Your job contains 1 sequence.
>024245
MSKRPPPPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHS
AAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVK
EPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLN
TAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN
PGIPLTAMKVHLEPGLECSMWRNPITMSEH
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 024245
(270 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2123869 - symbol:EMB2757 "AT4G29860" species:3... 791 1.1e-78 1
DICTYBASE|DDB_G0289181 - symbol:gnb1l "guanine nucleotide... 150 4.3e-18 2
ZFIN|ZDB-GENE-050320-77 - symbol:gnb1l "guanine nucleotid... 155 1.0e-14 2
UNIPROTKB|F1NF00 - symbol:GNB1L "Uncharacterized protein"... 176 1.4e-11 1
MGI|MGI:1338057 - symbol:Gnb1l "guanine nucleotide bindin... 164 4.5e-10 1
RGD|1594165 - symbol:Gnb1l "guanine nucleotide binding pr... 162 8.0e-10 1
UNIPROTKB|Q9BYB4 - symbol:GNB1L "Guanine nucleotide-bindi... 154 7.6e-09 1
SGD|S000004951 - symbol:LST8 "Protein required for the tr... 141 8.9e-08 2
UNIPROTKB|F1RK57 - symbol:GNB1L "Uncharacterized protein"... 113 6.0e-07 2
DICTYBASE|DDB_G0277471 - symbol:DDB_G0277471 "putative pr... 126 1.4e-06 2
UNIPROTKB|A4RJA0 - symbol:asa1 "ASTRA-associated protein ... 98 4.6e-05 3
UNIPROTKB|F1MBU4 - symbol:GNB1L "Uncharacterized protein"... 118 0.00012 1
ZFIN|ZDB-GENE-040116-3 - symbol:pafah1b1b "platelet-activ... 116 0.00012 2
MGI|MGI:2384313 - symbol:Rrp9 "RRP9, small subunit (SSU) ... 79 0.00019 3
RGD|1307881 - symbol:Rrp9 "ribosomal RNA processing 9, sm... 79 0.00019 3
UNIPROTKB|Q9PTR5 - symbol:PAFAH1B1 "Lissencephaly-1 homol... 116 0.00025 2
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 116 0.00025 1
CGD|CAL0005182 - symbol:orf19.5413 species:5476 "Candida ... 111 0.00040 2
UNIPROTKB|Q5A7Q3 - symbol:PRP46 "Pre-mRNA-splicing factor... 111 0.00040 2
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 112 0.00053 2
UNIPROTKB|Q96DI7 - symbol:SNRNP40 "U5 small nuclear ribon... 113 0.00055 1
ZFIN|ZDB-GENE-040116-2 - symbol:pafah1b1a "platelet-activ... 113 0.00055 2
UNIPROTKB|F1MLP7 - symbol:SNRNP40 "U5 small nuclear ribon... 113 0.00056 1
UNIPROTKB|F1SVA6 - symbol:SNRNP40 "Uncharacterized protei... 113 0.00056 1
FB|FBgn0015754 - symbol:Lis-1 "Lissencephaly-1" species:7... 108 0.00066 2
UNIPROTKB|B4DQJ1 - symbol:SNRNP40 "U5 small nuclear ribon... 113 0.00069 1
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 112 0.00073 1
ASPGD|ASPL0000017294 - symbol:AN3926 species:162425 "Emer... 114 0.00078 1
UNIPROTKB|A5D7P3 - symbol:PAFAH1B1 "Platelet-activating f... 112 0.00093 2
UNIPROTKB|P43033 - symbol:PAFAH1B1 "Platelet-activating f... 112 0.00093 2
UNIPROTKB|E2QY31 - symbol:PAFAH1B1 "Uncharacterized prote... 112 0.00093 2
UNIPROTKB|J9P388 - symbol:PAFAH1B1 "Uncharacterized prote... 112 0.00093 2
UNIPROTKB|P43034 - symbol:PAFAH1B1 "Platelet-activating f... 112 0.00093 2
UNIPROTKB|F2Z521 - symbol:PAFAH1B1 "Platelet-activating f... 112 0.00093 2
UNIPROTKB|Q9GL51 - symbol:PAFAH1B1 "Platelet-activating f... 112 0.00093 2
MGI|MGI:109520 - symbol:Pafah1b1 "platelet-activating fac... 112 0.00093 2
RGD|620331 - symbol:Pafah1b1 "platelet-activating factor ... 112 0.00093 2
UNIPROTKB|P63004 - symbol:Pafah1b1 "Platelet-activating f... 112 0.00093 2
UNIPROTKB|G4MUL1 - symbol:MGG_07284 "Target-rapamycin com... 110 0.00098 1
>TAIR|locus:2123869 [details] [associations]
symbol:EMB2757 "AT4G29860" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0009790 "embryo
development" evidence=IMP] [GO:0048700 "acquisition of desiccation
tolerance in seed" evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0009790 GO:GO:0080008 GO:GO:0048700 HOGENOM:HOG000007056
OMA:HEEPVMD EMBL:AB191306 IPI:IPI00537829 RefSeq:NP_194715.2
UniGene:At.31884 ProteinModelPortal:Q3MV14 SMR:Q3MV14 STRING:Q3MV14
PRIDE:Q3MV14 EnsemblPlants:AT4G29860.1 GeneID:829108
KEGG:ath:AT4G29860 TAIR:At4g29860 InParanoid:Q3MV14
PhylomeDB:Q3MV14 ProtClustDB:CLSN2680996 Genevestigator:Q3MV14
Uniprot:Q3MV14
Length = 386
Score = 791 (283.5 bits), Expect = 1.1e-78, P = 1.1e-78
Identities = 156/271 (57%), Positives = 200/271 (73%)
Query: 1 MSKRPPPPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHS 60
MSKRPPP DPVAVLRGHR SV DV FH +K +LF G+ GELRIWDT+QHR VSS+W HS
Sbjct: 1 MSKRPPP-DPVAVLRGHRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSSAWAHS 59
Query: 61 AAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVK 120
A+G+++VA P +G +K+ISQGRDGTVKCWDIE+GGLS +P L ++T +YHFCK SLVK
Sbjct: 60 RANGVLAVAASPWLGEDKIISQGRDGTVKCWDIEDGGLSRDPLLILETCAYHFCKFSLVK 119
Query: 121 EPYANAKQA-NEPKDCYEREVGETVDTDSLCDSK----------DDVPAEGPKYMAVAGE 169
+P + ++A + + C E++ G+T + DS+ D AEG ++AV GE
Sbjct: 120 KPKNSLQEAESHSRGCDEQDGGDTCNVQIADDSERSEEDSGLLQDKDHAEGTTFVAVVGE 179
Query: 170 QLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYE 229
Q +EVEIWDLNT ++ +L Q+S SPN S+KGRGMCMAVQ + P +SQGF++VLAGYE
Sbjct: 180 QPTEVEIWDLNTGDKIIQLPQSSPDESPNASTKGRGMCMAVQLFCPPESQGFLHVLAGYE 239
Query: 230 DGSILVWDIRNPGIPLTAMKVHLEPGLECSM 260
DGSIL+WDIRN IPLT++K H EP L S+
Sbjct: 240 DGSILLWDIRNAKIPLTSVKFHSEPVLSLSV 270
>DICTYBASE|DDB_G0289181 [details] [associations]
symbol:gnb1l "guanine nucleotide-binding protein
subunit beta-like protein 1" species:44689 "Dictyostelium
discoideum" [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0289181
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000131 RefSeq:XP_636324.1
ProteinModelPortal:Q54HW5 EnsemblProtists:DDB0267049 GeneID:8626997
KEGG:ddi:DDB_G0289181 OMA:RTHKESA ProtClustDB:CLSZ2846642
Uniprot:Q54HW5
Length = 359
Score = 150 (57.9 bits), Expect = 4.3e-18, Sum P(2) = 4.3e-18
Identities = 38/124 (30%), Positives = 65/124 (52%)
