Query 024246
Match_columns 270
No_of_seqs 155 out of 700
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 04:55:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024246.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024246hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4h08_A Putative hydrolase; GDS 95.5 0.019 6.5E-07 47.3 5.8 50 196-267 73-122 (200)
2 4hf7_A Putative acylhydrolase; 79.4 0.78 2.7E-05 38.0 2.0 16 112-127 25-40 (209)
3 3hp4_A GDSL-esterase; psychrot 77.1 0.78 2.7E-05 36.5 1.2 49 197-267 66-115 (185)
4 3rjt_A Lipolytic protein G-D-S 71.2 1.6 5.4E-05 35.2 1.7 26 234-263 112-137 (216)
5 1ivn_A Thioesterase I; hydrola 64.9 2 7E-05 34.4 1.1 46 197-264 62-107 (190)
6 3mil_A Isoamyl acetate-hydroly 64.4 2.1 7.1E-05 35.2 1.1 53 196-266 71-123 (240)
7 1yzf_A Lipase/acylhydrolase; s 61.1 2.5 8.6E-05 33.3 1.0 50 196-267 66-115 (195)
8 3p94_A GDSL-like lipase; serin 59.4 3.1 0.00011 33.3 1.3 52 197-267 74-125 (204)
9 2q0q_A ARYL esterase; SGNH hyd 57.4 3.1 0.00011 33.7 1.0 53 198-266 84-141 (216)
10 2hsj_A Putative platelet activ 54.8 4.5 0.00015 32.7 1.5 52 197-268 85-136 (214)
11 3dci_A Arylesterase; SGNH_hydr 53.9 3.8 0.00013 34.1 1.0 33 234-266 122-157 (232)
12 4i8i_A Hypothetical protein; 5 53.2 15 0.00053 32.5 4.9 120 114-266 11-141 (271)
13 3dc7_A Putative uncharacterize 52.8 5 0.00017 33.1 1.5 18 109-126 17-34 (232)
14 1vjg_A Putative lipase from th 51.4 3.8 0.00013 33.5 0.5 54 196-267 87-140 (218)
15 1fxw_F Alpha2, platelet-activa 50.2 6.2 0.00021 32.7 1.7 23 105-127 29-53 (229)
16 3bzw_A Putative lipase; protei 50.2 6.5 0.00022 33.7 1.9 16 111-126 24-39 (274)
17 1es9_A PAF-AH, platelet-activa 47.7 6.7 0.00023 32.4 1.5 16 112-127 37-52 (232)
18 2vpt_A Lipolytic enzyme; ester 45.1 5.8 0.0002 32.5 0.7 13 114-126 6-18 (215)
19 2w9x_A AXE2A, CJCE2B, putative 39.9 11 0.00037 34.2 1.7 28 234-263 266-293 (366)
20 2waa_A Acetyl esterase, xylan 39.5 9.7 0.00033 34.3 1.3 48 197-263 225-272 (347)
21 2wao_A Endoglucanase E; plant 37.1 11 0.00036 33.8 1.2 49 196-263 212-260 (341)
22 1vcc_A DNA topoisomerase I; DN 35.0 5.2 0.00018 29.0 -1.0 14 115-128 56-70 (77)
23 1k7c_A Rhamnogalacturonan acet 33.7 14 0.00048 31.0 1.3 29 235-267 108-136 (233)
24 2o14_A Hypothetical protein YX 33.4 17 0.00057 33.3 1.9 16 111-126 160-175 (375)
25 3grf_A Ornithine carbamoyltran 32.6 22 0.00075 32.5 2.5 26 110-136 158-183 (328)
26 4amu_A Ornithine carbamoyltran 32.3 25 0.00085 32.7 2.8 25 111-136 178-202 (365)
27 3tpf_A Otcase, ornithine carba 31.9 24 0.00083 31.9 2.7 24 111-136 143-167 (307)
28 3r7f_A Aspartate carbamoyltran 30.7 26 0.00087 31.8 2.6 26 111-136 145-170 (304)
29 3skv_A SSFX3; jelly roll, GDSL 29.2 19 0.00066 33.3 1.6 13 113-125 185-197 (385)
30 3q98_A Transcarbamylase; rossm 28.8 30 0.001 32.6 2.8 26 111-136 189-219 (399)
31 2yfk_A Aspartate/ornithine car 27.8 32 0.0011 32.6 2.8 26 111-136 186-216 (418)
32 3sds_A Ornithine carbamoyltran 27.7 30 0.001 32.0 2.5 23 112-136 187-209 (353)
33 1oth_A Protein (ornithine tran 27.4 29 0.00098 31.6 2.3 24 111-136 153-176 (321)
34 3t6g_B Breast cancer anti-estr 27.1 2.3 7.9E-05 37.2 -4.8 16 111-126 144-159 (229)
35 3csu_A Protein (aspartate carb 27.0 33 0.0011 31.1 2.6 27 111-137 152-178 (310)
36 1pg5_A Aspartate carbamoyltran 26.5 35 0.0012 30.7 2.7 27 111-137 147-173 (299)
37 4f2g_A Otcase 1, ornithine car 24.7 37 0.0013 30.8 2.5 24 111-136 152-175 (309)
38 4ep1_A Otcase, ornithine carba 24.2 38 0.0013 31.2 2.5 24 111-136 177-200 (340)
39 3gd5_A Otcase, ornithine carba 23.7 39 0.0013 30.8 2.5 24 111-136 155-178 (323)
40 4ekn_B Aspartate carbamoyltran 23.3 42 0.0014 30.3 2.6 26 111-136 149-174 (306)
41 4fe3_A Cytosolic 5'-nucleotida 23.1 36 0.0012 29.4 2.0 14 112-125 229-242 (297)
42 4a8t_A Putrescine carbamoyltra 22.4 41 0.0014 30.9 2.4 25 110-136 172-196 (339)
43 1ml4_A Aspartate transcarbamoy 22.1 39 0.0013 30.5 2.2 26 111-136 153-178 (308)
44 4a8p_A Putrescine carbamoyltra 20.6 47 0.0016 30.7 2.4 25 110-136 150-174 (355)
No 1
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=95.53 E-value=0.019 Score=47.32 Aligned_cols=50 Identities=16% Similarity=0.240 Sum_probs=34.8
Q ss_pred CCceEEEEeCcccccccCCCCCcceecCCccccccCChHHHHHHHHHHHHHHHHhcCCCCCceEEEEeCCCC
Q 024246 196 KDMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPT 267 (270)
Q Consensus 196 ~~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~A~r~Al~t~~~wi~~~~~~~k~~VffRT~SP~ 267 (270)
..+|+|||+.|..=.. ...+.|+..|+++++-+.+. .+++++++-|..|.
