BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024237
(270 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q38799|ODPB1_ARATH Pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial
OS=Arabidopsis thaliana GN=PDH2 PE=1 SV=2
Length = 363
Score = 459 bits (1182), Expect = e-129, Method: Compositional matrix adjust.
Identities = 223/269 (82%), Positives = 245/269 (91%), Gaps = 1/269 (0%)
Query: 1 MWGIIRQKVAAGGGSPVARIRPVVSNLRNYSSAVKQMMVREALNSALDEEMSADPKVFLM 60
M GI+RQ+ A G S + R R + + R+Y++ K+M VR+ALNSA+DEEMSADPKVF+M
Sbjct: 1 MLGILRQR-AIDGASTLRRTRFALVSARSYAAGAKEMTVRDALNSAIDEEMSADPKVFVM 59
Query: 61 GEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFS 120
GEEVG+YQGAYKI+KGLLEKYGPERV DTPITEAGFTGIGVGAAY GLKPVVEFMTFNFS
Sbjct: 60 GEEVGQYQGAYKITKGLLEKYGPERVYDTPITEAGFTGIGVGAAYAGLKPVVEFMTFNFS 119
Query: 121 MQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSHCYAAWYASVPGLKVLS 180
MQAIDHIINSAAKSNYMS+GQI+VPIVFRGPNGAAAGVGAQHS CYAAWYASVPGLKVL+
Sbjct: 120 MQAIDHIINSAAKSNYMSAGQINVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLA 179
Query: 181 PYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKD 240
PYS+EDARGLLKAAIRDPDPVVFLENELLYGESFP+S E LDSSFCLPIGKAKIEREGKD
Sbjct: 180 PYSAEDARGLLKAAIRDPDPVVFLENELLYGESFPISEEALDSSFCLPIGKAKIEREGKD 239
Query: 241 VTITAFSKIVGLSLKAAEILAKEGISAEV 269
VTI FSK+VG +LKAAE LA+EGISAEV
Sbjct: 240 VTIVTFSKMVGFALKAAEKLAEEGISAEV 268
>sp|Q6Z1G7|ODPB1_ORYSJ Pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial
OS=Oryza sativa subsp. japonica GN=Os08g0536000 PE=2
SV=1
Length = 374
Score = 449 bits (1154), Expect = e-125, Method: Compositional matrix adjust.
Identities = 216/235 (91%), Positives = 229/235 (97%)
Query: 35 KQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEA 94
K+M VREALNSALDEEMSADP VFLMGEEVGEYQGAYKISKGLL+KYGP+RVLDTPITEA
Sbjct: 39 KEMTVREALNSALDEEMSADPSVFLMGEEVGEYQGAYKISKGLLDKYGPDRVLDTPITEA 98
Query: 95 GFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGA 154
GFTGIGVGAAY GL+PVVEFMTFNFSMQAIDHIINSAAKSNYMS+GQI+VPIVFRGPNGA
Sbjct: 99 GFTGIGVGAAYQGLRPVVEFMTFNFSMQAIDHIINSAAKSNYMSAGQINVPIVFRGPNGA 158
Query: 155 AAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESF 214
AAGVGAQHS CYAAWYA VPGLKVL+PYS+EDARGLLKAAIRDPDPVVFLENELLYGESF
Sbjct: 159 AAGVGAQHSQCYAAWYAHVPGLKVLTPYSAEDARGLLKAAIRDPDPVVFLENELLYGESF 218
Query: 215 PVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEV 269
PVSAEVLDSSFCLPIGKAKIE+EGKDVTITAFSK+VG +L+AAEIL+KEGISAEV
Sbjct: 219 PVSAEVLDSSFCLPIGKAKIEQEGKDVTITAFSKMVGYALQAAEILSKEGISAEV 273
>sp|Q0J0H4|ODPB2_ORYSJ Pyruvate dehydrogenase E1 component subunit beta-2, mitochondrial
OS=Oryza sativa subsp. japonica GN=Os09g0509200 PE=2
SV=1
Length = 376
Score = 444 bits (1142), Expect = e-124, Method: Compositional matrix adjust.
Identities = 223/275 (81%), Positives = 244/275 (88%), Gaps = 6/275 (2%)
Query: 1 MWGIIRQKVAAGG--GSPVARIRPVVSNLRNYSSAV----KQMMVREALNSALDEEMSAD 54
M G R+++ +G G + R+RP + + + A K+M VREALNSALDEEMSAD
Sbjct: 1 MLGAARRQLGSGPMLGQVLRRLRPATAAAADAARAYSAAAKEMTVREALNSALDEEMSAD 60
Query: 55 PKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEF 114
P VFLMGEEVGEYQGAYKISKGLL+KYGPERVLDTPITEAGFTGI VGAAY GL+PVVEF
Sbjct: 61 PSVFLMGEEVGEYQGAYKISKGLLDKYGPERVLDTPITEAGFTGIAVGAAYQGLRPVVEF 120
Query: 115 MTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSHCYAAWYASVP 174
MTFNFSMQAIDHIINSAAKSNYMS+GQISVPIVFRGPNGAAAGVGAQHS CYAAWYA VP
Sbjct: 121 MTFNFSMQAIDHIINSAAKSNYMSAGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYAHVP 180
Query: 175 GLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKI 234
GLKVL PYS+EDARGLLKAAIRDPDPVVFLENELLYGESFP+SAEVLDSSF LPIGKAKI
Sbjct: 181 GLKVLVPYSAEDARGLLKAAIRDPDPVVFLENELLYGESFPISAEVLDSSFALPIGKAKI 240
Query: 235 EREGKDVTITAFSKIVGLSLKAAEILAKEGISAEV 269
EREGKDVTITA+SK+VG +L+AA+IL+KEGISAEV
Sbjct: 241 EREGKDVTITAYSKMVGYALQAADILSKEGISAEV 275
>sp|P52904|ODPB_PEA Pyruvate dehydrogenase E1 component subunit beta, mitochondrial
OS=Pisum sativum PE=2 SV=1
Length = 359
Score = 440 bits (1132), Expect = e-123, Method: Compositional matrix adjust.
Identities = 226/269 (84%), Positives = 237/269 (88%), Gaps = 11/269 (4%)
Query: 1 MWGIIRQKVAAGGGSPVARIRPVVSNLRNYSSAVKQMMVREALNSALDEEMSADPKVFLM 60
M G+IR K IRP S R S+ KQM VR+ALNSALD EMSAD KVFLM
Sbjct: 1 MLGVIRNKT----------IRPSFSAFRF-FSSAKQMTVRDALNSALDVEMSADSKVFLM 49
Query: 61 GEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFS 120
GEEVGEYQGAYK++KGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFS
Sbjct: 50 GEEVGEYQGAYKVTKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFS 109
Query: 121 MQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSHCYAAWYASVPGLKVLS 180
MQAIDHIINSAAKSNYMS+GQISVPIVFRG NG AAGVGAQHSHCYA+WY S PGLKVL
Sbjct: 110 MQAIDHIINSAAKSNYMSAGQISVPIVFRGLNGDAAGVGAQHSHCYASWYGSCPGLKVLV 169
Query: 181 PYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKD 240
P+S+EDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSF LPIGKAKIEREGKD
Sbjct: 170 PHSAEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFWLPIGKAKIEREGKD 229
Query: 241 VTITAFSKIVGLSLKAAEILAKEGISAEV 269
VTITAFSK+VG +LKAAEIL KEGISAEV
Sbjct: 230 VTITAFSKMVGFALKAAEILEKEGISAEV 258
>sp|Q86HX0|ODPB_DICDI Pyruvate dehydrogenase E1 component subunit beta, mitochondrial
OS=Dictyostelium discoideum GN=pdhB PE=1 SV=1
Length = 356
Score = 342 bits (878), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 163/258 (63%), Positives = 209/258 (81%), Gaps = 3/258 (1%)
Query: 15 SPVARIRP-VVSNLR--NYSSAVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAY 71
S + +I+P ++ N R + A K++ VR+A+NSALDEE++ D KVF+MGEEV +Y GAY
Sbjct: 4 SILKKIQPSLLVNFRIITRTYATKEVTVRDAINSALDEELARDEKVFIMGEEVAQYNGAY 63
Query: 72 KISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSA 131
KI+KGL +KYG +R++DTPITEAGF GIGVGAA G +P++EFMTFNF+MQAIDHIINS+
Sbjct: 64 KITKGLFDKYGGDRIIDTPITEAGFAGIGVGAAMAGTRPIIEFMTFNFAMQAIDHIINSS 123
Query: 132 AKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLL 191
AK++YMS G++ PIV+RGPNG VGAQHS C+AAWY SVPGLKV++P+S+ D RGLL
Sbjct: 124 AKTHYMSGGKVFNPIVWRGPNGPPTAVGAQHSQCFAAWYGSVPGLKVVAPWSAADHRGLL 183
Query: 192 KAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVG 251
K+AIRD +PVV+LE+ELLY F +S + D + +PIGKAK+EREGKDVTI FS+IV
Sbjct: 184 KSAIRDDNPVVYLESELLYNYKFDLSDQEQDKEYLVPIGKAKVEREGKDVTIVGFSRIVS 243
Query: 252 LSLKAAEILAKEGISAEV 269
++AAEILAKEGISAEV
Sbjct: 244 NCMEAAEILAKEGISAEV 261
>sp|P32473|ODPB_YEAST Pyruvate dehydrogenase E1 component subunit beta, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PDB1 PE=1 SV=2
Length = 366
Score = 337 bits (865), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 165/256 (64%), Positives = 201/256 (78%), Gaps = 2/256 (0%)
Query: 15 SPVARIRPVVSNLRNYSSAVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKIS 74
+P + +RP + S+ K M VREALNSA+ EE+ D VFL+GEEV +Y GAYK+S
Sbjct: 17 APTSFVRPSAAAAALRFSSTKTMTVREALNSAMAEELDRDDDVFLIGEEVAQYNGAYKVS 76
Query: 75 KGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKS 134
KGLL+++G RV+DTPITE GFTG+ VGAA GLKP+VEFM+FNFSMQAIDH++NSAAK+
