|+.|+++|.+|+||||.+.....+...++++..... ...+.++.. ....+.+.+..
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~--~~~~~~g~~ds~~~~~~~~~~~~~~ 197 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGT--KQQTAHGVEDKVEWFIEDAMKGGRQ 197 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSC--HHHHHTTCCCCHHHHHHHHHHHTTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCC--HHHHHhCCCCCHHHHHHHHHHhcCC
Confidence 45799999999999999999999999999999997654433333334432211 111221100 00011000000
Q ss_pred c-------------CccccccccCCCCceeEeecCCcccccCCCCeEE-----EEeHHHHHHHHHHhc---CCccEEeCc
Q 024233 93 T-------------GDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTR-----VISRMTLQQILAKAV---GDEIILNES 151 (270)
Q Consensus 93 ~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~i~~~~l~~~L~~~~---~~~~i~~~~ 151 (270)
. ...+. +.... +-.+...... .....+..+ .+....+.+.|.+.+ +.. +++++
T Consensus 198 ~~~~~~~~~~~~~~~~~i~-~l~~~-Gv~~~~~~~~---~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~-i~~~~ 271 (566)
T 1qo8_A 198 QNDIKLVTILAEQSADGVQ-WLESL-GANLDDLKRS---GGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGID-TRLNS 271 (566)
T ss_dssp CSCHHHHHHHHHHHHHHHH-HHHHT-TCCCCEEECC---TTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCC-EECSE
T ss_pred CCCHHHHHHHHhccHHHHH-HHHhc-CCcccccccc---CCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCE-EEeCC
Confidence 0 00000 00000 0000000000 000111111 134677888887764 444 99999
Q ss_pred eEEEEEecC-CeEE-EEE--cCCc--EEeccEEEecCCCCchhhccc
Q 024233 152 NVIDFKDHG-DKVS-VVL--ENGQ--CYAGDLLVGADGIWSKVRKNL 192 (270)
Q Consensus 152 ~v~~i~~~~-~~~~-v~~--~~g~--~~~ad~vI~AdG~~S~vr~~~ 192 (270)
+|+++..++ +++. +.. .+|+ +++||.||+|+|.+|..++.+
T Consensus 272 ~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~~~~~~ 318 (566)
T 1qo8_A 272 RVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGMNKEMI 318 (566)
T ss_dssp EEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTTCHHHH
T ss_pred EEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcccCHHHH
Confidence 999999877 6543 333 3675 689999999999999876544
No 49
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.52 E-value=5.2e-14 Score=126.07 Aligned_cols=57 Identities=23% Similarity=0.286 Sum_probs=47.0
Q ss_pred eHHHHHHHHHHhc---CCccEEeCceEEEEEecCCeEE-EEEcCCcEEeccEEEecCCCCch
Q 024233 130 SRMTLQQILAKAV---GDEIILNESNVIDFKDHGDKVS-VVLENGQCYAGDLLVGADGIWSK 187 (270)
Q Consensus 130 ~~~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~~~-v~~~~g~~~~ad~vI~AdG~~S~ 187 (270)
....+.+.|.+.+ +.. ++++++|+++..+++++. +.+.+|++++||.||+|+|.+|.
T Consensus 218 ~~~~l~~~L~~~l~~~Gv~-I~~~t~V~~I~~~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 218 KLVTMIEKMRATIIELGGE-IRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSAR 278 (549)
T ss_dssp HHHHHHHHHHHHHHHTTCE-EESSCCEEEEEESSSBEEEEEETTSCEEECSCEEECCCTTCH
T ss_pred hHHHHHHHHHHHHHhcCCE-EEeCCEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChh
Confidence 4567777776654 444 999999999998877655 88889989999999999999995
No 50
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.51 E-value=6e-13 Score=125.60 Aligned_cols=73 Identities=21% Similarity=0.379 Sum_probs=55.6
Q ss_pred EEEEeHHHHHHHHHHhc---CCccEEeCceEEEEEecCCeEE-EEEcCCcEEeccEEEecCCCCchhhccccCCCCccc
Q 024233 126 TRVISRMTLQQILAKAV---GDEIILNESNVIDFKDHGDKVS-VVLENGQCYAGDLLVGADGIWSKVRKNLFGPQEAIF 200 (270)
Q Consensus 126 ~~~i~~~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~~~-v~~~~g~~~~ad~vI~AdG~~S~vr~~~~~~~~~~~ 200 (270)
...+++..+.+.|.+.+ +.. ++.+++|++|..+++++. |.+.+| +++||.||+|+|.||.....+.+...|..
T Consensus 145 ~g~v~p~~l~~~L~~~a~~~Gv~-i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s~~l~~~~g~~~pl~ 221 (830)
T 1pj5_A 145 DGLASAARAVQLLIKRTESAGVT-YRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWGAKIGAMIGMAVPLL 221 (830)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCE-EECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGHHHHHHTTTCCCCCE
T ss_pred CceEcHHHHHHHHHHHHHHcCCE-EECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccchHHHHHHhCCCccce
Confidence 35678999999998875 444 888999999998888764 667666 79999999999999976544444444433
No 51
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.51 E-value=3.4e-13 Score=122.00 Aligned_cols=159 Identities=18% Similarity=0.270 Sum_probs=94.6
Q ss_pred CCCCCcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCccccee-ec-hhHHHHHHHcCcChHHHHHHhcc
Q 024233 14 DSENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQ-IQ-SNALAALEAIDLDVAEEVMRAGC 91 (270)
Q Consensus 14 ~~~~~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~-l~-~~~~~~l~~~~~~~~~~l~~~~~ 91 (270)
|..+..+||+|||||++|+++|+.|++.|.+|+|||+.+......+ +...+. +. ....+.++.++..+.......+.
T Consensus 23 ~~~~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~-Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi 101 (651)
T 3ces_A 23 MFYPDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMS-CNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGI 101 (651)
T ss_dssp EECSSCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCS-SSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEE
T ss_pred CCCCCcCCEEEECChHHHHHHHHHHHhCCCCEEEEeeccccccccc-ccccccchhhHHHHHHHHHhccHHHHHhhhccc
Confidence 4333568999999999999999999999999999999842221111 100111 11 11223334443111111111111
Q ss_pred ccCccccccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCC--c-cEEeCceEEEEEecCCeE-EEEE
Q 024233 92 VTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGD--E-IILNESNVIDFKDHGDKV-SVVL 167 (270)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~--~-~i~~~~~v~~i~~~~~~~-~v~~ 167 (270)
.. . ......+ .....+ ...+++..+.+.|.+.+.. . .+ ++++|+++..+++.+ .|.+
T Consensus 102 ~f----~-~l~~~kg------------pav~~~-r~~~Dr~~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~g~V~GV~t 162 (651)
T 3ces_A 102 QF----R-ILNASKG------------PAVRAT-RAQADRVLYRQAVRTALENQPNLMI-FQQAVEDLIVENDRVVGAVT 162 (651)
T ss_dssp EE----E-EESTTSC------------GGGCEE-EEEECHHHHHHHHHHHHHTCTTEEE-EECCEEEEEESSSBEEEEEE
T ss_pred ch----h-hhhcccC------------cccccc-hhhCCHHHHHHHHHHHHHhCCCCEE-EEEEEEEEEecCCEEEEEEE
Confidence 00 0 0000000 000111 2467888888888877532 2 25 567999998877766 5778
Q ss_pred cCCcEEeccEEEecCCCCchhhccc
Q 024233 168 ENGQCYAGDLLVGADGIWSKVRKNL 192 (270)
Q Consensus 168 ~~g~~~~ad~vI~AdG~~S~vr~~~ 192 (270)
.+|.++.||.||+|+|.+|..+...
T Consensus 163 ~dG~~I~Ad~VVLATGt~s~~~~i~ 187 (651)
T 3ces_A 163 QMGLKFRAKAVVLTVGTFLDGKIHI 187 (651)
T ss_dssp TTSEEEEEEEEEECCSTTTCCEEEC
T ss_pred CCCCEEECCEEEEcCCCCccCcccc
Confidence 8888899999999999999876643
No 52
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.49 E-value=4.3e-13 Score=107.70 Aligned_cols=125 Identities=18% Similarity=0.223 Sum_probs=84.6
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcC-cChHHHHHHhccccCcc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAID-LDVAEEVMRAGCVTGDR 96 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~-~~~~~~l~~~~~~~~~~ 96 (270)
+.+||+|||||++|+.+|+.|+++|.+|+|||+...... ....+.. ..+. ..+..++.
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G--------~~~~~~~----~~~~~~~~~~~~~--------- 60 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVM--------MPFLPPK----PPFPPGSLLERAY--------- 60 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTT--------CCSSCCC----SCCCTTCHHHHHC---------
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCC--------cccCccc----cccchhhHHhhhc---------
Confidence 358999999999999999999999999999999843211 0011100 0000 01111110
Q ss_pred ccccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCC--c-cEEeCceEEEEEecCCeE-EEEEcCCcE
Q 024233 97 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGD--E-IILNESNVIDFKDHGDKV-SVVLENGQC 172 (270)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~--~-~i~~~~~v~~i~~~~~~~-~v~~~~g~~ 172 (270)
+ ..+ + ++..+.+.|.+.+.. . .++ +++|+++..+++++ .+.+.+|++
T Consensus 61 ----------------d------~~g-~-----~~~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~~~v~~v~~~~g~~ 111 (232)
T 2cul_A 61 ----------------D------PKD-E-----RVWAFHARAKYLLEGLRPLHLF-QATATGLLLEGNRVVGVRTWEGPP 111 (232)
T ss_dssp ----------------C------TTC-C-----CHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCC
T ss_pred ----------------c------CCC-C-----CHHHHHHHHHHHHHcCCCcEEE-EeEEEEEEEeCCEEEEEEECCCCE
Confidence 0 001 1 577888888776532 2 255 57999999887775 577888888
Q ss_pred EeccEEEecCCCCchhhccc
Q 024233 173 YAGDLLVGADGIWSKVRKNL 192 (270)
Q Consensus 173 ~~ad~vI~AdG~~S~vr~~~ 192 (270)
++||.||+|+|.+|..+..+
T Consensus 112 i~a~~VV~A~G~~s~~~~~~ 131 (232)
T 2cul_A 112 ARGEKVVLAVGSFLGARLFL 131 (232)
T ss_dssp EECSEEEECCTTCSSCEEEE
T ss_pred EECCEEEECCCCChhhceec
Confidence 99999999999999888654
No 53
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.49 E-value=4.2e-13 Score=121.62 Aligned_cols=162 Identities=13% Similarity=0.154 Sum_probs=89.3
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCc-----------------
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDL----------------- 80 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~----------------- 80 (270)
..+||+|||||++|+++|+.|+++|.+|+||||.+.....+...++++..... ...++++.
T Consensus 125 ~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~--~~~~~~g~~ds~~~~~~~~~~~g~~ 202 (571)
T 1y0p_A 125 DTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWT--DQQKAKKITDSPELMFEDTMKGGQN 202 (571)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSC--HHHHHTTCCCCHHHHHHHHHHHTTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCC--HHHHHhCCCCCHHHHHHHHHHhcCC
Confidence 35899999999999999999999999999999997544333333334432221 11222210
Q ss_pred ----ChHHHHHHhccccCccccccccCCCCceeEeecCCcccccCCCCeEEE-----EeHHHHHHHHHHhc---CCccEE
Q 024233 81 ----DVAEEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRV-----ISRMTLQQILAKAV---GDEIIL 148 (270)
Q Consensus 81 ----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----i~~~~l~~~L~~~~---~~~~i~ 148 (270)
.+...+.+.... .+. +... .+..+...... .....+..+. .....+.+.|.+.+ +.. ++
T Consensus 203 ~~~~~~~~~~~~~~~~---~~~-~l~~-~Gv~~~~~~~~---~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~-i~ 273 (571)
T 1y0p_A 203 INDPALVKVLSSHSKD---SVD-WMTA-MGADLTDVGMM---GGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNID-LR 273 (571)
T ss_dssp CSCHHHHHHHHHHHHH---HHH-HHHH-TTCCCCEEECC---TTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCE-EE
T ss_pred CCCHHHHHHHHHccHH---HHH-HHHh-cCCCCccCccc---CCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCE-EE
Confidence 000000000000 000 0000 00000000000 0000111111 34567788887764 444 99
Q ss_pred eCceEEEEEecC-CeEE-EEE--cCCc--EEeccEEEecCCCCchhhc
Q 024233 149 NESNVIDFKDHG-DKVS-VVL--ENGQ--CYAGDLLVGADGIWSKVRK 190 (270)
Q Consensus 149 ~~~~v~~i~~~~-~~~~-v~~--~~g~--~~~ad~vI~AdG~~S~vr~ 190 (270)
++++|+++..++ +.+. +.. .+|+ ++.||.||+|+|.+|..+.
T Consensus 274 ~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~n~~ 321 (571)
T 1y0p_A 274 MNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFAKNNE 321 (571)
T ss_dssp SSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCTTCHH
T ss_pred eCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCcccCHH
Confidence 999999999876 5543 333 3665 6899999999999997554
No 54
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.49 E-value=7.7e-13 Score=109.47 Aligned_cols=138 Identities=17% Similarity=0.211 Sum_probs=86.0
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhC-CCcEEEEeccCccccCCCCccc---ceeechhHHHHHHHcCcChHHHHHHhcccc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRK-GFEVLVFEKDMSAIRGEGQYRG---PIQIQSNALAALEAIDLDVAEEVMRAGCVT 93 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~-g~~V~viE~~~~~~~~~g~~~~---~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~ 93 (270)
..+||+|||||++|+++|+.|+++ |.+|+|||+.+.........++ .+.+.....+.++++ +...
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~-----------G~~~ 106 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEI-----------GVAY 106 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHH-----------TCCC
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHc-----------CCCc
Confidence 457999999999999999999997 9999999998654322211111 111222222222222 1100
Q ss_pred CccccccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhc-C-Cc-cEEeCceEEEEEecCCeEE-EEEc-
Q 024233 94 GDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV-G-DE-IILNESNVIDFKDHGDKVS-VVLE- 168 (270)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~-~-~~-~i~~~~~v~~i~~~~~~~~-v~~~- 168 (270)
.. .+ .+....++..+.+.|.+++ . .. .++.+++|+++..+++.+. +.+.
T Consensus 107 -------~~--~~-----------------~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~ 160 (284)
T 1rp0_A 107 -------DE--QD-----------------TYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNW 160 (284)
T ss_dssp -------EE--CS-----------------SEEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEE
T ss_pred -------cc--CC-----------------CEEEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEec
Confidence 00 00 0001225677777777664 2 12 3889999999998777552 3332
Q ss_pred --------CC-----cEEeccEEEecCCCCchhhccc
Q 024233 169 --------NG-----QCYAGDLLVGADGIWSKVRKNL 192 (270)
Q Consensus 169 --------~g-----~~~~ad~vI~AdG~~S~vr~~~ 192 (270)
++ .+++||.||+|+|.+|.++...
T Consensus 161 ~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~ 197 (284)
T 1rp0_A 161 ALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATG 197 (284)
T ss_dssp HHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTHH
T ss_pred cccccccCccccCceEEEECCEEEECCCCchHHHHHH
Confidence 22 5799999999999999887643
No 55
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.47 E-value=1.9e-13 Score=118.48 Aligned_cols=143 Identities=19% Similarity=0.169 Sum_probs=84.3
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCccccee------echh---------HHHHHHHcCc-C
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQ------IQSN---------ALAALEAIDL-D 81 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~------l~~~---------~~~~l~~~~~-~ 81 (270)
.++||+|||||++|+++|+.|+++|.+|+|||+.+.........+++.+ ..+. ....+..+.. .
T Consensus 3 ~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (401)
T 2gqf_A 3 QYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWD 82 (401)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHH
Confidence 3589999999999999999999999999999998643111000000000 0000 0112222210 0
Q ss_pred hHHHHHHhccccCccccccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhc---CCccEEeCceEEEEEe
Q 024233 82 VAEEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKD 158 (270)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~---~~~~i~~~~~v~~i~~ 158 (270)
..+.+.+.+... .....+.. +|. . .+..+.+.|.+.+ +.. ++++++|+++..
T Consensus 83 ~~~~~~~~Gi~~-------~~~~~g~~--------------~p~--~-~~~~l~~~L~~~~~~~Gv~-i~~~~~v~~i~~ 137 (401)
T 2gqf_A 83 FISLVAEQGITY-------HEKELGQL--------------FCD--E-GAEQIVEMLKSECDKYGAK-ILLRSEVSQVER 137 (401)
T ss_dssp HHHHHHHTTCCE-------EECSTTEE--------------EET--T-CTHHHHHHHHHHHHHHTCE-EECSCCEEEEEE
T ss_pred HHHHHHhCCCce-------EECcCCEE--------------ccC--C-CHHHHHHHHHHHHHHCCCE-EEeCCEEEEEEc
Confidence 011111111100 00000000 000 1 5677777777664 444 899999999987
Q ss_pred c----CCeEEEEEcCCcEEeccEEEecCCCCc
Q 024233 159 H----GDKVSVVLENGQCYAGDLLVGADGIWS 186 (270)
Q Consensus 159 ~----~~~~~v~~~~g~~~~ad~vI~AdG~~S 186 (270)
+ ++++.+.+.++ +++||.||+|+|.+|
T Consensus 138 ~~~g~~~~~~v~~~~g-~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 138 IQNDEKVRFVLQVNST-QWQCKNLIVATGGLS 168 (401)
T ss_dssp CCSCSSCCEEEEETTE-EEEESEEEECCCCSS
T ss_pred ccCcCCCeEEEEECCC-EEECCEEEECCCCcc
Confidence 6 56788887766 799999999999999
No 56
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.47 E-value=1.6e-13 Score=116.62 Aligned_cols=128 Identities=16% Similarity=0.274 Sum_probs=84.1
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCccc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 97 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~ 97 (270)
.++||+|||||++|+++|+.|+++|++|+|||+.+... +.. . + .+. . .........
T Consensus 2 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~g-g~~-------~--~------~~~-~-------~~~~~~~~~ 57 (357)
T 4a9w_A 2 DSVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPG-GAW-------Q--H------AWH-S-------LHLFSPAGW 57 (357)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSS-GGG-------G--G------SCT-T-------CBCSSCGGG
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCC-Ccc-------c--C------CCC-C-------cEecCchhh
Confidence 35899999999999999999999999999999986321 100 0 0 000 0 000000000
Q ss_pred cccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhc---CCccEEeCceEEEEEecCCeEE-EEEcCCcEE
Q 024233 98 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDHGDKVS-VVLENGQCY 173 (270)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~~~-v~~~~g~~~ 173 (270)
. .+...... ... ....++..+.+.|.+.+ +.. ++++++|+++..+++.+. +.+.++ ++
T Consensus 58 ~------------~~~~~~~~--~~~--~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~v~~i~~~~~~~~~v~~~~g-~~ 119 (357)
T 4a9w_A 58 S------------SIPGWPMP--ASQ--GPYPARAEVLAYLAQYEQKYALP-VLRPIRVQRVSHFGERLRVVARDGR-QW 119 (357)
T ss_dssp S------------CCSSSCCC--CCS--SSSCBHHHHHHHHHHHHHHTTCC-EECSCCEEEEEEETTEEEEEETTSC-EE
T ss_pred h------------hCCCCCCC--CCc--cCCCCHHHHHHHHHHHHHHcCCE-EEcCCEEEEEEECCCcEEEEEeCCC-EE
Confidence 0 00000000 000 12345778877776653 444 889999999999999998 888887 89
Q ss_pred eccEEEecCCCCch
Q 024233 174 AGDLLVGADGIWSK 187 (270)
Q Consensus 174 ~ad~vI~AdG~~S~ 187 (270)
++|.||+|+|.+|.
T Consensus 120 ~~d~vV~AtG~~~~ 133 (357)
T 4a9w_A 120 LARAVISATGTWGE 133 (357)
T ss_dssp EEEEEEECCCSGGG
T ss_pred EeCEEEECCCCCCC
Confidence 99999999999874
No 57
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.47 E-value=2.8e-12 Score=116.02 Aligned_cols=61 Identities=16% Similarity=0.251 Sum_probs=45.3
Q ss_pred EEeHHHHHHHHHHhc---CCccEEeCceEEEEEecCCeEE-EEEc---CCc--EEeccEEEecCCCCchhh
Q 024233 128 VISRMTLQQILAKAV---GDEIILNESNVIDFKDHGDKVS-VVLE---NGQ--CYAGDLLVGADGIWSKVR 189 (270)
Q Consensus 128 ~i~~~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~~~-v~~~---~g~--~~~ad~vI~AdG~~S~vr 189 (270)
.++...+...|.+.+ |.. ++.+++|+++..+++++. |.+. +++ +++||.||+|+|.||.-.
T Consensus 184 ~v~~~~l~~~l~~~a~~~Ga~-i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~~l 253 (571)
T 2rgh_A 184 RNNDARLVIDNIKKAAEDGAY-LVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVDKV 253 (571)
T ss_dssp ECCHHHHHHHHHHHHHHTTCE-EESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHHHH
T ss_pred eEchHHHHHHHHHHHHHcCCe-EEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhHHHH
Confidence 457777877776653 444 888999999998877643 5542 343 799999999999999543
No 58
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.46 E-value=2.7e-13 Score=119.26 Aligned_cols=61 Identities=16% Similarity=0.131 Sum_probs=49.2
Q ss_pred EEeHHHHHHHHHHhcCC--ccEEeCceEEEEEecCCeEEEEEcC---Cc---EEeccEEEecCCCCchh
Q 024233 128 VISRMTLQQILAKAVGD--EIILNESNVIDFKDHGDKVSVVLEN---GQ---CYAGDLLVGADGIWSKV 188 (270)
Q Consensus 128 ~i~~~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~~~v~~~~---g~---~~~ad~vI~AdG~~S~v 188 (270)
..++..+.+.|.+.+.. ..++++++|+++..++++|.|++.+ |+ ++.+|.||+|+|.+|.-
T Consensus 111 ~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~~~~~d~VVvAtG~~s~p 179 (447)
T 2gv8_A 111 FPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPISKDIFDAVSICNGHYEVP 179 (447)
T ss_dssp SCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTCCEEEEEESEEEECCCSSSSB
T ss_pred CCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeEEEEeCEEEECCCCCCCC
Confidence 45788888888776532 2488899999999888888888775 66 79999999999998753
No 59
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.45 E-value=9e-13 Score=101.48 Aligned_cols=112 Identities=28% Similarity=0.332 Sum_probs=81.8
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCccccc
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRING 99 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~ 99 (270)
+||+|||||++|+.+|..|++.|.+|+|+|+.+....... .+..
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~------------------------------------~~~~ 45 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVS------------------------------------RVPN 45 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCS------------------------------------CCCC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCch------------------------------------hhhc
Confidence 6999999999999999999999999999999852110000 0000
Q ss_pred cccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhc---CCccEEeCceEEEEEecCCeEEEEEcCCcEEecc
Q 024233 100 LVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDHGDKVSVVLENGQCYAGD 176 (270)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~ad 176 (270)
+ .+.|. .+...++.+.+.+.+ +.. ++.+ +|+++..+++++.+.+++| ++++|
T Consensus 46 ~--------------------~~~~~--~~~~~~~~~~l~~~~~~~gv~-v~~~-~v~~i~~~~~~~~v~~~~g-~i~ad 100 (180)
T 2ywl_A 46 Y--------------------PGLLD--EPSGEELLRRLEAHARRYGAE-VRPG-VVKGVRDMGGVFEVETEEG-VEKAE 100 (180)
T ss_dssp S--------------------TTCTT--CCCHHHHHHHHHHHHHHTTCE-EEEC-CCCEEEECSSSEEEECSSC-EEEEE
T ss_pred c--------------------CCCcC--CCCHHHHHHHHHHHHHHcCCE-EEeC-EEEEEEEcCCEEEEEECCC-EEEEC
Confidence 0 00000 134556666666654 444 7888 9999998888888888888 89999
Q ss_pred EEEecCCCCchhhccc
Q 024233 177 LLVGADGIWSKVRKNL 192 (270)
Q Consensus 177 ~vI~AdG~~S~vr~~~ 192 (270)
.||.|+|.++.+++.+
T Consensus 101 ~vI~A~G~~~~~~~~~ 116 (180)
T 2ywl_A 101 RLLLCTHKDPTLPSLL 116 (180)
T ss_dssp EEEECCTTCCHHHHHH
T ss_pred EEEECCCCCCCccccC
Confidence 9999999999886665
No 60
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.45 E-value=1.8e-12 Score=116.87 Aligned_cols=153 Identities=19% Similarity=0.286 Sum_probs=92.6
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCccccee-e-chhHHHHHHHcCcChHHHHH-HhccccC
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQ-I-QSNALAALEAIDLDVAEEVM-RAGCVTG 94 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~-l-~~~~~~~l~~~~~~~~~~l~-~~~~~~~ 94 (270)
..+||+|||||++|+++|+.|++.|.+|+|||+.+...+..+ +...+. + .....+.++.++ +.+.... ..+....
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~-Cnps~GGia~g~lv~eldalg-g~~~~~~d~~gi~f~ 103 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMS-CNPAIGGIAKGIVVREIDALG-GEMGKAIDQTGIQFK 103 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCC-SCSEEECTTHHHHHHHHHHHT-CSHHHHHHHHEEEEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcC-ccccccccchHHHHHHHHHhh-hHHHHHhhhccccee
Confidence 358999999999999999999999999999999842211111 000111 1 111223334443 2222211 1111000
Q ss_pred ccccccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCC--c-cEEeCceEEEEEecCCeEE-EEEcCC
Q 024233 95 DRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGD--E-IILNESNVIDFKDHGDKVS-VVLENG 170 (270)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~--~-~i~~~~~v~~i~~~~~~~~-v~~~~g 170 (270)
......+ .....+ ...+++..+.+.|.+.+.. . .+ ++++|+++..+++.+. |.+.+|
T Consensus 104 -----~l~~~kG------------pav~~~-r~~~Dr~~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~g~V~GV~t~dG 164 (637)
T 2zxi_A 104 -----MLNTRKG------------KAVQSP-RAQADKKRYREYMKKVCENQENLYI-KQEEVVDIIVKNNQVVGVRTNLG 164 (637)
T ss_dssp -----EESTTSC------------GGGCEE-EEEECHHHHHHHHHHHHHTCTTEEE-EESCEEEEEESSSBEEEEEETTS
T ss_pred -----ecccccC------------ccccch-hhhCCHHHHHHHHHHHHHhCCCCEE-EEeEEEEEEecCCEEEEEEECCC
Confidence 0000000 000111 2467888998888887532 2 25 4679999988877764 788889
Q ss_pred cEEeccEEEecCCCCchhhcc
Q 024233 171 QCYAGDLLVGADGIWSKVRKN 191 (270)
Q Consensus 171 ~~~~ad~vI~AdG~~S~vr~~ 191 (270)
.++.|+.||+|+|.++..+..
T Consensus 165 ~~i~AdaVVLATG~~s~~~~~ 185 (637)
T 2zxi_A 165 VEYKTKAVVVTTGTFLNGVIY 185 (637)
T ss_dssp CEEECSEEEECCTTCBTCEEE
T ss_pred cEEEeCEEEEccCCCccCcee
Confidence 899999999999999876643
No 61
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.45 E-value=1.5e-12 Score=109.47 Aligned_cols=137 Identities=13% Similarity=0.157 Sum_probs=83.9
Q ss_pred cceEEEEcCCHHHHHHHHHHHhC--CCcEEEEeccCccccCCCC---cccceeechhHHHHHHHcCcChHHHHHHhcccc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMSAIRGEGQ---YRGPIQIQSNALAALEAIDLDVAEEVMRAGCVT 93 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~--g~~V~viE~~~~~~~~~g~---~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~ 93 (270)
.+||+|||||++|+++|+.|+++ |++|+|||+.+........ ......+.+.....|++++. ..
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv-----------~~ 147 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGV-----------PY 147 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTC-----------CC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCC-----------cc
Confidence 57999999999999999999997 9999999998653221110 00012223333444444321 00
Q ss_pred CccccccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCC--c-cEEeCceEEEEEecCC---------
Q 024233 94 GDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGD--E-IILNESNVIDFKDHGD--------- 161 (270)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~--~-~i~~~~~v~~i~~~~~--------- 161 (270)
. . .+. +....+..++.+.|.+.+.. . .++.+++|+++..+++
T Consensus 148 ~-------~--~G~-----------------~~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~ 201 (344)
T 3jsk_A 148 E-------D--EGD-----------------YVVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSD 201 (344)
T ss_dssp E-------E--CSS-----------------EEEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC---------
T ss_pred c-------c--cCC-----------------eEEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCccccccccc
Confidence 0 0 000 00122355666777666422 2 4888999999987652
Q ss_pred ----------eE---EEEE----c--------CCcEEeccEEEecCCCCchhhccc
Q 024233 162 ----------KV---SVVL----E--------NGQCYAGDLLVGADGIWSKVRKNL 192 (270)
Q Consensus 162 ----------~~---~v~~----~--------~g~~~~ad~vI~AdG~~S~vr~~~ 192 (270)
.+ .+.. . +..+++|++||+|+|..|.+++.+
T Consensus 202 ~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~s~v~~~~ 257 (344)
T 3jsk_A 202 DGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINAPVIISTTGHDGPFGAFS 257 (344)
T ss_dssp -------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEECSEEEECCCSSSSSSCHH
T ss_pred ccccccCCCceEeEEEeeeeeeeccCCcccccCceEEEcCEEEECCCCCchhhHHH
Confidence 22 2221 1 234799999999999999966554
No 62
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.44 E-value=2.1e-12 Score=116.85 Aligned_cols=152 Identities=18% Similarity=0.284 Sum_probs=91.2
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCccccee-e-chhHHHHHHHcCcChHHH-HHHhccccC
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQ-I-QSNALAALEAIDLDVAEE-VMRAGCVTG 94 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~-l-~~~~~~~l~~~~~~~~~~-l~~~~~~~~ 94 (270)
..+||+|||||++|+++|+.|+++|.+|+|||+.+......+- ..... + .....+.+..++ ++... ....+..
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c-~ps~gGia~~~lv~el~al~-g~~~~~~d~~gi~-- 95 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSC-NPAIGGVAKGQITREIDALG-GEMGKAIDATGIQ-- 95 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSS-CSEEECHHHHHHHHHHHHHT-CSHHHHHHHHEEE--
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCcc-ccchhhhhHHHHHHHHHhcc-cHHHHHHHhcCCc--
Confidence 4689999999999999999999999999999998532222110 00111 0 011122222232 11111 1111110
Q ss_pred ccccccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCC--c-cEEeCceEEEEEecCCeEE-EEEcCC
Q 024233 95 DRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGD--E-IILNESNVIDFKDHGDKVS-VVLENG 170 (270)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~--~-~i~~~~~v~~i~~~~~~~~-v~~~~g 170 (270)
+. ......+ .....+ ...+++..+.+.|.+.+.. . .++ +.+|+++..+++.+. |.+.+|
T Consensus 96 --f~-~l~~~kg------------pav~~~-r~~~Dr~~l~~~L~~~l~~~~GV~I~-~~~V~~L~~d~g~V~GV~t~~G 158 (641)
T 3cp8_A 96 --FR-MLNRSKG------------PAMHSP-RAQADKTQYSLYMRRIVEHEPNIDLL-QDTVIGVSANSGKFSSVTVRSG 158 (641)
T ss_dssp --EE-EECSSSC------------TTTCEE-EEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTS
T ss_pred --hh-hcccccC------------ccccch-hhhcCHHHHHHHHHHHHHhCCCCEEE-eeEEEEEEecCCEEEEEEECCC
Confidence 00 0000000 000111 2567898998888877532 2 254 569999988888876 888889
Q ss_pred cEEeccEEEecCCCCchhhc
Q 024233 171 QCYAGDLLVGADGIWSKVRK 190 (270)
Q Consensus 171 ~~~~ad~vI~AdG~~S~vr~ 190 (270)
.++.||.||+|+|.++..+-
T Consensus 159 ~~i~Ad~VVLATG~~s~~~i 178 (641)
T 3cp8_A 159 RAIQAKAAILACGTFLNGLI 178 (641)
T ss_dssp CEEEEEEEEECCTTCBTCEE
T ss_pred cEEEeCEEEECcCCCCCccc
Confidence 89999999999999986543
No 63
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=99.43 E-value=1.4e-12 Score=111.48 Aligned_cols=37 Identities=35% Similarity=0.643 Sum_probs=33.8
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCcc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSA 54 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~ 54 (270)
..+||+|||||++|+++|++|+++|++|+|||+....
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~ 41 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPE 41 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCC
Confidence 4579999999999999999999999999999998643
No 64
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.43 E-value=9.3e-13 Score=109.14 Aligned_cols=111 Identities=19% Similarity=0.201 Sum_probs=80.0
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcccc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 98 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 98 (270)
++||+|||||++|+++|+.|+++|++|+|||+.+...... . ...
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~----------------------~--------------~~~ 45 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFA----------------------S--------------HSH 45 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGC----------------------S--------------CCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccc----------------------h--------------hhc
Confidence 3799999999999999999999999999999974210000 0 000
Q ss_pred ccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCC--ccEEeCceEEEEEecCCeEEEEEcCCcEEecc
Q 024233 99 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGD--EIILNESNVIDFKDHGDKVSVVLENGQCYAGD 176 (270)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~ad 176 (270)
.+ +.....++.++.+.+.+.+.. .+.+...+|+++..+++++.+.+.+++++.+|
T Consensus 46 ~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d 102 (297)
T 3fbs_A 46 GF-----------------------LGQDGKAPGEIIAEARRQIERYPTIHWVEGRVTDAKGSFGEFIVEIDGGRRETAG 102 (297)
T ss_dssp SS-----------------------TTCTTCCHHHHHHHHHHHHTTCTTEEEEESCEEEEEEETTEEEEEETTSCEEEEE
T ss_pred CC-----------------------cCCCCCCHHHHHHHHHHHHHhcCCeEEEEeEEEEEEEcCCeEEEEECCCCEEEcC
Confidence 00 000123456777777776543 22333569999999888899999999899999
Q ss_pred EEEecCCCCchh
Q 024233 177 LLVGADGIWSKV 188 (270)
Q Consensus 177 ~vI~AdG~~S~v 188 (270)
.||+|+|.++..
T Consensus 103 ~vviAtG~~~~~ 114 (297)
T 3fbs_A 103 RLILAMGVTDEL 114 (297)
T ss_dssp EEEECCCCEEEC
T ss_pred EEEECCCCCCCC
Confidence 999999997644
No 65
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.43 E-value=7.9e-13 Score=112.93 Aligned_cols=119 Identities=16% Similarity=0.271 Sum_probs=83.7
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCccc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 97 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~ 97 (270)
..+||+|||||++|+++|+.|+++|++|+|||+.+.. | +.+... . .....
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~----g---------------------g~~~~~----~-~~~~~ 62 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQL----G---------------------GQLAAL----Y-PEKHI 62 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS----C---------------------HHHHHT----C-TTSEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCC----C---------------------Cccccc----C-CCccc
Confidence 4689999999999999999999999999999998531 1 111000 0 00000
Q ss_pred cccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhc---CCccEEeCceEEEEEecCC-eEEEEEcCCcEE
Q 024233 98 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDHGD-KVSVVLENGQCY 173 (270)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~-~~~v~~~~g~~~ 173 (270)
.. . .+.+ .+++.++.+.|.+.+ +.. ++++++|+++..+++ .+.+.+.+|+++
T Consensus 63 ---~~---------~--------~~~~---~~~~~~~~~~l~~~~~~~~~~-~~~~~~v~~i~~~~~~~~~v~~~~g~~~ 118 (360)
T 3ab1_A 63 ---YD---------V--------AGFP---EVPAIDLVESLWAQAERYNPD-VVLNETVTKYTKLDDGTFETRTNTGNVY 118 (360)
T ss_dssp ---CC---------S--------TTCS---SEEHHHHHHHHHHHHHTTCCE-EECSCCEEEEEECTTSCEEEEETTSCEE
T ss_pred ---cc---------C--------CCCC---CCCHHHHHHHHHHHHHHhCCE-EEcCCEEEEEEECCCceEEEEECCCcEE
Confidence 00 0 0111 245677777777664 333 788999999998765 788889888899
Q ss_pred eccEEEecCCCCchhhc
Q 024233 174 AGDLLVGADGIWSKVRK 190 (270)
Q Consensus 174 ~ad~vI~AdG~~S~vr~ 190 (270)
++|.||+|+|.+|..++
T Consensus 119 ~~~~li~AtG~~~~~~~ 135 (360)
T 3ab1_A 119 RSRAVLIAAGLGAFEPR 135 (360)
T ss_dssp EEEEEEECCTTCSCCBC
T ss_pred EeeEEEEccCCCcCCCC
Confidence 99999999999775444
No 66
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.43 E-value=8.3e-13 Score=110.69 Aligned_cols=114 Identities=18% Similarity=0.267 Sum_probs=80.1
Q ss_pred CCCCCcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhcccc
Q 024233 14 DSENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVT 93 (270)
Q Consensus 14 ~~~~~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~ 93 (270)
+...+.+||+|||||++|+++|+.|+++|++|+|||+. . .+. +.. .
T Consensus 10 ~~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~--gg~------~~~----------------------~--- 55 (323)
T 3f8d_A 10 VKPGEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGET-P--GGQ------LTE----------------------A--- 55 (323)
T ss_dssp CCTTCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-T--TGG------GGG----------------------C---
T ss_pred ccCCCccCEEEECccHHHHHHHHHHHHCCCcEEEEecc-C--CCe------ecc----------------------c---
Confidence 44445689999999999999999999999999999997 1 111 000 0
Q ss_pred CccccccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhc---CCccEEeCceEEEEEecCCeEEEEEcCC
Q 024233 94 GDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDHGDKVSVVLENG 170 (270)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~~~v~~~~g 170 (270)
... .. . .+.+ .+.+.++.+.+.+.+ +.. ++. ++|+++..+++.+.+.+.++
T Consensus 56 -~~~---~~---------~--------~~~~---~~~~~~~~~~~~~~~~~~~v~-~~~-~~v~~i~~~~~~~~v~~~~g 109 (323)
T 3f8d_A 56 -GIV---DD---------Y--------LGLI---EIQASDMIKVFNKHIEKYEVP-VLL-DIVEKIENRGDEFVVKTKRK 109 (323)
T ss_dssp -CEE---CC---------S--------TTST---TEEHHHHHHHHHHHHHTTTCC-EEE-SCEEEEEEC--CEEEEESSS
T ss_pred -ccc---cc---------c--------CCCC---CCCHHHHHHHHHHHHHHcCCE-EEE-EEEEEEEecCCEEEEEECCC
Confidence 000 00 0 0011 145667777776653 344 666 89999999888899999998
Q ss_pred cEEeccEEEecCCCCch
Q 024233 171 QCYAGDLLVGADGIWSK 187 (270)
Q Consensus 171 ~~~~ad~vI~AdG~~S~ 187 (270)
.++.+|.||+|+|.+..
T Consensus 110 ~~~~~d~lvlAtG~~~~ 126 (323)
T 3f8d_A 110 GEFKADSVILGIGVKRR 126 (323)
T ss_dssp CEEEEEEEEECCCCEEC
T ss_pred CEEEcCEEEECcCCCCc
Confidence 89999999999998754
No 67
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.42 E-value=3.3e-12 Score=114.17 Aligned_cols=41 Identities=32% Similarity=0.447 Sum_probs=36.1
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCC
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGE 58 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~ 58 (270)
..+||+|||||++||++|+.|+++|.+|+||||.+.....+
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~GG~s 80 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWGGAT 80 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTG
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcc
Confidence 46899999999999999999999999999999997644333
No 68
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.42 E-value=1.1e-12 Score=110.75 Aligned_cols=120 Identities=18% Similarity=0.266 Sum_probs=83.7
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCccc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 97 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~ 97 (270)
.++||+|||||++|+++|+.|+++|++|+|||+.+.. | +.+... . ....+
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~----g---------------------g~~~~~----~-~~~~~ 53 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEP----G---------------------GQLTAL----Y-PEKYI 53 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS----C---------------------HHHHHT----C-TTSEE
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCC----C---------------------Ceeecc----C-CCcee
Confidence 4589999999999999999999999999999998531 1 111000 0 00000
Q ss_pred cccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCC--ccEEeCceEEEEEecCCeEEEEEcCCcEEec
Q 024233 98 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGD--EIILNESNVIDFKDHGDKVSVVLENGQCYAG 175 (270)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~a 175 (270)
.. . .+.+ .+.+.++.+.|.+.+.. ..++.+++|+++..+++.+.+.+.++.++.+
T Consensus 54 ---~~---------~--------~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~ 110 (335)
T 2zbw_A 54 ---YD---------V--------AGFP---KVYAKDLVKGLVEQVAPFNPVYSLGERAETLEREGDLFKVTTSQGNAYTA 110 (335)
T ss_dssp ---CC---------S--------TTCS---SEEHHHHHHHHHHHHGGGCCEEEESCCEEEEEEETTEEEEEETTSCEEEE
T ss_pred ---ec---------c--------CCCC---CCCHHHHHHHHHHHHHHcCCEEEeCCEEEEEEECCCEEEEEECCCCEEEe
Confidence 00 0 0111 24567777777665432 1377899999999887788888888888999
Q ss_pred cEEEecCCCCchhhc
Q 024233 176 DLLVGADGIWSKVRK 190 (270)
Q Consensus 176 d~vI~AdG~~S~vr~ 190 (270)
|.||+|+|.+|...+
T Consensus 111 ~~lv~AtG~~~~~p~ 125 (335)
T 2zbw_A 111 KAVIIAAGVGAFEPR 125 (335)
T ss_dssp EEEEECCTTSEEEEC
T ss_pred CEEEECCCCCCCCCC
Confidence 999999999765443
No 69
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.42 E-value=8.3e-13 Score=118.91 Aligned_cols=138 Identities=17% Similarity=0.129 Sum_probs=84.7
Q ss_pred CCcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcc
Q 024233 17 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 96 (270)
Q Consensus 17 ~~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~ 96 (270)
+..+||+|||||++|+++|+.|+++|++|+|||+.+.. | +... ...+ +++ .......
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~----G----G~w~-------~~~~-pg~-------~~d~~~~ 70 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDV----G----GVWY-------WNRY-PGA-------RCDIESI 70 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS----C----THHH-------HCCC-TTC-------BCSSCTT
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCC----C----Cccc-------ccCC-Cce-------eeccccc
Confidence 34689999999999999999999999999999998532 1 0000 0000 000 0000000
Q ss_pred ccccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhc---CC-ccEEeCceEEEEEecC--CeEEEEEcCC
Q 024233 97 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GD-EIILNESNVIDFKDHG--DKVSVVLENG 170 (270)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~---~~-~~i~~~~~v~~i~~~~--~~~~v~~~~g 170 (270)
...+. ..... ......+ ....++.++.+.|...+ +. ..++++++|+++..++ +.|.|++.+|
T Consensus 71 ~~~~~--f~~~~---------~~~~~~~-~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G 138 (542)
T 1w4x_A 71 EYCYS--FSEEV---------LQEWNWT-ERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHG 138 (542)
T ss_dssp TSSCC--SCHHH---------HHHCCCC-BSSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTC
T ss_pred ccccc--cChhh---------hhccCcc-cccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCC
Confidence 00000 00000 0000001 02346777877775542 32 2489999999998765 3688999999
Q ss_pred cEEeccEEEecCCCCchhh
Q 024233 171 QCYAGDLLVGADGIWSKVR 189 (270)
Q Consensus 171 ~~~~ad~vI~AdG~~S~vr 189 (270)
++++||+||+|+|.+|.-+
T Consensus 139 ~~~~ad~vV~AtG~~s~p~ 157 (542)
T 1w4x_A 139 DRIRARYLIMASGQLSVPQ 157 (542)
T ss_dssp CEEEEEEEEECCCSCCCCC
T ss_pred CEEEeCEEEECcCCCCCCC
Confidence 8999999999999987543
No 70
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.41 E-value=2.4e-12 Score=109.25 Aligned_cols=146 Identities=16% Similarity=0.128 Sum_probs=83.9
Q ss_pred ceEEEEcCCHHHHHHHHHHHh---CCCcEEEEeccCccccCCCCcc----c---------ceeechhHHHHHHHcCcChH
Q 024233 20 LRILVAGGGIGGLVFALAAKR---KGFEVLVFEKDMSAIRGEGQYR----G---------PIQIQSNALAALEAIDLDVA 83 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~---~g~~V~viE~~~~~~~~~g~~~----~---------~~~l~~~~~~~l~~~~~~~~ 83 (270)
+||+|||||++|+++|+.|++ +|++|+||||.+.......... . .+...+.....+. ...
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~----~~~ 77 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQ----RFY 77 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTH----HHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHH----HHH
Confidence 599999999999999999999 9999999999854221110000 0 0111111111111 112
Q ss_pred HHHHHhccccCccccccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCeE
Q 024233 84 EEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKV 163 (270)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~ 163 (270)
+.+...+....... ... +.. ..+. .... ...-.-..+.+.|.+.++.. |+++++|++|+.++++|
T Consensus 78 ~~~~~~g~~~~~~~--~~~---~~~--~~~~---~~~~----~~~~g~~~l~~~l~~~~g~~-i~~~~~V~~i~~~~~~~ 142 (342)
T 3qj4_A 78 DELLAYGVLRPLSS--PIE---GMV--MKEG---DCNF----VAPQGISSIIKHYLKESGAE-VYFRHRVTQINLRDDKW 142 (342)
T ss_dssp HHHHHTTSCEECCS--CEE---TCC--C--C---CEEE----ECTTCTTHHHHHHHHHHTCE-EESSCCEEEEEECSSSE
T ss_pred HHHHhCCCeecCch--hhc---cee--ccCC---ccce----ecCCCHHHHHHHHHHhcCCE-EEeCCEEEEEEEcCCEE
Confidence 22222222110000 000 000 0000 0000 00001245666677766665 99999999999999999
Q ss_pred EEEEcCCcEEeccEEEecCCC
Q 024233 164 SVVLENGQCYAGDLLVGADGI 184 (270)
Q Consensus 164 ~v~~~~g~~~~ad~vI~AdG~ 184 (270)
.+.+.+|+++++|.||.|...
