BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024235
(270 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9XF89|CB5_ARATH Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis
thaliana GN=LHCB5 PE=2 SV=1
Length = 280
Score = 388 bits (996), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/226 (86%), Positives = 209/226 (92%)
Query: 45 TKSSPSGMVSPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYE 104
T + PDRRIFLP+GLLDRSEIPEYL GEV GDYGYDPFGL KKP++F+KYQA+E
Sbjct: 55 TSDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFE 114
Query: 105 LIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFA 164
LIHARWAMLGAAGFIIPEA NK+GANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLV A
Sbjct: 115 LIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVLA 174
Query: 165 VIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMF 224
V+AE+VL+GGAEYYRITNGLD EDKLHPGGPFDPLGLAKDP+Q ALLKVKEIKNGRLAMF
Sbjct: 175 VVAEVVLLGGAEYYRITNGLDFEDKLHPGGPFDPLGLAKDPEQGALLKVKEIKNGRLAMF 234
Query: 225 AMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 270
AMLGFF+QAYVTGEGPVENLAKHLSDPF NNLLTVI+G AERAPTL
Sbjct: 235 AMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVIAGTAERAPTL 280
>sp|P27517|CB2_DUNTE Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Dunaliella tertiolecta PE=2 SV=1
Length = 253
Score = 213 bits (541), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 112/208 (53%), Positives = 137/208 (65%), Gaps = 9/208 (4%)
Query: 55 PDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLG 114
PDR FL G ++ PEYLTGE PGDYG+D GLS P F++Y+ ELIHARWA+LG
Sbjct: 36 PDRAKFL--GPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALLG 93
Query: 115 AAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPIN---LVFAVIAEIVL 171
A G + PE +++ E VWFK GA + LNY G I+ ++ + ++VL
Sbjct: 94 ALGILTPELLSQYAGVQFGEPVWFKAGAQIFADGGLNYLGNESLIHAQSIIATLAVQVVL 153
Query: 172 VGGAEYYRITNG----LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAML 227
+G AE YR G LD D L+PGGPFDPLGLA DPD FA LKVKEIKNGRLAMF+ L
Sbjct: 154 MGLAEAYRANGGSEGFLDDLDTLYPGGPFDPLGLADDPDTFAELKVKEIKNGRLAMFSCL 213
Query: 228 GFFLQAYVTGEGPVENLAKHLSDPFANN 255
GFF+QA VTG+GPV+NL HL+DP N
Sbjct: 214 GFFVQAIVTGKGPVQNLTDHLADPTVNK 241
>sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 member 1B, chloroplastic
OS=Pinus sylvestris PE=2 SV=1
Length = 274
Score = 204 bits (519), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 113/227 (49%), Positives = 147/227 (64%), Gaps = 10/227 (4%)
Query: 35 SLSPSPSPPLTKS-SPSGMVSPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKK 93
++ + + LT S S S PDR ++L E P YLTGE PGDYG+D GLS
Sbjct: 40 TMRKATTKKLTASASTSPWYGPDRVLYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSAD 96
Query: 94 PDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYF 153
P++F+K + E+IH RWAMLGA G + PE + G G EAVWFK GA + L+Y
Sbjct: 97 PENFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYL 155
Query: 154 GKN--IPINLVFAVIA-EIVLVGGAEYYRITNG--LDLEDKLHPGGPFDPLGLAKDPDQF 208
G + + A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA+DP+ F
Sbjct: 156 GNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAEDPEAF 215
Query: 209 ALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 255
A LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 216 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 262
>sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa
subsp. japonica GN=CAB1R PE=2 SV=2
Length = 265
Score = 204 bits (519), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 122/255 (47%), Positives = 157/255 (61%), Gaps = 20/255 (7%)
Query: 15 TLLLSSPLLS--SPRRKPPL-------LPSLSPSPSPPLTKSSPSGMVSPDRRIFLPEGL 65
T+ LSSP+++ +P L + + P P + SP DR ++L G
Sbjct: 5 TMALSSPVMARAAPSTSSALFGEARITMRKTAAKPKPAASSGSP--WYGADRVLYL--GP 60
Query: 66 LDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFN 125
L E P YLTGE PGDYG+D GLS P+ F+K + E+IH+RWAMLGA G + PE
Sbjct: 61 LS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLA 119
Query: 126 KFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITN 182
+ G G EAVWFK G+ + L+Y G I + A+ A ++VL+G E YRI
Sbjct: 120 RNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAG 178
Query: 183 G--LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGP 240
G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP
Sbjct: 179 GPLGEVVDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 238
Query: 241 VENLAKHLSDPFANN 255
+ENLA HL+DP NN
Sbjct: 239 LENLADHLADPVNNN 253
>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum
lycopersicum GN=CAB1B PE=3 SV=1
Length = 265
Score = 204 bits (519), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 124/259 (47%), Positives = 155/259 (59%), Gaps = 28/259 (10%)
Query: 15 TLLLSSPLLSSPRRKPPLLPSLSPSPS-----------PPLTKSSPSG--MVSPDRRIFL 61
T+ LSSP + K LSPS S + KS+PS PDR +L
Sbjct: 5 TMALSSPSFAGQAVK------LSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYL 58
Query: 62 PEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIP 121
E P YLTGE PGDYG+D GLS P+ F+K + E+IH RWAMLGA G + P
Sbjct: 59 GP---FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 115
Query: 122 EAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYY 178
E + G G EAVWFK G+ + L+Y G + + A+ A ++VL+G E Y
Sbjct: 116 ELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGY 174
Query: 179 RITNG--LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVT 236
RI G ++ D L+PGG FDPLGLA+DP+ FA LKVKEIKNGRLAMF+M GFF+QA VT
Sbjct: 175 RIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVT 234
Query: 237 GEGPVENLAKHLSDPFANN 255
G+GP+ENLA HL+DP NN
Sbjct: 235 GKGPLENLADHLADPVNNN 253
>sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum
GN=CAB8 PE=1 SV=1
Length = 268
Score = 204 bits (518), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 120/260 (46%), Positives = 155/260 (59%), Gaps = 19/260 (7%)
Query: 14 QTLLLSSPLLSSPRRKPPLLPS----------LSPSPSPPLTKSSPSGMVSPDRRIFLPE 63
++ LSSP L+ + PS + S + SS S PDR +L
Sbjct: 4 SSMALSSPTLTGKPVETSANPSSQELGGARFTMRKSATTKKVASSGSPWYGPDRVKYLGP 63
Query: 64 GLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEA 123
E P YLTGE PGDYG+D GLS P+ FSK + E+IH+RWAMLGA G + PE
Sbjct: 64 ---FSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPEL 120
Query: 124 FNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRI 180
++ G G EAVWFK G+ + L+Y G + + A+ A +++L+G E YRI
Sbjct: 121 LSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRI 179
Query: 181 TNG--LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGE 238
G ++ D L+PGG FDPLGLA DP+ FA LKVKE+KNGRLAMF+M GFF+QA VTG+
Sbjct: 180 AGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 239
Query: 239 GPVENLAKHLSDPFANNLLT 258
GP+ENLA HLSDP NN +
Sbjct: 240 GPLENLADHLSDPVNNNAWS 259
>sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp.
