Query 024248
Match_columns 270
No_of_seqs 198 out of 1644
Neff 7.4
Searched_HMMs 46136
Date Fri Mar 29 03:10:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024248.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024248hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd01337 MDH_glyoxysomal_mitoch 100.0 1E-50 2.2E-55 370.0 23.0 216 47-263 1-217 (310)
2 TIGR01772 MDH_euk_gproteo mala 100.0 2.7E-49 5.9E-54 361.2 22.1 216 48-263 1-216 (312)
3 PLN00106 malate dehydrogenase 100.0 1.2E-48 2.6E-53 358.4 26.0 230 34-263 6-235 (323)
4 KOG1495 Lactate dehydrogenase 100.0 7.1E-49 1.5E-53 342.2 19.6 217 46-269 20-251 (332)
5 COG0039 Mdh Malate/lactate deh 100.0 1.3E-48 2.8E-53 353.6 20.2 212 47-265 1-224 (313)
6 cd05290 LDH_3 A subgroup of L- 100.0 2.5E-47 5.5E-52 348.0 20.1 212 48-268 1-230 (307)
7 TIGR01759 MalateDH-SF1 malate 100.0 2.1E-46 4.6E-51 343.8 20.3 216 45-268 2-238 (323)
8 cd05293 LDH_1 A subgroup of L- 100.0 3.3E-46 7.2E-51 341.5 21.2 215 46-267 3-232 (312)
9 PLN02602 lactate dehydrogenase 100.0 3.5E-45 7.7E-50 338.7 21.8 214 47-267 38-266 (350)
10 PRK05442 malate dehydrogenase; 100.0 1.4E-45 3.1E-50 338.7 18.7 216 45-268 3-239 (326)
11 TIGR01771 L-LDH-NAD L-lactate 100.0 1.1E-44 2.4E-49 329.8 18.5 209 51-267 1-224 (299)
12 PTZ00325 malate dehydrogenase; 100.0 8.2E-44 1.8E-48 326.1 23.8 216 47-265 9-225 (321)
13 PRK05086 malate dehydrogenase; 100.0 7.4E-44 1.6E-48 326.2 23.2 215 47-263 1-217 (312)
14 KOG1494 NAD-dependent malate d 100.0 2.9E-44 6.3E-49 314.7 19.3 225 45-269 27-252 (345)
15 PRK00066 ldh L-lactate dehydro 100.0 8.2E-44 1.8E-48 326.3 22.2 214 45-267 5-233 (315)
16 PLN00112 malate dehydrogenase 100.0 4.3E-44 9.4E-49 338.5 20.5 217 44-267 98-334 (444)
17 TIGR01757 Malate-DH_plant mala 100.0 6E-44 1.3E-48 333.0 20.7 217 44-267 42-278 (387)
18 cd00704 MDH Malate dehydrogena 100.0 5.5E-44 1.2E-48 328.1 18.8 214 47-268 1-238 (323)
19 cd01338 MDH_choloroplast_like 100.0 1E-43 2.3E-48 326.2 20.3 216 45-268 1-237 (322)
20 cd05291 HicDH_like L-2-hydroxy 100.0 7.9E-43 1.7E-47 318.8 21.0 213 47-267 1-227 (306)
21 cd00300 LDH_like L-lactate deh 100.0 7.3E-43 1.6E-47 318.2 19.9 212 49-267 1-222 (300)
22 TIGR01763 MalateDH_bact malate 100.0 3E-42 6.5E-47 314.7 20.3 209 47-263 2-219 (305)
23 TIGR01758 MDH_euk_cyt malate d 100.0 1.2E-41 2.5E-46 312.9 19.2 213 48-266 1-236 (324)
24 PTZ00117 malate dehydrogenase; 100.0 4.4E-41 9.5E-46 308.9 22.6 210 45-262 4-227 (319)
25 cd05292 LDH_2 A subgroup of L- 100.0 3.8E-41 8.3E-46 307.9 21.4 212 47-267 1-228 (308)
26 PTZ00082 L-lactate dehydrogena 100.0 5.6E-41 1.2E-45 308.2 22.3 211 45-263 5-234 (321)
27 cd05294 LDH-like_MDH_nadp A la 100.0 4.6E-41 9.9E-46 307.5 21.1 216 47-268 1-229 (309)
28 cd01336 MDH_cytoplasmic_cytoso 100.0 1.2E-40 2.5E-45 306.5 18.8 215 45-266 1-239 (325)
29 PRK06223 malate dehydrogenase; 100.0 9E-40 1.9E-44 298.4 21.7 208 47-262 3-219 (307)
30 cd01339 LDH-like_MDH L-lactate 100.0 3.3E-39 7.1E-44 294.1 20.6 207 49-263 1-216 (300)
31 PLN00135 malate dehydrogenase 100.0 1.2E-37 2.7E-42 284.0 16.7 187 74-266 15-219 (309)
32 cd05295 MDH_like Malate dehydr 100.0 4.3E-37 9.4E-42 290.9 18.2 212 45-265 122-365 (452)
33 cd00650 LDH_MDH_like NAD-depen 100.0 1.5E-36 3.3E-41 271.7 19.5 182 49-235 1-186 (263)
34 TIGR01756 LDH_protist lactate 100.0 2.1E-36 4.5E-41 276.5 17.9 192 68-268 13-222 (313)
35 PF00056 Ldh_1_N: lactate/mala 100.0 2.3E-31 5E-36 217.4 13.4 139 47-190 1-141 (141)
36 KOG1496 Malate dehydrogenase [ 100.0 1E-29 2.2E-34 219.2 12.6 218 45-267 3-242 (332)
37 cd05197 GH4_glycoside_hydrolas 99.9 4.6E-24 1E-28 202.6 16.3 171 47-235 1-204 (425)
38 PRK15076 alpha-galactosidase; 99.9 1.1E-23 2.5E-28 200.4 14.3 165 47-223 2-200 (431)
39 cd05296 GH4_P_beta_glucosidase 99.9 9.7E-23 2.1E-27 193.3 15.5 166 47-223 1-197 (419)
40 cd05297 GH4_alpha_glucosidase_ 99.9 2.6E-21 5.6E-26 184.2 14.9 167 47-223 1-198 (423)
41 cd05298 GH4_GlvA_pagL_like Gly 99.8 2.7E-20 5.9E-25 177.2 16.3 167 47-223 1-197 (437)
42 PF02056 Glyco_hydro_4: Family 99.8 5.2E-18 1.1E-22 143.6 13.4 152 48-209 1-183 (183)
43 COG1486 CelF Alpha-galactosida 99.8 1.1E-17 2.5E-22 157.1 15.6 169 45-223 2-201 (442)
44 PF02866 Ldh_1_C: lactate/mala 99.6 1.1E-15 2.3E-20 129.0 6.9 74 192-266 1-85 (174)
45 COG1004 Ugd Predicted UDP-gluc 99.3 1.3E-10 2.8E-15 108.0 15.1 113 47-170 1-128 (414)
46 PF02737 3HCDH_N: 3-hydroxyacy 99.1 1.3E-10 2.8E-15 98.7 7.1 120 48-192 1-136 (180)
47 COG1250 FadB 3-hydroxyacyl-CoA 99.1 7.1E-10 1.5E-14 101.1 12.0 161 47-235 4-201 (307)
48 PRK15181 Vi polysaccharide bio 99.0 3.7E-09 7.9E-14 98.1 11.9 174 45-223 14-200 (348)
49 PLN02166 dTDP-glucose 4,6-dehy 99.0 6.3E-09 1.4E-13 99.8 13.6 174 43-222 117-297 (436)
50 PF03721 UDPG_MGDP_dh_N: UDP-g 99.0 1.6E-09 3.4E-14 92.4 8.5 124 47-182 1-140 (185)
51 PLN02650 dihydroflavonol-4-red 98.9 1.6E-08 3.4E-13 93.6 13.3 178 44-223 3-198 (351)
52 COG1087 GalE UDP-glucose 4-epi 98.9 9.4E-09 2E-13 92.6 11.2 164 47-222 1-176 (329)
53 PLN02427 UDP-apiose/xylose syn 98.9 1.3E-08 2.9E-13 95.5 12.3 176 43-222 11-216 (386)
54 PRK07066 3-hydroxybutyryl-CoA 98.9 1.9E-08 4.1E-13 92.8 12.5 145 47-214 8-182 (321)
55 PLN02695 GDP-D-mannose-3',5'-e 98.9 2E-08 4.3E-13 94.2 12.8 175 44-223 19-202 (370)
56 PLN00198 anthocyanidin reducta 98.9 7.2E-08 1.6E-12 88.7 16.1 176 45-222 8-202 (338)
57 KOG1502 Flavonol reductase/cin 98.9 2.8E-08 6E-13 91.1 13.0 168 45-222 5-198 (327)
58 PF01073 3Beta_HSD: 3-beta hyd 98.9 1.3E-08 2.8E-13 92.1 10.3 107 50-156 1-109 (280)
59 PRK08125 bifunctional UDP-gluc 98.8 3.3E-08 7.3E-13 99.4 13.4 169 45-222 314-497 (660)
60 PF02719 Polysacc_synt_2: Poly 98.8 1.4E-09 3E-14 98.5 3.0 167 49-234 1-185 (293)
61 COG0451 WcaG Nucleoside-diphos 98.8 3.8E-08 8.3E-13 88.6 12.2 169 47-224 1-178 (314)
62 PLN02206 UDP-glucuronate decar 98.8 5.8E-08 1.3E-12 93.3 13.9 174 43-222 116-296 (442)
63 TIGR02437 FadB fatty oxidation 98.8 1.5E-08 3.4E-13 102.5 9.6 143 47-214 314-491 (714)
64 TIGR03589 PseB UDP-N-acetylglu 98.8 5.4E-08 1.2E-12 89.5 12.4 168 46-232 4-180 (324)
65 TIGR02622 CDP_4_6_dhtase CDP-g 98.8 1.5E-07 3.3E-12 87.0 15.5 174 46-222 4-193 (349)
66 PRK11154 fadJ multifunctional 98.8 4.4E-08 9.5E-13 99.3 12.7 143 47-214 310-488 (708)
67 PRK08293 3-hydroxybutyryl-CoA 98.8 3.5E-08 7.5E-13 89.5 10.7 103 47-168 4-123 (287)
68 PRK11730 fadB multifunctional 98.8 2E-08 4.2E-13 101.9 9.7 143 47-214 314-491 (715)
69 PRK07819 3-hydroxybutyryl-CoA 98.8 3E-08 6.6E-13 90.0 9.9 101 48-168 7-124 (286)
70 PLN02662 cinnamyl-alcohol dehy 98.8 9.9E-08 2.1E-12 86.8 13.3 170 46-222 4-196 (322)
71 COG1086 Predicted nucleoside-d 98.8 6E-08 1.3E-12 93.9 11.9 170 46-234 250-433 (588)
72 PLN02572 UDP-sulfoquinovose sy 98.8 7.7E-08 1.7E-12 92.4 12.6 177 44-223 45-263 (442)
73 TIGR02441 fa_ox_alpha_mit fatt 98.8 1.7E-08 3.7E-13 102.5 8.3 143 47-214 336-513 (737)
74 TIGR02440 FadJ fatty oxidation 98.7 3.3E-08 7.2E-13 100.0 9.4 143 47-214 305-483 (699)
75 TIGR01181 dTDP_gluc_dehyt dTDP 98.7 2.6E-07 5.6E-12 83.2 14.1 174 48-222 1-184 (317)
76 PRK11908 NAD-dependent epimera 98.7 2.6E-07 5.6E-12 85.4 14.4 164 47-222 2-183 (347)
77 TIGR01472 gmd GDP-mannose 4,6- 98.7 2.8E-07 6.1E-12 85.0 14.3 171 47-221 1-189 (343)
78 PLN02896 cinnamyl-alcohol dehy 98.7 2.5E-07 5.3E-12 85.8 13.8 174 44-222 8-210 (353)
79 PLN02353 probable UDP-glucose 98.7 3.1E-07 6.7E-12 88.9 14.5 119 47-169 2-134 (473)
80 PLN02214 cinnamoyl-CoA reducta 98.7 2.8E-07 6.1E-12 85.4 13.7 170 46-223 10-196 (342)
81 PRK10084 dTDP-glucose 4,6 dehy 98.7 3.5E-07 7.6E-12 84.5 14.1 175 47-222 1-201 (352)
82 PRK10217 dTDP-glucose 4,6-dehy 98.7 4.6E-07 9.9E-12 83.8 14.6 172 47-223 2-195 (355)
83 TIGR03466 HpnA hopanoid-associ 98.7 2.5E-07 5.5E-12 83.9 12.6 167 47-222 1-175 (328)
84 TIGR01915 npdG NADPH-dependent 98.7 9E-07 2E-11 77.2 15.0 150 47-223 1-166 (219)
85 PRK05808 3-hydroxybutyryl-CoA 98.7 1.6E-07 3.4E-12 84.8 10.6 103 47-169 4-122 (282)
86 PLN02989 cinnamyl-alcohol dehy 98.7 5.3E-07 1.1E-11 82.4 14.0 175 46-222 5-198 (325)
87 PLN02653 GDP-mannose 4,6-dehyd 98.6 5E-07 1.1E-11 83.2 13.4 174 44-222 4-196 (340)
88 PRK09987 dTDP-4-dehydrorhamnos 98.6 1.2E-07 2.6E-12 86.2 9.1 156 47-229 1-164 (299)
89 CHL00194 ycf39 Ycf39; Provisio 98.6 2.5E-07 5.3E-12 84.7 11.2 108 47-163 1-109 (317)
90 TIGR02279 PaaC-3OHAcCoADH 3-hy 98.6 1.8E-07 4E-12 91.2 10.5 144 45-212 4-181 (503)
91 PF01210 NAD_Gly3P_dh_N: NAD-d 98.6 2.2E-07 4.8E-12 77.0 8.8 112 48-180 1-121 (157)
92 PRK11150 rfaD ADP-L-glycero-D- 98.6 1E-06 2.2E-11 79.9 13.9 166 49-223 2-175 (308)
93 PLN02986 cinnamyl-alcohol dehy 98.6 1.5E-06 3.3E-11 79.3 15.0 175 46-222 5-197 (322)
94 PLN02778 3,5-epimerase/4-reduc 98.6 3E-07 6.5E-12 83.7 10.1 143 43-211 6-163 (298)
95 KOG2304 3-hydroxyacyl-CoA dehy 98.6 3.1E-08 6.7E-13 85.9 3.3 145 47-214 12-195 (298)
96 PLN02260 probable rhamnose bio 98.6 1.5E-06 3.2E-11 87.6 15.6 178 44-223 4-194 (668)
97 PF01370 Epimerase: NAD depend 98.6 2E-07 4.4E-12 80.4 8.0 168 49-222 1-174 (236)
98 PLN02583 cinnamoyl-CoA reducta 98.6 1.5E-06 3.2E-11 78.9 13.8 173 46-222 6-197 (297)
99 PRK06035 3-hydroxyacyl-CoA deh 98.5 5.1E-07 1.1E-11 81.9 10.3 102 47-168 4-124 (291)
100 PRK09260 3-hydroxybutyryl-CoA 98.5 6.7E-07 1.5E-11 81.0 11.0 103 47-168 2-120 (288)
101 PRK07530 3-hydroxybutyryl-CoA 98.5 6.4E-07 1.4E-11 81.3 10.7 102 47-168 5-122 (292)
102 PRK08268 3-hydroxy-acyl-CoA de 98.5 4E-07 8.8E-12 88.9 10.0 141 47-212 8-183 (507)
103 PRK10675 UDP-galactose-4-epime 98.5 2.2E-06 4.8E-11 78.5 13.8 171 47-222 1-184 (338)
104 TIGR03026 NDP-sugDHase nucleot 98.5 2.9E-06 6.3E-11 80.8 14.8 122 47-179 1-137 (411)
105 PRK06129 3-hydroxyacyl-CoA deh 98.5 9.1E-07 2E-11 81.0 10.8 103 47-167 3-120 (308)
106 PRK15057 UDP-glucose 6-dehydro 98.5 1.9E-06 4.1E-11 81.6 13.0 110 47-168 1-123 (388)
107 PLN02686 cinnamoyl-CoA reducta 98.5 4.4E-06 9.5E-11 78.3 14.8 177 43-222 50-250 (367)
108 PRK07531 bifunctional 3-hydrox 98.4 2.1E-06 4.5E-11 83.8 12.2 105 46-168 4-119 (495)
109 PLN02545 3-hydroxybutyryl-CoA 98.4 1.9E-06 4.1E-11 78.3 10.5 102 47-168 5-122 (295)
110 PRK06130 3-hydroxybutyryl-CoA 98.4 3.3E-06 7.2E-11 77.2 12.2 103 47-168 5-118 (311)
111 PRK15182 Vi polysaccharide bio 98.4 6E-06 1.3E-10 79.1 14.3 124 43-179 3-137 (425)
112 COG0240 GpsA Glycerol-3-phosph 98.4 8.6E-06 1.9E-10 74.9 13.9 112 46-180 1-123 (329)
113 PRK06194 hypothetical protein; 98.4 1E-05 2.2E-10 72.4 13.6 158 47-220 7-192 (287)
114 PF13460 NAD_binding_10: NADH( 98.3 3.1E-06 6.7E-11 70.7 9.3 93 49-163 1-97 (183)
115 TIGR01777 yfcH conserved hypot 98.3 2.3E-06 5E-11 76.3 9.0 98 49-155 1-102 (292)
116 COG2910 Putative NADH-flavin r 98.3 5.2E-06 1.1E-10 70.2 9.5 105 47-167 1-108 (211)
117 PLN02725 GDP-4-keto-6-deoxyman 98.3 6E-06 1.3E-10 74.3 10.7 154 50-222 1-164 (306)
118 TIGR01214 rmlD dTDP-4-dehydror 98.3 4.1E-06 8.8E-11 74.9 9.5 95 48-163 1-99 (287)
119 PLN02240 UDP-glucose 4-epimera 98.3 7.9E-06 1.7E-10 75.3 11.5 168 46-222 5-191 (352)
120 COG2085 Predicted dinucleotide 98.3 2.2E-05 4.9E-10 67.8 13.1 95 47-166 2-96 (211)
121 PRK11064 wecC UDP-N-acetyl-D-m 98.3 9.2E-06 2E-10 77.6 11.7 108 46-168 3-125 (415)
122 COG1088 RfbB dTDP-D-glucose 4, 98.3 9.9E-06 2.2E-10 73.2 11.1 174 47-220 1-184 (340)
123 COG0677 WecC UDP-N-acetyl-D-ma 98.2 2E-05 4.4E-10 73.7 12.5 123 47-182 10-148 (436)
124 PF03807 F420_oxidored: NADP o 98.2 7.1E-06 1.5E-10 61.7 7.9 94 48-165 1-96 (96)
125 PRK14619 NAD(P)H-dependent gly 98.2 1.5E-05 3.4E-10 72.9 11.6 80 44-164 2-83 (308)
126 PLN03209 translocon at the inn 98.2 9.4E-06 2E-10 79.9 10.2 115 46-163 80-207 (576)
127 PRK07201 short chain dehydroge 98.2 2.1E-05 4.5E-10 78.7 12.8 112 47-163 1-124 (657)
128 PF03446 NAD_binding_2: NAD bi 98.2 1.3E-05 2.8E-10 66.6 9.5 64 47-122 2-65 (163)
129 KOG1429 dTDP-glucose 4-6-dehyd 98.2 6E-06 1.3E-10 74.1 7.4 173 44-223 25-205 (350)
130 PRK12921 2-dehydropantoate 2-r 98.1 2.6E-05 5.6E-10 70.8 11.6 115 47-190 1-122 (305)
131 PLN02260 probable rhamnose bio 98.1 2.6E-05 5.7E-10 78.6 12.6 140 43-206 377-529 (668)
132 PRK06522 2-dehydropantoate 2-r 98.1 4.7E-05 1E-09 68.9 12.9 100 47-168 1-105 (304)
133 PTZ00345 glycerol-3-phosphate 98.1 4.9E-05 1.1E-09 71.4 13.2 76 46-122 11-101 (365)
134 PRK00094 gpsA NAD(P)H-dependen 98.1 3.9E-05 8.4E-10 70.2 12.3 100 47-167 2-109 (325)
135 PRK12320 hypothetical protein; 98.1 1.2E-05 2.6E-10 81.2 9.6 100 47-163 1-101 (699)
136 PLN02657 3,8-divinyl protochlo 98.1 3.8E-05 8.3E-10 72.7 12.6 114 44-163 58-181 (390)
137 PRK06249 2-dehydropantoate 2-r 98.1 4.4E-05 9.6E-10 70.0 12.1 121 44-191 3-127 (313)
138 TIGR03376 glycerol3P_DH glycer 98.1 6.2E-05 1.3E-09 70.2 13.0 72 48-122 1-90 (342)
139 PLN02253 xanthoxin dehydrogena 98.1 0.00011 2.3E-09 65.6 14.1 162 45-220 17-199 (280)
140 TIGR01179 galE UDP-glucose-4-e 98.1 7.4E-05 1.6E-09 67.4 13.2 167 48-222 1-180 (328)
141 PRK05865 hypothetical protein; 98.1 1.6E-05 3.4E-10 81.9 9.6 103 47-165 1-104 (854)
142 PRK06482 short chain dehydroge 98.1 0.00011 2.4E-09 65.4 14.0 144 47-207 3-166 (276)
143 PRK13394 3-hydroxybutyrate deh 98.1 0.00011 2.3E-09 64.5 13.6 146 46-207 7-175 (262)
144 PRK08229 2-dehydropantoate 2-r 98.1 8.8E-05 1.9E-09 68.5 13.4 99 46-167 2-111 (341)
145 PRK10538 malonic semialdehyde 98.0 0.0001 2.2E-09 64.7 13.0 155 47-219 1-175 (248)
146 PRK14618 NAD(P)H-dependent gly 98.0 3.7E-05 8.1E-10 70.9 10.6 72 46-122 4-82 (328)
147 PRK12829 short chain dehydroge 98.0 0.00019 4.2E-09 63.0 14.6 149 45-207 10-178 (264)
148 PRK05717 oxidoreductase; Valid 98.0 0.0001 2.2E-09 64.9 12.7 146 47-209 11-177 (255)
149 PLN00141 Tic62-NAD(P)-related 98.0 4.6E-05 9.9E-10 67.2 10.5 114 43-163 14-131 (251)
150 PRK06180 short chain dehydroge 98.0 0.00023 5.1E-09 63.5 15.2 144 47-207 5-168 (277)
151 PRK14620 NAD(P)H-dependent gly 98.0 6.3E-05 1.4E-09 69.3 11.7 100 47-167 1-110 (326)
152 PRK08643 acetoin reductase; Va 98.0 0.00043 9.3E-09 60.7 16.4 157 47-219 3-180 (256)
153 PRK07231 fabG 3-ketoacyl-(acyl 98.0 0.00012 2.5E-09 63.8 12.7 36 46-83 5-40 (251)
154 KOG1371 UDP-glucose 4-epimeras 98.0 2.6E-05 5.5E-10 71.3 8.6 168 46-222 2-187 (343)
155 PRK08267 short chain dehydroge 98.0 0.00013 2.8E-09 64.3 12.9 115 48-164 3-136 (260)
156 PRK12429 3-hydroxybutyrate deh 98.0 0.00016 3.4E-09 63.3 13.1 115 47-164 5-140 (258)
157 TIGR02197 heptose_epim ADP-L-g 98.0 6.3E-05 1.4E-09 67.9 10.8 165 49-222 1-174 (314)
158 PRK06182 short chain dehydroge 98.0 0.00023 4.9E-09 63.3 14.0 114 46-164 3-133 (273)
159 PRK07774 short chain dehydroge 98.0 0.00024 5.2E-09 61.9 13.9 155 46-219 6-183 (250)
160 PRK05993 short chain dehydroge 98.0 0.00019 4E-09 64.2 13.3 112 47-164 5-135 (277)
161 PRK07856 short chain dehydroge 97.9 0.00025 5.4E-09 62.2 13.7 146 46-209 6-168 (252)
162 PRK08278 short chain dehydroge 97.9 0.00049 1.1E-08 61.4 15.7 161 47-221 7-194 (273)
163 PRK07417 arogenate dehydrogena 97.9 7.7E-05 1.7E-09 67.3 10.4 64 47-122 1-65 (279)
164 PRK07069 short chain dehydroge 97.9 0.00026 5.7E-09 61.6 13.5 153 48-215 1-177 (251)
165 PRK09135 pteridine reductase; 97.9 0.00049 1.1E-08 59.7 14.9 148 47-208 7-175 (249)
166 PRK07067 sorbitol dehydrogenas 97.9 0.00026 5.6E-09 62.2 13.3 146 47-208 7-172 (257)
167 PRK07523 gluconate 5-dehydroge 97.9 0.00036 7.7E-09 61.3 14.1 147 46-208 10-178 (255)
168 PRK08655 prephenate dehydrogen 97.9 0.00011 2.5E-09 70.6 11.7 66 47-122 1-66 (437)
169 PRK12384 sorbitol-6-phosphate 97.9 0.00024 5.2E-09 62.5 12.9 117 47-165 3-142 (259)
170 PF01118 Semialdhyde_dh: Semia 97.9 5.5E-05 1.2E-09 59.8 8.0 111 48-194 1-113 (121)
171 PRK12439 NAD(P)H-dependent gly 97.9 0.00013 2.8E-09 67.9 11.6 114 45-180 6-129 (341)
172 PF04321 RmlD_sub_bind: RmlD s 97.9 1.1E-05 2.4E-10 73.1 4.4 151 47-224 1-157 (286)
173 KOG1430 C-3 sterol dehydrogena 97.9 7.9E-05 1.7E-09 69.6 10.1 178 45-229 3-193 (361)
174 PRK06179 short chain dehydroge 97.9 0.00018 4E-09 63.6 12.2 111 47-164 5-132 (270)
175 PRK07326 short chain dehydroge 97.9 0.00025 5.4E-09 61.3 12.7 115 46-165 6-141 (237)
176 PRK12827 short chain dehydroge 97.9 0.00044 9.5E-09 60.0 14.3 118 45-164 5-147 (249)
177 PRK06398 aldose dehydrogenase; 97.9 0.00037 7.9E-09 61.7 13.9 153 46-220 6-172 (258)
178 PRK08265 short chain dehydroge 97.9 0.00036 7.9E-09 61.7 13.8 157 46-220 6-179 (261)
179 PRK12937 short chain dehydroge 97.9 0.00039 8.5E-09 60.3 13.7 149 46-208 5-172 (245)
180 PRK07806 short chain dehydroge 97.9 0.00014 3.1E-09 63.4 10.8 163 46-219 6-181 (248)
181 COG1748 LYS9 Saccharopine dehy 97.9 0.00025 5.5E-09 66.9 13.0 75 47-123 2-77 (389)
182 PRK07985 oxidoreductase; Provi 97.9 0.00049 1.1E-08 62.4 14.6 146 47-207 50-217 (294)
183 PRK07024 short chain dehydroge 97.9 0.00025 5.3E-09 62.5 12.1 145 46-208 2-170 (257)
184 PRK06841 short chain dehydroge 97.8 0.00036 7.9E-09 61.1 12.8 149 46-208 15-180 (255)
185 PLN02688 pyrroline-5-carboxyla 97.8 0.00021 4.7E-09 63.7 11.5 66 47-122 1-69 (266)
186 PRK05875 short chain dehydroge 97.8 0.00035 7.6E-09 62.1 12.8 159 46-220 7-188 (276)
187 PRK07814 short chain dehydroge 97.8 0.00057 1.2E-08 60.4 14.0 147 46-208 10-179 (263)
188 PRK06138 short chain dehydroge 97.8 0.00033 7.1E-09 61.1 12.2 146 46-207 5-171 (252)
189 PRK12936 3-ketoacyl-(acyl-carr 97.8 0.00037 8E-09 60.4 12.4 146 46-208 6-171 (245)
190 PRK07576 short chain dehydroge 97.8 0.00048 1E-08 61.1 13.4 148 47-208 10-176 (264)
191 PF10727 Rossmann-like: Rossma 97.8 4.9E-05 1.1E-09 61.0 6.2 97 43-165 7-106 (127)
192 TIGR03206 benzo_BadH 2-hydroxy 97.8 0.00049 1.1E-08 59.9 13.2 148 46-207 3-170 (250)
193 PRK07577 short chain dehydroge 97.8 0.00029 6.3E-09 60.8 11.6 36 46-83 3-38 (234)
194 PRK08340 glucose-1-dehydrogena 97.8 0.00044 9.6E-09 60.9 13.0 155 47-217 1-177 (259)
195 TIGR00872 gnd_rel 6-phosphoglu 97.8 0.00024 5.1E-09 64.9 11.3 95 47-166 1-96 (298)
196 PRK07680 late competence prote 97.8 0.00023 5E-09 64.0 11.1 97 47-167 1-100 (273)
197 PRK07666 fabG 3-ketoacyl-(acyl 97.8 0.00075 1.6E-08 58.5 14.0 115 47-165 8-144 (239)
198 PRK06181 short chain dehydroge 97.8 0.00079 1.7E-08 59.2 14.2 115 47-165 2-138 (263)
199 PRK08263 short chain dehydroge 97.8 0.00029 6.4E-09 62.7 11.5 35 47-83 4-38 (275)
200 PRK06101 short chain dehydroge 97.8 0.00072 1.6E-08 59.0 13.7 145 48-208 3-160 (240)
201 PRK07502 cyclohexadienyl dehyd 97.8 0.00025 5.4E-09 64.8 11.2 70 46-123 6-75 (307)
202 PRK06172 short chain dehydroge 97.8 0.00067 1.4E-08 59.4 13.5 158 46-220 7-186 (253)
203 TIGR01832 kduD 2-deoxy-D-gluco 97.8 0.00076 1.6E-08 58.8 13.8 149 46-208 5-172 (248)
204 PRK08219 short chain dehydroge 97.8 0.00054 1.2E-08 58.6 12.6 74 47-125 4-82 (227)
205 TIGR01746 Thioester-redct thio 97.8 0.00022 4.7E-09 65.3 10.7 114 48-163 1-135 (367)
206 PRK07102 short chain dehydroge 97.8 0.0013 2.8E-08 57.3 15.0 115 47-164 2-135 (243)
207 PRK06128 oxidoreductase; Provi 97.8 0.0029 6.4E-08 57.2 17.9 148 46-207 55-223 (300)
208 PRK12745 3-ketoacyl-(acyl-carr 97.8 0.00079 1.7E-08 58.9 13.7 147 47-207 3-178 (256)
209 TIGR03325 BphB_TodD cis-2,3-di 97.8 0.00056 1.2E-08 60.4 12.8 155 46-220 5-183 (262)
210 PRK11559 garR tartronate semia 97.8 0.00024 5.3E-09 64.4 10.6 65 46-122 2-66 (296)
211 PRK06924 short chain dehydroge 97.8 0.00061 1.3E-08 59.5 12.8 33 48-82 3-35 (251)
212 PRK07890 short chain dehydroge 97.7 0.00032 7E-09 61.4 11.0 117 46-164 5-141 (258)
213 PRK08264 short chain dehydroge 97.7 0.00067 1.4E-08 58.7 12.9 146 46-207 6-164 (238)
214 PRK11880 pyrroline-5-carboxyla 97.7 0.00031 6.8E-09 62.7 11.0 96 46-167 2-98 (267)
215 PRK12939 short chain dehydroge 97.7 0.00054 1.2E-08 59.5 12.1 149 46-208 7-175 (250)
216 PRK06124 gluconate 5-dehydroge 97.7 0.00056 1.2E-08 60.0 12.3 118 46-165 11-148 (256)
217 PRK12828 short chain dehydroge 97.7 0.00031 6.7E-09 60.5 10.3 117 46-164 7-141 (239)
218 PRK12746 short chain dehydroge 97.7 0.0019 4.2E-08 56.4 15.6 149 46-208 6-179 (254)
219 PRK06500 short chain dehydroge 97.7 0.00079 1.7E-08 58.5 13.0 145 46-207 6-168 (249)
220 TIGR01505 tartro_sem_red 2-hyd 97.7 0.00023 5E-09 64.5 9.8 64 48-123 1-64 (291)
221 PRK08945 putative oxoacyl-(acy 97.7 0.0021 4.5E-08 56.1 15.6 160 45-220 11-194 (247)
222 COG2084 MmsB 3-hydroxyisobutyr 97.7 0.00038 8.2E-09 63.2 11.0 66 47-123 1-66 (286)
223 PRK07578 short chain dehydroge 97.7 0.00067 1.5E-08 57.4 12.0 144 47-218 1-151 (199)
224 PRK06545 prephenate dehydrogen 97.7 0.00037 8E-09 65.3 11.3 68 47-122 1-68 (359)
225 PRK08269 3-hydroxybutyryl-CoA 97.7 0.0002 4.3E-09 66.0 9.3 111 58-191 1-136 (314)
226 PRK05866 short chain dehydroge 97.7 0.0021 4.5E-08 58.3 15.8 36 46-83 40-75 (293)
227 PLN02256 arogenate dehydrogena 97.7 0.00042 9.1E-09 63.6 11.2 68 42-122 32-100 (304)
228 PRK06197 short chain dehydroge 97.7 0.00061 1.3E-08 61.8 12.2 159 46-208 16-197 (306)
229 PRK05653 fabG 3-ketoacyl-(acyl 97.7 0.00083 1.8E-08 57.9 12.6 116 46-163 5-140 (246)
230 PRK07634 pyrroline-5-carboxyla 97.7 0.00059 1.3E-08 60.0 11.8 70 45-122 3-74 (245)
231 PRK06701 short chain dehydroge 97.7 0.0014 3.1E-08 59.2 14.5 115 46-164 46-182 (290)
232 PRK07825 short chain dehydroge 97.7 0.0016 3.4E-08 57.8 14.7 114 46-165 5-138 (273)
233 PRK09009 C factor cell-cell si 97.7 0.00071 1.5E-08 58.6 12.1 155 47-216 1-175 (235)
234 PRK05876 short chain dehydroge 97.7 0.0011 2.5E-08 59.3 13.7 116 47-164 7-143 (275)
235 PRK08213 gluconate 5-dehydroge 97.7 0.0018 3.8E-08 57.0 14.7 165 45-221 11-196 (259)
236 PLN02996 fatty acyl-CoA reduct 97.7 0.00093 2E-08 65.2 14.1 107 46-153 11-150 (491)
237 PRK08642 fabG 3-ketoacyl-(acyl 97.7 0.0011 2.3E-08 57.9 13.2 147 47-209 6-179 (253)
238 PRK08226 short chain dehydroge 97.7 0.0014 2.9E-08 57.8 14.0 150 46-208 6-174 (263)
239 COG0300 DltE Short-chain dehyd 97.7 0.00091 2E-08 60.1 12.8 170 44-232 4-195 (265)
240 PRK11199 tyrA bifunctional cho 97.7 0.00027 5.8E-09 66.7 10.0 53 46-122 98-150 (374)
241 PRK12826 3-ketoacyl-(acyl-carr 97.7 0.0011 2.4E-08 57.5 13.2 114 46-164 6-142 (251)
242 PRK05557 fabG 3-ketoacyl-(acyl 97.7 0.0017 3.6E-08 56.1 14.2 117 46-164 5-142 (248)
243 TIGR01963 PHB_DH 3-hydroxybuty 97.7 0.0018 3.8E-08 56.5 14.5 114 48-164 3-137 (255)
244 TIGR03649 ergot_EASG ergot alk 97.7 0.00023 4.9E-09 63.8 9.0 97 48-163 1-104 (285)
245 PRK07023 short chain dehydroge 97.7 0.00032 6.9E-09 61.1 9.7 35 47-83 2-36 (243)
246 PRK12480 D-lactate dehydrogena 97.7 0.0005 1.1E-08 63.8 11.4 63 44-122 144-206 (330)
247 PRK06914 short chain dehydroge 97.7 0.002 4.3E-08 57.3 14.9 35 47-83 4-38 (280)
248 PRK12490 6-phosphogluconate de 97.7 0.00088 1.9E-08 61.1 12.9 64 47-122 1-67 (299)
249 PRK07060 short chain dehydroge 97.7 0.00073 1.6E-08 58.6 11.9 146 46-207 9-168 (245)
250 PLN00016 RNA-binding protein; 97.7 0.00037 8E-09 65.4 10.6 99 44-163 50-164 (378)
251 PRK12742 oxidoreductase; Provi 97.7 0.0019 4.1E-08 55.8 14.4 148 46-209 6-166 (237)
252 COG1091 RfbD dTDP-4-dehydrorha 97.7 0.00026 5.6E-09 64.1 9.0 160 47-235 1-167 (281)
253 PRK12823 benD 1,6-dihydroxycyc 97.7 0.0021 4.5E-08 56.5 14.8 146 46-208 8-174 (260)
254 PRK06196 oxidoreductase; Provi 97.7 0.0004 8.7E-09 63.4 10.5 156 46-208 26-200 (315)
255 PRK05884 short chain dehydroge 97.7 0.0016 3.5E-08 56.4 13.8 35 47-83 1-35 (223)
256 PRK12481 2-deoxy-D-gluconate 3 97.6 0.00096 2.1E-08 58.7 12.5 157 47-219 9-184 (251)
257 PRK07679 pyrroline-5-carboxyla 97.6 0.00076 1.6E-08 60.8 12.0 70 45-122 2-73 (279)
258 PRK07074 short chain dehydroge 97.6 0.0015 3.3E-08 57.2 13.7 147 47-208 3-167 (257)
259 PF02558 ApbA: Ketopantoate re 97.6 0.0004 8.6E-09 56.4 9.2 116 49-191 1-122 (151)
260 PRK12825 fabG 3-ketoacyl-(acyl 97.6 0.0012 2.6E-08 56.9 12.8 113 47-163 7-142 (249)
261 PRK05565 fabG 3-ketoacyl-(acyl 97.6 0.0012 2.7E-08 57.0 12.8 117 46-164 5-142 (247)
262 PRK06523 short chain dehydroge 97.6 0.00045 9.7E-09 60.7 10.1 152 46-219 9-180 (260)
263 TIGR01830 3oxo_ACP_reduc 3-oxo 97.6 0.0011 2.4E-08 57.1 12.4 155 49-219 1-176 (239)
264 PF05368 NmrA: NmrA-like famil 97.6 0.00027 5.9E-09 61.5 8.6 94 49-155 1-95 (233)
265 PRK12935 acetoacetyl-CoA reduc 97.6 0.0025 5.3E-08 55.5 14.7 114 47-164 7-143 (247)
266 PRK12367 short chain dehydroge 97.6 0.00083 1.8E-08 59.4 11.7 104 45-152 13-120 (245)
267 PRK08085 gluconate 5-dehydroge 97.6 0.0014 3E-08 57.5 13.0 116 47-164 10-145 (254)
268 PRK09599 6-phosphogluconate de 97.6 0.0012 2.6E-08 60.3 12.9 64 47-122 1-67 (301)
269 PRK05854 short chain dehydroge 97.6 0.00067 1.5E-08 62.0 11.3 170 46-220 14-206 (313)
270 PRK08993 2-deoxy-D-gluconate 3 97.6 0.0026 5.6E-08 55.9 14.7 157 47-219 11-186 (253)
271 PRK08220 2,3-dihydroxybenzoate 97.6 0.0011 2.4E-08 57.8 12.2 152 46-219 8-176 (252)
272 PRK05693 short chain dehydroge 97.6 0.0016 3.5E-08 57.9 13.4 112 48-164 3-130 (274)
273 PRK06171 sorbitol-6-phosphate 97.6 0.00062 1.3E-08 60.1 10.7 149 47-216 10-183 (266)
274 COG1090 Predicted nucleoside-d 97.6 0.00049 1.1E-08 61.8 9.9 103 49-162 1-109 (297)
275 PRK07063 short chain dehydroge 97.6 0.002 4.3E-08 56.7 13.8 158 46-220 7-187 (260)
276 PRK05650 short chain dehydroge 97.6 0.0018 4E-08 57.4 13.6 35 47-83 1-35 (270)
277 COG0569 TrkA K+ transport syst 97.6 0.00038 8.2E-09 61.1 8.9 71 47-123 1-75 (225)
278 PRK06949 short chain dehydroge 97.6 0.0016 3.5E-08 57.0 12.9 36 46-83 9-44 (258)
279 PRK15461 NADH-dependent gamma- 97.6 0.0004 8.8E-09 63.3 9.3 64 47-122 2-65 (296)
280 PRK08277 D-mannonate oxidoredu 97.6 0.0035 7.6E-08 55.7 15.2 36 46-83 10-45 (278)
281 PRK06113 7-alpha-hydroxysteroi 97.6 0.0018 3.9E-08 56.9 13.1 159 46-220 11-188 (255)
282 PRK07478 short chain dehydroge 97.6 0.0035 7.6E-08 54.9 14.9 148 47-208 7-176 (254)
283 PRK06928 pyrroline-5-carboxyla 97.6 0.002 4.3E-08 58.2 13.6 98 47-167 2-102 (277)
284 PRK07097 gluconate 5-dehydroge 97.6 0.0022 4.8E-08 56.7 13.7 145 47-208 11-178 (265)
285 PRK12491 pyrroline-5-carboxyla 97.6 0.00055 1.2E-08 61.8 9.8 68 46-122 2-71 (272)
286 PRK08507 prephenate dehydrogen 97.5 0.00074 1.6E-08 60.8 10.3 66 47-122 1-66 (275)
287 PRK07424 bifunctional sterol d 97.5 0.00098 2.1E-08 63.6 11.6 103 45-150 177-284 (406)
288 PRK07832 short chain dehydroge 97.5 0.0086 1.9E-07 53.2 17.1 147 47-207 1-169 (272)
289 PRK06935 2-deoxy-D-gluconate 3 97.5 0.0018 3.9E-08 57.0 12.6 153 46-216 15-188 (258)
290 PRK09072 short chain dehydroge 97.5 0.0022 4.8E-08 56.5 13.2 114 46-164 5-139 (263)
291 PRK06198 short chain dehydroge 97.5 0.004 8.6E-08 54.6 14.7 147 46-208 6-176 (260)
292 PRK06463 fabG 3-ketoacyl-(acyl 97.5 0.0033 7.1E-08 55.2 14.2 158 46-220 7-181 (255)
293 PRK07109 short chain dehydroge 97.5 0.0025 5.5E-08 58.9 14.0 35 47-83 9-43 (334)
294 PRK05708 2-dehydropantoate 2-r 97.5 0.0015 3.3E-08 59.7 12.4 117 46-191 2-125 (305)
295 PRK06077 fabG 3-ketoacyl-(acyl 97.5 0.0034 7.3E-08 54.6 14.0 148 47-208 7-173 (252)
296 PRK08628 short chain dehydroge 97.5 0.0037 7.9E-08 54.8 14.2 115 47-163 8-139 (258)
297 PRK08818 prephenate dehydrogen 97.5 0.00096 2.1E-08 62.8 10.9 55 46-122 4-59 (370)
298 PRK06200 2,3-dihydroxy-2,3-dih 97.5 0.002 4.2E-08 56.9 12.4 156 46-220 6-184 (263)
299 PRK08177 short chain dehydroge 97.5 0.0026 5.6E-08 54.8 12.9 158 48-220 3-176 (225)
300 PRK12747 short chain dehydroge 97.5 0.0059 1.3E-07 53.4 15.3 149 46-208 4-177 (252)
301 PRK08589 short chain dehydroge 97.5 0.0032 6.9E-08 56.1 13.8 155 46-218 6-181 (272)
302 PRK09134 short chain dehydroge 97.5 0.0028 6.1E-08 55.7 13.3 157 46-221 9-188 (258)
303 TIGR02415 23BDH acetoin reduct 97.5 0.0026 5.6E-08 55.5 12.9 33 48-82 2-34 (254)
304 PRK05855 short chain dehydroge 97.5 0.0031 6.7E-08 61.6 14.8 160 44-219 313-493 (582)
305 PTZ00142 6-phosphogluconate de 97.5 0.00088 1.9E-08 65.0 10.7 100 47-167 2-105 (470)
306 PRK07035 short chain dehydroge 97.5 0.0024 5.2E-08 55.8 12.6 148 47-208 9-177 (252)
307 PRK09291 short chain dehydroge 97.5 0.0029 6.4E-08 55.3 13.2 77 47-125 3-84 (257)
308 PRK13243 glyoxylate reductase; 97.5 0.00071 1.5E-08 62.8 9.5 97 44-167 148-246 (333)
309 PRK05786 fabG 3-ketoacyl-(acyl 97.5 0.0014 3E-08 56.7 10.7 35 47-83 6-40 (238)
310 PRK07574 formate dehydrogenase 97.4 0.0017 3.6E-08 61.5 11.8 108 31-163 176-284 (385)
311 PRK12743 oxidoreductase; Provi 97.4 0.012 2.5E-07 51.8 16.6 148 47-208 3-172 (256)
312 PRK08339 short chain dehydroge 97.4 0.0048 1E-07 54.8 14.2 152 47-216 9-182 (263)
313 PF01113 DapB_N: Dihydrodipico 97.4 0.0016 3.5E-08 51.7 10.0 72 47-122 1-75 (124)
314 COG4221 Short-chain alcohol de 97.4 0.0085 1.8E-07 53.0 15.2 157 47-220 7-182 (246)
315 PRK12744 short chain dehydroge 97.4 0.005 1.1E-07 54.1 14.1 148 46-208 8-178 (257)
316 KOG2666 UDP-glucose/GDP-mannos 97.4 0.00024 5.2E-09 64.8 5.6 75 47-126 2-90 (481)
317 PRK06057 short chain dehydroge 97.4 0.0042 9E-08 54.5 13.6 36 46-83 7-42 (255)
318 PLN02780 ketoreductase/ oxidor 97.4 0.0032 6.9E-08 58.0 13.2 150 47-208 54-227 (320)
319 PRK07453 protochlorophyllide o 97.4 0.0013 2.8E-08 60.1 10.6 36 46-83 6-41 (322)
320 PF07993 NAD_binding_4: Male s 97.4 0.0015 3.3E-08 57.6 10.7 168 51-220 1-200 (249)
321 PLN02712 arogenate dehydrogena 97.4 0.0012 2.6E-08 66.8 11.1 67 43-122 49-116 (667)
322 PRK15059 tartronate semialdehy 97.4 0.00084 1.8E-08 61.2 9.1 64 47-123 1-64 (292)
323 PRK08217 fabG 3-ketoacyl-(acyl 97.4 0.0037 7.9E-08 54.3 12.6 36 46-83 5-40 (253)
324 PRK08063 enoyl-(acyl carrier p 97.4 0.0081 1.8E-07 52.2 14.9 147 47-207 5-172 (250)
325 TIGR02632 RhaD_aldol-ADH rhamn 97.4 0.0037 8E-08 63.4 14.3 150 46-209 414-586 (676)
326 PRK14982 acyl-ACP reductase; P 97.4 0.0012 2.6E-08 61.5 9.9 72 45-126 154-227 (340)
327 PRK06483 dihydromonapterin red 97.4 0.0039 8.4E-08 54.0 12.7 148 46-208 2-167 (236)
328 COG1893 ApbA Ketopantoate redu 97.4 0.0015 3.3E-08 60.0 10.5 118 47-192 1-124 (307)
329 PRK08251 short chain dehydroge 97.4 0.015 3.2E-07 50.6 16.3 35 47-83 3-37 (248)
330 PF02826 2-Hacid_dh_C: D-isome 97.4 0.00084 1.8E-08 56.6 8.1 96 43-164 33-128 (178)
331 PRK09242 tropinone reductase; 97.4 0.0028 6.1E-08 55.6 11.8 148 46-207 9-178 (257)
332 PRK15469 ghrA bifunctional gly 97.4 0.0022 4.8E-08 59.0 11.5 92 45-163 135-226 (312)
333 PRK06550 fabG 3-ketoacyl-(acyl 97.4 0.0034 7.3E-08 54.2 12.1 143 47-208 6-159 (235)
334 PRK07454 short chain dehydroge 97.4 0.0033 7.2E-08 54.5 12.1 34 47-82 7-40 (241)
335 PRK08605 D-lactate dehydrogena 97.4 0.00087 1.9E-08 62.2 8.8 65 44-123 144-209 (332)
336 PRK08936 glucose-1-dehydrogena 97.4 0.008 1.7E-07 52.9 14.6 156 46-219 7-186 (261)
337 COG1712 Predicted dinucleotide 97.4 0.0017 3.7E-08 56.7 9.8 68 47-123 1-69 (255)
338 PRK07792 fabG 3-ketoacyl-(acyl 97.3 0.0049 1.1E-07 56.1 13.4 101 46-150 12-131 (306)
339 PRK05867 short chain dehydroge 97.3 0.0055 1.2E-07 53.7 13.2 156 47-219 10-189 (253)
340 PRK08703 short chain dehydroge 97.3 0.0068 1.5E-07 52.6 13.6 151 46-210 6-181 (239)
341 PRK06476 pyrroline-5-carboxyla 97.3 0.0017 3.6E-08 57.9 9.9 68 47-122 1-69 (258)
342 PRK06139 short chain dehydroge 97.3 0.0071 1.5E-07 56.0 14.4 116 46-164 7-143 (330)
343 PLN02503 fatty acyl-CoA reduct 97.3 0.0027 5.7E-08 63.5 12.1 107 46-153 119-257 (605)
344 PRK07775 short chain dehydroge 97.3 0.0081 1.8E-07 53.5 14.1 147 45-207 9-177 (274)
345 PRK06123 short chain dehydroge 97.3 0.012 2.6E-07 51.1 14.9 146 48-207 4-175 (248)
346 PRK08261 fabG 3-ketoacyl-(acyl 97.3 0.0056 1.2E-07 58.7 13.8 117 46-164 210-343 (450)
347 PTZ00431 pyrroline carboxylate 97.3 0.0022 4.8E-08 57.3 10.2 90 46-167 3-94 (260)
348 COG0287 TyrA Prephenate dehydr 97.3 0.0041 8.8E-08 56.4 11.9 65 46-123 3-73 (279)
349 TIGR02354 thiF_fam2 thiamine b 97.3 0.0031 6.8E-08 54.3 10.8 36 44-81 19-54 (200)
350 PRK07904 short chain dehydroge 97.3 0.01 2.2E-07 52.4 14.3 116 45-164 7-146 (253)
351 PRK05479 ketol-acid reductoiso 97.3 0.0032 6.8E-08 58.4 11.2 68 43-122 14-81 (330)
352 PRK06114 short chain dehydroge 97.3 0.0085 1.8E-07 52.6 13.6 34 47-82 9-42 (254)
353 PRK08017 oxidoreductase; Provi 97.3 0.01 2.2E-07 51.8 13.9 33 48-82 4-36 (256)
354 PRK14194 bifunctional 5,10-met 97.2 0.0017 3.8E-08 59.3 9.1 57 44-125 157-213 (301)
355 PF01488 Shikimate_DH: Shikima 97.2 0.0014 2.9E-08 52.9 7.6 77 44-125 10-86 (135)
356 KOG2305 3-hydroxyacyl-CoA dehy 97.2 0.00077 1.7E-08 59.0 6.4 105 47-170 4-125 (313)
357 PRK06947 glucose-1-dehydrogena 97.2 0.0094 2E-07 51.8 13.5 32 47-80 3-34 (248)
358 PLN03139 formate dehydrogenase 97.2 0.0039 8.4E-08 59.1 11.7 95 44-163 197-291 (386)
359 PRK12824 acetoacetyl-CoA reduc 97.2 0.0054 1.2E-07 53.0 11.7 34 47-82 3-36 (245)
360 PRK12938 acetyacetyl-CoA reduc 97.2 0.011 2.5E-07 51.2 13.8 31 47-79 4-34 (246)
361 PRK06484 short chain dehydroge 97.2 0.0075 1.6E-07 58.7 13.9 147 46-208 269-433 (520)
362 PRK09186 flagellin modificatio 97.2 0.0023 5E-08 55.9 9.3 36 46-83 4-39 (256)
363 PRK08324 short chain dehydroge 97.2 0.0077 1.7E-07 61.1 14.3 148 46-208 422-590 (681)
364 PLN02712 arogenate dehydrogena 97.2 0.0029 6.2E-08 64.1 11.1 67 43-122 366-433 (667)
365 PRK06953 short chain dehydroge 97.2 0.0037 8.1E-08 53.7 10.4 113 48-164 3-130 (222)
366 cd01065 NAD_bind_Shikimate_DH 97.2 0.0012 2.5E-08 53.7 6.7 74 44-125 17-92 (155)
367 TIGR01831 fabG_rel 3-oxoacyl-( 97.2 0.011 2.4E-07 51.1 13.1 114 49-166 1-138 (239)
368 KOG0409 Predicted dehydrogenas 97.2 0.0036 7.7E-08 56.9 10.1 96 46-153 35-147 (327)
369 PRK14806 bifunctional cyclohex 97.1 0.0091 2E-07 61.0 14.3 93 47-163 4-97 (735)
370 PLN02350 phosphogluconate dehy 97.1 0.0033 7.1E-08 61.4 10.3 72 46-122 6-80 (493)
371 PRK05872 short chain dehydroge 97.1 0.006 1.3E-07 55.2 11.5 117 46-164 9-143 (296)
372 COG0702 Predicted nucleoside-d 97.1 0.0012 2.7E-08 58.0 6.4 74 47-125 1-74 (275)
373 TIGR00873 gnd 6-phosphoglucona 97.1 0.0036 7.8E-08 60.8 10.0 95 48-165 1-100 (467)
374 TIGR01829 AcAcCoA_reduct aceto 97.1 0.023 4.9E-07 49.0 14.2 31 48-80 2-32 (242)
375 PRK07677 short chain dehydroge 97.1 0.0064 1.4E-07 53.2 10.8 146 47-208 2-170 (252)
376 TIGR02685 pter_reduc_Leis pter 97.1 0.029 6.3E-07 49.6 15.1 32 48-81 3-34 (267)
377 TIGR01692 HIBADH 3-hydroxyisob 97.1 0.0034 7.4E-08 56.9 9.2 61 51-123 1-61 (288)
378 PRK13581 D-3-phosphoglycerate 97.1 0.0032 6.8E-08 62.1 9.6 66 44-123 138-203 (526)
379 TIGR01327 PGDH D-3-phosphoglyc 97.1 0.004 8.6E-08 61.4 10.2 67 44-123 136-202 (525)
380 COG0345 ProC Pyrroline-5-carbo 97.0 0.012 2.5E-07 53.1 12.2 96 47-167 2-99 (266)
381 KOG4039 Serine/threonine kinas 97.0 0.0022 4.8E-08 54.2 7.1 118 43-167 15-135 (238)
382 TIGR01724 hmd_rel H2-forming N 97.0 0.0068 1.5E-07 55.8 10.8 150 47-224 1-202 (341)
383 cd01078 NAD_bind_H4MPT_DH NADP 97.0 0.0023 4.9E-08 54.5 7.2 77 45-124 27-107 (194)
384 PLN02968 Probable N-acetyl-gam 97.0 0.002 4.3E-08 61.0 7.3 77 44-123 36-113 (381)
385 PRK08416 7-alpha-hydroxysteroi 97.0 0.058 1.3E-06 47.5 16.3 34 46-81 8-41 (260)
386 TIGR00465 ilvC ketol-acid redu 97.0 0.0073 1.6E-07 55.7 10.8 66 45-122 2-67 (314)
387 PRK07201 short chain dehydroge 97.0 0.011 2.3E-07 59.3 12.9 114 46-164 371-509 (657)
388 cd00401 AdoHcyase S-adenosyl-L 97.0 0.0062 1.3E-07 58.2 10.6 89 45-165 201-291 (413)
389 PRK07062 short chain dehydroge 97.0 0.058 1.3E-06 47.4 16.2 35 47-83 9-43 (265)
390 TIGR01850 argC N-acetyl-gamma- 97.0 0.0026 5.7E-08 59.3 7.8 74 47-123 1-77 (346)
391 COG0111 SerA Phosphoglycerate 97.0 0.0043 9.4E-08 57.4 9.1 80 29-122 126-205 (324)
392 PRK08306 dipicolinate synthase 97.0 0.006 1.3E-07 55.7 9.8 68 44-122 150-218 (296)
393 PRK14874 aspartate-semialdehyd 96.9 0.0021 4.6E-08 59.7 6.8 71 47-124 2-73 (334)
394 PTZ00075 Adenosylhomocysteinas 96.9 0.005 1.1E-07 59.6 9.2 92 44-165 252-343 (476)
395 PRK05476 S-adenosyl-L-homocyst 96.9 0.0071 1.5E-07 58.0 10.1 66 45-123 211-276 (425)
396 PRK07791 short chain dehydroge 96.9 0.019 4.1E-07 51.7 12.5 35 46-82 6-40 (286)
397 cd05213 NAD_bind_Glutamyl_tRNA 96.9 0.0082 1.8E-07 55.2 10.2 102 44-168 176-278 (311)
398 PRK15438 erythronate-4-phospha 96.9 0.0044 9.6E-08 58.5 8.6 63 44-123 114-176 (378)
399 PF02882 THF_DHG_CYH_C: Tetrah 96.9 0.0053 1.1E-07 51.2 8.1 56 45-125 35-90 (160)
400 PLN02928 oxidoreductase family 96.9 0.0053 1.1E-07 57.4 9.1 104 44-163 157-262 (347)
401 PRK12549 shikimate 5-dehydroge 96.9 0.0054 1.2E-07 55.7 8.9 73 45-122 126-200 (284)
402 PRK07831 short chain dehydroge 96.9 0.11 2.3E-06 45.7 17.0 159 46-220 17-199 (262)
403 PLN02383 aspartate semialdehyd 96.9 0.0028 6E-08 59.2 6.9 74 44-124 5-79 (344)
404 COG0136 Asd Aspartate-semialde 96.8 0.006 1.3E-07 56.4 8.8 73 46-123 1-75 (334)
405 TIGR02853 spore_dpaA dipicolin 96.8 0.0062 1.3E-07 55.4 8.8 97 44-168 149-246 (287)
406 PRK06940 short chain dehydroge 96.8 0.034 7.3E-07 49.7 13.5 111 48-163 4-125 (275)
407 TIGR00936 ahcY adenosylhomocys 96.8 0.01 2.2E-07 56.6 10.5 67 44-123 193-259 (406)
408 PRK09496 trkA potassium transp 96.8 0.0076 1.6E-07 57.7 9.8 71 47-122 1-73 (453)
409 PRK08862 short chain dehydroge 96.8 0.066 1.4E-06 46.6 14.9 35 47-83 6-40 (227)
410 KOG1205 Predicted dehydrogenas 96.8 0.058 1.3E-06 49.0 14.7 118 46-167 12-153 (282)
411 PRK08040 putative semialdehyde 96.8 0.0027 5.8E-08 59.1 6.2 71 45-123 3-75 (336)
412 TIGR01745 asd_gamma aspartate- 96.8 0.0059 1.3E-07 57.3 8.4 71 47-123 1-73 (366)
413 PRK13302 putative L-aspartate 96.8 0.0047 1E-07 55.7 7.5 70 44-123 4-76 (271)
414 cd01487 E1_ThiF_like E1_ThiF_l 96.8 0.015 3.3E-07 48.9 10.1 33 48-82 1-33 (174)
415 PRK00257 erythronate-4-phospha 96.8 0.0057 1.2E-07 57.9 8.3 63 44-123 114-176 (381)
416 PRK03659 glutathione-regulated 96.8 0.019 4.1E-07 57.5 12.4 138 46-215 400-542 (601)
417 PRK00048 dihydrodipicolinate r 96.7 0.0053 1.1E-07 54.9 7.5 68 46-122 1-68 (257)
418 PRK13304 L-aspartate dehydroge 96.7 0.014 2.9E-07 52.5 10.1 68 47-123 2-70 (265)
419 cd05212 NAD_bind_m-THF_DH_Cycl 96.7 0.0083 1.8E-07 48.9 7.9 57 44-125 26-82 (140)
420 PRK06484 short chain dehydroge 96.7 0.026 5.7E-07 54.9 12.8 147 46-207 5-172 (520)
421 PRK15409 bifunctional glyoxyla 96.7 0.009 1.9E-07 55.3 9.0 94 43-163 142-236 (323)
422 PRK12557 H(2)-dependent methyl 96.7 0.019 4.2E-07 53.5 11.3 56 58-122 31-89 (342)
423 cd05311 NAD_bind_2_malic_enz N 96.7 0.025 5.4E-07 49.7 11.3 99 45-168 24-133 (226)
424 cd05312 NAD_bind_1_malic_enz N 96.7 0.023 4.9E-07 51.5 11.1 101 46-167 25-144 (279)
425 PRK06125 short chain dehydroge 96.7 0.25 5.4E-06 43.3 17.8 115 46-164 7-140 (259)
426 PRK05599 hypothetical protein; 96.7 0.14 3E-06 44.8 16.1 155 47-219 1-178 (246)
427 COG0002 ArgC Acetylglutamate s 96.7 0.0047 1E-07 57.2 6.8 74 46-122 2-78 (349)
428 TIGR00518 alaDH alanine dehydr 96.7 0.0089 1.9E-07 56.3 8.8 77 43-125 164-241 (370)
429 PRK06079 enoyl-(acyl carrier p 96.7 0.028 6E-07 49.5 11.5 157 47-220 8-186 (252)
430 PRK05671 aspartate-semialdehyd 96.7 0.005 1.1E-07 57.3 6.9 71 46-123 4-75 (336)
431 PF07991 IlvN: Acetohydroxy ac 96.7 0.0098 2.1E-07 49.6 7.9 65 46-122 4-68 (165)
432 PLN02494 adenosylhomocysteinas 96.6 0.016 3.5E-07 56.1 10.4 90 45-165 253-343 (477)
433 PRK06728 aspartate-semialdehyd 96.6 0.004 8.6E-08 58.2 6.1 72 45-123 4-77 (347)
434 PF03435 Saccharop_dh: Sacchar 96.6 0.0023 4.9E-08 60.3 4.5 74 49-125 1-78 (386)
435 COG1052 LdhA Lactate dehydroge 96.6 0.016 3.5E-07 53.7 9.9 93 44-163 144-236 (324)
436 PF03949 Malic_M: Malic enzyme 96.6 0.0058 1.2E-07 54.6 6.7 101 47-167 26-145 (255)
437 TIGR01500 sepiapter_red sepiap 96.6 0.033 7.1E-07 48.9 11.5 156 48-219 2-192 (256)
438 PRK06436 glycerate dehydrogena 96.6 0.013 2.8E-07 53.8 9.0 94 44-167 120-215 (303)
439 cd00762 NAD_bind_malic_enz NAD 96.6 0.01 2.2E-07 53.0 8.0 102 46-167 25-145 (254)
440 COG0686 Ald Alanine dehydrogen 96.6 0.01 2.2E-07 54.3 8.0 111 3-125 131-242 (371)
441 PRK07533 enoyl-(acyl carrier p 96.6 0.17 3.8E-06 44.5 15.9 158 47-220 11-191 (258)
442 PRK09730 putative NAD(P)-bindi 96.5 0.029 6.3E-07 48.5 10.6 32 48-81 3-35 (247)
443 PRK06598 aspartate-semialdehyd 96.5 0.015 3.2E-07 54.8 9.2 71 47-123 2-74 (369)
444 PRK08644 thiamine biosynthesis 96.5 0.026 5.6E-07 49.1 10.2 37 44-82 26-62 (212)
445 PRK06505 enoyl-(acyl carrier p 96.5 0.15 3.3E-06 45.4 15.5 156 47-218 8-186 (271)
446 PRK07984 enoyl-(acyl carrier p 96.5 0.08 1.7E-06 47.1 13.5 158 47-220 7-188 (262)
447 cd01079 NAD_bind_m-THF_DH NAD 96.5 0.01 2.2E-07 51.0 7.2 76 44-125 60-137 (197)
448 PF02254 TrkA_N: TrkA-N domain 96.5 0.024 5.2E-07 43.7 8.8 91 49-163 1-96 (116)
449 PRK12748 3-ketoacyl-(acyl-carr 96.5 0.18 4E-06 44.0 15.5 33 47-81 6-40 (256)
450 KOG1201 Hydroxysteroid 17-beta 96.5 0.16 3.4E-06 46.3 15.1 115 46-163 38-172 (300)
451 PRK07889 enoyl-(acyl carrier p 96.5 0.23 4.9E-06 43.8 16.1 34 47-82 8-43 (256)
452 PRK06932 glycerate dehydrogena 96.5 0.011 2.4E-07 54.4 7.9 89 44-163 145-233 (314)
453 PRK07041 short chain dehydroge 96.5 0.016 3.5E-07 49.7 8.5 110 50-163 1-123 (230)
454 PRK08410 2-hydroxyacid dehydro 96.5 0.011 2.4E-07 54.4 7.8 90 44-163 143-232 (311)
455 cd01080 NAD_bind_m-THF_DH_Cycl 96.5 0.011 2.5E-07 49.5 7.2 56 44-125 42-98 (168)
456 PRK14179 bifunctional 5,10-met 96.4 0.0093 2E-07 54.2 7.0 57 44-125 156-212 (284)
457 PRK14175 bifunctional 5,10-met 96.4 0.012 2.5E-07 53.6 7.6 57 44-125 156-212 (286)
458 PRK12475 thiamine/molybdopteri 96.4 0.011 2.4E-07 55.0 7.6 37 44-82 22-58 (338)
459 PRK08303 short chain dehydroge 96.4 0.086 1.9E-06 48.1 13.3 35 46-82 8-42 (305)
460 PRK03562 glutathione-regulated 96.4 0.042 9.2E-07 55.3 12.1 137 46-214 400-541 (621)
461 PRK14106 murD UDP-N-acetylmura 96.4 0.032 7E-07 53.4 10.9 122 46-179 5-132 (450)
462 PRK11790 D-3-phosphoglycerate 96.4 0.025 5.4E-07 54.1 9.9 63 44-122 149-211 (409)
463 PRK14192 bifunctional 5,10-met 96.4 0.013 2.8E-07 53.3 7.6 57 44-125 157-213 (283)
464 TIGR03443 alpha_am_amid L-amin 96.4 0.052 1.1E-06 59.1 13.6 118 45-163 970-1109(1389)
465 KOG2711 Glycerol-3-phosphate d 96.3 0.079 1.7E-06 49.1 12.3 127 43-186 18-167 (372)
466 PRK07370 enoyl-(acyl carrier p 96.3 0.13 2.9E-06 45.3 13.7 154 47-219 7-189 (258)
467 PF00670 AdoHcyase_NAD: S-aden 96.3 0.011 2.4E-07 49.3 6.3 67 45-124 22-88 (162)
468 PRK08159 enoyl-(acyl carrier p 96.3 0.34 7.3E-06 43.2 16.4 160 44-219 8-190 (272)
469 PRK14188 bifunctional 5,10-met 96.3 0.014 3.1E-07 53.3 7.5 57 44-125 156-212 (296)
470 PRK00436 argC N-acetyl-gamma-g 96.3 0.015 3.3E-07 54.2 7.9 34 46-80 2-36 (343)
471 PRK14189 bifunctional 5,10-met 96.3 0.015 3.2E-07 52.9 7.5 57 44-125 156-212 (285)
472 TIGR02356 adenyl_thiF thiazole 96.3 0.029 6.4E-07 48.3 9.0 37 44-82 19-55 (202)
473 smart00859 Semialdhyde_dh Semi 96.3 0.058 1.3E-06 42.2 10.0 72 48-123 1-74 (122)
474 PF01262 AlaDh_PNT_C: Alanine 96.3 0.0034 7.3E-08 52.4 3.0 38 42-82 16-53 (168)
475 PLN02306 hydroxypyruvate reduc 96.3 0.034 7.4E-07 52.7 10.1 103 44-163 163-272 (386)
476 PF00106 adh_short: short chai 96.3 0.051 1.1E-06 44.1 10.0 116 48-167 2-138 (167)
477 PRK06603 enoyl-(acyl carrier p 96.3 0.18 4E-06 44.5 14.3 157 47-219 9-188 (260)
478 PRK00421 murC UDP-N-acetylmura 96.2 0.05 1.1E-06 52.6 11.4 72 45-126 6-78 (461)
479 PRK14173 bifunctional 5,10-met 96.2 0.016 3.4E-07 52.7 7.4 57 44-125 153-209 (287)
480 PLN02858 fructose-bisphosphate 96.2 0.026 5.6E-07 61.6 10.2 66 46-123 4-69 (1378)
481 PRK06718 precorrin-2 dehydroge 96.2 0.092 2E-06 45.3 11.8 71 45-123 9-79 (202)
482 PRK06487 glycerate dehydrogena 96.2 0.019 4E-07 53.0 7.9 88 44-163 146-233 (317)
483 PRK06719 precorrin-2 dehydroge 96.2 0.06 1.3E-06 44.6 10.1 68 44-122 11-78 (157)
484 smart00822 PKS_KR This enzymat 96.2 0.035 7.7E-07 44.6 8.7 112 48-163 2-135 (180)
485 PRK10669 putative cation:proto 96.2 0.027 5.9E-07 55.8 9.5 97 46-165 417-518 (558)
486 PRK13403 ketol-acid reductoiso 96.2 0.018 3.8E-07 53.3 7.4 67 43-122 13-79 (335)
487 TIGR01289 LPOR light-dependent 96.2 0.046 9.9E-07 50.0 10.3 113 47-163 4-142 (314)
488 PRK07688 thiamine/molybdopteri 96.2 0.034 7.3E-07 51.9 9.5 37 44-82 22-58 (339)
489 PRK06444 prephenate dehydrogen 96.2 0.01 2.3E-07 51.1 5.6 31 47-79 1-31 (197)
490 PLN02858 fructose-bisphosphate 96.2 0.035 7.5E-07 60.6 10.8 66 47-124 325-390 (1378)
491 PRK14172 bifunctional 5,10-met 96.2 0.019 4.1E-07 52.0 7.4 57 44-125 156-212 (278)
492 cd00757 ThiF_MoeB_HesA_family 96.2 0.017 3.7E-07 50.6 7.0 37 44-82 19-55 (228)
493 PRK08594 enoyl-(acyl carrier p 96.1 0.33 7.2E-06 42.8 15.3 157 47-219 8-189 (257)
494 PRK14190 bifunctional 5,10-met 96.1 0.019 4.1E-07 52.2 7.3 57 44-125 156-212 (284)
495 TIGR01296 asd_B aspartate-semi 96.1 0.0089 1.9E-07 55.7 5.2 70 48-124 1-71 (339)
496 PRK14177 bifunctional 5,10-met 96.1 0.02 4.4E-07 52.0 7.4 57 44-125 157-213 (284)
497 PRK08291 ectoine utilization p 96.1 0.029 6.2E-07 52.0 8.5 73 46-124 132-207 (330)
498 PRK14187 bifunctional 5,10-met 96.1 0.021 4.5E-07 52.2 7.3 57 44-125 158-214 (294)
499 PRK14180 bifunctional 5,10-met 96.1 0.022 4.7E-07 51.8 7.4 57 44-125 156-212 (282)
500 PRK14169 bifunctional 5,10-met 96.1 0.022 4.8E-07 51.7 7.4 57 44-125 154-210 (282)
No 1
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=1e-50 Score=370.04 Aligned_cols=216 Identities=70% Similarity=1.110 Sum_probs=197.9
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCCCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPR 126 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag~~~ 126 (270)
|||+|||++|+||+++|+.|+.+++++|++|+|++..+|+++||.|......+.....++|+.++++|||+||+++|.++
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~~a~g~alDL~~~~~~~~i~~~~~~~~~y~~~~daDivvitaG~~~ 80 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIVNTPGVAADLSHINTPAKVTGYLGPEELKKALKGADVVVIPAGVPR 80 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecCccceeehHhHhCCCcceEEEecCCCchHHhcCCCCEEEEeCCCCC
Confidence 79999998899999999999999999999999998668899999998633344322133455689999999999999999
Q ss_pred CCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeeeechhhHHHHHHHHHHH
Q 024248 127 KPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGVTMLDVVRANTFVAEV 206 (270)
Q Consensus 127 ~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG~t~ldt~r~~~~lA~~ 206 (270)
++|++|+|++..|.++++++++.+++++|++++|++|||+|.+++++++++++.++||++||+|+|.|||+|+++++|++
T Consensus 81 k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvtNPvDv~~~i~t~~~~~~s~~p~~rviG~~~LDs~R~~~~la~~ 160 (310)
T cd01337 81 KPGMTRDDLFNINAGIVRDLATAVAKACPKALILIISNPVNSTVPIAAEVLKKAGVYDPKRLFGVTTLDVVRANTFVAEL 160 (310)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCchhhHHHHHHHHHHHhcCCCHHHEEeeechHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999889999999999999
Q ss_pred hCCCCCccceEEEccC-CCCceeeccccccCCCCCChhHHHHHHHHHHhhHHHHHhhc
Q 024248 207 LGLDPREVDVPVVGGH-AGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEVI 263 (270)
Q Consensus 207 l~v~~~~v~~~V~G~h-g~~~~vp~~S~~~p~~~~~~~~~~~i~~~v~~~~~~i~~~k 263 (270)
+|+++++|+++||||| |+ ++||+||++.|+.+++++++++|.++|+++|++|+++|
T Consensus 161 l~v~~~~V~~~v~GeHsGd-s~vp~~S~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~k 217 (310)
T cd01337 161 LGLDPAKVNVPVIGGHSGV-TILPLLSQCQPPFTFDQEEIEALTHRIQFGGDEVVKAK 217 (310)
T ss_pred hCcCHHHEEEEEEecCCCC-ceecccccccccccCCHHHHHHHHHHHHHHHHHHHhCc
Confidence 9999999999999999 67 79999999998766776678999999999999999986
No 2
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.
Probab=100.00 E-value=2.7e-49 Score=361.20 Aligned_cols=216 Identities=63% Similarity=1.027 Sum_probs=193.7
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCCCCCC
Q 024248 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRK 127 (270)
Q Consensus 48 KI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag~~~~ 127 (270)
||+|||++|.||+++|+.|+.+++++|++|+|+++..|+++||.|......+..+...+++.++++|||+||+++|.+++
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~a~DL~~~~~~~~i~~~~~~~~~~~~~~daDivvitaG~~~~ 80 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVAADLSHIPTAASVKGFSGEEGLENALKGADVVVIPAGVPRK 80 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEEEchhhcCCcCceEEEecCCCchHHHcCCCCEEEEeCCCCCC
Confidence 79999988999999999999999999999999988788999999975322232111122445899999999999999999
Q ss_pred CCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeeeechhhHHHHHHHHHHHh
Q 024248 128 PGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGVTMLDVVRANTFVAEVL 207 (270)
Q Consensus 128 ~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG~t~ldt~r~~~~lA~~l 207 (270)
+|++|++++..|+++++++++.+.+++|+++++++|||+|.+++++++++++.+|||++||||++.|||+||++++|+++
T Consensus 81 ~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvsNPvDv~~~i~t~~~~~~sg~p~~rViG~g~LDsaR~r~~la~~l 160 (312)
T TIGR01772 81 PGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVITNPVNSTVPIAAEVLKKKGVYDPNKLFGVTTLDIVRANTFVAELK 160 (312)
T ss_pred CCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEecCchhhHHHHHHHHHHHhcCCChHHEEeeecchHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999998899999999999999
Q ss_pred CCCCCccceEEEccCCCCceeeccccccCCCCCChhHHHHHHHHHHhhHHHHHhhc
Q 024248 208 GLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEVI 263 (270)
Q Consensus 208 ~v~~~~v~~~V~G~hg~~~~vp~~S~~~p~~~~~~~~~~~i~~~v~~~~~~i~~~k 263 (270)
|++|++++++||||||++++||+||+++....++++++++|.++|+++|++|+++|
T Consensus 161 ~v~~~~v~~~ViGeHg~~s~vp~~S~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~k 216 (312)
T TIGR01772 161 GKDPMEVNVPVIGGHSGETIIPLISQCPGKVLFTEDQLEALIHRIQNAGTEVVKAK 216 (312)
T ss_pred CCCHHHeEEEEEEecCCCccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCc
Confidence 99999999999999998689999999973223555668999999999999999985
No 3
>PLN00106 malate dehydrogenase
Probab=100.00 E-value=1.2e-48 Score=358.36 Aligned_cols=230 Identities=77% Similarity=1.203 Sum_probs=211.2
Q ss_pred cccccccCCCCCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhC
Q 024248 34 GRMDCRAKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALT 113 (270)
Q Consensus 34 ~~~~~~~~~~~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~ 113 (270)
+-+.||++++..+.||+|||++|+||+++++.|+.+++++|++|+|+++..++++||.|+.....+..+..++|+.++++
T Consensus 6 ~~~~~~~~~~~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~ 85 (323)
T PLN00106 6 SLRACRAKGGAPGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALK 85 (323)
T ss_pred hhhccccccCCCCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcC
Confidence 34578887777778999999889999999999999999999999999887888999999865445544445677889999
Q ss_pred CCCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeeeech
Q 024248 114 GMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGVTM 193 (270)
Q Consensus 114 ~ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG~t~ 193 (270)
|||+||+++|.+++++++|.+++..|.++++++++.+++++|+++++++|||+|.+++++++++++.+++|++|+||++.
T Consensus 86 ~aDiVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD~~~~i~t~~~~~~s~~p~~~viG~~~ 165 (323)
T PLN00106 86 GADLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVNSTVPIAAEVLKKAGVYDPKKLFGVTT 165 (323)
T ss_pred CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCCCCcceEEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred hhHHHHHHHHHHHhCCCCCccceEEEccCCCCceeeccccccCCCCCChhHHHHHHHHHHhhHHHHHhhc
Q 024248 194 LDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEVI 263 (270)
Q Consensus 194 ldt~r~~~~lA~~l~v~~~~v~~~V~G~hg~~~~vp~~S~~~p~~~~~~~~~~~i~~~v~~~~~~i~~~k 263 (270)
||++||++++|+++|+++.+|+++|+||||++++||+||++.|..+++++++++|.++|+++|++|+++|
T Consensus 166 LDs~Rl~~~lA~~lgv~~~~V~~~ViGeHg~~s~vp~~S~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~k 235 (323)
T PLN00106 166 LDVVRANTFVAEKKGLDPADVDVPVVGGHAGITILPLLSQATPKVSFTDEEIEALTKRIQNGGTEVVEAK 235 (323)
T ss_pred chHHHHHHHHHHHhCCChhheEEEEEEeCCCccEeeehhcceecccCCHHHHHHHHHHHHHHHHHHHhCc
Confidence 9999999999999999999999999999987789999999998766767779999999999999999985
No 4
>KOG1495 consensus Lactate dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=7.1e-49 Score=342.20 Aligned_cols=217 Identities=24% Similarity=0.367 Sum_probs=198.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC--hhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~--~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
..||.|+|+ |.||.+++..++.+++++|++|+|.++. +|+.+||+|...+.....+....|| .+.+++|+||+|||
T Consensus 20 ~~KItVVG~-G~VGmAca~siL~k~Ladel~lvDv~~dklkGE~MDLqH~s~f~~~~~V~~~~Dy-~~sa~S~lvIiTAG 97 (332)
T KOG1495|consen 20 HNKITVVGV-GQVGMACAISILLKGLADELVLVDVNEDKLKGEMMDLQHGSAFLSTPNVVASKDY-SVSANSKLVIITAG 97 (332)
T ss_pred CceEEEEcc-chHHHHHHHHHHHhhhhhceEEEecCcchhhhhhhhhccccccccCCceEecCcc-cccCCCcEEEEecC
Confidence 459999998 9999999999999999999999999874 7899999999766544444556688 67899999999999
Q ss_pred CCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeeee-chhhHHHHHHH
Q 024248 124 VPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRANTF 202 (270)
Q Consensus 124 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG~-t~ldt~r~~~~ 202 (270)
..+++|++|++++++|+.+++.+++.+.+|.|+++++++|||+| ++||+.|+.+|||++||||. |+|||+|||++
T Consensus 98 arq~~gesRL~lvQrNV~ifK~iip~lv~ySpd~~llvvSNPVD----ilTYv~wKLSgfP~nRViGsGcnLDsaRFryL 173 (332)
T KOG1495|consen 98 ARQSEGESRLDLVQRNVDIFKAIIPALVKYSPDCILLVVSNPVD----ILTYVTWKLSGFPKNRVIGSGCNLDSARFRYL 173 (332)
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecCchH----HHHHHHHHHcCCcccceeccCcCccHHHHHHH
Confidence 99999999999999999999999999999999999999999999 78999999999999999999 99999999999
Q ss_pred HHHHhCCCCCccceEEEccCCCCceeecccccc----CCC--------CCChhHHHHHHHHHHhhHHHHHhhcCCCCCC
Q 024248 203 VAEVLGLDPREVDVPVVGGHAGVTILPLLSQVK----PSC--------SLTPTEIDYLTDRIQNGGTEVVEVIRGNWSD 269 (270)
Q Consensus 203 lA~~l~v~~~~v~~~V~G~hg~~~~vp~~S~~~----p~~--------~~~~~~~~~i~~~v~~~~~~i~~~k~~~~s~ 269 (270)
++++||++|++++++|+||||+ +.||+||.++ ++. +.+++.|+++.++|.+.+++|++.|||++|+
T Consensus 174 i~~~Lg~~pss~hgwIiGEHGd-SsV~vWSgvniAGv~l~~l~~~~~t~~d~e~w~eihK~v~~sayeviklKGyTswa 251 (332)
T KOG1495|consen 174 IGNRLGVHPSSCHGWIIGEHGD-SSVPVWSGVNIAGVSLKDLNPDLGTDYDPENWKEIHKQVVDSAYEVIKLKGYTSWA 251 (332)
T ss_pred HHHHhCCCcccceEEEeeccCC-ccceecccccccceEHhHhChhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCchHHH
Confidence 9999999999999999999999 5789999985 221 2467789999999999999999999999886
No 5
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=100.00 E-value=1.3e-48 Score=353.59 Aligned_cols=212 Identities=42% Similarity=0.662 Sum_probs=190.1
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCC--ChhHHHHhhccccCcceee-eeccCCHHHHhCCCCEEEEcCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRG-FLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~--~~~~~~dl~~~~~~~~~~~-i~~t~d~~~al~~ADvVIi~ag 123 (270)
+||+|||+ |+||++++++|+.+++.+|++|+|+++ .+|.++||.|+........ +..+.++ ++++|||+||++||
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~~~y-~~~~~aDiVvitAG 78 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGDGDY-EDLKGADIVVITAG 78 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecCCCh-hhhcCCCEEEEeCC
Confidence 59999998 999999999998888888999999995 4789999999865432221 3333456 78999999999999
Q ss_pred CCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeeee-chhhHHHHHHH
Q 024248 124 VPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRANTF 202 (270)
Q Consensus 124 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG~-t~ldt~r~~~~ 202 (270)
.||+||++|+|++..|+++++++++++.+++||++++++|||+| ++++++++.+|+|++|+||. |.||++||+++
T Consensus 79 ~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvtNPvD----~~ty~~~k~sg~p~~rvig~gt~LDsaR~~~~ 154 (313)
T COG0039 79 VPRKPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVTNPVD----ILTYIAMKFSGFPKNRVIGSGTVLDSARFRTF 154 (313)
T ss_pred CCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEecCcHH----HHHHHHHHhcCCCccceecccchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999 68888899999999999999 89999999999
Q ss_pred HHHHhCCCCCccceEEEccCCCCceeecccccc----CCCCCC----hhHHHHHHHHHHhhHHHHHhhcCC
Q 024248 203 VAEVLGLDPREVDVPVVGGHAGVTILPLLSQVK----PSCSLT----PTEIDYLTDRIQNGGTEVVEVIRG 265 (270)
Q Consensus 203 lA~~l~v~~~~v~~~V~G~hg~~~~vp~~S~~~----p~~~~~----~~~~~~i~~~v~~~~~~i~~~k~~ 265 (270)
+|+++++++++|+++|+||||+ ++||+||+++ |+.++. ++++++|.++||++|++|++.||+
T Consensus 155 lae~~~v~~~~V~~~ViGeHGd-t~vp~~S~a~v~G~pl~~~~~~~~~~~~~~i~~~v~~~g~eII~~kG~ 224 (313)
T COG0039 155 LAEKLGVSPKDVHAYVIGEHGD-TMVPLWSQATVGGKPLEELLKEDTEEDLEELIERVRNAGAEIIEAKGA 224 (313)
T ss_pred HHHHhCCChhHceeeEeccCCC-ceEEeeeeeeECCEEHHHHhhcccHhHHHHHHHHHHhhHHHHHHccCc
Confidence 9999999999999999999998 7999999997 665532 356789999999999999999955
No 6
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=2.5e-47 Score=348.01 Aligned_cols=212 Identities=30% Similarity=0.433 Sum_probs=189.1
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC--hhHHHHhhccccCc---ceeeeeccCCHHHHhCCCCEEEEcC
Q 024248 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTNA---VVRGFLGQQQLEDALTGMDIVIIPA 122 (270)
Q Consensus 48 KI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~--~~~~~dl~~~~~~~---~~~~i~~t~d~~~al~~ADvVIi~a 122 (270)
||+|||+ |.||+++|+.|+.+++++|++|+|+++. +++++||.|...+. .+. +. ++|+ ++++|||+||++|
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~-i~-~~~y-~~~~~aDivvita 76 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTK-IR-AGDY-DDCADADIIVITA 76 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEE-EE-ECCH-HHhCCCCEEEECC
Confidence 7999998 9999999999999999999999999874 78999999976543 222 33 4577 7899999999999
Q ss_pred CCCCCCCCc--hhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeeee-chhhHHHH
Q 024248 123 GVPRKPGMT--RDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRA 199 (270)
Q Consensus 123 g~~~~~g~~--r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG~-t~ldt~r~ 199 (270)
|.++++|++ |+|++..|+++++++++.+.+++|+++++++|||+| ++++++++.+|||++|+||+ |.|||+||
T Consensus 77 G~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvsNPvD----v~t~~~~k~sg~p~~rviG~gt~LDs~R~ 152 (307)
T cd05290 77 GPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILITNPLD----IAVYIAATEFDYPANKVIGTGTMLDTARL 152 (307)
T ss_pred CCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCcHH----HHHHHHHHHhCcChhheecccchHHHHHH
Confidence 999999998 699999999999999999999999999999999999 68888899999999999999 99999999
Q ss_pred HHHHHHHhCCCCCccceEEEccCCCCceeecccccc----CCCCC------ChhHHHHHHHHHHhhHHHHHhhcCCCCC
Q 024248 200 NTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVK----PSCSL------TPTEIDYLTDRIQNGGTEVVEVIRGNWS 268 (270)
Q Consensus 200 ~~~lA~~l~v~~~~v~~~V~G~hg~~~~vp~~S~~~----p~~~~------~~~~~~~i~~~v~~~~~~i~~~k~~~~s 268 (270)
++++|+++|++|++|+++||||||+ ++||+||+++ |+.++ ++.++++|.++|+++|++|+++||.+.+
T Consensus 153 ~~~la~~l~v~~~~V~~~ViGeHGd-s~vp~wS~~~v~g~~l~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~KG~t~~ 230 (307)
T cd05290 153 RRIVADKYGVDPKNVTGYVLGEHGS-HAFPVWSLVNIAGLPLDELEALFGKEPIDKDELLEEVVQAAYDVFNRKGWTNA 230 (307)
T ss_pred HHHHHHHhCCCcccEEEEEEecCCC-ceEEeeeeeEECCEEHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHccCeehH
Confidence 9999999999999999999999998 7999999986 43322 2235789999999999999999977643
No 7
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=100.00 E-value=2.1e-46 Score=343.82 Aligned_cols=216 Identities=28% Similarity=0.379 Sum_probs=189.9
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCcc-----EEEEEeCCC----ChhHHHHhhcccc-Cc-ceeeeeccCCHHHHhC
Q 024248 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMDT-NA-VVRGFLGQQQLEDALT 113 (270)
Q Consensus 45 ~~mKI~IIGa~G~VGs~la~~l~~~g~~~-----eV~LvD~~~----~~~~~~dl~~~~~-~~-~~~~i~~t~d~~~al~ 113 (270)
+|.||+|||++|+||+++++.|+.+++++ |++|+|+++ .+|+++||.|... .. ... +. ++++ ++++
T Consensus 2 ~p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~-i~-~~~~-~~~~ 78 (323)
T TIGR01759 2 KPVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVV-AT-TDPE-EAFK 78 (323)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcE-Ee-cChH-HHhC
Confidence 46799999988999999999999999999 999999964 4789999999862 11 121 22 3455 8899
Q ss_pred CCCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCC-CCEEEEecCCCCCcHHHHHHHHHHhC-CCCCCCeeee
Q 024248 114 GMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCP-KAIVNLISNPVNSTVPIAAEVFKKVG-TYDPKRLLGV 191 (270)
Q Consensus 114 ~ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~sNPv~~~~~i~t~~~~~~s-g~p~~kviG~ 191 (270)
|||+||++||.++++|++|++++..|+++++++++.|++++| +++++++|||+| ++|+++++.+ |||++||||+
T Consensus 79 daDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvD----v~t~v~~k~s~g~p~~rViG~ 154 (323)
T TIGR01759 79 DVDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVGNPAN----TNALIASKNAPDIPPKNFSAM 154 (323)
T ss_pred CCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHH----HHHHHHHHHcCCCCHHHEEEe
Confidence 999999999999999999999999999999999999999998 999999999999 6788889999 9999999999
Q ss_pred chhhHHHHHHHHHHHhCCCCCccc-eEEEccCCCCceeecccccc----CCCCC-ChhH--HHHHHHHHHhhHHHHHhhc
Q 024248 192 TMLDVVRANTFVAEVLGLDPREVD-VPVVGGHAGVTILPLLSQVK----PSCSL-TPTE--IDYLTDRIQNGGTEVVEVI 263 (270)
Q Consensus 192 t~ldt~r~~~~lA~~l~v~~~~v~-~~V~G~hg~~~~vp~~S~~~----p~~~~-~~~~--~~~i~~~v~~~~~~i~~~k 263 (270)
|.||++||++++|+++|++|++|+ .+||||||+ +++|+||+++ |+.++ +++. +++|.++++++|++|+++|
T Consensus 155 t~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~-s~v~~~S~~~v~g~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~~k 233 (323)
T TIGR01759 155 TRLDHNRAKYQLAAKAGVPVSDVKNVIIWGNHSN-TQVPDFTHATVDGRPVKEVIKDDKWLEGEFIPTVQQRGAAVIEAR 233 (323)
T ss_pred eHHHHHHHHHHHHHHhCcChHHeEEeEEEecCCC-ceeeccccCEECCccHHHHhcchhhHHHHHHHHHHhhHHHHHhcc
Confidence 999999999999999999999995 579999998 7999999996 55443 3333 5789999999999999999
Q ss_pred CCCCC
Q 024248 264 RGNWS 268 (270)
Q Consensus 264 ~~~~s 268 (270)
|++.+
T Consensus 234 G~t~~ 238 (323)
T TIGR01759 234 GASSA 238 (323)
T ss_pred CCcch
Confidence 77654
No 8
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=3.3e-46 Score=341.46 Aligned_cols=215 Identities=27% Similarity=0.377 Sum_probs=192.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC--hhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~--~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
.+||+|||+ |.||+++++.|+.+++++|++|||+++. .++++||.|+..+.....+..++|++ +++|||+||+++|
T Consensus 3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~dy~-~~~~adivvitaG 80 (312)
T cd05293 3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDYS-VTANSKVVIVTAG 80 (312)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCCHH-HhCCCCEEEECCC
Confidence 469999997 9999999999999999999999999874 78899999986443322445567885 6999999999999
Q ss_pred CCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeeee-chhhHHHHHHH
Q 024248 124 VPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRANTF 202 (270)
Q Consensus 124 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG~-t~ldt~r~~~~ 202 (270)
.++++|++|++++..|+++++++++.+++++|+++++++|||+| ++++++++.+|+|++|+||+ |.||+.|++++
T Consensus 81 ~~~k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsNP~d----~~t~~~~k~sg~p~~~viG~gt~Ld~~R~~~~ 156 (312)
T cd05293 81 ARQNEGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVSNPVD----IMTYVAWKLSGLPKHRVIGSGCNLDSARFRYL 156 (312)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEccChHH----HHHHHHHHHhCCCHHHEEecCchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999 68888999999999999999 99999999999
Q ss_pred HHHHhCCCCCccceEEEccCCCCceeecccccc----CCCCC--------ChhHHHHHHHHHHhhHHHHHhhcCCCC
Q 024248 203 VAEVLGLDPREVDVPVVGGHAGVTILPLLSQVK----PSCSL--------TPTEIDYLTDRIQNGGTEVVEVIRGNW 267 (270)
Q Consensus 203 lA~~l~v~~~~v~~~V~G~hg~~~~vp~~S~~~----p~~~~--------~~~~~~~i~~~v~~~~~~i~~~k~~~~ 267 (270)
+|+++++++++|+++||||||+ ++||+||+++ |+.++ +++++++|.++|+++|++|+++||.+.
T Consensus 157 la~~l~v~~~~v~~~v~GeHG~-s~vp~~S~~~i~g~~l~~~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~kg~t~ 232 (312)
T cd05293 157 IAERLGVAPSSVHGWIIGEHGD-SSVPVWSGVNVAGVRLQDLNPDIGTDKDPEKWKEVHKQVVDSAYEVIKLKGYTS 232 (312)
T ss_pred HHHHhCCChhhEEEEEeecCCC-CccccceeceECCEEHHHHhhhccccccHHHHHHHHHHHHHHHHHHHHhcCCch
Confidence 9999999999999999999998 6999999996 44332 234588999999999999999997653
No 9
>PLN02602 lactate dehydrogenase
Probab=100.00 E-value=3.5e-45 Score=338.70 Aligned_cols=214 Identities=26% Similarity=0.411 Sum_probs=190.3
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC--hhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGV 124 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~--~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag~ 124 (270)
+||+|||+ |.||+++++.|+.+++++|++|+|+++. .++++||.|...+.....+..++|+ ++++|||+||++||.
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~~~dy-~~~~daDiVVitAG~ 115 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILASTDY-AVTAGSDLCIVTAGA 115 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEeCCCH-HHhCCCCEEEECCCC
Confidence 69999997 9999999999999999999999999874 7889999998643221234445677 569999999999999
Q ss_pred CCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeeee-chhhHHHHHHHH
Q 024248 125 PRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRANTFV 203 (270)
Q Consensus 125 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG~-t~ldt~r~~~~l 203 (270)
++++|++|.|++..|+++++++++.|++++|+++++++|||+| ++++++++.+|||++|+||+ |.||++|+++++
T Consensus 116 ~~k~g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvtNPvd----v~t~~~~k~sg~p~~rviG~gt~LDs~R~r~~l 191 (350)
T PLN02602 116 RQIPGESRLNLLQRNVALFRKIIPELAKYSPDTILLIVSNPVD----VLTYVAWKLSGFPANRVIGSGTNLDSSRFRFLI 191 (350)
T ss_pred CCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCchH----HHHHHHHHHhCCCHHHEEeecchHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999 67888899999999999999 699999999999
Q ss_pred HHHhCCCCCccceEEEccCCCCceeecccccc----CCCC--------CChhHHHHHHHHHHhhHHHHHhhcCCCC
Q 024248 204 AEVLGLDPREVDVPVVGGHAGVTILPLLSQVK----PSCS--------LTPTEIDYLTDRIQNGGTEVVEVIRGNW 267 (270)
Q Consensus 204 A~~l~v~~~~v~~~V~G~hg~~~~vp~~S~~~----p~~~--------~~~~~~~~i~~~v~~~~~~i~~~k~~~~ 267 (270)
|+++|+++++|+++||||||+ ++||+||+++ |+.+ +++++++++.++++++|++|+++||.+.
T Consensus 192 A~~l~v~~~~V~~~ViGeHGd-s~vp~wS~~~i~G~pl~~~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~KG~t~ 266 (350)
T PLN02602 192 ADHLDVNAQDVQAYIVGEHGD-SSVALWSSVSVGGVPVLSFLEKQQIAYEKETLEEIHRAVVDSAYEVIKLKGYTS 266 (350)
T ss_pred HHHhCCCccceeeeEEecCCC-ceEeeeeeeeECCEEHHHHhhccCCccCHHHHHHHHHHHHHHHHHHHhcCCccH
Confidence 999999999999999999997 7999999985 4422 3345578999999999999999997653
No 10
>PRK05442 malate dehydrogenase; Provisional
Probab=100.00 E-value=1.4e-45 Score=338.69 Aligned_cols=216 Identities=23% Similarity=0.346 Sum_probs=188.8
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCcc-----EEEEEeCCC----ChhHHHHhhccc-cCc-ceeeeeccCCHHHHhC
Q 024248 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMD-TNA-VVRGFLGQQQLEDALT 113 (270)
Q Consensus 45 ~~mKI~IIGa~G~VGs~la~~l~~~g~~~-----eV~LvD~~~----~~~~~~dl~~~~-~~~-~~~~i~~t~d~~~al~ 113 (270)
+++||+|||++|.||+++++.|...++++ |++|+|+++ ..|+++||.|.. ... .+ .+. ++++ ++++
T Consensus 3 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~-~i~-~~~y-~~~~ 79 (326)
T PRK05442 3 APVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGV-VIT-DDPN-VAFK 79 (326)
T ss_pred CCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCc-EEe-cChH-HHhC
Confidence 45799999988999999999999999999 999999964 378899999985 221 22 232 4455 8899
Q ss_pred CCCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhC-CCCEEEEecCCCCCcHHHHHHHHHHhC-CCCCCCeeee
Q 024248 114 GMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVG-TYDPKRLLGV 191 (270)
Q Consensus 114 ~ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~sNPv~~~~~i~t~~~~~~s-g~p~~kviG~ 191 (270)
|||+||+++|.++++|++|.+++..|+++++++++.|++++ |+++++++|||+| ++++++++.+ |||++||||+
T Consensus 80 daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvD----v~t~v~~k~s~g~p~~rViG~ 155 (326)
T PRK05442 80 DADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGNPAN----TNALIAMKNAPDLPAENFTAM 155 (326)
T ss_pred CCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCchH----HHHHHHHHHcCCCCHHHEEee
Confidence 99999999999999999999999999999999999999988 7999999999999 6778888998 9999999999
Q ss_pred chhhHHHHHHHHHHHhCCCCCccceE-EEccCCCCceeecccccc----CCCCC-ChhH--HHHHHHHHHhhHHHHHhhc
Q 024248 192 TMLDVVRANTFVAEVLGLDPREVDVP-VVGGHAGVTILPLLSQVK----PSCSL-TPTE--IDYLTDRIQNGGTEVVEVI 263 (270)
Q Consensus 192 t~ldt~r~~~~lA~~l~v~~~~v~~~-V~G~hg~~~~vp~~S~~~----p~~~~-~~~~--~~~i~~~v~~~~~~i~~~k 263 (270)
|.||++||++++|++++++|++|+++ ||||||+ ++||+||+++ |+.++ ++++ +++|.++++++|++|+++|
T Consensus 156 t~LDs~R~r~~la~~l~v~~~~V~~~vV~GeHG~-s~~~~~S~~~v~g~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~~k 234 (326)
T PRK05442 156 TRLDHNRALSQLAAKAGVPVADIKKMTVWGNHSA-TQYPDFRHATIDGKPAAEVINDQAWLEDTFIPTVQKRGAAIIEAR 234 (326)
T ss_pred eHHHHHHHHHHHHHHhCcChHHeEEeEEEECCcC-ceeeccccCEECCEEHHHHccchhhHHHHHHHHHHhhHHHHHhCc
Confidence 99999999999999999999999985 5999998 7999999997 55553 3333 5689999999999999999
Q ss_pred CCCCC
Q 024248 264 RGNWS 268 (270)
Q Consensus 264 ~~~~s 268 (270)
|++.+
T Consensus 235 G~t~~ 239 (326)
T PRK05442 235 GASSA 239 (326)
T ss_pred CCccH
Confidence 77653
No 11
>TIGR01771 L-LDH-NAD L-lactate dehydrogenase. This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.
Probab=100.00 E-value=1.1e-44 Score=329.77 Aligned_cols=209 Identities=25% Similarity=0.448 Sum_probs=185.4
Q ss_pred EEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC--hhHHHHhhccccCccee-eeeccCCHHHHhCCCCEEEEcCCCCCC
Q 024248 51 VLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTNAVVR-GFLGQQQLEDALTGMDIVIIPAGVPRK 127 (270)
Q Consensus 51 IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~--~~~~~dl~~~~~~~~~~-~i~~t~d~~~al~~ADvVIi~ag~~~~ 127 (270)
|||+ |.||+++++.|+.+++++|++|+|+++. +++++||.|........ .+. .+++ ++++|||+||+++|.+++
T Consensus 1 iIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~-~~~~-~~~~daDivVitag~~rk 77 (299)
T TIGR01771 1 IIGA-GNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIR-SGDY-SDCKDADLVVITAGAPQK 77 (299)
T ss_pred CCCc-CHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEe-cCCH-HHHCCCCEEEECCCCCCC
Confidence 6897 9999999999999999999999999874 78999999986432211 233 4566 789999999999999999
Q ss_pred CCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeeee-chhhHHHHHHHHHHH
Q 024248 128 PGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRANTFVAEV 206 (270)
Q Consensus 128 ~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG~-t~ldt~r~~~~lA~~ 206 (270)
+|++|.|++..|+++++++++.+++++|++++|++|||+| ++++++++.+++|++|++|+ |.||+.|+++++|++
T Consensus 78 ~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsNP~d----~~t~~~~~~sg~p~~~viG~gt~LDs~R~~~~la~~ 153 (299)
T TIGR01771 78 PGETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVATNPVD----ILTYVAWKLSGFPKNRVIGSGTVLDTARLRYLLAEK 153 (299)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCHHH----HHHHHHHHHhCCCHHHEEeccchHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999 68888899999999999999 899999999999999
Q ss_pred hCCCCCccceEEEccCCCCceeecccccc----CCCCC-------ChhHHHHHHHHHHhhHHHHHhhcCCCC
Q 024248 207 LGLDPREVDVPVVGGHAGVTILPLLSQVK----PSCSL-------TPTEIDYLTDRIQNGGTEVVEVIRGNW 267 (270)
Q Consensus 207 l~v~~~~v~~~V~G~hg~~~~vp~~S~~~----p~~~~-------~~~~~~~i~~~v~~~~~~i~~~k~~~~ 267 (270)
+|+++++|+++||||||+ ++||+||+++ |+.++ ++.++++|.++|+++|++|+++||.+.