T Consensus 143 ~v~~~~g~~~~ad~vV~A~p~ 163 (342)
T 3qj4_A 143 EVSKQTGSPEQFDLIVLTMPV 163 (342)
T ss_dssp EEEESSSCCEEESEEEECSCH
T ss_pred EEEECCCCEEEcCEEEECCCH
Confidence 999999988999999999874
No 71
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.41 E-value=6.8e-13 Score=119.19 Aligned_cols=137 Identities=18% Similarity=0.204 Sum_probs=86.5
Q ss_pred CcceEEEEcCCHHHHHHHHHHH-hCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcc
Q 024233 18 KKLRILVAGGGIGGLVFALAAK-RKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 96 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La-~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~ 96 (270)
..+||+|||||++|+++|+.|+ +.|++|+|||+.+.. | +... ...+ +++ .......
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~----G----Gtw~-------~~~y-pg~-------~~d~~s~ 63 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGP----G----GTWY-------WNRY-PGA-------LSDTESH 63 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSS----C----THHH-------HCCC-TTC-------EEEEEGG
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCC----C----Cccc-------ccCC-CCc-------eecCCcc
Confidence 4589999999999999999999 999999999998531 1 0000 0000 000 0000000
Q ss_pred ccccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhc---CCc-cEEeCceEEEEEecCC--eEEEEEcCC
Q 024233 97 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDE-IILNESNVIDFKDHGD--KVSVVLENG 170 (270)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~---~~~-~i~~~~~v~~i~~~~~--~~~v~~~~g 170 (270)
...+. .... .......+ ....++.++.+.|.+.+ +.. .++++++|+++..+++ .|.|.+.+|
T Consensus 64 ~~~~~--~~~~---------~~~~~~~~-~~~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G 131 (540)
T 3gwf_A 64 LYRFS--FDRD---------LLQESTWK-TTYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHG 131 (540)
T ss_dssp GSSCC--SCHH---------HHHHCCCS-BSEEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTS
T ss_pred eeeec--cccc---------cccCCCCc-ccCCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCC
Confidence 00000 0000 00001111 13567888888876653 331 4899999999988765 789999999
Q ss_pred cEEeccEEEecCCCCchhh
Q 024233 171 QCYAGDLLVGADGIWSKVR 189 (270)
Q Consensus 171 ~~~~ad~vI~AdG~~S~vr 189 (270)
++++||.||+|+|.+|.-+
T Consensus 132 ~~i~ad~lV~AtG~~s~p~ 150 (540)
T 3gwf_A 132 EVYRAKYVVNAVGLLSAIN 150 (540)
T ss_dssp CEEEEEEEEECCCSCCSBC
T ss_pred CEEEeCEEEECCcccccCC
Confidence 9999999999999877443
No 72
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.38 E-value=1.4e-12 Score=117.50 Aligned_cols=137 Identities=18% Similarity=0.186 Sum_probs=84.5
Q ss_pred CCcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcc
Q 024233 17 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 96 (270)
Q Consensus 17 ~~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~ 96 (270)
+..+||+|||||++|+++|+.|++.|++|+|||+.+.. | +... ..++ +++ .......
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~----G----Gtw~-------~~~y-pg~-------~~dv~s~ 75 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGV----G----GVWY-------WNRY-PGA-------RCDVESI 75 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS----C----THHH-------HCCC-TTC-------BCSSCTT
T ss_pred CCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCC----C----Cccc-------cCCC-CCc-------eeCCCch
Confidence 34689999999999999999999999999999998531 1 0000 0000 010 0000000
Q ss_pred ccccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhc---CC-ccEEeCceEEEEEecCC--eEEEEEcCC
Q 024233 97 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GD-EIILNESNVIDFKDHGD--KVSVVLENG 170 (270)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~---~~-~~i~~~~~v~~i~~~~~--~~~v~~~~g 170 (270)
. +........ ....... ....++.++.+.|.+.+ +. ..++++++|+++..+++ .|.|.+.+|
T Consensus 76 ~--y~~~f~~~~---------~~~~~~~-~~~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G 143 (549)
T 4ap3_A 76 D--YSYSFSPEL---------EQEWNWS-EKYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRG 143 (549)
T ss_dssp T--SSCCSCHHH---------HHHCCCS-SSSCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTC
T ss_pred h--ccccccccc---------ccCCCCc-cCCCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCC
Confidence 0 000000000 0000001 12346778877776653 33 14899999999987665 789999999
Q ss_pred cEEeccEEEecCCCCchh
Q 024233 171 QCYAGDLLVGADGIWSKV 188 (270)
Q Consensus 171 ~~~~ad~vI~AdG~~S~v 188 (270)
++++||+||+|+|..|.-
T Consensus 144 ~~i~ad~lV~AtG~~s~p 161 (549)
T 4ap3_A 144 DEVSARFLVVAAGPLSNA 161 (549)
T ss_dssp CEEEEEEEEECCCSEEEC
T ss_pred CEEEeCEEEECcCCCCCC
Confidence 999999999999987643
No 73
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.37 E-value=4e-12 Score=106.09 Aligned_cols=111 Identities=17% Similarity=0.247 Sum_probs=71.1
Q ss_pred CCcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcc
Q 024233 17 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 96 (270)
Q Consensus 17 ~~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~ 96 (270)
|+.|||+||||||+|+++|+.|+|+|++|+|||+... .| .+. . .
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~----gg----~~~--~--------------------------~ 47 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTN----RN----RVT--Q--------------------------N 47 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCC----GG----GGS--S--------------------------C
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC----CC----eee--e--------------------------e
Confidence 5679999999999999999999999999999998742 01 000 0 0
Q ss_pred ccccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCC--ccEEeCceEEEEEe-cCCeEEEEEcCCcEE
Q 024233 97 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGD--EIILNESNVIDFKD-HGDKVSVVLENGQCY 173 (270)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~--~~i~~~~~v~~i~~-~~~~~~v~~~~g~~~ 173 (270)
...+.. . ..+...++.+..++++.. ...+....+..+.. +.+.+++.+.+|+++
T Consensus 48 ~~~~~~--------------------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~ 104 (304)
T 4fk1_A 48 SHGFIT--------------------R---DGIKPEEFKEIGLNEVMKYPSVHYYEKTVVMITKQSTGLFEIVTKDHTKY 104 (304)
T ss_dssp BCCSTT--------------------C---TTBCHHHHHHHHHHHHTTSTTEEEEECCEEEEEECTTSCEEEEETTCCEE
T ss_pred cCCccC--------------------C---CCCCHHHHHHHHHHHHHhcCCEEEEeeEEEEeeecCCCcEEEEECCCCEE
Confidence 000000 0 012344555555444321 12334455556554 455678889999999
Q ss_pred eccEEEecCCCCc
Q 024233 174 AGDLLVGADGIWS 186 (270)
Q Consensus 174 ~ad~vI~AdG~~S 186 (270)
++|.||+|+|...
T Consensus 105 ~a~~liiATGs~p 117 (304)
T 4fk1_A 105 LAERVLLATGMQE 117 (304)
T ss_dssp EEEEEEECCCCEE
T ss_pred EeCEEEEccCCcc
Confidence 9999999999754
No 74
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.36 E-value=4.2e-12 Score=107.11 Aligned_cols=119 Identities=19% Similarity=0.292 Sum_probs=81.2
Q ss_pred CCcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcc
Q 024233 17 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 96 (270)
Q Consensus 17 ~~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~ 96 (270)
.+.+||+|||||++|+++|+.|+++|++|+|||+.+......| +.+.... .
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~g---g~~~~~~--------------------------~ 70 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAG---GQLTTTT--------------------------E 70 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTT---CGGGGSS--------------------------E
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcC---cccccch--------------------------h
Confidence 4568999999999999999999999999999999752111111 0000000 0
Q ss_pred ccccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhc---CCccEEeCceEEEEEecCCeEEEEEc---CC
Q 024233 97 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDHGDKVSVVLE---NG 170 (270)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~~~v~~~---~g 170 (270)
. ..+ .+.+ ..+.+.++.+.|.+.+ +.. ++.++ |+++..+++.+.+.+. ++
T Consensus 71 ~------------~~~--------~~~~--~~~~~~~~~~~~~~~~~~~gv~-i~~~~-v~~i~~~~~~~~v~~~~~~~~ 126 (338)
T 3itj_A 71 I------------ENF--------PGFP--DGLTGSELMDRMREQSTKFGTE-IITET-VSKVDLSSKPFKLWTEFNEDA 126 (338)
T ss_dssp E------------CCS--------TTCT--TCEEHHHHHHHHHHHHHHTTCE-EECSC-EEEEECSSSSEEEEETTCSSS
T ss_pred h------------ccc--------CCCc--ccCCHHHHHHHHHHHHHHcCCE-EEEeE-EEEEEEcCCEEEEEEEecCCC
Confidence 0 000 0111 1345677777776654 444 77777 9999988888888873 67
Q ss_pred cEEeccEEEecCCCCchh
Q 024233 171 QCYAGDLLVGADGIWSKV 188 (270)
Q Consensus 171 ~~~~ad~vI~AdG~~S~v 188 (270)
.++.+|.||+|+|.++..
T Consensus 127 ~~~~~d~vvlAtG~~~~~ 144 (338)
T 3itj_A 127 EPVTTDAIILATGASAKR 144 (338)
T ss_dssp CCEEEEEEEECCCEEECC
T ss_pred cEEEeCEEEECcCCCcCC
Confidence 789999999999986543
No 75
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.36 E-value=3.3e-12 Score=112.89 Aligned_cols=150 Identities=20% Similarity=0.205 Sum_probs=83.7
Q ss_pred ceEEEEcCCHHHHHHHHHHHh---CCCc---EEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhcccc
Q 024233 20 LRILVAGGGIGGLVFALAAKR---KGFE---VLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVT 93 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~---~g~~---V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~ 93 (270)
+||+|||||++|+++|..|++ .|++ |+|||+.+... +...+.......+ + + ...
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~G-G~w~~~~~~g~~~--------~--g---------~~~ 62 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWG-GQWNYTWRTGLDE--------N--G---------EPV 62 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSC-GGGSCCSCCSBCT--------T--S---------SBC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCC-CEeecCCCCCccc--------c--C---------CCC
Confidence 699999999999999999999 9999 99999985321 1111000000000 0 0 000
Q ss_pred CccccccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhc---CCc-cEEeCceEEEEEecCC--eEEEEE
Q 024233 94 GDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDE-IILNESNVIDFKDHGD--KVSVVL 167 (270)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~---~~~-~i~~~~~v~~i~~~~~--~~~v~~ 167 (270)
...+..............+.........+......+++..+.+.|.+.+ +.. .++++++|+++..+++ .|.|++
T Consensus 63 ~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~ 142 (464)
T 2xve_A 63 HSSMYRYLWSNGPKECLEFADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTV 142 (464)
T ss_dssp CCCCCTTCBCSSCGGGTCBTTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEE
T ss_pred cCccccchhhcCChhhcccCCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEE
Confidence 0000000000000000001100000000000012457888888887654 332 3888999999998766 777777
Q ss_pred cC---C--cEEeccEEEecCCCCchhh
Q 024233 168 EN---G--QCYAGDLLVGADGIWSKVR 189 (270)
Q Consensus 168 ~~---g--~~~~ad~vI~AdG~~S~vr 189 (270)
.+ | .++.+|.||+|+|.+|..+
T Consensus 143 ~~~~~g~~~~~~~d~VVvAtG~~s~p~ 169 (464)
T 2xve_A 143 QDHTTDTIYSEEFDYVVCCTGHFSTPY 169 (464)
T ss_dssp EETTTTEEEEEEESEEEECCCSSSSBC
T ss_pred EEcCCCceEEEEcCEEEECCCCCCCCc
Confidence 65 4 5789999999999876554
No 76
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.36 E-value=1.8e-11 Score=111.32 Aligned_cols=163 Identities=17% Similarity=0.150 Sum_probs=89.4
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCC--CcEEEEeccCccccCCCCcccceeec--h-hH-----HHHHHHcC----cCh-
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKG--FEVLVFEKDMSAIRGEGQYRGPIQIQ--S-NA-----LAALEAID----LDV- 82 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g--~~V~viE~~~~~~~~~g~~~~~~~l~--~-~~-----~~~l~~~~----~~~- 82 (270)
..+||+|||||++||++|+.|+++| .+|+||||.+.....+....+++... . .+ .+.++.-. ...
T Consensus 4 ~~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v 83 (602)
T 1kf6_A 4 FQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVV 83 (602)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCCHHHHHHHHHHHTTTCSCHHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCCHHHHHHHHHHhcCCCCCHHHH
Confidence 3579999999999999999999999 99999999865432222222233211 0 11 11111100 011
Q ss_pred ----------HHHHHHhccccCccccccccCCCCceeEeecCCcccccCCCCeEEE---EeHHHHHHHHHHhcCC---cc
Q 024233 83 ----------AEEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRV---ISRMTLQQILAKAVGD---EI 146 (270)
Q Consensus 83 ----------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---i~~~~l~~~L~~~~~~---~~ 146 (270)
.+.+...+.... ....+... .... .....+.... .....+.+.|.+++.. ..
T Consensus 84 ~~~~~~~~~~i~~L~~~Gv~f~-------~~~~g~~~--~~~~---gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv~ 151 (602)
T 1kf6_A 84 DYFVHHCPTEMTQLELWGCPWS-------RRPDGSVN--VRRF---GGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQ 151 (602)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCC-------BCTTSSBC--CBCC---TTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTEE
T ss_pred HHHHHHHHHHHHHHHHcCCCcc-------cCCCCccc--cccc---CCccCCeEEEcCCCCHHHHHHHHHHHHHhCCCcE
Confidence 111222221110 00001000 0000 0000010000 1245778888777521 23
Q ss_pred EEeCceEEEEEecCCeEE---EE-EcCCc--EEeccEEEecCCCCchhhccc
Q 024233 147 ILNESNVIDFKDHGDKVS---VV-LENGQ--CYAGDLLVGADGIWSKVRKNL 192 (270)
Q Consensus 147 i~~~~~v~~i~~~~~~~~---v~-~~~g~--~~~ad~vI~AdG~~S~vr~~~ 192 (270)
++.+++|+++..+++.+. +. +.+|+ .+.|+.||+|+|.+|.++...
T Consensus 152 i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~~~~~ 203 (602)
T 1kf6_A 152 RFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYN 203 (602)
T ss_dssp EEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCCGGGSSSB
T ss_pred EEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCcccccCc
Confidence 889999999998777542 22 25676 799999999999999987654
No 77
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.35 E-value=7.3e-12 Score=113.42 Aligned_cols=165 Identities=17% Similarity=0.210 Sum_probs=86.8
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechh-----------HHHHHHH---cC----
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSN-----------ALAALEA---ID---- 79 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~-----------~~~~l~~---~~---- 79 (270)
..+||+|||||++|+++|+.|+++|++|+|||+.+.....+....+++..... ....+.. .+
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~ 204 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNIN 204 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 35799999999999999999999999999999987543333222233321110 0011110 00
Q ss_pred -cChHHHHHHhccccCccccccccCCCCceeEeecCCcccccCCCCeEE-----EEeHHHHHHHHHHhc---CCccEEeC
Q 024233 80 -LDVAEEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTR-----VISRMTLQQILAKAV---GDEIILNE 150 (270)
Q Consensus 80 -~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~i~~~~l~~~L~~~~---~~~~i~~~ 150 (270)
..+...+.+........+.. .+..-... ... .....+... ......+.+.|.+.+ +.. ++++
T Consensus 205 ~~~~v~~~~~~~~~~i~~l~~--~Gv~~~~~---~~~---gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv~-i~~~ 275 (572)
T 1d4d_A 205 DPELVKVLANNSSDSIDWLTS--MGADMTDV---GRM---GGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGTD-IRLN 275 (572)
T ss_dssp CHHHHHHHHHTHHHHHHHHHH--HTCCCCEE---ECC---TTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCE-EESS
T ss_pred CHHHHHHHHHccHHHHHHHHh--cCCccccc---ccc---CCCcCCeeEecCCCCCCHHHHHHHHHHHHHHcCCe-EEec
Confidence 00111111100000000000 00000000 000 000011111 123567777777764 444 8999
Q ss_pred ceEEEEEecC-CeEE-EEE--cCCc--EEeccEEEecCCCCchhhcc
Q 024233 151 SNVIDFKDHG-DKVS-VVL--ENGQ--CYAGDLLVGADGIWSKVRKN 191 (270)
Q Consensus 151 ~~v~~i~~~~-~~~~-v~~--~~g~--~~~ad~vI~AdG~~S~vr~~ 191 (270)
++|+++..++ +.+. |.. .+|+ ++.||.||+|+|.+|..++.
T Consensus 276 t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~~~~~ 322 (572)
T 1d4d_A 276 SRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAKNNER 322 (572)
T ss_dssp EEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCTTCHHH
T ss_pred CEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCccCHHH
Confidence 9999998766 5443 333 3664 68999999999999976543
No 78
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.34 E-value=8.9e-12 Score=104.10 Aligned_cols=112 Identities=26% Similarity=0.385 Sum_probs=79.5
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCC-cEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcccc
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 98 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~-~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 98 (270)
+||+|||||++|+++|+.|+++|+ +|+|||+... .|. + ... . ...
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~~----gg~----~-~~~--------------------~-----~~~ 47 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMP----GGQ----I-TGS--------------------S-----EIE 47 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSSST----TCG----G-GGC--------------------S-----CBC
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCCCC----Ccc----c-ccc--------------------c-----ccc
Confidence 699999999999999999999999 9999999621 110 0 000 0 000
Q ss_pred ccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhc---CCccEEeCceEEEEEecCCeEEEEEcCCcEEec
Q 024233 99 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDHGDKVSVVLENGQCYAG 175 (270)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~a 175 (270)
.+ .+.+ ..+++.++.+.|.+.+ +.. ++. ++|+++..+++.+.+.+.+|+++++
T Consensus 48 ~~--------------------~~~~--~~~~~~~~~~~l~~~~~~~~v~-~~~-~~v~~i~~~~~~~~v~~~~g~~~~~ 103 (311)
T 2q0l_A 48 NY--------------------PGVK--EVVSGLDFMQPWQEQCFRFGLK-HEM-TAVQRVSKKDSHFVILAEDGKTFEA 103 (311)
T ss_dssp CS--------------------TTCC--SCBCHHHHHHHHHHHHHTTSCE-EEC-SCEEEEEEETTEEEEEETTSCEEEE
T ss_pred cC--------------------CCCc--ccCCHHHHHHHHHHHHHHcCCE-EEE-EEEEEEEEcCCEEEEEEcCCCEEEC
Confidence 00 0011 1346677777776654 333 555 7899999888888888888889999
Q ss_pred cEEEecCCCCchhh
Q 024233 176 DLLVGADGIWSKVR 189 (270)
Q Consensus 176 d~vI~AdG~~S~vr 189 (270)
|.||+|+|.++...
T Consensus 104 ~~vv~AtG~~~~~~ 117 (311)
T 2q0l_A 104 KSVIIATGGSPKRT 117 (311)
T ss_dssp EEEEECCCEEECCC
T ss_pred CEEEECCCCCCCCC
Confidence 99999999877544
No 79
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.34 E-value=9e-12 Score=104.80 Aligned_cols=115 Identities=21% Similarity=0.228 Sum_probs=81.6
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCccc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 97 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~ 97 (270)
..+||+|||||++|+++|+.|+++|++|+|||+.+.. | +.+... . +...+
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~----g---------------------G~~~~~----~-~~~~~ 55 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQL----G---------------------GQLSAL----Y-PEKYI 55 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS----C---------------------HHHHHH----C-TTSEE
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCC----C---------------------ceehhc----C-CCceE
Confidence 3579999999999999999999999999999998631 1 111110 0 00000
Q ss_pred cccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCC--ccEEeCceEEEEEecCC-eEEEEEcCCcEEe
Q 024233 98 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGD--EIILNESNVIDFKDHGD-KVSVVLENGQCYA 174 (270)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~-~~~v~~~~g~~~~ 174 (270)
.+ . .+.+ .+.+.++.+.|.+.+.. ..++++++|+++..+++ .+.+.+.+++ +.
T Consensus 56 ---~~---------~--------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~ 111 (332)
T 3lzw_A 56 ---YD---------V--------AGFP---KIRAQELINNLKEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEET-HY 111 (332)
T ss_dssp ---CC---------S--------TTCS---SEEHHHHHHHHHHHHTTSCCEEECSCCEEEEEECTTSCEEEEESSEE-EE
T ss_pred ---ec---------c--------CCCC---CCCHHHHHHHHHHHHHHhCCcEEccCEEEEEEECCCCcEEEEECCCE-EE
Confidence 00 0 0111 24677888888777543 23888999999998776 7888888886 99
Q ss_pred ccEEEecCCCCc
Q 024233 175 GDLLVGADGIWS 186 (270)
Q Consensus 175 ad~vI~AdG~~S 186 (270)
+|.||+|+|.++
T Consensus 112 ~d~vVlAtG~~~ 123 (332)
T 3lzw_A 112 SKTVIITAGNGA 123 (332)
T ss_dssp EEEEEECCTTSC
T ss_pred eCEEEECCCCCc
Confidence 999999999954
No 80
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.34 E-value=2.3e-12 Score=113.78 Aligned_cols=57 Identities=18% Similarity=0.194 Sum_probs=47.9
Q ss_pred HHHHHHHHHhcCCccEEeCceEEEEEecCCeEEEEEcCCcEEeccEEEecCCCCchh
Q 024233 132 MTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLVGADGIWSKV 188 (270)
Q Consensus 132 ~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~ad~vI~AdG~~S~v 188 (270)
..|.+.|.+.++...|+++++|++|+.+++++.|++.+|++++||.||.|...+...
T Consensus 235 ~~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vi~a~p~~~~~ 291 (470)
T 3i6d_A 235 QTLVEEIEKQLKLTKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPHKAAA 291 (470)
T ss_dssp HHHHHHHHHTCCSEEEECSCCEEEEEECSSSEEEEESSSCEEEESEEEECSCHHHHH
T ss_pred HHHHHHHHHhcCCCEEEeCCceEEEEEcCCeEEEEECCCCEEECCEEEECCCHHHHH
Confidence 367777777766434999999999999988999999999899999999999977643
No 81
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.32 E-value=2.4e-12 Score=115.78 Aligned_cols=138 Identities=18% Similarity=0.145 Sum_probs=83.0
Q ss_pred CCcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcc
Q 024233 17 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 96 (270)
Q Consensus 17 ~~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~ 96 (270)
+..+||+|||||++|+++|+.|++.|++|+|||+++.. | +.. ....+ +++ .......
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~----G----Gtw-------~~~~y-Pg~-------~~d~~~~ 63 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDV----G----GTW-------YWNRY-PGC-------RLDTESY 63 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS----C----THH-------HHCCC-TTC-------BCSSCHH
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCC----C----Ccc-------ccCCC-Cce-------eecCchh
Confidence 34589999999999999999999999999999998531 1 000 00000 000 0000000
Q ss_pred ccccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhc---CC-ccEEeCceEEEEEecC--CeEEEEEcCC
Q 024233 97 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GD-EIILNESNVIDFKDHG--DKVSVVLENG 170 (270)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~---~~-~~i~~~~~v~~i~~~~--~~~~v~~~~g 170 (270)
...+. +.... ....... ....++.++.+.+.+.+ +. ..++++++|+++..++ +.|.|++.+|
T Consensus 64 ~y~~~----------f~~~~-~~~~~~~-~~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G 131 (545)
T 3uox_A 64 AYGYF----------ALKGI-IPEWEWS-ENFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNE 131 (545)
T ss_dssp HHCHH----------HHTTS-STTCCCS-BSSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTT
T ss_pred hcccc----------cCccc-ccCCCcc-ccCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCC
Confidence 00000 00000 0000000 12346777777765543 33 2489999999998754 4789999999
Q ss_pred cEEeccEEEecCCCCchhh
Q 024233 171 QCYAGDLLVGADGIWSKVR 189 (270)
Q Consensus 171 ~~~~ad~vI~AdG~~S~vr 189 (270)
++++||+||+|+|.+|.-+
T Consensus 132 ~~~~ad~lV~AtG~~s~p~ 150 (545)
T 3uox_A 132 EVVTCRFLISATGPLSASR 150 (545)
T ss_dssp EEEEEEEEEECCCSCBC--
T ss_pred CEEEeCEEEECcCCCCCCc
Confidence 9999999999999876443
No 82
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.32 E-value=6.9e-12 Score=112.72 Aligned_cols=48 Identities=25% Similarity=0.341 Sum_probs=34.1
Q ss_pred CCcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccce
Q 024233 17 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPI 65 (270)
Q Consensus 17 ~~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~ 65 (270)
+..+||+|||||++||++|+.|++ |.+|+||||.+.....+....+++
T Consensus 6 ~~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g~s~~a~Ggi 53 (540)
T 1chu_A 6 EHSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEGSTFYAQGGI 53 (540)
T ss_dssp SEECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC----------
T ss_pred CCCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCCChhhcCCCE
Confidence 346899999999999999999999 999999999865443333333333
No 83
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=99.31 E-value=3.5e-13 Score=114.78 Aligned_cols=46 Identities=22% Similarity=0.421 Sum_probs=37.4
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCC------CcEEEEeccCccccCCCCcccce
Q 024233 20 LRILVAGGGIGGLVFALAAKRKG------FEVLVFEKDMSAIRGEGQYRGPI 65 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g------~~V~viE~~~~~~~~~g~~~~~~ 65 (270)
+||+|||||++|+++|++|+++| .+|+|||+.......++..++.+
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~~~~aS~~~~g~~ 52 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPLTTTDVAAGLW 52 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCGGGSGGGTCCCBC
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCCCCCccccCccee
Confidence 38999999999999999999998 89999999875544454444433
No 84
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.31 E-value=5.5e-11 Score=108.23 Aligned_cols=164 Identities=16% Similarity=0.149 Sum_probs=88.1
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeec-----hhHHH-----HHHHc----C----
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQ-----SNALA-----ALEAI----D---- 79 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~-----~~~~~-----~l~~~----~---- 79 (270)
..+||+|||||++||++|+.|+++|.+|+||||.......+....+++... +.+.. .++.- +
T Consensus 17 ~~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~ds~~~~~~dtl~~g~~l~d~~~v 96 (621)
T 2h88_A 17 HEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEDDNWRWHFYDTVKGSDWLGDQDAI 96 (621)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHHH
T ss_pred ccCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCCCCchhhCCCcEecCCCCCCCCHHHHHHHHHHhcCCCCCHHHH
Confidence 458999999999999999999999999999999865433322222333211 11111 11110 0
Q ss_pred -------cChHHHHHHhccccCccccccccCCCCceeEeecCCcccccC--CCC--eEEE---EeHHHHHHHHHHhcCC-
Q 024233 80 -------LDVAEEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAEK--GLP--VTRV---ISRMTLQQILAKAVGD- 144 (270)
Q Consensus 80 -------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~---i~~~~l~~~L~~~~~~- 144 (270)
....+.+.+.+..... ...+........ ...... +.+ .... .....+.+.|.+++..
T Consensus 97 ~~l~~~s~~~i~~L~~~Gv~f~~-------~~~g~~~~~~~g-g~s~~~g~~~~~~R~~~~~d~tG~~l~~~L~~~~~~~ 168 (621)
T 2h88_A 97 HYMTEQAPAAVIELENYGMPFSR-------TEEGKIYQRAFG-GQSLQFGKGGQAHRCCCVADRTGHSLLHTLYGRSLRY 168 (621)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCB-------CTTSSBCEECCT-TCBSTTTTSCBCCCEECSTTCHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHcCCCccc-------CCCCceeccccC-cccccccCCCcceeEEEecCCCHHHHHHHHHHHHHhC
Confidence 0111222222211100 001111000000 000000 000 0000 1245777888777532
Q ss_pred c-cEEeCceEEEEEecCCeEE-EEE---cCCc--EEeccEEEecCCCCchhh
Q 024233 145 E-IILNESNVIDFKDHGDKVS-VVL---ENGQ--CYAGDLLVGADGIWSKVR 189 (270)
Q Consensus 145 ~-~i~~~~~v~~i~~~~~~~~-v~~---~~g~--~~~ad~vI~AdG~~S~vr 189 (270)
. .++.++.|+++..+++.+. +.. .+|+ .+.|+.||+|+|.++.+-
T Consensus 169 gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~y 220 (621)
T 2h88_A 169 DTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYGRTY 220 (621)
T ss_dssp CCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCGGGS
T ss_pred CCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCcccccc
Confidence 1 3899999999988776543 332 4565 689999999999999763
No 85
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.30 E-value=4.1e-11 Score=100.16 Aligned_cols=137 Identities=14% Similarity=0.152 Sum_probs=81.7
Q ss_pred cceEEEEcCCHHHHHHHHHHHhC--CCcEEEEeccCccccCCCCcc---cceeechhHHHHHHHcCcChHHHHHHhcccc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMSAIRGEGQYR---GPIQIQSNALAALEAIDLDVAEEVMRAGCVT 93 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~--g~~V~viE~~~~~~~~~g~~~---~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~ 93 (270)
.+||+|||||++|+++|+.|+++ |++|+|+|+.+.......... ....+.+.....|+.++ ...
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~G-----------v~~ 133 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELE-----------IPY 133 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTT-----------CCC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhC-----------ccc
Confidence 35999999999999999999998 999999999865422221100 01112222333333331 100
Q ss_pred CccccccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCC--c-cEEeCceEEEEEecC----C--eEE
Q 024233 94 GDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGD--E-IILNESNVIDFKDHG----D--KVS 164 (270)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~--~-~i~~~~~v~~i~~~~----~--~~~ 164 (270)
. . .+. .....+...+.+.|.+.+.. . .++.+++|+++..++ + .+.
T Consensus 134 ~-------~--~g~-----------------~~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~ 187 (326)
T 2gjc_A 134 E-------D--EGD-----------------YVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVA 187 (326)
T ss_dssp E-------E--CSS-----------------EEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEE
T ss_pred c-------c--CCC-----------------eEEEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEE
Confidence 0 0 000 00122456667777765421 2 388899999998763 3 332
Q ss_pred ---EEEc------------CCcEEec---------------cEEEecCCCCchhhccc
Q 024233 165 ---VVLE------------NGQCYAG---------------DLLVGADGIWSKVRKNL 192 (270)
Q Consensus 165 ---v~~~------------~g~~~~a---------------d~vI~AdG~~S~vr~~~ 192 (270)
+... ++.++.| ++||+|+|..+++.+.+
T Consensus 188 GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~~~~ 245 (326)
T 2gjc_A 188 GVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFC 245 (326)
T ss_dssp EEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSSTTCCEEEECCCCC--CCSHH
T ss_pred EEEecceeecccccceeccCceEEEEeeccccccccccccCCEEEECcCCCchHHHHH
Confidence 2211 3457999 99999999998888776
No 86
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.29 E-value=2.9e-11 Score=106.70 Aligned_cols=148 Identities=16% Similarity=0.182 Sum_probs=81.1
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCC-----CcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKG-----FEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCV 92 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g-----~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~ 92 (270)
..+||+|||||++|+++|+.|+++| .+|+|||+.+......+....+..+... .++.+ .....+
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~---~~~~l--------~~~~~p 97 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQIS---FLKDL--------VSLRNP 97 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSC---TTSSS--------STTTCT
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCcc---hhhcc--------ccccCC
Confidence 3469999999999999999999999 9999999997432111100000000000 00000 000000
Q ss_pred -cCccccccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhc---CCccEEeCceEEEEEec---CCe--E
Q 024233 93 -TGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDH---GDK--V 163 (270)
Q Consensus 93 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~---~~~~i~~~~~v~~i~~~---~~~--~ 163 (270)
....+..+.. ..+. ...+ .... .....+.++.+.|...+ +.. ++++++|+++..+ ++. +
T Consensus 98 ~~~~~~~~~l~-~~~~-~~~~------~~~~---~~~~~~~~~~~~l~~~~~~~~~~-i~~~~~V~~i~~~~~~~~~~~~ 165 (463)
T 3s5w_A 98 TSPYSFVNYLH-KHDR-LVDF------INLG---TFYPCRMEFNDYLRWVASHFQEQ-SRYGEEVLRIEPMLSAGQVEAL 165 (463)
T ss_dssp TCTTSHHHHHH-HTTC-HHHH------HHHC---CSCCBHHHHHHHHHHHHTTCTTT-EEESEEEEEEEEEEETTEEEEE
T ss_pred CCCCChhHhhh-hcCc-eeec------cccc---CCCCCHHHHHHHHHHHHHHcCCe-EEeCCEEEEEEEecCCCceEEE
Confidence 0000000000 0000 0000 0000 02346778888776654 334 8999999999876 333 3
Q ss_pred EEEEcCCc----EEeccEEEecCCCCchh
Q 024233 164 SVVLENGQ----CYAGDLLVGADGIWSKV 188 (270)
Q Consensus 164 ~v~~~~g~----~~~ad~vI~AdG~~S~v 188 (270)
.+.+.+++ ++.+|.||+|+|..+.+
T Consensus 166 ~V~~~~g~g~~~~~~~d~lVlAtG~~p~~ 194 (463)
T 3s5w_A 166 RVISRNADGEELVRTTRALVVSPGGTPRI 194 (463)
T ss_dssp EEEEEETTSCEEEEEESEEEECCCCEECC
T ss_pred EEEEecCCCceEEEEeCEEEECCCCCCCC
Confidence 67777765 89999999999985543
No 87
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.29 E-value=4.9e-11 Score=105.54 Aligned_cols=150 Identities=21% Similarity=0.210 Sum_probs=83.2
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCccccee--ech--hH----HHHHHHc--------------
Q 024233 21 RILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQ--IQS--NA----LAALEAI-------------- 78 (270)
Q Consensus 21 dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~--l~~--~~----~~~l~~~-------------- 78 (270)
||+|||||++|+++|+.|+++|.+|+||||. .....+....+++. +.+ .. .+.++.-
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~ 79 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTS 79 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHH
Confidence 7999999999999999999999999999998 33222222222332 111 00 0111100
Q ss_pred -CcChHHHHHHhccccCccccccccCCCCceeEeecCCcccccCCCCeEE---EEeHHHHHHHHHHhc---CCccEEeCc
Q 024233 79 -DLDVAEEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTR---VISRMTLQQILAKAV---GDEIILNES 151 (270)
Q Consensus 79 -~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~i~~~~l~~~L~~~~---~~~~i~~~~ 151 (270)
.....+.+.+.+...... ... ......+... ......+.+.|.+.+ +.. ++.++
T Consensus 80 ~~~~~i~~l~~~Gv~~~~~---------------~~~---~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~-i~~~~ 140 (472)
T 2e5v_A 80 EAKNVIETFESWGFEFEED---------------LRL---EGGHTKRRVLHRTDETGREIFNFLLKLAREEGIP-IIEDR 140 (472)
T ss_dssp HHHHHHHHHHHTTCCCCSS---------------CBC---CTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCC-EECCC
T ss_pred HHHHHHHHHHHcCCCCCcc---------------ccc---ccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCE-EEECc
Confidence 001112222222111000 000 0000011000 123456777776654 344 88899
Q ss_pred eEEEEEecCCeEE-EEEc-CCcEEeccEEEecCCCCchhhcc
Q 024233 152 NVIDFKDHGDKVS-VVLE-NGQCYAGDLLVGADGIWSKVRKN 191 (270)
Q Consensus 152 ~v~~i~~~~~~~~-v~~~-~g~~~~ad~vI~AdG~~S~vr~~ 191 (270)
+| ++..+++.+. +... ++.++.||.||+|+|.+|.++..
T Consensus 141 ~v-~l~~~~~~v~Gv~v~~~~g~~~a~~VVlAtGg~~~~~~~ 181 (472)
T 2e5v_A 141 LV-EIRVKDGKVTGFVTEKRGLVEDVDKLVLATGGYSYLYEY 181 (472)
T ss_dssp EE-EEEEETTEEEEEEETTTEEECCCSEEEECCCCCGGGSSS
T ss_pred EE-EEEEeCCEEEEEEEEeCCCeEEeeeEEECCCCCcccCcc
Confidence 99 9988777653 3332 23358899999999999988764
No 88
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.28 E-value=8.5e-11 Score=106.62 Aligned_cols=37 Identities=22% Similarity=0.368 Sum_probs=34.1
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCcc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSA 54 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~ 54 (270)
..+||+|||||++||++|+.|+++|.+|+||||.+..
T Consensus 6 ~~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~ 42 (588)
T 2wdq_A 6 REFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPT 42 (588)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGG
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence 3589999999999999999999999999999998654
No 89
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.28 E-value=3.5e-11 Score=101.19 Aligned_cols=113 Identities=23% Similarity=0.381 Sum_probs=76.3
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCccc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 97 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~ 97 (270)
..+||+|||||++|+++|+.|+++|++|+|||+... | +.+... . .+
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~-----g---g~~~~~---------------------~-----~~ 52 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGMP-----G---GQIAWS---------------------E-----EV 52 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT-----T---GGGGGC---------------------S-----CB
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCCC-----C---cccccc---------------------c-----cc
Confidence 458999999999999999999999999999999821 1 000000 0 00
Q ss_pred cccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhc---CCccEEeCceEEEEEec--CCe-EEEEEcCCc
Q 024233 98 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDH--GDK-VSVVLENGQ 171 (270)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~---~~~~i~~~~~v~~i~~~--~~~-~~v~~~~g~ 171 (270)
..+ . +.+ ..+++.++.+.+.+.+ +.. ++. .+|+++..+ ++. +.+.+.+|+
T Consensus 53 ~~~----~----------------~~~--~~~~~~~~~~~l~~~~~~~gv~-~~~-~~v~~i~~~~~~~~~~~v~~~~g~ 108 (325)
T 2q7v_A 53 ENF----P----------------GFP--EPIAGMELAQRMHQQAEKFGAK-VEM-DEVQGVQHDATSHPYPFTVRGYNG 108 (325)
T ss_dssp CCS----T----------------TCS--SCBCHHHHHHHHHHHHHHTTCE-EEE-CCEEEEEECTTSSSCCEEEEESSC
T ss_pred ccC----C----------------CCC--CCCCHHHHHHHHHHHHHHcCCE-EEe-eeEEEEEeccCCCceEEEEECCCC
Confidence 000 0 011 0234566666665543 444 555 689999876 444 677778888
Q ss_pred EEeccEEEecCCCCchh
Q 024233 172 CYAGDLLVGADGIWSKV 188 (270)
Q Consensus 172 ~~~ad~vI~AdG~~S~v 188 (270)
++.+|.||+|+|.++..
T Consensus 109 ~~~~~~vv~AtG~~~~~ 125 (325)
T 2q7v_A 109 EYRAKAVILATGADPRK 125 (325)
T ss_dssp EEEEEEEEECCCEEECC
T ss_pred EEEeCEEEECcCCCcCC
Confidence 99999999999987643
No 90
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.28 E-value=2e-11 Score=102.42 Aligned_cols=111 Identities=20% Similarity=0.336 Sum_probs=74.7
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCccc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 97 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~ 97 (270)
..+||+|||||++|+++|+.|+++|++|+|||+... | +.+... . .+
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~-----g---g~~~~~---------------------~-----~~ 60 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAVA-----G---GLTAEA---------------------P-----LV 60 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSST-----T---GGGGGC---------------------S-----CB
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCC-----C---cccccc---------------------c-----hh
Confidence 468999999999999999999999999999999521 1 000000 0 00
Q ss_pred cccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhc---CCccEEeCceEEEEEecCCeEEEEEcCCcEEe
Q 024233 98 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDHGDKVSVVLENGQCYA 174 (270)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~ 174 (270)
..+ + +. ..+.+.++.+.+.+.+ +.. ++. .+|+++..+++.+.+.+ ++.++.
T Consensus 61 ~~~------------~--------~~---~~~~~~~~~~~~~~~~~~~~v~-~~~-~~v~~i~~~~~~~~v~~-~~~~~~ 114 (319)
T 3cty_A 61 ENY------------L--------GF---KSIVGSELAKLFADHAANYAKI-REG-VEVRSIKKTQGGFDIET-NDDTYH 114 (319)
T ss_dssp CCB------------T--------TB---SSBCHHHHHHHHHHHHHTTSEE-EET-CCEEEEEEETTEEEEEE-SSSEEE
T ss_pred hhc------------C--------CC---cccCHHHHHHHHHHHHHHcCCE-EEE-eeEEEEEEeCCEEEEEE-CCCEEE
Confidence 000 0 00 0124456666665543 333 555 78999988888777776 566899
Q ss_pred ccEEEecCCCCchh
Q 024233 175 GDLLVGADGIWSKV 188 (270)
Q Consensus 175 ad~vI~AdG~~S~v 188 (270)
+|.||+|+|.++..
T Consensus 115 ~~~li~AtG~~~~~ 128 (319)
T 3cty_A 115 AKYVIITTGTTHKH 128 (319)
T ss_dssp EEEEEECCCEEECC
T ss_pred eCEEEECCCCCccc
Confidence 99999999987643
No 91
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.27 E-value=3.5e-11 Score=102.86 Aligned_cols=138 Identities=19% Similarity=0.251 Sum_probs=80.0
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCC-cEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 96 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~-~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~ 96 (270)
+.+||+|||||++|+++|+.|++.|+ +|+|||+.+ .++. +...+..... + .... ...
T Consensus 3 ~~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~--~Gg~------~~~~~~~~~~---~---------~~~~--~~~ 60 (369)
T 3d1c_A 3 QHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT--VGHS------FKHWPKSTRT---I---------TPSF--TSN 60 (369)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS--TTHH------HHTSCTTCBC---S---------SCCC--CCG
T ss_pred ccCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC--CCCc------cccCcccccc---c---------Ccch--hcc
Confidence 35899999999999999999999999 999999985 1110 0000000000 0 0000 000
Q ss_pred ccccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHh---cCCccEEeCceEEEEEecCCeEEEEEcCCcEE
Q 024233 97 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKA---VGDEIILNESNVIDFKDHGDKVSVVLENGQCY 173 (270)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~---~~~~~i~~~~~v~~i~~~~~~~~v~~~~g~~~ 173 (270)
..++..... ....... ..... ...+++..+.+.|.+. .+.. ++.+++|+++..+++++.+.+.++ ++
T Consensus 61 ~~g~~~~~~----~~~~~~~-~~~~~---~~~~~~~~~~~~l~~~~~~~gv~-i~~~~~v~~i~~~~~~~~v~~~~g-~~ 130 (369)
T 3d1c_A 61 GFGMPDMNA----ISMDTSP-AFTFN---EEHISGETYAEYLQVVANHYELN-IFENTVVTNISADDAYYTIATTTE-TY 130 (369)
T ss_dssp GGTCCCTTC----SSTTCCH-HHHHC---CSSCBHHHHHHHHHHHHHHTTCE-EECSCCEEEEEECSSSEEEEESSC-CE
T ss_pred cCCchhhhh----ccccccc-ccccc---ccCCCHHHHHHHHHHHHHHcCCe-EEeCCEEEEEEECCCeEEEEeCCC-EE
Confidence 000000000 0000000 00000 0134566676666544 3444 888999999998877888888777 69
Q ss_pred eccEEEecCCCCch
Q 024233 174 AGDLLVGADGIWSK 187 (270)
Q Consensus 174 ~ad~vI~AdG~~S~ 187 (270)
.+|.||+|+|.++.
T Consensus 131 ~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 131 HADYIFVATGDYNF 144 (369)
T ss_dssp EEEEEEECCCSTTS
T ss_pred EeCEEEECCCCCCc
Confidence 99999999998763
No 92
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.26 E-value=1.8e-10 Score=105.65 Aligned_cols=37 Identities=32% Similarity=0.476 Sum_probs=34.2
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCcc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSA 54 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~ 54 (270)
..+||+|||||++||++|+.|+++|.+|+||||.+..
T Consensus 4 ~~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~ 40 (660)
T 2bs2_A 4 QYCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVK 40 (660)
T ss_dssp EECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGG
T ss_pred ccccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCC
Confidence 4589999999999999999999999999999998654
No 93
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.26 E-value=1.6e-11 Score=103.53 Aligned_cols=118 Identities=22% Similarity=0.316 Sum_probs=78.9
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCccc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 97 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~ 97 (270)
..+||+|||||++|+++|+.|+++|++|+|||+........+ +.+... ...
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~g---g~~~~~--------------------------~~~ 57 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPG---GQLTTT--------------------------TDV 57 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTT---CGGGGC--------------------------SEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCC---ceeeec--------------------------ccc
Confidence 457999999999999999999999999999998321100111 000000 000
Q ss_pred cccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhc---CCccEEeCceEEEEEecCCeEEEEEcCCcEEe
Q 024233 98 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDHGDKVSVVLENGQCYA 174 (270)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~ 174 (270)
. .. .+.+ ..+++.++.+.|.+.+ +.. ++.++ |+++..+++.+.+.+ ++.+++
T Consensus 58 ~------------~~--------~~~~--~~~~~~~~~~~l~~~~~~~gv~-~~~~~-v~~i~~~~~~~~v~~-~~~~~~ 112 (333)
T 1vdc_A 58 E------------NF--------PGFP--EGILGVELTDKFRKQSERFGTT-IFTET-VTKVDFSSKPFKLFT-DSKAIL 112 (333)
T ss_dssp C------------CS--------TTCT--TCEEHHHHHHHHHHHHHHTTCE-EECCC-CCEEECSSSSEEEEC-SSEEEE
T ss_pred c------------cC--------CCCc--cCCCHHHHHHHHHHHHHHCCCE-EEEeE-EEEEEEcCCEEEEEE-CCcEEE
Confidence 0 00 0111 1245677777776654 334 67675 999988878888877 778899
Q ss_pred ccEEEecCCCCchhh
Q 024233 175 GDLLVGADGIWSKVR 189 (270)
Q Consensus 175 ad~vI~AdG~~S~vr 189 (270)
+|.||+|+|.++...