GN=CAB22R PE=3 SV=1
Length = 267
Score = 203 bits (517), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 113/225 (50%), Positives = 144/225 (64%), Gaps = 11/225 (4%)
Query: 39 SPSPPLTKSSPSGMVSPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFS 98
+ + P + SSP PDR +L E P YLTGE P DYG+D GLS P+ F+
Sbjct: 40 TKAKPASSSSP--WYGPDRVKYLGP---FSGEAPSYLTGEFPSDYGWDTAGLSADPETFA 94
Query: 99 KYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN-- 156
K + E+IH RWAMLGA G + PE F + G G EAVWFK GA + L+Y G
Sbjct: 95 KNRELEVIHCRWAMLGALGCVFPELFARNGIKFG-EAVWFKAGAQIFSEGGLDYLGNPSL 153
Query: 157 IPINLVFAVIA-EIVLVGGAEYYRITNG--LDLEDKLHPGGPFDPLGLAKDPDQFALLKV 213
+ + A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA+DP+ FA LKV
Sbjct: 154 VHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLAEDPEAFAELKV 213
Query: 214 KEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 258
KEIKNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN +
Sbjct: 214 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWS 258
>sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana
tabacum GN=CAB40 PE=2 SV=1
Length = 267
Score = 203 bits (517), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 123/258 (47%), Positives = 154/258 (59%), Gaps = 22/258 (8%)
Query: 14 QTLLLSSPLLSSPRRKPPLLPSLS-----------PSPSPPLTKSSPSGMVSPDRRIFLP 62
T+ LSSP + K L PS S + S T SS S PDR +L
Sbjct: 4 STMALSSPSFAGKAVK--LSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLG 61
Query: 63 EGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPE 122
E P YLTGE PGDYG+D GLS P+ F+K + E+IH RWAMLGA G + PE
Sbjct: 62 P---FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 118
Query: 123 AFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYR 179
+ G G EAVWFK G+ + L+Y G + + A+ A ++VL+G E YR
Sbjct: 119 LLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR 177
Query: 180 ITNG--LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTG 237
+ G ++ D L+PGG FDPLGLA+DP+ FA LKVKEIKNGRLAMF+M GFF+QA VTG
Sbjct: 178 VAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 237
Query: 238 EGPVENLAKHLSDPFANN 255
+GP+ENLA HL+DP NN
Sbjct: 238 KGPLENLADHLADPVNNN 255
>sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana
tabacum GN=CAB21 PE=2 SV=1
Length = 265
Score = 203 bits (517), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 120/255 (47%), Positives = 155/255 (60%), Gaps = 20/255 (7%)
Query: 15 TLLLSSPLLSSPRRK-PPLLP--------SLSPSPSPPLTKSSPSGMVSPDRRIFLPEGL 65
T+ LSSP + K P P S+ + + P+ SSP PDR +L
Sbjct: 5 TMALSSPSFAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSP--WYGPDRVKYLGP-- 60
Query: 66 LDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFN 125
E P YLTGE PGDYG+D GLS P+ F+K + E+IH RWAMLGA G + PE
Sbjct: 61 -FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 119
Query: 126 KFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITN 182
+ G G EAVWFK G+ + L+Y G + + A+ A +++L+G E YR+
Sbjct: 120 RNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 178
Query: 183 G--LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGP 240
G ++ D L+PGG FDPLGLA+DP+ FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP
Sbjct: 179 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 238
Query: 241 VENLAKHLSDPFANN 255
+ENLA HL+DP NN
Sbjct: 239 LENLADHLADPVNNN 253
>sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa
subsp. japonica GN=CAB2R PE=2 SV=2
Length = 261
Score = 203 bits (516), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 121/249 (48%), Positives = 154/249 (61%), Gaps = 12/249 (4%)
Query: 15 TLLLSSPLLSSPRRKPPLLP---SLSPSPSPPLTKSSPSGMVSPDRRIFLPEGLLDRSEI 71
T+ LSSP L+ ++ S + P +S S DR ++L G L E
Sbjct: 5 TMALSSPALAGKAAAKVFGEGRITMRKSAAKPKPAASGSPWYGADRVLYL--GPLS-GEP 61
Query: 72 PEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANC 131
P YLTGE PGDYG+D GLS P+ F+K + E+IH+RWAMLGA G + PE + G
Sbjct: 62 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKF 121
Query: 132 GPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNG--LDL 186
G EAVWFK G+ + L+Y G I + A+ A ++VL+G E YRI G ++
Sbjct: 122 G-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEV 180
Query: 187 EDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAK 246
D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENLA
Sbjct: 181 VDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 240
Query: 247 HLSDPFANN 255
HL+DP NN
Sbjct: 241 HLADPVNNN 249
>sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp.