T Consensus 154 l~v~~~~V~~~v~GeHG~-s~vp~~S~~~v~g~pl~~~~~~~~~~~~~~~~~i~~~v~~~g~~ii~~kG~t~ 224 (299)
T TIGR01771 154 LGVDPQSVHAYIIGEHGD-SEVPVWSSATIGGVPLLDYLKAKGTETDLDLEEIEKEVRDAAYEIINRKGATY 224 (299)
T ss_pred hCcCcCeEEEEEEecCCC-ceeeceeeeEECCEEHHHHhhhcccccHHHHHHHHHHHHHHHHHHhhcCCeee
Confidence 999999999999999988 7999999996 54333 123467899999999999999997654
No 12
>PTZ00325 malate dehydrogenase; Provisional
Probab=100.00 E-value=8.2e-44 Score=326.12 Aligned_cols=216 Identities=63% Similarity=1.002 Sum_probs=187.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCCCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPR 126 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag~~~ 126 (270)
+||+|||++|.||+++++.|+.+++++|++|+|++...++++||.|......+..+....++.++++|||+||+++|.++
T Consensus 9 ~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVitaG~~~ 88 (321)
T PTZ00325 9 FKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGELWEKALRGADLVLICAGVPR 88 (321)
T ss_pred CEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCcCceEEEecCCCchHHHhCCCCEEEECCCCCC
Confidence 39999998899999999999999999999999996668889999997543233222111343589999999999999999
Q ss_pred CCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeeeechhhHHHHHHHHHHH
Q 024248 127 KPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGVTMLDVVRANTFVAEV 206 (270)
Q Consensus 127 ~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG~t~ldt~r~~~~lA~~ 206 (270)
+++++|.+++..|+++++++++.+++++|+++++++|||+|.++++....+++.+++|++++||++.|||+||++++|++
T Consensus 89 ~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~~~viG~g~LDs~R~r~~la~~ 168 (321)
T PTZ00325 89 KPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKAGVYDPRKLFGVTTLDVVRARKFVAEA 168 (321)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhccCCChhheeechhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999655544433468999999999999889999999999999
Q ss_pred hCCCCCccceEEEccCCCCceeecccccc-CCCCCChhHHHHHHHHHHhhHHHHHhhcCC
Q 024248 207 LGLDPREVDVPVVGGHAGVTILPLLSQVK-PSCSLTPTEIDYLTDRIQNGGTEVVEVIRG 265 (270)
Q Consensus 207 l~v~~~~v~~~V~G~hg~~~~vp~~S~~~-p~~~~~~~~~~~i~~~v~~~~~~i~~~k~~ 265 (270)
+|++|++|+++||||||++++||+||++. | ++++++++|.++|+++|++|+++|+|
T Consensus 169 l~v~~~~V~~~VlGeHGd~s~v~~~S~~g~~---l~~~~~~~i~~~v~~~g~~Ii~~k~~ 225 (321)
T PTZ00325 169 LGMNPYDVNVPVVGGHSGVTIVPLLSQTGLS---LPEEQVEQITHRVQVGGDEVVKAKEG 225 (321)
T ss_pred hCcChhheEEEEEeecCCcccccchhccCCC---CCHHHHHHHHHHHHHHHHHHHhcccC
Confidence 99999999999999999856899999994 4 45567999999999999999998853
No 13
>PRK05086 malate dehydrogenase; Provisional
Probab=100.00 E-value=7.4e-44 Score=326.18 Aligned_cols=215 Identities=61% Similarity=0.954 Sum_probs=188.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHh-CCCccEEEEEeCCCC-hhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKI-NPLVSVLHLYDVVNT-PGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGV 124 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~-~g~~~eV~LvD~~~~-~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag~ 124 (270)
|||+||||+|.||+++++.+.. .+...+++|+|+++. .++++|+.|......+.. ...+|+.++++++|+||+|+|.
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~-~~~~d~~~~l~~~DiVIitaG~ 79 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKG-FSGEDPTPALEGADVVLISAGV 79 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEE-eCCCCHHHHcCCCCEEEEcCCC
Confidence 7999999999999999998865 567779999999753 456789987521122221 1145766889999999999999
Q ss_pred CCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeeeechhhHHHHHHHHH
Q 024248 125 PRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGVTMLDVVRANTFVA 204 (270)
Q Consensus 125 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG~t~ldt~r~~~~lA 204 (270)
+++++++|.+++..|+++++++++.|++++|+++++++|||+|.+|+++.+.+++.+|+|++|+||+|.|||+|+++++|
T Consensus 80 ~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvsNP~D~~t~~~~~~~~~~sg~p~~rvig~~~Lds~R~~~~ia 159 (312)
T PRK05086 80 ARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDVIRSETFVA 159 (312)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCchHHHHHHHHHHHHHhcCCCHHHEEeeecHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999888888888899999999999998899999999999
Q ss_pred HHhCCCCCccceEEEccCCCCceeeccccccCCCCCChhHHHHHHHHHHhhHHHHHhhc
Q 024248 205 EVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEVI 263 (270)
Q Consensus 205 ~~l~v~~~~v~~~V~G~hg~~~~vp~~S~~~p~~~~~~~~~~~i~~~v~~~~~~i~~~k 263 (270)
+.+|++|++|+++||||||++++||+||++ +-..++++++++|.++|+++|++|+++|
T Consensus 160 ~~l~~~~~~v~~~v~GeHg~~s~~p~~S~~-~g~~l~~~~~~~i~~~v~~~g~~ii~~k 217 (312)
T PRK05086 160 ELKGKQPGEVEVPVIGGHSGVTILPLLSQV-PGVSFTEQEVADLTKRIQNAGTEVVEAK 217 (312)
T ss_pred HHhCCChhheEEEEEEecCCCceecccccc-CCccCCHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999887899999999 3333666679999999999999999998
No 14
>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=2.9e-44 Score=314.69 Aligned_cols=225 Identities=72% Similarity=1.128 Sum_probs=214.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCCC
Q 024248 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGV 124 (270)
Q Consensus 45 ~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag~ 124 (270)
+..||+|.||+|-||+.+.++|..+++++++.|||+....|.+.||.|.++...+..+.+.+.+++++++||+|||.||+
T Consensus 27 ~~~KVAvlGAaGGIGQPLSLLlK~np~Vs~LaLYDi~~~~GVaaDlSHI~T~s~V~g~~g~~~L~~al~~advVvIPAGV 106 (345)
T KOG1494|consen 27 RGLKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIANTPGVAADLSHINTNSSVVGFTGADGLENALKGADVVVIPAGV 106 (345)
T ss_pred CcceEEEEecCCccCccHHHHHhcCcccceeeeeecccCCcccccccccCCCCceeccCChhHHHHHhcCCCEEEecCCC
Confidence 34599999999999999999999999999999999998899999999998877777777777899999999999999999
Q ss_pred CCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeeeechhhHHHHHHHHH
Q 024248 125 PRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGVTMLDVVRANTFVA 204 (270)
Q Consensus 125 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG~t~ldt~r~~~~lA 204 (270)
||+||++|.|++..|..++++++..+.++||++.+.++|||+++++|++++++++..-|++.|++|+|.||.-|.+.+++
T Consensus 107 PRKPGMTRDDLFn~NAgIv~~l~~aia~~cP~A~i~vIsNPVNstVPIaaevlKk~G~ydpkklfGVTtLDvVRA~tFv~ 186 (345)
T KOG1494|consen 107 PRKPGMTRDDLFNINAGIVKTLAAAIAKCCPNALILVISNPVNSTVPIAAEVLKKAGVYDPKKLFGVTTLDVVRANTFVA 186 (345)
T ss_pred CCCCCCcHHHhhhcchHHHHHHHHHHHhhCccceeEeecCcccccchHHHHHHHHcCCCCccceeceehhhhhhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCC-CccceEEEccCCCCceeeccccccCCCCCChhHHHHHHHHHHhhHHHHHhhcCCCCCC
Q 024248 205 EVLGLDP-REVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEVIRGNWSD 269 (270)
Q Consensus 205 ~~l~v~~-~~v~~~V~G~hg~~~~vp~~S~~~p~~~~~~~~~~~i~~~v~~~~~~i~~~k~~~~s~ 269 (270)
+.++++| .+++++|+|+|.+.|++|++|+.+|...+++++++.++.+++++|.||++.|-|-+|+
T Consensus 187 ~~~~~~p~~~v~VPVIGGHaG~TIlPLlSQ~~p~~~~~~~~~~~Lt~RiQ~gGtEVV~AKaGaGSA 252 (345)
T KOG1494|consen 187 EVLNLDPAEDVDVPVIGGHAGITIIPLLSQCKPPFRFTDDEIEALTHRIQNGGTEVVKAKAGAGSA 252 (345)
T ss_pred HHhCCCchhcCCcceecCcCCceEeeecccCCCcccCCHHHHHHHHHHHHhCCceEEEeccCCCch
Confidence 9999999 5599999999999999999999999888999999999999999999999999999986
No 15
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=100.00 E-value=8.2e-44 Score=326.26 Aligned_cols=214 Identities=26% Similarity=0.422 Sum_probs=190.2
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC--hhHHHHhhccccCc-ceeeeeccCCHHHHhCCCCEEEEc
Q 024248 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTNA-VVRGFLGQQQLEDALTGMDIVIIP 121 (270)
Q Consensus 45 ~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~--~~~~~dl~~~~~~~-~~~~i~~t~d~~~al~~ADvVIi~ 121 (270)
.++||+|||+ |.||+++++.|+..++++|++|+|+++. +++++||.|...+. ... +. ++++ ++++|||+||++
T Consensus 5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~-i~-~~~~-~~~~~adivIit 80 (315)
T PRK00066 5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTK-IY-AGDY-SDCKDADLVVIT 80 (315)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeE-EE-eCCH-HHhCCCCEEEEe
Confidence 3469999998 9999999999999999999999999874 68899999986432 222 33 4566 679999999999
Q ss_pred CCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeeee-chhhHHHHH
Q 024248 122 AGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRAN 200 (270)
Q Consensus 122 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG~-t~ldt~r~~ 200 (270)
+|.++++|++|.+++..|+++++++++.+++++|+++++++|||+| ++++++++.+|+|++|+||+ |.||+.|++
T Consensus 81 ag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvsNP~d----~~~~~~~k~sg~p~~~viG~gt~LDs~R~~ 156 (315)
T PRK00066 81 AGAPQKPGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVASNPVD----ILTYATWKLSGFPKERVIGSGTSLDSARFR 156 (315)
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCcHH----HHHHHHHHHhCCCHHHEeecCchHHHHHHH
Confidence 9999999999999999999999999999999999999999999999 67788888899999999999 799999999
Q ss_pred HHHHHHhCCCCCccceEEEccCCCCceeecccccc----CCCC-------CChhHHHHHHHHHHhhHHHHHhhcCCCC
Q 024248 201 TFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVK----PSCS-------LTPTEIDYLTDRIQNGGTEVVEVIRGNW 267 (270)
Q Consensus 201 ~~lA~~l~v~~~~v~~~V~G~hg~~~~vp~~S~~~----p~~~-------~~~~~~~~i~~~v~~~~~~i~~~k~~~~ 267 (270)
+++|+++|+++++|+++||||||+ +++|+||+++ |+.+ +++++++++.++++++|++|+++||.+.
T Consensus 157 ~~la~~l~v~~~~V~~~viGeHG~-s~v~~~S~~~v~g~~l~~~~~~~~~~~~~~~~~i~~~v~~~g~~ii~~kg~t~ 233 (315)
T PRK00066 157 YMLSEKLDVDPRSVHAYIIGEHGD-TEFPVWSHANVAGVPLEEYLEENEQYDEEDLDEIFENVRDAAYEIIEKKGATY 233 (315)
T ss_pred HHHHHHhCCCcccEEEEEEecCCC-cceecceeceECCEEHHHHhhhccCcCHHHHHHHHHHHHHHHHHHHhcCCeeh
Confidence 999999999999999999999988 6999999996 3322 4456688999999999999999997654
No 16
>PLN00112 malate dehydrogenase (NADP); Provisional
Probab=100.00 E-value=4.3e-44 Score=338.55 Aligned_cols=217 Identities=24% Similarity=0.309 Sum_probs=189.3
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhC-------CCccEEEEEeCCCC--hhHHHHhhccccCcceeeee-ccCCHHHHhC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKIN-------PLVSVLHLYDVVNT--PGVTADISHMDTNAVVRGFL-GQQQLEDALT 113 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~-------g~~~eV~LvD~~~~--~~~~~dl~~~~~~~~~~~i~-~t~d~~~al~ 113 (270)
.++.||+|||++|+||+++++.|+.+ +++.||+++|+++. +|+++||.|... +.+..+. .++++ ++++
T Consensus 98 ~~~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~-~~~~~v~i~~~~y-e~~k 175 (444)
T PLN00112 98 KKLINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLY-PLLREVSIGIDPY-EVFQ 175 (444)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhh-hhcCceEEecCCH-HHhC
Confidence 34579999998899999999999998 77779999999874 788999999852 2111222 34566 7899
Q ss_pred CCCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhH-hCCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeeee-
Q 024248 114 GMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAK-CCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV- 191 (270)
Q Consensus 114 ~ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~-~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG~- 191 (270)
|||+||+++|.++++|++|+|++..|.++++++++.|.+ ++|++++|++|||+| ++++++++.+|++++|+||+
T Consensus 176 daDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsNPvD----v~t~v~~k~sg~~~~rViGtg 251 (444)
T PLN00112 176 DAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVGNPCN----TNALICLKNAPNIPAKNFHAL 251 (444)
T ss_pred cCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCCcHH----HHHHHHHHHcCCCCcceEEee
Confidence 999999999999999999999999999999999999999 589999999999999 67888899999999999999
Q ss_pred chhhHHHHHHHHHHHhCCCCCcc-ceEEEccCCCCceeecccccc----CCCCC-ChhH--HHHHHHHHHhhHHHHHhhc
Q 024248 192 TMLDVVRANTFVAEVLGLDPREV-DVPVVGGHAGVTILPLLSQVK----PSCSL-TPTE--IDYLTDRIQNGGTEVVEVI 263 (270)
Q Consensus 192 t~ldt~r~~~~lA~~l~v~~~~v-~~~V~G~hg~~~~vp~~S~~~----p~~~~-~~~~--~~~i~~~v~~~~~~i~~~k 263 (270)
|.||++||+++||+++|+++++| +++||||||+ ++||+||+++ |+.++ .+++ +++|.++|+++|++|+++|
T Consensus 252 T~LDsaR~r~~LA~~l~V~~~~V~~~~V~GeHGd-sqvp~wS~a~V~G~pl~e~i~~~~~~~~ei~~~v~~~g~~Ii~~k 330 (444)
T PLN00112 252 TRLDENRAKCQLALKAGVFYDKVSNVTIWGNHST-TQVPDFLNAKINGLPVKEVITDHKWLEEEFTPKVQKRGGVLIKKW 330 (444)
T ss_pred ccHHHHHHHHHHHHHhCcCHHHcccceEEecCCC-ceeeccceeEECCccHHHhhccccchHHHHHHHHHHHHHHHHhcc
Confidence 89999999999999999999999 6699999998 7999999996 55443 2223 6789999999999999998
Q ss_pred CCCC
Q 024248 264 RGNW 267 (270)
Q Consensus 264 ~~~~ 267 (270)
|+++
T Consensus 331 G~t~ 334 (444)
T PLN00112 331 GRSS 334 (444)
T ss_pred Cchh
Confidence 8654
No 17
>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent. This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.
Probab=100.00 E-value=6e-44 Score=333.04 Aligned_cols=217 Identities=24% Similarity=0.333 Sum_probs=186.8
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCcc-----EEEEE--eCCCC--hhHHHHhhccccCcceeeee-ccCCHHHHhC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVS-----VLHLY--DVVNT--PGVTADISHMDTNAVVRGFL-GQQQLEDALT 113 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~-----eV~Lv--D~~~~--~~~~~dl~~~~~~~~~~~i~-~t~d~~~al~ 113 (270)
.++.||+|||++|+||+++++.|+..++++ +++|+ |+++. +++++||.|... +.+..+. .++++ ++++
T Consensus 42 ~~p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~-~~~~~v~i~~~~y-~~~k 119 (387)
T TIGR01757 42 KKTVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLY-PLLREVSIGIDPY-EVFE 119 (387)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhh-hhcCceEEecCCH-HHhC
Confidence 446799999988999999999999999998 56667 65553 788999999852 2111222 24565 8899
Q ss_pred CCCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhC-CCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeeee-
Q 024248 114 GMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV- 191 (270)
Q Consensus 114 ~ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG~- 191 (270)
|||+||+++|.|+++|++|.+++..|+++++++++.|++++ |++++|++|||+| ++|+++++.+++|++|+||+
T Consensus 120 daDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsNPvD----v~t~v~~k~sg~~~~rviG~g 195 (387)
T TIGR01757 120 DADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVGNPCN----TNALIAMKNAPNIPRKNFHAL 195 (387)
T ss_pred CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCcHH----HHHHHHHHHcCCCcccEEEec
Confidence 99999999999999999999999999999999999999977 9999999999999 67888889999999999999
Q ss_pred chhhHHHHHHHHHHHhCCCCCcc-ceEEEccCCCCceeecccccc----CCCCC-ChhH--HHHHHHHHHhhHHHHHhhc
Q 024248 192 TMLDVVRANTFVAEVLGLDPREV-DVPVVGGHAGVTILPLLSQVK----PSCSL-TPTE--IDYLTDRIQNGGTEVVEVI 263 (270)
Q Consensus 192 t~ldt~r~~~~lA~~l~v~~~~v-~~~V~G~hg~~~~vp~~S~~~----p~~~~-~~~~--~~~i~~~v~~~~~~i~~~k 263 (270)
|.||++||+++||+++++++++| +++||||||+ ++||+||+++ |+.++ .+.+ +++|.++|+++|++|+++|
T Consensus 196 T~LDsaR~r~~LA~~l~v~~~~V~~~~V~GeHGd-s~vp~~S~a~V~G~pl~~~~~~~~~~~~ei~~~v~~~g~eIi~~K 274 (387)
T TIGR01757 196 TRLDENRAKCQLALKSGKFYTSVSNVTIWGNHST-TQVPDFVNAKIGGRPAKEVIKDTKWLEEEFTPTVQKRGGALIKKW 274 (387)
T ss_pred chhHHHHHHHHHHHHHCcChhHcceeEEEecCCC-cEEecceeeEECCEEhHHhcccccchHHHHHHHHHHHHHHHHhcc
Confidence 89999999999999999999999 5999999998 7999999996 66543 2223 6789999999999999998
Q ss_pred CCCC
Q 024248 264 RGNW 267 (270)
Q Consensus 264 ~~~~ 267 (270)
|.+.
T Consensus 275 G~t~ 278 (387)
T TIGR01757 275 GRSS 278 (387)
T ss_pred Cchh
Confidence 7554
No 18
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=5.5e-44 Score=328.13 Aligned_cols=214 Identities=31% Similarity=0.435 Sum_probs=185.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCcc-----EEEEEeCCC--C--hhHHHHhhcccc-C-cceeeeeccCCHHHHhCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN--T--PGVTADISHMDT-N-AVVRGFLGQQQLEDALTGM 115 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~-----eV~LvD~~~--~--~~~~~dl~~~~~-~-~~~~~i~~t~d~~~al~~A 115 (270)
.||+||||+|+||+++++.|+.+++++ +++|+|+++ . +++++||.|... . ... .+. .+..++++||
T Consensus 1 ~KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~~~-~i~--~~~~~~~~~a 77 (323)
T cd00704 1 LHVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKGV-VIT--TDPEEAFKDV 77 (323)
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccCCc-EEe--cChHHHhCCC
Confidence 389999988999999999999999988 499999986 3 678899999842 1 112 222 3445899999
Q ss_pred CEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhC-CCCEEEEecCCCCCcHHHHHHHHHHhCC-CCCCCeeeech
Q 024248 116 DIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVGT-YDPKRLLGVTM 193 (270)
Q Consensus 116 DvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~sNPv~~~~~i~t~~~~~~sg-~p~~kviG~t~ 193 (270)
|+||++||.++++|++|.+++..|+++++++++.|++++ |+++++++|||+| ++++++++.+| +|++||||+|.
T Consensus 78 DiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD----~~t~~~~k~sg~~p~~~vig~t~ 153 (323)
T cd00704 78 DVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVGNPAN----TNALIALKNAPNLPPKNFTALTR 153 (323)
T ss_pred CEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeCCcHH----HHHHHHHHHcCCCCHHHEEEeeH
Confidence 999999999999999999999999999999999999996 9999999999999 67888899999 59999999999
Q ss_pred hhHHHHHHHHHHHhCCCCCcc-ceEEEccCCCCceeecccccc----CCCCC----ChhH--HHHHHHHHHhhHHHHHhh
Q 024248 194 LDVVRANTFVAEVLGLDPREV-DVPVVGGHAGVTILPLLSQVK----PSCSL----TPTE--IDYLTDRIQNGGTEVVEV 262 (270)
Q Consensus 194 ldt~r~~~~lA~~l~v~~~~v-~~~V~G~hg~~~~vp~~S~~~----p~~~~----~~~~--~~~i~~~v~~~~~~i~~~ 262 (270)
|||+||++++|++++++|++| .++||||||+ +++|+||+++ |+.++ .+++ .++|.++++++|++|+++
T Consensus 154 LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~-s~v~~~S~~~v~g~~~~~~~~~~~~~~~~~~~i~~~v~~~~~~Ii~~ 232 (323)
T cd00704 154 LDHNRAKAQVARKLGVRVSDVKNVIIWGNHSN-TQVPDLSNAVVYGPGGTEWVLDLLDEEWLNDEFVKTVQKRGAAIIKK 232 (323)
T ss_pred HHHHHHHHHHHHHhCcCHHHceeeeEEecccC-ceeeccccceecCccHHHhcccccChHHHHHHHHHHHHhhHHHHHhc
Confidence 999999999999999999999 5699999999 7999999996 54332 1223 578999999999999999
Q ss_pred cCCCCC
Q 024248 263 IRGNWS 268 (270)
Q Consensus 263 k~~~~s 268 (270)
||++.+
T Consensus 233 kg~t~~ 238 (323)
T cd00704 233 RGASSA 238 (323)
T ss_pred cCcchh
Confidence 987654
No 19
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=1e-43 Score=326.17 Aligned_cols=216 Identities=23% Similarity=0.349 Sum_probs=188.8
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCcc-----EEEEEeCCC----ChhHHHHhhcccc-C-cceeeeeccCCHHHHhC
Q 024248 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMDT-N-AVVRGFLGQQQLEDALT 113 (270)
Q Consensus 45 ~~mKI~IIGa~G~VGs~la~~l~~~g~~~-----eV~LvD~~~----~~~~~~dl~~~~~-~-~~~~~i~~t~d~~~al~ 113 (270)
+++||+|||++|+||+++++.|+.+++++ |++|+|+++ +.|+++||.|... . ..+. +. +.++ ++++
T Consensus 1 ~p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~-i~-~~~~-~~~~ 77 (322)
T cd01338 1 KPVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIV-IT-DDPN-VAFK 77 (322)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceE-Ee-cCcH-HHhC
Confidence 46799999988999999999999999999 999999954 3688999999852 2 2222 32 4455 8899
Q ss_pred CCCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhC-CCCEEEEecCCCCCcHHHHHHHHHHhC-CCCCCCeeee
Q 024248 114 GMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVG-TYDPKRLLGV 191 (270)
Q Consensus 114 ~ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~sNPv~~~~~i~t~~~~~~s-g~p~~kviG~ 191 (270)
|||+||++||.++++|++|.+++..|+++++++++.|++++ |++++|++|||+| ++++++++.+ +||+++|||+
T Consensus 78 daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD----~~t~~~~k~sg~~p~~~ViG~ 153 (322)
T cd01338 78 DADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCN----TNALIAMKNAPDIPPDNFTAM 153 (322)
T ss_pred CCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHH----HHHHHHHHHcCCCChHheEEe
Confidence 99999999999999999999999999999999999999999 5999999999999 6777888898 4999999999
Q ss_pred chhhHHHHHHHHHHHhCCCCCccce-EEEccCCCCceeecccccc----CCCC-CChhH--HHHHHHHHHhhHHHHHhhc
Q 024248 192 TMLDVVRANTFVAEVLGLDPREVDV-PVVGGHAGVTILPLLSQVK----PSCS-LTPTE--IDYLTDRIQNGGTEVVEVI 263 (270)
Q Consensus 192 t~ldt~r~~~~lA~~l~v~~~~v~~-~V~G~hg~~~~vp~~S~~~----p~~~-~~~~~--~~~i~~~v~~~~~~i~~~k 263 (270)
|.||++||++.+|+++|++++++++ +||||||+ ++||+||++. |+.+ +.+.+ +++|.++++++|++|+++|
T Consensus 154 t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG~-s~vp~~S~~~v~g~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~~k 232 (322)
T cd01338 154 TRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHSP-TQYPDFTNATIGGKPAAEVINDRAWLEDEFIPTVQKRGAAIIKAR 232 (322)
T ss_pred hHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCcc-cEEEehhhcEECCEeHHHhcChHhhHHHHHHHHHHhhHHHHHhCc
Confidence 9999999999999999999999997 66999988 7999999986 5544 34433 5789999999999999999
Q ss_pred CCCCC
Q 024248 264 RGNWS 268 (270)
Q Consensus 264 ~~~~s 268 (270)
|++.+
T Consensus 233 G~t~~ 237 (322)
T cd01338 233 GASSA 237 (322)
T ss_pred CCccH
Confidence 77653
No 20
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=100.00 E-value=7.9e-43 Score=318.79 Aligned_cols=213 Identities=29% Similarity=0.427 Sum_probs=186.9
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC--hhHHHHhhccccCccee-eeeccCCHHHHhCCCCEEEEcCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTNAVVR-GFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~--~~~~~dl~~~~~~~~~~-~i~~t~d~~~al~~ADvVIi~ag 123 (270)
+||+|||+ |.+|+++++.|+..|++.+|+|+|+++. ++.++||.|........ .+. +.++ +++++||+||+++|
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~-~~~~-~~l~~aDIVIitag 77 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK-AGDY-SDCKDADIVVITAG 77 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE-cCCH-HHhCCCCEEEEccC
Confidence 48999997 9999999999999998889999999875 56788998874321111 122 3566 56999999999999
Q ss_pred CCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeeee-chhhHHHHHHH
Q 024248 124 VPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRANTF 202 (270)
Q Consensus 124 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG~-t~ldt~r~~~~ 202 (270)
.++++|++|.+++..|+++++++++.+++++|+++++++|||+| ++++++++.++||++||||+ |.||++|++++
T Consensus 78 ~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvsNP~d----~~~~~~~~~~g~p~~~v~g~gt~LDs~R~~~~ 153 (306)
T cd05291 78 APQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVASNPVD----VITYVVQKLSGLPKNRVIGTGTSLDTARLRRA 153 (306)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecChHH----HHHHHHHHHhCcCHHHEeeccchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999 68888899999999999999 89999999999
Q ss_pred HHHHhCCCCCccceEEEccCCCCceeecccccc----CCCC------CChhHHHHHHHHHHhhHHHHHhhcCCCC
Q 024248 203 VAEVLGLDPREVDVPVVGGHAGVTILPLLSQVK----PSCS------LTPTEIDYLTDRIQNGGTEVVEVIRGNW 267 (270)
Q Consensus 203 lA~~l~v~~~~v~~~V~G~hg~~~~vp~~S~~~----p~~~------~~~~~~~~i~~~v~~~~~~i~~~k~~~~ 267 (270)
+|+++++++++|+++||||||+ +++|+||+++ |+.+ +.+++++++.++++++|++|+++||.+.
T Consensus 154 la~~l~v~~~~v~~~V~G~Hg~-s~~~~~S~~~v~g~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~ii~~kg~t~ 227 (306)
T cd05291 154 LAEKLNVDPRSVHAYVLGEHGD-SQFVAWSTVTVGGKPLLDLLKEGKLSELDLDEIEEDVRKAGYEIINGKGATY 227 (306)
T ss_pred HHHHHCCCcccceEEEEecCCC-ceeecceeeEEcCEEHHHHhhccccChHHHHHHHHHHHHHHHHHHHccCccH
Confidence 9999999999999999999998 7999999986 4422 3355688999999999999999997664
No 21
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=100.00 E-value=7.3e-43 Score=318.19 Aligned_cols=212 Identities=31% Similarity=0.497 Sum_probs=188.2
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC--hhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCCCCC
Q 024248 49 VAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPR 126 (270)
Q Consensus 49 I~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~--~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag~~~ 126 (270)
|+|||+ |.||+++++.++..++++||+|+|+++. .++++||.|.........+..++|+ +++++||+||+++|.|+
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~~~~-~~l~~aDiVIitag~p~ 78 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRGGDY-ADAADADIVVITAGAPR 78 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEECCCH-HHhCCCCEEEEcCCCCC
Confidence 589998 9999999999999999999999999874 6788999998643221123334566 68999999999999999
Q ss_pred CCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeeee-chhhHHHHHHHHHH
Q 024248 127 KPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRANTFVAE 205 (270)
Q Consensus 127 ~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG~-t~ldt~r~~~~lA~ 205 (270)
+++++|.+++..|+++++++++.+++++|+++++++|||+| ++++++++.+|+|++|++|+ |.||+.|+++++|+
T Consensus 79 ~~~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~sNP~d----~~~~~~~~~sg~~~~kviG~gt~lDs~r~~~~la~ 154 (300)
T cd00300 79 KPGETRLDLINRNAPILRSVITNLKKYGPDAIILVVSNPVD----ILTYVAQKLSGLPKNRVIGSGTLLDSARFRSLLAE 154 (300)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccChHH----HHHHHHHHHhCcCHHHEEecCCcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999 68888899999999999999 79999999999999
Q ss_pred HhCCCCCccceEEEccCCCCceeecccccc----CCCCC---ChhHHHHHHHHHHhhHHHHHhhcCCCC
Q 024248 206 VLGLDPREVDVPVVGGHAGVTILPLLSQVK----PSCSL---TPTEIDYLTDRIQNGGTEVVEVIRGNW 267 (270)
Q Consensus 206 ~l~v~~~~v~~~V~G~hg~~~~vp~~S~~~----p~~~~---~~~~~~~i~~~v~~~~~~i~~~k~~~~ 267 (270)
++++++++|+++|+||||+ ++||+||+++ |+.++ +++++++|.+++++++++|+++||++.
T Consensus 155 ~l~v~~~~v~~~viGeHg~-s~v~~~S~~~v~g~p~~~~~~~~~~~~~~l~~~v~~~~~~ii~~kg~t~ 222 (300)
T cd00300 155 KLDVDPQSVHAYVLGEHGD-SQVVAWSTATVGGLPLEELAPFTKLDLEAIEEEVRTSGYEIIRLKGATN 222 (300)
T ss_pred HhCCCcccEEEEEEeccCC-ceeeeeeeeEECCEEHHHhhcccHHHHHHHHHHHHHHHHHHHHccCcch
Confidence 9999999999999999988 6999999996 65432 345578999999999999999997664
No 22
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent. The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.
Probab=100.00 E-value=3e-42 Score=314.72 Aligned_cols=209 Identities=32% Similarity=0.559 Sum_probs=184.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC--hhHHHHhhccccCcce-eeeeccCCHHHHhCCCCEEEEcCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTNAVV-RGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~--~~~~~dl~~~~~~~~~-~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
|||+|||+ |+||+.+|+.++..|+. +|+++|+++. .++++|+.+....... ..+..++|++ ++++||+||+++|
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la~~g~~-~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~~-~~~~aDiVIitag 78 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLAEKELA-DLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTGTNNYA-DTANSDIVVITAG 78 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCCC-eEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEecCCHH-HhCCCCEEEEcCC
Confidence 69999998 99999999999999987 7999999764 4566777765432211 2344567885 4999999999999
Q ss_pred CCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeeee-chhhHHHHHHH
Q 024248 124 VPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRANTF 202 (270)
Q Consensus 124 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG~-t~ldt~r~~~~ 202 (270)
.|+++|++|++++..|+++++++++.+.+++|++++|++|||+| ++++++++.+|+|++|+||+ |.|||+|++++
T Consensus 79 ~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tNP~d----i~t~~~~~~sg~~~~rviG~g~~lds~R~~~~ 154 (305)
T TIGR01763 79 LPRKPGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSNPLD----AMTYVAWQKSGFPKERVIGQAGVLDSARFRTF 154 (305)
T ss_pred CCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHH----HHHHHHHHHHCcCHHHEEEeccchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999 78888999999999999999 59999999999
Q ss_pred HHHHhCCCCCccceEEEccCCCCceeecccccc----CCCC-CChhHHHHHHHHHHhhHHHHHhhc
Q 024248 203 VAEVLGLDPREVDVPVVGGHAGVTILPLLSQVK----PSCS-LTPTEIDYLTDRIQNGGTEVVEVI 263 (270)
Q Consensus 203 lA~~l~v~~~~v~~~V~G~hg~~~~vp~~S~~~----p~~~-~~~~~~~~i~~~v~~~~~~i~~~k 263 (270)
+|+++++++++|+++||||||+ ++||+||+++ |+.+ ++++++++|.++++++|++|+++|
T Consensus 155 la~~l~v~~~~v~~~v~GeHg~-s~~~~wS~~~i~g~~~~~~~~~~~~~~l~~~v~~~g~~ii~~~ 219 (305)
T TIGR01763 155 IAMELGVSVQDVTACVLGGHGD-AMVPLVRYSTVAGIPVADLISAERIAEIVERTRKGGGEIVNLL 219 (305)
T ss_pred HHHHhCcCHHHeeeeEEecCCC-cEEeeeeeeEECCEEHHHhcCHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999998 6899999986 5544 344558899999999999999974
No 23
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=100.00 E-value=1.2e-41 Score=312.87 Aligned_cols=213 Identities=26% Similarity=0.374 Sum_probs=182.2
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCcc-----EEEEEeCCC----ChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEE
Q 024248 48 KVAVLGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIV 118 (270)
Q Consensus 48 KI~IIGa~G~VGs~la~~l~~~g~~~-----eV~LvD~~~----~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvV 118 (270)
||+||||+|.||+++++.|..+++++ +++|+|+++ ++++++||.|..... ...+..+++..++++|||+|
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~g~~~Dl~d~~~~~-~~~~~~~~~~~~~~~~aDiV 79 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLEGVVMELMDCAFPL-LDGVVPTHDPAVAFTDVDVA 79 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccccceeEeehhcccchh-cCceeccCChHHHhCCCCEE
Confidence 69999988999999999999988875 799999964 357889999986221 12233343545889999999
Q ss_pred EEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhC-CCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeeee-chhhH
Q 024248 119 IIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV-TMLDV 196 (270)
Q Consensus 119 Ii~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG~-t~ldt 196 (270)
|++||.+++++++|.+++..|+++++++++.|++++ |++++|++|||+| ++|+++++.+++++.++||+ |.|||
T Consensus 80 VitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsNPvD----v~t~v~~~~sg~~~~~vig~gt~LDs 155 (324)
T TIGR01758 80 ILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGNPAN----TNALVLSNYAPSIPPKNFSALTRLDH 155 (324)
T ss_pred EEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHH----HHHHHHHHHcCCCCcceEEEeeehHH
Confidence 999999999999999999999999999999999996 9999999999999 67888899998888889999 89999
Q ss_pred HHHHHHHHHHhCCCCCccc-eEEEccCCCCceeeccccccCC--------CC-CChhH--HHHHHHHHHhhHHHHHhhcC
Q 024248 197 VRANTFVAEVLGLDPREVD-VPVVGGHAGVTILPLLSQVKPS--------CS-LTPTE--IDYLTDRIQNGGTEVVEVIR 264 (270)
Q Consensus 197 ~r~~~~lA~~l~v~~~~v~-~~V~G~hg~~~~vp~~S~~~p~--------~~-~~~~~--~~~i~~~v~~~~~~i~~~k~ 264 (270)
+||++++|++++++|++|+ ++||||||+ ++||+||+++.. .+ +.+++ +++|.++++++|++|+++||
T Consensus 156 ~R~r~~la~~l~v~~~~V~~~~V~GeHG~-s~v~~~S~~~v~~g~~~~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~~k~ 234 (324)
T TIGR01758 156 NRALAQVAERAGVPVSDVKNVIIWGNHSS-TQYPDVNHATVTKGGKQKPVREAIKDDAYLDGEFITTVQQRGAAIIRARK 234 (324)
T ss_pred HHHHHHHHHHhCCChhhceEeEEEECCCC-CcccccccceecCCCCccCHHHHhcchhhHHHHHHHHHHhCHHHHHhccC
Confidence 9999999999999999995 699999999 799999999533 22 22222 57899999999999999877
Q ss_pred CC
Q 024248 265 GN 266 (270)
Q Consensus 265 ~~ 266 (270)
|+
T Consensus 235 ~~ 236 (324)
T TIGR01758 235 LS 236 (324)
T ss_pred CC
Confidence 54
No 24
>PTZ00117 malate dehydrogenase; Provisional
Probab=100.00 E-value=4.4e-41 Score=308.87 Aligned_cols=210 Identities=34% Similarity=0.591 Sum_probs=185.5
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC--hhHHHHhhccccCcce-eeeeccCCHHHHhCCCCEEEEc
Q 024248 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTNAVV-RGFLGQQQLEDALTGMDIVIIP 121 (270)
Q Consensus 45 ~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~--~~~~~dl~~~~~~~~~-~~i~~t~d~~~al~~ADvVIi~ 121 (270)
+.+||+|||| |.||+++++.++..++ .+|+|+|++++ .++++|+.|....... ..+..++|++ +++|||+||++
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~-~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~~-~l~~ADiVVit 80 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKNL-GDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGTNNYE-DIKDSDVVVIT 80 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCCC-CeEEEEECCCccchhHHHHHhhhccccCCCeEEEeCCCHH-HhCCCCEEEEC
Confidence 5679999998 9999999999999997 58999999874 5778899887432221 1344567885 89999999999
Q ss_pred CCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeeeec-hhhHHHHH
Q 024248 122 AGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGVT-MLDVVRAN 200 (270)
Q Consensus 122 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG~t-~ldt~r~~ 200 (270)
+|.+++++++|.|++..|.++++++++.++++||+++++++|||+| ++++.+++.+++|++|++|+| .||++|++
T Consensus 81 ag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvsNP~d----i~t~~~~~~s~~p~~rviG~gt~lds~R~~ 156 (319)
T PTZ00117 81 AGVQRKEEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVTNPLD----CMVKVFQEKSGIPSNKICGMAGVLDSSRFR 156 (319)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecChHH----HHHHHHHHhhCCCcccEEEecchHHHHHHH
Confidence 9999999999999999999999999999999999999999999999 678888899999999999995 99999999
Q ss_pred HHHHHHhCCCCCccceEEEccCCCCceeecccccc----CCCC------CChhHHHHHHHHHHhhHHHHHhh
Q 024248 201 TFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVK----PSCS------LTPTEIDYLTDRIQNGGTEVVEV 262 (270)
Q Consensus 201 ~~lA~~l~v~~~~v~~~V~G~hg~~~~vp~~S~~~----p~~~------~~~~~~~~i~~~v~~~~~~i~~~ 262 (270)
+++|+++|++|++++++|+||||+ ++||+||+++ |+.+ +++++++++.++++++|++|+++
T Consensus 157 ~~la~~l~v~~~~v~~~viGeHg~-~~v~~~s~~~v~g~p~~~~~~~~~~~~~~~~~i~~~v~~~g~~ii~~ 227 (319)
T PTZ00117 157 CNLAEKLGVSPGDVSAVVIGGHGD-LMVPLPRYCTVNGIPLSDFVKKGAITEKEINEIIKKTRNMGGEIVKL 227 (319)
T ss_pred HHHHHHhCCCcccceEEEeecCCC-cEEeceeeceECCEEHHHHhhccccCHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999988 7999999995 4322 45666889999999999999997
No 25
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=3.8e-41 Score=307.94 Aligned_cols=212 Identities=30% Similarity=0.482 Sum_probs=187.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC--hhHHHHhhccccC-cceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTN-AVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~--~~~~~dl~~~~~~-~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
|||+|||+ |.||+++++.|+.+|++.+|+|+|+++. .+++.|+.|.... .... + .++|+ +++++||+||++++
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~-i-~~~d~-~~l~~aDiViita~ 76 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVR-I-YAGDY-ADCKGADVVVITAG 76 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeE-E-eeCCH-HHhCCCCEEEEccC
Confidence 79999998 9999999999999998889999999874 5688899987432 2222 2 24677 67999999999999
Q ss_pred CCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeeee-chhhHHHHHHH
Q 024248 124 VPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRANTF 202 (270)
Q Consensus 124 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG~-t~ldt~r~~~~ 202 (270)
.+++++++|.+++..|+++++++++.+++++|+++++++|||+| ++++++++.+|||++||||+ |.||+.|++++
T Consensus 77 ~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~tNP~d----~~~~~~~~~sg~p~~~viG~gt~LDs~R~~~~ 152 (308)
T cd05292 77 ANQKPGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVVTNPVD----VLTYVAYKLSGLPPNRVIGSGTVLDTARFRYL 152 (308)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHH----HHHHHHHHHHCcCHHHeecccchhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999 67888889999999999999 89999999999
Q ss_pred HHHHhCCCCCccceEEEccCCCCceeecccccc----CCC--------CCChhHHHHHHHHHHhhHHHHHhhcCCCC
Q 024248 203 VAEVLGLDPREVDVPVVGGHAGVTILPLLSQVK----PSC--------SLTPTEIDYLTDRIQNGGTEVVEVIRGNW 267 (270)
Q Consensus 203 lA~~l~v~~~~v~~~V~G~hg~~~~vp~~S~~~----p~~--------~~~~~~~~~i~~~v~~~~~~i~~~k~~~~ 267 (270)
+|+++++++++|+++||||||+ +++|+||+++ |+. .++++++++|.++++++|++|+++||.+.
T Consensus 153 la~~~~v~~~~v~~~viGeHg~-~~~~~~S~~~v~g~~~~~~~~~~~~~~~~~~~~~l~~~v~~~g~~ii~~kg~t~ 228 (308)
T cd05292 153 LGEHLGVDPRSVHAYIIGEHGD-SEVAVWSSANIGGVPLDEFCKLCGRPFDEEVREEIFEEVRNAAYEIIERKGATY 228 (308)
T ss_pred HHHHhCCCccceeceeeccCCC-cEEecceeeeECCEEHHHHhhhcccccCHHHHHHHHHHHHHHHHHHHHcCCccH
Confidence 9999999999999999999998 6999999986 432 23445688999999999999999997653
No 26
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=100.00 E-value=5.6e-41 Score=308.22 Aligned_cols=211 Identities=34% Similarity=0.661 Sum_probs=185.2
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC--hhHHHHhhccccCcc-eeeeeccCCHHHHhCCCCEEEEc
Q 024248 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTNAV-VRGFLGQQQLEDALTGMDIVIIP 121 (270)
Q Consensus 45 ~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~--~~~~~dl~~~~~~~~-~~~i~~t~d~~~al~~ADvVIi~ 121 (270)
+.+||+|||+ |.||+++++.++..++. +|+|+|+++. .++++|+.|...... ...+..++|+ ++++|||+||++
T Consensus 5 ~~~KI~IIGa-G~vG~~ia~~la~~gl~-~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~~d~-~~l~~aDiVI~t 81 (321)
T PTZ00082 5 KRRKISLIGS-GNIGGVMAYLIVLKNLG-DVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGTNNY-EDIAGSDVVIVT 81 (321)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCC-eEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEECCCH-HHhCCCCEEEEC
Confidence 4569999997 99999999999999984 6999999875 567888888643221 1234556788 689999999999
Q ss_pred CCCCCCCCC-----chhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeeeec-hhh
Q 024248 122 AGVPRKPGM-----TRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGVT-MLD 195 (270)
Q Consensus 122 ag~~~~~g~-----~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG~t-~ld 195 (270)
+|.++++++ +|.+++..|+++++++++.+++++|++++|++|||+| ++++.+++.+++|++|++|+| .||
T Consensus 82 ag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~sNP~d----i~t~~~~~~sg~p~~rviGlgt~ld 157 (321)
T PTZ00082 82 AGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVITNPLD----VMVKLLQEHSGLPKNKVCGMAGVLD 157 (321)
T ss_pred CCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHH----HHHHHHHHhcCCChhhEEEecCccc
Confidence 999999999 9999999999999999999999999999999999999 678888999999999999995 999
Q ss_pred HHHHHHHHHHHhCCCCCccceEEEccCCCCceeecccccc----CCCC------CChhHHHHHHHHHHhhHHHHHhhc
Q 024248 196 VVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVK----PSCS------LTPTEIDYLTDRIQNGGTEVVEVI 263 (270)
Q Consensus 196 t~r~~~~lA~~l~v~~~~v~~~V~G~hg~~~~vp~~S~~~----p~~~------~~~~~~~~i~~~v~~~~~~i~~~k 263 (270)
+.|+++.+|+++|+++++++++|+||||+ ++||+||+++ |+.+ ++++++++|.++++++|++|+++|
T Consensus 158 s~R~~~~la~~l~v~~~~v~~~viGeHg~-s~v~~~S~~~i~g~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~i~~~~ 234 (321)
T PTZ00082 158 SSRLRTYIAEKLGVNPRDVHASVIGAHGD-KMVPLPRYVTVGGIPLSEFIKKGLITQEEIDEIVERTRNTGKEIVDLL 234 (321)
T ss_pred HHHHHHHHHHHhCCCcccceeeEEecCCC-ceEecceeeEECCEEHHHhhhcccCCHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999988 7999999986 4422 455668899999999999999975
No 27
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=100.00 E-value=4.6e-41 Score=307.48 Aligned_cols=216 Identities=29% Similarity=0.482 Sum_probs=188.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCC----ChhHHHHhhccccCcc-eeeeeccCCHHHHhCCCCEEEEc
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN----TPGVTADISHMDTNAV-VRGFLGQQQLEDALTGMDIVIIP 121 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~----~~~~~~dl~~~~~~~~-~~~i~~t~d~~~al~~ADvVIi~ 121 (270)
|||+|+|++|++|++++..|+..|+.++|+++|+++ ..+..+|+.|...... ...+..++|+ +++++||+||++
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d~-~~l~~aDiViit 79 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSDL-SDVAGSDIVIIT 79 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEECCCH-HHhCCCCEEEEe
Confidence 799999988999999999999999988999999954 2566788887632211 1124445676 569999999999
Q ss_pred CCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeeee-chhhHHHHH
Q 024248 122 AGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRAN 200 (270)
Q Consensus 122 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG~-t~ldt~r~~ 200 (270)
+|.|++++++|.+++..|+++++++++.|.+++|++++|+++||+| ++++++++.+++|++|+||+ |.||+.|++
T Consensus 80 ag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~npvd----~~t~~~~~~~g~~~~~viG~gt~LDs~R~~ 155 (309)
T cd05294 80 AGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTNPVD----VMTYKALKESGFDKNRVFGLGTHLDSLRFK 155 (309)
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCchH----HHHHHHHHhcCCCHHHEeeccchHHHHHHH
Confidence 9999999999999999999999999999999999999999999999 67788889999999999999 799999999
Q ss_pred HHHHHHhCCCCCccceEEEccCCCCceeecccccc----CCCCC---ChhHHHHHHHHHHhhHHHHHhhcCCCCC
Q 024248 201 TFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVK----PSCSL---TPTEIDYLTDRIQNGGTEVVEVIRGNWS 268 (270)
Q Consensus 201 ~~lA~~l~v~~~~v~~~V~G~hg~~~~vp~~S~~~----p~~~~---~~~~~~~i~~~v~~~~~~i~~~k~~~~s 268 (270)
++||+++++++++|+++|+||||+ ++||+||+++ |+.++ .+.++++|.++++++|++|+++||++.+
T Consensus 156 ~~la~~l~v~~~~v~~~viGeHg~-s~~~~~S~~~i~g~~~~~~~~~~~~~~~~i~~~v~~~g~~i~~~kg~t~~ 229 (309)
T cd05294 156 VAIAKHFNVHISEVHTRIIGEHGD-SMVPLISSTSIGGIPIKRFPEYKDFDVEKIVETVKNAGQNIISLKGGSEY 229 (309)
T ss_pred HHHHHHHCcChHHeEEEEEecCCC-ceEeeeeecEECCEEHHHhhcccHHHHHHHHHHHHHHHHHHHHhcCCchh
Confidence 999999999999999999999998 6999999996 54332 2455788999999999999999998754
No 28
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=1.2e-40 Score=306.55 Aligned_cols=215 Identities=26% Similarity=0.392 Sum_probs=180.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCcc-----EEEEEeCCC----ChhHHHHhhccccCcceeeeeccCCHHHHhCCC
Q 024248 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMDTNAVVRGFLGQQQLEDALTGM 115 (270)
Q Consensus 45 ~~mKI~IIGa~G~VGs~la~~l~~~g~~~-----eV~LvD~~~----~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~A 115 (270)
+|.||+||||+|+||+++++.|+.+++++ +|+|+|+++ ..++++|+.|.... ....+..++++.++++||
T Consensus 1 ~~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~-~~~~~~~~~~~~~~l~~a 79 (325)
T cd01336 1 EPIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFP-LLKSVVATTDPEEAFKDV 79 (325)
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhcccc-ccCCceecCCHHHHhCCC
Confidence 46799999999999999999999988775 999999964 35667899887421 111122345777899999
Q ss_pred CEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhC-CCCEEEEecCCCCCcHHHHHHHHHHh-CCCCCCCeeee-c
Q 024248 116 DIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKV-GTYDPKRLLGV-T 192 (270)
Q Consensus 116 DvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~sNPv~~~~~i~t~~~~~~-sg~p~~kviG~-t 192 (270)
|+||++||.+++++++|.+++..|+++++++++.+++++ |+++++++|||+| ++++++++. +++|+++ ||+ |
T Consensus 80 DiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD----~~t~~~~k~~~~~~~~~-ig~gt 154 (325)
T cd01336 80 DVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGNPAN----TNALILLKYAPSIPKEN-FTALT 154 (325)
T ss_pred CEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCcHH----HHHHHHHHHcCCCCHHH-EEeee
Confidence 999999999999999999999999999999999999997 7999999999999 677778888 4777777 777 8
Q ss_pred hhhHHHHHHHHHHHhCCCCCccc-eEEEccCCCCceeecccccc--------CCCCC-ChhH--HHHHHHHHHhhHHHHH
Q 024248 193 MLDVVRANTFVAEVLGLDPREVD-VPVVGGHAGVTILPLLSQVK--------PSCSL-TPTE--IDYLTDRIQNGGTEVV 260 (270)
Q Consensus 193 ~ldt~r~~~~lA~~l~v~~~~v~-~~V~G~hg~~~~vp~~S~~~--------p~~~~-~~~~--~~~i~~~v~~~~~~i~ 260 (270)
.||++||++++|+++++++++|+ .+||||||+ ++||+||+++ |+.++ ++++ +++|.++++++|++|+
T Consensus 155 ~LDs~R~r~~la~~l~v~~~~v~~~~V~GeHG~-s~~~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii 233 (325)
T cd01336 155 RLDHNRAKSQIALKLGVPVSDVKNVIIWGNHSS-TQYPDVNHATVELNGKGKPAREAVKDDAWLNGEFISTVQKRGAAVI 233 (325)
T ss_pred hHHHHHHHHHHHHHhCcChhhceEeEEEEcCCC-CeeeccccceeecCCCCccHHHHhcccchhHHHHHHHHHhhHHHHH
Confidence 99999999999999999999996 569999999 7999999985 33332 2222 5789999999999999
Q ss_pred hhcCCC
Q 024248 261 EVIRGN 266 (270)
Q Consensus 261 ~~k~~~ 266 (270)
++|+|+
T Consensus 234 ~~~~g~ 239 (325)
T cd01336 234 KARKLS 239 (325)
T ss_pred Hccccc
Confidence 986554
No 29
>PRK06223 malate dehydrogenase; Reviewed
Probab=100.00 E-value=9e-40 Score=298.44 Aligned_cols=208 Identities=37% Similarity=0.643 Sum_probs=183.1
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC--hhHHHHhhccccCcc-eeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTNAV-VRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~--~~~~~dl~~~~~~~~-~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
|||+|||+ |.||+++++.++..++. +|+|+|++++ ++..+|+.+...... ...+..++|+ +++++||+||+++|
T Consensus 3 ~KI~VIGa-G~vG~~ia~~la~~~~~-ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~-~~~~~aDiVii~~~ 79 (307)
T PRK06223 3 KKISIIGA-GNVGATLAHLLALKELG-DVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDY-EDIAGSDVVVITAG 79 (307)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCe-EEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCH-HHHCCCCEEEECCC
Confidence 69999998 99999999999999987 9999999874 566778777632211 1124456788 67999999999999
Q ss_pred CCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeeee-chhhHHHHHHH
Q 024248 124 VPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRANTF 202 (270)
Q Consensus 124 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG~-t~ldt~r~~~~ 202 (270)
.|+++|++|.+++.+|+++++++++.+++++|++++|++|||+| ++++++++.+++|++|++|+ |.||++||+++
T Consensus 80 ~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~tNP~d----~~~~~~~~~s~~~~~~viG~gt~lds~r~~~~ 155 (307)
T PRK06223 80 VPRKPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVTNPVD----AMTYVALKESGFPKNRVIGMAGVLDSARFRTF 155 (307)
T ss_pred CCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHH----HHHHHHHHHhCCCcccEEEeCCCcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999 68888889999999999999 59999999999
Q ss_pred HHHHhCCCCCccceEEEccCCCCceeecccccc----CCCC-CChhHHHHHHHHHHhhHHHHHhh
Q 024248 203 VAEVLGLDPREVDVPVVGGHAGVTILPLLSQVK----PSCS-LTPTEIDYLTDRIQNGGTEVVEV 262 (270)
Q Consensus 203 lA~~l~v~~~~v~~~V~G~hg~~~~vp~~S~~~----p~~~-~~~~~~~~i~~~v~~~~~~i~~~ 262 (270)
||+++++++++|+++|+||||+ +++|+||+++ |+.+ ++++.+++|.++++..+++|++.
T Consensus 156 la~~l~v~~~~v~~~viGehg~-s~~p~~S~~~v~g~~~~~~~~~~~~~~l~~~v~~~~~~ii~~ 219 (307)
T PRK06223 156 IAEELNVSVKDVTAFVLGGHGD-SMVPLVRYSTVGGIPLEDLLSKEKLDEIVERTRKGGAEIVGL 219 (307)
T ss_pred HHHHhCcChhhCcccEEcCCCC-cceEchhhCEECCEEHHHhCChHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999988 7999999995 5443 45555789999999999999997
No 30
>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas
Probab=100.00 E-value=3.3e-39 Score=294.11 Aligned_cols=207 Identities=37% Similarity=0.658 Sum_probs=181.3
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC--hhHHHHhhccccCc-ceeeeeccCCHHHHhCCCCEEEEcCCCC
Q 024248 49 VAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTNA-VVRGFLGQQQLEDALTGMDIVIIPAGVP 125 (270)
Q Consensus 49 I~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~--~~~~~dl~~~~~~~-~~~~i~~t~d~~~al~~ADvVIi~ag~~ 125 (270)
|+|||+ |.||+.+++.++..+++ +|+|+|+++. .++.+|+.+..... ....+..++|+ +++++||+||+++|.|
T Consensus 1 I~IIGa-G~vG~~ia~~la~~~l~-eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I~~t~d~-~~l~dADiVIit~g~p 77 (300)
T cd01339 1 ISIIGA-GNVGATLAQLLALKELG-DVVLLDIVEGLPQGKALDISQAAPILGSDTKVTGTNDY-EDIAGSDVVVITAGIP 77 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhCCCc-EEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEEEEcCCH-HHhCCCCEEEEecCCC
Confidence 689998 99999999999999988 9999999875 45667777653211 11224456676 6799999999999999
Q ss_pred CCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeeeec-hhhHHHHHHHHH
Q 024248 126 RKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGVT-MLDVVRANTFVA 204 (270)
Q Consensus 126 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG~t-~ldt~r~~~~lA 204 (270)
++++++|.+++.+|+++++++++.+++++|++++|++|||+| ++++++++.+++|++|++|+| .+|++|+++++|
T Consensus 78 ~~~~~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~sNP~d----i~t~~~~~~s~~~~~rviGlgt~lds~r~~~~la 153 (300)
T cd01339 78 RKPGMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVTNPLD----VMTYVAYKASGFPRNRVIGMAGVLDSARFRYFIA 153 (300)
T ss_pred CCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHH----HHHHHHHHHhCCCHHHEEEecchHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999 688888899999999999995 999999999999
Q ss_pred HHhCCCCCccceEEEccCCCCceeecccccc----CCCC-CChhHHHHHHHHHHhhHHHHHhhc
Q 024248 205 EVLGLDPREVDVPVVGGHAGVTILPLLSQVK----PSCS-LTPTEIDYLTDRIQNGGTEVVEVI 263 (270)
Q Consensus 205 ~~l~v~~~~v~~~V~G~hg~~~~vp~~S~~~----p~~~-~~~~~~~~i~~~v~~~~~~i~~~k 263 (270)
+++++++++|+++|+||||+ +++|+||+++ |+.+ ++++++++|.+++++++++|+++|
T Consensus 154 ~~l~v~~~~v~~~v~G~hg~-~~~~~~s~~~v~g~~~~~~~~~~~~~~~~~~v~~~~~~ii~~k 216 (300)
T cd01339 154 EELGVSVKDVQAMVLGGHGD-TMVPLPRYSTVGGIPLTELITKEEIDEIVERTRNGGAEIVNLL 216 (300)
T ss_pred HHhCCCccceEEEEEeCCCC-cceecceecEECCEEHHHhcChHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999988 6999999996 5443 345568999999999999999977
No 31
>PLN00135 malate dehydrogenase
Probab=100.00 E-value=1.2e-37 Score=284.02 Aligned_cols=187 Identities=25% Similarity=0.425 Sum_probs=160.7
Q ss_pred EEEEEeCCC--C--hhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHH
Q 024248 74 VLHLYDVVN--T--PGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEG 149 (270)
Q Consensus 74 eV~LvD~~~--~--~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~ 149 (270)
.++|+|+++ . .++++||.|+.. +....+..+++..++++|||+||++||.++++|++|.+++..|+++++++++.
T Consensus 15 ~l~L~D~~~~~~~a~g~~~Dl~da~~-~~~~~i~~~~~~y~~~~daDiVVitAG~~~k~g~sR~dll~~N~~I~~~i~~~ 93 (309)
T PLN00135 15 ILHMLDIPPAAEALNGVKMELIDAAF-PLLKGVVATTDVVEACKGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQASA 93 (309)
T ss_pred EEEEecCcccccchhhHHHHHHhhhH-HhcCCcEecCCHHHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 899999987 4 678999999852 11112333456348899999999999999999999999999999999999999
Q ss_pred HhHh-CCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeeee-chhhHHHHHHHHHHHhCCCCCcc-ceEEEccCCCCc
Q 024248 150 IAKC-CPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRANTFVAEVLGLDPREV-DVPVVGGHAGVT 226 (270)
Q Consensus 150 i~~~-~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG~-t~ldt~r~~~~lA~~l~v~~~~v-~~~V~G~hg~~~ 226 (270)
|.++ +|+++++++|||+| ++++++++.+++|++|+||+ |.|||+||++++|+++++++++| +++||||||+ +
T Consensus 94 i~~~~~p~aivivvsNPvD----v~t~~~~~~sg~~~~~vig~gt~LDsaR~r~~la~~l~v~~~~V~~~~VlGeHG~-s 168 (309)
T PLN00135 94 LEKHAAPDCKVLVVANPAN----TNALILKEFAPSIPEKNITCLTRLDHNRALGQISERLGVPVSDVKNVIIWGNHSS-T 168 (309)
T ss_pred HHHhcCCCeEEEEeCCcHH----HHHHHHHHHcCCCCccEEEeeehHHHHHHHHHHHHHhCcChhhceeeEEEEcCCC-c
Confidence 9996 89999999999999 67888899999999999999 89999999999999999999999 7899999999 6
Q ss_pred eeeccccccC--------CCCC-ChhH--HHHHHHHHHhhHHHHHhhcCCC
Q 024248 227 ILPLLSQVKP--------SCSL-TPTE--IDYLTDRIQNGGTEVVEVIRGN 266 (270)
Q Consensus 227 ~vp~~S~~~p--------~~~~-~~~~--~~~i~~~v~~~~~~i~~~k~~~ 266 (270)
+||+||+++. +.++ .+++ +++|.++++++|++|+++|+|+
T Consensus 169 ~v~~~S~a~v~~~~~g~p~~e~~~~~~~~~~~i~~~v~~~g~~Ii~~~kg~ 219 (309)
T PLN00135 169 QYPDVNHATVKTPSGEKPVRELVADDAWLNGEFITTVQQRGAAIIKARKLS 219 (309)
T ss_pred eeeccccceEecCCCCcCHHHHhCchhhHHHHHHHHHHHHHHHHHHccCcc
Confidence 9999999853 3332 3333 5789999999999999985443
No 32
>cd05295 MDH_like Malate dehydrogenase-like. These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=4.3e-37 Score=290.94 Aligned_cols=212 Identities=16% Similarity=0.221 Sum_probs=175.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCcc-----EEEEEeCC--C--ChhHHHHhhccccCcceeeeeccCCHHHHhCCC
Q 024248 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVS-----VLHLYDVV--N--TPGVTADISHMDTNAVVRGFLGQQQLEDALTGM 115 (270)
Q Consensus 45 ~~mKI~IIGa~G~VGs~la~~l~~~g~~~-----eV~LvD~~--~--~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~A 115 (270)
++.+|+|+||+|.+|+++.+.++...+++ .++|+|+. + .+|+++||.|+. ++.+..+..+++..++++||
T Consensus 122 ~p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a-~pll~~v~i~~~~~ea~~da 200 (452)
T cd05295 122 NPLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLA-FPLLRGISVTTDLDVAFKDA 200 (452)
T ss_pred CceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhH-HhhcCCcEEEECCHHHhCCC
Confidence 45699999999999999999999866554 69999994 3 378899999985 22222111223445899999
Q ss_pred CEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCC--CCEEEEecCCCCCcHHHHHHHHHHhC-CCCCCCeeeec
Q 024248 116 DIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCP--KAIVNLISNPVNSTVPIAAEVFKKVG-TYDPKRLLGVT 192 (270)
Q Consensus 116 DvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p--~a~viv~sNPv~~~~~i~t~~~~~~s-g~p~~kviG~t 192 (270)
|+||+++|.|+++|++|.|++..|.++++++++.|.+++| ++++|++|||+| ++++++++.+ ++|++||+|++
T Consensus 201 DvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~tNPvD----~~t~i~~k~apgiP~~rVig~g 276 (452)
T cd05295 201 HVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGRTFLN----LKTSILIKYAPSIPRKNIIAVA 276 (452)
T ss_pred CEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHH----HHHHHHHHHcCCCCHHHEEEec
Confidence 9999999999999999999999999999999999999999 889999999999 5666677777 99999999997
Q ss_pred hhhHHHHHHHHHHHhCCCCCcc-ceEEEccCCCCceeecccccc----------------CCCCC-ChhH--HHHHHHHH
Q 024248 193 MLDVVRANTFVAEVLGLDPREV-DVPVVGGHAGVTILPLLSQVK----------------PSCSL-TPTE--IDYLTDRI 252 (270)
Q Consensus 193 ~ldt~r~~~~lA~~l~v~~~~v-~~~V~G~hg~~~~vp~~S~~~----------------p~~~~-~~~~--~~~i~~~v 252 (270)
.+|++|++++||+++|+++++| +++||||||+ ++||+||+++ |+.++ .+++ .+++.+.|
T Consensus 277 tlds~R~r~~LA~kl~V~~~~V~~~~VwGeHG~-sqvpd~S~a~V~G~~~a~~~p~~~~~pl~e~i~d~~w~~~~~~~~v 355 (452)
T cd05295 277 RLQENRAKALLARKLNVNSAGIKDVIVWGNIGG-NTYIDLSKARVYRYDSAIWGPPNYSRPVLELVHDSKWINGEFVATL 355 (452)
T ss_pred chHHHHHHHHHHHHhCcCHHHceeeEEEEccCC-ceeeeeeEEEEcccccccccccccCccHHHHhcchhhhHHHHHHHH
Confidence 7889999999999999999999 6799999998 7999999994 22222 2333 35688889
Q ss_pred HhhHHHHHhhcCC
Q 024248 253 QNGGTEVVEVIRG 265 (270)
Q Consensus 253 ~~~~~~i~~~k~~ 265 (270)
++++. ++||.
T Consensus 356 ~~rg~---~rkgs 365 (452)
T cd05295 356 KSLSS---SLNHE 365 (452)
T ss_pred HHHHH---hccCC
Confidence 98888 55543
No 33
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=100.00 E-value=1.5e-36 Score=271.70 Aligned_cols=182 Identities=35% Similarity=0.526 Sum_probs=163.4
Q ss_pred EEEEcCCCchHHHHHHHHHhCC--CccEEEEEeCCCC--hhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCCC
Q 024248 49 VAVLGAAGGIGQPLAMLMKINP--LVSVLHLYDVVNT--PGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGV 124 (270)
Q Consensus 49 I~IIGa~G~VGs~la~~l~~~g--~~~eV~LvD~~~~--~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag~ 124 (270)
|+||||+|.+|.++++.|+..+ ...+|+|+|++++ ++.++|+.|.........+..++|++++++|||+||+++|.
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDiVv~t~~~ 80 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADVVIITAGV 80 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCEEEECCCC
Confidence 6899988999999999999999 7779999999874 56778888875332112345677877999999999999999
Q ss_pred CCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeeeechhhHHHHHHHHH
Q 024248 125 PRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGVTMLDVVRANTFVA 204 (270)
Q Consensus 125 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG~t~ldt~r~~~~lA 204 (270)
++++|++|.+++.+|+++++++++.++++||++|++++|||+| ++++++++.+|+|+.|+||+|.+|+.|+++++|
T Consensus 81 ~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~tNP~d----~~t~~~~~~sg~~~~kviG~~~ld~~r~~~~la 156 (263)
T cd00650 81 GRKPGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVSNPVD----IITYLVWRYSGLPKEKVIGLGTLDPIRFRRILA 156 (263)
T ss_pred CCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHH----HHHHHHHHHhCCCchhEEEeecchHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999 688888999999999999995599999999999
Q ss_pred HHhCCCCCccceEEEccCCCCceeecccccc
Q 024248 205 EVLGLDPREVDVPVVGGHAGVTILPLLSQVK 235 (270)
Q Consensus 205 ~~l~v~~~~v~~~V~G~hg~~~~vp~~S~~~ 235 (270)
+++++++++|+++|||+||+ +++|+||+++
T Consensus 157 ~~l~v~~~~v~~~v~G~hg~-~~~~~~s~~~ 186 (263)
T cd00650 157 EKLGVDPDDVKVYILGEHGG-SQVPDWSTVR 186 (263)
T ss_pred HHhCCCccceEEEEEEcCCC-ceEeccccch
Confidence 99999999999999999998 6899999874
No 34
>TIGR01756 LDH_protist lactate dehydrogenase. This model represents a family of protist lactate dehydrogenases which have aparrently evolved from a recent protist malate dehydrogenase ancestor. Lactate dehydrogenase converts the hydroxyl at C-2 of lactate to a carbonyl in the product, pyruvate. The preference of this enzyme for NAD or NADP has not been determined. A critical residue in malate dehydrogenase, arginine-91 (T. vaginalis numbering) has been mutated to a leucine, eliminating the positive charge which complemeted the carboxylate in malate which is absent in lactate. Several other more subtle changes are proposed to make the active site smaller to accomadate the less bulky lactate molecule.
Probab=100.00 E-value=2.1e-36 Score=276.52 Aligned_cols=192 Identities=23% Similarity=0.280 Sum_probs=162.7
Q ss_pred hCCCccEEEEEeCCC--C--hhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCCCCCCCCCchhhhHHhhHHHH
Q 024248 68 INPLVSVLHLYDVVN--T--PGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIV 143 (270)
Q Consensus 68 ~~g~~~eV~LvD~~~--~--~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag~~~~~g~~r~~~~~~N~~i~ 143 (270)
.+++ .++|+|+++ . +|+++||.|+. .+.......+++++++++|||+||++||.++++|++|.+++..|++++
T Consensus 13 ~~~~--~l~L~D~~~~~~~a~g~a~Dl~d~~-~~~~~~~i~~~~~~~~~~daDiVVitaG~~~k~g~tR~dll~~N~~I~ 89 (313)
T TIGR01756 13 NRPV--CLHLLEIPPALNRLEALAMELEDCA-FPNLAGTIVTTKLEEAFKDIDCAFLVASVPLKPGEVRADLLTKNTPIF 89 (313)
T ss_pred CCeE--EEEEecCCCccchhHhHHHHHHHhc-cccCCceEecCCHHHHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHH
Confidence 3455 899999987 3 67899999986 443322223568878999999999999999999999999999999999
Q ss_pred HHHHHHHhHhCCC-CEEEEecCCCCCcHHHHHHHH-HHhCCCCCCCeeee-chhhHHHHHHHHHHHhCCCCCccce-EEE
Q 024248 144 KTLCEGIAKCCPK-AIVNLISNPVNSTVPIAAEVF-KKVGTYDPKRLLGV-TMLDVVRANTFVAEVLGLDPREVDV-PVV 219 (270)
Q Consensus 144 ~~i~~~i~~~~p~-a~viv~sNPv~~~~~i~t~~~-~~~sg~p~~kviG~-t~ldt~r~~~~lA~~l~v~~~~v~~-~V~ 219 (270)
+++++.|++++|+ +++|++|||+| ++++++ ++.+|||++ +||+ |.|||+||++++|++++++|++|+. +||
T Consensus 90 ~~i~~~i~~~a~~~~ivivvtNPvD----v~t~v~~~~~sg~p~~-vig~gt~LDsaR~r~~la~~l~v~~~~V~~~~V~ 164 (313)
T TIGR01756 90 KATGEALSEYAKPTVKVLVIGNPVN----TNCLVAMLHAPKLSAE-NFSSLCMLDHNRAVSRIASKLKVPVDHIYHVVVW 164 (313)
T ss_pred HHHHHHHHhhCCCCeEEEEeCCchH----HHHHHHHHHcCCCCHH-HEEecccHHHHHHHHHHHHHhCcChhheeeeEEE
Confidence 9999999999965 78999999999 577777 699999999 9999 8999999999999999999999965 599
Q ss_pred ccCCCCceeeccccccC------CCC---CChh-HHHHHHHHHHhhHHHHHhhcCCCCC
Q 024248 220 GGHAGVTILPLLSQVKP------SCS---LTPT-EIDYLTDRIQNGGTEVVEVIRGNWS 268 (270)
Q Consensus 220 G~hg~~~~vp~~S~~~p------~~~---~~~~-~~~~i~~~v~~~~~~i~~~k~~~~s 268 (270)
||||+ ++||+||+++. +.. ++++ .+++|.++|+++|++|+++||++.+
T Consensus 165 GeHG~-s~vp~~S~~~V~~~G~~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~kg~t~~ 222 (313)
T TIGR01756 165 GNHAE-SMVADLTHAEFTKNGKHQKVFDELCRDYPEPDFFEVIAQRAWKILEMRGFTSA 222 (313)
T ss_pred ECCCC-ceeecccccEEecCCeehhHhhhcCcHhHHHHHHHHHHHHHHHHHhCcCCcch
Confidence 99998 69999999952 221 2331 3678999999999999999987643
No 35
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=99.97 E-value=2.3e-31 Score=217.36 Aligned_cols=139 Identities=40% Similarity=0.639 Sum_probs=124.5
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCC--ChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGV 124 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~--~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag~ 124 (270)
|||+|||++|.||+++++.|+.+++++|++|+|+++ .+++++||.|..............++ ++++|||+||+++|.
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~-~~~~~aDivvitag~ 79 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGDY-EALKDADIVVITAGV 79 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESSG-GGGTTESEEEETTST
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcccccccccccc-cccccccEEEEeccc
Confidence 799999988999999999999999999999999986 47889999998654433332334455 889999999999999
Q ss_pred CCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeee
Q 024248 125 PRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLG 190 (270)
Q Consensus 125 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG 190 (270)
++++|++|.+++..|+++++++++.+.+++|+++++++|||+| ++++++++.++||++|+||
T Consensus 80 ~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvtNPvd----~~t~~~~~~s~~~~~kviG 141 (141)
T PF00056_consen 80 PRKPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVTNPVD----VMTYVAQKYSGFPPNKVIG 141 (141)
T ss_dssp SSSTTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-SSSHH----HHHHHHHHHHTSSGGGEEE
T ss_pred cccccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeCCcHH----HHHHHHHHhhCcCcccCcC
Confidence 9999999999999999999999999999999999999999999 7899999999999999998
No 36
>KOG1496 consensus Malate dehydrogenase [Energy production and conversion]
Probab=99.96 E-value=1e-29 Score=219.18 Aligned_cols=218 Identities=26% Similarity=0.401 Sum_probs=188.1
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCcc-----EEEEEeCCCC----hhHHHHhhccccCcceeeeeccCCHHHHhCCC
Q 024248 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVNT----PGVTADISHMDTNAVVRGFLGQQQLEDALTGM 115 (270)
Q Consensus 45 ~~mKI~IIGa~G~VGs~la~~l~~~g~~~-----eV~LvD~~~~----~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~A 115 (270)
++.+|+|+||+|.||.++.+.++....++ .++|+|+... +|..++|.|+ .+|.++.+..++|..++++|.
T Consensus 3 epirVlVtGAAGqI~ysll~~ia~G~vfG~dQPiiL~lLdi~~~~~~LegV~mELqD~-a~PlL~~Vvattd~~~afkdv 81 (332)
T KOG1496|consen 3 EPIRVLVTGAAGQIGYSLLPMIARGIVFGKDQPIILHLLDIPPMMSVLEGVKMELQDC-ALPLLKGVVATTDEVEAFKDV 81 (332)
T ss_pred CceEEEeecccchhhHHHHHHHcCceeecCCCceEEEeeCCchHHHHHHHHHHHHHhh-hhhHHHhhhcccChhhhhccC
Confidence 35689999999999999999887642221 8899999762 6778899998 467777666788999999999
Q ss_pred CEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhC-CCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeeeechh
Q 024248 116 DIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGVTML 194 (270)
Q Consensus 116 DvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG~t~l 194 (270)
|+.|+..+.|+++|++|.|++..|..+++.-..++++|+ |+..+++++||+++++.++. +.+..+|.+++-++|.|
T Consensus 82 ~~ailvGa~PR~eGMERkDll~~NvkIfk~Qg~AL~k~A~~~~KVlVVgNPaNTNali~~---k~ApsIP~kNfs~lTRL 158 (332)
T KOG1496|consen 82 DVAILVGAMPRREGMERKDLLSANVKIFKSQGAALEKYAKPNVKVLVVGNPANTNALILK---KFAPSIPEKNFSALTRL 158 (332)
T ss_pred cEEEEeccccCcccchhhhHHhhcceeehhhhHHHHHhcCCCceEEEecCccccchhHHh---hhCCCCchhcchhhhhh
Confidence 999999999999999999999999999999999999998 89999999999999876665 45667899999999999
Q ss_pred hHHHHHHHHHHHhCCCCCcc-ceEEEccCCCCceeecccccc--------CCCC-CChhHH--HHHHHHHHhhHHHHHhh
Q 024248 195 DVVRANTFVAEVLGLDPREV-DVPVVGGHAGVTILPLLSQVK--------PSCS-LTPTEI--DYLTDRIQNGGTEVVEV 262 (270)
Q Consensus 195 dt~r~~~~lA~~l~v~~~~v-~~~V~G~hg~~~~vp~~S~~~--------p~~~-~~~~~~--~~i~~~v~~~~~~i~~~ 262 (270)
|..|...++|.++|+..++| +..+||+|.. |++|++-+++ |..+ +.++.| .++.+.|+++|..|++.
T Consensus 159 DhNRA~~QlA~klgv~~~~VkNviIWGNHSs-TQyPD~~hA~V~~~~~~~~v~e~v~d~~wL~g~Fi~tVQkRGaavi~a 237 (332)
T KOG1496|consen 159 DHNRALAQLALKLGVPVSDVKNVIIWGNHSS-TQYPDVNHATVNTNGGEKPVKEAVKDDAWLQGEFIETVQKRGAAVIKA 237 (332)
T ss_pred chhhHHHHHHHhhCCchhhcceeEEeccccc-ccCCCccceeeeccCCcccHHHHhccchhhccchhhHHHhcchHhhhh
Confidence 99999999999999999999 8999999976 8999999996 3333 445556 57999999999999998
Q ss_pred cCCCC
Q 024248 263 IRGNW 267 (270)
Q Consensus 263 k~~~~ 267 (270)
++-++
T Consensus 238 rk~SS 242 (332)
T KOG1496|consen 238 RKLSS 242 (332)
T ss_pred hhhhh
Confidence 76554
No 37
>cd05197 GH4_glycoside_hydrolases Glycoside Hydrases Family 4. Glycoside hydrolases cleave glycosidic bonds to release smaller sugars from oligo- or polysaccharides. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by GH4 glycoside hydrolases. Other organisms (such as archaea and Thermotoga maritima) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. GH4 family members include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. They require two cofactors, NAD+ and a divalent metal (Mn2+, Ni2+, Mg2+), for activity. Some also require reducing conditions. GH4 glycoside hydrolases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families in
Probab=99.92 E-value=4.6e-24 Score=202.61 Aligned_cols=171 Identities=24% Similarity=0.309 Sum_probs=131.4
Q ss_pred CeEEEEcCCCchHHHHHH----HHHhCC--C-ccEEEEEeCCCChh-H----HHHhhccccCcceeeeeccCCHHHHhCC
Q 024248 47 FKVAVLGAAGGIGQPLAM----LMKINP--L-VSVLHLYDVVNTPG-V----TADISHMDTNAVVRGFLGQQQLEDALTG 114 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~----~l~~~g--~-~~eV~LvD~~~~~~-~----~~dl~~~~~~~~~~~i~~t~d~~~al~~ 114 (270)
|||+|||| |. +... .|+... + .+||+|+|++++.- . +..+.+. ....++ +..|+|.++|++|
T Consensus 1 ~KI~iIGg-GS---~~tp~li~~l~~~~~~l~~~ei~L~Did~~Rl~~v~~l~~~~~~~-~g~~~~-v~~ttD~~~Al~g 74 (425)
T cd05197 1 VKIAIIGG-GS---SFTPELVSGLLKTPEELPISEVTLYDIDEERLDIILTIAKRYVEE-VGADIK-FEKTMDLEDAIID 74 (425)
T ss_pred CEEEEECC-ch---HhHHHHHHHHHcChhhCCCCEEEEEcCCHHHHHHHHHHHHHHHHh-hCCCeE-EEEeCCHHHHhCC
Confidence 79999999 54 3443 333322 2 36999999997421 1 1222222 122333 4678899999999
Q ss_pred CCEEEEcCCCCC------------CCC---C-----chhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCCCcHHHHH
Q 024248 115 MDIVIIPAGVPR------------KPG---M-----TRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAA 174 (270)
Q Consensus 115 ADvVIi~ag~~~------------~~g---~-----~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t 174 (270)
|||||.+..++. +.| + .......+|+++++++++.|+++||++|+|++|||++ ++|
T Consensus 75 ADfVi~~irvGg~~~r~~De~Iplk~G~~gqeT~G~GG~~~alrni~ii~~i~~~i~~~~P~a~lin~TNP~d----i~t 150 (425)
T cd05197 75 ADFVINQFRVGGLTYREKDEQIPLKYGVIGQETVGPGGTFSGLRQIPYVLDIARKXEKLSPDAWYLNFTNPAG----EVT 150 (425)
T ss_pred CCEEEEeeecCChHHHHHHHhHHHHcCcccccccCcchhhhhhhhHHHHHHHHHHHHHhCCCcEEEecCChHH----HHH
Confidence 999999865432 111 1 1344567999999999999999999999999999999 788
Q ss_pred HHHHHhCCCCCCCeeeechhhHHHHHHHHHHHhCCCCCccceEEEc-cCCCCceeecccccc
Q 024248 175 EVFKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG-GHAGVTILPLLSQVK 235 (270)
Q Consensus 175 ~~~~~~sg~p~~kviG~t~ldt~r~~~~lA~~l~v~~~~v~~~V~G-~hg~~~~vp~~S~~~ 235 (270)
+++++. +|+.|+||+|.. +.|+++.+|+.+|+++++|+++|+| ||| |+||+++
T Consensus 151 ~a~~~~--~p~~rviG~c~~-~~r~~~~ia~~lgv~~~~v~~~v~GlnHg-----~~~s~~~ 204 (425)
T cd05197 151 EAVRRY--VPPEKAVGLCNV-PIGVMEIVAKLLGESEEKVDWQYAGLNHG-----IWLNRVR 204 (425)
T ss_pred HHHHHh--CCCCcEEEECCC-HHHHHHHHHHHhCCCHHHeEEEEEeccCe-----EeeEeEE
Confidence 888887 488999999877 8999999999999999999999999 997 7899885
No 38
>PRK15076 alpha-galactosidase; Provisional
Probab=99.91 E-value=1.1e-23 Score=200.42 Aligned_cols=165 Identities=21% Similarity=0.296 Sum_probs=129.0
Q ss_pred CeEEEEcCCCchHHHHHH--HHH-hCCCcc-EEEEEeCCCChhH-HHH-hhcccc--CcceeeeeccCCHHHHhCCCCEE
Q 024248 47 FKVAVLGAAGGIGQPLAM--LMK-INPLVS-VLHLYDVVNTPGV-TAD-ISHMDT--NAVVRGFLGQQQLEDALTGMDIV 118 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~--~l~-~~g~~~-eV~LvD~~~~~~~-~~d-l~~~~~--~~~~~~i~~t~d~~~al~~ADvV 118 (270)
+||+|||| |.+|.+.++ .++ ..++.. ||+|+|+++.... ... +.+... .... .+..|+|++++++|||+|
T Consensus 2 ~KIaIIGa-Gsvg~~~~~~~~i~~~~~l~~~evvLvDid~er~~~~~~l~~~~~~~~~~~~-~i~~ttD~~eal~dADfV 79 (431)
T PRK15076 2 PKITFIGA-GSTVFTKNLLGDILSVPALRDAEIALMDIDPERLEESEIVARKLAESLGASA-KITATTDRREALQGADYV 79 (431)
T ss_pred cEEEEECC-CHHHhHHHHHHHHhhCccCCCCEEEEECCCHHHHHHHHHHHHHHHHhcCCCe-EEEEECCHHHHhCCCCEE
Confidence 69999998 999988776 454 345544 9999999874222 111 222211 1222 245678988999999999
Q ss_pred EEcCCCC-CCCC--------------Cchhhh--------HHhhHHHHHHHHHHHhHhCCCCEEEEecCCCCCcHHHHHH
Q 024248 119 IIPAGVP-RKPG--------------MTRDDL--------FNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAE 175 (270)
Q Consensus 119 Ii~ag~~-~~~g--------------~~r~~~--------~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~ 175 (270)
|++++.+ .+++ ++|.+. +.+|+++++++++.|+++||++|+|++|||++ ++|+
T Consensus 80 v~ti~vg~~~~~~~~De~Iplk~G~~~~r~et~G~GG~~~~~r~i~~i~~i~~~i~~~~p~a~iin~tNP~d----ivt~ 155 (431)
T PRK15076 80 INAIQVGGYEPCTVTDFEIPKKYGLRQTIGDTLGIGGIMRALRTIPVLLDICEDMEEVCPDALLLNYVNPMA----MNTW 155 (431)
T ss_pred eEeeeeCCcchhhhhhhhhHHHcCCeeecccCcCccchhhhhhhHHHHHHHHHHHHHHCCCeEEEEcCChHH----HHHH
Confidence 9999886 3334 344455 89999999999999999999999999999999 7888
Q ss_pred HHHHhCCCCCCCeeeec--hhhHHHHHHHHHHHhCCCCCccceEEEc-cCC
Q 024248 176 VFKKVGTYDPKRLLGVT--MLDVVRANTFVAEVLGLDPREVDVPVVG-GHA 223 (270)
Q Consensus 176 ~~~~~sg~p~~kviG~t--~ldt~r~~~~lA~~l~v~~~~v~~~V~G-~hg 223 (270)
+++ ++|+.||||+| .+++. +.+|+.+|+++++|++++.| ||-
T Consensus 156 ~~~---~~~~~rviG~c~~~~~~~---~~ia~~l~v~~~~v~~~~~GlNH~ 200 (431)
T PRK15076 156 AMN---RYPGIKTVGLCHSVQGTA---EQLARDLGVPPEELRYRCAGINHM 200 (431)
T ss_pred HHh---cCCCCCEEEECCCHHHHH---HHHHHHhCCCHHHeEEEEEeecch
Confidence 876 68889999996 56764 88999999999999999999 884
No 39
>cd05296 GH4_P_beta_glucosidase Glycoside Hydrolases Family 4; Phospho-beta-glucosidase. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases such as the phospho-beta-glucosidases. Other organisms (such as archaea and Thermotoga maritima ) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. The 6-phospho-beta-glucosidase from Thermotoga maritima hydrolylzes cellobiose 6-phosphate (6P) into glucose-6P and glucose, in an NAD+ and Mn2+ dependent fashion. The Escherichia coli 6-phospho-beta-glucosidase (also called celF) hydrolyzes a variety of phospho-beta-glucosides including cellobiose-6P, salicin-6P, arbutin-6P, and gentobiose-6P. Phospho-beta-glucosidases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein
Probab=99.89 E-value=9.7e-23 Score=193.26 Aligned_cols=166 Identities=21% Similarity=0.308 Sum_probs=127.1
Q ss_pred CeEEEEcCCCchHHH-HHHHHHhC--CC-ccEEEEEeCC-CChh-----HHHHhhccccCcceeeeeccCCHHHHhCCCC
Q 024248 47 FKVAVLGAAGGIGQP-LAMLMKIN--PL-VSVLHLYDVV-NTPG-----VTADISHMDTNAVVRGFLGQQQLEDALTGMD 116 (270)
Q Consensus 47 mKI~IIGa~G~VGs~-la~~l~~~--g~-~~eV~LvD~~-~~~~-----~~~dl~~~~~~~~~~~i~~t~d~~~al~~AD 116 (270)
|||+|||| |.+-.. +...|+.. .+ .+||+|+|++ +.+- .+..+... ....++ +..|+|+++|++|||
T Consensus 1 ~KI~iIGa-GS~~tp~li~~l~~~~~~l~~~ei~L~Did~~~rl~~v~~~~~~~~~~-~~~~~~-v~~t~d~~~al~gad 77 (419)
T cd05296 1 MKLTIIGG-GSSYTPELIEGLIRRYEELPVTELVLVDIDEEEKLEIVGALAKRMVKK-AGLPIK-VHLTTDRREALEGAD 77 (419)
T ss_pred CEEEEECC-chHhHHHHHHHHHhccccCCCCEEEEecCChHHHHHHHHHHHHHHHHh-hCCCeE-EEEeCCHHHHhCCCC
Confidence 79999999 654322 22333332 22 4799999999 4321 11222222 122333 466889999999999
Q ss_pred EEEEcCCCCCCCCCchhh--------------------hHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHH
Q 024248 117 IVIIPAGVPRKPGMTRDD--------------------LFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEV 176 (270)
Q Consensus 117 vVIi~ag~~~~~g~~r~~--------------------~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~ 176 (270)
+||++++++..++.++.+ +..+|+++++++++.|+++||++|+|++|||++ ++|++
T Consensus 78 fVi~~~~vg~~~~r~~de~i~~~~Gi~gqET~G~GG~~~a~rni~ii~~i~~~i~~~~Pda~lin~TNP~~----ivt~a 153 (419)
T cd05296 78 FVFTQIRVGGLEARALDERIPLKHGVIGQETTGAGGFAKALRTIPVILDIAEDVEELAPDAWLINFTNPAG----IVTEA 153 (419)
T ss_pred EEEEEEeeCCcchhhhhhhhHHHcCCccccCCCcchHHHhhhhHHHHHHHHHHHHHHCCCeEEEEecCHHH----HHHHH
Confidence 999999877655443333 367899999999999999999999999999999 78898
Q ss_pred HHHhCCCCCCCeeeechhhHHHHHHHHHHHhCCCCCccceEEEc-cCC
Q 024248 177 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG-GHA 223 (270)
Q Consensus 177 ~~~~sg~p~~kviG~t~ldt~r~~~~lA~~l~v~~~~v~~~V~G-~hg 223 (270)
+++.+ +.|+||+|..+ .|+++.+|+.+|+++++++++|+| ||-
T Consensus 154 ~~k~~---~~rviGlc~~~-~r~~~~ia~~lg~~~~~v~~~v~GlNH~ 197 (419)
T cd05296 154 VLRHT---GDRVIGLCNVP-IGLQRRIAELLGVDPEDVFIDYAGLNHL 197 (419)
T ss_pred HHHhc---cCCEEeeCCcH-HHHHHHHHHHhCCCHHHceEEEEecccc
Confidence 88875 78999999774 799999999999999999999999 994
No 40
>cd05297 GH4_alpha_glucosidase_galactosidase Glycoside Hydrolases Family 4; Alpha-glucosidases and alpha-galactosidases. linked to 3D####ucture
Probab=99.86 E-value=2.6e-21 Score=184.22 Aligned_cols=167 Identities=22% Similarity=0.237 Sum_probs=129.3
Q ss_pred CeEEEEcCCCchHHHHHH--HHHhC-CCc-cEEEEEeCCCCh--hHHHHhhcccc--CcceeeeeccCCHHHHhCCCCEE
Q 024248 47 FKVAVLGAAGGIGQPLAM--LMKIN-PLV-SVLHLYDVVNTP--GVTADISHMDT--NAVVRGFLGQQQLEDALTGMDIV 118 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~--~l~~~-g~~-~eV~LvD~~~~~--~~~~dl~~~~~--~~~~~~i~~t~d~~~al~~ADvV 118 (270)
+||+|||| |.+|.+.+. .++.. .+. .+|+|+|++++. ....++.+... .... .+..++|++++++|||+|
T Consensus 1 ~KIaIIGa-Gs~G~a~a~~~~i~~~~~~~g~eV~L~Did~e~l~~~~~~~~~~~~~~~~~~-~I~~ttD~~eal~~AD~V 78 (423)
T cd05297 1 IKIAFIGA-GSVVFTKNLVGDLLKTPELSGSTIALMDIDEERLETVEILAKKIVEELGAPL-KIEATTDRREALDGADFV 78 (423)
T ss_pred CeEEEECC-ChHHhHHHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHhcCCCe-EEEEeCCHHHHhcCCCEE
Confidence 58999998 999999776 34322 232 299999998742 22233332211 1112 245678999999999999
Q ss_pred EEcCCCCCCCCCch----------------------hhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHH
Q 024248 119 IIPAGVPRKPGMTR----------------------DDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEV 176 (270)
Q Consensus 119 Ii~ag~~~~~g~~r----------------------~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~ 176 (270)
|++++.+..++.++ .....+|...+.++++.++++||+++++++|||++ ++|++
T Consensus 79 i~ai~~~~~~~~~~de~i~~K~g~~~~~~~t~g~ggi~~~~~s~~~i~~ia~~i~~~~p~a~~i~~tNPv~----i~t~~ 154 (423)
T cd05297 79 INTIQVGGHEYTETDFEIPEKYGYYQTVGDTSGPGGIFRALRTIPVLLDIARDIEELCPDAWLLNYANPMA----ELTWA 154 (423)
T ss_pred EEeeEecCccchhhhhhhHHHcCeeeeccCCCcHHHHHHHHhhHHHHHHHHHHHHHHCCCCEEEEcCChHH----HHHHH
Confidence 99997654443332 34567899999999999999999999999999999 78999
Q ss_pred HHHhCCCCCCCeeeechhhHHHHHHHHHHHhCCCCCccceEEEc-cCC
Q 024248 177 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG-GHA 223 (270)
Q Consensus 177 ~~~~sg~p~~kviG~t~ldt~r~~~~lA~~l~v~~~~v~~~V~G-~hg 223 (270)
+++.++ .|++|+|.. +.++++.+|+.+|+++++|+++++| ||.
T Consensus 155 ~~k~~~---~rviG~c~~-~~~~~~~~a~~l~~~~~~v~~~~~GlNH~ 198 (423)
T cd05297 155 LNRYTP---IKTVGLCHG-VQGTAEQLAKLLGEPPEEVDYQVAGINHM 198 (423)
T ss_pred HHHhCC---CCEEEECCc-HHHHHHHHHHHhCCCHHHeEEEEEeeccH
Confidence 988765 799999865 6789999999999999999999999 884
No 41
>cd05298 GH4_GlvA_pagL_like Glycoside Hydrolases Family 4; GlvA- and pagL-like glycosidases. Bacillus subtilis GlvA and Clostridium acetobutylicum pagL are 6-phospho-alpha-glucosidase, catalyzing the hydrolysis of alpha-glucopyranoside bonds to release glucose from oligosaccharides. The substrate specificities of other members of this subgroup are unknown. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP_PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases, which include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. Members of this subfamily are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductas
Probab=99.85 E-value=2.7e-20 Score=177.24 Aligned_cols=167 Identities=23% Similarity=0.313 Sum_probs=123.7
Q ss_pred CeEEEEcCCCchHH-HHHHHHHhC--CC-ccEEEEEeCCCChh-HH----HHhhccccCcceeeeeccCCHHHHhCCCCE
Q 024248 47 FKVAVLGAAGGIGQ-PLAMLMKIN--PL-VSVLHLYDVVNTPG-VT----ADISHMDTNAVVRGFLGQQQLEDALTGMDI 117 (270)
Q Consensus 47 mKI~IIGa~G~VGs-~la~~l~~~--g~-~~eV~LvD~~~~~~-~~----~dl~~~~~~~~~~~i~~t~d~~~al~~ADv 117 (270)
|||+|||| |..=+ .+..-|+.. .+ .++|+|+|+++..- .+ ..+.+. ....++ +..|+|.++|++||||
T Consensus 1 ~KI~iIGa-GS~~tp~li~~l~~~~~~l~~~ei~L~DId~~rl~~v~~l~~~~~~~-~g~~~~-v~~Ttdr~eAl~gADf 77 (437)
T cd05298 1 FKIVIAGG-GSTYTPGIVKSLLDRKEDFPLRELVLYDIDAERQEKVAEAVKILFKE-NYPEIK-FVYTTDPEEAFTDADF 77 (437)
T ss_pred CeEEEECC-cHHHHHHHHHHHHhCcccCCCCEEEEECCCHHHHHHHHHHHHHHHHh-hCCCeE-EEEECCHHHHhCCCCE
Confidence 79999999 54311 122233333 23 36999999997421 12 222222 122333 5678899999999999
Q ss_pred EEEcCCCCC------------CCC--------CchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHHH
Q 024248 118 VIIPAGVPR------------KPG--------MTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVF 177 (270)
Q Consensus 118 VIi~ag~~~------------~~g--------~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~ 177 (270)
||.+..++. +.| .-......+|++++.++++.|+++||++|+|++|||++ ++|+++
T Consensus 78 Vi~~irvGg~~~r~~De~Ip~kyGi~gqET~G~GG~~~alRtip~~~~i~~~i~~~~pda~lin~tNP~~----~vt~~~ 153 (437)
T cd05298 78 VFAQIRVGGYAMREQDEKIPLKHGVVGQETCGPGGFAYGLRSIGPMIELIDDIEKYSPDAWILNYSNPAA----IVAEAL 153 (437)
T ss_pred EEEEeeeCCchHHHHHHhHHHHcCcceecCccHHHHHHHHhhHHHHHHHHHHHHHHCCCeEEEEecCcHH----HHHHHH
Confidence 999865432 111 11234578999999999999999999999999999999 788888
Q ss_pred HHhCCCCCCCeeeechhhHHHHHHHHHHHhCCCCCccceEEEc-cCC
Q 024248 178 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG-GHA 223 (270)
Q Consensus 178 ~~~sg~p~~kviG~t~ldt~r~~~~lA~~l~v~~~~v~~~V~G-~hg 223 (270)
++. +|+.|++|+|+-.. .++..+|+.+|++++++...+.| ||.
T Consensus 154 ~~~--~~~~kviGlC~~~~-~~~~~la~~lg~~~~~v~~~~~GlNH~ 197 (437)
T cd05298 154 RRL--FPNARILNICDMPI-AIMDSMAAILGLDRKDLEPDYFGLNHF 197 (437)
T ss_pred HHH--CCCCCEEEECCcHH-HHHHHHHHHhCCCHHHceEEEEeecch
Confidence 876 78899999997664 47889999999999999999999 884
No 42
>PF02056 Glyco_hydro_4: Family 4 glycosyl hydrolase; InterPro: IPR001088 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 4 GH4 from CAZY comprises enzymes with several known activities; 6-phospho-beta-glucosidase (3.2.1.86 from EC); 6-phospho-alpha-glucosidase (3.2.1.122 from EC); alpha-galactosidase (3.2.1.22 from EC). 6-phospho-alpha-glucosidase requires both NAD(H) and divalent metal (Mn2+, Fe2+, Co2+, or Ni2+) for activity [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1U8X_X 1S6Y_A 3FEF_B 1VJT_A 1UP4_A 1UP6_C 1UP7_E 1OBB_A.
Probab=99.77 E-value=5.2e-18 Score=143.57 Aligned_cols=152 Identities=21% Similarity=0.252 Sum_probs=103.5
Q ss_pred eEEEEcCCCchHHHHH--HHHHh-CCC-ccEEEEEeCCCChh-----HHHHhhccccCcceeeeeccCCHHHHhCCCCEE
Q 024248 48 KVAVLGAAGGIGQPLA--MLMKI-NPL-VSVLHLYDVVNTPG-----VTADISHMDTNAVVRGFLGQQQLEDALTGMDIV 118 (270)
Q Consensus 48 KI~IIGa~G~VGs~la--~~l~~-~g~-~~eV~LvD~~~~~~-----~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvV 118 (270)
||+|||| |.+-.+.. ..+.. ..+ .+||+|+|+++++- .+..+... ....++ +..|+|+++|++|||+|
T Consensus 1 KI~iIGa-GS~~~~~~l~~~l~~~~~l~~~ei~L~Did~~RL~~~~~~~~~~~~~-~~~~~~-v~~ttd~~eAl~gADfV 77 (183)
T PF02056_consen 1 KITIIGA-GSTYFPLLLLGDLLRTEELSGSEIVLMDIDEERLEIVERLARRMVEE-AGADLK-VEATTDRREALEGADFV 77 (183)
T ss_dssp EEEEETT-TSCCHHHHHHHHHHCTTTSTEEEEEEE-SCHHHHHHHHHHHHHHHHH-CTTSSE-EEEESSHHHHHTTESEE
T ss_pred CEEEECC-chHhhHHHHHHHHhcCccCCCcEEEEEcCCHHHHHHHHHHHHHHHHh-cCCCeE-EEEeCCHHHHhCCCCEE
Confidence 8999998 76655532 22222 233 34999999997421 12222222 123333 45688999999999999
Q ss_pred EEcCCCC------------CCCCCc----------hhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHH
Q 024248 119 IIPAGVP------------RKPGMT----------RDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEV 176 (270)
Q Consensus 119 Ii~ag~~------------~~~g~~----------r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~ 176 (270)
|.+..+. .+.|.. ......++++.+.++++.++++||+||++|+|||+. +++++
T Consensus 78 i~~irvGg~~~r~~De~Ip~k~Gi~~~~~eT~G~GG~~~alRtipv~~~ia~~i~~~~PdAw~iNytNP~~----~vt~a 153 (183)
T PF02056_consen 78 INQIRVGGLEAREIDEEIPLKYGIVGTIQETVGPGGFFRALRTIPVMLDIARDIEELCPDAWLINYTNPMG----IVTEA 153 (183)
T ss_dssp EE---TTHHHHHHHHHHTGGCCTTT-BTTSSSTHHHHHHHHHHHHHHHHHHHHHHHHTTTSEEEE-SSSHH----HHHHH
T ss_pred EEEeeecchHHHHHHHHHHHHhCCccccccccCccHHHHHHhhHHHHHHHHHHHHHhCCCcEEEeccChHH----HHHHH
Confidence 9987543 222211 234567999999999999999999999999999998 78888
Q ss_pred HHHhCCCCCCCeeeechhhHHHHHHHHHHHhCC
Q 024248 177 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGL 209 (270)
Q Consensus 177 ~~~~sg~p~~kviG~t~ldt~r~~~~lA~~l~v 209 (270)
+.+. +|..|++|+|+... -+...+|+.+|+
T Consensus 154 ~~r~--~~~~k~vGlCh~~~-~~~~~la~~L~~ 183 (183)
T PF02056_consen 154 LSRY--TPKIKVVGLCHGPQ-GTRRQLAKLLGM 183 (183)
T ss_dssp HHHH--STTSEEEEE-SHHH-HHHHHHHHHHT-
T ss_pred HHHh--CCCCCEEEECCCHH-HHHHHHHHHhCc
Confidence 8876 46689999997754 578889998874
No 43
>COG1486 CelF Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases [Carbohydrate transport and metabolism]
Probab=99.76 E-value=1.1e-17 Score=157.14 Aligned_cols=169 Identities=25% Similarity=0.371 Sum_probs=122.8
Q ss_pred CCCeEEEEcCCCchHHHHHH--HHHh-CCC-ccEEEEEeCCCChhH-H----HHhhccccCcceeeeeccCCHHHHhCCC
Q 024248 45 PGFKVAVLGAAGGIGQPLAM--LMKI-NPL-VSVLHLYDVVNTPGV-T----ADISHMDTNAVVRGFLGQQQLEDALTGM 115 (270)
Q Consensus 45 ~~mKI~IIGa~G~VGs~la~--~l~~-~g~-~~eV~LvD~~~~~~~-~----~dl~~~~~~~~~~~i~~t~d~~~al~~A 115 (270)
+++||+|||| |.++..... .|.. ..+ ..||.|+|+++...+ . ..+.+. ....++ +..|+|.++|++||
T Consensus 2 ~~~KI~iIGg-GSt~tp~~v~g~l~~~e~l~~~el~L~Did~~r~~~i~~~~~~~v~~-~g~~~k-v~~ttd~~eAl~gA 78 (442)
T COG1486 2 KKFKIVIIGG-GSTYTPKLLLGDLARTEELPVRELALYDIDEERLKIIAILAKKLVEE-AGAPVK-VEATTDRREALEGA 78 (442)
T ss_pred CcceEEEECC-CccccHHHHHHHHhcCccCCcceEEEEeCCHHHHHHHHHHHHHHHHh-hCCCeE-EEEecCHHHHhcCC
Confidence 4679999998 766665321 2222 222 359999999874221 1 222222 123333 45688999999999
Q ss_pred CEEEEcCCCCC------------CCC---C-----chhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCCCcHHHHHH
Q 024248 116 DIVIIPAGVPR------------KPG---M-----TRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAE 175 (270)
Q Consensus 116 DvVIi~ag~~~------------~~g---~-----~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~ 175 (270)
|||+.++.++. +.| + .......++++++.+|++.|+++||+||++++|||+. ++|+
T Consensus 79 dfVi~~~rvG~l~~r~~De~IplkyG~~gqET~G~GGi~~glRtIpvildi~~~m~~~~P~Aw~lNytNP~~----~vTe 154 (442)
T COG1486 79 DFVITQIRVGGLEAREKDERIPLKHGLYGQETNGPGGIFYGLRTIPVILDIAKDMEKVCPNAWMLNYTNPAA----IVTE 154 (442)
T ss_pred CEEEEEEeeCCcccchhhhccchhhCccccccccccHHHhhcccchHHHHHHHHHHHhCCCceEEeccChHH----HHHH
Confidence 99999874432 111 1 1223456899999999999999999999999999998 7899
Q ss_pred HHHHhCCCCCCCeeeechhhHHHHHHHHHHHhCCCC-CccceEEEc-cCC
Q 024248 176 VFKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDP-REVDVPVVG-GHA 223 (270)
Q Consensus 176 ~~~~~sg~p~~kviG~t~ldt~r~~~~lA~~l~v~~-~~v~~~V~G-~hg 223 (270)
++.+. +|.-|++|+|+..- -....+|+.+|+++ .+++..+.| ||.