Sbjct: 77 KGLLDRFGERRVVDTPITEYGFTGLAVGAALKGLKPIVEFMSFNFSMQAIDHVVNSAAKT 136
Query: 135 NYMSSGQISVPIVFRGPNGAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAA 194
+YMS G +VFRGPNGAA GVGAQHS ++ WY S+PGLKVL PYS+EDARGLLKAA
Sbjct: 137 HYMSGGTQKCQMVFRGPNGAAVGVGAQHSQDFSPWYGSIPGLKVLVPYSAEDARGLLKAA 196
Query: 195 IRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSL 254
IRDP+PVVFLENELLYGESF +S E L F LP KAKIEREG D++I +++ V SL
Sbjct: 197 IRDPNPVVFLENELLYGESFEISEEALSPEFTLPY-KAKIEREGTDISIVTYTRNVQFSL 255
Query: 255 KAAEILAKE-GISAEV 269
+AAEIL K+ G+SAEV
Sbjct: 256 EAAEILQKKYGVSAEV 271
>sp|O44451|ODPB_CAEEL Pyruvate dehydrogenase E1 component subunit beta, mitochondrial
OS=Caenorhabditis elegans GN=C04C3.3 PE=1 SV=2
Length = 352
Score = 337 bits (863), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 162/239 (67%), Positives = 194/239 (81%)
Query: 31 SSAVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTP 90
+ A M VR+ALN A+DEE+ D +VFLMGEEV +Y GAYKISKGL +K+G +RV+DTP
Sbjct: 19 TRAASTMTVRDALNQAMDEEIKRDDRVFLMGEEVAQYDGAYKISKGLWKKHGDKRVVDTP 78
Query: 91 ITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRG 150
ITE GF GI VGAA+ GL+P+ EFMTFNFSMQAID IINSAAK+ YMS+G++ VPIVFRG
Sbjct: 79 ITEMGFAGIAVGAAFAGLRPICEFMTFNFSMQAIDQIINSAAKTYYMSAGRVPVPIVFRG 138
Query: 151 PNGAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLY 210
PNGAAAGV AQHS ++AWYA PGLKV+ PYS+EDA+GLLKAAIRD +PVVFLENE+LY
Sbjct: 139 PNGAAAGVAAQHSQDFSAWYAHCPGLKVVCPYSAEDAKGLLKAAIRDDNPVVFLENEILY 198
Query: 211 GESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEV 269
G+SFPV EVL F +PIGKAKIER G VTI ++S+ V SL+AA+ L G+SAEV
Sbjct: 199 GQSFPVGDEVLSDDFVVPIGKAKIERAGDHVTIVSYSRGVEFSLEAAKQLEAIGVSAEV 257
>sp|Q09171|ODPB_SCHPO Pyruvate dehydrogenase E1 component subunit beta, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pdb1 PE=4 SV=1
Length = 366
Score = 331 bits (848), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 160/246 (65%), Positives = 197/246 (80%), Gaps = 4/246 (1%)
Query: 28 RNYSSA---VKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPE 84
+ YSS+ VK+M VR+ALNSA++EEM D +VFL+GEEV +Y GAYKIS+GLL+K+GP+
Sbjct: 26 KRYSSSSNGVKEMTVRDALNSAMEEEMKRDDRVFLIGEEVAQYNGAYKISRGLLDKFGPK 85
Query: 85 RVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISV 144
RV+DTPITE GFTG+ GAA+ GL+P+ EFMTFNFSMQAIDHI+NSAA++ YMS G +
Sbjct: 86 RVIDTPITEMGFTGLATGAAFAGLRPICEFMTFNFSMQAIDHIVNSAARTLYMSGGIQAC 145
Query: 145 PIVFRGPNGAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL 204
PIVFRGPNG AA V AQHS +A WY S+PGLKV+SPYS+EDARGLLKAAIRDP+PVV L
Sbjct: 146 PIVFRGPNGPAAAVAAQHSQHFAPWYGSIPGLKVVSPYSAEDARGLLKAAIRDPNPVVVL 205
Query: 205 ENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEIL-AKE 263
ENE+LYG++FP+S E L F LP G AK+ER GKD+TI S V +L+AA+ L A
Sbjct: 206 ENEILYGKTFPISKEALSEDFVLPFGLAKVERPGKDITIVGESISVVTALEAADKLKADY 265
Query: 264 GISAEV 269
G+ AEV
Sbjct: 266 GVEAEV 271
>sp|P11966|ODPB_BOVIN Pyruvate dehydrogenase E1 component subunit beta, mitochondrial
OS=Bos taurus GN=PDHB PE=1 SV=2
Length = 359
Score = 322 bits (826), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 153/237 (64%), Positives = 187/237 (78%)
Query: 33 AVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPIT 92
A Q+ VREA+N +DEE+ D KVFL+GEEV +Y GAYK+S+GL +KYG +R++DTPI+
Sbjct: 29 AALQVTVREAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPIS 88
Query: 93 EAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPN 152
E GF GI VGAA GL+P+ EFMTFNFSMQAID +INSAAK+ YMS G SVPIVFRGPN
Sbjct: 89 EMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSGGLQSVPIVFRGPN 148
Query: 153 GAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGE 212
GA+AGV AQHS C+AAWY PGLKV+SP+SSEDA+GL+K+AIRD +PVV LENEL+YG
Sbjct: 149 GASAGVAAQHSQCFAAWYGHCPGLKVVSPWSSEDAKGLIKSAIRDNNPVVVLENELMYGV 208
Query: 213 SFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEV 269
F + +E F +PIGKAKIER+G VTI A S+ VG L+AA +L+KEGI EV
Sbjct: 209 PFELPSEAQSKDFLIPIGKAKIERQGTHVTIVAHSRPVGHCLEAATVLSKEGIECEV 265
>sp|Q9D051|ODPB_MOUSE Pyruvate dehydrogenase E1 component subunit beta, mitochondrial
OS=Mus musculus GN=Pdhb PE=1 SV=1
Length = 359
Score = 322 bits (824), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 150/237 (63%), Positives = 188/237 (79%)
Query: 33 AVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPIT 92
A Q+ VREA+N +DEE+ D KVFL+GEEV +Y GAYK+S+GL +KYG +R++DTPI+
Sbjct: 29 AAVQLTVREAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPIS 88
Query: 93 EAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPN 152
E GF GI VGAA GL+P+ EFMTFNFSMQAID +INSAAK+ YMS+G VPIVFRGPN
Sbjct: 89 EMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSAGLQPVPIVFRGPN 148
Query: 153 GAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGE 212
GA+AGV AQHS C+AAWY PGLKV+SP++SEDA+GL+K+AIRD +PVV LENEL+YG
Sbjct: 149 GASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDNNPVVMLENELMYGV 208
Query: 213 SFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEV 269
+F + AE F +PIGKAKIER+G +T+ A S+ VG L+AA +L+KEGI EV
Sbjct: 209 AFELPAEAQSKDFLIPIGKAKIERQGTHITVVAHSRPVGHCLEAAAVLSKEGIECEV 265
>sp|P49432|ODPB_RAT Pyruvate dehydrogenase E1 component subunit beta, mitochondrial
OS=Rattus norvegicus GN=Pdhb PE=1 SV=2
Length = 359
Score = 320 bits (821), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 149/237 (62%), Positives = 187/237 (78%)
Query: 33 AVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPIT 92
A Q+ VREA+N +DEE+ D KVFL+GEEV +Y GAYK+S+GL +KYG +R++DTPI+
Sbjct: 29 AAVQLTVREAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPIS 88
Query: 93 EAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPN 152
E GF GI VGAA GL+P+ EFMTFNFSMQAID +INSAAK+ YMS+G VPIVFRGPN
Sbjct: 89 EMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSAGLQPVPIVFRGPN 148
Query: 153 GAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGE 212
GA+AGV AQHS C+AAWY PGLKV+SP++SEDA+GL+K+AIRD +PVV LENEL+YG
Sbjct: 149 GASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDDNPVVMLENELMYGV 208
Query: 213 SFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEV 269
+F + E F +PIGKAKIER+G +T+ A S+ VG L+AA +L+KEGI EV
Sbjct: 209 AFELPTEAQSKDFLIPIGKAKIERQGTHITVVAHSRPVGHCLEAAAVLSKEGIECEV 265
>sp|O66113|ODPB_ZYMMO Pyruvate dehydrogenase E1 component subunit beta OS=Zymomonas
mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
GN=pdhB PE=3 SV=2
Length = 462
Score = 316 bits (809), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 156/234 (66%), Positives = 187/234 (79%), Gaps = 3/234 (1%)
Query: 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAG 95
Q +REAL A+ EEM D +VF+MGEEV EYQGAYK+++GLL+++G RV+DTPI+E G
Sbjct: 138 QQTLREALRDAMAEEMRRDDRVFVMGEEVAEYQGAYKVTQGLLQEFGARRVVDTPISEYG 197
Query: 96 FTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA 155
F+GIGVGAA GL+PV+EFMT NFSMQAIDHIINSAAK++YMS GQ+ PIVFRGPNGAA
Sbjct: 198 FSGIGVGAAMEGLRPVIEFMTMNFSMQAIDHIINSAAKTHYMSGGQVRCPIVFRGPNGAA 257
Query: 156 AGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFP 215