T Consensus 113 ~~~vv~A~G~~~~~~ 127 (333)
T 1vdc_A 113 ADAVILAIGAVAKRL 127 (333)
T ss_dssp EEEEEECCCEEECCC
T ss_pred cCEEEECCCCCcCCC
Confidence 999999999987543
No 94
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.25 E-value=1.6e-11 Score=108.72 Aligned_cols=56 Identities=14% Similarity=0.083 Sum_probs=44.5
Q ss_pred HHHHHHHHHHhcCCccEEeCceEEEEEecCCeEEEEE---cCCcEEeccEEEecCCCCch
Q 024233 131 RMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVL---ENGQCYAGDLLVGADGIWSK 187 (270)
Q Consensus 131 ~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~~---~~g~~~~ad~vI~AdG~~S~ 187 (270)
-..|.+.|.+.++.. |+.+++|++|..+++++.|.+ .+|++++||.||.|.+.+..
T Consensus 237 ~~~l~~~l~~~lg~~-i~~~~~V~~i~~~~~~~~v~~~~~~~g~~~~ad~vV~a~~~~~~ 295 (478)
T 2ivd_A 237 LQVLIDALAASLGDA-AHVGARVEGLAREDGGWRLIIEEHGRRAELSVAQVVLAAPAHAT 295 (478)
T ss_dssp THHHHHHHHHHHGGG-EESSEEEEEEECC--CCEEEEEETTEEEEEECSEEEECSCHHHH
T ss_pred HHHHHHHHHHHhhhh-EEcCCEEEEEEecCCeEEEEEeecCCCceEEcCEEEECCCHHHH
Confidence 345667777777655 999999999998888888888 67888999999999998754
No 95
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.23 E-value=1e-10 Score=97.74 Aligned_cols=117 Identities=15% Similarity=0.170 Sum_probs=75.9
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcccc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 98 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 98 (270)
.+||+||||||+|+++|+.|+++|++|+|||+........+ ++ + .....+.
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~---------------------G~---~-----~~~~~i~ 54 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAG---------------------GQ---L-----TTTTIIE 54 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTT---------------------CG---G-----GGSSEEC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccC---------------------CC---c-----CChHHhh
Confidence 48999999999999999999999999999999753111110 10 0 0000000
Q ss_pred ccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCC-ccEEeCceEEEEEecCCeEEEEEcCCcEEeccE
Q 024233 99 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGD-EIILNESNVIDFKDHGDKVSVVLENGQCYAGDL 177 (270)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~-~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~ad~ 177 (270)
. + .+++. .++..++.+.+.+.+.. ........+.....+.+...+.+.++.++++|.
T Consensus 55 ~------------~--------~g~~~--~i~~~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 112 (314)
T 4a5l_A 55 N------------F--------PGFPN--GIDGNELMMNMRTQSEKYGTTIITETIDHVDFSTQPFKLFTEEGKEVLTKS 112 (314)
T ss_dssp C------------S--------TTCTT--CEEHHHHHHHHHHHHHHTTCEEECCCEEEEECSSSSEEEEETTCCEEEEEE
T ss_pred h------------c--------cCCcc--cCCHHHHHHHHHHHHhhcCcEEEEeEEEEeecCCCceEEEECCCeEEEEeE
Confidence 0 0 01121 24556666666555321 123335567777777777788888899999999
Q ss_pred EEecCCCCc
Q 024233 178 LVGADGIWS 186 (270)
Q Consensus 178 vI~AdG~~S 186 (270)
||+|+|...
T Consensus 113 liiATG~~~ 121 (314)
T 4a5l_A 113 VIIATGATA 121 (314)
T ss_dssp EEECCCEEE
T ss_pred EEEcccccc
Confidence 999999654
No 96
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.23 E-value=5e-11 Score=99.47 Aligned_cols=111 Identities=15% Similarity=0.263 Sum_probs=76.6
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcccc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 98 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 98 (270)
++||+|||||++|+++|+.|+++|++|+|||+.. .| .... .. .+.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~-----gG-----~~~~--------~~-----------------~~~ 45 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGERF-----GG-----QILD--------TV-----------------DIE 45 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECSST-----TG-----GGGG--------CC-----------------EEC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC-----Cc-----eecc--------cc-----------------ccc
Confidence 3799999999999999999999999999998641 11 0000 00 000
Q ss_pred ccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhc---CCccEEeCceEEEEEecC---CeEEEEEcCCcE
Q 024233 99 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDHG---DKVSVVLENGQC 172 (270)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~---~~~~v~~~~g~~ 172 (270)
.+. +.+ ..++..+.+.+.+.+ +.. ++.+++|+.+..+. +.+.+.+.+|++
T Consensus 46 ~~~--------------------~~~---~~~~~~~~~~~~~~~~~~~v~-~~~~~~v~~i~~~~~~~~~~~v~~~~g~~ 101 (310)
T 1fl2_A 46 NYI--------------------SVP---KTEGQKLAGALKVHVDEYDVD-VIDSQSASKLIPAAVEGGLHQIETASGAV 101 (310)
T ss_dssp CBT--------------------TBS---SEEHHHHHHHHHHHHHTSCEE-EECSCCEEEEECCSSTTCCEEEEETTSCE
T ss_pred ccc--------------------CcC---CCCHHHHHHHHHHHHHHcCCe-EEccCEEEEEEecccCCceEEEEECCCCE
Confidence 000 000 124566766666554 333 88888999997653 368888888888
Q ss_pred EeccEEEecCCCCchh
Q 024233 173 YAGDLLVGADGIWSKV 188 (270)
Q Consensus 173 ~~ad~vI~AdG~~S~v 188 (270)
+++|.||+|+|.++..
T Consensus 102 ~~~~~lv~AtG~~~~~ 117 (310)
T 1fl2_A 102 LKARSIIVATGAKWRN 117 (310)
T ss_dssp EEEEEEEECCCEEECC
T ss_pred EEeCEEEECcCCCcCC
Confidence 9999999999987643
No 97
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.22 E-value=6.2e-11 Score=105.59 Aligned_cols=59 Identities=24% Similarity=0.387 Sum_probs=40.8
Q ss_pred HHHHHHHHh---cCCccEEeCceEEEEEecCCeEE-EEEcCCcEEeccEEEecCCCCchhhccc
Q 024233 133 TLQQILAKA---VGDEIILNESNVIDFKDHGDKVS-VVLENGQCYAGDLLVGADGIWSKVRKNL 192 (270)
Q Consensus 133 ~l~~~L~~~---~~~~~i~~~~~v~~i~~~~~~~~-v~~~~g~~~~ad~vI~AdG~~S~vr~~~ 192 (270)
.|.+.|.+. .|.+ |+.+++|++|..++++++ |.+++|+++.||.||.+.+.+...++.+
T Consensus 222 ~l~~aL~~~~~~~Gg~-I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll 284 (501)
T 4dgk_A 222 ALVQGMIKLFQDLGGE-VVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVHTYRDLL 284 (501)
T ss_dssp HHHHHHHHHHHHTTCE-EECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC---------
T ss_pred chHHHHHHHHHHhCCc-eeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHHHHHHHhc
Confidence 344444443 2444 999999999999999987 8899999999999999998888777655
No 98
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.22 E-value=5.9e-11 Score=100.29 Aligned_cols=113 Identities=22% Similarity=0.301 Sum_probs=75.2
Q ss_pred CCcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcc
Q 024233 17 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 96 (270)
Q Consensus 17 ~~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~ 96 (270)
+..+||+|||||++|+++|+.|+++|++|+|||+... | +.+.... .
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~-----g---g~~~~~~--------------------------~ 57 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTSF-----G---GALMTTT--------------------------D 57 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSSC-----S---CGGGSCS--------------------------C
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC-----C---Cceeccc--------------------------h
Confidence 3568999999999999999999999999999997521 1 0000000 0
Q ss_pred ccccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhc---CCccEEeCceEEEEEecCCeEEE-EEcCCcE
Q 024233 97 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDHGDKVSV-VLENGQC 172 (270)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~~~v-~~~~g~~ 172 (270)
.. .++ +.+ ..+.+.++.+.|.+.+ +.. ++.++ |+++.. ++.+.+ .+.++++
T Consensus 58 ~~------------~~~--------~~~--~~~~~~~~~~~l~~~~~~~~v~-~~~~~-v~~i~~-~~~~~v~~~~~g~~ 112 (335)
T 2a87_A 58 VE------------NYP--------GFR--NGITGPELMDEMREQALRFGAD-LRMED-VESVSL-HGPLKSVVTADGQT 112 (335)
T ss_dssp BC------------CST--------TCT--TCBCHHHHHHHHHHHHHHTTCE-EECCC-EEEEEC-SSSSEEEEETTSCE
T ss_pred hh------------hcC--------CCC--CCCCHHHHHHHHHHHHHHcCCE-EEEee-EEEEEe-CCcEEEEEeCCCCE
Confidence 00 000 011 1234556666665543 444 67675 888877 556677 7778889
Q ss_pred EeccEEEecCCCCchh
Q 024233 173 YAGDLLVGADGIWSKV 188 (270)
Q Consensus 173 ~~ad~vI~AdG~~S~v 188 (270)
+.+|.||+|+|.++..
T Consensus 113 ~~~d~lviAtG~~~~~ 128 (335)
T 2a87_A 113 HRARAVILAMGAAARY 128 (335)
T ss_dssp EEEEEEEECCCEEECC
T ss_pred EEeCEEEECCCCCccC
Confidence 9999999999987643
No 99
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.21 E-value=5.4e-11 Score=103.93 Aligned_cols=51 Identities=20% Similarity=0.353 Sum_probs=42.0
Q ss_pred HHHHHHHHhcCCccEEeCceEEEEEecCCeEEEEEcCCcEEeccEEEecCCCC
Q 024233 133 TLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLVGADGIW 185 (270)
Q Consensus 133 ~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~ad~vI~AdG~~ 185 (270)
.+.+.+.+..+ . |+++++|++|+.++++++|.+.+|++++||.||.|.|..
T Consensus 208 ~l~~~~~~~~g-~-i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vi~a~~~~ 258 (431)
T 3k7m_X 208 DLVDAMSQEIP-E-IRLQTVVTGIDQSGDVVNVTVKDGHAFQAHSVIVATPMN 258 (431)
T ss_dssp HHHHHHHTTCS-C-EESSCCEEEEECSSSSEEEEETTSCCEEEEEEEECSCGG
T ss_pred HHHHHHHhhCC-c-eEeCCEEEEEEEcCCeEEEEECCCCEEEeCEEEEecCcc
Confidence 44444455555 4 999999999999888999999999889999999999954
No 100
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.20 E-value=7e-11 Score=98.95 Aligned_cols=112 Identities=18% Similarity=0.286 Sum_probs=75.3
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCccc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 97 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~ 97 (270)
+.+||+|||||++|+++|+.|+++|++|+|||+... | +.+... . ..
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~-----g---g~~~~~---------------------~-----~~ 49 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEK-----G---GQLTTT---------------------T-----EV 49 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCSST-----T---GGGGGC---------------------S-----BC
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccCCC-----C---ceEecc---------------------h-----hh
Confidence 457999999999999999999999999999996521 1 000000 0 00
Q ss_pred cccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhc---CCccEEeCceEEEEEecCCeEEEEEcCCcEEe
Q 024233 98 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDHGDKVSVVLENGQCYA 174 (270)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~ 174 (270)
.. + .+.+ ..+.+..+.+.+.+.+ +.. ++.++ ++.+..+++.+.+ +.++.++.
T Consensus 50 ~~------------~--------~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~-v~~i~~~~~~~~v-~~~~~~~~ 104 (320)
T 1trb_A 50 EN------------W--------PGDP--NDLTGPLLMERMHEHATKFETE-IIFDH-INKVDLQNRPFRL-NGDNGEYT 104 (320)
T ss_dssp CC------------S--------TTCC--SSCBHHHHHHHHHHHHHHTTCE-EECCC-EEEEECSSSSEEE-EESSCEEE
T ss_pred hh------------C--------CCCC--CCCCHHHHHHHHHHHHHHCCCE-EEEee-eeEEEecCCEEEE-EeCCCEEE
Confidence 00 0 0001 1134556666655543 444 66665 8899888788887 67788999
Q ss_pred ccEEEecCCCCchh
Q 024233 175 GDLLVGADGIWSKV 188 (270)
Q Consensus 175 ad~vI~AdG~~S~v 188 (270)
+|.||+|+|.++..
T Consensus 105 ~~~lv~AtG~~~~~ 118 (320)
T 1trb_A 105 CDALIIATGASARY 118 (320)
T ss_dssp EEEEEECCCEEECC
T ss_pred cCEEEECCCCCcCC
Confidence 99999999987643
No 101
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.19 E-value=4.6e-11 Score=104.16 Aligned_cols=54 Identities=19% Similarity=0.315 Sum_probs=43.4
Q ss_pred HHHHHHHHHhc---CCccEEeCceEEEEEecCCeEEEEEcCCcEEeccEEEecCCCCchh
Q 024233 132 MTLQQILAKAV---GDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLVGADGIWSKV 188 (270)
Q Consensus 132 ~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~ad~vI~AdG~~S~v 188 (270)
..+.+.|.+.+ |.. |+.+++|++|..+++++ + ..+|++++||.||.|.|.+...
T Consensus 189 ~~l~~~l~~~~~~~G~~-i~~~~~V~~i~~~~~~v-V-~~~g~~~~ad~Vv~a~~~~~~~ 245 (421)
T 3nrn_A 189 KAVIDELERIIMENKGK-ILTRKEVVEINIEEKKV-Y-TRDNEEYSFDVAISNVGVRETV 245 (421)
T ss_dssp HHHHHHHHHHHHTTTCE-EESSCCEEEEETTTTEE-E-ETTCCEEECSEEEECSCHHHHH
T ss_pred HHHHHHHHHHHHHCCCE-EEcCCeEEEEEEECCEE-E-EeCCcEEEeCEEEECCCHHHHH
Confidence 45666666654 344 99999999999988888 5 5678899999999999988654
No 102
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.16 E-value=5.4e-10 Score=102.40 Aligned_cols=37 Identities=27% Similarity=0.437 Sum_probs=33.7
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhC------CCcEEEEeccCcc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRK------GFEVLVFEKDMSA 54 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~------g~~V~viE~~~~~ 54 (270)
..+||+|||||++||++|+.|+++ |.+|+||||....
T Consensus 21 ~~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~ 63 (662)
T 3gyx_A 21 HSVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLE 63 (662)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTT
T ss_pred EEcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCC
Confidence 358999999999999999999998 9999999998653
No 103
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.16 E-value=4.4e-11 Score=104.25 Aligned_cols=56 Identities=14% Similarity=0.208 Sum_probs=44.4
Q ss_pred HHHHHHHHHhc---CCccEEeCceEEEEEecCCeEE-EEEcCCcEEeccEEEecCCCCchhh
Q 024233 132 MTLQQILAKAV---GDEIILNESNVIDFKDHGDKVS-VVLENGQCYAGDLLVGADGIWSKVR 189 (270)
Q Consensus 132 ~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~~~-v~~~~g~~~~ad~vI~AdG~~S~vr 189 (270)
..+.+.|.+.+ +.. |+.+++|++|..++++++ |.+ +|++++||.||.|.|.+...+
T Consensus 196 ~~l~~~l~~~~~~~G~~-i~~~~~V~~i~~~~~~~~gv~~-~g~~~~ad~VV~a~~~~~~~~ 255 (425)
T 3ka7_A 196 KGIIDALETVISANGGK-IHTGQEVSKILIENGKAAGIIA-DDRIHDADLVISNLGHAATAV 255 (425)
T ss_dssp HHHHHHHHHHHHHTTCE-EECSCCEEEEEEETTEEEEEEE-TTEEEECSEEEECSCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCE-EEECCceeEEEEECCEEEEEEE-CCEEEECCEEEECCCHHHHHH
Confidence 45666666654 444 999999999999888887 555 578899999999999887653
No 104
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.14 E-value=9.7e-10 Score=100.75 Aligned_cols=36 Identities=33% Similarity=0.496 Sum_probs=33.1
Q ss_pred CcceEEEEcCCHHHHHHHHHHH---h-CCCcEEEEeccCc
Q 024233 18 KKLRILVAGGGIGGLVFALAAK---R-KGFEVLVFEKDMS 53 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La---~-~g~~V~viE~~~~ 53 (270)
..+||+|||||++||++|+.|+ + +|.+|+||||.+.
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~ 60 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAV 60 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCT
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCC
Confidence 4589999999999999999999 6 8999999999864
No 105
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.13 E-value=2.1e-10 Score=102.75 Aligned_cols=55 Identities=18% Similarity=0.160 Sum_probs=46.1
Q ss_pred HHHHHHHHHhcCCccEEeCceEEEEEecCCeEEEEEcCCcEEeccEEEecCCCCch
Q 024233 132 MTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLVGADGIWSK 187 (270)
Q Consensus 132 ~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~ad~vI~AdG~~S~ 187 (270)
..|.+.|.+.++.. |+.+++|++|..+++++.|.+.+|++++||.||.|.+.+..
T Consensus 215 ~~l~~~l~~~lg~~-i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~l 269 (520)
T 1s3e_A 215 GQVSERIMDLLGDR-VKLERPVIYIDQTRENVLVETLNHEMYEAKYVISAIPPTLG 269 (520)
T ss_dssp HHHHHHHHHHHGGG-EESSCCEEEEECSSSSEEEEETTSCEEEESEEEECSCGGGG
T ss_pred HHHHHHHHHHcCCc-EEcCCeeEEEEECCCeEEEEECCCeEEEeCEEEECCCHHHH
Confidence 45566666666655 99999999999988889999999999999999999998763
No 106
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.13 E-value=6.2e-11 Score=104.92 Aligned_cols=56 Identities=13% Similarity=0.083 Sum_probs=45.9
Q ss_pred HHHHHHHHhcCCccEEeCceEEEEEecCCeEEEEEcCCcEEeccEEEecCCCCchhh
Q 024233 133 TLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLVGADGIWSKVR 189 (270)
Q Consensus 133 ~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~ad~vI~AdG~~S~vr 189 (270)
.|.+.|.+.++...|+.+++|++|..+++++.|++.+| +++||.||.|.+.+...+
T Consensus 237 ~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~ad~vV~a~p~~~~~~ 292 (475)
T 3lov_A 237 SLIERLEEVLERSEIRLETPLLAISREDGRYRLKTDHG-PEYADYVLLTIPHPQVVQ 292 (475)
T ss_dssp HHHHHHHHHCSSCEEESSCCCCEEEEETTEEEEECTTC-CEEESEEEECSCHHHHHH
T ss_pred HHHHHHHhhccCCEEEcCCeeeEEEEeCCEEEEEECCC-eEECCEEEECCCHHHHHH
Confidence 46667777765334999999999999999999999888 899999999999765433
No 107
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.11 E-value=5.5e-11 Score=96.65 Aligned_cols=36 Identities=33% Similarity=0.517 Sum_probs=33.5
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCcc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSA 54 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~ 54 (270)
++||+||||||+||++|+.|+++|++|+||||.+.+
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGS 37 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 479999999999999999999999999999998643
No 108
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.09 E-value=4.7e-10 Score=100.44 Aligned_cols=112 Identities=17% Similarity=0.321 Sum_probs=77.2
Q ss_pred CCcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcc
Q 024233 17 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 96 (270)
Q Consensus 17 ~~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~ 96 (270)
+..+||+|||||++|+++|+.|+++|++|+|+|+.. .| .+ .. .. +
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~-----GG----~~-~~--------~~--~--------------- 254 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERF-----GG----QV-LD--------TV--D--------------- 254 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSST-----TG----GG-TT--------CS--C---------------
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCCCeEEEEECCC-----CC----cc-cc--------cc--c---------------
Confidence 456899999999999999999999999999998642 11 00 00 00 0
Q ss_pred ccccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhc---CCccEEeCceEEEEEec---CCeEEEEEcCC
Q 024233 97 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDH---GDKVSVVLENG 170 (270)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~---~~~~i~~~~~v~~i~~~---~~~~~v~~~~g 170 (270)
+..+. +.+ ...+..+.+.|.+.+ +.. ++.+++|+.+..+ ++.+.+.+.+|
T Consensus 255 ~~~~~--------------------~~~---~~~~~~l~~~l~~~~~~~gv~-v~~~~~v~~i~~~~~~~~~~~V~~~~g 310 (521)
T 1hyu_A 255 IENYI--------------------SVP---KTEGQKLAGALKAHVSDYDVD-VIDSQSASKLVPAATEGGLHQIETASG 310 (521)
T ss_dssp BCCBT--------------------TBS---SBCHHHHHHHHHHHHHTSCEE-EECSCCEEEEECCSSTTSCEEEEETTS
T ss_pred ccccC--------------------CCC---CCCHHHHHHHHHHHHHHcCCE-EEcCCEEEEEEeccCCCceEEEEECCC
Confidence 00000 000 124556666665553 334 8889999999754 33688888889
Q ss_pred cEEeccEEEecCCCCch
Q 024233 171 QCYAGDLLVGADGIWSK 187 (270)
Q Consensus 171 ~~~~ad~vI~AdG~~S~ 187 (270)
.++++|.||+|+|.++.
T Consensus 311 ~~~~~d~vVlAtG~~~~ 327 (521)
T 1hyu_A 311 AVLKARSIIIATGAKWR 327 (521)
T ss_dssp CEEEEEEEEECCCEEEC
T ss_pred CEEEcCEEEECCCCCcC
Confidence 89999999999998654
No 109
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.09 E-value=1.5e-09 Score=94.56 Aligned_cols=54 Identities=11% Similarity=0.072 Sum_probs=42.9
Q ss_pred HHHHHHHHHhcCCccEEeCceEEEEEecCCeEEEEEcCCcEEeccEEEecCCCCch
Q 024233 132 MTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLVGADGIWSK 187 (270)
Q Consensus 132 ~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~ad~vI~AdG~~S~ 187 (270)
..+.+.|.+.++.. ++.+++|++|..+++++.|.+.+|+ ++||.||.|.+.+..
T Consensus 206 ~~l~~~l~~~l~~~-v~~~~~V~~i~~~~~~v~v~~~~g~-~~ad~Vv~a~~~~~~ 259 (424)
T 2b9w_A 206 QAMFEHLNATLEHP-AERNVDITRITREDGKVHIHTTDWD-RESDVLVLTVPLEKF 259 (424)
T ss_dssp HHHHHHHHHHSSSC-CBCSCCEEEEECCTTCEEEEESSCE-EEESEEEECSCHHHH
T ss_pred HHHHHHHHHhhcce-EEcCCEEEEEEEECCEEEEEECCCe-EEcCEEEECCCHHHH
Confidence 44555555556554 8889999999998888988888875 999999999998644
No 110
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.09 E-value=1.9e-10 Score=96.15 Aligned_cols=35 Identities=23% Similarity=0.473 Sum_probs=33.0
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
.+|||+||||||+|+++|+.|+++|++|+|||+..
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~ 39 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGI 39 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 56999999999999999999999999999999863
No 111
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.08 E-value=6.1e-10 Score=98.33 Aligned_cols=139 Identities=14% Similarity=0.138 Sum_probs=76.5
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeec---hhHHHHHHHcCcChHHHHHHhccccCc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQ---SNALAALEAIDLDVAEEVMRAGCVTGD 95 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~---~~~~~~l~~~~~~~~~~l~~~~~~~~~ 95 (270)
++||+|||||++|+++|+.|+++|++|+|||+... | +.++. ..+..++... ++++.+...... .
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~-----g----G~~~~~g~~psk~ll~~~--~~~~~~~~~~~~--~ 69 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKYW-----G----GVCLNVGCIPSKALLRNA--ELVHIFTKDAKA--F 69 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCT-----T----HHHHHHSHHHHHHHHHHH--HHHHHHHHHTTT--T
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC-----C----CcccccCchhhHHHHHHH--HHHHHHHHHHHh--c
Confidence 47999999999999999999999999999999731 1 11111 1233344433 444444311110 0
Q ss_pred cccccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHh---cCCccEEeCceEEEEEecCCeEEEEEcCC--
Q 024233 96 RINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKA---VGDEIILNESNVIDFKDHGDKVSVVLENG-- 170 (270)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~---~~~~~i~~~~~v~~i~~~~~~~~v~~~~g-- 170 (270)
. +.. . ....+...... . . .. ...+.+.+.+. .+.. ++.++.+. .+++.+.+.+.+|
T Consensus 70 g---~~~--~--~~~~~~~~~~~--~--~--~~--~~~l~~~l~~~~~~~gv~-~~~g~~~~---id~~~v~V~~~~G~~ 130 (464)
T 2a8x_A 70 G---ISG--E--VTFDYGIAYDR--S--R--KV--AEGRVAGVHFLMKKNKIT-EIHGYGTF---ADANTLLVDLNDGGT 130 (464)
T ss_dssp T---EEE--C--CEECHHHHHHH--H--H--HH--HHHHHHHHHHHHHHTTCE-EECEEEEE---SSSSEEEEEETTSCC
T ss_pred C---CCC--C--CccCHHHHHHH--H--H--HH--HHHHHHHHHHHHHhCCCE-EEEeEEEE---ecCCeEEEEeCCCce
Confidence 0 000 0 00000000000 0 0 00 01222223322 2334 66665543 3567788888888
Q ss_pred cEEeccEEEecCCCCchhh
Q 024233 171 QCYAGDLLVGADGIWSKVR 189 (270)
Q Consensus 171 ~~~~ad~vI~AdG~~S~vr 189 (270)
.++.+|.||+|+|.++...
T Consensus 131 ~~~~~d~lViAtG~~~~~~ 149 (464)
T 2a8x_A 131 ESVTFDNAIIATGSSTRLV 149 (464)
T ss_dssp EEEEEEEEEECCCEEECCC
T ss_pred EEEEcCEEEECCCCCCCCC
Confidence 6899999999999987544
No 112
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.08 E-value=3.6e-10 Score=99.99 Aligned_cols=53 Identities=19% Similarity=0.171 Sum_probs=40.1
Q ss_pred HHHHHHHHhc---CCccEEeCceEEEEEecCCe-EEEEEcCCcEEeccEEEecCCCCch
Q 024233 133 TLQQILAKAV---GDEIILNESNVIDFKDHGDK-VSVVLENGQCYAGDLLVGADGIWSK 187 (270)
Q Consensus 133 ~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~-~~v~~~~g~~~~ad~vI~AdG~~S~ 187 (270)
.|.+.|.+.+ +.. |+.+++|++|+.++++ +.|.+ ++++++||.||.|.+.+..
T Consensus 235 ~l~~~l~~~l~~~g~~-i~~~~~V~~i~~~~~~~~~v~~-~~~~~~ad~vv~a~p~~~~ 291 (477)
T 3nks_A 235 MLPQALETHLTSRGVS-VLRGQPVCGLSLQAEGRWKVSL-RDSSLEADHVISAIPASVL 291 (477)
T ss_dssp HHHHHHHHHHHHTTCE-EECSCCCCEEEECGGGCEEEEC-SSCEEEESEEEECSCHHHH
T ss_pred HHHHHHHHHHHhcCCE-EEeCCEEEEEEEcCCceEEEEE-CCeEEEcCEEEECCCHHHH
Confidence 3555555554 334 9999999999987776 77766 4558999999999987654
No 113
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.08 E-value=8.1e-10 Score=98.07 Aligned_cols=46 Identities=28% Similarity=0.338 Sum_probs=39.9
Q ss_pred CCccEEeCceEEEEEecCCeEEEEEcCCcEEeccEEEecCCCCchhh
Q 024233 143 GDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLVGADGIWSKVR 189 (270)
Q Consensus 143 ~~~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~ad~vI~AdG~~S~vr 189 (270)
+.. ++.+++|++++.+++++.+.+.+|+++.+|.||.|.|..+...
T Consensus 246 Gv~-i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~~p~~~ 291 (484)
T 3o0h_A 246 GIS-IIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGRVPNTT 291 (484)
T ss_dssp TCE-EESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECCT
T ss_pred CCE-EEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCCCcCCC
Confidence 444 8889999999998888899999998999999999999876543
No 114
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.07 E-value=8.5e-10 Score=97.77 Aligned_cols=35 Identities=34% Similarity=0.537 Sum_probs=32.6
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
.++||+|||||++|+++|+.|+++|++|+|||+.+
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~ 38 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRG 38 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 35899999999999999999999999999999964
No 115
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.06 E-value=8.6e-10 Score=98.67 Aligned_cols=57 Identities=16% Similarity=0.149 Sum_probs=45.0
Q ss_pred HHHHHHHHHHhcCCccEEeCceEEEEEec-CCeEEEEEcCCcEEeccEEEecCCCCch
Q 024233 131 RMTLQQILAKAVGDEIILNESNVIDFKDH-GDKVSVVLENGQCYAGDLLVGADGIWSK 187 (270)
Q Consensus 131 ~~~l~~~L~~~~~~~~i~~~~~v~~i~~~-~~~~~v~~~~g~~~~ad~vI~AdG~~S~ 187 (270)
-..|.+.|.+.++...|+++++|++|..+ ++++.|.+.+|++++||.||.|.+....
T Consensus 201 ~~~l~~~l~~~l~~~~i~~~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~p~~~l 258 (516)
T 1rsg_A 201 YDSVVQRIAQSFPQNWLKLSCEVKSITREPSKNVTVNCEDGTVYNADYVIITVPQSVL 258 (516)
T ss_dssp HHHHHHHHHTTSCGGGEETTCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCCHHHH
T ss_pred HHHHHHHHHHhCCCCEEEECCEEEEEEEcCCCeEEEEECCCcEEECCEEEECCCHHHh
Confidence 44555556666654459999999999986 6779999999989999999999987544
No 116
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.01 E-value=1.7e-09 Score=95.59 Aligned_cols=36 Identities=33% Similarity=0.574 Sum_probs=33.4
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
.++||+|||||++|+++|+.|++.|++|+|||+.+.
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~ 40 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGA 40 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 458999999999999999999999999999999853
No 117
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.01 E-value=9.4e-10 Score=97.61 Aligned_cols=34 Identities=35% Similarity=0.609 Sum_probs=32.3
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
++||+|||||++|+++|+.|++.|++|+|||+.+
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~ 39 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYK 39 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 5899999999999999999999999999999964
No 118
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.00 E-value=1.3e-09 Score=101.45 Aligned_cols=50 Identities=24% Similarity=0.274 Sum_probs=41.0
Q ss_pred HHHHHHHHhcCCccEEeCceEEEEEecCCeEEEEEcCCcEEeccEEEecCCCC
Q 024233 133 TLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLVGADGIW 185 (270)
Q Consensus 133 ~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~ad~vI~AdG~~ 185 (270)
.+.+.|.+ +.. |+++++|++|..+++++.|.+.+|++++||.||.|....
T Consensus 535 ~l~~aLa~--gl~-I~l~t~V~~I~~~~~~v~V~~~~G~~i~Ad~VIvA~P~~ 584 (776)
T 4gut_A 535 VIIEKLAE--GLD-IQLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVPLA 584 (776)
T ss_dssp HHHHHHHT--TSC-EESSCCEEEEECSSSSEEEEETTCCEEEESEEEECCCHH
T ss_pred HHHHHHHh--CCc-EEcCCeeEEEEEcCCEEEEEECCCcEEEcCEEEECCCHH
Confidence 44454544 234 999999999999999999999999899999999999753
No 119
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.00 E-value=1.8e-09 Score=96.07 Aligned_cols=55 Identities=9% Similarity=0.049 Sum_probs=43.5
Q ss_pred HHHHHHHHhcCCc---cEEeCceEEEEEecCCeEEEEEcCCcEEeccEEEecCCCCch
Q 024233 133 TLQQILAKAVGDE---IILNESNVIDFKDHGDKVSVVLENGQCYAGDLLVGADGIWSK 187 (270)
Q Consensus 133 ~l~~~L~~~~~~~---~i~~~~~v~~i~~~~~~~~v~~~~g~~~~ad~vI~AdG~~S~ 187 (270)
.+.+.|.+.+... .|+++++|++|+.+++++.|.+.+|++++||.||.|.|....
T Consensus 256 ~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~l 313 (495)
T 2vvm_A 256 AFARRFWEEAAGTGRLGYVFGCPVRSVVNERDAARVTARDGREFVAKRVVCTIPLNVL 313 (495)
T ss_dssp HHHHHHHHHHHTTTCEEEESSCCEEEEEECSSSEEEEETTCCEEEEEEEEECCCGGGG
T ss_pred HHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHHHH
Confidence 4555555554222 289999999999888889999999988999999999997654
No 120
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.99 E-value=8.6e-10 Score=96.94 Aligned_cols=53 Identities=13% Similarity=0.031 Sum_probs=43.0
Q ss_pred HHHHHHHHHhcCCccEEeCceEEEEEecCCe-EEEEEcCCcEEeccEEEecCCCCc
Q 024233 132 MTLQQILAKAVGDEIILNESNVIDFKDHGDK-VSVVLENGQCYAGDLLVGADGIWS 186 (270)
Q Consensus 132 ~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~-~~v~~~~g~~~~ad~vI~AdG~~S 186 (270)
..|.+.|.+.++.. |+.+++|++|..++++ +.|.+ ++++++||.||.|.+.+.
T Consensus 215 ~~l~~~l~~~lg~~-i~~~~~V~~i~~~~~~~v~v~~-~~~~~~ad~VI~a~p~~~ 268 (453)
T 2yg5_A 215 QQVSIRMAEALGDD-VFLNAPVRTVKWNESGATVLAD-GDIRVEASRVILAVPPNL 268 (453)
T ss_dssp HHHHHHHHHHHGGG-EECSCCEEEEEEETTEEEEEET-TTEEEEEEEEEECSCGGG
T ss_pred HHHHHHHHHhcCCc-EEcCCceEEEEEeCCceEEEEE-CCeEEEcCEEEEcCCHHH
Confidence 35566666666655 9999999999998888 88775 677899999999999863
No 121
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.99 E-value=5e-09 Score=87.25 Aligned_cols=111 Identities=23% Similarity=0.312 Sum_probs=72.1
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEE-EeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLV-FEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 96 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~v-iE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~ 96 (270)
..+||+|||||++|+++|+.|+++|++|+| +|+... .| .+... ..
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~~~----gG----~~~~~--------------------------~~ 48 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGMP----GG----QITSS--------------------------SE 48 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSSST----TG----GGGGC--------------------------SC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCCC----Cc----eeeee--------------------------ce
Confidence 457999999999999999999999999999 999421 11 00000 00
Q ss_pred ccccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCc--cEEeCceEEEEEecC--CeEEEEEcCCcE
Q 024233 97 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDE--IILNESNVIDFKDHG--DKVSVVLENGQC 172 (270)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~--~i~~~~~v~~i~~~~--~~~~v~~~~g~~ 172 (270)
+.. .. +.+ ..+.+.++.+.+.+.+... .++.+ +|+++ .++ +.+.+....+.+
T Consensus 49 ~~~----~~----------------~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i-~~~~~~~~~v~~~~~~~ 104 (315)
T 3r9u_A 49 IEN----YP----------------GVA--QVMDGISFMAPWSEQCMRFGLKHEMV-GVEQI-LKNSDGSFTIKLEGGKT 104 (315)
T ss_dssp BCC----ST----------------TCC--SCBCHHHHHHHHHHHHTTTCCEEECC-CEEEE-EECTTSCEEEEETTSCE
T ss_pred ecc----CC----------------CCC--CCCCHHHHHHHHHHHHHHcCcEEEEE-EEEEE-ecCCCCcEEEEEecCCE
Confidence 000 00 000 1235667777776664321 26666 89999 766 677753332228
Q ss_pred EeccEEEecCCCCc
Q 024233 173 YAGDLLVGADGIWS 186 (270)
Q Consensus 173 ~~ad~vI~AdG~~S 186 (270)
+.+|.||.|+|...
T Consensus 105 ~~~d~lvlAtG~~~ 118 (315)
T 3r9u_A 105 ELAKAVIVCTGSAP 118 (315)
T ss_dssp EEEEEEEECCCEEE
T ss_pred EEeCEEEEeeCCCC
Confidence 99999999999743
No 122
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.94 E-value=6.3e-09 Score=92.25 Aligned_cols=113 Identities=17% Similarity=0.188 Sum_probs=71.0
Q ss_pred cceEEEEcCCHHHHHHHHHHHhC--CCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 96 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~--g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~ 96 (270)
.+||+|||||++|+++|+.|++. |.+|+|||+.+.... .+. ++...+ .+.
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~-----------~~~----------~~~~~~--~~~----- 87 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSY-----------AQC----------GLPYVI--SGA----- 87 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSB-----------CGG----------GHHHHH--TTS-----
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCC-----------CCC----------Ccchhh--cCC-----
Confidence 36999999999999999999996 899999999853210 000 000000 000
Q ss_pred ccccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCeEEEEE-cCCc--EE
Q 024233 97 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVL-ENGQ--CY 173 (270)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~~-~~g~--~~ 173 (270)
. .... . . +. ...+.+.+..+.. ++.+++|+.+..+++.+.+.. .+|+ ++
T Consensus 88 ~------~~~~------~------l-------~~--~~~~~~~~~~gv~-~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~ 139 (480)
T 3cgb_A 88 I------ASTE------K------L-------IA--RNVKTFRDKYGID-AKVRHEVTKVDTEKKIVYAEHTKTKDVFEF 139 (480)
T ss_dssp S------SCGG------G------G-------BS--SCHHHHHHTTCCE-EESSEEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred c------CCHH------H------h-------hh--cCHHHHHhhcCCE-EEeCCEEEEEECCCCEEEEEEcCCCceEEE
Confidence 0 0000 0 0 00 0012233333555 788899999988888777766 4566 79
Q ss_pred eccEEEecCCCCch
Q 024233 174 AGDLLVGADGIWSK 187 (270)
Q Consensus 174 ~ad~vI~AdG~~S~ 187 (270)
.+|.||+|+|....
T Consensus 140 ~~d~lviAtG~~p~ 153 (480)
T 3cgb_A 140 SYDRLLIATGVRPV 153 (480)
T ss_dssp ECSEEEECCCEEEC
T ss_pred EcCEEEECCCCccc
Confidence 99999999997554
No 123
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.93 E-value=7.2e-09 Score=92.72 Aligned_cols=37 Identities=30% Similarity=0.487 Sum_probs=33.9
Q ss_pred CCcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 17 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 17 ~~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
+..+||+|||||++|+++|+.|++.|++|+|||+.+.
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~ 66 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTP 66 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCc
Confidence 3568999999999999999999999999999999753
No 124
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.93 E-value=1e-08 Score=91.08 Aligned_cols=36 Identities=36% Similarity=0.529 Sum_probs=31.9
Q ss_pred CCcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 17 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 17 ~~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
++++||+|||||++|+++|+.|+++|++|+|||+.+
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~ 58 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRS 58 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 456899999999999999999999999999999874
No 125
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.92 E-value=5.6e-09 Score=92.81 Aligned_cols=35 Identities=20% Similarity=0.268 Sum_probs=32.6
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCC---CcEEEEeccC
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKG---FEVLVFEKDM 52 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g---~~V~viE~~~ 52 (270)
+++||+|||||++|+++|..|++.| .+|+|||+.+
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~ 71 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNS 71 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSS
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCC
Confidence 4589999999999999999999988 9999999985
No 126
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.91 E-value=3.9e-09 Score=93.35 Aligned_cols=35 Identities=20% Similarity=0.106 Sum_probs=31.0
Q ss_pred cceEEEEcCCHHHHHHHHHHHhC--CCcEEEEeccCc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMS 53 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~--g~~V~viE~~~~ 53 (270)
++||+|||||++|+++|+.|+++ |++|+|||+.+.
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~ 39 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASR 39 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC--
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCc
Confidence 46999999999999999999998 899999999864
No 127
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.91 E-value=8.3e-09 Score=93.76 Aligned_cols=114 Identities=18% Similarity=0.166 Sum_probs=72.7
Q ss_pred CCcceEEEEcCCHHHHHHHHHHHhC--CCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccC
Q 024233 17 NKKLRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTG 94 (270)
Q Consensus 17 ~~~~dV~IIGgG~aGl~~A~~La~~--g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~ 94 (270)
+.++||+|||||++|+++|+.|+++ |.+|+|||+.+... ..+. ++...+...
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~-----------~~~~----------~lp~~~~g~----- 87 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYIS-----------FANC----------GLPYYIGGV----- 87 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSS-----------BCGG----------GHHHHHTTS-----
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCcc-----------ccCC----------CCchhhcCc-----
Confidence 4457999999999999999999998 89999999986421 1111 111100000
Q ss_pred ccccccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCeEEEEE-cCCc--
Q 024233 95 DRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVL-ENGQ-- 171 (270)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~~-~~g~-- 171 (270)
. . ... ... . ...+.+.+..+.. ++++++|+++..+++.+.+.. .+|+
T Consensus 88 --~----~--~~~-----------~~~------~----~~~~~~~~~~gi~-v~~~~~V~~id~~~~~v~v~~~~~g~~~ 137 (588)
T 3ics_A 88 --I----T--ERQ-----------KLL------V----QTVERMSKRFNLD-IRVLSEVVKINKEEKTITIKNVTTNETY 137 (588)
T ss_dssp --S----C--CGG-----------GGB------S----SCHHHHHHHTTCE-EECSEEEEEEETTTTEEEEEETTTCCEE
T ss_pred --C----C--ChH-----------Hhh------c----cCHHHHHHhcCcE-EEECCEEEEEECCCCEEEEeecCCCCEE
Confidence 0 0 000 000 0 0012223334555 788999999998888887765 4565
Q ss_pred EEeccEEEecCCCCc
Q 024233 172 CYAGDLLVGADGIWS 186 (270)
Q Consensus 172 ~~~ad~vI~AdG~~S 186 (270)
++.+|.||+|+|...
T Consensus 138 ~~~~d~lviAtG~~p 152 (588)
T 3ics_A 138 NEAYDVLILSPGAKP 152 (588)
T ss_dssp EEECSEEEECCCEEE
T ss_pred EEeCCEEEECCCCCC
Confidence 789999999999643
No 128
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.91 E-value=3.8e-09 Score=92.33 Aligned_cols=111 Identities=16% Similarity=0.256 Sum_probs=69.6
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCC--cEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 96 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~--~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~ 96 (270)
++||+|||||++|+++|..|+++|+ +|+|||+.+..... . +. +. ..
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~---------~-~~-----------l~-----------~~ 51 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHH---------L-PP-----------LS-----------KA 51 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBC---------S-GG-----------GG-----------TT
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCc---------C-CC-----------Cc-----------HH
Confidence 5799999999999999999999998 79999987531100 0 00 00 00
Q ss_pred ccccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCeEEEEEcCCcEEecc
Q 024233 97 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGD 176 (270)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~ad 176 (270)
+...... . ..... . +.+.+ +..+.. ++.+++|+.+..++. .+.+.+|+++.+|
T Consensus 52 ---~~~~~~~-----~------~~~~~------~---~~~~~-~~~gv~-~~~~~~v~~i~~~~~--~v~~~~g~~~~~d 104 (431)
T 1q1r_A 52 ---YLAGKAT-----A------ESLYL------R---TPDAY-AAQNIQ-LLGGTQVTAINRDRQ--QVILSDGRALDYD 104 (431)
T ss_dssp ---TTTTCSC-----S------GGGBS------S---CHHHH-HHTTEE-EECSCCEEEEETTTT--EEEETTSCEEECS
T ss_pred ---HhCCCCC-----h------HHhcc------c---CHHHH-HhCCCE-EEeCCEEEEEECCCC--EEEECCCCEEECC
Confidence 0000000 0 00000 0 01112 233444 788999999987655 4566788899999
Q ss_pred EEEecCCCCchh
Q 024233 177 LLVGADGIWSKV 188 (270)
Q Consensus 177 ~vI~AdG~~S~v 188 (270)
.||+|+|..+..
T Consensus 105 ~lviAtG~~p~~ 116 (431)
T 1q1r_A 105 RLVLATGGRPRP 116 (431)
T ss_dssp EEEECCCEEECC
T ss_pred EEEEcCCCCccC
Confidence 999999986643
No 129
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.90 E-value=1.1e-08 Score=90.44 Aligned_cols=36 Identities=31% Similarity=0.552 Sum_probs=33.6
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
.++||+|||||++|+++|+.|+++|++|+|||+.+.
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~ 37 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKG 37 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCc
Confidence 468999999999999999999999999999999863
No 130
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.89 E-value=7.3e-09 Score=91.16 Aligned_cols=33 Identities=39% Similarity=0.566 Sum_probs=31.8
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEecc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 51 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~ 51 (270)
++||+|||||++|+++|..|++.|++|+|||+.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 35 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG 35 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 479999999999999999999999999999997
No 131
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.89 E-value=3.5e-09 Score=94.34 Aligned_cols=59 Identities=14% Similarity=0.106 Sum_probs=44.7
Q ss_pred EEeHHHHHHHHHHhcCC--ccEEeCceEEEEEecC--------CeEEEEEcCC-----cEEeccEEEecCCCCc
Q 024233 128 VISRMTLQQILAKAVGD--EIILNESNVIDFKDHG--------DKVSVVLENG-----QCYAGDLLVGADGIWS 186 (270)
Q Consensus 128 ~i~~~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~--------~~~~v~~~~g-----~~~~ad~vI~AdG~~S 186 (270)
...|.++.+.|...+.. ..++++++|++++..+ +.|+|+..++ +++.|+.||.|+|...
T Consensus 141 ~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~~P 214 (501)
T 4b63_A 141 LPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGGTA 214 (501)
T ss_dssp CCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCCEE
T ss_pred CCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCCCC
Confidence 45789999988776532 2499999999998743 2478887654 3689999999999643
No 132
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.88 E-value=1.1e-08 Score=90.61 Aligned_cols=35 Identities=34% Similarity=0.547 Sum_probs=33.1
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
..+||+|||||++|+++|..|+++|++|+|||+.+
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 39 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNE 39 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 45899999999999999999999999999999985
No 133
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.87 E-value=7.2e-09 Score=91.15 Aligned_cols=111 Identities=23% Similarity=0.309 Sum_probs=69.0
Q ss_pred ceEEEEcCCHHHHHHHHHHHhC--CCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCccc
Q 024233 20 LRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 97 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~--g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~ 97 (270)
+||+|||||++|+++|+.|+++ |.+|+|||+.+..... +.....+ + .....