T Consensus 73 ~~pd~Vvi~~G~ND~~--------------------~~~~~~~~~l~~ii~~l~~~--~p~~~ii~~~~~P~ 122 (200)
T 4h08_A 73 TKFDVIHFNNGLHGFD--------------------YTEEEYDKSFPKLIKIIRKY--APKAKLIWANTTPV 122 (200)
T ss_dssp SCCSEEEECCCSSCTT--------------------SCHHHHHHHHHHHHHHHHHH--CTTCEEEEECCCCC
T ss_pred CCCCeEEEEeeeCCCC--------------------CCHHHHHHHHHHHHHHHhhh--CCCccEEEeccCCC
Confidence 3579999998864211 12467888888888877653 45778888888774
No 2
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=79.45 E-value=0.78 Score=38.01 Aligned_cols=16 Identities=25% Similarity=0.696 Sum_probs=13.7
Q ss_pred cCCeEEEEecchhHHH
Q 024246 112 RGKRIMFVGDSLSLNM 127 (270)
Q Consensus 112 rgK~l~FVGDSl~Rnq 127 (270)
.+++|+|+|||+++..
T Consensus 25 ~~~~Iv~~GDSit~gw 40 (209)
T 4hf7_A 25 KEKRVVFMGNXITEGW 40 (209)
T ss_dssp GGCCEEEEESHHHHHH
T ss_pred CCCeEEEECcHHHhCh
Confidence 5678999999999863
No 3
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=77.11 E-value=0.78 Score=36.52 Aligned_cols=49 Identities=6% Similarity=0.085 Sum_probs=29.6
Q ss_pred CceEEEEeCcccccccCCCCCcceecCCccccccCChHHHHHHHHHHHHHHHHhcCCCCCceEEEEeC-CCC
Q 024246 197 DMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGI-SPT 267 (270)
Q Consensus 197 ~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~A~r~Al~t~~~wi~~~~~~~k~~VffRT~-SP~ 267 (270)
.+|+||+..|.-=. .. + . ..+.|+..++.+++.+.+. +.+|++-++ .|.
T Consensus 66 ~pd~vvi~~G~ND~----------~~-~------~-~~~~~~~~~~~~i~~~~~~----~~~vvl~~~~~p~ 115 (185)
T 3hp4_A 66 EPTHVLIELGANDG----------LR-G------F-PVKKMQTNLTALVKKSQAA----NAMTALMEIYIPP 115 (185)
T ss_dssp CCSEEEEECCHHHH----------HT-T------C-CHHHHHHHHHHHHHHHHHT----TCEEEEECCCCCS
T ss_pred CCCEEEEEeecccC----------CC-C------c-CHHHHHHHHHHHHHHHHHc----CCeEEEEeCCCCC
Confidence 56999999885321 10 1 1 2467788888888777653 345666553 443
No 4
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=71.24 E-value=1.6 Score=35.19 Aligned_cols=26 Identities=4% Similarity=0.171 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCceEEEEe
Q 024246 234 LEAFYKGMSTWARWVDLNVDPSQTKVFFQG 263 (270)
Q Consensus 234 ~~A~r~Al~t~~~wi~~~~~~~k~~VffRT 263 (270)
.+.|+..++.+++.+.+. +.++++-|
T Consensus 112 ~~~~~~~l~~~i~~~~~~----~~~vil~~ 137 (216)
T 3rjt_A 112 IDEYRDTLRHLVATTKPR----VREMFLLS 137 (216)
T ss_dssp HHHHHHHHHHHHHHHGGG----SSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHhc----CCeEEEEC
Confidence 578888888888877654 56777766
No 5
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=64.85 E-value=2 Score=34.37 Aligned_cols=46 Identities=7% Similarity=-0.015 Sum_probs=27.6
Q ss_pred CceEEEEeCcccccccCCCCCcceecCCccccccCChHHHHHHHHHHHHHHHHhcCCCCCceEEEEeC
Q 024246 197 DMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGI 264 (270)
Q Consensus 197 ~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~A~r~Al~t~~~wi~~~~~~~k~~VffRT~ 264 (270)
.+|+||+..|.==. .. + . ..+.|+..++.+++.+.+. +.++++-+.
T Consensus 62 ~pd~Vii~~G~ND~----------~~-~------~-~~~~~~~~l~~li~~~~~~----~~~vil~~~ 107 (190)
T 1ivn_A 62 QPRWVLVELGGNDG----------LR-G------F-QPQQTEQTLRQILQDVKAA----NAEPLLMQI 107 (190)
T ss_dssp CCSEEEEECCTTTT----------SS-S------C-CHHHHHHHHHHHHHHHHHT----TCEEEEECC
T ss_pred CCCEEEEEeecccc----------cc-C------C-CHHHHHHHHHHHHHHHHHc----CCCEEEEec
Confidence 36999998874221 10 0 1 1467788888887776653 345666554
No 6
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae}
Probab=64.37 E-value=2.1 Score=35.23 Aligned_cols=53 Identities=8% Similarity=-0.005 Sum_probs=31.6
Q ss_pred CCceEEEEeCcccccccCCCCCcceecCCccccccCChHHHHHHHHHHHHHHHHhcCCCCCceEEEEeCCC
Q 024246 196 KDMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISP 266 (270)
Q Consensus 196 ~~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~A~r~Al~t~~~wi~~~~~~~k~~VffRT~SP 266 (270)
..+|+||+..|.==.. ..+. .....+.|+..++.+++-+.+. +.+|++-|..|
T Consensus 71 ~~pd~vvi~~G~ND~~----------~~~~----~~~~~~~~~~~l~~~i~~~~~~----~~~vil~~~~p 123 (240)
T 3mil_A 71 SNIVMATIFLGANDAC----------SAGP----QSVPLPEFIDNIRQMVSLMKSY----HIRPIIIGPGL 123 (240)
T ss_dssp CCEEEEEEECCTTTTS----------SSST----TCCCHHHHHHHHHHHHHHHHHT----TCEEEEECCCC
T ss_pred CCCCEEEEEeecCcCC----------ccCC----CCCCHHHHHHHHHHHHHHHHHc----CCeEEEEcCCC
Confidence 4689999998852211 0000 0112567788888887766653 45788877655
No 7
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5
Probab=61.07 E-value=2.5 Score=33.33 Aligned_cols=50 Identities=10% Similarity=-0.009 Sum_probs=29.7
Q ss_pred CCceEEEEeCcccccccCCCCCcceecCCccccccCChHHHHHHHHHHHHHHHHhcCCCCCceEEEEeCCCC
Q 024246 196 KDMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPT 267 (270)
Q Consensus 196 ~~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~A~r~Al~t~~~wi~~~~~~~k~~VffRT~SP~ 267 (270)
..+|+||+..|.-=. .. +.. ...+.|+..++.+++.+. +.++++-+..|.