VGAQH+ + WYA+VPGL VL+PY + DA+GLLKAAIR DPVVFLE ELLYG++F
Sbjct: 258 PRVGAQHTQNFGPWYAAVPGLVVLAPYDAIDAKGLLKAAIRSDDPVVFLECELLYGKTFD 317
Query: 216 VSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEV 269
V +D F LPIGKA+I REGKDVTI ++S V +L AAE LAKEGI AEV
Sbjct: 318 VPK--MD-DFVLPIGKARIIREGKDVTIVSYSIGVSFALTAAEALAKEGIDAEV 368
>sp|Q9R9N4|ODPB_RHIME Pyruvate dehydrogenase E1 component subunit beta OS=Rhizobium
meliloti (strain 1021) GN=pdhB PE=3 SV=2
Length = 460
Score = 314 bits (804), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 150/233 (64%), Positives = 185/233 (79%), Gaps = 3/233 (1%)
Query: 37 MMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGF 96
M VREAL A+ EEM A+ VF+MGEEV EYQGAYK+++GLL+++G RV+DTPITE GF
Sbjct: 138 MTVREALRDAMAEEMRANEDVFVMGEEVAEYQGAYKVTQGLLQEFGARRVVDTPITEHGF 197
Query: 97 TGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAA 156
G+GVGAA GL+P+VEFMTFNF+MQAID IINSAAK+ YMS GQ+ PIVFRGP+GAAA
Sbjct: 198 AGVGVGAAMTGLRPIVEFMTFNFAMQAIDQIINSAAKTLYMSGGQMGAPIVFRGPSGAAA 257
Query: 157 GVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPV 216
V AQHS CYAAWY+ +PGLKV+ PY++ DA+GLLKAAIRDP+PV+FLENE+LYG+SF V
Sbjct: 258 RVAAQHSQCYAAWYSHIPGLKVVMPYTAADAKGLLKAAIRDPNPVIFLENEILYGQSFEV 317
Query: 217 SAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEV 269
LD F LPIGKA+I R GKD T+ +F + ++KAA L +GI E+
Sbjct: 318 PK--LD-DFVLPIGKARIHRTGKDATLVSFGIGMTYAIKAAAELEAQGIDVEI 367
>sp|Q5RE79|ODPB_PONAB Pyruvate dehydrogenase E1 component subunit beta, mitochondrial
OS=Pongo abelii GN=PDHB PE=2 SV=1
Length = 359
Score = 313 bits (802), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 146/237 (61%), Positives = 184/237 (77%)
Query: 33 AVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPIT 92
A Q+ VR+A+N +DEE+ D KVFL+GEEV +Y GAYK+S+GL +KYG +R++DTPI+
Sbjct: 29 AALQVTVRDAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPIS 88
Query: 93 EAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPN 152
E GF GI VGAA GL+P+ EFMTFNFSMQAID +INSAAK+ YMS G VPIVFRGPN
Sbjct: 89 EMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSGGLQPVPIVFRGPN 148
Query: 153 GAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGE 212
GA+AGV AQHS C+AAWY PGLKV+SP++SEDA+GL+K+AIRD +PVV LENEL+YG
Sbjct: 149 GASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDNNPVVVLENELMYGV 208
Query: 213 SFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEV 269
F E F +PIGKAKIER+G +T+ + S+ VG L+AA +L+KEG+ EV
Sbjct: 209 PFEFPPEAQSKDFLIPIGKAKIERQGTHITVVSHSRPVGHCLEAAAVLSKEGVECEV 265
>sp|P11177|ODPB_HUMAN Pyruvate dehydrogenase E1 component subunit beta, mitochondrial
OS=Homo sapiens GN=PDHB PE=1 SV=3
Length = 359
Score = 313 bits (802), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 146/237 (61%), Positives = 184/237 (77%)
Query: 33 AVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPIT 92
A Q+ VR+A+N +DEE+ D KVFL+GEEV +Y GAYK+S+GL +KYG +R++DTPI+
Sbjct: 29 AALQVTVRDAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPIS 88
Query: 93 EAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPN 152
E GF GI VGAA GL+P+ EFMTFNFSMQAID +INSAAK+ YMS G VPIVFRGPN
Sbjct: 89 EMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSGGLQPVPIVFRGPN 148
Query: 153 GAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGE 212
GA+AGV AQHS C+AAWY PGLKV+SP++SEDA+GL+K+AIRD +PVV LENEL+YG
Sbjct: 149 GASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDNNPVVVLENELMYGV 208
Query: 213 SFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEV 269
F E F +PIGKAKIER+G +T+ + S+ VG L+AA +L+KEG+ EV
Sbjct: 209 PFEFPPEAQSKDFLIPIGKAKIERQGTHITVVSHSRPVGHCLEAAAVLSKEGVECEV 265
>sp|Q1RJX3|ODPB_RICBR Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia
bellii (strain RML369-C) GN=pdhB PE=3 SV=1
Length = 325
Score = 307 bits (786), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 146/234 (62%), Positives = 184/234 (78%), Gaps = 4/234 (1%)
Query: 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAG 95
Q+ VREAL A+ EEM D KVF+MGEEV EYQGAYK+++GLLE++GP+RV+DTPITE G
Sbjct: 2 QITVREALRDAMQEEMIRDDKVFVMGEEVAEYQGAYKVTQGLLEQFGPKRVIDTPITEYG 61
Query: 96 FTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA 155
F G+ VGAA+ GL+P+VEFMTFNF+MQA+DHI+NSAAK++YMS GQ+ PIVFRGPNGAA
Sbjct: 62 FAGLAVGAAFAGLRPIVEFMTFNFAMQAMDHIVNSAAKTHYMSGGQVRCPIVFRGPNGAA 121
Query: 156 AGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFP 215
+ V AQHS YAA Y+ +PGLKV++PYS+ED +GL+ AIRD +PV+FLENE+LYG SF
Sbjct: 122 SRVAAQHSQNYAACYSYIPGLKVVAPYSAEDHKGLMITAIRDDNPVIFLENEILYGHSFD 181
Query: 216 VSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEV 269
+S V +P GKAK+ +EG VTI FS V L+L AA IL + I+ EV
Sbjct: 182 ISENVEP----IPFGKAKVLKEGDSVTIVTFSIQVKLALDAANILQSDNINCEV 231
>sp|P26269|ODPB_ASCSU Pyruvate dehydrogenase E1 component subunit beta, mitochondrial
OS=Ascaris suum PE=1 SV=1
Length = 361
Score = 305 bits (780), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 146/245 (59%), Positives = 180/245 (73%)
Query: 25 SNLRNYSSAVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPE 84
++R +S + VR+ALN+ALDEE+ D +VFL+GEEV +Y GAYKISKGL +KYG
Sbjct: 22 QSVRRLASGTLNVTVRDALNAALDEEIKRDDRVFLIGEEVAQYDGAYKISKGLWKKYGDG 81
Query: 85 RVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISV 144
R+ DTPITE G+ VGAA GL+P+ EFM+ NFSMQ IDHIINSAAK++YMS+G+ V
Sbjct: 82 RIWDTPITEMAIAGLSVGAAMNGLRPICEFMSMNFSMQGIDHIINSAAKAHYMSAGRFHV 141
Query: 145 PIVFRGPNGAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL 204
PIVFRG NGAA GV QHS + AW+ PG+KV+ PY EDARGLLKAA+RD +PV+ L
Sbjct: 142 PIVFRGANGAAVGVAQQHSQDFTAWFMHCPGVKVVVPYDCEDARGLLKAAVRDDNPVICL 201
Query: 205 ENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEG 264
ENE+LYG FPVS E F LP G+AKI+R GKD+TI + S V +SL AA+ LAK G
Sbjct: 202 ENEILYGMKFPVSPEAQSPDFVLPFGQAKIQRPGKDITIVSLSIGVDVSLHAADELAKSG 261
Query: 265 ISAEV 269
I EV
Sbjct: 262 IDCEV 266
>sp|Q4UKQ7|ODPB_RICFE Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia
felis (strain ATCC VR-1525 / URRWXCal2) GN=pdhB PE=3
SV=1
Length = 326
Score = 303 bits (775), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 146/234 (62%), Positives = 181/234 (77%), Gaps = 4/234 (1%)
Query: 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAG 95
Q+ VREAL A+ EEM D KVF+MGEEV EYQGAYK+++GLLE++GP+RV+DTPITE G
Sbjct: 2 QITVREALRDAMQEEMIRDDKVFVMGEEVAEYQGAYKVTQGLLEQFGPKRVIDTPITEYG 61
Query: 96 FTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA 155
F G+ VGAA+ GL+P+VEFMTFNF+MQA DHI+NSAAK++YMS GQ PIVFRGPNGAA
Sbjct: 62 FAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQAKCPIVFRGPNGAA 121
Query: 156 AGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFP 215
+ V AQHS Y A Y+ VPGLKV++PYS+ED +GL+ AIRD +PV+FLENE+LYG SF
Sbjct: 122 SRVAAQHSQNYTACYSHVPGLKVVAPYSAEDHKGLMLTAIRDDNPVIFLENEILYGHSFD 181
Query: 216 VSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEV 269
V E ++ +P G+AKI REG VTI FS V L+L AA +L + I EV
Sbjct: 182 VP-ETIEP---IPFGQAKILREGSSVTIVTFSIQVKLALDAANVLQNDNIDCEV 231
>sp|Q92IS2|ODPB_RICCN Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia
conorii (strain ATCC VR-613 / Malish 7) GN=pdhB PE=3
SV=1
Length = 326
Score = 300 bits (769), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 143/234 (61%), Positives = 179/234 (76%), Gaps = 4/234 (1%)
Query: 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAG 95
Q+ VREAL A+ EEM D KVF++GEEV EYQGAYK+++GLLE++GP+RV+DTPITE G
Sbjct: 2 QITVREALRDAMQEEMIRDDKVFVIGEEVAEYQGAYKVTQGLLEQFGPKRVIDTPITEYG 61
Query: 96 FTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA 155
F G+ VGAA+ GL+P+VEFMTFNF+MQA DHI+NSAAK++YMS GQ+ PIVFRGPNGAA
Sbjct: 62 FAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQVKCPIVFRGPNGAA 121
Query: 156 AGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFP 215
+ V AQHS Y A Y+ +PGLKV++PYS+ED +GL+ AIRD +PVVFLENE+LYG SF
Sbjct: 122 SRVAAQHSQNYTACYSHIPGLKVVAPYSAEDHKGLMLTAIRDDNPVVFLENEILYGHSFD 181
Query: 216 VSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEV 269
V + +P G+AKI REG VTI FS V L+L AA + + I EV
Sbjct: 182 VPKTIEP----IPFGQAKILREGSSVTIVTFSIQVKLALDAANFVQNDNIDCEV 231
>sp|Q68XA8|ODPB_RICTY Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia
typhi (strain ATCC VR-144 / Wilmington) GN=pdhB PE=3
SV=1
Length = 326
Score = 295 bits (754), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 140/234 (59%), Positives = 178/234 (76%), Gaps = 4/234 (1%)
Query: 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAG 95
Q+ VREAL A+ EEM D KVF++GEEV EYQGAYK+++GLLE++G +RV+DTPITE G
Sbjct: 2 QITVREALRDAMQEEMLRDDKVFVIGEEVAEYQGAYKVTQGLLEQFGSKRVIDTPITEYG 61
Query: 96 FTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA 155
F G+ VGAA+ GL+P+VEFMTFNF+MQA DHI+NSAAK++YMS GQ+ PIVFRGPNGAA
Sbjct: 62 FAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQVKCPIVFRGPNGAA 121
Query: 156 AGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFP 215
+ V AQHS Y A Y+ +PGLKV++PYS+ED +GL+ AIRD +PV+FLENE+LYG SF
Sbjct: 122 SRVAAQHSQNYTACYSHIPGLKVVAPYSAEDHKGLMLTAIRDDNPVIFLENEILYGHSF- 180
Query: 216 VSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEV 269
+V D +P KAKI +EG +VTI FS V L+L IL + I E+
Sbjct: 181 ---DVPDIIEPIPFSKAKILKEGSNVTIVTFSIQVKLALDVVNILQNDNIDCEL 231
>sp|Q9ZDR3|ODPB_RICPR Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia
prowazekii (strain Madrid E) GN=pdhB PE=3 SV=1
Length = 326
Score = 294 bits (752), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 140/234 (59%), Positives = 178/234 (76%), Gaps = 4/234 (1%)
Query: 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAG 95
Q+ VREAL A+ EEM D KVF++GEEV EYQGAYK+++GLLE++G +RV+DTPITE G
Sbjct: 2 QITVREALRDAMQEEMLRDEKVFVIGEEVAEYQGAYKVTQGLLEQFGSKRVIDTPITEYG 61
Query: 96 FTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA 155
F G+ VGAA+ GL+P+VEFMTFNF+MQA DHI+NSAAK++YMS GQ+ PIVFRGPNGAA
Sbjct: 62 FAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQVKCPIVFRGPNGAA 121
Query: 156 AGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFP 215
+ V AQHS Y A Y+ +PGLKV++PYS+ED +GL+ AIRD +PV+FLENE+LYG SF
Sbjct: 122 SRVAAQHSQNYTACYSHIPGLKVVAPYSAEDHKGLMLTAIRDDNPVIFLENEILYGHSF- 180
Query: 216 VSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEV 269
+V D +P KAKI +EG +VTI FS V L+L IL + I E+
Sbjct: 181 ---DVPDIIEPIPFSKAKILKEGSNVTIVTFSIQVKLALDVVNILQNDNIDCEL 231
>sp|Q85FX1|ODPB_CYAME Pyruvate dehydrogenase E1 component subunit beta OS=Cyanidioschyzon
merolae GN=pdhB PE=3 SV=1
Length = 326
Score = 214 bits (546), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 106/236 (44%), Positives = 158/236 (66%), Gaps = 4/236 (1%)
Query: 34 VKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITE 93
+ ++ + EAL A+DEEM+ D +VF++GE+VG Y G+YK++K L KYG RVLDTPI E
Sbjct: 2 LHKLFMYEALREAIDEEMARDKRVFVLGEDVGHYGGSYKVTKQLHTKYGDLRVLDTPIAE 61
Query: 94 AGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNG 153
FTG+ +GAA GLKPVVE M +F + A + I N+A +Y S G S+P+V RGP G
Sbjct: 62 NSFTGMAIGAAMTGLKPVVEGMNLSFLLLAFNQISNNAGMLHYTSGGNWSIPLVIRGPGG 121
Query: 154 AAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGES 213
+ A+HS A++ +VPGLK+++ + +A+GLLKAAIRD +PV+FLE+ LLY
Sbjct: 122 IGKQLSAEHSQRIEAYFQAVPGLKIVACSTPYNAKGLLKAAIRDNNPVLFLEHVLLYN-- 179
Query: 214 FPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEV 269
+ E+ + LP+ KA++ REG DVTI +S+++ ++A + L +G++ EV
Sbjct: 180 --LKQEIPKQEYVLPLDKAQVVREGSDVTIITYSRMLHHVMQAVKQLVAQGMNPEV 233
>sp|Q8MA03|ODPB_CHAGL Pyruvate dehydrogenase E1 component subunit beta
OS=Chaetosphaeridium globosum GN=pdhB PE=3 SV=1
Length = 326
Score = 206 bits (525), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 99/234 (42%), Positives = 153/234 (65%), Gaps = 4/234 (1%)
Query: 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAG 95
++++ EAL ALDEEM DP V +MGE+VG Y G+YK++KG EKYG R+LDTPI E
Sbjct: 3 EVLLFEALRDALDEEMQRDPSVLVMGEDVGHYGGSYKVTKGFHEKYGDLRLLDTPIAENS 62
Query: 96 FTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA 155
FTG+ +GAA GL+P+VE M F + A + I N+A +Y S G +PIV RGP G
Sbjct: 63 FTGMAIGAAMTGLRPIVEGMNMGFLLLAFNQIANNAGMLHYTSGGNFKIPIVIRGPGGVG 122
Query: 156 AGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFP 215
+GA+HS +++ SVPGL++++ + + +GLLK+AIR+ +PV+F E+ LLY
Sbjct: 123 RQLGAEHSQRLESYFQSVPGLQMVACSTPYNGKGLLKSAIRNDNPVIFFEHVLLYN---- 178
Query: 216 VSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEV 269
++ +++ + L + KA++ R G D+TI +S++ L+AA++L +G E+
Sbjct: 179 LNENLIEQEYLLCLEKAEVVRPGNDITILTYSRMRHHVLQAAKVLVNKGYDPEI 232
>sp|P37941|ODBB_BACSU 2-oxoisovalerate dehydrogenase subunit beta OS=Bacillus subtilis
(strain 168) GN=bfmBAB PE=1 SV=1
Length = 327
Score = 204 bits (518), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 102/229 (44%), Positives = 146/229 (63%), Gaps = 3/229 (1%)
Query: 41 EALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIG 100
+A+N A+ EEM D +VF++GE+VG G +K + GL E++G ERV+DTP+ E+ G+G
Sbjct: 8 DAINLAMKEEMERDSRVFVLGEDVGRKGGVFKATAGLYEQFGEERVMDTPLAESAIAGVG 67
Query: 101 VGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGA 160
+GAA YG++P+ E +F M A++ II+ AAK Y S+ S PIV R P G
Sbjct: 68 IGAAMYGMRPIAEMQFADFIMPAVNQIISEAAKIRYRSNNDWSCPIVVRAPYGGGVHGAL 127
Query: 161 QHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEV 220
HS A +A+ PGLK++ P + DA+GLLKAA+RD DPV+F E++ Y + EV
Sbjct: 128 YHSQSVEAIFANQPGLKIVMPSTPYDAKGLLKAAVRDEDPVLFFEHKRAYRL---IKGEV 184
Query: 221 LDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEV 269
+ LPIGKA ++REG D+T+ + V +L+AAE L K+GISA V
Sbjct: 185 PADDYVLPIGKADVKREGDDITVITYGLCVHFALQAAERLEKDGISAHV 233
>sp|Q1XDM1|ODPB_PORYE Pyruvate dehydrogenase E1 component subunit beta OS=Porphyra
yezoensis GN=pdhB PE=3 SV=1
Length = 331
Score = 203 bits (517), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 101/236 (42%), Positives = 152/236 (64%), Gaps = 4/236 (1%)
Query: 34 VKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITE 93
+ ++ + +AL +A DEEM+ DP V ++GE+VG Y G+YK++K L KYG RVLDTPI E
Sbjct: 1 MSKIFMFDALRAATDEEMAKDPTVCVIGEDVGHYGGSYKVTKDLHSKYGDLRVLDTPIAE 60
Query: 94 AGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNG 153
FTG+ +GAA GL+P+VE M +F + A + I N+A Y S G ++P+V RGP G