Query: 8 PDPVAVLRGHRASVTDVCFHQTKP-ILFAGTTGGELRIWDTVQHRTVSSSWVHSAA--HG 64
PDP +LRGH+ +V V F + P +L++G+ GEL++W+ + + +S+ HS G
Sbjct: 13 PDPYYILRGHKFNVNSVLFDKVNPNLLYSGSGDGELKLWNIEEKKCISTQIAHSEGIGGG 72
Query: 65 IVSVATGPSIGLNK-----------VISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHF 113
++S+ + N+ ++SQGRDG +K W I + N + ++TNS
Sbjct: 73 VLSLQWLSNDNNNENNNNNDEICGNILSQGRDGVIKIWSIIDNCTFKN-TYRLETNSLSL 131
Query: 114 CKLS 117
K S
Sbjct: 132 GKCS 135
Score = 130 (50.8 bits), Expect = 4.3e-18, Sum P(2) = 4.3e-18
Identities = 32/99 (32%), Positives = 52/99 (52%)
Query: 172 SEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSK-------SQGFVNV 224
S+VEIWDL + +L N+ K G+ M+++ Y ++ S + +
Sbjct: 156 SQVEIWDLKNKQVINKLKPNN----QQLFEK-LGLPMSLKLYYENENNDNSNQSNDQIRL 210
Query: 225 LAGYEDGSILVWDIRNPGIPLTAMKVHLEPGLECSMWRN 263
GYE+G +L+WD+RN IPL + K+H EP L ++ N
Sbjct: 211 CTGYENGELLIWDLRNTSIPLVSSKLHNEPILSFALSNN 249
Score = 41 (19.5 bits), Expect = 7.2e-09, Sum P(2) = 7.2e-09
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 223 NVLA-GYEDGSILVWDI 238
N+LA G +D I +WDI
Sbjct: 338 NILASGSKDCKIALWDI 354
>ZFIN|ZDB-GENE-050320-77 [details] [associations]
symbol:gnb1l "guanine nucleotide binding protein (G
protein), beta polypeptide 1-like" species:7955 "Danio rerio"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-050320-77
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 CTD:54584 HOVERGEN:HBG051745 EMBL:BC090490
IPI:IPI00555398 RefSeq:NP_001013526.1 UniGene:Dr.81918
ProteinModelPortal:Q5BLC9 STRING:Q5BLC9 DNASU:541381 GeneID:541381
KEGG:dre:541381 InParanoid:Q5BLC9 NextBio:20879193 Uniprot:Q5BLC9
Length = 323
Score = 155 (59.6 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 46/153 (30%), Positives = 71/153 (46%)
Query: 6 PPPDPVAVLRGHRASVTDV---CFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAA 62
PPPDP+ +LRG ASV + C P+L++G+ G + +W+ R H A
Sbjct: 4 PPPDPLYILRGSGASVNALHFCCDGDGPPLLYSGSGKGAVHVWNLSTRRAERVLESH-AG 62
Query: 63 HGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEP 122
+ ++ + T + + +ISQGRD V WD+ G + SL T S FC+ SL+
Sbjct: 63 NSVIWLNTFNN-SRSCLISQGRDMRVCVWDLSEGRSAVTDSL--HTGSVGFCQCSLLGSR 119
Query: 123 YANAKQANEPKDCYEREVGETVDTDSLCDSKDD 155
+ A+ + E V E +C K D
Sbjct: 120 LGSTLLAHPTQHMEEVSVVEMSSWTQVCSLKPD 152
Score = 89 (36.4 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 20/50 (40%), Positives = 32/50 (64%)
Query: 205 GMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEP 254
GM M+++ + G V + AGYEDGS+++WD+ + P + +KVH EP
Sbjct: 156 GMLMSMKMW--QADSGPV-LCAGYEDGSVVLWDVSHRR-PFSLLKVHPEP 201
>UNIPROTKB|F1NF00 [details] [associations]
symbol:GNB1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0035176 "social
behavior" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 OMA:HEEPVMD
GeneTree:ENSGT00390000018606 EMBL:AADN02034786 IPI:IPI00587443
Ensembl:ENSGALT00000002979 Uniprot:F1NF00
Length = 328
Score = 176 (67.0 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 64/223 (28%), Positives = 100/223 (44%)
Query: 6 PPPDPVAVLRGHRASVTDVCF-----HQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHS 60
PPPDP VLRG A+V + F P+LF+G+ G + +W+ HR ++
Sbjct: 4 PPPDPHFVLRGTGAAVHALHFSCGGGEPDIPVLFSGSENGFIHVWNLKTHRVDAAL---- 59
Query: 61 AAHGIVSVATGPSI-GLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLV 119
HG SV ++ G +++SQGRD + WD+ G S S + T + FC+ SL+
Sbjct: 60 DGHGRKSVCGLKTMDGKERLLSQGRDQRICLWDLAEGRTSVTDS--VFTENVGFCRCSLL 117
Query: 120 KEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAE--------------GPKYMA 165
K A K E +V E S+C K +V A+ G +
Sbjct: 118 KVAEGRWLMATAAKALEEVQVLELPSKTSVCTLKPEVGAKLGMPMCLKLWQGSCGSQPSL 177
Query: 166 VAGEQLSEVEIWDLNTAERCTRL--HQNSCGGSPNFSSKGRGM 206
+AG + V +W+L+T + ++L HQ S K +G+
Sbjct: 178 LAGYEDGSVLLWNLSTGKVLSQLICHQEPVMSLDFDSEKAKGI 220
>MGI|MGI:1338057 [details] [associations]
symbol:Gnb1l "guanine nucleotide binding protein (G
protein), beta polypeptide 1-like" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0035176 "social behavior"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1338057 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0035176 CTD:54584
HOGENOM:HOG000007056 HOVERGEN:HBG051745 OMA:HEEPVMD
OrthoDB:EOG4GF3FM EMBL:AF301595 EMBL:AK010489 EMBL:AK016952
EMBL:BC024635 EMBL:BC037676 IPI:IPI00221803 IPI:IPI00308210
RefSeq:NP_001075151.1 RefSeq:NP_075609.2 UniGene:Mm.236139
ProteinModelPortal:Q9EQ15 SMR:Q9EQ15 STRING:Q9EQ15
PhosphoSite:Q9EQ15 PRIDE:Q9EQ15 Ensembl:ENSMUST00000090086
Ensembl:ENSMUST00000115600 Ensembl:ENSMUST00000167778 GeneID:13972
KEGG:mmu:13972 GeneTree:ENSGT00390000018606 NextBio:284846
Bgee:Q9EQ15 Genevestigator:Q9EQ15 GermOnline:ENSMUSG00000000884
Uniprot:Q9EQ15
Length = 326
Score = 164 (62.8 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 61/223 (27%), Positives = 105/223 (47%)
Query: 5 PPPPDPVAVLRGHRASVTDVCF---HQT--KPILFAGTTGGELRIWDTVQHRTVSSSWVH 59
PPPP P VLRG +++V + F Q P+LF+G+ G + IW R V++ H
Sbjct: 6 PPPPGPRFVLRGTQSAVNTLHFCPPSQAAGNPLLFSGSQNGLVHIWSLQTRRIVTTLNGH 65
Query: 60 SAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLV 119
G++ + T P G ++++SQGRD + WD+E G + S ++ +S FC+ S++
Sbjct: 66 GG-QGVIWLKTLPQ-G-HQLLSQGRDLRLCLWDLEEGRNTIMDS--VQLDSVGFCRGSIL 120
Query: 120 KEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAE-G-P------------KYMA 165
A K E ++ E S+C K + A G P + +
Sbjct: 121 VRGQQCWMLAVPGKGSDEVQILEMPSKTSVCTLKPEADARPGMPMCLGLWQTNSSLRPLL 180
Query: 166 VAGEQLSEVEIWDLNTAERCTRL--HQNSCGGSPNFSSKGRGM 206
+AG + V +WD++ + C+++ H+ G S K +G+
Sbjct: 181 LAGYEDGSVTLWDISERKVCSQITCHEEPVMGLDFDSQKAKGI 223
>RGD|1594165 [details] [associations]
symbol:Gnb1l "guanine nucleotide binding protein (G protein),