T Consensus 66 ~~pd~vvi~~G~ND~----------~~-~~~-----~~~~~~~~~l~~~i~~~~------~~~vi~~~~~p~ 115 (195)
T 1yzf_A 66 EKPDEVVIFFGANDA----------SL-DRN-----ITVATFRENLETMIHEIG------SEKVILITPPYA 115 (195)
T ss_dssp GCCSEEEEECCTTTT----------CT-TSC-----CCHHHHHHHHHHHHHHHC------GGGEEEECCCCC
T ss_pred cCCCEEEEEeecccc----------Cc-cCC-----CCHHHHHHHHHHHHHHhc------CCEEEEEcCCCC
Confidence 457999999885221 10 000 124577777777777553 456777776653
No 8
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=59.45 E-value=3.1 Score=33.27 Aligned_cols=52 Identities=13% Similarity=0.164 Sum_probs=30.8
Q ss_pred CceEEEEeCcccccccCCCCCcceecCCccccccCChHHHHHHHHHHHHHHHHhcCCCCCceEEEEeCCCC
Q 024246 197 DMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPT 267 (270)
Q Consensus 197 ~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~A~r~Al~t~~~wi~~~~~~~k~~VffRT~SP~ 267 (270)
.+|+|||..|.==.. .... ....+.|+..++.+++.+.+ ++.+|++-|..|.
T Consensus 74 ~pd~vvi~~G~ND~~----------~~~~-----~~~~~~~~~~~~~~i~~~~~----~~~~vil~~~~p~ 125 (204)
T 3p94_A 74 KPKAVVILAGINDIA----------HNNG-----VIALENVFGNLVSMAELAKA----NHIKVIFCSVLPA 125 (204)
T ss_dssp CEEEEEEECCHHHHT----------TTTS-----CCCHHHHHHHHHHHHHHHHH----TTCEEEEECCCCC
T ss_pred CCCEEEEEeecCccc----------cccC-----CCCHHHHHHHHHHHHHHHHh----CCCeEEEEeCCCC
Confidence 479999988853211 0000 01245677777777776654 3567787777664
No 9
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A*
Probab=57.42 E-value=3.1 Score=33.67 Aligned_cols=53 Identities=21% Similarity=0.119 Sum_probs=31.6
Q ss_pred ceEEEEeCcccccccCCCCCcceecCCccccccCChHHHHHHHHHHHHHHHHhcC-----CCCCceEEEEeCCC
Q 024246 198 MDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNV-----DPSQTKVFFQGISP 266 (270)
Q Consensus 198 ~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~A~r~Al~t~~~wi~~~~-----~~~k~~VffRT~SP 266 (270)
+|+||+..|.-=... .+ + . ..+.|+..++.+++.+.+.- ..++.+|++-+.-|
T Consensus 84 ~d~vvi~~G~ND~~~-------~~--~------~-~~~~~~~~l~~li~~~~~~~~~~~~~~P~~~iil~~~p~ 141 (216)
T 2q0q_A 84 LDLVIIMLGTNDTKA-------YF--R------R-TPLDIALGMSVLVTQVLTSAGGVGTTYPAPKVLVVSPPP 141 (216)
T ss_dssp CSEEEEECCTGGGSG-------GG--C------C-CHHHHHHHHHHHHHHHHTCTTTTTBCCCCCEEEEEECCC
T ss_pred CCEEEEEecCcccch-------hc--C------C-CHHHHHHHHHHHHHHHHHhcccccccCCCCeEEEEeCCC
Confidence 499999988643210 00 1 1 24678888888888776532 00456777776543
No 10
>2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3
Probab=54.81 E-value=4.5 Score=32.72 Aligned_cols=52 Identities=10% Similarity=0.028 Sum_probs=32.6
Q ss_pred CceEEEEeCcccccccCCCCCcceecCCccccccCChHHHHHHHHHHHHHHHHhcCCCCCceEEEEeCCCCC
Q 024246 197 DMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTH 268 (270)
Q Consensus 197 ~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~A~r~Al~t~~~wi~~~~~~~k~~VffRT~SP~H 268 (270)
.+|+||+..|.-=. .. + . ..+.|+..++.+++.+.+. .++.+|++-+..|..
T Consensus 85 ~pd~vvi~~G~ND~----------~~-~------~-~~~~~~~~l~~~i~~l~~~--~p~~~iil~~~~p~~ 136 (214)
T 2hsj_A 85 AVDKIFLLIGTNDI----------GK-D------V-PVNEALNNLEAIIQSVARD--YPLTEIKLLSILPVN 136 (214)
T ss_dssp CCCEEEEECCHHHH----------HT-T------C-CHHHHHHHHHHHHHHHHHH--CTTCEEEEECCCCCC
T ss_pred CCCEEEEEEecCcC----------Cc-C------C-CHHHHHHHHHHHHHHHHHh--CCCCeEEEEecCCCC
Confidence 57999998885221 11 1 1 1456777777777776654 245678888877653
No 11
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str}
Probab=53.93 E-value=3.8 Score=34.12 Aligned_cols=33 Identities=24% Similarity=0.274 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHHHHhcCC---CCCceEEEEeCCC
Q 024246 234 LEAFYKGMSTWARWVDLNVD---PSQTKVFFQGISP 266 (270)
Q Consensus 234 ~~A~r~Al~t~~~wi~~~~~---~~k~~VffRT~SP 266 (270)
.+.|+..|+.+++.+.+... .++++|++-+..|
T Consensus 122 ~~~~~~~l~~li~~ir~~~~~~~~p~~~iil~~p~~ 157 (232)
T 3dci_A 122 AEAAVSGMRRLAQIVETFIYKPREAVPKLLIVAPPP 157 (232)
T ss_dssp HHHHHHHHHHHHHHHHHCCCSSTTCCCEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHhcccccCCCCeEEEEeCCC
Confidence 56788888888887766421 1467788777544
No 12
>4i8i_A Hypothetical protein; 5-stranded beta sheet flanked by 8 helices fold, structural joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides uniformis}
Probab=53.23 E-value=15 Score=32.47 Aligned_cols=120 Identities=9% Similarity=0.040 Sum_probs=62.8
Q ss_pred CeEEEEecchhHHHHHHHHhhhhcccCCCeeeeeecCccEEEEEeecceEEEEEEccceeeeeec------ccccE----
Q 024246 114 KRIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVDIVKQ------KVGRV---- 183 (270)
Q Consensus 114 K~l~FVGDSl~Rnq~~SLlClL~~~~~~~~~~~~~~~~~~~~~f~~~n~tv~f~WsPfLv~~~~~------~~~~~---- 183 (270)
.||+|||-|++-|-+..++.-|..+... . ...-.....|.+++.+|.+........ ..+..