T Consensus 155 Av~r~--~~~~K~VGlCh~~~-g~~~~lAe~L~~~~~~~l~~~~aGlNH~ 201 (442)
T COG1486 155 AVRRL--YPKIKIVGLCHGPI-GIAMELAEVLGLEPREDLRYRVAGLNHM 201 (442)
T ss_pred HHHHh--CCCCcEEeeCCchH-HHHHHHHHHhCCCchhceeEEEeechhh
Confidence 98875 46449999997653 47889999999985 999999999 883
No 44
>PF02866 Ldh_1_C: lactate/malate dehydrogenase, alpha/beta C-terminal domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR022383 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the C-terminal, and is thought to be an is an unusual alpha+beta fold.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0055114 oxidation-reduction process; PDB: 4MDH_B 5MDH_A 1GV0_A 1GUZ_D 2EWD_B 2FRM_D 2FNZ_B 2FN7_B 2FM3_A 1LTH_T ....
Probab=99.61 E-value=1.1e-15 Score=129.00 Aligned_cols=74 Identities=36% Similarity=0.623 Sum_probs=66.7
Q ss_pred chhhHHHHHHHHHHHhCCCCCccceEEEccCCCCceeecccccc----CC-------CCCChhHHHHHHHHHHhhHHHHH
Q 024248 192 TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVK----PS-------CSLTPTEIDYLTDRIQNGGTEVV 260 (270)
Q Consensus 192 t~ldt~r~~~~lA~~l~v~~~~v~~~V~G~hg~~~~vp~~S~~~----p~-------~~~~~~~~~~i~~~v~~~~~~i~ 260 (270)
|.||++||++++|+++|++|.+++++||||||+ ++||+||+++ |+ ..++++++++|.++|+++|++|+
T Consensus 1 T~LDs~R~~~~la~~l~v~~~~v~~~ViGeHg~-s~~~~~S~~~v~g~pl~~~~~~~~~~~~~~~~~l~~~v~~~g~~ii 79 (174)
T PF02866_consen 1 TMLDSARFRYFLAEKLGVNPSSVNAYVIGEHGD-SQVPDWSHAKVGGVPLLSYAKPSGKLSEEELEELTERVRKAGYEII 79 (174)
T ss_dssp THHHHHHHHHHHHHHHTSGGGGEEEEEEBSSST-TEEEEGGGEEETTEEHHHHHHTTTSSSHHHHHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHCcCccceEEEEEecCCc-ceeeeeecccccccccccccccccchhHHhhhccccccEeccceee
Confidence 689999999999999999999999999999999 6899999997 43 23667788999999999999999
Q ss_pred hhcCCC
Q 024248 261 EVIRGN 266 (270)
Q Consensus 261 ~~k~~~ 266 (270)
++|+|+
T Consensus 80 ~~k~g~ 85 (174)
T PF02866_consen 80 KAKGGS 85 (174)
T ss_dssp HHHSSS
T ss_pred eecccc
Confidence 999654
No 45
>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=99.27 E-value=1.3e-10 Score=108.05 Aligned_cols=113 Identities=18% Similarity=0.237 Sum_probs=82.6
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhH-------------HHHhhccccCcceeeeeccCCHHHHhC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV-------------TADISHMDTNAVVRGFLGQQQLEDALT 113 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~-------------~~dl~~~~~~~~~~~i~~t~d~~~al~ 113 (270)
|||+|+|. |+||...+.+|++.|+ +|+++|+++.+-. ..+|..... .-.++..|+|+++|++
T Consensus 1 MkI~viGt-GYVGLv~g~~lA~~GH--eVv~vDid~~KV~~ln~g~~PI~EpgLe~ll~~~~--~~gRl~fTtd~~~a~~ 75 (414)
T COG1004 1 MKITVIGT-GYVGLVTGACLAELGH--EVVCVDIDESKVELLNKGISPIYEPGLEELLKENL--ASGRLRFTTDYEEAVK 75 (414)
T ss_pred CceEEECC-chHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHhCCCCCCcCccHHHHHHhcc--ccCcEEEEcCHHHHHh
Confidence 89999996 9999999999999999 9999999863211 122322211 1111456899999999
Q ss_pred CCCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCC-CEEEEe-cCCCCCcH
Q 024248 114 GMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPK-AIVNLI-SNPVNSTV 170 (270)
Q Consensus 114 ~ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~-a~viv~-sNPv~~~~ 170 (270)
++|++||+.|+|.++.. ..++..+...++.+.+..+. +++++= |-|+.+.-
T Consensus 76 ~adv~fIavgTP~~~dg------~aDl~~V~ava~~i~~~~~~~~vvV~KSTVPvGt~~ 128 (414)
T COG1004 76 DADVVFIAVGTPPDEDG------SADLSYVEAVAKDIGEILDGKAVVVIKSTVPVGTTE 128 (414)
T ss_pred cCCEEEEEcCCCCCCCC------CccHHHHHHHHHHHHhhcCCCeEEEEcCCCCCCchH
Confidence 99999999999987633 22467888889999888776 444443 56887643
No 46
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=99.12 E-value=1.3e-10 Score=98.65 Aligned_cols=120 Identities=25% Similarity=0.395 Sum_probs=78.8
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCCh-----hHHHH----hhcccc------CcceeeeeccCCHHHHh
Q 024248 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-----GVTAD----ISHMDT------NAVVRGFLGQQQLEDAL 112 (270)
Q Consensus 48 KI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~-----~~~~d----l~~~~~------~~~~~~i~~t~d~~~al 112 (270)
||+|+|+ |.+|..+|..++..|+ +|+++|.++.. ....+ +.+... ...+..+..++|++++.
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~~G~--~V~l~d~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~~~dl~~~~ 77 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFARAGY--EVTLYDRSPEALERARKRIERLLDRLVRKGRLSQEEADAALARISFTTDLEEAV 77 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTS--EEEEE-SSHHHHHHHHHHHHHHHHHHHHTTTTTHHHHHHHHHTEEEESSGGGGC
T ss_pred CEEEEcC-CHHHHHHHHHHHhCCC--cEEEEECChHHHHhhhhHHHHHHhhhhhhccchhhhhhhhhhhcccccCHHHHh
Confidence 7999998 9999999999999999 99999998631 11111 111100 11223355678996655
Q ss_pred CCCCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhC-CCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeeee
Q 024248 113 TGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV 191 (270)
Q Consensus 113 ~~ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG~ 191 (270)
+||+||.+. .++++..+++...+++.+ |++++ .||.+.. .++++.... . .++|++|+
T Consensus 78 -~adlViEai--------------~E~l~~K~~~~~~l~~~~~~~~il--asnTSsl---~i~~la~~~-~-~p~R~ig~ 135 (180)
T PF02737_consen 78 -DADLVIEAI--------------PEDLELKQELFAELDEICPPDTIL--ASNTSSL---SISELAAAL-S-RPERFIGM 135 (180)
T ss_dssp -TESEEEE-S---------------SSHHHHHHHHHHHHCCS-TTSEE--EE--SSS----HHHHHTTS-S-TGGGEEEE
T ss_pred -hhheehhhc--------------cccHHHHHHHHHHHHHHhCCCceE--EecCCCC---CHHHHHhcc-C-cCceEEEE
Confidence 999999986 345788999999999998 56765 8887775 355554433 2 45677777
Q ss_pred c
Q 024248 192 T 192 (270)
Q Consensus 192 t 192 (270)
.
T Consensus 136 H 136 (180)
T PF02737_consen 136 H 136 (180)
T ss_dssp E
T ss_pred e
Confidence 3
No 47
>COG1250 FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]
Probab=99.11 E-value=7.1e-10 Score=101.12 Aligned_cols=161 Identities=24% Similarity=0.321 Sum_probs=108.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC---hhH--HH----Hhhcc------ccCcceeeeeccCCHHHH
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGV--TA----DISHM------DTNAVVRGFLGQQQLEDA 111 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~---~~~--~~----dl~~~------~~~~~~~~i~~t~d~~~a 111 (270)
+||+|||| |.+|+.+|..++..|+ +|+++|++++ .+. .. .+... .....+..+..++++ .+
T Consensus 4 ~kv~ViGa-G~MG~gIA~~~A~~G~--~V~l~D~~~~~~~~~~~~i~~~l~k~~~~g~l~~~~~~~~l~~i~~~~~~-~~ 79 (307)
T COG1250 4 KKVAVIGA-GVMGAGIAAVFALAGY--DVVLKDISPEALERALAYIEKNLEKLVEKGKLTEEEADAALARITPTTDL-AA 79 (307)
T ss_pred cEEEEEcc-cchhHHHHHHHhhcCC--ceEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCChhhHHHHHhhccccCch-hH
Confidence 59999998 9999999999999778 9999999853 111 11 11111 011223335556777 48
Q ss_pred hCCCCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhC-CCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeee
Q 024248 112 LTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLG 190 (270)
Q Consensus 112 l~~ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG 190 (270)
+++||+||.++ .+|+++.+++.+.+.+++ |++++ .||.+.. .++++.... ..|+|++|
T Consensus 80 l~~~DlVIEAv--------------~E~levK~~vf~~l~~~~~~~aIl--ASNTSsl---~it~ia~~~--~rper~iG 138 (307)
T COG1250 80 LKDADLVIEAV--------------VEDLELKKQVFAELEALAKPDAIL--ASNTSSL---SITELAEAL--KRPERFIG 138 (307)
T ss_pred hccCCEEEEec--------------cccHHHHHHHHHHHHhhcCCCcEE--eeccCCC---CHHHHHHHh--CCchhEEE
Confidence 99999999985 567899999999999998 67766 9999887 355555443 34567777
Q ss_pred e-------------------chhhHHHHHHHHHHHhCCCCCcc-ce-EEEccCCCCceeecccccc
Q 024248 191 V-------------------TMLDVVRANTFVAEVLGLDPREV-DV-PVVGGHAGVTILPLLSQVK 235 (270)
Q Consensus 191 ~-------------------t~ldt~r~~~~lA~~l~v~~~~v-~~-~V~G~hg~~~~vp~~S~~~ 235 (270)
+ |.-++...-..+++.+|..|-.+ ++ -.++|+ -..|+|..+.
T Consensus 139 ~HFfNP~~~m~LVEvI~g~~T~~e~~~~~~~~~~~igK~~vv~~D~pGFi~NR---il~~~~~eA~ 201 (307)
T COG1250 139 LHFFNPVPLMPLVEVIRGEKTSDETVERVVEFAKKIGKTPVVVKDVPGFIVNR---LLAALLNEAI 201 (307)
T ss_pred EeccCCCCcceeEEEecCCCCCHHHHHHHHHHHHHcCCCCEeecCCCceehHh---HHHHHHHHHH
Confidence 6 33466667788889988544111 11 334454 2346666553
No 48
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=99.00 E-value=3.7e-09 Score=98.07 Aligned_cols=174 Identities=13% Similarity=-0.002 Sum_probs=107.2
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCCh--hHHHHhhc-c--ccCcceee----eeccCCHHHHhCCC
Q 024248 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISH-M--DTNAVVRG----FLGQQQLEDALTGM 115 (270)
Q Consensus 45 ~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~--~~~~dl~~-~--~~~~~~~~----i~~t~d~~~al~~A 115 (270)
+.|||.|+||+||+|++++..|+.+|+ +|+.+|+.... ....++.. . .....+.. +....++++.++++
T Consensus 14 ~~~~vlVtGatGfiG~~lv~~L~~~g~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~ 91 (348)
T PRK15181 14 APKRWLITGVAGFIGSGLLEELLFLNQ--TVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNV 91 (348)
T ss_pred cCCEEEEECCccHHHHHHHHHHHHCCC--EEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCC
Confidence 346999999999999999999999998 99999985421 01111110 0 00011111 11112345668899
Q ss_pred CEEEEcCCCCCCC--CCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCC-CCCcHHHHHHHHHHhCCCCCCCeeeec
Q 024248 116 DIVIIPAGVPRKP--GMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP-VNSTVPIAAEVFKKVGTYDPKRLLGVT 192 (270)
Q Consensus 116 DvVIi~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNP-v~~~~~i~t~~~~~~sg~p~~kviG~t 192 (270)
|+||++|+....+ ..+..++...|+....++++.+++.... .++++|.. +..... .....+..-..+...+|.+
T Consensus 92 d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~-~~v~~SS~~vyg~~~--~~~~~e~~~~~p~~~Y~~s 168 (348)
T PRK15181 92 DYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVS-SFTYAASSSTYGDHP--DLPKIEERIGRPLSPYAVT 168 (348)
T ss_pred CEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCC-eEEEeechHhhCCCC--CCCCCCCCCCCCCChhhHH
Confidence 9999998754321 1233456789999999999999886433 34444421 110000 0000011112234568888
Q ss_pred hhhHHHHHHHHHHHhCCCCCccc-eEEEccCC
Q 024248 193 MLDVVRANTFVAEVLGLDPREVD-VPVVGGHA 223 (270)
Q Consensus 193 ~ldt~r~~~~lA~~l~v~~~~v~-~~V~G~hg 223 (270)
++...++...+++..+++...++ +.|+|.+.
T Consensus 169 K~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~ 200 (348)
T PRK15181 169 KYVNELYADVFARSYEFNAIGLRYFNVFGRRQ 200 (348)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEecceeCcCC
Confidence 88887887778888899888885 59999763
No 49
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=98.99 E-value=6.3e-09 Score=99.80 Aligned_cols=174 Identities=14% Similarity=0.029 Sum_probs=107.4
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcC
Q 024248 43 GSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (270)
Q Consensus 43 ~~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~a 122 (270)
++++|||.|+||+||||++++..|+.+|+ +|+.+|+.... ....+.+......+..+ ..+-++.++.++|+||++|
T Consensus 117 ~~~~mkILVTGatGFIGs~Lv~~Ll~~G~--~V~~ldr~~~~-~~~~~~~~~~~~~~~~~-~~Di~~~~~~~~D~ViHlA 192 (436)
T PLN02166 117 GRKRLRIVVTGGAGFVGSHLVDKLIGRGD--EVIVIDNFFTG-RKENLVHLFGNPRFELI-RHDVVEPILLEVDQIYHLA 192 (436)
T ss_pred ccCCCEEEEECCccHHHHHHHHHHHHCCC--EEEEEeCCCCc-cHhHhhhhccCCceEEE-ECccccccccCCCEEEECc
Confidence 56679999999999999999999999998 99999985321 00111110001112111 1222334578999999999
Q ss_pred CCCC--CCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCC-CCCcH--HHHHHHHHHh-CCCCCCCeeeechhhH
Q 024248 123 GVPR--KPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP-VNSTV--PIAAEVFKKV-GTYDPKRLLGVTMLDV 196 (270)
Q Consensus 123 g~~~--~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNP-v~~~~--~i~t~~~~~~-sg~p~~kviG~t~ldt 196 (270)
+... ....+..+++..|+....++++.+++.. ..+|++|.- +.... ...++-.+.. .-..+...+|.++...
T Consensus 193 a~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g--~r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~a 270 (436)
T PLN02166 193 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG--ARFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTA 270 (436)
T ss_pred eeccchhhccCHHHHHHHHHHHHHHHHHHHHHhC--CEEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHHHHHH
Confidence 7432 1112345678899999999999999865 356655431 11100 0011100000 0112344578888888
Q ss_pred HHHHHHHHHHhCCCCCccc-eEEEccC
Q 024248 197 VRANTFVAEVLGLDPREVD-VPVVGGH 222 (270)
Q Consensus 197 ~r~~~~lA~~l~v~~~~v~-~~V~G~h 222 (270)
+++...+++..+++..-++ +.|+|.+
T Consensus 271 E~~~~~y~~~~~l~~~ilR~~~vYGp~ 297 (436)
T PLN02166 271 ETLAMDYHRGAGVEVRIARIFNTYGPR 297 (436)
T ss_pred HHHHHHHHHHhCCCeEEEEEccccCCC
Confidence 8888888888888877775 4789975
No 50
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=98.99 E-value=1.6e-09 Score=92.40 Aligned_cols=124 Identities=20% Similarity=0.276 Sum_probs=72.6
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhH-------------HHHhhcccc-CcceeeeeccCCHHHHh
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV-------------TADISHMDT-NAVVRGFLGQQQLEDAL 112 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~-------------~~dl~~~~~-~~~~~~i~~t~d~~~al 112 (270)
|||+|||. |+||..+|..|+..|+ +|+.+|+++..-. ..++..... ..+ +..++|+++++
T Consensus 1 M~I~ViGl-GyvGl~~A~~lA~~G~--~V~g~D~~~~~v~~l~~g~~p~~E~~l~~ll~~~~~~~~---l~~t~~~~~ai 74 (185)
T PF03721_consen 1 MKIAVIGL-GYVGLPLAAALAEKGH--QVIGVDIDEEKVEALNNGELPIYEPGLDELLKENVSAGR---LRATTDIEEAI 74 (185)
T ss_dssp -EEEEE---STTHHHHHHHHHHTTS--EEEEE-S-HHHHHHHHTTSSSS-CTTHHHHHHHHHHTTS---EEEESEHHHHH
T ss_pred CEEEEECC-CcchHHHHHHHHhCCC--EEEEEeCChHHHHHHhhccccccccchhhhhcccccccc---chhhhhhhhhh
Confidence 89999997 9999999999999999 9999999863110 011111100 122 34577898999
Q ss_pred CCCCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhC-CCCEEEEe-cCCCCCcHHHHHHHHHHhCC
Q 024248 113 TGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLI-SNPVNSTVPIAAEVFKKVGT 182 (270)
Q Consensus 113 ~~ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~-sNPv~~~~~i~t~~~~~~sg 182 (270)
++||++|++.++|.+.+.+ -++..+.+.++.|.+.. ++.+|++= |=|....-.++..++.+.++
T Consensus 75 ~~adv~~I~VpTP~~~~~~------~Dls~v~~a~~~i~~~l~~~~lvV~~STvppGtt~~~~~~ile~~~~ 140 (185)
T PF03721_consen 75 KDADVVFICVPTPSDEDGS------PDLSYVESAIESIAPVLRPGDLVVIESTVPPGTTEELLKPILEKRSG 140 (185)
T ss_dssp HH-SEEEE----EBETTTS------BETHHHHHHHHHHHHHHCSCEEEEESSSSSTTHHHHHHHHHHHHHCC
T ss_pred hccceEEEecCCCccccCC------ccHHHHHHHHHHHHHHHhhcceEEEccEEEEeeehHhhhhhhhhhcc
Confidence 9999999999988655321 23455566677776654 44554443 45666433345555565554
No 51
>PLN02650 dihydroflavonol-4-reductase
Probab=98.93 E-value=1.6e-08 Score=93.64 Aligned_cols=178 Identities=16% Similarity=0.051 Sum_probs=107.8
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh-HHHHhhcc-ccCcceee----eeccCCHHHHhCCCCE
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG-VTADISHM-DTNAVVRG----FLGQQQLEDALTGMDI 117 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~-~~~dl~~~-~~~~~~~~----i~~t~d~~~al~~ADv 117 (270)
+.+++|.|+||+||+|++++..|+..|+ +|++++++.... ...++... .....+.. +.....++++++++|+
T Consensus 3 ~~~k~iLVTGatGfIGs~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~ 80 (351)
T PLN02650 3 SQKETVCVTGASGFIGSWLVMRLLERGY--TVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTG 80 (351)
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHHHCCC--EEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCE
Confidence 4567999999999999999999999998 999888865321 11122110 00011111 2222346678889999
Q ss_pred EEEcCCCCCCCCCc-hhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCC-CCC----cHHHHHHHHH---Hh--CCCCCC
Q 024248 118 VIIPAGVPRKPGMT-RDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP-VNS----TVPIAAEVFK---KV--GTYDPK 186 (270)
Q Consensus 118 VIi~ag~~~~~g~~-r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNP-v~~----~~~i~t~~~~---~~--sg~p~~ 186 (270)
||++|+.......+ ..+.+..|+....++++.+.+...-..|+++|.. +.. ..+...+-.+ .. ...++.
T Consensus 81 ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~ 160 (351)
T PLN02650 81 VFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTG 160 (351)
T ss_pred EEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhcccccc
Confidence 99998753211112 2356788999999999999875422355555432 110 0000010000 00 000112
Q ss_pred CeeeechhhHHHHHHHHHHHhCCCCCccc-eEEEccCC
Q 024248 187 RLLGVTMLDVVRANTFVAEVLGLDPREVD-VPVVGGHA 223 (270)
Q Consensus 187 kviG~t~ldt~r~~~~lA~~l~v~~~~v~-~~V~G~hg 223 (270)
..+|.+++....+...+++.+|++...++ +.|+|+..
T Consensus 161 ~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~ 198 (351)
T PLN02650 161 WMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFI 198 (351)
T ss_pred chHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCC
Confidence 35777888788888888888899887775 58999753
No 52
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=98.93 E-value=9.4e-09 Score=92.65 Aligned_cols=164 Identities=16% Similarity=0.086 Sum_probs=111.1
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC-hhHHHHhhcccc-CcceeeeeccCCHHHHh--CCCCEEEEcC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDT-NAVVRGFLGQQQLEDAL--TGMDIVIIPA 122 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~-~~~~~dl~~~~~-~~~~~~i~~t~d~~~al--~~ADvVIi~a 122 (270)
|+|.|+|++|+|||+.+..|++.|+ +|+.+|.... .....+-..... ...+ ....-+.+.+ ...|.||+.|
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~--~vvV~DNL~~g~~~~v~~~~~~f~~gDi---~D~~~L~~vf~~~~idaViHFA 75 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGH--EVVVLDNLSNGHKIALLKLQFKFYEGDL---LDRALLTAVFEENKIDAVVHFA 75 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCC--eEEEEecCCCCCHHHhhhccCceEEecc---ccHHHHHHHHHhcCCCEEEECc
Confidence 7999999999999999999999999 9999998642 111111100000 0011 1011122333 3789999998
Q ss_pred CCCCCC--CCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEec-----CCCCCcHHHHHHHHHHhCCCCCCCeeeechhh
Q 024248 123 GVPRKP--GMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS-----NPVNSTVPIAAEVFKKVGTYDPKRLLGVTMLD 195 (270)
Q Consensus 123 g~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~s-----NPv~~~~~i~t~~~~~~sg~p~~kviG~t~ld 195 (270)
+...-. -+..+.|+..|+-....+++.+.+.+.+-+|.-.| +|... -++ +..-..+...+|-|+|-
T Consensus 76 a~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~---PI~----E~~~~~p~NPYG~sKlm 148 (329)
T COG1087 76 ASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTS---PIS----ETSPLAPINPYGRSKLM 148 (329)
T ss_pred cccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCc---ccC----CCCCCCCCCcchhHHHH
Confidence 754311 12367899999999999999999998766554322 23221 122 22223466789999999
Q ss_pred HHHHHHHHHHHhCCCCCcc-ceEEEccC
Q 024248 196 VVRANTFVAEVLGLDPREV-DVPVVGGH 222 (270)
Q Consensus 196 t~r~~~~lA~~l~v~~~~v-~~~V~G~h 222 (270)
.++..+.+++..+.+..-+ ++.+.|-|
T Consensus 149 ~E~iL~d~~~a~~~~~v~LRYFN~aGA~ 176 (329)
T COG1087 149 SEEILRDAAKANPFKVVILRYFNVAGAC 176 (329)
T ss_pred HHHHHHHHHHhCCCcEEEEEecccccCC
Confidence 9999999999999888777 67888855
No 53
>PLN02427 UDP-apiose/xylose synthase
Probab=98.91 E-value=1.3e-08 Score=95.47 Aligned_cols=176 Identities=15% Similarity=0.086 Sum_probs=103.8
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhC-CCccEEEEEeCCCChhH-HHHhhccccCcceee----eeccCCHHHHhCCCC
Q 024248 43 GSPGFKVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNTPGV-TADISHMDTNAVVRG----FLGQQQLEDALTGMD 116 (270)
Q Consensus 43 ~~~~mKI~IIGa~G~VGs~la~~l~~~-g~~~eV~LvD~~~~~~~-~~dl~~~~~~~~~~~----i~~t~d~~~al~~AD 116 (270)
..++|||.|+||+||+|++++..|+.+ ++ +|+++|+...... ............+.. +....+++++++++|
T Consensus 11 ~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~--~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d 88 (386)
T PLN02427 11 PIKPLTICMIGAGGFIGSHLCEKLMTETPH--KVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMAD 88 (386)
T ss_pred cccCcEEEEECCcchHHHHHHHHHHhcCCC--EEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCC
Confidence 366789999999999999999999987 57 9999997643211 111100000011111 111234567788999
Q ss_pred EEEEcCCCCCCC--CCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCC-CCCc---------HHHHH--H--HHHH-
Q 024248 117 IVIIPAGVPRKP--GMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP-VNST---------VPIAA--E--VFKK- 179 (270)
Q Consensus 117 vVIi~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNP-v~~~---------~~i~t--~--~~~~- 179 (270)
+||++|+..... .....+.+..|+....++++.+++.. ..++++|.. +... .++-. . ....
T Consensus 89 ~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~--~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~ 166 (386)
T PLN02427 89 LTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKED 166 (386)
T ss_pred EEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC--CEEEEEeeeeeeCCCcCCCCCccccccccccccccccc
Confidence 999999753211 11223456778888889999887754 355555531 1100 00000 0 0000
Q ss_pred hCC--C----CCCCeeeechhhHHHHHHHHHHHhCCCCCccc-eEEEccC
Q 024248 180 VGT--Y----DPKRLLGVTMLDVVRANTFVAEVLGLDPREVD-VPVVGGH 222 (270)
Q Consensus 180 ~sg--~----p~~kviG~t~ldt~r~~~~lA~~l~v~~~~v~-~~V~G~h 222 (270)
.+- + .+...+|.++....++...+++..+++..-++ +.|+|.+
T Consensus 167 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~ 216 (386)
T PLN02427 167 ESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPR 216 (386)
T ss_pred ccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCC
Confidence 000 0 01235777777777777777888898887775 5899975
No 54
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.90 E-value=1.9e-08 Score=92.76 Aligned_cols=145 Identities=17% Similarity=0.179 Sum_probs=94.1
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh-H-------HH-Hhhcccc--CcceeeeeccCCHHHHhCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG-V-------TA-DISHMDT--NAVVRGFLGQQQLEDALTGM 115 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~-~-------~~-dl~~~~~--~~~~~~i~~t~d~~~al~~A 115 (270)
.||+|||+ |.+|+.+|..++..|+ +|+++|+++... . .. .+..... ......+..++++++++++|
T Consensus 8 ~~VaVIGa-G~MG~giA~~~a~aG~--~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~a 84 (321)
T PRK07066 8 KTFAAIGS-GVIGSGWVARALAHGL--DVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADA 84 (321)
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCC
Confidence 48999998 9999999999999999 999999986311 0 01 1111100 01111234466898999999
Q ss_pred CEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeeee----
Q 024248 116 DIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV---- 191 (270)
Q Consensus 116 DvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG~---- 191 (270)
|+|+.++ .+|.++.+++...+.+.+|... |+.||.+... ++++.... . .++|++|+
T Consensus 85 DlViEav--------------pE~l~vK~~lf~~l~~~~~~~a-IlaSnTS~l~---~s~la~~~-~-~p~R~~g~Hffn 144 (321)
T PRK07066 85 DFIQESA--------------PEREALKLELHERISRAAKPDA-IIASSTSGLL---PTDFYARA-T-HPERCVVGHPFN 144 (321)
T ss_pred CEEEECC--------------cCCHHHHHHHHHHHHHhCCCCe-EEEECCCccC---HHHHHHhc-C-CcccEEEEecCC
Confidence 9999985 3457788889999999886433 4588888642 44443322 2 34556553
Q ss_pred ---------------chhhHHHHHHHHHHHhCCCCCcc
Q 024248 192 ---------------TMLDVVRANTFVAEVLGLDPREV 214 (270)
Q Consensus 192 ---------------t~ldt~r~~~~lA~~l~v~~~~v 214 (270)
|.-++...-..+.+.+|..|-.+
T Consensus 145 P~~~~pLVEVv~g~~T~~e~~~~~~~f~~~lGk~pV~v 182 (321)
T PRK07066 145 PVYLLPLVEVLGGERTAPEAVDAAMGIYRALGMRPLHV 182 (321)
T ss_pred ccccCceEEEeCCCCCCHHHHHHHHHHHHHcCCEeEec
Confidence 33444444455667788766444
No 55
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=98.90 E-value=2e-08 Score=94.19 Aligned_cols=175 Identities=14% Similarity=0.093 Sum_probs=104.4
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
..+|||+|+|++||||++++..|...|+ +|+.+|+.... ...+..... ......+.....+.++++++|+||++|+
T Consensus 19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~--~V~~v~r~~~~-~~~~~~~~~-~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa 94 (370)
T PLN02695 19 SEKLRICITGAGGFIASHIARRLKAEGH--YIIASDWKKNE-HMSEDMFCH-EFHLVDLRVMENCLKVTKGVDHVFNLAA 94 (370)
T ss_pred CCCCEEEEECCccHHHHHHHHHHHhCCC--EEEEEEecccc-ccccccccc-eEEECCCCCHHHHHHHHhCCCEEEEccc
Confidence 4568999999999999999999999999 99999985321 000000000 0000001111234456789999999986
Q ss_pred CCCCCC---CchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCC-CCCcHHHHHH--HHHHhC--CCCCCCeeeechhh
Q 024248 124 VPRKPG---MTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP-VNSTVPIAAE--VFKKVG--TYDPKRLLGVTMLD 195 (270)
Q Consensus 124 ~~~~~g---~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNP-v~~~~~i~t~--~~~~~s--g~p~~kviG~t~ld 195 (270)
.....+ ......+..|+....++++.+++...+ .++++|.. +......... -+.+.. .+.+...+|.++..
T Consensus 95 ~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk-~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~~ 173 (370)
T PLN02695 95 DMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVK-RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLA 173 (370)
T ss_pred ccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCC-EEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHHHHH
Confidence 431111 112234578999999999999876544 44445432 2110000000 000100 12344567778888
Q ss_pred HHHHHHHHHHHhCCCCCccce-EEEccCC
Q 024248 196 VVRANTFVAEVLGLDPREVDV-PVVGGHA 223 (270)
Q Consensus 196 t~r~~~~lA~~l~v~~~~v~~-~V~G~hg 223 (270)
+.++...+++..|++...++. .++|.++
T Consensus 174 ~E~~~~~~~~~~g~~~~ilR~~~vyGp~~ 202 (370)
T PLN02695 174 TEELCKHYTKDFGIECRIGRFHNIYGPFG 202 (370)
T ss_pred HHHHHHHHHHHhCCCEEEEEECCccCCCC
Confidence 888777788888998877754 8999764
No 56
>PLN00198 anthocyanidin reductase; Provisional
Probab=98.89 E-value=7.2e-08 Score=88.69 Aligned_cols=176 Identities=15% Similarity=0.051 Sum_probs=106.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCCh-hHHHHhhccccCcceee----eeccCCHHHHhCCCCEEE
Q 024248 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTNAVVRG----FLGQQQLEDALTGMDIVI 119 (270)
Q Consensus 45 ~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~-~~~~dl~~~~~~~~~~~----i~~t~d~~~al~~ADvVI 119 (270)
+.+||.|+||+||+|++++..|+++|+ +|++++++... ....++........+.. +....++.++++++|+||
T Consensus 8 ~~~~vlItG~~GfIG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi 85 (338)
T PLN00198 8 GKKTACVIGGTGFLASLLIKLLLQKGY--AVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVF 85 (338)
T ss_pred CCCeEEEECCchHHHHHHHHHHHHCCC--EEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEE
Confidence 356899999999999999999999998 89888776431 11111111000011111 112223566788999999
Q ss_pred EcCCCCCCCCCc-hhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCC-CCCc------HHHHHHHHH-----HhCCCCCC
Q 024248 120 IPAGVPRKPGMT-RDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP-VNST------VPIAAEVFK-----KVGTYDPK 186 (270)
Q Consensus 120 i~ag~~~~~g~~-r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNP-v~~~------~~i~t~~~~-----~~sg~p~~ 186 (270)
++|+.......+ ..+++..|+.....+++.+.+......++++|.- +... ...+.+-.+ .....++.
T Consensus 86 h~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~ 165 (338)
T PLN00198 86 HVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPT 165 (338)
T ss_pred EeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCcc
Confidence 999743211112 2345688999999999999876422345544432 1100 000111000 00012344
Q ss_pred CeeeechhhHHHHHHHHHHHhCCCCCccc-eEEEccC
Q 024248 187 RLLGVTMLDVVRANTFVAEVLGLDPREVD-VPVVGGH 222 (270)
Q Consensus 187 kviG~t~ldt~r~~~~lA~~l~v~~~~v~-~~V~G~h 222 (270)
..+|.++....++...+++.+|++...++ +.|+|++
T Consensus 166 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~ 202 (338)
T PLN00198 166 WGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPS 202 (338)
T ss_pred chhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCC
Confidence 55788888788888888888899887775 4899976
No 57
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=98.89 E-value=2.8e-08 Score=91.08 Aligned_cols=168 Identities=17% Similarity=0.078 Sum_probs=107.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh----HHHHhhccccCcc--eeeeeccCCHHHHhCCCCEE
Q 024248 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG----VTADISHMDTNAV--VRGFLGQQQLEDALTGMDIV 118 (270)
Q Consensus 45 ~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~----~~~dl~~~~~~~~--~~~i~~t~d~~~al~~ADvV 118 (270)
..++|+|+||+||||++++..|+++|+ +|+.-=+++... ...+|........ ...+...+.+.+|+++||.|
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY--~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgV 82 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGY--TVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGV 82 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCC--EEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEE
Confidence 457999999999999999999999999 888877776421 2334443221111 11233455688999999999
Q ss_pred EEcCCCCCCCCC-chhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCe---------
Q 024248 119 IIPAGVPRKPGM-TRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRL--------- 188 (270)
Q Consensus 119 Ii~ag~~~~~g~-~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kv--------- 188 (270)
|++|....-... ...+++.-+++++.++++.+++.. ...=+|+|+.... +.......+++.+
T Consensus 83 fH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~-sVkrvV~TSS~aA-------v~~~~~~~~~~~vvdE~~wsd~ 154 (327)
T KOG1502|consen 83 FHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTK-SVKRVVYTSSTAA-------VRYNGPNIGENSVVDEESWSDL 154 (327)
T ss_pred EEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccC-CcceEEEeccHHH-------hccCCcCCCCCcccccccCCcH
Confidence 999865422122 234678889999999999999876 4433445543321 1111000111111
Q ss_pred ---------eeechhhHHHHHHHHHHHhCCCCCccc-eEEEccC
Q 024248 189 ---------LGVTMLDVVRANTFVAEVLGLDPREVD-VPVVGGH 222 (270)
Q Consensus 189 ---------iG~t~ldt~r~~~~lA~~l~v~~~~v~-~~V~G~h 222 (270)
+.+++.=+.+....+|++-+++...++ +.|+|.-
T Consensus 155 ~~~~~~~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~ 198 (327)
T KOG1502|consen 155 DFCRCKKLWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPG 198 (327)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCC
Confidence 333333356777888888888888776 4888853
No 58
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=98.87 E-value=1.3e-08 Score=92.09 Aligned_cols=107 Identities=19% Similarity=0.279 Sum_probs=74.5
Q ss_pred EEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccC-cceeeeeccCCHHHHhCCCCEEEEcCCCCCCC
Q 024248 50 AVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTN-AVVRGFLGQQQLEDALTGMDIVIIPAGVPRKP 128 (270)
Q Consensus 50 ~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~-~~~~~i~~t~d~~~al~~ADvVIi~ag~~~~~ 128 (270)
.|+||+||+|++++..|+++|...+|..+|+........++...... .....+....+++++++++|+||++|+.....
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~~~ 80 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVPPW 80 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCcccccc
Confidence 48999999999999999999954599999987642221122211110 01111333456888999999999998754333
Q ss_pred C-CchhhhHHhhHHHHHHHHHHHhHhCCC
Q 024248 129 G-MTRDDLFNINAGIVKTLCEGIAKCCPK 156 (270)
Q Consensus 129 g-~~r~~~~~~N~~i~~~i~~~i~~~~p~ 156 (270)
+ .....+...|+...+++++.+.+..-+
T Consensus 81 ~~~~~~~~~~vNV~GT~nvl~aa~~~~Vk 109 (280)
T PF01073_consen 81 GDYPPEEYYKVNVDGTRNVLEAARKAGVK 109 (280)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 3 345668899999999999999976433
No 59
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=98.85 E-value=3.3e-08 Score=99.38 Aligned_cols=169 Identities=13% Similarity=0.015 Sum_probs=105.1
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhC-CCccEEEEEeCCCChhHHHHhhccccCcceee----eeccCC-HHHHhCCCCEE
Q 024248 45 PGFKVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNTPGVTADISHMDTNAVVRG----FLGQQQ-LEDALTGMDIV 118 (270)
Q Consensus 45 ~~mKI~IIGa~G~VGs~la~~l~~~-g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~----i~~t~d-~~~al~~ADvV 118 (270)
+.|||.|+||+||+|++++..|+.. |+ +|+.+|+..... .++... ..+.. +....+ ++++++++|+|
T Consensus 314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~--~V~~l~r~~~~~--~~~~~~---~~~~~~~gDl~d~~~~l~~~l~~~D~V 386 (660)
T PRK08125 314 RRTRVLILGVNGFIGNHLTERLLRDDNY--EVYGLDIGSDAI--SRFLGH---PRFHFVEGDISIHSEWIEYHIKKCDVV 386 (660)
T ss_pred cCCEEEEECCCchHHHHHHHHHHhCCCc--EEEEEeCCchhh--hhhcCC---CceEEEeccccCcHHHHHHHhcCCCEE
Confidence 3468999999999999999999875 78 999999865311 111111 11111 111111 34578899999
Q ss_pred EEcCCCCCC--CCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecC-CCCCcH--HHHHHHHHHhCCCC---CCCeee
Q 024248 119 IIPAGVPRK--PGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISN-PVNSTV--PIAAEVFKKVGTYD---PKRLLG 190 (270)
Q Consensus 119 Ii~ag~~~~--~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sN-Pv~~~~--~i~t~~~~~~sg~p---~~kviG 190 (270)
|++|+.... ......+++..|+....++++.++++. ..++++|. .+.... ..+.+-.......| +...+|
T Consensus 387 iHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~--~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg 464 (660)
T PRK08125 387 LPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN--KRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYS 464 (660)
T ss_pred EECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC--CeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchH
Confidence 999875421 112344567889999999999999875 34554543 222100 00111000000001 224688
Q ss_pred echhhHHHHHHHHHHHhCCCCCccce-EEEccC
Q 024248 191 VTMLDVVRANTFVAEVLGLDPREVDV-PVVGGH 222 (270)
Q Consensus 191 ~t~ldt~r~~~~lA~~l~v~~~~v~~-~V~G~h 222 (270)
.++..+.++...+++..|++...++. .|+|++
T Consensus 465 ~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~ 497 (660)
T PRK08125 465 VSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPR 497 (660)
T ss_pred HHHHHHHHHHHHHHHhcCCceEEEEEceeeCCC
Confidence 88888888888888999998888864 789975
No 60
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=98.85 E-value=1.4e-09 Score=98.50 Aligned_cols=167 Identities=18% Similarity=0.202 Sum_probs=99.2
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCCh--hHHHHhhccccCccee--------eeeccCCHHHHhC--CCC
Q 024248 49 VAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTNAVVR--------GFLGQQQLEDALT--GMD 116 (270)
Q Consensus 49 I~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~--~~~~dl~~~~~~~~~~--------~i~~t~d~~~al~--~AD 116 (270)
|.|+||+|.+|+.++..|+..+. .+|+++|+++.. ....++........++ .+.....+..+++ +.|
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p-~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pd 79 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGP-KKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPD 79 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB--SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-S
T ss_pred CEEEccccHHHHHHHHHHHhcCC-CeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCC
Confidence 68999999999999999998865 499999998632 2223442110111111 1111222456677 999
Q ss_pred EEEEcCCCCCCC--CCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeeeechh
Q 024248 117 IVIIPAGVPRKP--GMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGVTML 194 (270)
Q Consensus 117 vVIi~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG~t~l 194 (270)
+||++|....-+ .....+.+..|+-..+++++...++..+.+|.+.|.-+ ..|..++|.|+.
T Consensus 80 iVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKA----------------v~PtnvmGatKr 143 (293)
T PF02719_consen 80 IVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKA----------------VNPTNVMGATKR 143 (293)
T ss_dssp EEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGC----------------SS--SHHHHHHH
T ss_pred EEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccccc----------------CCCCcHHHHHHH
Confidence 999998753211 12345678999999999999999988777777766321 123455667655
Q ss_pred hHHHHHHHHHHHh---CCCCCcc-ceEEEccCCCCceeeccccc
Q 024248 195 DVVRANTFVAEVL---GLDPREV-DVPVVGGHAGVTILPLLSQV 234 (270)
Q Consensus 195 dt~r~~~~lA~~l---~v~~~~v-~~~V~G~hg~~~~vp~~S~~ 234 (270)
-+.++....+... +.....| .+.|+|..| +.+|+|-+-
T Consensus 144 laE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~G--SVip~F~~Q 185 (293)
T PF02719_consen 144 LAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRG--SVIPLFKKQ 185 (293)
T ss_dssp HHHHHHHHHCCTSSSS--EEEEEEE-EETTGTT--SCHHHHHHH
T ss_pred HHHHHHHHHhhhCCCCCcEEEEEEecceecCCC--cHHHHHHHH
Confidence 5555555554444 2333445 469999987 488998743
No 61
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.84 E-value=3.8e-08 Score=88.63 Aligned_cols=169 Identities=18% Similarity=0.111 Sum_probs=104.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCC-CEEEEcCCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGM-DIVIIPAGVP 125 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~A-DvVIi~ag~~ 125 (270)
|+|.|+|++||||++++..|++.|+ +|+.+|+......... .... .... .+.......+.++++ |.||++++..
T Consensus 1 ~~ILVtG~tGfiG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~-~~~~-~~~~-d~~~~~~~~~~~~~~~d~vih~aa~~ 75 (314)
T COG0451 1 MRILVTGGAGFIGSHLVERLLAAGH--DVRGLDRLRDGLDPLL-SGVE-FVVL-DLTDRDLVDELAKGVPDAVIHLAAQS 75 (314)
T ss_pred CeEEEEcCcccHHHHHHHHHHhCCC--eEEEEeCCCccccccc-cccc-eeee-cccchHHHHHHHhcCCCEEEEccccC
Confidence 4699999999999999999999999 9999998653221111 0000 0000 001112344556677 9999998765
Q ss_pred CCCCCch---hhhHHhhHHHHHHHHHHHhHhCCCCEEEEecC-CCCCcH---HHHHHHHHHhCCCCCCCeeeechhhHHH
Q 024248 126 RKPGMTR---DDLFNINAGIVKTLCEGIAKCCPKAIVNLISN-PVNSTV---PIAAEVFKKVGTYDPKRLLGVTMLDVVR 198 (270)
Q Consensus 126 ~~~g~~r---~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sN-Pv~~~~---~i~t~~~~~~sg~p~~kviG~t~ldt~r 198 (270)
..++..+ .++...|+...+++++.+++ +.-..++..|. .+.... +.+++-. ....|.. .+|.+++..++
T Consensus 76 ~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~-~~~~~~v~~ss~~~~~~~~~~~~~~E~~--~~~~p~~-~Yg~sK~~~E~ 151 (314)
T COG0451 76 SVPDSNASDPAEFLDVNVDGTLNLLEAARA-AGVKRFVFASSVSVVYGDPPPLPIDEDL--GPPRPLN-PYGVSKLAAEQ 151 (314)
T ss_pred chhhhhhhCHHHHHHHHHHHHHHHHHHHHH-cCCCeEEEeCCCceECCCCCCCCccccc--CCCCCCC-HHHHHHHHHHH
Confidence 4333322 24788999999999999998 33334444332 111100 0111110 1112222 57888888888
Q ss_pred HHHHHHHHhCCCCCccce-EEEccCCC
Q 024248 199 ANTFVAEVLGLDPREVDV-PVVGGHAG 224 (270)
Q Consensus 199 ~~~~lA~~l~v~~~~v~~-~V~G~hg~ 224 (270)
.....++..+++...++. .|+|.+..
T Consensus 152 ~~~~~~~~~~~~~~ilR~~~vyGp~~~ 178 (314)
T COG0451 152 LLRAYARLYGLPVVILRPFNVYGPGDK 178 (314)
T ss_pred HHHHHHHHhCCCeEEEeeeeeeCCCCC
Confidence 888888888899888874 89997644
No 62
>PLN02206 UDP-glucuronate decarboxylase
Probab=98.83 E-value=5.8e-08 Score=93.33 Aligned_cols=174 Identities=14% Similarity=0.024 Sum_probs=104.3
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcC
Q 024248 43 GSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (270)
Q Consensus 43 ~~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~a 122 (270)
+.+.|||.|+||+||||++++..|+++|+ +|+.+|+..... ...+.+......+..+. .+-.+.++.++|+||++|
T Consensus 116 ~~~~~kILVTGatGfIGs~Lv~~Ll~~G~--~V~~ld~~~~~~-~~~~~~~~~~~~~~~i~-~D~~~~~l~~~D~ViHlA 191 (442)
T PLN02206 116 KRKGLRVVVTGGAGFVGSHLVDRLMARGD--SVIVVDNFFTGR-KENVMHHFSNPNFELIR-HDVVEPILLEVDQIYHLA 191 (442)
T ss_pred ccCCCEEEEECcccHHHHHHHHHHHHCcC--EEEEEeCCCccc-hhhhhhhccCCceEEEE-CCccChhhcCCCEEEEee
Confidence 35669999999999999999999999998 999998753210 01111000011122111 112334577899999999
Q ss_pred CCCCC--CCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCC-CCCcH--HHHHHHHHHh-CCCCCCCeeeechhhH
Q 024248 123 GVPRK--PGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP-VNSTV--PIAAEVFKKV-GTYDPKRLLGVTMLDV 196 (270)
Q Consensus 123 g~~~~--~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNP-v~~~~--~i~t~~~~~~-sg~p~~kviG~t~ldt 196 (270)
+.... ...+..+++..|+....++++.+++.. ..+|++|.- +.... ....+-.+.. .-..+...++.++..+
T Consensus 192 a~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g--~r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~a 269 (442)
T PLN02206 192 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG--ARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTA 269 (442)
T ss_pred eecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhC--CEEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHHHHH
Confidence 75321 112345677899999999999998764 356655532 11000 0001100000 0011134577777777
Q ss_pred HHHHHHHHHHhCCCCCccc-eEEEccC
Q 024248 197 VRANTFVAEVLGLDPREVD-VPVVGGH 222 (270)
Q Consensus 197 ~r~~~~lA~~l~v~~~~v~-~~V~G~h 222 (270)
.++...+.+..+++..-++ ..++|.+
T Consensus 270 E~~~~~y~~~~g~~~~ilR~~~vyGp~ 296 (442)
T PLN02206 270 ETLTMDYHRGANVEVRIARIFNTYGPR 296 (442)
T ss_pred HHHHHHHHHHhCCCeEEEEeccccCCC
Confidence 7777777788888777765 3788865
No 63
>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.
Probab=98.81 E-value=1.5e-08 Score=102.52 Aligned_cols=143 Identities=20% Similarity=0.245 Sum_probs=97.6
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC---hh--HHHHh----h-ccc-----cCcceeeeeccCCHHHH
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PG--VTADI----S-HMD-----TNAVVRGFLGQQQLEDA 111 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~---~~--~~~dl----~-~~~-----~~~~~~~i~~t~d~~~a 111 (270)
.||+|||| |.+|..+|..++..|+ +|+|+|++++ .+ .+.+. . ... ....+..+..++|+ ++
T Consensus 314 ~~v~ViGa-G~mG~gIA~~~a~~G~--~V~l~d~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 389 (714)
T TIGR02437 314 KQAAVLGA-GIMGGGIAYQSASKGT--PIVMKDINQHSLDLGLTEAAKLLNKQVERGRITPAKMAGVLNGITPTLSY-AG 389 (714)
T ss_pred ceEEEECC-chHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeEEeCCH-HH
Confidence 48999998 9999999999999999 9999999863 11 11111 1 100 01112235567788 67
Q ss_pred hCCCCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCC-CCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeee
Q 024248 112 LTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCP-KAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLG 190 (270)
Q Consensus 112 l~~ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG 190 (270)
+++||+||.++ .+++++.+++...+.+.++ ++++ .||.+... ++++.... . .|+|++|
T Consensus 390 ~~~aDlViEav--------------~E~l~~K~~vf~~l~~~~~~~~il--asnTS~l~---i~~ia~~~-~-~p~r~ig 448 (714)
T TIGR02437 390 FDNVDIVVEAV--------------VENPKVKAAVLAEVEQHVREDAIL--ASNTSTIS---ISLLAKAL-K-RPENFCG 448 (714)
T ss_pred hcCCCEEEEcC--------------cccHHHHHHHHHHHHhhCCCCcEE--EECCCCCC---HHHHHhhc-C-CcccEEE
Confidence 99999999985 4568899999999999985 6654 89988863 55554433 2 3567777
Q ss_pred e-------------------chhhHHHHHHHHHHHhCCCCCcc
Q 024248 191 V-------------------TMLDVVRANTFVAEVLGLDPREV 214 (270)
Q Consensus 191 ~-------------------t~ldt~r~~~~lA~~l~v~~~~v 214 (270)
+ |.-++......+++.+|..|--+
T Consensus 449 ~Hff~P~~~~~lvEvv~g~~Ts~~~~~~~~~~~~~lgk~pv~v 491 (714)
T TIGR02437 449 MHFFNPVHRMPLVEVIRGEKSSDETIATVVAYASKMGKTPIVV 491 (714)
T ss_pred EecCCCcccCceEeecCCCCCCHHHHHHHHHHHHHcCCEEEEe
Confidence 6 22344444566667777766544
No 64
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=98.81 E-value=5.4e-08 Score=89.51 Aligned_cols=168 Identities=17% Similarity=0.177 Sum_probs=102.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhH--HHHhhccccCccee-eeeccCCHHHHhCCCCEEEEcC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV--TADISHMDTNAVVR-GFLGQQQLEDALTGMDIVIIPA 122 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~--~~dl~~~~~~~~~~-~i~~t~d~~~al~~ADvVIi~a 122 (270)
.++|.|+||+|++|++++..|+..|...+|+++|++..... ..++... ....+. .+....+++++++++|+||++|
T Consensus 4 ~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~-~~~~v~~Dl~d~~~l~~~~~~iD~Vih~A 82 (324)
T TIGR03589 4 NKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAP-CLRFFIGDVRDKERLTRALRGVDYVVHAA 82 (324)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCC-cEEEEEccCCCHHHHHHHHhcCCEEEECc
Confidence 46899999999999999999988762238999998653211 1111110 000000 1122224566788999999999
Q ss_pred CCCCCC--CCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeeeechhhHHHHH
Q 024248 123 GVPRKP--GMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGVTMLDVVRAN 200 (270)
Q Consensus 123 g~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG~t~ldt~r~~ 200 (270)
|....+ ..+..+.+..|+.....+++.+.+.... .|+++|.... +.+...+|.++....++.
T Consensus 83 g~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~-~iV~~SS~~~---------------~~p~~~Y~~sK~~~E~l~ 146 (324)
T TIGR03589 83 ALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVK-RVVALSTDKA---------------ANPINLYGATKLASDKLF 146 (324)
T ss_pred ccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEeCCCC---------------CCCCCHHHHHHHHHHHHH
Confidence 864221 1233467889999999999999875433 4555553111 122344666666666655
Q ss_pred HHHH---HHhCCCCCccc-eEEEccCCCCceeeccc
Q 024248 201 TFVA---EVLGLDPREVD-VPVVGGHAGVTILPLLS 232 (270)
Q Consensus 201 ~~lA---~~l~v~~~~v~-~~V~G~hg~~~~vp~~S 232 (270)
..++ ...|++...++ +.|+|..+ .++|.+.
T Consensus 147 ~~~~~~~~~~gi~~~~lR~g~v~G~~~--~~i~~~~ 180 (324)
T TIGR03589 147 VAANNISGSKGTRFSVVRYGNVVGSRG--SVVPFFK 180 (324)
T ss_pred HHHHhhccccCcEEEEEeecceeCCCC--CcHHHHH
Confidence 4443 34577766664 58888754 2455544
No 65
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=98.81 E-value=1.5e-07 Score=87.05 Aligned_cols=174 Identities=14% Similarity=0.035 Sum_probs=102.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhH-HH-HhhccccCccee-eeeccCCHHHHhCC--CCEEEE
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV-TA-DISHMDTNAVVR-GFLGQQQLEDALTG--MDIVII 120 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~-~~-dl~~~~~~~~~~-~i~~t~d~~~al~~--ADvVIi 120 (270)
.|+|.|+||+|++|++++..|++.|+ +|+.+|++..... .. .+........+. .+....++.+.+++ .|+||+
T Consensus 4 ~k~ilItGatG~IG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih 81 (349)
T TIGR02622 4 GKKVLVTGHTGFKGSWLSLWLLELGA--EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFH 81 (349)
T ss_pred CCEEEEECCCChhHHHHHHHHHHCCC--EEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEE
Confidence 46899999999999999999999998 9999998754211 11 111100000010 11112234455654 599999
Q ss_pred cCCCCCCC--CCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCC-CCCcHHHHHHHHHHhCCCCCCCeeeechhhHH
Q 024248 121 PAGVPRKP--GMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP-VNSTVPIAAEVFKKVGTYDPKRLLGVTMLDVV 197 (270)
Q Consensus 121 ~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNP-v~~~~~i~t~~~~~~sg~p~~kviG~t~ldt~ 197 (270)
+++.+... ..+....+..|+.....+++.+.+.+....++++|.. ++....- ..-+.+....++...+|.++....
T Consensus 82 ~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~-~~~~~e~~~~~p~~~Y~~sK~~~e 160 (349)
T TIGR02622 82 LAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEW-VWGYRETDPLGGHDPYSSSKACAE 160 (349)
T ss_pred CCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCC-CCCCccCCCCCCCCcchhHHHHHH
Confidence 99753211 1123456788999999999998865423456655542 2110000 000011112234456788777777
Q ss_pred HHHHHHHHHh-------CCCCCccc-eEEEccC
Q 024248 198 RANTFVAEVL-------GLDPREVD-VPVVGGH 222 (270)
Q Consensus 198 r~~~~lA~~l-------~v~~~~v~-~~V~G~h 222 (270)
++...+++.+ +++...++ +.|+|+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~ 193 (349)
T TIGR02622 161 LVIASYRSSFFGVANFHGIKIASARAGNVIGGG 193 (349)
T ss_pred HHHHHHHHHhhcccccCCCcEEEEccCcccCCC
Confidence 7777777765 66666664 5888864
No 66
>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=98.81 E-value=4.4e-08 Score=99.26 Aligned_cols=143 Identities=19% Similarity=0.302 Sum_probs=96.8
Q ss_pred CeEEEEcCCCchHHHHHHHHH-hCCCccEEEEEeCCCC---hh--HHHHhh----cc-c-----cCcceeeeeccCCHHH
Q 024248 47 FKVAVLGAAGGIGQPLAMLMK-INPLVSVLHLYDVVNT---PG--VTADIS----HM-D-----TNAVVRGFLGQQQLED 110 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~-~~g~~~eV~LvD~~~~---~~--~~~dl~----~~-~-----~~~~~~~i~~t~d~~~ 110 (270)
.||+|||| |.+|..+|..++ ..|+ +|+++|.+.+ .+ ...+.. .. . ....+..+..++|+ +
T Consensus 310 ~~v~ViGa-G~mG~giA~~~a~~~G~--~V~l~d~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~-~ 385 (708)
T PRK11154 310 NKVGVLGG-GLMGGGIAYVTATKAGL--PVRIKDINPQGINHALKYSWDLLDKKVKRRHLKPSERDKQMALISGTTDY-R 385 (708)
T ss_pred cEEEEECC-chhhHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhcEEEeCCh-H
Confidence 58999998 999999999998 7899 9999999863 11 111111 10 0 01112335567788 6
Q ss_pred HhCCCCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhC-CCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCee
Q 024248 111 ALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLL 189 (270)
Q Consensus 111 al~~ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kvi 189 (270)
++++||+||.++ .+|+++.+++...+++++ |++++ .||.+... ++++.... . .++|++
T Consensus 386 ~~~~aDlViEav--------------~E~~~~K~~v~~~le~~~~~~~il--asnTS~l~---i~~la~~~-~-~p~r~i 444 (708)
T PRK11154 386 GFKHADVVIEAV--------------FEDLALKQQMVAEVEQNCAPHTIF--ASNTSSLP---IGQIAAAA-A-RPEQVI 444 (708)
T ss_pred HhccCCEEeecc--------------cccHHHHHHHHHHHHhhCCCCcEE--EECCCCCC---HHHHHHhc-C-cccceE
Confidence 899999999985 456899999999999998 56655 89988863 45554433 2 345676
Q ss_pred ee-------------------chhhHHHHHHHHHHHhCCCCCcc
Q 024248 190 GV-------------------TMLDVVRANTFVAEVLGLDPREV 214 (270)
Q Consensus 190 G~-------------------t~ldt~r~~~~lA~~l~v~~~~v 214 (270)
|+ |.-++...-..+++.+|..|-.+
T Consensus 445 g~Hff~P~~~~~lVEvv~g~~Ts~~~~~~~~~~~~~~gk~pv~v 488 (708)
T PRK11154 445 GLHYFSPVEKMPLVEVIPHAKTSAETIATTVALAKKQGKTPIVV 488 (708)
T ss_pred EEecCCccccCceEEEECCCCCCHHHHHHHHHHHHHcCCceEEE
Confidence 65 23444444556667777765443
No 67
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.80 E-value=3.5e-08 Score=89.46 Aligned_cols=103 Identities=22% Similarity=0.352 Sum_probs=69.6
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh-HHH----Hhhc-----cccC------cceeeeeccCCHHH
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG-VTA----DISH-----MDTN------AVVRGFLGQQQLED 110 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~-~~~----dl~~-----~~~~------~~~~~i~~t~d~~~ 110 (270)
+||+|+|+ |.+|+.+|..++..|+ +|+++|+++... ... .+.+ .... .....+..++|+++
T Consensus 4 ~kIaViGa-G~mG~~iA~~la~~G~--~V~l~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~~ 80 (287)
T PRK08293 4 KNVTVAGA-GVLGSQIAFQTAFHGF--DVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITLTTDLAE 80 (287)
T ss_pred cEEEEECC-CHHHHHHHHHHHhcCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeEEeCCHHH
Confidence 48999998 9999999999999998 999999986311 111 1110 0000 00122345678988
Q ss_pred HhCCCCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCC-CCEEEEecCCCCC
Q 024248 111 ALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCP-KAIVNLISNPVNS 168 (270)
Q Consensus 111 al~~ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~sNPv~~ 168 (270)
++++||+||+++. ++.+..+++++.+.++++ ++++ ++|.+..
T Consensus 81 a~~~aDlVieavp--------------e~~~~k~~~~~~l~~~~~~~~ii--~sntSt~ 123 (287)
T PRK08293 81 AVKDADLVIEAVP--------------EDPEIKGDFYEELAKVAPEKTIF--ATNSSTL 123 (287)
T ss_pred HhcCCCEEEEecc--------------CCHHHHHHHHHHHHhhCCCCCEE--EECcccC
Confidence 8999999999862 235666778888888775 4543 5666654
No 68
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=98.80 E-value=2e-08 Score=101.86 Aligned_cols=143 Identities=18% Similarity=0.218 Sum_probs=97.3
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC---hh--HHH----Hhhcc-c-----cCcceeeeeccCCHHHH
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PG--VTA----DISHM-D-----TNAVVRGFLGQQQLEDA 111 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~---~~--~~~----dl~~~-~-----~~~~~~~i~~t~d~~~a 111 (270)
.||+|||| |.+|..+|..++..|+ +|+|+|++++ .+ ... .+... . ....+..+..++|+ ++
T Consensus 314 ~~v~ViGa-G~mG~gIA~~~a~~G~--~V~l~d~~~~~l~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 389 (715)
T PRK11730 314 KQAAVLGA-GIMGGGIAYQSASKGV--PVIMKDINQKALDLGMTEAAKLLNKQVERGKIDGAKMAGVLSSIRPTLDY-AG 389 (715)
T ss_pred ceEEEECC-chhHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeEEeCCH-HH
Confidence 48999998 9999999999999999 9999999863 11 111 11110 0 01112235567788 67
Q ss_pred hCCCCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCC-CCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeee
Q 024248 112 LTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCP-KAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLG 190 (270)
Q Consensus 112 l~~ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG 190 (270)
+++||+||.++ .+++++.+++...+++++| ++++ .||.+... ++++.... . .++|++|
T Consensus 390 ~~~aDlViEav--------------~E~l~~K~~vf~~l~~~~~~~~il--asNTSsl~---i~~la~~~-~-~p~r~~g 448 (715)
T PRK11730 390 FERVDVVVEAV--------------VENPKVKAAVLAEVEQKVREDTIL--ASNTSTIS---ISLLAKAL-K-RPENFCG 448 (715)
T ss_pred hcCCCEEEecc--------------cCcHHHHHHHHHHHHhhCCCCcEE--EEcCCCCC---HHHHHhhc-C-CCccEEE
Confidence 99999999985 4568899999999999985 5544 89988863 55554433 2 3567777
Q ss_pred e-------------------chhhHHHHHHHHHHHhCCCCCcc
Q 024248 191 V-------------------TMLDVVRANTFVAEVLGLDPREV 214 (270)
Q Consensus 191 ~-------------------t~ldt~r~~~~lA~~l~v~~~~v 214 (270)
+ |.-++......+++.+|..|-.+
T Consensus 449 ~Hff~P~~~~~lVEvv~g~~T~~~~~~~~~~~~~~lgk~pv~v 491 (715)
T PRK11730 449 MHFFNPVHRMPLVEVIRGEKTSDETIATVVAYASKMGKTPIVV 491 (715)
T ss_pred EecCCcccccceEEeeCCCCCCHHHHHHHHHHHHHhCCceEEe
Confidence 5 23344444455667777766544
No 69
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.79 E-value=3e-08 Score=90.00 Aligned_cols=101 Identities=16% Similarity=0.238 Sum_probs=71.9
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCCh---h--HHHH----hhcccc------CcceeeeeccCCHHHHh
Q 024248 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP---G--VTAD----ISHMDT------NAVVRGFLGQQQLEDAL 112 (270)
Q Consensus 48 KI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~---~--~~~d----l~~~~~------~~~~~~i~~t~d~~~al 112 (270)
||+|||+ |.+|..+|..++..|+ +|+++|+++.. + ...+ +.+... ...+..+..++|+ +++
T Consensus 7 ~V~ViGa-G~mG~~iA~~~a~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~-~~~ 82 (286)
T PRK07819 7 RVGVVGA-GQMGAGIAEVCARAGV--DVLVFETTEELATAGRNRIEKSLERAVSRGKLTERERDAALARLRFTTDL-GDF 82 (286)
T ss_pred EEEEEcc-cHHHHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHHHHHHHHhcccCChhhHHHHHhCeEeeCCH-HHh
Confidence 8999998 9999999999999999 99999998631 1 1111 111100 0112234456788 679
Q ss_pred CCCCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhC-C-CCEEEEecCCCCC
Q 024248 113 TGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-P-KAIVNLISNPVNS 168 (270)
Q Consensus 113 ~~ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p-~a~viv~sNPv~~ 168 (270)
++||+||.++ .++.+..+++...+.+.+ + ++++ +||.+..
T Consensus 83 ~~~d~ViEav--------------~E~~~~K~~l~~~l~~~~~~~~~il--~snTS~~ 124 (286)
T PRK07819 83 ADRQLVIEAV--------------VEDEAVKTEIFAELDKVVTDPDAVL--ASNTSSI 124 (286)
T ss_pred CCCCEEEEec--------------ccCHHHHHHHHHHHHHhhCCCCcEE--EECCCCC
Confidence 9999999985 345778888999999987 4 5554 7777665
No 70
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=98.79 E-value=9.9e-08 Score=86.76 Aligned_cols=170 Identities=17% Similarity=0.086 Sum_probs=102.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh-HHHHhhccc-cCccee----eeeccCCHHHHhCCCCEEE
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG-VTADISHMD-TNAVVR----GFLGQQQLEDALTGMDIVI 119 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~-~~~dl~~~~-~~~~~~----~i~~t~d~~~al~~ADvVI 119 (270)
.+||.|+||+||+|++++..|+.+|+ +|++++++.... ....+.... ....+. .+.....++++++++|+||
T Consensus 4 ~~~ilVtGatGfIG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 81 (322)
T PLN02662 4 GKVVCVTGASGYIASWLVKLLLQRGY--TVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVF 81 (322)
T ss_pred CCEEEEECChHHHHHHHHHHHHHCCC--EEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEE
Confidence 36899999999999999999999999 999888865321 111121110 011111 1222335777889999999
Q ss_pred EcCCCCCCCCCch-hhhHHhhHHHHHHHHHHHhHh-CCCCEEEEecCCC---CCcH-----HHHHHHHHHhCCC-C----
Q 024248 120 IPAGVPRKPGMTR-DDLFNINAGIVKTLCEGIAKC-CPKAIVNLISNPV---NSTV-----PIAAEVFKKVGTY-D---- 184 (270)
Q Consensus 120 i~ag~~~~~g~~r-~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~sNPv---~~~~-----~i~t~~~~~~sg~-p---- 184 (270)
++|+......... .+++..|+....++++.+.+. ... .++++|.-. .... ..+.+ .... |
T Consensus 82 h~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~-~~v~~SS~~~~~y~~~~~~~~~~~~E----~~~~~p~~~~ 156 (322)
T PLN02662 82 HTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVK-RVVVTSSMAAVAYNGKPLTPDVVVDE----TWFSDPAFCE 156 (322)
T ss_pred EeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCC-EEEEccCHHHhcCCCcCCCCCCcCCc----ccCCChhHhh
Confidence 9997542211122 356788999999999998875 333 455444211 0000 00110 0000 1
Q ss_pred -CCCeeeechhhHHHHHHHHHHHhCCCCCccc-eEEEccC
Q 024248 185 -PKRLLGVTMLDVVRANTFVAEVLGLDPREVD-VPVVGGH 222 (270)
Q Consensus 185 -~~kviG~t~ldt~r~~~~lA~~l~v~~~~v~-~~V~G~h 222 (270)
+.-.+|.++....++...+++..+++..-++ +.++|..
T Consensus 157 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~ 196 (322)
T PLN02662 157 ESKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPL 196 (322)
T ss_pred cccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCC
Confidence 0124666777777777777788888877775 4788865
No 71
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.78 E-value=6e-08 Score=93.94 Aligned_cols=170 Identities=18% Similarity=0.210 Sum_probs=112.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCCh--hHHHHhhccccCcceee----eeccCCHHHHhCC--CCE
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTNAVVRG----FLGQQQLEDALTG--MDI 117 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~--~~~~dl~~~~~~~~~~~----i~~t~d~~~al~~--ADv 117 (270)
...|.|+||+|.+|+.++..++..+. ++++++|+++.. ....++........+.. +.....++.++++ .|+
T Consensus 250 gK~vLVTGagGSiGsel~~qil~~~p-~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd~ 328 (588)
T COG1086 250 GKTVLVTGGGGSIGSELCRQILKFNP-KEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVDI 328 (588)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHhcCC-CEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCCce
Confidence 45899999999999999999988755 699999998732 12233443211122221 2222235668888 999
Q ss_pred EEEcCCCCCCCCC--chhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeeeechhh
Q 024248 118 VIIPAGVPRKPGM--TRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGVTMLD 195 (270)
Q Consensus 118 VIi~ag~~~~~g~--~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG~t~ld 195 (270)
|+++|....-|-. ...+-+..|+-..+++++++.++.-+.++++.|.-+ ..|-+++|.|+.-
T Consensus 329 VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKA----------------V~PtNvmGaTKr~ 392 (588)
T COG1086 329 VFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKA----------------VNPTNVMGATKRL 392 (588)
T ss_pred EEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcc----------------cCCchHhhHHHHH
Confidence 9999975443332 245667899999999999999888777777766211 1233456676655
Q ss_pred HHHHHHHHHHHhC---CCCCcc-ceEEEccCCCCceeeccccc
Q 024248 196 VVRANTFVAEVLG---LDPREV-DVPVVGGHAGVTILPLLSQV 234 (270)
Q Consensus 196 t~r~~~~lA~~l~---v~~~~v-~~~V~G~hg~~~~vp~~S~~ 234 (270)
+..+...+++..+ -.-..| ++.|+|..| +.+|+|.+-
T Consensus 393 aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrG--SViPlFk~Q 433 (588)
T COG1086 393 AEKLFQAANRNVSGTGTRFCVVRFGNVLGSRG--SVIPLFKKQ 433 (588)
T ss_pred HHHHHHHHhhccCCCCcEEEEEEecceecCCC--CCHHHHHHH
Confidence 5555555545333 222334 469999997 489998854
No 72
>PLN02572 UDP-sulfoquinovose synthase
Probab=98.77 E-value=7.7e-08 Score=92.44 Aligned_cols=177 Identities=13% Similarity=0.065 Sum_probs=105.3
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC---hh--------------H-HHHhhccccCcceee----
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PG--------------V-TADISHMDTNAVVRG---- 101 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~---~~--------------~-~~dl~~~~~~~~~~~---- 101 (270)
.+.|||.|+||+||||++++..|+.+|+ +|+++|+... .. . ...+.+.. ...+..
T Consensus 45 ~~~k~VLVTGatGfIGs~Lv~~L~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~v~~v~~D 121 (442)
T PLN02572 45 SKKKKVMVIGGDGYCGWATALHLSKRGY--EVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVS-GKEIELYVGD 121 (442)
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEeccccccccccccccccccccchHHHHHHHHHhh-CCcceEEECC
Confidence 3457899999999999999999999998 9999985321 00 0 00000000 001111
Q ss_pred eeccCCHHHHhC--CCCEEEEcCCCCCCC-C-Cc---hhhhHHhhHHHHHHHHHHHhHhCCCCEEEEec-CCCCCcHH-H
Q 024248 102 FLGQQQLEDALT--GMDIVIIPAGVPRKP-G-MT---RDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS-NPVNSTVP-I 172 (270)
Q Consensus 102 i~~t~d~~~al~--~ADvVIi~ag~~~~~-g-~~---r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~s-NPv~~~~~-i 172 (270)
+.....++++++ ++|+||++|+....+ . .+ ....+..|+....++++.+++.+....++.+| .-+..... -
T Consensus 122 l~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~~~ 201 (442)
T PLN02572 122 ICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPNID 201 (442)
T ss_pred CCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCCCC
Confidence 111223445565 489999998643211 0 11 12335689999999999999877654555443 21211000 0
Q ss_pred HHHH-HH------HhC---CCCCCCeeeechhhHHHHHHHHHHHhCCCCCccc-eEEEccCC
Q 024248 173 AAEV-FK------KVG---TYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVD-VPVVGGHA 223 (270)
Q Consensus 173 ~t~~-~~------~~s---g~p~~kviG~t~ldt~r~~~~lA~~l~v~~~~v~-~~V~G~hg 223 (270)
+.+- +. ..+ -..+...+|.+++....+...+++.+|++...++ +.|+|.+.
T Consensus 202 ~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~ 263 (442)
T PLN02572 202 IEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRT 263 (442)
T ss_pred CcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCC
Confidence 0000 00 000 1123457899888888888889999999888885 58999763
No 73
>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial. Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).
Probab=98.77 E-value=1.7e-08 Score=102.52 Aligned_cols=143 Identities=18% Similarity=0.217 Sum_probs=97.2
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC---hh--HHHHhhc-----cc-----cCcceeeeeccCCHHHH
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PG--VTADISH-----MD-----TNAVVRGFLGQQQLEDA 111 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~---~~--~~~dl~~-----~~-----~~~~~~~i~~t~d~~~a 111 (270)
.||+|||| |.+|+.+|..++..|+ +|+|+|++++ .+ ...+..+ .. ....+..+..++|+ ++
T Consensus 336 ~~v~ViGa-G~MG~gIA~~~a~~G~--~V~l~d~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 411 (737)
T TIGR02441 336 KTLAVLGA-GLMGAGIAQVSVDKGL--KTVLKDATPAGLDRGQQQVFKGLNKKVKRKKITSLERDSILSNLTPTLDY-SG 411 (737)
T ss_pred cEEEEECC-CHhHHHHHHHHHhCCC--cEEEecCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCCH-HH
Confidence 48999998 9999999999999999 9999999863 11 1111111 00 01112235567788 67
Q ss_pred hCCCCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCC-CCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeee
Q 024248 112 LTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCP-KAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLG 190 (270)
Q Consensus 112 l~~ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG 190 (270)
+++||+||.++ .+|+++.+++...++++++ ++++ .||.+... ++++.... . .|+|++|
T Consensus 412 ~~~aDlViEAv--------------~E~l~~K~~vf~~l~~~~~~~~il--asNTSsl~---i~~la~~~-~-~p~r~ig 470 (737)
T TIGR02441 412 FKNADMVIEAV--------------FEDLSLKHKVIKEVEAVVPPHCII--ASNTSALP---IKDIAAVS-S-RPEKVIG 470 (737)
T ss_pred hccCCeehhhc--------------cccHHHHHHHHHHHHhhCCCCcEE--EEcCCCCC---HHHHHhhc-C-CccceEE
Confidence 99999999985 4568999999999999985 5654 89988864 45444332 2 3567777
Q ss_pred e-------------------chhhHHHHHHHHHHHhCCCCCcc
Q 024248 191 V-------------------TMLDVVRANTFVAEVLGLDPREV 214 (270)
Q Consensus 191 ~-------------------t~ldt~r~~~~lA~~l~v~~~~v 214 (270)
+ |.-++......+++.+|..|--+
T Consensus 471 ~Hff~P~~~m~LvEvv~g~~Ts~~~~~~~~~~~~~lgk~pv~v 513 (737)
T TIGR02441 471 MHYFSPVDKMQLLEIITHDGTSKDTLASAVAVGLKQGKVVIVV 513 (737)
T ss_pred EeccCCcccCceEEEeCCCCCCHHHHHHHHHHHHHCCCeEEEE
Confidence 5 33444444566777777665433
No 74
>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog.
Probab=98.74 E-value=3.3e-08 Score=99.97 Aligned_cols=143 Identities=17% Similarity=0.272 Sum_probs=95.2
Q ss_pred CeEEEEcCCCchHHHHHHHHH-hCCCccEEEEEeCCCC---hh--HHHH-hh---c-cc-----cCcceeeeeccCCHHH
Q 024248 47 FKVAVLGAAGGIGQPLAMLMK-INPLVSVLHLYDVVNT---PG--VTAD-IS---H-MD-----TNAVVRGFLGQQQLED 110 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~-~~g~~~eV~LvD~~~~---~~--~~~d-l~---~-~~-----~~~~~~~i~~t~d~~~ 110 (270)
.||+|||+ |.+|+.+|..++ ..|+ +|+++|.+++ .+ ...+ +. . .. ....+..+..++|+ +
T Consensus 305 ~~v~ViGa-G~mG~~iA~~~a~~~G~--~V~l~d~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~-~ 380 (699)
T TIGR02440 305 KKVGILGG-GLMGGGIASVTATKAGI--PVRIKDINPQGINNALKYAWKLLDKGVKRRHMTPAERDNQMALITGTTDY-R 380 (699)
T ss_pred cEEEEECC-cHHHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHcCeEEeCCh-H
Confidence 48999998 999999999988 4799 9999999863 11 1111 11 0 00 00112335567788 6
Q ss_pred HhCCCCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCC-CCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCee
Q 024248 111 ALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCP-KAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLL 189 (270)
Q Consensus 111 al~~ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kvi 189 (270)
++++||+||.++ .+++++.+++...+.++++ ++++ .||.+... ++++.... -.++|++
T Consensus 381 ~~~~adlViEav--------------~E~l~~K~~v~~~l~~~~~~~~il--asnTS~l~---i~~la~~~--~~p~r~~ 439 (699)
T TIGR02440 381 GFKDVDIVIEAV--------------FEDLALKHQMVKDIEQECAAHTIF--ASNTSSLP---IGQIAAAA--SRPENVI 439 (699)
T ss_pred HhccCCEEEEec--------------cccHHHHHHHHHHHHhhCCCCcEE--EeCCCCCC---HHHHHHhc--CCcccEE
Confidence 799999999985 3468889999999999985 5544 89988863 45544433 2356676
Q ss_pred ee-------------------chhhHHHHHHHHHHHhCCCCCcc
Q 024248 190 GV-------------------TMLDVVRANTFVAEVLGLDPREV 214 (270)
Q Consensus 190 G~-------------------t~ldt~r~~~~lA~~l~v~~~~v 214 (270)
|+ |.-++......+.+.+|..|--+
T Consensus 440 g~HffnP~~~~~lVEvv~g~~T~~~~~~~~~~~~~~~gk~pv~v 483 (699)
T TIGR02440 440 GLHYFSPVEKMPLVEVIPHAGTSEQTIATTVALAKKQGKTPIVV 483 (699)
T ss_pred EEecCCccccCceEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 65 33344444455667777766444
No 75
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=98.74 E-value=2.6e-07 Score=83.20 Aligned_cols=174 Identities=16% Similarity=0.088 Sum_probs=101.7
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCCh---hHHHHhhccccCccee-eeeccCCHHHHhCC--CCEEEEc
Q 024248 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP---GVTADISHMDTNAVVR-GFLGQQQLEDALTG--MDIVIIP 121 (270)
Q Consensus 48 KI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~---~~~~dl~~~~~~~~~~-~i~~t~d~~~al~~--ADvVIi~ 121 (270)
||.|+||+|++|.+++..|+..+...+|+++|+.... ....++........+. .+....++.+++++ +|+||++
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~ 80 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHF 80 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEc
Confidence 5899999999999999999887632289999874311 1111221110000000 11122345566776 8999999
Q ss_pred CCCCCC-C-CCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCC-CCCcHHHHHHHHHHhCCCCCCCeeeechhhHHH
Q 024248 122 AGVPRK-P-GMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP-VNSTVPIAAEVFKKVGTYDPKRLLGVTMLDVVR 198 (270)
Q Consensus 122 ag~~~~-~-g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNP-v~~~~~i~t~~~~~~sg~p~~kviG~t~ldt~r 198 (270)
++.... . ......++..|+.....+++.+.+...+..++.+|.. +.....-.. .+.+.....+...+|.++....+
T Consensus 81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~-~~~e~~~~~~~~~Y~~sK~~~e~ 159 (317)
T TIGR01181 81 AAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGD-AFTETTPLAPSSPYSASKAASDH 159 (317)
T ss_pred ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCC-CcCCCCCCCCCCchHHHHHHHHH
Confidence 875321 1 1123456788999999999999876555556655531 110000000 00011122334457777777777
Q ss_pred HHHHHHHHhCCCCCccce-EEEccC
Q 024248 199 ANTFVAEVLGLDPREVDV-PVVGGH 222 (270)
Q Consensus 199 ~~~~lA~~l~v~~~~v~~-~V~G~h 222 (270)
+...+++..+++..-++. .++|..
T Consensus 160 ~~~~~~~~~~~~~~i~R~~~i~G~~ 184 (317)
T TIGR01181 160 LVRAYHRTYGLPALITRCSNNYGPY 184 (317)
T ss_pred HHHHHHHHhCCCeEEEEeccccCCC
Confidence 777788888888777754 788864
No 76
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=98.74 E-value=2.6e-07 Score=85.41 Aligned_cols=164 Identities=13% Similarity=0.087 Sum_probs=99.6
Q ss_pred CeEEEEcCCCchHHHHHHHHHhC-CCccEEEEEeCCCChhHHHHhhccccCcceeeee-----ccCCHHHHhCCCCEEEE
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFL-----GQQQLEDALTGMDIVII 120 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~-g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~-----~t~d~~~al~~ADvVIi 120 (270)
|||.|+||+||+|++++..|+.. ++ +|+++|+.... ..++... ..+..+. ....+.++++++|+||+
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~--~V~~~~r~~~~--~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH 74 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDW--EVYGMDMQTDR--LGDLVNH---PRMHFFEGDITINKEWIEYHVKKCDVILP 74 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCC--eEEEEeCcHHH--HHHhccC---CCeEEEeCCCCCCHHHHHHHHcCCCEEEE
Confidence 58999999999999999999875 67 99999975321 1112111 1111111 01124456789999999
Q ss_pred cCCCCCC--CCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCC-CCCcH--HHHHHHHHHhCCC------CCCCee
Q 024248 121 PAGVPRK--PGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP-VNSTV--PIAAEVFKKVGTY------DPKRLL 189 (270)
Q Consensus 121 ~ag~~~~--~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNP-v~~~~--~i~t~~~~~~sg~------p~~kvi 189 (270)
+++.... ...+....+..|+....++++.+++.. ..++.+|.. +.... ..+. .+.+-+ ++...+
T Consensus 75 ~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~--~~~v~~SS~~vyg~~~~~~~~---ee~~~~~~~~~~~p~~~Y 149 (347)
T PRK11908 75 LVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPSTSEVYGMCPDEEFD---PEASPLVYGPINKPRWIY 149 (347)
T ss_pred CcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC--CeEEEEecceeeccCCCcCcC---ccccccccCcCCCccchH
Confidence 9875321 122334456778899999999998753 455555532 11000 0000 000000 123357
Q ss_pred eechhhHHHHHHHHHHHhCCCCCccc-eEEEccC
Q 024248 190 GVTMLDVVRANTFVAEVLGLDPREVD-VPVVGGH 222 (270)
Q Consensus 190 G~t~ldt~r~~~~lA~~l~v~~~~v~-~~V~G~h 222 (270)
|.++.........+++..+++..-++ +.++|.+
T Consensus 150 ~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~ 183 (347)
T PRK11908 150 ACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPG 183 (347)
T ss_pred HHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCC
Confidence 77777777777777888898887775 5888964
No 77
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=98.72 E-value=2.8e-07 Score=85.04 Aligned_cols=171 Identities=12% Similarity=-0.012 Sum_probs=98.1
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCCh---hHHHHhhccc---cCcceee----eeccCCHHHHhCC--
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP---GVTADISHMD---TNAVVRG----FLGQQQLEDALTG-- 114 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~---~~~~dl~~~~---~~~~~~~----i~~t~d~~~al~~-- 114 (270)
+||.|+||+||+|++++..|+..|+ +|+++|+.... .....+.... ....+.. +.....+++++++
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~ 78 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGY--EVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIK 78 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCC--EEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCC
Confidence 4899999999999999999999998 99999986431 1111111000 0011111 1112234556664
Q ss_pred CCEEEEcCCCCCCC-C-CchhhhHHhhHHHHHHHHHHHhHhCC-C-CEEEEecC-CCCCcHHHHHHHHHHhCCCCCCCee
Q 024248 115 MDIVIIPAGVPRKP-G-MTRDDLFNINAGIVKTLCEGIAKCCP-K-AIVNLISN-PVNSTVPIAAEVFKKVGTYDPKRLL 189 (270)
Q Consensus 115 ADvVIi~ag~~~~~-g-~~r~~~~~~N~~i~~~i~~~i~~~~p-~-a~viv~sN-Pv~~~~~i~t~~~~~~sg~p~~kvi 189 (270)
+|+||++|+..... . ......+..|+....++++.+.+.+- . ..++++|. -+.....-. ...+...+.+...+
T Consensus 79 ~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~--~~~E~~~~~p~~~Y 156 (343)
T TIGR01472 79 PTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEI--PQNETTPFYPRSPY 156 (343)
T ss_pred CCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCC--CCCCCCCCCCCChh
Confidence 59999999864321 1 11233456688888999999987652 2 24554442 111100000 00111123345567
Q ss_pred eechhhHHHHHHHHHHHhCCCCCccc-eEEEcc
Q 024248 190 GVTMLDVVRANTFVAEVLGLDPREVD-VPVVGG 221 (270)
Q Consensus 190 G~t~ldt~r~~~~lA~~l~v~~~~v~-~~V~G~ 221 (270)
|.++....++.+.+++.++++..... +.++|.
T Consensus 157 ~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp 189 (343)
T TIGR01472 157 AAAKLYAHWITVNYREAYGLFAVNGILFNHESP 189 (343)
T ss_pred HHHHHHHHHHHHHHHHHhCCceEEEeecccCCC
Confidence 88888888888888888887644322 234554
No 78
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=98.72 E-value=2.5e-07 Score=85.82 Aligned_cols=174 Identities=17% Similarity=0.072 Sum_probs=102.8
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhH--HHHhhccccCcceee----eeccCCHHHHhCCCCE
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV--TADISHMDTNAVVRG----FLGQQQLEDALTGMDI 117 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~--~~dl~~~~~~~~~~~----i~~t~d~~~al~~ADv 117 (270)
+..|||.|+||+|++|++++..|+++|+ +|++++++..... ..++... ..+.. +.....++++++++|+
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~d~ 82 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRGY--TVHATLRDPAKSLHLLSKWKEG---DRLRLFRADLQEEGSFDEAVKGCDG 82 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHhhccC---CeEEEEECCCCCHHHHHHHHcCCCE
Confidence 4467999999999999999999999998 9999887643211 1122111 11111 1111235567789999
Q ss_pred EEEcCCCCCCC---C-Cchhh-----hHHhhHHHHHHHHHHHhHhCCCCEEEEecC-CCCCcH-------HHHHHHHH--
Q 024248 118 VIIPAGVPRKP---G-MTRDD-----LFNINAGIVKTLCEGIAKCCPKAIVNLISN-PVNSTV-------PIAAEVFK-- 178 (270)
Q Consensus 118 VIi~ag~~~~~---g-~~r~~-----~~~~N~~i~~~i~~~i~~~~p~a~viv~sN-Pv~~~~-------~i~t~~~~-- 178 (270)
||++|+..... . .+..+ .+..|+....++++.+.+...-..|+++|. .+.... ..+.+-..
T Consensus 83 Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p 162 (353)
T PLN02896 83 VFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTP 162 (353)
T ss_pred EEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCc
Confidence 99999764211 1 11122 233445788889998877532234555543 221100 00111000
Q ss_pred -H--hCCCCCCCeeeechhhHHHHHHHHHHHhCCCCCccc-eEEEccC
Q 024248 179 -K--VGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVD-VPVVGGH 222 (270)
Q Consensus 179 -~--~sg~p~~kviG~t~ldt~r~~~~lA~~l~v~~~~v~-~~V~G~h 222 (270)
. ....++.-.+|.+++...++...+++..+++..-++ +.|+|.+
T Consensus 163 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~ 210 (353)
T PLN02896 163 IDHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPF 210 (353)
T ss_pred HHHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCC
Confidence 0 000112236888888888888889999998887775 5888975
No 79
>PLN02353 probable UDP-glucose 6-dehydrogenase
Probab=98.71 E-value=3.1e-07 Score=88.94 Aligned_cols=119 Identities=14% Similarity=0.181 Sum_probs=76.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccc-------cCc-----ceeeeeccCCHHHHhCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD-------TNA-----VVRGFLGQQQLEDALTG 114 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~-------~~~-----~~~~i~~t~d~~~al~~ 114 (270)
|||+|+|+ |+||..+|..|+..|..-+|+++|+++.+ +..|.... ... .-+.+..|+++++++++
T Consensus 2 m~I~ViG~-GyvGl~~A~~lA~~g~g~~V~gvD~~~~~--v~~l~~g~~~~~e~gl~ell~~~~~~~l~~t~~~~~~i~~ 78 (473)
T PLN02353 2 VKICCIGA-GYVGGPTMAVIALKCPDIEVVVVDISVPR--IDAWNSDQLPIYEPGLDEVVKQCRGKNLFFSTDVEKHVAE 78 (473)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCeEEEEECCHHH--HHHHHcCCCccCCCCHHHHHHHhhcCCEEEEcCHHHHHhc
Confidence 79999997 99999999999988532289999998642 11111110 000 00114457788889999
Q ss_pred CCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEe--cCCCCCc
Q 024248 115 MDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI--SNPVNST 169 (270)
Q Consensus 115 ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~--sNPv~~~ 169 (270)
||++|+|+++|...+....+ -..++..+.+.++.|.++.++..+++. |-|..+.
T Consensus 79 advi~I~V~TP~~~~g~~~~-~~~Dls~v~~a~~~i~~~l~~~~lVv~~STvp~Gtt 134 (473)
T PLN02353 79 ADIVFVSVNTPTKTRGLGAG-KAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTA 134 (473)
T ss_pred CCEEEEEeCCCCCCCCCcCC-CCCcHHHHHHHHHHHHhhCCCCcEEEEeCCCCCChH
Confidence 99999999998643210000 123456678888888887655434333 4677643
No 80
>PLN02214 cinnamoyl-CoA reductase
Probab=98.71 E-value=2.8e-07 Score=85.36 Aligned_cols=170 Identities=16% Similarity=0.073 Sum_probs=105.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhH---HHHhhccccCccee----eeeccCCHHHHhCCCCEE
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV---TADISHMDTNAVVR----GFLGQQQLEDALTGMDIV 118 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~---~~dl~~~~~~~~~~----~i~~t~d~~~al~~ADvV 118 (270)
.++|.|+||+||+|++++..|+++|+ +|++++++..... ...+... ...+. .+....+++++++++|+|
T Consensus 10 ~~~vlVTGatGfIG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~d~V 85 (342)
T PLN02214 10 GKTVCVTGAGGYIASWIVKILLERGY--TVKGTVRNPDDPKNTHLRELEGG--KERLILCKADLQDYEALKAAIDGCDGV 85 (342)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcC--EEEEEeCCchhhhHHHHHHhhCC--CCcEEEEecCcCChHHHHHHHhcCCEE
Confidence 45899999999999999999999998 9999988643211 1122111 01111 122233567788999999
Q ss_pred EEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCC--CCCcH-----HHHHHHHHHhCCC--CCCCee
Q 024248 119 IIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP--VNSTV-----PIAAEVFKKVGTY--DPKRLL 189 (270)
Q Consensus 119 Ii~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNP--v~~~~-----~i~t~~~~~~sg~--p~~kvi 189 (270)
|++|+... ....+.+..|+.....+++.+.+.... .|+++|.- +.... ..+++-.+....+ .+...+
T Consensus 86 ih~A~~~~---~~~~~~~~~nv~gt~~ll~aa~~~~v~-r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y 161 (342)
T PLN02214 86 FHTASPVT---DDPEQMVEPAVNGAKFVINAAAEAKVK-RVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWY 161 (342)
T ss_pred EEecCCCC---CCHHHHHHHHHHHHHHHHHHHHhcCCC-EEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHH
Confidence 99997542 233456788999999999999876533 44444431 11000 0011100000000 122346
Q ss_pred eechhhHHHHHHHHHHHhCCCCCccc-eEEEccCC
Q 024248 190 GVTMLDVVRANTFVAEVLGLDPREVD-VPVVGGHA 223 (270)
Q Consensus 190 G~t~ldt~r~~~~lA~~l~v~~~~v~-~~V~G~hg 223 (270)
|.++....++...+++..|++...++ +.|+|.+.
T Consensus 162 ~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~ 196 (342)
T PLN02214 162 CYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPL 196 (342)
T ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCC
Confidence 77777777888888888899887775 58999753
No 81
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=98.70 E-value=3.5e-07 Score=84.46 Aligned_cols=175 Identities=15% Similarity=0.127 Sum_probs=102.4
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCccee----eeeccCCHHHHhC--CCCEEEE
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVR----GFLGQQQLEDALT--GMDIVII 120 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~----~i~~t~d~~~al~--~ADvVIi 120 (270)
|||.|+||+|++|++++..|+.+|. ..|+.+|+.........+........+. .+....+++++++ ++|+||+
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 79 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQ-DSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMH 79 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCC-CeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEE
Confidence 7999999999999999999998886 2466677643211111111100001111 1112223455565 4899999
Q ss_pred cCCCCCC--CCCchhhhHHhhHHHHHHHHHHHhHhC-------CC-CEEEEecCC-CCCcHHHHH--------HHHHHhC
Q 024248 121 PAGVPRK--PGMTRDDLFNINAGIVKTLCEGIAKCC-------PK-AIVNLISNP-VNSTVPIAA--------EVFKKVG 181 (270)
Q Consensus 121 ~ag~~~~--~g~~r~~~~~~N~~i~~~i~~~i~~~~-------p~-a~viv~sNP-v~~~~~i~t--------~~~~~~s 181 (270)
+|+.... ......+++..|+.....+++.+.++. .. ..++.+|.. +......-- ..+.+..
T Consensus 80 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~ 159 (352)
T PRK10084 80 LAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETT 159 (352)
T ss_pred CCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccccC
Confidence 9976421 112235678899999999999998752 12 245545432 211000000 0001111
Q ss_pred CCCCCCeeeechhhHHHHHHHHHHHhCCCCCccc-eEEEccC
Q 024248 182 TYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVD-VPVVGGH 222 (270)
Q Consensus 182 g~p~~kviG~t~ldt~r~~~~lA~~l~v~~~~v~-~~V~G~h 222 (270)
.+.+...+|.++....++...+++.++++...++ ..|+|++
T Consensus 160 ~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~ 201 (352)
T PRK10084 160 AYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPY 201 (352)
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCC
Confidence 2334456888888888888888888998877775 4788976
No 82
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=98.69 E-value=4.6e-07 Score=83.76 Aligned_cols=172 Identities=15% Similarity=0.092 Sum_probs=103.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCccee----eeeccCCHHHHhC--CCCEEEE
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVR----GFLGQQQLEDALT--GMDIVII 120 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~----~i~~t~d~~~al~--~ADvVIi 120 (270)
+||.|+||+||||++++..|..+|. ..++++|+.........+........+. .+....+++++++ ++|+||+
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih 80 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETS-DAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMH 80 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCC-CEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEE
Confidence 4899999999999999999999886 2466777653211111111100000111 1111223555666 4899999
Q ss_pred cCCCCCCC--CCchhhhHHhhHHHHHHHHHHHhHhC-------CC-CEEEEecCC-CCCcH----HHHHHHHHHhCCCCC
Q 024248 121 PAGVPRKP--GMTRDDLFNINAGIVKTLCEGIAKCC-------PK-AIVNLISNP-VNSTV----PIAAEVFKKVGTYDP 185 (270)
Q Consensus 121 ~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~-------p~-a~viv~sNP-v~~~~----~i~t~~~~~~sg~p~ 185 (270)
+||..... .....+++..|+.....+++.+.++. +. ..++.+|.. +.... ..++ +.....+
T Consensus 81 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~----E~~~~~p 156 (355)
T PRK10217 81 LAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFT----ETTPYAP 156 (355)
T ss_pred CCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcC----CCCCCCC
Confidence 99864321 11234567889999999999998642 12 245555432 11100 0011 1111234
Q ss_pred CCeeeechhhHHHHHHHHHHHhCCCCCccc-eEEEccCC
Q 024248 186 KRLLGVTMLDVVRANTFVAEVLGLDPREVD-VPVVGGHA 223 (270)
Q Consensus 186 ~kviG~t~ldt~r~~~~lA~~l~v~~~~v~-~~V~G~hg 223 (270)
...+|.++....++...+++.++++..-++ +.|+|++.
T Consensus 157 ~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~ 195 (355)
T PRK10217 157 SSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYH 195 (355)
T ss_pred CChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCC
Confidence 455788888888888888999998877775 58899763
No 83
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=98.69 E-value=2.5e-07 Score=83.87 Aligned_cols=167 Identities=16% Similarity=0.097 Sum_probs=99.4
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCCCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPR 126 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag~~~ 126 (270)
|||.|+|++|++|++++..|+.+|+ +|+++|++..... ++.+.........+....+++++++++|+||++++...
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~--~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~ 76 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGE--EVRVLVRPTSDRR--NLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAADYR 76 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCC--EEEEEEecCcccc--ccccCCceEEEeeCCCHHHHHHHHhCCCEEEEeceecc
Confidence 6899999999999999999999998 9999998753211 11111000000011112246677889999999986532
Q ss_pred CCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCC-CCc---HHHHHHHHHHhCCCCCC---CeeeechhhHHHH
Q 024248 127 KPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPV-NST---VPIAAEVFKKVGTYDPK---RLLGVTMLDVVRA 199 (270)
Q Consensus 127 ~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv-~~~---~~i~t~~~~~~sg~p~~---kviG~t~ldt~r~ 199 (270)
....+..+....|+.....+++.+.+..-. .++++|... ... -...+ +.....+. ..++.++....++
T Consensus 77 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~SS~~~~~~~~~~~~~~----e~~~~~~~~~~~~Y~~sK~~~e~~ 151 (328)
T TIGR03466 77 LWAPDPEEMYAANVEGTRNLLRAALEAGVE-RVVYTSSVATLGVRGDGTPAD----ETTPSSLDDMIGHYKRSKFLAEQA 151 (328)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHhCCC-eEEEEechhhcCcCCCCCCcC----ccCCCCcccccChHHHHHHHHHHH
Confidence 222334566788999999999998876433 444444321 100 00000 00001111 1244466666677
Q ss_pred HHHHHHHhCCCCCccc-eEEEccC
Q 024248 200 NTFVAEVLGLDPREVD-VPVVGGH 222 (270)
Q Consensus 200 ~~~lA~~l~v~~~~v~-~~V~G~h 222 (270)
...+++..+++..-++ +.++|.+
T Consensus 152 ~~~~~~~~~~~~~ilR~~~~~G~~ 175 (328)
T TIGR03466 152 ALEMAAEKGLPVVIVNPSTPIGPR 175 (328)
T ss_pred HHHHHHhcCCCEEEEeCCccCCCC
Confidence 7777777788776665 4777854
No 84
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=98.67 E-value=9e-07 Score=77.15 Aligned_cols=150 Identities=21% Similarity=0.153 Sum_probs=86.3
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCccee-eeeccCCHHHHhCCCCEEEEcCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAVVR-GFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~~~-~i~~t~d~~~al~~ADvVIi~ag 123 (270)
|||+|||++|.+|++++..|++.|+ +|.+++++++.. ...+..+........ .+.. ++.+++++++|+||+++.
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~--~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~~-~~~~ea~~~aDvVilavp 77 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGN--KIIIGSRDLEKAEEAAAKALEELGHGGSDIKVTG-ADNAEAAKRADVVILAVP 77 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCC--EEEEEEcCHHHHHHHHHHHHhhccccCCCceEEE-eChHHHHhcCCEEEEECC
Confidence 7999998459999999999999997 999999875422 112221110000000 0111 244678999999999862
Q ss_pred CCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCCCc-----------HHHHHHHHHHhCCCCC-CCeeee
Q 024248 124 VPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNST-----------VPIAAEVFKKVGTYDP-KRLLGV 191 (270)
Q Consensus 124 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~~~-----------~~i~t~~~~~~sg~p~-~kviG~ 191 (270)
. ..+.++++.+.....+.++|-++||.... .-..++.+++. +|. .+|+..