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~-----------~~~~~~~--~----~~~~~---------- 55 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYL-----------SGGLSAY--F----NHTIN---------- 55 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSC-----------CC---------------------------
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCccc-----------Cccchhh--h----cCCCC----------
Confidence 5999999999999999999998 8999999998632100 0000000 0 00000
Q ss_pred cccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCeEEEEE-cCCcEEecc
Q 024233 98 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVL-ENGQCYAGD 176 (270)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~~-~~g~~~~ad 176 (270)
. .. .. ....+..+ ...+.. ++.+++|+++..+++.+.+.. .++.++.+|
T Consensus 56 -------~------~~------~~-----~~~~~~~~-----~~~gi~-~~~~~~V~~id~~~~~v~v~~~~~~~~~~~d 105 (452)
T 3oc4_A 56 -------E------LH------EA-----RYITEEEL-----RRQKIQ-LLLNREVVAMDVENQLIAWTRKEEQQWYSYD 105 (452)
T ss_dssp -----------------------------CCCCHHHH-----HHTTEE-EECSCEEEEEETTTTEEEEEETTEEEEEECS
T ss_pred -------C------HH------Hh-----hcCCHHHH-----HHCCCE-EEECCEEEEEECCCCEEEEEecCceEEEEcC
Confidence 0 00 00 00011122 223444 778999999998888877752 245689999
Q ss_pred EEEecCCCCch
Q 024233 177 LLVGADGIWSK 187 (270)
Q Consensus 177 ~vI~AdG~~S~ 187 (270)
.+|+|+|....
T Consensus 106 ~lviAtG~~p~ 116 (452)
T 3oc4_A 106 KLILATGASQF 116 (452)
T ss_dssp EEEECCCCCBC
T ss_pred EEEECCCcccC
Confidence 99999998543
No 134
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.86 E-value=2.1e-08 Score=86.28 Aligned_cols=108 Identities=18% Similarity=0.178 Sum_probs=69.5
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCccc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 97 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~ 97 (270)
++.+|+|||||++|+++|..|++.+.+|+|||+.+... + ..+ .+...+. ... ....+
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~---------y-~~~-----------~l~~~l~-g~~-~~~~l 64 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLP---------Y-YRP-----------RLNEIIA-KNK-SIDDI 64 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCC---------B-CGG-----------GHHHHHH-SCC-CGGGT
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCC---------c-ccC-----------hhhHHHc-CCC-CHHHc
Confidence 44699999999999999999988899999999986421 0 011 1111110 000 00000
Q ss_pred cccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCeEEEEEcCCcEEeccE
Q 024233 98 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDL 177 (270)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~ad~ 177 (270)
. .. .... .+..+.. ++.+++|+++..++. .+.+++|+++.+|.
T Consensus 65 ---~---------------------~~-----~~~~-----~~~~~i~-~~~~~~V~~id~~~~--~v~~~~g~~~~yd~ 107 (385)
T 3klj_A 65 ---L---------------------IK-----KNDW-----YEKNNIK-VITSEFATSIDPNNK--LVTLKSGEKIKYEK 107 (385)
T ss_dssp ---B---------------------SS-----CHHH-----HHHTTCE-EECSCCEEEEETTTT--EEEETTSCEEECSE
T ss_pred ---c---------------------CC-----CHHH-----HHHCCCE-EEeCCEEEEEECCCC--EEEECCCCEEECCE
Confidence 0 00 0111 1223444 888999999987665 46678899999999
Q ss_pred EEecCCCC
Q 024233 178 LVGADGIW 185 (270)
Q Consensus 178 vI~AdG~~ 185 (270)
||+|+|..
T Consensus 108 lvlAtG~~ 115 (385)
T 3klj_A 108 LIIASGSI 115 (385)
T ss_dssp EEECCCEE
T ss_pred EEEecCCC
Confidence 99999963
No 135
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.85 E-value=3.2e-08 Score=85.94 Aligned_cols=107 Identities=18% Similarity=0.275 Sum_probs=68.2
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCCc--EEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCccc
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGFE--VLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 97 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~~--V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~ 97 (270)
++|+|||||++|+++|..|+++|++ |+|||+.+..... ..+ +...+.....
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~---------~~~------------l~~~~~~g~~------ 55 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYD---------RPS------------LSKAVLDGSL------ 55 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBC---------SGG------------GGTHHHHTSS------
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcC---------Ccc------------ccHHHhCCCC------
Confidence 5999999999999999999999987 9999998642100 000 1011110000
Q ss_pred cccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCeEEEEEcCCcEEeccE
Q 024233 98 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDL 177 (270)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~ad~ 177 (270)
....+ .. .... .+..+.. ++.+++|+.+..+.. .+.+.+|+++.+|.
T Consensus 56 -------~~~~~--~~----------------~~~~-----~~~~~i~-~~~~~~v~~id~~~~--~v~~~~g~~~~~d~ 102 (410)
T 3ef6_A 56 -------ERPPI--LA----------------EADW-----YGEARID-MLTGPEVTALDVQTR--TISLDDGTTLSADA 102 (410)
T ss_dssp -------SSCCB--SS----------------CTTH-----HHHTTCE-EEESCCEEEEETTTT--EEEETTSCEEECSE
T ss_pred -------CHHHh--cC----------------CHHH-----HHHCCCE-EEeCCEEEEEECCCC--EEEECCCCEEECCE
Confidence 00000 00 0000 1223444 888999999976654 56678888999999
Q ss_pred EEecCCCCc
Q 024233 178 LVGADGIWS 186 (270)
Q Consensus 178 vI~AdG~~S 186 (270)
||+|+|...
T Consensus 103 lvlAtG~~p 111 (410)
T 3ef6_A 103 IVIATGSRA 111 (410)
T ss_dssp EEECCCEEE
T ss_pred EEEccCCcc
Confidence 999999653
No 136
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.85 E-value=1.9e-08 Score=88.79 Aligned_cols=34 Identities=24% Similarity=0.341 Sum_probs=32.2
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
.+||+|||||++|+++|+.|+++|++|+||||++
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~ 37 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKG 37 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTS
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCC
Confidence 5899999999999999999999999999999774
No 137
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.85 E-value=9.8e-09 Score=90.21 Aligned_cols=35 Identities=31% Similarity=0.496 Sum_probs=32.2
Q ss_pred cceEEEEcCCHHHHHHHHHHHhC--CCcEEEEeccCc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMS 53 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~--g~~V~viE~~~~ 53 (270)
++||+|||||++|+++|+.|+++ |.+|+|||+.+.
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~ 39 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEW 39 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSC
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCc
Confidence 47999999999999999999998 789999999863
No 138
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.84 E-value=1.8e-08 Score=86.76 Aligned_cols=101 Identities=23% Similarity=0.348 Sum_probs=74.9
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcccc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 98 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 98 (270)
..+++|||||++|+.+|..|++.|.+|+|+|+.+...... +.+ .+
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~--------~~~-----------~~---------------- 189 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGL--------LHP-----------AA---------------- 189 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT--------SCH-----------HH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhcc--------cCH-----------HH----------------
Confidence 5689999999999999999999999999999985311000 000 00
Q ss_pred ccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCeEEEEEcCCcEEeccEE
Q 024233 99 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLL 178 (270)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~ad~v 178 (270)
...+.+.|. ..+.. ++.+++|+++..+++++.+.+.+|+++++|.|
T Consensus 190 --------------------------------~~~l~~~l~-~~gv~-i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~v 235 (384)
T 2v3a_A 190 --------------------------------AKAVQAGLE-GLGVR-FHLGPVLASLKKAGEGLEAHLSDGEVIPCDLV 235 (384)
T ss_dssp --------------------------------HHHHHHHHH-TTTCE-EEESCCEEEEEEETTEEEEEETTSCEEEESEE
T ss_pred --------------------------------HHHHHHHHH-HcCCE-EEeCCEEEEEEecCCEEEEEECCCCEEECCEE
Confidence 112222222 23444 88899999999888888889999999999999
Q ss_pred EecCCCCchh
Q 024233 179 VGADGIWSKV 188 (270)
Q Consensus 179 I~AdG~~S~v 188 (270)
|.|.|.++..
T Consensus 236 v~a~G~~p~~ 245 (384)
T 2v3a_A 236 VSAVGLRPRT 245 (384)
T ss_dssp EECSCEEECC
T ss_pred EECcCCCcCH
Confidence 9999988754
No 139
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.84 E-value=1.3e-08 Score=89.63 Aligned_cols=33 Identities=42% Similarity=0.612 Sum_probs=31.8
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
+||+|||||++|+++|..|++.|++|+|||+.+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~ 34 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEK 34 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCC
Confidence 799999999999999999999999999999985
No 140
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.84 E-value=1.4e-08 Score=88.20 Aligned_cols=36 Identities=33% Similarity=0.676 Sum_probs=33.1
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCc--EEEEeccCc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFE--VLVFEKDMS 53 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~--V~viE~~~~ 53 (270)
+++||+|||||++|+++|..|+++|++ |+|||+.+.
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~ 45 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPE 45 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSS
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCC
Confidence 458999999999999999999999987 999999863
No 141
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.83 E-value=3.4e-08 Score=86.27 Aligned_cols=34 Identities=21% Similarity=0.492 Sum_probs=31.9
Q ss_pred ceEEEEcCCHHHHHHHHHHHh--CCCcEEEEeccCc
Q 024233 20 LRILVAGGGIGGLVFALAAKR--KGFEVLVFEKDMS 53 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~--~g~~V~viE~~~~ 53 (270)
+||+|||||++|+++|+.|++ .|++|+|||+++.
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~ 38 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPY 38 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCC
Confidence 699999999999999999999 7899999999864
No 142
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.82 E-value=2.6e-08 Score=88.49 Aligned_cols=36 Identities=36% Similarity=0.493 Sum_probs=33.1
Q ss_pred CCcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 17 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 17 ~~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
..++||+|||||++|+++|+.|++.|++|+|||+.+
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~ 39 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVE 39 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecc
Confidence 356899999999999999999999999999999854
No 143
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.82 E-value=1.5e-08 Score=89.50 Aligned_cols=34 Identities=32% Similarity=0.533 Sum_probs=32.4
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
++||+|||||++|+++|+.|++.|++|+|||+.+
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~ 35 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRG 35 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 4799999999999999999999999999999985
No 144
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.82 E-value=2.5e-08 Score=87.27 Aligned_cols=34 Identities=26% Similarity=0.478 Sum_probs=31.9
Q ss_pred ceEEEEcCCHHHHHHHHHHHh---CCCcEEEEeccCc
Q 024233 20 LRILVAGGGIGGLVFALAAKR---KGFEVLVFEKDMS 53 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~---~g~~V~viE~~~~ 53 (270)
+||+|||||++|+++|+.|++ .|++|+|||+.+.
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~ 41 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDY 41 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCC
Confidence 699999999999999999999 8999999999863
No 145
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.81 E-value=3.9e-08 Score=87.20 Aligned_cols=35 Identities=29% Similarity=0.388 Sum_probs=32.5
Q ss_pred CCcceEEEEcCCHHHHHHHHHHHhCCCcEEEEecc
Q 024233 17 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 51 (270)
Q Consensus 17 ~~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~ 51 (270)
+..+||+|||||++|+++|+.|+++|++|+|||+.
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~ 41 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFV 41 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEec
Confidence 35689999999999999999999999999999964
No 146
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.80 E-value=1.9e-08 Score=90.85 Aligned_cols=111 Identities=21% Similarity=0.252 Sum_probs=69.8
Q ss_pred ceEEEEcCCHHHHHHHHHHHhC--CCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCccc
Q 024233 20 LRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 97 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~--g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~ 97 (270)
++|+|||||++|+++|+.|+++ |.+|+|||+.+... ..+. ++...+. +. .
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~-----------~~~~----------~l~~~~~--~~-----~ 53 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVS-----------FANC----------GLPYHIS--GE-----I 53 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSS-----------BCGG----------GHHHHHT--SS-----S
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcc-----------cccc----------CchHHhc--CC-----c
Confidence 4899999999999999999998 78999999986421 1111 1110000 00 0
Q ss_pred cccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCeEEEEE-cCCc--EEe
Q 024233 98 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVL-ENGQ--CYA 174 (270)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~~-~~g~--~~~ 174 (270)
... . .. ... ..+.+.+..+.. ++.+++|+++..+++.+.+.. .+|+ ++.
T Consensus 54 -------~~~----------~-~~------~~~---~~~~~~~~~~i~-~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~ 105 (565)
T 3ntd_A 54 -------AQR----------S-AL------VLQ---TPESFKARFNVE-VRVKHEVVAIDRAAKLVTVRRLLDGSEYQES 105 (565)
T ss_dssp -------CCG----------G-GG------BCC---CHHHHHHHHCCE-EETTEEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred -------CCh----------H-Hh------hcc---CHHHHHHhcCcE-EEECCEEEEEECCCCEEEEEecCCCCeEEEE
Confidence 000 0 00 000 011222334555 788999999998888877765 2343 799
Q ss_pred ccEEEecCCCCc
Q 024233 175 GDLLVGADGIWS 186 (270)
Q Consensus 175 ad~vI~AdG~~S 186 (270)
+|.||+|+|...
T Consensus 106 ~d~lviAtG~~p 117 (565)
T 3ntd_A 106 YDTLLLSPGAAP 117 (565)
T ss_dssp CSEEEECCCEEE
T ss_pred CCEEEECCCCCC
Confidence 999999999743
No 147
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.79 E-value=5.7e-08 Score=84.20 Aligned_cols=34 Identities=35% Similarity=0.468 Sum_probs=31.8
Q ss_pred ceEEEEcCCHHHHHHHHHHHh---CCCcEEEEeccCc
Q 024233 20 LRILVAGGGIGGLVFALAAKR---KGFEVLVFEKDMS 53 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~---~g~~V~viE~~~~ 53 (270)
.+|+|||||++|+++|+.|++ .|++|+|||+++.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~ 38 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRF 38 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCC
Confidence 489999999999999999999 8999999999963
No 148
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.79 E-value=2.7e-08 Score=87.79 Aligned_cols=34 Identities=32% Similarity=0.502 Sum_probs=32.6
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
.+||+|||||++|+++|..|++.|++|+|||+.+
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~ 39 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 5899999999999999999999999999999985
No 149
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.78 E-value=2.7e-08 Score=88.62 Aligned_cols=34 Identities=35% Similarity=0.431 Sum_probs=32.2
Q ss_pred cceEEEEcCCHHHHHHHHHHHhC---CCcEEEEeccC
Q 024233 19 KLRILVAGGGIGGLVFALAAKRK---GFEVLVFEKDM 52 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~---g~~V~viE~~~ 52 (270)
.+||+|||||++|+++|+.|+++ |++|+|||+.+
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC
Confidence 47999999999999999999999 99999999985
No 150
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.77 E-value=4.4e-08 Score=86.12 Aligned_cols=34 Identities=15% Similarity=0.258 Sum_probs=31.7
Q ss_pred ceEEEEcCCHHHHHHHHHHHhC--CCcEEEEeccCc
Q 024233 20 LRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMS 53 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~--g~~V~viE~~~~ 53 (270)
+||+|||||++|+++|..|+++ |.+|+|||+.+.
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~ 36 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDN 36 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCC
Confidence 5899999999999999999998 999999999863
No 151
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.77 E-value=6e-08 Score=85.10 Aligned_cols=34 Identities=21% Similarity=0.262 Sum_probs=31.5
Q ss_pred ceEEEEcCCHHHHHHHHHHHhC--CCcEEEEeccCc
Q 024233 20 LRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMS 53 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~--g~~V~viE~~~~ 53 (270)
+||+|||||++|+++|..|++. |.+|+|||+.+.
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~ 36 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDF 36 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCc
Confidence 4899999999999999999998 899999999853
No 152
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.77 E-value=4.9e-08 Score=84.67 Aligned_cols=36 Identities=19% Similarity=0.454 Sum_probs=32.5
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCC--cEEEEeccCc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDMS 53 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~--~V~viE~~~~ 53 (270)
.++||+|||||++|+++|..|+++|. +|+|||+.+.
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~ 43 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAE 43 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCS
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCC
Confidence 45799999999999999999999998 4999999853
No 153
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.77 E-value=6e-08 Score=84.69 Aligned_cols=34 Identities=21% Similarity=0.442 Sum_probs=30.6
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCC--CcEEEEeccCc
Q 024233 20 LRILVAGGGIGGLVFALAAKRKG--FEVLVFEKDMS 53 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g--~~V~viE~~~~ 53 (270)
++|+|||||++|+++|..|++.+ .+|+|||+++.
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~ 38 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPY 38 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCC
Confidence 58999999999999999999875 78999999853
No 154
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.76 E-value=4.4e-09 Score=93.77 Aligned_cols=53 Identities=15% Similarity=0.137 Sum_probs=41.3
Q ss_pred HHHHHHHHHHhcCCc--cEEeCceEEEEEecCCeEEEEEcCCcEEeccEEEecCCCC
Q 024233 131 RMTLQQILAKAVGDE--IILNESNVIDFKDHGDKVSVVLENGQCYAGDLLVGADGIW 185 (270)
Q Consensus 131 ~~~l~~~L~~~~~~~--~i~~~~~v~~i~~~~~~~~v~~~~g~~~~ad~vI~AdG~~ 185 (270)
-..|.+.|.+.+... .++.+++|++|..+++. +++.+|+++.||.||.+.-..
T Consensus 221 ~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~~--v~~~~G~~~~ad~vI~t~P~~ 275 (513)
T 4gde_A 221 TGGIWIAVANTLPKEKTRFGEKGKVTKVNANNKT--VTLQDGTTIGYKKLVSTMAVD 275 (513)
T ss_dssp HHHHHHHHHHTSCGGGEEESGGGCEEEEETTTTE--EEETTSCEEEEEEEEECSCHH
T ss_pred HHHHHHHHHHHHHhcCeeeecceEEEEEEccCCE--EEEcCCCEEECCEEEECCCHH
Confidence 466777887776543 48899999999887775 457899999999999876543
No 155
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.75 E-value=7.8e-08 Score=84.59 Aligned_cols=100 Identities=27% Similarity=0.357 Sum_probs=75.0
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcccc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 98 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 98 (270)
..+|+|||||++|+.+|..|++.|.+|+|+|+.+..... .+..+
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~--------------------~~~~~---------------- 210 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPT--------------------MDLEV---------------- 210 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT--------------------SCHHH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccccc--------------------cCHHH----------------
Confidence 468999999999999999999999999999998531100 00000
Q ss_pred ccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCeEEEEEcCCcEEeccEE
Q 024233 99 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLL 178 (270)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~ad~v 178 (270)
...+.+.|.+ .+.. ++.+++|+++..+++++.+.+.+|+++.+|.|
T Consensus 211 --------------------------------~~~l~~~l~~-~Gv~-i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~v 256 (455)
T 2yqu_A 211 --------------------------------SRAAERVFKK-QGLT-IRTGVRVTAVVPEAKGARVELEGGEVLEADRV 256 (455)
T ss_dssp --------------------------------HHHHHHHHHH-HTCE-EECSCCEEEEEEETTEEEEEETTSCEEEESEE
T ss_pred --------------------------------HHHHHHHHHH-CCCE-EEECCEEEEEEEeCCEEEEEECCCeEEEcCEE
Confidence 1112222222 3555 88899999999888888888888889999999
Q ss_pred EecCCCCchh
Q 024233 179 VGADGIWSKV 188 (270)
Q Consensus 179 I~AdG~~S~v 188 (270)
|.|+|.++..
T Consensus 257 v~A~G~~p~~ 266 (455)
T 2yqu_A 257 LVAVGRRPYT 266 (455)
T ss_dssp EECSCEEECC
T ss_pred EECcCCCcCC
Confidence 9999998765
No 156
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.75 E-value=1.1e-07 Score=85.26 Aligned_cols=43 Identities=16% Similarity=0.078 Sum_probs=38.8
Q ss_pred cEEeCceEEEEEecCCeEEEEEcCCcEEeccEEEecCCCCchh
Q 024233 146 IILNESNVIDFKDHGDKVSVVLENGQCYAGDLLVGADGIWSKV 188 (270)
Q Consensus 146 ~i~~~~~v~~i~~~~~~~~v~~~~g~~~~ad~vI~AdG~~S~v 188 (270)
.++.++.++.++..++.+.+.+.++..+.+|.|+.|.|+...+
T Consensus 279 ~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR~Pnt 321 (542)
T 4b1b_A 279 MFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGRKGDI 321 (542)
T ss_dssp EEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEESC
T ss_pred eeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEcccccCCc
Confidence 3889999999999999999999999999999999999987654
No 157
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.74 E-value=4e-09 Score=93.75 Aligned_cols=34 Identities=24% Similarity=0.342 Sum_probs=32.3
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
.+||+|||||++|+++|+.|+++|++|+|||+++
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~ 41 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA 41 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 5899999999999999999999999999999974
No 158
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.74 E-value=6.1e-08 Score=85.51 Aligned_cols=100 Identities=25% Similarity=0.314 Sum_probs=73.2
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcccc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 98 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 98 (270)
+.+|+|||||++|+-+|..|++.|.+|+|+|+.+..... .+..+
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~--------------------~~~~~---------------- 212 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQ--------------------GDPET---------------- 212 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT--------------------SCHHH----------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccc--------------------cCHHH----------------
Confidence 468999999999999999999999999999998532100 00000
Q ss_pred ccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCeEEEEEc-C--Cc--EE
Q 024233 99 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLE-N--GQ--CY 173 (270)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~-~--g~--~~ 173 (270)
...+.+.|. ..+.. ++.+++|+++..+++++.+.+. + |+ ++
T Consensus 213 --------------------------------~~~l~~~l~-~~gV~-i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i 258 (464)
T 2eq6_A 213 --------------------------------AALLRRALE-KEGIR-VRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEV 258 (464)
T ss_dssp --------------------------------HHHHHHHHH-HTTCE-EECSEEEEEEEEETTEEEEEEEETTCCSCEEE
T ss_pred --------------------------------HHHHHHHHH-hcCCE-EEcCCEEEEEEEeCCEEEEEEeecCCCceeEE
Confidence 111222222 23444 8889999999988777877776 6 76 89
Q ss_pred eccEEEecCCCCchh
Q 024233 174 AGDLLVGADGIWSKV 188 (270)
Q Consensus 174 ~ad~vI~AdG~~S~v 188 (270)
.+|.||.|.|..+..
T Consensus 259 ~~D~vv~a~G~~p~~ 273 (464)
T 2eq6_A 259 VVDKVLVAVGRKPRT 273 (464)
T ss_dssp EESEEEECSCEEESC
T ss_pred EcCEEEECCCcccCC
Confidence 999999999987654
No 159
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.73 E-value=6.3e-08 Score=83.85 Aligned_cols=33 Identities=18% Similarity=0.479 Sum_probs=31.5
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCC--cEEEEeccC
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 52 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~--~V~viE~~~ 52 (270)
++|+|||||++|+++|..|+++|+ +|+|||+.+
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~ 36 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEK 36 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSS
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCC
Confidence 589999999999999999999999 899999986
No 160
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.73 E-value=7.9e-08 Score=82.17 Aligned_cols=34 Identities=26% Similarity=0.450 Sum_probs=31.1
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
..||+|||||++|+++|..|+++| +|+|||+.+.
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~ 41 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPV 41 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSS
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCC
Confidence 359999999999999999999999 9999999863
No 161
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.72 E-value=5.5e-09 Score=92.93 Aligned_cols=37 Identities=24% Similarity=0.462 Sum_probs=32.9
Q ss_pred CCcceEEEEcCCHHHHHHHHHHHhC--CCcEEEEeccCc
Q 024233 17 NKKLRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMS 53 (270)
Q Consensus 17 ~~~~dV~IIGgG~aGl~~A~~La~~--g~~V~viE~~~~ 53 (270)
+..+||+|||||++|+++|..|.++ |.+|+|||+.+.
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~ 47 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPE 47 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSS
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 3468999999999999999999887 889999999863
No 162
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.72 E-value=1.5e-07 Score=82.98 Aligned_cols=35 Identities=26% Similarity=0.407 Sum_probs=32.6
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
.++||+|||||++|+++|+.|+++|++|+|||+..
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~ 37 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERGT 37 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 35899999999999999999999999999999983
No 163
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.69 E-value=1.6e-07 Score=82.56 Aligned_cols=100 Identities=19% Similarity=0.198 Sum_probs=73.7
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcccc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 98 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 98 (270)
..+|+|||||++|+-+|..|++.|.+|+|+|+.+..... +.+.
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~---------~~~~---------------------------- 209 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLPS---------FDPM---------------------------- 209 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT---------SCHH----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhhh---------hhHH----------------------------
Confidence 468999999999999999999999999999998531100 0000
Q ss_pred ccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCe-EEEEEcCCcEEeccE
Q 024233 99 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDK-VSVVLENGQCYAGDL 177 (270)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~-~~v~~~~g~~~~ad~ 177 (270)
-...+.+.|.+ .+.. ++.+++|+++..++++ +.+.+.+|+++.+|.
T Consensus 210 -------------------------------~~~~l~~~l~~-~Gv~-i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~ 256 (450)
T 1ges_A 210 -------------------------------ISETLVEVMNA-EGPQ-LHTNAIPKAVVKNTDGSLTLELEDGRSETVDC 256 (450)
T ss_dssp -------------------------------HHHHHHHHHHH-HSCE-EECSCCEEEEEECTTSCEEEEETTSCEEEESE
T ss_pred -------------------------------HHHHHHHHHHH-CCCE-EEeCCEEEEEEEeCCcEEEEEECCCcEEEcCE
Confidence 01122222222 3445 8889999999876554 788888998999999
Q ss_pred EEecCCCCchh
Q 024233 178 LVGADGIWSKV 188 (270)
Q Consensus 178 vI~AdG~~S~v 188 (270)
||.|.|..+..
T Consensus 257 vv~a~G~~p~~ 267 (450)
T 1ges_A 257 LIWAIGREPAN 267 (450)
T ss_dssp EEECSCEEESC
T ss_pred EEECCCCCcCC
Confidence 99999987765
No 164
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.66 E-value=8.3e-09 Score=86.81 Aligned_cols=36 Identities=19% Similarity=0.407 Sum_probs=32.0
Q ss_pred CcceEEEEcCCHHHHHHHHHHHh--CCCcEEEEeccCc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKR--KGFEVLVFEKDMS 53 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~--~g~~V~viE~~~~ 53 (270)
..+||+||||||+||++|+.|++ .|++|+|||+.+.
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~ 101 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVA 101 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSS
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCC
Confidence 34799999999999999999975 5999999999854
No 165
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.65 E-value=3.1e-07 Score=81.59 Aligned_cols=33 Identities=27% Similarity=0.397 Sum_probs=31.0
Q ss_pred CcceEEEEcCCHHHHHHHHHHHh-CCCcEEEEec
Q 024233 18 KKLRILVAGGGIGGLVFALAAKR-KGFEVLVFEK 50 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~-~g~~V~viE~ 50 (270)
..+||+|||||++|+++|+.|++ .|++|+|||+
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 35 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDL 35 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEec
Confidence 35899999999999999999999 9999999994
No 166
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.65 E-value=2.5e-07 Score=81.50 Aligned_cols=100 Identities=21% Similarity=0.184 Sum_probs=74.3
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcccc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 98 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 98 (270)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.+..... +.+ .+.
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~~---------~~~-----------~~~--------------- 210 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQ---------FDP-----------LLS--------------- 210 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT---------SCH-----------HHH---------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccccc---------cCH-----------HHH---------------
Confidence 468999999999999999999999999999998532100 000 000
Q ss_pred ccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCeEEEEEcCCc-EEeccE
Q 024233 99 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQ-CYAGDL 177 (270)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~~g~-~~~ad~ 177 (270)
..+.+.|. ..+.. ++.+++|+++..+++++.+.+.+|+ ++.+|.
T Consensus 211 ---------------------------------~~l~~~l~-~~gv~-i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~ 255 (463)
T 2r9z_A 211 ---------------------------------ATLAENMH-AQGIE-THLEFAVAALERDAQGTTLVAQDGTRLEGFDS 255 (463)
T ss_dssp ---------------------------------HHHHHHHH-HTTCE-EESSCCEEEEEEETTEEEEEETTCCEEEEESE
T ss_pred ---------------------------------HHHHHHHH-HCCCE-EEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCE
Confidence 11222222 23444 8889999999887777888899998 899999
Q ss_pred EEecCCCCchh
Q 024233 178 LVGADGIWSKV 188 (270)
Q Consensus 178 vI~AdG~~S~v 188 (270)
||.|.|..+..
T Consensus 256 vv~a~G~~p~~ 266 (463)
T 2r9z_A 256 VIWAVGRAPNT 266 (463)
T ss_dssp EEECSCEEESC
T ss_pred EEECCCCCcCC
Confidence 99999987654
No 167
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.62 E-value=8.5e-08 Score=85.22 Aligned_cols=109 Identities=18% Similarity=0.245 Sum_probs=71.6
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcccc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 98 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 98 (270)
.+||+|||||++|+++|+.|+++ ++|+|||+.+... |. + .. .. ...
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~G---G~----~--~~-------------------~~----~~~- 153 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLG---GD----M--WL-------------------KG----IKQ- 153 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSS---CS----G--GG-------------------TC----SEE-
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCC---Ce----e--ec-------------------cc----ccc-
Confidence 46999999999999999999999 9999999986321 10 0 00 00 000
Q ss_pred ccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCc-cEEeCceEEEEEecCCeEEEEE-cCCc--EEe
Q 024233 99 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDE-IILNESNVIDFKDHGDKVSVVL-ENGQ--CYA 174 (270)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~-~i~~~~~v~~i~~~~~~~~v~~-~~g~--~~~ 174 (270)
.+.+ . ...++.+.+.+.+... .++.+++|.++..+++.+.+.. .+++ ++.
T Consensus 154 ----------------------~g~~--~--~~~~~~~~l~~~l~~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~ 207 (493)
T 1y56_A 154 ----------------------EGFN--K--DSRKVVEELVGKLNENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEIL 207 (493)
T ss_dssp ----------------------TTTT--E--EHHHHHHHHHHTCCTTEEEETTEEECCCEECSSSEEEEEEETTEEEEEE
T ss_pred ----------------------CCCC--C--CHHHHHHHHHHHHhcCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEE
Confidence 0011 1 3445555555554222 2677888988888777665544 4454 689
Q ss_pred ccEEEecCCCCch
Q 024233 175 GDLLVGADGIWSK 187 (270)
Q Consensus 175 ad~vI~AdG~~S~ 187 (270)
+|.+|+|+|....
T Consensus 208 ~d~lvlAtGa~~~ 220 (493)
T 1y56_A 208 AKRVVLATGAIDS 220 (493)
T ss_dssp ESCEEECCCEEEC
T ss_pred CCEEEECCCCCcc
Confidence 9999999997543
No 168
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.60 E-value=1e-07 Score=81.93 Aligned_cols=34 Identities=18% Similarity=0.327 Sum_probs=31.0
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCC--cEEEEeccC
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 52 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~--~V~viE~~~ 52 (270)
++||+|||||++|+++|..|+++|. +|+|+|+++
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD 39 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 4799999999999999999999994 689999874
No 169
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.59 E-value=2.5e-07 Score=81.44 Aligned_cols=140 Identities=9% Similarity=0.046 Sum_probs=81.5
Q ss_pred cceEEEEcCCHHHHHHHHHHHhC--CCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 96 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~--g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~ 96 (270)
..+|+|||||.+|+-+|..|++. |.+|++++|.+............-...|.....+..+.......+.+.....
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~--- 303 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNT--- 303 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGG---
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhcc---
Confidence 56899999999999999999998 8899999998642111100000001234444445544322222222221100
Q ss_pred ccccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHH-h----cCCccEEeCceEEEEEecCCeEEEEEc---
Q 024233 97 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAK-A----VGDEIILNESNVIDFKDHGDKVSVVLE--- 168 (270)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~-~----~~~~~i~~~~~v~~i~~~~~~~~v~~~--- 168 (270)
.+. +.. ..+ -..+.+.+.+ . .+. .++.+++|++++.+++++.+.+.
T Consensus 304 ---~~~-------------------~~~--~~~-~~~~~~~l~~~~~~~~~~v-~i~~~~~v~~v~~~~~~~~v~~~~~~ 357 (463)
T 3s5w_A 304 ---NYS-------------------VVD--TDL-IERIYGVFYRQKVSGIPRH-AFRCMTTVERATATAQGIELALRDAG 357 (463)
T ss_dssp ---TSS-------------------CBC--HHH-HHHHHHHHHHHHHHCCCCS-EEETTEEEEEEEEETTEEEEEEEETT
T ss_pred ---CCC-------------------cCC--HHH-HHHHHHHHHHHHhcCCCCe-EEEeCCEEEEEEecCCEEEEEEEEcC
Confidence 000 000 000 0111122222 1 233 38999999999998888888876
Q ss_pred CCc--EEeccEEEecCCCCch
Q 024233 169 NGQ--CYAGDLLVGADGIWSK 187 (270)
Q Consensus 169 ~g~--~~~ad~vI~AdG~~S~ 187 (270)
+|+ ++.+|.||.|+|....
T Consensus 358 ~g~~~~~~~D~Vv~AtG~~p~ 378 (463)
T 3s5w_A 358 SGELSVETYDAVILATGYERQ 378 (463)
T ss_dssp TCCEEEEEESEEEECCCEECC
T ss_pred CCCeEEEECCEEEEeeCCCCC
Confidence 665 4999999999998654
No 170
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.59 E-value=4.8e-08 Score=85.88 Aligned_cols=37 Identities=22% Similarity=0.284 Sum_probs=34.3
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCcc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSA 54 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~ 54 (270)
..+||+|||||++||++|+.|+++|++|+|+|+++..
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~ 46 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHY 46 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 4589999999999999999999999999999999753
No 171
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.59 E-value=2.8e-07 Score=81.52 Aligned_cols=101 Identities=26% Similarity=0.305 Sum_probs=71.5
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcccc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 98 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 98 (270)
..+|+|||||++|+-+|..|++.|.+|+|+|+.+..... +.+. +
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~---------~~~~-----------~---------------- 226 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGAS---------MDGE-----------V---------------- 226 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSS---------SCHH-----------H----------------
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccc---------cCHH-----------H----------------
Confidence 468999999999999999999999999999998632110 0000 0
Q ss_pred ccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEe--cCCeEEEEEc-----CCc
Q 024233 99 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKD--HGDKVSVVLE-----NGQ 171 (270)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~--~~~~~~v~~~-----~g~ 171 (270)
...+.+.| +..+.. ++.+++|+++.. +++.+.+.+. +++
T Consensus 227 --------------------------------~~~l~~~l-~~~gv~-i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~ 272 (478)
T 1v59_A 227 --------------------------------AKATQKFL-KKQGLD-FKLSTKVISAKRNDDKNVVEIVVEDTKTNKQE 272 (478)
T ss_dssp --------------------------------HHHHHHHH-HHTTCE-EECSEEEEEEEEETTTTEEEEEEEETTTTEEE
T ss_pred --------------------------------HHHHHHHH-HHCCCE-EEeCCEEEEEEEecCCCeEEEEEEEcCCCCce
Confidence 11122222 223444 888999999987 5666667665 456
Q ss_pred EEeccEEEecCCCCchhh
Q 024233 172 CYAGDLLVGADGIWSKVR 189 (270)
Q Consensus 172 ~~~ad~vI~AdG~~S~vr 189 (270)
++.+|.||.|.|..+...
T Consensus 273 ~~~~D~vv~a~G~~p~~~ 290 (478)
T 1v59_A 273 NLEAEVLLVAVGRRPYIA 290 (478)
T ss_dssp EEEESEEEECSCEEECCT
T ss_pred EEECCEEEECCCCCcCCC
Confidence 899999999999876553
No 172
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.55 E-value=4.7e-07 Score=79.20 Aligned_cols=110 Identities=21% Similarity=0.206 Sum_probs=67.4
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCC--cEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcccc
Q 024233 21 RILVAGGGIGGLVFALAAKRKGF--EVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 98 (270)
Q Consensus 21 dV~IIGgG~aGl~~A~~La~~g~--~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 98 (270)
+|+|||||++|+++|..|++.|. +|+|||+.+... .....+ ..+.... .
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~-----------~~~~~l-----------~~~~~~~------~- 52 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMS-----------FANCAL-----------PYVIGEV------V- 52 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSS-----------BCGGGH-----------HHHHTTS------S-
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCC-----------CCcchh-----------HHHHcCC------c-
Confidence 69999999999999999999884 699999985311 000000 0000000 0
Q ss_pred ccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCeEEEEEcC---CcEEec
Q 024233 99 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLEN---GQCYAG 175 (270)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~~---g~~~~a 175 (270)
... ... ...... .+.+..+.. ++.+++|+.+..+...+.+.... +.++.+
T Consensus 53 ------~~~------------~~~----~~~~~~----~~~~~~~i~-~~~~~~V~~id~~~~~~~~~~~~~~~~~~~~y 105 (437)
T 4eqs_A 53 ------EDR------------RYA----LAYTPE----KFYDRKQIT-VKTYHEVIAINDERQTVSVLNRKTNEQFEESY 105 (437)
T ss_dssp ------CCG------------GGT----BCCCHH----HHHHHHCCE-EEETEEEEEEETTTTEEEEEETTTTEEEEEEC
T ss_pred ------cch------------hhh----hhcCHH----HHHHhcCCE-EEeCCeEEEEEccCcEEEEEeccCCceEEEEc
Confidence 000 000 001111 223334555 77889999998887777766543 346899
Q ss_pred cEEEecCCCCc
Q 024233 176 DLLVGADGIWS 186 (270)
Q Consensus 176 d~vI~AdG~~S 186 (270)
|.+|+|+|.+.
T Consensus 106 d~lVIATGs~p 116 (437)
T 4eqs_A 106 DKLILSPGASA 116 (437)
T ss_dssp SEEEECCCEEE
T ss_pred CEEEECCCCcc
Confidence 99999999754
No 173
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.55 E-value=1.2e-06 Score=76.02 Aligned_cols=100 Identities=21% Similarity=0.248 Sum_probs=73.4
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcccc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 98 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 98 (270)
..+|+|||||.+|+-+|..|++.|.+|+++|+.+...... +.+. +
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~--------~~~~-----------~---------------- 196 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARV--------AGEA-----------L---------------- 196 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT--------SCHH-----------H----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhh--------cCHH-----------H----------------
Confidence 5689999999999999999999999999999986421100 0000 0
Q ss_pred ccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCeE-EEEEcCCcEEeccE
Q 024233 99 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKV-SVVLENGQCYAGDL 177 (270)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~-~v~~~~g~~~~ad~ 177 (270)
...+.+ ..++.+.. ++.+++|+++..+++++ .+.+.+|+++.||.
T Consensus 197 --------------------------------~~~l~~-~l~~~GV~-i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~ 242 (415)
T 3lxd_A 197 --------------------------------SEFYQA-EHRAHGVD-LRTGAAMDCIEGDGTKVTGVRMQDGSVIPADI 242 (415)
T ss_dssp --------------------------------HHHHHH-HHHHTTCE-EEETCCEEEEEESSSBEEEEEESSSCEEECSE
T ss_pred --------------------------------HHHHHH-HHHhCCCE-EEECCEEEEEEecCCcEEEEEeCCCCEEEcCE
Confidence 001111 12233555 88899999999877776 58889999999999
Q ss_pred EEecCCCCch
Q 024233 178 LVGADGIWSK 187 (270)
Q Consensus 178 vI~AdG~~S~ 187 (270)
||.|.|..+.
T Consensus 243 Vv~a~G~~p~ 252 (415)
T 3lxd_A 243 VIVGIGIVPC 252 (415)
T ss_dssp EEECSCCEES
T ss_pred EEECCCCccC
Confidence 9999998765
No 174
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.54 E-value=1.8e-07 Score=83.32 Aligned_cols=35 Identities=23% Similarity=0.432 Sum_probs=32.3
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
.+.+|+|||||++|+++|..|++.+++|+|||+++
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSS
T ss_pred CCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCC
Confidence 34589999999999999999999999999999985
No 175
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.52 E-value=7.5e-07 Score=78.85 Aligned_cols=100 Identities=15% Similarity=0.204 Sum_probs=72.7
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcccc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 98 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 98 (270)
..+|+|||||.+|+-+|..|++.|.+|+++|+.+..... +.+ .+
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~---------~d~-----------~~---------------- 228 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRK---------FDE-----------CI---------------- 228 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCTT---------SCH-----------HH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccccc---------cCH-----------HH----------------
Confidence 468999999999999999999999999999998532110 000 00
Q ss_pred ccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCe--EEEEEcCC-cEEec
Q 024233 99 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDK--VSVVLENG-QCYAG 175 (270)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~--~~v~~~~g-~~~~a 175 (270)
...+.+.|. ..+.. ++.+++|+++..++++ +.+.+.+| +++.+
T Consensus 229 --------------------------------~~~l~~~l~-~~Gv~-i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~ 274 (479)
T 2hqm_A 229 --------------------------------QNTITDHYV-KEGIN-VHKLSKIVKVEKNVETDKLKIHMNDSKSIDDV 274 (479)
T ss_dssp --------------------------------HHHHHHHHH-HHTCE-EECSCCEEEEEECC-CCCEEEEETTSCEEEEE
T ss_pred --------------------------------HHHHHHHHH-hCCeE-EEeCCEEEEEEEcCCCcEEEEEECCCcEEEEc
Confidence 012222222 23455 8889999999876554 77888888 78999
Q ss_pred cEEEecCCCCchh
Q 024233 176 DLLVGADGIWSKV 188 (270)
Q Consensus 176 d~vI~AdG~~S~v 188 (270)
|.||.|.|..+..
T Consensus 275 D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 275 DELIWTIGRKSHL 287 (479)
T ss_dssp SEEEECSCEEECC
T ss_pred CEEEECCCCCCcc
Confidence 9999999987654
No 176
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.52 E-value=4.5e-07 Score=79.54 Aligned_cols=96 Identities=23% Similarity=0.295 Sum_probs=68.2
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCccc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 97 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~ 97 (270)
...+|+|||||++|+.+|..|++.|.+|+|+|+.+..... .++
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-------------------~~~------------------ 190 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV-------------------YLD------------------ 190 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT-------------------TCC------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccc-------------------cCC------------------
Confidence 4579999999999999999999999999999998531100 000
Q ss_pred cccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHh---cCCccEEeCceEEEEEecCCeE-EEEEcCCcEE
Q 024233 98 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKA---VGDEIILNESNVIDFKDHGDKV-SVVLENGQCY 173 (270)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~---~~~~~i~~~~~v~~i~~~~~~~-~v~~~~g~~~ 173 (270)
.++.+.+.+. .+.. ++.+++|+++..+ +++ .+.+ +++++
T Consensus 191 ----------------------------------~~~~~~l~~~l~~~gv~-i~~~~~v~~i~~~-~~v~~v~~-~~~~i 233 (447)
T 1nhp_A 191 ----------------------------------KEFTDVLTEEMEANNIT-IATGETVERYEGD-GRVQKVVT-DKNAY 233 (447)
T ss_dssp ----------------------------------HHHHHHHHHHHHTTTEE-EEESCCEEEEECS-SBCCEEEE-SSCEE
T ss_pred ----------------------------------HHHHHHHHHHHHhCCCE-EEcCCEEEEEEcc-CcEEEEEE-CCCEE
Confidence 1122222222 2444 8889999999876 443 3545 56789
Q ss_pred eccEEEecCCCCch
Q 024233 174 AGDLLVGADGIWSK 187 (270)
Q Consensus 174 ~ad~vI~AdG~~S~ 187 (270)
.+|.||.|.|..+.
T Consensus 234 ~~d~vi~a~G~~p~ 247 (447)
T 1nhp_A 234 DADLVVVAVGVRPN 247 (447)
T ss_dssp ECSEEEECSCEEES
T ss_pred ECCEEEECcCCCCC
Confidence 99999999998764
No 177
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.52 E-value=7.9e-07 Score=78.13 Aligned_cols=100 Identities=19% Similarity=0.285 Sum_probs=71.7
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcccc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 98 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 98 (270)
..+|+|||||++|+-+|..|++.|.+|+|+|+.+..... ++..+
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~--------------------~~~~~---------------- 213 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSG--------------------FEKQM---------------- 213 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT--------------------SCHHH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc--------------------cCHHH----------------
Confidence 468999999999999999999999999999998531100 00000
Q ss_pred ccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCeEEEEEc---CCcEEec
Q 024233 99 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLE---NGQCYAG 175 (270)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~---~g~~~~a 175 (270)
...+.+.|. ..+.. ++.+++|+++..+++++.+.+. +++++.+
T Consensus 214 --------------------------------~~~l~~~l~-~~gv~-i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~ 259 (455)
T 1ebd_A 214 --------------------------------AAIIKKRLK-KKGVE-VVTNALAKGAEEREDGVTVTYEANGETKTIDA 259 (455)
T ss_dssp --------------------------------HHHHHHHHH-HTTCE-EEESEEEEEEEEETTEEEEEEEETTEEEEEEE
T ss_pred --------------------------------HHHHHHHHH-HCCCE-EEeCCEEEEEEEeCCeEEEEEEeCCceeEEEc
Confidence 111222222 23444 8889999999887777777765 4568999
Q ss_pred cEEEecCCCCchh
Q 024233 176 DLLVGADGIWSKV 188 (270)
Q Consensus 176 d~vI~AdG~~S~v 188 (270)
|.||.|.|..+..