beta polypeptide 1-like" species:10116 "Rattus norvegicus"
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0035176 "social behavior"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1594165 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 CTD:54584 OMA:HEEPVMD
GeneTree:ENSGT00390000018606 IPI:IPI00959938 RefSeq:XP_001057185.3
RefSeq:XP_002724806.2 ProteinModelPortal:D4A2F0
Ensembl:ENSRNOT00000002596 GeneID:680266 KEGG:rno:680266
ArrayExpress:D4A2F0 Uniprot:D4A2F0
Length = 326
Score = 162 (62.1 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 59/223 (26%), Positives = 101/223 (45%)
Query: 5 PPPPDPVAVLRGHRASVTDVCFHQT-----KPILFAGTTGGELRIWDTVQHRTVSSSWVH 59
PPPP P VLRG +++V + F P+LF+G+ G + IW R V++ H
Sbjct: 6 PPPPSPRFVLRGTQSAVNTLHFCPAPGAAENPLLFSGSQNGLVHIWSLQTRRIVATLNGH 65
Query: 60 SAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLV 119
G+ + T P G +++SQGRD + WD+ G + S ++ +S FCK S++
Sbjct: 66 GG-QGVTWLKTLPQ-G-QQLLSQGRDPRLCLWDLAEGRNTVMDS--VQLDSVGFCKSSIL 120
Query: 120 KEPYANAKQANEPKDCYEREVGETVDTDSLC------DSKDDVPA--------EGPKYMA 165
A K E ++ E S+C D+K +P + +
Sbjct: 121 VRGQLCWMLAVPGKGSDEVQILEMPSKTSVCTLKPEADAKPGMPMCLGLWQTNSSLRPLL 180
Query: 166 VAGEQLSEVEIWDLNTAERCTRL--HQNSCGGSPNFSSKGRGM 206
+AG + V +WD++ + C+++ H+ G S K +G+
Sbjct: 181 LAGYEDGSVTLWDVSERKVCSQITCHEEPVMGLDFDSQKAKGV 223
>UNIPROTKB|Q9BYB4 [details] [associations]
symbol:GNB1L "Guanine nucleotide-binding protein subunit
beta-like protein 1" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0035176 "social behavior"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=NAS] [GO:0035556 "intracellular signal transduction"
evidence=NAS] [GO:0009898 "internal side of plasma membrane"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319
GO:GO:0007186 GO:GO:0035176 GO:GO:0009898 UniGene:Hs.105642
EMBL:AF238328 EMBL:AF301895 EMBL:AY007378 EMBL:AB049212
EMBL:AB051432 EMBL:CR456496 EMBL:BC012060 IPI:IPI00107339
IPI:IPI00218734 RefSeq:NP_443730.1 ProteinModelPortal:Q9BYB4
SMR:Q9BYB4 IntAct:Q9BYB4 STRING:Q9BYB4 PhosphoSite:Q9BYB4
DMDM:27151507 PaxDb:Q9BYB4 PeptideAtlas:Q9BYB4 PRIDE:Q9BYB4
DNASU:54584 Ensembl:ENST00000329517 Ensembl:ENST00000403325
Ensembl:ENST00000405009 GeneID:54584 KEGG:hsa:54584 UCSC:uc002zqf.1
CTD:54584 GeneCards:GC22M019770 HGNC:HGNC:4397 HPA:HPA034627
HPA:HPA034628 MIM:610778 neXtProt:NX_Q9BYB4 PharmGKB:PA28777
HOGENOM:HOG000007056 HOVERGEN:HBG051745 InParanoid:Q9BYB4
OMA:HEEPVMD OrthoDB:EOG4GF3FM GenomeRNAi:54584 NextBio:57105
ArrayExpress:Q9BYB4 Bgee:Q9BYB4 CleanEx:HS_GNB1L
Genevestigator:Q9BYB4 GermOnline:ENSG00000185838 Uniprot:Q9BYB4
Length = 327
Score = 154 (59.3 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 60/223 (26%), Positives = 103/223 (46%)
Query: 5 PPPPDPVAVLRGHRASVTDVCF-----HQTKPILFAGTTGGELRIWDTVQHRTVSSSWVH 59
PPPPDP VLRG ++ V + F Q +P+LF+G+ G + IW R V++ H
Sbjct: 7 PPPPDPQFVLRGTQSPVHALHFCEGAQAQGRPLLFSGSQSGLVHIWSLQTRRAVTTLDGH 66
Query: 60 SAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLV 119
+ + T P G +++SQGRD + WD+ G + S+ ++ S FC+ S++
Sbjct: 67 GG-QCVTWLQTLPQ-G-RQLLSQGRDLKLCLWDLAEGRSAVVDSVCLE--SVGFCRSSIL 121
Query: 120 KEPYANAKQANEPKDCYEREVGETVDTDSLC------DSKDDVP-------AE-GPKYMA 165
A + E ++ E S+C D+K +P A+ + +
Sbjct: 122 AGGQPRWTLAVPGRGSDEVQILEMPSKTSVCALKPKADAKLGMPMCLRLWQADCSSRPLL 181
Query: 166 VAGEQLSEVEIWDLNTAERCTRL--HQNSCGGSPNFSSKGRGM 206
+AG + V +WD++ + C+R+ H+ S K RG+
Sbjct: 182 LAGYEDGSVVLWDVSEQKVCSRIACHEEPVMDLDFDSQKARGI 224
>SGD|S000004951 [details] [associations]
symbol:LST8 "Protein required for the transport of Gap1p to
the cell surface" species:4932 "Saccharomyces cerevisiae"
[GO:0030950 "establishment or maintenance of actin cytoskeleton
polarity" evidence=IMP] [GO:0030295 "protein kinase activator
activity" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005773 "vacuole" evidence=IEA] [GO:0031234 "extrinsic to
internal side of plasma membrane" evidence=IDA] [GO:0001558
"regulation of cell growth" evidence=IPI] [GO:0005774 "vacuolar
membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IMP] [GO:0010008 "endosome membrane" evidence=IDA]
[GO:0000139 "Golgi membrane" evidence=IDA] [GO:0031505 "fungal-type
cell wall organization" evidence=IMP] [GO:0031929 "TOR signaling
cascade" evidence=IC;IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031930
"mitochondria-nucleus signaling pathway" evidence=IMP] [GO:0031932
"TORC2 complex" evidence=IPI] [GO:0031931 "TORC1 complex"
evidence=IPI] [GO:0006810 "transport" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000004951 GO:GO:0005774 GO:GO:0000139 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0001558
GO:GO:0031929 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BK006947 GO:GO:0030295 GO:GO:0010008
GO:GO:0031930 GO:GO:0031505 KO:K07034 GO:GO:0031931 GO:GO:0030950
RefSeq:NP_014399.3 GeneID:855736 KEGG:sce:YNR002C GO:GO:0031932
GO:GO:0031234 EMBL:X77114 RefSeq:NP_014392.3 GeneID:855726
KEGG:sce:YNL006W KO:K08266 GeneTree:ENSGT00390000014795
HOGENOM:HOG000208395 OMA:NNKGNCY EMBL:Z71282 PIR:S45461
ProteinModelPortal:P41318 SMR:P41318 DIP:DIP-5318N IntAct:P41318
MINT:MINT-562844 STRING:P41318 PaxDb:P41318 PeptideAtlas:P41318
EnsemblFungi:YNL006W CYGD:YNL006w OrthoDB:EOG4GF6PT NextBio:980099
Genevestigator:P41318 GermOnline:YNL006W Uniprot:P41318
Length = 303
Score = 141 (54.7 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 42/146 (28%), Positives = 69/146 (47%)
Query: 4 RPPPPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAH 63
R P+PVA GHR +VT V F Q + + G +++WD V+ ++ ++ H+A
Sbjct: 61 RTTNPNPVASFEGHRGNVTSVSFQQDNRWMVTSSEDGTIKVWD-VRSPSIPRNYKHNAP- 118
Query: 64 GIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPY 123