GN=CAB25 PE=3 SV=1
Length = 266
Score = 203 bits (516), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 112/222 (50%), Positives = 143/222 (64%), Gaps = 11/222 (4%)
Query: 39 SPSPPLTKSSPSGMVSPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFS 98
+ + P++ SP PDR +L E P YLTGE PGDYG+D GLS P+ F+
Sbjct: 39 TKAKPVSSGSP--WYGPDRVKYLGP---FSGEAPSYLTGEFPGDYGWDTAGLSADPETFA 93
Query: 99 KYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN-- 156
K + E+IH RWAMLGA G + PE F + G G EAVWFK G+ + L+Y G
Sbjct: 94 KNRELEVIHCRWAMLGALGCVFPELFARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSL 152
Query: 157 IPINLVFAVIA-EIVLVGGAEYYRITNG--LDLEDKLHPGGPFDPLGLAKDPDQFALLKV 213
+ + A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA DP+ FA LKV
Sbjct: 153 VHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELKV 212
Query: 214 KEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 255
KEIKNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 213 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 254
>sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana
tabacum GN=CAB16 PE=2 SV=1
Length = 266
Score = 202 bits (515), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 112/227 (49%), Positives = 145/227 (63%), Gaps = 11/227 (4%)
Query: 37 SPSPSPPLTKSSPSGMVSPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDD 96
+ S + P++ SP PDR +L E P YLTGE PGDYG+D GLS P+
Sbjct: 37 TASKAKPVSSGSP--WYGPDRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPET 91
Query: 97 FSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN 156
F+K + E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G
Sbjct: 92 FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNP 150
Query: 157 --IPINLVFAVIA-EIVLVGGAEYYRITNG--LDLEDKLHPGGPFDPLGLAKDPDQFALL 211
+ + A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA+DP+ FA L
Sbjct: 151 SLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAEL 210
Query: 212 KVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 258
KVKEIKNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN +
Sbjct: 211 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWS 257
>sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea
PE=1 SV=1
Length = 267
Score = 202 bits (514), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 122/258 (47%), Positives = 153/258 (59%), Gaps = 22/258 (8%)
Query: 14 QTLLLSSPLLSSPRRKPPLLPSLS-----------PSPSPPLTKSSPSGMVSPDRRIFLP 62
T+ LSSP L+ K L P+ S + P T S S PDR +L
Sbjct: 4 STMALSSPSLAGKAVK--LGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLG 61
Query: 63 EGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPE 122
E P YLTGE PGDYG+D GLS P+ F+K + E+IH RWAMLGA G + PE
Sbjct: 62 P---FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 118
Query: 123 AFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYR 179
+ G G EAVWFK G+ + L+Y G + + A+ A +++L+G E YR
Sbjct: 119 LLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR 177
Query: 180 ITNG--LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTG 237
I G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMF+M GFF+QA VTG
Sbjct: 178 IAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 237
Query: 238 EGPVENLAKHLSDPFANN 255
+GP+ENLA HL+DP NN
Sbjct: 238 KGPLENLADHLADPVNNN 255
>sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 member 1A, chloroplastic
OS=Pinus sylvestris PE=2 SV=1
Length = 278
Score = 202 bits (514), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 109/206 (52%), Positives = 138/206 (66%), Gaps = 9/206 (4%)
Query: 55 PDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLG 114
PDR ++L E P YLTGE PGDYG+D GLS P+ F+K + E+IH+RWAMLG
Sbjct: 65 PDRVLYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLG 121
Query: 115 AAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFG--KNIPINLVFAVIA-EIVL 171
A G + PE + G G EAVWFK GA + L+Y G + I + A+ A +++L
Sbjct: 122 ALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVIL 180
Query: 172 VGGAEYYRITNG--LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGF 229
+G E YR+ G ++ D ++PGG FDPLGLA DPD FA LKVKEIKNGRLAMF+M GF
Sbjct: 181 MGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGF 240
Query: 230 FLQAYVTGEGPVENLAKHLSDPFANN 255
F+QA VTG+GP+ENLA HL+DP NN
Sbjct: 241 FVQAIVTGKGPIENLADHLADPVNNN 266
>sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum
sativum GN=AB80 PE=1 SV=1
Length = 269
Score = 202 bits (513), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 112/229 (48%), Positives = 145/229 (63%), Gaps = 9/229 (3%)
Query: 35 SLSPSPSPPLTKSSPSGMVSPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKP 94
++ S + SS S PDR +L E P YLTGE PGDYG+D GLS P
Sbjct: 36 TMRKSATTKKVASSGSPWYGPDRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADP 92
Query: 95 DDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFG 154
+ FSK + E+IH+RWAMLGA G + PE ++ G G EAVWFK G+ + L+Y G
Sbjct: 93 ETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLG 151
Query: 155 KN--IPINLVFAVIA-EIVLVGGAEYYRITNG--LDLEDKLHPGGPFDPLGLAKDPDQFA 209
+ + A+ A +++L+G E YRI G ++ D L+PGG FDPLGLA DP+ FA
Sbjct: 152 NPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFA 211
Query: 210 LLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 258
LKVKE+KNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN +
Sbjct: 212 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWS 260
>sp|P04779|CB21_PETSP Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp.
GN=CAB13 PE=3 SV=1
Length = 266
Score = 201 bits (512), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 116/260 (44%), Positives = 153/260 (58%), Gaps = 11/260 (4%)
Query: 1 MSAVLLGLQLQVHQTLLLSSPLLSSPRRKPPLLPSLSPSPSPPLTKSSPSGMVSPDRRIF 60
M+A + L ++ P S R + + + + P++ SP PDR +
Sbjct: 1 MAAATMALSSSSFAGKAVNVPSSSEITRNGKVTMRKTVTKAKPVSSGSP--WYGPDRVKY 58
Query: 61 LPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 120
L E P YLTGE PGDYG+D GLS P F+K + E+IH RW MLGA G +
Sbjct: 59 LGP---FSGEAPSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVF 115
Query: 121 PEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEY 177
PE F + G G EAVWFK G+ + L+Y G + + A+ A ++VL+G E
Sbjct: 116 PELFARNGVKFG-EAVWFKAGSQIFKEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG 174
Query: 178 YRITNG--LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYV 235
YR+ G ++ D L+PGG FDPLGLA DP+ FA L+VKEIKNGRLAMF+M GFF+QA V
Sbjct: 175 YRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELEVKEIKNGRLAMFSMFGFFVQAIV 234
Query: 236 TGEGPVENLAKHLSDPFANN 255
TG+GP+ENLA HL+DP NN
Sbjct: 235 TGKGPLENLADHLADPVNNN 254
>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum
lycopersicum GN=CAB3C PE=3 SV=1
Length = 267
Score = 201 bits (511), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 112/214 (52%), Positives = 138/214 (64%), Gaps = 9/214 (4%)
Query: 47 SSPSGMVSPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELI 106
SS S PDR +L E P YLTGE PGDYG+D GLS P+ F+K + E+I
Sbjct: 46 SSGSPWYGPDRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 102
Query: 107 HARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFA 164
H RWAMLGA G + PE + G G EAVWFK G+ + L+Y G + + A
Sbjct: 103 HCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILA 161
Query: 165 VIA-EIVLVGGAEYYRITNG--LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRL 221
+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKNGRL
Sbjct: 162 IWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRL 221