T Consensus 11 ~rVL~IGNS~t~n~~p~~l~~la~a~g~-~--------~~v~~~~igG~~L~~H~~~~~~~~~~~~y~k~~~~g~~~~~~ 81 (271)
T 4i8i_A 11 IKVLAIGNSFSQDAVEQYLHELGEAEGI-T--------MIIGNMFIGGCSLERHVQNIRNNAPAYAYRKVEKDGEKTETR 81 (271)
T ss_dssp EEEEEEESHHHHHHHSSSHHHHHHTTTC-E--------EEEEEEECTTCCHHHHHHHHHTTCCCEEEEEECTTSCEEEEE
T ss_pred eEEEEECCCCCcCcHHHHHHHHHHhcCC-c--------eEEEEEecCCccHHHHHhccccccccccccccccCCcccccc
Confidence 4899999999976664444444332211 1 111122345777888887764320000 00000
Q ss_pred -EEecccccCCCCCCceEEEEeCcccccccCCCCCcceecCCccccccCChHHHHHHHHHHHHHHHHhcCCCCCceEEEE
Q 024246 184 -LTLNSIQAGKFWKDMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQ 262 (270)
Q Consensus 184 -l~lD~~~~~~~~~~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~A~r~Al~t~~~wi~~~~~~~k~~VffR 262 (270)
..+. .+-.-+..|+||+--+..-. ...+.|+..++.+.+.+.+...+.-..+|+.
T Consensus 82 ~~~~~---~~L~~~~wD~VilQe~S~~~---------------------~~~~~~~~~~~~l~~~ir~~~~p~ak~il~~ 137 (271)
T 4i8i_A 82 SMTIE---KALADEKWDYISVQQASPLS---------------------GIYDSYKASLPELVNYIRERIGKETVLMMHQ 137 (271)
T ss_dssp EECHH---HHHHHSCCSEEEECCCGGGT---------------------TCHHHHHHHHHHHHHHHHTTSCTTCEEEEEE
T ss_pred chhHH---HHhhcCCCCEEEeCCCCCCC---------------------CCHHHHHHHHHHHHHHHHhhcCCCCEEEEEe
Confidence 0110 11012346999975433211 1256888999999998876542333456777
Q ss_pred eCCC
Q 024246 263 GISP 266 (270)
Q Consensus 263 T~SP 266 (270)
|.+-
T Consensus 138 TWa~ 141 (271)
T 4i8i_A 138 TWAY 141 (271)
T ss_dssp CCCC
T ss_pred ccCC
Confidence 8764
No 13
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9
Probab=52.80 E-value=5 Score=33.09 Aligned_cols=18 Identities=33% Similarity=0.436 Sum_probs=14.2
Q ss_pred HHhcCCeEEEEecchhHH
Q 024246 109 RRYRGKRIMFVGDSLSLN 126 (270)
Q Consensus 109 ~~lrgK~l~FVGDSl~Rn 126 (270)
..+..++|+|+|||++..
T Consensus 17 ~~~~~~~i~~lGDSit~G 34 (232)
T 3dc7_A 17 GHVSFKRPAWLGDSITAN 34 (232)
T ss_dssp -CBCCSSEEEEESTTTST
T ss_pred cCCCcceEEEEccccccc
Confidence 345668999999999975
No 14
>1vjg_A Putative lipase from the G-D-S-L family; structural genomics center for structural genomics, JCSG, protein structure INI PSI, hydrolase; 2.01A {Nostoc SP} SCOP: c.23.10.6 PDB: 1z8h_A
Probab=51.36 E-value=3.8 Score=33.55 Aligned_cols=54 Identities=11% Similarity=0.006 Sum_probs=33.1
Q ss_pred CCceEEEEeCcccccccCCCCCcceecCCccccccCChHHHHHHHHHHHHHHHHhcCCCCCceEEEEeCCCC
Q 024246 196 KDMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPT 267 (270)
Q Consensus 196 ~~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~A~r~Al~t~~~wi~~~~~~~k~~VffRT~SP~ 267 (270)
..+|+||+..|.==... ..+. .....+.|+..++.+++.+.+. .+|++-+..|.
T Consensus 87 ~~pd~vvi~~G~ND~~~---------~~~~----~~~~~~~~~~~l~~li~~l~~~-----~~iil~~~~p~ 140 (218)
T 1vjg_A 87 EYNSLVVFSFGLNDTTL---------ENGK----PRVSIAETIKNTREILTQAKKL-----YPVLMISPAPY 140 (218)
T ss_dssp TSEEEEEEECCHHHHCE---------ETTE----ESSCHHHHHHHHHHHHHHHHHH-----SCEEEECCCCC
T ss_pred CCCCEEEEEecCCcchh---------hccc----ccCCHHHHHHHHHHHHHHHHHh-----CcEEEECCCCc
Confidence 47899999998632110 0000 0112567888888888877664 46888777664
No 15
>1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A
Probab=50.22 E-value=6.2 Score=32.73 Aligned_cols=23 Identities=30% Similarity=0.521 Sum_probs=16.8
Q ss_pred HHHHHH--hcCCeEEEEecchhHHH
Q 024246 105 GDFLRR--YRGKRIMFVGDSLSLNM 127 (270)
Q Consensus 105 ~~fL~~--lrgK~l~FVGDSl~Rnq 127 (270)
..|.+. -...+|+|+|||++...
T Consensus 29 ~~~~~~~~~~~~~i~~~GDSit~g~ 53 (229)
T 1fxw_F 29 NRFVLDCKDKEPDVLFVGDSMVQLM 53 (229)
T ss_dssp HHHHHHHHHCCCSEEEEESHHHHGG
T ss_pred HHHHHHcccCCCCEEEEecchhcCC
Confidence 345444 35778999999999864
No 16
>3bzw_A Putative lipase; protein structure initiative II, (PSI-II), NYSGXRC, structural genomics; 1.87A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.23.10.9
Probab=50.15 E-value=6.5 Score=33.71 Aligned_cols=16 Identities=31% Similarity=0.808 Sum_probs=13.3
Q ss_pred hcCCeEEEEecchhHH
Q 024246 111 YRGKRIMFVGDSLSLN 126 (270)
Q Consensus 111 lrgK~l~FVGDSl~Rn 126 (270)
..+++|+|+|||++..