+ V P+ G ++IS RDG ++ WD+ G LT + ++ LS+ +
Sbjct: 119 -VNEVVIHPNQG--ELISCDRDGNIRIWDL--GENQCTHQLTPEDDT-SLQSLSMASDGS 172
Query: 124 ANAKQANEPKDCYEREVGETVDTDSL 149
A AN +CY E+ D L
Sbjct: 173 MLAA-ANTKGNCYVWEMPNHTDASHL 197
Score = 38 (18.4 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 163 YMAVAGEQLSEVEIWDLNTAE 183
Y+ A V +WDL+T E
Sbjct: 264 YLVTASSD-HYVRLWDLSTRE 283
>UNIPROTKB|F1RK57 [details] [associations]
symbol:GNB1L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035176 "social behavior" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035176 CTD:54584
GeneTree:ENSGT00390000018606 EMBL:CT737290 RefSeq:NP_001230384.1
UniGene:Ssc.11798 UniGene:Ssc.79225 ProteinModelPortal:F1RK57
Ensembl:ENSSSCT00000011091 GeneID:100153889 KEGG:ssc:100153889
OMA:WDGRIRI Uniprot:F1RK57
Length = 293
Score = 113 (44.8 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 39/125 (31%), Positives = 64/125 (51%)
Query: 1 MSKRP-PPPDPVAVLRGHRASVTDVCF-----HQTKPILFAGTTGGELRIWDTVQHRTVS 54
M+ P PPPDP VLRG +++V + F Q P+L +G+ G + IW R V+
Sbjct: 1 MADLPLPPPDPQFVLRGTQSAVHALHFCGGAQGQGCPLLLSGSLRGLVHIWSLQTRRVVA 60
Query: 55 SSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFC 114
+ H + + T P G +++SQGRD + WD+ G + S+ ++ S FC
Sbjct: 61 TLDGHGG-QCVTWLQTLPQ-G-PQLLSQGRDLKLCLWDLAEGRNTVVDSVHLE--SVGFC 115
Query: 115 KLSLV 119
+ S++
Sbjct: 116 RGSIL 120
Score = 63 (27.2 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 16/57 (28%), Positives = 27/57 (47%)
Query: 152 SKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRL--HQNSCGGSPNFSSKGRGM 206
S D P+ + +AG + V +WD++ + C+R+ H G S K RG+
Sbjct: 134 SGSDEANSSPRPLLLAGYEDGSVALWDVSEQKVCSRIACHTEPVMGLDVDSQKARGV 190
>DICTYBASE|DDB_G0277471 [details] [associations]
symbol:DDB_G0277471 "putative proteasomal
ATPase-associated factor" species:44689 "Dictyostelium discoideum"
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0277471
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000020 GO:GO:0000502 KO:K11887
RefSeq:XP_642666.1 ProteinModelPortal:Q8MYE8
EnsemblProtists:DDB0169267 GeneID:8621083 KEGG:ddi:DDB_G0277471
OMA:IHHIKAN ProtClustDB:CLSZ2729134 Uniprot:Q8MYE8
Length = 425
Score = 126 (49.4 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 39/129 (30%), Positives = 59/129 (45%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L GH V F + ++ +G++ L+IWD ++ S+ H GI S A+
Sbjct: 141 LDGHVGDVDLAMFFPSGRVILSGSSDSRLKIWDAIEGTCASTLVGHIG--GITS-ASLVD 197
Query: 74 IGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKE-PYANAKQANEP 132
G N ++S RDGT K WDI + SN + + + F SL+ P +N+
Sbjct: 198 RGRN-LVSCSRDGTSKLWDIPTSSIISNLTKLSRPINDSFIASSLLDSIPTTTTTNSNDN 256
Query: 133 KDCYEREVG 141
EREVG
Sbjct: 257 NKVDEREVG 265
Score = 50 (22.7 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 224 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEP 254
++ G +GSI WD RN P ++ P
Sbjct: 319 IIGGDHNGSIYFWDKRNLNSPFCRLQFTNSP 349
>UNIPROTKB|A4RJA0 [details] [associations]
symbol:asa1 "ASTRA-associated protein 1" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0016568 EMBL:CM001232 RefSeq:XP_003714908.1
ProteinModelPortal:A4RJA0 EnsemblFungi:MGG_01888T0 GeneID:2679563
KEGG:mgr:MGG_01888 OrthoDB:EOG46DQBT Uniprot:A4RJA0
Length = 469
Score = 98 (39.6 bits), Expect = 4.6e-05, Sum P(3) = 4.6e-05
Identities = 26/87 (29%), Positives = 40/87 (45%)
Query: 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIV 66
P P ++LRGH+A V F + L G G + +WD R + W AH V
Sbjct: 12 PAHPRSILRGHKAQVHAAAFVRNNERLVTGDADGFVVVWDLTIMRP-RAVW---RAHDDV 67
Query: 67 SVATGPSIGLNKVISQGRDGTVKCWDI 93
+ G G +++I+ GRD + W +
Sbjct: 68 LLGIG-GWGTDRLITHGRDNKLIVWQL 93
Score = 63 (27.2 bits), Expect = 4.6e-05, Sum P(3) = 4.6e-05
Identities = 36/125 (28%), Positives = 56/125 (44%)
Query: 117 SLVKEPYANAKQANEPKD--CYEREVGETVD--TDSLCD-SKDDVPAEGPKYMAVAGEQL 171
SL K + + PK Y E+ T++ T SLC+ S D + + +AV
Sbjct: 100 SLAKTLPVDPAAEDRPKPWLLYMLEIS-TMNFCTFSLCEMSSDPLSEDREALIAVPNTLS 158
Query: 172 SE-VEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED 230
SE ++I+ L + +R H G S GM MA++ + + G+ V GYE+
Sbjct: 159 SEAIDIFHLPSQKR---EHTIRLGQS-------EGMVMALELF---RVDGYFTVAVGYEN 205
Query: 231 GSILV 235
G LV
Sbjct: 206 GVALV 210
Score = 40 (19.1 bits), Expect = 4.6e-05, Sum P(3) = 4.6e-05
Identities = 6/13 (46%), Positives = 10/13 (76%)
Query: 226 AGYEDGSILVWDI 238
AG +DG + +W+I
Sbjct: 456 AGSKDGKVSLWEI 468
>UNIPROTKB|F1MBU4 [details] [associations]
symbol:GNB1L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0035176 "social behavior" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035176 OMA:HEEPVMD
GeneTree:ENSGT00390000018606 EMBL:DAAA02045774 EMBL:DAAA02045775
EMBL:DAAA02045776 IPI:IPI00710706 ProteinModelPortal:F1MBU4
Ensembl:ENSBTAT00000029367 Uniprot:F1MBU4
Length = 321
Score = 118 (46.6 bits), Expect = 0.00012, P = 0.00012
Identities = 53/209 (25%), Positives = 97/209 (46%)
Query: 6 PPPDPVAVLRGHRASVTDVCF-H--QTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAA 62
P P+P VLRG R++V + F H Q P+L +G+ G + +W R +++ H
Sbjct: 4 PVPNPQFVLRGARSAVHALHFCHGAQGHPLLLSGSLRGLVHVWSLQTRRPLAALDGHGG- 62
Query: 63 HGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEP 122
+ + T P G +++SQGRD + WD+ G + ++ ++ S FC+ S++ E
Sbjct: 63 QCVTWLHTLPQ-G-PQLLSQGRDLQLCVWDLAEGRNAVVDAVHLE--SVGFCRASVLAEG 118
Query: 123 YANAKQANEPKDCYEREVGETVDTDSLCDSKDD------VP-------AEG-PKYMAVAG 168
A + E +V E S+ K + +P AE P+ + +AG
Sbjct: 119 PQRWMLAVPGRGSDEVQVLELPSKTSVSCLKPEAGARLGMPMCLQLWQAESSPRPLLLAG 178
Query: 169 EQLSEVEIWDLNTAERCTRLHQNSCGGSP 197
+ + +WD++ + C+R+ +C P
Sbjct: 179 YEDGSLALWDVSARKVCSRV---ACHSEP 204