Query: 222 AMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 255
AMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 222 AMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium
hirsutum GN=CAB-151 PE=2 SV=2
Length = 265
Score = 201 bits (511), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 114/217 (52%), Positives = 142/217 (65%), Gaps = 10/217 (4%)
Query: 45 TKSSPSGM-VSPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAY 103
KS+P+ + PDR +L +IP YLTGE PGDYG+D GLS P+ F+K +
Sbjct: 41 VKSAPTSIWYGPDRPKYLGP---FSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 97
Query: 104 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 161
E+IH RWAMLGA G + PE +K G G EAVWFK G+ + L+Y G I
Sbjct: 98 EVIHCRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQS 156
Query: 162 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 218
+ A+ A ++VL+G E YR+ G E D ++PGG FDPLGLA DPD FA LKVKEIKN
Sbjct: 157 ILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKEIKN 216
Query: 219 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 255
GRLAMF+M GFF+QA VTG+GP+ENL HL+DP ANN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANN 253
>sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana
tabacum GN=CAB50 PE=2 SV=1
Length = 267
Score = 201 bits (511), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 111/225 (49%), Positives = 143/225 (63%), Gaps = 11/225 (4%)
Query: 39 SPSPPLTKSSPSGMVSPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFS 98
+ + PL+ SP PDR +L E P YLTGE PGDYG+D GLS P+ F+
Sbjct: 40 TKAKPLSSGSP--WYGPDRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPETFA 94
Query: 99 KYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN-- 156
K + E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G
Sbjct: 95 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSL 153
Query: 157 IPINLVFAVIA-EIVLVGGAEYYRITNG--LDLEDKLHPGGPFDPLGLAKDPDQFALLKV 213
+ + A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA+DP+ FA LKV
Sbjct: 154 VHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKV 213
Query: 214 KEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 258
K IKNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN +
Sbjct: 214 KHIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWS 258
>sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus
pyrifolia PE=2 SV=1
Length = 278
Score = 201 bits (511), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 108/206 (52%), Positives = 138/206 (66%), Gaps = 9/206 (4%)
Query: 55 PDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLG 114
PDR ++L E P YLTGE PGDYG+D GLS P+ F+K + E+IH+RWAMLG
Sbjct: 65 PDRVMYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLG 121
Query: 115 AAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFG--KNIPINLVFAVIA-EIVL 171
A G + PE + G G EAVWFK GA + L+Y G + I + A+ A +++L
Sbjct: 122 ALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVIL 180
Query: 172 VGGAEYYRITNG--LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGF 229
+G E YR+ G ++ D ++PGG FDPLGLA DPD FA +KVKEIKNGRLAMF+M GF
Sbjct: 181 MGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFADVKVKEIKNGRLAMFSMFGF 240
Query: 230 FLQAYVTGEGPVENLAKHLSDPFANN 255
F+QA VTG+GP+ENLA HL+DP NN
Sbjct: 241 FVQAIVTGKGPIENLADHLADPVNNN 266
>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella
patens subsp. patens PE=3 SV=1
Length = 269
Score = 200 bits (509), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 104/191 (54%), Positives = 129/191 (67%), Gaps = 6/191 (3%)
Query: 70 EIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGA 129
E P YL GE GDYG+D GLS P+ F++ + E+IHARWAMLGA G + PE K G
Sbjct: 67 ETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGV 126
Query: 130 NCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNG--L 184
G EAVWFK GA + L+Y G + + A+ A ++VL+G E YR+ G
Sbjct: 127 KFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLG 185
Query: 185 DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENL 244
++ D ++PGG FDPLGLA DPD FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENL
Sbjct: 186 EVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 245
Query: 245 AKHLSDPFANN 255
HL+DP ANN
Sbjct: 246 NDHLADPVANN 256
>sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Lemna gibba PE=3 SV=1
Length = 264
Score = 200 bits (508), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 107/191 (56%), Positives = 132/191 (69%), Gaps = 6/191 (3%)
Query: 70 EIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGA 129
+ P YLTGE PGDYG+D GLS P+ F+K + E+IH+RWAMLGA G I PE +K G
Sbjct: 63 QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGV 122
Query: 130 NCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGLDL 186
G EAVWFK GA + L+Y G + + A+ A ++VL+G E YR+ G
Sbjct: 123 QFG-EAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGGGPLG 181
Query: 187 E--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENL 244
E D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENL
Sbjct: 182 EGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENL 241
Query: 245 AKHLSDPFANN 255
A H++DP ANN
Sbjct: 242 ADHIADPVANN 252
>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa
subsp. japonica GN=RCABP89 PE=2 SV=1
Length = 263
Score = 200 bits (508), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 124/255 (48%), Positives = 160/255 (62%), Gaps = 20/255 (7%)
Query: 12 VHQTLLLSSPLLSSPRRKPPLLPSLSPSPSP----PLTKSSPSGM-VSPDRRIFLPEGLL 66
+HQT +S L ++PRR L+ + S KS+P + PDR P+ L
Sbjct: 6 LHQT---TSFLGTAPRRDE-LVRRVGDSGGRITMRRTVKSAPQSIWYGPDR----PKYLG 57
Query: 67 DRSE-IPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFN 125
SE P YLTGE PGDYG+D GLS P+ F++ + E+IH+RWAMLGA G + PE +
Sbjct: 58 PFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILS 117
Query: 126 KFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITN 182
K G G EAVWFK GA + L+Y G + + A+ A ++VL+G E YR+
Sbjct: 118 KNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGG 176
Query: 183 GLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGP 240
G E DK++PGG FDPLGLA DPD FA LKVKE+KNGRLAMF+M GFF+QA VTG+GP
Sbjct: 177 GPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 236
Query: 241 VENLAKHLSDPFANN 255
+ENL H++DP ANN
Sbjct: 237 IENLFDHVADPVANN 251
>sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa
subsp. indica GN=OsI_012078 PE=2 SV=1
Length = 263
Score = 200 bits (508), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 124/255 (48%), Positives = 160/255 (62%), Gaps = 20/255 (7%)
Query: 12 VHQTLLLSSPLLSSPRRKPPLLPSLSPSPSP----PLTKSSPSGM-VSPDRRIFLPEGLL 66
+HQT +S L ++PRR L+ + S KS+P + PDR P+ L
Sbjct: 6 LHQT---TSFLGTAPRRDE-LVRRVGDSGGRITMRRTVKSAPQSIWYGPDR----PKYLG 57
Query: 67 DRSE-IPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFN 125
SE P YLTGE PGDYG+D GLS P+ F++ + E+IH+RWAMLGA G + PE +
Sbjct: 58 PFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILS 117
Query: 126 KFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITN 182
K G G EAVWFK GA + L+Y G + + A+ A ++VL+G E YR+
Sbjct: 118 KNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGG 176
Query: 183 GLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGP 240
G E DK++PGG FDPLGLA DPD FA LKVKE+KNGRLAMF+M GFF+QA VTG+GP
Sbjct: 177 GPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 236
Query: 241 VENLAKHLSDPFANN 255
+ENL H++DP ANN
Sbjct: 237 IENLFDHVADPVANN 251
>sp|P04778|CB1C_ARATH Chlorophyll a-b binding protein 1, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.3 PE=1 SV=1