Sbjct: 61 NSFTGMAIGAAITGLRPIVEGMNMSFLLLAFNQISNNAGMLRYTSGGNFTLPLVIRGPGG 120
Query: 154 AAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGES 213
+GA+HS A++ ++PGLK+++ + +A+GLLK+AIRD +PVVF E+ LLY
Sbjct: 121 VGRQLGAEHSQRLEAYFQAIPGLKIVACSTPYNAKGLLKSAIRDNNPVVFFEHVLLYN-- 178
Query: 214 FPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEV 269
+ E+ + LP+ K + R+GKD+TI +S++ ++A L KEG EV
Sbjct: 179 --LQEEIPQEEYFLPLNKVEFVRKGKDITILTYSRMRHHVIQALPALLKEGYDPEV 232
>sp|Q1ACL0|ODPB_CHAVU Pyruvate dehydrogenase E1 component subunit beta OS=Chara vulgaris
GN=pdhB PE=3 SV=1
Length = 326
Score = 201 bits (510), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 94/236 (39%), Positives = 152/236 (64%), Gaps = 4/236 (1%)
Query: 34 VKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITE 93
+ + ++ EALN + EE+ DPKVF++GE++G Y G+YK++KGL EKYG R+LDTPI E
Sbjct: 1 MSEKLLYEALNEGIHEEIERDPKVFVIGEDIGHYGGSYKVTKGLFEKYGNLRILDTPIAE 60
Query: 94 AGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNG 153
FTGI +GAA GL+P++E M F + A + I N+A +Y S G + P+V RGP G
Sbjct: 61 NSFTGIAIGAAMTGLRPIIEGMNMGFLLLAFNQIANNAGMLHYTSGGNFTTPLVVRGPGG 120
Query: 154 AAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGES 213
+GA+HS +++ SVPGL++++ + +A+GL+K+AIR +P++F E+ LLY
Sbjct: 121 VGRQLGAEHSQRLESYFQSVPGLQMVACSTPYNAKGLIKSAIRSQNPIIFFEHVLLYN-- 178
Query: 214 FPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEV 269
+ + + +P+ KA++ R G +TI +S++ L+AA+ L ++G E+
Sbjct: 179 --IKENIPQKEYLVPLEKAELVRSGNQITILTYSRMRYHVLQAAKTLIEKGYDPEI 232
>sp|Q6B8T1|ODPB_GRATL Pyruvate dehydrogenase E1 component subunit beta OS=Gracilaria
tenuistipitata var. liui GN=pdhB PE=3 SV=1
Length = 323
Score = 200 bits (509), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 99/236 (41%), Positives = 151/236 (63%), Gaps = 4/236 (1%)
Query: 34 VKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITE 93
+ ++++ +AL A DEEM D VF++GE+VG Y G+YK++K L KYG RVLDTPI E
Sbjct: 1 MTEVLMFDALREATDEEMQNDSSVFILGEDVGHYGGSYKVTKDLHSKYGDLRVLDTPIAE 60
Query: 94 AGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNG 153
F G+ +GAA GL+P+VE M +F + A + I N+A Y S G +PIV RGP G
Sbjct: 61 NSFMGMAIGAAITGLRPIVEGMNMSFLLLAFNQISNNAGMLRYTSGGNFQIPIVIRGPGG 120
Query: 154 AAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGES 213
+GA+HS A++ ++PGLK+++ + +A+GLLK+AIRD +PV+F E+ LLY
Sbjct: 121 VGRQLGAEHSQRLEAYFQAIPGLKIVACSTPYNAKGLLKSAIRDNNPVIFFEHVLLYN-- 178
Query: 214 FPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEV 269
+ E+ + + LP+ KA++ R+G DVTI +S++ ++A L +G + EV
Sbjct: 179 --LKDELPNDEYFLPLDKAELVRDGLDVTILTYSRMRHHVMQAVVDLVNDGYNPEV 232
>sp|Q5SLR3|ODBB_THET8 2-oxoisovalerate dehydrogenase subunit beta OS=Thermus thermophilus
(strain HB8 / ATCC 27634 / DSM 579) GN=TTHA0230 PE=1
SV=1
Length = 324
Score = 200 bits (508), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 106/233 (45%), Positives = 150/233 (64%), Gaps = 3/233 (1%)
Query: 37 MMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGF 96
M + +ALN ALDEEM+ DP+V ++GE+VG+ G + +++GLL+KYGP+RV+DTP++EA
Sbjct: 4 MTMVQALNRALDEEMAKDPRVVVLGEDVGKRGGVFLVTEGLLQKYGPDRVMDTPLSEAAI 63
Query: 97 TGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAA 156
G +G A +GL+PV E ++ D +++ AK Y S GQ + P+V R P+G
Sbjct: 64 VGAALGMAAHGLRPVAEIQFADYIFPGFDQLVSQVAKLRYRSGGQFTAPLVVRMPSGGGV 123
Query: 157 GVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPV 216
G HS A + GLKV++ + DA+GLLKAAIRD DPVVFLE + LY V
Sbjct: 124 RGGHHHSQSPEAHFVHTAGLKVVAVSTPYDAKGLLKAAIRDEDPVVFLEPKRLYRS---V 180
Query: 217 SAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEV 269
EV + + LPIGKA + REGKD+T+ + ++ L+AA LAK G+SAEV
Sbjct: 181 KEEVPEEDYTLPIGKAALRREGKDLTLIGYGTVMPEVLQAAAELAKAGVSAEV 233
>sp|P51266|ODPB_PORPU Pyruvate dehydrogenase E1 component subunit beta OS=Porphyra
purpurea GN=pdhB PE=3 SV=1
Length = 331
Score = 199 bits (505), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/229 (42%), Positives = 148/229 (64%), Gaps = 4/229 (1%)
Query: 41 EALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIG 100
+AL +A DEEM D V ++GE+VG Y G+YK++K L KYG RVLDTPI E FTG+
Sbjct: 8 DALRAATDEEMEKDLTVCVIGEDVGHYGGSYKVTKDLHSKYGDLRVLDTPIAENSFTGMA 67
Query: 101 VGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGA 160
+GAA GL+P+VE M +F + A + I N+A Y S G ++P+V RGP G +GA
Sbjct: 68 IGAAITGLRPIVEGMNMSFLLLAFNQISNNAGMLRYTSGGNFTLPLVIRGPGGVGRQLGA 127
Query: 161 QHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEV 220
+HS A++ ++PGLK+++ + +A+GLLK+AIRD +PVVF E+ LLY + E+
Sbjct: 128 EHSQRLEAYFQAIPGLKIVACSTPYNAKGLLKSAIRDNNPVVFFEHVLLYN----LQEEI 183
Query: 221 LDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEV 269
+ + +P+ KA++ R+GKD+TI +S++ +A +L +G EV
Sbjct: 184 PEDEYLIPLDKAEVVRKGKDITILTYSRMRHHVTEALPLLLNDGYDPEV 232
>sp|Q32RS0|ODPB_STAPU Pyruvate dehydrogenase E1 component subunit beta OS=Staurastrum
punctulatum GN=pdhB PE=3 SV=1
Length = 328
Score = 197 bits (500), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 99/238 (41%), Positives = 150/238 (63%), Gaps = 8/238 (3%)
Query: 34 VKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITE 93
+ +M++ EAL L EEM DPKV +MGE+VG Y G+YK++KG EKYG R+LDTPI E
Sbjct: 1 MSEMLLFEALREGLQEEMDRDPKVLVMGEDVGHYGGSYKVTKGFAEKYGDLRLLDTPIAE 60
Query: 94 AGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNG 153
FTG+ +GAA GL+PVVE M F + A + I N+A +Y S ++PIV RGP G
Sbjct: 61 NSFTGMAIGAAMTGLRPVVEGMNMGFLLLAFNQIANNAGMLHYTSGANFTIPIVIRGPGG 120
Query: 154 AAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYG-- 211
+GA+HS +++ SVPGL++++ + +A+GL+K++IR +PV+ E+ LLY
Sbjct: 121 VGRQLGAEHSQRLESYFQSVPGLQLVACSTPINAKGLIKSSIRSENPVILFEHVLLYNLK 180
Query: 212 ESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEV 269
E+ P D+ + + + KA+I R G D+TI +S++ L+A + L +G E+
Sbjct: 181 ETIP------DNEYLVCLEKAEIVRPGTDITILTYSRMRHHVLQATKSLVYKGYDPEI 232
>sp|Q72GU2|ODBB_THET2 2-oxoisovalerate dehydrogenase subunit beta OS=Thermus thermophilus
(strain HB27 / ATCC BAA-163 / DSM 7039) GN=TT_C1756 PE=3
SV=1
Length = 324
Score = 196 bits (499), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 105/233 (45%), Positives = 149/233 (63%), Gaps = 3/233 (1%)
Query: 37 MMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGF 96
M + +ALN ALDEEM+ DP+V ++GE+VG+ G + +++GLL+KYGP+RV+DTP++EA
Sbjct: 4 MTMVQALNRALDEEMAKDPRVVVLGEDVGKRGGVFLVTEGLLQKYGPDRVMDTPLSEAAI 63
Query: 97 TGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAA 156
G +G A +GL+PV E ++ D +++ AK Y S GQ + P+V R P+G
Sbjct: 64 VGAALGMAAHGLRPVAEIQFADYIFPGFDQLVSQVAKLRYRSGGQFTAPLVVRMPSGGGV 123
Query: 157 GVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPV 216
G HS A + GLKV++ + DA+GLLKAAIRD DPVVFLE + LY V
Sbjct: 124 RGGHHHSQSPEAHFVHTAGLKVVAVSTPYDAKGLLKAAIRDEDPVVFLEPKRLYRS---V 180
Query: 217 SAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEV 269
EV + + L IGKA + REGKD+T+ + ++ L+AA LAK G+SAEV
Sbjct: 181 KEEVPEEDYTLSIGKAALRREGKDLTLIGYGTVMPEVLQAAAELAKAGVSAEV 233
>sp|Q9C6Z3|ODPB2_ARATH Pyruvate dehydrogenase E1 component subunit beta-2, chloroplastic