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 116 (45.9 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 26/83 (31%), Positives = 45/83 (54%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L+GH SV D+ F QT +L + + +++WD + + +H H + SVA P+
Sbjct: 146 LKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRT--MHGHDHNVSSVAIMPN 203
Query: 74 IGLNKVISQGRDGTVKCWDIENG 96
G + ++S RD T+K W++ G
Sbjct: 204 -G-DHIVSASRDKTMKMWEVATG 224
Score = 42 (19.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 224 VLAGYEDGSILVWDIRNPGIPLTAMKVH 251
+L+G D +I +WDI + G+ L + H
Sbjct: 311 LLSGSRDKTIKMWDI-STGMCLMTLVGH 337
>MGI|MGI:2384313 [details] [associations]
symbol:Rrp9 "RRP9, small subunit (SSU) processome component,
homolog (yeast)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2384313 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003723 GO:GO:0030529
GO:GO:0006364 GeneTree:ENSGT00550000075093 HOGENOM:HOG000188732
KO:K14793 CTD:9136 HOVERGEN:HBG079296 OMA:AAKDCTI OrthoDB:EOG4XKV6X
EMBL:AF368232 EMBL:AF368234 EMBL:AK076113 EMBL:BC014703
IPI:IPI00128256 RefSeq:NP_663595.1 UniGene:Mm.239997
ProteinModelPortal:Q91WM3 SMR:Q91WM3 STRING:Q91WM3
PhosphoSite:Q91WM3 PaxDb:Q91WM3 PRIDE:Q91WM3
Ensembl:ENSMUST00000047721 GeneID:27966 KEGG:mmu:27966
UCSC:uc009rkb.1 InParanoid:Q91WM3 NextBio:306456 Bgee:Q91WM3
Genevestigator:Q91WM3 GermOnline:ENSMUSG00000041506 Uniprot:Q91WM3
Length = 475
Score = 79 (32.9 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 19/78 (24%), Positives = 38/78 (48%)
Query: 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIG 75
GHR +V+ + F + L++ + +++W+ ++ V + + H A + +
Sbjct: 239 GHRDAVSGLAFRKGTHQLYSTSHDRSVKVWNAAENSYVETLFGHQDAVAALDALSRECC- 297
Query: 76 LNKVISQGRDGTVKCWDI 93
V + GRDGTV+ W I
Sbjct: 298 ---VTAGGRDGTVRVWKI 312
Score = 67 (28.6 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 223 NVLAGYEDGSILVWDI--RNP-GIPLTAMKVHLEPGLECSMW 261
++++G +DGS+ +W + + P + A +H EPGLE W
Sbjct: 337 HMVSGADDGSVALWGLSKKRPLALQREAHGLHGEPGLEQPFW 378
Score = 52 (23.4 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 6 PPPDPVAVLRGHRASVT 22
P P + VLRGH+ S+T
Sbjct: 134 PAPTDIRVLRGHQLSIT 150
>RGD|1307881 [details] [associations]
symbol:Rrp9 "ribosomal RNA processing 9, small subunit (SSU)
processome component, homolog (yeast)" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307881 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH473954
GeneTree:ENSGT00550000075093 HOGENOM:HOG000188732 KO:K14793
CTD:9136 HOVERGEN:HBG079296 OrthoDB:EOG4XKV6X EMBL:BC158778
IPI:IPI00869600 RefSeq:NP_001102248.1 UniGene:Rn.11840
STRING:B0BND5 Ensembl:ENSRNOT00000017469 GeneID:363134
KEGG:rno:363134 NextBio:682561 Genevestigator:B0BND5 Uniprot:B0BND5
Length = 478
Score = 79 (32.9 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 19/78 (24%), Positives = 38/78 (48%)
Query: 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIG 75
GHR +V+ + F + L++ + +++W+ ++ V + + H A + +
Sbjct: 242 GHRDAVSGLAFRRGTHQLYSTSHDRSVKVWNAAENSYVETLFGHQDAVAALDALSRECC- 300
Query: 76 LNKVISQGRDGTVKCWDI 93
V + GRDGTV+ W I
Sbjct: 301 ---VTAGGRDGTVRVWKI 315
Score = 67 (28.6 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 223 NVLAGYEDGSILVWDI--RNP-GIPLTAMKVHLEPGLECSMW 261
++++G +DGS+ +W + + P + A +H EPGLE W
Sbjct: 340 HMVSGADDGSVALWGLSKKRPLALQREAHGLHGEPGLEQPFW 381
Score = 52 (23.4 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 6 PPPDPVAVLRGHRASVT 22
P P + VLRGH+ S+T
Sbjct: 137 PAPTDIRVLRGHQLSIT 153
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 116 (45.9 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 25/83 (30%), Positives = 45/83 (54%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L+GH SV D+ F T +L + + +++WD + + +H H + SVA P+
Sbjct: 146 LKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRT--MHGHDHNVSSVAIMPN 203
Query: 74 IGLNKVISQGRDGTVKCWDIENG 96
G + ++S RD T+K W+++ G
Sbjct: 204 -G-DHIVSASRDKTIKMWEVQTG 224
Score = 39 (18.8 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 224 VLAGYEDGSILVWDIRN 240
+L+ +D ++ VWD +N
Sbjct: 353 ILSCADDKTLRVWDFKN 369
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 116 (45.9 bits), Expect = 0.00025, P = 0.00025
Identities = 56/239 (23%), Positives = 100/239 (41%)
Query: 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSA-AHGIVS 67
D A L+GH +V ++ ++ +LF+ +T + +WD+ V H++ +
Sbjct: 101 DNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYP 160
Query: 68 VATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSL--VKEPYAN 125
GP + V + DGTVK WDI ++ N+Y ++ + +
Sbjct: 161 ARRGPQL----VCTGSDDGTVKLWDIRK-----KAAIQTFQNTYQVLAVTFNDTSDQIIS 211
Query: 126 AKQANEPK--DCYEREVGETV--DTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNT 181
N+ K D + ++ T+ DS+ + +EG ++ A + + V +WD+
Sbjct: 212 GGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS--LSSEGSYLLSNAMD--NTVRVWDVRP 267
Query: 182 ---AERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 237
ERC R+ Q G NF K C ++ P S+ + AG D + VWD
Sbjct: 268 FAPKERCVRIFQ---GNVHNFE-KNLLRC----SWSPDGSK----IAAGSADRFVYVWD 314
>CGD|CAL0005182 [details] [associations]
symbol:orf19.5413 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0000974 "Prp19 complex" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005182 GO:GO:0005737 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
GO:GO:0007049 EMBL:AACQ01000051 EMBL:AACQ01000050 KO:K12862
RefSeq:XP_717691.1 RefSeq:XP_717785.1 ProteinModelPortal:Q5A7Q3
STRING:Q5A7Q3 GeneID:3640515 GeneID:3640625 KEGG:cal:CaO19.12868
KEGG:cal:CaO19.5413 Uniprot:Q5A7Q3
Length = 389
Score = 111 (44.1 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 27/87 (31%), Positives = 42/87 (48%)
Query: 12 AVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSA-AH--GIVSV 68