T Consensus 260 D~vv~a~G~~p~~ 272 (455)
T 1ebd_A 260 DYVLVTVGRRPNT 272 (455)
T ss_dssp SEEEECSCEEESC
T ss_pred CEEEECcCCCccc
Confidence 9999999987653
No 178
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.52 E-value=1e-07 Score=84.58 Aligned_cols=55 Identities=15% Similarity=0.185 Sum_probs=46.0
Q ss_pred HHHHHHHHHHhcCCccEEeCceEEEEEecCCeEEEEEcCC---cEEeccEEEecCCCC
Q 024233 131 RMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENG---QCYAGDLLVGADGIW 185 (270)
Q Consensus 131 ~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~~g---~~~~ad~vI~AdG~~ 185 (270)
-..|.+.|.+.++...|+.+++|++|..+++++.|++.+| ++++||.||.|...+
T Consensus 238 ~~~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~~~~ad~vI~a~p~~ 295 (489)
T 2jae_A 238 MDRIYYAFQDRIGTDNIVFGAEVTSMKNVSEGVTVEYTAGGSKKSITADYAICTIPPH 295 (489)
T ss_dssp TTHHHHHHHHHHCGGGEETTCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCHH
T ss_pred HHHHHHHHHHhcCCCeEEECCEEEEEEEcCCeEEEEEecCCeEEEEECCEEEECCCHH
Confidence 3567777888777334999999999999999999988876 689999999999865
No 179
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.52 E-value=1.2e-06 Score=75.74 Aligned_cols=100 Identities=27% Similarity=0.406 Sum_probs=72.6
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcccc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 98 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 98 (270)
..+|+|||+|.+|+-+|..|++.|.+|+++|+.+...... +.+. +
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~--------~~~~-----------~---------------- 186 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARV--------VTPE-----------I---------------- 186 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTT--------SCHH-----------H----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhc--------cCHH-----------H----------------
Confidence 4589999999999999999999999999999985321000 0000 0
Q ss_pred ccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCeEE-EEEcCCcEEeccE
Q 024233 99 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVS-VVLENGQCYAGDL 177 (270)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~-v~~~~g~~~~ad~ 177 (270)
...+.+. .++.+.. ++.+++|+++..+++++. +.+.+|+++.||.
T Consensus 187 --------------------------------~~~l~~~-l~~~GV~-i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~ 232 (404)
T 3fg2_P 187 --------------------------------SSYFHDR-HSGAGIR-MHYGVRATEIAAEGDRVTGVVLSDGNTLPCDL 232 (404)
T ss_dssp --------------------------------HHHHHHH-HHHTTCE-EECSCCEEEEEEETTEEEEEEETTSCEEECSE
T ss_pred --------------------------------HHHHHHH-HHhCCcE-EEECCEEEEEEecCCcEEEEEeCCCCEEEcCE
Confidence 0111111 2223455 888999999988777764 8889999999999
Q ss_pred EEecCCCCch
Q 024233 178 LVGADGIWSK 187 (270)
Q Consensus 178 vI~AdG~~S~ 187 (270)
||.|.|..+.
T Consensus 233 Vv~a~G~~p~ 242 (404)
T 3fg2_P 233 VVVGVGVIPN 242 (404)
T ss_dssp EEECCCEEEC
T ss_pred EEECcCCccC
Confidence 9999998654
No 180
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.51 E-value=8.3e-07 Score=76.58 Aligned_cols=34 Identities=32% Similarity=0.491 Sum_probs=30.4
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCC--CcEEEEeccCc
Q 024233 20 LRILVAGGGIGGLVFALAAKRKG--FEVLVFEKDMS 53 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g--~~V~viE~~~~ 53 (270)
++|+|||||++|+++|..|++++ .+|+|||+++.
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~ 38 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNET 38 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSS
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCC
Confidence 58999999999999999998876 58999999853
No 181
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.51 E-value=9.6e-08 Score=81.60 Aligned_cols=37 Identities=35% Similarity=0.548 Sum_probs=33.9
Q ss_pred CCcceEEEEcCCHHHHHHHHHHHhCCCcEEEEecc-Cc
Q 024233 17 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD-MS 53 (270)
Q Consensus 17 ~~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~-~~ 53 (270)
...+||+|||||++||++|+.|+++|++|+|||++ ..
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~ 79 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANR 79 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccc
Confidence 35679999999999999999999999999999998 43
No 182
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.50 E-value=8.2e-08 Score=83.03 Aligned_cols=35 Identities=29% Similarity=0.449 Sum_probs=33.0
Q ss_pred cceEEEEcCCHHHHHHHHHHHhC-CCcEEEEeccCc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRK-GFEVLVFEKDMS 53 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~-g~~V~viE~~~~ 53 (270)
.+||+|||||++||++|+.|+++ |++|+|+|+++.
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~ 42 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPH 42 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 58999999999999999999999 999999999864
No 183
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.49 E-value=1.3e-07 Score=81.47 Aligned_cols=37 Identities=27% Similarity=0.461 Sum_probs=34.1
Q ss_pred CCcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 17 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 17 ~~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
...+||+|||||++|+++|+.|+++|.+|+|+|+.+.
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~ 63 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPH 63 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCC
Confidence 3568999999999999999999999999999999864
No 184
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.48 E-value=6.9e-07 Score=77.46 Aligned_cols=100 Identities=21% Similarity=0.369 Sum_probs=72.5
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcccc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 98 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 98 (270)
..+|+|||||.+|+-+|..|++.|.+|+++|+.+... +. .++..+
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l-------------~~------~~~~~~---------------- 187 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELL-------------VR------VLGRRI---------------- 187 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------HH------HHCHHH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccc-------------hh------hcCHHH----------------
Confidence 4689999999999999999999999999999985311 00 000000
Q ss_pred ccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCeEEEEEcCCcEEeccEE
Q 024233 99 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLL 178 (270)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~ad~v 178 (270)
...+.+.+ +..+.. ++.+++|+++..++....+.+.+|+++.||.|
T Consensus 188 --------------------------------~~~l~~~l-~~~GV~-i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~V 233 (410)
T 3ef6_A 188 --------------------------------GAWLRGLL-TELGVQ-VELGTGVVGFSGEGQLEQVMASDGRSFVADSA 233 (410)
T ss_dssp --------------------------------HHHHHHHH-HHHTCE-EECSCCEEEEECSSSCCEEEETTSCEEECSEE
T ss_pred --------------------------------HHHHHHHH-HHCCCE-EEeCCEEEEEeccCcEEEEEECCCCEEEcCEE
Confidence 01111222 223455 88899999998766555788999999999999
Q ss_pred EecCCCCch
Q 024233 179 VGADGIWSK 187 (270)
Q Consensus 179 I~AdG~~S~ 187 (270)
|.|.|..+.
T Consensus 234 v~a~G~~p~ 242 (410)
T 3ef6_A 234 LICVGAEPA 242 (410)
T ss_dssp EECSCEEEC
T ss_pred EEeeCCeec
Confidence 999998765
No 185
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.48 E-value=1.1e-06 Score=78.06 Aligned_cols=99 Identities=21% Similarity=0.211 Sum_probs=72.5
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcccc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 98 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 98 (270)
..+|+|||||.+|+-+|..|++.|.+|+++|+.+..... +.+ .
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~---------~d~-----------~----------------- 216 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANL---------QDE-----------E----------------- 216 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTC---------CCH-----------H-----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc---------CCH-----------H-----------------
Confidence 468999999999999999999999999999998632100 000 0
Q ss_pred ccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCeEEEEEc--CC--cEEe
Q 024233 99 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLE--NG--QCYA 174 (270)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~--~g--~~~~ 174 (270)
-...+.+.|.+. .. ++.+++|++++.+++++.+.+. +| +++.
T Consensus 217 -------------------------------~~~~l~~~l~~~--V~-i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~ 262 (492)
T 3ic9_A 217 -------------------------------MKRYAEKTFNEE--FY-FDAKARVISTIEKEDAVEVIYFDKSGQKTTES 262 (492)
T ss_dssp -------------------------------HHHHHHHHHHTT--SE-EETTCEEEEEEECSSSEEEEEECTTCCEEEEE
T ss_pred -------------------------------HHHHHHHHHhhC--cE-EEECCEEEEEEEcCCEEEEEEEeCCCceEEEE
Confidence 011222223222 33 8889999999988888888775 67 6899
Q ss_pred ccEEEecCCCCchh
Q 024233 175 GDLLVGADGIWSKV 188 (270)
Q Consensus 175 ad~vI~AdG~~S~v 188 (270)
+|.||.|.|.....
T Consensus 263 ~D~Vi~a~G~~p~~ 276 (492)
T 3ic9_A 263 FQYVLAATGRKANV 276 (492)
T ss_dssp ESEEEECSCCEESC
T ss_pred CCEEEEeeCCccCC
Confidence 99999999986543
No 186
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.48 E-value=1.7e-06 Score=75.47 Aligned_cols=100 Identities=23% Similarity=0.378 Sum_probs=71.1
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcccc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 98 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 98 (270)
..+|+|||||++|+-+|..|++.|.+|+++|+.+...... +.+. +
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~--------~~~~-----------~---------------- 193 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERV--------TAPP-----------V---------------- 193 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTT--------SCHH-----------H----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccch--------hhHH-----------H----------------
Confidence 4689999999999999999999999999999975311000 0000 0
Q ss_pred ccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEe--cCCeE-EEEEcCCcEEec
Q 024233 99 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKD--HGDKV-SVVLENGQCYAG 175 (270)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~--~~~~~-~v~~~~g~~~~a 175 (270)
...+.+.| ++.+.. ++.+++|+++.. +++++ .+.+.+|+++.+
T Consensus 194 --------------------------------~~~l~~~l-~~~GV~-i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~ 239 (431)
T 1q1r_A 194 --------------------------------SAFYEHLH-REAGVD-IRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPA 239 (431)
T ss_dssp --------------------------------HHHHHHHH-HHHTCE-EECSCCEEEEEECTTTCCEEEEEETTSCEEEC
T ss_pred --------------------------------HHHHHHHH-HhCCeE-EEeCCEEEEEEeccCCCcEEEEEeCCCCEEEc
Confidence 01112222 223445 888999999987 45555 578889999999
Q ss_pred cEEEecCCCCch
Q 024233 176 DLLVGADGIWSK 187 (270)
Q Consensus 176 d~vI~AdG~~S~ 187 (270)
|.||.|.|..+.
T Consensus 240 D~Vv~a~G~~p~ 251 (431)
T 1q1r_A 240 DLVIAGIGLIPN 251 (431)
T ss_dssp SEEEECCCEEEC
T ss_pred CEEEECCCCCcC
Confidence 999999997654
No 187
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.47 E-value=1.4e-06 Score=77.54 Aligned_cols=100 Identities=17% Similarity=0.261 Sum_probs=74.2
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcccc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 98 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 98 (270)
..+++|||||.+|+-+|..|++.|.+|+++|+.+..... +.+. +
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~---------~d~~-----------~---------------- 225 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPY---------EDAD-----------A---------------- 225 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCC---------SSHH-----------H----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc---------cCHH-----------H----------------
Confidence 468999999999999999999999999999998532100 0000 0
Q ss_pred ccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCeEEEEEcCCcEEeccEE
Q 024233 99 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLL 178 (270)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~ad~v 178 (270)
...+.+.| ++.+.. ++.+++|+++..+++++.+.+.+|+++.+|.|
T Consensus 226 --------------------------------~~~l~~~l-~~~GV~-i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~V 271 (499)
T 1xdi_A 226 --------------------------------ALVLEESF-AERGVR-LFKNARAASVTRTGAGVLVTMTDGRTVEGSHA 271 (499)
T ss_dssp --------------------------------HHHHHHHH-HHTTCE-EETTCCEEEEEECSSSEEEEETTSCEEEESEE
T ss_pred --------------------------------HHHHHHHH-HHCCCE-EEeCCEEEEEEEeCCEEEEEECCCcEEEcCEE
Confidence 11122222 223445 88899999999877778888888889999999
Q ss_pred EecCCCCchh
Q 024233 179 VGADGIWSKV 188 (270)
Q Consensus 179 I~AdG~~S~v 188 (270)
|.|.|.++..
T Consensus 272 v~a~G~~p~~ 281 (499)
T 1xdi_A 272 LMTIGSVPNT 281 (499)
T ss_dssp EECCCEEECC
T ss_pred EECCCCCcCC
Confidence 9999988654
No 188
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.47 E-value=9e-07 Score=78.38 Aligned_cols=100 Identities=23% Similarity=0.217 Sum_probs=72.5
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcccc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 98 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 98 (270)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.+..... ++..+
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~--------------------~~~~~---------------- 228 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQG--------------------ADRDL---------------- 228 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT--------------------SCHHH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc--------------------cCHHH----------------
Confidence 468999999999999999999999999999998532100 00000
Q ss_pred ccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCeEEEEEcC----CcEEe
Q 024233 99 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLEN----GQCYA 174 (270)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~~----g~~~~ 174 (270)
...+.+.| +..+.. ++.+++|+++..+++++.+.+.+ |+++.
T Consensus 229 --------------------------------~~~l~~~l-~~~gV~-i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~ 274 (482)
T 1ojt_A 229 --------------------------------VKVWQKQN-EYRFDN-IMVNTKTVAVEPKEDGVYVTFEGANAPKEPQR 274 (482)
T ss_dssp --------------------------------HHHHHHHH-GGGEEE-EECSCEEEEEEEETTEEEEEEESSSCCSSCEE
T ss_pred --------------------------------HHHHHHHH-HhcCCE-EEECCEEEEEEEcCCeEEEEEeccCCCceEEE
Confidence 01112222 122334 88899999998887777788776 77899
Q ss_pred ccEEEecCCCCchh
Q 024233 175 GDLLVGADGIWSKV 188 (270)
Q Consensus 175 ad~vI~AdG~~S~v 188 (270)
+|.||.|.|..+..
T Consensus 275 ~D~vv~a~G~~p~~ 288 (482)
T 1ojt_A 275 YDAVLVAAGRAPNG 288 (482)
T ss_dssp ESCEEECCCEEECG
T ss_pred cCEEEECcCCCcCC
Confidence 99999999987654
No 189
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.45 E-value=2.1e-06 Score=76.37 Aligned_cols=100 Identities=20% Similarity=0.276 Sum_probs=72.5
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcccc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 98 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 98 (270)
..+|+|||||++|+-+|..|++.|.+|+++|+.+..... +.+ .+
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~---------~d~-----------~~---------------- 219 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRK---------FDE-----------SV---------------- 219 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCTT---------SCH-----------HH----------------
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCcc---------cch-----------hh----------------
Confidence 468999999999999999999999999999998532110 000 00
Q ss_pred ccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCC-eEEEEEcCCcE-Eecc
Q 024233 99 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGD-KVSVVLENGQC-YAGD 176 (270)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~-~~~v~~~~g~~-~~ad 176 (270)
...+.+.| +..+.. ++.+++|+++..+++ .+.+.+.+|++ +.+|
T Consensus 220 --------------------------------~~~l~~~l-~~~gv~-i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D 265 (500)
T 1onf_A 220 --------------------------------INVLENDM-KKNNIN-IVTFADVVEIKKVSDKNLSIHLSDGRIYEHFD 265 (500)
T ss_dssp --------------------------------HHHHHHHH-HHTTCE-EECSCCEEEEEESSTTCEEEEETTSCEEEEES
T ss_pred --------------------------------HHHHHHHH-HhCCCE-EEECCEEEEEEEcCCceEEEEECCCcEEEECC
Confidence 01122222 223444 888999999987654 47788888987 9999
Q ss_pred EEEecCCCCchh
Q 024233 177 LLVGADGIWSKV 188 (270)
Q Consensus 177 ~vI~AdG~~S~v 188 (270)
.||.|.|.....
T Consensus 266 ~vi~a~G~~p~~ 277 (500)
T 1onf_A 266 HVIYCVGRSPDT 277 (500)
T ss_dssp EEEECCCBCCTT
T ss_pred EEEECCCCCcCC
Confidence 999999987654
No 190
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.45 E-value=1.5e-07 Score=83.70 Aligned_cols=57 Identities=12% Similarity=0.127 Sum_probs=43.1
Q ss_pred HHHHHHHHHhcCCccEEeCceEEEEEecCCe------EEEEEc--CC---cEEeccEEEecCCCCchh
Q 024233 132 MTLQQILAKAVGDEIILNESNVIDFKDHGDK------VSVVLE--NG---QCYAGDLLVGADGIWSKV 188 (270)
Q Consensus 132 ~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~------~~v~~~--~g---~~~~ad~vI~AdG~~S~v 188 (270)
..|.+.|.+.++...|+.+++|++|..++++ +.|++. +| ++++||.||.|...+...
T Consensus 243 ~~l~~~l~~~l~~~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a~p~~~l~ 310 (504)
T 1sez_A 243 QTLTDAICKDLREDELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDVK 310 (504)
T ss_dssp HHHHHHHHTTSCTTTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHHHHH
T ss_pred HHHHHHHHhhcccceEEcCCeEEEEEecCCCCcccceEEEEEcCCCCccceeEECCEEEECCCHHHHH
Confidence 4566677777763349999999999987776 777665 45 578999999999876444
No 191
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.45 E-value=1.6e-06 Score=76.52 Aligned_cols=101 Identities=27% Similarity=0.314 Sum_probs=71.9
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcccc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 98 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 98 (270)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.+..... +.+ .
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~---------~d~-----------~----------------- 216 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPT---------LDE-----------D----------------- 216 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT---------SCH-----------H-----------------
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccccc---------CCH-----------H-----------------
Confidence 468999999999999999999999999999998531100 000 0
Q ss_pred ccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCeEEEEEc--CC--cEEe
Q 024233 99 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLE--NG--QCYA 174 (270)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~--~g--~~~~ 174 (270)
-...+.+.|.+..+.. ++.+++|+++..+++++.+.+. +| +++.
T Consensus 217 -------------------------------~~~~l~~~l~~~~gv~-i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~ 264 (468)
T 2qae_A 217 -------------------------------VTNALVGALAKNEKMK-FMTSTKVVGGTNNGDSVSLEVEGKNGKRETVT 264 (468)
T ss_dssp -------------------------------HHHHHHHHHHHHTCCE-EECSCEEEEEEECSSSEEEEEECC---EEEEE
T ss_pred -------------------------------HHHHHHHHHhhcCCcE-EEeCCEEEEEEEcCCeEEEEEEcCCCceEEEE
Confidence 0112333331333455 8889999999887777777765 66 6799
Q ss_pred ccEEEecCCCCchh
Q 024233 175 GDLLVGADGIWSKV 188 (270)
Q Consensus 175 ad~vI~AdG~~S~v 188 (270)
+|.||.|.|..+..
T Consensus 265 ~D~vv~a~G~~p~~ 278 (468)
T 2qae_A 265 CEALLVSVGRRPFT 278 (468)
T ss_dssp ESEEEECSCEEECC
T ss_pred CCEEEECCCcccCC
Confidence 99999999987654
No 192
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.45 E-value=1e-07 Score=84.36 Aligned_cols=38 Identities=34% Similarity=0.402 Sum_probs=33.9
Q ss_pred CCCCcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 15 SENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 15 ~~~~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
..+..+||+|||||++|+++|+.|+++|++|+|||+..
T Consensus 16 ~~~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~ 53 (478)
T 3dk9_A 16 GAVASYDYLVIGGGSGGLASARRAAELGARAAVVESHK 53 (478)
T ss_dssp -CEEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred ccCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Confidence 34456899999999999999999999999999999874
No 193
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.44 E-value=2e-06 Score=75.93 Aligned_cols=100 Identities=20% Similarity=0.298 Sum_probs=73.5
Q ss_pred cceEEEEcCCHHHHHHHHHHHhC-CCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCccc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRK-GFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 97 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~-g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~ 97 (270)
..+|+|||||.+|+-+|..|++. |.+|+++++.+...... +.+.
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~--------~~~~--------------------------- 203 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGF--------TSKS--------------------------- 203 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTT--------SCHH---------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccccc--------cCHH---------------------------
Confidence 46899999999999999999999 99999999985311000 0000
Q ss_pred cccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCeEEEEEcCCcEEeccE
Q 024233 98 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDL 177 (270)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~ad~ 177 (270)
-...+.+.| ++.+.. ++.+++|+++..+++++.+.+.+|+++.||.
T Consensus 204 --------------------------------~~~~l~~~l-~~~GV~-i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD~ 249 (472)
T 3iwa_A 204 --------------------------------LSQMLRHDL-EKNDVV-VHTGEKVVRLEGENGKVARVITDKRTLDADL 249 (472)
T ss_dssp --------------------------------HHHHHHHHH-HHTTCE-EECSCCEEEEEESSSBEEEEEESSCEEECSE
T ss_pred --------------------------------HHHHHHHHH-HhcCCE-EEeCCEEEEEEccCCeEEEEEeCCCEEEcCE
Confidence 011122222 223444 8889999999887788888889999999999
Q ss_pred EEecCCCCch
Q 024233 178 LVGADGIWSK 187 (270)
Q Consensus 178 vI~AdG~~S~ 187 (270)
||.|.|.++.
T Consensus 250 Vv~a~G~~p~ 259 (472)
T 3iwa_A 250 VILAAGVSPN 259 (472)
T ss_dssp EEECSCEEEC
T ss_pred EEECCCCCcC
Confidence 9999998754
No 194
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.43 E-value=1.7e-06 Score=77.42 Aligned_cols=99 Identities=16% Similarity=0.214 Sum_probs=73.0
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCccccc
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRING 99 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~ 99 (270)
.+|+|||||.+|+-+|..|++.|.+|+++|+.+..... +.+ .+
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~---------~~~-----------~~----------------- 257 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLI---------KDN-----------ET----------------- 257 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTC---------CSH-----------HH-----------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccccc---------ccH-----------HH-----------------
Confidence 78999999999999999999999999999998531100 000 00
Q ss_pred cccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCe----EEEEEcCCc-EEe
Q 024233 100 LVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDK----VSVVLENGQ-CYA 174 (270)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~----~~v~~~~g~-~~~ 174 (270)
...+.+.|. ..+.. ++.+++|+++..++++ +.+.+.+|+ ++.
T Consensus 258 -------------------------------~~~l~~~l~-~~GV~-i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~ 304 (523)
T 1mo9_A 258 -------------------------------RAYVLDRMK-EQGME-IISGSNVTRIEEDANGRVQAVVAMTPNGEMRIE 304 (523)
T ss_dssp -------------------------------HHHHHHHHH-HTTCE-EESSCEEEEEEECTTSBEEEEEEEETTEEEEEE
T ss_pred -------------------------------HHHHHHHHH-hCCcE-EEECCEEEEEEEcCCCceEEEEEEECCCcEEEE
Confidence 112222222 23455 8889999999876555 678888887 899
Q ss_pred ccEEEecCCCCchh
Q 024233 175 GDLLVGADGIWSKV 188 (270)
Q Consensus 175 ad~vI~AdG~~S~v 188 (270)
||.||.|.|.++..
T Consensus 305 aD~Vv~A~G~~p~~ 318 (523)
T 1mo9_A 305 TDFVFLGLGEQPRS 318 (523)
T ss_dssp CSCEEECCCCEECC
T ss_pred cCEEEECcCCccCC
Confidence 99999999998764
No 195
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.42 E-value=2.2e-07 Score=82.33 Aligned_cols=58 Identities=16% Similarity=0.217 Sum_probs=45.8
Q ss_pred eHHHHHHHHHHhcCCccEEeCc--eEEEEEecCCeEEEEEcCCcEEeccEEEecCCCCchhh
Q 024233 130 SRMTLQQILAKAVGDEIILNES--NVIDFKDHGDKVSVVLENGQCYAGDLLVGADGIWSKVR 189 (270)
Q Consensus 130 ~~~~l~~~L~~~~~~~~i~~~~--~v~~i~~~~~~~~v~~~~g~~~~ad~vI~AdG~~S~vr 189 (270)
.-..|.+.|.+.++...|+.++ +|++|..++++|+ +.+|+++.||.||.|...+...+
T Consensus 214 G~~~l~~~la~~l~~~~i~~~~~~~V~~I~~~~~~v~--~~~G~~~~ad~VI~a~p~~~~~~ 273 (484)
T 4dsg_A 214 GTGIIYQAIKEKLPSEKLTFNSGFQAIAIDADAKTIT--FSNGEVVSYDYLISTVPFDNLLR 273 (484)
T ss_dssp CTHHHHHHHHHHSCGGGEEECGGGCEEEEETTTTEEE--ETTSCEEECSEEEECSCHHHHHH
T ss_pred CHHHHHHHHHhhhhhCeEEECCCceeEEEEecCCEEE--ECCCCEEECCEEEECCCHHHHHH
Confidence 4677888888888764589994 6999998888764 57888999999999998665443
No 196
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.42 E-value=2.6e-06 Score=76.87 Aligned_cols=35 Identities=23% Similarity=0.281 Sum_probs=32.3
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
..+|+|||||.+|+-+|..|++.|.+|+++++.+.
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 185 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQ 185 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCc
Confidence 35899999999999999999999999999999853
No 197
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.41 E-value=3.1e-06 Score=73.30 Aligned_cols=96 Identities=24% Similarity=0.360 Sum_probs=68.4
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcccc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 98 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 98 (270)
..+|+|||||.+|+-+|..|++.|.+|+++|+.+...... +.+. +
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~--------~~~~-----------~---------------- 189 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRA--------APAT-----------L---------------- 189 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT--------SCHH-----------H----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccccc--------cCHH-----------H----------------
Confidence 4689999999999999999999999999999985321000 0000 0
Q ss_pred ccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCeEEEEEcCCcEEeccEE
Q 024233 99 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLL 178 (270)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~ad~v 178 (270)
...+.+.| ++.+.. ++.+++|+++. + + .+.+.+|+++.||.|
T Consensus 190 --------------------------------~~~l~~~l-~~~GV~-i~~~~~v~~i~-~-~--~v~~~~g~~i~~D~v 231 (408)
T 2gqw_A 190 --------------------------------ADFVARYH-AAQGVD-LRFERSVTGSV-D-G--VVLLDDGTRIAADMV 231 (408)
T ss_dssp --------------------------------HHHHHHHH-HHTTCE-EEESCCEEEEE-T-T--EEEETTSCEEECSEE
T ss_pred --------------------------------HHHHHHHH-HHcCcE-EEeCCEEEEEE-C-C--EEEECCCCEEEcCEE
Confidence 11122222 223444 88899999998 3 3 567788989999999
Q ss_pred EecCCCCch
Q 024233 179 VGADGIWSK 187 (270)
Q Consensus 179 I~AdG~~S~ 187 (270)
|.|.|....
T Consensus 232 i~a~G~~p~ 240 (408)
T 2gqw_A 232 VVGIGVLAN 240 (408)
T ss_dssp EECSCEEEC
T ss_pred EECcCCCcc
Confidence 999998754
No 198
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.41 E-value=1.5e-06 Score=77.12 Aligned_cols=100 Identities=26% Similarity=0.275 Sum_probs=73.0
Q ss_pred cceEEEEcCCHHHHHHHHHHHhC---CCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRK---GFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGD 95 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~---g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~ 95 (270)
..+++|||||.+|+-+|..|++. |.+|+++|+.+..... +.+ .+
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~---------~d~-----------~~------------- 233 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRG---------FDS-----------EL------------- 233 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTT---------SCH-----------HH-------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcccc---------cCH-----------HH-------------
Confidence 46899999999999999999999 9999999998531100 000 00
Q ss_pred cccccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCC-eEEEEEcCCcEEe
Q 024233 96 RINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGD-KVSVVLENGQCYA 174 (270)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~-~~~v~~~~g~~~~ 174 (270)
...+.+.|. ..+.. ++.+++|+++..+++ .+.+.+.+|+++.
T Consensus 234 -----------------------------------~~~l~~~l~-~~GV~-i~~~~~v~~i~~~~~~~~~v~~~~G~~i~ 276 (490)
T 1fec_A 234 -----------------------------------RKQLTEQLR-ANGIN-VRTHENPAKVTKNADGTRHVVFESGAEAD 276 (490)
T ss_dssp -----------------------------------HHHHHHHHH-HTTEE-EEETCCEEEEEECTTSCEEEEETTSCEEE
T ss_pred -----------------------------------HHHHHHHHH-hCCCE-EEeCCEEEEEEEcCCCEEEEEECCCcEEE
Confidence 112222222 23444 888999999987664 4778888998999
Q ss_pred ccEEEecCCCCchh
Q 024233 175 GDLLVGADGIWSKV 188 (270)
Q Consensus 175 ad~vI~AdG~~S~v 188 (270)
+|.||.|.|.++..
T Consensus 277 ~D~vv~a~G~~p~~ 290 (490)
T 1fec_A 277 YDVVMLAIGRVPRS 290 (490)
T ss_dssp ESEEEECSCEEESC
T ss_pred cCEEEEccCCCcCc
Confidence 99999999987654
No 199
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.40 E-value=2.4e-06 Score=75.86 Aligned_cols=100 Identities=26% Similarity=0.325 Sum_probs=73.0
Q ss_pred cceEEEEcCCHHHHHHHHHHHhC---CCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRK---GFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGD 95 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~---g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~ 95 (270)
..+++|||||.+|+-+|..|++. |.+|+|+|+.+..... ++..+
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~--------------------~d~~~------------- 237 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRG--------------------FDETI------------- 237 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTT--------------------SCHHH-------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccc--------------------cCHHH-------------
Confidence 46899999999999999999999 9999999998532100 00000
Q ss_pred cccccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCC-eEEEEEcCCcEEe
Q 024233 96 RINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGD-KVSVVLENGQCYA 174 (270)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~-~~~v~~~~g~~~~ 174 (270)
...+.+.| +..+.. ++.+++|+++..+++ .+.+.+.+|+++.
T Consensus 238 -----------------------------------~~~l~~~l-~~~GV~-i~~~~~v~~i~~~~~~~~~v~~~~G~~i~ 280 (495)
T 2wpf_A 238 -----------------------------------REEVTKQL-TANGIE-IMTNENPAKVSLNTDGSKHVTFESGKTLD 280 (495)
T ss_dssp -----------------------------------HHHHHHHH-HHTTCE-EEESCCEEEEEECTTSCEEEEETTSCEEE
T ss_pred -----------------------------------HHHHHHHH-HhCCCE-EEeCCEEEEEEEcCCceEEEEECCCcEEE
Confidence 11222222 223445 888999999987654 4778888998999
Q ss_pred ccEEEecCCCCchh
Q 024233 175 GDLLVGADGIWSKV 188 (270)
Q Consensus 175 ad~vI~AdG~~S~v 188 (270)
+|.||.|.|..+..
T Consensus 281 ~D~vv~a~G~~p~~ 294 (495)
T 2wpf_A 281 VDVVMMAIGRIPRT 294 (495)
T ss_dssp ESEEEECSCEEECC
T ss_pred cCEEEECCCCcccc
Confidence 99999999987654
No 200
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.40 E-value=2.5e-07 Score=81.32 Aligned_cols=37 Identities=14% Similarity=0.357 Sum_probs=34.4
Q ss_pred CCcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 17 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 17 ~~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
+..+||+|||+|++|+++|+.|+++|++|+|+|+++.
T Consensus 18 ~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~ 54 (475)
T 3p1w_A 18 GEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPY 54 (475)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCC
Confidence 4568999999999999999999999999999999864
No 201
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.40 E-value=3e-06 Score=74.63 Aligned_cols=100 Identities=27% Similarity=0.400 Sum_probs=71.6
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcccc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 98 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 98 (270)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.+..... +.+ .+
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~---------~~~-----------~~---------------- 214 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPN---------EDA-----------DV---------------- 214 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT---------SCH-----------HH----------------
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccccc---------cCH-----------HH----------------
Confidence 468999999999999999999999999999998532100 000 00
Q ss_pred ccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCeEEEEEc-CC--cEEec
Q 024233 99 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLE-NG--QCYAG 175 (270)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~-~g--~~~~a 175 (270)
...+.+.| +..+.. ++.+++|+++..+++++.+.+. +| +++.+
T Consensus 215 --------------------------------~~~l~~~l-~~~gv~-i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~ 260 (464)
T 2a8x_A 215 --------------------------------SKEIEKQF-KKLGVT-ILTATKVESIADGGSQVTVTVTKDGVAQELKA 260 (464)
T ss_dssp --------------------------------HHHHHHHH-HHHTCE-EECSCEEEEEEECSSCEEEEEESSSCEEEEEE
T ss_pred --------------------------------HHHHHHHH-HHcCCE-EEeCcEEEEEEEcCCeEEEEEEcCCceEEEEc
Confidence 01112222 223444 8889999999887777777775 56 67999
Q ss_pred cEEEecCCCCchh
Q 024233 176 DLLVGADGIWSKV 188 (270)
Q Consensus 176 d~vI~AdG~~S~v 188 (270)
|.||.|.|..+..
T Consensus 261 D~vv~a~G~~p~~ 273 (464)
T 2a8x_A 261 EKVLQAIGFAPNV 273 (464)
T ss_dssp SEEEECSCEEECC
T ss_pred CEEEECCCCCccC
Confidence 9999999987543
No 202
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.39 E-value=4.5e-06 Score=73.27 Aligned_cols=99 Identities=14% Similarity=0.072 Sum_probs=70.9
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcccc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 98 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 98 (270)
..+++|||||.+|+-+|..|++.|.+|+++++.+...... +.+. +
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~--------~d~~-----------~---------------- 191 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPKY--------FDKE-----------M---------------- 191 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT--------CCHH-----------H----------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcccccc--------CCHH-----------H----------------
Confidence 4689999999999999999999999999999985321000 0000 0
Q ss_pred ccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCeEEEEEcCCcEEeccEE
Q 024233 99 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLL 178 (270)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~ad~v 178 (270)
...+.+.| ++.+.. ++.+++|++++.+++++.+.++++ ++.||.|
T Consensus 192 --------------------------------~~~l~~~l-~~~GV~-i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~V 236 (452)
T 3oc4_A 192 --------------------------------VAEVQKSL-EKQAVI-FHFEETVLGIEETANGIVLETSEQ-EISCDSG 236 (452)
T ss_dssp --------------------------------HHHHHHHH-HTTTEE-EEETCCEEEEEECSSCEEEEESSC-EEEESEE
T ss_pred --------------------------------HHHHHHHH-HHcCCE-EEeCCEEEEEEccCCeEEEEECCC-EEEeCEE
Confidence 01111111 112334 888999999997777787878777 8999999
Q ss_pred EecCCCCch
Q 024233 179 VGADGIWSK 187 (270)
Q Consensus 179 I~AdG~~S~ 187 (270)
|.|.|....
T Consensus 237 v~A~G~~p~ 245 (452)
T 3oc4_A 237 IFALNLHPQ 245 (452)
T ss_dssp EECSCCBCC
T ss_pred EECcCCCCC
Confidence 999998654
No 203
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.39 E-value=2.3e-07 Score=81.74 Aligned_cols=34 Identities=29% Similarity=0.361 Sum_probs=32.1
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEecc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 51 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~ 51 (270)
..+||+|||||++|+++|+.|+++|++|+|||+.
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~ 37 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEEF 37 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 3589999999999999999999999999999995
No 204
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.38 E-value=3e-07 Score=79.02 Aligned_cols=35 Identities=26% Similarity=0.490 Sum_probs=32.8
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
++||+|||||++|+++|+.|+++|++|+|+|+++.
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~ 37 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDH 37 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCC
Confidence 47999999999999999999999999999999864
No 205
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.38 E-value=2.6e-07 Score=79.00 Aligned_cols=34 Identities=32% Similarity=0.397 Sum_probs=32.2
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
+||+|||||++|+++|+.|+++|++|+|+|+.+.
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~ 35 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNH 35 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCC
Confidence 6999999999999999999999999999999853
No 206
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.38 E-value=2.9e-06 Score=74.91 Aligned_cols=101 Identities=19% Similarity=0.198 Sum_probs=71.4
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcccc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 98 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 98 (270)
+.+|+|||||++|+-+|..|++.|.+|+|+|+.+...... +.+. +
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~--------~~~~-----------~---------------- 222 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVG--------IDME-----------I---------------- 222 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCSS--------CCHH-----------H----------------
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCcc--------cCHH-----------H----------------
Confidence 4689999999999999999999999999999985321000 0000 0
Q ss_pred ccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCe-EEEEE-----cCCcE
Q 024233 99 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDK-VSVVL-----ENGQC 172 (270)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~-~~v~~-----~~g~~ 172 (270)
...+.+.|. ..+.. ++.+++|+++..++++ +.+.+ .++++
T Consensus 223 --------------------------------~~~l~~~l~-~~Gv~-i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~ 268 (474)
T 1zmd_A 223 --------------------------------SKNFQRILQ-KQGFK-FKLNTKVTGATKKSDGKIDVSIEAASGGKAEV 268 (474)
T ss_dssp --------------------------------HHHHHHHHH-HTTCE-EECSEEEEEEEECTTSCEEEEEEETTSCCCEE
T ss_pred --------------------------------HHHHHHHHH-HCCCE-EEeCceEEEEEEcCCceEEEEEEecCCCCceE
Confidence 011222222 23445 8889999999887766 66664 45678
Q ss_pred EeccEEEecCCCCchh
Q 024233 173 YAGDLLVGADGIWSKV 188 (270)
Q Consensus 173 ~~ad~vI~AdG~~S~v 188 (270)
+.+|.||.|.|..+..
T Consensus 269 i~~D~vv~a~G~~p~~ 284 (474)
T 1zmd_A 269 ITCDVLLVCIGRRPFT 284 (474)
T ss_dssp EEESEEEECSCEEECC
T ss_pred EEcCEEEECcCCCcCC
Confidence 9999999999987653
No 207
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.37 E-value=4.5e-06 Score=73.21 Aligned_cols=100 Identities=17% Similarity=0.220 Sum_probs=70.2
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcccc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 98 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 98 (270)
..+|+|||||.+|+-+|..|++.|.+|+++|+.+...... +.+ .+
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~--------~~~-----------~~---------------- 193 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYKY--------FDK-----------EF---------------- 193 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTTT--------SCH-----------HH----------------
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhhh--------hhh-----------hH----------------
Confidence 4689999999999999999999999999999985321100 000 00
Q ss_pred ccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCeEEEEEcCCcEEeccEE
Q 024233 99 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLL 178 (270)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~ad~v 178 (270)
...+.+.| ++.+.. ++.+++|+++..+++++.....+|+++.+|.|
T Consensus 194 --------------------------------~~~l~~~l-~~~Gv~-i~~~~~v~~i~~~~~~v~~v~~~g~~i~~D~v 239 (452)
T 2cdu_A 194 --------------------------------TDILAKDY-EAHGVN-LVLGSKVAAFEEVDDEIITKTLDGKEIKSDIA 239 (452)
T ss_dssp --------------------------------HHHHHHHH-HHTTCE-EEESSCEEEEEEETTEEEEEETTSCEEEESEE
T ss_pred --------------------------------HHHHHHHH-HHCCCE-EEcCCeeEEEEcCCCeEEEEEeCCCEEECCEE
Confidence 01112222 223445 88899999998766666533447889999999
Q ss_pred EecCCCCch
Q 024233 179 VGADGIWSK 187 (270)
Q Consensus 179 I~AdG~~S~ 187 (270)
|.|.|....
T Consensus 240 v~a~G~~p~ 248 (452)
T 2cdu_A 240 ILCIGFRPN 248 (452)
T ss_dssp EECCCEEEC
T ss_pred EECcCCCCC
Confidence 999998654
No 208
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.36 E-value=1.9e-06 Score=75.96 Aligned_cols=100 Identities=23% Similarity=0.327 Sum_probs=71.4
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcccc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 98 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 98 (270)
..+|+|||||++|+-+|..|++.|.+|+|+|+.+..... +.+ .+
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~---------~~~-----------~~---------------- 220 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPT---------MDA-----------EI---------------- 220 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT---------SCH-----------HH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc---------ccH-----------HH----------------
Confidence 468999999999999999999999999999998532100 000 00
Q ss_pred ccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCeEEEEEc---CC--cEE
Q 024233 99 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLE---NG--QCY 173 (270)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~---~g--~~~ 173 (270)
...+.+.|. ..+.. ++.+++|+++..+++++.+.+. +| +++
T Consensus 221 --------------------------------~~~l~~~l~-~~gv~-i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~ 266 (470)
T 1dxl_A 221 --------------------------------RKQFQRSLE-KQGMK-FKLKTKVVGVDTSGDGVKLTVEPSAGGEQTII 266 (470)
T ss_dssp --------------------------------HHHHHHHHH-HSSCC-EECSEEEEEEECSSSSEEEEEEESSSCCCEEE
T ss_pred --------------------------------HHHHHHHHH-HcCCE-EEeCCEEEEEEEcCCeEEEEEEecCCCcceEE
Confidence 111222222 23445 8889999999887766777664 44 689
Q ss_pred eccEEEecCCCCchh
Q 024233 174 AGDLLVGADGIWSKV 188 (270)
Q Consensus 174 ~ad~vI~AdG~~S~v 188 (270)
.+|.||.|.|..+..
T Consensus 267 ~~D~vv~a~G~~p~~ 281 (470)
T 1dxl_A 267 EADVVLVSAGRTPFT 281 (470)
T ss_dssp EESEEECCCCEEECC
T ss_pred ECCEEEECCCCCcCC
Confidence 999999999987653
No 209
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.35 E-value=2.9e-06 Score=75.26 Aligned_cols=100 Identities=25% Similarity=0.334 Sum_probs=71.5
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcccc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 98 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 98 (270)
..+|+|||||.+|+-+|..|++.|.+|+++|+.+..... +.+. +
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~---------~d~~-----------~---------------- 241 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGG---------MDGE-----------V---------------- 241 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSS---------SCHH-----------H----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccccc---------CCHH-----------H----------------
Confidence 468999999999999999999999999999988532110 0000 0
Q ss_pred ccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCeEEEEEcC---C--cEE
Q 024233 99 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLEN---G--QCY 173 (270)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~~---g--~~~ 173 (270)
...+.+.|. ..+.. ++.+++|+++..+++++.+.+.+ | +++
T Consensus 242 --------------------------------~~~l~~~l~-~~gV~-v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i 287 (491)
T 3urh_A 242 --------------------------------AKQLQRMLT-KQGID-FKLGAKVTGAVKSGDGAKVTFEPVKGGEATTL 287 (491)
T ss_dssp --------------------------------HHHHHHHHH-HTTCE-EECSEEEEEEEEETTEEEEEEEETTSCCCEEE
T ss_pred --------------------------------HHHHHHHHH-hCCCE-EEECCeEEEEEEeCCEEEEEEEecCCCceEEE
Confidence 111122221 22444 88899999999888887777753 4 589
Q ss_pred eccEEEecCCCCchh
Q 024233 174 AGDLLVGADGIWSKV 188 (270)
Q Consensus 174 ~ad~vI~AdG~~S~v 188 (270)
.+|.||.|.|.....
T Consensus 288 ~~D~Vi~a~G~~p~~ 302 (491)
T 3urh_A 288 DAEVVLIATGRKPST 302 (491)
T ss_dssp EESEEEECCCCEECC
T ss_pred EcCEEEEeeCCccCC
Confidence 999999999987554
No 210
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.35 E-value=4.6e-07 Score=81.11 Aligned_cols=36 Identities=17% Similarity=0.236 Sum_probs=33.6
Q ss_pred CCcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 17 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 17 ~~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
+..+||+|||||++|+++|+.|++.|++|+|||+.+
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~ 76 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWP 76 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 356899999999999999999999999999999985
No 211
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.34 E-value=3.3e-06 Score=70.68 Aligned_cols=94 Identities=19% Similarity=0.139 Sum_probs=68.6
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcccc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 98 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 98 (270)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+... +
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~-------------~----------------------------- 210 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLR-------------A----------------------------- 210 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC-------------S-----------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccC-------------C-----------------------------
Confidence 4689999999999999999999999999999875310 0
Q ss_pred ccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCeEE-EEEcC-----CcE
Q 024233 99 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVS-VVLEN-----GQC 172 (270)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~-v~~~~-----g~~ 172 (270)
...+.+.|.+..+.. ++.+++|+++..+++++. +.+.+ +.+
T Consensus 211 --------------------------------~~~~~~~l~~~~gv~-i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~ 257 (338)
T 3itj_A 211 --------------------------------STIMQKRAEKNEKIE-ILYNTVALEAKGDGKLLNALRIKNTKKNEETD 257 (338)
T ss_dssp --------------------------------CHHHHHHHHHCTTEE-EECSEEEEEEEESSSSEEEEEEEETTTTEEEE
T ss_pred --------------------------------CHHHHHHHHhcCCeE-EeecceeEEEEcccCcEEEEEEEECCCCceEE
Confidence 011222233322444 788899999988776543 55554 457
Q ss_pred EeccEEEecCCCCch
Q 024233 173 YAGDLLVGADGIWSK 187 (270)
Q Consensus 173 ~~ad~vI~AdG~~S~ 187 (270)
+.+|.||.|.|....
T Consensus 258 i~~D~vi~a~G~~p~ 272 (338)
T 3itj_A 258 LPVSGLFYAIGHTPA 272 (338)
T ss_dssp EECSEEEECSCEEEC
T ss_pred EEeCEEEEEeCCCCC
Confidence 999999999997653
No 212
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.34 E-value=3.9e-06 Score=74.21 Aligned_cols=98 Identities=26% Similarity=0.287 Sum_probs=67.5
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCccc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 97 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~ 97 (270)
...+|+|||||++|+-+|..|++.|.+|+|+|+.+.... .++..+
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~--------------------~~~~~~--------------- 229 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGT--------------------IYDGDM--------------- 229 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTS--------------------SSCHHH---------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhh--------------------cCCHHH---------------
Confidence 457899999999999999999999999999999853110 000000
Q ss_pred cccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCeE-EEEEcCCcEEecc
Q 024233 98 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKV-SVVLENGQCYAGD 176 (270)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~-~v~~~~g~~~~ad 176 (270)
...+.+.| +..+.. ++.+++|+++..+ +++ .+.+ ++.++.+|
T Consensus 230 ---------------------------------~~~l~~~l-~~~Gv~-i~~~~~v~~i~~~-~~v~~v~~-~~~~i~~D 272 (480)
T 3cgb_A 230 ---------------------------------AEYIYKEA-DKHHIE-ILTNENVKAFKGN-ERVEAVET-DKGTYKAD 272 (480)
T ss_dssp ---------------------------------HHHHHHHH-HHTTCE-EECSCCEEEEEES-SBEEEEEE-TTEEEECS
T ss_pred ---------------------------------HHHHHHHH-HHcCcE-EEcCCEEEEEEcC-CcEEEEEE-CCCEEEcC
Confidence 01122222 223444 8889999999875 344 3444 45589999
Q ss_pred EEEecCCCCch
Q 024233 177 LLVGADGIWSK 187 (270)
Q Consensus 177 ~vI~AdG~~S~ 187 (270)
.||.|.|..+.