T Consensus 78 ~----------------~~~~~~l~~l~~~l~~~vvI~~~ngi~~~~~~~~~~~~~~~~s~~e~l~~~--~p~~~~VVka 139 (219)
T TIGR01915 78 W----------------DHVLKTLESLRDELSGKLVISPVVPLASDGGKGARYLPPEEGSAAEQAAAL--LPETSRVVAA 139 (219)
T ss_pred H----------------HHHHHHHHHHHHhccCCEEEEeccCceecCCCCceecCCCCCcHHHHHHHh--CCCCCeEeec
Confidence 1 11233444444433446777788987631 00123555554 566 677766
Q ss_pred -chhhHHHHHHHHHHHhCCCCCccceEEEccCC
Q 024248 192 -TMLDVVRANTFVAEVLGLDPREVDVPVVGGHA 223 (270)
Q Consensus 192 -t~ldt~r~~~~lA~~l~v~~~~v~~~V~G~hg 223 (270)
..+....+.. ...+.....++.|+..
T Consensus 140 ~~~~~a~~~~~------~~~~~~~~~~v~Gdd~ 166 (219)
T TIGR01915 140 FHNLSAVLLQD------VDDEVDCDVLVCGDDE 166 (219)
T ss_pred cccCCHHHhcC------CCCCCCCCEEEECCCH
Confidence 4444322221 1233445667888754
No 85
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.67 E-value=1.6e-07 Score=84.84 Aligned_cols=103 Identities=21% Similarity=0.344 Sum_probs=68.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh---H--H----HHhhcccc------CcceeeeeccCCHHHH
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG---V--T----ADISHMDT------NAVVRGFLGQQQLEDA 111 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~---~--~----~dl~~~~~------~~~~~~i~~t~d~~~a 111 (270)
+||+|||+ |.+|..++..++..|+ +|+++|++++.. . . ..+..... ...+..+..++|+ ++
T Consensus 4 ~kI~VIG~-G~mG~~ia~~la~~g~--~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~l~~~~~~-~~ 79 (282)
T PRK05808 4 QKIGVIGA-GTMGNGIAQVCAVAGY--DVVMVDISDAAVDRGLATITKSLDRLVKKGKMTEADKEAALARITGTTDL-DD 79 (282)
T ss_pred cEEEEEcc-CHHHHHHHHHHHHCCC--ceEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCCH-HH
Confidence 38999998 9999999999999998 999999986421 0 0 01111100 0011123346677 46
Q ss_pred hCCCCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCC-CCEEEEecCCCCCc
Q 024248 112 LTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCP-KAIVNLISNPVNST 169 (270)
Q Consensus 112 l~~ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~sNPv~~~ 169 (270)
+++||+||+++ .++....+++++.+.++++ ++++ +||.+...
T Consensus 80 ~~~aDlVi~av--------------~e~~~~k~~~~~~l~~~~~~~~il--~s~ts~~~ 122 (282)
T PRK05808 80 LKDADLVIEAA--------------TENMDLKKKIFAQLDEIAKPEAIL--ATNTSSLS 122 (282)
T ss_pred hccCCeeeecc--------------cccHHHHHHHHHHHHhhCCCCcEE--EECCCCCC
Confidence 89999999986 2235566788888888875 5544 67766653
No 86
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=98.66 E-value=5.3e-07 Score=82.35 Aligned_cols=175 Identities=16% Similarity=0.057 Sum_probs=104.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh-HHHHhhcc-ccCccee----eeeccCCHHHHhCCCCEEE
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG-VTADISHM-DTNAVVR----GFLGQQQLEDALTGMDIVI 119 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~-~~~dl~~~-~~~~~~~----~i~~t~d~~~al~~ADvVI 119 (270)
.++|.|+||+|++|++++..|+..|+ +|++++++.... ....+... .....+. .+....+++++++++|+||
T Consensus 5 ~k~vlVtG~~G~IG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 82 (325)
T PLN02989 5 GKVVCVTGASGYIASWIVKLLLFRGY--TINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVF 82 (325)
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCC--EEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEE
Confidence 46899999999999999999999998 898887765321 11111110 0001111 1222334667788999999
Q ss_pred EcCCCCCCC-C-CchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCC-CCCcHH-HH--HHHHHHhCCCC------CCC
Q 024248 120 IPAGVPRKP-G-MTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP-VNSTVP-IA--AEVFKKVGTYD------PKR 187 (270)
Q Consensus 120 i~ag~~~~~-g-~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNP-v~~~~~-i~--t~~~~~~sg~p------~~k 187 (270)
++||..... . ....+.+..|+.....+++.+.+......|+++|.- +..... .. ...+.+..-.. +..
T Consensus 83 h~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~ 162 (325)
T PLN02989 83 HTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQ 162 (325)
T ss_pred EeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhccccc
Confidence 999853211 1 122356688999999999998875322345555431 110000 00 00000110011 124
Q ss_pred eeeechhhHHHHHHHHHHHhCCCCCccc-eEEEccC
Q 024248 188 LLGVTMLDVVRANTFVAEVLGLDPREVD-VPVVGGH 222 (270)
Q Consensus 188 viG~t~ldt~r~~~~lA~~l~v~~~~v~-~~V~G~h 222 (270)
.+|.+++...++...+++..|++...++ +.|+|..
T Consensus 163 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~ 198 (325)
T PLN02989 163 WYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPI 198 (325)
T ss_pred chHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCC
Confidence 5788888888888888888898877775 5889965
No 87
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=98.65 E-value=5e-07 Score=83.20 Aligned_cols=174 Identities=13% Similarity=-0.003 Sum_probs=98.2
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCCh---hHHHHhhcc--ccCcceee----eeccCCHHHHhCC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP---GVTADISHM--DTNAVVRG----FLGQQQLEDALTG 114 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~---~~~~dl~~~--~~~~~~~~----i~~t~d~~~al~~ 114 (270)
.+.++|.|+||+|++|++++..|+.+|+ +|+++|+.... .....+... .....+.. +....+++++++.
T Consensus 4 ~~~~~vlVTGatGfiG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 81 (340)
T PLN02653 4 PPRKVALITGITGQDGSYLTEFLLSKGY--EVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDD 81 (340)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCC--EEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHH
Confidence 4457899999999999999999999998 99999886421 111111100 00011111 1112234455654
Q ss_pred --CCEEEEcCCCCCCCC--CchhhhHHhhHHHHHHHHHHHhHhCCC----CEEEEecC-CCCCcHHHHHHHHHHhCCCCC
Q 024248 115 --MDIVIIPAGVPRKPG--MTRDDLFNINAGIVKTLCEGIAKCCPK----AIVNLISN-PVNSTVPIAAEVFKKVGTYDP 185 (270)
Q Consensus 115 --ADvVIi~ag~~~~~g--~~r~~~~~~N~~i~~~i~~~i~~~~p~----a~viv~sN-Pv~~~~~i~t~~~~~~sg~p~ 185 (270)
.|+||++|+...... ......+..|+.....+++.+.+.... ..++++|. .+.... .....+...+.+
T Consensus 82 ~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~---~~~~~E~~~~~p 158 (340)
T PLN02653 82 IKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGST---PPPQSETTPFHP 158 (340)
T ss_pred cCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCC---CCCCCCCCCCCC
Confidence 699999998642211 112334577888899999999877643 24444431 111100 000001111223
Q ss_pred CCeeeechhhHHHHHHHHHHHhCCCCCcc-ceEEEccC
Q 024248 186 KRLLGVTMLDVVRANTFVAEVLGLDPREV-DVPVVGGH 222 (270)
Q Consensus 186 ~kviG~t~ldt~r~~~~lA~~l~v~~~~v-~~~V~G~h 222 (270)
...+|.++.....+...+++.+++..... ...++|.+
T Consensus 159 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~ 196 (340)
T PLN02653 159 RSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPR 196 (340)
T ss_pred CChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCC
Confidence 45678888777777778888887643322 23455543
No 88
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=98.64 E-value=1.2e-07 Score=86.18 Aligned_cols=156 Identities=17% Similarity=0.098 Sum_probs=90.2
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhC--CCCEEEEcCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALT--GMDIVIIPAGV 124 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~--~ADvVIi~ag~ 124 (270)
|||.|+||+||+|++++..|..+| +|+.+|+.... ...|+.+. ..++++++ ++|+||++|+.
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g---~V~~~~~~~~~-~~~Dl~d~------------~~~~~~~~~~~~D~Vih~Aa~ 64 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG---NLIALDVHSTD-YCGDFSNP------------EGVAETVRKIRPDVIVNAAAH 64 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC---CEEEecccccc-ccCCCCCH------------HHHHHHHHhcCCCEEEECCcc
Confidence 799999999999999999998877 57888875321 11233221 13445565 58999999875
Q ss_pred CCCCC--CchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecC-CCCCcH--HHHHHHHHHhCCCCCCCeeeechhhHHHH
Q 024248 125 PRKPG--MTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISN-PVNSTV--PIAAEVFKKVGTYDPKRLLGVTMLDVVRA 199 (270)
Q Consensus 125 ~~~~g--~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sN-Pv~~~~--~i~t~~~~~~sg~p~~kviG~t~ldt~r~ 199 (270)
..... .........|+....++++.+++.. ..++.+|. -+.... ...+ +..-..|...+|.+++...++
T Consensus 65 ~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g--~~~v~~Ss~~Vy~~~~~~p~~----E~~~~~P~~~Yg~sK~~~E~~ 138 (299)
T PRK09987 65 TAVDKAESEPEFAQLLNATSVEAIAKAANEVG--AWVVHYSTDYVFPGTGDIPWQ----ETDATAPLNVYGETKLAGEKA 138 (299)
T ss_pred CCcchhhcCHHHHHHHHHHHHHHHHHHHHHcC--CeEEEEccceEECCCCCCCcC----CCCCCCCCCHHHHHHHHHHHH
Confidence 42211 1223345689999999999998764 35555543 221000 0000 111122345577777766554
Q ss_pred HHHHHHHhCCCCCccc-eEEEccCCCCceee
Q 024248 200 NTFVAEVLGLDPREVD-VPVVGGHAGVTILP 229 (270)
Q Consensus 200 ~~~lA~~l~v~~~~v~-~~V~G~hg~~~~vp 229 (270)
... +..+..-++ ++|+|..+. .+++
T Consensus 139 ~~~----~~~~~~ilR~~~vyGp~~~-~~~~ 164 (299)
T PRK09987 139 LQE----HCAKHLIFRTSWVYAGKGN-NFAK 164 (299)
T ss_pred HHH----hCCCEEEEecceecCCCCC-CHHH
Confidence 332 222323334 488887554 3444
No 89
>CHL00194 ycf39 Ycf39; Provisional
Probab=98.64 E-value=2.5e-07 Score=84.70 Aligned_cols=108 Identities=13% Similarity=0.064 Sum_probs=72.1
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCccee-eeeccCCHHHHhCCCCEEEEcCCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVR-GFLGQQQLEDALTGMDIVIIPAGVP 125 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~-~i~~t~d~~~al~~ADvVIi~ag~~ 125 (270)
|||.|+||+|++|++++..|+++|+ +|+.++++..... .+..... ..+. .+....+++++++++|+||++++..
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~--~V~~l~R~~~~~~--~l~~~~v-~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~ 75 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGY--QVRCLVRNLRKAS--FLKEWGA-ELVYGDLSLPETLPPSFKGVTAIIDASTSR 75 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC--eEEEEEcChHHhh--hHhhcCC-EEEECCCCCHHHHHHHHCCCCEEEECCCCC
Confidence 7999999999999999999999998 9999998743211 1111100 0000 0112234678899999999987543
Q ss_pred CCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEec
Q 024248 126 RKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163 (270)
Q Consensus 126 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~s 163 (270)
.. +..++...|.....++++.+++...+ .++.+|
T Consensus 76 ~~---~~~~~~~~~~~~~~~l~~aa~~~gvk-r~I~~S 109 (317)
T CHL00194 76 PS---DLYNAKQIDWDGKLALIEAAKAAKIK-RFIFFS 109 (317)
T ss_pred CC---CccchhhhhHHHHHHHHHHHHHcCCC-EEEEec
Confidence 21 12234567888889999999886544 455554
No 90
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC. This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.
Probab=98.63 E-value=1.8e-07 Score=91.20 Aligned_cols=144 Identities=22% Similarity=0.311 Sum_probs=90.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhH-----HH----Hhhcccc------CcceeeeeccCCHH
Q 024248 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV-----TA----DISHMDT------NAVVRGFLGQQQLE 109 (270)
Q Consensus 45 ~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~-----~~----dl~~~~~------~~~~~~i~~t~d~~ 109 (270)
+..||+|||+ |.+|+.+|..++..|+ +|+++|++++... .. .+..... ...+..+..++++
T Consensus 4 ~~~kV~VIGa-G~MG~gIA~~la~aG~--~V~l~d~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~~~- 79 (503)
T TIGR02279 4 NVVTVAVIGA-GAMGAGIAQVAASAGH--QVLLYDIRAEALARAIAGIEARLNSLVTKGKLTAEECERTLKRLIPVTDL- 79 (503)
T ss_pred CccEEEEECc-CHHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccEEeCCH-
Confidence 4458999998 9999999999999999 9999999864211 00 1111100 0112223456788
Q ss_pred HHhCCCCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCee
Q 024248 110 DALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLL 189 (270)
Q Consensus 110 ~al~~ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kvi 189 (270)
+++++||+||.++ .++..+.+.++..+.+.++...+ ++||.+... ++++.... . .+.|++
T Consensus 80 ~~l~~aDlVIEav--------------~E~~~vK~~vf~~l~~~~~~~~I-lasnTStl~---i~~iA~~~-~-~p~r~~ 139 (503)
T TIGR02279 80 HALADAGLVIEAI--------------VENLEVKKALFAQLEELCPADTI-IASNTSSLS---ITAIAAGL-A-RPERVA 139 (503)
T ss_pred HHhCCCCEEEEcC--------------cCcHHHHHHHHHHHHhhCCCCeE-EEECCCCCC---HHHHHHhc-C-cccceE
Confidence 5688999999985 23466777888888888865433 478887764 33333222 1 233444
Q ss_pred ee-------------------chhhHHHHHHHHHHHhCCCCC
Q 024248 190 GV-------------------TMLDVVRANTFVAEVLGLDPR 212 (270)
Q Consensus 190 G~-------------------t~ldt~r~~~~lA~~l~v~~~ 212 (270)
|+ |.-++......+.+.+|..|-
T Consensus 140 G~HFf~Papv~~LvEvv~g~~Ts~e~~~~~~~l~~~lgk~pv 181 (503)
T TIGR02279 140 GLHFFNPAPVMALVEVVSGLATAAEVAEQLYETALAWGKQPV 181 (503)
T ss_pred EEeccCccccCceEEEeCCCCCCHHHHHHHHHHHHHcCCeee
Confidence 43 234454445666777776653
No 91
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=98.60 E-value=2.2e-07 Score=76.96 Aligned_cols=112 Identities=24% Similarity=0.328 Sum_probs=69.8
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhcccc----Cc--cee-eeeccCCHHHHhCCCCEEEE
Q 024248 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT----NA--VVR-GFLGQQQLEDALTGMDIVII 120 (270)
Q Consensus 48 KI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~----~~--~~~-~i~~t~d~~~al~~ADvVIi 120 (270)
||+|+|| |..|.++|..|+.+|+ +|.|+++++.. ..++.+... .+ .+. .+..++|+++++++||+||+
T Consensus 1 KI~ViGa-G~~G~AlA~~la~~g~--~V~l~~~~~~~--~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~~ad~Iii 75 (157)
T PF01210_consen 1 KIAVIGA-GNWGTALAALLADNGH--EVTLWGRDEEQ--IEEINETRQNPKYLPGIKLPENIKATTDLEEALEDADIIII 75 (157)
T ss_dssp EEEEESS-SHHHHHHHHHHHHCTE--EEEEETSCHHH--HHHHHHHTSETTTSTTSBEETTEEEESSHHHHHTT-SEEEE
T ss_pred CEEEECc-CHHHHHHHHHHHHcCC--EEEEEeccHHH--HHHHHHhCCCCCCCCCcccCcccccccCHHHHhCcccEEEe
Confidence 8999998 9999999999999998 99999997532 222222110 11 111 13457899999999999999
Q ss_pred cCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCC-CCEEEEecCCC-CCcHHHHHHHHHHh
Q 024248 121 PAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCP-KAIVNLISNPV-NSTVPIAAEVFKKV 180 (270)
Q Consensus 121 ~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~sNPv-~~~~~i~t~~~~~~ 180 (270)
+.. ....+++++.++.+-+ +..+++++--. ......+++++.+.
T Consensus 76 avP----------------s~~~~~~~~~l~~~l~~~~~ii~~~KG~~~~~~~~~~~~i~~~ 121 (157)
T PF01210_consen 76 AVP----------------SQAHREVLEQLAPYLKKGQIIISATKGFEPGTLLLLSEVIEEI 121 (157)
T ss_dssp -S-----------------GGGHHHHHHHHTTTSHTT-EEEETS-SEETTEEEEHHHHHHHH
T ss_pred ccc----------------HHHHHHHHHHHhhccCCCCEEEEecCCcccCCCccHHHHHHHH
Confidence 862 1224678888887764 45565554222 11112455665554
No 92
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=98.60 E-value=1e-06 Score=79.85 Aligned_cols=166 Identities=10% Similarity=0.094 Sum_probs=94.8
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCC-HHHHh-----CCCCEEEEcC
Q 024248 49 VAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQ-LEDAL-----TGMDIVIIPA 122 (270)
Q Consensus 49 I~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d-~~~al-----~~ADvVIi~a 122 (270)
|.|+||+||+|++++..|+..|+ ..+.++|..........+.+.+. .......+ +++++ .++|+||++|
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~-~~v~~~~~~~~~~~~~~~~~~~~----~d~~~~~~~~~~~~~~~~~~~~d~Vih~A 76 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGI-TDILVVDNLKDGTKFVNLVDLDI----ADYMDKEDFLAQIMAGDDFGDIEAIFHEG 76 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCC-ceEEEecCCCcchHHHhhhhhhh----hhhhhHHHHHHHHhcccccCCccEEEECc
Confidence 78999999999999999999887 24666776532111111111110 00000011 22222 3699999998
Q ss_pred CCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCC-CCCcHHHHHHHHHHhCCCCCCCeeeechhhHHHHHH
Q 024248 123 GVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP-VNSTVPIAAEVFKKVGTYDPKRLLGVTMLDVVRANT 201 (270)
Q Consensus 123 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNP-v~~~~~i~t~~~~~~sg~p~~kviG~t~ldt~r~~~ 201 (270)
+.......+...++..|+....++++.+.+... .++..|.. +.... -.....+.....+...+|.++..+.++..
T Consensus 77 ~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~--~~i~~SS~~vyg~~--~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~ 152 (308)
T PRK11150 77 ACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI--PFLYASSAATYGGR--TDDFIEEREYEKPLNVYGYSKFLFDEYVR 152 (308)
T ss_pred eecCCcCCChHHHHHHHHHHHHHHHHHHHHcCC--cEEEEcchHHhCcC--CCCCCccCCCCCCCCHHHHHHHHHHHHHH
Confidence 754322223345678899999999999987643 45554432 11000 00000011112233457777777777777
Q ss_pred HHHHHhCCCCCccc-eEEEccCC
Q 024248 202 FVAEVLGLDPREVD-VPVVGGHA 223 (270)
Q Consensus 202 ~lA~~l~v~~~~v~-~~V~G~hg 223 (270)
.+++..+++...++ +.++|.+.
T Consensus 153 ~~~~~~~~~~~~lR~~~vyG~~~ 175 (308)
T PRK11150 153 QILPEANSQICGFRYFNVYGPRE 175 (308)
T ss_pred HHHHHcCCCEEEEeeeeecCCCC
Confidence 77777788777775 58999753
No 93
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=98.60 E-value=1.5e-06 Score=79.31 Aligned_cols=175 Identities=17% Similarity=0.096 Sum_probs=101.6
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCCh-hHHHHhhcc-ccCcceee----eeccCCHHHHhCCCCEEE
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHM-DTNAVVRG----FLGQQQLEDALTGMDIVI 119 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~-~~~~dl~~~-~~~~~~~~----i~~t~d~~~al~~ADvVI 119 (270)
.++|.|+||+|++|++++..|+..|+ +|++..++... .....+... .....+.. +....+++++++++|+||
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi 82 (322)
T PLN02986 5 GKLVCVTGASGYIASWIVKLLLLRGY--TVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVF 82 (322)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEE
Confidence 45899999999999999999999998 88876665432 111222111 00011111 122234667789999999
Q ss_pred EcCCCCCCC-CCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCCC---cH-----HHHHHHHHHhCCC--CCCCe
Q 024248 120 IPAGVPRKP-GMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNS---TV-----PIAAEVFKKVGTY--DPKRL 188 (270)
Q Consensus 120 i~ag~~~~~-g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~~---~~-----~i~t~~~~~~sg~--p~~kv 188 (270)
++|+..... .....+++..|+....++++.+++...-..||++|.-... .. ..+++-.+....+ ++...
T Consensus 83 h~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~ 162 (322)
T PLN02986 83 HTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNW 162 (322)
T ss_pred EeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccccc
Confidence 999753211 1122345678999999999998764211245544422110 00 0000000000000 01244
Q ss_pred eeechhhHHHHHHHHHHHhCCCCCccc-eEEEccC
Q 024248 189 LGVTMLDVVRANTFVAEVLGLDPREVD-VPVVGGH 222 (270)
Q Consensus 189 iG~t~ldt~r~~~~lA~~l~v~~~~v~-~~V~G~h 222 (270)
++.++..+.++...+++..+++...++ +.|+|..
T Consensus 163 Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~ 197 (322)
T PLN02986 163 YPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPL 197 (322)
T ss_pred hHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCC
Confidence 677777777777778888888887775 4888863
No 94
>PLN02778 3,5-epimerase/4-reductase
Probab=98.59 E-value=3e-07 Score=83.72 Aligned_cols=143 Identities=19% Similarity=0.097 Sum_probs=87.4
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHh--CCCCEEEE
Q 024248 43 GSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDAL--TGMDIVII 120 (270)
Q Consensus 43 ~~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al--~~ADvVIi 120 (270)
+..+|||.|+||+||+|++++..|..+|+ +|++...+. .+.. .++.++ .++|+||+
T Consensus 6 ~~~~~kiLVtG~tGfiG~~l~~~L~~~g~--~V~~~~~~~--------~~~~------------~v~~~l~~~~~D~ViH 63 (298)
T PLN02778 6 GSATLKFLIYGKTGWIGGLLGKLCQEQGI--DFHYGSGRL--------ENRA------------SLEADIDAVKPTHVFN 63 (298)
T ss_pred CCCCCeEEEECCCCHHHHHHHHHHHhCCC--EEEEecCcc--------CCHH------------HHHHHHHhcCCCEEEE
Confidence 45678999999999999999999999998 887543221 1100 011222 27899999
Q ss_pred cCCCCCCCC-----CchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCCCc-H--H-----HHHHHHHHhCCCCCCC
Q 024248 121 PAGVPRKPG-----MTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNST-V--P-----IAAEVFKKVGTYDPKR 187 (270)
Q Consensus 121 ~ag~~~~~g-----~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~~~-~--~-----i~t~~~~~~sg~p~~k 187 (270)
+|+....+. ....+.+..|+....++++.+++.... ++++.|..+... . + .+++ +..-.++..
T Consensus 64 ~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~-~v~~sS~~vy~~~~~~p~~~~~~~~E---e~~p~~~~s 139 (298)
T PLN02778 64 AAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLV-LTNYATGCIFEYDDAHPLGSGIGFKE---EDTPNFTGS 139 (298)
T ss_pred CCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC-EEEEecceEeCCCCCCCcccCCCCCc---CCCCCCCCC
Confidence 998643221 234567889999999999999987543 333333222100 0 0 0010 111122335
Q ss_pred eeeechhhHHHHHHHHHHHhCCCC
Q 024248 188 LLGVTMLDVVRANTFVAEVLGLDP 211 (270)
Q Consensus 188 viG~t~ldt~r~~~~lA~~l~v~~ 211 (270)
.+|.+++...++...+++.+++.+
T Consensus 140 ~Yg~sK~~~E~~~~~y~~~~~lr~ 163 (298)
T PLN02778 140 FYSKTKAMVEELLKNYENVCTLRV 163 (298)
T ss_pred chHHHHHHHHHHHHHhhccEEeee
Confidence 678888877777776666555544
No 95
>KOG2304 consensus 3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]
Probab=98.59 E-value=3.1e-08 Score=85.90 Aligned_cols=145 Identities=18% Similarity=0.289 Sum_probs=96.9
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC---h---hHHHHhhcc------cc--------CcceeeeeccC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---P---GVTADISHM------DT--------NAVVRGFLGQQ 106 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~---~---~~~~dl~~~------~~--------~~~~~~i~~t~ 106 (270)
..|+|+|| |.+|+.+|...+..|+ .|.|+|.++. + +....+.+. +. ...+..+..++
T Consensus 12 ~~V~ivGa-G~MGSGIAQv~a~sg~--~V~l~d~~~~aL~~A~~~I~~sl~rvakKk~~~~~~~~~e~v~~~l~ri~~~t 88 (298)
T KOG2304|consen 12 KNVAIVGA-GQMGSGIAQVAATSGL--NVWLVDANEDALSRATKAISSSLKRVAKKKKADDPVALEEFVDDTLDRIKTST 88 (298)
T ss_pred cceEEEcc-cccchhHHHHHHhcCC--ceEEecCCHHHHHHHHHHHHHHHHHHHhhcccCChhhHHHHHHHHHHHHHHcC
Confidence 47999998 9999999999999999 9999999862 1 111111110 00 01122234467
Q ss_pred CHHHHhCCCCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCC
Q 024248 107 QLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPK 186 (270)
Q Consensus 107 d~~~al~~ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~ 186 (270)
|.++++.+||+||.+ +.+|+++.+++++.+.+.|+...++ .||.+... ++.++... -.+.
T Consensus 89 nv~~~v~dadliiEA--------------ivEn~diK~~lF~~l~~~ak~~~il-~tNTSSl~---lt~ia~~~--~~~s 148 (298)
T KOG2304|consen 89 NVSDAVSDADLIIEA--------------IVENLDIKRKLFKDLDKIAKSSTIL-ATNTSSLS---LTDIASAT--QRPS 148 (298)
T ss_pred CHHHhhhhhHHHHHH--------------HHHhHHHHHHHHHHHHhhcccceEE-eeccccee---HHHHHhhc--cChh
Confidence 888999999998776 3789999999999999999754332 88988763 44443221 2455
Q ss_pred Ceeee-------------------chhhHHHHHHHHHHHhCCCCCcc
Q 024248 187 RLLGV-------------------TMLDVVRANTFVAEVLGLDPREV 214 (270)
Q Consensus 187 kviG~-------------------t~ldt~r~~~~lA~~l~v~~~~v 214 (270)
|+.|+ |.-+|..+...+++.+|--|-.+
T Consensus 149 rf~GlHFfNPvPvMKLvEVir~~~TS~eTf~~l~~f~k~~gKttVac 195 (298)
T KOG2304|consen 149 RFAGLHFFNPVPVMKLVEVIRTDDTSDETFNALVDFGKAVGKTTVAC 195 (298)
T ss_pred hhceeeccCCchhHHHhhhhcCCCCCHHHHHHHHHHHHHhCCCceee
Confidence 66665 23445555566677777665544
No 96
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=98.58 E-value=1.5e-06 Score=87.57 Aligned_cols=178 Identities=13% Similarity=0.020 Sum_probs=103.8
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeec-cCC---HHHHh--CCCCE
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLG-QQQ---LEDAL--TGMDI 117 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~-t~d---~~~al--~~ADv 117 (270)
.++|||.|+||+||||++++..|+.++..-+|+.+|+.........+........+..+.. -+| +.+.+ .++|+
T Consensus 4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~ 83 (668)
T PLN02260 4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDT 83 (668)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCE
Confidence 3467999999999999999999988732228999997431111111111000111111110 112 22223 68999
Q ss_pred EEEcCCCCCCCC--CchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCC-CCCcH---HHHHHHHHHhCCCCCCCeeee
Q 024248 118 VIIPAGVPRKPG--MTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP-VNSTV---PIAAEVFKKVGTYDPKRLLGV 191 (270)
Q Consensus 118 VIi~ag~~~~~g--~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNP-v~~~~---~i~t~~~~~~sg~p~~kviG~ 191 (270)
||++|+...... ....++...|+.....+++.+++...-..+|.+|.- +.... +... ..+.....+...+|.
T Consensus 84 ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~--~~E~~~~~p~~~Y~~ 161 (668)
T PLN02260 84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVG--NHEASQLLPTNPYSA 161 (668)
T ss_pred EEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccC--ccccCCCCCCCCcHH
Confidence 999998643211 123456788999999999999876533355555531 11000 0000 001111223456778
Q ss_pred chhhHHHHHHHHHHHhCCCCCccc-eEEEccCC
Q 024248 192 TMLDVVRANTFVAEVLGLDPREVD-VPVVGGHA 223 (270)
Q Consensus 192 t~ldt~r~~~~lA~~l~v~~~~v~-~~V~G~hg 223 (270)
+++...++...+++..+++..-++ +.|+|.+.
T Consensus 162 sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~ 194 (668)
T PLN02260 162 TKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQ 194 (668)
T ss_pred HHHHHHHHHHHHHHHcCCCEEEECcccccCcCC
Confidence 888888888888888888877776 58899764
No 97
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=98.57 E-value=2e-07 Score=80.40 Aligned_cols=168 Identities=16% Similarity=0.121 Sum_probs=101.4
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCC--CEEEEcCCCCC
Q 024248 49 VAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGM--DIVIIPAGVPR 126 (270)
Q Consensus 49 I~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~A--DvVIi~ag~~~ 126 (270)
|.|+||+|++|+.++..|+.+|. +|+.+.+................... .+....++++.+++. |+||++++...
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~~-dl~~~~~~~~~~~~~~~d~vi~~a~~~~ 77 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGH--EVIVLSRSSNSESFEEKKLNVEFVIG-DLTDKEQLEKLLEKANIDVVIHLAAFSS 77 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTT--EEEEEESCSTGGHHHHHHTTEEEEES-ETTSHHHHHHHHHHHTESEEEEEBSSSS
T ss_pred EEEEccCCHHHHHHHHHHHHcCC--ccccccccccccccccccceEEEEEe-eccccccccccccccCceEEEEeecccc
Confidence 78999999999999999999999 77766665432211111100000000 011122455666666 99999997642
Q ss_pred C--CCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCC-CCCcHHHHHHHHHHhCCCCCCCeeeechhhHHHHHHHH
Q 024248 127 K--PGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP-VNSTVPIAAEVFKKVGTYDPKRLLGVTMLDVVRANTFV 203 (270)
Q Consensus 127 ~--~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNP-v~~~~~i~t~~~~~~sg~p~~kviG~t~ldt~r~~~~l 203 (270)
. ......+++..|+...+++++.+.+... ..++++|.. +.... -...+.+...+.+...++.++....++...+
T Consensus 78 ~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~~i~~sS~~~y~~~--~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~~ 154 (236)
T PF01370_consen 78 NPESFEDPEEIIEANVQGTRNLLEAAREAGV-KRFIFLSSASVYGDP--DGEPIDEDSPINPLSPYGASKRAAEELLRDY 154 (236)
T ss_dssp HHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT-SEEEEEEEGGGGTSS--SSSSBETTSGCCHSSHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccc-ccccccccccccccc--ccccccccccccccccccccccccccccccc
Confidence 0 0123456778899999999999998876 455555431 11000 0000000000111223566777777888888
Q ss_pred HHHhCCCCCccce-EEEccC
Q 024248 204 AEVLGLDPREVDV-PVVGGH 222 (270)
Q Consensus 204 A~~l~v~~~~v~~-~V~G~h 222 (270)
++..+++...++. .|+|.+
T Consensus 155 ~~~~~~~~~~~R~~~vyG~~ 174 (236)
T PF01370_consen 155 AKKYGLRVTILRPPNVYGPG 174 (236)
T ss_dssp HHHHTSEEEEEEESEEESTT
T ss_pred cccccccccccccccccccc
Confidence 8888999988865 899987
No 98
>PLN02583 cinnamoyl-CoA reductase
Probab=98.56 E-value=1.5e-06 Score=78.92 Aligned_cols=173 Identities=14% Similarity=0.038 Sum_probs=100.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhH----HHHhhccccCcceee----eeccCCHHHHhCCCCE
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV----TADISHMDTNAVVRG----FLGQQQLEDALTGMDI 117 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~----~~dl~~~~~~~~~~~----i~~t~d~~~al~~ADv 117 (270)
.++|+|+||+|++|++++..|+.+|+ +|++++++..... ..++... ...+.. +....++.+++.++|.
T Consensus 6 ~k~vlVTGatG~IG~~lv~~Ll~~G~--~V~~~~R~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~~~~~l~~~d~ 81 (297)
T PLN02583 6 SKSVCVMDASGYVGFWLVKRLLSRGY--TVHAAVQKNGETEIEKEIRGLSCE--EERLKVFDVDPLDYHSILDALKGCSG 81 (297)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCC--EEEEEEcCchhhhHHHHHHhcccC--CCceEEEEecCCCHHHHHHHHcCCCE
Confidence 34799999999999999999999999 9999887532111 1122110 011111 2222345678999999
Q ss_pred EEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCCCcH--------HHHHHHHHHhCCC--CCCC
Q 024248 118 VIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTV--------PIAAEVFKKVGTY--DPKR 187 (270)
Q Consensus 118 VIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~--------~i~t~~~~~~sg~--p~~k 187 (270)
|+.+++..........+++..|+.....+++.+.+...-..||++|.-..... ..+.+--+....+ ++..
T Consensus 82 v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~ 161 (297)
T PLN02583 82 LFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKL 161 (297)
T ss_pred EEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhccc
Confidence 99876543221112345678999999999999987531234554442211000 0000000000000 0011
Q ss_pred eeeechhhHHHHHHHHHHHhCCCCCccc-eEEEccC
Q 024248 188 LLGVTMLDVVRANTFVAEVLGLDPREVD-VPVVGGH 222 (270)
Q Consensus 188 viG~t~ldt~r~~~~lA~~l~v~~~~v~-~~V~G~h 222 (270)
.++.++....++...+++..|++...++ +.|+|..
T Consensus 162 ~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~ 197 (297)
T PLN02583 162 WHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPS 197 (297)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCC
Confidence 3666777777777777777788877775 4788865
No 99
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=98.55 E-value=5.1e-07 Score=81.93 Aligned_cols=102 Identities=14% Similarity=0.221 Sum_probs=66.5
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh-HHHH--------hh---ccccC------cceeeeeccCCH
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG-VTAD--------IS---HMDTN------AVVRGFLGQQQL 108 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~-~~~d--------l~---~~~~~------~~~~~i~~t~d~ 108 (270)
.||+|||+ |.+|..++..++..|+ +|+++|+++... ...+ +. +.... .....+..++++
T Consensus 4 ~~I~ViGa-G~mG~~iA~~la~~G~--~V~l~d~~~~~l~~~~~~i~~~~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~ 80 (291)
T PRK06035 4 KVIGVVGS-GVMGQGIAQVFARTGY--DVTIVDVSEEILKNAMELIESGPYGLRNLVEKGKMSEDEAKAIMARIRTSTSY 80 (291)
T ss_pred cEEEEECc-cHHHHHHHHHHHhcCC--eEEEEeCCHHHHHHHHHHHHhhhhhHHHHHHcCCCCHHHHHHHHhCcEeeCCH
Confidence 38999998 9999999999999999 999999986321 1111 11 10000 001112345677
Q ss_pred HHHhCCCCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCC-CCEEEEecCCCCC
Q 024248 109 EDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCP-KAIVNLISNPVNS 168 (270)
Q Consensus 109 ~~al~~ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~sNPv~~ 168 (270)
+++++||+||+++. ++.+..+++++.+.+.++ ++++ +||....
T Consensus 81 -~~~~~aDlVieav~--------------e~~~~k~~~~~~l~~~~~~~~il--~S~tsg~ 124 (291)
T PRK06035 81 -ESLSDADFIVEAVP--------------EKLDLKRKVFAELERNVSPETII--ASNTSGI 124 (291)
T ss_pred -HHhCCCCEEEEcCc--------------CcHHHHHHHHHHHHhhCCCCeEE--EEcCCCC
Confidence 67899999999862 124556777778888775 5544 5666554
No 100
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.54 E-value=6.7e-07 Score=81.04 Aligned_cols=103 Identities=20% Similarity=0.255 Sum_probs=65.5
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhH-----HHHhhcc-----ccC-----cceeeeeccCCHHHH
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV-----TADISHM-----DTN-----AVVRGFLGQQQLEDA 111 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~-----~~dl~~~-----~~~-----~~~~~i~~t~d~~~a 111 (270)
.||+|||+ |.+|..+|..|+..|+ +|+++|++++... ..++... ... .....+..+++++++
T Consensus 2 ~~V~VIG~-G~mG~~iA~~la~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 78 (288)
T PRK09260 2 EKLVVVGA-GVMGRGIAYVFAVSGF--QTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLDLKAA 78 (288)
T ss_pred cEEEEECc-cHHHHHHHHHHHhCCC--cEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCcHHHh
Confidence 38999998 9999999999999999 9999999863111 0111100 000 001113345688889
Q ss_pred hCCCCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCC-CCEEEEecCCCCC
Q 024248 112 LTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCP-KAIVNLISNPVNS 168 (270)
Q Consensus 112 l~~ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~sNPv~~ 168 (270)
+++||+||.+... +....+.++..+.++++ ++++ ++|.+..
T Consensus 79 ~~~aD~Vi~avpe--------------~~~~k~~~~~~l~~~~~~~~il--~~~tSt~ 120 (288)
T PRK09260 79 VADADLVIEAVPE--------------KLELKKAVFETADAHAPAECYI--ATNTSTM 120 (288)
T ss_pred hcCCCEEEEeccC--------------CHHHHHHHHHHHHhhCCCCcEE--EEcCCCC
Confidence 9999999998621 23444566666777764 5544 4454443
No 101
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.54 E-value=6.4e-07 Score=81.27 Aligned_cols=102 Identities=22% Similarity=0.301 Sum_probs=64.4
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh-HHH-----Hhh----ccccC-----cceeeeeccCCHHHH
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG-VTA-----DIS----HMDTN-----AVVRGFLGQQQLEDA 111 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~-~~~-----dl~----~~~~~-----~~~~~i~~t~d~~~a 111 (270)
+||+|||+ |.+|..++..++..|+ +|+++|++++.. ... .+. ..... ..+..+..++++ ++
T Consensus 5 ~kI~vIGa-G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 80 (292)
T PRK07530 5 KKVGVIGA-GQMGNGIAHVCALAGY--DVLLNDVSADRLEAGLATINGNLARQVAKGKISEEARAAALARISTATDL-ED 80 (292)
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEeeCCH-HH
Confidence 58999998 9999999999999999 999999986311 100 010 01000 001113345677 56
Q ss_pred hCCCCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhC-CCCEEEEecCCCCC
Q 024248 112 LTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNS 168 (270)
Q Consensus 112 l~~ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~sNPv~~ 168 (270)
+++||+||++... +....+.+++.+.+.+ |++++ +||.+..
T Consensus 81 ~~~aD~Vieavpe--------------~~~~k~~~~~~l~~~~~~~~ii--~s~ts~~ 122 (292)
T PRK07530 81 LADCDLVIEAATE--------------DETVKRKIFAQLCPVLKPEAIL--ATNTSSI 122 (292)
T ss_pred hcCCCEEEEcCcC--------------CHHHHHHHHHHHHhhCCCCcEE--EEcCCCC
Confidence 8999999998621 1234455666777766 45654 4566554
No 102
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated
Probab=98.54 E-value=4e-07 Score=88.93 Aligned_cols=141 Identities=21% Similarity=0.271 Sum_probs=87.3
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCCh---h--HHHH----hhcccc------CcceeeeeccCCHHHH
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP---G--VTAD----ISHMDT------NAVVRGFLGQQQLEDA 111 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~---~--~~~d----l~~~~~------~~~~~~i~~t~d~~~a 111 (270)
.||+|||+ |.+|..+|..++..|+ +|+++|++++. + ...+ +..... ...+..+..++++ ++
T Consensus 8 ~~V~VIGa-G~MG~gIA~~la~aG~--~V~l~D~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~~~-~~ 83 (507)
T PRK08268 8 ATVAVIGA-GAMGAGIAQVAAQAGH--TVLLYDARAGAAAAARDGIAARLAKLVEKGKLTAEQADAALARLRPVEAL-AD 83 (507)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCCH-HH
Confidence 48999998 9999999999999999 99999998641 1 1111 111100 0111223446677 56
Q ss_pred hCCCCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhC-CCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeee
Q 024248 112 LTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLG 190 (270)
Q Consensus 112 l~~ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG 190 (270)
+++||+||.++ .++.++.+.+...+.+.+ |++++ +||.+.+. ++++... .. .++|++|
T Consensus 84 ~~~aDlViEav--------------~E~~~vK~~vf~~l~~~~~~~ail--asntStl~---i~~la~~-~~-~p~r~~G 142 (507)
T PRK08268 84 LADCDLVVEAI--------------VERLDVKQALFAQLEAIVSPDCIL--ATNTSSLS---ITAIAAA-LK-HPERVAG 142 (507)
T ss_pred hCCCCEEEEcC--------------cccHHHHHHHHHHHHhhCCCCcEE--EECCCCCC---HHHHHhh-cC-CcccEEE
Confidence 88999999985 234666777878888887 45554 56766653 2333322 22 2455555
Q ss_pred e-------------------chhhHHHHHHHHHHHhCCCCC
Q 024248 191 V-------------------TMLDVVRANTFVAEVLGLDPR 212 (270)
Q Consensus 191 ~-------------------t~ldt~r~~~~lA~~l~v~~~ 212 (270)
+ |.-++......+.+.+|..|-
T Consensus 143 ~hff~Pa~v~~LvEvv~g~~Ts~~~~~~~~~l~~~lgk~pv 183 (507)
T PRK08268 143 LHFFNPVPLMKLVEVVSGLATDPAVADALYALARAWGKTPV 183 (507)
T ss_pred EeecCCcccCeeEEEeCCCCCCHHHHHHHHHHHHHcCCceE
Confidence 4 223444444566777776553
No 103
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=98.51 E-value=2.2e-06 Score=78.48 Aligned_cols=171 Identities=19% Similarity=0.170 Sum_probs=93.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC-hh-HHHHhhcc-ccCcc-ee-eeeccCCHHHHhC--CCCEEE
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PG-VTADISHM-DTNAV-VR-GFLGQQQLEDALT--GMDIVI 119 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~-~~-~~~dl~~~-~~~~~-~~-~i~~t~d~~~al~--~ADvVI 119 (270)
|||.|+||+|++|++++..|+..|+ +|+++|+... .. ....+.+. ..... +. .+.....+.++++ ++|+||
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vv 78 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGH--DVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVI 78 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCC--eEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEE
Confidence 7999999999999999999999998 9999986532 11 11111111 00011 10 0111112344454 689999
Q ss_pred EcCCCCCCC--CCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCC-CCCcHHHHHHHHHHhCCC-CCCCeeeechhh
Q 024248 120 IPAGVPRKP--GMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP-VNSTVPIAAEVFKKVGTY-DPKRLLGVTMLD 195 (270)
Q Consensus 120 i~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNP-v~~~~~i~t~~~~~~sg~-p~~kviG~t~ld 195 (270)
++++..... .....+.+..|+.....+++.+++.... .++++|.- +.....- . .+.+.... .+.-.+|.++..
T Consensus 79 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~Ss~~~yg~~~~-~-~~~E~~~~~~p~~~Y~~sK~~ 155 (338)
T PRK10675 79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK-NLIFSSSATVYGDQPK-I-PYVESFPTGTPQSPYGKSKLM 155 (338)
T ss_pred ECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCC-EEEEeccHHhhCCCCC-C-ccccccCCCCCCChhHHHHHH
Confidence 998754211 1123467788999999999998876433 45545431 1100000 0 00000001 122345666777
Q ss_pred HHHHHHHHHHHh-CCCCCccc-eEEEccC
Q 024248 196 VVRANTFVAEVL-GLDPREVD-VPVVGGH 222 (270)
Q Consensus 196 t~r~~~~lA~~l-~v~~~~v~-~~V~G~h 222 (270)
..++...+++.. +++..-++ +.++|.|
T Consensus 156 ~E~~~~~~~~~~~~~~~~ilR~~~v~g~~ 184 (338)
T PRK10675 156 VEQILTDLQKAQPDWSIALLRYFNPVGAH 184 (338)
T ss_pred HHHHHHHHHHhcCCCcEEEEEeeeecCCC
Confidence 666666666543 55544444 3666655
No 104
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=98.51 E-value=2.9e-06 Score=80.75 Aligned_cols=122 Identities=25% Similarity=0.297 Sum_probs=75.4
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhcccc---Ccc----------eeeeeccCCHHHHhC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT---NAV----------VRGFLGQQQLEDALT 113 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~---~~~----------~~~i~~t~d~~~al~ 113 (270)
|||+|||. |++|..+|..|+..|+ +|+++|+++.. ..++..... .+. ...+..+++++++++
T Consensus 1 mkI~vIGl-G~~G~~lA~~La~~G~--~V~~~d~~~~~--v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~ 75 (411)
T TIGR03026 1 MKIAVIGL-GYVGLPLAALLADLGH--EVTGVDIDQEK--VDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIR 75 (411)
T ss_pred CEEEEECC-CchhHHHHHHHHhcCC--eEEEEECCHHH--HHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHh
Confidence 69999997 9999999999999999 99999997542 122221100 000 001234567878899
Q ss_pred CCCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhC-CCCEEEEec-CCCCCcHHHHHHHHHH
Q 024248 114 GMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLIS-NPVNSTVPIAAEVFKK 179 (270)
Q Consensus 114 ~ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~s-NPv~~~~~i~t~~~~~ 179 (270)
+||+||++.+.+..... .-++..+.+.++.+.+.. ++.++++.| -|....-.+...++.+
T Consensus 76 ~advvii~vpt~~~~~~------~~d~~~v~~~~~~i~~~l~~g~lvi~~STv~pgt~~~l~~~~~~~ 137 (411)
T TIGR03026 76 DADVIIICVPTPLKEDG------SPDLSYVESAAETIAKHLRKGATVVLESTVPPGTTEEVVKPILER 137 (411)
T ss_pred hCCEEEEEeCCCCCCCC------CcChHHHHHHHHHHHHhcCCCCEEEEeCcCCCCchHHHHHHHHHh
Confidence 99999999987754321 123455566666666554 455555554 4444332333344333
No 105
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=98.50 E-value=9.1e-07 Score=81.01 Aligned_cols=103 Identities=23% Similarity=0.297 Sum_probs=66.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhH-HH--------Hhhcccc------CcceeeeeccCCHHHH
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV-TA--------DISHMDT------NAVVRGFLGQQQLEDA 111 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~-~~--------dl~~~~~------~~~~~~i~~t~d~~~a 111 (270)
|||+|||+ |.+|+.++..|+..|+ +|+++|+++.... .. .+..... ......+..+++++++
T Consensus 3 ~~V~VIG~-G~mG~~iA~~la~~G~--~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~~~~~~~a 79 (308)
T PRK06129 3 GSVAIIGA-GLIGRAWAIVFARAGH--EVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRVTDSLADA 79 (308)
T ss_pred cEEEEECc-cHHHHHHHHHHHHCCC--eeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEEECcHHHh
Confidence 58999997 9999999999999999 9999999863111 00 1111110 0011112346688888
Q ss_pred hCCCCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCC
Q 024248 112 LTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVN 167 (270)
Q Consensus 112 l~~ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~ 167 (270)
+++||+|+.+.. ++....+.++..+.+..++..++ .||...
T Consensus 80 ~~~ad~Vi~avp--------------e~~~~k~~~~~~l~~~~~~~~ii-~ssts~ 120 (308)
T PRK06129 80 VADADYVQESAP--------------ENLELKRALFAELDALAPPHAIL-ASSTSA 120 (308)
T ss_pred hCCCCEEEECCc--------------CCHHHHHHHHHHHHHhCCCcceE-EEeCCC
Confidence 999999999861 11334455666677666655444 465544
No 106
>PRK15057 UDP-glucose 6-dehydrogenase; Provisional
Probab=98.49 E-value=1.9e-06 Score=81.56 Aligned_cols=110 Identities=19% Similarity=0.285 Sum_probs=68.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhcccc------------CcceeeeeccCCHHHHhCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT------------NAVVRGFLGQQQLEDALTG 114 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~------------~~~~~~i~~t~d~~~al~~ 114 (270)
|||+|||+ |+||..+|..++. |+ +|+++|+++.+ +..+..... .... .+..+.+.++++++
T Consensus 1 mkI~VIGl-GyvGl~~A~~lA~-G~--~VigvD~d~~k--v~~l~~g~~~~~e~~l~~~l~~~~~-~l~~t~~~~~~~~~ 73 (388)
T PRK15057 1 MKITISGT-GYVGLSNGLLIAQ-NH--EVVALDILPSR--VAMLNDRISPIVDKEIQQFLQSDKI-HFNATLDKNEAYRD 73 (388)
T ss_pred CEEEEECC-CHHHHHHHHHHHh-CC--cEEEEECCHHH--HHHHHcCCCCCCCcCHHHHHHhCCC-cEEEecchhhhhcC
Confidence 79999997 9999999987775 88 99999998642 111111100 0011 13345567788899
Q ss_pred CCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEec-CCCCC
Q 024248 115 MDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS-NPVNS 168 (270)
Q Consensus 115 ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~s-NPv~~ 168 (270)
||+||++.+.+...... .-++..+.++++.+.+..++.++++-| -|...
T Consensus 74 ad~vii~Vpt~~~~k~~-----~~dl~~v~~v~~~i~~~~~g~lVV~~STv~pgt 123 (388)
T PRK15057 74 ADYVIIATPTDYDPKTN-----YFNTSSVESVIKDVVEINPYAVMVIKSTVPVGF 123 (388)
T ss_pred CCEEEEeCCCCCccCCC-----CcChHHHHHHHHHHHhcCCCCEEEEeeecCCch
Confidence 99999998776322111 123455566666666544556555544 56654
No 107
>PLN02686 cinnamoyl-CoA reductase
Probab=98.47 E-value=4.4e-06 Score=78.28 Aligned_cols=177 Identities=14% Similarity=0.100 Sum_probs=102.5
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh-HHHHhhcc---c-cCcceee----eeccCCHHHHhC
Q 024248 43 GSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG-VTADISHM---D-TNAVVRG----FLGQQQLEDALT 113 (270)
Q Consensus 43 ~~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~-~~~dl~~~---~-~~~~~~~----i~~t~d~~~al~ 113 (270)
..+.++|+|+||+||+|++++..|+.+|+ +|+++.++.... ...++... . ....+.. +....++.++++
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~--~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~ 127 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRHGY--SVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD 127 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHH
Confidence 34457899999999999999999999998 998766653211 11122100 0 0001111 111223566788
Q ss_pred CCCEEEEcCCCCCCCCC--chhhhHHhhHHHHHHHHHHHhHh-CCCCEEEEecCC---CCCc------HHHHHHHHHH--
Q 024248 114 GMDIVIIPAGVPRKPGM--TRDDLFNINAGIVKTLCEGIAKC-CPKAIVNLISNP---VNST------VPIAAEVFKK-- 179 (270)
Q Consensus 114 ~ADvVIi~ag~~~~~g~--~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~sNP---v~~~------~~i~t~~~~~-- 179 (270)
++|.||++++.....+. ....+...|+....++++.+.+. ..+ .++++|.. +... ..++.+-.+.
T Consensus 128 ~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~-r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~ 206 (367)
T PLN02686 128 GCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVR-KCVFTSSLLACVWRQNYPHDLPPVIDEESWSDE 206 (367)
T ss_pred hccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCcc-EEEEeccHHHhcccccCCCCCCcccCCCCCCCh
Confidence 99999998875322221 11244567899999999998875 233 34444432 1100 0001100000
Q ss_pred hCCCCCCCeeeechhhHHHHHHHHHHHhCCCCCccc-eEEEccC
Q 024248 180 VGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVD-VPVVGGH 222 (270)
Q Consensus 180 ~sg~p~~kviG~t~ldt~r~~~~lA~~l~v~~~~v~-~~V~G~h 222 (270)
..-.++...+|.+++...++...+++..|++...++ +.|+|+.
T Consensus 207 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~ 250 (367)
T PLN02686 207 SFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPG 250 (367)
T ss_pred hhcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCC
Confidence 000011224677888888888888888898887775 5899974
No 108
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=98.44 E-value=2.1e-06 Score=83.77 Aligned_cols=105 Identities=13% Similarity=0.084 Sum_probs=68.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHH-HH--------hhc--cccCcceeeeeccCCHHHHhCC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVT-AD--------ISH--MDTNAVVRGFLGQQQLEDALTG 114 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~-~d--------l~~--~~~~~~~~~i~~t~d~~~al~~ 114 (270)
-|||+|||+ |.+|+.+|..|+..|+ +|+++|+++..... .+ +.. .........+..++++++++++
T Consensus 4 i~kIavIG~-G~MG~~iA~~la~~G~--~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~~ea~~~ 80 (495)
T PRK07531 4 IMKAACIGG-GVIGGGWAARFLLAGI--DVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASLAEAVAG 80 (495)
T ss_pred cCEEEEECc-CHHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCHHHHhcC
Confidence 369999998 9999999999999999 99999998642111 11 000 0000000112345688889999
Q ss_pred CCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCCC
Q 024248 115 MDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNS 168 (270)
Q Consensus 115 ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~~ 168 (270)
||+||.++. ++.++.+.+...+.+.+++.. ++.||.+..
T Consensus 81 aD~Vieavp--------------e~~~vk~~l~~~l~~~~~~~~-iI~SsTsgi 119 (495)
T PRK07531 81 ADWIQESVP--------------ERLDLKRRVLAEIDAAARPDA-LIGSSTSGF 119 (495)
T ss_pred CCEEEEcCc--------------CCHHHHHHHHHHHHhhCCCCc-EEEEcCCCC
Confidence 999999851 224455666667777775443 346776665
No 109
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=98.42 E-value=1.9e-06 Score=78.34 Aligned_cols=102 Identities=25% Similarity=0.317 Sum_probs=64.9
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh-HH--------HHhhcccc------CcceeeeeccCCHHHH
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG-VT--------ADISHMDT------NAVVRGFLGQQQLEDA 111 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~-~~--------~dl~~~~~------~~~~~~i~~t~d~~~a 111 (270)
.||+|||+ |.+|..+|..++..|+ +|+++|+++... .. .++..... ...+..+..++++ ++
T Consensus 5 ~~V~vIG~-G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~ 80 (295)
T PLN02545 5 KKVGVVGA-GQMGSGIAQLAAAAGM--DVWLLDSDPAALSRGLDSISSSLARLVKKGKMSQEEADATLGRIRCTTNL-EE 80 (295)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceEeeCCH-HH
Confidence 48999998 9999999999999998 999999976321 10 11211100 0011112334566 67
Q ss_pred hCCCCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhC-CCCEEEEecCCCCC
Q 024248 112 LTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNS 168 (270)
Q Consensus 112 l~~ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~sNPv~~ 168 (270)
+++||+||.++ .++.+....+...+.+.. |+++| +||.+..
T Consensus 81 ~~~aD~Vieav--------------~e~~~~k~~v~~~l~~~~~~~~il--~s~tS~i 122 (295)
T PLN02545 81 LRDADFIIEAI--------------VESEDLKKKLFSELDRICKPSAIL--ASNTSSI 122 (295)
T ss_pred hCCCCEEEEcC--------------ccCHHHHHHHHHHHHhhCCCCcEE--EECCCCC
Confidence 89999999986 122445566667777766 45544 4666554
No 110
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.42 E-value=3.3e-06 Score=77.18 Aligned_cols=103 Identities=20% Similarity=0.246 Sum_probs=64.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhH-HH-------HhhccccC--cceeeeeccCCHHHHhCCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV-TA-------DISHMDTN--AVVRGFLGQQQLEDALTGMD 116 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~-~~-------dl~~~~~~--~~~~~i~~t~d~~~al~~AD 116 (270)
+||+|||+ |.+|+.++..|+..|+ +|+++|+++.... .. +....... .....+..++++++++++||
T Consensus 5 ~~I~vIGa-G~mG~~iA~~l~~~g~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~aD 81 (311)
T PRK06130 5 QNLAIIGA-GTMGSGIAALFARKGL--QVVLIDVMEGALERARGVIERALGVYAPLGIASAGMGRIRMEAGLAAAVSGAD 81 (311)
T ss_pred cEEEEECC-CHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHHHHHHhhhcccHHHHhhceEEeCCHHHHhccCC
Confidence 48999998 9999999999999998 9999999763211 11 11000000 00111234567877899999
Q ss_pred EEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCC-CCEEEEecCCCCC
Q 024248 117 IVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCP-KAIVNLISNPVNS 168 (270)
Q Consensus 117 vVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~sNPv~~ 168 (270)
+||++... ......+++..+...++ +++| +||.+..
T Consensus 82 lVi~av~~--------------~~~~~~~v~~~l~~~~~~~~ii--~s~tsg~ 118 (311)
T PRK06130 82 LVIEAVPE--------------KLELKRDVFARLDGLCDPDTIF--ATNTSGL 118 (311)
T ss_pred EEEEeccC--------------cHHHHHHHHHHHHHhCCCCcEE--EECCCCC
Confidence 99998621 12334556666666654 4443 4555554
No 111
>PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional
Probab=98.41 E-value=6e-06 Score=79.09 Aligned_cols=124 Identities=15% Similarity=0.159 Sum_probs=74.6
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhcccc---Cc------ceeeeeccCCHHHHhC
Q 024248 43 GSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT---NA------VVRGFLGQQQLEDALT 113 (270)
Q Consensus 43 ~~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~---~~------~~~~i~~t~d~~~al~ 113 (270)
++++|||+|||. |+||..+|..|+. ++ +|+.||+++.+ +..|..... .+ ....+..+++. ++++
T Consensus 3 ~~~~mkI~vIGl-GyvGlpmA~~la~-~~--~V~g~D~~~~~--ve~l~~G~~~~~e~~~~~l~~~g~l~~t~~~-~~~~ 75 (425)
T PRK15182 3 GIDEVKIAIIGL-GYVGLPLAVEFGK-SR--QVVGFDVNKKR--ILELKNGVDVNLETTEEELREARYLKFTSEI-EKIK 75 (425)
T ss_pred CCCCCeEEEECc-CcchHHHHHHHhc-CC--EEEEEeCCHHH--HHHHHCcCCCCCCCCHHHHHhhCCeeEEeCH-HHHc
Confidence 456799999997 9999999999877 57 99999998642 223332211 00 00012345566 5789
Q ss_pred CCCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhC-CCCEEEEe-cCCCCCcHHHHHHHHHH
Q 024248 114 GMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLI-SNPVNSTVPIAAEVFKK 179 (270)
Q Consensus 114 ~ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~-sNPv~~~~~i~t~~~~~ 179 (270)
+||++|++.++|.+... ..++..+....+.+.++. ++.++|+- |-|....-.++...+.+
T Consensus 76 ~advvii~Vptp~~~~~------~~dl~~v~~a~~~i~~~l~~g~lVI~~STv~pgtt~~~~~~~l~~ 137 (425)
T PRK15182 76 ECNFYIITVPTPINTYK------QPDLTPLIKASETVGTVLNRGDIVVYESTVYPGCTEEECVPILAR 137 (425)
T ss_pred CCCEEEEEcCCCCCCCC------CcchHHHHHHHHHHHHhcCCCCEEEEecCCCCcchHHHHHHHHHh
Confidence 99999999998854321 122444455555665554 44555554 45555432233344443
No 112
>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=98.38 E-value=8.6e-06 Score=74.85 Aligned_cols=112 Identities=23% Similarity=0.397 Sum_probs=74.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccC----cc--ee-eeeccCCHHHHhCCCCEE
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTN----AV--VR-GFLGQQQLEDALTGMDIV 118 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~----~~--~~-~i~~t~d~~~al~~ADvV 118 (270)
.|||+|+|+ |.-|+++|..|+++++ +|+++.++++ .+.++.....+ +. +. .+..++|+++++++||+|
T Consensus 1 ~~kI~ViGa-GswGTALA~~la~ng~--~V~lw~r~~~--~~~~i~~~~~N~~yLp~i~lp~~l~at~Dl~~a~~~ad~i 75 (329)
T COG0240 1 MMKIAVIGA-GSWGTALAKVLARNGH--EVRLWGRDEE--IVAEINETRENPKYLPGILLPPNLKATTDLAEALDGADII 75 (329)
T ss_pred CceEEEEcC-ChHHHHHHHHHHhcCC--eeEEEecCHH--HHHHHHhcCcCccccCCccCCcccccccCHHHHHhcCCEE
Confidence 379999998 9999999999999998 9999999754 22333322111 11 11 145688999999999999
Q ss_pred EEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhC-CCCEEEEecC---CCCCcHHHHHHHHHHh
Q 024248 119 IIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISN---PVNSTVPIAAEVFKKV 180 (270)
Q Consensus 119 Ii~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~sN---Pv~~~~~i~t~~~~~~ 180 (270)
|++. | ...++++++.+...- ++.+++.+|- |... ..+++++++.
T Consensus 76 v~av--P--------------s~~~r~v~~~l~~~l~~~~~iv~~sKGie~~t~--~l~seii~e~ 123 (329)
T COG0240 76 VIAV--P--------------SQALREVLRQLKPLLLKDAIIVSATKGLEPETG--RLLSEIIEEE 123 (329)
T ss_pred EEEC--C--------------hHHHHHHHHHHhhhccCCCeEEEEeccccCCCc--chHHHHHHHH
Confidence 9986 2 233455555554332 4566666662 3222 3566666665
No 113
>PRK06194 hypothetical protein; Provisional
Probab=98.35 E-value=1e-05 Score=72.44 Aligned_cols=158 Identities=18% Similarity=0.132 Sum_probs=91.1
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCCh--hHHHHhhccccCcceee----eeccCCHHHHhC-------
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTNAVVRG----FLGQQQLEDALT------- 113 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~--~~~~dl~~~~~~~~~~~----i~~t~d~~~al~------- 113 (270)
++|.|+||+|++|++++..|+.+|. +|+++|++... ....++... ...+.. +....+++++++
T Consensus 7 k~vlVtGasggIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~~~~~g 82 (287)
T PRK06194 7 KVAVITGAASGFGLAFARIGAALGM--KLVLADVQQDALDRAVAELRAQ--GAEVLGVRTDVSDAAQVEALADAALERFG 82 (287)
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 5799999999999999999999998 99999987532 112223221 111111 111112333333
Q ss_pred CCCEEEEcCCCCCCC---CCc---hhhhHHhhHHHHHHHHHH----HhHhCCC-----CEEEEecCCCCCcHHHHHHHHH
Q 024248 114 GMDIVIIPAGVPRKP---GMT---RDDLFNINAGIVKTLCEG----IAKCCPK-----AIVNLISNPVNSTVPIAAEVFK 178 (270)
Q Consensus 114 ~ADvVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~----i~~~~p~-----a~viv~sNPv~~~~~i~t~~~~ 178 (270)
..|+||+++|..... ..+ ....+..|+.....+++. +.+.+.+ +.++++|.....
T Consensus 83 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~---------- 152 (287)
T PRK06194 83 AVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGL---------- 152 (287)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhc----------
Confidence 479999999875321 111 122355666655554444 5544332 456655532221
Q ss_pred HhCCCCCCCeeeechhhHHHHHHHHHHHhCCCCCccceEEEc
Q 024248 179 KVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (270)
Q Consensus 179 ~~sg~p~~kviG~t~ldt~r~~~~lA~~l~v~~~~v~~~V~G 220 (270)
.+.|..-.++.++.....+.+.++..++.....+++.++.
T Consensus 153 --~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~ 192 (287)
T PRK06194 153 --LAPPAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLC 192 (287)
T ss_pred --cCCCCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEE
Confidence 1233344567776666677788888887766666655544
No 114
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=98.34 E-value=3.1e-06 Score=70.70 Aligned_cols=93 Identities=27% Similarity=0.298 Sum_probs=65.6
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeee----eccCCHHHHhCCCCEEEEcCCC
Q 024248 49 VAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGF----LGQQQLEDALTGMDIVIIPAGV 124 (270)
Q Consensus 49 I~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i----~~t~d~~~al~~ADvVIi~ag~ 124 (270)
|+|+||+|++|..++..|+++++ +|+++-+++.+.. + . ..+..+ ...+++.++++++|.||.++|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~--~V~~~~R~~~~~~--~--~----~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~ 70 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH--EVTALVRSPSKAE--D--S----PGVEIIQGDLFDPDSVKAALKGADAVIHAAGP 70 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS--EEEEEESSGGGHH--H--C----TTEEEEESCTTCHHHHHHHHTTSSEEEECCHS
T ss_pred eEEECCCChHHHHHHHHHHHCCC--EEEEEecCchhcc--c--c----cccccceeeehhhhhhhhhhhhcchhhhhhhh
Confidence 78999999999999999999998 9999998754222 1 1 111111 1122467889999999999976
Q ss_pred CCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEec
Q 024248 125 PRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163 (270)
Q Consensus 125 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~s 163 (270)
+.+ +.+.++.+++.+++.... .++++|
T Consensus 71 ~~~-----------~~~~~~~~~~a~~~~~~~-~~v~~s 97 (183)
T PF13460_consen 71 PPK-----------DVDAAKNIIEAAKKAGVK-RVVYLS 97 (183)
T ss_dssp TTT-----------HHHHHHHHHHHHHHTTSS-EEEEEE
T ss_pred hcc-----------cccccccccccccccccc-cceeee
Confidence 533 167778899998876533 455454
No 115
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=98.34 E-value=2.3e-06 Score=76.26 Aligned_cols=98 Identities=19% Similarity=0.251 Sum_probs=67.6
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCCCCCCC
Q 024248 49 VAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKP 128 (270)
Q Consensus 49 I~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag~~~~~ 128 (270)
|.|+||+|++|++++..|+..|+ +|+.++++....... ... .+..+.. ....++++++|+||++++.+...
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~--~~~----~~~~~~~-~~~~~~~~~~D~Vvh~a~~~~~~ 71 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGH--EVTILTRSPPAGANT--KWE----GYKPWAP-LAESEALEGADAVINLAGEPIAD 71 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCC--EEEEEeCCCCCCCcc--cce----eeecccc-cchhhhcCCCCEEEECCCCCccc
Confidence 57999999999999999999998 999999976421110 000 0000111 23456789999999999865321
Q ss_pred C-C---chhhhHHhhHHHHHHHHHHHhHhCC
Q 024248 129 G-M---TRDDLFNINAGIVKTLCEGIAKCCP 155 (270)
Q Consensus 129 g-~---~r~~~~~~N~~i~~~i~~~i~~~~p 155 (270)
+ . ...++...|+...+.+++.+++...
T Consensus 72 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~ 102 (292)
T TIGR01777 72 KRWTEERKQEIRDSRIDTTRALVEAIAAAEQ 102 (292)
T ss_pred ccCCHHHHHHHHhcccHHHHHHHHHHHhcCC
Confidence 1 1 1235667899999999999988754
No 116
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=98.30 E-value=5.2e-06 Score=70.18 Aligned_cols=105 Identities=17% Similarity=0.197 Sum_probs=68.9
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHH-HH--hhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVT-AD--ISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~-~d--l~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
|||+||||+|.+|+.++..+..+|+ ||+.+-+++.+-.+ .+ +.+.+ +...+.+.+++.+-|+||.+.|
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGH--eVTAivRn~~K~~~~~~~~i~q~D-------ifd~~~~a~~l~g~DaVIsA~~ 71 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGH--EVTAIVRNASKLAARQGVTILQKD-------IFDLTSLASDLAGHDAVISAFG 71 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCC--eeEEEEeChHhccccccceeeccc-------ccChhhhHhhhcCCceEEEecc
Confidence 8999999999999999999999999 99999988642211 11 11221 2223345678999999999987
Q ss_pred CCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCC
Q 024248 124 VPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVN 167 (270)
Q Consensus 124 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~ 167 (270)
.+. ++.. .+. .+....+.+.++. +-...+++++....
T Consensus 72 ~~~-~~~~--~~~---~k~~~~li~~l~~-agv~RllVVGGAGS 108 (211)
T COG2910 72 AGA-SDND--ELH---SKSIEALIEALKG-AGVPRLLVVGGAGS 108 (211)
T ss_pred CCC-CChh--HHH---HHHHHHHHHHHhh-cCCeeEEEEcCccc
Confidence 653 2221 111 2234555555554 23567888876443
No 117
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=98.29 E-value=6e-06 Score=74.29 Aligned_cols=154 Identities=12% Similarity=0.074 Sum_probs=91.9
Q ss_pred EEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhC--CCCEEEEcCCCCCC
Q 024248 50 AVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALT--GMDIVIIPAGVPRK 127 (270)
Q Consensus 50 ~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~--~ADvVIi~ag~~~~ 127 (270)
.|+||+||||++++..|+..|+ +|+++.... ..|+.+. .++++.++ ++|+||++|+....
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~--~v~~~~~~~----~~Dl~~~------------~~l~~~~~~~~~d~Vih~A~~~~~ 62 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGF--TNLVLRTHK----ELDLTRQ------------ADVEAFFAKEKPTYVILAAAKVGG 62 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCC--cEEEeeccc----cCCCCCH------------HHHHHHHhccCCCEEEEeeeeecc
Confidence 3899999999999999998887 666554321 1233322 13444444 57999999875321
Q ss_pred ---CCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecC-CCCCc--HHHHHHHHHHh-CCCCCCCeeeechhhHHHHH
Q 024248 128 ---PGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISN-PVNST--VPIAAEVFKKV-GTYDPKRLLGVTMLDVVRAN 200 (270)
Q Consensus 128 ---~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sN-Pv~~~--~~i~t~~~~~~-sg~p~~kviG~t~ldt~r~~ 200 (270)
......+++..|.....++++.+++.... .+|++|. -+... ...+.|-.... ..-|....+|.++....++.
T Consensus 63 ~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~-~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~ 141 (306)
T PLN02725 63 IHANMTYPADFIRENLQIQTNVIDAAYRHGVK-KLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAGIKMC 141 (306)
T ss_pred cchhhhCcHHHHHHHhHHHHHHHHHHHHcCCC-eEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHHHHHH
Confidence 11234467788999999999999986543 3444432 11100 00011110000 10121224777776666666
Q ss_pred HHHHHHhCCCCCccc-eEEEccC
Q 024248 201 TFVAEVLGLDPREVD-VPVVGGH 222 (270)
Q Consensus 201 ~~lA~~l~v~~~~v~-~~V~G~h 222 (270)
..+.+..+++...++ +.|+|.+
T Consensus 142 ~~~~~~~~~~~~~~R~~~vyG~~ 164 (306)
T PLN02725 142 QAYRIQYGWDAISGMPTNLYGPH 164 (306)
T ss_pred HHHHHHhCCCEEEEEecceeCCC
Confidence 677788888877775 4799975
No 118
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=98.29 E-value=4.1e-06 Score=74.89 Aligned_cols=95 Identities=22% Similarity=0.294 Sum_probs=68.0
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCC--CEEEEcCCCC
Q 024248 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGM--DIVIIPAGVP 125 (270)
Q Consensus 48 KI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~A--DvVIi~ag~~ 125 (270)
||.|+||+|++|++++..|++.|+ +|+++++.. .|+.+. .+++++++++ |+||++++..
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~--~v~~~~r~~-----~d~~~~------------~~~~~~~~~~~~d~vi~~a~~~ 61 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGR--VVVALTSSQ-----LDLTDP------------EALERLLRAIRPDAVVNTAAYT 61 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCC--EEEEeCCcc-----cCCCCH------------HHHHHHHHhCCCCEEEECCccc
Confidence 689999999999999999999998 999998741 233222 2355666665 9999999764
Q ss_pred CCCC--CchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEec
Q 024248 126 RKPG--MTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163 (270)
Q Consensus 126 ~~~g--~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~s 163 (270)
.... ......+..|+....++++.+.+... .++++|
T Consensus 62 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~v~~S 99 (287)
T TIGR01214 62 DVDGAESDPEKAFAVNALAPQNLARAAARHGA--RLVHIS 99 (287)
T ss_pred cccccccCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Confidence 3211 12345678899999999999887543 455554
No 119
>PLN02240 UDP-glucose 4-epimerase
Probab=98.28 E-value=7.9e-06 Score=75.25 Aligned_cols=168 Identities=17% Similarity=0.097 Sum_probs=92.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCCh--h---HHHHhhccccCcceee----eeccCCHHHHhC--C
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--G---VTADISHMDTNAVVRG----FLGQQQLEDALT--G 114 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~--~---~~~dl~~~~~~~~~~~----i~~t~d~~~al~--~ 114 (270)
.+||+|+||+|++|++++..|++.|+ +|+++|+.... . ...++... ....+.. +....+++++++ +
T Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~l~~~~~~~~ 81 (352)
T PLN02240 5 GRTILVTGGAGYIGSHTVLQLLLAGY--KVVVIDNLDNSSEEALRRVKELAGD-LGDNLVFHKVDLRDKEALEKVFASTR 81 (352)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCCcchHHHHHHHHHhhcc-cCccceEEecCcCCHHHHHHHHHhCC
Confidence 45899999999999999999999998 99999874321 1 11111110 0011111 111123444444 6
Q ss_pred CCEEEEcCCCCCC-CC-CchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCCCcHHHHH----HHHHHhCCCCCCCe
Q 024248 115 MDIVIIPAGVPRK-PG-MTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAA----EVFKKVGTYDPKRL 188 (270)
Q Consensus 115 ADvVIi~ag~~~~-~g-~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t----~~~~~~sg~p~~kv 188 (270)
+|+||++++.... .. ......+..|+.....+++.+++.... .++++|.- . +.. ..+.+...+.+...
T Consensus 82 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~Ss~-~----vyg~~~~~~~~E~~~~~~~~~ 155 (352)
T PLN02240 82 FDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCK-KLVFSSSA-T----VYGQPEEVPCTEEFPLSATNP 155 (352)
T ss_pred CCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEccH-H----HhCCCCCCCCCCCCCCCCCCH
Confidence 8999999875421 11 123456789999999999988765433 45545431 1 000 00001111222334
Q ss_pred eeechhhHHHHHHHHHHH-hCCCCCccc-eEEEccC
Q 024248 189 LGVTMLDVVRANTFVAEV-LGLDPREVD-VPVVGGH 222 (270)
Q Consensus 189 iG~t~ldt~r~~~~lA~~-l~v~~~~v~-~~V~G~h 222 (270)
+|.++....++...+++. .++....++ +.++|.|
T Consensus 156 Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~ 191 (352)
T PLN02240 156 YGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAH 191 (352)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCC
Confidence 666666666666656543 455444443 2455543
No 120
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=98.27 E-value=2.2e-05 Score=67.75 Aligned_cols=95 Identities=20% Similarity=0.305 Sum_probs=63.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCCCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPR 126 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag~~~ 126 (270)
|+++|+|+ |.+|+.++..+...|+ ||.+-.++........-.. ..+.+ ... ..++|.+.||+||.+. |
T Consensus 2 ~~~~i~Gt-GniG~alA~~~a~ag~--eV~igs~r~~~~~~a~a~~--l~~~i---~~~-~~~dA~~~aDVVvLAV--P- 69 (211)
T COG2085 2 MIIAIIGT-GNIGSALALRLAKAGH--EVIIGSSRGPKALAAAAAA--LGPLI---TGG-SNEDAAALADVVVLAV--P- 69 (211)
T ss_pred cEEEEecc-ChHHHHHHHHHHhCCC--eEEEecCCChhHHHHHHHh--hcccc---ccC-ChHHHHhcCCEEEEec--c-
Confidence 68899996 9999999999999999 9988877654322211111 11221 222 4568999999999986 2
Q ss_pred CCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCC
Q 024248 127 KPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPV 166 (270)
Q Consensus 127 ~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv 166 (270)
.+.+.++++.++..-.+-++|=.|||.
T Consensus 70 -------------~~a~~~v~~~l~~~~~~KIvID~tnp~ 96 (211)
T COG2085 70 -------------FEAIPDVLAELRDALGGKIVIDATNPI 96 (211)
T ss_pred -------------HHHHHhHHHHHHHHhCCeEEEecCCCc
Confidence 233345555665544467788889994
No 121
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=98.26 E-value=9.2e-06 Score=77.56 Aligned_cols=108 Identities=20% Similarity=0.166 Sum_probs=67.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhcccc---Ccce----------eeeeccCCHHHHh
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT---NAVV----------RGFLGQQQLEDAL 112 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~---~~~~----------~~i~~t~d~~~al 112 (270)
.|||+|||. |++|..+|..|++.|+ +|+.+|+++..... +..... .+.+ ..+..+++ +
T Consensus 3 ~~kI~VIGl-G~~G~~~A~~La~~G~--~V~~~D~~~~~v~~--l~~g~~~~~e~~l~~~l~~~~~~g~l~~~~~----~ 73 (415)
T PRK11064 3 FETISVIGL-GYIGLPTAAAFASRQK--QVIGVDINQHAVDT--INRGEIHIVEPDLDMVVKTAVEGGYLRATTT----P 73 (415)
T ss_pred ccEEEEECc-chhhHHHHHHHHhCCC--EEEEEeCCHHHHHH--HHCCCCCcCCCCHHHHHHHHhhcCceeeecc----c
Confidence 469999997 9999999999999998 99999998642221 211100 0000 00112222 3
Q ss_pred CCCCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhC-CCCEEEEec-CCCCC
Q 024248 113 TGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLIS-NPVNS 168 (270)
Q Consensus 113 ~~ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~s-NPv~~ 168 (270)
++||+||++..++.+... ..++..+.+.++.+.+.. ++.+||+-| .|..+
T Consensus 74 ~~aDvvii~vptp~~~~~------~~dl~~v~~~~~~i~~~l~~g~iVI~~STv~pgt 125 (415)
T PRK11064 74 EPADAFLIAVPTPFKGDH------EPDLTYVEAAAKSIAPVLKKGDLVILESTSPVGA 125 (415)
T ss_pred ccCCEEEEEcCCCCCCCC------CcChHHHHHHHHHHHHhCCCCCEEEEeCCCCCCH
Confidence 589999999988754321 123455566667776655 455655554 46554
No 122
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=98.26 E-value=9.9e-06 Score=73.18 Aligned_cols=174 Identities=17% Similarity=0.158 Sum_probs=110.5
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh---HHHHhhccccCcceee-eeccCCHHHHhC--CCCEEEE
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG---VTADISHMDTNAVVRG-FLGQQQLEDALT--GMDIVII 120 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~---~~~dl~~~~~~~~~~~-i~~t~d~~~al~--~ADvVIi 120 (270)
|++.|+|++||||+++...+..+....+|+.+|.-.=.+ -..++.+...+..++. +.....+.+.++ ..|+|++
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh 80 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH 80 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence 689999999999999998888776545789998753122 2233433211111211 111112334555 6899999
Q ss_pred cCCCCC-CCC-CchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEe-cCCCCCcHHHHHHHHHHhCCCCCCCeeeechhhHH
Q 024248 121 PAGVPR-KPG-MTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI-SNPVNSTVPIAAEVFKKVGTYDPKRLLGVTMLDVV 197 (270)
Q Consensus 121 ~ag~~~-~~g-~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~-sNPv~~~~~i~t~~~~~~sg~p~~kviG~t~ldt~ 197 (270)
.|.-.. +-. ....++++.|+-....++++++++...-.++-+ |.-|......--..+-+.+.+.|+-.+..++-.+.
T Consensus 81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAasD 160 (340)
T COG1088 81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAASD 160 (340)
T ss_pred echhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhhHH
Confidence 875331 101 124678999999999999999998765344444 44444311000002334556777888888777777
Q ss_pred HHHHHHHHHhCCCCCccce-EEEc
Q 024248 198 RANTFVAEVLGLDPREVDV-PVVG 220 (270)
Q Consensus 198 r~~~~lA~~l~v~~~~v~~-~V~G 220 (270)
.+.+.+.+.+|++..-.++ .-+|
T Consensus 161 ~lVray~~TYglp~~ItrcSNNYG 184 (340)
T COG1088 161 LLVRAYVRTYGLPATITRCSNNYG 184 (340)
T ss_pred HHHHHHHHHcCCceEEecCCCCcC
Confidence 7889999999998766665 6777
No 123
>COG0677 WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=98.21 E-value=2e-05 Score=73.66 Aligned_cols=123 Identities=20% Similarity=0.257 Sum_probs=78.4
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCCh------hHH------HH--hhccccCcceeeeeccCCHHHHh
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP------GVT------AD--ISHMDTNAVVRGFLGQQQLEDAL 112 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~------~~~------~d--l~~~~~~~~~~~i~~t~d~~~al 112 (270)
++|+|+|- |+||..+|..++.+|. +|+.+|+++.. |+. .| +........ +..|+|+ +.+
T Consensus 10 ~~I~ViGL-GYVGLPlA~~fA~~G~--~ViG~DIn~~~Vd~ln~G~~~i~e~~~~~~v~~~v~~g~---lraTtd~-~~l 82 (436)
T COG0677 10 ATIGVIGL-GYVGLPLAAAFASAGF--KVIGVDINQKKVDKLNRGESYIEEPDLDEVVKEAVESGK---LRATTDP-EEL 82 (436)
T ss_pred eEEEEEcc-ccccHHHHHHHHHcCC--ceEeEeCCHHHHHHHhCCcceeecCcHHHHHHHHHhcCC---ceEecCh-hhc
Confidence 79999998 9999999999999999 99999998631 110 01 111111122 3467888 457
Q ss_pred CCCCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCC-EEEE-ecCCCCCcHHHHHHHHHHhCC
Q 024248 113 TGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKA-IVNL-ISNPVNSTVPIAAEVFKKVGT 182 (270)
Q Consensus 113 ~~ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a-~viv-~sNPv~~~~~i~t~~~~~~sg 182 (270)
+.||+++||+.+|-+... +-++..+.+.++.|.++-.++ .+++ .|-|..++-.++-.++...+|
T Consensus 83 ~~~dv~iI~VPTPl~~~~------~pDls~v~~aa~sIa~~L~kG~LVIlEST~~PGTTe~v~~plle~~sg 148 (436)
T COG0677 83 KECDVFIICVPTPLKKYR------EPDLSYVESAARSIAPVLKKGDLVILESTTPPGTTEEVVKPLLEERSG 148 (436)
T ss_pred ccCCEEEEEecCCcCCCC------CCChHHHHHHHHHHHHhcCCCCEEEEecCCCCCcHHHHHHHHHhhcCC
Confidence 899999999988765422 223455566677777665444 3333 466766544444444444344
No 124
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=98.21 E-value=7.1e-06 Score=61.72 Aligned_cols=94 Identities=17% Similarity=0.205 Sum_probs=59.9
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCC-ccEEEEE-eCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCCCC
Q 024248 48 KVAVLGAAGGIGQPLAMLMKINPL-VSVLHLY-DVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVP 125 (270)
Q Consensus 48 KI~IIGa~G~VGs~la~~l~~~g~-~~eV~Lv-D~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag~~ 125 (270)
||+|||+ |.+|++++..|+..|. ..+|.++ +++++. ..++.... ... + .+.+..++++.||+||++.-.
T Consensus 1 kI~iIG~-G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~--~~~~~~~~-~~~---~-~~~~~~~~~~~advvilav~p- 71 (96)
T PF03807_consen 1 KIGIIGA-GNMGSALARGLLASGIKPHEVIIVSSRSPEK--AAELAKEY-GVQ---A-TADDNEEAAQEADVVILAVKP- 71 (96)
T ss_dssp EEEEEST-SHHHHHHHHHHHHTTS-GGEEEEEEESSHHH--HHHHHHHC-TTE---E-ESEEHHHHHHHTSEEEE-S-G-
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCceeEEeeccCcHHH--HHHHHHhh-ccc---c-ccCChHHhhccCCEEEEEECH-
Confidence 7999997 9999999999999881 1288866 886532 22232211 001 1 122567899999999999721
Q ss_pred CCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCC
Q 024248 126 RKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP 165 (270)
Q Consensus 126 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNP 165 (270)
..+.++++.+....++..+|-++||
T Consensus 72 ---------------~~~~~v~~~i~~~~~~~~vis~~ag 96 (96)
T PF03807_consen 72 ---------------QQLPEVLSEIPHLLKGKLVISIAAG 96 (96)
T ss_dssp ---------------GGHHHHHHHHHHHHTTSEEEEESTT
T ss_pred ---------------HHHHHHHHHHhhccCCCEEEEeCCC
Confidence 1124566666444577778777665
No 125
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=98.21 E-value=1.5e-05 Score=72.90 Aligned_cols=80 Identities=21% Similarity=0.325 Sum_probs=57.4
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
..+|||+|+|+ |.+|++++..|...|+ +|+++|+++. .++++++++||+||++..
T Consensus 2 ~~~m~I~iiG~-G~~G~~lA~~l~~~G~--~V~~~~r~~~----------------------~~~~~~~~~advvi~~vp 56 (308)
T PRK14619 2 TQPKTIAILGA-GAWGSTLAGLASANGH--RVRVWSRRSG----------------------LSLAAVLADADVIVSAVS 56 (308)
T ss_pred CCCCEEEEECc-cHHHHHHHHHHHHCCC--EEEEEeCCCC----------------------CCHHHHHhcCCEEEEECC
Confidence 35689999997 9999999999999999 9999998642 245567788888888752
Q ss_pred CCCCCCCchhhhHHhhHHHHHHHHHHHhHh--CCCCEEEEecC
Q 024248 124 VPRKPGMTRDDLFNINAGIVKTLCEGIAKC--CPKAIVNLISN 164 (270)
Q Consensus 124 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~--~p~a~viv~sN 164 (270)
. ..++++++.+..+ .++.+++..|+
T Consensus 57 ~----------------~~~~~v~~~l~~~~~~~~~ivi~~s~ 83 (308)
T PRK14619 57 M----------------KGVRPVAEQVQALNLPPETIIVTATK 83 (308)
T ss_pred h----------------HHHHHHHHHHHHhcCCCCcEEEEeCC
Confidence 1 1234445555432 35566666665
No 126
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=98.19 E-value=9.4e-06 Score=79.93 Aligned_cols=115 Identities=15% Similarity=0.073 Sum_probs=73.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhH--HHHhhc-----ccc--Ccceee----eeccCCHHHHh
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV--TADISH-----MDT--NAVVRG----FLGQQQLEDAL 112 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~--~~dl~~-----~~~--~~~~~~----i~~t~d~~~al 112 (270)
...|+|+||+|++|..++..|+..|+ +|++++++..... ..++.. ... ...+.. +....++++++
T Consensus 80 gKvVLVTGATGgIG~aLAr~LLk~G~--~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aL 157 (576)
T PLN03209 80 EDLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL 157 (576)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHh
Confidence 34699999999999999999999998 9999998764221 111111 000 011111 11122455678
Q ss_pred CCCCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEec
Q 024248 113 TGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163 (270)
Q Consensus 113 ~~ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~s 163 (270)
.++|+||+++|.......+....+..|.....++++.+.+..-. .||++|
T Consensus 158 ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVg-RIV~VS 207 (576)
T PLN03209 158 GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVN-HFILVT 207 (576)
T ss_pred cCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCC-EEEEEc
Confidence 99999999998653211122234567888889999998876433 455554
No 127
>PRK07201 short chain dehydrogenase; Provisional
Probab=98.18 E-value=2.1e-05 Score=78.67 Aligned_cols=112 Identities=13% Similarity=0.092 Sum_probs=70.0
Q ss_pred CeEEEEcCCCchHHHHHHHHH--hCCCccEEEEEeCCCChhHHHHhhccccCcceee----eec------cCCHHHHhCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMK--INPLVSVLHLYDVVNTPGVTADISHMDTNAVVRG----FLG------QQQLEDALTG 114 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~--~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~----i~~------t~d~~~al~~ 114 (270)
|||.|+||+||+|++++..|+ ..+. +|++++++.......++........+.. +.. ..++ +.+++
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~--~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~-~~l~~ 77 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREA--TVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADI-AELGD 77 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCC--EEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHH-HHhcC
Confidence 699999999999999999998 4666 9999999653222222211000001111 100 0123 23489
Q ss_pred CCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEec
Q 024248 115 MDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163 (270)
Q Consensus 115 ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~s 163 (270)
+|+||++|+.... ..+..++...|+....++++.+.+.... .++.+|
T Consensus 78 ~D~Vih~Aa~~~~-~~~~~~~~~~nv~gt~~ll~~a~~~~~~-~~v~~S 124 (657)
T PRK07201 78 IDHVVHLAAIYDL-TADEEAQRAANVDGTRNVVELAERLQAA-TFHHVS 124 (657)
T ss_pred CCEEEECceeecC-CCCHHHHHHHHhHHHHHHHHHHHhcCCC-eEEEEe
Confidence 9999999985422 2233456688999999999999876433 344443
No 128
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=98.17 E-value=1.3e-05 Score=66.64 Aligned_cols=64 Identities=17% Similarity=0.271 Sum_probs=47.5
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~a 122 (270)
|||++||. |.+|+.++..|+..|+ +|+.||++.+ ...++.+.. .....++++++++||+||.+.
T Consensus 2 ~~Ig~IGl-G~mG~~~a~~L~~~g~--~v~~~d~~~~--~~~~~~~~g-------~~~~~s~~e~~~~~dvvi~~v 65 (163)
T PF03446_consen 2 MKIGFIGL-GNMGSAMARNLAKAGY--EVTVYDRSPE--KAEALAEAG-------AEVADSPAEAAEQADVVILCV 65 (163)
T ss_dssp BEEEEE---SHHHHHHHHHHHHTTT--EEEEEESSHH--HHHHHHHTT-------EEEESSHHHHHHHBSEEEE-S
T ss_pred CEEEEEch-HHHHHHHHHHHHhcCC--eEEeeccchh--hhhhhHHhh-------hhhhhhhhhHhhcccceEeec
Confidence 59999997 9999999999999999 9999998743 233344321 122457889999999999985
No 129
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=98.16 E-value=6e-06 Score=74.12 Aligned_cols=173 Identities=16% Similarity=0.094 Sum_probs=101.1
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
...+||+|+||+|||||+++..|...|+ +|..+|.....-+ ..+.+...++..+.+. .+.....+..+|-|++.|.
T Consensus 25 ~~~lrI~itGgaGFIgSHLvdkLm~egh--~VIa~Dn~ftg~k-~n~~~~~~~~~fel~~-hdv~~pl~~evD~IyhLAa 100 (350)
T KOG1429|consen 25 SQNLRILITGGAGFIGSHLVDKLMTEGH--EVIALDNYFTGRK-ENLEHWIGHPNFELIR-HDVVEPLLKEVDQIYHLAA 100 (350)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHhcCC--eEEEEecccccch-hhcchhccCcceeEEE-eechhHHHHHhhhhhhhcc
Confidence 4457999999999999999999999998 9999998653221 2233332333333211 2223456889999999886
Q ss_pred CCCCCC--CchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecC-CCCCcHHHHH---HHHH-HhCCCCCCCeeeechhhH
Q 024248 124 VPRKPG--MTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISN-PVNSTVPIAA---EVFK-KVGTYDPKRLLGVTMLDV 196 (270)
Q Consensus 124 ~~~~~g--~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sN-Pv~~~~~i~t---~~~~-~~sg~p~~kviG~t~ldt 196 (270)
.....+ ....+.+..|.-.+...+..+++.+ +.++.+|. -++.. +... +..| ...-..++-+++..+.-+
T Consensus 101 pasp~~y~~npvktIktN~igtln~lglakrv~--aR~l~aSTseVYgd-p~~hpq~e~ywg~vnpigpr~cydegKr~a 177 (350)
T KOG1429|consen 101 PASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG--ARFLLASTSEVYGD-PLVHPQVETYWGNVNPIGPRSCYDEGKRVA 177 (350)
T ss_pred CCCCcccccCccceeeecchhhHHHHHHHHHhC--ceEEEeecccccCC-cccCCCccccccccCcCCchhhhhHHHHHH
Confidence 443222 2334455667766677777766654 66666552 12211 0000 0000 000011222233345666
Q ss_pred HHHHHHHHHHhCCCCCccc-eEEEccCC
Q 024248 197 VRANTFVAEVLGLDPREVD-VPVVGGHA 223 (270)
Q Consensus 197 ~r~~~~lA~~l~v~~~~v~-~~V~G~hg 223 (270)
.++.+.+.+..|+.-.-.+ +..+|..+
T Consensus 178 E~L~~~y~k~~giE~rIaRifNtyGPrm 205 (350)
T KOG1429|consen 178 ETLCYAYHKQEGIEVRIARIFNTYGPRM 205 (350)
T ss_pred HHHHHHhhcccCcEEEEEeeecccCCcc
Confidence 7888888888888765554 36677654
No 130
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=98.15 E-value=2.6e-05 Score=70.75 Aligned_cols=115 Identities=13% Similarity=0.166 Sum_probs=69.9
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccc-----cCcce-eeeeccCCHHHHhCCCCEEEE
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD-----TNAVV-RGFLGQQQLEDALTGMDIVII 120 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~-----~~~~~-~~i~~t~d~~~al~~ADvVIi 120 (270)
|||+|+|+ |.+|+.++..|+..|+ +|+++++ +.... .+.+.. ..... ......++.+++.+++|+||+
T Consensus 1 mkI~IiG~-G~iG~~~a~~L~~~g~--~V~~~~r-~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vil 74 (305)
T PRK12921 1 MRIAVVGA-GAVGGTFGGRLLEAGR--DVTFLVR-PKRAK--ALRERGLVIRSDHGDAVVPGPVITDPEELTGPFDLVIL 74 (305)
T ss_pred CeEEEECC-CHHHHHHHHHHHHCCC--ceEEEec-HHHHH--HHHhCCeEEEeCCCeEEecceeecCHHHccCCCCEEEE
Confidence 79999998 9999999999999998 9999998 43211 111110 00000 001123466565689999999
Q ss_pred cCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhC-CCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeee
Q 024248 121 PAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLG 190 (270)
Q Consensus 121 ~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG 190 (270)
+.... .+.++++.+.... ++.+|+.+.|.++. .+.+.+. +|++++++
T Consensus 75 avk~~----------------~~~~~~~~l~~~~~~~~~ii~~~nG~~~-----~~~l~~~--~~~~~v~~ 122 (305)
T PRK12921 75 AVKAY----------------QLDAAIPDLKPLVGEDTVIIPLQNGIGQ-----LEQLEPY--FGRERVLG 122 (305)
T ss_pred Eeccc----------------CHHHHHHHHHhhcCCCCEEEEeeCCCCh-----HHHHHHh--CCcccEEE
Confidence 97322 1233445555433 56777778898763 2223332 56667663
No 131
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=98.14 E-value=2.6e-05 Score=78.56 Aligned_cols=140 Identities=16% Similarity=0.103 Sum_probs=81.6
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHh--CCCCEEEE
Q 024248 43 GSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDAL--TGMDIVII 120 (270)
Q Consensus 43 ~~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al--~~ADvVIi 120 (270)
+.+.|||.|+||+||+|++++..|..+|+ +|... . .|+.+.. .+...+ .+.|+||+
T Consensus 377 ~~~~mkiLVtGa~G~iG~~l~~~L~~~g~--~v~~~-~-------~~l~d~~------------~v~~~i~~~~pd~Vih 434 (668)
T PLN02260 377 GKPSLKFLIYGRTGWIGGLLGKLCEKQGI--AYEYG-K-------GRLEDRS------------SLLADIRNVKPTHVFN 434 (668)
T ss_pred CCCCceEEEECCCchHHHHHHHHHHhCCC--eEEee-c-------cccccHH------------HHHHHHHhhCCCEEEE
Confidence 45679999999999999999999998887 76321 1 0111110 111222 27899999
Q ss_pred cCCCCCCC--C---CchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEe-cCCCCCcHH--HHH-H-HHHHh-CCCCCCCee
Q 024248 121 PAGVPRKP--G---MTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI-SNPVNSTVP--IAA-E-VFKKV-GTYDPKRLL 189 (270)
Q Consensus 121 ~ag~~~~~--g---~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~-sNPv~~~~~--i~t-~-~~~~~-sg~p~~kvi 189 (270)
+|+....+ + .+..+.+..|+....++++.+++... .++++ |.-+..-.. ... . -+.+. .-.|+...+
T Consensus 435 ~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~--~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Y 512 (668)
T PLN02260 435 AAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGL--LMMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFY 512 (668)
T ss_pred CCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCC--eEEEEcccceecCCcccccccCCCCCcCCCCCCCCChh
Confidence 99754221 1 13455678999999999999998754 34444 332210000 000 0 00111 011233578
Q ss_pred eechhhHHHHHHHHHHH
Q 024248 190 GVTMLDVVRANTFVAEV 206 (270)
Q Consensus 190 G~t~ldt~r~~~~lA~~ 206 (270)
|.+++...++...+++.
T Consensus 513 g~sK~~~E~~~~~~~~~ 529 (668)
T PLN02260 513 SKTKAMVEELLREYDNV 529 (668)
T ss_pred hHHHHHHHHHHHhhhhh
Confidence 88888877776655443
No 132
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=98.13 E-value=4.7e-05 Score=68.88 Aligned_cols=100 Identities=19% Similarity=0.230 Sum_probs=62.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhcccc---Ccce-eeeeccCCHHHHhCCCCEEEEcC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT---NAVV-RGFLGQQQLEDALTGMDIVIIPA 122 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~---~~~~-~~i~~t~d~~~al~~ADvVIi~a 122 (270)
|||+|+|+ |.+|+.++..|.+.|+ +|+++|++..... .+..... .... ..+..+++.++ ++++|+||++.
T Consensus 1 m~I~IiG~-G~~G~~~a~~L~~~g~--~V~~~~r~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~d~vila~ 74 (304)
T PRK06522 1 MKIAILGA-GAIGGLFGAALAQAGH--DVTLVARRGAHLD--ALNENGLRLEDGEITVPVLAADDPAE-LGPQDLVILAV 74 (304)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC--eEEEEECChHHHH--HHHHcCCcccCCceeecccCCCChhH-cCCCCEEEEec
Confidence 79999998 9999999999999998 9999998643211 1111000 0000 00122345544 48999999996
Q ss_pred CCCCCCCCchhhhHHhhHHHHHHHHHHHhHh-CCCCEEEEecCCCCC
Q 024248 123 GVPRKPGMTRDDLFNINAGIVKTLCEGIAKC-CPKAIVNLISNPVNS 168 (270)
Q Consensus 123 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~sNPv~~ 168 (270)
.... +.++++.+... .++..|+...|..+.
T Consensus 75 k~~~----------------~~~~~~~l~~~l~~~~~iv~~~nG~~~ 105 (304)
T PRK06522 75 KAYQ----------------LPAALPSLAPLLGPDTPVLFLQNGVGH 105 (304)
T ss_pred cccc----------------HHHHHHHHhhhcCCCCEEEEecCCCCc
Confidence 3220 23445555543 356778888898763
No 133
>PTZ00345 glycerol-3-phosphate dehydrogenase; Provisional
Probab=98.12 E-value=4.9e-05 Score=71.41 Aligned_cols=76 Identities=16% Similarity=0.288 Sum_probs=53.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCC-----ccEEEEEeCCCC---hhHHHHhhcccc----Ccc--e-eeeeccCCHHH
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPL-----VSVLHLYDVVNT---PGVTADISHMDT----NAV--V-RGFLGQQQLED 110 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~-----~~eV~LvD~~~~---~~~~~dl~~~~~----~~~--~-~~i~~t~d~~~ 110 (270)
+|||+|+|+ |.-|+++|..|..++. ..+|.++.+++. .....++.+... .+. + ..+..++|+++
T Consensus 11 ~~ki~ViGa-G~wGtAlA~~l~~n~~~~~~~~~~V~lw~~~~~~~~~~~~~~in~~~~N~~ylp~~~Lp~ni~~tsdl~e 89 (365)
T PTZ00345 11 PLKVSVIGS-GNWGSAISKVVGENTQRNYIFHNEVRMWVLEEIVEGEKLSDIINTKHENVKYLPGIKLPDNIVAVSDLKE 89 (365)
T ss_pred CCeEEEECC-CHHHHHHHHHHHhcCCcccCCCCeEEEEEecccccchHHHHHHHhcCCCcccCCCCcCCCceEEecCHHH
Confidence 479999998 9999999999998861 129999998864 123334442211 111 1 12445778888
Q ss_pred HhCCCCEEEEcC
Q 024248 111 ALTGMDIVIIPA 122 (270)
Q Consensus 111 al~~ADvVIi~a 122 (270)
++++||+||++.