AVL GH + +C + P LF+G LR WD + + + + S H G+ S+
Sbjct: 122 AVLTGHVLGIRSLCISKRHPYLFSGGEDKSLRCWDLERSNSDAGCQIRSYHGHLGGVYSI 181
Query: 69 ATGPSIGLNKVISQGRDGTVKCWDIEN 95
P L+ + S G+D V+ WDI +
Sbjct: 182 GLHPE--LDVLFSGGKDCVVRVWDIRS 206
Score = 42 (19.8 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 224 VLAGYEDGSILVWDIR 239
V+ DG+I +WD+R
Sbjct: 232 VITSSMDGTIRLWDLR 247
>UNIPROTKB|Q5A7Q3 [details] [associations]
symbol:PRP46 "Pre-mRNA-splicing factor PRP46"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005182 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0005681 GO:GO:0007049 EMBL:AACQ01000051
EMBL:AACQ01000050 KO:K12862 RefSeq:XP_717691.1 RefSeq:XP_717785.1
ProteinModelPortal:Q5A7Q3 STRING:Q5A7Q3 GeneID:3640515
GeneID:3640625 KEGG:cal:CaO19.12868 KEGG:cal:CaO19.5413
Uniprot:Q5A7Q3
Length = 389
Score = 111 (44.1 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 27/87 (31%), Positives = 42/87 (48%)
Query: 12 AVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSA-AH--GIVSV 68
AVL GH + +C + P LF+G LR WD + + + + S H G+ S+
Sbjct: 122 AVLTGHVLGIRSLCISKRHPYLFSGGEDKSLRCWDLERSNSDAGCQIRSYHGHLGGVYSI 181
Query: 69 ATGPSIGLNKVISQGRDGTVKCWDIEN 95
P L+ + S G+D V+ WDI +
Sbjct: 182 GLHPE--LDVLFSGGKDCVVRVWDIRS 206
Score = 42 (19.8 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 224 VLAGYEDGSILVWDIR 239
V+ DG+I +WD+R
Sbjct: 232 VITSSMDGTIRLWDLR 247
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 112 (44.5 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 24/83 (28%), Positives = 45/83 (54%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L+GH SV D+ F + +L + + +++WD + + +H H + SVA P+
Sbjct: 81 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT--MHGHDHNVSSVAIMPN 138
Query: 74 IGLNKVISQGRDGTVKCWDIENG 96
G + ++S RD T+K W+++ G
Sbjct: 139 -G-DHIVSASRDKTIKMWEVQTG 159
Score = 38 (18.4 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 224 VLAGYEDGSILVWDIRN 240
+L+ +D ++ VWD +N
Sbjct: 288 ILSCADDKTLRVWDYKN 304
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 113 (44.8 bits), Expect = 0.00055, P = 0.00055
Identities = 55/239 (23%), Positives = 100/239 (41%)
Query: 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSA-AHGIVS 67
D A L+GH +V ++ ++ +LF+ +T + +WD+ V H++ +
Sbjct: 100 DNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYP 159
Query: 68 VATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSL--VKEPYAN 125
GP + V + DGTVK WDI ++ N+Y ++ + +
Sbjct: 160 ARRGPQL----VCTGSDDGTVKLWDIRK-----KAAIQTFQNTYQVLAVTFNDTSDQIIS 210
Query: 126 AKQANEPK--DCYEREVGETV--DTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNT 181
N+ K D + ++ T+ DS+ + +EG ++ A + + V +WD+
Sbjct: 211 GGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS--LSSEGSYLLSNAMD--NTVRVWDVRP 266
Query: 182 ---AERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 237
ERC ++ Q G NF K C ++ P S+ + AG D + VWD
Sbjct: 267 FAPKERCVKIFQ---GNVHNFE-KNLLRC----SWSPDGSK----IAAGSADRFVYVWD 313
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 113 (44.8 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 25/83 (30%), Positives = 44/83 (53%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L+GH SV D+ F T +L + + +++WD + + +H H + SVA P+
Sbjct: 146 LKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRT--MHGHDHNVSSVAIMPN 203
Query: 74 IGLNKVISQGRDGTVKCWDIENG 96
G + ++S RD T+K W++ G
Sbjct: 204 -G-DHIVSASRDKTIKMWEVATG 224
Score = 39 (18.8 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 224 VLAGYEDGSILVWDIRNPGIPLTAMKVH 251
+L+G D +I +WD+ + G+ L + H
Sbjct: 311 LLSGSRDKTIKMWDV-SIGMCLMTLVGH 337
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 113 (44.8 bits), Expect = 0.00056, P = 0.00056
Identities = 55/239 (23%), Positives = 100/239 (41%)
Query: 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSA-AHGIVS 67
D A L+GH +V ++ ++ +LF+ +T + +WD+ V H++ +
Sbjct: 101 DNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYP 160
Query: 68 VATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSL--VKEPYAN 125
GP + V + DGTVK WDI ++ N+Y ++ + +
Sbjct: 161 ARRGPQL----VCTGSDDGTVKLWDIRK-----KAAIQTFQNTYQVLAVTFNDTSDQIIS 211
Query: 126 AKQANEPK--DCYEREVGETV--DTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNT 181
N+ K D + ++ T+ DS+ + +EG ++ A + + V +WD+
Sbjct: 212 GGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS--LSSEGSYLLSNAMD--NTVRVWDVRP 267
Query: 182 ---AERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 237
ERC ++ Q G NF K C ++ P S+ + AG D + VWD
Sbjct: 268 FAPKERCVKIFQ---GNVHNFE-KNLLRC----SWSPDGSK----IAAGSADRFVYVWD 314
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 113 (44.8 bits), Expect = 0.00056, P = 0.00056
Identities = 55/239 (23%), Positives = 100/239 (41%)
Query: 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSA-AHGIVS 67
D A L+GH +V ++ ++ +LF+ +T + +WD+ V H++ +
Sbjct: 101 DNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYP 160
Query: 68 VATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSL--VKEPYAN 125
GP + V + DGTVK WDI ++ N+Y ++ + +
Sbjct: 161 ARRGPQL----VCTGSDDGTVKLWDIRK-----KAAIQTFQNTYQVLAVTFNDTSDQIIS 211
Query: 126 AKQANEPK--DCYEREVGETV--DTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNT 181
N+ K D + ++ T+ DS+ + +EG ++ A + + V +WD+
Sbjct: 212 GGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS--LSSEGSYLLSNAMD--NTVRVWDVRP 267
Query: 182 ---AERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 237
ERC ++ Q G NF K C ++ P S+ + AG D + VWD
Sbjct: 268 FAPKERCVKIFQ---GNVHNFE-KNLLRC----SWSPDGSK----IAAGSADRFVYVWD 314
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 108 (43.1 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 27/83 (32%), Positives = 43/83 (51%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L+GH SV DV F +L + + +++WD Q + +H H + SVA P+