T Consensus 24 ~~~~~iv~lGDSiT~G 39 (274)
T 3bzw_A 24 WQGKKVGYIGDSITDP 39 (274)
T ss_dssp TTTCEEEEEESTTTCT
T ss_pred CCCCEEEEEecCcccC
Confidence 4578999999999853
No 17
>1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} SCOP: c.23.10.3 PDB: 1wab_A 1fxw_A 1bwr_A 1bwq_A 1bwp_A 3dt9_A* 3dt6_A* 3dt8_A*
Probab=47.66 E-value=6.7 Score=32.43 Aligned_cols=16 Identities=38% Similarity=0.681 Sum_probs=13.9
Q ss_pred cCCeEEEEecchhHHH
Q 024246 112 RGKRIMFVGDSLSLNM 127 (270)
Q Consensus 112 rgK~l~FVGDSl~Rnq 127 (270)
...+|+|+|||++...
T Consensus 37 ~~~~i~~~GDSit~g~ 52 (232)
T 1es9_A 37 KEPEVVFIGDSLVQLM 52 (232)
T ss_dssp CCCSEEEEESHHHHTH
T ss_pred CCCCEEEEechHhhcc
Confidence 5678999999999984
No 18
>2vpt_A Lipolytic enzyme; esterase, hydrolase; 1.40A {Clostridium thermocellum}
Probab=45.14 E-value=5.8 Score=32.49 Aligned_cols=13 Identities=46% Similarity=0.503 Sum_probs=11.3
Q ss_pred CeEEEEecchhHH
Q 024246 114 KRIMFVGDSLSLN 126 (270)
Q Consensus 114 K~l~FVGDSl~Rn 126 (270)
.+|+|+|||++..
T Consensus 6 ~~i~~~GDSit~G 18 (215)
T 2vpt_A 6 IKIMPVGDSCTEG 18 (215)
T ss_dssp EEEEEEESHHHHT
T ss_pred eEEEecccccccC
Confidence 4799999999975
No 19
>2w9x_A AXE2A, CJCE2B, putative acetyl xylan esterase; carbohydrate esterase family 2, hydrolase; 2.00A {Cellvibrio japonicus}
Probab=39.86 E-value=11 Score=34.23 Aligned_cols=28 Identities=4% Similarity=0.176 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCceEEEEe
Q 024246 234 LEAFYKGMSTWARWVDLNVDPSQTKVFFQG 263 (270)
Q Consensus 234 ~~A~r~Al~t~~~wi~~~~~~~k~~VffRT 263 (270)
.+.|+.+++.+++-+.+. .++++|++-+
T Consensus 266 ~~~~~~~l~~li~~ir~~--~p~a~Iil~~ 293 (366)
T 2w9x_A 266 HADYVANYVKFVKQLHSN--NARAQFILMN 293 (366)
T ss_dssp HHHHHHHHHHHHHHHHHH--CTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHH--CCCCeEEEEe
Confidence 467888888888877654 3466777765
No 20
>2waa_A Acetyl esterase, xylan esterase, putative, AXE2C; carbohydrate binding, plant cell WALL degradation, hydrolase, cellulases; 1.80A {Cellvibrio japonicus}
Probab=39.47 E-value=9.7 Score=34.31 Aligned_cols=48 Identities=13% Similarity=0.078 Sum_probs=29.1
Q ss_pred CceEEEEeCcccccccCCCCCcceecCCccccccCChHHHHHHHHHHHHHHHHhcCCCCCceEEEEe
Q 024246 197 DMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQG 263 (270)
Q Consensus 197 ~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~A~r~Al~t~~~wi~~~~~~~k~~VffRT 263 (270)
.+|+|||..|-==. .. + ....+.|+.+++.+++-+.+. .++++|++-+
T Consensus 225 ~Pd~VvI~lG~ND~----------~~-~------~~~~~~~~~~l~~li~~ir~~--~p~~~I~l~~ 272 (347)
T 2waa_A 225 QPDLIISAIGTNDF----------SP-G------IPDRATYINTYTRFVRTLLDN--HPQATIVLTE 272 (347)
T ss_dssp CCSEEEECCCHHHH----------SS-S------CCCHHHHHHHHHHHHHHHHHH--CTTCEEEECC
T ss_pred CCCEEEEEccccCC----------CC-C------CCcHHHHHHHHHHHHHHHHHH--CCCCEEEEEe
Confidence 57999999874211 10 0 122457777888777776653 2466777755
No 21
>2wao_A Endoglucanase E; plant cell WALL degradation, carbohydrate metabolism, polysaccharide degradation, esterase, hydrolase, cellulases; HET: BGC; 1.80A {Clostridium thermocellum} PDB: 2wab_A*
Probab=37.12 E-value=11 Score=33.80 Aligned_cols=49 Identities=12% Similarity=-0.033 Sum_probs=28.5
Q ss_pred CCceEEEEeCcccccccCCCCCcceecCCccccccCChHHHHHHHHHHHHHHHHhcCCCCCceEEEEe
Q 024246 196 KDMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQG 263 (270)
Q Consensus 196 ~~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~A~r~Al~t~~~wi~~~~~~~k~~VffRT 263 (270)
..+|+|||+.|-==. .. + ....+.|+.+++.+++-|.+. .++++|++-+
T Consensus 212 ~~PdlVvI~lGtND~----------~~-~------~~~~~~~~~~l~~li~~ir~~--~p~a~Iil~~ 260 (341)
T 2wao_A 212 YVPQVVVINLGTNDF----------ST-S------FADKTKFVTAYKNLISEVRRN--YPDAHIFCCV 260 (341)
T ss_dssp CCCSEEEEECCHHHH----------SS-S------CCCHHHHHHHHHHHHHHHHHH--CTTCEEEEEE
T ss_pred CCCCEEEEeCccccC----------CC-C------CCCHHHHHHHHHHHHHHHHHH--CCCCeEEEEe
Confidence 357999998874211 10 0 012456777777777766553 2356677665
No 22
>1vcc_A DNA topoisomerase I; DNA binding; HET: DNA; 1.60A {Vaccinia virus} SCOP: d.121.1.1
Probab=34.99 E-value=5.2 Score=28.96 Aligned_cols=14 Identities=43% Similarity=0.795 Sum_probs=11.2
Q ss_pred eEEEEe-cchhHHHH
Q 024246 115 RIMFVG-DSLSLNMW 128 (270)
Q Consensus 115 ~l~FVG-DSl~Rnq~ 128 (270)
+++||| ||-+|-||
T Consensus 56 ~lIfvG~DSKgrkQY 70 (77)
T 1vcc_A 56 RLIFVGSDSKGRRQY 70 (77)
T ss_dssp SEEEEEECTTSCEEE
T ss_pred ceEEEeecCCCceee
Confidence 589999 88888765
No 23
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A*
Probab=33.73 E-value=14 Score=30.97 Aligned_cols=29 Identities=17% Similarity=0.218 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCceEEEEeCCCC
Q 024246 235 EAFYKGMSTWARWVDLNVDPSQTKVFFQGISPT 267 (270)
Q Consensus 235 ~A~r~Al~t~~~wi~~~~~~~k~~VffRT~SP~ 267 (270)
+.|+..|+.+++-+.+. +.++++-|..|.