T Consensus 273 ~vi~a~G~~p~ 283 (480)
T 3cgb_A 273 LVLVSVGVKPN 283 (480)
T ss_dssp EEEECSCEEES
T ss_pred EEEECcCCCcC
Confidence 99999998754
No 213
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.34 E-value=1.8e-06 Score=75.91 Aligned_cols=98 Identities=21% Similarity=0.290 Sum_probs=68.6
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcccc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 98 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 98 (270)
..+|+|||||++|+-+|..|++.|.+|+|+|+.+..... +.+ .+
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~---------~~~-----------~~---------------- 214 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPT---------YDS-----------EL---------------- 214 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT---------SCH-----------HH----------------
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccccc---------cCH-----------HH----------------
Confidence 468999999999999999999999999999998532100 000 00
Q ss_pred ccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCeEEEEEcCC--cEEecc
Q 024233 99 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENG--QCYAGD 176 (270)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~~g--~~~~ad 176 (270)
...+.+.| +..+.. ++.+++|+++.. + ++.+...+| +++.+|
T Consensus 215 --------------------------------~~~l~~~l-~~~gv~-i~~~~~v~~i~~-~-~v~v~~~~G~~~~i~~D 258 (458)
T 1lvl_A 215 --------------------------------TAPVAESL-KKLGIA-LHLGHSVEGYEN-G-CLLANDGKGGQLRLEAD 258 (458)
T ss_dssp --------------------------------HHHHHHHH-HHHTCE-EETTCEEEEEET-T-EEEEECSSSCCCEECCS
T ss_pred --------------------------------HHHHHHHH-HHCCCE-EEECCEEEEEEe-C-CEEEEECCCceEEEECC
Confidence 01122222 223455 888999999976 3 366654456 689999
Q ss_pred EEEecCCCCchh
Q 024233 177 LLVGADGIWSKV 188 (270)
Q Consensus 177 ~vI~AdG~~S~v 188 (270)
.||.|.|..+..
T Consensus 259 ~vv~a~G~~p~~ 270 (458)
T 1lvl_A 259 RVLVAVGRRPRT 270 (458)
T ss_dssp CEEECCCEEECC
T ss_pred EEEECcCCCcCC
Confidence 999999987654
No 214
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.33 E-value=5.1e-06 Score=73.22 Aligned_cols=98 Identities=19% Similarity=0.206 Sum_probs=71.0
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcccc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 98 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 98 (270)
..+|+|||||++|+-+|..|++.|.+|+++|+.+.... ..+. +
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~----------~~~~-----------~---------------- 218 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR----------EDPA-----------I---------------- 218 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT----------SCHH-----------H----------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC----------CCHH-----------H----------------
Confidence 46899999999999999999999999999999853110 0000 0
Q ss_pred ccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCeEEEEEcCCcEEeccEE
Q 024233 99 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLL 178 (270)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~ad~v 178 (270)
...+.+.|. ..+.. ++.+++|+++..+++.+.+.+. +.++.+|.|
T Consensus 219 --------------------------------~~~l~~~l~-~~Gv~-i~~~~~v~~i~~~~~~~~v~~~-~~~i~aD~V 263 (467)
T 1zk7_A 219 --------------------------------GEAVTAAFR-AEGIE-VLEHTQASQVAHMDGEFVLTTT-HGELRADKL 263 (467)
T ss_dssp --------------------------------HHHHHHHHH-HTTCE-EETTCCEEEEEEETTEEEEEET-TEEEEESEE
T ss_pred --------------------------------HHHHHHHHH-hCCCE-EEcCCEEEEEEEeCCEEEEEEC-CcEEEcCEE
Confidence 111222222 23444 8889999999887777777776 458999999
Q ss_pred EecCCCCchh
Q 024233 179 VGADGIWSKV 188 (270)
Q Consensus 179 I~AdG~~S~v 188 (270)
|.|.|.++..
T Consensus 264 v~a~G~~p~~ 273 (467)
T 1zk7_A 264 LVATGRTPNT 273 (467)
T ss_dssp EECSCEEESC
T ss_pred EECCCCCcCC
Confidence 9999998764
No 215
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.33 E-value=5.6e-07 Score=79.10 Aligned_cols=36 Identities=33% Similarity=0.467 Sum_probs=33.5
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
..+||+|||||++|+++|+.|+++|++|+|||+.+.
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~ 156 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDR 156 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCC
Confidence 467999999999999999999999999999999854
No 216
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=98.32 E-value=4.7e-07 Score=80.43 Aligned_cols=53 Identities=19% Similarity=0.270 Sum_probs=43.2
Q ss_pred HHHHHHHHHhcCCccEEeCceEEEEEecCCeEEEEEcCCc----EEeccEEEecCCCC
Q 024233 132 MTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQ----CYAGDLLVGADGIW 185 (270)
Q Consensus 132 ~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~~g~----~~~ad~vI~AdG~~ 185 (270)
..|.+.|.+.++.. |+.+++|++|..+++++.|++.+|+ +++||.||.|.+.+
T Consensus 241 ~~l~~~l~~~l~~~-i~~~~~V~~I~~~~~~v~v~~~~~~~~~~~~~ad~vI~t~p~~ 297 (498)
T 2iid_A 241 DKLPTAMYRDIQDK-VHFNAQVIKIQQNDQKVTVVYETLSKETPSVTADYVIVCTTSR 297 (498)
T ss_dssp THHHHHHHHHTGGG-EESSCEEEEEEECSSCEEEEEECSSSCCCEEEESEEEECSCHH
T ss_pred HHHHHHHHHhcccc-cccCCEEEEEEECCCeEEEEEecCCcccceEEeCEEEECCChH
Confidence 45666666666554 9999999999998889999887765 58999999999975
No 217
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.32 E-value=5.8e-06 Score=73.03 Aligned_cols=100 Identities=26% Similarity=0.243 Sum_probs=72.4
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcccc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 98 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 98 (270)
..+|+|||||++|+-+|..|++.|.+|+++++.+..... +.+ .+
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~---------~~~-----------~~---------------- 223 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPA---------VDE-----------QV---------------- 223 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT---------SCH-----------HH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCcc---------cCH-----------HH----------------
Confidence 468999999999999999999999999999998531100 000 00
Q ss_pred ccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCeEEEEEcCC---cEEec
Q 024233 99 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENG---QCYAG 175 (270)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~~g---~~~~a 175 (270)
...+.+.| +..+.. ++.+++|++++.+++++.+.+.++ +++.+
T Consensus 224 --------------------------------~~~l~~~l-~~~Gv~-v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~ 269 (476)
T 3lad_A 224 --------------------------------AKEAQKIL-TKQGLK-ILLGARVTGTEVKNKQVTVKFVDAEGEKSQAF 269 (476)
T ss_dssp --------------------------------HHHHHHHH-HHTTEE-EEETCEEEEEEECSSCEEEEEESSSEEEEEEE
T ss_pred --------------------------------HHHHHHHH-HhCCCE-EEECCEEEEEEEcCCEEEEEEEeCCCcEEEEC
Confidence 11122222 223444 888999999998888888887765 67999
Q ss_pred cEEEecCCCCchh
Q 024233 176 DLLVGADGIWSKV 188 (270)
Q Consensus 176 d~vI~AdG~~S~v 188 (270)
|.||.|.|.....
T Consensus 270 D~vi~a~G~~p~~ 282 (476)
T 3lad_A 270 DKLIVAVGRRPVT 282 (476)
T ss_dssp SEEEECSCEEECC
T ss_pred CEEEEeeCCcccC
Confidence 9999999986554
No 218
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.32 E-value=5.4e-06 Score=73.61 Aligned_cols=100 Identities=20% Similarity=0.228 Sum_probs=70.9
Q ss_pred cceEEEEcCCHHHHHHHHHHHh----CCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccC
Q 024233 19 KLRILVAGGGIGGLVFALAAKR----KGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTG 94 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~----~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~ 94 (270)
..+|+|||||.+|+-+|..|++ .|.+|+++++.+...... +.+ .+
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~~--------l~~-----------~~------------ 228 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKI--------LPE-----------YL------------ 228 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTT--------SCH-----------HH------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccccccc--------CCH-----------HH------------
Confidence 4689999999999999999987 478899998874210000 000 00
Q ss_pred ccccccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCeEEEEEcCCcEEe
Q 024233 95 DRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYA 174 (270)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~ 174 (270)
...+.+.| ++.+.. ++.+++|+++..+++.+.+.+.+|+++.
T Consensus 229 ------------------------------------~~~~~~~l-~~~GV~-v~~~~~V~~i~~~~~~~~v~l~dG~~i~ 270 (493)
T 1m6i_A 229 ------------------------------------SNWTMEKV-RREGVK-VMPNAIVQSVGVSSGKLLIKLKDGRKVE 270 (493)
T ss_dssp ------------------------------------HHHHHHHH-HTTTCE-EECSCCEEEEEEETTEEEEEETTSCEEE
T ss_pred ------------------------------------HHHHHHHH-HhcCCE-EEeCCEEEEEEecCCeEEEEECCCCEEE
Confidence 01111222 223444 8889999999887777888899999999
Q ss_pred ccEEEecCCCCch
Q 024233 175 GDLLVGADGIWSK 187 (270)
Q Consensus 175 ad~vI~AdG~~S~ 187 (270)
||.||.|.|..+.
T Consensus 271 aD~Vv~a~G~~pn 283 (493)
T 1m6i_A 271 TDHIVAAVGLEPN 283 (493)
T ss_dssp ESEEEECCCEEEC
T ss_pred CCEEEECCCCCcc
Confidence 9999999998754
No 219
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.31 E-value=5.3e-07 Score=76.68 Aligned_cols=33 Identities=33% Similarity=0.406 Sum_probs=31.8
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
+||+|||||++|+.+|+.|+++|.+|+|+|+++
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 699999999999999999999999999999986
No 220
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.30 E-value=8.3e-06 Score=67.57 Aligned_cols=34 Identities=18% Similarity=0.160 Sum_probs=31.7
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 176 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRD 176 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCC
Confidence 4689999999999999999999999999999875
No 221
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.30 E-value=4.8e-07 Score=80.11 Aligned_cols=35 Identities=37% Similarity=0.509 Sum_probs=32.9
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
.++||+|||||++|+++|+.|++.|.+|+|||++.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 46899999999999999999999999999999974
No 222
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.29 E-value=6.4e-07 Score=82.86 Aligned_cols=37 Identities=32% Similarity=0.503 Sum_probs=34.0
Q ss_pred CCcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 17 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 17 ~~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
..++||+|||||++|+++|+.|+++|++|+|||+.+.
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~ 425 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRD 425 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred cccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 4568999999999999999999999999999999853
No 223
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.29 E-value=7.9e-07 Score=77.67 Aligned_cols=56 Identities=20% Similarity=0.106 Sum_probs=44.3
Q ss_pred HHHHHHHHHhc---CCccEEeCceEEEEEecCCeEEEEEcCCcEEeccEEEecCCCCchh
Q 024233 132 MTLQQILAKAV---GDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLVGADGIWSKV 188 (270)
Q Consensus 132 ~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~ad~vI~AdG~~S~v 188 (270)
..+.+.|.+.+ |.. ++.+++|++|..+++++.....+|++++||.||.|.|.++..
T Consensus 234 ~~l~~~l~~~~~~~G~~-i~~~~~V~~I~~~~~~v~~v~~~g~~~~ad~VV~a~~~~~~~ 292 (433)
T 1d5t_A 234 GELPQGFARLSAIYGGT-YMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYVPDR 292 (433)
T ss_dssp THHHHHHHHHHHHHTCC-CBCSCCCCEEEEETTEEEEEEETTEEEECSEEEECGGGCGGG
T ss_pred HHHHHHHHHHHHHcCCE-EECCCEEEEEEEeCCEEEEEEECCeEEECCEEEECCCCCccc
Confidence 46666666543 555 889999999998888877555688899999999999999753
No 224
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.29 E-value=6.8e-06 Score=72.40 Aligned_cols=98 Identities=19% Similarity=0.181 Sum_probs=71.8
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcccc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 98 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 98 (270)
..+|+|||||.+|+-+|..|++.|.+|+++++.+...... +.
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~--------~d------------------------------ 213 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALITL--------ED------------------------------ 213 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTS--------CC------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCCC--------CC------------------------------
Confidence 4689999999999999999999999999999985311000 00
Q ss_pred ccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecC-CeEEEEEc--CCc--EE
Q 024233 99 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHG-DKVSVVLE--NGQ--CY 173 (270)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~-~~~~v~~~--~g~--~~ 173 (270)
.++.+.+.+.+... ++.+++|+++..++ +++.+.+. +|+ ++
T Consensus 214 ---------------------------------~~~~~~l~~~l~v~-i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~i 259 (466)
T 3l8k_A 214 ---------------------------------QDIVNTLLSILKLN-IKFNSPVTEVKKIKDDEYEVIYSTKDGSKKSI 259 (466)
T ss_dssp ---------------------------------HHHHHHHHHHHCCC-EECSCCEEEEEEEETTEEEEEECCTTSCCEEE
T ss_pred ---------------------------------HHHHHHHHhcCEEE-EEECCEEEEEEEcCCCcEEEEEEecCCceEEE
Confidence 01112222222333 78889999998877 78888887 665 89
Q ss_pred eccEEEecCCCCchh
Q 024233 174 AGDLLVGADGIWSKV 188 (270)
Q Consensus 174 ~ad~vI~AdG~~S~v 188 (270)
.+|.||.|.|.....
T Consensus 260 ~~D~vi~a~G~~p~~ 274 (466)
T 3l8k_A 260 FTNSVVLAAGRRPVI 274 (466)
T ss_dssp EESCEEECCCEEECC
T ss_pred EcCEEEECcCCCccc
Confidence 999999999987554
No 225
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.28 E-value=5.9e-07 Score=79.93 Aligned_cols=34 Identities=35% Similarity=0.529 Sum_probs=32.3
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
++||+|||||++|+++|..|++.|++|+|||+..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4899999999999999999999999999999984
No 226
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.28 E-value=8.7e-06 Score=67.69 Aligned_cols=34 Identities=24% Similarity=0.252 Sum_probs=31.7
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 178 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRD 178 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCC
Confidence 4689999999999999999999999999999875
No 227
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.27 E-value=6.9e-07 Score=78.71 Aligned_cols=35 Identities=31% Similarity=0.511 Sum_probs=32.7
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
..+||+|||||++|+++|..|++.|++|+|||+..
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 37 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKA 37 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 35899999999999999999999999999999973
No 228
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.27 E-value=8.2e-06 Score=72.34 Aligned_cols=99 Identities=22% Similarity=0.313 Sum_probs=67.6
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCccc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 97 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~ 97 (270)
...+|+|||||.+|+-+|..|++.|.+|+|+|+.+...... +.+ .+
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~--------~~~-----------~~--------------- 238 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGY--------YDR-----------DL--------------- 238 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT--------SCH-----------HH---------------
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhhH--------HHH-----------HH---------------
Confidence 35689999999999999999999999999999985321000 000 00
Q ss_pred cccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCeE-EEEEcCCcEEecc
Q 024233 98 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKV-SVVLENGQCYAGD 176 (270)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~-~v~~~~g~~~~ad 176 (270)
...+.+.| +..+.. ++.+++|+++.. ++++ .+.+ +|+++.+|
T Consensus 239 ---------------------------------~~~l~~~l-~~~GV~-i~~~~~v~~i~~-~~~v~~v~~-~g~~i~~D 281 (490)
T 2bc0_A 239 ---------------------------------TDLMAKNM-EEHGIQ-LAFGETVKEVAG-NGKVEKIIT-DKNEYDVD 281 (490)
T ss_dssp ---------------------------------HHHHHHHH-HTTTCE-EEETCCEEEEEC-SSSCCEEEE-SSCEEECS
T ss_pred ---------------------------------HHHHHHHH-HhCCeE-EEeCCEEEEEEc-CCcEEEEEE-CCcEEECC
Confidence 01122222 223444 888999999986 3433 2444 67889999
Q ss_pred EEEecCCCCch
Q 024233 177 LLVGADGIWSK 187 (270)
Q Consensus 177 ~vI~AdG~~S~ 187 (270)
.||.|.|....
T Consensus 282 ~Vi~a~G~~p~ 292 (490)
T 2bc0_A 282 MVILAVGFRPN 292 (490)
T ss_dssp EEEECCCEEEC
T ss_pred EEEECCCCCcC
Confidence 99999997654
No 229
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.27 E-value=6.1e-07 Score=78.77 Aligned_cols=35 Identities=26% Similarity=0.368 Sum_probs=32.7
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
.++||+|||||++|+++|+.|++.|++|+|||++.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 37 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKE 37 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCC
Confidence 35899999999999999999999999999999973
No 230
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.26 E-value=6.5e-07 Score=81.71 Aligned_cols=36 Identities=22% Similarity=0.391 Sum_probs=33.2
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
..+||+|||||++|+++|+.|+++|++|+|||+.+.
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~ 80 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEI 80 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCC
Confidence 358999999999999999999999999999999864
No 231
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.24 E-value=7.4e-06 Score=72.09 Aligned_cols=99 Identities=21% Similarity=0.284 Sum_probs=71.7
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcccc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 98 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 98 (270)
..+++|||||.+|+-+|..|++.|.+|+++++.+..... +.+ .+
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~~---------~~~-----------~~---------------- 213 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSR---------FDQ-----------DM---------------- 213 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT---------SCH-----------HH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc---------cCH-----------HH----------------
Confidence 568999999999999999999999999999998531100 000 00
Q ss_pred ccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCe-EEEE-EcCCcEEecc
Q 024233 99 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDK-VSVV-LENGQCYAGD 176 (270)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~-~~v~-~~~g~~~~ad 176 (270)
...+.+.| +..+.. ++.+++|+++..++++ +.+. +.+|+ +.+|
T Consensus 214 --------------------------------~~~l~~~l-~~~Gv~-i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD 258 (463)
T 4dna_A 214 --------------------------------RRGLHAAM-EEKGIR-ILCEDIIQSVSADADGRRVATTMKHGE-IVAD 258 (463)
T ss_dssp --------------------------------HHHHHHHH-HHTTCE-EECSCCEEEEEECTTSCEEEEESSSCE-EEES
T ss_pred --------------------------------HHHHHHHH-HHCCCE-EECCCEEEEEEEcCCCEEEEEEcCCCe-EEeC
Confidence 11122222 223444 8889999999887665 6788 88887 9999
Q ss_pred EEEecCCCCchh
Q 024233 177 LLVGADGIWSKV 188 (270)
Q Consensus 177 ~vI~AdG~~S~v 188 (270)
.||.|.|.++..
T Consensus 259 ~Vv~a~G~~p~~ 270 (463)
T 4dna_A 259 QVMLALGRMPNT 270 (463)
T ss_dssp EEEECSCEEESC
T ss_pred EEEEeeCcccCC
Confidence 999999987653
No 232
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=98.21 E-value=1e-06 Score=79.33 Aligned_cols=37 Identities=24% Similarity=0.432 Sum_probs=33.7
Q ss_pred CCcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 17 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 17 ~~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
...+|++|||||++|+.+|..|++.|++|+|+|+.+.
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGP 41 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CCceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 3568999999999999999999999999999999863
No 233
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.21 E-value=8.9e-07 Score=79.21 Aligned_cols=35 Identities=26% Similarity=0.408 Sum_probs=31.8
Q ss_pred CcceEEEEcCCHHHHHHHHHHHh-CCCcEEEEeccC
Q 024233 18 KKLRILVAGGGIGGLVFALAAKR-KGFEVLVFEKDM 52 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~-~g~~V~viE~~~ 52 (270)
..||+||||||.+|+.+|..|++ .|++|+|||+.+
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~ 51 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGE 51 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSB
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCC
Confidence 46999999999999999999998 678999999975
No 234
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.18 E-value=1.7e-06 Score=80.45 Aligned_cols=37 Identities=22% Similarity=0.310 Sum_probs=34.0
Q ss_pred CCcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 17 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 17 ~~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
...+||+|||||++|+++|+.|+++|++|+|||+.+.
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~ 423 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEK 423 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 3468999999999999999999999999999999854
No 235
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.18 E-value=9.8e-07 Score=77.63 Aligned_cols=34 Identities=32% Similarity=0.569 Sum_probs=32.1
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEecc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 51 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~ 51 (270)
.++||+|||||++|+++|..|++.|++|+|||+.
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 37 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ 37 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEccC
Confidence 4589999999999999999999999999999994
No 236
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.17 E-value=1.4e-05 Score=67.80 Aligned_cols=107 Identities=17% Similarity=0.206 Sum_probs=69.4
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcccc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 98 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 98 (270)
..+|+|||||.+|+-+|..|++.|.+|+++++.+.... + ..++. .
T Consensus 166 ~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~------------~-------~~d~~---------------~- 210 (369)
T 3d1c_A 166 KGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLND------------P-------DADPS---------------V- 210 (369)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCEEEEECC-----------------------------CT---------------T-
T ss_pred CCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCC------------C-------CCCCC---------------c-
Confidence 35899999999999999999999999999999753110 0 00000 0
Q ss_pred ccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcC-CccEEeCceEEEEEecCCeEEEEEcCCcEEe-cc
Q 024233 99 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG-DEIILNESNVIDFKDHGDKVSVVLENGQCYA-GD 176 (270)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~-~~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~-ad 176 (270)
..+. -.+..+.+.|.+ .+ .. ++.+++|+++..+++.+.+.+.+|+++. +|
T Consensus 211 -----------------------~~~~---~~~~~l~~~l~~-~g~v~-~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~d 262 (369)
T 3d1c_A 211 -----------------------RLSP---YTRQRLGNVIKQ-GARIE-MNVHYTVKDIDFNNGQYHISFDSGQSVHTPH 262 (369)
T ss_dssp -----------------------SCCH---HHHHHHHHHHHT-TCCEE-EECSCCEEEEEEETTEEEEEESSSCCEEESS
T ss_pred -----------------------cCCH---HHHHHHHHHHhh-CCcEE-EecCcEEEEEEecCCceEEEecCCeEeccCC
Confidence 0000 001222332222 22 44 7888999999877777888888887775 59
Q ss_pred EEEecCCCCchh
Q 024233 177 LLVGADGIWSKV 188 (270)
Q Consensus 177 ~vI~AdG~~S~v 188 (270)
.||.|.|.....
T Consensus 263 ~vi~a~G~~~~~ 274 (369)
T 3d1c_A 263 EPILATGFDATK 274 (369)
T ss_dssp CCEECCCBCGGG
T ss_pred ceEEeeccCCcc
Confidence 999999986543
No 237
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.16 E-value=1.6e-05 Score=69.73 Aligned_cols=97 Identities=21% Similarity=0.313 Sum_probs=66.7
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCccccc
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRING 99 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~ 99 (270)
.+|+|||||.+|+-+|..|++.|.+|+++++.+...... +.+. +
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~--------~~~~-----------~----------------- 192 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRRS--------FDKE-----------V----------------- 192 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT--------SCHH-----------H-----------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhh--------cCHH-----------H-----------------
Confidence 589999999999999999999999999999985311000 0000 0
Q ss_pred cccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCeEEEEEcCCcEEeccEEE
Q 024233 100 LVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLV 179 (270)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~ad~vI 179 (270)
...+.+.|.+. .. ++.+++|+++..++ ++...+.+++++.+|.||
T Consensus 193 -------------------------------~~~l~~~l~~~--v~-i~~~~~v~~i~~~~-~v~~v~~~g~~i~~D~Vv 237 (449)
T 3kd9_A 193 -------------------------------TDILEEKLKKH--VN-LRLQEITMKIEGEE-RVEKVVTDAGEYKAELVI 237 (449)
T ss_dssp -------------------------------HHHHHHHHTTT--SE-EEESCCEEEEECSS-SCCEEEETTEEEECSEEE
T ss_pred -------------------------------HHHHHHHHHhC--cE-EEeCCeEEEEeccC-cEEEEEeCCCEEECCEEE
Confidence 11122222221 33 77888999987654 444445677899999999
Q ss_pred ecCCCCch
Q 024233 180 GADGIWSK 187 (270)
Q Consensus 180 ~AdG~~S~ 187 (270)
.|.|....
T Consensus 238 ~a~G~~p~ 245 (449)
T 3kd9_A 238 LATGIKPN 245 (449)
T ss_dssp ECSCEEEC
T ss_pred EeeCCccC
Confidence 99998643
No 238
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.15 E-value=2.2e-05 Score=65.48 Aligned_cols=34 Identities=21% Similarity=0.249 Sum_probs=31.6
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 185 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRD 185 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCC
Confidence 3589999999999999999999999999999875
No 239
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.14 E-value=1.6e-05 Score=72.05 Aligned_cols=97 Identities=23% Similarity=0.330 Sum_probs=69.2
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcccc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 98 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 98 (270)
..+|+|||||.+|+-+|..|++.|.+|+++++.+..... +.+. +
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~---------~~~~-----------~---------------- 230 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP---------IDYE-----------M---------------- 230 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT---------SCHH-----------H----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccccc---------CCHH-----------H----------------
Confidence 468999999999999999999999999999987531100 0000 0
Q ss_pred ccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCeEEEEEcCCcEEeccEE
Q 024233 99 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLL 178 (270)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~ad~v 178 (270)
...+.+.| +..+.. ++.+++|+++..++++ +.+.+|+++.+|.|
T Consensus 231 --------------------------------~~~l~~~l-~~~GV~-i~~~~~v~~i~~~~~~--v~~~~g~~i~~D~V 274 (588)
T 3ics_A 231 --------------------------------AAYVHEHM-KNHDVE-LVFEDGVDALEENGAV--VRLKSGSVIQTDML 274 (588)
T ss_dssp --------------------------------HHHHHHHH-HHTTCE-EECSCCEEEEEGGGTE--EEETTSCEEECSEE
T ss_pred --------------------------------HHHHHHHH-HHcCCE-EEECCeEEEEecCCCE--EEECCCCEEEcCEE
Confidence 11122222 223444 8888999999876554 56678889999999
Q ss_pred EecCCCCch
Q 024233 179 VGADGIWSK 187 (270)
Q Consensus 179 I~AdG~~S~ 187 (270)
|.|.|..+.
T Consensus 275 i~a~G~~p~ 283 (588)
T 3ics_A 275 ILAIGVQPE 283 (588)
T ss_dssp EECSCEEEC
T ss_pred EEccCCCCC
Confidence 999998654
No 240
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=98.13 E-value=2.3e-06 Score=75.54 Aligned_cols=57 Identities=16% Similarity=0.086 Sum_probs=46.2
Q ss_pred HHHHHHHHHhcCC----------ccEEeCceEEEEEecCCeEEEEEcCCcEEeccEEEecCCCCchh
Q 024233 132 MTLQQILAKAVGD----------EIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLVGADGIWSKV 188 (270)
Q Consensus 132 ~~l~~~L~~~~~~----------~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~ad~vI~AdG~~S~v 188 (270)
..+.+.|.+.+.. ..|+.+++|++|..+++++.|++.+|++++||.||.|.+.+...
T Consensus 206 ~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~l~ 272 (472)
T 1b37_A 206 EAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGGVTVKTEDNSVYSADYVMVSASLGVLQ 272 (472)
T ss_dssp THHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSCEEEEETTSCEEEESEEEECSCHHHHH
T ss_pred HHHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCcEEEEECCCCEEEcCEEEEecCHHHhc
Confidence 3666777766421 24999999999999989999999999899999999999975443
No 241
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.12 E-value=1.9e-06 Score=78.36 Aligned_cols=34 Identities=29% Similarity=0.469 Sum_probs=32.0
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEecc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 51 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~ 51 (270)
..+||+|||||++|+++|..|+++|++|+|||+.
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 4589999999999999999999999999999984
No 242
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.11 E-value=1e-05 Score=69.07 Aligned_cols=34 Identities=24% Similarity=0.400 Sum_probs=31.9
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
.+|+|||||++|+-+|..|++.|.+|+++|+.+.
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 177 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAM 177 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCe
Confidence 6899999999999999999999999999999853
No 243
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.11 E-value=2.6e-06 Score=78.49 Aligned_cols=37 Identities=32% Similarity=0.583 Sum_probs=33.8
Q ss_pred CCcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 17 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 17 ~~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
...+||+|||||++|+++|..|+++|++|+|||+.+.
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~ 407 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSE 407 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 3468999999999999999999999999999999854
No 244
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.11 E-value=3.7e-05 Score=63.57 Aligned_cols=93 Identities=15% Similarity=0.084 Sum_probs=66.7
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcccc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 98 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 98 (270)
..+|+|||+|..|+-+|..|++.|.+|+++++.+... ..
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~-----------~~------------------------------ 185 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFR-----------AA------------------------------ 185 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCB-----------SC------------------------------
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCC-----------CC------------------------------
Confidence 4689999999999999999999999999999875310 00
Q ss_pred ccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCeEE-EEEc--CCc--EE
Q 024233 99 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVS-VVLE--NGQ--CY 173 (270)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~-v~~~--~g~--~~ 173 (270)
..+.+.+.+..+.. ++.+++++++..+++++. +.+. +|+ ++
T Consensus 186 ---------------------------------~~~~~~~~~~~gv~-~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~ 231 (315)
T 3r9u_A 186 ---------------------------------PSTVEKVKKNEKIE-LITSASVDEVYGDKMGVAGVKVKLKDGSIRDL 231 (315)
T ss_dssp ---------------------------------HHHHHHHHHCTTEE-EECSCEEEEEEEETTEEEEEEEECTTSCEEEE
T ss_pred ---------------------------------HHHHHHHHhcCCeE-EEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEe
Confidence 01111112223334 788999999988775533 4444 775 79
Q ss_pred eccEEEecCCCCc
Q 024233 174 AGDLLVGADGIWS 186 (270)
Q Consensus 174 ~ad~vI~AdG~~S 186 (270)
.+|.||.|.|...
T Consensus 232 ~~D~vv~a~G~~p 244 (315)
T 3r9u_A 232 NVPGIFTFVGLNV 244 (315)
T ss_dssp CCSCEEECSCEEE
T ss_pred ecCeEEEEEcCCC
Confidence 9999999999754
No 245
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.11 E-value=2.2e-05 Score=65.60 Aligned_cols=34 Identities=21% Similarity=0.245 Sum_probs=31.9
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~ 192 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRD 192 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCeEEEECCChHHHHHHHHHHhcCCeEEEEecCC
Confidence 4689999999999999999999999999999985
No 246
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=98.10 E-value=3e-06 Score=77.98 Aligned_cols=37 Identities=24% Similarity=0.446 Sum_probs=33.9
Q ss_pred CCcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 17 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 17 ~~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
...+||+|||||++|+++|+.|+++|++|+|+|+.+.
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~ 141 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDR 141 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 3457999999999999999999999999999999854
No 247
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.10 E-value=2.4e-05 Score=69.10 Aligned_cols=100 Identities=21% Similarity=0.142 Sum_probs=69.5
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcccc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 98 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 98 (270)
..+|+|||||.+|+-+|..|++.|.+|+++++.+..... +.+ .+
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~---------~d~-----------~~---------------- 230 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRS---------FDS-----------MI---------------- 230 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT---------SCH-----------HH----------------
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccccc---------cCH-----------HH----------------
Confidence 468999999999999999999999999999997532100 000 00
Q ss_pred ccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCe--EEEEEcC---C---
Q 024233 99 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDK--VSVVLEN---G--- 170 (270)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~--~~v~~~~---g--- 170 (270)
...+.+.| +..+.. ++.+++|++++.++++ +.+.+.+ +
T Consensus 231 --------------------------------~~~~~~~l-~~~gv~-i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~ 276 (478)
T 3dk9_A 231 --------------------------------STNCTEEL-ENAGVE-VLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVM 276 (478)
T ss_dssp --------------------------------HHHHHHHH-HHTTCE-EETTEEEEEEEECSSSEEEEEEECCTTSCCEE
T ss_pred --------------------------------HHHHHHHH-HHCCCE-EEeCCEEEEEEEcCCCcEEEEEEccCCCCccc
Confidence 11122222 223444 8888999999876555 6677764 2
Q ss_pred -cEEeccEEEecCCCCchh
Q 024233 171 -QCYAGDLLVGADGIWSKV 188 (270)
Q Consensus 171 -~~~~ad~vI~AdG~~S~v 188 (270)
.++.+|.||.|.|.....
T Consensus 277 g~~~~~D~vi~a~G~~p~~ 295 (478)
T 3dk9_A 277 TMIPDVDCLLWAIGRVPNT 295 (478)
T ss_dssp EEEEEESEEEECSCEEESC
T ss_pred ceEEEcCEEEEeeccccCC
Confidence 579999999999976543
No 248
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.10 E-value=2.8e-05 Score=65.11 Aligned_cols=34 Identities=21% Similarity=0.359 Sum_probs=31.8
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~ 185 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTARRITLIHRRP 185 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCC
Confidence 4689999999999999999999999999999985
No 249
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.09 E-value=2.5e-05 Score=64.60 Aligned_cols=34 Identities=26% Similarity=0.242 Sum_probs=31.7
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
..+|+|||+|++|+-+|..|++.|.+|+++++.+
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 177 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAP 177 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCc
Confidence 4689999999999999999999999999999885
No 250
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.09 E-value=2.1e-06 Score=76.33 Aligned_cols=32 Identities=31% Similarity=0.449 Sum_probs=30.7
Q ss_pred cceEEEEcCCHHHHHHHHHHHh-CCCcEEEEec
Q 024233 19 KLRILVAGGGIGGLVFALAAKR-KGFEVLVFEK 50 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~-~g~~V~viE~ 50 (270)
.+||+|||||++|+++|+.|++ .|++|+|||+
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 39 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDV 39 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCCeEEEEec
Confidence 5899999999999999999999 9999999994
No 251
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=98.08 E-value=1.9e-06 Score=75.70 Aligned_cols=36 Identities=17% Similarity=0.199 Sum_probs=33.0
Q ss_pred CcceEEEEcCCHHHHHHHHHHHh-C------CCcEEEEeccCc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKR-K------GFEVLVFEKDMS 53 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~-~------g~~V~viE~~~~ 53 (270)
.++||+|||||++|+++|..|++ + |.+|+|||+.+.
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~ 44 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPT 44 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCC
Confidence 35799999999999999999999 7 999999999864
No 252
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=98.08 E-value=4e-06 Score=78.86 Aligned_cols=37 Identities=24% Similarity=0.446 Sum_probs=33.8
Q ss_pred CCcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 17 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 17 ~~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
...++|+|||||++||++|+.|+++|++|+|||+...
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~ 312 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDR 312 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCc
Confidence 3457999999999999999999999999999999854
No 253
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.03 E-value=3.4e-05 Score=63.95 Aligned_cols=94 Identities=20% Similarity=0.113 Sum_probs=67.2
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcccc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 98 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 98 (270)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+.... .+
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~-----------~~----------------------------- 193 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA-----------QP----------------------------- 193 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS-----------CH-----------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc-----------CH-----------------------------
Confidence 46899999999999999999999999999998853110 00
Q ss_pred ccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCeEEEEEcC---Cc--EE
Q 024233 99 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLEN---GQ--CY 173 (270)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~~---g~--~~ 173 (270)
.+.+.+.+..+.. ++.+++++++..++....+.+.+ |+ ++
T Consensus 194 ----------------------------------~~~~~~~~~~gv~-~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~ 238 (323)
T 3f8d_A 194 ----------------------------------IYVETVKKKPNVE-FVLNSVVKEIKGDKVVKQVVVENLKTGEIKEL 238 (323)
T ss_dssp ----------------------------------HHHHHHHTCTTEE-EECSEEEEEEEESSSEEEEEEEETTTCCEEEE
T ss_pred ----------------------------------HHHHHHHhCCCcE-EEeCCEEEEEeccCceeEEEEEECCCCceEEE
Confidence 0111122222333 77888899998775544566654 65 79
Q ss_pred eccEEEecCCCCch
Q 024233 174 AGDLLVGADGIWSK 187 (270)
Q Consensus 174 ~ad~vI~AdG~~S~ 187 (270)
.+|.||.|.|....
T Consensus 239 ~~D~vv~a~G~~p~ 252 (323)
T 3f8d_A 239 NVNGVFIEIGFDPP 252 (323)
T ss_dssp ECSEEEECCCEECC
T ss_pred EcCEEEEEECCCCC
Confidence 99999999997654
No 254
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.01 E-value=8.6e-05 Score=66.59 Aligned_cols=36 Identities=19% Similarity=0.146 Sum_probs=33.4
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
...+|+|||+|.+|+-+|..|++.|.+|++++|.+.
T Consensus 177 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 177 AGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred ccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 457899999999999999999999999999999875
No 255
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.00 E-value=7.1e-05 Score=66.14 Aligned_cols=98 Identities=22% Similarity=0.234 Sum_probs=67.9
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcccc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 98 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 98 (270)
..+++|||||.+|+-+|..|++.|.+|+++++... ... +.+ .+
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~-l~~---------~d~-----------~~---------------- 229 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIV-LRG---------FDQ-----------QM---------------- 229 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCS-STT---------SCH-----------HH----------------
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC-Ccc---------cCH-----------HH----------------
Confidence 45899999999999999999999999999988521 000 000 00
Q ss_pred ccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCC-eEEEEEcCCc-----E
Q 024233 99 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGD-KVSVVLENGQ-----C 172 (270)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~-~~~v~~~~g~-----~ 172 (270)
...+.+.| +..+.. ++.+++|+++..+++ .+.+.+.++. +
T Consensus 230 --------------------------------~~~l~~~l-~~~Gv~-i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~ 275 (483)
T 3dgh_A 230 --------------------------------AELVAASM-EERGIP-FLRKTVPLSVEKQDDGKLLVKYKNVETGEESE 275 (483)
T ss_dssp --------------------------------HHHHHHHH-HHTTCC-EEETEEEEEEEECTTSCEEEEEEETTTCCEEE
T ss_pred --------------------------------HHHHHHHH-HhCCCE-EEeCCEEEEEEEcCCCcEEEEEecCCCCceeE
Confidence 01112222 223444 888999999987554 4667776653 7
Q ss_pred EeccEEEecCCCCch
Q 024233 173 YAGDLLVGADGIWSK 187 (270)
Q Consensus 173 ~~ad~vI~AdG~~S~ 187 (270)
+.+|.||.|.|....
T Consensus 276 ~~~D~vi~a~G~~p~ 290 (483)
T 3dgh_A 276 DVYDTVLWAIGRKGL 290 (483)
T ss_dssp EEESEEEECSCEEEC
T ss_pred EEcCEEEECcccccC
Confidence 999999999998654
No 256
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.00 E-value=2.4e-05 Score=66.30 Aligned_cols=34 Identities=18% Similarity=0.380 Sum_probs=31.7
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~ 196 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGH 196 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC
Confidence 4689999999999999999999999999999875
No 257
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=98.00 E-value=3.1e-06 Score=75.94 Aligned_cols=35 Identities=26% Similarity=0.476 Sum_probs=32.6
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
..+|++|||||.+|+.+|..|++ |.+|+|||+.+.
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~ 59 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSL 59 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBC
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCC
Confidence 45899999999999999999999 999999999854
No 258
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.99 E-value=5.1e-06 Score=75.01 Aligned_cols=36 Identities=22% Similarity=0.409 Sum_probs=33.2
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCC-CcEEEEeccCc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKG-FEVLVFEKDMS 53 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g-~~V~viE~~~~ 53 (270)
..+|+||||||.+||.+|..|++.| .+|+|||+.+.
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 4699999999999999999999998 69999999865
No 259
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.99 E-value=4.7e-06 Score=80.31 Aligned_cols=35 Identities=26% Similarity=0.448 Sum_probs=32.6
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCC-cEEEEeccC
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 52 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~-~V~viE~~~ 52 (270)
..+||+|||||++|+++|+.|+++|+ +|+|||+.+
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~ 221 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQE 221 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 46799999999999999999999999 799999975
No 260
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.99 E-value=7.8e-05 Score=61.94 Aligned_cols=34 Identities=24% Similarity=0.294 Sum_probs=31.4
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
..+|+|||||.+|+-+|..|++.|.+|+++++.+
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~ 188 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMP 188 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCC
Confidence 3689999999999999999999999999999874
No 261
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.97 E-value=6.1e-05 Score=65.74 Aligned_cols=94 Identities=12% Similarity=0.164 Sum_probs=65.9
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcccc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 98 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 98 (270)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.+...... .+ ..
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~~---------d~-----------~~---------------- 190 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLM---------DA-----------DM---------------- 190 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTTS---------CG-----------GG----------------
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeeccccccc---------cc-----------hh----------------
Confidence 4589999999999999999999999999999985321100 00 00
Q ss_pred ccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCeEEEEEcCCcEEeccEE
Q 024233 99 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLL 178 (270)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~ad~v 178 (270)
...+.+.| +..+.. ++.+++|+++.. + .+.+++|+++.+|.|
T Consensus 191 --------------------------------~~~~~~~l-~~~gV~-i~~~~~v~~~~~--~--~v~~~~g~~~~~D~v 232 (437)
T 4eqs_A 191 --------------------------------NQPILDEL-DKREIP-YRLNEEINAING--N--EITFKSGKVEHYDMI 232 (437)
T ss_dssp --------------------------------GHHHHHHH-HHTTCC-EEESCCEEEEET--T--EEEETTSCEEECSEE
T ss_pred --------------------------------HHHHHHHh-hccceE-EEeccEEEEecC--C--eeeecCCeEEeeeeE
Confidence 11122222 223444 777888887743 2 367789999999999
Q ss_pred EecCCCCc
Q 024233 179 VGADGIWS 186 (270)
Q Consensus 179 I~AdG~~S 186 (270)
|.|.|...
T Consensus 233 l~a~G~~P 240 (437)
T 4eqs_A 233 IEGVGTHP 240 (437)
T ss_dssp EECCCEEE
T ss_pred EEEeceec
Confidence 99999754
No 262
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.96 E-value=5.4e-06 Score=72.95 Aligned_cols=37 Identities=24% Similarity=0.341 Sum_probs=33.0
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCC--CcEEEEeccCcc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKG--FEVLVFEKDMSA 54 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g--~~V~viE~~~~~ 54 (270)
.++||+|||||++|+.+|..|+++| ++|+|||+.+..
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~ 43 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVP 43 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSS
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcC
Confidence 3579999999999999999999998 999999998643
No 263
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.96 E-value=4.7e-05 Score=63.83 Aligned_cols=34 Identities=24% Similarity=0.181 Sum_probs=31.7
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~ 188 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRD 188 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCC
Confidence 4689999999999999999999999999999874
No 264
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.96 E-value=5.3e-06 Score=79.45 Aligned_cols=35 Identities=31% Similarity=0.524 Sum_probs=32.9
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
.+||+|||||++|+++|+.|+++|++|+|||+.+.
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~ 162 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAE 162 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCC
Confidence 57999999999999999999999999999999854
No 265
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.93 E-value=6e-06 Score=74.55 Aligned_cols=36 Identities=31% Similarity=0.544 Sum_probs=32.9
Q ss_pred CCcceEEEEcCCHHHHHHHHHHHhC-CCcEEEEeccC
Q 024233 17 NKKLRILVAGGGIGGLVFALAAKRK-GFEVLVFEKDM 52 (270)
Q Consensus 17 ~~~~dV~IIGgG~aGl~~A~~La~~-g~~V~viE~~~ 52 (270)
...+|+||||||.+||.+|..|++. +.+|+|||+.+
T Consensus 17 ~~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 17 GRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 3569999999999999999999975 88999999986
No 266
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.93 E-value=9.9e-06 Score=72.14 Aligned_cols=36 Identities=31% Similarity=0.477 Sum_probs=33.6
Q ss_pred CCcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 17 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 17 ~~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
...+|++|||+|++|+.+|..|++.|.+|+|+|+..
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~ 44 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGR 44 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCC
Confidence 456899999999999999999999999999999975
No 267
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.91 E-value=0.00012 Score=64.82 Aligned_cols=33 Identities=21% Similarity=0.180 Sum_probs=30.9
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEecc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 51 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~ 51 (270)
+.+|+|||||.+|+-+|..|++.|.+|+++++.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~ 217 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRS 217 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcC
Confidence 457999999999999999999999999999986
No 268
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.90 E-value=4.7e-06 Score=76.56 Aligned_cols=34 Identities=32% Similarity=0.619 Sum_probs=32.1
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCC--------CcEEEEeccC
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKG--------FEVLVFEKDM 52 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g--------~~V~viE~~~ 52 (270)
.++|+|||||++||++|+.|+++| ++|+|||+++
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~ 97 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADP 97 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccC
Confidence 479999999999999999999998 9999999986
No 269
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.90 E-value=4.6e-05 Score=66.66 Aligned_cols=35 Identities=11% Similarity=-0.043 Sum_probs=32.0
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCc-EEEEeccC
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFE-VLVFEKDM 52 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~-V~viE~~~ 52 (270)
...+|+|||||.+|+=+|..|++.|.+ |+++++.+
T Consensus 211 ~~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~ 246 (447)
T 2gv8_A 211 VGESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGG 246 (447)
T ss_dssp TTCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred CCCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCC
Confidence 346899999999999999999999998 99999874
No 270
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.90 E-value=9.3e-06 Score=72.26 Aligned_cols=35 Identities=29% Similarity=0.382 Sum_probs=33.0
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
..+|++|||+|++|+.+|+.|++.|++|+|+|+..
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~ 38 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQ 38 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 45899999999999999999999999999999975
No 271
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.85 E-value=1.3e-05 Score=72.63 Aligned_cols=37 Identities=35% Similarity=0.561 Sum_probs=33.8
Q ss_pred CCcceEEEEcCCHHHHHHHHHHHh-CCCcEEEEeccCc
Q 024233 17 NKKLRILVAGGGIGGLVFALAAKR-KGFEVLVFEKDMS 53 (270)
Q Consensus 17 ~~~~dV~IIGgG~aGl~~A~~La~-~g~~V~viE~~~~ 53 (270)
+..+|++|||+|++|+++|..|++ .|.+|+|||+...
T Consensus 22 ~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~ 59 (587)
T 1gpe_A 22 GKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFY 59 (587)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCC
T ss_pred cccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCc
Confidence 356899999999999999999999 7999999999854
No 272
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.85 E-value=0.00016 Score=64.91 Aligned_cols=36 Identities=25% Similarity=0.330 Sum_probs=33.4
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
..++|+|||+|.+|+-+|..|++.+.+|+|++|.+.