Sbjct: 146 LKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQSYECIKT-MHGHDHNVSSVAFVPA 204
Query: 74 IGLNKVISQGRDGTVKCWDIENG 96
G + V+S RD T+K W++ G
Sbjct: 205 -G-DYVLSASRDRTIKMWEVATG 225
Score = 44 (20.5 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 224 VLAGYEDGSILVWDIRN 240
+++ +D +I VWD+RN
Sbjct: 354 LVSASDDKTIRVWDLRN 370
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 113 (44.8 bits), Expect = 0.00069, P = 0.00069
Identities = 55/239 (23%), Positives = 100/239 (41%)
Query: 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSA-AHGIVS 67
D A L+GH +V ++ ++ +LF+ +T + +WD+ V H++ +
Sbjct: 100 DNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYP 159
Query: 68 VATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSL--VKEPYAN 125
GP + V + DGTVK WDI ++ N+Y ++ + +
Sbjct: 160 ARRGPQL----VCTGSDDGTVKLWDIRK-----KAAIQTFQNTYQVLAVTFNDTSDQIIS 210
Query: 126 AKQANEPK--DCYEREVGETV--DTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNT 181
N+ K D + ++ T+ DS+ + +EG ++ A + + V +WD+
Sbjct: 211 GGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS--LSSEGSYLLSNAMD--NTVRVWDVRP 266
Query: 182 ---AERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 237
ERC ++ Q G NF K C ++ P S+ + AG D + VWD
Sbjct: 267 FAPKERCVKIFQ---GNVHNFE-KNLLRC----SWSPDGSK----IAAGSADRFVYVWD 313
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 112 (44.5 bits), Expect = 0.00073, P = 0.00073
Identities = 56/237 (23%), Positives = 98/237 (41%)
Query: 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSA-AHGIVS 67
D A L+GH +V ++ ++ +LF+ +T + +WD+ V H++ +
Sbjct: 101 DNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYP 160
Query: 68 VATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAK 127
GP + V + DGTVK WDI T + + F S + +
Sbjct: 161 ARRGPQL----VCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDTS---DQIISGG 213
Query: 128 QANEPK--DCYEREVGETV--DTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNT-- 181
N+ K D + ++ T+ DS+ + +EG ++ A + + V +WD+
Sbjct: 214 IDNDIKVWDLRQNKLTYTMRGHADSVTGLS--LSSEGSYLLSNAMD--NTVRVWDVRPFA 269
Query: 182 -AERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 237
ERC ++ Q G NF K C ++ P S+ + AG D + VWD
Sbjct: 270 PKERCVKIFQ---GNVHNFE-KNLLRC----SWSPDGSK----IAAGSADRFVYVWD 314
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 114 (45.2 bits), Expect = 0.00078, P = 0.00078
Identities = 54/213 (25%), Positives = 92/213 (43%)
Query: 5 PPPPDPVAV-------LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSW 57
PPPP P +V LRGH V+ V F ++ +G G +++W + + +
Sbjct: 156 PPPPKPESVNYRQKFLLRGHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFE 215
Query: 58 VHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLS 117
H A GI +++ P G + S D T++ W++ G ++P+ I ++Y +
Sbjct: 216 GHLA--GISTISWSPD-GAT-IASGSDDKTIRLWNVLTG--KAHPTPFIGHHNYVYAIAF 269
Query: 118 LVKEPYANAKQANEPK---DCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEV 174
K + +E D V +++ S S DV +G + A + L V
Sbjct: 270 SPKGNMLVSGSYDEAVFLWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGL--V 327
Query: 175 EIWDLNTAERCTR--LHQ-NSCGGSPNFSSKGR 204
IWD +T + C R +H+ N S FS G+
Sbjct: 328 RIWDTSTGQ-CLRTLVHEDNPPVSSVKFSPNGK 359
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 112 (44.5 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 24/83 (28%), Positives = 45/83 (54%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L+GH SV D+ F + +L + + +++WD + + +H H + SVA P+
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT--MHGHDHNVSSVAIMPN 203
Query: 74 IGLNKVISQGRDGTVKCWDIENG 96
G + ++S RD T+K W+++ G
Sbjct: 204 -G-DHIVSASRDKTIKMWEVQTG 224
Score = 38 (18.4 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 224 VLAGYEDGSILVWDIRN 240
+L+ +D ++ VWD +N
Sbjct: 353 ILSCADDKTLRVWDYKN 369
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 112 (44.5 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 24/83 (28%), Positives = 45/83 (54%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L+GH SV D+ F + +L + + +++WD + + +H H + SVA P+
Sbjct: 146 LKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRT--MHGHDHNVSSVAIMPN 203
Query: 74 IGLNKVISQGRDGTVKCWDIENG 96
G + ++S RD T+K W+++ G
Sbjct: 204 -G-DHIVSASRDKTIKMWEVQTG 224
Score = 38 (18.4 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 224 VLAGYEDGSILVWDIRN 240
+L+ +D ++ VWD +N
Sbjct: 353 ILSCADDKTLRVWDYKN 369
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 112 (44.5 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 24/83 (28%), Positives = 45/83 (54%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L+GH SV D+ F + +L + + +++WD + + +H H + SVA P+
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT--MHGHDHNVSSVAIMPN 203
Query: 74 IGLNKVISQGRDGTVKCWDIENG 96
G + ++S RD T+K W+++ G
Sbjct: 204 -G-DHIVSASRDKTIKMWEVQTG 224
Score = 38 (18.4 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 224 VLAGYEDGSILVWDIRN 240
+L+ +D ++ VWD +N
Sbjct: 353 ILSCADDKTLRVWDYKN 369
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 112 (44.5 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 24/83 (28%), Positives = 45/83 (54%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L+GH SV D+ F + +L + + +++WD + + +H H + SVA P+
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT--MHGHDHNVSSVAIMPN 203
Query: 74 IGLNKVISQGRDGTVKCWDIENG 96
G + ++S RD T+K W+++ G
Sbjct: 204 -G-DHIVSASRDKTIKMWEVQTG 224
Score = 38 (18.4 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 224 VLAGYEDGSILVWDIRN 240
+L+ +D ++ VWD +N
Sbjct: 353 ILSCADDKTLRVWDYKN 369