T Consensus 90 av~~aDiIvlAV 101 (365)
T PTZ00345 90 AVEDADLLIFVI 101 (365)
T ss_pred HHhcCCEEEEEc
Confidence 999999999986
No 134
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=98.12 E-value=3.9e-05 Score=70.17 Aligned_cols=100 Identities=19% Similarity=0.315 Sum_probs=63.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhcc----cc--Cccee-eeeccCCHHHHhCCCCEEE
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM----DT--NAVVR-GFLGQQQLEDALTGMDIVI 119 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~----~~--~~~~~-~i~~t~d~~~al~~ADvVI 119 (270)
|||+|||+ |.+|+.++..|+..|+ +|.++|+++.... .+... .. ...+. .+..++++++++++||+||
T Consensus 2 mkI~iiG~-G~mG~~~a~~L~~~g~--~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi 76 (325)
T PRK00094 2 MKIAVLGA-GSWGTALAIVLARNGH--DVTLWARDPEQAA--EINADRENPRYLPGIKLPDNLRATTDLAEALADADLIL 76 (325)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC--EEEEEECCHHHHH--HHHHcCcccccCCCCcCCCCeEEeCCHHHHHhCCCEEE
Confidence 69999998 9999999999999998 9999999753211 11111 00 00000 1223457777889999999
Q ss_pred EcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhC-CCCEEEEecCCCC
Q 024248 120 IPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVN 167 (270)
Q Consensus 120 i~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~sNPv~ 167 (270)
++... ..+.++++.+.... ++.+++.++|.++
T Consensus 77 ~~v~~----------------~~~~~v~~~l~~~~~~~~~vi~~~ngv~ 109 (325)
T PRK00094 77 VAVPS----------------QALREVLKQLKPLLPPDAPIVWATKGIE 109 (325)
T ss_pred EeCCH----------------HHHHHHHHHHHhhcCCCCEEEEEeeccc
Confidence 98631 12244445555543 5677777776544
No 135
>PRK12320 hypothetical protein; Provisional
Probab=98.12 E-value=1.2e-05 Score=81.15 Aligned_cols=100 Identities=13% Similarity=0.072 Sum_probs=67.1
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCccee-eeeccCCHHHHhCCCCEEEEcCCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVR-GFLGQQQLEDALTGMDIVIIPAGVP 125 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~-~i~~t~d~~~al~~ADvVIi~ag~~ 125 (270)
|||.|+||+||+|++++..|+.+|+ +|+++|+.... ..+.. ...+. .+... .+.+++.++|+||++++..
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~--~Vi~ldr~~~~-----~~~~~-ve~v~~Dl~d~-~l~~al~~~D~VIHLAa~~ 71 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGH--TVSGIAQHPHD-----ALDPR-VDYVCASLRNP-VLQELAGEADAVIHLAPVD 71 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC--EEEEEeCChhh-----cccCC-ceEEEccCCCH-HHHHHhcCCCEEEEcCccC
Confidence 7999999999999999999999998 99999985421 01000 00000 01111 2456678999999998753
Q ss_pred CCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEec
Q 024248 126 RKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163 (270)
Q Consensus 126 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~s 163 (270)
. .. ....|+....++++.+++... .++++|
T Consensus 72 ~--~~----~~~vNv~Gt~nLleAA~~~Gv--RiV~~S 101 (699)
T PRK12320 72 T--SA----PGGVGITGLAHVANAAARAGA--RLLFVS 101 (699)
T ss_pred c--cc----hhhHHHHHHHHHHHHHHHcCC--eEEEEE
Confidence 1 11 124688889999999987653 455555
No 136
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=98.12 E-value=3.8e-05 Score=72.66 Aligned_cols=114 Identities=18% Similarity=0.116 Sum_probs=70.6
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh----HHHHhhccccCcc-ee-eeeccCCHHHHhC----
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG----VTADISHMDTNAV-VR-GFLGQQQLEDALT---- 113 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~----~~~dl~~~~~~~~-~~-~i~~t~d~~~al~---- 113 (270)
.+.|||.|+||+|++|++++..|+.+|+ +|++++++.... ...++........ +. .+....+++++++
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~ 135 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRGY--NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGD 135 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCC
Confidence 4457999999999999999999999998 999999875311 0111111000001 10 1111223555566
Q ss_pred CCCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEec
Q 024248 114 GMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163 (270)
Q Consensus 114 ~ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~s 163 (270)
++|+||++++.... + ..+.+..|.....++++.+++..-. .++++|
T Consensus 136 ~~D~Vi~~aa~~~~-~--~~~~~~vn~~~~~~ll~aa~~~gv~-r~V~iS 181 (390)
T PLN02657 136 PVDVVVSCLASRTG-G--VKDSWKIDYQATKNSLDAGREVGAK-HFVLLS 181 (390)
T ss_pred CCcEEEECCccCCC-C--CccchhhHHHHHHHHHHHHHHcCCC-EEEEEe
Confidence 59999998875321 1 1234567888888999998876543 344444
No 137
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=98.09 E-value=4.4e-05 Score=70.02 Aligned_cols=121 Identities=17% Similarity=0.252 Sum_probs=71.3
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHH---HhhccccCcceeeeeccCCHHHHhCCCCEEEE
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTA---DISHMDTNAVVRGFLGQQQLEDALTGMDIVII 120 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~---dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi 120 (270)
+..|||+|+|+ |.||+.++..|+..|+ +|.+++++....... .+........+.....+++. ++...+|+||+
T Consensus 3 ~~~m~I~IiG~-GaiG~~lA~~L~~~g~--~V~~~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~D~vil 78 (313)
T PRK06249 3 SETPRIGIIGT-GAIGGFYGAMLARAGF--DVHFLLRSDYEAVRENGLQVDSVHGDFHLPPVQAYRSA-EDMPPCDWVLV 78 (313)
T ss_pred CcCcEEEEECC-CHHHHHHHHHHHHCCC--eEEEEEeCCHHHHHhCCeEEEeCCCCeeecCceEEcch-hhcCCCCEEEE
Confidence 34689999998 9999999999999998 999999875211110 00000000011101122333 35678999999
Q ss_pred cCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHh-CCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeeee
Q 024248 121 PAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKC-CPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV 191 (270)
Q Consensus 121 ~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG~ 191 (270)
+.-... ..++++.+... .+++.++...|-.+. .+.+.+. +|+.++++.
T Consensus 79 avK~~~----------------~~~~~~~l~~~~~~~~~iv~lqNG~~~-----~e~l~~~--~~~~~v~~g 127 (313)
T PRK06249 79 GLKTTA----------------NALLAPLIPQVAAPDAKVLLLQNGLGV-----EEQLREI--LPAEHLLGG 127 (313)
T ss_pred EecCCC----------------hHhHHHHHhhhcCCCCEEEEecCCCCc-----HHHHHHH--CCCCcEEEE
Confidence 963321 12333444433 367888878887762 2333333 677777644
No 138
>TIGR03376 glycerol3P_DH glycerol-3-phosphate dehydrogenase (NAD(+)). Members of this protein family are the eukaryotic enzyme, glycerol-3-phosphate dehydrogenase (NAD(+)) (EC 1.1.1.8). Enzymatic activity for 1.1.1.8 is defined as sn-glycerol 3-phosphate + NAD(+) = glycerone phosphate + NADH. Note the very similar reactions of enzymes defined as EC 1.1.1.94 and 1.1.99.5, assigned to families of proteins in the bacteria.
Probab=98.08 E-value=6.2e-05 Score=70.15 Aligned_cols=72 Identities=21% Similarity=0.336 Sum_probs=50.3
Q ss_pred eEEEEcCCCchHHHHHHHHHhCC--------CccEEEEEeCCC---ChhHHHHhhc--ccc--Ccce--e-eeeccCCHH
Q 024248 48 KVAVLGAAGGIGQPLAMLMKINP--------LVSVLHLYDVVN---TPGVTADISH--MDT--NAVV--R-GFLGQQQLE 109 (270)
Q Consensus 48 KI~IIGa~G~VGs~la~~l~~~g--------~~~eV~LvD~~~---~~~~~~dl~~--~~~--~~~~--~-~i~~t~d~~ 109 (270)
||+|||+ |..|+++|..|+.++ + +|.++.+++ .......+.. ... .+.+ . .+..++|++
T Consensus 1 kI~VIGa-G~wGtALA~~la~ng~~~~~~~~~--~V~lw~~~~~~~~~~~~~~in~~~~n~~ylpgi~Lp~~i~at~dl~ 77 (342)
T TIGR03376 1 RVAVVGS-GNWGTAIAKIVAENARALPELFEE--SVRMWVFEEEIEGRNLTEIINTTHENVKYLPGIKLPANLVAVPDLV 77 (342)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCcccccCCc--eEEEEEeccccCCHHHHHHHHhcCCCccccCCCcCCCCeEEECCHH
Confidence 6999998 999999999999888 6 999999854 1222222221 111 1111 1 234567999
Q ss_pred HHhCCCCEEEEcC
Q 024248 110 DALTGMDIVIIPA 122 (270)
Q Consensus 110 ~al~~ADvVIi~a 122 (270)
+++++||+||++.
T Consensus 78 eal~~ADiIIlAV 90 (342)
T TIGR03376 78 EAAKGADILVFVI 90 (342)
T ss_pred HHHhcCCEEEEEC
Confidence 9999999999985
No 139
>PLN02253 xanthoxin dehydrogenase
Probab=98.08 E-value=0.00011 Score=65.60 Aligned_cols=162 Identities=17% Similarity=0.152 Sum_probs=89.1
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCccee-eeeccCCHHHHh-------CC
Q 024248 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAVVR-GFLGQQQLEDAL-------TG 114 (270)
Q Consensus 45 ~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~~~-~i~~t~d~~~al-------~~ 114 (270)
+.+++.|+||+|.+|..++..|+.+|. +|+++|++.... ...++........+. .+....++++++ ..
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~ 94 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGA--KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGT 94 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 345799999999999999999999998 999999864321 112221100000000 011111222333 36
Q ss_pred CCEEEEcCCCCCCC-C----Cc---hhhhHHhhHHHHHHHHHHHhHh---CCCCEEEEecCCCCCcHHHHHHHHHHhCCC
Q 024248 115 MDIVIIPAGVPRKP-G----MT---RDDLFNINAGIVKTLCEGIAKC---CPKAIVNLISNPVNSTVPIAAEVFKKVGTY 183 (270)
Q Consensus 115 ADvVIi~ag~~~~~-g----~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~sNPv~~~~~i~t~~~~~~sg~ 183 (270)
.|++|+++|..... . .+ ....+..|+.....+++.+.+. ...+.+++++..... .+.
T Consensus 95 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~------------~~~ 162 (280)
T PLN02253 95 LDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASA------------IGG 162 (280)
T ss_pred CCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhc------------ccC
Confidence 89999999864321 1 11 2235667766655555544432 134566666533220 022
Q ss_pred CCCCeeeechhhHHHHHHHHHHHhCCCCCccceEEEc
Q 024248 184 DPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (270)
Q Consensus 184 p~~kviG~t~ldt~r~~~~lA~~l~v~~~~v~~~V~G 220 (270)
+..-.++.++.....+.+.+++.++-.--.+++..-|
T Consensus 163 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg 199 (280)
T PLN02253 163 LGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPY 199 (280)
T ss_pred CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeC
Confidence 3334577766666677888888875433333433333
No 140
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=98.08 E-value=7.4e-05 Score=67.38 Aligned_cols=167 Identities=17% Similarity=0.109 Sum_probs=92.0
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCCh-h-HHHHhhccccCcceee----eeccCCHHHHhC--CCCEEE
Q 024248 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-G-VTADISHMDTNAVVRG----FLGQQQLEDALT--GMDIVI 119 (270)
Q Consensus 48 KI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~-~-~~~dl~~~~~~~~~~~----i~~t~d~~~al~--~ADvVI 119 (270)
||.|+||+|++|..++..|.++|. +|+++|+.... . ....+... ..+.. +....+++++++ +.|+||
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~--~V~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~d~vv 75 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGH--EVVVLDNLSNGSPEALKRGERI---TRVTFVEGDLRDRELLDRLFEEHKIDAVI 75 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCC--eEEEEeCCCccchhhhhhhccc---cceEEEECCCCCHHHHHHHHHhCCCcEEE
Confidence 689999999999999999999998 89999864321 1 11111110 01111 111123444554 689999
Q ss_pred EcCCCCCCCC--CchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCC-CCCcHHHHHHHHHHhCCCCCCCeeeechhhH
Q 024248 120 IPAGVPRKPG--MTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP-VNSTVPIAAEVFKKVGTYDPKRLLGVTMLDV 196 (270)
Q Consensus 120 i~ag~~~~~g--~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNP-v~~~~~i~t~~~~~~sg~p~~kviG~t~ldt 196 (270)
+++|...... ....+.+..|+.....+++.+.+.... .++++|.. +.... -...+.+.....+...++.++...
T Consensus 76 ~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~ss~~~~g~~--~~~~~~e~~~~~~~~~y~~sK~~~ 152 (328)
T TIGR01179 76 HFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVK-KFIFSSSAAVYGEP--SSIPISEDSPLGPINPYGRSKLMS 152 (328)
T ss_pred ECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCC-EEEEecchhhcCCC--CCCCccccCCCCCCCchHHHHHHH
Confidence 9998642211 123345678999999999998876433 34444421 10000 000000111111223456655555
Q ss_pred HHHHHHHHHH-hCCCCCccc-eEEEccC
Q 024248 197 VRANTFVAEV-LGLDPREVD-VPVVGGH 222 (270)
Q Consensus 197 ~r~~~~lA~~-l~v~~~~v~-~~V~G~h 222 (270)
.++...+++. .+++...++ +.++|.+
T Consensus 153 e~~~~~~~~~~~~~~~~ilR~~~v~g~~ 180 (328)
T TIGR01179 153 ERILRDLSKADPGLSYVILRYFNVAGAD 180 (328)
T ss_pred HHHHHHHHHhccCCCEEEEecCcccCCC
Confidence 5665666665 677666665 3666653
No 141
>PRK05865 hypothetical protein; Provisional
Probab=98.07 E-value=1.6e-05 Score=81.88 Aligned_cols=103 Identities=18% Similarity=0.167 Sum_probs=70.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCccee-eeeccCCHHHHhCCCCEEEEcCCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVR-GFLGQQQLEDALTGMDIVIIPAGVP 125 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~-~i~~t~d~~~al~~ADvVIi~ag~~ 125 (270)
|||.|+||+|++|++++..|+.+|+ +|+++|++.... +.. .. ..+. .+....+++++++++|+||++|+..
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~--~Vv~l~R~~~~~----~~~-~v-~~v~gDL~D~~~l~~al~~vD~VVHlAa~~ 72 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGH--EVVGIARHRPDS----WPS-SA-DFIAADIRDATAVESAMTGADVVAHCAWVR 72 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcC--EEEEEECCchhh----ccc-Cc-eEEEeeCCCHHHHHHHHhCCCEEEECCCcc
Confidence 7999999999999999999999998 999999864211 000 00 0000 1112234567788999999998653
Q ss_pred CCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCC
Q 024248 126 RKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP 165 (270)
Q Consensus 126 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNP 165 (270)
.. ....|+....++++.+++.... .++++|.+
T Consensus 73 ~~-------~~~vNv~GT~nLLeAa~~~gvk-r~V~iSS~ 104 (854)
T PRK05865 73 GR-------NDHINIDGTANVLKAMAETGTG-RIVFTSSG 104 (854)
T ss_pred cc-------hHHHHHHHHHHHHHHHHHcCCC-eEEEECCc
Confidence 21 3467888899999998876433 55656654
No 142
>PRK06482 short chain dehydrogenase; Provisional
Probab=98.07 E-value=0.00011 Score=65.35 Aligned_cols=144 Identities=12% Similarity=-0.005 Sum_probs=80.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeee-ccCC---HHHH-------hCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFL-GQQQ---LEDA-------LTGM 115 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~-~t~d---~~~a-------l~~A 115 (270)
++|.|+||+|++|+.++..|+.+|. .|++++++... ..++.... ...+..+. .-+| ++++ +...
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~--~v~~~~r~~~~--~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 77 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD--RVAATVRRPDA--LDDLKARY-GDRLWVLQLDVTDSAAVRAVVDRAFAALGRI 77 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC--EEEEEeCCHHH--HHHHHHhc-cCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4799999999999999999999998 89999886431 11111110 00111000 0112 2222 3457
Q ss_pred CEEEEcCCCCCCCC-C--c---hhhhHHhhHHHHHHHHHHHhHh---CCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCC
Q 024248 116 DIVIIPAGVPRKPG-M--T---RDDLFNINAGIVKTLCEGIAKC---CPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPK 186 (270)
Q Consensus 116 DvVIi~ag~~~~~g-~--~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~ 186 (270)
|+||+++|...... . + ....+..|+.....+++.+.++ .....++++|.-... .+.|..
T Consensus 78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~------------~~~~~~ 145 (276)
T PRK06482 78 DVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQ------------IAYPGF 145 (276)
T ss_pred CEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccc------------cCCCCC
Confidence 99999998653211 1 1 1234567888777777776332 233456655532210 123444
Q ss_pred CeeeechhhHHHHHHHHHHHh
Q 024248 187 RLLGVTMLDVVRANTFVAEVL 207 (270)
Q Consensus 187 kviG~t~ldt~r~~~~lA~~l 207 (270)
-.++.++.....+...+++.+
T Consensus 146 ~~Y~~sK~a~~~~~~~l~~~~ 166 (276)
T PRK06482 146 SLYHATKWGIEGFVEAVAQEV 166 (276)
T ss_pred chhHHHHHHHHHHHHHHHHHh
Confidence 456665544445666666664
No 143
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=98.06 E-value=0.00011 Score=64.54 Aligned_cols=146 Identities=16% Similarity=0.170 Sum_probs=80.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCcceee----eeccCCHHHHh-------
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAVVRG----FLGQQQLEDAL------- 112 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~~~~----i~~t~d~~~al------- 112 (270)
.+++.|+|++|++|.+++..|++.|. +|+++++++... ...++.+.. ..+.. +....++++++
T Consensus 7 ~~~vlItGasg~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 82 (262)
T PRK13394 7 GKTAVVTGAASGIGKEIALELARAGA--AVAIADLNQDGANAVADEINKAG--GKAIGVAMDVTNEDAVNAGIDKVAERF 82 (262)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHhcC--ceEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 34799999999999999999999999 999999976321 122232211 11111 11111122222
Q ss_pred CCCCEEEEcCCCCCCC---C---CchhhhHHhhHHH----HHHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCC
Q 024248 113 TGMDIVIIPAGVPRKP---G---MTRDDLFNINAGI----VKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGT 182 (270)
Q Consensus 113 ~~ADvVIi~ag~~~~~---g---~~r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg 182 (270)
...|+||+++|..... . ....+.+..|+.. .+.+++.+.+..+.+.|+++|.-.. ..+
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~------------~~~ 150 (262)
T PRK13394 83 GSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHS------------HEA 150 (262)
T ss_pred CCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhh------------cCC
Confidence 3589999999864211 1 1122344566665 5666666633334456666553211 012
Q ss_pred CCCCCeeeechhhHHHHHHHHHHHh
Q 024248 183 YDPKRLLGVTMLDVVRANTFVAEVL 207 (270)
Q Consensus 183 ~p~~kviG~t~ldt~r~~~~lA~~l 207 (270)
.|..-.++.++.....+-+.+++.+
T Consensus 151 ~~~~~~y~~sk~a~~~~~~~la~~~ 175 (262)
T PRK13394 151 SPLKSAYVTAKHGLLGLARVLAKEG 175 (262)
T ss_pred CCCCcccHHHHHHHHHHHHHHHHHh
Confidence 3333445655444444555566664
No 144
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=98.05 E-value=8.8e-05 Score=68.52 Aligned_cols=99 Identities=19% Similarity=0.184 Sum_probs=62.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhcccc------C-c---ceeeeeccCCHHHHhCCC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT------N-A---VVRGFLGQQQLEDALTGM 115 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~------~-~---~~~~i~~t~d~~~al~~A 115 (270)
.|||+|+|+ |.+|+.++..|+..|+ +|.++|+++.. ..+..... . . ....+..+++. ++++++
T Consensus 2 ~mkI~IiG~-G~mG~~~A~~L~~~G~--~V~~~~r~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 74 (341)
T PRK08229 2 MARICVLGA-GSIGCYLGGRLAAAGA--DVTLIGRARIG---DELRAHGLTLTDYRGRDVRVPPSAIAFSTDP-AALATA 74 (341)
T ss_pred CceEEEECC-CHHHHHHHHHHHhcCC--cEEEEecHHHH---HHHHhcCceeecCCCcceecccceeEeccCh-hhccCC
Confidence 379999998 9999999999999998 99999985321 11111000 0 0 00112234565 578999
Q ss_pred CEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHh-CCCCEEEEecCCCC
Q 024248 116 DIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKC-CPKAIVNLISNPVN 167 (270)
Q Consensus 116 DvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~sNPv~ 167 (270)
|+||++...+. ..++++.+... .++.+|+..+|..+
T Consensus 75 D~vil~vk~~~----------------~~~~~~~l~~~~~~~~iii~~~nG~~ 111 (341)
T PRK08229 75 DLVLVTVKSAA----------------TADAAAALAGHARPGAVVVSFQNGVR 111 (341)
T ss_pred CEEEEEecCcc----------------hHHHHHHHHhhCCCCCEEEEeCCCCC
Confidence 99999874321 12334455544 35677777788776
No 145
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=98.04 E-value=0.0001 Score=64.65 Aligned_cols=155 Identities=14% Similarity=0.134 Sum_probs=81.9
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhcc-ccCcc-ee-eeeccCCHHH-------HhCCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM-DTNAV-VR-GFLGQQQLED-------ALTGMD 116 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~-~~~~~-~~-~i~~t~d~~~-------al~~AD 116 (270)
|+|.|+||+|.+|..++..|+.+|. +|+++++++.... .+... ..... +. .+....++++ .+.+.|
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~--~V~~~~r~~~~~~--~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id 76 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGH--KVIATGRRQERLQ--ELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNID 76 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC--EEEEEECCHHHHH--HHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 6899999999999999999999998 9999999753211 11110 00000 00 0111111222 234799
Q ss_pred EEEEcCCCCCC--C--CCch---hhhHHhhHHHHHHHHHHHhHh---CCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCC
Q 024248 117 IVIIPAGVPRK--P--GMTR---DDLFNINAGIVKTLCEGIAKC---CPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPK 186 (270)
Q Consensus 117 vVIi~ag~~~~--~--g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~ 186 (270)
+||+++|.... + ..+. .+.+..|+.....+.+.+.++ ...+.++++|..... .+++..
T Consensus 77 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~------------~~~~~~ 144 (248)
T PRK10538 77 VLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGS------------WPYAGG 144 (248)
T ss_pred EEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccC------------CCCCCC
Confidence 99999986421 1 1121 234566666544444444332 223456666643221 123334
Q ss_pred CeeeechhhHHHHHHHHHHHhCCCCCccceEEE
Q 024248 187 RLLGVTMLDVVRANTFVAEVLGLDPREVDVPVV 219 (270)
Q Consensus 187 kviG~t~ldt~r~~~~lA~~l~v~~~~v~~~V~ 219 (270)
..++.++.....+-..++..++ +..+++.++
T Consensus 145 ~~Y~~sK~~~~~~~~~l~~~~~--~~~i~v~~v 175 (248)
T PRK10538 145 NVYGATKAFVRQFSLNLRTDLH--GTAVRVTDI 175 (248)
T ss_pred chhHHHHHHHHHHHHHHHHHhc--CCCcEEEEE
Confidence 4566644333445566666654 334544433
No 146
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=98.04 E-value=3.7e-05 Score=70.88 Aligned_cols=72 Identities=25% Similarity=0.404 Sum_probs=50.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccc---c---Cccee-eeeccCCHHHHhCCCCEE
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD---T---NAVVR-GFLGQQQLEDALTGMDIV 118 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~---~---~~~~~-~i~~t~d~~~al~~ADvV 118 (270)
.|||+|||+ |.+|+.++..|+..|+ +|+++|+++.... ++.... . ...+. .+..+++++++++++|+|
T Consensus 4 ~m~I~iIG~-G~mG~~ia~~L~~~G~--~V~~~~r~~~~~~--~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~aD~V 78 (328)
T PRK14618 4 GMRVAVLGA-GAWGTALAVLAASKGV--PVRLWARRPEFAA--ALAAERENREYLPGVALPAELYPTADPEEALAGADFA 78 (328)
T ss_pred CCeEEEECc-CHHHHHHHHHHHHCCC--eEEEEeCCHHHHH--HHHHhCcccccCCCCcCCCCeEEeCCHHHHHcCCCEE
Confidence 579999998 9999999999999998 9999999753221 122110 0 00000 022355787888999999
Q ss_pred EEcC
Q 024248 119 IIPA 122 (270)
Q Consensus 119 Ii~a 122 (270)
|++.
T Consensus 79 i~~v 82 (328)
T PRK14618 79 VVAV 82 (328)
T ss_pred EEEC
Confidence 9986
No 147
>PRK12829 short chain dehydrogenase; Provisional
Probab=98.03 E-value=0.00019 Score=62.97 Aligned_cols=149 Identities=20% Similarity=0.248 Sum_probs=79.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhH--HHHhhccccCcceeeeeccCCHHH-------HhCCC
Q 024248 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV--TADISHMDTNAVVRGFLGQQQLED-------ALTGM 115 (270)
Q Consensus 45 ~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~--~~dl~~~~~~~~~~~i~~t~d~~~-------al~~A 115 (270)
+.+++.|+||+|.+|..++..|+++|+ +|+++++++.... ..++.........-.+....++.+ .+.++
T Consensus 10 ~~~~vlItGa~g~iG~~~a~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 87 (264)
T PRK12829 10 DGLRVLVTGGASGIGRAIAEAFAEAGA--RVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGL 87 (264)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 446999999999999999999999999 8999999753211 111111100000000111111212 23578
Q ss_pred CEEEEcCCCCCCCCC----c---hhhhHHhhHHHHHHHHHHH----hHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCCC
Q 024248 116 DIVIIPAGVPRKPGM----T---RDDLFNINAGIVKTLCEGI----AKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYD 184 (270)
Q Consensus 116 DvVIi~ag~~~~~g~----~---r~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p 184 (270)
|+||+++|.....+. + -...+..|......+.+.+ .+......++++|..... .++|
T Consensus 88 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~------------~~~~ 155 (264)
T PRK12829 88 DVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGR------------LGYP 155 (264)
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccc------------cCCC
Confidence 999999986522211 1 1233456665555555554 332222455555432210 1344
Q ss_pred CCCeeeechhhHHHHHHHHHHHh
Q 024248 185 PKRLLGVTMLDVVRANTFVAEVL 207 (270)
Q Consensus 185 ~~kviG~t~ldt~r~~~~lA~~l 207 (270)
..-.++.++-....+...+++.+
T Consensus 156 ~~~~y~~~K~a~~~~~~~l~~~~ 178 (264)
T PRK12829 156 GRTPYAASKWAVVGLVKSLAIEL 178 (264)
T ss_pred CCchhHHHHHHHHHHHHHHHHHH
Confidence 44445555444445666666665
No 148
>PRK05717 oxidoreductase; Validated
Probab=98.02 E-value=0.0001 Score=64.86 Aligned_cols=146 Identities=15% Similarity=0.148 Sum_probs=85.2
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHH--HHhhccccCcce-e-eeeccCCHHHH-------hCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVT--ADISHMDTNAVV-R-GFLGQQQLEDA-------LTGM 115 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~--~dl~~~~~~~~~-~-~i~~t~d~~~a-------l~~A 115 (270)
++|.|+||+|++|.+++..|+..|. +|+++|++...... .++.. .... . .+....+++++ +...
T Consensus 11 k~vlItG~sg~IG~~~a~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 85 (255)
T PRK05717 11 RVALVTGAARGIGLGIAAWLIAEGW--QVVLADLDRERGSKVAKALGE---NAWFIAMDVADEAQVAAGVAEVLGQFGRL 85 (255)
T ss_pred CEEEEeCCcchHHHHHHHHHHHcCC--EEEEEcCCHHHHHHHHHHcCC---ceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 4799999999999999999999998 99999986532211 11110 0000 0 01111111111 2357
Q ss_pred CEEEEcCCCCCCCC-----Cc---hhhhHHhhHHHHHHHHHHHhHhC--CCCEEEEecCCCCCcHHHHHHHHHHhCCCCC
Q 024248 116 DIVIIPAGVPRKPG-----MT---RDDLFNINAGIVKTLCEGIAKCC--PKAIVNLISNPVNSTVPIAAEVFKKVGTYDP 185 (270)
Q Consensus 116 DvVIi~ag~~~~~g-----~~---r~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~ 185 (270)
|++|+++|...... .+ ....+..|+.....+++.+.++. ..+.++++|..... .+.+.
T Consensus 86 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~------------~~~~~ 153 (255)
T PRK05717 86 DALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRAR------------QSEPD 153 (255)
T ss_pred CEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhc------------CCCCC
Confidence 99999998653211 11 12456788877777777776432 34566666543221 12233
Q ss_pred CCeeeechhhHHHHHHHHHHHhCC
Q 024248 186 KRLLGVTMLDVVRANTFVAEVLGL 209 (270)
Q Consensus 186 ~kviG~t~ldt~r~~~~lA~~l~v 209 (270)
.-.++.++.....+.+.+++.++-
T Consensus 154 ~~~Y~~sKaa~~~~~~~la~~~~~ 177 (255)
T PRK05717 154 TEAYAASKGGLLALTHALAISLGP 177 (255)
T ss_pred CcchHHHHHHHHHHHHHHHHHhcC
Confidence 344666655555677888888764
No 149
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=98.02 E-value=4.6e-05 Score=67.25 Aligned_cols=114 Identities=17% Similarity=0.110 Sum_probs=67.9
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCccee--eeec-cCCHHHHh-CCCCEE
Q 024248 43 GSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVR--GFLG-QQQLEDAL-TGMDIV 118 (270)
Q Consensus 43 ~~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~--~i~~-t~d~~~al-~~ADvV 118 (270)
+.+.|||+|+||+|++|..++..|+.+|+ +|+++.++....... +... ....+. .+.. ..++.+++ .++|+|
T Consensus 14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~-~~~~-~~~~~~~~Dl~d~~~~l~~~~~~~~d~v 89 (251)
T PLN00141 14 NVKTKTVFVAGATGRTGKRIVEQLLAKGF--AVKAGVRDVDKAKTS-LPQD-PSLQIVRADVTEGSDKLVEAIGDDSDAV 89 (251)
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhCCC--EEEEEecCHHHHHHh-cccC-CceEEEEeeCCCCHHHHHHHhhcCCCEE
Confidence 44567999999999999999999999998 898887764321110 1110 000000 0111 12344566 689999
Q ss_pred EEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEec
Q 024248 119 IIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163 (270)
Q Consensus 119 Ii~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~s 163 (270)
|+++|.....+. .+....|......+++.+.+.... .|+++|
T Consensus 90 i~~~g~~~~~~~--~~~~~~n~~~~~~ll~a~~~~~~~-~iV~iS 131 (251)
T PLN00141 90 ICATGFRRSFDP--FAPWKVDNFGTVNLVEACRKAGVT-RFILVS 131 (251)
T ss_pred EECCCCCcCCCC--CCceeeehHHHHHHHHHHHHcCCC-EEEEEc
Confidence 998875422111 122345666678888888765433 444444
No 150
>PRK06180 short chain dehydrogenase; Provisional
Probab=98.02 E-value=0.00023 Score=63.52 Aligned_cols=144 Identities=10% Similarity=0.034 Sum_probs=79.2
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceee----eeccCCHHHHh-------CCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRG----FLGQQQLEDAL-------TGM 115 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~----i~~t~d~~~al-------~~A 115 (270)
++|.|+||+|.+|.+++..|+.+|. +|++++++.... .++.... ...+.. +....++.+++ ...
T Consensus 5 ~~vlVtGasggiG~~la~~l~~~G~--~V~~~~r~~~~~--~~l~~~~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~ 79 (277)
T PRK06180 5 KTWLITGVSSGFGRALAQAALAAGH--RVVGTVRSEAAR--ADFEALH-PDRALARLLDVTDFDAIDAVVADAEATFGPI 79 (277)
T ss_pred CEEEEecCCChHHHHHHHHHHhCcC--EEEEEeCCHHHH--HHHHhhc-CCCeeEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 4799999999999999999999998 999999875321 1221110 001100 11111122222 358
Q ss_pred CEEEEcCCCCCCC---CCch---hhhHHhhHHHHHHHHHHHhHh---CCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCC
Q 024248 116 DIVIIPAGVPRKP---GMTR---DDLFNINAGIVKTLCEGIAKC---CPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPK 186 (270)
Q Consensus 116 DvVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~ 186 (270)
|+||+++|..... ..+. ...+..|+.....+.+.+... ...+.++++|.-... .+.|..
T Consensus 80 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~------------~~~~~~ 147 (277)
T PRK06180 80 DVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGL------------ITMPGI 147 (277)
T ss_pred CEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEeccccc------------CCCCCc
Confidence 9999999864211 1111 233677877777677665432 223456666643221 123334
Q ss_pred CeeeechhhHHHHHHHHHHHh
Q 024248 187 RLLGVTMLDVVRANTFVAEVL 207 (270)
Q Consensus 187 kviG~t~ldt~r~~~~lA~~l 207 (270)
-.++.++.....+.+.++..+
T Consensus 148 ~~Y~~sK~a~~~~~~~la~e~ 168 (277)
T PRK06180 148 GYYCGSKFALEGISESLAKEV 168 (277)
T ss_pred chhHHHHHHHHHHHHHHHHHh
Confidence 445554443334555566554
No 151
>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=98.02 E-value=6.3e-05 Score=69.28 Aligned_cols=100 Identities=15% Similarity=0.341 Sum_probs=64.5
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhcc--c-c-C--ccee-eeeccCCHHHHh-CCCCEE
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM--D-T-N--AVVR-GFLGQQQLEDAL-TGMDIV 118 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~--~-~-~--~~~~-~i~~t~d~~~al-~~ADvV 118 (270)
|||+|+|+ |.+|+.++..|.+.|+ +|.+++++++. ...+... . . . ..+. .+..++++++++ .++|+|
T Consensus 1 MkI~IiGa-Ga~G~ala~~L~~~g~--~V~l~~r~~~~--~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~Dli 75 (326)
T PRK14620 1 MKISILGA-GSFGTAIAIALSSKKI--SVNLWGRNHTT--FESINTKRKNLKYLPTCHLPDNISVKSAIDEVLSDNATCI 75 (326)
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCC--eEEEEecCHHH--HHHHHHcCCCcccCCCCcCCCCeEEeCCHHHHHhCCCCEE
Confidence 79999998 9999999999999998 99999997532 2222211 0 0 0 0011 122356777776 589999
Q ss_pred EEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhH-h-CCCCEEEEecCCCC
Q 024248 119 IIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAK-C-CPKAIVNLISNPVN 167 (270)
Q Consensus 119 Ii~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~-~-~p~a~viv~sNPv~ 167 (270)
|++.. ...+.++++.+.. + .++..++..+|-.+
T Consensus 76 iiavk----------------s~~~~~~l~~l~~~~l~~~~~vv~~~nGi~ 110 (326)
T PRK14620 76 ILAVP----------------TQQLRTICQQLQDCHLKKNTPILICSKGIE 110 (326)
T ss_pred EEEeC----------------HHHHHHHHHHHHHhcCCCCCEEEEEEcCee
Confidence 99862 1223455555554 3 35666777777654
No 152
>PRK08643 acetoin reductase; Validated
Probab=98.01 E-value=0.00043 Score=60.71 Aligned_cols=157 Identities=20% Similarity=0.187 Sum_probs=83.2
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCcc-ee-eeeccCCHHHH-------hCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAV-VR-GFLGQQQLEDA-------LTGM 115 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~-~~-~i~~t~d~~~a-------l~~A 115 (270)
+++.|+|++|.+|.+++..|+++|. +|+++|++.... ...++.+...... +. .+....+++++ +...
T Consensus 3 k~~lItGas~giG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 80 (256)
T PRK08643 3 KVALVTGAGQGIGFAIAKRLVEDGF--KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDL 80 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 3789999999999999999999998 999999875321 1222322110000 00 01111112222 3468
Q ss_pred CEEEEcCCCCCCCC---Cc---hhhhHHhhHHHHHH----HHHHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCCCC
Q 024248 116 DIVIIPAGVPRKPG---MT---RDDLFNINAGIVKT----LCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDP 185 (270)
Q Consensus 116 DvVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~----i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~ 185 (270)
|+||+++|...... .+ ....+..|+..... +.+.+.+..+++.++++|..... .+.|.
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~------------~~~~~ 148 (256)
T PRK08643 81 NVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGV------------VGNPE 148 (256)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccc------------cCCCC
Confidence 99999998642111 11 12234566654443 33444333345667766643321 02333
Q ss_pred CCeeeechhhHHHHHHHHHHHhCCCCCccceEEE
Q 024248 186 KRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVV 219 (270)
Q Consensus 186 ~kviG~t~ldt~r~~~~lA~~l~v~~~~v~~~V~ 219 (270)
.-.++.++.....+.+.+++.+ .+..+++.++
T Consensus 149 ~~~Y~~sK~a~~~~~~~la~e~--~~~gi~v~~i 180 (256)
T PRK08643 149 LAVYSSTKFAVRGLTQTAARDL--ASEGITVNAY 180 (256)
T ss_pred CchhHHHHHHHHHHHHHHHHHh--cccCcEEEEE
Confidence 3345555444445666677765 3444554443
No 153
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.01 E-value=0.00012 Score=63.81 Aligned_cols=36 Identities=25% Similarity=0.276 Sum_probs=32.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT 83 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~ 83 (270)
.++|+|+||+|.+|..++..|+++|+ +|++++++..
T Consensus 5 ~~~vlItGasg~iG~~l~~~l~~~G~--~V~~~~r~~~ 40 (251)
T PRK07231 5 GKVAIVTGASSGIGEGIARRFAAEGA--RVVVTDRNEE 40 (251)
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHH
Confidence 35899999999999999999999998 8999999764
No 154
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=98.01 E-value=2.6e-05 Score=71.29 Aligned_cols=168 Identities=18% Similarity=0.116 Sum_probs=97.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC-----hhHHHHhhccccCcceee----eeccCCHHHHh--CC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-----PGVTADISHMDTNAVVRG----FLGQQQLEDAL--TG 114 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~-----~~~~~dl~~~~~~~~~~~----i~~t~d~~~al--~~ 114 (270)
.++|.|+||+||||++.+..|+.+|+ +|+++|.... -..+..+.+. ...+.. +.....+++.+ ..
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy--~v~~vDNl~n~~~~sl~r~~~l~~~--~~~v~f~~~Dl~D~~~L~kvF~~~~ 77 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGY--GVVIVDNLNNSYLESLKRVRQLLGE--GKSVFFVEGDLNDAEALEKLFSEVK 77 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCC--cEEEEecccccchhHHHHHHHhcCC--CCceEEEEeccCCHHHHHHHHhhcC
Confidence 35899999999999999999999999 9999998642 1112223321 111111 11011123323 35
Q ss_pred CCEEEEcCCCCCC-CC-CchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEec-CCCCCcHH--HHHHHHHHhCCCC-CCCe
Q 024248 115 MDIVIIPAGVPRK-PG-MTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS-NPVNSTVP--IAAEVFKKVGTYD-PKRL 188 (270)
Q Consensus 115 ADvVIi~ag~~~~-~g-~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~s-NPv~~~~~--i~t~~~~~~sg~p-~~kv 188 (270)
-|-|++.|+...- +. +.+..+...|+-...++++.+++++ -..++..| -.+..... .+++- .-.. +-..
T Consensus 78 fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~-~~~~V~sssatvYG~p~~ip~te~----~~t~~p~~p 152 (343)
T KOG1371|consen 78 FDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHN-VKALVFSSSATVYGLPTKVPITEE----DPTDQPTNP 152 (343)
T ss_pred CceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcC-CceEEEecceeeecCcceeeccCc----CCCCCCCCc
Confidence 7889998764321 11 2356778899999999999999987 33333332 22222110 11111 0111 3345
Q ss_pred eeechhhHHHHHHHHHHHhCCCCCcc-ceEEEccC
Q 024248 189 LGVTMLDVVRANTFVAEVLGLDPREV-DVPVVGGH 222 (270)
Q Consensus 189 iG~t~ldt~r~~~~lA~~l~v~~~~v-~~~V~G~h 222 (270)
+|.|....+.....+.+.++.....+ ++.++|.|
T Consensus 153 yg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~ 187 (343)
T KOG1371|consen 153 YGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAH 187 (343)
T ss_pred chhhhHHHHHHHHhhhccccceEEEEEeccccCcc
Confidence 67776666667777777777666666 34555533
No 155
>PRK08267 short chain dehydrogenase; Provisional
Probab=98.00 E-value=0.00013 Score=64.28 Aligned_cols=115 Identities=22% Similarity=0.258 Sum_probs=65.1
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHH--HHhhccccCcceeeeeccCCHHHHh--------CCCCE
Q 024248 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVT--ADISHMDTNAVVRGFLGQQQLEDAL--------TGMDI 117 (270)
Q Consensus 48 KI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~--~dl~~~~~~~~~~~i~~t~d~~~al--------~~ADv 117 (270)
++.|+||+|.+|..++..|+.+|. +|+++|++...... .++.........-.+....++++++ ...|+
T Consensus 3 ~vlItGasg~iG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~ 80 (260)
T PRK08267 3 SIFITGAASGIGRATALLFAAEGW--RVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV 80 (260)
T ss_pred EEEEeCCCchHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence 599999999999999999999998 99999987542111 1111000000000011111222222 34699
Q ss_pred EEEcCCCCCCCC---Cc---hhhhHHhhHHHHHHHHHHHhHh---CCCCEEEEecC
Q 024248 118 VIIPAGVPRKPG---MT---RDDLFNINAGIVKTLCEGIAKC---CPKAIVNLISN 164 (270)
Q Consensus 118 VIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~sN 164 (270)
||+++|...... .+ ....+..|+.....+++.+.++ .+.+.++++|.
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS 136 (260)
T PRK08267 81 LFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSS 136 (260)
T ss_pred EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCc
Confidence 999998653211 11 2334667777666666555432 34455666654
No 156
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.99 E-value=0.00016 Score=63.25 Aligned_cols=115 Identities=16% Similarity=0.213 Sum_probs=64.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCcc-ee-eeeccCCHHHH-------hCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAV-VR-GFLGQQQLEDA-------LTGM 115 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~-~~-~i~~t~d~~~a-------l~~A 115 (270)
++|.|+|++|++|.+++..|+.+|+ +|++++++.... ...++........ +. .+....+++++ +.+.
T Consensus 5 ~~vlItG~sg~iG~~la~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 82 (258)
T PRK12429 5 KVALVTGAASGIGLEIALALAKEGA--KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV 82 (258)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4899999999999999999999998 999999975421 1223321110000 00 01111122222 2468
Q ss_pred CEEEEcCCCCCCCC---Cc---hhhhHHhhHHH----HHHHHHHHhHhCCCCEEEEecC
Q 024248 116 DIVIIPAGVPRKPG---MT---RDDLFNINAGI----VKTLCEGIAKCCPKAIVNLISN 164 (270)
Q Consensus 116 DvVIi~ag~~~~~g---~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~sN 164 (270)
|+||+++|...... .+ ..+.+..|+.. .+.+.+.+++.. ...|+++|.
T Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss 140 (258)
T PRK12429 83 DILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQG-GGRIINMAS 140 (258)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CeEEEEEcc
Confidence 99999998642211 11 12234455554 566666665543 345555553
No 157
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=97.98 E-value=6.3e-05 Score=67.89 Aligned_cols=165 Identities=12% Similarity=0.078 Sum_probs=87.9
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHH----hCCCCEEEEcCCC
Q 024248 49 VAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDA----LTGMDIVIIPAGV 124 (270)
Q Consensus 49 I~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~a----l~~ADvVIi~ag~ 124 (270)
|.|+||+|++|++++..|+..|+ .+|+++|+.........+........ +.....++.. +.++|+||++|+.
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~-~~v~~~~~~~~~~~~~~~~~~~~~~d---~~~~~~~~~~~~~~~~~~D~vvh~A~~ 76 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGI-TDILVVDNLRDGHKFLNLADLVIADY---IDKEDFLDRLEKGAFGKIEAIFHQGAC 76 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCC-ceEEEEecCCCchhhhhhhheeeecc---CcchhHHHHHHhhccCCCCEEEECccc
Confidence 57999999999999999999885 27888887543211111111000000 0001112222 2489999999986
Q ss_pred CCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCC-CCCcHHHHHHHHHHhCC-CCCCCeeeechhhHHHHHHH
Q 024248 125 PRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP-VNSTVPIAAEVFKKVGT-YDPKRLLGVTMLDVVRANTF 202 (270)
Q Consensus 125 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNP-v~~~~~i~t~~~~~~sg-~p~~kviG~t~ldt~r~~~~ 202 (270)
......+....+..|+.....+++.+.+... .++++|.. +.... ...+.+... ..+...+|.++.....+...
T Consensus 77 ~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~--~~v~~SS~~vy~~~---~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~ 151 (314)
T TIGR02197 77 SDTTETDGEYMMENNYQYSKRLLDWCAEKGI--PFIYASSAATYGDG---EAGFREGRELERPLNVYGYSKFLFDQYVRR 151 (314)
T ss_pred cCccccchHHHHHHHHHHHHHHHHHHHHhCC--cEEEEccHHhcCCC---CCCcccccCcCCCCCHHHHHHHHHHHHHHH
Confidence 4322223345667899999999999987643 45555531 11000 000000000 11233466665555444433
Q ss_pred HH-H-HhCCCCCccc-eEEEccC
Q 024248 203 VA-E-VLGLDPREVD-VPVVGGH 222 (270)
Q Consensus 203 lA-~-~l~v~~~~v~-~~V~G~h 222 (270)
.. + ..+++...++ +.++|..
T Consensus 152 ~~~~~~~~~~~~~lR~~~vyG~~ 174 (314)
T TIGR02197 152 RVLPEALSAQVVGLRYFNVYGPR 174 (314)
T ss_pred HhHhhccCCceEEEEEeeccCCC
Confidence 22 2 2344555554 4788865
No 158
>PRK06182 short chain dehydrogenase; Validated
Probab=97.97 E-value=0.00023 Score=63.34 Aligned_cols=114 Identities=14% Similarity=0.113 Sum_probs=65.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHh-------CCCCEE
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDAL-------TGMDIV 118 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al-------~~ADvV 118 (270)
.++|+|+|++|.+|..++..|+.+|+ +|++++++.... .++.........-.+....++++.+ .+.|++
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~G~--~V~~~~r~~~~l--~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~l 78 (273)
T PRK06182 3 KKVALVTGASSGIGKATARRLAAQGY--TVYGAARRVDKM--EDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVL 78 (273)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHH--HHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 35899999999999999999999998 999999875321 1221110000000111111233333 378999
Q ss_pred EEcCCCCCCCC---C---chhhhHHhhHHH----HHHHHHHHhHhCCCCEEEEecC
Q 024248 119 IIPAGVPRKPG---M---TRDDLFNINAGI----VKTLCEGIAKCCPKAIVNLISN 164 (270)
Q Consensus 119 Ii~ag~~~~~g---~---~r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~sN 164 (270)
|+++|...... . +....+..|+.. ++.+++.+++... +.++++|.
T Consensus 79 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-g~iv~isS 133 (273)
T PRK06182 79 VNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRS-GRIINISS 133 (273)
T ss_pred EECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCC-CEEEEEcc
Confidence 99998643211 1 122344566544 5666666665433 45665553
No 159
>PRK07774 short chain dehydrogenase; Provisional
Probab=97.97 E-value=0.00024 Score=61.93 Aligned_cols=155 Identities=17% Similarity=0.177 Sum_probs=85.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCc-cee-eeeccCCHHH-------HhCC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNA-VVR-GFLGQQQLED-------ALTG 114 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~-~~~-~i~~t~d~~~-------al~~ 114 (270)
.+++.|+|++|++|.+++..|+++|. +|+++|+++... ...++.+..... .+. .+....++++ .+..
T Consensus 6 ~k~vlItGasg~iG~~la~~l~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (250)
T PRK07774 6 DKVAIVTGAAGGIGQAYAEALAREGA--SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGG 83 (250)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 35899999999999999999999998 999999975321 111222111000 010 0111111111 2246
Q ss_pred CCEEEEcCCCCCC--C----CCc---hhhhHHhhHHHHHHHHHHHhHhC---CCCEEEEecCCCCCcHHHHHHHHHHhCC
Q 024248 115 MDIVIIPAGVPRK--P----GMT---RDDLFNINAGIVKTLCEGIAKCC---PKAIVNLISNPVNSTVPIAAEVFKKVGT 182 (270)
Q Consensus 115 ADvVIi~ag~~~~--~----g~~---r~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~sNPv~~~~~i~t~~~~~~sg 182 (270)
.|+||+++|.... + ..+ ..+.+..|+.....+.+.+.++. ..+.++++|.-..
T Consensus 84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~--------------- 148 (250)
T PRK07774 84 IDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAA--------------- 148 (250)
T ss_pred CCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccc---------------
Confidence 8999999986421 1 111 12345677776666666665542 2356666653211
Q ss_pred CCCCCeeeechhhHHHHHHHHHHHhCCCCCccceEEE
Q 024248 183 YDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVV 219 (270)
Q Consensus 183 ~p~~kviG~t~ldt~r~~~~lA~~l~v~~~~v~~~V~ 219 (270)
+++.-.++.++.....+.+.+++.+.- ..+.+.++
T Consensus 149 ~~~~~~Y~~sK~a~~~~~~~l~~~~~~--~~i~v~~v 183 (250)
T PRK07774 149 WLYSNFYGLAKVGLNGLTQQLARELGG--MNIRVNAI 183 (250)
T ss_pred cCCccccHHHHHHHHHHHHHHHHHhCc--cCeEEEEE
Confidence 222234566555555567777777642 34544333
No 160
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.96 E-value=0.00019 Score=64.24 Aligned_cols=112 Identities=10% Similarity=0.065 Sum_probs=64.5
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCccee-eeeccCCHHHHh--------CCCCE
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVR-GFLGQQQLEDAL--------TGMDI 117 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~-~i~~t~d~~~al--------~~ADv 117 (270)
++|.|+||+|.+|..++..|+.+|. +|++.+++.... .++..... ..+. .+....++++++ ...|+
T Consensus 5 k~vlItGasggiG~~la~~l~~~G~--~Vi~~~r~~~~~--~~l~~~~~-~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~ 79 (277)
T PRK05993 5 RSILITGCSSGIGAYCARALQSDGW--RVFATCRKEEDV--AALEAEGL-EAFQLDYAEPESIAALVAQVLELSGGRLDA 79 (277)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHH--HHHHHCCc-eEEEccCCCHHHHHHHHHHHHHHcCCCccE
Confidence 4799999999999999999999998 999999875321 11211100 0000 011111122222 24699
Q ss_pred EEEcCCCCCCCC---Cc---hhhhHHhhHHH----HHHHHHHHhHhCCCCEEEEecC
Q 024248 118 VIIPAGVPRKPG---MT---RDDLFNINAGI----VKTLCEGIAKCCPKAIVNLISN 164 (270)
Q Consensus 118 VIi~ag~~~~~g---~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~sN 164 (270)
+|.++|...... .+ ....+..|+.. .+.+++.+++.. .+.|+++|.
T Consensus 80 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~-~g~iv~isS 135 (277)
T PRK05993 80 LFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG-QGRIVQCSS 135 (277)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC-CCEEEEECC
Confidence 999988643211 11 12345667655 566666666543 345666653
No 161
>PRK07856 short chain dehydrogenase; Provisional
Probab=97.95 E-value=0.00025 Score=62.22 Aligned_cols=146 Identities=11% Similarity=0.065 Sum_probs=82.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHh-------CCCCEE
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDAL-------TGMDIV 118 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al-------~~ADvV 118 (270)
.+++.|+||+|.+|..++..|+..|. +|+++|++... . ..........-.+....++++.+ ...|+|
T Consensus 6 ~k~~lItGas~gIG~~la~~l~~~g~--~v~~~~r~~~~-~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 79 (252)
T PRK07856 6 GRVVLVTGGTRGIGAGIARAFLAAGA--TVVVCGRRAPE-T---VDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVL 79 (252)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCChhh-h---hcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 45899999999999999999999998 99999987532 0 00000000000011111222222 356999
Q ss_pred EEcCCCCCCCC---Cc---hhhhHHhhHHHHHHHHHHHhHh----CCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCe
Q 024248 119 IIPAGVPRKPG---MT---RDDLFNINAGIVKTLCEGIAKC----CPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRL 188 (270)
Q Consensus 119 Ii~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i~~~----~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kv 188 (270)
|+++|...... .+ ....+..|+.....+++.+.+. ...+.++++|.-... .+.|..-.
T Consensus 80 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~------------~~~~~~~~ 147 (252)
T PRK07856 80 VNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGR------------RPSPGTAA 147 (252)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccC------------CCCCCCch
Confidence 99998642111 11 2234567777666666665432 223566666643221 12333344
Q ss_pred eeechhhHHHHHHHHHHHhCC
Q 024248 189 LGVTMLDVVRANTFVAEVLGL 209 (270)
Q Consensus 189 iG~t~ldt~r~~~~lA~~l~v 209 (270)
++.++.....+.+.++..++-
T Consensus 148 Y~~sK~a~~~l~~~la~e~~~ 168 (252)
T PRK07856 148 YGAAKAGLLNLTRSLAVEWAP 168 (252)
T ss_pred hHHHHHHHHHHHHHHHHHhcC
Confidence 555555555677778887753
No 162
>PRK08278 short chain dehydrogenase; Provisional
Probab=97.94 E-value=0.00049 Score=61.43 Aligned_cols=161 Identities=16% Similarity=0.160 Sum_probs=90.4
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh---------HHHHhhccccCcc-ee-eeeccCCHHHHh---
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG---------VTADISHMDTNAV-VR-GFLGQQQLEDAL--- 112 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~---------~~~dl~~~~~~~~-~~-~i~~t~d~~~al--- 112 (270)
+++.|+||+|++|..++..|+++|. +|++++++.... ...++........ +. .+....++++.+
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~ 84 (273)
T PRK08278 7 KTLFITGASRGIGLAIALRAARDGA--NIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKA 84 (273)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC--EEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 4799999999999999999999998 999999865310 1112221100000 00 011111222222
Q ss_pred ----CCCCEEEEcCCCCCCC---CCch---hhhHHhhHHHHHHHHHHHhHh---CCCCEEEEecCCCCCcHHHHHHHHHH
Q 024248 113 ----TGMDIVIIPAGVPRKP---GMTR---DDLFNINAGIVKTLCEGIAKC---CPKAIVNLISNPVNSTVPIAAEVFKK 179 (270)
Q Consensus 113 ----~~ADvVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~sNPv~~~~~i~t~~~~~ 179 (270)
...|++|+++|..... ..+. ...+..|+.....+++.+..+ ...+.++++|.+... .
T Consensus 85 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~----------~ 154 (273)
T PRK08278 85 VERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNL----------D 154 (273)
T ss_pred HHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhc----------c
Confidence 3689999999864211 1121 224556766666666655432 234666666643321 1
Q ss_pred hCCCCCCCeeeechhhHHHHHHHHHHHhCCCCCccceEEEcc
Q 024248 180 VGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGG 221 (270)
Q Consensus 180 ~sg~p~~kviG~t~ldt~r~~~~lA~~l~v~~~~v~~~V~G~ 221 (270)
...++..-.++.++.....+.+.+++.++ +..|++..+-.
T Consensus 155 ~~~~~~~~~Y~~sK~a~~~~~~~la~el~--~~~I~v~~i~P 194 (273)
T PRK08278 155 PKWFAPHTAYTMAKYGMSLCTLGLAEEFR--DDGIAVNALWP 194 (273)
T ss_pred ccccCCcchhHHHHHHHHHHHHHHHHHhh--hcCcEEEEEeC
Confidence 11123345577776666678888888876 34566555543
No 163
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=97.93 E-value=7.7e-05 Score=67.34 Aligned_cols=64 Identities=17% Similarity=0.224 Sum_probs=46.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh-HHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG-VTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~-~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~a 122 (270)
|||+|||. |.+|..++..|...|+ +|.++|+++... .+.+.... . ..+++. +++++||+||++.
T Consensus 1 m~I~IIG~-G~mG~sla~~L~~~g~--~V~~~d~~~~~~~~a~~~g~~------~--~~~~~~-~~~~~aDlVilav 65 (279)
T PRK07417 1 MKIGIVGL-GLIGGSLGLDLRSLGH--TVYGVSRRESTCERAIERGLV------D--EASTDL-SLLKDCDLVILAL 65 (279)
T ss_pred CeEEEEee-cHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHCCCc------c--cccCCH-hHhcCCCEEEEcC
Confidence 68999997 9999999999999998 999999875321 11111100 0 123345 5689999999996
No 164
>PRK07069 short chain dehydrogenase; Validated
Probab=97.93 E-value=0.00026 Score=61.62 Aligned_cols=153 Identities=19% Similarity=0.178 Sum_probs=83.2
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCC-CCh--hHHHHhhccccCcc---ee-eeeccCCHH-------HHhC
Q 024248 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVV-NTP--GVTADISHMDTNAV---VR-GFLGQQQLE-------DALT 113 (270)
Q Consensus 48 KI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~-~~~--~~~~dl~~~~~~~~---~~-~i~~t~d~~-------~al~ 113 (270)
||+|+|++|.+|.+++..|+.+|. +|++++++ ... ....++........ +. .+....+++ +.+.
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 78 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGA--KVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMG 78 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 589999999999999999999998 99999987 321 11122221100000 00 111111121 2234
Q ss_pred CCCEEEEcCCCCCCCC---Cc---hhhhHHhhHH----HHHHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCC
Q 024248 114 GMDIVIIPAGVPRKPG---MT---RDDLFNINAG----IVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTY 183 (270)
Q Consensus 114 ~ADvVIi~ag~~~~~g---~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~ 183 (270)
..|+||+++|...... .+ ....+..|+. .++.+.+.+++.. ...++++|..... .+.
T Consensus 79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~ss~~~~------------~~~ 145 (251)
T PRK07069 79 GLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQ-PASIVNISSVAAF------------KAE 145 (251)
T ss_pred CccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEecChhhc------------cCC
Confidence 6899999998643211 11 1233456665 6677777776543 3456655543221 012
Q ss_pred CCCCeeeechhhHHHHHHHHHHHhCCCCCccc
Q 024248 184 DPKRLLGVTMLDVVRANTFVAEVLGLDPREVD 215 (270)
Q Consensus 184 p~~kviG~t~ldt~r~~~~lA~~l~v~~~~v~ 215 (270)
+..-.++.++..-..+.+.+++.+.-....++
T Consensus 146 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~ 177 (251)
T PRK07069 146 PDYTAYNASKAAVASLTKSIALDCARRGLDVR 177 (251)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhcccCCcEE
Confidence 22233555554445566777777654333343
No 165
>PRK09135 pteridine reductase; Provisional
Probab=97.92 E-value=0.00049 Score=59.69 Aligned_cols=148 Identities=15% Similarity=0.151 Sum_probs=84.5
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCCh---hHHHHhhcccc-Ccc-ee-eeeccCCHHHHh-------C
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP---GVTADISHMDT-NAV-VR-GFLGQQQLEDAL-------T 113 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~---~~~~dl~~~~~-~~~-~~-~i~~t~d~~~al-------~ 113 (270)
++|.|+||+|++|.+++..|+++|+ +|+++++.... ....++.+... ... +. .+....++.+++ .
T Consensus 7 ~~vlItGa~g~iG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 84 (249)
T PRK09135 7 KVALITGGARRIGAAIARTLHAAGY--RVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG 84 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 5899999999999999999999998 99999985321 11122222100 000 00 011111122223 3
Q ss_pred CCCEEEEcCCCCCCC--C----CchhhhHHhhHHHHHHHHHHHhHhCC--CCEEEEecCCCCCcHHHHHHHHHHhCCCCC
Q 024248 114 GMDIVIIPAGVPRKP--G----MTRDDLFNINAGIVKTLCEGIAKCCP--KAIVNLISNPVNSTVPIAAEVFKKVGTYDP 185 (270)
Q Consensus 114 ~ADvVIi~ag~~~~~--g----~~r~~~~~~N~~i~~~i~~~i~~~~p--~a~viv~sNPv~~~~~i~t~~~~~~sg~p~ 185 (270)
..|+||+++|..... . .+..+.+..|+.....+.+.+.++-. .+.++..+. .. ....+++
T Consensus 85 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~-~~-----------~~~~~~~ 152 (249)
T PRK09135 85 RLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITD-IH-----------AERPLKG 152 (249)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeC-hh-----------hcCCCCC
Confidence 579999999853211 1 11234567788877777777765321 234443332 11 1123455
Q ss_pred CCeeeechhhHHHHHHHHHHHhC
Q 024248 186 KRLLGVTMLDVVRANTFVAEVLG 208 (270)
Q Consensus 186 ~kviG~t~ldt~r~~~~lA~~l~ 208 (270)
...++.++.....+...+++.++
T Consensus 153 ~~~Y~~sK~~~~~~~~~l~~~~~ 175 (249)
T PRK09135 153 YPVYCAAKAALEMLTRSLALELA 175 (249)
T ss_pred chhHHHHHHHHHHHHHHHHHHHC
Confidence 55677777666667777777764
No 166
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=97.92 E-value=0.00026 Score=62.21 Aligned_cols=146 Identities=17% Similarity=0.146 Sum_probs=83.1
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhH--HHHhhccccCccee-eeeccCCHHHH-------hCCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV--TADISHMDTNAVVR-GFLGQQQLEDA-------LTGMD 116 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~--~~dl~~~~~~~~~~-~i~~t~d~~~a-------l~~AD 116 (270)
.++.|+|++|.+|..++..|+++|. +|+++|++..... ..++... . ..+. .+....+++++ +...|
T Consensus 7 ~~vlItGas~~iG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~-~-~~~~~D~~~~~~~~~~~~~~~~~~~~id 82 (257)
T PRK07067 7 KVALLTGAASGIGEAVAERYLAEGA--RVVIADIKPARARLAALEIGPA-A-IAVSLDVTRQDSIDRIVAAAVERFGGID 82 (257)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCC--EEEEEcCCHHHHHHHHHHhCCc-e-EEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 4799999999999999999999998 9999999764221 1122110 0 0000 01111122222 34689
Q ss_pred EEEEcCCCCCCCC---C---chhhhHHhhHHHHHHHHHHHhHh----CCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCC
Q 024248 117 IVIIPAGVPRKPG---M---TRDDLFNINAGIVKTLCEGIAKC----CPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPK 186 (270)
Q Consensus 117 vVIi~ag~~~~~g---~---~r~~~~~~N~~i~~~i~~~i~~~----~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~ 186 (270)
++|+++|...... . +....+..|+.....+++.+.+. ...+.++++|..... .+.|..
T Consensus 83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~------------~~~~~~ 150 (257)
T PRK07067 83 ILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGR------------RGEALV 150 (257)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhC------------CCCCCC
Confidence 9999988542111 1 12234667777766666666443 234566666643221 123444
Q ss_pred CeeeechhhHHHHHHHHHHHhC
Q 024248 187 RLLGVTMLDVVRANTFVAEVLG 208 (270)
Q Consensus 187 kviG~t~ldt~r~~~~lA~~l~ 208 (270)
-.++.++.....+.+.+++.+.
T Consensus 151 ~~Y~~sK~a~~~~~~~la~e~~ 172 (257)
T PRK07067 151 SHYCATKAAVISYTQSAALALI 172 (257)
T ss_pred chhhhhHHHHHHHHHHHHHHhc
Confidence 4566655444556677777653
No 167
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=97.91 E-value=0.00036 Score=61.28 Aligned_cols=147 Identities=15% Similarity=0.083 Sum_probs=82.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCcceee----eeccCCHHHH-------h
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAVVRG----FLGQQQLEDA-------L 112 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~~~~----i~~t~d~~~a-------l 112 (270)
.++|.|+||+|.+|..++..|+.+|+ +|++.|+++... ....+.... ..+.. +....+++++ +
T Consensus 10 ~k~vlItGa~g~iG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~i~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (255)
T PRK07523 10 GRRALVTGSSQGIGYALAEGLAQAGA--EVILNGRDPAKLAAAAESLKGQG--LSAHALAFDVTDHDAVRAAIDAFEAEI 85 (255)
T ss_pred CCEEEEECCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhcC--ceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence 35899999999999999999999998 999999875321 111222110 01110 1111122222 3
Q ss_pred CCCCEEEEcCCCCCCCC---Cc---hhhhHHhhHHHHHHHHHHHhHhC---CCCEEEEecCCCCCcHHHHHHHHHHhCCC
Q 024248 113 TGMDIVIIPAGVPRKPG---MT---RDDLFNINAGIVKTLCEGIAKCC---PKAIVNLISNPVNSTVPIAAEVFKKVGTY 183 (270)
Q Consensus 113 ~~ADvVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~sNPv~~~~~i~t~~~~~~sg~ 183 (270)
...|+||+++|...... .+ -...+..|+.....+++.+.++. ..+.++++|..... .+.
T Consensus 86 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~------------~~~ 153 (255)
T PRK07523 86 GPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSA------------LAR 153 (255)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhc------------cCC
Confidence 45799999998642111 11 12345677776666666665542 34566666643321 023
Q ss_pred CCCCeeeechhhHHHHHHHHHHHhC
Q 024248 184 DPKRLLGVTMLDVVRANTFVAEVLG 208 (270)
Q Consensus 184 p~~kviG~t~ldt~r~~~~lA~~l~ 208 (270)
|..-.++.++.....+.+.++..++
T Consensus 154 ~~~~~y~~sK~a~~~~~~~~a~e~~ 178 (255)
T PRK07523 154 PGIAPYTATKGAVGNLTKGMATDWA 178 (255)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHhh
Confidence 3333455554444456666776653
No 168
>PRK08655 prephenate dehydrogenase; Provisional
Probab=97.91 E-value=0.00011 Score=70.58 Aligned_cols=66 Identities=24% Similarity=0.330 Sum_probs=48.6
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~a 122 (270)
|||+||||+|.+|..++..|...|+ +|.++|+++... .++.... .+ ..+++.++++.+||+||+++
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~--~V~v~~r~~~~~--~~~a~~~---gv---~~~~~~~e~~~~aDvVIlav 66 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGF--EVIVTGRDPKKG--KEVAKEL---GV---EYANDNIDAAKDADIVIISV 66 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCC--EEEEEECChHHH--HHHHHHc---CC---eeccCHHHHhccCCEEEEec
Confidence 7999998669999999999999998 999999875322 1111110 01 12446778899999999986
No 169
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=97.91 E-value=0.00024 Score=62.46 Aligned_cols=117 Identities=13% Similarity=0.152 Sum_probs=64.9
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCcceeeee-ccCC---HHHH-------hC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAVVRGFL-GQQQ---LEDA-------LT 113 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~~~~i~-~t~d---~~~a-------l~ 113 (270)
.+|.|+|++|.+|.+++..|+++|. +|+++|++.... ...++........+..+. ..++ .+.+ +.
T Consensus 3 k~ilItG~~~~IG~~la~~l~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~ 80 (259)
T PRK12384 3 QVAVVIGGGQTLGAFLCHGLAEEGY--RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFG 80 (259)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3799999999999999999999998 999999875321 111222110001111110 1112 2222 24
Q ss_pred CCCEEEEcCCCCCCCC---Cch---hhhHHhhHHHH----HHHHHHHhHhCCCCEEEEecCC
Q 024248 114 GMDIVIIPAGVPRKPG---MTR---DDLFNINAGIV----KTLCEGIAKCCPKAIVNLISNP 165 (270)
Q Consensus 114 ~ADvVIi~ag~~~~~g---~~r---~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~sNP 165 (270)
..|+||+++|...... .+. ...+..|+... +.+.+.+.+..+++.++++|..
T Consensus 81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~ 142 (259)
T PRK12384 81 RVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSK 142 (259)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCc
Confidence 5799999998653211 111 22345566543 4444544443334567766654
No 170
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=97.91 E-value=5.5e-05 Score=59.77 Aligned_cols=111 Identities=20% Similarity=0.258 Sum_probs=65.4
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhcc--ccCcceeeeeccCCHHHHhCCCCEEEEcCCCC
Q 024248 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM--DTNAVVRGFLGQQQLEDALTGMDIVIIPAGVP 125 (270)
Q Consensus 48 KI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~--~~~~~~~~i~~t~d~~~al~~ADvVIi~ag~~ 125 (270)
||+|+||+|++|..++.+|...+.++-+.+++.....++...-... .....+. +. ..+. +.+.++|+||.+.+
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~-~~~~-~~~~~~Dvvf~a~~-- 75 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLS-VE-DADP-EELSDVDVVFLALP-- 75 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEB-EE-ETSG-HHHTTESEEEE-SC--
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhcccccccccee-Ee-ecch-hHhhcCCEEEecCc--
Confidence 7999999999999999999998877777777776533322211111 0011111 11 1344 56899999999852
Q ss_pred CCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeeeechh
Q 024248 126 RKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGVTML 194 (270)
Q Consensus 126 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG~t~l 194 (270)
....+++++.+.+ .+.++ +.+..+. .+.++.++|+..+
T Consensus 76 --------------~~~~~~~~~~~~~--~g~~V--iD~s~~~-------------R~~~~~~~~~pev 113 (121)
T PF01118_consen 76 --------------HGASKELAPKLLK--AGIKV--IDLSGDF-------------RLDDDVPYGLPEV 113 (121)
T ss_dssp --------------HHHHHHHHHHHHH--TTSEE--EESSSTT-------------TTSTTSEEE-HHH
T ss_pred --------------hhHHHHHHHHHhh--CCcEE--EeCCHHH-------------hCCCCCCEEeCCc
Confidence 1233556666643 33444 4444442 2556778888544
No 171
>PRK12439 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.91 E-value=0.00013 Score=67.93 Aligned_cols=114 Identities=16% Similarity=0.148 Sum_probs=70.8
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhcc----ccCc-c--e-eeeeccCCHHHHhCCCC
Q 024248 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM----DTNA-V--V-RGFLGQQQLEDALTGMD 116 (270)
Q Consensus 45 ~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~----~~~~-~--~-~~i~~t~d~~~al~~AD 116 (270)
+.|||+|+|+ |.+|+.++..|+..+ +++++.+++.. ..++... ...+ . + ..+..++|++++++++|
T Consensus 6 ~~mkI~IiGa-Ga~G~alA~~La~~g---~v~l~~~~~~~--~~~i~~~~~~~~~l~~~~~l~~~i~~t~d~~~a~~~aD 79 (341)
T PRK12439 6 REPKVVVLGG-GSWGTTVASICARRG---PTLQWVRSAET--ADDINDNHRNSRYLGNDVVLSDTLRATTDFAEAANCAD 79 (341)
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCC---CEEEEeCCHHH--HHHHHhcCCCcccCCCCcccCCCeEEECCHHHHHhcCC
Confidence 4579999998 999999999999887 46777765432 2222211 0001 1 1 11334678888899999
Q ss_pred EEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhC-CCCEEEEecCCCCCcH-HHHHHHHHHh
Q 024248 117 IVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTV-PIAAEVFKKV 180 (270)
Q Consensus 117 vVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~sNPv~~~~-~i~t~~~~~~ 180 (270)
+||++.. ...+.++++.+..+. ++..++.++|-.+..+ -.+++.+.+.
T Consensus 80 lVilavp----------------s~~~~~vl~~i~~~l~~~~~vIsl~kGi~~~t~~~~se~i~~~ 129 (341)
T PRK12439 80 VVVMGVP----------------SHGFRGVLTELAKELRPWVPVVSLVKGLEQGTNMRMSQIIEEV 129 (341)
T ss_pred EEEEEeC----------------HHHHHHHHHHHHhhcCCCCEEEEEEeCCcCCCCCcHHHHHHHH
Confidence 9999862 123456666666543 5667777887655311 2345555553
No 172
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=97.91 E-value=1.1e-05 Score=73.14 Aligned_cols=151 Identities=19% Similarity=0.180 Sum_probs=81.6
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhC--CCCEEEEcCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALT--GMDIVIIPAGV 124 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~--~ADvVIi~ag~ 124 (270)
|||.|+|++|++|+.+...|..+++ +++.+++.. .|+.+.. .+.+.++ ..|+||++|+.
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~--~v~~~~r~~-----~dl~d~~------------~~~~~~~~~~pd~Vin~aa~ 61 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGY--EVIATSRSD-----LDLTDPE------------AVAKLLEAFKPDVVINCAAY 61 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSE--EEEEESTTC-----S-TTSHH------------HHHHHHHHH--SEEEE----
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCC--EEEEeCchh-----cCCCCHH------------HHHHHHHHhCCCeEecccee
Confidence 8999999999999999999999888 899997652 2333321 1112222 58999999876
Q ss_pred CCCC--CCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEec-CCCCCcHHHHHHHHHHhCCCCCCCeeeechhhHHHHHH
Q 024248 125 PRKP--GMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS-NPVNSTVPIAAEVFKKVGTYDPKRLLGVTMLDVVRANT 201 (270)
Q Consensus 125 ~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~s-NPv~~~~~i~t~~~~~~sg~p~~kviG~t~ldt~r~~~ 201 (270)
.... ..........|......+++.+.+. ++.+|.+| .-|.--. -..-+.+..--.|..++|-+++..+++-.
T Consensus 62 ~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~--~~~li~~STd~VFdG~--~~~~y~E~d~~~P~~~YG~~K~~~E~~v~ 137 (286)
T PF04321_consen 62 TNVDACEKNPEEAYAINVDATKNLAEACKER--GARLIHISTDYVFDGD--KGGPYTEDDPPNPLNVYGRSKLEGEQAVR 137 (286)
T ss_dssp --HHHHHHSHHHHHHHHTHHHHHHHHHHHHC--T-EEEEEEEGGGS-SS--TSSSB-TTS----SSHHHHHHHHHHHHHH
T ss_pred ecHHhhhhChhhhHHHhhHHHHHHHHHHHHc--CCcEEEeeccEEEcCC--cccccccCCCCCCCCHHHHHHHHHHHHHH
Confidence 4211 0123345678899999999999864 45666554 3221000 00000011111234567778777654433
Q ss_pred HHHHHhCCCCCccce-EEEccCCC
Q 024248 202 FVAEVLGLDPREVDV-PVVGGHAG 224 (270)
Q Consensus 202 ~lA~~l~v~~~~v~~-~V~G~hg~ 224 (270)
. ... +..-++. +++|.++.
T Consensus 138 ~---~~~-~~~IlR~~~~~g~~~~ 157 (286)
T PF04321_consen 138 A---ACP-NALILRTSWVYGPSGR 157 (286)
T ss_dssp H---H-S-SEEEEEE-SEESSSSS
T ss_pred H---hcC-CEEEEecceecccCCC
Confidence 2 222 3333354 88999765
No 173
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=97.91 E-value=7.9e-05 Score=69.62 Aligned_cols=178 Identities=19% Similarity=0.176 Sum_probs=100.1
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC-hhHHHHhhccccCccee----eeeccCCHHHHhCCCCEEE
Q 024248 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTNAVVR----GFLGQQQLEDALTGMDIVI 119 (270)
Q Consensus 45 ~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~-~~~~~dl~~~~~~~~~~----~i~~t~d~~~al~~ADvVI 119 (270)
+..+++|+||+||+|.+++..|.+++...+|.++|.... .....+.... ....+. .+....++..|++++ .|+
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~-~~~~v~~~~~D~~~~~~i~~a~~~~-~Vv 80 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGF-RSGRVTVILGDLLDANSISNAFQGA-VVV 80 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcc-cCCceeEEecchhhhhhhhhhccCc-eEE
Confidence 445899999999999999999999985569999999753 1111111110 011111 122233567889999 777
Q ss_pred EcCCCCC-CCCC-chhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCC--CCCcHHHHHHHHHHhCCCCCCC---eeeec
Q 024248 120 IPAGVPR-KPGM-TRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP--VNSTVPIAAEVFKKVGTYDPKR---LLGVT 192 (270)
Q Consensus 120 i~ag~~~-~~g~-~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNP--v~~~~~i~t~~~~~~sg~p~~k---viG~t 192 (270)
+++..+. .... .+......|++..+++++.+.+.+-+ .+|+.|+. +....++.. ..+...+| .+ .++-+
T Consensus 81 h~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~-~lIYtSs~~Vvf~g~~~~n--~~E~~p~p-~~~~d~Y~~s 156 (361)
T KOG1430|consen 81 HCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVK-RLIYTSSAYVVFGGEPIIN--GDESLPYP-LKHIDPYGES 156 (361)
T ss_pred EeccccCccccccchhhheeecchhHHHHHHHHHHhCCC-EEEEecCceEEeCCeeccc--CCCCCCCc-cccccccchH
Confidence 7654432 2222 35566788999999999999987533 34433332 110001000 01111233 23 34556
Q ss_pred hhhHHHHHHHHHHHhCCCCCccce-EEEccCCCCceee
Q 024248 193 MLDVVRANTFVAEVLGLDPREVDV-PVVGGHAGVTILP 229 (270)
Q Consensus 193 ~ldt~r~~~~lA~~l~v~~~~v~~-~V~G~hg~~~~vp 229 (270)
+...+++-...+..-++.+..++. .++|+ |+...+|
T Consensus 157 Ka~aE~~Vl~an~~~~l~T~aLR~~~IYGp-gd~~~~~ 193 (361)
T KOG1430|consen 157 KALAEKLVLEANGSDDLYTCALRPPGIYGP-GDKRLLP 193 (361)
T ss_pred HHHHHHHHHHhcCCCCeeEEEEccccccCC-CCccccH
Confidence 666555544433333355666654 77786 4644544
No 174
>PRK06179 short chain dehydrogenase; Provisional
Probab=97.91 E-value=0.00018 Score=63.64 Aligned_cols=111 Identities=16% Similarity=0.126 Sum_probs=63.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHh-------CCCCEEE
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDAL-------TGMDIVI 119 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al-------~~ADvVI 119 (270)
.+|.|+||+|.+|.+++..|+.+|. +|++.+++...... .... .... -.+....++++++ ...|+||
T Consensus 5 ~~vlVtGasg~iG~~~a~~l~~~g~--~V~~~~r~~~~~~~--~~~~-~~~~-~D~~d~~~~~~~~~~~~~~~g~~d~li 78 (270)
T PRK06179 5 KVALVTGASSGIGRATAEKLARAGY--RVFGTSRNPARAAP--IPGV-ELLE-LDVTDDASVQAAVDEVIARAGRIDVLV 78 (270)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC--EEEEEeCChhhccc--cCCC-eeEE-eecCCHHHHHHHHHHHHHhCCCCCEEE
Confidence 4799999999999999999999998 99999987432110 0000 0000 0011111233333 3579999
Q ss_pred EcCCCCCCCCC---c---hhhhHHhhHHHHHHHHHH----HhHhCCCCEEEEecC
Q 024248 120 IPAGVPRKPGM---T---RDDLFNINAGIVKTLCEG----IAKCCPKAIVNLISN 164 (270)
Q Consensus 120 i~ag~~~~~g~---~---r~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~sN 164 (270)
.++|....... + ....+..|......+.+. +++.. .+.|+++|.
T Consensus 79 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~isS 132 (270)
T PRK06179 79 NNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG-SGRIINISS 132 (270)
T ss_pred ECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEECC
Confidence 99987532111 1 233456666555445544 44333 345666654
No 175
>PRK07326 short chain dehydrogenase; Provisional
Probab=97.90 E-value=0.00025 Score=61.30 Aligned_cols=115 Identities=17% Similarity=0.172 Sum_probs=65.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCcceee----eeccCCHHHH-------h
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAVVRG----FLGQQQLEDA-------L 112 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~~~~----i~~t~d~~~a-------l 112 (270)
.++|+|+||+|.+|..++..|+.+|. +|++++++.... ...++... ..+.. +....++++. +
T Consensus 6 ~~~ilItGatg~iG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (237)
T PRK07326 6 GKVALITGGSKGIGFAIAEALLAEGY--KVAITARDQKELEEAAAELNNK---GNVLGLAADVRDEADVQRAVDAIVAAF 80 (237)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCC--EEEEeeCCHHHHHHHHHHHhcc---CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 35799999999999999999999888 899999875321 11223211 11111 1111122222 2
Q ss_pred CCCCEEEEcCCCCCCCC---Cch---hhhHHhhHHHHHHHHHHHhHh--CCCCEEEEecCC
Q 024248 113 TGMDIVIIPAGVPRKPG---MTR---DDLFNINAGIVKTLCEGIAKC--CPKAIVNLISNP 165 (270)
Q Consensus 113 ~~ADvVIi~ag~~~~~g---~~r---~~~~~~N~~i~~~i~~~i~~~--~p~a~viv~sNP 165 (270)
..+|+||+++|...... .+. .+.+..|+.....+++.+.+. ...+.++++|..
T Consensus 81 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~ 141 (237)
T PRK07326 81 GGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSL 141 (237)
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECCh
Confidence 47999999987643211 111 233555665555555554432 233556666643
No 176
>PRK12827 short chain dehydrogenase; Provisional
Probab=97.90 E-value=0.00044 Score=59.97 Aligned_cols=118 Identities=17% Similarity=0.244 Sum_probs=66.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC--hhHH----HHhhccccCcceee--eeccCCHHHHh----
Q 024248 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVT----ADISHMDTNAVVRG--FLGQQQLEDAL---- 112 (270)
Q Consensus 45 ~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~--~~~~----~dl~~~~~~~~~~~--i~~t~d~~~al---- 112 (270)
+.|+|.|+||+|++|..++..|+++|. +|+++++... .... .++........... +....++++.+
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 82 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAADGA--DVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGV 82 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC--eEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 346899999999999999999999998 8999886432 1111 11211100000000 11111122222
Q ss_pred ---CCCCEEEEcCCCCCCCC---Cc---hhhhHHhhHHHHHHHHHHHh-H---hCCCCEEEEecC
Q 024248 113 ---TGMDIVIIPAGVPRKPG---MT---RDDLFNINAGIVKTLCEGIA-K---CCPKAIVNLISN 164 (270)
Q Consensus 113 ---~~ADvVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i~-~---~~p~a~viv~sN 164 (270)
...|+||+++|...... .+ ....+..|......+++.+. . ......++++|.
T Consensus 83 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS 147 (249)
T PRK12827 83 EEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIAS 147 (249)
T ss_pred HHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECC
Confidence 46899999998653111 11 12345678877777887776 1 122344555554
No 177
>PRK06398 aldose dehydrogenase; Validated
Probab=97.89 E-value=0.00037 Score=61.66 Aligned_cols=153 Identities=14% Similarity=0.107 Sum_probs=84.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhH-----HHHhhccccCcceeeeeccCCHHHHhCCCCEEEE
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV-----TADISHMDTNAVVRGFLGQQQLEDALTGMDIVII 120 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~-----~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi 120 (270)
.+++.|+||+|.+|..++..|+..|. +|+++++++.... ..|+.+... +... .....+.+...|++|+
T Consensus 6 gk~vlItGas~gIG~~ia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~D~~~~~~---i~~~--~~~~~~~~~~id~li~ 78 (258)
T PRK06398 6 DKVAIVTGGSQGIGKAVVNRLKEEGS--NVINFDIKEPSYNDVDYFKVDVSNKEQ---VIKG--IDYVISKYGRIDILVN 78 (258)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--eEEEEeCCccccCceEEEEccCCCHHH---HHHH--HHHHHHHcCCCCEEEE
Confidence 35899999999999999999999998 9999998753211 112222110 0000 0011122347899999
Q ss_pred cCCCCCCC---CCc---hhhhHHhhHHHHHHHHHHHhHh---CCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeeee
Q 024248 121 PAGVPRKP---GMT---RDDLFNINAGIVKTLCEGIAKC---CPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV 191 (270)
Q Consensus 121 ~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG~ 191 (270)
++|..... ..+ ....+..|+.....+++.+.++ ...+.|+++|.-... .+.|..-.++.
T Consensus 79 ~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~------------~~~~~~~~Y~~ 146 (258)
T PRK06398 79 NAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSF------------AVTRNAAAYVT 146 (258)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhc------------cCCCCCchhhh
Confidence 99864211 111 1233566766554444444332 234566666532220 12333344666
Q ss_pred chhhHHHHHHHHHHHhCCCCCccceEEEc
Q 024248 192 TMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (270)
Q Consensus 192 t~ldt~r~~~~lA~~l~v~~~~v~~~V~G 220 (270)
++.....+-+.++..++- . +++.++.
T Consensus 147 sKaal~~~~~~la~e~~~--~-i~vn~i~ 172 (258)
T PRK06398 147 SKHAVLGLTRSIAVDYAP--T-IRCVAVC 172 (258)
T ss_pred hHHHHHHHHHHHHHHhCC--C-CEEEEEe
Confidence 554445577777887752 2 5554443
No 178
>PRK08265 short chain dehydrogenase; Provisional
Probab=97.89 E-value=0.00036 Score=61.72 Aligned_cols=157 Identities=15% Similarity=0.128 Sum_probs=84.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhH--HHHhhccccCccee-eeeccCCHHHH-------hCCC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV--TADISHMDTNAVVR-GFLGQQQLEDA-------LTGM 115 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~--~~dl~~~~~~~~~~-~i~~t~d~~~a-------l~~A 115 (270)
.+++.|+||+|.+|..++..|+..|. +|++.|++..... ..++... . ..+. .+....+++++ +...
T Consensus 6 ~k~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~-~-~~~~~Dl~~~~~~~~~~~~~~~~~g~i 81 (261)
T PRK08265 6 GKVAIVTGGATLIGAAVARALVAAGA--RVAIVDIDADNGAAVAASLGER-A-RFIATDITDDAAIERAVATVVARFGRV 81 (261)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhCCe-e-EEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 35899999999999999999999998 9999999753211 1111100 0 0000 01111122222 3467
Q ss_pred CEEEEcCCCCCCCC--Cc---hhhhHHhhHHHHHHHHHHHhHh--CCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCe
Q 024248 116 DIVIIPAGVPRKPG--MT---RDDLFNINAGIVKTLCEGIAKC--CPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRL 188 (270)
Q Consensus 116 DvVIi~ag~~~~~g--~~---r~~~~~~N~~i~~~i~~~i~~~--~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kv 188 (270)
|++|+++|...... .+ ....+..|+.....+.+.+... .+.+.++++|.-... .+.+..-.
T Consensus 82 d~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~------------~~~~~~~~ 149 (261)
T PRK08265 82 DILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAK------------FAQTGRWL 149 (261)
T ss_pred CEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhc------------cCCCCCch
Confidence 99999998642211 11 1233455666555555544332 344666666532220 12233334
Q ss_pred eeechhhHHHHHHHHHHHhCCCCCccceEEEc
Q 024248 189 LGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (270)
Q Consensus 189 iG~t~ldt~r~~~~lA~~l~v~~~~v~~~V~G 220 (270)
++.++..-..+.+.++..+. +..+++.++-
T Consensus 150 Y~asKaa~~~~~~~la~e~~--~~gi~vn~v~ 179 (261)
T PRK08265 150 YPASKAAIRQLTRSMAMDLA--PDGIRVNSVS 179 (261)
T ss_pred hHHHHHHHHHHHHHHHHHhc--ccCEEEEEEc
Confidence 55554444456677777764 3456554443
No 179
>PRK12937 short chain dehydrogenase; Provisional
Probab=97.88 E-value=0.00039 Score=60.30 Aligned_cols=149 Identities=15% Similarity=0.093 Sum_probs=81.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCCh---hHHHHhhccccCccee--eeeccCCHHHHh-------C
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP---GVTADISHMDTNAVVR--GFLGQQQLEDAL-------T 113 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~---~~~~dl~~~~~~~~~~--~i~~t~d~~~al-------~ 113 (270)
.++|.|+|++|.+|+.++..|+++|. +|+++.++... ....++.......... .+....++++++ .
T Consensus 5 ~~~vlItG~~~~iG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (245)
T PRK12937 5 NKVAIVTGASRGIGAAIARRLAADGF--AVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG 82 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 35899999999999999999999998 88888765421 1112222111100000 011111223333 3
Q ss_pred CCCEEEEcCCCCCCCC---C---chhhhHHhhHHHHHHHHHHHhHh-CCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCC
Q 024248 114 GMDIVIIPAGVPRKPG---M---TRDDLFNINAGIVKTLCEGIAKC-CPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPK 186 (270)
Q Consensus 114 ~ADvVIi~ag~~~~~g---~---~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~ 186 (270)
..|+||+++|...... . .....+..|+.....+++.+.+. .+.+.++++|..... .+.|..
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~------------~~~~~~ 150 (245)
T PRK12937 83 RIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIA------------LPLPGY 150 (245)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeecccc------------CCCCCC
Confidence 6899999998642111 1 11233556766666666655443 244567766533221 123444
Q ss_pred CeeeechhhHHHHHHHHHHHhC
Q 024248 187 RLLGVTMLDVVRANTFVAEVLG 208 (270)
Q Consensus 187 kviG~t~ldt~r~~~~lA~~l~ 208 (270)
..++.++.....+.+.+++.++
T Consensus 151 ~~Y~~sK~a~~~~~~~~a~~~~ 172 (245)
T PRK12937 151 GPYAASKAAVEGLVHVLANELR 172 (245)
T ss_pred chhHHHHHHHHHHHHHHHHHhh
Confidence 4566655444456666777664
No 180
>PRK07806 short chain dehydrogenase; Provisional
Probab=97.88 E-value=0.00014 Score=63.39 Aligned_cols=163 Identities=18% Similarity=0.202 Sum_probs=87.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCCh-h--HHHHhhccccCcc-ee-eeeccCCHHHHh-------C
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-G--VTADISHMDTNAV-VR-GFLGQQQLEDAL-------T 113 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~-~--~~~dl~~~~~~~~-~~-~i~~t~d~~~al-------~ 113 (270)
.+++.|+||+|++|.+++..|+.+|+ +|++++++... . ...++........ +. .+....++++++ .
T Consensus 6 ~k~vlItGasggiG~~l~~~l~~~G~--~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK07806 6 GKTALVTGSSRGIGADTAKILAGAGA--HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFG 83 (248)
T ss_pred CcEEEEECCCCcHHHHHHHHHHHCCC--EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 35799999999999999999999998 99998886421 1 1122221110000 00 011111222222 3
Q ss_pred CCCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCC-CCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeeeec
Q 024248 114 GMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCP-KAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGVT 192 (270)
Q Consensus 114 ~ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG~t 192 (270)
+.|+||+++|.......+..+.+..|......+++.+.++.. .+.++++|..... . .......|....++.+
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~----~---~~~~~~~~~~~~Y~~s 156 (248)
T PRK07806 84 GLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAH----F---IPTVKTMPEYEPVARS 156 (248)
T ss_pred CCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhh----c---CccccCCccccHHHHH
Confidence 689999998754222222233456777777888888876543 4556656532110 0 0000012222234555
Q ss_pred hhhHHHHHHHHHHHhCCCCCccceEEE
Q 024248 193 MLDVVRANTFVAEVLGLDPREVDVPVV 219 (270)
Q Consensus 193 ~ldt~r~~~~lA~~l~v~~~~v~~~V~ 219 (270)
+.....+.+.++..++ +..+++.++
T Consensus 157 K~a~e~~~~~l~~~~~--~~~i~v~~v 181 (248)
T PRK07806 157 KRAGEDALRALRPELA--EKGIGFVVV 181 (248)
T ss_pred HHHHHHHHHHHHHHhh--ccCeEEEEe
Confidence 6555566666766654 345665444
No 181
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.88 E-value=0.00025 Score=66.89 Aligned_cols=75 Identities=23% Similarity=0.271 Sum_probs=49.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCCh-hHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~-~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
|||.|||+ |.||+.+|..|++++- .+|++.|+..++ ..+.+..+.......-.......+.+.+++.|+||.++.
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d-~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p 77 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGD-GEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAP 77 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCC-ceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCC
Confidence 69999998 9999999999999885 499999998542 222222211011110011122346678999999999974
No 182
>PRK07985 oxidoreductase; Provisional
Probab=97.87 E-value=0.00049 Score=62.35 Aligned_cols=146 Identities=16% Similarity=0.044 Sum_probs=81.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCCh--h-HHHHhhccccCcceeee-eccCCH----------HHHh
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--G-VTADISHMDTNAVVRGF-LGQQQL----------EDAL 112 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~--~-~~~dl~~~~~~~~~~~i-~~t~d~----------~~al 112 (270)
+++.|+||+|.+|.+++..|+.+|. +|++.+++... . ...++.... ...+..+ ...+|. .+.+
T Consensus 50 k~vlITGas~gIG~aia~~L~~~G~--~Vi~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 126 (294)
T PRK07985 50 RKALVTGGDSGIGRAAAIAYAREGA--DVAISYLPVEEEDAQDVKKIIEEC-GRKAVLLPGDLSDEKFARSLVHEAHKAL 126 (294)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCC--EEEEecCCcchhhHHHHHHHHHHc-CCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 4799999999999999999999998 99998865321 1 111221110 0011100 011121 1223
Q ss_pred CCCCEEEEcCCCCCCC----CCc---hhhhHHhhHHHHHHHHHHHhHhC-CCCEEEEecCCCCCcHHHHHHHHHHhCCCC
Q 024248 113 TGMDIVIIPAGVPRKP----GMT---RDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVGTYD 184 (270)
Q Consensus 113 ~~ADvVIi~ag~~~~~----g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~sNPv~~~~~i~t~~~~~~sg~p 184 (270)
...|++|+.+|..... ..+ ....+..|+.....+++.+.... ..+.|+++|..... .+.|
T Consensus 127 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~------------~~~~ 194 (294)
T PRK07985 127 GGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAY------------QPSP 194 (294)
T ss_pred CCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhc------------cCCC
Confidence 4679999998853211 111 23346778777666766665432 34667766643221 1223
Q ss_pred CCCeeeechhhHHHHHHHHHHHh
Q 024248 185 PKRLLGVTMLDVVRANTFVAEVL 207 (270)
Q Consensus 185 ~~kviG~t~ldt~r~~~~lA~~l 207 (270)
..-.++.++..-..+-+.+|..+
T Consensus 195 ~~~~Y~asKaal~~l~~~la~el 217 (294)
T PRK07985 195 HLLDYAATKAAILNYSRGLAKQV 217 (294)
T ss_pred CcchhHHHHHHHHHHHHHHHHHH
Confidence 22345555544445667777765
No 183
>PRK07024 short chain dehydrogenase; Provisional
Probab=97.85 E-value=0.00025 Score=62.52 Aligned_cols=145 Identities=17% Similarity=0.071 Sum_probs=79.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhH--HHHhhccccCcceee----eeccCCHHHHh-------
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV--TADISHMDTNAVVRG----FLGQQQLEDAL------- 112 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~--~~dl~~~~~~~~~~~----i~~t~d~~~al------- 112 (270)
.++|.|+|++|.+|..++..|+++|. +|+++|++..... ..++... . .+.. +....++++++
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~--~-~~~~~~~Dl~~~~~i~~~~~~~~~~~ 76 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA--TLGLVARRTDALQAFAARLPKA--A-RVSVYAADVRDADALAAAAADFIAAH 76 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHhcccC--C-eeEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 35899999999999999999999998 9999998753211 1112111 0 1111 11111222222
Q ss_pred CCCCEEEEcCCCCCCCC----Cc---hhhhHHhhHHHHHHHH----HHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhC
Q 024248 113 TGMDIVIIPAGVPRKPG----MT---RDDLFNINAGIVKTLC----EGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVG 181 (270)
Q Consensus 113 ~~ADvVIi~ag~~~~~g----~~---r~~~~~~N~~i~~~i~----~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~s 181 (270)
...|++|.++|...... .+ ....+..|+.....+. +.+.+.. .+.++++|.-... .
T Consensus 77 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~-~~~iv~isS~~~~------------~ 143 (257)
T PRK07024 77 GLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAAR-RGTLVGIASVAGV------------R 143 (257)
T ss_pred CCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcC-CCEEEEEechhhc------------C
Confidence 23699999998643211 11 1234456655554444 4554433 3556655532220 1
Q ss_pred CCCCCCeeeechhhHHHHHHHHHHHhC
Q 024248 182 TYDPKRLLGVTMLDVVRANTFVAEVLG 208 (270)
Q Consensus 182 g~p~~kviG~t~ldt~r~~~~lA~~l~ 208 (270)
+.|..-.++.++.....+...++..+.
T Consensus 144 ~~~~~~~Y~asK~a~~~~~~~l~~e~~ 170 (257)
T PRK07024 144 GLPGAGAYSASKAAAIKYLESLRVELR 170 (257)
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHhh
Confidence 234444466655555566666666553
No 184
>PRK06841 short chain dehydrogenase; Provisional
Probab=97.84 E-value=0.00036 Score=61.06 Aligned_cols=149 Identities=19% Similarity=0.225 Sum_probs=80.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh-HHHHhhccccCcceeeeeccCCHHHH-------hCCCCE
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG-VTADISHMDTNAVVRGFLGQQQLEDA-------LTGMDI 117 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~-~~~dl~~~~~~~~~~~i~~t~d~~~a-------l~~ADv 117 (270)
.++|.|+||+|.+|..++..|+++|. +|++++++.... ...++...........+....++++. +...|+
T Consensus 15 ~k~vlItGas~~IG~~la~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 15 GKVAVVTGGASGIGHAIAELFAAKGA--RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 35899999999999999999999998 899999875321 11122111000000001111112222 346799
Q ss_pred EEEcCCCCCCCC---Cc---hhhhHHhhHHHHHHHHHHHhHh---CCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCe
Q 024248 118 VIIPAGVPRKPG---MT---RDDLFNINAGIVKTLCEGIAKC---CPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRL 188 (270)
Q Consensus 118 VIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kv 188 (270)
||+++|...... .+ ....+..|+.....+.+.+.++ ...+.++++|.-... .+.+..-.
T Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~------------~~~~~~~~ 160 (255)
T PRK06841 93 LVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGV------------VALERHVA 160 (255)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhc------------cCCCCCch
Confidence 999998643111 11 1234567777666666666543 224566666532210 12333333
Q ss_pred eeechhhHHHHHHHHHHHhC
Q 024248 189 LGVTMLDVVRANTFVAEVLG 208 (270)
Q Consensus 189 iG~t~ldt~r~~~~lA~~l~ 208 (270)
++.++..-..+-+.+|+.++
T Consensus 161 Y~~sK~a~~~~~~~la~e~~ 180 (255)
T PRK06841 161 YCASKAGVVGMTKVLALEWG 180 (255)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 55544433445666677653
No 185
>PLN02688 pyrroline-5-carboxylate reductase
Probab=97.84 E-value=0.00021 Score=63.68 Aligned_cols=66 Identities=17% Similarity=0.272 Sum_probs=47.1
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCC--ccEEEEE-eCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPL--VSVLHLY-DVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~--~~eV~Lv-D~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~a 122 (270)
|||++||. |.+|+.++..|+..++ ..+|+++ |+++.. ...+.... + ...++.++++++||+||++.
T Consensus 1 ~kI~~IG~-G~mG~a~a~~L~~~g~~~~~~i~v~~~r~~~~--~~~~~~~g----~---~~~~~~~e~~~~aDvVil~v 69 (266)
T PLN02688 1 FRVGFIGA-GKMAEAIARGLVASGVVPPSRISTADDSNPAR--RDVFQSLG----V---KTAASNTEVVKSSDVIILAV 69 (266)
T ss_pred CeEEEECC-cHHHHHHHHHHHHCCCCCcceEEEEeCCCHHH--HHHHHHcC----C---EEeCChHHHHhcCCEEEEEE
Confidence 79999997 9999999999998875 3478888 775432 22222211 1 12345667789999999997
No 186
>PRK05875 short chain dehydrogenase; Provisional
Probab=97.84 E-value=0.00035 Score=62.07 Aligned_cols=159 Identities=19% Similarity=0.118 Sum_probs=86.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCCh--hHHHHhhccccCcceee----eeccCCHHHHh-------
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTNAVVRG----FLGQQQLEDAL------- 112 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~--~~~~dl~~~~~~~~~~~----i~~t~d~~~al------- 112 (270)
.++|.|+|++|++|..++..|+.+|+ +|++++++... ....++........+.. +....++++.+
T Consensus 7 ~k~vlItGasg~IG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (276)
T PRK05875 7 DRTYLVTGGGSGIGKGVAAGLVAAGA--AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWH 84 (276)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45899999999999999999999998 99999987532 11222221100011111 11111222223
Q ss_pred CCCCEEEEcCCCCCCCC----Cc---hhhhHHhhHHHHHHHHHHHhHh---CCCCEEEEecCCCCCcHHHHHHHHHHhCC
Q 024248 113 TGMDIVIIPAGVPRKPG----MT---RDDLFNINAGIVKTLCEGIAKC---CPKAIVNLISNPVNSTVPIAAEVFKKVGT 182 (270)
Q Consensus 113 ~~ADvVIi~ag~~~~~g----~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~sNPv~~~~~i~t~~~~~~sg 182 (270)
...|++|+++|.....+ .+ -.+.+..|+.....+++.+.+. ...+.++++|..... .+
T Consensus 85 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~------------~~ 152 (276)
T PRK05875 85 GRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAAS------------NT 152 (276)
T ss_pred CCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhc------------CC
Confidence 26899999998532111 11 1233455666666665554432 234566666542210 01
Q ss_pred CCCCCeeeechhhHHHHHHHHHHHhCCCCCccceEEEc
Q 024248 183 YDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (270)
Q Consensus 183 ~p~~kviG~t~ldt~r~~~~lA~~l~v~~~~v~~~V~G 220 (270)
.|..-.++.++.....+.+.+++.++. ..+++.++.
T Consensus 153 ~~~~~~Y~~sK~a~~~~~~~~~~~~~~--~~i~v~~i~ 188 (276)
T PRK05875 153 HRWFGAYGVTKSAVDHLMKLAADELGP--SWVRVNSIR 188 (276)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHhcc--cCeEEEEEe
Confidence 232334556655556677777877653 445555554
No 187
>PRK07814 short chain dehydrogenase; Provisional
Probab=97.83 E-value=0.00057 Score=60.44 Aligned_cols=147 Identities=15% Similarity=0.085 Sum_probs=83.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCcceeee-eccCCH---HHH-------h
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAVVRGF-LGQQQL---EDA-------L 112 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~~~~i-~~t~d~---~~a-------l 112 (270)
.+++.|+|++|++|.+++..|+.+|. +|++++++.... ...++.... ..+..+ ..-++. +++ +
T Consensus 10 ~~~vlItGasggIG~~~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (263)
T PRK07814 10 DQVAVVTGAGRGLGAAIALAFAEAGA--DVLIAARTESQLDEVAEQIRAAG--RRAHVVAADLAHPEATAGLAGQAVEAF 85 (263)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 45899999999999999999999998 999999975321 122222110 111111 011122 112 2
Q ss_pred CCCCEEEEcCCCCCCCC---Cc---hhhhHHhhHHHHHHHHHHHhH----hCCCCEEEEecCCCCCcHHHHHHHHHHhCC
Q 024248 113 TGMDIVIIPAGVPRKPG---MT---RDDLFNINAGIVKTLCEGIAK----CCPKAIVNLISNPVNSTVPIAAEVFKKVGT 182 (270)
Q Consensus 113 ~~ADvVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i~~----~~p~a~viv~sNPv~~~~~i~t~~~~~~sg 182 (270)
...|+||+++|...... .+ ..+.+..|+.....+.+.+.+ ....+.++++|.-... .+
T Consensus 86 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~------------~~ 153 (263)
T PRK07814 86 GRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGR------------LA 153 (263)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEcccccc------------CC
Confidence 46899999998532111 11 223456666666666665543 2445666666643221 02
Q ss_pred CCCCCeeeechhhHHHHHHHHHHHhC
Q 024248 183 YDPKRLLGVTMLDVVRANTFVAEVLG 208 (270)
Q Consensus 183 ~p~~kviG~t~ldt~r~~~~lA~~l~ 208 (270)
.+..-.++.++.....+.+.++..+.