T Consensus 184 ~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 184 TGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp BTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred CCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 457899999999999999999999999999999974
No 273
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=97.81 E-value=8.8e-06 Score=73.30 Aligned_cols=35 Identities=31% Similarity=0.429 Sum_probs=32.2
Q ss_pred cceEEEEcCCHHHHHHHHHHHh-CCCcEEEEeccCc
Q 024233 19 KLRILVAGGGIGGLVFALAAKR-KGFEVLVFEKDMS 53 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~-~g~~V~viE~~~~ 53 (270)
.+|++|||||.+||.+|..|++ .|.+|+|||+.+.
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~ 37 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVS 37 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCc
Confidence 4899999999999999999999 6899999999753
No 274
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=97.79 E-value=1.7e-05 Score=71.28 Aligned_cols=36 Identities=22% Similarity=0.390 Sum_probs=33.3
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhC-CCcEEEEeccCc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRK-GFEVLVFEKDMS 53 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~-g~~V~viE~~~~ 53 (270)
..+|++|||||++|+.+|..|++. |.+|+|||+...
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~ 48 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPD 48 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCc
Confidence 468999999999999999999998 899999999853
No 275
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.68 E-value=0.00025 Score=62.34 Aligned_cols=34 Identities=12% Similarity=0.094 Sum_probs=31.9
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
..+|+|||||.+|+-+|..|++.|.+|+++++.+
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~ 230 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRT 230 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSS
T ss_pred CCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECC
Confidence 4689999999999999999999999999999875
No 276
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.66 E-value=0.00015 Score=65.17 Aligned_cols=36 Identities=19% Similarity=0.308 Sum_probs=33.4
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
...+|+|||+|.+|+-+|..|++.+.+|++|+|.+.
T Consensus 190 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 190 TGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 457899999999999999999999999999999874
No 277
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.64 E-value=6.9e-05 Score=54.58 Aligned_cols=37 Identities=16% Similarity=0.163 Sum_probs=33.4
Q ss_pred CCcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 17 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 17 ~~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
..+..|+|||.|..|..+|..|.+.|++|+++|+++.
T Consensus 5 ~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 41 (140)
T 3fwz_A 5 DICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRT 41 (140)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 3445899999999999999999999999999999864
No 278
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.64 E-value=5.3e-05 Score=68.78 Aligned_cols=36 Identities=25% Similarity=0.403 Sum_probs=34.1
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
+.+||+|||+|+.|+.+|..|++.|.+|+++||++.
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~ 42 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSY 42 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCc
Confidence 469999999999999999999999999999999964
No 279
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.63 E-value=0.00068 Score=61.52 Aligned_cols=33 Identities=24% Similarity=0.136 Sum_probs=30.9
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEecc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 51 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~ 51 (270)
..+|+|||||.+|+-+|..|++.|.+|+|+++.
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 357999999999999999999999999999987
No 280
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.62 E-value=0.00032 Score=58.25 Aligned_cols=34 Identities=24% Similarity=0.328 Sum_probs=31.7
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~ 187 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRD 187 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSS
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecC
Confidence 4689999999999999999999999999999875
No 281
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.62 E-value=0.00064 Score=60.61 Aligned_cols=33 Identities=24% Similarity=0.210 Sum_probs=30.7
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEecc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 51 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~ 51 (270)
+.+|+|||||.+|+-+|..|++.|.+|+|+++.
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 357999999999999999999999999999985
No 282
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.61 E-value=0.00026 Score=57.82 Aligned_cols=33 Identities=21% Similarity=0.183 Sum_probs=30.3
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
..+|+|||+|.+|+-+|..|++.| +|+++++.+
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~ 173 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGI 173 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTT
T ss_pred CCEEEEEecCccHHHHHHHhhhcC-cEEEEECCC
Confidence 468999999999999999999999 999998764
No 283
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.57 E-value=0.00043 Score=61.79 Aligned_cols=34 Identities=26% Similarity=0.242 Sum_probs=31.7
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
..+|+|||||.+|+-+|..|++.|.+|+++++.+
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~ 388 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAP 388 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCc
Confidence 4689999999999999999999999999999875
No 284
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=97.52 E-value=9.2e-05 Score=53.86 Aligned_cols=34 Identities=21% Similarity=0.307 Sum_probs=31.7
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
..|+|+|+|..|..+|..|+++|++|+++|+++.
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~ 40 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKE 40 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 4899999999999999999999999999999853
No 285
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.49 E-value=0.00029 Score=65.09 Aligned_cols=98 Identities=16% Similarity=0.086 Sum_probs=66.9
Q ss_pred cceEEEEc--CCHHHHHHHHHHHhCCCcEEEEeccCccccCCCCcccceeechhHHHHHHHcCcChHHHHHHhccccCcc
Q 024233 19 KLRILVAG--GGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 96 (270)
Q Consensus 19 ~~dV~IIG--gG~aGl~~A~~La~~g~~V~viE~~~~~~~~~g~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~ 96 (270)
..+|+||| ||.+|+-+|..|++.|.+|+++++.+...... .+. .
T Consensus 523 g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~---------~~~----------~--------------- 568 (690)
T 3k30_A 523 GKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWT---------NNT----------F--------------- 568 (690)
T ss_dssp SSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGG---------GGG----------T---------------
T ss_pred CCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccccccccc---------ccc----------h---------------
Confidence 35799999 99999999999999999999999875311000 000 0
Q ss_pred ccccccCCCCceeEeecCCcccccCCCCeEEEEeHHHHHHHHHHhcCCccEEeCceEEEEEecCCeEEEEE---cCCcEE
Q 024233 97 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVL---ENGQCY 173 (270)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~~---~~g~~~ 173 (270)
....+.+.|.+ .+.. ++.+++|+++..+ ++.+.. .+++++
T Consensus 569 ---------------------------------~~~~l~~~l~~-~GV~-i~~~~~V~~i~~~--~~~v~~~~~~~~~~i 611 (690)
T 3k30_A 569 ---------------------------------EVNRIQRRLIE-NGVA-RVTDHAVVAVGAG--GVTVRDTYASIEREL 611 (690)
T ss_dssp ---------------------------------CHHHHHHHHHH-TTCE-EEESEEEEEEETT--EEEEEETTTCCEEEE
T ss_pred ---------------------------------hHHHHHHHHHH-CCCE-EEcCcEEEEEECC--eEEEEEccCCeEEEE
Confidence 02233333333 3555 8889999999653 444443 245689
Q ss_pred eccEEEecCCCCch
Q 024233 174 AGDLLVGADGIWSK 187 (270)
Q Consensus 174 ~ad~vI~AdG~~S~ 187 (270)
.||.||.|.|..+.
T Consensus 612 ~aD~VV~A~G~~p~ 625 (690)
T 3k30_A 612 ECDAVVMVTARLPR 625 (690)
T ss_dssp ECSEEEEESCEEEC
T ss_pred ECCEEEECCCCCCC
Confidence 99999999998643
No 286
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=97.48 E-value=8.8e-05 Score=61.65 Aligned_cols=38 Identities=21% Similarity=0.414 Sum_probs=32.0
Q ss_pred CCCcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 16 ENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 16 ~~~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
.+...+|+|||+|..|...|..++.+|++|+++|.++.
T Consensus 3 ~p~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~ 40 (319)
T 3ado_A 3 SPAAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp ----CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCCCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 33446899999999999999999999999999999853
No 287
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.48 E-value=0.00045 Score=61.32 Aligned_cols=43 Identities=14% Similarity=0.069 Sum_probs=29.8
Q ss_pred cCCccEEeCceEEEEEecCCeEEEEEcCC----cEEeccEEEecCCCC
Q 024233 142 VGDEIILNESNVIDFKDHGDKVSVVLENG----QCYAGDLLVGADGIW 185 (270)
Q Consensus 142 ~~~~~i~~~~~v~~i~~~~~~~~v~~~~g----~~~~ad~vI~AdG~~ 185 (270)
.+.+ ++.+++|+++..+.........+| +++.||.||.|.|..
T Consensus 285 ~GV~-v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~ 331 (502)
T 4g6h_A 285 TSIK-VHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNK 331 (502)
T ss_dssp TTCE-EETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCEE
T ss_pred ccee-eecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCCc
Confidence 4555 888999998854332233444565 369999999999964
No 288
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=97.44 E-value=0.00014 Score=60.11 Aligned_cols=34 Identities=26% Similarity=0.408 Sum_probs=31.7
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
..+|.|||+|..|..+|..|+++|++|+++|+++
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3579999999999999999999999999999985
No 289
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.43 E-value=0.00019 Score=53.22 Aligned_cols=36 Identities=31% Similarity=0.352 Sum_probs=32.8
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
....|+|+|+|..|..+|..|.+.|++|+++|+++.
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 346899999999999999999999999999999864
No 290
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.40 E-value=0.00061 Score=60.47 Aligned_cols=36 Identities=17% Similarity=0.226 Sum_probs=30.9
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhC--CCcEEEEeccCc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMS 53 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~--g~~V~viE~~~~ 53 (270)
..++|+|||+|-+|.=++..|+++ +.+|+++=|.+.
T Consensus 245 ~gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~~ 282 (501)
T 4b63_A 245 KPYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSA 282 (501)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSSS
T ss_pred CCcEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCCc
Confidence 346899999999999999999875 678999988753
No 291
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=97.36 E-value=0.00017 Score=60.53 Aligned_cols=33 Identities=18% Similarity=0.303 Sum_probs=30.3
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
..+|+|||+|.+|+-+|..|++.| +|+++.+..
T Consensus 163 ~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 163 GMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 468999999999999999999998 699999874
No 292
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=97.35 E-value=0.00024 Score=51.25 Aligned_cols=33 Identities=27% Similarity=0.502 Sum_probs=31.0
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
.+|+|||+|..|..+|..|++.|++|+++|+++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 489999999999999999999999999999874
No 293
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.34 E-value=0.0003 Score=51.92 Aligned_cols=34 Identities=24% Similarity=0.241 Sum_probs=31.6
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
+..|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 4579999999999999999999999999999974
No 294
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=97.30 E-value=0.0002 Score=59.74 Aligned_cols=36 Identities=22% Similarity=0.444 Sum_probs=32.0
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
...+|.|||+|..|..+|..|+++|++|+++|+++.
T Consensus 5 ~~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~ 40 (319)
T 2dpo_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 346899999999999999999999999999999853
No 295
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.27 E-value=0.0031 Score=55.27 Aligned_cols=35 Identities=14% Similarity=0.048 Sum_probs=31.1
Q ss_pred cceEEEEcCCHHHHHHHHHHH--------------------hCCC-cEEEEeccCc
Q 024233 19 KLRILVAGGGIGGLVFALAAK--------------------RKGF-EVLVFEKDMS 53 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La--------------------~~g~-~V~viE~~~~ 53 (270)
..+|+|||||.+|+-+|..|+ +.|. +|+|++|...
T Consensus 145 ~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~ 200 (460)
T 1cjc_A 145 CDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP 200 (460)
T ss_dssp SSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred CCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCCh
Confidence 468999999999999999999 5787 6999999854
No 296
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.26 E-value=0.00031 Score=48.97 Aligned_cols=33 Identities=30% Similarity=0.424 Sum_probs=31.0
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCC-CcEEEEeccC
Q 024233 20 LRILVAGGGIGGLVFALAAKRKG-FEVLVFEKDM 52 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g-~~V~viE~~~ 52 (270)
.+|+|+|+|..|..++..|.++| ++|+++++++
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 58999999999999999999999 8999999975
No 297
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.25 E-value=0.0019 Score=59.47 Aligned_cols=43 Identities=26% Similarity=0.252 Sum_probs=32.6
Q ss_pred hcCCccEEeCceEEEEEecCCeEEEEEcCC--cEEeccEEEecCCCCch
Q 024233 141 AVGDEIILNESNVIDFKDHGDKVSVVLENG--QCYAGDLLVGADGIWSK 187 (270)
Q Consensus 141 ~~~~~~i~~~~~v~~i~~~~~~~~v~~~~g--~~~~ad~vI~AdG~~S~ 187 (270)
..+.. ++.+++|+++. ++++.+. .+| +++.+|.||.|.|....
T Consensus 585 ~~GV~-v~~~~~v~~i~--~~~v~~~-~~G~~~~i~~D~Vi~a~G~~p~ 629 (671)
T 1ps9_A 585 SRGVK-MIPGVSYQKID--DDGLHVV-INGETQVLAVDNVVICAGQEPN 629 (671)
T ss_dssp HTTCE-EECSCEEEEEE--TTEEEEE-ETTEEEEECCSEEEECCCEEEC
T ss_pred hcCCE-EEeCcEEEEEe--CCeEEEe-cCCeEEEEeCCEEEECCCcccc
Confidence 34555 88899999986 3456554 567 57999999999998653
No 298
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=97.22 E-value=0.00035 Score=50.57 Aligned_cols=34 Identities=26% Similarity=0.243 Sum_probs=31.3
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
.+|+|+|+|..|..+|..|.+.|++|+++|+++.
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~ 40 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEE 40 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4799999999999999999999999999999753
No 299
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.15 E-value=0.0034 Score=54.99 Aligned_cols=36 Identities=25% Similarity=0.278 Sum_probs=30.8
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhC--------------------CC-cEEEEeccCc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRK--------------------GF-EVLVFEKDMS 53 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~--------------------g~-~V~viE~~~~ 53 (270)
...+|+|||+|.+|+-+|..|++. |. +|+|+++...
T Consensus 146 ~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~ 202 (456)
T 1lqt_A 146 SGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGP 202 (456)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCCh
Confidence 346899999999999999999974 64 8999999853
No 300
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.15 E-value=0.0017 Score=62.20 Aligned_cols=33 Identities=21% Similarity=0.103 Sum_probs=31.3
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
.+|+|||+|..|+-+|..|++.|.+|+|+|+.+
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~ 317 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARS 317 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCS
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCC
Confidence 589999999999999999999999999999985
No 301
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.13 E-value=0.00058 Score=63.48 Aligned_cols=34 Identities=15% Similarity=0.077 Sum_probs=31.6
Q ss_pred cceEEEEc--CCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 19 KLRILVAG--GGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 19 ~~dV~IIG--gG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
..+|+||| ||.+|+-+|..|++.|.+|+|+++.+
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 45899999 99999999999999999999999985
No 302
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.10 E-value=0.00049 Score=56.87 Aligned_cols=35 Identities=17% Similarity=0.206 Sum_probs=32.2
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.+.
T Consensus 145 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 179 (312)
T 4gcm_A 145 NKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDE 179 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEecccc
Confidence 35899999999999999999999999999999853
No 303
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=96.99 E-value=0.00058 Score=58.50 Aligned_cols=36 Identities=25% Similarity=0.200 Sum_probs=33.0
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCcc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSA 54 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~ 54 (270)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.+..
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~ 181 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYP 181 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCcc
Confidence 358999999999999999999999999999998653
No 304
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=96.96 E-value=0.00079 Score=55.52 Aligned_cols=34 Identities=24% Similarity=0.403 Sum_probs=31.8
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
..+|+|||||.+|+-+|..|++.|.+|+|+++..
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~ 185 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRD 185 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCeEEEECCChHHHHHHHHHHHhCCeeeeecccc
Confidence 4689999999999999999999999999999874
No 305
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.96 E-value=0.00072 Score=51.38 Aligned_cols=34 Identities=21% Similarity=0.103 Sum_probs=31.7
Q ss_pred cceEEEEcCCHHHHHHHHHHHhC-CCcEEEEeccC
Q 024233 19 KLRILVAGGGIGGLVFALAAKRK-GFEVLVFEKDM 52 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~-g~~V~viE~~~ 52 (270)
..+|+|||+|..|..+|..|.+. |++|+++|+++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 45899999999999999999999 99999999985
No 306
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=96.94 E-value=0.00098 Score=54.53 Aligned_cols=34 Identities=24% Similarity=0.425 Sum_probs=31.8
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
.+|.|||+|..|..+|..|+++|++|+++|+++.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~ 38 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTD 38 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence 5899999999999999999999999999999853
No 307
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=96.94 E-value=0.00087 Score=55.87 Aligned_cols=33 Identities=30% Similarity=0.399 Sum_probs=31.2
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
.+|+|||+|..|.++|..|++.|.+|++++|++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 589999999999999999999999999999974
No 308
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=96.87 E-value=0.001 Score=55.72 Aligned_cols=53 Identities=23% Similarity=0.195 Sum_probs=31.1
Q ss_pred CccccccCCCCCCCCCCCcceEEEEcC-CHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 1 MKAAVAESPTNNSDSENKKLRILVAGG-GIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~dV~IIGg-G~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
|-++++.+...+.+.......|+|.|| |..|..++..|.++|++|++++|.+.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 1 MGSSHHHHHHSSGLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp --------------------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCCcccCCCCCCcccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 344555555555555566778999999 99999999999999999999999853
No 309
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=96.84 E-value=0.0013 Score=54.54 Aligned_cols=36 Identities=25% Similarity=0.481 Sum_probs=33.0
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
...+|.|||.|..|..+|..|++.|++|+++|+++.
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred cCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 346899999999999999999999999999999864
No 310
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=96.83 E-value=0.002 Score=56.13 Aligned_cols=35 Identities=20% Similarity=0.356 Sum_probs=32.4
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
..+|.|||+|..|..+|..|+++|++|+++|+++.
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 35899999999999999999999999999999853
No 311
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=96.81 E-value=0.00097 Score=55.35 Aligned_cols=33 Identities=30% Similarity=0.472 Sum_probs=30.7
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
.+|+|||+|..|.++|..|++.|.+|++++|+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 479999999999999999999999999999974
No 312
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=96.80 E-value=0.00091 Score=52.40 Aligned_cols=33 Identities=18% Similarity=0.443 Sum_probs=31.1
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 21 RILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 21 dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
+|+|||+|..|..+|..|.++|++|+++|+++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 34 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDRE 34 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 699999999999999999999999999999864
No 313
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=96.76 E-value=0.0017 Score=53.87 Aligned_cols=35 Identities=23% Similarity=0.412 Sum_probs=32.2
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCC-cEEEEeccC
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 52 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~-~V~viE~~~ 52 (270)
...+|+|||+|..|.++|+.|+..|+ +|+++|+++
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~ 42 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQ 42 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccc
Confidence 45689999999999999999999999 999999983
No 314
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=96.76 E-value=0.0015 Score=54.80 Aligned_cols=32 Identities=22% Similarity=0.286 Sum_probs=30.5
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCCcEEEEecc
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 51 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~ 51 (270)
.+|+|||+|..|.++|..|++.|++|++++|.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 48999999999999999999999999999985
No 315
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.74 E-value=0.012 Score=56.85 Aligned_cols=33 Identities=24% Similarity=0.233 Sum_probs=30.9
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCC-cEEEEeccC
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 52 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~-~V~viE~~~ 52 (270)
.+|+|||||.+|+-+|..|++.|. +|+|+++.+
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 489999999999999999999997 899999985
No 316
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=96.71 E-value=0.0019 Score=50.28 Aligned_cols=35 Identities=20% Similarity=0.241 Sum_probs=31.8
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
..+|.|||+|-.|.++|..|++.|++|+++++++.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 45899999999999999999999999999999854
No 317
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=96.68 E-value=0.0015 Score=53.69 Aligned_cols=34 Identities=24% Similarity=0.416 Sum_probs=31.3
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
..+.|.|||+|..|..+|..|+ +|++|+++|+++
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 3579999999999999999999 999999999985
No 318
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=96.67 E-value=0.0019 Score=56.56 Aligned_cols=35 Identities=23% Similarity=0.153 Sum_probs=32.4
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
...+|.|||.|.+|+++|..|+++|++|++.|++.
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 45689999999999999999999999999999964
No 319
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=96.67 E-value=0.0014 Score=54.38 Aligned_cols=40 Identities=13% Similarity=0.215 Sum_probs=30.9
Q ss_pred CCCCCCCcceEEEEcCCHHHHHHHHHHHhCCC-cEEEEecc
Q 024233 12 NSDSENKKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKD 51 (270)
Q Consensus 12 ~~~~~~~~~dV~IIGgG~aGl~~A~~La~~g~-~V~viE~~ 51 (270)
+.|..+...+|.|||.|..|..+|..|++.|+ +|+++|++
T Consensus 17 ~~~~~~~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 17 NLYFQSNAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp --------CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred cccccCCCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 44444445689999999999999999999999 99999996
No 320
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=96.66 E-value=0.0014 Score=53.88 Aligned_cols=33 Identities=15% Similarity=0.218 Sum_probs=31.2
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
.+|+|||+|-.|.++|..|++.|.+|++++|++
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 479999999999999999999999999999984
No 321
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=96.66 E-value=0.0021 Score=53.82 Aligned_cols=34 Identities=12% Similarity=0.335 Sum_probs=31.6
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCC-cEEEEeccC
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 52 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~-~V~viE~~~ 52 (270)
+.+|+|||+|-.|.++|..|++.|+ +|+++|++.
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 3589999999999999999999998 999999985
No 322
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=96.64 E-value=0.0019 Score=53.38 Aligned_cols=33 Identities=21% Similarity=0.383 Sum_probs=30.9
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
.+|.|||+|..|.++|..|++.|++|+++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 479999999999999999999999999999874
No 323
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=96.62 E-value=0.0016 Score=53.55 Aligned_cols=35 Identities=20% Similarity=0.147 Sum_probs=32.5
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
..+|.|||.|..|..+|..|++.|++|+++|+++.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 46899999999999999999999999999999864
No 324
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=96.61 E-value=0.0021 Score=52.39 Aligned_cols=33 Identities=27% Similarity=0.316 Sum_probs=31.0
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 21 RILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 21 dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
+|.|||+|..|.++|..|++.|++|++++|++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 699999999999999999999999999999853
No 325
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=96.60 E-value=0.0024 Score=53.41 Aligned_cols=35 Identities=26% Similarity=0.381 Sum_probs=32.0
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCC-cEEEEeccCc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDMS 53 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~-~V~viE~~~~ 53 (270)
..+|+|||+|-.|..+|..|+..|+ +|+++|.+..
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~ 49 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEG 49 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHH
Confidence 3589999999999999999999999 9999999853
No 326
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.58 E-value=0.0026 Score=49.94 Aligned_cols=34 Identities=24% Similarity=0.236 Sum_probs=31.7
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEecc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 51 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~ 51 (270)
....|+|||||.+|...|..|.+.|.+|+|+++.
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 4578999999999999999999999999999876
No 327
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=96.57 E-value=0.0025 Score=53.86 Aligned_cols=34 Identities=32% Similarity=0.436 Sum_probs=31.8
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
..+|.|||+|..|.++|..|++.|++|+++++++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4689999999999999999999999999999974
No 328
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=96.55 E-value=0.0015 Score=54.08 Aligned_cols=38 Identities=24% Similarity=0.294 Sum_probs=30.2
Q ss_pred CCCCCCCcceEEEEcCCHHHHHHHHHHHhC-----C-CcEEEEec
Q 024233 12 NSDSENKKLRILVAGGGIGGLVFALAAKRK-----G-FEVLVFEK 50 (270)
Q Consensus 12 ~~~~~~~~~dV~IIGgG~aGl~~A~~La~~-----g-~~V~viE~ 50 (270)
|+|+.+ +.+|.|||+|..|.++|..|++. | ++|++++|
T Consensus 2 ~~m~~~-~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 2 NAMNQQ-PIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp -----C-CEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCCCCC-CCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 344432 35899999999999999999999 9 99999998
No 329
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=96.55 E-value=0.0023 Score=56.36 Aligned_cols=34 Identities=24% Similarity=0.436 Sum_probs=31.9
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
+.+|.|||.|..|+.+|..|++.|++|+++|+++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4689999999999999999999999999999975
No 330
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=96.54 E-value=0.0025 Score=52.95 Aligned_cols=33 Identities=27% Similarity=0.482 Sum_probs=31.0
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCC--cEEEEeccC
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 52 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~--~V~viE~~~ 52 (270)
.+|+|||+|-.|.++|..|++.|+ +|+++|++.
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 489999999999999999999998 999999974
No 331
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=96.53 E-value=0.0019 Score=54.83 Aligned_cols=32 Identities=28% Similarity=0.380 Sum_probs=30.6
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 21 RILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 21 dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
+|.|||+|..|.++|..|++.|++|+++++++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 89999999999999999999999999999874
No 332
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=96.53 E-value=0.0027 Score=55.35 Aligned_cols=35 Identities=34% Similarity=0.464 Sum_probs=32.9
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
+.+++|||.|..|+.+|..|++.|++|+++|+++.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 47999999999999999999999999999999864
No 333
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=96.52 E-value=0.0025 Score=55.71 Aligned_cols=34 Identities=35% Similarity=0.366 Sum_probs=31.7
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
.+|.|||.|..|+.+|..|+++|++|+++|+++.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~ 36 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRN 36 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHH
Confidence 4899999999999999999999999999999853
No 334
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=96.51 E-value=0.003 Score=50.48 Aligned_cols=37 Identities=30% Similarity=0.303 Sum_probs=32.6
Q ss_pred CCcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 17 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 17 ~~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
....+|.|||+|-.|.++|..|++.|++|++++|++.
T Consensus 17 ~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPK 53 (245)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 3457899999999999999999999999999999854
No 335
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=96.51 E-value=0.002 Score=52.30 Aligned_cols=35 Identities=31% Similarity=0.458 Sum_probs=32.1
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
....|+|||||-+|+..|..|.+.|.+|+|+++..
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 34689999999999999999999999999999864
No 336
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=96.48 E-value=0.0036 Score=51.88 Aligned_cols=35 Identities=20% Similarity=0.232 Sum_probs=32.1
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
..+|.|||+|..|..+|..|++.|++|+++++++.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 64 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAE 64 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 35899999999999999999999999999999754
No 337
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=96.48 E-value=0.0032 Score=55.23 Aligned_cols=34 Identities=29% Similarity=0.291 Sum_probs=31.7
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
..+|.|||+|..|..+|..|+++|++|+++|+++
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3579999999999999999999999999999985
No 338
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=96.45 E-value=0.0033 Score=53.77 Aligned_cols=35 Identities=29% Similarity=0.394 Sum_probs=32.6
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
..+|+|||+|.+|+.+|..|...|.+|+++|+++.
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 224 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPA 224 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 46899999999999999999999999999999864
No 339
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=96.44 E-value=0.0015 Score=57.30 Aligned_cols=34 Identities=21% Similarity=0.355 Sum_probs=31.8
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
.+|+|+|+|-.|..+|..|.+.|++|+|+|+++.
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~ 37 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGENNDITIVDKDGD 37 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 4799999999999999999999999999999853
No 340
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=96.44 E-value=0.0028 Score=56.71 Aligned_cols=35 Identities=20% Similarity=0.226 Sum_probs=32.0
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
.+.+++|||||++|+=+|..+++.|.+|+|+++..
T Consensus 222 lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~ 256 (542)
T 4b1b_A 222 DPGKTLVVGASYVALECSGFLNSLGYDVTVAVRSI 256 (542)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSC
T ss_pred CCceEEEECCCHHHHHHHHHHHhcCCeEEEecccc
Confidence 35689999999999999999999999999999864
No 341
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=96.44 E-value=0.003 Score=53.22 Aligned_cols=33 Identities=36% Similarity=0.412 Sum_probs=31.1
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
.+|+|||+|..|..+|..|++.|++|+++++++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 589999999999999999999999999999974
No 342
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=96.41 E-value=0.0032 Score=52.06 Aligned_cols=32 Identities=31% Similarity=0.391 Sum_probs=30.1
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
.+|+|||+|..|.++|..|+ .|.+|++++|++
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 58999999999999999999 999999999874
No 343
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=96.41 E-value=0.0037 Score=49.32 Aligned_cols=37 Identities=24% Similarity=0.345 Sum_probs=32.3
Q ss_pred CCcceEEEEcC-CHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 17 NKKLRILVAGG-GIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 17 ~~~~dV~IIGg-G~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
.....|+|.|| |..|..++..|+++|++|+++.|++.
T Consensus 19 l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~ 56 (236)
T 3e8x_A 19 FQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEE 56 (236)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred cCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChH
Confidence 44578999998 99999999999999999999999853
No 344
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=96.39 E-value=0.0026 Score=55.48 Aligned_cols=35 Identities=20% Similarity=0.297 Sum_probs=32.0
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
..+|.|||.|.+|+++|..|+++|++|+++|.+..
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~ 39 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMT 39 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSS
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCC
Confidence 35799999999999999999999999999998754
No 345
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=96.39 E-value=0.0033 Score=52.27 Aligned_cols=33 Identities=24% Similarity=0.358 Sum_probs=31.1
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCC-cEEEEeccC
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 52 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~-~V~viE~~~ 52 (270)
.+|+|||+|-.|.++|..|++.|+ +|+++|+++
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 589999999999999999999998 999999975
No 346
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=96.38 E-value=0.0045 Score=51.41 Aligned_cols=35 Identities=26% Similarity=0.487 Sum_probs=32.1
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCC--cEEEEeccC
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 52 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~--~V~viE~~~ 52 (270)
...+|.|||.|..|.++|..|++.|+ +|+++|+++
T Consensus 32 ~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp SCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 34689999999999999999999999 999999985
No 347
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=96.36 E-value=0.0037 Score=52.33 Aligned_cols=35 Identities=31% Similarity=0.531 Sum_probs=31.8
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
++.+|.|||+|..|.++|..|++.|++|++++|++
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 45689999999999999999999999999999874
No 348
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=96.36 E-value=0.0038 Score=51.49 Aligned_cols=34 Identities=18% Similarity=0.190 Sum_probs=31.8
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
..+|.|||.|..|..+|..|++.|++|+++|+++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3589999999999999999999999999999985
No 349
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=96.34 E-value=0.0036 Score=54.96 Aligned_cols=34 Identities=29% Similarity=0.350 Sum_probs=32.2
Q ss_pred ceEEEEcCCHHHHHHHHHHHhC-CC-cEEEEeccCc
Q 024233 20 LRILVAGGGIGGLVFALAAKRK-GF-EVLVFEKDMS 53 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~-g~-~V~viE~~~~ 53 (270)
.+|.|||+|..|+.+|..|++. |+ +|+++|+++.
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 5899999999999999999999 99 9999999865
No 350
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=96.34 E-value=0.0039 Score=50.98 Aligned_cols=34 Identities=21% Similarity=0.282 Sum_probs=31.7
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
.+|.|||.|..|..+|..|++.|++|+++|+++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 4799999999999999999999999999999864
No 351
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=96.34 E-value=0.0032 Score=53.40 Aligned_cols=36 Identities=31% Similarity=0.351 Sum_probs=32.9
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
...+|+|||+|.+|+.+|..|...|.+|+++|+++.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 218 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPE 218 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGG
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 356899999999999999999999999999999864
No 352
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=96.33 E-value=0.0036 Score=52.09 Aligned_cols=35 Identities=23% Similarity=0.341 Sum_probs=32.4
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
..+|.|||.|..|..+|..|++.|++|+++|+++.
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 65 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPA 65 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHH
Confidence 45899999999999999999999999999999853
No 353
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=96.33 E-value=0.0046 Score=53.60 Aligned_cols=36 Identities=25% Similarity=0.296 Sum_probs=32.7
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
....|.|||.|-+||.+|..|+++|++|+.+|.++.
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~ 55 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPS 55 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHH
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHH
Confidence 346899999999999999999999999999998853
No 354
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=96.31 E-value=0.0021 Score=46.73 Aligned_cols=35 Identities=20% Similarity=0.255 Sum_probs=31.8
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
..+|+|||+|..|.++|..|++.|.+|+++++++.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~ 55 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNID 55 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHH
Confidence 46899999999999999999999999999999853
No 355
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=96.31 E-value=0.004 Score=51.81 Aligned_cols=34 Identities=21% Similarity=0.423 Sum_probs=29.8
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
...+|+|||+|..|.++|..|++.|++|+++ +++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 3468999999999999999999999999999 653
No 356
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=96.29 E-value=0.013 Score=50.19 Aligned_cols=39 Identities=15% Similarity=0.321 Sum_probs=30.8
Q ss_pred CCccEEeCceEEEEEecCCeEEEEEcCCcEEeccEEEecCCCCc
Q 024233 143 GDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLVGADGIWS 186 (270)
Q Consensus 143 ~~~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~ad~vI~AdG~~S 186 (270)
+.. ++.+++|+++..+ + +.+++|+++.+|.||.|.|...
T Consensus 232 gV~-~~~~~~v~~i~~~--~--v~~~~g~~~~~D~vi~a~G~~~ 270 (409)
T 3h8l_A 232 GIK-LVHNFKIKEIREH--E--IVDEKGNTIPADITILLPPYTG 270 (409)
T ss_dssp TCE-EECSCCEEEECSS--E--EEETTSCEEECSEEEEECCEEC
T ss_pred CCE-EEcCCceEEECCC--e--EEECCCCEEeeeEEEECCCCCc
Confidence 444 7778889888643 3 6778899999999999999754
No 357
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=96.26 E-value=0.0045 Score=54.53 Aligned_cols=34 Identities=26% Similarity=0.398 Sum_probs=31.8
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
.+|.|||+|..|..+|..|+++|++|+++|+++.
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 39 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAE 39 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 4799999999999999999999999999999853
No 358
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=96.24 E-value=0.0053 Score=47.93 Aligned_cols=35 Identities=20% Similarity=0.213 Sum_probs=31.5
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
..+|.|||+|-.|.++|..|++.|++|++++|++.
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~ 62 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRNPK 62 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHH
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 35899999999999999999999999999999753
No 359
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=96.21 E-value=0.005 Score=50.88 Aligned_cols=32 Identities=28% Similarity=0.442 Sum_probs=30.2
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCC--cEEEEeccC
Q 024233 21 RILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 52 (270)
Q Consensus 21 dV~IIGgG~aGl~~A~~La~~g~--~V~viE~~~ 52 (270)
+|+|||+|-.|.++|..|+..|+ +|+++|++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 79999999999999999999999 899999874
No 360
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=96.19 E-value=0.0038 Score=49.99 Aligned_cols=36 Identities=19% Similarity=0.250 Sum_probs=32.6
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCC-cEEEEeccCcc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDMSA 54 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~-~V~viE~~~~~ 54 (270)
..+|+|||+|-.|..+|..|++.|. +++|+|++...
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~ 67 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVS 67 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcc
Confidence 4689999999999999999999998 89999998643
No 361
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=96.17 E-value=0.0055 Score=50.91 Aligned_cols=35 Identities=23% Similarity=0.523 Sum_probs=31.0
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCC--cEEEEeccC
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 52 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~--~V~viE~~~ 52 (270)
...+|+|||+|.+|.++|+.|+..|. +|+++|.+.
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 34689999999999999999998886 799999874
No 362
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=96.17 E-value=0.0062 Score=50.72 Aligned_cols=36 Identities=25% Similarity=0.370 Sum_probs=32.4
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCC-cEEEEeccCc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDMS 53 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~-~V~viE~~~~ 53 (270)
...+|+|||+|-.|.++|..|+..|+ +|+++|.++.
T Consensus 6 ~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~ 42 (324)
T 3gvi_A 6 ARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEG 42 (324)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCch
Confidence 34689999999999999999999999 9999999753
No 363
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=96.14 E-value=0.0058 Score=50.77 Aligned_cols=34 Identities=12% Similarity=0.081 Sum_probs=31.8
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCC-CcEEEEeccC
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKG-FEVLVFEKDM 52 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g-~~V~viE~~~ 52 (270)
..+|.|||.|..|..+|..|++.| ++|+++|+++
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 358999999999999999999999 9999999985
No 364
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=96.13 E-value=0.0069 Score=50.45 Aligned_cols=33 Identities=27% Similarity=0.461 Sum_probs=30.9
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCC-cEEEEeccC
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 52 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~-~V~viE~~~ 52 (270)
.+|+|||+|-+|..+|..|+..|+ +|+++|.+.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 489999999999999999999998 999999875
No 365
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=96.12 E-value=0.0058 Score=49.59 Aligned_cols=34 Identities=18% Similarity=0.267 Sum_probs=31.7
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
.+|+|.|+|..|..++..|.++|++|+++.|++.
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPD 39 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChh
Confidence 5899999999999999999999999999999753
No 366
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=96.11 E-value=0.005 Score=53.13 Aligned_cols=34 Identities=24% Similarity=0.410 Sum_probs=31.8
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
..|+|||.|-.|..+|..|.+.|++|+++|+++.
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 4799999999999999999999999999999864
No 367
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=96.11 E-value=0.0032 Score=49.38 Aligned_cols=35 Identities=11% Similarity=0.120 Sum_probs=31.6
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEE-EeccCc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLV-FEKDMS 53 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~v-iE~~~~ 53 (270)
..+|.|||+|-.|.++|..|++.|++|++ ++|++.
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~ 58 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPA 58 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHH
Confidence 35899999999999999999999999999 888753
No 368
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=96.08 E-value=0.0058 Score=53.84 Aligned_cols=37 Identities=27% Similarity=0.416 Sum_probs=32.5
Q ss_pred CCcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 17 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 17 ~~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
+.+.+|.|||.|..|.++|..|+++|++|++++|++.
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~ 49 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSRE 49 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHH
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence 3456899999999999999999999999999999853
No 369
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=96.06 E-value=0.0049 Score=53.64 Aligned_cols=33 Identities=30% Similarity=0.349 Sum_probs=30.8
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 21 RILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 21 dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
+|.|||+|..|+.+|..|++.|++|+++|+++.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~ 34 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSST 34 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 699999999999999999999999999999753
No 370
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=96.06 E-value=0.0067 Score=50.62 Aligned_cols=33 Identities=33% Similarity=0.303 Sum_probs=30.6
Q ss_pred ceEEEEcCCHHHHH-HHHHHHhCCCcEEEEeccC
Q 024233 20 LRILVAGGGIGGLV-FALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 20 ~dV~IIGgG~aGl~-~A~~La~~g~~V~viE~~~ 52 (270)
.+|.|||.|.+|++ +|..|+++|++|++.|++.
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 58999999999996 8999999999999999975
No 371
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=96.06 E-value=0.0093 Score=49.03 Aligned_cols=33 Identities=21% Similarity=0.454 Sum_probs=31.1
Q ss_pred ceEEEEc-CCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 20 LRILVAG-GGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 20 ~dV~IIG-gG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
.+|.||| .|..|.++|..|++.|++|+++++++
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 4799999 99999999999999999999999875
No 372
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=96.05 E-value=0.008 Score=49.99 Aligned_cols=34 Identities=26% Similarity=0.353 Sum_probs=31.3
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCC-cEEEEeccC
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 52 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~-~V~viE~~~ 52 (270)
..+|+|||+|.+|.++|..|+..|+ +++++|.++
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 3589999999999999999999988 999999875
No 373
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=96.03 E-value=0.0065 Score=52.58 Aligned_cols=33 Identities=21% Similarity=0.379 Sum_probs=30.7
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
.+|.|||.|..|+.+|..|++ |++|+++|+++.
T Consensus 37 mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~ 69 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQA 69 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHH
Confidence 489999999999999999998 999999999854
No 374
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=96.03 E-value=0.0045 Score=50.62 Aligned_cols=33 Identities=30% Similarity=0.376 Sum_probs=31.2
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 21 RILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 21 dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
+|.|||.|..|..+|..|++.|++|+++|+++.
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 799999999999999999999999999999864
No 375
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=96.02 E-value=0.0054 Score=51.16 Aligned_cols=30 Identities=20% Similarity=0.352 Sum_probs=29.1
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEec
Q 024233 21 RILVAGGGIGGLVFALAAKRKGFEVLVFEK 50 (270)
Q Consensus 21 dV~IIGgG~aGl~~A~~La~~g~~V~viE~ 50 (270)
+|.|||+|..|.++|..|++.|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 699999999999999999999999999999
No 376
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=96.02 E-value=0.0087 Score=49.42 Aligned_cols=35 Identities=20% Similarity=0.358 Sum_probs=32.3
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
..+|.|||.|..|..+|..|++.|++|+++|+++.
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 43 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPG 43 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 35899999999999999999999999999999853
No 377
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=95.99 E-value=0.0066 Score=50.45 Aligned_cols=35 Identities=20% Similarity=0.454 Sum_probs=30.9
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCC--cEEEEeccC
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 52 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~--~V~viE~~~ 52 (270)
.+.+|+|||+|-+|.++|+.|+.+|. ++.++|.+.
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~ 41 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDT 41 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 44699999999999999999999885 799999763
No 378
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=95.99 E-value=0.0074 Score=51.04 Aligned_cols=35 Identities=20% Similarity=0.362 Sum_probs=32.3
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
..+|.|||.|..|..+|..|++.|++|+++|+++.
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~ 56 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVN 56 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 36899999999999999999999999999999853
No 379
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=95.99 E-value=0.0076 Score=53.29 Aligned_cols=36 Identities=22% Similarity=0.302 Sum_probs=32.9
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
+..+|.|||.|..|..+|..|+++|++|++++|++.
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~ 44 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQS 44 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSH
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 346899999999999999999999999999999864
No 380
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=95.99 E-value=0.0048 Score=50.76 Aligned_cols=34 Identities=26% Similarity=0.337 Sum_probs=28.2
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
.+|.+||-|..|..+|..|.++|++|+++||++.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~ 39 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTAS 39 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-----
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 4799999999999999999999999999999864
No 381
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=95.98 E-value=0.0074 Score=51.86 Aligned_cols=35 Identities=29% Similarity=0.414 Sum_probs=32.3
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
...|+|||+|.+|+.+|..|...|.+|+++|+++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~ 206 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPE 206 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 46899999999999999999999999999999864
No 382
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=95.98 E-value=0.0092 Score=48.44 Aligned_cols=34 Identities=32% Similarity=0.405 Sum_probs=31.5
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
..|+|.|+|..|..++..|.++|++|+++.|+..
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 4799999999999999999999999999999753
No 383
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=95.94 E-value=0.0064 Score=49.88 Aligned_cols=34 Identities=18% Similarity=0.357 Sum_probs=31.4
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
.+|.|||+|..|..+|..|++.|++|+++|+++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~ 39 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPE 39 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 4899999999999999999999999999999753
No 384
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=95.94 E-value=0.0094 Score=48.56 Aligned_cols=35 Identities=17% Similarity=0.311 Sum_probs=31.9
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCC---cEEEEeccCc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGF---EVLVFEKDMS 53 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~---~V~viE~~~~ 53 (270)
..+|.|||+|-.|.++|..|++.|+ +|+++|+++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~ 40 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLD 40 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHH
Confidence 3579999999999999999999999 8999999863
No 385
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=95.93 E-value=0.011 Score=54.70 Aligned_cols=34 Identities=24% Similarity=0.355 Sum_probs=31.7
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
.+|.|||+|..|..+|..|+++|++|+++|+++.
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~ 346 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNEK 346 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHH
Confidence 4799999999999999999999999999999853
No 386
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=95.93 E-value=0.0089 Score=49.48 Aligned_cols=33 Identities=18% Similarity=0.251 Sum_probs=30.6
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCC-cEEEEeccC
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 52 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~-~V~viE~~~ 52 (270)
.+|+|||+|-+|..+|+.|+..|+ +|+++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 489999999999999999999997 999999875
No 387
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=95.93 E-value=0.01 Score=48.34 Aligned_cols=33 Identities=12% Similarity=0.132 Sum_probs=31.0
Q ss_pred ceEEEEcC-CHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 20 LRILVAGG-GIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 20 ~dV~IIGg-G~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
.+|.|||+ |-.|.++|..|++.|++|+++++++
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 48999999 9999999999999999999999874
No 388
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=95.92 E-value=0.0076 Score=48.40 Aligned_cols=34 Identities=12% Similarity=0.159 Sum_probs=31.2
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCC----CcEEEEeccCc
Q 024233 20 LRILVAGGGIGGLVFALAAKRKG----FEVLVFEKDMS 53 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g----~~V~viE~~~~ 53 (270)
.+|.|||+|..|.++|..|++.| ++|+++++++.
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 47999999999999999999999 69999999854
No 389
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=95.92 E-value=0.0085 Score=49.62 Aligned_cols=33 Identities=24% Similarity=0.299 Sum_probs=30.0
Q ss_pred eEEEEcCCHHHHHHHHHHHhC--CCcEEEEeccCc
Q 024233 21 RILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMS 53 (270)
Q Consensus 21 dV~IIGgG~aGl~~A~~La~~--g~~V~viE~~~~ 53 (270)
+|+|||+|-.|.++|..|++. |.+|+++|+++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~ 36 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEG 36 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChh
Confidence 699999999999999999985 789999999853
No 390
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=95.92 E-value=0.0069 Score=49.84 Aligned_cols=34 Identities=26% Similarity=0.262 Sum_probs=31.6
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
.+|.|||.|..|..+|..|++.|++|+++|+++.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~ 37 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQS 37 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHH
Confidence 4899999999999999999999999999999853
No 391
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=95.92 E-value=0.0085 Score=52.68 Aligned_cols=34 Identities=26% Similarity=0.401 Sum_probs=32.0
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
.+|.|||.|..|..+|..|+++|++|+++|+++.
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~ 38 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVS 38 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTH
T ss_pred CEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 5899999999999999999999999999999864
No 392
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=95.91 E-value=0.0068 Score=53.41 Aligned_cols=34 Identities=18% Similarity=0.235 Sum_probs=31.0
Q ss_pred ceEEEEcCCHHHHHHHHHHHhC--CCcEEEEeccCc
Q 024233 20 LRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMS 53 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~--g~~V~viE~~~~ 53 (270)
.+|.|||.|..|+.+|..|+++ |++|+++|+++.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~ 45 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTA 45 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHH
Confidence 4899999999999999999998 789999998753
No 393
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=95.91 E-value=0.0095 Score=49.96 Aligned_cols=35 Identities=14% Similarity=0.171 Sum_probs=32.1
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
..+|.|||.|..|.++|..|++.|++|+++|+++.