OS=Arabidopsis thaliana GN=PDH-E1 BETA PE=2 SV=1
Length = 406
Score = 196 bits (497), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 94/239 (39%), Positives = 153/239 (64%), Gaps = 4/239 (1%)
Query: 31 SSAVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTP 90
+S ++++ EAL L+EEM DP V +MGE+VG Y G+YK++KGL +K+G RVLDTP
Sbjct: 80 ASTGHELLLFEALQEGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKFGDLRVLDTP 139
Query: 91 ITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRG 150
I E FTG+G+GAA GL+PV+E M F + A + I N+ +Y S GQ ++P+V RG
Sbjct: 140 ICENAFTGMGIGAAMTGLRPVIEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTIPVVIRG 199
Query: 151 PNGAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLY 210
P G +GA+HS +++ S+PG+++++ + +A+GL+KAAIR +PV+ E+ LLY
Sbjct: 200 PGGVGRQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY 259
Query: 211 GESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEV 269
+ ++ D + + +A++ R G+ +TI +S++ ++AA+ L +G EV
Sbjct: 260 N----LKEKIPDEDYVCNLEEAEMVRPGEHITILTYSRMRYHVMQAAKTLVNKGYDPEV 314
>sp|O64688|ODPB3_ARATH Pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic
OS=Arabidopsis thaliana GN=E1-BETA-2 PE=1 SV=1
Length = 406
Score = 195 bits (496), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/237 (40%), Positives = 151/237 (63%), Gaps = 8/237 (3%)
Query: 35 KQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEA 94
++++ EAL L+EEM DP V +MGE+VG Y G+YK++KGL +K+G RVLDTPI E
Sbjct: 84 HELLLFEALQEGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKFGDLRVLDTPICEN 143
Query: 95 GFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGA 154
FTG+G+GAA GL+PV+E M F + A + I N+ +Y S GQ ++P+V RGP G
Sbjct: 144 AFTGMGIGAAMTGLRPVIEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTIPVVIRGPGGV 203
Query: 155 AAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYG--E 212
+GA+HS +++ S+PG+++++ + +A+GL+KAAIR +PV+ E+ LLY E
Sbjct: 204 GRQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKE 263
Query: 213 SFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEV 269
S P D + + +A++ R G+ +TI +S++ ++AA+ L +G EV
Sbjct: 264 SIP------DEEYICNLEEAEMVRPGEHITILTYSRMRYHVMQAAKTLVNKGYDPEV 314
>sp|Q10G39|ODPB4_ORYSJ Pyruvate dehydrogenase E1 component subunit beta-4, chloroplastic
OS=Oryza sativa subsp. japonica GN=Os03g0645100 PE=2
SV=1
Length = 400
Score = 193 bits (491), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/235 (42%), Positives = 149/235 (63%), Gaps = 4/235 (1%)
Query: 35 KQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEA 94
++++ EAL AL EEM DP V + GE+VG Y G+YK++KGL E +G RVLDTPI E
Sbjct: 78 HEVLLFEALREALIEEMKEDPTVCVFGEDVGHYGGSYKVTKGLAEMFGDLRVLDTPIAEN 137
Query: 95 GFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGA 154
FTG+GVGAA GL+PVVE M F + A + I N+ +Y S GQ +PIV RGP G
Sbjct: 138 SFTGMGVGAAMKGLRPVVEGMNMGFLLLAYNQISNNCGMLHYTSGGQFKIPIVIRGPGGV 197
Query: 155 AAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESF 214
+GA+HS +++ S+PGL++++ + +A+GL+KAAIR +PVV E+ LLY
Sbjct: 198 GRQLGAEHSQRLESYFQSIPGLQMVACSTPYNAKGLMKAAIRSENPVVLFEHVLLYN--- 254
Query: 215 PVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEV 269
+ ++ D + L + +A++ R G+ VTI +S++ ++AA+ L +G EV
Sbjct: 255 -LKEKIPDEEYVLCLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEV 308
>sp|Q9MUR4|ODPB_MESVI Pyruvate dehydrogenase E1 component subunit beta OS=Mesostigma
viride GN=pdhB PE=3 SV=1
Length = 327
Score = 193 bits (490), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/236 (42%), Positives = 148/236 (62%), Gaps = 7/236 (2%)
Query: 37 MMVR---EALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITE 93
M VR EALN A+DEEM+ + KV L+GE++G Y G+YK+++ L KYG RV+DTPI E
Sbjct: 1 MTVRFLFEALNMAIDEEMARNDKVALLGEDIGHYGGSYKVTQNLYAKYGEHRVIDTPIAE 60
Query: 94 AGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNG 153
F G +GAA GL VVE M F + A I N+ + S G +PIV RGP G
Sbjct: 61 NSFVGAAIGAAMTGLVTVVEGMNMGFILLAFSQISNNMGMLSATSGGHYHIPIVLRGPGG 120
Query: 154 AAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGES 213
+GA+HS ++ SVPGL++++ + +A+GLLK+AIR +P+ FLE+ LLY
Sbjct: 121 VGKQLGAEHSQRLECYFQSVPGLQIVACSTPYNAKGLLKSAIRSKNPIFFLEHVLLYN-- 178
Query: 214 FPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEV 269
+ AEV D+ + LP+ KA+I R+G D+TI +S++ ++A ++L ++G E+
Sbjct: 179 --LKAEVPDNDYVLPLEKAEIVRQGNDITILTYSRMRYNVIQAVKVLVEKGYDPEI 232
>sp|Q32RM2|ODPB_ZYGCR Pyruvate dehydrogenase E1 component subunit beta OS=Zygnema
circumcarinatum GN=pdhB PE=3 SV=2
Length = 325
Score = 192 bits (489), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/234 (39%), Positives = 149/234 (63%), Gaps = 4/234 (1%)
Query: 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAG 95
++++ EAL L EEM DP+V +MGE+VG Y G+YK++KG E+YG R+LDTPI E
Sbjct: 3 EVLLFEALRQGLQEEMDRDPRVMVMGEDVGHYGGSYKVTKGFAERYGDLRLLDTPIAENS 62
Query: 96 FTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA 155
FTG+ +GAA GL+PVVE M F + A + I N+A +Y S G ++PIV RGP G
Sbjct: 63 FTGMAIGAAMTGLRPVVEGMNMGFLLLAFNQIANNAGMLHYTSGGNFTIPIVIRGPGGVG 122
Query: 156 AGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFP 215
+GA+HS +++ SVPGL++++ + +A+GL+K+AIR +P++ E+ LLY
Sbjct: 123 RQLGAEHSQRLESYFQSVPGLQMVACSTPYNAKGLIKSAIRSDNPIILFEHVLLYN---- 178
Query: 216 VSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEV 269
+ ++ + + + + KA++ R G D+TI +S++ L+A + L +G E+
Sbjct: 179 LKEDLAEEEYLVCLEKAEVVRPGNDITILTYSRMRHNVLQATKSLVYKGYDPEI 232
>sp|Q9TLS3|ODPB_CYACA Pyruvate dehydrogenase E1 component subunit beta OS=Cyanidium
caldarium GN=pdhB PE=3 SV=1
Length = 327
Score = 190 bits (482), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/233 (41%), Positives = 144/233 (61%), Gaps = 4/233 (1%)
Query: 37 MMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGF 96
M + EAL +A+DEEM D VF++GE+VG Y G+YK++K L KYG RVLD PI E F
Sbjct: 4 MFLYEALRAAIDEEMGKDSNVFIVGEDVGHYGGSYKVTKDLHVKYGDLRVLDAPIAENSF 63
Query: 97 TGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAA 156
TG+ +GAA GL+P+VE M F + A + I N+ + Y S G ++P+V RGP G
Sbjct: 64 TGMAIGAAMTGLRPIVEGMNMGFMLLAFNQISNNLSMLQYTSGGNFNIPVVIRGPGGIGK 123
Query: 157 GVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPV 216
+ A+HS + + S+PGL++++ ++ +A+GLLK+AI + P++FLE+ LLY +
Sbjct: 124 QLAAEHSQRLESCFQSIPGLQIVACSTAYNAKGLLKSAIIEKKPILFLEHVLLYN----L 179
Query: 217 SAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEV 269
V D + LP+ KA++ R G DVTI +S++ L A E L G E+
Sbjct: 180 KGFVPDEEYYLPLDKAEVVRSGSDVTIVTYSRMRYHVLAAVEKLVLNGQDPEI 232
>sp|Q2QM55|ODPB3_ORYSJ Pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic
OS=Oryza sativa subsp. japonica GN=Os12g0616900 PE=2
SV=1
Length = 391
Score = 189 bits (479), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/234 (41%), Positives = 147/234 (62%), Gaps = 4/234 (1%)
Query: 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAG 95
++++ EAL AL EEM DP V + GE+VG Y G+YK++KGL E +G RVLDTPI E
Sbjct: 70 EVLLFEALREALIEEMKEDPTVCVFGEDVGHYGGSYKVTKGLAEMFGDLRVLDTPIAENS 129
Query: 96 FTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA 155