T Consensus 154 ~~~~~~Y~~sK~a~~~~~~~~~~e~~ 179 (263)
T PRK07814 154 GRGFAAYGTAKAALAHYTRLAALDLC 179 (263)
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHC
Confidence 33344566655444567777777764
No 188
>PRK06138 short chain dehydrogenase; Provisional
Probab=97.82 E-value=0.00033 Score=61.06 Aligned_cols=146 Identities=16% Similarity=0.119 Sum_probs=77.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCcce-e-eeeccCCHHHHh-------CC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAVV-R-GFLGQQQLEDAL-------TG 114 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~~-~-~i~~t~d~~~al-------~~ 114 (270)
.++++|+||+|.+|..++..|+++|. +|++++++.... ...++. ....... . .+....++++++ .+
T Consensus 5 ~k~~lItG~sg~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~ 81 (252)
T PRK06138 5 GRVAIVTGAGSGIGRATAKLFAREGA--RVVVADRDAEAAERVAAAIA-AGGRAFARQGDVGSAEAVEALVDFVAARWGR 81 (252)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCC--eEEEecCCHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 34899999999999999999999998 999999875322 112221 1000000 0 011111222222 37
Q ss_pred CCEEEEcCCCCCCC---CCch---hhhHHhhHHHHHHHHHH----HhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCCC
Q 024248 115 MDIVIIPAGVPRKP---GMTR---DDLFNINAGIVKTLCEG----IAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYD 184 (270)
Q Consensus 115 ADvVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p 184 (270)
.|+||+++|..... ..+. ...+..|......+.+. +++. ....++++|..... .+.+
T Consensus 82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii~~sS~~~~------------~~~~ 148 (252)
T PRK06138 82 LDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQ-GGGSIVNTASQLAL------------AGGR 148 (252)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhc-CCeEEEEECChhhc------------cCCC
Confidence 89999999864211 1111 22355666555444444 4433 33455555532210 0233
Q ss_pred CCCeeeechhhHHHHHHHHHHHh
Q 024248 185 PKRLLGVTMLDVVRANTFVAEVL 207 (270)
Q Consensus 185 ~~kviG~t~ldt~r~~~~lA~~l 207 (270)
..-.++.++.....+.+.+++.+
T Consensus 149 ~~~~Y~~sK~a~~~~~~~l~~~~ 171 (252)
T PRK06138 149 GRAAYVASKGAIASLTRAMALDH 171 (252)
T ss_pred CccHHHHHHHHHHHHHHHHHHHH
Confidence 33345555444445666677766
No 189
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=97.82 E-value=0.00037 Score=60.37 Aligned_cols=146 Identities=17% Similarity=0.227 Sum_probs=79.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhH--HHHhhccccCccee--eeeccCCHHH-------HhCC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV--TADISHMDTNAVVR--GFLGQQQLED-------ALTG 114 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~--~~dl~~~~~~~~~~--~i~~t~d~~~-------al~~ 114 (270)
.+++.|+||+|++|..++..|+++|. .|++.+++..... ..++.. ..... .+....++++ .+..
T Consensus 6 ~~~vlItGa~g~iG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (245)
T PRK12936 6 GRKALVTGASGGIGEEIARLLHAQGA--IVGLHGTRVEKLEALAAELGE---RVKIFPANLSDRDEVKALGQKAEADLEG 80 (245)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHhCC---ceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 35899999999999999999999998 8888887643211 111110 00000 0111111222 2346
Q ss_pred CCEEEEcCCCCCCC---C---CchhhhHHhhHHHHHHHHHHHhHh---CCCCEEEEecCCCCCcHHHHHHHHHHhCCCCC
Q 024248 115 MDIVIIPAGVPRKP---G---MTRDDLFNINAGIVKTLCEGIAKC---CPKAIVNLISNPVNSTVPIAAEVFKKVGTYDP 185 (270)
Q Consensus 115 ADvVIi~ag~~~~~---g---~~r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~ 185 (270)
.|+||+++|..... . .+....+..|+.....+++.+.+. .+...++++|..... .+.|.
T Consensus 81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~------------~~~~~ 148 (245)
T PRK12936 81 VDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGV------------TGNPG 148 (245)
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhC------------cCCCC
Confidence 89999999864321 0 112234566766655555554322 234566666644321 02233
Q ss_pred CCeeeechhhHHHHHHHHHHHhC
Q 024248 186 KRLLGVTMLDVVRANTFVAEVLG 208 (270)
Q Consensus 186 ~kviG~t~ldt~r~~~~lA~~l~ 208 (270)
.-.++.++.....+-+.+++.+.
T Consensus 149 ~~~Y~~sk~a~~~~~~~la~~~~ 171 (245)
T PRK12936 149 QANYCASKAGMIGFSKSLAQEIA 171 (245)
T ss_pred CcchHHHHHHHHHHHHHHHHHhh
Confidence 33455555444456666666653
No 190
>PRK07576 short chain dehydrogenase; Provisional
Probab=97.82 E-value=0.00048 Score=61.13 Aligned_cols=148 Identities=15% Similarity=0.090 Sum_probs=81.2
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCccee--eeeccCCHHHH-------hCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAVVR--GFLGQQQLEDA-------LTGM 115 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~~~--~i~~t~d~~~a-------l~~A 115 (270)
.+|.|+||+|.+|..++..|+..|. +|+++|++.... ...++.......... .+....+++++ +...
T Consensus 10 k~ilItGasggIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~i 87 (264)
T PRK07576 10 KNVVVVGGTSGINLGIAQAFARAGA--NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPI 87 (264)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4799999999999999999999998 899999875321 112222111000000 01111122222 2357
Q ss_pred CEEEEcCCCCCCC---CCch---hhhHHhhHHHHHHHHHHHhHh--CCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCC
Q 024248 116 DIVIIPAGVPRKP---GMTR---DDLFNINAGIVKTLCEGIAKC--CPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKR 187 (270)
Q Consensus 116 DvVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~~~--~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~k 187 (270)
|++|.++|..... ..+. ...+..|+.....+.+.+.+. .+++.|+++|..... .+.|..-
T Consensus 88 D~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~------------~~~~~~~ 155 (264)
T PRK07576 88 DVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAF------------VPMPMQA 155 (264)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhc------------cCCCCcc
Confidence 9999998753211 1111 233556776666666655432 134677777654331 0233333
Q ss_pred eeeechhhHHHHHHHHHHHhC
Q 024248 188 LLGVTMLDVVRANTFVAEVLG 208 (270)
Q Consensus 188 viG~t~ldt~r~~~~lA~~l~ 208 (270)
.++.++.....+-+.++..+.
T Consensus 156 ~Y~asK~a~~~l~~~la~e~~ 176 (264)
T PRK07576 156 HVCAAKAGVDMLTRTLALEWG 176 (264)
T ss_pred HHHHHHHHHHHHHHHHHHHhh
Confidence 455554444556666777664
No 191
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=97.81 E-value=4.9e-05 Score=60.97 Aligned_cols=97 Identities=20% Similarity=0.237 Sum_probs=53.9
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcC
Q 024248 43 GSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (270)
Q Consensus 43 ~~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~a 122 (270)
+...+||+|||+ |.||.+++..|...|+ +|..+-.... .....+.... ... ...++++.+++||++|+++
T Consensus 7 ~~~~l~I~iIGa-GrVG~~La~aL~~ag~--~v~~v~srs~-~sa~~a~~~~--~~~----~~~~~~~~~~~aDlv~iav 76 (127)
T PF10727_consen 7 QAARLKIGIIGA-GRVGTALARALARAGH--EVVGVYSRSP-ASAERAAAFI--GAG----AILDLEEILRDADLVFIAV 76 (127)
T ss_dssp -----EEEEECT-SCCCCHHHHHHHHTTS--EEEEESSCHH--HHHHHHC----TT---------TTGGGCC-SEEEE-S
T ss_pred CCCccEEEEECC-CHHHHHHHHHHHHCCC--eEEEEEeCCc-cccccccccc--ccc----cccccccccccCCEEEEEe
Confidence 455789999998 9999999999999998 8777644321 1112222210 111 1124567789999999996
Q ss_pred CCCCCCCCchhhhHHhhHHHHHHHHHHHhHh---CCCCEEEEecCC
Q 024248 123 GVPRKPGMTRDDLFNINAGIVKTLCEGIAKC---CPKAIVNLISNP 165 (270)
Q Consensus 123 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~sNP 165 (270)
. + +.+.++++.+..+ -|+.+|+-.|..
T Consensus 77 p-----D-----------daI~~va~~La~~~~~~~g~iVvHtSGa 106 (127)
T PF10727_consen 77 P-----D-----------DAIAEVAEQLAQYGAWRPGQIVVHTSGA 106 (127)
T ss_dssp ------C-----------CHHHHHHHHHHCC--S-TT-EEEES-SS
T ss_pred c-----h-----------HHHHHHHHHHHHhccCCCCcEEEECCCC
Confidence 1 1 1246677777765 255566666643
No 192
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=97.81 E-value=0.00049 Score=59.86 Aligned_cols=148 Identities=16% Similarity=0.139 Sum_probs=78.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCcceee--eeccCCHHHHh-------CC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAVVRG--FLGQQQLEDAL-------TG 114 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~~~~--i~~t~d~~~al-------~~ 114 (270)
.++|.|+||+|++|+.++..|++.|. +|+++|++.... ...++........... +....++++++ ..
T Consensus 3 ~~~ilItGas~~iG~~la~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 80 (250)
T TIGR03206 3 DKTAIVTGGGGGIGGATCRRFAEEGA--KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP 80 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 45899999999999999999999998 999999875322 1122222111110000 11111122222 36
Q ss_pred CCEEEEcCCCCCCCC---Cch---hhhHHhhHHHHHHHHHHHhHh---CCCCEEEEecCCCCCcHHHHHHHHHHhCCCCC
Q 024248 115 MDIVIIPAGVPRKPG---MTR---DDLFNINAGIVKTLCEGIAKC---CPKAIVNLISNPVNSTVPIAAEVFKKVGTYDP 185 (270)
Q Consensus 115 ADvVIi~ag~~~~~g---~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~ 185 (270)
.|+||+++|...... .+. ...+..|+.....+.+.+.+. .+...++++|..... .+.+.
T Consensus 81 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~------------~~~~~ 148 (250)
T TIGR03206 81 VDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAAR------------VGSSG 148 (250)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhc------------cCCCC
Confidence 899999997532111 111 223567776666665555432 233455555532110 02233
Q ss_pred CCeeeechhhHHHHHHHHHHHh
Q 024248 186 KRLLGVTMLDVVRANTFVAEVL 207 (270)
Q Consensus 186 ~kviG~t~ldt~r~~~~lA~~l 207 (270)
.-.++.++..-..+.+.+++.+
T Consensus 149 ~~~Y~~sK~a~~~~~~~la~~~ 170 (250)
T TIGR03206 149 EAVYAACKGGLVAFSKTMAREH 170 (250)
T ss_pred CchHHHHHHHHHHHHHHHHHHH
Confidence 3335554433334566666665
No 193
>PRK07577 short chain dehydrogenase; Provisional
Probab=97.81 E-value=0.00029 Score=60.79 Aligned_cols=36 Identities=22% Similarity=0.128 Sum_probs=32.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT 83 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~ 83 (270)
.++|.|+|++|.+|..++..|+.+|. +|++++++..
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~~G~--~v~~~~r~~~ 38 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANLGH--QVIGIARSAI 38 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCC--EEEEEeCCcc
Confidence 35899999999999999999999998 9999998753
No 194
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=97.81 E-value=0.00044 Score=60.95 Aligned_cols=155 Identities=17% Similarity=0.163 Sum_probs=81.1
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCccee-eeeccCCHHHH-------hCCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAVVR-GFLGQQQLEDA-------LTGMD 116 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~~~-~i~~t~d~~~a-------l~~AD 116 (270)
|++.|+|++|.+|..++..|+++|. +|++.++++... ...++.+......+. .+....++++. +...|
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id 78 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGA--RVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGID 78 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence 6899999999999999999999998 999999875321 122332211000000 01111112222 34689
Q ss_pred EEEEcCCCCCC-C----CCchhh---hHHhhHH----HHHHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCCC
Q 024248 117 IVIIPAGVPRK-P----GMTRDD---LFNINAG----IVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYD 184 (270)
Q Consensus 117 vVIi~ag~~~~-~----g~~r~~---~~~~N~~----i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p 184 (270)
++|.++|.... + ..+..+ .+..|+. ..+.+++.+.+....+.|+++|..... ...|
T Consensus 79 ~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~------------~~~~ 146 (259)
T PRK08340 79 ALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVK------------EPMP 146 (259)
T ss_pred EEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccC------------CCCC
Confidence 99999986421 1 111112 1223332 234445555432345667666643221 0123
Q ss_pred CCCeeeechhhHHHHHHHHHHHhCCCCCccceE
Q 024248 185 PKRLLGVTMLDVVRANTFVAEVLGLDPREVDVP 217 (270)
Q Consensus 185 ~~kviG~t~ldt~r~~~~lA~~l~v~~~~v~~~ 217 (270)
..-.++.++-.-..+-+.+|+.++ +..|++.
T Consensus 147 ~~~~y~~sKaa~~~~~~~la~e~~--~~gI~v~ 177 (259)
T PRK08340 147 PLVLADVTRAGLVQLAKGVSRTYG--GKGIRAY 177 (259)
T ss_pred CchHHHHHHHHHHHHHHHHHHHhC--CCCEEEE
Confidence 333344444444456677888765 3445443
No 195
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=97.80 E-value=0.00024 Score=64.87 Aligned_cols=95 Identities=18% Similarity=0.180 Sum_probs=60.1
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCCCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPR 126 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag~~~ 126 (270)
|||+|||. |.+|+.++..|+..|+ +|.++|++++. ...+..... .. .....++.+.++++|+||++...
T Consensus 1 M~Ig~IGl-G~mG~~la~~L~~~g~--~V~~~dr~~~~--~~~l~~~g~-~~---~~s~~~~~~~~~~~dvIi~~vp~-- 69 (298)
T TIGR00872 1 MQLGLIGL-GRMGANIVRRLAKRGH--DCVGYDHDQDA--VKAMKEDRT-TG---VANLRELSQRLSAPRVVWVMVPH-- 69 (298)
T ss_pred CEEEEEcc-hHHHHHHHHHHHHCCC--EEEEEECCHHH--HHHHHHcCC-cc---cCCHHHHHhhcCCCCEEEEEcCc--
Confidence 69999997 9999999999999998 99999997542 222222110 00 00011333456789999998521
Q ss_pred CCCCchhhhHHhhHHHHHHHHHHHhHhC-CCCEEEEecCCC
Q 024248 127 KPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPV 166 (270)
Q Consensus 127 ~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~sNPv 166 (270)
..+.++++.+.... ++.+++..||..
T Consensus 70 --------------~~~~~v~~~l~~~l~~g~ivid~st~~ 96 (298)
T TIGR00872 70 --------------GIVDAVLEELAPTLEKGDIVIDGGNSY 96 (298)
T ss_pred --------------hHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 12344444554443 567777777654
No 196
>PRK07680 late competence protein ComER; Validated
Probab=97.80 E-value=0.00023 Score=63.99 Aligned_cols=97 Identities=16% Similarity=0.245 Sum_probs=63.3
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCc--cEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLV--SVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGV 124 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~--~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag~ 124 (270)
|||+|||+ |.+|+.++..|...+.. .+|.++|++.... ..+.+. ...+ ..+.+.++++.++|+||++..
T Consensus 1 m~I~iIG~-G~mG~ala~~L~~~g~~~~~~v~v~~r~~~~~--~~~~~~--~~g~---~~~~~~~~~~~~aDiVilav~- 71 (273)
T PRK07680 1 MNIGFIGT-GNMGTILIEAFLESGAVKPSQLTITNRTPAKA--YHIKER--YPGI---HVAKTIEEVISQSDLIFICVK- 71 (273)
T ss_pred CEEEEECc-cHHHHHHHHHHHHCCCCCcceEEEECCCHHHH--HHHHHH--cCCe---EEECCHHHHHHhCCEEEEecC-
Confidence 68999997 99999999999888742 3799999875322 222221 1111 123466677899999999861
Q ss_pred CCCCCCchhhhHHhhHHHHHHHHHHHhHhC-CCCEEEEecCCCC
Q 024248 125 PRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVN 167 (270)
Q Consensus 125 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~sNPv~ 167 (270)
+ ..+.++++.+..+. ++.+|+.+++++.
T Consensus 72 p---------------~~~~~vl~~l~~~l~~~~~iis~~ag~~ 100 (273)
T PRK07680 72 P---------------LDIYPLLQKLAPHLTDEHCLVSITSPIS 100 (273)
T ss_pred H---------------HHHHHHHHHHHhhcCCCCEEEEECCCCC
Confidence 1 11244555555433 5677777888775
No 197
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.80 E-value=0.00075 Score=58.53 Aligned_cols=115 Identities=17% Similarity=0.196 Sum_probs=65.4
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCcceee----eeccCCHHHHh-------C
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAVVRG----FLGQQQLEDAL-------T 113 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~~~~----i~~t~d~~~al-------~ 113 (270)
+++.|+|++|.+|..++..|+.+|. +|++++++.... ...++... ...+.. +....++++++ .
T Consensus 8 ~~vlVtG~sg~iG~~l~~~L~~~G~--~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (239)
T PRK07666 8 KNALITGAGRGIGRAVAIALAKEGV--NVGLLARTEENLKAVAEEVEAY--GVKVVIATADVSDYEEVTAAIEQLKNELG 83 (239)
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHh--CCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4799999999999999999999998 999999875321 11223211 111111 11111222333 3
Q ss_pred CCCEEEEcCCCCCCCC---Cch---hhhHHhhHHHHHHHHHHHhHh---CCCCEEEEecCC
Q 024248 114 GMDIVIIPAGVPRKPG---MTR---DDLFNINAGIVKTLCEGIAKC---CPKAIVNLISNP 165 (270)
Q Consensus 114 ~ADvVIi~ag~~~~~g---~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~sNP 165 (270)
+.|+||+++|...... .+. ...+..|+.....+.+.+..+ .....++++|..
T Consensus 84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~ 144 (239)
T PRK07666 84 SIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISST 144 (239)
T ss_pred CccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcch
Confidence 7999999998653211 111 234566666555555555432 223455555543
No 198
>PRK06181 short chain dehydrogenase; Provisional
Probab=97.79 E-value=0.00079 Score=59.25 Aligned_cols=115 Identities=17% Similarity=0.149 Sum_probs=66.9
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhH--HHHhhccccCcceeeee-ccCC---HHHHh-------C
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV--TADISHMDTNAVVRGFL-GQQQ---LEDAL-------T 113 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~--~~dl~~~~~~~~~~~i~-~t~d---~~~al-------~ 113 (270)
++|.|+||+|++|..++..|+.+|. +|+++|++..... ..++.... ..+..+. .-.| +++++ .
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~--~Vi~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 77 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGA--QLVLAARNETRLASLAQELADHG--GEALVVPTDVSDAEACERLIEAAVARFG 77 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4799999999999999999999998 9999998753221 12232211 1111110 1112 22222 3
Q ss_pred CCCEEEEcCCCCCCCC---C-c---hhhhHHhhHHHHHHHHHHHhHhC--CCCEEEEecCC
Q 024248 114 GMDIVIIPAGVPRKPG---M-T---RDDLFNINAGIVKTLCEGIAKCC--PKAIVNLISNP 165 (270)
Q Consensus 114 ~ADvVIi~ag~~~~~g---~-~---r~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~sNP 165 (270)
+.|+||+++|...... . + -.+.+..|+.....+++.+.++. ..+.++++|..
T Consensus 78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~ 138 (263)
T PRK06181 78 GIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSL 138 (263)
T ss_pred CCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecc
Confidence 6899999998643211 1 1 12335677777777766665432 23556656543
No 199
>PRK08263 short chain dehydrogenase; Provisional
Probab=97.78 E-value=0.00029 Score=62.74 Aligned_cols=35 Identities=11% Similarity=-0.059 Sum_probs=31.5
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT 83 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~ 83 (270)
++|.|+||+|++|.+++..|+++|. +|++++++..
T Consensus 4 k~vlItGasg~iG~~~a~~l~~~g~--~V~~~~r~~~ 38 (275)
T PRK08263 4 KVWFITGASRGFGRAWTEAALERGD--RVVATARDTA 38 (275)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCC--EEEEEECCHH
Confidence 4799999999999999999999998 9999998753
No 200
>PRK06101 short chain dehydrogenase; Provisional
Probab=97.78 E-value=0.00072 Score=59.00 Aligned_cols=145 Identities=17% Similarity=0.128 Sum_probs=82.4
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcc-ee-eeeccCCHHHHhCC----CCEEEEc
Q 024248 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAV-VR-GFLGQQQLEDALTG----MDIVIIP 121 (270)
Q Consensus 48 KI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~-~~-~i~~t~d~~~al~~----ADvVIi~ 121 (270)
++.|+||+|.+|..++..|+.+|. +|+++|+++... .++........ +. .+....+++++++. .|.+|+.
T Consensus 3 ~vlItGas~giG~~la~~L~~~G~--~V~~~~r~~~~~--~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ 78 (240)
T PRK06101 3 AVLITGATSGIGKQLALDYAKQGW--QVIACGRNQSVL--DELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFN 78 (240)
T ss_pred EEEEEcCCcHHHHHHHHHHHhCCC--EEEEEECCHHHH--HHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEc
Confidence 689999999999999999999998 999999975321 11211100000 00 11111223333332 4788888
Q ss_pred CCCCCCCC---Cc---hhhhHHhhHHHHHHHHHHHhHhC-CCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeeeechh
Q 024248 122 AGVPRKPG---MT---RDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGVTML 194 (270)
Q Consensus 122 ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG~t~l 194 (270)
+|...... .+ -.+.+..|+.....+.+.+...- ....++++|..... .+.|..-.++.++.
T Consensus 79 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~------------~~~~~~~~Y~asK~ 146 (240)
T PRK06101 79 AGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASE------------LALPRAEAYGASKA 146 (240)
T ss_pred CcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhc------------cCCCCCchhhHHHH
Confidence 76432111 11 12356788887888887776542 34556655532221 12343445666665
Q ss_pred hHHHHHHHHHHHhC
Q 024248 195 DVVRANTFVAEVLG 208 (270)
Q Consensus 195 dt~r~~~~lA~~l~ 208 (270)
....+.+.++..+.
T Consensus 147 a~~~~~~~l~~e~~ 160 (240)
T PRK06101 147 AVAYFARTLQLDLR 160 (240)
T ss_pred HHHHHHHHHHHHHH
Confidence 55667777776553
No 201
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=97.78 E-value=0.00025 Score=64.85 Aligned_cols=70 Identities=21% Similarity=0.171 Sum_probs=48.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
.+||+|||+ |.+|..++..|...|+..+|+++|+++.... .+..... .. ....++++++++||+||+++.
T Consensus 6 ~~~I~IIG~-G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~--~a~~~g~--~~---~~~~~~~~~~~~aDvViiavp 75 (307)
T PRK07502 6 FDRVALIGI-GLIGSSLARAIRRLGLAGEIVGADRSAETRA--RARELGL--GD---RVTTSAAEAVKGADLVILCVP 75 (307)
T ss_pred CcEEEEEee-CHHHHHHHHHHHhcCCCcEEEEEECCHHHHH--HHHhCCC--Cc---eecCCHHHHhcCCCEEEECCC
Confidence 358999997 9999999999998886458999999753211 1111100 00 112356678899999999974
No 202
>PRK06172 short chain dehydrogenase; Provisional
Probab=97.78 E-value=0.00067 Score=59.38 Aligned_cols=158 Identities=16% Similarity=0.146 Sum_probs=84.6
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCcce-e-eeeccCCHHHHhC-------C
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAVV-R-GFLGQQQLEDALT-------G 114 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~~-~-~i~~t~d~~~al~-------~ 114 (270)
..+|+|+||+|.+|..++..|+..|. +|++++++.... ...++......... . .+....++++.++ .
T Consensus 7 ~k~ilItGas~~iG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 84 (253)
T PRK06172 7 GKVALVTGGAAGIGRATALAFAREGA--KVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGR 84 (253)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 34899999999999999999999998 999999975321 12223221110000 0 0111112223332 4
Q ss_pred CCEEEEcCCCCCCCC----Cch---hhhHHhhHHHHHHHHH----HHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCC
Q 024248 115 MDIVIIPAGVPRKPG----MTR---DDLFNINAGIVKTLCE----GIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTY 183 (270)
Q Consensus 115 ADvVIi~ag~~~~~g----~~r---~~~~~~N~~i~~~i~~----~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~ 183 (270)
.|+||+++|.....+ .+. .+.+..|+.....+++ .+.+. ..+.++++|..... .+.
T Consensus 85 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~~sS~~~~------------~~~ 151 (253)
T PRK06172 85 LDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQ-GGGAIVNTASVAGL------------GAA 151 (253)
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEECchhhc------------cCC
Confidence 599999998642211 111 2335566655544433 33322 23556666543221 123
Q ss_pred CCCCeeeechhhHHHHHHHHHHHhCCCCCccceEEEc
Q 024248 184 DPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (270)
Q Consensus 184 p~~kviG~t~ldt~r~~~~lA~~l~v~~~~v~~~V~G 220 (270)
+..-.++.++-....+-+.+++.+. +..+++.++.
T Consensus 152 ~~~~~Y~~sKaa~~~~~~~la~e~~--~~~i~v~~i~ 186 (253)
T PRK06172 152 PKMSIYAASKHAVIGLTKSAAIEYA--KKGIRVNAVC 186 (253)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhc--ccCeEEEEEE
Confidence 3333455554444567777787774 3456554443
No 203
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=97.78 E-value=0.00076 Score=58.78 Aligned_cols=149 Identities=16% Similarity=0.153 Sum_probs=79.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcc-ee-eeeccCCHH-------HHhCCCC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAV-VR-GFLGQQQLE-------DALTGMD 116 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~-~~-~i~~t~d~~-------~al~~AD 116 (270)
.++|.|+||+|.+|.+++..|+++|. +|++++++........+........ +. .+....+++ +.....|
T Consensus 5 ~k~vlItGas~gIG~~ia~~l~~~G~--~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 82 (248)
T TIGR01832 5 GKVALVTGANTGLGQGIAVGLAEAGA--DIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID 82 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 35899999999999999999999998 9999998643221112221110000 00 011111121 1234689
Q ss_pred EEEEcCCCCCCCC---C---chhhhHHhhHHHHHHHHHHHhH----hCCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCC
Q 024248 117 IVIIPAGVPRKPG---M---TRDDLFNINAGIVKTLCEGIAK----CCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPK 186 (270)
Q Consensus 117 vVIi~ag~~~~~g---~---~r~~~~~~N~~i~~~i~~~i~~----~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~ 186 (270)
++|+++|...... . .-.+.+..|+.....+++.+.+ ....+.++++|.-... .+.+..
T Consensus 83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~------------~~~~~~ 150 (248)
T TIGR01832 83 ILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSF------------QGGIRV 150 (248)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhc------------cCCCCC
Confidence 9999998642111 1 1223456676655555555543 2224566665532110 012222
Q ss_pred CeeeechhhHHHHHHHHHHHhC
Q 024248 187 RLLGVTMLDVVRANTFVAEVLG 208 (270)
Q Consensus 187 kviG~t~ldt~r~~~~lA~~l~ 208 (270)
-.++.++..-..+.+.+++.+.
T Consensus 151 ~~Y~~sKaa~~~~~~~la~e~~ 172 (248)
T TIGR01832 151 PSYTASKHGVAGLTKLLANEWA 172 (248)
T ss_pred chhHHHHHHHHHHHHHHHHHhC
Confidence 3355544444456777888874
No 204
>PRK08219 short chain dehydrogenase; Provisional
Probab=97.78 E-value=0.00054 Score=58.63 Aligned_cols=74 Identities=19% Similarity=0.226 Sum_probs=46.4
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcce--eeeeccCCHHHHhC---CCCEEEEc
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVV--RGFLGQQQLEDALT---GMDIVIIP 121 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~--~~i~~t~d~~~al~---~ADvVIi~ 121 (270)
+++.|+||+|++|..++..|+++ + +|++++++... ..++.+......+ -.+....+++++++ +.|+||++
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~--~V~~~~r~~~~--~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 78 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-H--TLLLGGRPAER--LDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHN 78 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-C--CEEEEeCCHHH--HHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEEC
Confidence 58999999999999999999888 6 89999987432 1112111000000 00111223444444 58999999
Q ss_pred CCCC
Q 024248 122 AGVP 125 (270)
Q Consensus 122 ag~~ 125 (270)
+|..
T Consensus 79 ag~~ 82 (227)
T PRK08219 79 AGVA 82 (227)
T ss_pred CCcC
Confidence 9864
No 205
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=97.77 E-value=0.00022 Score=65.28 Aligned_cols=114 Identities=13% Similarity=0.082 Sum_probs=70.3
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHH----HH-hhcc-----ccC-cceeeeec----------cC
Q 024248 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVT----AD-ISHM-----DTN-AVVRGFLG----------QQ 106 (270)
Q Consensus 48 KI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~----~d-l~~~-----~~~-~~~~~i~~----------t~ 106 (270)
+|.|+||+|++|++++..|+.+|...+|+++.+....... .+ +... ... ..+..+.+ ..
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 5889999999999999999998853489999886542111 01 1100 000 11221111 11
Q ss_pred CHHHHhCCCCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEec
Q 024248 107 QLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163 (270)
Q Consensus 107 d~~~al~~ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~s 163 (270)
++.+..+++|+||++++.... ..+..++...|+.....+++.+.+..... ++++|
T Consensus 81 ~~~~~~~~~d~vih~a~~~~~-~~~~~~~~~~nv~g~~~ll~~a~~~~~~~-~v~iS 135 (367)
T TIGR01746 81 EWERLAENVDTIVHNGALVNW-VYPYSELRAANVLGTREVLRLAASGRAKP-LHYVS 135 (367)
T ss_pred HHHHHHhhCCEEEeCCcEecc-CCcHHHHhhhhhHHHHHHHHHHhhCCCce-EEEEc
Confidence 244556889999999875421 12334556789999999999888765443 44444
No 206
>PRK07102 short chain dehydrogenase; Provisional
Probab=97.77 E-value=0.0013 Score=57.32 Aligned_cols=115 Identities=19% Similarity=0.082 Sum_probs=66.6
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCcceee----eeccCCHHHHh----CCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAVVRG----FLGQQQLEDAL----TGMD 116 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~~~~----i~~t~d~~~al----~~AD 116 (270)
++|.|+||+|++|..++..|+++|+ +|+++|+++... ...++.... ...+.. +....++++.+ +..|
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d 78 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGA--RLYLAARDVERLERLADDLRARG-AVAVSTHELDILDTASHAAFLDSLPALPD 78 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCC--EEEEEeCCHHHHHHHHHHHHHhc-CCeEEEEecCCCChHHHHHHHHHHhhcCC
Confidence 4799999999999999999999998 999999976321 122222110 111111 11111222222 3469
Q ss_pred EEEEcCCCCCCC---CCch---hhhHHhhHHHHHHHHHHHhHh---CCCCEEEEecC
Q 024248 117 IVIIPAGVPRKP---GMTR---DDLFNINAGIVKTLCEGIAKC---CPKAIVNLISN 164 (270)
Q Consensus 117 vVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~sN 164 (270)
+||+++|..... +.+. .+.+..|+.....+.+.+..+ ...+.++++|.
T Consensus 79 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS 135 (243)
T PRK07102 79 IVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISS 135 (243)
T ss_pred EEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEec
Confidence 999998753211 1122 234567777666666666543 23456666653
No 207
>PRK06128 oxidoreductase; Provisional
Probab=97.76 E-value=0.0029 Score=57.25 Aligned_cols=148 Identities=20% Similarity=0.175 Sum_probs=83.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh----HHHHhhccccCcc-ee-eeeccCCHHH-------Hh
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG----VTADISHMDTNAV-VR-GFLGQQQLED-------AL 112 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~----~~~dl~~~~~~~~-~~-~i~~t~d~~~-------al 112 (270)
.++|.|+||+|.+|..++..|+..|. +|++.+++.... ....+........ +. .+....+.++ .+
T Consensus 55 ~k~vlITGas~gIG~~~a~~l~~~G~--~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 132 (300)
T PRK06128 55 GRKALITGADSGIGRATAIAFAREGA--DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKEL 132 (300)
T ss_pred CCEEEEecCCCcHHHHHHHHHHHcCC--EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence 35899999999999999999999998 898887653211 1112221110000 00 0111111222 23
Q ss_pred CCCCEEEEcCCCCCCCC----Cc---hhhhHHhhHHHHHHHHHHHhHhC-CCCEEEEecCCCCCcHHHHHHHHHHhCCCC
Q 024248 113 TGMDIVIIPAGVPRKPG----MT---RDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVGTYD 184 (270)
Q Consensus 113 ~~ADvVIi~ag~~~~~g----~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~sNPv~~~~~i~t~~~~~~sg~p 184 (270)
...|++|+++|...... .+ ....+..|+.....+++.+.++. ..+.|+++|..... .+.+
T Consensus 133 g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~------------~~~~ 200 (300)
T PRK06128 133 GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSY------------QPSP 200 (300)
T ss_pred CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCcccc------------CCCC
Confidence 46899999998642111 11 23456788887777888776653 34566666543221 0122
Q ss_pred CCCeeeechhhHHHHHHHHHHHh
Q 024248 185 PKRLLGVTMLDVVRANTFVAEVL 207 (270)
Q Consensus 185 ~~kviG~t~ldt~r~~~~lA~~l 207 (270)
..-.++.++.....+.+.+++.+
T Consensus 201 ~~~~Y~asK~a~~~~~~~la~el 223 (300)
T PRK06128 201 TLLDYASTKAAIVAFTKALAKQV 223 (300)
T ss_pred CchhHHHHHHHHHHHHHHHHHHh
Confidence 22225555554556777777776
No 208
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.76 E-value=0.00079 Score=58.86 Aligned_cols=147 Identities=18% Similarity=0.158 Sum_probs=78.2
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh---HHHHhhccccCcce-e-eeeccCCHHH-------HhCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG---VTADISHMDTNAVV-R-GFLGQQQLED-------ALTG 114 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~---~~~dl~~~~~~~~~-~-~i~~t~d~~~-------al~~ 114 (270)
++|.|+|++|++|+.++..|+++|. +|+++|+..... ...++......... . .+....++.+ .+..
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGF--DLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGR 80 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 4699999999999999999999998 999999764321 11122211110011 0 0111111211 1246
Q ss_pred CCEEEEcCCCCCCC-C----Cc---hhhhHHhhHHHHHHHHHHHhHh----CC-----CCEEEEecCCCCCcHHHHHHHH
Q 024248 115 MDIVIIPAGVPRKP-G----MT---RDDLFNINAGIVKTLCEGIAKC----CP-----KAIVNLISNPVNSTVPIAAEVF 177 (270)
Q Consensus 115 ADvVIi~ag~~~~~-g----~~---r~~~~~~N~~i~~~i~~~i~~~----~p-----~a~viv~sNPv~~~~~i~t~~~ 177 (270)
.|+||+++|..... + .+ ..+.+..|+.....+.+.+.+. .. ...++++|.....
T Consensus 81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~--------- 151 (256)
T PRK12745 81 IDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAI--------- 151 (256)
T ss_pred CCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhc---------
Confidence 89999999864211 1 11 1234566766665555554332 21 2345555532220
Q ss_pred HHhCCCCCCCeeeechhhHHHHHHHHHHHh
Q 024248 178 KKVGTYDPKRLLGVTMLDVVRANTFVAEVL 207 (270)
Q Consensus 178 ~~~sg~p~~kviG~t~ldt~r~~~~lA~~l 207 (270)
.+.+..-.++.++.....+.+.+++.+
T Consensus 152 ---~~~~~~~~Y~~sK~a~~~~~~~l~~~~ 178 (256)
T PRK12745 152 ---MVSPNRGEYCISKAGLSMAAQLFAARL 178 (256)
T ss_pred ---cCCCCCcccHHHHHHHHHHHHHHHHHH
Confidence 023333456665544455666777664
No 209
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=97.76 E-value=0.00056 Score=60.41 Aligned_cols=155 Identities=18% Similarity=0.137 Sum_probs=81.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceee----eeccCCHHHH-------hCC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRG----FLGQQQLEDA-------LTG 114 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~----i~~t~d~~~a-------l~~ 114 (270)
.+++.|+||+|.+|..++..|++.|. +|+++|++.... .++.... ...+.. +....+.+++ +..
T Consensus 5 ~k~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~--~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 79 (262)
T TIGR03325 5 GEVVLVTGGASGLGRAIVDRFVAEGA--RVAVLDKSAAGL--QELEAAH-GDAVVGVEGDVRSLDDHKEAVARCVAAFGK 79 (262)
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHH--HHHHhhc-CCceEEEEeccCCHHHHHHHHHHHHHHhCC
Confidence 35899999999999999999999998 999999875321 1121110 001110 1111112222 346
Q ss_pred CCEEEEcCCCCCC--C--CCc-------hhhhHHhhHHHHHHHHHHHhHhC--CCCEEEEecCCCCCcHHHHHHHHHHhC
Q 024248 115 MDIVIIPAGVPRK--P--GMT-------RDDLFNINAGIVKTLCEGIAKCC--PKAIVNLISNPVNSTVPIAAEVFKKVG 181 (270)
Q Consensus 115 ADvVIi~ag~~~~--~--g~~-------r~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~sNPv~~~~~i~t~~~~~~s 181 (270)
.|++|.++|.... + ..+ ....+..|+.....+++.+.+.- ..+.+++++.-... .
T Consensus 80 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~-----------~- 147 (262)
T TIGR03325 80 IDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGF-----------Y- 147 (262)
T ss_pred CCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEecccee-----------c-
Confidence 7999999986321 1 111 12345556555555555544321 22434444321110 0
Q ss_pred CCCCCCeeeechhhHHHHHHHHHHHhCCCCCccceEEEc
Q 024248 182 TYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (270)
Q Consensus 182 g~p~~kviG~t~ldt~r~~~~lA~~l~v~~~~v~~~V~G 220 (270)
+.+..-.++.++.....+-+.+|..++- . +++..+-
T Consensus 148 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~--~-irvn~i~ 183 (262)
T TIGR03325 148 PNGGGPLYTAAKHAVVGLVKELAFELAP--Y-VRVNGVA 183 (262)
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHhhcc--C-eEEEEEe
Confidence 1222234566555555677888888763 3 5544443
No 210
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=97.75 E-value=0.00024 Score=64.37 Aligned_cols=65 Identities=18% Similarity=0.236 Sum_probs=48.6
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~a 122 (270)
.|||+|||. |.+|..++..++..|+ +|.++|++.... ..+.... ...++++++++++||+||++.
T Consensus 2 ~~~IgviG~-G~mG~~~a~~l~~~g~--~v~~~d~~~~~~--~~~~~~g-------~~~~~~~~e~~~~~d~vi~~v 66 (296)
T PRK11559 2 TMKVGFIGL-GIMGKPMSKNLLKAGY--SLVVYDRNPEAV--AEVIAAG-------AETASTAKAVAEQCDVIITML 66 (296)
T ss_pred CceEEEEcc-CHHHHHHHHHHHHCCC--eEEEEcCCHHHH--HHHHHCC-------CeecCCHHHHHhcCCEEEEeC
Confidence 368999997 9999999999999998 999999875322 1122111 112346778889999999986
No 211
>PRK06924 short chain dehydrogenase; Provisional
Probab=97.75 E-value=0.00061 Score=59.48 Aligned_cols=33 Identities=15% Similarity=0.195 Sum_probs=30.8
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCC
Q 024248 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (270)
Q Consensus 48 KI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~ 82 (270)
+|.|+||+|.+|..++..|+++|. +|+++++++
T Consensus 3 ~vlItGasggiG~~ia~~l~~~g~--~V~~~~r~~ 35 (251)
T PRK06924 3 YVIITGTSQGLGEAIANQLLEKGT--HVISISRTE 35 (251)
T ss_pred EEEEecCCchHHHHHHHHHHhcCC--EEEEEeCCc
Confidence 699999999999999999999998 999999875
No 212
>PRK07890 short chain dehydrogenase; Provisional
Probab=97.75 E-value=0.00032 Score=61.42 Aligned_cols=117 Identities=18% Similarity=0.187 Sum_probs=66.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCcc-ee-eeeccCCHHH-------HhCC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAV-VR-GFLGQQQLED-------ALTG 114 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~-~~-~i~~t~d~~~-------al~~ 114 (270)
.++|.|+||+|+||.+++..|+.+|. +|+++|+++... ...++........ +. .+....+++. .+..
T Consensus 5 ~k~vlItGa~~~IG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (258)
T PRK07890 5 GKVVVVSGVGPGLGRTLAVRAARAGA--DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR 82 (258)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence 46899999999999999999999998 999999875321 1122221110000 00 0111111221 2346
Q ss_pred CCEEEEcCCCCCC--C--CCc---hhhhHHhhHHHHHHHHHHHhHhC--CCCEEEEecC
Q 024248 115 MDIVIIPAGVPRK--P--GMT---RDDLFNINAGIVKTLCEGIAKCC--PKAIVNLISN 164 (270)
Q Consensus 115 ADvVIi~ag~~~~--~--g~~---r~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~sN 164 (270)
.|+||+++|.... + ..+ ....+..|+.....+++.+.++. ....++++|.
T Consensus 83 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS 141 (258)
T PRK07890 83 VDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINS 141 (258)
T ss_pred ccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEec
Confidence 8999999986321 1 111 12345667766666666665432 1245666653
No 213
>PRK08264 short chain dehydrogenase; Validated
Probab=97.75 E-value=0.00067 Score=58.74 Aligned_cols=146 Identities=11% Similarity=0.004 Sum_probs=80.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHh---CCCCEEEEcC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDAL---TGMDIVIIPA 122 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al---~~ADvVIi~a 122 (270)
.++|.|+||+|.+|..++..|+.+|. .+|++++++...... ...........+....++++.+ ...|+||+++
T Consensus 6 ~~~vlItGgsg~iG~~la~~l~~~G~-~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~a 81 (238)
T PRK08264 6 GKVVLVTGANRGIGRAFVEQLLARGA-AKVYAAARDPESVTD---LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNNA 81 (238)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCc-ccEEEEecChhhhhh---cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEECC
Confidence 35799999999999999999998885 378999986532111 0000000000011112233333 3589999999
Q ss_pred CCCCCCC----Cc---hhhhHHhhHHHHHHHHHHHhHh---CCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeeeec
Q 024248 123 GVPRKPG----MT---RDDLFNINAGIVKTLCEGIAKC---CPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGVT 192 (270)
Q Consensus 123 g~~~~~g----~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG~t 192 (270)
|.....+ .+ ..+.+..|+.....+.+.+.+. ...+.++++|..... .+.+....++.+
T Consensus 82 g~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~------------~~~~~~~~y~~s 149 (238)
T PRK08264 82 GIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSW------------VNFPNLGTYSAS 149 (238)
T ss_pred CcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhc------------cCCCCchHhHHH
Confidence 8732111 11 1233456666666666665432 234566666643321 123444456666
Q ss_pred hhhHHHHHHHHHHHh
Q 024248 193 MLDVVRANTFVAEVL 207 (270)
Q Consensus 193 ~ldt~r~~~~lA~~l 207 (270)
+.....+...++..+
T Consensus 150 K~a~~~~~~~l~~~~ 164 (238)
T PRK08264 150 KAAAWSLTQALRAEL 164 (238)
T ss_pred HHHHHHHHHHHHHHh
Confidence 555556666677765
No 214
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.75 E-value=0.00031 Score=62.67 Aligned_cols=96 Identities=13% Similarity=0.142 Sum_probs=61.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCc-cEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCCC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLV-SVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGV 124 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~-~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag~ 124 (270)
.|||+|||+ |.+|..++..+...+.. .+|.++|++++.. ..+.+.. .+ ..+++.++.+.++|+||++..
T Consensus 2 mm~I~iIG~-G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~--~~~~~~~---g~---~~~~~~~~~~~~advVil~v~- 71 (267)
T PRK11880 2 MKKIGFIGG-GNMASAIIGGLLASGVPAKDIIVSDPSPEKR--AALAEEY---GV---RAATDNQEAAQEADVVVLAVK- 71 (267)
T ss_pred CCEEEEEec-hHHHHHHHHHHHhCCCCcceEEEEcCCHHHH--HHHHHhc---CC---eecCChHHHHhcCCEEEEEcC-
Confidence 469999998 99999999999887721 2899999875322 1222210 01 123456677889999999862
Q ss_pred CCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCC
Q 024248 125 PRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVN 167 (270)
Q Consensus 125 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~ 167 (270)
...+.++++.+..+. +..|+.++|.+.
T Consensus 72 ---------------~~~~~~v~~~l~~~~-~~~vvs~~~gi~ 98 (267)
T PRK11880 72 ---------------PQVMEEVLSELKGQL-DKLVVSIAAGVT 98 (267)
T ss_pred ---------------HHHHHHHHHHHHhhc-CCEEEEecCCCC
Confidence 122345555555443 456666667554
No 215
>PRK12939 short chain dehydrogenase; Provisional
Probab=97.73 E-value=0.00054 Score=59.53 Aligned_cols=149 Identities=15% Similarity=0.155 Sum_probs=79.6
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCccee--eeeccCCHHHH-------hCC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAVVR--GFLGQQQLEDA-------LTG 114 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~~~--~i~~t~d~~~a-------l~~ 114 (270)
.++|.|+|++|.+|..++..|+++|+ +|+++++++... ...++.......... .+....++++. +.+
T Consensus 7 ~~~vlItGa~g~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (250)
T PRK12939 7 GKRALVTGAARGLGAAFAEALAEAGA--TVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGG 84 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 46899999999999999999999998 999998875321 122332211000000 01111112222 257
Q ss_pred CCEEEEcCCCCCCCC---Cch---hhhHHhhHHHHHHHHHHHhHh---CCCCEEEEecCCCCCcHHHHHHHHHHhCCCCC
Q 024248 115 MDIVIIPAGVPRKPG---MTR---DDLFNINAGIVKTLCEGIAKC---CPKAIVNLISNPVNSTVPIAAEVFKKVGTYDP 185 (270)
Q Consensus 115 ADvVIi~ag~~~~~g---~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~ 185 (270)
.|+||+++|...... .+. ...+..|+.....+++.+.++ ...+.++++|..... .+.+.
T Consensus 85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~------------~~~~~ 152 (250)
T PRK12939 85 LDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTAL------------WGAPK 152 (250)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhc------------cCCCC
Confidence 899999998643211 111 223456666666666555433 224566666542210 01222
Q ss_pred CCeeeechhhHHHHHHHHHHHhC
Q 024248 186 KRLLGVTMLDVVRANTFVAEVLG 208 (270)
Q Consensus 186 ~kviG~t~ldt~r~~~~lA~~l~ 208 (270)
.-.++.++....++.+.+++.++
T Consensus 153 ~~~y~~sK~~~~~~~~~l~~~~~ 175 (250)
T PRK12939 153 LGAYVASKGAVIGMTRSLARELG 175 (250)
T ss_pred cchHHHHHHHHHHHHHHHHHHHh
Confidence 22344444444456666666654
No 216
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=97.73 E-value=0.00056 Score=59.95 Aligned_cols=118 Identities=14% Similarity=0.105 Sum_probs=65.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCcc-ee-eeeccCCHHHHh-------CC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAV-VR-GFLGQQQLEDAL-------TG 114 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~-~~-~i~~t~d~~~al-------~~ 114 (270)
.++|.|+||+|.+|..++..|+.+|. +|++++++.... ...++........ +. .+....++++++ ..
T Consensus 11 ~k~ilItGas~~IG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 88 (256)
T PRK06124 11 GQVALVTGSARGLGFEIARALAGAGA--HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGR 88 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 45899999999999999999999998 999999975321 1222321110000 00 011111222222 34
Q ss_pred CCEEEEcCCCCCCC---CCc---hhhhHHhhHHHHHHHHHHHhHh---CCCCEEEEecCC
Q 024248 115 MDIVIIPAGVPRKP---GMT---RDDLFNINAGIVKTLCEGIAKC---CPKAIVNLISNP 165 (270)
Q Consensus 115 ADvVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~sNP 165 (270)
.|+||.++|..... ..+ -...+..|+.....+++.+.+. ...+.++++|..
T Consensus 89 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~ 148 (256)
T PRK06124 89 LDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSI 148 (256)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeec
Confidence 69999999864211 111 1234566766555555444332 234566666654
No 217
>PRK12828 short chain dehydrogenase; Provisional
Probab=97.73 E-value=0.00031 Score=60.46 Aligned_cols=117 Identities=15% Similarity=0.126 Sum_probs=65.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCcceeeeeccCCHHHH-------hCCCC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAVVRGFLGQQQLEDA-------LTGMD 116 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~~~~i~~t~d~~~a-------l~~AD 116 (270)
.++|+|+|++|.+|..++..|+++|. +|++++++.... ...++...........+....+++++ +...|
T Consensus 7 ~k~vlItGatg~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (239)
T PRK12828 7 GKVVAITGGFGGLGRATAAWLAARGA--RVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLD 84 (239)
T ss_pred CCEEEEECCCCcHhHHHHHHHHHCCC--eEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcC
Confidence 45899999999999999999999998 899999975321 11222211100000001111122222 33689
Q ss_pred EEEEcCCCCCCCC---Cc---hhhhHHhhHHHHHHHHHHHhHh---CCCCEEEEecC
Q 024248 117 IVIIPAGVPRKPG---MT---RDDLFNINAGIVKTLCEGIAKC---CPKAIVNLISN 164 (270)
Q Consensus 117 vVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~sN 164 (270)
+||+++|...... .+ -.+.+..|......+++.+.+. .+...++++|.
T Consensus 85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS 141 (239)
T PRK12828 85 ALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGA 141 (239)
T ss_pred EEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECc
Confidence 9999987542111 11 1223456666555555555432 34456666553
No 218
>PRK12746 short chain dehydrogenase; Provisional
Probab=97.73 E-value=0.0019 Score=56.40 Aligned_cols=149 Identities=17% Similarity=0.195 Sum_probs=79.6
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEE-eCCCChh--HHHHhhccccCcc-ee-eeeccCCHHHHh--------
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLY-DVVNTPG--VTADISHMDTNAV-VR-GFLGQQQLEDAL-------- 112 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~Lv-D~~~~~~--~~~dl~~~~~~~~-~~-~i~~t~d~~~al-------- 112 (270)
.++|.|+|++|++|+.++..|+++|. +|+++ +++.... ...++........ +. .+....++++++
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~G~--~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~ 83 (254)
T PRK12746 6 GKVALVTGASRGIGRAIAMRLANDGA--LVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQ 83 (254)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhc
Confidence 35899999999999999999999998 88775 4433211 1112221100000 00 011111222222
Q ss_pred -----CCCCEEEEcCCCCCCCC---Cch---hhhHHhhHHHHHHHHHHHhHhC-CCCEEEEecCCCCCcHHHHHHHHHHh
Q 024248 113 -----TGMDIVIIPAGVPRKPG---MTR---DDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKV 180 (270)
Q Consensus 113 -----~~ADvVIi~ag~~~~~g---~~r---~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~sNPv~~~~~i~t~~~~~~ 180 (270)
.+.|+||+++|...... .+. ...+..|+.....+++.+.++. ..+.++++|.....
T Consensus 84 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~------------ 151 (254)
T PRK12746 84 IRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVR------------ 151 (254)
T ss_pred cccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhc------------
Confidence 25899999998643211 111 2345577777777777776543 23456655532210
Q ss_pred CCCCCCCeeeechhhHHHHHHHHHHHhC
Q 024248 181 GTYDPKRLLGVTMLDVVRANTFVAEVLG 208 (270)
Q Consensus 181 sg~p~~kviG~t~ldt~r~~~~lA~~l~ 208 (270)
.+.+..-.++.++.....+.+.+++.++
T Consensus 152 ~~~~~~~~Y~~sK~a~~~~~~~~~~~~~ 179 (254)
T PRK12746 152 LGFTGSIAYGLSKGALNTMTLPLAKHLG 179 (254)
T ss_pred CCCCCCcchHhhHHHHHHHHHHHHHHHh
Confidence 0223333456655555556666777654
No 219
>PRK06500 short chain dehydrogenase; Provisional
Probab=97.72 E-value=0.00079 Score=58.53 Aligned_cols=145 Identities=14% Similarity=0.063 Sum_probs=80.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeee-eccCCH----------HHHhCC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGF-LGQQQL----------EDALTG 114 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i-~~t~d~----------~~al~~ 114 (270)
.++|.|+||+|.+|..++..|+.+|. +|+++++++.... ++.+.. ...+..+ ....|. ++.+..
T Consensus 6 ~k~vlItGasg~iG~~la~~l~~~g~--~v~~~~r~~~~~~--~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (249)
T PRK06500 6 GKTALITGGTSGIGLETARQFLAEGA--RVAITGRDPASLE--AARAEL-GESALVIRADAGDVAAQKALAQALAEAFGR 80 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEecCCHHHHH--HHHHHh-CCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 35899999999999999999999998 9999998743111 111100 0000000 001121 122346
Q ss_pred CCEEEEcCCCCCCCC---Cc---hhhhHHhhHHHHHHHHHHHhHhC-CCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCC
Q 024248 115 MDIVIIPAGVPRKPG---MT---RDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKR 187 (270)
Q Consensus 115 ADvVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~k 187 (270)
.|+||+++|...... .+ ....+..|+.....+.+.+.++- ....+++++..... .+.|..-
T Consensus 81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~------------~~~~~~~ 148 (249)
T PRK06500 81 LDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAH------------IGMPNSS 148 (249)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhc------------cCCCCcc
Confidence 899999998643111 11 22356778887777887776532 22344444432210 1233334
Q ss_pred eeeechhhHHHHHHHHHHHh
Q 024248 188 LLGVTMLDVVRANTFVAEVL 207 (270)
Q Consensus 188 viG~t~ldt~r~~~~lA~~l 207 (270)
.++.++.....+.+.+++.+
T Consensus 149 ~Y~~sK~a~~~~~~~la~e~ 168 (249)
T PRK06500 149 VYAASKAALLSLAKTLSGEL 168 (249)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 45555544445666666665
No 220
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=97.72 E-value=0.00023 Score=64.47 Aligned_cols=64 Identities=14% Similarity=0.268 Sum_probs=47.7
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 48 KI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
||+|||. |.+|+.++..|+..|+ +|+++|++... ...+..... ...++.++++++||+||++..
T Consensus 1 ~IgvIG~-G~mG~~iA~~l~~~G~--~V~~~dr~~~~--~~~~~~~g~-------~~~~~~~~~~~~aDivi~~vp 64 (291)
T TIGR01505 1 KVGFIGL-GIMGSPMSINLAKAGY--QLHVTTIGPEV--ADELLAAGA-------VTAETARQVTEQADVIFTMVP 64 (291)
T ss_pred CEEEEEe-cHHHHHHHHHHHHCCC--eEEEEcCCHHH--HHHHHHCCC-------cccCCHHHHHhcCCEEEEecC
Confidence 5999997 9999999999999998 99999987532 222222211 113466788999999999863
No 221
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=97.71 E-value=0.0021 Score=56.08 Aligned_cols=160 Identities=16% Similarity=0.159 Sum_probs=85.6
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCCh--hHHHHhhcccc-Ccceeeeecc----C-------CHHH
Q 024248 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDT-NAVVRGFLGQ----Q-------QLED 110 (270)
Q Consensus 45 ~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~--~~~~dl~~~~~-~~~~~~i~~t----~-------d~~~ 110 (270)
+.++|.|+|++|++|..++..|++.|. +|+++|++... ....++.+... ...+.....+ . .+.+
T Consensus 11 ~~k~vlItG~~g~iG~~la~~l~~~G~--~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 88 (247)
T PRK08945 11 KDRIILVTGAGDGIGREAALTYARHGA--TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE 88 (247)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC--cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence 446899999999999999999999998 99999997532 12223332211 0111000000 0 1223
Q ss_pred HhCCCCEEEEcCCCCCCC----CCc---hhhhHHhhHHHHHHHHHHHhHh---CCCCEEEEecCCCCCcHHHHHHHHHHh
Q 024248 111 ALTGMDIVIIPAGVPRKP----GMT---RDDLFNINAGIVKTLCEGIAKC---CPKAIVNLISNPVNSTVPIAAEVFKKV 180 (270)
Q Consensus 111 al~~ADvVIi~ag~~~~~----g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~sNPv~~~~~i~t~~~~~~ 180 (270)
.+...|+||+++|..... ..+ ....+..|+.....+.+.+..+ .+...|+++|.....
T Consensus 89 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~------------ 156 (247)
T PRK08945 89 QFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGR------------ 156 (247)
T ss_pred HhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhc------------
Confidence 345689999998753211 111 2234567776655555554322 344566666543221
Q ss_pred CCCCCCCeeeechhhHHHHHHHHHHHhCCCCCccceEEEc
Q 024248 181 GTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (270)
Q Consensus 181 sg~p~~kviG~t~ldt~r~~~~lA~~l~v~~~~v~~~V~G 220 (270)
.+.+....++.++.....+...+++.+.- ..+.+.++.
T Consensus 157 ~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~--~~i~~~~v~ 194 (247)
T PRK08945 157 QGRANWGAYAVSKFATEGMMQVLADEYQG--TNLRVNCIN 194 (247)
T ss_pred CCCCCCcccHHHHHHHHHHHHHHHHHhcc--cCEEEEEEe
Confidence 12233334555544444455666666543 345544444
No 222
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=97.71 E-value=0.00038 Score=63.22 Aligned_cols=66 Identities=18% Similarity=0.240 Sum_probs=50.3
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
+||++||. |.+|+.+|..|...|+ +|+.+|+++++. ...+..... ....++.+++++||+||.+..
T Consensus 1 ~kIafIGL-G~MG~pmA~~L~~aG~--~v~v~~r~~~ka-~~~~~~~Ga-------~~a~s~~eaa~~aDvVitmv~ 66 (286)
T COG2084 1 MKIAFIGL-GIMGSPMAANLLKAGH--EVTVYNRTPEKA-AELLAAAGA-------TVAASPAEAAAEADVVITMLP 66 (286)
T ss_pred CeEEEEcC-chhhHHHHHHHHHCCC--EEEEEeCChhhh-hHHHHHcCC-------cccCCHHHHHHhCCEEEEecC
Confidence 58999997 9999999999999999 999999986543 222222111 123356789999999999864
No 223
>PRK07578 short chain dehydrogenase; Provisional
Probab=97.71 E-value=0.00067 Score=57.36 Aligned_cols=144 Identities=18% Similarity=0.117 Sum_probs=78.4
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCCCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPR 126 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag~~~ 126 (270)
|++.|+|++|.+|..++..|+++ . +|++++++.. ....|+.+.+. +. ..-+.+...|++|.++|...
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~--~vi~~~r~~~-~~~~D~~~~~~---~~------~~~~~~~~id~lv~~ag~~~ 67 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-H--EVITAGRSSG-DVQVDITDPAS---IR------ALFEKVGKVDAVVSAAGKVH 67 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-C--cEEEEecCCC-ceEecCCChHH---HH------HHHHhcCCCCEEEECCCCCC
Confidence 68999999999999999999887 5 8999988643 11223333210 00 01122347899999998642
Q ss_pred CC---CCch---hhhHHhhHHHHHHHHHHHhHhC-CCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeeeechhhHHHH
Q 024248 127 KP---GMTR---DDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGVTMLDVVRA 199 (270)
Q Consensus 127 ~~---g~~r---~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG~t~ldt~r~ 199 (270)
.. +.+. ...+..|+.....+.+.+.++- +.+.++++|.-... .+.|..-.++.++-....+
T Consensus 68 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~------------~~~~~~~~Y~~sK~a~~~~ 135 (199)
T PRK07578 68 FAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSD------------EPIPGGASAATVNGALEGF 135 (199)
T ss_pred CCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccC------------CCCCCchHHHHHHHHHHHH
Confidence 11 1111 2234556655555665554432 34556555532210 0222222344443333456
Q ss_pred HHHHHHHhCCCCCccceEE
Q 024248 200 NTFVAEVLGLDPREVDVPV 218 (270)
Q Consensus 200 ~~~lA~~l~v~~~~v~~~V 218 (270)
-+.++.++ +..+++..
T Consensus 136 ~~~la~e~---~~gi~v~~ 151 (199)
T PRK07578 136 VKAAALEL---PRGIRINV 151 (199)
T ss_pred HHHHHHHc---cCCeEEEE
Confidence 66777776 33454433
No 224
>PRK06545 prephenate dehydrogenase; Validated
Probab=97.71 E-value=0.00037 Score=65.28 Aligned_cols=68 Identities=19% Similarity=0.237 Sum_probs=47.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~a 122 (270)
+||+|||. |.+|.+++..|...|+ ++.++|.+........-... .... ..++++++++++||+||+++
T Consensus 1 ~~I~iIG~-GliG~siA~~L~~~G~--~v~i~~~~~~~~~~~~a~~~---~~~~--~~~~~~~~~~~~aDlVilav 68 (359)
T PRK06545 1 RTVLIVGL-GLIGGSLALAIKAAGP--DVFIIGYDPSAAQLARALGF---GVID--ELAADLQRAAAEADLIVLAV 68 (359)
T ss_pred CeEEEEEe-CHHHHHHHHHHHhcCC--CeEEEEeCCCHHHHHHHhcC---CCCc--ccccCHHHHhcCCCEEEEeC
Confidence 37999997 9999999999999998 88889987643221110000 0000 12346778899999999996
No 225
>PRK08269 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.70 E-value=0.0002 Score=65.97 Aligned_cols=111 Identities=17% Similarity=0.217 Sum_probs=68.4
Q ss_pred hHHHHHHHHHhCCCccEEEEEeCCCCh----------hH--HHH----hhccc------cCcceeeeeccC--CHHHHhC
Q 024248 58 IGQPLAMLMKINPLVSVLHLYDVVNTP----------GV--TAD----ISHMD------TNAVVRGFLGQQ--QLEDALT 113 (270)
Q Consensus 58 VGs~la~~l~~~g~~~eV~LvD~~~~~----------~~--~~d----l~~~~------~~~~~~~i~~t~--d~~~al~ 113 (270)
+|+.+|..++..|+ +|+++|++++. +. ... +.... ....+..+..++ +++++++
T Consensus 1 MG~giA~~~a~~G~--~V~l~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~a~~ 78 (314)
T PRK08269 1 MGQGIALAFAFAGH--DVTLIDFKPRDAAGWRALDAEARAEIERTLAALVALGRIDAAQADAVLARIAVVARDGAADALA 78 (314)
T ss_pred CcHHHHHHHHhCCC--eEEEEeCCcccchhhHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeEeecCcchHHHhc
Confidence 57889999999999 99999998731 10 101 11000 001112233333 3668899
Q ss_pred CCCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhC-CCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeeee
Q 024248 114 GMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV 191 (270)
Q Consensus 114 ~ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG~ 191 (270)
+||+||.++ .++.++.+++...+.+.+ |++++ .||.+... ++++.... . .++|++|+
T Consensus 79 ~aD~ViEav--------------~E~~~~K~~~f~~l~~~~~~~~il--aSntS~~~---~~~la~~~-~-~p~r~~g~ 136 (314)
T PRK08269 79 DADLVFEAV--------------PEVLDAKREALRWLGRHVDADAII--ASTTSTFL---VTDLQRHV-A-HPERFLNA 136 (314)
T ss_pred cCCEEEECC--------------cCCHHHHHHHHHHHHhhCCCCcEE--EEccccCC---HHHHHhhc-C-CcccEEEE
Confidence 999999985 345677888888898887 45655 88877753 34443322 2 24556554
No 226
>PRK05866 short chain dehydrogenase; Provisional
Probab=97.70 E-value=0.0021 Score=58.25 Aligned_cols=36 Identities=19% Similarity=0.243 Sum_probs=32.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT 83 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~ 83 (270)
.++|.|+||+|.+|..++..|+.+|. +|++++++..
T Consensus 40 ~k~vlItGasggIG~~la~~La~~G~--~Vi~~~R~~~ 75 (293)
T PRK05866 40 GKRILLTGASSGIGEAAAEQFARRGA--TVVAVARRED 75 (293)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHH
Confidence 35799999999999999999999998 9999999753
No 227
>PLN02256 arogenate dehydrogenase
Probab=97.69 E-value=0.00042 Score=63.57 Aligned_cols=68 Identities=19% Similarity=0.194 Sum_probs=48.5
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHh-CCCCEEEE
Q 024248 42 GGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDAL-TGMDIVII 120 (270)
Q Consensus 42 ~~~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al-~~ADvVIi 120 (270)
++.+.|||+|||. |.+|..++..|...|. +|+.+|++.....+.++ . + ...++.++.+ .++|+||+
T Consensus 32 ~~~~~~kI~IIG~-G~mG~slA~~L~~~G~--~V~~~d~~~~~~~a~~~--g-----v---~~~~~~~e~~~~~aDvVil 98 (304)
T PLN02256 32 EKSRKLKIGIVGF-GNFGQFLAKTFVKQGH--TVLATSRSDYSDIAAEL--G-----V---SFFRDPDDFCEEHPDVVLL 98 (304)
T ss_pred ccCCCCEEEEEee-CHHHHHHHHHHHhCCC--EEEEEECccHHHHHHHc--C-----C---eeeCCHHHHhhCCCCEEEE
Confidence 4567789999997 9999999999998887 99999987532111111 1 1 1124565655 47999999
Q ss_pred cC
Q 024248 121 PA 122 (270)
Q Consensus 121 ~a 122 (270)
++
T Consensus 99 av 100 (304)
T PLN02256 99 CT 100 (304)
T ss_pred ec
Confidence 86
No 228
>PRK06197 short chain dehydrogenase; Provisional
Probab=97.69 E-value=0.00061 Score=61.79 Aligned_cols=159 Identities=19% Similarity=0.136 Sum_probs=84.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhH--HHHhhccccCcceee----eeccCCHHHH-------h
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV--TADISHMDTNAVVRG----FLGQQQLEDA-------L 112 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~--~~dl~~~~~~~~~~~----i~~t~d~~~a-------l 112 (270)
.++|.|+||+|++|..++..|+++|. +|++++++..... ..++........+.. +....+++++ +
T Consensus 16 ~k~vlItGas~gIG~~~a~~l~~~G~--~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 93 (306)
T PRK06197 16 GRVAVVTGANTGLGYETAAALAAKGA--HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAY 93 (306)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence 35799999999999999999999998 9999998753221 122321100011111 1111112222 2
Q ss_pred CCCCEEEEcCCCCCCCC----CchhhhHHhhHHH----HHHHHHHHhHhCCCCEEEEecCCCCCc-HHH-HHHHHHHhCC
Q 024248 113 TGMDIVIIPAGVPRKPG----MTRDDLFNINAGI----VKTLCEGIAKCCPKAIVNLISNPVNST-VPI-AAEVFKKVGT 182 (270)
Q Consensus 113 ~~ADvVIi~ag~~~~~g----~~r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~sNPv~~~-~~i-~t~~~~~~sg 182 (270)
...|+||++||...... ......+..|+.. ++.+.+.+++. ..+.|+++|...... ... ... ......
T Consensus 94 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-~~~~iV~vSS~~~~~~~~~~~~~-~~~~~~ 171 (306)
T PRK06197 94 PRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPV-PGSRVVTVSSGGHRIRAAIHFDD-LQWERR 171 (306)
T ss_pred CCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhC-CCCEEEEECCHHHhccCCCCccc-cCcccC
Confidence 35899999998642211 1112335666655 56666666543 345666665321100 000 000 000001
Q ss_pred CCCCCeeeechhhHHHHHHHHHHHhC
Q 024248 183 YDPKRLLGVTMLDVVRANTFVAEVLG 208 (270)
Q Consensus 183 ~p~~kviG~t~ldt~r~~~~lA~~l~ 208 (270)
+++...++.+++....+.+.+++++.
T Consensus 172 ~~~~~~Y~~SK~a~~~~~~~la~~l~ 197 (306)
T PRK06197 172 YNRVAAYGQSKLANLLFTYELQRRLA 197 (306)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHhh
Confidence 22233466677766777888888874
No 229
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=97.69 E-value=0.00083 Score=57.93 Aligned_cols=116 Identities=20% Similarity=0.278 Sum_probs=64.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhH--HHHhhccccCccee--eeeccCCHHHH-------hCC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV--TADISHMDTNAVVR--GFLGQQQLEDA-------LTG 114 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~--~~dl~~~~~~~~~~--~i~~t~d~~~a-------l~~ 114 (270)
.++|+|+|++|++|..++..|+++|+ +|+++++++.... ..++.......... .+....++.++ +..
T Consensus 5 ~~~ilItGasg~iG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (246)
T PRK05653 5 GKTALVTGASRGIGRAIALRLAADGA--KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGA 82 (246)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 35899999999999999999999999 8999999754211 12222110000000 01111112222 345
Q ss_pred CCEEEEcCCCCCCC---CCc---hhhhHHhhHHHHHHHHHHHhHh---CCCCEEEEec
Q 024248 115 MDIVIIPAGVPRKP---GMT---RDDLFNINAGIVKTLCEGIAKC---CPKAIVNLIS 163 (270)
Q Consensus 115 ADvVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~s 163 (270)
.|+||+++|..... ..+ -.+.+..|+.....+++.+.++ .....++++|
T Consensus 83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~s 140 (246)
T PRK05653 83 LDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNIS 140 (246)
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEC
Confidence 69999998753221 111 1233556666666666665432 2224565555
No 230
>PRK07634 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.69 E-value=0.00059 Score=59.97 Aligned_cols=70 Identities=10% Similarity=0.170 Sum_probs=46.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCC--ccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcC
Q 024248 45 PGFKVAVLGAAGGIGQPLAMLMKINPL--VSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (270)
Q Consensus 45 ~~mKI~IIGa~G~VGs~la~~l~~~g~--~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~a 122 (270)
+.|||+|||+ |.+|..++..++..+. ..+++++++... ....++.+.. .+ ..++++++.++++|+||++.
T Consensus 3 ~~~kI~iIG~-G~mg~ala~~l~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~---~~---~~~~~~~~~~~~~DiViiav 74 (245)
T PRK07634 3 KKHRILFIGA-GRMAEAIFSGLLKTSKEYIEEIIVSNRSNV-EKLDQLQARY---NV---STTTDWKQHVTSVDTIVLAM 74 (245)
T ss_pred CCCeEEEECc-CHHHHHHHHHHHhCCCCCcCeEEEECCCCH-HHHHHHHHHc---Cc---EEeCChHHHHhcCCEEEEec
Confidence 3579999997 9999999998887753 334777776421 1122232210 11 12356778889999999986
No 231
>PRK06701 short chain dehydrogenase; Provisional
Probab=97.69 E-value=0.0014 Score=59.18 Aligned_cols=115 Identities=14% Similarity=0.122 Sum_probs=69.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCCh---hHHHHhhccccCcceee----eeccCCHHHHh------
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP---GVTADISHMDTNAVVRG----FLGQQQLEDAL------ 112 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~---~~~~dl~~~~~~~~~~~----i~~t~d~~~al------ 112 (270)
.++|.|+||+|.+|..++..|++.|. +|++++++... .....+... ...+.. +....++++.+
T Consensus 46 ~k~iLItGasggIG~~la~~l~~~G~--~V~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~i~~~ 121 (290)
T PRK06701 46 GKVALITGGDSGIGRAVAVLFAKEGA--DIAIVYLDEHEDANETKQRVEKE--GVKCLLIPGDVSDEAFCKDAVEETVRE 121 (290)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 35799999999999999999999998 99999987531 111122111 011110 11111122222
Q ss_pred -CCCCEEEEcCCCCCCCC----Cc---hhhhHHhhHHHHHHHHHHHhHh-CCCCEEEEecC
Q 024248 113 -TGMDIVIIPAGVPRKPG----MT---RDDLFNINAGIVKTLCEGIAKC-CPKAIVNLISN 164 (270)
Q Consensus 113 -~~ADvVIi~ag~~~~~g----~~---r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~sN 164 (270)
...|+||+++|...... .+ -...+..|+.....+++.+.+. .+.+.+|++|.
T Consensus 122 ~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS 182 (290)
T PRK06701 122 LGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGS 182 (290)
T ss_pred cCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEec
Confidence 35799999998632111 11 1345677888788888777654 24456666664
No 232
>PRK07825 short chain dehydrogenase; Provisional
Probab=97.69 E-value=0.0016 Score=57.79 Aligned_cols=114 Identities=18% Similarity=0.142 Sum_probs=64.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhH--HHHhhcccc-CcceeeeeccCC-------HHHHhCCC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV--TADISHMDT-NAVVRGFLGQQQ-------LEDALTGM 115 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~--~~dl~~~~~-~~~~~~i~~t~d-------~~~al~~A 115 (270)
.++|.|+||+|.+|..++..|+.+|. .|++.++++.... ..++..... ... +....+ ..+...+.
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~D---~~~~~~~~~~~~~~~~~~~~i 79 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGA--RVAIGDLDEALAKETAAELGLVVGGPLD---VTDPASFAAFLDAVEADLGPI 79 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhccceEEEcc---CCCHHHHHHHHHHHHHHcCCC
Confidence 45899999999999999999999998 8999998753211 112211100 000 111111 12223578
Q ss_pred CEEEEcCCCCCCCC---Cc---hhhhHHhhHHHHHH----HHHHHhHhCCCCEEEEecCC
Q 024248 116 DIVIIPAGVPRKPG---MT---RDDLFNINAGIVKT----LCEGIAKCCPKAIVNLISNP 165 (270)
Q Consensus 116 DvVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~----i~~~i~~~~p~a~viv~sNP 165 (270)
|++|+++|...... .+ -...+..|+..... +.+.+.+. ..+.|+++|..
T Consensus 80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~g~iv~isS~ 138 (273)
T PRK07825 80 DVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPR-GRGHVVNVASL 138 (273)
T ss_pred CEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCEEEEEcCc
Confidence 99999998643211 11 12345566654444 44444432 34566666643
No 233
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=97.69 E-value=0.00071 Score=58.55 Aligned_cols=155 Identities=15% Similarity=0.120 Sum_probs=78.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCccee--eeeccCC---HHHHhCCCCEEEEc
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVR--GFLGQQQ---LEDALTGMDIVIIP 121 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~--~i~~t~d---~~~al~~ADvVIi~ 121 (270)
|+|+|+||+|.||..++..|++++....|++.+++.... .... ..... .+....+ +.+.+...|+||.+
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~----~~~~--~~~~~~~Dls~~~~~~~~~~~~~~id~li~~ 74 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD----FQHD--NVQWHALDVTDEAEIKQLSEQFTQLDWLINC 74 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc----cccC--ceEEEEecCCCHHHHHHHHHhcCCCCEEEEC
Confidence 689999999999999999999885423677766654211 0000 00000 0000001 22345689999999
Q ss_pred CCCCCCCC---------Cchh---hhHHhhHHHHHHHHHHHhHhC---CCCEEEEecCCCCCcHHHHHHHHHHhCCCCCC
Q 024248 122 AGVPRKPG---------MTRD---DLFNINAGIVKTLCEGIAKCC---PKAIVNLISNPVNSTVPIAAEVFKKVGTYDPK 186 (270)
Q Consensus 122 ag~~~~~g---------~~r~---~~~~~N~~i~~~i~~~i~~~~---p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~ 186 (270)
+|.....+ .+.. ..+..|+.....+++.+.... ..+.++++|-.... + . ...++..
T Consensus 75 aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~----~----~-~~~~~~~ 145 (235)
T PRK09009 75 VGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGS----I----S-DNRLGGW 145 (235)
T ss_pred CccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccc----c----c-cCCCCCc
Confidence 98753211 1111 223445444444444443322 22456656522221 0 0 0013333
Q ss_pred CeeeechhhHHHHHHHHHHHhCCCCCccce
Q 024248 187 RLLGVTMLDVVRANTFVAEVLGLDPREVDV 216 (270)
Q Consensus 187 kviG~t~ldt~r~~~~lA~~l~v~~~~v~~ 216 (270)
-.++.++.....|-+.++..++-....+++
T Consensus 146 ~~Y~asK~a~~~~~~~la~e~~~~~~~i~v 175 (235)
T PRK09009 146 YSYRASKAALNMFLKTLSIEWQRSLKHGVV 175 (235)
T ss_pred chhhhhHHHHHHHHHHHHHHhhcccCCeEE
Confidence 456665554555777788776543334544
No 234
>PRK05876 short chain dehydrogenase; Provisional
Probab=97.68 E-value=0.0011 Score=59.30 Aligned_cols=116 Identities=16% Similarity=0.104 Sum_probs=64.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCcc-ee-eeeccCCHHHH-------hCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAV-VR-GFLGQQQLEDA-------LTGM 115 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~-~~-~i~~t~d~~~a-------l~~A 115 (270)
+.+.|+||+|.+|..++..|+.+|. +|++.|++.... ...++........ +. .+....++++. +...
T Consensus 7 k~vlVTGas~gIG~ala~~La~~G~--~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 84 (275)
T PRK05876 7 RGAVITGGASGIGLATGTEFARRGA--RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV 84 (275)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 4699999999999999999999998 899999875321 1222321110000 00 01111122222 2357
Q ss_pred CEEEEcCCCCCCC---CCch---hhhHHhhHHHHHHHHHH----HhHhCCCCEEEEecC
Q 024248 116 DIVIIPAGVPRKP---GMTR---DDLFNINAGIVKTLCEG----IAKCCPKAIVNLISN 164 (270)
Q Consensus 116 DvVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~sN 164 (270)
|++|+.+|..... ..+. ...+..|+.....+.+. +.+....+.++++|.
T Consensus 85 d~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS 143 (275)
T PRK05876 85 DVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTAS 143 (275)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCC
Confidence 9999999864211 1111 23345666555544444 433333456666654
No 235
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=97.68 E-value=0.0018 Score=56.97 Aligned_cols=165 Identities=15% Similarity=0.156 Sum_probs=87.5
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCcc-ee-eeeccCCHHHH-------hC
Q 024248 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAV-VR-GFLGQQQLEDA-------LT 113 (270)
Q Consensus 45 ~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~-~~-~i~~t~d~~~a-------l~ 113 (270)
+.++|.|+||+|.+|++++..|+.+|. +|++++++.... ...++........ +. .+....++++. ..
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~ 88 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGA--RVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFG 88 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 345899999999999999999999998 999999864321 1112221100000 00 01111112111 24
Q ss_pred CCCEEEEcCCCCCCCC---C---chhhhHHhhHHHHHHHHHHHhHh----CCCCEEEEecCCCCCcHHHHHHHHHHhCCC
Q 024248 114 GMDIVIIPAGVPRKPG---M---TRDDLFNINAGIVKTLCEGIAKC----CPKAIVNLISNPVNSTVPIAAEVFKKVGTY 183 (270)
Q Consensus 114 ~ADvVIi~ag~~~~~g---~---~r~~~~~~N~~i~~~i~~~i~~~----~p~a~viv~sNPv~~~~~i~t~~~~~~sg~ 183 (270)
..|+||+++|...... . ...+.+..|+.....+.+.+.++ .+.+.++++|..... . -....+
T Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~----~----~~~~~~ 160 (259)
T PRK08213 89 HVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGL----G----GNPPEV 160 (259)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhc----c----CCCccc
Confidence 6799999988532111 1 11234567888888888876554 233566666543221 0 000000
Q ss_pred CCCCeeeechhhHHHHHHHHHHHhCCCCCccceEEEcc
Q 024248 184 DPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGG 221 (270)
Q Consensus 184 p~~kviG~t~ldt~r~~~~lA~~l~v~~~~v~~~V~G~ 221 (270)
+...-++.++.....+-+.+++.++ +..+++.++..
T Consensus 161 ~~~~~Y~~sKa~~~~~~~~~a~~~~--~~gi~v~~v~P 196 (259)
T PRK08213 161 MDTIAYNTSKGAVINFTRALAAEWG--PHGIRVNAIAP 196 (259)
T ss_pred cCcchHHHHHHHHHHHHHHHHHHhc--ccCEEEEEEec
Confidence 1112234444434456666777764 34565555553
No 236
>PLN02996 fatty acyl-CoA reductase
Probab=97.68 E-value=0.00093 Score=65.24 Aligned_cols=107 Identities=20% Similarity=0.148 Sum_probs=66.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhC-CCccEEEEEeCCCC--hhH--H-HHhhcccc----------------Ccceeeee
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNT--PGV--T-ADISHMDT----------------NAVVRGFL 103 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~-g~~~eV~LvD~~~~--~~~--~-~dl~~~~~----------------~~~~~~i~ 103 (270)
.++|.|+||+||+|++++..|+.. .-..+|+++.+... ... . .++...+. ...+..+.
T Consensus 11 ~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i~ 90 (491)
T PLN02996 11 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVP 90 (491)
T ss_pred CCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEEe
Confidence 458999999999999999887754 34457888887542 110 0 11111000 01122111
Q ss_pred cc----------CC-HHHHhCCCCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHh
Q 024248 104 GQ----------QQ-LEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKC 153 (270)
Q Consensus 104 ~t----------~d-~~~al~~ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~ 153 (270)
+. .+ +++.++++|+||++|+... ...+..+....|+....++++.+.+.
T Consensus 91 GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~~a~~~ 150 (491)
T PLN02996 91 GDISYDDLGVKDSNLREEMWKEIDIVVNLAATTN-FDERYDVALGINTLGALNVLNFAKKC 150 (491)
T ss_pred cccCCcCCCCChHHHHHHHHhCCCEEEECccccC-CcCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 10 11 3456789999999997643 22334456788999999999998864
No 237
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.68 E-value=0.0011 Score=57.88 Aligned_cols=147 Identities=10% Similarity=0.006 Sum_probs=80.1
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCccee----eeeccCCHHHHhC-------C-
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVR----GFLGQQQLEDALT-------G- 114 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~----~i~~t~d~~~al~-------~- 114 (270)
++|.|+||+|.+|..++..|+..|. +|++.+.+... ...++.+... ..+. .+....+++++++ .
T Consensus 6 k~ilItGas~gIG~~la~~l~~~G~--~vv~~~~~~~~-~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 81 (253)
T PRK08642 6 QTVLVTGGSRGLGAAIARAFAREGA--RVVVNYHQSED-AAEALADELG-DRAIALQADVTDREQVQAMFATATEHFGKP 81 (253)
T ss_pred CEEEEeCCCCcHHHHHHHHHHHCCC--eEEEEcCCCHH-HHHHHHHHhC-CceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 4799999999999999999999998 88876653321 1111111000 0110 0111112222332 2
Q ss_pred CCEEEEcCCCCCC-------C--CCc---hhhhHHhhHHHHHHHHHHHhHh---CCCCEEEEecCCCCCcHHHHHHHHHH
Q 024248 115 MDIVIIPAGVPRK-------P--GMT---RDDLFNINAGIVKTLCEGIAKC---CPKAIVNLISNPVNSTVPIAAEVFKK 179 (270)
Q Consensus 115 ADvVIi~ag~~~~-------~--g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~sNPv~~~~~i~t~~~~~ 179 (270)
.|++|+++|.... + ..+ -.+.+..|+.....+++.+..+ ...+.+++++.....
T Consensus 82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~----------- 150 (253)
T PRK08642 82 ITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQ----------- 150 (253)
T ss_pred CeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCcccc-----------
Confidence 8999999875210 0 111 1234566666555555555432 223566666643221
Q ss_pred hCCCCCCCeeeechhhHHHHHHHHHHHhCC
Q 024248 180 VGTYDPKRLLGVTMLDVVRANTFVAEVLGL 209 (270)
Q Consensus 180 ~sg~p~~kviG~t~ldt~r~~~~lA~~l~v 209 (270)
...++.-.++.++.....+-+.+|+.++-
T Consensus 151 -~~~~~~~~Y~~sK~a~~~l~~~la~~~~~ 179 (253)
T PRK08642 151 -NPVVPYHDYTTAKAALLGLTRNLAAELGP 179 (253)
T ss_pred -CCCCCccchHHHHHHHHHHHHHHHHHhCc
Confidence 01222335777776667788888888754
No 238
>PRK08226 short chain dehydrogenase; Provisional
Probab=97.68 E-value=0.0014 Score=57.76 Aligned_cols=150 Identities=18% Similarity=0.174 Sum_probs=79.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCCh-hHHHHhhccccCcce-e-eeeccCCHHHH-------hCCC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTNAVV-R-GFLGQQQLEDA-------LTGM 115 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~-~~~~dl~~~~~~~~~-~-~i~~t~d~~~a-------l~~A 115 (270)
.+++.|+|++|.+|..++..|+.+|. +|++++++... ....++......... . .+....++++. +...
T Consensus 6 ~~~~lItG~s~giG~~la~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 83 (263)
T PRK08226 6 GKTALITGALQGIGEGIARVFARHGA--NLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRI 83 (263)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 45899999999999999999999998 99999987531 111122211000000 0 01111112222 2357
Q ss_pred CEEEEcCCCCCCC---CCc---hhhhHHhhHHHHHHHHHHHhHh---CCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCC
Q 024248 116 DIVIIPAGVPRKP---GMT---RDDLFNINAGIVKTLCEGIAKC---CPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPK 186 (270)
Q Consensus 116 DvVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~ 186 (270)
|+||+++|..... ..+ ....+..|+.....+.+.+.++ ...+.++++|.-.. .....+..
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~-----------~~~~~~~~ 152 (263)
T PRK08226 84 DILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTG-----------DMVADPGE 152 (263)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHh-----------cccCCCCc
Confidence 9999999863211 111 2234566776666666655433 22345655543211 00012222
Q ss_pred CeeeechhhHHHHHHHHHHHhC
Q 024248 187 RLLGVTMLDVVRANTFVAEVLG 208 (270)
Q Consensus 187 kviG~t~ldt~r~~~~lA~~l~ 208 (270)
-.++.++.....+-+.+++.+.
T Consensus 153 ~~Y~~sK~a~~~~~~~la~~~~ 174 (263)
T PRK08226 153 TAYALTKAAIVGLTKSLAVEYA 174 (263)
T ss_pred chHHHHHHHHHHHHHHHHHHhc
Confidence 3355544444456677777764
No 239
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.68 E-value=0.00091 Score=60.11 Aligned_cols=170 Identities=16% Similarity=0.149 Sum_probs=93.6
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC--hhHHHHhhcccc-Cccee--eeeccCCHHH-------H
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDT-NAVVR--GFLGQQQLED-------A 111 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~--~~~~~dl~~~~~-~~~~~--~i~~t~d~~~-------a 111 (270)
.+.+.++|+|||+-+|..+|..|+.+|+ +|+|+.++++ ...+.++.+... ...+. ++..+++.+. .
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~--~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~ 81 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGY--NLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKER 81 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhc
Confidence 3445899999999999999999999999 9999999864 233445554310 01110 1111222211 1
Q ss_pred hCCCCEEEEcCCCCCCCC------CchhhhHHhhHHHH----HHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhC
Q 024248 112 LTGMDIVIIPAGVPRKPG------MTRDDLFNINAGIV----KTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVG 181 (270)
Q Consensus 112 l~~ADvVIi~ag~~~~~g------~~r~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~s 181 (270)
....|+.|..||...... .+-.+++.-|+-.. +.+++.+.+. -.+.||+++.-... .+
T Consensus 82 ~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~-~~G~IiNI~S~ag~-----------~p 149 (265)
T COG0300 82 GGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVER-GAGHIINIGSAAGL-----------IP 149 (265)
T ss_pred CCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEechhhc-----------CC
Confidence 126899999998764221 12345677776554 4455555543 34567776543221 00
Q ss_pred CCCCCCeeeechhhHHHHHHHHHHHhCCCCCccceEEEccCCCCceeeccc
Q 024248 182 TYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLS 232 (270)
Q Consensus 182 g~p~~kviG~t~ldt~r~~~~lA~~l~v~~~~v~~~V~G~hg~~~~vp~~S 232 (270)
-|..-+++.|+---.-|-..|..++ ....|++.++.. |. +.-..|.
T Consensus 150 -~p~~avY~ATKa~v~~fSeaL~~EL--~~~gV~V~~v~P-G~-~~T~f~~ 195 (265)
T COG0300 150 -TPYMAVYSATKAFVLSFSEALREEL--KGTGVKVTAVCP-GP-TRTEFFD 195 (265)
T ss_pred -CcchHHHHHHHHHHHHHHHHHHHHh--cCCCeEEEEEec-Cc-ccccccc
Confidence 1333344444322223434444444 566677766663 23 3444554
No 240
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=97.68 E-value=0.00027 Score=66.66 Aligned_cols=53 Identities=19% Similarity=0.372 Sum_probs=44.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~a 122 (270)
.+||+|||+.|.+|..++..|...|+ +|+++|++.. ++.++++++||+||+++
T Consensus 98 ~~~I~IiGG~GlmG~slA~~l~~~G~--~V~~~d~~~~----------------------~~~~~~~~~aDlVilav 150 (374)
T PRK11199 98 LRPVVIVGGKGQLGRLFAKMLTLSGY--QVRILEQDDW----------------------DRAEDILADAGMVIVSV 150 (374)
T ss_pred cceEEEEcCCChhhHHHHHHHHHCCC--eEEEeCCCcc----------------------hhHHHHHhcCCEEEEeC
Confidence 46899999559999999999999998 9999998420 13457788999999996
No 241
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=97.68 E-value=0.0011 Score=57.55 Aligned_cols=114 Identities=19% Similarity=0.260 Sum_probs=65.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCcceee----eeccCCHHHHh-------
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAVVRG----FLGQQQLEDAL------- 112 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~~~~----i~~t~d~~~al------- 112 (270)
.++|+|+||+|++|..++..|+.+|. +|++++++.... ...++.... ..+.. +....++++.+
T Consensus 6 ~~~ilItGasg~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (251)
T PRK12826 6 GRVALVTGAARGIGRAIAVRLAADGA--EVIVVDICGDDAAATAELVEAAG--GKARARQVDVRDRAALKAAVAAGVEDF 81 (251)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 45899999999999999999999998 999999874311 112222110 11111 11111222222
Q ss_pred CCCCEEEEcCCCCCCC---CCch---hhhHHhhHHHHHHHHHHHh----HhCCCCEEEEecC
Q 024248 113 TGMDIVIIPAGVPRKP---GMTR---DDLFNINAGIVKTLCEGIA----KCCPKAIVNLISN 164 (270)
Q Consensus 113 ~~ADvVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~----~~~p~a~viv~sN 164 (270)
..+|+||+++|..... ..+. .+.+..|+.....+.+.+. +.. ...++++|.
T Consensus 82 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~ss 142 (251)
T PRK12826 82 GRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAG-GGRIVLTSS 142 (251)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEec
Confidence 3789999998764311 1111 2345666666666665553 322 345555553
No 242
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=97.68 E-value=0.0017 Score=56.09 Aligned_cols=117 Identities=25% Similarity=0.335 Sum_probs=64.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh---HHHHhhccccCcc-ee-eeeccCCHHHH-------hC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG---VTADISHMDTNAV-VR-GFLGQQQLEDA-------LT 113 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~---~~~dl~~~~~~~~-~~-~i~~t~d~~~a-------l~ 113 (270)
.++|.|+|++|++|..++..|++.|. +|+++.++.... ...++........ +. .+....++.++ +.
T Consensus 5 ~~~vlItG~sg~iG~~l~~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (248)
T PRK05557 5 GKVALVTGASRGIGRAIAERLAAQGA--NVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFG 82 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 35899999999999999999999998 887777654321 1112221111000 00 01111112222 24
Q ss_pred CCCEEEEcCCCCCCCC---Cch---hhhHHhhHHHHHHHHHHHhHhC---CCCEEEEecC
Q 024248 114 GMDIVIIPAGVPRKPG---MTR---DDLFNINAGIVKTLCEGIAKCC---PKAIVNLISN 164 (270)
Q Consensus 114 ~ADvVIi~ag~~~~~g---~~r---~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~sN 164 (270)
+.|+||+++|...... .+. ...+..|+.....+.+.+.++. ....++++|.
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss 142 (248)
T PRK05557 83 GVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISS 142 (248)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcc
Confidence 6899999998643211 111 1234567776666777666542 2345555553
No 243
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=97.68 E-value=0.0018 Score=56.45 Aligned_cols=114 Identities=18% Similarity=0.203 Sum_probs=63.3
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh-HHH-HhhccccCccee--eeeccC-------CHHHHhCCCC
Q 024248 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG-VTA-DISHMDTNAVVR--GFLGQQ-------QLEDALTGMD 116 (270)
Q Consensus 48 KI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~-~~~-dl~~~~~~~~~~--~i~~t~-------d~~~al~~AD 116 (270)
+|.|+|++|++|+.++..|+.+|. +|++++++.... ... ++.......... .+.... ..++.+.+.|
T Consensus 3 ~vlItGa~g~lG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 80 (255)
T TIGR01963 3 TALVTGAASGIGLAIALALAAAGA--NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD 80 (255)
T ss_pred EEEEcCCcchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 799999999999999999999998 999999975321 111 121110000000 011111 1223356789
Q ss_pred EEEEcCCCCCC-C--CCc---hhhhHHhhHHHHHHHHHHH----hHhCCCCEEEEecC
Q 024248 117 IVIIPAGVPRK-P--GMT---RDDLFNINAGIVKTLCEGI----AKCCPKAIVNLISN 164 (270)
Q Consensus 117 vVIi~ag~~~~-~--g~~---r~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~sN 164 (270)
+||++++.... + ..+ ....+..|......+.+.+ ++.. ...++++|.
T Consensus 81 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~~v~~ss 137 (255)
T TIGR01963 81 ILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG-WGRIINIAS 137 (255)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEEcc
Confidence 99999876421 1 111 1233455666555555554 3332 235555553
No 244
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=97.67 E-value=0.00023 Score=63.78 Aligned_cols=97 Identities=11% Similarity=0.127 Sum_probs=57.7
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHh------CC-CCEEEE
Q 024248 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDAL------TG-MDIVII 120 (270)
Q Consensus 48 KI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al------~~-ADvVIi 120 (270)
||+|+||+|++|++++..|++.|+ +|+++.++........... .. -.+...+++.+++ ++ +|.|++
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~--~V~~~~R~~~~~~~~~~~~----~~-~d~~d~~~l~~a~~~~~~~~g~~d~v~~ 73 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASV--PFLVASRSSSSSAGPNEKH----VK-FDWLDEDTWDNPFSSDDGMEPEISAVYL 73 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCC--cEEEEeCCCccccCCCCcc----cc-ccCCCHHHHHHHHhcccCcCCceeEEEE
Confidence 589999999999999999999998 9999998764211000000 00 0011122455666 67 999998
Q ss_pred cCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEec
Q 024248 121 PAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163 (270)
Q Consensus 121 ~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~s 163 (270)
+++... .. .+..+.+++.+++.+-+ .|++.|
T Consensus 74 ~~~~~~----~~-------~~~~~~~i~aa~~~gv~-~~V~~S 104 (285)
T TIGR03649 74 VAPPIP----DL-------APPMIKFIDFARSKGVR-RFVLLS 104 (285)
T ss_pred eCCCCC----Ch-------hHHHHHHHHHHHHcCCC-EEEEee
Confidence 765321 11 12335566666665433 344444
No 245
>PRK07023 short chain dehydrogenase; Provisional
Probab=97.67 E-value=0.00032 Score=61.12 Aligned_cols=35 Identities=17% Similarity=0.186 Sum_probs=31.9
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT 83 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~ 83 (270)
|||.|+||+|.+|..++..|+++|. +|++++++..
T Consensus 2 ~~vlItGasggiG~~ia~~l~~~G~--~v~~~~r~~~ 36 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQPGI--AVLGVARSRH 36 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHhCCC--EEEEEecCcc
Confidence 5899999999999999999999998 9999998753
No 246
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=97.67 E-value=0.0005 Score=63.81 Aligned_cols=63 Identities=21% Similarity=0.324 Sum_probs=48.8
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~a 122 (270)
...++|+|||. |.+|..+|..|...|+ +|+.+|++.... .+.. ..+.++++++++||+|+++.
T Consensus 144 l~g~~VgIIG~-G~IG~~vA~~L~~~G~--~V~~~d~~~~~~--~~~~-----------~~~~~l~ell~~aDiVil~l 206 (330)
T PRK12480 144 VKNMTVAIIGT-GRIGAATAKIYAGFGA--TITAYDAYPNKD--LDFL-----------TYKDSVKEAIKDADIISLHV 206 (330)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEEeCChhHh--hhhh-----------hccCCHHHHHhcCCEEEEeC
Confidence 45679999997 9999999999998898 999999864311 1110 12346888999999999986
No 247
>PRK06914 short chain dehydrogenase; Provisional
Probab=97.67 E-value=0.002 Score=57.34 Aligned_cols=35 Identities=14% Similarity=0.057 Sum_probs=31.4
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT 83 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~ 83 (270)
+.+.|+||+|++|..++..|+.+|+ +|++++++..
T Consensus 4 k~~lItGasg~iG~~la~~l~~~G~--~V~~~~r~~~ 38 (280)
T PRK06914 4 KIAIVTGASSGFGLLTTLELAKKGY--LVIATMRNPE 38 (280)
T ss_pred CEEEEECCCchHHHHHHHHHHhCCC--EEEEEeCCHH
Confidence 3689999999999999999999998 9999998753
No 248
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=97.67 E-value=0.00088 Score=61.11 Aligned_cols=64 Identities=16% Similarity=0.263 Sum_probs=46.3
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCC---CCEEEEcC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTG---MDIVIIPA 122 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~---ADvVIi~a 122 (270)
|||++||. |.+|+.++..|+..|+ +|+++|+++... ..+.+.. .....++++.+++ +|+||++.
T Consensus 1 m~Ig~IGl-G~mG~~mA~~L~~~g~--~v~v~dr~~~~~--~~~~~~g-------~~~~~s~~~~~~~~~~advVi~~v 67 (299)
T PRK12490 1 MKLGLIGL-GKMGGNMAERLREDGH--EVVGYDVNQEAV--DVAGKLG-------ITARHSLEELVSKLEAPRTIWVMV 67 (299)
T ss_pred CEEEEEcc-cHHHHHHHHHHHhCCC--EEEEEECCHHHH--HHHHHCC-------CeecCCHHHHHHhCCCCCEEEEEe
Confidence 68999997 9999999999999998 999999975322 2222211 1123466666655 69999986
No 249
>PRK07060 short chain dehydrogenase; Provisional
Probab=97.66 E-value=0.00073 Score=58.60 Aligned_cols=146 Identities=16% Similarity=0.115 Sum_probs=80.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCccee-eeeccCCHHHHh---CCCCEEEEc
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVR-GFLGQQQLEDAL---TGMDIVIIP 121 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~-~i~~t~d~~~al---~~ADvVIi~ 121 (270)
.+++.|+|++|++|..++..|+.+|+ +|++++++.... .++........+. .+....++++++ ...|+||++
T Consensus 9 ~~~~lItGa~g~iG~~~a~~l~~~g~--~V~~~~r~~~~~--~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ 84 (245)
T PRK07060 9 GKSVLVTGASSGIGRACAVALAQRGA--RVVAAARNAAAL--DRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNC 84 (245)
T ss_pred CCEEEEeCCcchHHHHHHHHHHHCCC--EEEEEeCCHHHH--HHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEEC
Confidence 35899999999999999999999998 999999875321 1111110000000 111111223333 357999999
Q ss_pred CCCCCCCC---Cc---hhhhHHhhHHHHHHHHHHHhHhC----CCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeeee
Q 024248 122 AGVPRKPG---MT---RDDLFNINAGIVKTLCEGIAKCC----PKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV 191 (270)
Q Consensus 122 ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i~~~~----p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG~ 191 (270)
+|...... .+ ....+..|+.....+++.+.+.. ..+.|+++|..... .+.+..-.++.