T Consensus 108 ~~~~~~l~~~i~~~~~~----g~~vil~tp~p~ 136 (233)
T 1k7c_A 108 LTFPAYLENAAKLFTAK----GAKVILSSQTPN 136 (233)
T ss_dssp EBHHHHHHHHHHHHHHT----TCEEEEECCCCC
T ss_pred HHHHHHHHHHHHHHHHC----CCEEEEECCCCc
Confidence 45777777777655432 346777666553
No 24
>2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8
Probab=33.42 E-value=17 Score=33.34 Aligned_cols=16 Identities=31% Similarity=0.329 Sum_probs=13.8
Q ss_pred hcCCeEEEEecchhHH
Q 024246 111 YRGKRIMFVGDSLSLN 126 (270)
Q Consensus 111 lrgK~l~FVGDSl~Rn 126 (270)
..+++|+|+|||++..
T Consensus 160 ~~~~~Iv~lGDSiT~G 175 (375)
T 2o14_A 160 VTNRTIYVGGDSTVCN 175 (375)
T ss_dssp CCCCEEEEEECTTTSC
T ss_pred CCCcEEEEecCccccC
Confidence 4567999999999987
No 25
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=32.63 E-value=22 Score=32.55 Aligned_cols=26 Identities=23% Similarity=0.403 Sum_probs=22.2
Q ss_pred HhcCCeEEEEecchhHHHHHHHHhhhh
Q 024246 110 RYRGKRIMFVGDSLSLNMWESLSCMIH 136 (270)
Q Consensus 110 ~lrgK~l~FVGDSl~Rnq~~SLlClL~ 136 (270)
.++|++|+||||-.+ |...|++..+.
T Consensus 158 ~l~gl~va~vGD~~~-~va~Sl~~~~~ 183 (328)
T 3grf_A 158 GFKGIKFAYCGDSMN-NVTYDLMRGCA 183 (328)
T ss_dssp TGGGCCEEEESCCSS-HHHHHHHHHHH
T ss_pred ccCCcEEEEeCCCCc-chHHHHHHHHH
Confidence 578999999999876 68899988875
No 26
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=32.28 E-value=25 Score=32.73 Aligned_cols=25 Identities=28% Similarity=0.344 Sum_probs=21.5
Q ss_pred hcCCeEEEEecchhHHHHHHHHhhhh
Q 024246 111 YRGKRIMFVGDSLSLNMWESLSCMIH 136 (270)
Q Consensus 111 lrgK~l~FVGDSl~Rnq~~SLlClL~ 136 (270)
++|++|+||||-.+ |...|++.++.
T Consensus 178 l~glkva~vGD~~n-nva~Sl~~~~~ 202 (365)
T 4amu_A 178 LKNKKIVFIGDYKN-NVGVSTMIGAA 202 (365)
T ss_dssp CTTCEEEEESSTTS-HHHHHHHHHHH
T ss_pred CCCCEEEEECCCCc-chHHHHHHHHH
Confidence 78999999999866 58899988875
No 27
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=31.95 E-value=24 Score=31.92 Aligned_cols=24 Identities=25% Similarity=0.268 Sum_probs=20.1
Q ss_pred hc-CCeEEEEecchhHHHHHHHHhhhh
Q 024246 111 YR-GKRIMFVGDSLSLNMWESLSCMIH 136 (270)
Q Consensus 111 lr-gK~l~FVGDSl~Rnq~~SLlClL~ 136 (270)
++ |++|+|||| . -|...|++..+.
T Consensus 143 l~~gl~va~vGD-~-~~va~Sl~~~~~ 167 (307)
T 3tpf_A 143 QNGIAKVAFIGD-S-NNMCNSWLITAA 167 (307)
T ss_dssp GGGCCEEEEESC-S-SHHHHHHHHHHH
T ss_pred CCCCCEEEEEcC-C-CccHHHHHHHHH
Confidence 67 999999999 3 468899988875
No 28
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=30.68 E-value=26 Score=31.76 Aligned_cols=26 Identities=15% Similarity=0.233 Sum_probs=21.5
Q ss_pred hcCCeEEEEecchhHHHHHHHHhhhh
Q 024246 111 YRGKRIMFVGDSLSLNMWESLSCMIH 136 (270)
Q Consensus 111 lrgK~l~FVGDSl~Rnq~~SLlClL~ 136 (270)
++|++|+||||-..-|...|++..+.
T Consensus 145 l~glkva~vGD~~~~rva~Sl~~~~~ 170 (304)
T 3r7f_A 145 FKGLTVSIHGDIKHSRVARSNAEVLT 170 (304)
T ss_dssp CTTCEEEEESCCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCcchHHHHHHHHH
Confidence 78999999999765578888887775
No 29
>3skv_A SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydrolase fold, trans; 2.49A {Streptomyces SP}
Probab=29.22 E-value=19 Score=33.32 Aligned_cols=13 Identities=23% Similarity=0.332 Sum_probs=11.5
Q ss_pred CCeEEEEecchhH
Q 024246 113 GKRIMFVGDSLSL 125 (270)
Q Consensus 113 gK~l~FVGDSl~R 125 (270)
.++|+|+|||++.