Length = 267
Score = 199 bits (507), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 121/263 (46%), Positives = 157/263 (59%), Gaps = 32/263 (12%)
Query: 14 QTLLLSSPLLSSPRRKPPLLPSLSPSPSPPLTKSSPSGMVSPDRRIFLPEG-------LL 66
T+ LSSP + K LSP+ S L SG V+ + + P+G
Sbjct: 4 STMALSSPAFAGKAVK------LSPAASEVLG----SGRVTMRKTVAKPKGPSGSPWYGS 53
Query: 67 DR--------SEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGF 118
DR E P YLTGE PGDYG+D GLS P+ F++ + E+IH+RWAMLGA G
Sbjct: 54 DRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGC 113
Query: 119 IIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGA 175
+ PE + G G EAVWFK G+ + L+Y G + + A+ A +++L+G
Sbjct: 114 VFPELLARNGVKFG-EAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAV 172
Query: 176 EYYRIT-NG--LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQ 232
E YR+ NG + ED L+PGG FDPLGLA DP+ FA LKVKE+KNGRLAMF+M GFF+Q
Sbjct: 173 EGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQ 232
Query: 233 AYVTGEGPVENLAKHLSDPFANN 255
A VTG+GP+ENLA HL+DP NN
Sbjct: 233 AIVTGKGPIENLADHLADPVNNN 255
>sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana
plumbaginifolia GN=CABC PE=3 SV=1
Length = 267
Score = 199 bits (507), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 111/224 (49%), Positives = 144/224 (64%), Gaps = 11/224 (4%)
Query: 37 SPSPSPPLTKSSPSGMVSPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDD 96
+ S + P++ SSP P+R +L E P YLTGE PGDYG+D GLS P+
Sbjct: 38 TASKAKPVSSSSP--WYGPNRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPET 92
Query: 97 FSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN 156
F+K + E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G
Sbjct: 93 FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKGGSQIFSQGGLDYLGNP 151
Query: 157 --IPINLVFAVIA-EIVLVGGAEYYRITNG--LDLEDKLHPGGPFDPLGLAKDPDQFALL 211
+ + A+ A ++VL+G E YR+ ++ D L+PGG FDPLGLA+DP+ FA L
Sbjct: 152 SLVHAQSILAIWACQVVLMGAVEGYRVAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAEL 211
Query: 212 KVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 255
KVKEIKNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 212 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays
GN=CAB1 PE=3 SV=1
Length = 262
Score = 199 bits (507), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 111/218 (50%), Positives = 141/218 (64%), Gaps = 9/218 (4%)
Query: 43 PLTKSSPSGMVSPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQA 102
P +S S PDR +L E P YLTGE PGDYG+D GLS P+ F+K +
Sbjct: 37 PKVAASGSPWYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 93
Query: 103 YELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPIN 160
E+IH+RWAMLGA G + PE ++ G G EAVWFK G+ + L+Y G I
Sbjct: 94 LEVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQ 152
Query: 161 LVFAVIA-EIVLVGGAEYYRITNG--LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 217
+ A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKE+K
Sbjct: 153 SILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELK 212
Query: 218 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 255
NGRLAMF+M GFF+QA VTG+GP+ENLA H++DP NN
Sbjct: 213 NGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNN 250
>sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays
GN=CAB-M9 PE=2 SV=1
Length = 265
Score = 199 bits (506), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 112/214 (52%), Positives = 142/214 (66%), Gaps = 9/214 (4%)
Query: 47 SSPSGMVSPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELI 106
SS S PDR ++L G L E P YLTGE PGDYG+D GLS P+ F+K + E+I
Sbjct: 44 SSGSPWYGPDRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 100
Query: 107 HARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFA 164
H+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G I + A
Sbjct: 101 HSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILA 159
Query: 165 VIA-EIVLVGGAEYYRITNG--LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRL 221
+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA DP+ FA +KVKE+KNGRL
Sbjct: 160 IWACQVVLMGAIEGYRVAGGPLGEVVDPLYPGGTFDPLGLADDPEAFADVKVKELKNGRL 219
Query: 222 AMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 255
AMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 220 AMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII type I, chloroplastic
(Fragment) OS=Cucumis sativus PE=2 SV=1
Length = 255
Score = 199 bits (506), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 110/214 (51%), Positives = 140/214 (65%), Gaps = 9/214 (4%)
Query: 47 SSPSGMVSPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELI 106
SS S PDR +L E P YLTGE PGDYG+D GLS P+ F+K + E+I
Sbjct: 34 SSGSPWYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 90
Query: 107 HARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFA 164
H+RWAMLGA G + PE ++ G G EAVWFK G+ + L+Y G + + A
Sbjct: 91 HSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILA 149
Query: 165 VIA-EIVLVGGAEYYRITNG--LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRL 221
+ A ++VL+G E YRI G ++ D ++PGG FDPLGLA DP+ FA LKVKE+KNGRL
Sbjct: 150 IWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRL 209
Query: 222 AMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 255
AMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 210 AMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 243
>sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana
plumbaginifolia GN=CABE PE=3 SV=1
Length = 266
Score = 198 bits (504), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 110/221 (49%), Positives = 141/221 (63%), Gaps = 11/221 (4%)
Query: 43 PLTKSSPSGMVSPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQA 102
P++ SP PDR +L E P YLTGE PGDYG+D GLS P+ F+K +
Sbjct: 43 PVSSGSP--WYGPDRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 97
Query: 103 YELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPIN 160
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 98 LEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQ 156
Query: 161 LVFAVIA-EIVLVGGAEYYRITNG--LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 217
+ A+ A ++VL+G E YR+ ++ D L+PGG FDPLGLA+DP+ FA LKVKEIK
Sbjct: 157 SILAIWACQVVLMGAVEGYRVAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIK 216
Query: 218 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 258
NGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN +
Sbjct: 217 NGRLAMFSMFGFFVQALVTGKGPLENLADHLADPVNNNAWS 257
>sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloroplastic (Fragment)
OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1
Length = 237
Score = 198 bits (504), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 104/191 (54%), Positives = 132/191 (69%), Gaps = 6/191 (3%)
Query: 70 EIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGA 129
+ P YLTGE PGDYG+D GLS P+ F++ + E+IH RWAMLGA G + PE +K G
Sbjct: 36 QTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGV 95
Query: 130 NCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGLDL 186
G EAVWFK G+ + L+Y G I + A+ A ++VL+G E YR+ G
Sbjct: 96 TFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRVGGGPLG 154
Query: 187 E--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENL 244
E DK++PGG FDPLGLA DP+ FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENL
Sbjct: 155 EGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENL 214
Query: 245 AKHLSDPFANN 255
+ H++DP ANN
Sbjct: 215 SDHIADPVANN 225
>sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp.