T Consensus 85 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~------------~~~~~~~~y~~ 152 (245)
T PRK07060 85 AGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAAL------------VGLPDHLAYCA 152 (245)
T ss_pred CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHc------------CCCCCCcHhHH
Confidence 98643211 11 12334567776666666665432 22566666532210 12233334555
Q ss_pred chhhHHHHHHHHHHHh
Q 024248 192 TMLDVVRANTFVAEVL 207 (270)
Q Consensus 192 t~ldt~r~~~~lA~~l 207 (270)
++....++.+.+++.+
T Consensus 153 sK~a~~~~~~~~a~~~ 168 (245)
T PRK07060 153 SKAALDAITRVLCVEL 168 (245)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5555556667777765
No 250
>PLN00016 RNA-binding protein; Provisional
Probab=97.66 E-value=0.00037 Score=65.38 Aligned_cols=99 Identities=19% Similarity=0.191 Sum_probs=61.0
Q ss_pred CCCCeEEEE----cCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHH---------HHhhccccCcceeeeec-cCCHH
Q 024248 44 SPGFKVAVL----GAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVT---------ADISHMDTNAVVRGFLG-QQQLE 109 (270)
Q Consensus 44 ~~~mKI~II----Ga~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~---------~dl~~~~~~~~~~~i~~-t~d~~ 109 (270)
.+++||.|+ ||+|++|++++..|+..|+ +|++++++...... .++... .+..+.+ ..|++
T Consensus 50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~l~~~----~v~~v~~D~~d~~ 123 (378)
T PLN00016 50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGH--EVTLFTRGKEPSQKMKKEPFSRFSELSSA----GVKTVWGDPADVK 123 (378)
T ss_pred cccceEEEEeccCCCceeEhHHHHHHHHHCCC--EEEEEecCCcchhhhccCchhhhhHhhhc----CceEEEecHHHHH
Confidence 445689999 9999999999999999999 99999987532110 111111 1111111 11233
Q ss_pred HHh--CCCCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEec
Q 024248 110 DAL--TGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163 (270)
Q Consensus 110 ~al--~~ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~s 163 (270)
+.+ .++|+||.+++. +....+.+++.+++...+ .+|.+|
T Consensus 124 ~~~~~~~~d~Vi~~~~~--------------~~~~~~~ll~aa~~~gvk-r~V~~S 164 (378)
T PLN00016 124 SKVAGAGFDVVYDNNGK--------------DLDEVEPVADWAKSPGLK-QFLFCS 164 (378)
T ss_pred hhhccCCccEEEeCCCC--------------CHHHHHHHHHHHHHcCCC-EEEEEc
Confidence 444 479999988642 123456677777765433 455444
No 251
>PRK12742 oxidoreductase; Provisional
Probab=97.66 E-value=0.0019 Score=55.79 Aligned_cols=148 Identities=16% Similarity=0.154 Sum_probs=79.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCC---HHHH---hCCCCEEE
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQ---LEDA---LTGMDIVI 119 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d---~~~a---l~~ADvVI 119 (270)
.++|.|+||+|.||..++..|+..|. +|++.++.... ...++.... ...... ...+| +.+. ....|++|
T Consensus 6 ~k~vlItGasggIG~~~a~~l~~~G~--~v~~~~~~~~~-~~~~l~~~~-~~~~~~-~D~~~~~~~~~~~~~~~~id~li 80 (237)
T PRK12742 6 GKKVLVLGGSRGIGAAIVRRFVTDGA--NVRFTYAGSKD-AAERLAQET-GATAVQ-TDSADRDAVIDVVRKSGALDILV 80 (237)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--EEEEecCCCHH-HHHHHHHHh-CCeEEe-cCCCCHHHHHHHHHHhCCCcEEE
Confidence 35799999999999999999999998 88887654321 111111100 000000 01112 2222 23579999
Q ss_pred EcCCCCCCCC---Cc---hhhhHHhhHHHHHHHHHHHhHh-CCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeeeec
Q 024248 120 IPAGVPRKPG---MT---RDDLFNINAGIVKTLCEGIAKC-CPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGVT 192 (270)
Q Consensus 120 i~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG~t 192 (270)
+++|...... .+ ....+..|+.....++..+.+. ...+.++++|.-... . ...+....++.+
T Consensus 81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~----------~-~~~~~~~~Y~~s 149 (237)
T PRK12742 81 VNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGD----------R-MPVAGMAAYAAS 149 (237)
T ss_pred ECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccc----------c-CCCCCCcchHHh
Confidence 9998642111 11 1234556665555554444332 234566665532210 0 013344556776
Q ss_pred hhhHHHHHHHHHHHhCC
Q 024248 193 MLDVVRANTFVAEVLGL 209 (270)
Q Consensus 193 ~ldt~r~~~~lA~~l~v 209 (270)
+.....+.+.+++.++-
T Consensus 150 Kaa~~~~~~~la~~~~~ 166 (237)
T PRK12742 150 KSALQGMARGLARDFGP 166 (237)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 65555677778887753
No 252
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=97.66 E-value=0.00026 Score=64.08 Aligned_cols=160 Identities=21% Similarity=0.174 Sum_probs=97.4
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhC--CCCEEEEcCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALT--GMDIVIIPAGV 124 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~--~ADvVIi~ag~ 124 (270)
|||.|+|++|.+|+.+...|. .+. +|+..|+.+ +|+.+.+ .+.+.++ .-|+||.+|..
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~~--~v~a~~~~~-----~Ditd~~------------~v~~~i~~~~PDvVIn~AAy 60 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GEF--EVIATDRAE-----LDITDPD------------AVLEVIRETRPDVVINAAAY 60 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CCc--eEEeccCcc-----ccccChH------------HHHHHHHhhCCCEEEECccc
Confidence 789999999999999998887 555 888888753 4555442 1334444 56999999875
Q ss_pred CCCC--CCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEec-CCCCCcHHHHHHHHHHhCCC-CCCCeeeechhhHHHHH
Q 024248 125 PRKP--GMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS-NPVNSTVPIAAEVFKKVGTY-DPKRLLGVTMLDVVRAN 200 (270)
Q Consensus 125 ~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~s-NPv~~~~~i~t~~~~~~sg~-p~~kviG~t~ldt~r~~ 200 (270)
..-. ..++..-+..|.....++++.+.+. ++++|.+| -.|---. -.. -++.+.. .|-.++|-+++..+.+-
T Consensus 61 t~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~--ga~lVhiSTDyVFDG~--~~~-~Y~E~D~~~P~nvYG~sKl~GE~~v 135 (281)
T COG1091 61 TAVDKAESEPELAFAVNATGAENLARAAAEV--GARLVHISTDYVFDGE--KGG-PYKETDTPNPLNVYGRSKLAGEEAV 135 (281)
T ss_pred cccccccCCHHHHHHhHHHHHHHHHHHHHHh--CCeEEEeecceEecCC--CCC-CCCCCCCCCChhhhhHHHHHHHHHH
Confidence 4311 1234445678999999999999876 45566554 2220000 000 0111122 35567888887665443
Q ss_pred HHHHHHhCCCCCccc-eEEEccCCCCceeecccccc
Q 024248 201 TFVAEVLGLDPREVD-VPVVGGHAGVTILPLLSQVK 235 (270)
Q Consensus 201 ~~lA~~l~v~~~~v~-~~V~G~hg~~~~vp~~S~~~ 235 (270)
+ ..+-+..-++ .+|+|++|++...+.+..+.
T Consensus 136 ~----~~~~~~~I~Rtswv~g~~g~nFv~tml~la~ 167 (281)
T COG1091 136 R----AAGPRHLILRTSWVYGEYGNNFVKTMLRLAK 167 (281)
T ss_pred H----HhCCCEEEEEeeeeecCCCCCHHHHHHHHhh
Confidence 3 3332222334 59999999743335555554
No 253
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=97.66 E-value=0.0021 Score=56.46 Aligned_cols=146 Identities=16% Similarity=0.109 Sum_probs=78.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh-HHHHhhccccCcc-ee-eeeccCCHHHH-------hCCC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG-VTADISHMDTNAV-VR-GFLGQQQLEDA-------LTGM 115 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~-~~~dl~~~~~~~~-~~-~i~~t~d~~~a-------l~~A 115 (270)
.+++.|+||+|++|.+++..|+.+|. +|+++|+++... ...++........ +. .+....+.+++ +...
T Consensus 8 ~k~vlVtGas~gIG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (260)
T PRK12823 8 GKVVVVTGAAQGIGRGVALRAAAEGA--RVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI 85 (260)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 45799999999999999999999998 999999874211 1122221110000 00 11111112222 2468
Q ss_pred CEEEEcCCCCC--CC--CCch---hhhHHhhHH----HHHHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCCC
Q 024248 116 DIVIIPAGVPR--KP--GMTR---DDLFNINAG----IVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYD 184 (270)
Q Consensus 116 DvVIi~ag~~~--~~--g~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p 184 (270)
|++|+++|... .+ ..+. ...+..|+. ..+.+.+.+.+.. .+.|+++|..... + +
T Consensus 86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~-------------~-~ 150 (260)
T PRK12823 86 DVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQG-GGAIVNVSSIATR-------------G-I 150 (260)
T ss_pred eEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEcCcccc-------------C-C
Confidence 99999997431 11 1111 122344543 3345555555432 3456655532210 0 1
Q ss_pred CCCeeeechhhHHHHHHHHHHHhC
Q 024248 185 PKRLLGVTMLDVVRANTFVAEVLG 208 (270)
Q Consensus 185 ~~kviG~t~ldt~r~~~~lA~~l~ 208 (270)
..-.++.++.....+.+.++..+.
T Consensus 151 ~~~~Y~~sK~a~~~~~~~la~e~~ 174 (260)
T PRK12823 151 NRVPYSAAKGGVNALTASLAFEYA 174 (260)
T ss_pred CCCccHHHHHHHHHHHHHHHHHhc
Confidence 122466666555567778888773
No 254
>PRK06196 oxidoreductase; Provisional
Probab=97.65 E-value=0.0004 Score=63.36 Aligned_cols=156 Identities=17% Similarity=0.084 Sum_probs=81.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhH--HHHhhcccc-CcceeeeeccCCHHHH-------hCCC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV--TADISHMDT-NAVVRGFLGQQQLEDA-------LTGM 115 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~--~~dl~~~~~-~~~~~~i~~t~d~~~a-------l~~A 115 (270)
.++|+|+||+|.+|..++..|+.+|. +|++++++..... ..++..... ... +....+++++ ....
T Consensus 26 ~k~vlITGasggIG~~~a~~L~~~G~--~Vv~~~R~~~~~~~~~~~l~~v~~~~~D---l~d~~~v~~~~~~~~~~~~~i 100 (315)
T PRK06196 26 GKTAIVTGGYSGLGLETTRALAQAGA--HVIVPARRPDVAREALAGIDGVEVVMLD---LADLESVRAFAERFLDSGRRI 100 (315)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhhhCeEEEcc---CCCHHHHHHHHHHHHhcCCCC
Confidence 35799999999999999999999998 9999998753221 112211100 000 1111112121 2468
Q ss_pred CEEEEcCCCCCCCC----CchhhhHHhhHHH----HHHHHHHHhHhCCCCEEEEecCCCCCcHHH-HHHHHHHhCCCCCC
Q 024248 116 DIVIIPAGVPRKPG----MTRDDLFNINAGI----VKTLCEGIAKCCPKAIVNLISNPVNSTVPI-AAEVFKKVGTYDPK 186 (270)
Q Consensus 116 DvVIi~ag~~~~~g----~~r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~sNPv~~~~~i-~t~~~~~~sg~p~~ 186 (270)
|++|++||....+. ......+..|... ++.+.+.+.+. ..+.|+++|........+ ... ......+++.
T Consensus 101 D~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-~~~~iV~vSS~~~~~~~~~~~~-~~~~~~~~~~ 178 (315)
T PRK06196 101 DILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAG-AGARVVALSSAGHRRSPIRWDD-PHFTRGYDKW 178 (315)
T ss_pred CEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCeEEEECCHHhccCCCCccc-cCccCCCChH
Confidence 99999998642211 1122335566555 45555555543 335666665321100000 000 0000112223
Q ss_pred CeeeechhhHHHHHHHHHHHhC
Q 024248 187 RLLGVTMLDVVRANTFVAEVLG 208 (270)
Q Consensus 187 kviG~t~ldt~r~~~~lA~~l~ 208 (270)
..++.++.....+.+.+++.+.
T Consensus 179 ~~Y~~SK~a~~~~~~~la~~~~ 200 (315)
T PRK06196 179 LAYGQSKTANALFAVHLDKLGK 200 (315)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc
Confidence 3456666666667777877763
No 255
>PRK05884 short chain dehydrogenase; Provisional
Probab=97.65 E-value=0.0016 Score=56.40 Aligned_cols=35 Identities=17% Similarity=0.217 Sum_probs=32.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT 83 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~ 83 (270)
||+.|+||+|.+|..++..|+.+|. +|++++++..
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g~--~v~~~~r~~~ 35 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDGH--KVTLVGARRD 35 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCCC--EEEEEeCCHH
Confidence 6899999999999999999999998 9999998753
No 256
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.65 E-value=0.00096 Score=58.72 Aligned_cols=157 Identities=17% Similarity=0.215 Sum_probs=83.9
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcc-ee-eeeccCCHHHH-------hCCCCE
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAV-VR-GFLGQQQLEDA-------LTGMDI 117 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~-~~-~i~~t~d~~~a-------l~~ADv 117 (270)
+++.|+||+|.+|..++..|+..|. +|++++++........+........ +. .+....++++. +...|+
T Consensus 9 k~~lItGas~gIG~aia~~l~~~G~--~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~ 86 (251)
T PRK12481 9 KVAIITGCNTGLGQGMAIGLAKAGA--DIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDI 86 (251)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC--EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4789999999999999999999999 9999987643221112211100000 00 01111122222 245799
Q ss_pred EEEcCCCCCCCC---Cc---hhhhHHhhHHHH----HHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCC
Q 024248 118 VIIPAGVPRKPG---MT---RDDLFNINAGIV----KTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKR 187 (270)
Q Consensus 118 VIi~ag~~~~~g---~~---r~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~k 187 (270)
+|.++|...... .+ ....+..|+... +.+.+.+.+....+.|+++|..... .+.+..-
T Consensus 87 lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~------------~~~~~~~ 154 (251)
T PRK12481 87 LINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSF------------QGGIRVP 154 (251)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhc------------CCCCCCc
Confidence 999998643211 11 223455665544 4444444433334667666543221 0122233
Q ss_pred eeeechhhHHHHHHHHHHHhCCCCCccceEEE
Q 024248 188 LLGVTMLDVVRANTFVAEVLGLDPREVDVPVV 219 (270)
Q Consensus 188 viG~t~ldt~r~~~~lA~~l~v~~~~v~~~V~ 219 (270)
.++.++..-..+-+.+|..+. +..|++..+
T Consensus 155 ~Y~asK~a~~~l~~~la~e~~--~~girvn~v 184 (251)
T PRK12481 155 SYTASKSAVMGLTRALATELS--QYNINVNAI 184 (251)
T ss_pred chHHHHHHHHHHHHHHHHHHh--hcCeEEEEE
Confidence 466665555567777777764 334544444
No 257
>PRK07679 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.65 E-value=0.00076 Score=60.85 Aligned_cols=70 Identities=16% Similarity=0.202 Sum_probs=48.1
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCC--ccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcC
Q 024248 45 PGFKVAVLGAAGGIGQPLAMLMKINPL--VSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (270)
Q Consensus 45 ~~mKI~IIGa~G~VGs~la~~l~~~g~--~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~a 122 (270)
+.|||++||+ |.+|.+++..|+..|. ..+|+++|++... ...++.... .+ ..+.+..+++++||+||++.
T Consensus 2 ~~mkI~~IG~-G~mG~aia~~l~~~g~~~~~~v~v~~r~~~~-~~~~l~~~~---g~---~~~~~~~e~~~~aDvVilav 73 (279)
T PRK07679 2 SIQNISFLGA-GSIAEAIIGGLLHANVVKGEQITVSNRSNET-RLQELHQKY---GV---KGTHNKKELLTDANILFLAM 73 (279)
T ss_pred CCCEEEEECc-cHHHHHHHHHHHHCCCCCcceEEEECCCCHH-HHHHHHHhc---Cc---eEeCCHHHHHhcCCEEEEEe
Confidence 4589999997 9999999999998872 2388999885421 122332210 11 12345667789999999986
No 258
>PRK07074 short chain dehydrogenase; Provisional
Probab=97.64 E-value=0.0015 Score=57.20 Aligned_cols=147 Identities=18% Similarity=0.149 Sum_probs=77.4
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCcceeeeeccCCHHHHh-------CCCCE
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAVVRGFLGQQQLEDAL-------TGMDI 117 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~~~~i~~t~d~~~al-------~~ADv 117 (270)
.++.|+||+|.+|..++..|+++|. +|++++++.... ...++.........-.+....++..++ .+.|+
T Consensus 3 k~ilItGat~~iG~~la~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 80 (257)
T PRK07074 3 RTALVTGAAGGIGQALARRFLAAGD--RVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDV 80 (257)
T ss_pred CEEEEECCcchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 3699999999999999999999998 999999875321 112221110000000011111222223 35899
Q ss_pred EEEcCCCCCCCC---Cch---hhhHHhhHHHHHHHHHHHhHh---CCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCe
Q 024248 118 VIIPAGVPRKPG---MTR---DDLFNINAGIVKTLCEGIAKC---CPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRL 188 (270)
Q Consensus 118 VIi~ag~~~~~g---~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kv 188 (270)
||+++|...... .+. ...+..|......+++.+... .....++++|..... ...+ .-.
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~----------~~~~---~~~ 147 (257)
T PRK07074 81 LVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGM----------AALG---HPA 147 (257)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhc----------CCCC---Ccc
Confidence 999998643211 111 112345665555555555322 233556555542210 0001 123
Q ss_pred eeechhhHHHHHHHHHHHhC
Q 024248 189 LGVTMLDVVRANTFVAEVLG 208 (270)
Q Consensus 189 iG~t~ldt~r~~~~lA~~l~ 208 (270)
++.++....++.+.+++.++
T Consensus 148 y~~sK~a~~~~~~~~a~~~~ 167 (257)
T PRK07074 148 YSAAKAGLIHYTKLLAVEYG 167 (257)
T ss_pred cHHHHHHHHHHHHHHHHHHh
Confidence 55555555567777887765
No 259
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=97.64 E-value=0.0004 Score=56.42 Aligned_cols=116 Identities=17% Similarity=0.218 Sum_probs=70.1
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHH---H--hhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 49 VAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTA---D--ISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 49 I~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~---d--l~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
|+|+|+ |.+|..+|..|.+.|+ +|.++++.+ ..... . +........+.......+..+....+|+||++.-
T Consensus 1 I~I~G~-GaiG~~~a~~L~~~g~--~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~viv~vK 76 (151)
T PF02558_consen 1 ILIIGA-GAIGSLYAARLAQAGH--DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAPSADAGPYDLVIVAVK 76 (151)
T ss_dssp EEEEST-SHHHHHHHHHHHHTTC--EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSHGHHHSTESEEEE-SS
T ss_pred CEEECc-CHHHHHHHHHHHHCCC--ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcchhccCCCcEEEEEec
Confidence 789998 9999999999999999 999999865 22111 0 1111100111111112222246789999999963
Q ss_pred CCCCCCCchhhhHHhhHHHHHHHHHHHhHhC-CCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeeee
Q 024248 124 VPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV 191 (270)
Q Consensus 124 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG~ 191 (270)
.. + ..++++.++.+. |++.++.+-|-.+. -+.+.+. +|++++++.
T Consensus 77 a~--------~--------~~~~l~~l~~~~~~~t~iv~~qNG~g~-----~~~l~~~--~~~~~v~~g 122 (151)
T PF02558_consen 77 AY--------Q--------LEQALQSLKPYLDPNTTIVSLQNGMGN-----EEVLAEY--FPRPRVLGG 122 (151)
T ss_dssp GG--------G--------HHHHHHHHCTGEETTEEEEEESSSSSH-----HHHHHCH--STGSGEEEE
T ss_pred cc--------c--------hHHHHHHHhhccCCCcEEEEEeCCCCc-----HHHHHHH--cCCCcEEEE
Confidence 21 1 144666677665 66678878888772 3444443 566777654
No 260
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.64 E-value=0.0012 Score=56.91 Aligned_cols=113 Identities=19% Similarity=0.220 Sum_probs=61.9
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh---HHHHhhccccCcceee----eeccCCHHHH-------h
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG---VTADISHMDTNAVVRG----FLGQQQLEDA-------L 112 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~---~~~dl~~~~~~~~~~~----i~~t~d~~~a-------l 112 (270)
++|.|+||+|.+|..++..|+++|+ +|+++.+..... ...++.... ..+.. +....+++++ +
T Consensus 7 ~~vlItGasg~iG~~l~~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~ 82 (249)
T PRK12825 7 RVALVTGAARGLGRAIALRLARAGA--DVVVHYRSDEEAAEELVEAVEALG--RRAQAVQADVTDKAALEAAVAAAVERF 82 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeCCCHHHHHHHHHHHHhcC--CceEEEECCcCCHHHHHHHHHHHHHHc
Confidence 4899999999999999999999999 877766543211 111121111 11111 1111122222 2
Q ss_pred CCCCEEEEcCCCCCCCC---Cc---hhhhHHhhHHHHHHHHHHHhHh---CCCCEEEEec
Q 024248 113 TGMDIVIIPAGVPRKPG---MT---RDDLFNINAGIVKTLCEGIAKC---CPKAIVNLIS 163 (270)
Q Consensus 113 ~~ADvVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~s 163 (270)
.+.|+||+++|...... .+ ..+.+..|+.....+.+.+.++ .....++++|
T Consensus 83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~S 142 (249)
T PRK12825 83 GRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNIS 142 (249)
T ss_pred CCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 46799999998542211 11 1234566666666666665321 2234555555
No 261
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.63 E-value=0.0012 Score=57.04 Aligned_cols=117 Identities=22% Similarity=0.297 Sum_probs=63.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEE-eCCCChh--HHHHhhccccCcceee--eeccCCHHHHh-------C
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLY-DVVNTPG--VTADISHMDTNAVVRG--FLGQQQLEDAL-------T 113 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~Lv-D~~~~~~--~~~dl~~~~~~~~~~~--i~~t~d~~~al-------~ 113 (270)
.++|.|+||+|++|..++..|++.|+ +|+++ +++.... ....+........+.. +....++.+.+ .
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~--~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGA--KVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFG 82 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 34899999999999999999999998 88888 8865321 1112221100010000 11111122222 2
Q ss_pred CCCEEEEcCCCCCCCC---Cc---hhhhHHhhHHHHHHHHHHHhHhC---CCCEEEEecC
Q 024248 114 GMDIVIIPAGVPRKPG---MT---RDDLFNINAGIVKTLCEGIAKCC---PKAIVNLISN 164 (270)
Q Consensus 114 ~ADvVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~sN 164 (270)
..|+||+++|...... .+ ....+..|......+.+.+.... ....++++|.
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS 142 (247)
T PRK05565 83 KIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISS 142 (247)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECC
Confidence 7899999988642111 11 12345667766555555554332 2234555553
No 262
>PRK06523 short chain dehydrogenase; Provisional
Probab=97.63 E-value=0.00045 Score=60.73 Aligned_cols=152 Identities=16% Similarity=0.224 Sum_probs=81.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhH-------HHHhhccccCcceeeeeccCCHHHHhCCCCEE
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV-------TADISHMDTNAVVRGFLGQQQLEDALTGMDIV 118 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~-------~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvV 118 (270)
.++|.|+||+|.+|..++..|++.|. +|++++++..... ..|+.+.+ .+..+ .....+.+...|+|
T Consensus 9 ~k~vlItGas~gIG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~D~~~~~---~~~~~--~~~~~~~~~~id~v 81 (260)
T PRK06523 9 GKRALVTGGTKGIGAATVARLLEAGA--RVVTTARSRPDDLPEGVEFVAADLTTAE---GCAAV--ARAVLERLGGVDIL 81 (260)
T ss_pred CCEEEEECCCCchhHHHHHHHHHCCC--EEEEEeCChhhhcCCceeEEecCCCCHH---HHHHH--HHHHHHHcCCCCEE
Confidence 45899999999999999999999998 9999998753210 01111110 00000 00122334578999
Q ss_pred EEcCCCCCCC-C----Cc---hhhhHHhhHHHH----HHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCCC-C
Q 024248 119 IIPAGVPRKP-G----MT---RDDLFNINAGIV----KTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYD-P 185 (270)
Q Consensus 119 Ii~ag~~~~~-g----~~---r~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p-~ 185 (270)
|+++|..... + .+ ....+..|+... +.+++.+++.. .+.++++|..... .+.+ .
T Consensus 82 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS~~~~------------~~~~~~ 148 (260)
T PRK06523 82 VHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARG-SGVIIHVTSIQRR------------LPLPES 148 (260)
T ss_pred EECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEeccccc------------CCCCCC
Confidence 9999853211 1 11 223345565544 44455555432 3556666643321 0122 2
Q ss_pred CCeeeechhhHHHHHHHHHHHhCCCCCccceEEE
Q 024248 186 KRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVV 219 (270)
Q Consensus 186 ~kviG~t~ldt~r~~~~lA~~l~v~~~~v~~~V~ 219 (270)
.-.++.++.....+.+.++..++ +..+++.++
T Consensus 149 ~~~Y~~sK~a~~~l~~~~a~~~~--~~gi~v~~i 180 (260)
T PRK06523 149 TTAYAAAKAALSTYSKSLSKEVA--PKGVRVNTV 180 (260)
T ss_pred cchhHHHHHHHHHHHHHHHHHHh--hcCcEEEEE
Confidence 33455555444556667777653 334544333
No 263
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=97.63 E-value=0.0011 Score=57.08 Aligned_cols=155 Identities=17% Similarity=0.192 Sum_probs=83.4
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC-h--hHHHHhhccccCccee--eeeccCCHHHHh-------CCCC
Q 024248 49 VAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-P--GVTADISHMDTNAVVR--GFLGQQQLEDAL-------TGMD 116 (270)
Q Consensus 49 I~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~-~--~~~~dl~~~~~~~~~~--~i~~t~d~~~al-------~~AD 116 (270)
|.|+|++|++|..++..|+++|+ +|+++++... . ....++.+........ .+....++++++ ...|
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 78 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGA--KVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPID 78 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 46999999999999999999998 8999988642 1 1122332211111111 011111222333 3469
Q ss_pred EEEEcCCCCCCC---C---CchhhhHHhhHHHHHHHHHHHhHhC---CCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCC
Q 024248 117 IVIIPAGVPRKP---G---MTRDDLFNINAGIVKTLCEGIAKCC---PKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKR 187 (270)
Q Consensus 117 vVIi~ag~~~~~---g---~~r~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~k 187 (270)
+||+++|..... + ......+..|+.....+.+.+.++. ....++++|..... .+.|..-
T Consensus 79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~------------~g~~~~~ 146 (239)
T TIGR01830 79 ILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGL------------MGNAGQA 146 (239)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCcccc------------CCCCCCc
Confidence 999999864211 1 1123456677777777777766542 23456666543321 0233333
Q ss_pred eeeechhhHHHHHHHHHHHhCCCCCccceEEE
Q 024248 188 LLGVTMLDVVRANTFVAEVLGLDPREVDVPVV 219 (270)
Q Consensus 188 viG~t~ldt~r~~~~lA~~l~v~~~~v~~~V~ 219 (270)
.++.++.....+.+.+++.++. ..+.+.++
T Consensus 147 ~y~~~k~a~~~~~~~l~~~~~~--~g~~~~~i 176 (239)
T TIGR01830 147 NYAASKAGVIGFTKSLAKELAS--RNITVNAV 176 (239)
T ss_pred hhHHHHHHHHHHHHHHHHHHhh--cCeEEEEE
Confidence 4555544334455666666542 34444444
No 264
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=97.63 E-value=0.00027 Score=61.47 Aligned_cols=94 Identities=16% Similarity=0.187 Sum_probs=60.4
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCccee-eeeccCCHHHHhCCCCEEEEcCCCCCC
Q 024248 49 VAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVR-GFLGQQQLEDALTGMDIVIIPAGVPRK 127 (270)
Q Consensus 49 I~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~-~i~~t~d~~~al~~ADvVIi~ag~~~~ 127 (270)
|+|+||+|.+|++++..|+..++ +|.++=++........+.+... ..+. .+....++.++++|+|.||++.+...
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~--~V~~l~R~~~~~~~~~l~~~g~-~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~- 76 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGF--SVRALVRDPSSDRAQQLQALGA-EVVEADYDDPESLVAALKGVDAVFSVTPPSH- 76 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTG--CEEEEESSSHHHHHHHHHHTTT-EEEES-TT-HHHHHHHHTTCSEEEEESSCSC-
T ss_pred CEEECCccHHHHHHHHHHHhCCC--CcEEEEeccchhhhhhhhcccc-eEeecccCCHHHHHHHHcCCceEEeecCcch-
Confidence 78999999999999999999887 8999888753222333333211 0010 01112346778999999999875432
Q ss_pred CCCchhhhHHhhHHHHHHHHHHHhHhCC
Q 024248 128 PGMTRDDLFNINAGIVKTLCEGIAKCCP 155 (270)
Q Consensus 128 ~g~~r~~~~~~N~~i~~~i~~~i~~~~p 155 (270)
..+ .+...++++++++.+-
T Consensus 77 --~~~-------~~~~~~li~Aa~~agV 95 (233)
T PF05368_consen 77 --PSE-------LEQQKNLIDAAKAAGV 95 (233)
T ss_dssp --CCH-------HHHHHHHHHHHHHHT-
T ss_pred --hhh-------hhhhhhHHHhhhcccc
Confidence 111 3445778888887763
No 265
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=97.63 E-value=0.0025 Score=55.49 Aligned_cols=114 Identities=14% Similarity=0.182 Sum_probs=64.4
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC-h--hHHHHhhccccCcceee----eeccCCHHHHh-------
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-P--GVTADISHMDTNAVVRG----FLGQQQLEDAL------- 112 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~-~--~~~~dl~~~~~~~~~~~----i~~t~d~~~al------- 112 (270)
.++.|+|++|.+|..++..|+.+|. +|++.+.... . ....++.+.. ..+.. +.....+.+++
T Consensus 7 ~~~lItG~s~~iG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (247)
T PRK12935 7 KVAIVTGGAKGIGKAITVALAQEGA--KVVINYNSSKEAAENLVNELGKEG--HDVYAVQADVSKVEDANRLVEEAVNHF 82 (247)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCC--EEEEEcCCcHHHHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4799999999999999999999998 8877654321 1 1112332211 11111 11111122222
Q ss_pred CCCCEEEEcCCCCCCCC------CchhhhHHhhHHHHHHHHHHHhHh---CCCCEEEEecC
Q 024248 113 TGMDIVIIPAGVPRKPG------MTRDDLFNINAGIVKTLCEGIAKC---CPKAIVNLISN 164 (270)
Q Consensus 113 ~~ADvVIi~ag~~~~~g------~~r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~sN 164 (270)
...|+||+++|...... ....+.+..|+.....+++.+..+ ...+.++++|.
T Consensus 83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS 143 (247)
T PRK12935 83 GKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISS 143 (247)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcc
Confidence 34799999998643211 112344667777666666666543 23456666654
No 266
>PRK12367 short chain dehydrogenase; Provisional
Probab=97.62 E-value=0.00083 Score=59.44 Aligned_cols=104 Identities=16% Similarity=0.229 Sum_probs=62.9
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCccee-eeeccCCHHHHhCCCCEEEEcCC
Q 024248 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVR-GFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 45 ~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~-~i~~t~d~~~al~~ADvVIi~ag 123 (270)
+.+++.|+||+|.+|..++..|+.+|. +|++++++....... ..+. ....+. .+....++++.+...|++|.+||
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~--~Vi~~~r~~~~~~~~-~~~~-~~~~~~~D~~~~~~~~~~~~~iDilVnnAG 88 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGA--KVIGLTHSKINNSES-NDES-PNEWIKWECGKEESLDKQLASLDVLILNHG 88 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC--EEEEEECCchhhhhh-hccC-CCeEEEeeCCCHHHHHHhcCCCCEEEECCc
Confidence 345899999999999999999999998 999999875211111 0111 000011 11112234455678999999998
Q ss_pred CCCCCCCc---hhhhHHhhHHHHHHHHHHHhH
Q 024248 124 VPRKPGMT---RDDLFNINAGIVKTLCEGIAK 152 (270)
Q Consensus 124 ~~~~~g~~---r~~~~~~N~~i~~~i~~~i~~ 152 (270)
.......+ ..+.+..|+.....+++.+..
T Consensus 89 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 120 (245)
T PRK12367 89 INPGGRQDPENINKALEINALSSWRLLELFED 120 (245)
T ss_pred cCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 64322222 234567787666555555443
No 267
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=97.62 E-value=0.0014 Score=57.49 Aligned_cols=116 Identities=20% Similarity=0.276 Sum_probs=64.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCccee--eeeccCCHHHH-------hCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAVVR--GFLGQQQLEDA-------LTGM 115 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~~~--~i~~t~d~~~a-------l~~A 115 (270)
.++.|+||+|.+|..++..|+..|. +|++.|++.... ...++.+........ .+....++++. +...
T Consensus 10 k~~lItGas~giG~~ia~~L~~~G~--~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 87 (254)
T PRK08085 10 KNILITGSAQGIGFLLATGLAEYGA--EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI 87 (254)
T ss_pred CEEEEECCCChHHHHHHHHHHHcCC--EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence 4799999999999999999999998 999999875321 122232211000000 01111112221 2357
Q ss_pred CEEEEcCCCCCCC---CCc---hhhhHHhhHHHHHHHHHHHhHh---CCCCEEEEecC
Q 024248 116 DIVIIPAGVPRKP---GMT---RDDLFNINAGIVKTLCEGIAKC---CPKAIVNLISN 164 (270)
Q Consensus 116 DvVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~sN 164 (270)
|+||+++|..... ..+ ....+..|+.....+.+.+.+. ...+.|+++|.
T Consensus 88 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS 145 (254)
T PRK08085 88 DVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICS 145 (254)
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcc
Confidence 9999999864211 111 2234566765555555555443 23456666653
No 268
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=97.61 E-value=0.0012 Score=60.27 Aligned_cols=64 Identities=16% Similarity=0.229 Sum_probs=45.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCC---CCEEEEcC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTG---MDIVIIPA 122 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~---ADvVIi~a 122 (270)
|||+|||. |.+|+.++..|+..|+ +|+++|+++... .++.+.. . ....++++.++. +|+||++.
T Consensus 1 m~Ig~IGl-G~MG~~mA~~L~~~g~--~v~v~dr~~~~~--~~~~~~g----~---~~~~~~~e~~~~~~~~dvvi~~v 67 (301)
T PRK09599 1 MQLGMIGL-GRMGGNMARRLLRGGH--EVVGYDRNPEAV--EALAEEG----A---TGADSLEELVAKLPAPRVVWLMV 67 (301)
T ss_pred CEEEEEcc-cHHHHHHHHHHHHCCC--eEEEEECCHHHH--HHHHHCC----C---eecCCHHHHHhhcCCCCEEEEEe
Confidence 68999997 9999999999999998 999999975422 2222211 1 113355555554 69999986
No 269
>PRK05854 short chain dehydrogenase; Provisional
Probab=97.61 E-value=0.00067 Score=62.03 Aligned_cols=170 Identities=18% Similarity=0.071 Sum_probs=87.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCcceeee-eccCCH---HH-------Hh
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAVVRGF-LGQQQL---ED-------AL 112 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~~~~i-~~t~d~---~~-------al 112 (270)
.+++.|+||+|.+|..++..|+..|. +|++.+++.... ...++........+..+ ..-.|+ ++ ..
T Consensus 14 gk~~lITGas~GIG~~~a~~La~~G~--~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~ 91 (313)
T PRK05854 14 GKRAVVTGASDGLGLGLARRLAAAGA--EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEG 91 (313)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence 45799999999999999999999998 999999875422 12233221101111110 011121 11 12
Q ss_pred CCCCEEEEcCCCCCCCC--Cc---hhhhHHhhHHH----HHHHHHHHhHhCCCCEEEEecCCCCCcHHHHH-HHHHHhCC
Q 024248 113 TGMDIVIIPAGVPRKPG--MT---RDDLFNINAGI----VKTLCEGIAKCCPKAIVNLISNPVNSTVPIAA-EVFKKVGT 182 (270)
Q Consensus 113 ~~ADvVIi~ag~~~~~g--~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t-~~~~~~sg 182 (270)
...|++|..||....+. .+ ....+..|... ++.+.+.+++. .+.|+++|.-..... .+. .-+.....
T Consensus 92 ~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~--~~riv~vsS~~~~~~-~~~~~~~~~~~~ 168 (313)
T PRK05854 92 RPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG--RARVTSQSSIAARRG-AINWDDLNWERS 168 (313)
T ss_pred CCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC--CCCeEEEechhhcCC-CcCccccccccc
Confidence 45899999998643211 11 12234556544 44555555432 345555553221000 000 00000011
Q ss_pred CCCCCeeeechhhHHHHHHHHHHHhCCCCCccceEEEc
Q 024248 183 YDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (270)
Q Consensus 183 ~p~~kviG~t~ldt~r~~~~lA~~l~v~~~~v~~~V~G 220 (270)
++....++.+++....+-+.+++++......|.+..+.
T Consensus 169 ~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~ 206 (313)
T PRK05854 169 YAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAH 206 (313)
T ss_pred CcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEe
Confidence 33344566777766677778887665444445544443
No 270
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=97.61 E-value=0.0026 Score=55.91 Aligned_cols=157 Identities=14% Similarity=0.162 Sum_probs=83.4
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcc-ee-eeeccCCHHHH-------hCCCCE
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAV-VR-GFLGQQQLEDA-------LTGMDI 117 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~-~~-~i~~t~d~~~a-------l~~ADv 117 (270)
..+.|+|++|.+|..++..|++.|. +|+++|+........++........ +. .+....++++. +...|+
T Consensus 11 k~~lItG~~~gIG~a~a~~l~~~G~--~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~ 88 (253)
T PRK08993 11 KVAVVTGCDTGLGQGMALGLAEAGC--DIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDI 88 (253)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC--EEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4699999999999999999999998 9999987643222222221110000 00 01111112222 236899
Q ss_pred EEEcCCCCCCC---CC---chhhhHHhhHHHHHHHHHHHh----HhCCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCC
Q 024248 118 VIIPAGVPRKP---GM---TRDDLFNINAGIVKTLCEGIA----KCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKR 187 (270)
Q Consensus 118 VIi~ag~~~~~---g~---~r~~~~~~N~~i~~~i~~~i~----~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~k 187 (270)
+|+++|..... +. +....+..|+.....+.+.+. +..+.+.++++|.-... . +-+..-
T Consensus 89 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~----------~--~~~~~~ 156 (253)
T PRK08993 89 LVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSF----------Q--GGIRVP 156 (253)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhc----------c--CCCCCc
Confidence 99999864211 11 123345677665555555443 32344666666543220 0 112223
Q ss_pred eeeechhhHHHHHHHHHHHhCCCCCccceEEE
Q 024248 188 LLGVTMLDVVRANTFVAEVLGLDPREVDVPVV 219 (270)
Q Consensus 188 viG~t~ldt~r~~~~lA~~l~v~~~~v~~~V~ 219 (270)
.++.++.....+-+.+|..+. +..+++..+
T Consensus 157 ~Y~~sKaa~~~~~~~la~e~~--~~gi~v~~v 186 (253)
T PRK08993 157 SYTASKSGVMGVTRLMANEWA--KHNINVNAI 186 (253)
T ss_pred chHHHHHHHHHHHHHHHHHhh--hhCeEEEEE
Confidence 455655444456677777764 334544333
No 271
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=97.61 E-value=0.0011 Score=57.81 Aligned_cols=152 Identities=18% Similarity=0.172 Sum_probs=80.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCccee-eeeccCCHHHH-------hCCCCE
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVR-GFLGQQQLEDA-------LTGMDI 117 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~-~i~~t~d~~~a-------l~~ADv 117 (270)
.+++.|+|++|++|+.++..|+++|+ +|++++++.... ..... ..+. .+....++++. +...|+
T Consensus 8 ~k~vlItGas~~iG~~la~~l~~~G~--~v~~~~~~~~~~-----~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 79 (252)
T PRK08220 8 GKTVWVTGAAQGIGYAVALAFVEAGA--KVIGFDQAFLTQ-----EDYPF-ATFVLDVSDAAAVAQVCQRLLAETGPLDV 79 (252)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEecchhhh-----cCCce-EEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 35799999999999999999999998 999999865100 00000 0000 00001112222 345799
Q ss_pred EEEcCCCCCCCC---Cc---hhhhHHhhHHHHHHHHHHHhHh---CCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCe
Q 024248 118 VIIPAGVPRKPG---MT---RDDLFNINAGIVKTLCEGIAKC---CPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRL 188 (270)
Q Consensus 118 VIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kv 188 (270)
||.++|...... .+ ....+..|......+++.+... ...+.++++|.-... .+.+..-.
T Consensus 80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~------------~~~~~~~~ 147 (252)
T PRK08220 80 LVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAH------------VPRIGMAA 147 (252)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhc------------cCCCCCch
Confidence 999988642111 11 1234566766555555555332 233456555532210 01222223
Q ss_pred eeechhhHHHHHHHHHHHhCCCCCccceEEE
Q 024248 189 LGVTMLDVVRANTFVAEVLGLDPREVDVPVV 219 (270)
Q Consensus 189 iG~t~ldt~r~~~~lA~~l~v~~~~v~~~V~ 219 (270)
++.++.....+.+.+++.+. +..+++.++
T Consensus 148 Y~~sK~a~~~~~~~la~e~~--~~~i~v~~i 176 (252)
T PRK08220 148 YGASKAALTSLAKCVGLELA--PYGVRCNVV 176 (252)
T ss_pred hHHHHHHHHHHHHHHHHHhh--HhCeEEEEE
Confidence 45554444456667777653 334444333
No 272
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.60 E-value=0.0016 Score=57.87 Aligned_cols=112 Identities=18% Similarity=0.154 Sum_probs=61.7
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCccee-eeeccCCHHHH-------hCCCCEEE
Q 024248 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVR-GFLGQQQLEDA-------LTGMDIVI 119 (270)
Q Consensus 48 KI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~-~i~~t~d~~~a-------l~~ADvVI 119 (270)
++.|+||+|.+|..++..|+..|+ +|++++++.... .++..... ..+. .+....++++. ....|+||
T Consensus 3 ~vlItGasggiG~~la~~l~~~G~--~V~~~~r~~~~~--~~~~~~~~-~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi 77 (274)
T PRK05693 3 VVLITGCSSGIGRALADAFKAAGY--EVWATARKAEDV--EALAAAGF-TAVQLDVNDGAALARLAEELEAEHGGLDVLI 77 (274)
T ss_pred EEEEecCCChHHHHHHHHHHHCCC--EEEEEeCCHHHH--HHHHHCCC-eEEEeeCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 699999999999999999999998 999999875321 11211100 0010 01111112222 24689999
Q ss_pred EcCCCCCCC---CCc---hhhhHHhhHHHHHHHHHHHhHhC--CCCEEEEecC
Q 024248 120 IPAGVPRKP---GMT---RDDLFNINAGIVKTLCEGIAKCC--PKAIVNLISN 164 (270)
Q Consensus 120 i~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~sN 164 (270)
+++|..... ..+ ....+..|+.....+.+.+.... ..+.+++++.
T Consensus 78 ~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS 130 (274)
T PRK05693 78 NNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGS 130 (274)
T ss_pred ECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECC
Confidence 999864211 111 12334566655544555443221 1355666654
No 273
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=97.60 E-value=0.00062 Score=60.13 Aligned_cols=149 Identities=18% Similarity=0.206 Sum_probs=80.4
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhH-------HHHhhccccCcceeeeeccCCHHHHhCCCCEEE
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV-------TADISHMDTNAVVRGFLGQQQLEDALTGMDIVI 119 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~-------~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVI 119 (270)
+++.|+|++|.+|..++..|+.+|. +|++.|++..... ..|+.+.. .+... .....+.+...|++|
T Consensus 10 k~vlItG~s~gIG~~la~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~--~~~~~~~~g~id~li 82 (266)
T PRK06171 10 KIIIVTGGSSGIGLAIVKELLANGA--NVVNADIHGGDGQHENYQFVPTDVSSAE---EVNHT--VAEIIEKFGRIDGLV 82 (266)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCccccccCceEEEEccCCCHH---HHHHH--HHHHHHHcCCCCEEE
Confidence 4799999999999999999999998 9999998753211 01221110 00000 001112234679999
Q ss_pred EcCCCCCCC------------CCc---hhhhHHhhHHHHHHHHHHHhHhC---CCCEEEEecCCCCCcHHHHHHHHHHhC
Q 024248 120 IPAGVPRKP------------GMT---RDDLFNINAGIVKTLCEGIAKCC---PKAIVNLISNPVNSTVPIAAEVFKKVG 181 (270)
Q Consensus 120 i~ag~~~~~------------g~~---r~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~sNPv~~~~~i~t~~~~~~s 181 (270)
+++|..... ..+ ....+..|+.....+++.+.++. ..+.|+++|..... .
T Consensus 83 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~------------~ 150 (266)
T PRK06171 83 NNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGL------------E 150 (266)
T ss_pred ECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEcccccc------------C
Confidence 999863210 011 12245667666666666655432 23556666543321 0
Q ss_pred CCCCCCeeeechhhHHHHHHHHHHHhCCCCCccce
Q 024248 182 TYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDV 216 (270)
Q Consensus 182 g~p~~kviG~t~ldt~r~~~~lA~~l~v~~~~v~~ 216 (270)
+.+..-.++.++..-..+-+.++..+. +..|++
T Consensus 151 ~~~~~~~Y~~sK~a~~~l~~~la~e~~--~~gi~v 183 (266)
T PRK06171 151 GSEGQSCYAATKAALNSFTRSWAKELG--KHNIRV 183 (266)
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHHhh--hcCeEE
Confidence 122223345543333445666777664 334544
No 274
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=97.60 E-value=0.00049 Score=61.79 Aligned_cols=103 Identities=22% Similarity=0.273 Sum_probs=64.6
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhC-CCCEEEEcCCCCCC
Q 024248 49 VAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALT-GMDIVIIPAGVPRK 127 (270)
Q Consensus 49 I~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~-~ADvVIi~ag~~~~ 127 (270)
|+|+|++|+||+++...|...|+ +|+.+-++...... ..+.... . -+.+++... ++|+||..||.+--
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh--~v~iltR~~~~~~~--~~~~~v~-~------~~~~~~~~~~~~DavINLAG~~I~ 69 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGH--QVTILTRRPPKASQ--NLHPNVT-L------WEGLADALTLGIDAVINLAGEPIA 69 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCC--eEEEEEcCCcchhh--hcCcccc-c------cchhhhcccCCCCEEEECCCCccc
Confidence 68999999999999999999999 99999887643211 1111100 1 112333333 79999999997632
Q ss_pred CC---Cc-hhhhHHhhHHHHHHHHHHHhHhCCCC-EEEEe
Q 024248 128 PG---MT-RDDLFNINAGIVKTLCEGIAKCCPKA-IVNLI 162 (270)
Q Consensus 128 ~g---~~-r~~~~~~N~~i~~~i~~~i~~~~p~a-~viv~ 162 (270)
.. .. ...+..--+...+.+.+.|.+..... .+|+.
T Consensus 70 ~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isa 109 (297)
T COG1090 70 ERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISA 109 (297)
T ss_pred cccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEec
Confidence 11 11 12233334567788888888665444 34433
No 275
>PRK07063 short chain dehydrogenase; Provisional
Probab=97.60 E-value=0.002 Score=56.70 Aligned_cols=158 Identities=18% Similarity=0.158 Sum_probs=84.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCcceee----eeccCCHHHH-------h
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAVVRG----FLGQQQLEDA-------L 112 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~~~~----i~~t~d~~~a-------l 112 (270)
.+++.|+|++|.+|..++..|+++|. +|+++|+++... ...++........+.. +....+++++ +
T Consensus 7 ~k~vlVtGas~gIG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (260)
T PRK07063 7 GKVALVTGAAQGIGAAIARAFAREGA--AVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF 84 (260)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 34799999999999999999999998 999999975421 1223322000011111 1111122222 2
Q ss_pred CCCCEEEEcCCCCCCCC---Cc---hhhhHHhhHHHHHHHHHH----HhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCC
Q 024248 113 TGMDIVIIPAGVPRKPG---MT---RDDLFNINAGIVKTLCEG----IAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGT 182 (270)
Q Consensus 113 ~~ADvVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg 182 (270)
...|++|.++|...... .+ ....+..|+.....+++. +.+. ..+.|+++|..... .+
T Consensus 85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~------------~~ 151 (260)
T PRK07063 85 GPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVER-GRGSIVNIASTHAF------------KI 151 (260)
T ss_pred CCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhh-CCeEEEEECChhhc------------cC
Confidence 46899999998642111 11 122345565554444444 4332 34566666543221 02
Q ss_pred CCCCCeeeechhhHHHHHHHHHHHhCCCCCccceEEEc
Q 024248 183 YDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (270)
Q Consensus 183 ~p~~kviG~t~ldt~r~~~~lA~~l~v~~~~v~~~V~G 220 (270)
.|..-.++.++..-..+-+.+++.+. +..|++..+-
T Consensus 152 ~~~~~~Y~~sKaa~~~~~~~la~el~--~~gIrvn~v~ 187 (260)
T PRK07063 152 IPGCFPYPVAKHGLLGLTRALGIEYA--ARNVRVNAIA 187 (260)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhC--ccCeEEEEEe
Confidence 23233355554444556777777764 3455554443
No 276
>PRK05650 short chain dehydrogenase; Provisional
Probab=97.59 E-value=0.0018 Score=57.36 Aligned_cols=35 Identities=31% Similarity=0.420 Sum_probs=31.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT 83 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~ 83 (270)
|+|.|+||+|.+|..++..|+.+|. +|++.+++..
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~--~V~~~~r~~~ 35 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGW--RLALADVNEE 35 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC--EEEEEeCCHH
Confidence 4799999999999999999999998 9999998753
No 277
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=97.59 E-value=0.00038 Score=61.14 Aligned_cols=71 Identities=23% Similarity=0.290 Sum_probs=46.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCC---HHHH-hCCCCEEEEcC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQ---LEDA-LTGMDIVIIPA 122 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d---~~~a-l~~ADvVIi~a 122 (270)
|+++|+|+ |.+|+++|..|...|+ +|+++|.+++.... -+.+......+ ....+| +++| +.++|++|.+.
T Consensus 1 m~iiIiG~-G~vG~~va~~L~~~g~--~Vv~Id~d~~~~~~-~~~~~~~~~~v--~gd~t~~~~L~~agi~~aD~vva~t 74 (225)
T COG0569 1 MKIIIIGA-GRVGRSVARELSEEGH--NVVLIDRDEERVEE-FLADELDTHVV--IGDATDEDVLEEAGIDDADAVVAAT 74 (225)
T ss_pred CEEEEECC-cHHHHHHHHHHHhCCC--ceEEEEcCHHHHHH-HhhhhcceEEE--EecCCCHHHHHhcCCCcCCEEEEee
Confidence 79999998 9999999999999999 99999998643211 01110000000 011122 4444 78999999986
Q ss_pred C
Q 024248 123 G 123 (270)
Q Consensus 123 g 123 (270)
|
T Consensus 75 ~ 75 (225)
T COG0569 75 G 75 (225)
T ss_pred C
Confidence 4
No 278
>PRK06949 short chain dehydrogenase; Provisional
Probab=97.58 E-value=0.0016 Score=56.96 Aligned_cols=36 Identities=22% Similarity=0.230 Sum_probs=32.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT 83 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~ 83 (270)
.++|.|+||+|.+|.+++..|+..|. +|++++++..
T Consensus 9 ~k~ilItGasg~IG~~~a~~l~~~G~--~Vi~~~r~~~ 44 (258)
T PRK06949 9 GKVALVTGASSGLGARFAQVLAQAGA--KVVLASRRVE 44 (258)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHH
Confidence 46899999999999999999999998 8999998753
No 279
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=97.58 E-value=0.0004 Score=63.26 Aligned_cols=64 Identities=20% Similarity=0.284 Sum_probs=48.5
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~a 122 (270)
+||+|||. |.+|..++..|+..|+ +|+++|+++.. ..++.... .....++.+++++||+||++.
T Consensus 2 ~~Ig~IGl-G~mG~~mA~~l~~~G~--~V~v~d~~~~~--~~~~~~~g-------~~~~~s~~~~~~~aDvVi~~v 65 (296)
T PRK15461 2 AAIAFIGL-GQMGSPMASNLLKQGH--QLQVFDVNPQA--VDALVDKG-------ATPAASPAQAAAGAEFVITML 65 (296)
T ss_pred CeEEEEee-CHHHHHHHHHHHHCCC--eEEEEcCCHHH--HHHHHHcC-------CcccCCHHHHHhcCCEEEEec
Confidence 38999997 9999999999999998 99999997543 22232211 112346778899999999986
No 280
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=97.57 E-value=0.0035 Score=55.72 Aligned_cols=36 Identities=17% Similarity=0.227 Sum_probs=32.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT 83 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~ 83 (270)
.+++.|+||+|.+|..++..|+..|. .|+++|++..
T Consensus 10 ~k~vlVtGas~giG~~ia~~l~~~G~--~V~~~~r~~~ 45 (278)
T PRK08277 10 GKVAVITGGGGVLGGAMAKELARAGA--KVAILDRNQE 45 (278)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHH
Confidence 45799999999999999999999998 9999998753
No 281
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=97.57 E-value=0.0018 Score=56.85 Aligned_cols=159 Identities=18% Similarity=0.186 Sum_probs=84.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCcce-e-eeeccCCHHH-------HhCC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAVV-R-GFLGQQQLED-------ALTG 114 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~~-~-~i~~t~d~~~-------al~~ 114 (270)
.++|.|+|++|.+|..++..|+..|. +|+++|++.... ...++.+....... . .+....+.++ .+..
T Consensus 11 ~k~vlVtG~s~gIG~~la~~l~~~G~--~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 88 (255)
T PRK06113 11 GKCAIITGAGAGIGKEIAITFATAGA--SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGK 88 (255)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 45899999999999999999999998 899999865321 12223221100000 0 0111111222 2345
Q ss_pred CCEEEEcCCCCCC--CCCch---hhhHHhhHHHHHHHHHHHhHh---CCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCC
Q 024248 115 MDIVIIPAGVPRK--PGMTR---DDLFNINAGIVKTLCEGIAKC---CPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPK 186 (270)
Q Consensus 115 ADvVIi~ag~~~~--~g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~ 186 (270)
.|++|+++|.... ...+. ...+..|+.....+++.+..+ ...+.++++|..... .+.+..
T Consensus 89 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~------------~~~~~~ 156 (255)
T PRK06113 89 VDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAE------------NKNINM 156 (255)
T ss_pred CCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEeccccc------------CCCCCc
Confidence 7999999985321 11122 223567776666666665432 233456656543221 022223
Q ss_pred CeeeechhhHHHHHHHHHHHhCCCCCccceEEEc
Q 024248 187 RLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (270)
Q Consensus 187 kviG~t~ldt~r~~~~lA~~l~v~~~~v~~~V~G 220 (270)
-.++.++.....+.+.++..+. +..|++.++.
T Consensus 157 ~~Y~~sK~a~~~~~~~la~~~~--~~~i~v~~v~ 188 (255)
T PRK06113 157 TSYASSKAAASHLVRNMAFDLG--EKNIRVNGIA 188 (255)
T ss_pred chhHHHHHHHHHHHHHHHHHhh--hhCeEEEEEe
Confidence 3455554444455666776653 4445554544
No 282
>PRK07478 short chain dehydrogenase; Provisional
Probab=97.57 E-value=0.0035 Score=54.90 Aligned_cols=148 Identities=16% Similarity=0.147 Sum_probs=81.3
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCccee--eeeccCCHHHH-------hCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAVVR--GFLGQQQLEDA-------LTGM 115 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~~~--~i~~t~d~~~a-------l~~A 115 (270)
+++.|+||+|.+|..++..|++.|. +|+++++++... ...++.......... .+....+.++. +...
T Consensus 7 k~~lItGas~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (254)
T PRK07478 7 KVAIITGASSGIGRAAAKLFAREGA--KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL 84 (254)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 4799999999999999999999998 999999875321 122332211100000 01111112222 2368
Q ss_pred CEEEEcCCCCCC--C--CCc---hhhhHHhhHH----HHHHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCCC
Q 024248 116 DIVIIPAGVPRK--P--GMT---RDDLFNINAG----IVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYD 184 (270)
Q Consensus 116 DvVIi~ag~~~~--~--g~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p 184 (270)
|++|.++|.... + ..+ ....+..|+. ..+.+.+.+.+. ..+.++++|..... ..+.|
T Consensus 85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~-~~~~iv~~sS~~~~-----------~~~~~ 152 (254)
T PRK07478 85 DIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLAR-GGGSLIFTSTFVGH-----------TAGFP 152 (254)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEEechHhh-----------ccCCC
Confidence 999999986321 1 111 2234566664 344455555443 33556655542210 01233
Q ss_pred CCCeeeechhhHHHHHHHHHHHhC
Q 024248 185 PKRLLGVTMLDVVRANTFVAEVLG 208 (270)
Q Consensus 185 ~~kviG~t~ldt~r~~~~lA~~l~ 208 (270)
..-.++.++.....+-+.+++.++
T Consensus 153 ~~~~Y~~sK~a~~~~~~~la~e~~ 176 (254)
T PRK07478 153 GMAAYAASKAGLIGLTQVLAAEYG 176 (254)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHh
Confidence 334466665555567777888775
No 283
>PRK06928 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.57 E-value=0.002 Score=58.22 Aligned_cols=98 Identities=17% Similarity=0.127 Sum_probs=62.3
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCc--cEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLV--SVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGV 124 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~--~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag~ 124 (270)
+||+|||+ |.+|..++..|...+.. .+|++++++... ....+... .... ..+.+.+++++++|+||++...
T Consensus 2 ~~I~iIG~-G~mG~ala~~L~~~g~~~~~~V~~~~r~~~~-~~~~l~~~--~~~~---~~~~~~~e~~~~aDvVilavpp 74 (277)
T PRK06928 2 EKIGFIGY-GSMADMIATKLLETEVATPEEIILYSSSKNE-HFNQLYDK--YPTV---ELADNEAEIFTKCDHSFICVPP 74 (277)
T ss_pred CEEEEECc-cHHHHHHHHHHHHCCCCCcccEEEEeCCcHH-HHHHHHHH--cCCe---EEeCCHHHHHhhCCEEEEecCH
Confidence 58999997 99999999999888721 389999986421 12222211 1111 1234666778999999998621
Q ss_pred CCCCCCchhhhHHhhHHHHHHHHHHHhHhC-CCCEEEEecCCCC
Q 024248 125 PRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVN 167 (270)
Q Consensus 125 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~sNPv~ 167 (270)
..+.++++.+..+. ++..++.+.+-++
T Consensus 75 ----------------~~~~~vl~~l~~~l~~~~~ivS~~aGi~ 102 (277)
T PRK06928 75 ----------------LAVLPLLKDCAPVLTPDRHVVSIAAGVS 102 (277)
T ss_pred ----------------HHHHHHHHHHHhhcCCCCEEEEECCCCC
Confidence 22345666665543 4556666677666
No 284
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=97.56 E-value=0.0022 Score=56.67 Aligned_cols=145 Identities=13% Similarity=0.120 Sum_probs=79.2
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCcceeee-eccCC---HHH-------HhC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAVVRGF-LGQQQ---LED-------ALT 113 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~~~~i-~~t~d---~~~-------al~ 113 (270)
+++.|+|++|.+|..++..|+.+|. +|++.+++.... ...++.... ..+..+ ...++ .++ .+.
T Consensus 11 k~~lItGa~~~iG~~ia~~l~~~G~--~vv~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 86 (265)
T PRK07097 11 KIALITGASYGIGFAIAKAYAKAGA--TIVFNDINQELVDKGLAAYRELG--IEAHGYVCDVTDEDGVQAMVSQIEKEVG 86 (265)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 4799999999999999999999998 899998875321 122222211 011100 00112 112 234
Q ss_pred CCCEEEEcCCCCCCC---CCc---hhhhHHhhHHHHH----HHHHHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCC
Q 024248 114 GMDIVIIPAGVPRKP---GMT---RDDLFNINAGIVK----TLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTY 183 (270)
Q Consensus 114 ~ADvVIi~ag~~~~~---g~~---r~~~~~~N~~i~~----~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~ 183 (270)
..|++|+++|..... ..+ ....+..|+.... .+.+.+.+ ...+.|++++..... .+.
T Consensus 87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~g~iv~isS~~~~------------~~~ 153 (265)
T PRK07097 87 VIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIK-KGHGKIINICSMMSE------------LGR 153 (265)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh-cCCcEEEEEcCcccc------------CCC
Confidence 579999999864211 111 1223445554433 34444433 245667777654331 023
Q ss_pred CCCCeeeechhhHHHHHHHHHHHhC
Q 024248 184 DPKRLLGVTMLDVVRANTFVAEVLG 208 (270)
Q Consensus 184 p~~kviG~t~ldt~r~~~~lA~~l~ 208 (270)
+....++.++..-..+.+.+++.++
T Consensus 154 ~~~~~Y~~sKaal~~l~~~la~e~~ 178 (265)
T PRK07097 154 ETVSAYAAAKGGLKMLTKNIASEYG 178 (265)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHhh
Confidence 3344566655444456777777764
No 285
>PRK12491 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.56 E-value=0.00055 Score=61.81 Aligned_cols=68 Identities=13% Similarity=0.152 Sum_probs=47.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCC--ccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPL--VSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~--~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~a 122 (270)
.|||++||+ |.+|++++..|++.|+ ..+|+.+|+++.. ...+.+.. .+. .+++.++.+++||+||++.
T Consensus 2 ~~~IgfIG~-G~MG~aia~~L~~~g~~~~~~I~v~~r~~~~--~~~l~~~~---g~~---~~~~~~e~~~~aDiIiLav 71 (272)
T PRK12491 2 NKQIGFIGC-GNMGIAMIGGMINKNIVSPDQIICSDLNVSN--LKNASDKY---GIT---ITTNNNEVANSADILILSI 71 (272)
T ss_pred CCeEEEECc-cHHHHHHHHHHHHCCCCCCceEEEECCCHHH--HHHHHHhc---CcE---EeCCcHHHHhhCCEEEEEe
Confidence 469999997 9999999999998875 3479999986432 22222210 011 1345567789999999986
No 286
>PRK08507 prephenate dehydrogenase; Validated
Probab=97.54 E-value=0.00074 Score=60.75 Aligned_cols=66 Identities=20% Similarity=0.295 Sum_probs=44.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~a 122 (270)
|||+|||. |.+|..++..|...|+..+|+.+|+++... ..+..... . ....+++++ .+||+||++.
T Consensus 1 m~I~iIG~-G~mG~sla~~l~~~g~~~~v~~~d~~~~~~--~~~~~~g~---~---~~~~~~~~~-~~aD~Vilav 66 (275)
T PRK08507 1 MKIGIIGL-GLMGGSLGLALKEKGLISKVYGYDHNELHL--KKALELGL---V---DEIVSFEEL-KKCDVIFLAI 66 (275)
T ss_pred CEEEEEcc-CHHHHHHHHHHHhcCCCCEEEEEcCCHHHH--HHHHHCCC---C---cccCCHHHH-hcCCEEEEeC
Confidence 68999997 999999999999888755889999875321 11111110 0 012245554 4699999996
No 287
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=97.53 E-value=0.00098 Score=63.55 Aligned_cols=103 Identities=23% Similarity=0.224 Sum_probs=62.2
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCc-cee-eeeccCCHHHHhCCCCEEEEcC
Q 024248 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNA-VVR-GFLGQQQLEDALTGMDIVIIPA 122 (270)
Q Consensus 45 ~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~-~~~-~i~~t~d~~~al~~ADvVIi~a 122 (270)
+.++|+|+||+|.+|..++..|+++|. +|+++++++... ...+....... .+. .+...+++++.+.+.|++|+.+
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~--~Vi~l~r~~~~l-~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnA 253 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGA--KVVALTSNSDKI-TLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINH 253 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHH-HHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECC
Confidence 345899999999999999999999998 999999865321 11111110000 010 0111123445678899999998
Q ss_pred CCCCCCCCc---hhhhHHhhHHHHHHHHHHH
Q 024248 123 GVPRKPGMT---RDDLFNINAGIVKTLCEGI 150 (270)
Q Consensus 123 g~~~~~g~~---r~~~~~~N~~i~~~i~~~i 150 (270)
|.......+ -.+.++.|......+++.+
T Consensus 254 Gi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~ 284 (406)
T PRK07424 254 GINVHGERTPEAINKSYEVNTFSAWRLMELF 284 (406)
T ss_pred CcCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 865322222 2345667776555555554
No 288
>PRK07832 short chain dehydrogenase; Provisional
Probab=97.53 E-value=0.0086 Score=53.16 Aligned_cols=147 Identities=16% Similarity=0.097 Sum_probs=78.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCc-c-ee-eeeccCCH-------HHHhCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNA-V-VR-GFLGQQQL-------EDALTG 114 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~-~-~~-~i~~t~d~-------~~al~~ 114 (270)
++++|+||+|.+|..++..|+..|. +|++++++.... ...++....... . +. .+....+. .+.+..
T Consensus 1 k~vlItGas~giG~~la~~la~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGA--ELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGS 78 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 4799999999999999999999998 899999875321 112222111100 0 00 01100111 122346
Q ss_pred CCEEEEcCCCCCCCC---Cc---hhhhHHhhHHHHHHHHHHHh----HhCCCCEEEEecCCCCCcHHHHHHHHHHhCCCC
Q 024248 115 MDIVIIPAGVPRKPG---MT---RDDLFNINAGIVKTLCEGIA----KCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYD 184 (270)
Q Consensus 115 ADvVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i~----~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p 184 (270)
.|+||+++|...... .+ -...+..|+.....+++.+. +....+.|+++|..... .+.|
T Consensus 79 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~------------~~~~ 146 (272)
T PRK07832 79 MDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGL------------VALP 146 (272)
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEcccccc------------CCCC
Confidence 899999998642111 11 12345666665555555543 22234566666644321 0223
Q ss_pred CCCeeeechhhHHHHHHHHHHHh
Q 024248 185 PKRLLGVTMLDVVRANTFVAEVL 207 (270)
Q Consensus 185 ~~kviG~t~ldt~r~~~~lA~~l 207 (270)
..-.++.++.....+.+.++..+
T Consensus 147 ~~~~Y~~sK~a~~~~~~~l~~e~ 169 (272)
T PRK07832 147 WHAAYSASKFGLRGLSEVLRFDL 169 (272)
T ss_pred CCcchHHHHHHHHHHHHHHHHHh
Confidence 23335554433334566666554
No 289
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.53 E-value=0.0018 Score=56.96 Aligned_cols=153 Identities=18% Similarity=0.129 Sum_probs=80.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHH-HhhccccCcceee----eeccCCHHHHh-------C
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTA-DISHMDTNAVVRG----FLGQQQLEDAL-------T 113 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~-dl~~~~~~~~~~~----i~~t~d~~~al-------~ 113 (270)
.++|.|+||+|.+|..++..|++.|. .|++++++....... .+.... ..+.. +....++++.+ .
T Consensus 15 ~k~vlItGas~gIG~~ia~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~g 90 (258)
T PRK06935 15 GKVAIVTGGNTGLGQGYAVALAKAGA--DIIITTHGTNWDETRRLIEKEG--RKVTFVQVDLTKPESAEKVVKEALEEFG 90 (258)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCcHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 35899999999999999999999998 999999873211111 121111 11111 11111222223 2
Q ss_pred CCCEEEEcCCCCCCC---CCc---hhhhHHhhHHHHHHHHHHHhHh---CCCCEEEEecCCCCCcHHHHHHHHHHhCCCC
Q 024248 114 GMDIVIIPAGVPRKP---GMT---RDDLFNINAGIVKTLCEGIAKC---CPKAIVNLISNPVNSTVPIAAEVFKKVGTYD 184 (270)
Q Consensus 114 ~ADvVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p 184 (270)
..|++|+++|..... ..+ ....+..|+.....+.+.+.++ ...+.++++|..... .+.+
T Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~------------~~~~ 158 (258)
T PRK06935 91 KIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSF------------QGGK 158 (258)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhc------------cCCC
Confidence 679999999864211 111 2233455655544444443332 123566666543221 0112
Q ss_pred CCCeeeechhhHHHHHHHHHHHhCCCCCccce
Q 024248 185 PKRLLGVTMLDVVRANTFVAEVLGLDPREVDV 216 (270)
Q Consensus 185 ~~kviG~t~ldt~r~~~~lA~~l~v~~~~v~~ 216 (270)
..-.++.++.....+-+.++++++ +..+++
T Consensus 159 ~~~~Y~asK~a~~~~~~~la~e~~--~~gi~v 188 (258)
T PRK06935 159 FVPAYTASKHGVAGLTKAFANELA--AYNIQV 188 (258)
T ss_pred CchhhHHHHHHHHHHHHHHHHHhh--hhCeEE
Confidence 122345554444557777888775 334443
No 290
>PRK09072 short chain dehydrogenase; Provisional
Probab=97.53 E-value=0.0022 Score=56.52 Aligned_cols=114 Identities=23% Similarity=0.237 Sum_probs=65.6
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCcceeeee-ccCCH---HHH------hC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAVVRGFL-GQQQL---EDA------LT 113 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~~~~i~-~t~d~---~~a------l~ 113 (270)
.++|.|+||+|.+|..++..|+.+|. +|++++++.... ...++... ..+..+. .-.|. ++. +.
T Consensus 5 ~~~vlItG~s~~iG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~~~~ 79 (263)
T PRK09072 5 DKRVLLTGASGGIGQALAEALAAAGA--RLLLVGRNAEKLEALAARLPYP---GRHRWVVADLTSEAGREAVLARAREMG 79 (263)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHhcC---CceEEEEccCCCHHHHHHHHHHHHhcC
Confidence 45799999999999999999999998 999999875321 11122111 1111110 01121 111 34
Q ss_pred CCCEEEEcCCCCCCCC---Cc---hhhhHHhhHHHHHHHHHHHhHh---CCCCEEEEecC
Q 024248 114 GMDIVIIPAGVPRKPG---MT---RDDLFNINAGIVKTLCEGIAKC---CPKAIVNLISN 164 (270)
Q Consensus 114 ~ADvVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~sN 164 (270)
..|+||+++|...... .+ -.+.+..|+.....+++.+.++ .+.+.+++++.
T Consensus 80 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS 139 (263)
T PRK09072 80 GINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGS 139 (263)
T ss_pred CCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecC
Confidence 6899999998643211 11 1234567776666666665442 22355665554
No 291
>PRK06198 short chain dehydrogenase; Provisional
Probab=97.53 E-value=0.004 Score=54.59 Aligned_cols=147 Identities=14% Similarity=0.101 Sum_probs=77.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccE-EEEEeCCCChh--HHHHhhccccCcceeee-eccCC---HHHH-------
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSV-LHLYDVVNTPG--VTADISHMDTNAVVRGF-LGQQQ---LEDA------- 111 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~e-V~LvD~~~~~~--~~~dl~~~~~~~~~~~i-~~t~d---~~~a------- 111 (270)
.++|.|+|++|.+|..++..|+..|. + |++++++.... ...++.... ..+..+ ..-++ +++.
T Consensus 6 ~k~vlItGa~g~iG~~la~~l~~~G~--~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (260)
T PRK06198 6 GKVALVTGGTQGLGAAIARAFAERGA--AGLVICGRNAEKGEAQAAELEALG--AKAVFVQADLSDVEDCRRVVAAADEA 81 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCC--CeEEEEcCCHHHHHHHHHHHHhcC--CeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 35799999999999999999999987 6 99999875321 111221111 111100 01112 2222
Q ss_pred hCCCCEEEEcCCCCCCCC---Cch---hhhHHhhHHHHHHHHHHH----hHhCCCCEEEEecCCCCCcHHHHHHHHHHhC
Q 024248 112 LTGMDIVIIPAGVPRKPG---MTR---DDLFNINAGIVKTLCEGI----AKCCPKAIVNLISNPVNSTVPIAAEVFKKVG 181 (270)
Q Consensus 112 l~~ADvVIi~ag~~~~~g---~~r---~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~sNPv~~~~~i~t~~~~~~s 181 (270)
+.+.|++|+++|...... .+. ...+..|+.....+++.+ .+....+.++++|..... .
T Consensus 82 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~------------~ 149 (260)
T PRK06198 82 FGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAH------------G 149 (260)
T ss_pred hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccc------------c
Confidence 236899999998653211 111 223456665555544444 333223556666532221 0
Q ss_pred CCCCCCeeeechhhHHHHHHHHHHHhC
Q 024248 182 TYDPKRLLGVTMLDVVRANTFVAEVLG 208 (270)
Q Consensus 182 g~p~~kviG~t~ldt~r~~~~lA~~l~ 208 (270)
+.+..-.++.++.....+-+.++..+.
T Consensus 150 ~~~~~~~Y~~sK~a~~~~~~~~a~e~~ 176 (260)
T PRK06198 150 GQPFLAAYCASKGALATLTRNAAYALL 176 (260)
T ss_pred CCCCcchhHHHHHHHHHHHHHHHHHhc
Confidence 222223455544333445566666654
No 292
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.53 E-value=0.0033 Score=55.19 Aligned_cols=158 Identities=12% Similarity=0.124 Sum_probs=82.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHH-------hCCCCEE
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDA-------LTGMDIV 118 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~a-------l~~ADvV 118 (270)
.+++.|+||+|.+|..++..|++.|. +|++.+..... ...++.+.......-.+....+++++ +...|+|
T Consensus 7 ~k~~lItGas~gIG~~~a~~l~~~G~--~v~~~~~~~~~-~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l 83 (255)
T PRK06463 7 GKVALITGGTRGIGRAIAEAFLREGA--KVAVLYNSAEN-EAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVL 83 (255)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCcHH-HHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 35899999999999999999999998 88888764321 11122211000000001111122222 3467999
Q ss_pred EEcCCCCCCC---CCc---hhhhHHhhHHH----HHHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCe
Q 024248 119 IIPAGVPRKP---GMT---RDDLFNINAGI----VKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRL 188 (270)
Q Consensus 119 Ii~ag~~~~~---g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kv 188 (270)
|+++|..... ..+ ....+..|+.. .+.+++.+++. ..+.|+++|..... ....+..-.
T Consensus 84 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-~~g~iv~isS~~~~-----------~~~~~~~~~ 151 (255)
T PRK06463 84 VNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLS-KNGAIVNIASNAGI-----------GTAAEGTTF 151 (255)
T ss_pred EECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcCHHhC-----------CCCCCCccH
Confidence 9999874311 111 12335566655 46666666543 34566666532210 000112233
Q ss_pred eeechhhHHHHHHHHHHHhCCCCCccceEEEc
Q 024248 189 LGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (270)
Q Consensus 189 iG~t~ldt~r~~~~lA~~l~v~~~~v~~~V~G 220 (270)
++.++.....+-+.++..++ +..+++.++.
T Consensus 152 Y~asKaa~~~~~~~la~e~~--~~~i~v~~i~ 181 (255)
T PRK06463 152 YAITKAGIIILTRRLAFELG--KYGIRVNAVA 181 (255)
T ss_pred hHHHHHHHHHHHHHHHHHhh--hcCeEEEEEe
Confidence 55555444556677777654 3445554444
No 293
>PRK07109 short chain dehydrogenase; Provisional
Probab=97.52 E-value=0.0025 Score=58.88 Aligned_cols=35 Identities=20% Similarity=0.207 Sum_probs=31.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT 83 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~ 83 (270)
++|+|+||+|.+|..++..|+.+|. +|+++++++.
T Consensus 9 k~vlITGas~gIG~~la~~la~~G~--~Vvl~~R~~~ 43 (334)
T PRK07109 9 QVVVITGASAGVGRATARAFARRGA--KVVLLARGEE 43 (334)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC--EEEEEECCHH
Confidence 4799999999999999999999998 9999998753
No 294
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=97.52 E-value=0.0015 Score=59.74 Aligned_cols=117 Identities=15% Similarity=0.156 Sum_probs=68.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHH--H--h--hccccCcceeeeeccCCHHHHhCCCCEEE
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTA--D--I--SHMDTNAVVRGFLGQQQLEDALTGMDIVI 119 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~--d--l--~~~~~~~~~~~i~~t~d~~~al~~ADvVI 119 (270)
+|||+|+|+ |-||+.++..|...|. +|+++++......+. + + ........+. .... +. +.....|+||
T Consensus 2 ~m~I~IiGa-GaiG~~~a~~L~~~G~--~V~lv~r~~~~~~~i~~~~Gl~i~~~g~~~~~~-~~~~-~~-~~~~~~D~vi 75 (305)
T PRK05708 2 SMTWHILGA-GSLGSLWACRLARAGL--PVRLILRDRQRLAAYQQAGGLTLVEQGQASLYA-IPAE-TA-DAAEPIHRLL 75 (305)
T ss_pred CceEEEECC-CHHHHHHHHHHHhCCC--CeEEEEechHHHHHHhhcCCeEEeeCCcceeec-cCCC-Cc-ccccccCEEE
Confidence 689999998 9999999999999998 999999964211110 0 1 0000000011 1111 11 2346789999
Q ss_pred EcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHh-CCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeeee
Q 024248 120 IPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKC-CPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV 191 (270)
Q Consensus 120 i~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG~ 191 (270)
++.-.. + ..+.++.+... .+++.++.+-|-++. -+.+.+. ||.+++++.
T Consensus 76 v~vK~~--------~--------~~~al~~l~~~l~~~t~vv~lQNGv~~-----~e~l~~~--~~~~~v~~g 125 (305)
T PRK05708 76 LACKAY--------D--------AEPAVASLAHRLAPGAELLLLQNGLGS-----QDAVAAR--VPHARCIFA 125 (305)
T ss_pred EECCHH--------h--------HHHHHHHHHhhCCCCCEEEEEeCCCCC-----HHHHHHh--CCCCcEEEE
Confidence 996221 1 13344455544 378888888898873 2233333 666777654
No 295
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.52 E-value=0.0034 Score=54.64 Aligned_cols=148 Identities=14% Similarity=0.115 Sum_probs=77.9
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCCh---hHHHHhhccccCccee--eeeccCC-------HHHHhCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP---GVTADISHMDTNAVVR--GFLGQQQ-------LEDALTG 114 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~---~~~~dl~~~~~~~~~~--~i~~t~d-------~~~al~~ 114 (270)
.+|.|+||+|++|++++..|+.+|. +|++....... ....++.......... .+....+ +.+.+..
T Consensus 7 ~~vlitGasg~iG~~l~~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (252)
T PRK06077 7 KVVVVTGSGRGIGRAIAVRLAKEGS--LVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGV 84 (252)
T ss_pred cEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCC
Confidence 4899999999999999999999998 87776543211 1111111110000000 0111111 1122346
Q ss_pred CCEEEEcCCCCCCCC---Cch---hhhHHhhHHHHHHHHHHHhHhC-CCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCC
Q 024248 115 MDIVIIPAGVPRKPG---MTR---DDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKR 187 (270)
Q Consensus 115 ADvVIi~ag~~~~~g---~~r---~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~k 187 (270)
.|+||+++|...... .+. .+.+..|+.....+++.+.++- ..+.++++|.-.. ..+++..-
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~------------~~~~~~~~ 152 (252)
T PRK06077 85 ADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAG------------IRPAYGLS 152 (252)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhc------------cCCCCCch
Confidence 899999998632111 111 2334556555555555554432 2356666553221 01344444
Q ss_pred eeeechhhHHHHHHHHHHHhC
Q 024248 188 LLGVTMLDVVRANTFVAEVLG 208 (270)
Q Consensus 188 viG~t~ldt~r~~~~lA~~l~ 208 (270)
.++.++.....+...++++++
T Consensus 153 ~Y~~sK~~~~~~~~~l~~~~~ 173 (252)
T PRK06077 153 IYGAMKAAVINLTKYLALELA 173 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 566655555566677778764
No 296
>PRK08628 short chain dehydrogenase; Provisional
Probab=97.51 E-value=0.0037 Score=54.84 Aligned_cols=115 Identities=17% Similarity=0.164 Sum_probs=64.4
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhH-HHHhhccccCccee--eeeccCCHHHHh-------CCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV-TADISHMDTNAVVR--GFLGQQQLEDAL-------TGMD 116 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~-~~dl~~~~~~~~~~--~i~~t~d~~~al-------~~AD 116 (270)
.+|.|+||+|.+|..++..|+++|. +|+++++++.... ..++.......... .+....++++++ ...|
T Consensus 8 ~~ilItGasggiG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 85 (258)
T PRK08628 8 KVVIVTGGASGIGAAISLRLAEEGA--IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRID 85 (258)
T ss_pred CEEEEeCCCChHHHHHHHHHHHcCC--cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence 4799999999999999999999998 8999988764221 22332211100000 011111222223 3579
Q ss_pred EEEEcCCCCCCCCC-----chhhhHHhhHHHHHHHHHHHhHhC--CCCEEEEec
Q 024248 117 IVIIPAGVPRKPGM-----TRDDLFNINAGIVKTLCEGIAKCC--PKAIVNLIS 163 (270)
Q Consensus 117 vVIi~ag~~~~~g~-----~r~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~s 163 (270)
+||+++|....... +-.+.+..|+.....+.+.+.++. ..+.++++|
T Consensus 86 ~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~s 139 (258)
T PRK08628 86 GLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNIS 139 (258)
T ss_pred EEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEEC
Confidence 99999986422111 122345666665555555554322 234555554
No 297
>PRK08818 prephenate dehydrogenase; Provisional
Probab=97.50 E-value=0.00096 Score=62.83 Aligned_cols=55 Identities=25% Similarity=0.317 Sum_probs=44.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhC-CCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~-g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~a 122 (270)
.+||+|||.+|.+|..++..|.+. ++ +|+.+|+. +. ...+.++.+++||+||+++
T Consensus 4 ~~~I~IIGl~GliGgslA~alk~~~~~--~V~g~D~~----------d~----------~~~~~~~~v~~aDlVilav 59 (370)
T PRK08818 4 QPVVGIVGSAGAYGRWLARFLRTRMQL--EVIGHDPA----------DP----------GSLDPATLLQRADVLIFSA 59 (370)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCC--EEEEEcCC----------cc----------ccCCHHHHhcCCCEEEEeC
Confidence 459999998899999999999875 55 99999973 11 1235667899999999996
No 298
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=97.50 E-value=0.002 Score=56.88 Aligned_cols=156 Identities=15% Similarity=0.095 Sum_probs=82.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHH--HHhhccccCccee-eeeccCCHHHH-------hCCC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVT--ADISHMDTNAVVR-GFLGQQQLEDA-------LTGM 115 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~--~dl~~~~~~~~~~-~i~~t~d~~~a-------l~~A 115 (270)
.+++.|+||+|.+|..++..|+..|. +|+++|+++..... .++... . ..+. .+....+.+++ +...
T Consensus 6 ~k~vlVtGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~-~-~~~~~D~~~~~~~~~~~~~~~~~~g~i 81 (263)
T PRK06200 6 GQVALITGGGSGIGRALVERFLAEGA--RVAVLERSAEKLASLRQRFGDH-V-LVVEGDVTSYADNQRAVDQTVDAFGKL 81 (263)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhCCc-c-eEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 45899999999999999999999998 99999987532211 111100 0 0000 01111112222 3468
Q ss_pred CEEEEcCCCCCCC----CCch-------hhhHHhhHHHHHHHHHHHhHhC--CCCEEEEecCCCCCcHHHHHHHHHHhCC
Q 024248 116 DIVIIPAGVPRKP----GMTR-------DDLFNINAGIVKTLCEGIAKCC--PKAIVNLISNPVNSTVPIAAEVFKKVGT 182 (270)
Q Consensus 116 DvVIi~ag~~~~~----g~~r-------~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~sNPv~~~~~i~t~~~~~~sg 182 (270)
|++|.++|..... ..+. ...+..|+.....+++.+.+.. ..+.+++++.-... .+
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~------------~~ 149 (263)
T PRK06200 82 DCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSF------------YP 149 (263)
T ss_pred CEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhc------------CC
Confidence 9999999864211 1111 1223455554444444443221 23555555432110 01
Q ss_pred CCCCCeeeechhhHHHHHHHHHHHhCCCCCccceEEEc
Q 024248 183 YDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (270)
Q Consensus 183 ~p~~kviG~t~ldt~r~~~~lA~~l~v~~~~v~~~V~G 220 (270)
.+..-.++.++-....+-+.+|..++- . |++..+-
T Consensus 150 ~~~~~~Y~~sK~a~~~~~~~la~el~~--~-Irvn~i~ 184 (263)
T PRK06200 150 GGGGPLYTASKHAVVGLVRQLAYELAP--K-IRVNGVA 184 (263)
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHhc--C-cEEEEEe
Confidence 222334666655555677888888753 2 6554443
No 299
>PRK08177 short chain dehydrogenase; Provisional
Probab=97.49 E-value=0.0026 Score=54.84 Aligned_cols=158 Identities=14% Similarity=0.130 Sum_probs=80.5
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhH-HHHhhccccCcceeeeeccCCHHHH---h--CCCCEEEEc
Q 024248 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV-TADISHMDTNAVVRGFLGQQQLEDA---L--TGMDIVIIP 121 (270)
Q Consensus 48 KI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~-~~dl~~~~~~~~~~~i~~t~d~~~a---l--~~ADvVIi~ 121 (270)
++.|+|++|.+|..++..|+..|. +|+++|++..... ..++... ....-.+....++++. + ...|+||++
T Consensus 3 ~vlItG~sg~iG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~--~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ 78 (225)
T PRK08177 3 TALIIGASRGLGLGLVDRLLERGW--QVTATVRGPQQDTALQALPGV--HIEKLDMNDPASLDQLLQRLQGQRFDLLFVN 78 (225)
T ss_pred EEEEeCCCchHHHHHHHHHHhCCC--EEEEEeCCCcchHHHHhcccc--ceEEcCCCCHHHHHHHHHHhhcCCCCEEEEc
Confidence 699999999999999999999998 9999999764221 1111111 0000001111112222 2 258999999
Q ss_pred CCCCCCCC-----Cch---hhhHHhhHHHHHHHHHHHhHhCC-C-CEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeeee
Q 024248 122 AGVPRKPG-----MTR---DDLFNINAGIVKTLCEGIAKCCP-K-AIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV 191 (270)
Q Consensus 122 ag~~~~~g-----~~r---~~~~~~N~~i~~~i~~~i~~~~p-~-a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG~ 191 (270)
+|...... .+. ...+..|+.....+.+.+..+.. . +.+++.+..... . .....+....++.
T Consensus 79 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~----~-----~~~~~~~~~~Y~~ 149 (225)
T PRK08177 79 AGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGS----V-----ELPDGGEMPLYKA 149 (225)
T ss_pred CcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccc----c-----ccCCCCCccchHH
Confidence 98642111 111 12233444444444444443321 2 444444432221 0 0000011123566
Q ss_pred chhhHHHHHHHHHHHhCCCCCccceEEEc
Q 024248 192 TMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (270)
Q Consensus 192 t~ldt~r~~~~lA~~l~v~~~~v~~~V~G 220 (270)
++.....+-+.++++++- ..+++.++.
T Consensus 150 sK~a~~~~~~~l~~e~~~--~~i~v~~i~ 176 (225)
T PRK08177 150 SKAALNSMTRSFVAELGE--PTLTVLSMH 176 (225)
T ss_pred HHHHHHHHHHHHHHHhhc--CCeEEEEEc
Confidence 655566677888887653 345544444
No 300
>PRK12747 short chain dehydrogenase; Provisional
Probab=97.49 E-value=0.0059 Score=53.40 Aligned_cols=149 Identities=19% Similarity=0.160 Sum_probs=80.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCC-Ch--hHHHHhhccccCcc-ee-eeeccCC-------HHHHh-
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TP--GVTADISHMDTNAV-VR-GFLGQQQ-------LEDAL- 112 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~-~~--~~~~dl~~~~~~~~-~~-~i~~t~d-------~~~al- 112 (270)
.+++.|+||+|.+|.+++..|+..|. +|++.+... .. ....++........ +. .+....+ ..+.+
T Consensus 4 ~k~~lItGas~gIG~~ia~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (252)
T PRK12747 4 GKVALVTGASRGIGRAIAKRLANDGA--LVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ 81 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC--eEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence 35799999999999999999999998 888875432 21 11222221100000 00 0000001 11111
Q ss_pred -----CCCCEEEEcCCCCCCC---CCc---hhhhHHhhHHHHHHHHHHHhHhC-CCCEEEEecCCCCCcHHHHHHHHHHh
Q 024248 113 -----TGMDIVIIPAGVPRKP---GMT---RDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKV 180 (270)
Q Consensus 113 -----~~ADvVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~sNPv~~~~~i~t~~~~~~ 180 (270)
...|++|.++|..... ..+ ....+..|+.....+++.+.+.. ..+.|+++|.....
T Consensus 82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~------------ 149 (252)
T PRK12747 82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATR------------ 149 (252)
T ss_pred hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccc------------
Confidence 2689999999864211 111 12345577666665555554432 34667666643321
Q ss_pred CCCCCCCeeeechhhHHHHHHHHHHHhC
Q 024248 181 GTYDPKRLLGVTMLDVVRANTFVAEVLG 208 (270)
Q Consensus 181 sg~p~~kviG~t~ldt~r~~~~lA~~l~ 208 (270)
.+.|..-.++.++.....+-+.++..++
T Consensus 150 ~~~~~~~~Y~~sKaa~~~~~~~la~e~~ 177 (252)
T PRK12747 150 ISLPDFIAYSMTKGAINTMTFTLAKQLG 177 (252)
T ss_pred cCCCCchhHHHHHHHHHHHHHHHHHHHh
Confidence 0223333466666666667777888775
No 301
>PRK08589 short chain dehydrogenase; Validated
Probab=97.49 E-value=0.0032 Score=56.06 Aligned_cols=155 Identities=16% Similarity=0.148 Sum_probs=81.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC-hhHHHHhhccccCcc-ee-eeeccCCHHH-------HhCCC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTNAV-VR-GFLGQQQLED-------ALTGM 115 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~-~~~~~dl~~~~~~~~-~~-~i~~t~d~~~-------al~~A 115 (270)
.+++.|+||+|.+|..++..|+.+|. +|+++++++. .....++.+...... +. .+....+.++ .+...
T Consensus 6 ~k~vlItGas~gIG~aia~~l~~~G~--~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 83 (272)
T PRK08589 6 NKVAVITGASTGIGQASAIALAQEGA--YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV 83 (272)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 34799999999999999999999998 9999999731 111223322110000 00 0111111222 22357
Q ss_pred CEEEEcCCCCCCCC----Cch---hhhHHhhHHHH----HHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCCC
Q 024248 116 DIVIIPAGVPRKPG----MTR---DDLFNINAGIV----KTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYD 184 (270)
Q Consensus 116 DvVIi~ag~~~~~g----~~r---~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p 184 (270)
|++|.++|.....+ .+. ...+..|+... +.+.+.+.+. .+.|+++|..... .+.+
T Consensus 84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~------------~~~~ 149 (272)
T PRK08589 84 DVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQ--GGSIINTSSFSGQ------------AADL 149 (272)
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEeCchhhc------------CCCC
Confidence 99999998643211 111 12334555443 4444544432 3667766643321 0122
Q ss_pred CCCeeeechhhHHHHHHHHHHHhCCCCCccceEE
Q 024248 185 PKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPV 218 (270)
Q Consensus 185 ~~kviG~t~ldt~r~~~~lA~~l~v~~~~v~~~V 218 (270)
..-.++.++..-..+.+.+|+.++- ..|++.+
T Consensus 150 ~~~~Y~asKaal~~l~~~la~e~~~--~gI~v~~ 181 (272)
T PRK08589 150 YRSGYNAAKGAVINFTKSIAIEYGR--DGIRANA 181 (272)
T ss_pred CCchHHHHHHHHHHHHHHHHHHhhh--cCeEEEE
Confidence 2223455544445677778877643 3444433
No 302
>PRK09134 short chain dehydrogenase; Provisional
Probab=97.49 E-value=0.0028 Score=55.72 Aligned_cols=157 Identities=15% Similarity=0.139 Sum_probs=83.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC-hh--HHHHhhccccCcceeeee-ccCC---HHHHh------
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PG--VTADISHMDTNAVVRGFL-GQQQ---LEDAL------ 112 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~-~~--~~~dl~~~~~~~~~~~i~-~t~d---~~~al------ 112 (270)
.+++.|+||+|++|.+++..|++.|. .|++++.... .. ....+.... ..+..+. ..+| +++++
T Consensus 9 ~k~vlItGas~giG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~~~~~ 84 (258)
T PRK09134 9 PRAALVTGAARRIGRAIALDLAAHGF--DVAVHYNRSRDEAEALAAEIRALG--RRAVALQADLADEAEVRALVARASAA 84 (258)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 45899999999999999999999998 8888776432 11 111222111 1111110 1112 22222
Q ss_pred -CCCCEEEEcCCCCCCC---CCc---hhhhHHhhHHHHHHHHHHHhHhCC---CCEEEEecCCCCCcHHHHHHHHHHhCC
Q 024248 113 -TGMDIVIIPAGVPRKP---GMT---RDDLFNINAGIVKTLCEGIAKCCP---KAIVNLISNPVNSTVPIAAEVFKKVGT 182 (270)
Q Consensus 113 -~~ADvVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~~p---~a~viv~sNPv~~~~~i~t~~~~~~sg 182 (270)
...|+||+++|..... ..+ ....+..|+.....+++.+.++.+ .+.+++++.... +. .
T Consensus 85 ~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~----------~~--~ 152 (258)
T PRK09134 85 LGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRV----------WN--L 152 (258)
T ss_pred cCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhh----------cC--C
Confidence 3479999999864221 111 233567787766667766655432 345554432111 00 0
Q ss_pred CCCCCeeeechhhHHHHHHHHHHHhCCCCCccceEEEcc
Q 024248 183 YDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGG 221 (270)
Q Consensus 183 ~p~~kviG~t~ldt~r~~~~lA~~l~v~~~~v~~~V~G~ 221 (270)
.|....++.++.....+-+.+++.++- . +++.++..
T Consensus 153 ~p~~~~Y~~sK~a~~~~~~~la~~~~~--~-i~v~~i~P 188 (258)
T PRK09134 153 NPDFLSYTLSKAALWTATRTLAQALAP--R-IRVNAIGP 188 (258)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhcC--C-cEEEEeec
Confidence 121123555555555566777777642 2 65555543
No 303
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=97.49 E-value=0.0026 Score=55.52 Aligned_cols=33 Identities=24% Similarity=0.352 Sum_probs=30.5
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCC
Q 024248 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (270)
Q Consensus 48 KI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~ 82 (270)
++.|+|++|.+|..++..|++.|. +|++++++.
T Consensus 2 ~~lItG~sg~iG~~la~~l~~~G~--~v~~~~r~~ 34 (254)
T TIGR02415 2 VALVTGGAQGIGKGIAERLAKDGF--AVAVADLNE 34 (254)
T ss_pred EEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 689999999999999999999998 999999874
No 304
>PRK05855 short chain dehydrogenase; Validated
Probab=97.49 E-value=0.0031 Score=61.58 Aligned_cols=160 Identities=16% Similarity=0.148 Sum_probs=85.2
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCccee--eeeccCCHHHH-------h
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAVVR--GFLGQQQLEDA-------L 112 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~~~--~i~~t~d~~~a-------l 112 (270)
.+.+++.|+||+|.+|..++..|+.+|. +|++++++.... ...++.......... .+......++. +
T Consensus 313 ~~~~~~lv~G~s~giG~~~a~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 390 (582)
T PRK05855 313 FSGKLVVVTGAGSGIGRETALAFAREGA--EVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEH 390 (582)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 4456899999999999999999999999 899999975321 112222111000000 01101111121 2
Q ss_pred CCCCEEEEcCCCCCCCC---Cc---hhhhHHhhHHHHHHHH----HHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCC
Q 024248 113 TGMDIVIIPAGVPRKPG---MT---RDDLFNINAGIVKTLC----EGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGT 182 (270)
Q Consensus 113 ~~ADvVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~----~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg 182 (270)
...|++|.+||...... .+ -...+..|+.....++ +.+.+....+.|+++|.-... .+
T Consensus 391 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~------------~~ 458 (582)
T PRK05855 391 GVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAY------------AP 458 (582)
T ss_pred CCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhc------------cC
Confidence 35799999998753211 11 1233556765554444 444444445667766643221 02
Q ss_pred CCCCCeeeechhhHHHHHHHHHHHhCCCCCccceEEE
Q 024248 183 YDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVV 219 (270)
Q Consensus 183 ~p~~kviG~t~ldt~r~~~~lA~~l~v~~~~v~~~V~ 219 (270)
.+..-.++.++.....+...++.++. +..|++.++
T Consensus 459 ~~~~~~Y~~sKaa~~~~~~~l~~e~~--~~gi~v~~v 493 (582)
T PRK05855 459 SRSLPAYATSKAAVLMLSECLRAELA--AAGIGVTAI 493 (582)
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhc--ccCcEEEEE
Confidence 23333455554444456666666654 334544333
No 305
>PTZ00142 6-phosphogluconate dehydrogenase; Provisional
Probab=97.49 E-value=0.00088 Score=65.05 Aligned_cols=100 Identities=16% Similarity=0.170 Sum_probs=63.3
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhC---CCCEEEEcCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALT---GMDIVIIPAG 123 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~---~ADvVIi~ag 123 (270)
++|+|||. |.+|+++|..|+.+|+ +|+++|+++.. ..++.......... +..+.+++++++ ++|+||+++-
T Consensus 2 ~~IgvIGL-G~MG~~lA~nL~~~G~--~V~v~dr~~~~--~~~l~~~~~~~g~~-i~~~~s~~e~v~~l~~~d~Iil~v~ 75 (470)
T PTZ00142 2 SDIGLIGL-AVMGQNLALNIASRGF--KISVYNRTYEK--TEEFVKKAKEGNTR-VKGYHTLEELVNSLKKPRKVILLIK 75 (470)
T ss_pred CEEEEEeE-hHHHHHHHHHHHHCCC--eEEEEeCCHHH--HHHHHHhhhhcCCc-ceecCCHHHHHhcCCCCCEEEEEeC
Confidence 38999997 9999999999999999 99999997543 22222210000100 123457777775 5898888752
Q ss_pred CCCCCCCchhhhHHhhHHHHHHHHHHHhHh-CCCCEEEEecCCCC
Q 024248 124 VPRKPGMTRDDLFNINAGIVKTLCEGIAKC-CPKAIVNLISNPVN 167 (270)
Q Consensus 124 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~sNPv~ 167 (270)
.+ +.+.++++.+..+ .++.++|..||-..
T Consensus 76 ~~---------------~~v~~vi~~l~~~L~~g~iIID~gn~~~ 105 (470)
T PTZ00142 76 AG---------------EAVDETIDNLLPLLEKGDIIIDGGNEWY 105 (470)
T ss_pred Ch---------------HHHHHHHHHHHhhCCCCCEEEECCCCCH
Confidence 11 2234444455443 36778888887543
No 306
>PRK07035 short chain dehydrogenase; Provisional
Probab=97.48 E-value=0.0024 Score=55.79 Aligned_cols=148 Identities=14% Similarity=0.070 Sum_probs=77.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCCh--hHHHHhhccccCcc-ee-eeeccCCHHHH-------hCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTNAV-VR-GFLGQQQLEDA-------LTGM 115 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~--~~~~dl~~~~~~~~-~~-~i~~t~d~~~a-------l~~A 115 (270)
++|.|+||+|.+|..++..|+..|. .|+++|++... ....++........ +. .+....+.+++ +...
T Consensus 9 k~vlItGas~gIG~~l~~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 86 (252)
T PRK07035 9 KIALVTGASRGIGEAIAKLLAQQGA--HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL 86 (252)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4799999999999999999999998 99999987432 11222322110000 10 01111112222 2358
Q ss_pred CEEEEcCCCCCC--C--CCc---hhhhHHhhHHHHHHHHHHHhHh---CCCCEEEEecCCCCCcHHHHHHHHHHhCCCCC
Q 024248 116 DIVIIPAGVPRK--P--GMT---RDDLFNINAGIVKTLCEGIAKC---CPKAIVNLISNPVNSTVPIAAEVFKKVGTYDP 185 (270)
Q Consensus 116 DvVIi~ag~~~~--~--g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~ 185 (270)
|++|+++|.... + ..+ ....+..|+.....+.+.+.++ .....++++|..... .+.+.
T Consensus 87 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~------------~~~~~ 154 (252)
T PRK07035 87 DILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGV------------SPGDF 154 (252)
T ss_pred CEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhc------------CCCCC
Confidence 999999874211 1 111 1234556666655555444332 233566666532210 01222
Q ss_pred CCeeeechhhHHHHHHHHHHHhC
Q 024248 186 KRLLGVTMLDVVRANTFVAEVLG 208 (270)
Q Consensus 186 ~kviG~t~ldt~r~~~~lA~~l~ 208 (270)
.-.++.++.....+.+.+++.++
T Consensus 155 ~~~Y~~sK~al~~~~~~l~~e~~ 177 (252)
T PRK07035 155 QGIYSITKAAVISMTKAFAKECA 177 (252)
T ss_pred CcchHHHHHHHHHHHHHHHHHHh
Confidence 23355544444456666777764
No 307
>PRK09291 short chain dehydrogenase; Provisional
Probab=97.48 E-value=0.0029 Score=55.26 Aligned_cols=77 Identities=13% Similarity=0.130 Sum_probs=48.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh-HHHHh-hccccCccee--eeeccCCHHHHhC-CCCEEEEc
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG-VTADI-SHMDTNAVVR--GFLGQQQLEDALT-GMDIVIIP 121 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~-~~~dl-~~~~~~~~~~--~i~~t~d~~~al~-~ADvVIi~ 121 (270)
++|.|+||+|.+|..++..|++.|. +|++.+++.... ...+. ........+. .+....+++.++. +.|+||++
T Consensus 3 ~~vlVtGasg~iG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~ 80 (257)
T PRK09291 3 KTILITGAGSGFGREVALRLARKGH--NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNN 80 (257)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEEC
Confidence 3799999999999999999999998 999998864321 11111 1110000110 1111123444454 89999999
Q ss_pred CCCC
Q 024248 122 AGVP 125 (270)
Q Consensus 122 ag~~ 125 (270)
+|..