T Consensus 185 ~~~Iv~~GDSiT~ 197 (385)
T 3skv_A 185 KPHWIHYGDSICH 197 (385)
T ss_dssp CCEEEEEECSSCT
T ss_pred CceEEEEeccccC
Confidence 6899999999974
No 30
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=28.82 E-value=30 Score=32.56 Aligned_cols=26 Identities=15% Similarity=0.257 Sum_probs=19.9
Q ss_pred hcCCeEEEEec---chhH--HHHHHHHhhhh
Q 024246 111 YRGKRIMFVGD---SLSL--NMWESLSCMIH 136 (270)
Q Consensus 111 lrgK~l~FVGD---Sl~R--nq~~SLlClL~ 136 (270)
|+|++|++||| |.+| |...|++..+.
T Consensus 189 l~Glkva~vgd~~~~~G~~nnVa~Sli~~~~ 219 (399)
T 3q98_A 189 LKGKKIAMTWAYSPSYGKPLSVPQGIIGLMT 219 (399)
T ss_dssp GTTCEEEEECCCCSSCCCCTHHHHHHHHHHG
T ss_pred cCCCEEEEEEecccccCcchHHHHHHHHHHH
Confidence 57899999998 3344 77788887774
No 31
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=27.78 E-value=32 Score=32.59 Aligned_cols=26 Identities=12% Similarity=0.256 Sum_probs=20.5
Q ss_pred hcCCeEEEEec---chhH--HHHHHHHhhhh
Q 024246 111 YRGKRIMFVGD---SLSL--NMWESLSCMIH 136 (270)
Q Consensus 111 lrgK~l~FVGD---Sl~R--nq~~SLlClL~ 136 (270)
++|++|++||| |.+| |...|++.++.
T Consensus 186 l~Glkva~vgd~~~s~Gd~nnVa~Sli~~l~ 216 (418)
T 2yfk_A 186 LKGKKVAMTWAYSPSYGKPLSVPQGIVGLMT 216 (418)
T ss_dssp GTTCEEEEECCCCSSSCCCSHHHHHHHHHHG
T ss_pred cCCCEEEEEeccccccCccchHHHHHHHHHH
Confidence 67899999987 3456 78888887775
No 32
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=27.67 E-value=30 Score=32.03 Aligned_cols=23 Identities=30% Similarity=0.447 Sum_probs=19.8
Q ss_pred cCCeEEEEecchhHHHHHHHHhhhh
Q 024246 112 RGKRIMFVGDSLSLNMWESLSCMIH 136 (270)
Q Consensus 112 rgK~l~FVGDSl~Rnq~~SLlClL~ 136 (270)
+|++|+||||-. |...|++..+.
T Consensus 187 ~glkva~vGD~~--nva~Sl~~~l~ 209 (353)
T 3sds_A 187 EGLKIAWVGDAN--NVLFDLAIAAT 209 (353)
T ss_dssp TTCEEEEESCCC--HHHHHHHHHHH
T ss_pred CCCEEEEECCCc--hHHHHHHHHHH
Confidence 899999999973 68899988775
No 33
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=27.36 E-value=29 Score=31.65 Aligned_cols=24 Identities=21% Similarity=0.465 Sum_probs=20.2
Q ss_pred hcCCeEEEEecchhHHHHHHHHhhhh
Q 024246 111 YRGKRIMFVGDSLSLNMWESLSCMIH 136 (270)
Q Consensus 111 lrgK~l~FVGDSl~Rnq~~SLlClL~ 136 (270)
++|++|++|||- + |...|++-.+.
T Consensus 153 l~gl~va~vGD~-~-~va~Sl~~~~~ 176 (321)
T 1oth_A 153 LKGLTLSWIGDG-N-NILHSIMMSAA 176 (321)
T ss_dssp CTTCEEEEESCS-S-HHHHHHHTTTG
T ss_pred cCCcEEEEECCc-h-hhHHHHHHHHH
Confidence 789999999994 3 68899888775
No 34
>3t6g_B Breast cancer anti-estrogen resistance protein 1; CDC25-homology domain, GTPase exchange factor, focal-adhesio targeting domain, signaling protein; 2.50A {Homo sapiens}
Probab=27.06 E-value=2.3 Score=37.19 Aligned_cols=16 Identities=31% Similarity=0.742 Sum_probs=14.0
Q ss_pred hcCCeEEEEecchhHH
Q 024246 111 YRGKRIMFVGDSLSLN 126 (270)
Q Consensus 111 lrgK~l~FVGDSl~Rn 126 (270)
|-+.+++||||.+.|+
T Consensus 144 lsAHKLVfIGDTL~r~ 159 (229)
T 3t6g_B 144 LSAHKLVFIGDTLSRQ 159 (229)
T ss_dssp HHHHHHHHHHHHHHHS
T ss_pred EEeeeeeeecchHHHh
Confidence 6678899999999985
No 35
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=26.97 E-value=33 Score=31.13 Aligned_cols=27 Identities=19% Similarity=0.132 Sum_probs=22.0
Q ss_pred hcCCeEEEEecchhHHHHHHHHhhhhc
Q 024246 111 YRGKRIMFVGDSLSLNMWESLSCMIHA 137 (270)
Q Consensus 111 lrgK~l~FVGDSl~Rnq~~SLlClL~~ 137 (270)
++|++|++|||-..-|...|++..+..
T Consensus 152 l~gl~va~vGD~~~~rva~Sl~~~~~~ 178 (310)
T 3csu_A 152 LDNLHVAMVGDLKYGRTVHSLTQALAK 178 (310)
T ss_dssp SSSCEEEEESCTTTCHHHHHHHHHHHT
T ss_pred cCCcEEEEECCCCCCchHHHHHHHHHh
Confidence 789999999996654688898888753
No 36
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=26.50 E-value=35 Score=30.70 Aligned_cols=27 Identities=19% Similarity=0.173 Sum_probs=22.1
Q ss_pred hcCCeEEEEecchhHHHHHHHHhhhhc
Q 024246 111 YRGKRIMFVGDSLSLNMWESLSCMIHA 137 (270)
Q Consensus 111 lrgK~l~FVGDSl~Rnq~~SLlClL~~ 137 (270)
++|++|++|||-..-|...|++-.+..
T Consensus 147 l~gl~va~vGD~~~~rva~Sl~~~~~~ 173 (299)
T 1pg5_A 147 IDGLVFALLGDLKYARTVNSLLRILTR 173 (299)
T ss_dssp STTCEEEEEECCSSCHHHHHHHHHGGG
T ss_pred cCCcEEEEECCCCCCchHHHHHHHHHh
Confidence 789999999997655688898887753
No 37
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=24.66 E-value=37 Score=30.76 Aligned_cols=24 Identities=33% Similarity=0.457 Sum_probs=20.4
Q ss_pred hcCCeEEEEecchhHHHHHHHHhhhh
Q 024246 111 YRGKRIMFVGDSLSLNMWESLSCMIH 136 (270)
Q Consensus 111 lrgK~l~FVGDSl~Rnq~~SLlClL~ 136 (270)
++|++|+||||- -|...|++..+.