GN=CAB37 PE=3 SV=1
Length = 265
Score = 198 bits (503), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 104/191 (54%), Positives = 131/191 (68%), Gaps = 6/191 (3%)
Query: 70 EIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGA 129
+ P YLTGE PGDYG+D GLS P+ F++ + E+IH RWAMLGA G + PE +K G
Sbjct: 64 QTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGV 123
Query: 130 NCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAV-IAEIVLVGGAEYYRITNGLDL 186
G EAVWFK G+ + L+Y G I + A+ A++VL+G E YR+ G
Sbjct: 124 TFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGGGPLG 182
Query: 187 E--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENL 244
E DK++PGG FDPLGLA DP+ FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENL
Sbjct: 183 EGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENL 242
Query: 245 AKHLSDPFANN 255
H++DP ANN
Sbjct: 243 YDHVADPVANN 253
>sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp.
GN=CAB91R PE=3 SV=1
Length = 267
Score = 198 bits (503), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 110/225 (48%), Positives = 142/225 (63%), Gaps = 11/225 (4%)
Query: 39 SPSPPLTKSSPSGMVSPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFS 98
+ + P++ SP PDR +L E P YLTGE PGDYG+D LS P+ F+
Sbjct: 40 TKAKPVSSGSP--WYGPDRVKYLGP---FSGEAPSYLTGEFPGDYGWDTAELSADPETFA 94
Query: 99 KYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN-- 156
K + E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G
Sbjct: 95 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSL 153
Query: 157 IPINLVFAVIA-EIVLVGGAEYYRITNG--LDLEDKLHPGGPFDPLGLAKDPDQFALLKV 213
+ + A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA DP+ FA LKV
Sbjct: 154 VHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKV 213
Query: 214 KEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 258
KEIKNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN +
Sbjct: 214 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWS 258
>sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana
tabacum GN=CAB7 PE=3 SV=1
Length = 267
Score = 198 bits (503), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 121/262 (46%), Positives = 153/262 (58%), Gaps = 30/262 (11%)
Query: 14 QTLLLSSPLLSSPRRKPPLLPSLSPSPS-----------PPLTKSSP----SGMVSPDRR 58
T+ LSSP + K LSPS S +TK+ P S PDR
Sbjct: 4 STMALSSPSFAGNAVK------LSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRV 57
Query: 59 IFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGF 118
+L E P YLTGE PGDYG+D GLS P+ F+K + E+IH RWAMLGA G
Sbjct: 58 KYLGP---FSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGC 114
Query: 119 IIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGA 175
+ PE + G G EAVWFK G+ + L+Y G + + A+ A ++VL+G
Sbjct: 115 VFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAI 173
Query: 176 EYYRITNG--LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQA 233
E YR+ G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMF+M GFF+QA
Sbjct: 174 EGYRVAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 233
Query: 234 YVTGEGPVENLAKHLSDPFANN 255
VTG+GP++NL HL+DP NN
Sbjct: 234 IVTGKGPLDNLVDHLADPVNNN 255
>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum
lycopersicum GN=CAB4 PE=2 SV=1
Length = 265
Score = 198 bits (503), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 103/191 (53%), Positives = 132/191 (69%), Gaps = 6/191 (3%)
Query: 70 EIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGA 129
+ P YLTGE PGDYG+D GLS P+ F++ + E+IH RWAMLGA G + PE +K G
Sbjct: 64 QTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGV 123
Query: 130 NCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGLDL 186
G EAVWFK G+ + L+Y G + + A+ A ++VL+G E YR+ G
Sbjct: 124 KFG-EAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLG 182
Query: 187 E--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENL 244
E DK++PGG FDPLGLA DP+ FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENL
Sbjct: 183 EGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENL 242
Query: 245 AKHLSDPFANN 255
+ H++DP ANN
Sbjct: 243 SDHINDPVANN 253
>sp|Q8VZ87|CB1B_ARATH Chlorophyll a-b binding protein 3, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.2 PE=1 SV=2
Length = 267
Score = 197 bits (502), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 103/192 (53%), Positives = 132/192 (68%), Gaps = 7/192 (3%)
Query: 70 EIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGA 129
E P YLTGE PGDYG+D GLS P+ F++ + E+IH+RWAMLGA G + PE + G
Sbjct: 65 ESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGV 124
Query: 130 NCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRIT-NG-- 183
G EAVWFK G+ + L+Y G + + A+ A +++L+G E YR+ NG
Sbjct: 125 KFG-EAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPL 183
Query: 184 LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVEN 243
+ ED L+PGG FDPLGLA DP+ FA LKVKE+KNGRLAMF+M GFF+QA VTG+GP+EN
Sbjct: 184 GEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIEN 243
Query: 244 LAKHLSDPFANN 255
LA HL+DP NN
Sbjct: 244 LADHLADPVNNN 255
>sp|P0CJ48|CB1A_ARATH Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.1 PE=1 SV=1
Length = 267
Score = 197 bits (502), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 103/192 (53%), Positives = 132/192 (68%), Gaps = 7/192 (3%)
Query: 70 EIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGA 129
E P YLTGE PGDYG+D GLS P+ F++ + E+IH+RWAMLGA G + PE + G
Sbjct: 65 ESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGV 124
Query: 130 NCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRIT-NG-- 183
G EAVWFK G+ + L+Y G + + A+ A +++L+G E YR+ NG
Sbjct: 125 KFG-EAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPL 183
Query: 184 LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVEN 243
+ ED L+PGG FDPLGLA DP+ FA LKVKE+KNGRLAMF+M GFF+QA VTG+GP+EN
Sbjct: 184 GEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIEN 243
Query: 244 LAKHLSDPFANN 255
LA HL+DP NN
Sbjct: 244 LADHLADPVNNN 255
>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member F3, chloroplastic
OS=Polystichum munitum GN=CABF3 PE=3 SV=1
Length = 265
Score = 197 bits (502), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 100/189 (52%), Positives = 131/189 (69%), Gaps = 6/189 (3%)
Query: 72 PEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANC 131
P YL+GE PGDYG+D GLS P+ F+K + E+IH+RWAMLGA G + PE K G
Sbjct: 66 PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKF 125
Query: 132 GPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNG--LDL 186
G EAVWFK G+ + L+Y G + + A+ A +++L+G E YR+ G ++
Sbjct: 126 G-EAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV 184
Query: 187 EDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAK 246
ED ++PGG FDPLGLA DP+ FA LKVKE+KNGRLAMF+M GFF+QA VTG+GP+ENL+
Sbjct: 185 EDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSD 244
Query: 247 HLSDPFANN 255
HL+DP NN
Sbjct: 245 HLADPAVNN 253
>sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana
tabacum GN=CAB36 PE=3 SV=1
Length = 265
Score = 197 bits (502), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 105/191 (54%), Positives = 131/191 (68%), Gaps = 6/191 (3%)
Query: 70 EIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGA 129
+ P YLTGE PGDYG+D GLS P+ F++ + E+IH RWAMLGA G + PE +K G
Sbjct: 64 QTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGV 123
Query: 130 NCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGLDL 186
G EAVWFK G+ + L+Y G I + AV A ++VL+G E YR+ G
Sbjct: 124 KFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRVGGGPLG 182
Query: 187 E--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENL 244
E DK++PGG FDPLGLA DP+ FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENL
Sbjct: 183 EGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENL 242
Query: 245 AKHLSDPFANN 255
H++DP ANN
Sbjct: 243 FDHVADPVANN 253
>sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare
GN=CAB2 PE=3 SV=1
Length = 264
Score = 197 bits (501), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 110/216 (50%), Positives = 136/216 (62%), Gaps = 9/216 (4%)
Query: 45 TKSSPSGMVSPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYE 104
TK S PDR +L E P YLTGE PGDYG+D GLS P+ F+K + E
Sbjct: 41 TKKVGSPWYGPDRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE 97
Query: 105 LIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLV 162
+IH RWAMLGA G + PE + G G EAVWFK G+ + L Y G + +
Sbjct: 98 VIHGRWAMLGALGCVFPELLARNGVKFG-EAVWFKKGSQIFSEGGLQYLGNPSLVHAQSI 156
Query: 163 FAVIA-EIVLVGGAEYYRITNG--LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 219
A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA D + FA LKVKEIKNG
Sbjct: 157 LAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDAEAFAELKVKEIKNG 216
Query: 220 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 255
RLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 217 RLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
>sp|P04780|CB22_PETSP Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp.