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 112 (44.5 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 24/83 (28%), Positives = 45/83 (54%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L+GH SV D+ F + +L + + +++WD + + +H H + SVA P+
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT--MHGHDHNVSSVAIMPN 203
Query: 74 IGLNKVISQGRDGTVKCWDIENG 96
G + ++S RD T+K W+++ G
Sbjct: 204 -G-DHIVSASRDKTIKMWEVQTG 224
Score = 38 (18.4 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 224 VLAGYEDGSILVWDIRN 240
+L+ +D ++ VWD +N
Sbjct: 353 ILSCADDKTLRVWDYKN 369
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 112 (44.5 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 24/83 (28%), Positives = 45/83 (54%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L+GH SV D+ F + +L + + +++WD + + +H H + SVA P+
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT--MHGHDHNVSSVAIMPN 203
Query: 74 IGLNKVISQGRDGTVKCWDIENG 96
G + ++S RD T+K W+++ G
Sbjct: 204 -G-DHIVSASRDKTIKMWEVQTG 224
Score = 38 (18.4 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 224 VLAGYEDGSILVWDIRN 240
+L+ +D ++ VWD +N
Sbjct: 353 ILSCADDKTLRVWDYKN 369
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 112 (44.5 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 24/83 (28%), Positives = 45/83 (54%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L+GH SV D+ F + +L + + +++WD + + +H H + SVA P+
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT--MHGHDHNVSSVAIMPN 203
Query: 74 IGLNKVISQGRDGTVKCWDIENG 96
G + ++S RD T+K W+++ G
Sbjct: 204 -G-DHIVSAARDKTIKMWEVQTG 224
Score = 38 (18.4 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 224 VLAGYEDGSILVWDIRN 240
+L+ +D ++ VWD +N
Sbjct: 353 ILSCADDKTLRVWDYKN 369
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 112 (44.5 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 24/83 (28%), Positives = 45/83 (54%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L+GH SV D+ F + +L + + +++WD + + +H H + SVA P+
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT--MHGHDHNVSSVAIMPN 203
Query: 74 IGLNKVISQGRDGTVKCWDIENG 96
G + ++S RD T+K W+++ G
Sbjct: 204 -G-DHIVSASRDKTIKMWEVQTG 224
Score = 38 (18.4 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 224 VLAGYEDGSILVWDIRN 240
+L+ +D ++ VWD +N
Sbjct: 353 ILSCADDKTLRVWDYKN 369
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 112 (44.5 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 24/83 (28%), Positives = 45/83 (54%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L+GH SV D+ F + +L + + +++WD + + +H H + SVA P+
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT--MHGHDHNVSSVAIMPN 203
Query: 74 IGLNKVISQGRDGTVKCWDIENG 96
G + ++S RD T+K W+++ G
Sbjct: 204 -G-DHIVSASRDKTIKMWEVQTG 224
Score = 38 (18.4 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 224 VLAGYEDGSILVWDIRN 240
+L+ +D ++ VWD +N
Sbjct: 353 ILSCADDKTLRVWDYKN 369
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 112 (44.5 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 24/83 (28%), Positives = 45/83 (54%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L+GH SV D+ F + +L + + +++WD + + +H H + SVA P+
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT--MHGHDHNVSSVAIMPN 203
Query: 74 IGLNKVISQGRDGTVKCWDIENG 96
G + ++S RD T+K W+++ G
Sbjct: 204 -G-DHIVSASRDKTIKMWEVQTG 224
Score = 38 (18.4 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 224 VLAGYEDGSILVWDIRN 240
+L+ +D ++ VWD +N
Sbjct: 353 ILSCADDKTLRVWDYKN 369
>UNIPROTKB|G4MUL1 [details] [associations]
symbol:MGG_07284 "Target-rapamycin complex subunit LST8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0000139 "Golgi
membrane" evidence=ISS] [GO:0001558 "regulation of cell growth"
evidence=ISS] [GO:0006810 "transport" evidence=ISS] [GO:0007165
"signal transduction" evidence=ISS] [GO:0010008 "endosome membrane"
evidence=ISS] [GO:0030295 "protein kinase activator activity"
evidence=ISS] [GO:0030950 "establishment or maintenance of actin
cytoskeleton polarity" evidence=ISS] [GO:0031234 "extrinsic to
internal side of plasma membrane" evidence=ISS] [GO:0031505
"fungal-type cell wall organization" evidence=ISS] [GO:0031930
"mitochondria-nucleus signaling pathway" evidence=ISS] [GO:0031931
"TORC1 complex" evidence=ISS] [GO:0031932 "TORC2 complex"
evidence=ISS] [GO:0045860 "positive regulation of protein kinase
activity" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0000139 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0001558 GO:GO:0031929
GO:GO:0006810 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030295
GO:GO:0010008 GO:GO:0031930 GO:GO:0031505 GO:GO:0031931
GO:GO:0030950 EMBL:CM001232 GO:GO:0031932 GO:GO:0031234 KO:K08266
RefSeq:XP_003715510.1 ProteinModelPortal:G4MUL1
EnsemblFungi:MGG_07284T0 GeneID:2683030 KEGG:mgr:MGG_07284
Uniprot:G4MUL1
Length = 317
Score = 110 (43.8 bits), Expect = 0.00098, P = 0.00098
Identities = 26/93 (27%), Positives = 47/93 (50%)
Query: 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVS 67
P+ + GH +VT V FH + + G ++IW+T + T+ S+ H + +
Sbjct: 65 PNALLTFEGHTGNVTGVAFHCEGKWMVTSSEDGTVKIWET-RTGTIQRSYNHQSP--VND 121
Query: 68 VATGPSIGLNKVISQGRDGTVKCWDIENGGLSS 100
V P+ G ++IS R GT++ WD+ + +S
Sbjct: 122 VVIHPNQG--EIISCDRAGTIRLWDLADNKCTS 152
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.132 0.414 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 270 270 0.00097 114 3 11 22 0.39 34
32 0.40 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 39
No. of states in DFA: 623 (66 KB)
Total size of DFA: 236 KB (2127 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.99u 0.09s 24.08t Elapsed: 00:00:02
Total cpu time: 23.99u 0.09s 24.08t Elapsed: 00:00:02
Start: Tue May 21 03:09:02 2013 End: Tue May 21 03:09:04 2013