F G+GVGAA GL+P+VE M F + A + I N+ +Y S GQ +PIV RGP G
Sbjct: 130 FAGMGVGAAMKGLRPIVEGMNMGFLLLAYNQISNNCGMLHYTSGGQFKIPIVIRGPGGVG 189
Query: 156 AGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFP 215
+GA+HS +++ S+PGL++++ + +A+GL+KAAIR +PVV E+ LLY
Sbjct: 190 RQLGAEHSQRLESYFQSIPGLQMVACSTPYNAKGLMKAAIRSENPVVLFEHVLLYN---- 245
Query: 216 VSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEV 269
+ ++ D + + +A++ R G+ VTI +S++ ++AA+ L +G EV
Sbjct: 246 LKEKIPDEEYICCLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEV 299
>sp|P21874|ODPB_GEOSE Pyruvate dehydrogenase E1 component subunit beta OS=Geobacillus
stearothermophilus GN=pdhB PE=1 SV=2
Length = 325
Score = 187 bits (475), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 102/234 (43%), Positives = 139/234 (59%), Gaps = 3/234 (1%)
Query: 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAG 95
QM + +A+ AL E+ DP V + GE+VG G ++ ++GL ++G +RV DTP+ E+G
Sbjct: 3 QMTMVQAITDALRIELKNDPNVLIFGEDVGVNGGVFRATEGLQAEFGEDRVFDTPLAESG 62
Query: 96 FTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA 155
G+ +G A G +PV E F F + +D I A+ Y + G+ +PI R P G
Sbjct: 63 IGGLAIGLALQGFRPVPEIQFFGFVYEVMDSICGQMARIRYRTGGRYHMPITIRSPFGGG 122
Query: 156 AGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFP 215
HS A PGLKV+ P + DA+GLL +AIRD DPV+FLE+ LY SF
Sbjct: 123 VHTPELHSDSLEGLVAQQPGLKVVIPSTPYDAKGLLISAIRDNDPVIFLEHLKLY-RSF- 180
Query: 216 VSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEV 269
EV + + +PIGKA I+REGKD+TI A+ +V SLKAA L KEGISAEV
Sbjct: 181 -RQEVPEGEYTIPIGKADIKREGKDITIIAYGAMVHESLKAAAELEKEGISAEV 233
>sp|A2CI50|ODPB_CHLAT Pyruvate dehydrogenase E1 component subunit beta OS=Chlorokybus
atmophyticus GN=pdhB PE=3 SV=1
Length = 335
Score = 179 bits (454), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/236 (42%), Positives = 147/236 (62%), Gaps = 7/236 (2%)
Query: 37 MMVR---EALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITE 93
M VR EAL A+DEEM + +V L+GE++G Y G+YK+++GL KYG RV+DTPI E
Sbjct: 1 MAVRFLFEALQKAIDEEMEREKRVVLIGEDIGHYGGSYKVTQGLYGKYGKHRVIDTPIAE 60
Query: 94 AGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNG 153
F G VGAA GL PVVE M F + A I N+ S G VP+V RGP G
Sbjct: 61 YSFVGAAVGAAATGLIPVVEGMNMAFILLAYSQISNNMGMLCATSGGHFQVPMVLRGPGG 120
Query: 154 AAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGES 213
+GA+HS +++ SVPGL++++ + +A+GLLK+AIR +P++F+E+ LLY
Sbjct: 121 IGKQLGAEHSQRLESYFQSVPGLQIVTCSTPYNAKGLLKSAIRSKNPILFIEHVLLYN-- 178
Query: 214 FPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEV 269
+ EV D+ + LP+ KA++ REG D+T+ +S+ ++A ++L +EG EV
Sbjct: 179 --LKGEVPDNDYLLPLEKAELVREGSDITVLTYSRQRYNVIQAVKVLVEEGYDPEV 232
>sp|P35488|ODPB_ACHLA Pyruvate dehydrogenase E1 component subunit beta OS=Acholeplasma
laidlawii GN=pdhB PE=1 SV=1
Length = 327
Score = 173 bits (438), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/229 (40%), Positives = 131/229 (57%), Gaps = 3/229 (1%)
Query: 41 EALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIG 100
EA+N A+D+ M D + + GE+ G G ++++ GL +KYG RV DTPI E+ G
Sbjct: 8 EAINQAIDQAMEKDESIVVFGEDAGFEGGVFRVTAGLQKKYGETRVFDTPIAESAIVGSA 67
Query: 101 VGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGA 160
VG A GLKP+ E F ++ AA+ S GQ +VP+V R P+G
Sbjct: 68 VGMAINGLKPIAEIQFDGFIFPGYTDLVTHAARMRNRSRGQFTVPMVLRLPHGGGIRALE 127
Query: 161 QHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEV 220
HS + S+PGLKV++P + DA+GLL AAI DPDPVVFLE + +Y EV
Sbjct: 128 HHSEALEVLFGSIPGLKVVTPSTPYDAKGLLLAAINDPDPVVFLEPKRIYRAG---KQEV 184
Query: 221 LDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEV 269
+ +PIGKAK+ ++G D+T+ A+ IV KA +++ EGIS E+
Sbjct: 185 PAEMYEIPIGKAKVVKQGTDMTVVAWGSIVREVEKAVKLVEAEGISVEI 233
>sp|P27746|ACOB_CUPNH Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta
OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM
428 / Stanier 337) GN=acoB PE=1 SV=3
Length = 338
Score = 172 bits (437), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 149/245 (60%), Gaps = 15/245 (6%)
Query: 35 KQMMVREALNSALDEEMSADPKVFLMGEEV-------GE---YQGAYKISKGLLEKYGPE 84
+++ ++ A+N A+D+EM+ DP V ++GE++ GE + G ++KGL K+G +
Sbjct: 3 RKLSIKLAINEAIDQEMTRDPSVIMLGEDIVGGAGADGEKDAWGGVLGVTKGLYAKHG-D 61
Query: 85 RVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISV 144
R+LDTP++E+ + G +GAA G++P+ E M +F D I N AAK YM G+
Sbjct: 62 RLLDTPLSESAYVGAAIGAAACGMRPIAELMFIDFMGVCFDQIFNQAAKFRYMFGGKAET 121
Query: 145 PIVFRGPNGAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL 204
P+V R GA AQHS + +PGLKV+ P + D +GLL AIRD DPV+F
Sbjct: 122 PVVIRAMVGAGFRAAAQHSQMLTPLFTHIPGLKVVCPSTPYDTKGLLIQAIRDNDPVIFC 181
Query: 205 ENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEG 264
E++ LYG + EV + ++ +P G+A I R+GKDV+I + +V +L+AA LAKEG
Sbjct: 182 EHKNLYG----LEGEVPEGAYAIPFGEANIVRDGKDVSIVTYGLMVHRALEAAATLAKEG 237
Query: 265 ISAEV 269
I AE+
Sbjct: 238 IEAEI 242
>sp|Q5HGZ0|ODPB_STAAC Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
aureus (strain COL) GN=pdhB PE=3 SV=1
Length = 325
Score = 167 bits (424), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 89/234 (38%), Positives = 135/234 (57%), Gaps = 3/234 (1%)
Query: 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAG 95
QM + +A+N AL E+ D V + GE+VG G +++++GL +++G +RV DTP+ E+G
Sbjct: 3 QMTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESG 62
Query: 96 FTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA 155
G+ +G A G +PV+E F + D I A++ + S G + P+ RGP G
Sbjct: 63 IGGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGTKTAPVTIRGPFGGG 122
Query: 156 AGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFP 215
H+ A PGLKV+ P DA+GLL ++IR DPVV+LE+ LY SF
Sbjct: 123 VHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLY-RSF- 180
Query: 216 VSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEV 269
EV + + + IGKA +++EG D++I + +V S+KAAE L K+G S EV
Sbjct: 181 -REEVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEV 233
>sp|P0A0A2|ODPB_STAAW Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
aureus (strain MW2) GN=pdhB PE=3 SV=1
Length = 325
Score = 165 bits (417), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 88/234 (37%), Positives = 134/234 (57%), Gaps = 3/234 (1%)
Query: 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAG 95
QM + +A+N AL E+ D V + GE+VG G +++++GL +++G +RV DTP+ E+G
Sbjct: 3 QMTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESG 62
Query: 96 FTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA 155
G+ +G A G +PV+E F + D I A++ + S G + P+ R P G
Sbjct: 63 IGGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGTKTAPVTIRSPFGGG 122
Query: 156 AGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFP 215
H+ A PGLKV+ P DA+GLL ++IR DPVV+LE+ LY SF
Sbjct: 123 VHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLY-RSF- 180
Query: 216 VSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEV 269
EV + + + IGKA +++EG D++I + +V S+KAAE L K+G S EV
Sbjct: 181 -REEVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEV 233