T Consensus 152 l~glkva~vGD~--~~va~Sl~~~~~ 175 (309)
T 4f2g_A 152 IRGKTVAWVGDA--NNMLYTWIQAAR 175 (309)
T ss_dssp CTTCEEEEESCC--CHHHHHHHHHHH
T ss_pred CCCCEEEEECCC--cchHHHHHHHHH
Confidence 789999999994 458899988875
No 38
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=24.20 E-value=38 Score=31.19 Aligned_cols=24 Identities=29% Similarity=0.534 Sum_probs=20.3
Q ss_pred hcCCeEEEEecchhHHHHHHHHhhhh
Q 024246 111 YRGKRIMFVGDSLSLNMWESLSCMIH 136 (270)
Q Consensus 111 lrgK~l~FVGDSl~Rnq~~SLlClL~ 136 (270)
++|++|+||||- -|...|++..+.
T Consensus 177 l~glkva~vGD~--~nva~Sl~~~~~ 200 (340)
T 4ep1_A 177 FKGIKLAYVGDG--NNVCHSLLLASA 200 (340)
T ss_dssp CTTCEEEEESCC--CHHHHHHHHHHH
T ss_pred CCCCEEEEECCC--chhHHHHHHHHH
Confidence 789999999996 458889888775
No 39
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=23.71 E-value=39 Score=30.83 Aligned_cols=24 Identities=29% Similarity=0.353 Sum_probs=20.2
Q ss_pred hcCCeEEEEecchhHHHHHHHHhhhh
Q 024246 111 YRGKRIMFVGDSLSLNMWESLSCMIH 136 (270)
Q Consensus 111 lrgK~l~FVGDSl~Rnq~~SLlClL~ 136 (270)
++|++|+||||- -|...|++..+.
T Consensus 155 l~glkva~vGD~--~rva~Sl~~~~~ 178 (323)
T 3gd5_A 155 LAGLKLAYVGDG--NNVAHSLLLGCA 178 (323)
T ss_dssp CTTCEEEEESCC--CHHHHHHHHHHH
T ss_pred CCCCEEEEECCC--CcHHHHHHHHHH
Confidence 789999999997 567888887774
No 40
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=23.34 E-value=42 Score=30.30 Aligned_cols=26 Identities=31% Similarity=0.319 Sum_probs=21.0
Q ss_pred hcCCeEEEEecchhHHHHHHHHhhhh
Q 024246 111 YRGKRIMFVGDSLSLNMWESLSCMIH 136 (270)
Q Consensus 111 lrgK~l~FVGDSl~Rnq~~SLlClL~ 136 (270)
++|++|++|||-..=|...|++..+.
T Consensus 149 l~glkva~vGD~~~~rva~Sl~~~~~ 174 (306)
T 4ekn_B 149 IDGIKIAFVGDLKYGRTVHSLVYALS 174 (306)
T ss_dssp STTCEEEEESCTTTCHHHHHHHHHHH
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHH
Confidence 78999999999664457888887774
No 41
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=23.11 E-value=36 Score=29.40 Aligned_cols=14 Identities=29% Similarity=0.456 Sum_probs=11.6
Q ss_pred cCCeEEEEecchhH
Q 024246 112 RGKRIMFVGDSLSL 125 (270)
Q Consensus 112 rgK~l~FVGDSl~R 125 (270)
.|+.+++|||++|=
T Consensus 229 ~~~~v~~vGDGiND 242 (297)
T 4fe3_A 229 DNSNIILLGDSQGD 242 (297)
T ss_dssp TCCEEEEEESSGGG
T ss_pred cCCEEEEEeCcHHH
Confidence 46779999999875
No 42
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=22.37 E-value=41 Score=30.86 Aligned_cols=25 Identities=24% Similarity=0.446 Sum_probs=20.3
Q ss_pred HhcCCeEEEEecchhHHHHHHHHhhhh
Q 024246 110 RYRGKRIMFVGDSLSLNMWESLSCMIH 136 (270)
Q Consensus 110 ~lrgK~l~FVGDSl~Rnq~~SLlClL~ 136 (270)
.++|++|+||||- -|...|++..+.
T Consensus 172 ~l~glkva~vGD~--~rva~Sl~~~~~ 196 (339)
T 4a8t_A 172 KLEDCKVVFVGDA--TQVCFSLGLITT 196 (339)
T ss_dssp CGGGCEEEEESSC--CHHHHHHHHHHH
T ss_pred CCCCCEEEEECCC--chhHHHHHHHHH
Confidence 3678999999997 567888888775
No 43
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=22.11 E-value=39 Score=30.51 Aligned_cols=26 Identities=23% Similarity=0.193 Sum_probs=21.5
Q ss_pred hcCCeEEEEecchhHHHHHHHHhhhh
Q 024246 111 YRGKRIMFVGDSLSLNMWESLSCMIH 136 (270)
Q Consensus 111 lrgK~l~FVGDSl~Rnq~~SLlClL~ 136 (270)
++|++|++|||-..-|...|++-.+.
T Consensus 153 l~gl~va~vGD~~~~rva~Sl~~~~~ 178 (308)
T 1ml4_A 153 IDGLKIGLLGDLKYGRTVHSLAEALT 178 (308)
T ss_dssp SSSEEEEEESCTTTCHHHHHHHHHGG
T ss_pred CCCeEEEEeCCCCcCchHHHHHHHHH
Confidence 78899999999765468889888775
No 44
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=20.61 E-value=47 Score=30.71 Aligned_cols=25 Identities=24% Similarity=0.446 Sum_probs=20.3
Q ss_pred HhcCCeEEEEecchhHHHHHHHHhhhh
Q 024246 110 RYRGKRIMFVGDSLSLNMWESLSCMIH 136 (270)
Q Consensus 110 ~lrgK~l~FVGDSl~Rnq~~SLlClL~ 136 (270)
.++|++|+||||- -|...|++..+.
T Consensus 150 ~l~glkva~vGD~--~rva~Sl~~~~~ 174 (355)
T 4a8p_A 150 KLEDCKVVFVGDA--TQVCFSLGLITT 174 (355)
T ss_dssp CGGGCEEEEESCC--CHHHHHHHHHHH
T ss_pred CCCCCEEEEECCC--chhHHHHHHHHH
Confidence 3678999999997 567888888775
Done!