GN=CAB22L PE=3 SV=1
Length = 267
Score = 196 bits (499), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 109/227 (48%), Positives = 142/227 (62%), Gaps = 11/227 (4%)
Query: 37 SPSPSPPLTKSSPSGMVSPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDD 96
+ + + P++ SP PDR +L E P YLTGE PGDYG+D GLS P+
Sbjct: 38 TATKAKPVSSGSP--WYGPDRVKYLGP---FSGEAPSYLTGEFPGDYGWDTAGLSADPET 92
Query: 97 FSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN 156
F+K + E+IH RWAMLGA G + PE F + G G EAVW K G+ + L+Y G
Sbjct: 93 FAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFG-EAVWLKAGSQIFSEGGLDYLGNP 151
Query: 157 --IPINLVFAVIA-EIVLVGGAEYYRITNG--LDLEDKLHPGGPFDPLGLAKDPDQFALL 211
+ + A+ A +++L+G E YR+ G + D L+PGG FDPLGLA+DP+ FA L
Sbjct: 152 SLVHAQSILAIWACQVLLMGAVEGYRVAGGPLGVVVDPLYPGGSFDPLGLAEDPEAFAEL 211
Query: 212 KVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 258
KVKE KNGRLAMF+M GFF+QA VTG+GP+ENLA HL DP NN +
Sbjct: 212 KVKETKNGRLAMFSMFGFFIQAIVTGKGPLENLADHLVDPVNNNAWS 258
>sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max
GN=CAB3 PE=3 SV=1
Length = 263
Score = 196 bits (499), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 109/214 (50%), Positives = 139/214 (64%), Gaps = 9/214 (4%)
Query: 47 SSPSGMVSPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELI 106
SS S PDR +L E P YLTGE PGDYG+D GLS P+ F+K + E+I
Sbjct: 42 SSGSPWYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 98
Query: 107 HARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFA 164
H+RWAMLGA G + PE ++ G G EAVWFK G+ + L+Y G I + A
Sbjct: 99 HSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILA 157
Query: 165 VIA-EIVLVGGAEYYRITNG--LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRL 221
+ A +++L+G E YRI G ++ D ++PGG FDPLGLA DP+ FA LKVKE+KNGRL
Sbjct: 158 IWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRL 217
Query: 222 AMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 255
AMF+M GFF+QA VTG+GP+ENLA HL+ P NN
Sbjct: 218 AMFSMFGFFVQAIVTGKGPLENLADHLAGPVNNN 251
>sp|P12471|CB21_SOYBN Chlorophyll a-b binding protein, chloroplastic (Fragment)
OS=Glycine max PE=2 SV=1
Length = 245
Score = 196 bits (499), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 109/216 (50%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 45 TKSSPSGMVSPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYE 104
T SS S PDR +L E P YLTGE PGDYG+D GLS P+ F+K + E
Sbjct: 22 TVSSGSPWYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE 78
Query: 105 LIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLV 162
+IH+RWAMLGA G + PE + G G EA WFK G+ + L+Y G I +
Sbjct: 79 VIHSRWAMLGALGCVFPELLARNGVKFG-EASWFKAGSQIFSEGGLDYLGNQSLIHAQSI 137
Query: 163 FAVIA-EIVLVGGAEYYRITNG--LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 219
A+ A +++L+G E YRI G ++ D ++PGG FDPL LA DP+ FA LKVKEIKNG
Sbjct: 138 LAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLALADDPEAFAELKVKEIKNG 197
Query: 220 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 255
RLAMF+M GFF+QA VTG+GP+ENLA HL++P NN
Sbjct: 198 RLAMFSMFGFFVQAIVTGKGPLENLADHLAEPVNNN 233
>sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens
GN=LHC0 PE=1 SV=1
Length = 264
Score = 195 bits (496), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 116/253 (45%), Positives = 154/253 (60%), Gaps = 15/253 (5%)
Query: 14 QTLLLSSPLLSSPRRK-PPLLPSLSPSPSPPLTKS-----SPSGMVSPDRRIFLPEGLLD 67
T+ LSSP L+ K P L + + K+ S S PDR +L
Sbjct: 4 STMALSSPALAGKAVKVAPSSSELFGNGRVSMRKTVKAPVSDSPWYGPDRVKYLGP---F 60
Query: 68 RSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKF 127
E P YLTGE PGDYG+D GLS P+ F+K + E+IH+RWAMLGA G + PE +
Sbjct: 61 SGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARN 120
Query: 128 GANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNG- 183
G G EAVWFK G+ + L+Y G + + ++ A +++L+G E YR+ G
Sbjct: 121 GVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILSIWATQVILMGAVEGYRVAGGP 179
Query: 184 -LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVE 242
++ D L+PGG FDPLGLA+DP++ A LKVKE+KNGRLAMF+M GFF+QA VTG+GP+E
Sbjct: 180 LGEIVDPLYPGGSFDPLGLAEDPERSAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 239
Query: 243 NLAKHLSDPFANN 255
NLA HL+DP NN
Sbjct: 240 NLADHLADPVNNN 252
>sp|P22686|CB2_CHLMO Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Chlamydomonas moewusii PE=2 SV=1
Length = 256
Score = 195 bits (496), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 108/221 (48%), Positives = 135/221 (61%), Gaps = 8/221 (3%)
Query: 46 KSSPSGMVSPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYEL 105
KS+ PDR +L + P YLTGE PGDYG+D GLS P+ F KY+ E+
Sbjct: 33 KSAGIEWYGPDRAKWLGP---FSTNTPAYLTGEFPGDYGWDTAGLSADPETFKKYRELEV 89
Query: 106 IHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI---NLV 162
IHARWA+LGA G + PE + + E VWFK GA + L+Y G I N+V
Sbjct: 90 IHARWALLGALGILTPELLSTYAGVKFGEPVWFKAGAQIFSEGGLDYLGSPALIHAQNIV 149
Query: 163 FAVIAEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGR 220
+ ++VL+G E YR+ G E D L+PG FDPLGLA DPD FA LKVKEIKNGR
Sbjct: 150 ATLAVQVVLMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGR 209
Query: 221 LAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 261
LAMF+ GFF+QA VTG+GP++NLA HL+DP NN +
Sbjct: 210 LAMFSCFGFFVQAIVTGKGPIQNLADHLADPGTNNAFAAAT 250
>sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba
GN=CAB1 PE=3 SV=1
Length = 266