>sp|P0A0A3|ODPB_STAAU Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
aureus GN=pdhB PE=1 SV=1
Length = 325
Score = 165 bits (417), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 88/234 (37%), Positives = 134/234 (57%), Gaps = 3/234 (1%)
Query: 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAG 95
QM + +A+N AL E+ D V + GE+VG G +++++GL +++G +RV DTP+ E+G
Sbjct: 3 QMTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESG 62
Query: 96 FTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA 155
G+ +G A G +PV+E F + D I A++ + S G + P+ R P G
Sbjct: 63 IGGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGTKTAPVTIRSPFGGG 122
Query: 156 AGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFP 215
H+ A PGLKV+ P DA+GLL ++IR DPVV+LE+ LY SF
Sbjct: 123 VHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLY-RSF- 180
Query: 216 VSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEV 269
EV + + + IGKA +++EG D++I + +V S+KAAE L K+G S EV
Sbjct: 181 -REEVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEV 233
>sp|Q6GAC0|ODPB_STAAS Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
aureus (strain MSSA476) GN=pdhB PE=3 SV=1
Length = 325
Score = 165 bits (417), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 88/234 (37%), Positives = 134/234 (57%), Gaps = 3/234 (1%)
Query: 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAG 95
QM + +A+N AL E+ D V + GE+VG G +++++GL +++G +RV DTP+ E+G
Sbjct: 3 QMTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESG 62
Query: 96 FTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA 155
G+ +G A G +PV+E F + D I A++ + S G + P+ R P G
Sbjct: 63 IGGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGTKTAPVTIRSPFGGG 122
Query: 156 AGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFP 215
H+ A PGLKV+ P DA+GLL ++IR DPVV+LE+ LY SF
Sbjct: 123 VHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLY-RSF- 180
Query: 216 VSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEV 269
EV + + + IGKA +++EG D++I + +V S+KAAE L K+G S EV
Sbjct: 181 -REEVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEV 233
>sp|Q6GHZ1|ODPB_STAAR Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
aureus (strain MRSA252) GN=pdhB PE=3 SV=1
Length = 325
Score = 165 bits (417), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 88/234 (37%), Positives = 134/234 (57%), Gaps = 3/234 (1%)
Query: 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAG 95
QM + +A+N AL E+ D V + GE+VG G +++++GL +++G +RV DTP+ E+G
Sbjct: 3 QMTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESG 62
Query: 96 FTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA 155
G+ +G A G +PV+E F + D I A++ + S G + P+ R P G
Sbjct: 63 IGGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGTKTAPVTIRSPFGGG 122
Query: 156 AGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFP 215
H+ A PGLKV+ P DA+GLL ++IR DPVV+LE+ LY SF
Sbjct: 123 VHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLY-RSF- 180
Query: 216 VSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEV 269
EV + + + IGKA +++EG D++I + +V S+KAAE L K+G S EV
Sbjct: 181 -REEVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEV 233
>sp|P99063|ODPB_STAAN Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
aureus (strain N315) GN=pdhB PE=1 SV=1
Length = 325
Score = 165 bits (417), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 88/234 (37%), Positives = 134/234 (57%), Gaps = 3/234 (1%)
Query: 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAG 95
QM + +A+N AL E+ D V + GE+VG G +++++GL +++G +RV DTP+ E+G
Sbjct: 3 QMTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESG 62
Query: 96 FTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA 155
G+ +G A G +PV+E F + D I A++ + S G + P+ R P G
Sbjct: 63 IGGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGTKTAPVTIRSPFGGG 122
Query: 156 AGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFP 215
H+ A PGLKV+ P DA+GLL ++IR DPVV+LE+ LY SF
Sbjct: 123 VHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLY-RSF- 180
Query: 216 VSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEV 269
EV + + + IGKA +++EG D++I + +V S+KAAE L K+G S EV
Sbjct: 181 -REEVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEV 233
>sp|P0A0A1|ODPB_STAAM Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
aureus (strain Mu50 / ATCC 700699) GN=pdhB PE=1 SV=1
Length = 325
Score = 165 bits (417), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 88/234 (37%), Positives = 134/234 (57%), Gaps = 3/234 (1%)
Query: 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAG 95
QM + +A+N AL E+ D V + GE+VG G +++++GL +++G +RV DTP+ E+G
Sbjct: 3 QMTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESG 62
Query: 96 FTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA 155
G+ +G A G +PV+E F + D I A++ + S G + P+ R P G
Sbjct: 63 IGGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGTKTAPVTIRSPFGGG 122
Query: 156 AGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFP 215
H+ A PGLKV+ P DA+GLL ++IR DPVV+LE+ LY SF
Sbjct: 123 VHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLY-RSF- 180
Query: 216 VSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEV 269
EV + + + IGKA +++EG D++I + +V S+KAAE L K+G S EV
Sbjct: 181 -REEVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEV 233
>sp|Q8CPN2|ODPB_STAES Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=pdhB PE=3 SV=1
Length = 325
Score = 162 bits (410), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/234 (37%), Positives = 134/234 (57%), Gaps = 3/234 (1%)
Query: 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAG 95
QM + +A+N AL E+ D V + GE+VG G +++++GL +++G +RV DTP+ E+G
Sbjct: 3 QMTMVQAINDALKSELKRDEDVLVFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESG 62
Query: 96 FTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA 155
G+ +G A G +PV+E F + D + A++ + S G P+ R P G
Sbjct: 63 IGGLALGLAVTGFRPVMEIQFLGFVYEVFDEVAGQIARTRFRSGGTKPAPVTIRTPFGGG 122
Query: 156 AGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFP 215
H+ A PGLKV+ P DA+GLL ++I+ DPVV+LE+ LY SF
Sbjct: 123 VHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIQSNDPVVYLEHMKLY-RSF- 180
Query: 216 VSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEV 269
EV + + + IGKA +++EG D+T+ ++ +V SLKAAE L K+G S EV
Sbjct: 181 -REEVPEEEYKIDIGKANVKKEGNDITLISYGAMVQESLKAAEELEKDGYSVEV 233
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,517,539
Number of Sequences: 539616
Number of extensions: 4128877
Number of successful extensions: 11925
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 224
Number of HSP's successfully gapped in prelim test: 341
Number of HSP's that attempted gapping in prelim test: 11290
Number of HSP's gapped (non-prelim): 576
length of query: 270
length of database: 191,569,459
effective HSP length: 116
effective length of query: 154
effective length of database: 128,974,003
effective search space: 19861996462
effective search space used: 19861996462
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)