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~ 42 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRS 42 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 35799999999999999999999999999999853
No 394
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=95.86 E-value=0.0097 Score=50.82 Aligned_cols=36 Identities=33% Similarity=0.420 Sum_probs=32.7
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
...+|+|+|+|.+|+.+|..|...|.+|+++|+++.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~ 206 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAA 206 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 356899999999999999999999999999999853
No 395
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=95.85 E-value=0.0088 Score=49.84 Aligned_cols=34 Identities=24% Similarity=0.464 Sum_probs=30.8
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCC--cEEEEeccC
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 52 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~--~V~viE~~~ 52 (270)
..+|+|||+|.+|.++|+.|+..|+ +++++|.+.
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVNK 40 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecch
Confidence 4589999999999999999999997 899999864
No 396
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=95.85 E-value=0.0075 Score=49.37 Aligned_cols=37 Identities=27% Similarity=0.390 Sum_probs=32.9
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCC-cEEEEeccCcc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDMSA 54 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~-~V~viE~~~~~ 54 (270)
...+|+|||+|-.|+.+|..|++.|. +++|+|.+...
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~Ve 72 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVE 72 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC-
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCccC
Confidence 35689999999999999999999998 89999998654
No 397
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=95.85 E-value=0.013 Score=48.92 Aligned_cols=38 Identities=18% Similarity=0.283 Sum_probs=33.6
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCC-cEEEEeccCccc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDMSAI 55 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~-~V~viE~~~~~~ 55 (270)
...+|+|||+|-.|+.+|..|++.|. +++|+|.+....
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~Ve~ 71 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSY 71 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCT
T ss_pred hCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEecc
Confidence 35789999999999999999999998 799999986543
No 398
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=95.85 E-value=0.01 Score=45.99 Aligned_cols=32 Identities=28% Similarity=0.324 Sum_probs=30.1
Q ss_pred eEEEEc-CCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 21 RILVAG-GGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 21 dV~IIG-gG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
+|+||| +|-.|..+|..|+++|++|++++|++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 689999 99999999999999999999999874
No 399
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=95.85 E-value=0.0088 Score=49.79 Aligned_cols=33 Identities=18% Similarity=0.301 Sum_probs=30.8
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCC----CcEEEEeccC
Q 024233 20 LRILVAGGGIGGLVFALAAKRKG----FEVLVFEKDM 52 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g----~~V~viE~~~ 52 (270)
.+|.|||+|..|.++|..|++.| ++|++++|++
T Consensus 23 mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 47999999999999999999999 7999999975
No 400
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=95.84 E-value=0.01 Score=50.29 Aligned_cols=34 Identities=26% Similarity=0.439 Sum_probs=31.7
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
...|+|+|+|.+|++++..|+..|.+|+++|+++
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3689999999999999999999999999999985
No 401
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=95.81 E-value=0.0027 Score=50.10 Aligned_cols=32 Identities=22% Similarity=0.220 Sum_probs=30.4
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCCcEEEEecc
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 51 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~ 51 (270)
.+|.|||.|..|.++|..|+++|++|+.+++.
T Consensus 7 mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 7 LRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CEEEEECCSCCCSCHHHHHHHTTCEEEECSSG
T ss_pred cEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH
Confidence 58999999999999999999999999999985
No 402
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=95.81 E-value=0.0078 Score=51.76 Aligned_cols=31 Identities=29% Similarity=0.317 Sum_probs=29.4
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 21 RILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 21 dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
+|.|||.|..|+.+|..|++ |++|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 69999999999999999999 99999999975
No 403
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=95.76 E-value=0.014 Score=46.84 Aligned_cols=37 Identities=24% Similarity=0.169 Sum_probs=32.2
Q ss_pred CCCcceEEEEcC-CH-HHHHHHHHHHhCCCcEEEEeccC
Q 024233 16 ENKKLRILVAGG-GI-GGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 16 ~~~~~dV~IIGg-G~-aGl~~A~~La~~g~~V~viE~~~ 52 (270)
....+.|+|.|| |- .|..+|..|+++|++|++++|+.
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~ 57 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHE 57 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCH
Confidence 345568999999 74 99999999999999999999875
No 404
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=95.76 E-value=0.0083 Score=49.88 Aligned_cols=32 Identities=34% Similarity=0.445 Sum_probs=30.1
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCC--cEEEEeccC
Q 024233 21 RILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 52 (270)
Q Consensus 21 dV~IIGgG~aGl~~A~~La~~g~--~V~viE~~~ 52 (270)
+|+|||+|-.|.++|..|++.|+ +|+++|+++
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 69999999999999999999999 999999874
No 405
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=95.75 E-value=0.0092 Score=48.06 Aligned_cols=33 Identities=33% Similarity=0.431 Sum_probs=30.6
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCCc-EEEEeccC
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGFE-VLVFEKDM 52 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~~-V~viE~~~ 52 (270)
.+|.|||+|-.|..+|..|++.|++ |.++++++
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 5899999999999999999999998 89999874
No 406
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=95.75 E-value=0.0054 Score=51.65 Aligned_cols=34 Identities=15% Similarity=0.164 Sum_probs=31.4
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCC-------CcEEEEeccCc
Q 024233 20 LRILVAGGGIGGLVFALAAKRKG-------FEVLVFEKDMS 53 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g-------~~V~viE~~~~ 53 (270)
.+|.|||+|..|.++|..|++.| ++|+++++++.
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 48999999999999999999999 89999999853
No 407
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=95.74 E-value=0.0058 Score=48.29 Aligned_cols=34 Identities=9% Similarity=0.094 Sum_probs=30.8
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
...|+|+|+|..|..+|..|.+.|+ |+++|+++.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~ 42 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENV 42 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGG
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHH
Confidence 4589999999999999999999999 999999864
No 408
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=95.72 E-value=0.012 Score=49.99 Aligned_cols=35 Identities=23% Similarity=0.321 Sum_probs=32.2
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
....|+|+|+|.+|+.+|..|+..|.+|+++|+++
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 34689999999999999999999999999999975
No 409
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=95.71 E-value=0.011 Score=49.06 Aligned_cols=34 Identities=15% Similarity=0.269 Sum_probs=30.8
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCC--cEEEEeccC
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 52 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~--~V~viE~~~ 52 (270)
+.+|+|||+|-+|.++|+.|+..|. +|+++|.+.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999999998 899999874
No 410
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=95.71 E-value=0.01 Score=50.35 Aligned_cols=35 Identities=31% Similarity=0.420 Sum_probs=32.3
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCC-cEEEEeccC
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 52 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~-~V~viE~~~ 52 (270)
.+.+|+|+|||.+|..+|..|...|. +|+++|++-
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 45799999999999999999999999 899999983
No 411
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=95.70 E-value=0.011 Score=47.85 Aligned_cols=32 Identities=25% Similarity=0.354 Sum_probs=30.1
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 21 RILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 21 dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
+|.|||+|..|.++|..|++.|++|+++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 68999999999999999999999999999874
No 412
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=95.69 E-value=0.013 Score=47.49 Aligned_cols=34 Identities=24% Similarity=0.260 Sum_probs=31.4
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
...|+|+|+|-+|.++|..|++.|.+|+|++|+.
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 4689999999999999999999999999999874
No 413
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=95.66 E-value=0.016 Score=53.71 Aligned_cols=36 Identities=28% Similarity=0.270 Sum_probs=32.9
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
.-.+|.|||+|..|..+|+.++..|++|+++|.++.
T Consensus 315 ~i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~ 350 (742)
T 3zwc_A 315 PVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPK 350 (742)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred cccEEEEEcccHHHHHHHHHHHhCCCchhcccchHh
Confidence 346899999999999999999999999999999853
No 414
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=95.66 E-value=0.014 Score=46.57 Aligned_cols=34 Identities=15% Similarity=0.196 Sum_probs=31.3
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCC----cEEEEeccCc
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGF----EVLVFEKDMS 53 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~----~V~viE~~~~ 53 (270)
.+|.|||+|-.|.++|..|++.|+ +|+++||++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~ 40 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTA 40 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHH
Confidence 479999999999999999999998 9999999853
No 415
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=95.66 E-value=0.011 Score=49.17 Aligned_cols=35 Identities=20% Similarity=0.357 Sum_probs=31.2
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCC--cEEEEeccC
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 52 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~--~V~viE~~~ 52 (270)
...+|+|||+|.+|.++|+.|+..|+ +++++|.+.
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 44 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFK 44 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 44689999999999999999999988 899999863
No 416
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=95.63 E-value=0.015 Score=46.99 Aligned_cols=34 Identities=24% Similarity=0.380 Sum_probs=31.8
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
..+|+|+|+|-+|.++|..|++.|.+|+|+.|..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 5689999999999999999999999999999985
No 417
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=95.62 E-value=0.012 Score=51.78 Aligned_cols=34 Identities=26% Similarity=0.401 Sum_probs=31.5
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
.+|.|||.|..|..+|..|+++|++|++++|++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~ 36 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVS 36 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 4799999999999999999999999999999753
No 418
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=95.61 E-value=0.0086 Score=50.93 Aligned_cols=34 Identities=21% Similarity=0.225 Sum_probs=31.2
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCC-------CcEEEEeccCc
Q 024233 20 LRILVAGGGIGGLVFALAAKRKG-------FEVLVFEKDMS 53 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g-------~~V~viE~~~~ 53 (270)
.+|.|||+|..|.++|..|++.| ++|+++++++.
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 47999999999999999999999 99999999753
No 419
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=95.60 E-value=0.018 Score=47.89 Aligned_cols=34 Identities=24% Similarity=0.208 Sum_probs=31.0
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCC--cEEEEeccC
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 52 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~--~V~viE~~~ 52 (270)
..+|+|||+|.+|.++|+.|+..|+ +++++|.+.
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 4689999999999999999999998 899999864
No 420
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=95.60 E-value=0.017 Score=44.14 Aligned_cols=34 Identities=35% Similarity=0.507 Sum_probs=31.5
Q ss_pred ceEEEEcC-CHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 20 LRILVAGG-GIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 20 ~dV~IIGg-G~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
..|+|.|| |..|..++..|.++|++|+++.|++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~ 38 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSS 38 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChh
Confidence 47999999 99999999999999999999999854
No 421
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=95.59 E-value=0.011 Score=47.48 Aligned_cols=32 Identities=16% Similarity=0.357 Sum_probs=30.0
Q ss_pred eEEEEcCCHHHHHHHHHHHhCC-CcEEEEeccC
Q 024233 21 RILVAGGGIGGLVFALAAKRKG-FEVLVFEKDM 52 (270)
Q Consensus 21 dV~IIGgG~aGl~~A~~La~~g-~~V~viE~~~ 52 (270)
+|.|||+|-.|.++|..|++.| ++|+++++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 6999999999999999999999 9999999874
No 422
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=95.59 E-value=0.012 Score=49.86 Aligned_cols=34 Identities=18% Similarity=0.370 Sum_probs=31.8
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCC-cEEEEecc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKD 51 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~-~V~viE~~ 51 (270)
.+.+|+|+|||.+|..+|..|...|. +|+++|++
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 45799999999999999999999998 79999998
No 423
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=95.59 E-value=0.015 Score=46.50 Aligned_cols=36 Identities=22% Similarity=0.228 Sum_probs=32.6
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCC-cEEEEeccCcc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDMSA 54 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~-~V~viE~~~~~ 54 (270)
..+|+|||+|-.|..+|..|++.|. +++|+|.+...
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v~ 64 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVH 64 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBCC
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCcc
Confidence 4689999999999999999999998 79999998654
No 424
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=95.58 E-value=0.012 Score=48.24 Aligned_cols=33 Identities=15% Similarity=0.227 Sum_probs=30.9
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 21 RILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 21 dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
+|.|||.|..|..+|..|++.|++|+++++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 34 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPD 34 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSSTH
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 699999999999999999999999999999854
No 425
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=95.58 E-value=0.0079 Score=51.70 Aligned_cols=30 Identities=33% Similarity=0.543 Sum_probs=28.2
Q ss_pred ceEEEEcCCHHHHHHHHHHHh-CCCcEEEEe
Q 024233 20 LRILVAGGGIGGLVFALAAKR-KGFEVLVFE 49 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~-~g~~V~viE 49 (270)
.+|+|||+|..|.++|..|++ .|++|++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 479999999999999999998 599999999
No 426
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=95.58 E-value=0.014 Score=47.46 Aligned_cols=32 Identities=28% Similarity=0.563 Sum_probs=30.0
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCC--cEEEEeccC
Q 024233 21 RILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 52 (270)
Q Consensus 21 dV~IIGgG~aGl~~A~~La~~g~--~V~viE~~~ 52 (270)
+|.|||+|..|.++|..|++.|+ +|+++|+++
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 69999999999999999999998 899999874
No 427
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=95.55 E-value=0.011 Score=48.92 Aligned_cols=33 Identities=18% Similarity=0.188 Sum_probs=30.3
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCC--CcEEEEeccC
Q 024233 20 LRILVAGGGIGGLVFALAAKRKG--FEVLVFEKDM 52 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g--~~V~viE~~~ 52 (270)
.+|+|||+|-.|.++|..|+++| .+|+++|+++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 37999999999999999999999 6899999974
No 428
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=95.54 E-value=0.015 Score=51.20 Aligned_cols=33 Identities=21% Similarity=0.421 Sum_probs=31.3
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
.+|.|||.|..|..+|..|++.|++|++++|++
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 589999999999999999999999999999975
No 429
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=95.53 E-value=0.015 Score=49.47 Aligned_cols=36 Identities=25% Similarity=0.372 Sum_probs=32.7
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
....|+|||+|.+|+.+|..|+..|.+|+++|+++.
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~ 202 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINID 202 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 456899999999999999999999999999999753
No 430
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=94.52 E-value=0.0022 Score=49.59 Aligned_cols=36 Identities=19% Similarity=0.226 Sum_probs=32.2
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
...+|.|||+|-.|.++|..|++.|++|++++|++.
T Consensus 18 ~~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~ 53 (201)
T 2yjz_A 18 KQGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQ 53 (201)
Confidence 445799999999999999999999999999998753
No 431
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=95.52 E-value=0.012 Score=54.41 Aligned_cols=34 Identities=26% Similarity=0.291 Sum_probs=31.7
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
.+|.|||+|..|..+|..|+++|++|+++|+++.
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~ 348 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINEH 348 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred CEEEEECCChhhHHHHHHHHhCCCEEEEEECCHH
Confidence 4799999999999999999999999999999853
No 432
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=95.52 E-value=0.013 Score=48.15 Aligned_cols=34 Identities=24% Similarity=0.320 Sum_probs=31.4
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
.+|.|||+|..|..+|..|++.|++|+++++++.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~ 38 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEA 38 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 5899999999999999999999999999999753
No 433
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=95.48 E-value=0.016 Score=48.88 Aligned_cols=34 Identities=26% Similarity=0.497 Sum_probs=31.5
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
++|+|+|||..|..+|+.+.+.|++|+++|.++.
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 5799999999999999999999999999998764
No 434
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=95.48 E-value=0.016 Score=50.62 Aligned_cols=36 Identities=22% Similarity=0.260 Sum_probs=32.1
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCC-cEEEEeccCc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDMS 53 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~-~V~viE~~~~ 53 (270)
...+|+|||||.+|+-+|..+.+.|. +|+++++.+.
T Consensus 263 ~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~ 299 (456)
T 2vdc_G 263 AGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDR 299 (456)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCS
T ss_pred CCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCc
Confidence 45689999999999999999999998 5999999853
No 435
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=95.47 E-value=0.017 Score=47.51 Aligned_cols=34 Identities=21% Similarity=0.233 Sum_probs=31.4
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCC-cEEEEeccC
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 52 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~-~V~viE~~~ 52 (270)
...|+|+|+|-+|.++|..|++.|. +|+|++|..
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 4689999999999999999999998 899999974
No 436
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=95.45 E-value=0.013 Score=48.11 Aligned_cols=32 Identities=16% Similarity=0.104 Sum_probs=30.0
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCC--cEEEEeccC
Q 024233 21 RILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 52 (270)
Q Consensus 21 dV~IIGgG~aGl~~A~~La~~g~--~V~viE~~~ 52 (270)
+|+|||+|-.|.++|+.|+..|+ +|+++|+++
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 69999999999999999999998 899999875
No 437
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=95.44 E-value=0.019 Score=44.45 Aligned_cols=33 Identities=27% Similarity=0.410 Sum_probs=30.5
Q ss_pred eEEEEcC-CHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 21 RILVAGG-GIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 21 dV~IIGg-G~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
+|+|.|| |..|..++..|+++|++|+++.|++.
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 35 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAG 35 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSH
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCch
Confidence 5999996 99999999999999999999999853
No 438
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=95.44 E-value=0.014 Score=48.19 Aligned_cols=33 Identities=30% Similarity=0.513 Sum_probs=30.3
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCC--cEEEEeccC
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 52 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~--~V~viE~~~ 52 (270)
.+|+|||+|-+|..+|+.|+.+|+ +|+++|.+.
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 689999999999999999999998 899999975
No 439
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=95.42 E-value=0.013 Score=47.64 Aligned_cols=32 Identities=25% Similarity=0.387 Sum_probs=29.8
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 21 RILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 21 dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
+|.|||+|..|..+|..|++ |++|+++++++.
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~ 34 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFE 34 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSSTH
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHH
Confidence 69999999999999999999 999999998753
No 440
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=95.41 E-value=0.012 Score=51.70 Aligned_cols=34 Identities=21% Similarity=0.162 Sum_probs=31.2
Q ss_pred ceEEEEcCCHHHHHHHHHHHhC--CCcEEEEeccCc
Q 024233 20 LRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMS 53 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~--g~~V~viE~~~~ 53 (270)
.+|.|||.|..|+.+|..|++. |++|+++|+++.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~ 41 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNES 41 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHH
Confidence 4899999999999999999999 899999999753
No 441
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=95.41 E-value=0.016 Score=50.94 Aligned_cols=35 Identities=23% Similarity=0.349 Sum_probs=32.6
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
..+|+|||||.+|+-+|..|++.|.+|+++++.+.
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~ 225 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDL 225 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCc
Confidence 56899999999999999999999999999999864
No 442
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=95.37 E-value=0.016 Score=50.93 Aligned_cols=32 Identities=38% Similarity=0.571 Sum_probs=30.5
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 21 RILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 21 dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
+|.|||+|..|..+|..|+++|++|++++|++
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 79999999999999999999999999999974
No 443
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=95.35 E-value=0.021 Score=46.97 Aligned_cols=35 Identities=40% Similarity=0.436 Sum_probs=32.1
Q ss_pred cceEEEEcC-CHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 19 KLRILVAGG-GIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 19 ~~dV~IIGg-G~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
...|+|.|| |..|..++..|.++|++|++++|.+.
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 468999999 99999999999999999999999754
No 444
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=95.32 E-value=0.016 Score=48.03 Aligned_cols=32 Identities=25% Similarity=0.366 Sum_probs=29.9
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCC--cEEEEeccC
Q 024233 21 RILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 52 (270)
Q Consensus 21 dV~IIGgG~aGl~~A~~La~~g~--~V~viE~~~ 52 (270)
+|+|||+|.+|.++|+.|+..|+ +++++|.++
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 69999999999999999999987 899999875
No 445
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=95.31 E-value=0.049 Score=48.06 Aligned_cols=47 Identities=23% Similarity=0.227 Sum_probs=37.1
Q ss_pred hcCCccEEeCceEEEEEecCCeEEEEEcCCcEEeccEEEecCCCCchh
Q 024233 141 AVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLVGADGIWSKV 188 (270)
Q Consensus 141 ~~~~~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~ad~vI~AdG~~S~v 188 (270)
+.+.. ++.+++|+++..+++...+.+.+|+++.||.||.|.|.++..
T Consensus 269 ~~GV~-v~~~~~v~~i~~~~~v~~v~~~~g~~i~aD~Vv~a~G~~p~~ 315 (493)
T 1y56_A 269 RWGID-YVHIPNVKRVEGNEKVERVIDMNNHEYKVDALIFADGRRPDI 315 (493)
T ss_dssp HHTCE-EEECSSEEEEECSSSCCEEEETTCCEEECSEEEECCCEEECC
T ss_pred hCCcE-EEeCCeeEEEecCCceEEEEeCCCeEEEeCEEEECCCcCcCc
Confidence 34555 888999999987654445678888899999999999987653
No 446
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=95.30 E-value=0.022 Score=47.50 Aligned_cols=35 Identities=23% Similarity=0.284 Sum_probs=31.4
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCC--cEEEEeccC
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 52 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~--~V~viE~~~ 52 (270)
...+|+|||+|-+|.++|+.|+.+|+ +++++|.+.
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 54 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMKDLADELALVDVIE 54 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCCh
Confidence 44689999999999999999999998 799999864
No 447
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=95.30 E-value=0.019 Score=46.03 Aligned_cols=33 Identities=15% Similarity=0.222 Sum_probs=30.8
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
.+|.|||.|-.|..+|..|++.|.+|.++++++
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~ 36 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSL 36 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCH
Confidence 479999999999999999999999999999875
No 448
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=95.29 E-value=0.015 Score=47.14 Aligned_cols=34 Identities=12% Similarity=0.197 Sum_probs=31.5
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
...|+|+|+|-+|.++|..|++.|.+|+|++|+.
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 4689999999999999999999999999999984
No 449
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=95.29 E-value=0.021 Score=47.89 Aligned_cols=33 Identities=24% Similarity=0.253 Sum_probs=30.9
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
..|.|||.|..|.++|..|++.|++|+++++++
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 479999999999999999999999999999875
No 450
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=95.28 E-value=0.016 Score=48.81 Aligned_cols=36 Identities=17% Similarity=0.360 Sum_probs=32.6
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCC-cEEEEeccCcc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDMSA 54 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~-~V~viE~~~~~ 54 (270)
..+|+|||+|-.|+.+|..|++.|. +++|+|.+...
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~Ve 154 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQIE 154 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBCC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcCc
Confidence 4689999999999999999999998 79999998643
No 451
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=95.26 E-value=0.018 Score=50.34 Aligned_cols=35 Identities=20% Similarity=0.122 Sum_probs=32.1
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
....|+|||||.+|...|..|.+.|.+|+|+++..
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~ 45 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNALTF 45 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCC
Confidence 35689999999999999999999999999999864
No 452
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=95.25 E-value=0.015 Score=50.34 Aligned_cols=34 Identities=24% Similarity=0.346 Sum_probs=31.8
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
.+..|||.|..|+.+|..|+++|++|+++|+++.
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~ 45 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQ 45 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 5789999999999999999999999999999864
No 453
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=95.23 E-value=0.018 Score=46.74 Aligned_cols=36 Identities=22% Similarity=0.151 Sum_probs=32.5
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCC-cEEEEeccCc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDMS 53 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~-~V~viE~~~~ 53 (270)
....++|+|+|-+|.++|..|++.|. +|+|+.|...
T Consensus 116 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~ 152 (277)
T 3don_A 116 EDAYILILGAGGASKGIANELYKIVRPTLTVANRTMS 152 (277)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGG
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHH
Confidence 34689999999999999999999999 8999999854
No 454
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=95.20 E-value=0.028 Score=44.76 Aligned_cols=36 Identities=19% Similarity=0.164 Sum_probs=31.2
Q ss_pred CCcceEEEEcC-CHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 17 NKKLRILVAGG-GIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 17 ~~~~dV~IIGg-G~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
...+.|+|.|| |-.|..+|..|+++|++|++++|+.
T Consensus 17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~ 53 (249)
T 1o5i_A 17 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNE 53 (249)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 34567888887 7899999999999999999999874
No 455
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=95.19 E-value=0.025 Score=47.41 Aligned_cols=34 Identities=15% Similarity=0.273 Sum_probs=30.3
Q ss_pred cceEEEEcC-CHHHHHHHHHHHhCCC--cEEEEeccC
Q 024233 19 KLRILVAGG-GIGGLVFALAAKRKGF--EVLVFEKDM 52 (270)
Q Consensus 19 ~~dV~IIGg-G~aGl~~A~~La~~g~--~V~viE~~~ 52 (270)
..+|+|||+ |-+|.++|+.|+.+|. +|+++|.+.
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~ 44 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFA 44 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCH
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCc
Confidence 458999998 9999999999999985 799999863
No 456
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=95.18 E-value=0.024 Score=44.02 Aligned_cols=33 Identities=36% Similarity=0.581 Sum_probs=30.5
Q ss_pred eEEEEcC-CHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 21 RILVAGG-GIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 21 dV~IIGg-G~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
+|+|.|| |..|..++..|+++|++|+++.|++.
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 35 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQ 35 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccc
Confidence 5999998 99999999999999999999999753
No 457
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=95.18 E-value=0.068 Score=46.26 Aligned_cols=40 Identities=18% Similarity=0.152 Sum_probs=27.6
Q ss_pred cCCccEEeCceEEEEEecCCeEEEEE--cC-----CcEEeccEEEecCCC
Q 024233 142 VGDEIILNESNVIDFKDHGDKVSVVL--EN-----GQCYAGDLLVGADGI 184 (270)
Q Consensus 142 ~~~~~i~~~~~v~~i~~~~~~~~v~~--~~-----g~~~~ad~vI~AdG~ 184 (270)
.+.. ++.+++|+++.. +++.+.. .+ +.++.+|.+|.|.|.
T Consensus 221 ~gI~-~~~~~~v~~v~~--~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~ 267 (437)
T 3sx6_A 221 EGIE-AYTNCKVTKVED--NKMYVTQVDEKGETIKEMVLPVKFGMMIPAF 267 (437)
T ss_dssp TTCE-EECSEEEEEEET--TEEEEEEECTTSCEEEEEEEECSEEEEECCE
T ss_pred CCCE-EEcCCEEEEEEC--CeEEEEecccCCccccceEEEEeEEEEcCCC
Confidence 3445 778888888854 4454443 23 467999999999874
No 458
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=95.17 E-value=0.05 Score=47.56 Aligned_cols=36 Identities=25% Similarity=0.478 Sum_probs=32.2
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCC-cEEEEeccCc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDMS 53 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~-~V~viE~~~~ 53 (270)
..+||+|||||++|+++|+.|++.|+ +|+|+|+.+.
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~ 39 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDH 39 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCC
Confidence 35799999999999999999999999 8999999854
No 459
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=95.17 E-value=0.018 Score=46.76 Aligned_cols=34 Identities=24% Similarity=0.377 Sum_probs=31.5
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
..+|+|||+|-+|.++|..|++.|.+|++++|++
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 4689999999999999999999999999999984
No 460
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=95.15 E-value=0.46 Score=40.98 Aligned_cols=36 Identities=17% Similarity=0.332 Sum_probs=33.5
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
..+||+|||||++|+++|+.|+++|++|+|+|+++.
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~ 40 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPY 40 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCC
Confidence 458999999999999999999999999999999864
No 461
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=95.14 E-value=0.02 Score=50.16 Aligned_cols=35 Identities=37% Similarity=0.252 Sum_probs=32.1
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
....|+|+|+|.+|.++|..|+..|.+|+++|+++
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 34689999999999999999999999999999875
No 462
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=95.14 E-value=0.026 Score=46.41 Aligned_cols=35 Identities=23% Similarity=0.198 Sum_probs=32.3
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
....|.|||+|.+|..+|..|...|.+|+++++.+
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 45689999999999999999999999999999974
No 463
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=95.12 E-value=0.026 Score=46.18 Aligned_cols=35 Identities=23% Similarity=0.171 Sum_probs=32.2
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
....|.|||.|.+|..+|..|+..|.+|+++++.+
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 34689999999999999999999999999999974
No 464
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=95.11 E-value=0.04 Score=46.85 Aligned_cols=36 Identities=28% Similarity=0.455 Sum_probs=32.5
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
....|+|||+|-.|..++..+.+.|++|+++|..+.
T Consensus 11 ~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 11 FGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSED 46 (377)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 346899999999999999999999999999998753
No 465
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=95.11 E-value=0.034 Score=43.17 Aligned_cols=34 Identities=9% Similarity=0.221 Sum_probs=30.5
Q ss_pred ceEEEEcC-CHHHHHHHHHHH-hCCCcEEEEeccCc
Q 024233 20 LRILVAGG-GIGGLVFALAAK-RKGFEVLVFEKDMS 53 (270)
Q Consensus 20 ~dV~IIGg-G~aGl~~A~~La-~~g~~V~viE~~~~ 53 (270)
+.|+|.|| |-.|..+|..|+ +.|++|+++.|++.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~ 41 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLK 41 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHH
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCcc
Confidence 45999995 999999999999 89999999999854
No 466
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=95.10 E-value=0.025 Score=46.12 Aligned_cols=33 Identities=30% Similarity=0.550 Sum_probs=30.5
Q ss_pred eEEEEcC-CHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 21 RILVAGG-GIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 21 dV~IIGg-G~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
+|+|.|| |..|..++..|.++|++|+++-|++.
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~ 35 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG 35 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 6999998 99999999999999999999988753
No 467
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=95.05 E-value=0.02 Score=45.15 Aligned_cols=36 Identities=17% Similarity=0.215 Sum_probs=31.8
Q ss_pred CcceEEEEc-CCHHHHHHHHHHHhCC-CcEEEEeccCc
Q 024233 18 KKLRILVAG-GGIGGLVFALAAKRKG-FEVLVFEKDMS 53 (270)
Q Consensus 18 ~~~dV~IIG-gG~aGl~~A~~La~~g-~~V~viE~~~~ 53 (270)
+...|+|.| +|-.|..++..|+++| ++|+++.|++.
T Consensus 22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~ 59 (236)
T 3qvo_A 22 HMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPA 59 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGG
T ss_pred cccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChh
Confidence 346799999 5999999999999999 89999999864
No 468
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=95.05 E-value=0.025 Score=45.86 Aligned_cols=40 Identities=20% Similarity=0.037 Sum_probs=31.6
Q ss_pred CCCCCCcceEEEEcC-CH--HHHHHHHHHHhCCCcEEEEeccC
Q 024233 13 SDSENKKLRILVAGG-GI--GGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 13 ~~~~~~~~dV~IIGg-G~--aGl~~A~~La~~g~~V~viE~~~ 52 (270)
.|.....+.|+|.|| |. .|.++|..|+++|.+|++++++.
T Consensus 20 ~M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~ 62 (280)
T 3nrc_A 20 HMGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ 62 (280)
T ss_dssp --CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT
T ss_pred cccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch
Confidence 344444567888886 55 89999999999999999999985
No 469
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=95.04 E-value=0.031 Score=50.05 Aligned_cols=36 Identities=17% Similarity=0.276 Sum_probs=32.7
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCC-cEEEEeccCcc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDMSA 54 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~-~V~viE~~~~~ 54 (270)
..+|+|||+|-.|+.+|..|++.|. +++|+|.+...
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~Ve 363 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVS 363 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSBCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCccc
Confidence 4689999999999999999999998 79999998653
No 470
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=95.03 E-value=0.024 Score=50.86 Aligned_cols=36 Identities=17% Similarity=0.276 Sum_probs=32.9
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCC-cEEEEeccCcc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDMSA 54 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~-~V~viE~~~~~ 54 (270)
..+|+|||+|-.|+.+|..|++.|. +++|+|.+...
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~Ve 362 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVS 362 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCc
Confidence 4689999999999999999999998 79999998643
No 471
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=94.98 E-value=0.02 Score=45.91 Aligned_cols=30 Identities=23% Similarity=0.228 Sum_probs=28.4
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEec
Q 024233 21 RILVAGGGIGGLVFALAAKRKGFEVLVFEK 50 (270)
Q Consensus 21 dV~IIGgG~aGl~~A~~La~~g~~V~viE~ 50 (270)
+|.|||+|-.|..+|..|++.|++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 689999999999999999999999999877
No 472
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=94.98 E-value=0.07 Score=46.06 Aligned_cols=41 Identities=12% Similarity=-0.035 Sum_probs=28.9
Q ss_pred cCCccEEeCceEEEEEecCCeEEEEEc--CCcEEeccEEEecCCCC
Q 024233 142 VGDEIILNESNVIDFKDHGDKVSVVLE--NGQCYAGDLLVGADGIW 185 (270)
Q Consensus 142 ~~~~~i~~~~~v~~i~~~~~~~~v~~~--~g~~~~ad~vI~AdG~~ 185 (270)
.+.+ ++.+++|++++. +++++... +++++.+|.||.|.|..
T Consensus 213 ~GV~-i~~~~~v~~v~~--~~v~~~~~~~~g~~i~~D~vv~a~G~~ 255 (430)
T 3h28_A 213 RNID-WIANVAVKAIEP--DKVIYEDLNGNTHEVPAKFTMFMPSFQ 255 (430)
T ss_dssp TTCE-EECSCEEEEECS--SEEEEECTTSCEEEEECSEEEEECEEE
T ss_pred CCCE-EEeCCEEEEEeC--CeEEEEecCCCceEEeeeEEEECCCCc
Confidence 3555 888999999854 34444321 26789999999998864
No 473
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=94.97 E-value=0.025 Score=46.81 Aligned_cols=35 Identities=17% Similarity=0.133 Sum_probs=31.6
Q ss_pred CcceEEEEcCC-HHHHHHHHHHHhCCCcEEEEeccC
Q 024233 18 KKLRILVAGGG-IGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 18 ~~~dV~IIGgG-~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
...+|+|||+| ++|..+|..|.+.|.+|++++|+.
T Consensus 176 ~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~ 211 (320)
T 1edz_A 176 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNN 211 (320)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSE
T ss_pred CCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCch
Confidence 45799999999 689999999999999999998873
No 474
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=94.95 E-value=0.025 Score=46.14 Aligned_cols=33 Identities=12% Similarity=0.333 Sum_probs=30.2
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
...++|+|+|-+|.++|..|++.| +|++++|+.
T Consensus 128 ~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~ 160 (287)
T 1nvt_A 128 DKNIVIYGAGGAARAVAFELAKDN-NIIIANRTV 160 (287)
T ss_dssp SCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHCC-CEEEEECCH
Confidence 458999999999999999999999 999998874
No 475
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=94.94 E-value=0.027 Score=46.92 Aligned_cols=35 Identities=20% Similarity=0.357 Sum_probs=30.9
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCC--cEEEEeccC
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 52 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~--~V~viE~~~ 52 (270)
++.+|+|||+|-+|.++|+.|+..+. ++.++|.+.
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~ 44 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFK 44 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCc
Confidence 34699999999999999999998886 799999863
No 476
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=94.93 E-value=0.05 Score=47.75 Aligned_cols=36 Identities=31% Similarity=0.547 Sum_probs=33.6
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
..+||+|||||++||++|+.|+++|++|+|||+.+.
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~ 45 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTR 45 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCC
Confidence 457999999999999999999999999999999864
No 477
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=94.92 E-value=0.038 Score=47.71 Aligned_cols=36 Identities=31% Similarity=0.468 Sum_probs=32.5
Q ss_pred CCcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 17 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 17 ~~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
....+|+|+|||..|..++..+.+.|++|+++|.++
T Consensus 33 ~~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~ 68 (419)
T 4e4t_A 33 LPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDP 68 (419)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 345689999999999999999999999999999764
No 478
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=94.91 E-value=0.04 Score=46.97 Aligned_cols=36 Identities=33% Similarity=0.503 Sum_probs=32.5
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
....|+|||+|..|..+|..+.+.|++|+++|..+.
T Consensus 13 ~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~ 48 (389)
T 3q2o_A 13 PGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKN 48 (389)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC
Confidence 446899999999999999999999999999998753
No 479
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=94.90 E-value=0.031 Score=46.72 Aligned_cols=34 Identities=26% Similarity=0.313 Sum_probs=31.2
Q ss_pred cceEEEEcC-CHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 19 KLRILVAGG-GIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 19 ~~dV~IIGg-G~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
+..|+|.|| |..|..++..|.++|++|+++.|++
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 458999999 9999999999999999999999975
No 480
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=94.89 E-value=0.031 Score=47.36 Aligned_cols=34 Identities=26% Similarity=0.248 Sum_probs=31.2
Q ss_pred ceEEEEcC-CHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 20 LRILVAGG-GIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 20 ~dV~IIGg-G~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
..|+|.|| |..|..++..|.++|++|++++|...
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~ 63 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSS 63 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCS
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCc
Confidence 57999998 99999999999999999999998753
No 481
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=94.89 E-value=0.035 Score=44.82 Aligned_cols=35 Identities=14% Similarity=-0.012 Sum_probs=31.0
Q ss_pred CcceEEEEcC---CHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 18 KKLRILVAGG---GIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 18 ~~~dV~IIGg---G~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
..+.|+|.|| |-.|..+|..|+++|.+|++++|+.
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~ 42 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE 42 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESST
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3457999997 5899999999999999999999875
No 482
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=94.88 E-value=0.034 Score=46.01 Aligned_cols=34 Identities=18% Similarity=0.404 Sum_probs=31.4
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCC-cEEEEecc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKD 51 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~-~V~viE~~ 51 (270)
....++|+|+|-+|.++|..|++.|. +|+|+.|.
T Consensus 153 ~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 153 IGKKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred cCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 45689999999999999999999998 89999998
No 483
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=94.87 E-value=0.042 Score=45.52 Aligned_cols=35 Identities=31% Similarity=0.467 Sum_probs=31.4
Q ss_pred CcceEEEEcC-CHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 18 KKLRILVAGG-GIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 18 ~~~dV~IIGg-G~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
....|+|.|| |..|..++..|+++|++|++++|..
T Consensus 19 ~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~ 54 (330)
T 2pzm_A 19 SHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFA 54 (330)
T ss_dssp TCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 3457999998 9999999999999999999999964
No 484
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=94.87 E-value=0.031 Score=46.83 Aligned_cols=36 Identities=31% Similarity=0.425 Sum_probs=30.4
Q ss_pred CcceEEEEcC-CHHHHHHHHHHHhCC-CcEEEEeccCc
Q 024233 18 KKLRILVAGG-GIGGLVFALAAKRKG-FEVLVFEKDMS 53 (270)
Q Consensus 18 ~~~dV~IIGg-G~aGl~~A~~La~~g-~~V~viE~~~~ 53 (270)
....|+|.|| |..|..++..|.++| ++|++++|...
T Consensus 45 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~ 82 (357)
T 2x6t_A 45 EGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKD 82 (357)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCC
Confidence 3467999998 999999999999999 89999998753
No 485
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=94.87 E-value=0.034 Score=45.32 Aligned_cols=35 Identities=26% Similarity=0.252 Sum_probs=31.6
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCC-cEEEEeccC
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 52 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~-~V~viE~~~ 52 (270)
....|+|+|+|-+|.++|..|++.|. +|+|+.|+.
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 35689999999999999999999999 699999884
No 486
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=94.87 E-value=0.024 Score=46.21 Aligned_cols=33 Identities=27% Similarity=0.485 Sum_probs=29.8
Q ss_pred ceEEEEcCCHHHHHHHHHHHhC--CCcEEEEeccC
Q 024233 20 LRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDM 52 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~--g~~V~viE~~~ 52 (270)
.+|.|||+|..|.++|..|++. |.+|+++|+++
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 41 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSD 41 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSH
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCH
Confidence 5799999999999999999988 57899999874
No 487
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=94.86 E-value=0.027 Score=47.51 Aligned_cols=40 Identities=18% Similarity=0.254 Sum_probs=32.2
Q ss_pred CCCCCcceEEEEcC-CHHHHHHHHHHHhC-CCcEEEEeccCc
Q 024233 14 DSENKKLRILVAGG-GIGGLVFALAAKRK-GFEVLVFEKDMS 53 (270)
Q Consensus 14 ~~~~~~~dV~IIGg-G~aGl~~A~~La~~-g~~V~viE~~~~ 53 (270)
|..++...|+|.|| |..|..++..|.++ |++|++++|.+.
T Consensus 19 ~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~ 60 (372)
T 3slg_A 19 PGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTD 60 (372)
T ss_dssp ----CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCT
T ss_pred CcccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChh
Confidence 33345578999995 99999999999998 999999999754
No 488
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=94.83 E-value=0.027 Score=43.81 Aligned_cols=34 Identities=26% Similarity=0.423 Sum_probs=31.4
Q ss_pred ceEEEEcC-CHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 20 LRILVAGG-GIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 20 ~dV~IIGg-G~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
..|+|.|| |..|..++..|.++|++|+++.|++.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPE 39 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGG
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcc
Confidence 47999996 99999999999999999999999864
No 489
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=94.82 E-value=0.018 Score=47.08 Aligned_cols=32 Identities=25% Similarity=0.276 Sum_probs=29.8
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
.+|.|||+|..|..+|..|++.|++|++++ ++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~ 35 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IG 35 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CH
Confidence 479999999999999999999999999999 64
No 490
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=94.81 E-value=0.03 Score=50.29 Aligned_cols=35 Identities=23% Similarity=0.265 Sum_probs=32.9
Q ss_pred ceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCcc
Q 024233 20 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSA 54 (270)
Q Consensus 20 ~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~~ 54 (270)
.+++|||+|-.|..+|..|.+.|++|+++|+++..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~ 383 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESP 383 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHH
Confidence 68999999999999999999999999999999753
No 491
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=94.80 E-value=0.034 Score=44.54 Aligned_cols=33 Identities=18% Similarity=0.362 Sum_probs=31.0
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCC-cEEEEeccCc
Q 024233 21 RILVAGGGIGGLVFALAAKRKGF-EVLVFEKDMS 53 (270)
Q Consensus 21 dV~IIGgG~aGl~~A~~La~~g~-~V~viE~~~~ 53 (270)
+++|||+|-+|.+++..|++.|. +|+|++|++.
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ 143 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIE 143 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHH
Confidence 89999999999999999999998 8999999854
No 492
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=94.74 E-value=0.041 Score=46.46 Aligned_cols=34 Identities=18% Similarity=0.227 Sum_probs=31.3
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEecc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 51 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~ 51 (270)
..+.|+|+|.|-+|..+|..|.+.|.+|++.|++
T Consensus 172 ~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~ 205 (364)
T 1leh_A 172 EGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVN 205 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCC
Confidence 4468999999999999999999999999999875
No 493
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=94.71 E-value=0.04 Score=45.69 Aligned_cols=34 Identities=24% Similarity=0.389 Sum_probs=30.9
Q ss_pred ceEEEEcC-CHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 20 LRILVAGG-GIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 20 ~dV~IIGg-G~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
..|+|.|| |..|..++..|.++|++|++++|++.
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 48 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSS 48 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChH
Confidence 37999996 99999999999999999999999754
No 494
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=94.70 E-value=0.041 Score=44.77 Aligned_cols=35 Identities=17% Similarity=0.126 Sum_probs=31.6
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCC-cEEEEeccC
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 52 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~-~V~viE~~~ 52 (270)
....++|+|+|-+|.++|..|++.|. +|+|+.|..
T Consensus 125 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 160 (281)
T 3o8q_A 125 KGATILLIGAGGAARGVLKPLLDQQPASITVTNRTF 160 (281)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSH
T ss_pred cCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCH
Confidence 35689999999999999999999997 899999874
No 495
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=94.69 E-value=0.055 Score=43.76 Aligned_cols=36 Identities=25% Similarity=0.242 Sum_probs=30.7
Q ss_pred CCcceEEEEcC-CHHHHHHHHHHHhCCCcEEEEeccC
Q 024233 17 NKKLRILVAGG-GIGGLVFALAAKRKGFEVLVFEKDM 52 (270)
Q Consensus 17 ~~~~dV~IIGg-G~aGl~~A~~La~~g~~V~viE~~~ 52 (270)
...+.++|.|| |-.|.++|..|+++|.+|++++|+.
T Consensus 27 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~ 63 (276)
T 2b4q_A 27 LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDA 63 (276)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34457888886 7899999999999999999999874
No 496
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=94.69 E-value=0.023 Score=47.33 Aligned_cols=37 Identities=24% Similarity=0.444 Sum_probs=30.0
Q ss_pred CCCcceEEEEcC-CHHHHHHHHHHHhCC--CcEEEEeccC
Q 024233 16 ENKKLRILVAGG-GIGGLVFALAAKRKG--FEVLVFEKDM 52 (270)
Q Consensus 16 ~~~~~dV~IIGg-G~aGl~~A~~La~~g--~~V~viE~~~ 52 (270)
.+....|+|.|| |..|..++..|.++| ++|+.+++..
T Consensus 21 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~ 60 (346)
T 4egb_A 21 QSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALT 60 (346)
T ss_dssp ---CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCC
T ss_pred ccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccc
Confidence 344568999999 999999999999999 6788888764
No 497
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=94.68 E-value=0.03 Score=49.26 Aligned_cols=36 Identities=33% Similarity=0.241 Sum_probs=32.5
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCCcEEEEeccCc
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 53 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~~V~viE~~~~ 53 (270)
....|+|||.|.+|..+|..|...|.+|+++|+++.
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~ 308 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPI 308 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 346899999999999999999999999999999853
No 498
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=94.67 E-value=0.041 Score=44.52 Aligned_cols=35 Identities=26% Similarity=0.339 Sum_probs=31.6
Q ss_pred CcceEEEEcCCHHHHHHHHHHHhCCC-cEEEEeccC
Q 024233 18 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 52 (270)
Q Consensus 18 ~~~dV~IIGgG~aGl~~A~~La~~g~-~V~viE~~~ 52 (270)
....++|+|+|-+|.++|..|++.|. +|+|+.|..
T Consensus 119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~ 154 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDM 154 (272)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 45689999999999999999999996 899999874
No 499
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=94.66 E-value=0.035 Score=46.05 Aligned_cols=34 Identities=21% Similarity=0.472 Sum_probs=30.5
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCC--cEEEEeccC
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 52 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~--~V~viE~~~ 52 (270)
..+|+|||+|-+|.++|+.|+..+. ++.++|.+.
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 40 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVK 40 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCc
Confidence 3689999999999999999999887 799999863
No 500
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=94.65 E-value=0.044 Score=47.45 Aligned_cols=36 Identities=25% Similarity=0.352 Sum_probs=32.7
Q ss_pred cceEEEEcCCHHHHHHHHHHHhCCC-cEEEEeccCcc
Q 024233 19 KLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDMSA 54 (270)
Q Consensus 19 ~~dV~IIGgG~aGl~~A~~La~~g~-~V~viE~~~~~ 54 (270)
..+|+|||+|-.|+.+|..|++.|. +++|+|.+...
T Consensus 40 ~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D~Ve 76 (434)
T 1tt5_B 40 TCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTID 76 (434)
T ss_dssp TCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCBCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCCEec
Confidence 4689999999999999999999999 79999988643
Done!