Score = 195 bits (496), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 103/192 (53%), Positives = 129/192 (67%), Gaps = 7/192 (3%)
Query: 70 EIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGA 129
E P YLTGE PGDYG+D GLS P+ F++ + E+IH RWAMLGA G + PE + G
Sbjct: 64 EPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGV 123
Query: 130 NCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGLDL 186
G EAVWFK G+ + L+Y G + + A+ A +++L+G E YR+ L
Sbjct: 124 KFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGEGPL 182
Query: 187 ---EDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVEN 243
ED L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP+EN
Sbjct: 183 GEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 242
Query: 244 LAKHLSDPFANN 255
LA HL+DP NN
Sbjct: 243 LADHLADPVNNN 254
>sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum
GN=CAB215 PE=1 SV=1
Length = 265
Score = 195 bits (495), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 114/218 (52%), Positives = 142/218 (65%), Gaps = 12/218 (5%)
Query: 45 TKSSPSGM-VSPDRRIFLPEGLLDRSE-IPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQA 102
KS+P + PDR P+ L SE IP YLTGE PGDYG+D GLS P+ F++ +
Sbjct: 41 VKSAPESIWYGPDR----PKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRE 96
Query: 103 YELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPIN 160
E+IH+RWAMLGA G PE K G G EAVWFK G+ + L+Y G I
Sbjct: 97 LEVIHSRWAMLGALGCTFPELLEKNGVKFG-EAVWFKAGSQIFAEGGLDYLGNPNLIHAQ 155
Query: 161 LVFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIK 217
+ A+ A ++VL+G E YR+ G E D L+PGG FDPLGLA DPD FA LKVKE+K
Sbjct: 156 SILAIWATQVVLMGFVEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPDSFAELKVKELK 215
Query: 218 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 255
NGRLAMF+M GFF+QA VTG+GP++NL H++DP ANN
Sbjct: 216 NGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANN 253
>sp|P14273|CB2_CHLRE Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1
Length = 253
Score = 194 bits (494), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 110/214 (51%), Positives = 133/214 (62%), Gaps = 8/214 (3%)
Query: 47 SSPSGMVSPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELI 106
SS P+R +L G + P YLTGE PGDYG+D GLS P+ F +Y+ ELI
Sbjct: 31 SSGVEFYGPNRAKWL--GPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELI 88
Query: 107 HARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI---NLVF 163
HARWAMLGA G PE K G G EAVWFK GA + L+Y G + N+V
Sbjct: 89 HARWAMLGALGCQTPELLAKSGTKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIVA 147
Query: 164 AVIAEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRL 221
+++L+G E YR+ G E D L+PG FDPLGLA DPD FA LKVKEIKNGRL
Sbjct: 148 TSAVQVILMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRL 207
Query: 222 AMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 255
A F+M GFF+QA VTG+GPV+NL HL++P NN
Sbjct: 208 ASFSMFGFFVQAIVTGKGPVQNLDDHLANPTVNN 241
>sp|P08222|CB22_CUCSA Chlorophyll a-b binding protein of LHCII type 1 (Fragment)
OS=Cucumis sativus PE=2 SV=1
Length = 206
Score = 194 bits (492), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 102/191 (53%), Positives = 131/191 (68%), Gaps = 6/191 (3%)
Query: 70 EIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGA 129
E P YLTGE PGDYG+D GLS P+ F+K + E+IH+ WAMLGA G + PE ++ G
Sbjct: 5 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLSRNGV 64
Query: 130 NCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNG--L 184
G EAVWFK G+ + L+Y G + + A+ A ++VL+G E YRI G
Sbjct: 65 KFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLG 123
Query: 185 DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENL 244
++ D ++PGG FDPLGLA DP+ FA LKVKE+KNGRLAMF+M GFF+QA VTG+GP+ENL
Sbjct: 124 EVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENL 183
Query: 245 AKHLSDPFANN 255
A HL+DP NN
Sbjct: 184 ADHLADPVNNN 194
>sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2
SV=1
Length = 265
Score = 193 bits (490), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 107/206 (51%), Positives = 135/206 (65%), Gaps = 9/206 (4%)
Query: 55 PDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLG 114
PDR ++L G L E P YLTGE PGDYG+D GLS P+ F+K + E+IH RWAMLG
Sbjct: 52 PDRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 108
Query: 115 AAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVL 171
A G + PE + G G EAVWFK G+ + L+Y G I + A+ A ++VL
Sbjct: 109 ALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVL 167
Query: 172 VGGAEYYRITNG--LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGF 229
+G E YRI G ++ D L+PGG FDPLGLA DP+ F LKVKE+K GRLAM +M GF
Sbjct: 168 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFGELKVKELKKGRLAMLSMFGF 227
Query: 230 FLQAYVTGEGPVENLAKHLSDPFANN 255
F+QA VTG+GP+ENLA H++DP NN
Sbjct: 228 FVQAIVTGKGPLENLADHIADPVNNN 253
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.140 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 118,294,231
Number of Sequences: 539616
Number of extensions: 5818014
Number of successful extensions: 20614
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 19975
Number of HSP's gapped (non-prelim): 346
length of query: 270
length of database: 191,569,459
effective HSP length: 116
effective length of query: 154
effective length of database: 128,974,003
effective search space: 19861996462
effective search space used: 19861996462
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)