T Consensus 81 ag~~ 84 (257)
T PRK09291 81 AGIG 84 (257)
T ss_pred CCcC
Confidence 9865
No 308
>PRK13243 glyoxylate reductase; Reviewed
Probab=97.47 E-value=0.00071 Score=62.84 Aligned_cols=97 Identities=22% Similarity=0.242 Sum_probs=62.8
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
-..++|+|+|. |.||..+|..|...|+ +|..+|+....... .... . . ..++++.++.||+|+++..
T Consensus 148 L~gktvgIiG~-G~IG~~vA~~l~~~G~--~V~~~d~~~~~~~~--~~~~-----~---~-~~~l~ell~~aDiV~l~lP 213 (333)
T PRK13243 148 VYGKTIGIIGF-GRIGQAVARRAKGFGM--RILYYSRTRKPEAE--KELG-----A---E-YRPLEELLRESDFVSLHVP 213 (333)
T ss_pred CCCCEEEEECc-CHHHHHHHHHHHHCCC--EEEEECCCCChhhH--HHcC-----C---E-ecCHHHHHhhCCEEEEeCC
Confidence 45679999998 9999999999998898 99999986432111 1111 0 1 1367888999999999873
Q ss_pred CCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEec--CCCC
Q 024248 124 VPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS--NPVN 167 (270)
Q Consensus 124 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~s--NPv~ 167 (270)
... .++ .++ | .+.++.+ .|++++|+++ ..+|
T Consensus 214 ~t~---~T~-~~i--~----~~~~~~m---k~ga~lIN~aRg~~vd 246 (333)
T PRK13243 214 LTK---ETY-HMI--N----EERLKLM---KPTAILVNTARGKVVD 246 (333)
T ss_pred CCh---HHh-hcc--C----HHHHhcC---CCCeEEEECcCchhcC
Confidence 221 111 111 1 2233333 4788999987 4455
No 309
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.45 E-value=0.0014 Score=56.66 Aligned_cols=35 Identities=20% Similarity=0.292 Sum_probs=32.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT 83 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~ 83 (270)
.+|.|+|++|++|+.++..|++.|. +|+++++++.
T Consensus 6 ~~vlItGa~g~iG~~~a~~l~~~G~--~V~~~~r~~~ 40 (238)
T PRK05786 6 KKVAIIGVSEGLGYAVAYFALKEGA--QVCINSRNEN 40 (238)
T ss_pred cEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHH
Confidence 4899999999999999999999998 9999998753
No 310
>PRK07574 formate dehydrogenase; Provisional
Probab=97.45 E-value=0.0017 Score=61.54 Aligned_cols=108 Identities=19% Similarity=0.278 Sum_probs=66.3
Q ss_pred cccccccccc-CCCCCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHH
Q 024248 31 SGLGRMDCRA-KGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLE 109 (270)
Q Consensus 31 ~~~~~~~~~~-~~~~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~ 109 (270)
+.|.+..+.. ......++|+|+|. |.||..++..|...|+ +|..+|+......... ... + ....+++
T Consensus 176 g~W~~~~~~~~~~~L~gktVGIvG~-G~IG~~vA~~l~~fG~--~V~~~dr~~~~~~~~~--~~g----~---~~~~~l~ 243 (385)
T PRK07574 176 GGWNIADCVSRSYDLEGMTVGIVGA-GRIGLAVLRRLKPFDV--KLHYTDRHRLPEEVEQ--ELG----L---TYHVSFD 243 (385)
T ss_pred CCCCcccccccceecCCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEECCCCCchhhHh--hcC----c---eecCCHH
Confidence 4566543211 12345679999997 9999999999998898 9999998642111110 000 0 1123688
Q ss_pred HHhCCCCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEec
Q 024248 110 DALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163 (270)
Q Consensus 110 ~al~~ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~s 163 (270)
+.++.||+|+++..... .+ ..++ | .+.+..+ .+++++|+++
T Consensus 244 ell~~aDvV~l~lPlt~---~T-~~li--~----~~~l~~m---k~ga~lIN~a 284 (385)
T PRK07574 244 SLVSVCDVVTIHCPLHP---ET-EHLF--D----ADVLSRM---KRGSYLVNTA 284 (385)
T ss_pred HHhhcCCEEEEcCCCCH---HH-HHHh--C----HHHHhcC---CCCcEEEECC
Confidence 99999999999863221 01 1111 1 2333333 4788999887
No 311
>PRK12743 oxidoreductase; Provisional
Probab=97.44 E-value=0.012 Score=51.77 Aligned_cols=148 Identities=14% Similarity=0.099 Sum_probs=77.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC-hh--HHHHhhccccCccee--eeeccCCHHHH-------hCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PG--VTADISHMDTNAVVR--GFLGQQQLEDA-------LTG 114 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~-~~--~~~dl~~~~~~~~~~--~i~~t~d~~~a-------l~~ 114 (270)
.+|.|+||+|.+|..++..|++.|. +|++++.... .. ...++.......... .+....+++++ +..
T Consensus 3 k~vlItGas~giG~~~a~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 80 (256)
T PRK12743 3 QVAIVTASDSGIGKACALLLAQQGF--DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGR 80 (256)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3799999999999999999999998 8888765432 11 112222111100100 01111112121 235
Q ss_pred CCEEEEcCCCCCCCC---Cc---hhhhHHhhHHHHHHHHHHHhHh----CCCCEEEEecCCCCCcHHHHHHHHHHhCCCC
Q 024248 115 MDIVIIPAGVPRKPG---MT---RDDLFNINAGIVKTLCEGIAKC----CPKAIVNLISNPVNSTVPIAAEVFKKVGTYD 184 (270)
Q Consensus 115 ADvVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i~~~----~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p 184 (270)
.|+||+++|...... .+ ....+..|+.....+.+.+.++ ...+.++++|.-... .+.+
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~------------~~~~ 148 (256)
T PRK12743 81 IDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEH------------TPLP 148 (256)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeecccc------------CCCC
Confidence 799999998643211 11 1234556666555555554432 223566666643221 0123
Q ss_pred CCCeeeechhhHHHHHHHHHHHhC
Q 024248 185 PKRLLGVTMLDVVRANTFVAEVLG 208 (270)
Q Consensus 185 ~~kviG~t~ldt~r~~~~lA~~l~ 208 (270)
..-.++.++.....+-+.+++.+.
T Consensus 149 ~~~~Y~~sK~a~~~l~~~la~~~~ 172 (256)
T PRK12743 149 GASAYTAAKHALGGLTKAMALELV 172 (256)
T ss_pred CcchhHHHHHHHHHHHHHHHHHhh
Confidence 333455554444456666677654
No 312
>PRK08339 short chain dehydrogenase; Provisional
Probab=97.44 E-value=0.0048 Score=54.79 Aligned_cols=152 Identities=15% Similarity=0.142 Sum_probs=80.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCcceee----eeccCCHHHHh------CC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAVVRG----FLGQQQLEDAL------TG 114 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~~~~----i~~t~d~~~al------~~ 114 (270)
..+.|+|++|.+|..++..|++.|. +|+++|++.... ...++.... ...+.. +....+.++.+ ..
T Consensus 9 k~~lItGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~ 85 (263)
T PRK08339 9 KLAFTTASSKGIGFGVARVLARAGA--DVILLSRNEENLKKAREKIKSES-NVDVSYIVADLTKREDLERTVKELKNIGE 85 (263)
T ss_pred CEEEEeCCCCcHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHHHHhhCC
Confidence 3689999999999999999999998 999999875321 112222110 011110 11111222222 35
Q ss_pred CCEEEEcCCCCCCC---CCc---hhhhHHhhH----HHHHHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCCC
Q 024248 115 MDIVIIPAGVPRKP---GMT---RDDLFNINA----GIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYD 184 (270)
Q Consensus 115 ADvVIi~ag~~~~~---g~~---r~~~~~~N~----~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p 184 (270)
.|++|.++|..... ..+ ....+..|+ ..++.+.+.+++. ..+.||++|..... .+.|
T Consensus 86 iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~-~~g~Ii~isS~~~~------------~~~~ 152 (263)
T PRK08339 86 PDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERK-GFGRIIYSTSVAIK------------EPIP 152 (263)
T ss_pred CcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEEcCcccc------------CCCC
Confidence 89999999864321 111 122344453 3456666666543 34666666643220 0122
Q ss_pred CCCeeeechhhHHHHHHHHHHHhCCCCCccce
Q 024248 185 PKRLLGVTMLDVVRANTFVAEVLGLDPREVDV 216 (270)
Q Consensus 185 ~~kviG~t~ldt~r~~~~lA~~l~v~~~~v~~ 216 (270)
..-.++.++-.-..+-+.+|..++ +..|++
T Consensus 153 ~~~~y~asKaal~~l~~~la~el~--~~gIrV 182 (263)
T PRK08339 153 NIALSNVVRISMAGLVRTLAKELG--PKGITV 182 (263)
T ss_pred cchhhHHHHHHHHHHHHHHHHHhc--ccCeEE
Confidence 112233443333456677777764 344443
No 313
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=97.44 E-value=0.0016 Score=51.73 Aligned_cols=72 Identities=21% Similarity=0.302 Sum_probs=44.5
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHH---HhhccccCcceeeeeccCCHHHHhCCCCEEEEcC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTA---DISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~---dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~a 122 (270)
|||+|+|++|.+|..++..+....-..=+..+|++.....-. ++.... ... +..++|+++.+..+|+||-..
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~-~~~---~~v~~~l~~~~~~~DVvIDfT 75 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIG-PLG---VPVTDDLEELLEEADVVIDFT 75 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSS-T-S---SBEBS-HHHHTTH-SEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcC-Ccc---cccchhHHHhcccCCEEEEcC
Confidence 699999999999999999888844333355667765211112 222221 111 223568989899999988763
No 314
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.43 E-value=0.0085 Score=53.03 Aligned_cols=157 Identities=15% Similarity=0.147 Sum_probs=92.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC--hhHHHHhhccccCcceeeeecc-------CCHHHHhCCCCE
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTNAVVRGFLGQ-------QQLEDALTGMDI 117 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~--~~~~~dl~~~~~~~~~~~i~~t-------~d~~~al~~ADv 117 (270)
+-+.|+|||+-+|..+|..|++.|. +|+|..++.+ +..+.++.+....+..-.+... ....+.+...|+
T Consensus 7 kv~lITGASSGiG~A~A~~l~~~G~--~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi 84 (246)
T COG4221 7 KVALITGASSGIGEATARALAEAGA--KVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI 84 (246)
T ss_pred cEEEEecCcchHHHHHHHHHHHCCC--eEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence 3588999999999999999999999 9999999864 2333344421011110001100 112344678999
Q ss_pred EEEcCCCCCCCC------CchhhhHHhhHHHHHHHH----HHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCC
Q 024248 118 VIIPAGVPRKPG------MTRDDLFNINAGIVKTLC----EGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKR 187 (270)
Q Consensus 118 VIi~ag~~~~~g------~~r~~~~~~N~~i~~~i~----~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~k 187 (270)
+|..||...... .+...++..|+..+.... +.+.+. ..+.||+++.-... + -||-.-
T Consensus 85 LvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r-~~G~IiN~~SiAG~----------~--~y~~~~ 151 (246)
T COG4221 85 LVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVER-KSGHIINLGSIAGR----------Y--PYPGGA 151 (246)
T ss_pred EEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhc-CCceEEEecccccc----------c--cCCCCc
Confidence 999999754311 123456788887665544 444432 35688887754331 1 277788
Q ss_pred eeeechhhHHHHHHHHHHHhCCCCCccceEEEc
Q 024248 188 LLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (270)
Q Consensus 188 viG~t~ldt~r~~~~lA~~l~v~~~~v~~~V~G 220 (270)
+|+-|+....-|-.-|-+.+ ....|++..|-
T Consensus 152 vY~ATK~aV~~fs~~LR~e~--~g~~IRVt~I~ 182 (246)
T COG4221 152 VYGATKAAVRAFSLGLRQEL--AGTGIRVTVIS 182 (246)
T ss_pred cchhhHHHHHHHHHHHHHHh--cCCCeeEEEec
Confidence 88887654433333333333 23556655543
No 315
>PRK12744 short chain dehydrogenase; Provisional
Probab=97.43 E-value=0.005 Score=54.08 Aligned_cols=148 Identities=14% Similarity=0.114 Sum_probs=80.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC--hhH----HHHhhccccCcc-ee-eeeccCCHHHH------
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGV----TADISHMDTNAV-VR-GFLGQQQLEDA------ 111 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~--~~~----~~dl~~~~~~~~-~~-~i~~t~d~~~a------ 111 (270)
.+++.|+|++|.+|..++..|+.+|. +|++++.+.. ... ..++........ +. .+....+.++.
T Consensus 8 ~k~vlItGa~~gIG~~~a~~l~~~G~--~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 85 (257)
T PRK12744 8 GKVVLIAGGAKNLGGLIARDLAAQGA--KAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKA 85 (257)
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCC--cEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHH
Confidence 35899999999999999999999998 8777765421 111 112221110000 00 01111122222
Q ss_pred -hCCCCEEEEcCCCCCCC---CCc---hhhhHHhhHHHHHHHHHHHhHhC-CCCEEEEe-cCCCCCcHHHHHHHHHHhCC
Q 024248 112 -LTGMDIVIIPAGVPRKP---GMT---RDDLFNINAGIVKTLCEGIAKCC-PKAIVNLI-SNPVNSTVPIAAEVFKKVGT 182 (270)
Q Consensus 112 -l~~ADvVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~-sNPv~~~~~i~t~~~~~~sg 182 (270)
+...|++|+++|..... ..+ ....+..|+.....+++.+.+.. +.+.++++ +..... .
T Consensus 86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~-------------~ 152 (257)
T PRK12744 86 AFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGA-------------F 152 (257)
T ss_pred hhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcc-------------c
Confidence 24689999999863211 111 22345667766666666665432 33444433 332221 0
Q ss_pred CCCCCeeeechhhHHHHHHHHHHHhC
Q 024248 183 YDPKRLLGVTMLDVVRANTFVAEVLG 208 (270)
Q Consensus 183 ~p~~kviG~t~ldt~r~~~~lA~~l~ 208 (270)
.|..-.++.++.....+-+.+++.++
T Consensus 153 ~~~~~~Y~~sK~a~~~~~~~la~e~~ 178 (257)
T PRK12744 153 TPFYSAYAGSKAPVEHFTRAASKEFG 178 (257)
T ss_pred CCCcccchhhHHHHHHHHHHHHHHhC
Confidence 12234466766666678888998886
No 316
>KOG2666 consensus UDP-glucose/GDP-mannose dehydrogenase [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=97.43 E-value=0.00024 Score=64.84 Aligned_cols=75 Identities=19% Similarity=0.370 Sum_probs=49.4
Q ss_pred CeEEEEcCCCchHHHHHHHHHh-CCCccEEEEEeCCCChhHH-------------HHhhccccCcceeeeeccCCHHHHh
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKI-NPLVSVLHLYDVVNTPGVT-------------ADISHMDTNAVVRGFLGQQQLEDAL 112 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~-~g~~~eV~LvD~~~~~~~~-------------~dl~~~~~~~~~~~i~~t~d~~~al 112 (270)
+||+.||| |+||...+..++. .+.+ +|+++|++..+--+ .|.... ++-+.+..++|.+.++
T Consensus 2 ~kicciga-gyvggptcavia~kcp~i-~vtvvd~s~~ri~~wnsd~lpiyepgldevv~~---crgknlffstdiekai 76 (481)
T KOG2666|consen 2 VKICCIGA-GYVGGPTCAVIALKCPDI-EVTVVDISVPRINAWNSDKLPIYEPGLDEVVKQ---CRGKNLFFSTDIEKAI 76 (481)
T ss_pred ceEEEecC-cccCCcchheeeecCCce-EEEEEecCchHhhcccCCCCcccCCCHHHHHHH---hcCCceeeecchHHHh
Confidence 59999998 9999987654443 3333 99999998631100 111111 1111133467999999
Q ss_pred CCCCEEEEcCCCCC
Q 024248 113 TGMDIVIIPAGVPR 126 (270)
Q Consensus 113 ~~ADvVIi~ag~~~ 126 (270)
+.||+||+.+.+|-
T Consensus 77 ~eadlvfisvntpt 90 (481)
T KOG2666|consen 77 KEADLVFISVNTPT 90 (481)
T ss_pred hhcceEEEEecCCc
Confidence 99999999987764
No 317
>PRK06057 short chain dehydrogenase; Provisional
Probab=97.43 E-value=0.0042 Score=54.51 Aligned_cols=36 Identities=19% Similarity=0.242 Sum_probs=32.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT 83 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~ 83 (270)
..+|.|+||+|.+|..++..|+++|. +|+++|++..
T Consensus 7 ~~~vlItGasggIG~~~a~~l~~~G~--~v~~~~r~~~ 42 (255)
T PRK06057 7 GRVAVITGGGSGIGLATARRLAAEGA--TVVVGDIDPE 42 (255)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCC--EEEEEeCCHH
Confidence 45899999999999999999999998 9999998753
No 318
>PLN02780 ketoreductase/ oxidoreductase
Probab=97.43 E-value=0.0032 Score=57.97 Aligned_cols=150 Identities=13% Similarity=0.092 Sum_probs=78.5
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCcceee--eeccCC-------HHHHhC--
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAVVRG--FLGQQQ-------LEDALT-- 113 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~~~~--i~~t~d-------~~~al~-- 113 (270)
..+.|+||+|.+|..++..|+++|. +|++++++++.. ...++........+.. +-.+++ +.+.+.
T Consensus 54 ~~~lITGAs~GIG~alA~~La~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~ 131 (320)
T PLN02780 54 SWALVTGPTDGIGKGFAFQLARKGL--NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL 131 (320)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCC--CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence 4799999999999999999999998 999999986421 2223322100011110 001112 222334
Q ss_pred CCCEEEEcCCCCCCC-----CCc---hhhhHHhhHHHHHHHHHHHhHh---CCCCEEEEecCCCCCcHHHHHHHHHHhCC
Q 024248 114 GMDIVIIPAGVPRKP-----GMT---RDDLFNINAGIVKTLCEGIAKC---CPKAIVNLISNPVNSTVPIAAEVFKKVGT 182 (270)
Q Consensus 114 ~ADvVIi~ag~~~~~-----g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~sNPv~~~~~i~t~~~~~~sg 182 (270)
+.|++|..||..... +.+ -...+..|+.....+.+.+... ...+.++++|.-... ...+
T Consensus 132 didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~----------~~~~ 201 (320)
T PLN02780 132 DVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAI----------VIPS 201 (320)
T ss_pred CccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhc----------cCCC
Confidence 355999999864211 111 1234566766555555444321 234556666532210 0001
Q ss_pred CCCCCeeeechhhHHHHHHHHHHHhC
Q 024248 183 YDPKRLLGVTMLDVVRANTFVAEVLG 208 (270)
Q Consensus 183 ~p~~kviG~t~ldt~r~~~~lA~~l~ 208 (270)
.|..-.++.++.....+-+.++.+++
T Consensus 202 ~p~~~~Y~aSKaal~~~~~~L~~El~ 227 (320)
T PLN02780 202 DPLYAVYAATKAYIDQFSRCLYVEYK 227 (320)
T ss_pred CccchHHHHHHHHHHHHHHHHHHHHh
Confidence 22223355554444456666666663
No 319
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=97.42 E-value=0.0013 Score=60.15 Aligned_cols=36 Identities=17% Similarity=0.050 Sum_probs=32.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT 83 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~ 83 (270)
.++|+|+||+|.||..++..|+.+|. +|++++++..
T Consensus 6 ~k~vlVTGas~gIG~~~a~~L~~~G~--~V~~~~r~~~ 41 (322)
T PRK07453 6 KGTVIITGASSGVGLYAAKALAKRGW--HVIMACRNLK 41 (322)
T ss_pred CCEEEEEcCCChHHHHHHHHHHHCCC--EEEEEECCHH
Confidence 44799999999999999999999997 9999998753
No 320
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=97.42 E-value=0.0015 Score=57.63 Aligned_cols=168 Identities=16% Similarity=0.074 Sum_probs=80.9
Q ss_pred EEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhH----H-HHhhccc--------cCcceeeeec----------cCC
Q 024248 51 VLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV----T-ADISHMD--------TNAVVRGFLG----------QQQ 107 (270)
Q Consensus 51 IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~----~-~dl~~~~--------~~~~~~~i~~----------t~d 107 (270)
|+||+||+|+++...|+..+...+|+++-+...... . ..+.+.. ...++..+.+ ..+
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 689999999999998887765228999987653111 1 0111100 0112222211 123
Q ss_pred HHHHhCCCCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCC-CCCcHH-HHHH----HHHHhC
Q 024248 108 LEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP-VNSTVP-IAAE----VFKKVG 181 (270)
Q Consensus 108 ~~~al~~ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNP-v~~~~~-i~t~----~~~~~s 181 (270)
+++..+.+|+||++|+.-. ...+..++...|+..++++++.+.+.... .++.+|.. +...-. -+.+ .-....
T Consensus 81 ~~~L~~~v~~IiH~Aa~v~-~~~~~~~~~~~NV~gt~~ll~la~~~~~~-~~~~iSTa~v~~~~~~~~~~~~~~~~~~~~ 158 (249)
T PF07993_consen 81 YQELAEEVDVIIHCAASVN-FNAPYSELRAVNVDGTRNLLRLAAQGKRK-RFHYISTAYVAGSRPGTIEEKVYPEEEDDL 158 (249)
T ss_dssp HHHHHHH--EEEE--SS-S-BS-S--EEHHHHHHHHHHHHHHHTSSS----EEEEEEGGGTTS-TTT--SSS-HHH--EE
T ss_pred hhccccccceeeecchhhh-hcccchhhhhhHHHHHHHHHHHHHhccCc-ceEEeccccccCCCCCcccccccccccccc
Confidence 4444578999999986432 12233456788999999999999854333 55555431 111000 0000 000000
Q ss_pred CCCCCCeeee--chhhHHHHHHHHHHHhCCCCCccce-EEEc
Q 024248 182 TYDPKRLLGV--TMLDVVRANTFVAEVLGLDPREVDV-PVVG 220 (270)
Q Consensus 182 g~p~~kviG~--t~ldt~r~~~~lA~~l~v~~~~v~~-~V~G 220 (270)
..+....-|. ++..++++....++..|++..-++. .|+|
T Consensus 159 ~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g 200 (249)
T PF07993_consen 159 DPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVG 200 (249)
T ss_dssp E--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-
T ss_pred hhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccc
Confidence 0111122233 7888888888888888998877776 5666
No 321
>PLN02712 arogenate dehydrogenase
Probab=97.42 E-value=0.0012 Score=66.82 Aligned_cols=67 Identities=16% Similarity=0.162 Sum_probs=47.6
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHh-CCCCEEEEc
Q 024248 43 GSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDAL-TGMDIVIIP 121 (270)
Q Consensus 43 ~~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al-~~ADvVIi~ 121 (270)
.+++|||+|||. |.+|..++..|...|+ +|+.+|++.....+.++. + ...+++++.+ ++||+||++
T Consensus 49 ~~~~~kIgIIG~-G~mG~slA~~L~~~G~--~V~~~dr~~~~~~A~~~G-------v---~~~~d~~e~~~~~aDvViLa 115 (667)
T PLN02712 49 NTTQLKIAIIGF-GNYGQFLAKTLISQGH--TVLAHSRSDHSLAARSLG-------V---SFFLDPHDLCERHPDVILLC 115 (667)
T ss_pred cCCCCEEEEEcc-CHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHcC-------C---EEeCCHHHHhhcCCCEEEEc
Confidence 355689999997 9999999999999887 999999874321111111 1 1134565644 579999998
Q ss_pred C
Q 024248 122 A 122 (270)
Q Consensus 122 a 122 (270)
.
T Consensus 116 v 116 (667)
T PLN02712 116 T 116 (667)
T ss_pred C
Confidence 6
No 322
>PRK15059 tartronate semialdehyde reductase; Provisional
Probab=97.41 E-value=0.00084 Score=61.16 Aligned_cols=64 Identities=19% Similarity=0.337 Sum_probs=47.5
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
|||++||. |.+|+.++..|.+.|+ +|.++|+++. ..++.... . ....+..+++++||+||++..
T Consensus 1 m~Ig~IGl-G~MG~~ma~~L~~~G~--~v~v~~~~~~---~~~~~~~g--~-----~~~~s~~~~~~~advVi~~v~ 64 (292)
T PRK15059 1 MKLGFIGL-GIMGTPMAINLARAGH--QLHVTTIGPV---ADELLSLG--A-----VSVETARQVTEASDIIFIMVP 64 (292)
T ss_pred CeEEEEcc-CHHHHHHHHHHHHCCC--eEEEEeCCHh---HHHHHHcC--C-----eecCCHHHHHhcCCEEEEeCC
Confidence 68999997 9999999999999998 9999998642 12232211 0 112356677899999999863
No 323
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.39 E-value=0.0037 Score=54.28 Aligned_cols=36 Identities=22% Similarity=0.351 Sum_probs=32.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT 83 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~ 83 (270)
..++.|+|++|.+|..++..|+.+|. .|+++|++..
T Consensus 5 ~~~~lItG~~g~iG~~~a~~l~~~G~--~vi~~~r~~~ 40 (253)
T PRK08217 5 DKVIVITGGAQGLGRAMAEYLAQKGA--KLALIDLNQE 40 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHH
Confidence 34799999999999999999999998 8999998753
No 324
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.39 E-value=0.0081 Score=52.22 Aligned_cols=147 Identities=16% Similarity=0.172 Sum_probs=75.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEE-eCCCChh--HHHHhhccccCcc-ee-eeeccCCHHHHh-------CC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLY-DVVNTPG--VTADISHMDTNAV-VR-GFLGQQQLEDAL-------TG 114 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~Lv-D~~~~~~--~~~dl~~~~~~~~-~~-~i~~t~d~~~al-------~~ 114 (270)
+++.|+||+|.+|..++..|+++|. +|+++ +++.... ...++........ +. .+....++++++ ..
T Consensus 5 ~~vlItGa~g~iG~~~a~~l~~~g~--~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK08063 5 KVALVTGSSRGIGKAIALRLAEEGY--DIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR 82 (250)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5899999999999999999999998 87764 4443221 1122221111000 00 011111222222 36
Q ss_pred CCEEEEcCCCCCCCC---Cch---hhhHHhhHHHHHHHHHHHhHhC---CCCEEEEecCCCCCcHHHHHHHHHHhCCCCC
Q 024248 115 MDIVIIPAGVPRKPG---MTR---DDLFNINAGIVKTLCEGIAKCC---PKAIVNLISNPVNSTVPIAAEVFKKVGTYDP 185 (270)
Q Consensus 115 ADvVIi~ag~~~~~g---~~r---~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~ 185 (270)
.|+||+.+|...... .+. ...+..|......+++.+.++. +.+.|+++|..... .+.+.
T Consensus 83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~------------~~~~~ 150 (250)
T PRK08063 83 LDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSI------------RYLEN 150 (250)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhc------------cCCCC
Confidence 899999987542111 111 1134566665555665555432 33466666542210 01233
Q ss_pred CCeeeechhhHHHHHHHHHHHh
Q 024248 186 KRLLGVTMLDVVRANTFVAEVL 207 (270)
Q Consensus 186 ~kviG~t~ldt~r~~~~lA~~l 207 (270)
.-.++.++.....+-+.+++.+
T Consensus 151 ~~~y~~sK~a~~~~~~~~~~~~ 172 (250)
T PRK08063 151 YTTVGVSKAALEALTRYLAVEL 172 (250)
T ss_pred ccHHHHHHHHHHHHHHHHHHHH
Confidence 3345555555555666666654
No 325
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=97.39 E-value=0.0037 Score=63.42 Aligned_cols=150 Identities=18% Similarity=0.133 Sum_probs=81.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCcceee----eeccCCHHHHh-------
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAVVRG----FLGQQQLEDAL------- 112 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~~~~----i~~t~d~~~al------- 112 (270)
.++|.|+||+|.+|..++..|++.|. +|+++|++.... ...++........... +....++++++
T Consensus 414 gkvvLVTGasggIG~aiA~~La~~Ga--~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~ 491 (676)
T TIGR02632 414 RRVAFVTGGAGGIGRETARRLAAEGA--HVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAY 491 (676)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHhCCC--EEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 45799999999999999999999998 999999975321 1122221100000000 11111222333
Q ss_pred CCCCEEEEcCCCCCCCC---Cch---hhhHHhhHH----HHHHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCC
Q 024248 113 TGMDIVIIPAGVPRKPG---MTR---DDLFNINAG----IVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGT 182 (270)
Q Consensus 113 ~~ADvVIi~ag~~~~~g---~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg 182 (270)
.+.|+||+++|...... .+. ...+..|+. ..+.+++.+++....+.++++|..... .+
T Consensus 492 g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~------------~~ 559 (676)
T TIGR02632 492 GGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAV------------YA 559 (676)
T ss_pred CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhc------------CC
Confidence 36899999998643111 111 112333433 234555666554444555555532210 01
Q ss_pred CCCCCeeeechhhHHHHHHHHHHHhCC
Q 024248 183 YDPKRLLGVTMLDVVRANTFVAEVLGL 209 (270)
Q Consensus 183 ~p~~kviG~t~ldt~r~~~~lA~~l~v 209 (270)
.+..-.++.++.....+.+.++..++-
T Consensus 560 ~~~~~aY~aSKaA~~~l~r~lA~el~~ 586 (676)
T TIGR02632 560 GKNASAYSAAKAAEAHLARCLAAEGGT 586 (676)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhcc
Confidence 222334566666666777778887653
No 326
>PRK14982 acyl-ACP reductase; Provisional
Probab=97.39 E-value=0.0012 Score=61.45 Aligned_cols=72 Identities=29% Similarity=0.345 Sum_probs=50.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhH--HHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcC
Q 024248 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV--TADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (270)
Q Consensus 45 ~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~--~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~a 122 (270)
+.++|+|+||+|++|+.++..|+.+.-+.+|+++++++.... ..++.... ..++++++.++|+||+++
T Consensus 154 ~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~----------i~~l~~~l~~aDiVv~~t 223 (340)
T PRK14982 154 SKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGK----------ILSLEEALPEADIVVWVA 223 (340)
T ss_pred CCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcccc----------HHhHHHHHccCCEEEECC
Confidence 456899999999999999999976422358999998643221 11222111 125678899999999998
Q ss_pred CCCC
Q 024248 123 GVPR 126 (270)
Q Consensus 123 g~~~ 126 (270)
+.+.
T Consensus 224 s~~~ 227 (340)
T PRK14982 224 SMPK 227 (340)
T ss_pred cCCc
Confidence 8763
No 327
>PRK06483 dihydromonapterin reductase; Provisional
Probab=97.39 E-value=0.0039 Score=54.01 Aligned_cols=148 Identities=13% Similarity=0.079 Sum_probs=77.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCH-------HHHhCCCCEE
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQL-------EDALTGMDIV 118 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~-------~~al~~ADvV 118 (270)
++++.|+||+|.+|..++..|+.+|. +|++.|+++... ..++.+.......-.+....+. .+.+...|++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 78 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ--PVIVSYRTHYPA-IDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAI 78 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC--eEEEEeCCchhH-HHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEE
Confidence 34799999999999999999999998 999999875321 1122111000000001111111 1123458999
Q ss_pred EEcCCCCCCC--C-Cc---hhhhHHhhHHHHH----HHHHHHhHhCC-CCEEEEecCCCCCcHHHHHHHHHHhCCCCCCC
Q 024248 119 IIPAGVPRKP--G-MT---RDDLFNINAGIVK----TLCEGIAKCCP-KAIVNLISNPVNSTVPIAAEVFKKVGTYDPKR 187 (270)
Q Consensus 119 Ii~ag~~~~~--g-~~---r~~~~~~N~~i~~----~i~~~i~~~~p-~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~k 187 (270)
|+++|..... . .+ ....+..|+.... .+.+.+++... .+.++++|.... . .+.+..-
T Consensus 79 v~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~-----------~-~~~~~~~ 146 (236)
T PRK06483 79 IHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVV-----------E-KGSDKHI 146 (236)
T ss_pred EECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhh-----------c-cCCCCCc
Confidence 9999863211 1 11 1223444544433 34444443221 345555543211 0 1233334
Q ss_pred eeeechhhHHHHHHHHHHHhC
Q 024248 188 LLGVTMLDVVRANTFVAEVLG 208 (270)
Q Consensus 188 viG~t~ldt~r~~~~lA~~l~ 208 (270)
.++.++..-..+-+.+++.++
T Consensus 147 ~Y~asKaal~~l~~~~a~e~~ 167 (236)
T PRK06483 147 AYAASKAALDNMTLSFAAKLA 167 (236)
T ss_pred cHHHHHHHHHHHHHHHHHHHC
Confidence 466655555567788888875
No 328
>COG1893 ApbA Ketopantoate reductase [Coenzyme metabolism]
Probab=97.39 E-value=0.0015 Score=60.00 Aligned_cols=118 Identities=22% Similarity=0.325 Sum_probs=70.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC-hhHH---HHhhccccCcceeeeeccCCHHHHhCCCCEEEEcC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVT---ADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~-~~~~---~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~a 122 (270)
|||+|+|+ |-||+.+++.|.+.|. .|+++-+.+. .... +.+.+........ ...+++ .+....+|+||++.
T Consensus 1 mkI~IlGa-GAvG~l~g~~L~~~g~--~V~~~~R~~~~~~l~~~GL~i~~~~~~~~~~-~~~~~~-~~~~~~~Dlviv~v 75 (307)
T COG1893 1 MKILILGA-GAIGSLLGARLAKAGH--DVTLLVRSRRLEALKKKGLRIEDEGGNFTTP-VVAATD-AEALGPADLVIVTV 75 (307)
T ss_pred CeEEEECC-cHHHHHHHHHHHhCCC--eEEEEecHHHHHHHHhCCeEEecCCCccccc-cccccC-hhhcCCCCEEEEEe
Confidence 79999998 9999999999999995 8888877542 1100 1111111100111 111223 36677999999997
Q ss_pred CCCCCCCCchhhhHHhhHHHHHHHHHHHhHhC-CCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCee-eec
Q 024248 123 GVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLL-GVT 192 (270)
Q Consensus 123 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kvi-G~t 192 (270)
-..+ ..+.++.+..+. |+++|+..=|-... -+.+.+. +|+++++ |+|
T Consensus 76 Ka~q----------------~~~al~~l~~~~~~~t~vl~lqNG~g~-----~e~l~~~--~~~~~il~G~~ 124 (307)
T COG1893 76 KAYQ----------------LEEALPSLAPLLGPNTVVLFLQNGLGH-----EEELRKI--LPKETVLGGVT 124 (307)
T ss_pred cccc----------------HHHHHHHhhhcCCCCcEEEEEeCCCcH-----HHHHHHh--CCcceEEEEEe
Confidence 3321 144566666655 56777777788772 2333443 5666564 454
No 329
>PRK08251 short chain dehydrogenase; Provisional
Probab=97.38 E-value=0.015 Score=50.61 Aligned_cols=35 Identities=23% Similarity=0.260 Sum_probs=31.6
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT 83 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~ 83 (270)
+++.|+||+|.+|.+++..|+++|. +|++.+++..
T Consensus 3 k~vlItGas~giG~~la~~l~~~g~--~v~~~~r~~~ 37 (248)
T PRK08251 3 QKILITGASSGLGAGMAREFAAKGR--DLALCARRTD 37 (248)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCC--EEEEEeCCHH
Confidence 4799999999999999999999997 9999998753
No 330
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.38 E-value=0.00084 Score=56.60 Aligned_cols=96 Identities=23% Similarity=0.316 Sum_probs=60.1
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcC
Q 024248 43 GSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (270)
Q Consensus 43 ~~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~a 122 (270)
.....+|+|+|. |.||..+|..+...|. +|+.+|+...... ...+.. + ...++++.++.||+|+++.
T Consensus 33 ~l~g~tvgIiG~-G~IG~~vA~~l~~fG~--~V~~~d~~~~~~~--~~~~~~-------~-~~~~l~ell~~aDiv~~~~ 99 (178)
T PF02826_consen 33 ELRGKTVGIIGY-GRIGRAVARRLKAFGM--RVIGYDRSPKPEE--GADEFG-------V-EYVSLDELLAQADIVSLHL 99 (178)
T ss_dssp -STTSEEEEEST-SHHHHHHHHHHHHTT---EEEEEESSCHHHH--HHHHTT-------E-EESSHHHHHHH-SEEEE-S
T ss_pred ccCCCEEEEEEE-cCCcCeEeeeeecCCc--eeEEecccCChhh--hccccc-------c-eeeehhhhcchhhhhhhhh
Confidence 345679999997 9999999999999999 9999999754222 111111 1 1237889999999999987
Q ss_pred CCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecC
Q 024248 123 GVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISN 164 (270)
Q Consensus 123 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sN 164 (270)
..... ++ .++ | .+.+..+ .+++++||++-
T Consensus 100 plt~~---T~-~li--~----~~~l~~m---k~ga~lvN~aR 128 (178)
T PF02826_consen 100 PLTPE---TR-GLI--N----AEFLAKM---KPGAVLVNVAR 128 (178)
T ss_dssp SSSTT---TT-TSB--S----HHHHHTS---TTTEEEEESSS
T ss_pred ccccc---cc-eee--e----eeeeecc---ccceEEEeccc
Confidence 43211 11 111 2 2233333 36789999873
No 331
>PRK09242 tropinone reductase; Provisional
Probab=97.38 E-value=0.0028 Score=55.62 Aligned_cols=148 Identities=16% Similarity=0.113 Sum_probs=78.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCcceee----eeccCC-------HHHHh
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAVVRG----FLGQQQ-------LEDAL 112 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~~~~----i~~t~d-------~~~al 112 (270)
.+++.|+|++|.+|..++..|+.+|. +|++++++.+.. ...++........+.. +....+ ..+.+
T Consensus 9 ~k~~lItGa~~gIG~~~a~~l~~~G~--~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 86 (257)
T PRK09242 9 GQTALITGASKGIGLAIAREFLGLGA--DVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHW 86 (257)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 34799999999999999999999998 999999875321 1223322100011110 111111 12234
Q ss_pred CCCCEEEEcCCCCCC-C--CCc---hhhhHHhhHHHHHHHHHHHhHh---CCCCEEEEecCCCCCcHHHHHHHHHHhCCC
Q 024248 113 TGMDIVIIPAGVPRK-P--GMT---RDDLFNINAGIVKTLCEGIAKC---CPKAIVNLISNPVNSTVPIAAEVFKKVGTY 183 (270)
Q Consensus 113 ~~ADvVIi~ag~~~~-~--g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~sNPv~~~~~i~t~~~~~~sg~ 183 (270)
...|+||+++|.... + ..+ ....+..|+.....+++.+.++ .+.+.++++|..... .+.
T Consensus 87 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~------------~~~ 154 (257)
T PRK09242 87 DGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGL------------THV 154 (257)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccC------------CCC
Confidence 568999999986321 1 111 1223455666555554444321 234566666543221 012
Q ss_pred CCCCeeeechhhHHHHHHHHHHHh
Q 024248 184 DPKRLLGVTMLDVVRANTFVAEVL 207 (270)
Q Consensus 184 p~~kviG~t~ldt~r~~~~lA~~l 207 (270)
+..-.++.++.....+-+.+|..+
T Consensus 155 ~~~~~Y~~sK~a~~~~~~~la~e~ 178 (257)
T PRK09242 155 RSGAPYGMTKAALLQMTRNLAVEW 178 (257)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHH
Confidence 222335555544445666666665
No 332
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=97.38 E-value=0.0022 Score=59.03 Aligned_cols=92 Identities=17% Similarity=0.252 Sum_probs=60.8
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCCC
Q 024248 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGV 124 (270)
Q Consensus 45 ~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag~ 124 (270)
+.++|+|+|. |.||..++..|...|+ +|..+|+...... ... .+....++++.+++||+|+++...
T Consensus 135 ~g~tvgIvG~-G~IG~~vA~~l~afG~--~V~~~~~~~~~~~--~~~---------~~~~~~~l~e~l~~aDvvv~~lPl 200 (312)
T PRK15469 135 EDFTIGILGA-GVLGSKVAQSLQTWGF--PLRCWSRSRKSWP--GVQ---------SFAGREELSAFLSQTRVLINLLPN 200 (312)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCCCCCC--Cce---------eecccccHHHHHhcCCEEEECCCC
Confidence 4469999997 9999999999998898 9999997542110 000 011124688999999999998632
Q ss_pred CCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEec
Q 024248 125 PRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163 (270)
Q Consensus 125 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~s 163 (270)
. ..+..++. .+.+.+..|++++||++
T Consensus 201 t-----------~~T~~li~--~~~l~~mk~ga~lIN~a 226 (312)
T PRK15469 201 T-----------PETVGIIN--QQLLEQLPDGAYLLNLA 226 (312)
T ss_pred C-----------HHHHHHhH--HHHHhcCCCCcEEEECC
Confidence 1 11111221 23344444789999997
No 333
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.37 E-value=0.0034 Score=54.18 Aligned_cols=143 Identities=16% Similarity=0.128 Sum_probs=77.6
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeecc-CCHHHHhCCCCEEEEcCCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQ-QQLEDALTGMDIVIIPAGVP 125 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t-~d~~~al~~ADvVIi~ag~~ 125 (270)
+++.|+|++|.+|.+++..|+++|+ +|++++++.......++... ... +... ....+.+...|+||.++|..
T Consensus 6 k~~lVtGas~~iG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~--~~D---~~~~~~~~~~~~~~id~lv~~ag~~ 78 (235)
T PRK06550 6 KTVLITGAASGIGLAQARAFLAQGA--QVYGVDKQDKPDLSGNFHFL--QLD---LSDDLEPLFDWVPSVDILCNTAGIL 78 (235)
T ss_pred CEEEEcCCCchHHHHHHHHHHHCCC--EEEEEeCCcccccCCcEEEE--ECC---hHHHHHHHHHhhCCCCEEEECCCCC
Confidence 4799999999999999999999998 99999987532100000000 000 0000 01122345789999999853
Q ss_pred C--CC--CCc---hhhhHHhhHHHHHHHHHHHhHh---CCCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCCeeeechhh
Q 024248 126 R--KP--GMT---RDDLFNINAGIVKTLCEGIAKC---CPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGVTMLD 195 (270)
Q Consensus 126 ~--~~--g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~kviG~t~ld 195 (270)
. .+ ..+ ....+..|+.....+++.+... ...+.++++|..... .+.+..-.++.++..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~------------~~~~~~~~Y~~sK~a 146 (235)
T PRK06550 79 DDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASF------------VAGGGGAAYTASKHA 146 (235)
T ss_pred CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhc------------cCCCCCcccHHHHHH
Confidence 2 11 111 1234566766555555555432 233556655532220 012223345555444
Q ss_pred HHHHHHHHHHHhC
Q 024248 196 VVRANTFVAEVLG 208 (270)
Q Consensus 196 t~r~~~~lA~~l~ 208 (270)
...+.+.+++.++
T Consensus 147 ~~~~~~~la~~~~ 159 (235)
T PRK06550 147 LAGFTKQLALDYA 159 (235)
T ss_pred HHHHHHHHHHHhh
Confidence 4456677777774
No 334
>PRK07454 short chain dehydrogenase; Provisional
Probab=97.37 E-value=0.0033 Score=54.52 Aligned_cols=34 Identities=24% Similarity=0.285 Sum_probs=31.3
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~ 82 (270)
+++.|+|++|.+|..++..|+++|. +|++++++.
T Consensus 7 k~vlItG~sg~iG~~la~~l~~~G~--~V~~~~r~~ 40 (241)
T PRK07454 7 PRALITGASSGIGKATALAFAKAGW--DLALVARSQ 40 (241)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 3799999999999999999999998 999999875
No 335
>PRK08605 D-lactate dehydrogenase; Validated
Probab=97.37 E-value=0.00087 Score=62.20 Aligned_cols=65 Identities=28% Similarity=0.339 Sum_probs=47.2
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHH-hCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMK-INPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~-~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~a 122 (270)
-..+||+|||. |.+|..+|..|+ ..|+ +|..+|+...... .+. +....++++++++||+|+++.
T Consensus 144 l~g~~VgIIG~-G~IG~~vA~~L~~~~g~--~V~~~d~~~~~~~-~~~-----------~~~~~~l~ell~~aDvIvl~l 208 (332)
T PRK08605 144 IKDLKVAVIGT-GRIGLAVAKIFAKGYGS--DVVAYDPFPNAKA-ATY-----------VDYKDTIEEAVEGADIVTLHM 208 (332)
T ss_pred eCCCEEEEECC-CHHHHHHHHHHHhcCCC--EEEEECCCccHhH-Hhh-----------ccccCCHHHHHHhCCEEEEeC
Confidence 45679999998 999999999884 3566 9999998643211 110 112347889999999999987
Q ss_pred C
Q 024248 123 G 123 (270)
Q Consensus 123 g 123 (270)
.
T Consensus 209 P 209 (332)
T PRK08605 209 P 209 (332)
T ss_pred C
Confidence 3
No 336
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=97.36 E-value=0.008 Score=52.90 Aligned_cols=156 Identities=13% Similarity=0.105 Sum_probs=82.6
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh---HHHHhhccccCcceeee-eccCCH---HHH-------
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG---VTADISHMDTNAVVRGF-LGQQQL---EDA------- 111 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~---~~~dl~~~~~~~~~~~i-~~t~d~---~~a------- 111 (270)
.+++.|+||+|.+|..++..|+.+|. .|++..++.... ...++.... ..+..+ ...+|. ++.
T Consensus 7 ~k~~lItGa~~gIG~~ia~~l~~~G~--~vvi~~~~~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~i~~~~~~~~~~ 82 (261)
T PRK08936 7 GKVVVITGGSTGLGRAMAVRFGKEKA--KVVINYRSDEEEANDVAEEIKKAG--GEAIAVKGDVTVESDVVNLIQTAVKE 82 (261)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHHcC--CeEEEEEecCCCHHHHHHHHHHHHHH
Confidence 35899999999999999999999998 888877754211 112222111 111100 011122 111
Q ss_pred hCCCCEEEEcCCCCCCCC---Cch---hhhHHhhHHHH----HHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhC
Q 024248 112 LTGMDIVIIPAGVPRKPG---MTR---DDLFNINAGIV----KTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVG 181 (270)
Q Consensus 112 l~~ADvVIi~ag~~~~~g---~~r---~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~s 181 (270)
+...|++|+.+|...... .+. ...+..|+... +.+++.+.+....+.++++|.-... .
T Consensus 83 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~------------~ 150 (261)
T PRK08936 83 FGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQ------------I 150 (261)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccc------------C
Confidence 235799999998643211 111 12345664433 4455555554445666666542210 1
Q ss_pred CCCCCCeeeechhhHHHHHHHHHHHhCCCCCccceEEE
Q 024248 182 TYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVV 219 (270)
Q Consensus 182 g~p~~kviG~t~ldt~r~~~~lA~~l~v~~~~v~~~V~ 219 (270)
..|..-.++.++.....+-+.++..+. +..|++.++
T Consensus 151 ~~~~~~~Y~~sKaa~~~~~~~la~e~~--~~gi~v~~v 186 (261)
T PRK08936 151 PWPLFVHYAASKGGVKLMTETLAMEYA--PKGIRVNNI 186 (261)
T ss_pred CCCCCcccHHHHHHHHHHHHHHHHHHh--hcCeEEEEE
Confidence 233334566654444456666766663 334554444
No 337
>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]
Probab=97.36 E-value=0.0017 Score=56.71 Aligned_cols=68 Identities=19% Similarity=0.320 Sum_probs=44.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhC-CCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~-g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
|||+|||. |.+|..+...+... .-++-+.+||++.++... +...-. . ...+++.+.+.+.|++|.+|+
T Consensus 1 l~vgiVGc-GaIG~~l~e~v~~~~~~~e~v~v~D~~~ek~~~--~~~~~~-~-----~~~s~ide~~~~~DlvVEaAS 69 (255)
T COG1712 1 LKVGIVGC-GAIGKFLLELVRDGRVDFELVAVYDRDEEKAKE--LEASVG-R-----RCVSDIDELIAEVDLVVEAAS 69 (255)
T ss_pred CeEEEEec-cHHHHHHHHHHhcCCcceeEEEEecCCHHHHHH--HHhhcC-C-----CccccHHHHhhccceeeeeCC
Confidence 68999997 99999999877765 235678899998654322 221100 0 112356565677777777763
No 338
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.35 E-value=0.0049 Score=56.08 Aligned_cols=101 Identities=24% Similarity=0.285 Sum_probs=58.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC-h--hHHHHhhccccCcceee----eeccCCHHHH------h
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-P--GVTADISHMDTNAVVRG----FLGQQQLEDA------L 112 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~-~--~~~~dl~~~~~~~~~~~----i~~t~d~~~a------l 112 (270)
.+++.|+||+|.+|..++..|+.+|. .|++.|+... . ..+.++.... ..+.. +....+.++. +
T Consensus 12 ~k~~lVTGas~gIG~~ia~~L~~~Ga--~Vv~~~~~~~~~~~~~~~~i~~~g--~~~~~~~~Dv~d~~~~~~~~~~~~~~ 87 (306)
T PRK07792 12 GKVAVVTGAAAGLGRAEALGLARLGA--TVVVNDVASALDASDVLDEIRAAG--AKAVAVAGDISQRATADELVATAVGL 87 (306)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--EEEEecCCchhHHHHHHHHHHhcC--CeEEEEeCCCCCHHHHHHHHHHHHHh
Confidence 45899999999999999999999998 9999997542 1 1122232211 11110 1101112121 2
Q ss_pred CCCCEEEEcCCCCCCCC---Cc---hhhhHHhhHHHHHHHHHHH
Q 024248 113 TGMDIVIIPAGVPRKPG---MT---RDDLFNINAGIVKTLCEGI 150 (270)
Q Consensus 113 ~~ADvVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i 150 (270)
...|++|+++|...... .+ ....+..|+.....+++.+
T Consensus 88 g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~ 131 (306)
T PRK07792 88 GGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNA 131 (306)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHH
Confidence 46899999998754321 11 2234566666555555543
No 339
>PRK05867 short chain dehydrogenase; Provisional
Probab=97.34 E-value=0.0055 Score=53.66 Aligned_cols=156 Identities=18% Similarity=0.161 Sum_probs=82.2
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCcceee----eeccCCHHH-------HhC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAVVRG----FLGQQQLED-------ALT 113 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~~~~----i~~t~d~~~-------al~ 113 (270)
+++.|+|++|.+|..++..|+..|. +|++.+++.... ...++.... ..+.. +....+.++ .+.
T Consensus 10 k~vlVtGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g 85 (253)
T PRK05867 10 KRALITGASTGIGKRVALAYVEAGA--QVAIAARHLDALEKLADEIGTSG--GKVVPVCCDVSQHQQVTSMLDQVTAELG 85 (253)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhcC--CeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 4799999999999999999999998 999999875321 112222211 11111 111111222 234
Q ss_pred CCCEEEEcCCCCCCCC---Cc---hhhhHHhhHHHHHHHHHHH----hHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCC
Q 024248 114 GMDIVIIPAGVPRKPG---MT---RDDLFNINAGIVKTLCEGI----AKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTY 183 (270)
Q Consensus 114 ~ADvVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~ 183 (270)
..|++|+++|...... .+ ....+..|+.....+.+.+ .+....+.+++++.-.. .....
T Consensus 86 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~-----------~~~~~ 154 (253)
T PRK05867 86 GIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSG-----------HIINV 154 (253)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHh-----------cCCCC
Confidence 7899999998643111 11 1223456665544444444 33222355665542111 00011
Q ss_pred CCC-CeeeechhhHHHHHHHHHHHhCCCCCccceEEE
Q 024248 184 DPK-RLLGVTMLDVVRANTFVAEVLGLDPREVDVPVV 219 (270)
Q Consensus 184 p~~-kviG~t~ldt~r~~~~lA~~l~v~~~~v~~~V~ 219 (270)
|.. -.++.++..-..+-+.+++.+. +..|++..+
T Consensus 155 ~~~~~~Y~asKaal~~~~~~la~e~~--~~gI~vn~i 189 (253)
T PRK05867 155 PQQVSHYCASKAAVIHLTKAMAVELA--PHKIRVNSV 189 (253)
T ss_pred CCCccchHHHHHHHHHHHHHHHHHHh--HhCeEEEEe
Confidence 212 2355555444567777777764 334544333
No 340
>PRK08703 short chain dehydrogenase; Provisional
Probab=97.33 E-value=0.0068 Score=52.57 Aligned_cols=151 Identities=17% Similarity=0.141 Sum_probs=79.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccc-cCcc-ee-eeec--cCCHHH-------H
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMD-TNAV-VR-GFLG--QQQLED-------A 111 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~-~~~~-~~-~i~~--t~d~~~-------a 111 (270)
.++|.|+|++|.+|..++..|+.+|. +|++++++.... ...++.... .... +. .+.. ..++++ .
T Consensus 6 ~k~vlItG~sggiG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 6 DKTILVTGASQGLGEQVAKAYAAAGA--TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHcCC--EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 35899999999999999999999998 999999976321 112221110 0000 00 0110 011211 1
Q ss_pred h-CCCCEEEEcCCCCCC--C-C-Cch---hhhHHhhHHHHHHHHHHHhHh---CCCCEEEEecCCCCCcHHHHHHHHHHh
Q 024248 112 L-TGMDIVIIPAGVPRK--P-G-MTR---DDLFNINAGIVKTLCEGIAKC---CPKAIVNLISNPVNSTVPIAAEVFKKV 180 (270)
Q Consensus 112 l-~~ADvVIi~ag~~~~--~-g-~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~sNPv~~~~~i~t~~~~~~ 180 (270)
+ ...|+||+++|.... + . .+. ...+..|+.....+++.+.+. ...+.+++++.....
T Consensus 84 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~------------ 151 (239)
T PRK08703 84 TQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGE------------ 151 (239)
T ss_pred hCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccc------------
Confidence 2 467999999985321 1 1 111 123456665544444444322 234555555532221
Q ss_pred CCCCCCCeeeechhhHHHHHHHHHHHhCCC
Q 024248 181 GTYDPKRLLGVTMLDVVRANTFVAEVLGLD 210 (270)
Q Consensus 181 sg~p~~kviG~t~ldt~r~~~~lA~~l~v~ 210 (270)
.+.+..-.++.++.....+.+.++..++-.
T Consensus 152 ~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~ 181 (239)
T PRK08703 152 TPKAYWGGFGASKAALNYLCKVAADEWERF 181 (239)
T ss_pred cCCCCccchHHhHHHHHHHHHHHHHHhccC
Confidence 012222335665544456777778877543
No 341
>PRK06476 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.33 E-value=0.0017 Score=57.86 Aligned_cols=68 Identities=16% Similarity=0.223 Sum_probs=46.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCC-ccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~-~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~a 122 (270)
|||+|||+ |.+|+.++..|...++ ..++.++|++.+.. ..+... .... ..+++.++.+++||+||++.
T Consensus 1 m~IgiIG~-G~mG~aia~~L~~~g~~~~~i~v~~r~~~~~--~~l~~~--~~~~---~~~~~~~~~~~~aDvVilav 69 (258)
T PRK06476 1 MKIGFIGT-GAITEAMVTGLLTSPADVSEIIVSPRNAQIA--ARLAER--FPKV---RIAKDNQAVVDRSDVVFLAV 69 (258)
T ss_pred CeEEEECc-CHHHHHHHHHHHhCCCChheEEEECCCHHHH--HHHHHH--cCCc---eEeCCHHHHHHhCCEEEEEe
Confidence 68999997 9999999999988775 23567787754322 222221 0111 11346667788999999986
No 342
>PRK06139 short chain dehydrogenase; Provisional
Probab=97.33 E-value=0.0071 Score=55.95 Aligned_cols=116 Identities=17% Similarity=0.104 Sum_probs=64.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCcc-ee-eeeccCCHHHH-------hCC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAV-VR-GFLGQQQLEDA-------LTG 114 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~-~~-~i~~t~d~~~a-------l~~ 114 (270)
.++|+|+||+|.+|..++..|+.+|. +|+++++++... ...++........ +. .+....+++++ +..
T Consensus 7 ~k~vlITGAs~GIG~aia~~la~~G~--~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (330)
T PRK06139 7 GAVVVITGASSGIGQATAEAFARRGA--RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGR 84 (330)
T ss_pred CCEEEEcCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 34799999999999999999999998 999999875321 1122222111000 00 11111122222 246
Q ss_pred CCEEEEcCCCCCCCC---Cc---hhhhHHhhHHHHHHH----HHHHhHhCCCCEEEEecC
Q 024248 115 MDIVIIPAGVPRKPG---MT---RDDLFNINAGIVKTL----CEGIAKCCPKAIVNLISN 164 (270)
Q Consensus 115 ADvVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i----~~~i~~~~p~a~viv~sN 164 (270)
.|++|.++|...... .+ ....+..|+.....+ ++.+.+. ..+.+|+++.
T Consensus 85 iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~-~~g~iV~isS 143 (330)
T PRK06139 85 IDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQ-GHGIFINMIS 143 (330)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHc-CCCEEEEEcC
Confidence 799999998643211 11 123455665544443 4444432 2456666553
No 343
>PLN02503 fatty acyl-CoA reductase 2
Probab=97.32 E-value=0.0027 Score=63.51 Aligned_cols=107 Identities=16% Similarity=0.119 Sum_probs=66.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCC-CccEEEEEeCCCCh--h--HH-HHhhcc-----------cc-----Ccceeeee
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTP--G--VT-ADISHM-----------DT-----NAVVRGFL 103 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g-~~~eV~LvD~~~~~--~--~~-~dl~~~-----------~~-----~~~~~~i~ 103 (270)
.++|.|+||+||+|..++..|+..+ -+.+|+++.+.... + .. .++.+. .. ..++..+.
T Consensus 119 ~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v~ 198 (605)
T PLN02503 119 GKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPVV 198 (605)
T ss_pred CCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEEE
Confidence 5789999999999999999888654 34688888775421 1 11 112110 00 01121111
Q ss_pred c--c--------CCHHHHhCCCCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHh
Q 024248 104 G--Q--------QQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKC 153 (270)
Q Consensus 104 ~--t--------~d~~~al~~ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~ 153 (270)
+ + .+++...++.|+||++|+... ...+.......|+....++++.+.+.
T Consensus 199 GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~-f~~~~~~a~~vNV~GT~nLLelA~~~ 257 (605)
T PLN02503 199 GNVCESNLGLEPDLADEIAKEVDVIINSAANTT-FDERYDVAIDINTRGPCHLMSFAKKC 257 (605)
T ss_pred eeCCCcccCCCHHHHHHHHhcCCEEEECccccc-cccCHHHHHHHHHHHHHHHHHHHHHc
Confidence 1 1 123344568999999987643 23334556788999999999998765
No 344
>PRK07775 short chain dehydrogenase; Provisional
Probab=97.31 E-value=0.0081 Score=53.50 Aligned_cols=147 Identities=13% Similarity=0.062 Sum_probs=78.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhH-H-HHhhccccCcceeeee-ccCC---HHHH-------
Q 024248 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV-T-ADISHMDTNAVVRGFL-GQQQ---LEDA------- 111 (270)
Q Consensus 45 ~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~-~-~dl~~~~~~~~~~~i~-~t~d---~~~a------- 111 (270)
+.+.+.|+||+|++|.+++..|+.+|. +|++++++..... . .++.... ..+..+. ..++ ++++
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGF--PVALGARRVEKCEELVDKIRADG--GEAVAFPLDVTDPDSVKSFVAQAEEA 84 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHh
Confidence 334799999999999999999999998 8999988643111 1 1121110 0111000 1112 2222
Q ss_pred hCCCCEEEEcCCCCCCCC---Cc---hhhhHHhhHHHHHHHHHHHhHh---CCCCEEEEecCCCCCcHHHHHHHHHHhCC
Q 024248 112 LTGMDIVIIPAGVPRKPG---MT---RDDLFNINAGIVKTLCEGIAKC---CPKAIVNLISNPVNSTVPIAAEVFKKVGT 182 (270)
Q Consensus 112 l~~ADvVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~sNPv~~~~~i~t~~~~~~sg 182 (270)
+...|+||+++|...... .+ ..+.+..|+.....+.+.+.+. ...+.|+++|.... . .+
T Consensus 85 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~-----------~-~~ 152 (274)
T PRK07775 85 LGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVA-----------L-RQ 152 (274)
T ss_pred cCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHh-----------c-CC
Confidence 346799999998643111 11 1223456666555555554321 12345555553211 0 12
Q ss_pred CCCCCeeeechhhHHHHHHHHHHHh
Q 024248 183 YDPKRLLGVTMLDVVRANTFVAEVL 207 (270)
Q Consensus 183 ~p~~kviG~t~ldt~r~~~~lA~~l 207 (270)
.|..-.++.++.....+.+.+++.+
T Consensus 153 ~~~~~~Y~~sK~a~~~l~~~~~~~~ 177 (274)
T PRK07775 153 RPHMGAYGAAKAGLEAMVTNLQMEL 177 (274)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHh
Confidence 2333345565555556667777665
No 345
>PRK06123 short chain dehydrogenase; Provisional
Probab=97.31 E-value=0.012 Score=51.09 Aligned_cols=146 Identities=15% Similarity=0.088 Sum_probs=77.5
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCCh--h-HHHHhhccccCcc-ee-eeeccCCHHHHh-------CCC
Q 024248 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--G-VTADISHMDTNAV-VR-GFLGQQQLEDAL-------TGM 115 (270)
Q Consensus 48 KI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~--~-~~~dl~~~~~~~~-~~-~i~~t~d~~~al-------~~A 115 (270)
.++|+|++|++|+.++..|+.+|. .|++.+..... . ...++........ +. .+....++++++ ...
T Consensus 4 ~~lVtG~~~~iG~~~a~~l~~~G~--~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06123 4 VMIITGASRGIGAATALLAAERGY--AVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL 81 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCC--eEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 589999999999999999999998 78887754321 1 1112221111110 00 011111222332 367
Q ss_pred CEEEEcCCCCCCCC----Cc---hhhhHHhhHHHHHHHHHHHhHhC------CCCEEEEecCCCCCcHHHHHHHHHHhCC
Q 024248 116 DIVIIPAGVPRKPG----MT---RDDLFNINAGIVKTLCEGIAKCC------PKAIVNLISNPVNSTVPIAAEVFKKVGT 182 (270)
Q Consensus 116 DvVIi~ag~~~~~g----~~---r~~~~~~N~~i~~~i~~~i~~~~------p~a~viv~sNPv~~~~~i~t~~~~~~sg 182 (270)
|+||+++|...... .+ -...+..|+.....+.+.+.+.. .++.++++|..... .+
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~------------~~ 149 (248)
T PRK06123 82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAAR------------LG 149 (248)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhc------------CC
Confidence 99999998643211 11 12345677766555554443321 13456666653321 01
Q ss_pred CCCCC-eeeechhhHHHHHHHHHHHh
Q 024248 183 YDPKR-LLGVTMLDVVRANTFVAEVL 207 (270)
Q Consensus 183 ~p~~k-viG~t~ldt~r~~~~lA~~l 207 (270)
.|... .++.++.....+.+.+++.+
T Consensus 150 ~~~~~~~Y~~sKaa~~~~~~~la~~~ 175 (248)
T PRK06123 150 SPGEYIDYAASKGAIDTMTIGLAKEV 175 (248)
T ss_pred CCCCccchHHHHHHHHHHHHHHHHHh
Confidence 22111 25665555556777788876
No 346
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.30 E-value=0.0056 Score=58.65 Aligned_cols=117 Identities=21% Similarity=0.237 Sum_probs=68.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCccee-eeeccCCHHHH-------hCCCCE
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVR-GFLGQQQLEDA-------LTGMDI 117 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~-~i~~t~d~~~a-------l~~ADv 117 (270)
..++.|+|++|.+|..++..|+.+|. +|+++|+........++........+. .+....+.++. ....|+
T Consensus 210 g~~vlItGasggIG~~la~~l~~~Ga--~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~ 287 (450)
T PRK08261 210 GKVALVTGAARGIGAAIAEVLARDGA--HVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDI 287 (450)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCC--EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence 35799999999999999999999998 999999854322122221110000010 01111111111 235899
Q ss_pred EEEcCCCCCCCC---Cc---hhhhHHhhHHHHHHHHHHHhHh---CCCCEEEEecC
Q 024248 118 VIIPAGVPRKPG---MT---RDDLFNINAGIVKTLCEGIAKC---CPKAIVNLISN 164 (270)
Q Consensus 118 VIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~sN 164 (270)
||+++|...... .+ ....+..|+.....+.+.+... .+.+.|+++|.
T Consensus 288 vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS 343 (450)
T PRK08261 288 VVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSS 343 (450)
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECC
Confidence 999998653211 11 2234567777777777777652 23466776664
No 347
>PTZ00431 pyrroline carboxylate reductase; Provisional
Probab=97.29 E-value=0.0022 Score=57.33 Aligned_cols=90 Identities=14% Similarity=0.201 Sum_probs=57.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCc--cEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLV--SVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~--~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
.|||+|||+ |.+|++++..|...+.. .+++.+|+++.. + . . ....+..++++++|+||++.
T Consensus 3 ~mkI~iIG~-G~mG~ai~~~l~~~~~~~~~~i~~~~~~~~~-----~-~------~---~~~~~~~~~~~~~D~Vilav- 65 (260)
T PTZ00431 3 NIRVGFIGL-GKMGSALAYGIENSNIIGKENIYYHTPSKKN-----T-P------F---VYLQSNEELAKTCDIIVLAV- 65 (260)
T ss_pred CCEEEEECc-cHHHHHHHHHHHhCCCCCcceEEEECCChhc-----C-C------e---EEeCChHHHHHhCCEEEEEe-
Confidence 489999997 99999999999887743 258888876432 0 0 0 11235557788999999985
Q ss_pred CCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCC
Q 024248 124 VPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVN 167 (270)
Q Consensus 124 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~ 167 (270)
+ ...+.++++.+..+-++..+|.+.+-+.
T Consensus 66 -k--------------p~~~~~vl~~i~~~l~~~~iIS~~aGi~ 94 (260)
T PTZ00431 66 -K--------------PDLAGKVLLEIKPYLGSKLLISICGGLN 94 (260)
T ss_pred -C--------------HHHHHHHHHHHHhhccCCEEEEEeCCcc
Confidence 1 1223455555654333344555555554
No 348
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=97.29 E-value=0.0041 Score=56.44 Aligned_cols=65 Identities=22% Similarity=0.274 Sum_probs=44.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhH---H--HHhhccccCcceeeeeccCCH-HHHhCCCCEEE
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV---T--ADISHMDTNAVVRGFLGQQQL-EDALTGMDIVI 119 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~---~--~dl~~~~~~~~~~~i~~t~d~-~~al~~ADvVI 119 (270)
.++|+|+|. |.+|..++..+...|+ .+.+++++...+. + +++.+. .+.+. .++.++||+||
T Consensus 3 ~~~v~IvG~-GliG~s~a~~l~~~g~--~v~i~g~d~~~~~~~~a~~lgv~d~----------~~~~~~~~~~~~aD~Vi 69 (279)
T COG0287 3 SMKVGIVGL-GLMGGSLARALKEAGL--VVRIIGRDRSAATLKAALELGVIDE----------LTVAGLAEAAAEADLVI 69 (279)
T ss_pred CcEEEEECC-chHHHHHHHHHHHcCC--eEEEEeecCcHHHHHHHhhcCcccc----------cccchhhhhcccCCEEE
Confidence 468999997 9999999999999999 6666666543221 1 122221 11222 46788999999
Q ss_pred EcCC
Q 024248 120 IPAG 123 (270)
Q Consensus 120 i~ag 123 (270)
+++.
T Consensus 70 vavP 73 (279)
T COG0287 70 VAVP 73 (279)
T ss_pred Eecc
Confidence 9973
No 349
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=97.29 E-value=0.0031 Score=54.34 Aligned_cols=36 Identities=28% Similarity=0.361 Sum_probs=32.2
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVV 81 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~ 81 (270)
.+..||+|+|+ |-+|+.++..|+..|. ++|+++|.+
T Consensus 19 L~~~~V~IvG~-GglGs~ia~~La~~Gv-g~i~lvD~D 54 (200)
T TIGR02354 19 LEQATVAICGL-GGLGSNVAINLARAGI-GKLILVDFD 54 (200)
T ss_pred HhCCcEEEECc-CHHHHHHHHHHHHcCC-CEEEEECCC
Confidence 44568999998 9999999999999997 589999998
No 350
>PRK07904 short chain dehydrogenase; Provisional
Probab=97.28 E-value=0.01 Score=52.44 Aligned_cols=116 Identities=16% Similarity=0.164 Sum_probs=64.9
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCC-CccEEEEEeCCCCh-h--HHHHhhccccCcceee----eeccCCH----HHHh
Q 024248 45 PGFKVAVLGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTP-G--VTADISHMDTNAVVRG----FLGQQQL----EDAL 112 (270)
Q Consensus 45 ~~mKI~IIGa~G~VGs~la~~l~~~g-~~~eV~LvD~~~~~-~--~~~dl~~~~~~~~~~~----i~~t~d~----~~al 112 (270)
++++|.|+||+|.+|..++..|+.+| . .|+++++++.. . ...++.... ...+.. +....+. +++.
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~--~V~~~~r~~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~ 83 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPA--RVVLAALPDDPRRDAAVAQMKAAG-ASSVEVIDFDALDTDSHPKVIDAAF 83 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCC--eEEEEeCCcchhHHHHHHHHHhcC-CCceEEEEecCCChHHHHHHHHHHH
Confidence 34589999999999999999998885 6 99999987642 1 122333211 001111 1111122 1222
Q ss_pred --CCCCEEEEcCCCCCCCCCc---h---hhhHHhhHHHH----HHHHHHHhHhCCCCEEEEecC
Q 024248 113 --TGMDIVIIPAGVPRKPGMT---R---DDLFNINAGIV----KTLCEGIAKCCPKAIVNLISN 164 (270)
Q Consensus 113 --~~ADvVIi~ag~~~~~g~~---r---~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~sN 164 (270)
.+.|++|.++|........ . .+.+..|+... +.+.+.+.+.. .+.++++|.
T Consensus 84 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~-~~~iv~isS 146 (253)
T PRK07904 84 AGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG-FGQIIAMSS 146 (253)
T ss_pred hcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC-CceEEEEec
Confidence 3799999988765321111 1 12356665433 45666666543 355555553
No 351
>PRK05479 ketol-acid reductoisomerase; Provisional
Probab=97.27 E-value=0.0032 Score=58.44 Aligned_cols=68 Identities=18% Similarity=0.149 Sum_probs=48.7
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcC
Q 024248 43 GSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (270)
Q Consensus 43 ~~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~a 122 (270)
..+.+||+|||. |.+|.+++..|...|+ +|+..++...... +...... + . ..+.+++++.||+|+++.
T Consensus 14 ~L~gktIgIIG~-GsmG~AlA~~L~~sG~--~Vvv~~r~~~~s~--~~A~~~G---~---~-~~s~~eaa~~ADVVvLaV 81 (330)
T PRK05479 14 LIKGKKVAIIGY-GSQGHAHALNLRDSGV--DVVVGLREGSKSW--KKAEADG---F---E-VLTVAEAAKWADVIMILL 81 (330)
T ss_pred hhCCCEEEEEee-HHHHHHHHHHHHHCCC--EEEEEECCchhhH--HHHHHCC---C---e-eCCHHHHHhcCCEEEEcC
Confidence 345679999998 9999999999999998 8888877543211 1111110 1 1 126778999999999986
No 352
>PRK06114 short chain dehydrogenase; Provisional
Probab=97.26 E-value=0.0085 Score=52.59 Aligned_cols=34 Identities=29% Similarity=0.368 Sum_probs=31.2
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~ 82 (270)
+++.|+|++|.+|..++..|++.|. +|++.|++.
T Consensus 9 k~~lVtG~s~gIG~~ia~~l~~~G~--~v~~~~r~~ 42 (254)
T PRK06114 9 QVAFVTGAGSGIGQRIAIGLAQAGA--DVALFDLRT 42 (254)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCc
Confidence 4799999999999999999999998 999999865
No 353
>PRK08017 oxidoreductase; Provisional
Probab=97.26 E-value=0.01 Score=51.84 Aligned_cols=33 Identities=21% Similarity=0.184 Sum_probs=30.6
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCC
Q 024248 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (270)
Q Consensus 48 KI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~ 82 (270)
+|.|+||+|++|..++..|+++|. +|++++++.
T Consensus 4 ~vlVtGasg~IG~~la~~l~~~g~--~v~~~~r~~ 36 (256)
T PRK08017 4 SVLITGCSSGIGLEAALELKRRGY--RVLAACRKP 36 (256)
T ss_pred EEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 799999999999999999999998 899999875
No 354
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.25 E-value=0.0017 Score=59.30 Aligned_cols=57 Identities=21% Similarity=0.331 Sum_probs=47.6
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
....+|+|||.+|.||..++..|...|. .|+++++. |.++++.++.||+||.+.|
T Consensus 157 l~Gk~V~vIG~s~ivG~PmA~~L~~~ga--tVtv~~~~-----------------------t~~l~e~~~~ADIVIsavg 211 (301)
T PRK14194 157 LTGKHAVVIGRSNIVGKPMAALLLQAHC--SVTVVHSR-----------------------STDAKALCRQADIVVAAVG 211 (301)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCC--EEEEECCC-----------------------CCCHHHHHhcCCEEEEecC
Confidence 4467999999967999999999999998 99999753 1256788899999999987
Q ss_pred CC
Q 024248 124 VP 125 (270)
Q Consensus 124 ~~ 125 (270)
.+
T Consensus 212 ~~ 213 (301)
T PRK14194 212 RP 213 (301)
T ss_pred Ch
Confidence 65
No 355
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.25 E-value=0.0014 Score=52.89 Aligned_cols=77 Identities=21% Similarity=0.265 Sum_probs=51.8
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
.+..|++|+|+ |-+|..++..|...|. ++|++++++..++ .+|........+.. ...+++.+.+..+|+||.+.+
T Consensus 10 l~~~~vlviGa-Gg~ar~v~~~L~~~g~-~~i~i~nRt~~ra--~~l~~~~~~~~~~~-~~~~~~~~~~~~~DivI~aT~ 84 (135)
T PF01488_consen 10 LKGKRVLVIGA-GGAARAVAAALAALGA-KEITIVNRTPERA--EALAEEFGGVNIEA-IPLEDLEEALQEADIVINATP 84 (135)
T ss_dssp GTTSEEEEESS-SHHHHHHHHHHHHTTS-SEEEEEESSHHHH--HHHHHHHTGCSEEE-EEGGGHCHHHHTESEEEE-SS
T ss_pred cCCCEEEEECC-HHHHHHHHHHHHHcCC-CEEEEEECCHHHH--HHHHHHcCccccce-eeHHHHHHHHhhCCeEEEecC
Confidence 34569999998 9999999999999987 4799999975432 22222111111221 223466677899999999976
Q ss_pred CC
Q 024248 124 VP 125 (270)
Q Consensus 124 ~~ 125 (270)
.+
T Consensus 85 ~~ 86 (135)
T PF01488_consen 85 SG 86 (135)
T ss_dssp TT
T ss_pred CC
Confidence 55
No 356
>KOG2305 consensus 3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]
Probab=97.24 E-value=0.00077 Score=59.01 Aligned_cols=105 Identities=19% Similarity=0.270 Sum_probs=68.6
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCCh------hH---HHHhhcccc-C------cceeeeeccCCHHH
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP------GV---TADISHMDT-N------AVVRGFLGQQQLED 110 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~------~~---~~dl~~~~~-~------~~~~~i~~t~d~~~ 110 (270)
-||+|+|. |.+|+..|.+++..|+ +|.|||+.+.. .. ..+|..... . .-+..+++|++++|
T Consensus 4 ~ki~ivgS-gl~g~~WAmlFAs~Gy--qVqlYDI~e~Ql~~ALen~~Kel~~Lee~g~lrGnlsa~eqla~is~t~~l~E 80 (313)
T KOG2305|consen 4 GKIAIVGS-GLVGSSWAMLFASSGY--QVQLYDILEKQLQTALENVEKELRKLEEHGLLRGNLSADEQLALISGTTSLNE 80 (313)
T ss_pred cceeEeec-ccccchHHHHHhccCc--eEEEeeccHHHHHHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhCCccHHH
Confidence 48999995 9999999999999999 99999997631 11 112222111 1 11223577889999
Q ss_pred HhCCCCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhC-CCCEEEEecCCCCCcH
Q 024248 111 ALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTV 170 (270)
Q Consensus 111 al~~ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~sNPv~~~~ 170 (270)
.+++|=.|=.|+ .+.+...+++.+++.+.. |.. |..|..+..+.
T Consensus 81 ~vk~Ai~iQEcv--------------pE~L~lkk~ly~qlD~i~d~~t--IlaSSTSt~mp 125 (313)
T KOG2305|consen 81 LVKGAIHIQECV--------------PEDLNLKKQLYKQLDEIADPTT--ILASSTSTFMP 125 (313)
T ss_pred HHhhhhhHHhhc--------------hHhhHHHHHHHHHHHHhcCCce--EEeccccccCh
Confidence 999985443332 334566788888888876 443 33555555443
No 357
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=97.24 E-value=0.0094 Score=51.83 Aligned_cols=32 Identities=25% Similarity=0.293 Sum_probs=28.3
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDV 80 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~ 80 (270)
++|.|+||+|.+|..++..|+.+|. +|++.+.
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~--~v~~~~~ 34 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGW--SVGINYA 34 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCC--EEEEEeC
Confidence 4799999999999999999999998 8877654
No 358
>PLN03139 formate dehydrogenase; Provisional
Probab=97.24 E-value=0.0039 Score=59.09 Aligned_cols=95 Identities=23% Similarity=0.222 Sum_probs=61.2
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
...++|+|+|. |.||..++..|...|+ +|..+|+........ .... +....++++.++.||+|+++..
T Consensus 197 L~gktVGIVG~-G~IG~~vA~~L~afG~--~V~~~d~~~~~~~~~--~~~g-------~~~~~~l~ell~~sDvV~l~lP 264 (386)
T PLN03139 197 LEGKTVGTVGA-GRIGRLLLQRLKPFNC--NLLYHDRLKMDPELE--KETG-------AKFEEDLDAMLPKCDVVVINTP 264 (386)
T ss_pred CCCCEEEEEee-cHHHHHHHHHHHHCCC--EEEEECCCCcchhhH--hhcC-------ceecCCHHHHHhhCCEEEEeCC
Confidence 45679999997 9999999999998888 999999864211111 1110 0112478889999999999863
Q ss_pred CCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEec
Q 024248 124 VPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163 (270)
Q Consensus 124 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~s 163 (270)
.. .+-..++ | .+ .+....|++++|+++
T Consensus 265 lt----~~T~~li--~----~~---~l~~mk~ga~lIN~a 291 (386)
T PLN03139 265 LT----EKTRGMF--N----KE---RIAKMKKGVLIVNNA 291 (386)
T ss_pred CC----HHHHHHh--C----HH---HHhhCCCCeEEEECC
Confidence 21 1111111 1 22 333334788999886
No 359
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=97.22 E-value=0.0054 Score=53.03 Aligned_cols=34 Identities=21% Similarity=0.113 Sum_probs=31.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~ 82 (270)
.++.|+|++|.+|..++..|+++|. .|++.+++.
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~--~vi~~~r~~ 36 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGY--RVIATYFSG 36 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCC--EEEEEeCCc
Confidence 3789999999999999999999997 999999874
No 360
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=97.22 E-value=0.011 Score=51.24 Aligned_cols=31 Identities=19% Similarity=0.206 Sum_probs=27.4
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEe
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYD 79 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD 79 (270)
+.+.|+|++|.+|..++..|++.|. +|++..
T Consensus 4 k~~lVtG~s~giG~~~a~~l~~~G~--~vv~~~ 34 (246)
T PRK12938 4 RIAYVTGGMGGIGTSICQRLHKDGF--KVVAGC 34 (246)
T ss_pred CEEEEECCCChHHHHHHHHHHHcCC--EEEEEc
Confidence 3689999999999999999999998 887754
No 361
>PRK06484 short chain dehydrogenase; Validated
Probab=97.21 E-value=0.0075 Score=58.69 Aligned_cols=147 Identities=15% Similarity=0.160 Sum_probs=84.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhH--HHHhhccccCccee-eeeccCCHHHH-------hCCC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV--TADISHMDTNAVVR-GFLGQQQLEDA-------LTGM 115 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~--~~dl~~~~~~~~~~-~i~~t~d~~~a-------l~~A 115 (270)
.+++.|+||+|.+|..++..|+.+|. +|+++|++..... ..++... ...+. .+....++++. +...
T Consensus 269 ~k~~lItGas~gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~~D~~~~~~~~~~~~~~~~~~g~i 344 (520)
T PRK06484 269 PRVVAITGGARGIGRAVADRFAAAGD--RLLIIDRDAEGAKKLAEALGDE--HLSVQADITDEAAVESAFAQIQARWGRL 344 (520)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhCCc--eeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 35799999999999999999999998 9999998753211 1111100 00000 01111112222 2457
Q ss_pred CEEEEcCCCCCC--C--CCc---hhhhHHhhHHHHHHHHHHHhHhC-CCCEEEEecCCCCCcHHHHHHHHHHhCCCCCCC
Q 024248 116 DIVIIPAGVPRK--P--GMT---RDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKR 187 (270)
Q Consensus 116 DvVIi~ag~~~~--~--g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~sNPv~~~~~i~t~~~~~~sg~p~~k 187 (270)
|++|+++|.... + ..+ ....+..|+.....+.+.+..+- ..+.|+++|..... .+.|..-
T Consensus 345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~------------~~~~~~~ 412 (520)
T PRK06484 345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASL------------LALPPRN 412 (520)
T ss_pred CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhc------------CCCCCCc
Confidence 999999986421 1 111 23346677776666666655432 34677777654331 1234334
Q ss_pred eeeechhhHHHHHHHHHHHhC
Q 024248 188 LLGVTMLDVVRANTFVAEVLG 208 (270)
Q Consensus 188 viG~t~ldt~r~~~~lA~~l~ 208 (270)
.++.++..-..+-+.+++.++
T Consensus 413 ~Y~asKaal~~l~~~la~e~~ 433 (520)
T PRK06484 413 AYCASKAAVTMLSRSLACEWA 433 (520)
T ss_pred hhHHHHHHHHHHHHHHHHHhh
Confidence 466655555567777777764
No 362
>PRK09186 flagellin modification protein A; Provisional
Probab=97.21 E-value=0.0023 Score=55.89 Aligned_cols=36 Identities=22% Similarity=0.258 Sum_probs=32.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT 83 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~ 83 (270)
.++|.|+||+|.+|..++..|+..|+ +|++.+++..
T Consensus 4 ~k~vlItGas~giG~~~a~~l~~~g~--~v~~~~r~~~ 39 (256)
T PRK09186 4 GKTILITGAGGLIGSALVKAILEAGG--IVIAADIDKE 39 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEecChH
Confidence 45899999999999999999999998 9999988753
No 363
>PRK08324 short chain dehydrogenase; Validated
Probab=97.21 E-value=0.0077 Score=61.10 Aligned_cols=148 Identities=20% Similarity=0.188 Sum_probs=78.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCccee--eeeccCCHHHHh-------CC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAVVR--GFLGQQQLEDAL-------TG 114 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~~~--~i~~t~d~~~al-------~~ 114 (270)
.++|.|+||+|.+|..++..|+..|. +|+++|++.... ...++... ...... .+....++++++ .+
T Consensus 422 gk~vLVTGasggIG~~la~~L~~~Ga--~Vvl~~r~~~~~~~~~~~l~~~-~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~ 498 (681)
T PRK08324 422 GKVALVTGAAGGIGKATAKRLAAEGA--CVVLADLDEEAAEAAAAELGGP-DRALGVACDVTDEAAVQAAFEEAALAFGG 498 (681)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCcC--EEEEEeCCHHHHHHHHHHHhcc-CcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 35899999999999999999999998 999999975321 11122211 000000 011111122222 36
Q ss_pred CCEEEEcCCCCCCCC---Cc---hhhhHHhhHHHHHHHHHH----HhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCCC
Q 024248 115 MDIVIIPAGVPRKPG---MT---RDDLFNINAGIVKTLCEG----IAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYD 184 (270)
Q Consensus 115 ADvVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p 184 (270)
.|+||.++|...... .+ ....+..|+.....+++. +++....+.|+++|.-... .+.+
T Consensus 499 iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~------------~~~~ 566 (681)
T PRK08324 499 VDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAV------------NPGP 566 (681)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCcccc------------CCCC
Confidence 899999998643211 11 122345566555555444 4433223566666532221 0112
Q ss_pred CCCeeeechhhHHHHHHHHHHHhC
Q 024248 185 PKRLLGVTMLDVVRANTFVAEVLG 208 (270)
Q Consensus 185 ~~kviG~t~ldt~r~~~~lA~~l~ 208 (270)
..-.++.++.....+.+.++..++
T Consensus 567 ~~~~Y~asKaa~~~l~~~la~e~~ 590 (681)
T PRK08324 567 NFGAYGAAKAAELHLVRQLALELG 590 (681)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHhc
Confidence 222344444444456666776664
No 364
>PLN02712 arogenate dehydrogenase
Probab=97.21 E-value=0.0029 Score=64.06 Aligned_cols=67 Identities=18% Similarity=0.226 Sum_probs=48.0
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhC-CCCEEEEc
Q 024248 43 GSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALT-GMDIVIIP 121 (270)
Q Consensus 43 ~~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~-~ADvVIi~ 121 (270)
..++|||+|||. |.+|..++..|...|+ +|+.+|++.....+.++ . + ...+++++.++ .+|+||++
T Consensus 366 ~~~~~kIgIIGl-G~mG~slA~~L~~~G~--~V~~~dr~~~~~~a~~~--G-----v---~~~~~~~el~~~~aDvVILa 432 (667)
T PLN02712 366 DGSKLKIAIVGF-GNFGQFLAKTMVKQGH--TVLAYSRSDYSDEAQKL--G-----V---SYFSDADDLCEEHPEVILLC 432 (667)
T ss_pred CCCCCEEEEEec-CHHHHHHHHHHHHCcC--EEEEEECChHHHHHHHc--C-----C---eEeCCHHHHHhcCCCEEEEC
Confidence 456789999997 9999999999998887 99999987432111111 1 1 11346666665 59999998
Q ss_pred C
Q 024248 122 A 122 (270)
Q Consensus 122 a 122 (270)
.
T Consensus 433 v 433 (667)
T PLN02712 433 T 433 (667)
T ss_pred C
Confidence 6
No 365
>PRK06953 short chain dehydrogenase; Provisional
Probab=97.20 E-value=0.0037 Score=53.70 Aligned_cols=113 Identities=16% Similarity=0.178 Sum_probs=64.8
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHH---HhC--CCCEEEEcC
Q 024248 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLED---ALT--GMDIVIIPA 122 (270)
Q Consensus 48 KI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~---al~--~ADvVIi~a 122 (270)
++.|+|++|.+|..++..|+..|. +|+++|++.... .++...........+....++++ .+. ..|+||+++
T Consensus 3 ~vlvtG~sg~iG~~la~~L~~~G~--~v~~~~r~~~~~--~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~a 78 (222)
T PRK06953 3 TVLIVGASRGIGREFVRQYRADGW--RVIATARDAAAL--AALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYVA 78 (222)
T ss_pred eEEEEcCCCchhHHHHHHHHhCCC--EEEEEECCHHHH--HHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECC
Confidence 689999999999999999999998 999999875321 12221110000000111112222 133 479999998
Q ss_pred CCCCCC-----CCc---hhhhHHhhHHHHHHHHHHHhHhC--CCCEEEEecC
Q 024248 123 GVPRKP-----GMT---RDDLFNINAGIVKTLCEGIAKCC--PKAIVNLISN 164 (270)
Q Consensus 123 g~~~~~-----g~~---r~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~sN 164 (270)
|..... ..+ ....+..|+.....+++.+.++- ..+.+++++.
T Consensus 79 g~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS 130 (222)
T PRK06953 79 GVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSS 130 (222)
T ss_pred CcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcC
Confidence 864211 111 23346677777777776665432 2345555543
No 366
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=97.18 E-value=0.0012 Score=53.74 Aligned_cols=74 Identities=20% Similarity=0.297 Sum_probs=50.0
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhH--HHHhhccccCcceeeeeccCCHHHHhCCCCEEEEc
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV--TADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIP 121 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~--~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ 121 (270)
.+.++|+|+|+ |.+|..++..|...+ ..+|+++|++..... ..++... . +. ....+.++.++++|+||.+
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g-~~~v~v~~r~~~~~~~~~~~~~~~--~--~~--~~~~~~~~~~~~~Dvvi~~ 88 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELG-AAKIVIVNRTLEKAKALAERFGEL--G--IA--IAYLDLEELLAEADLIINT 88 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHhhc--c--cc--eeecchhhccccCCEEEeC
Confidence 44579999998 999999999998886 348999999754321 1222211 0 00 0123555668999999999
Q ss_pred CCCC
Q 024248 122 AGVP 125 (270)
Q Consensus 122 ag~~ 125 (270)
....
T Consensus 89 ~~~~ 92 (155)
T cd01065 89 TPVG 92 (155)
T ss_pred cCCC
Confidence 8654
No 367
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=97.17 E-value=0.011 Score=51.10 Aligned_cols=114 Identities=15% Similarity=0.142 Sum_probs=62.5
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC-h--hHHHHhhccccCcceee----eeccCCHHHH-------hCC
Q 024248 49 VAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-P--GVTADISHMDTNAVVRG----FLGQQQLEDA-------LTG 114 (270)
Q Consensus 49 I~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~-~--~~~~dl~~~~~~~~~~~----i~~t~d~~~a-------l~~ 114 (270)
|.|+||+|++|..++..|+++|. +|+++++... . ....++.+.. ..+.. +....+++++ ...
T Consensus 1 vlItGas~giG~~~a~~l~~~G~--~v~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 76 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGF--EICVHYHSGRSDAESVVSAIQAQG--GNARLLQFDVADRVACRTLLEADIAEHGA 76 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHHcC--CeEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 57999999999999999999998 8988876532 1 1112232211 11111 1111112222 234
Q ss_pred CCEEEEcCCCCCCCC---C---chhhhHHhhHHHHHHHHHHH----hHhCCCCEEEEecCCC
Q 024248 115 MDIVIIPAGVPRKPG---M---TRDDLFNINAGIVKTLCEGI----AKCCPKAIVNLISNPV 166 (270)
Q Consensus 115 ADvVIi~ag~~~~~g---~---~r~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~sNPv 166 (270)
.|.+|.++|...... . +....+..|+.....+.+.+ .+..+.+.++++|...
T Consensus 77 i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~ 138 (239)
T TIGR01831 77 YYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVS 138 (239)
T ss_pred CCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchh
Confidence 689999988643211 1 12335667766655555543 1223445666666543
No 368
>KOG0409 consensus Predicted dehydrogenase [General function prediction only]
Probab=97.17 E-value=0.0036 Score=56.93 Aligned_cols=96 Identities=16% Similarity=0.288 Sum_probs=65.6
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCCCC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVP 125 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag~~ 125 (270)
.++|.-||- |.+|++++..|+..|+ .|+.||++.. ...+|.+... .+ ..++.|..+++|+||...+.+
T Consensus 35 ~~~iGFIGL-G~MG~~M~~nLik~G~--kVtV~dr~~~--k~~~f~~~Ga--~v-----~~sPaeVae~sDvvitmv~~~ 102 (327)
T KOG0409|consen 35 KTRIGFIGL-GNMGSAMVSNLIKAGY--KVTVYDRTKD--KCKEFQEAGA--RV-----ANSPAEVAEDSDVVITMVPNP 102 (327)
T ss_pred cceeeEEee-ccchHHHHHHHHHcCC--EEEEEeCcHH--HHHHHHHhch--hh-----hCCHHHHHhhcCEEEEEcCCh
Confidence 568999997 9999999999999999 9999999743 3344554421 11 235678889999999987644
Q ss_pred CC----------------CCCch-hhhHHhhHHHHHHHHHHHhHh
Q 024248 126 RK----------------PGMTR-DDLFNINAGIVKTLCEGIAKC 153 (270)
Q Consensus 126 ~~----------------~g~~r-~~~~~~N~~i~~~i~~~i~~~ 153 (270)
.. ++..- .|.-...-...+++.+.++..
T Consensus 103 ~~v~~v~~g~~Gvl~g~~~g~~~~vDmSTidp~~s~ei~~~i~~~ 147 (327)
T KOG0409|consen 103 KDVKDVLLGKSGVLSGIRPGKKATVDMSTIDPDTSLEIAKAISNK 147 (327)
T ss_pred HhhHHHhcCCCcceeeccCCCceEEeccccCHHHHHHHHHHHHhC
Confidence 11 11111 122233345678888888753
No 369
>PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional
Probab=97.15 E-value=0.0091 Score=60.98 Aligned_cols=93 Identities=19% Similarity=0.249 Sum_probs=60.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCCCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPR 126 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag~~~ 126 (270)
.||+|||+ |.+|..++..+...|+..+|+++|+++..... ....... . ...++++++++++|+||++...
T Consensus 4 ~~I~IIG~-G~mG~ala~~l~~~G~~~~V~~~d~~~~~~~~--a~~~g~~--~---~~~~~~~~~~~~aDvVilavp~-- 73 (735)
T PRK14806 4 GRVVVIGL-GLIGGSFAKALRERGLAREVVAVDRRAKSLEL--AVSLGVI--D---RGEEDLAEAVSGADVIVLAVPV-- 73 (735)
T ss_pred cEEEEEee-CHHHHHHHHHHHhcCCCCEEEEEECChhHHHH--HHHCCCC--C---cccCCHHHHhcCCCEEEECCCH--
Confidence 58999997 99999999999988854489999997643211 1111100 0 1234677889999999998631
Q ss_pred CCCCchhhhHHhhHHHHHHHHHHHhHhC-CCCEEEEec
Q 024248 127 KPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLIS 163 (270)
Q Consensus 127 ~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~s 163 (270)
..+.++++.+.++. ++.+|+.++
T Consensus 74 --------------~~~~~vl~~l~~~~~~~~ii~d~~ 97 (735)
T PRK14806 74 --------------LAMEKVLADLKPLLSEHAIVTDVG 97 (735)
T ss_pred --------------HHHHHHHHHHHHhcCCCcEEEEcC
Confidence 12345555565543 455555444
No 370
>PLN02350 phosphogluconate dehydrogenase (decarboxylating)
Probab=97.14 E-value=0.0033 Score=61.41 Aligned_cols=72 Identities=17% Similarity=0.174 Sum_probs=48.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCC---CCEEEEcC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTG---MDIVIIPA 122 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~---ADvVIi~a 122 (270)
.++|++||. |.+|+.+|..|+..|+ +|+++|+..++. .++.+.........+....+++++++. +|+||++.
T Consensus 6 ~~~IG~IGL-G~MG~~mA~nL~~~G~--~V~V~NRt~~k~--~~l~~~~~~~Ga~~~~~a~s~~e~v~~l~~~dvIi~~v 80 (493)
T PLN02350 6 LSRIGLAGL-AVMGQNLALNIAEKGF--PISVYNRTTSKV--DETVERAKKEGNLPLYGFKDPEDFVLSIQKPRSVIILV 80 (493)
T ss_pred CCCEEEEee-HHHHHHHHHHHHhCCC--eEEEECCCHHHH--HHHHHhhhhcCCcccccCCCHHHHHhcCCCCCEEEEEC
Confidence 358999997 9999999999999999 999999975432 223221000000001123456666654 99999986
No 371
>PRK05872 short chain dehydrogenase; Provisional
Probab=97.13 E-value=0.006 Score=55.18 Aligned_cols=117 Identities=22% Similarity=0.248 Sum_probs=65.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCcce-eeeeccCCHHH-------HhCCC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAVV-RGFLGQQQLED-------ALTGM 115 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~~-~~i~~t~d~~~-------al~~A 115 (270)
..++.|+||+|.+|..++..|+..|. +|++++++.... ...++........+ -.+....+.++ .+...
T Consensus 9 gk~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 86 (296)
T PRK05872 9 GKVVVVTGAARGIGAELARRLHARGA--KLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGI 86 (296)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 34799999999999999999999998 999999875321 11222211000000 00111111111 23468
Q ss_pred CEEEEcCCCCCCC---CCc---hhhhHHhhHHHHHHHHHHHhHhC--CCCEEEEecC
Q 024248 116 DIVIIPAGVPRKP---GMT---RDDLFNINAGIVKTLCEGIAKCC--PKAIVNLISN 164 (270)
Q Consensus 116 DvVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~sN 164 (270)
|+||.++|..... ..+ -...+..|+.....+++.+.... ..+.|+++|.
T Consensus 87 d~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS 143 (296)
T PRK05872 87 DVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSS 143 (296)
T ss_pred CEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeC
Confidence 9999999864311 111 12345567666655555554321 2456666653
No 372
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=97.09 E-value=0.0012 Score=57.98 Aligned_cols=74 Identities=16% Similarity=0.175 Sum_probs=51.2
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVP 125 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag~~ 125 (270)
|+|+|+||||++|++++..|+.+++ +|+..-++........ .........+.....+..+++|.|.++++.+..
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~--~v~~~~r~~~~~~~~~---~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~ 74 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGH--EVRAAVRNPEAAAALA---GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLL 74 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCC--EEEEEEeCHHHHHhhc---CCcEEEEeccCCHhHHHHHhccccEEEEEeccc
Confidence 6899999999999999999999988 8888887654322222 111111111233445777889999999887543
No 373
>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating. This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason.
Probab=97.08 E-value=0.0036 Score=60.80 Aligned_cols=95 Identities=14% Similarity=0.191 Sum_probs=58.4
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhcc-ccCcceeeeeccCCHHH---HhCCCCEEEEcCC
Q 024248 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM-DTNAVVRGFLGQQQLED---ALTGMDIVIIPAG 123 (270)
Q Consensus 48 KI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~-~~~~~~~~i~~t~d~~~---al~~ADvVIi~ag 123 (270)
+|+|||. |.+|.++|..|+..|+ +|+++|+++... .++... .....+ ....++++ .++.+|+||+++.
T Consensus 1 ~IG~IGL-G~MG~~mA~nL~~~G~--~V~v~drt~~~~--~~l~~~~~~g~~~---~~~~s~~e~v~~l~~~dvIil~v~ 72 (467)
T TIGR00873 1 DIGVIGL-AVMGSNLALNMADHGF--TVSVYNRTPEKT--DEFLAEHAKGKKI---VGAYSIEEFVQSLERPRKIMLMVK 72 (467)
T ss_pred CEEEEee-HHHHHHHHHHHHhcCC--eEEEEeCCHHHH--HHHHhhccCCCCc---eecCCHHHHHhhcCCCCEEEEECC
Confidence 4899997 9999999999999999 999999975432 223221 000011 11223444 4467999999862
Q ss_pred CCCCCCCchhhhHHhhHHHHHHHHHHHhHh-CCCCEEEEecCC
Q 024248 124 VPRKPGMTRDDLFNINAGIVKTLCEGIAKC-CPKAIVNLISNP 165 (270)
Q Consensus 124 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~sNP 165 (270)
.+ +.+.++++.+..+ .++.+||-.||-
T Consensus 73 ~~---------------~~v~~Vi~~l~~~L~~g~iIID~gns 100 (467)
T TIGR00873 73 AG---------------APVDAVINQLLPLLEKGDIIIDGGNS 100 (467)
T ss_pred Cc---------------HHHHHHHHHHHhhCCCCCEEEECCCc
Confidence 21 1123344444443 356777777764
No 374
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=97.07 E-value=0.023 Score=48.96 Aligned_cols=31 Identities=19% Similarity=0.220 Sum_probs=28.4
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEeC
Q 024248 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDV 80 (270)
Q Consensus 48 KI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~ 80 (270)
.+.|+|++|.+|..++..|+..|. +|+++.+
T Consensus 2 ~~lItG~sg~iG~~la~~l~~~G~--~v~~~~r 32 (242)
T TIGR01829 2 IALVTGGMGGIGTAICQRLAKDGY--RVAANCG 32 (242)
T ss_pred EEEEECCCChHHHHHHHHHHHCCC--EEEEEeC
Confidence 578999999999999999999998 8888877
No 375
>PRK07677 short chain dehydrogenase; Provisional
Probab=97.07 E-value=0.0064 Score=53.24 Aligned_cols=146 Identities=12% Similarity=0.055 Sum_probs=79.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCcceee----eeccCCHHHH-------hC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAVVRG----FLGQQQLEDA-------LT 113 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~~~~----i~~t~d~~~a-------l~ 113 (270)
+++.|+|++|.+|..++..|++.|. .|+++|++.... ...++.... ..+.. +....++++. +.
T Consensus 2 k~~lItG~s~giG~~ia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 77 (252)
T PRK07677 2 KVVIITGGSSGMGKAMAKRFAEEGA--NVVITGRTKEKLEEAKLEIEQFP--GQVLTVQMDVRNPEDVQKMVEQIDEKFG 77 (252)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 4789999999999999999999998 999999875321 112222111 11111 1111112221 24
Q ss_pred CCCEEEEcCCCCCC-C--CCch---hhhHHhhHHHHHHHHHHHhH----hCCCCEEEEecCCCCCcHHHHHHHHHHhCCC
Q 024248 114 GMDIVIIPAGVPRK-P--GMTR---DDLFNINAGIVKTLCEGIAK----CCPKAIVNLISNPVNSTVPIAAEVFKKVGTY 183 (270)
Q Consensus 114 ~ADvVIi~ag~~~~-~--g~~r---~~~~~~N~~i~~~i~~~i~~----~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~ 183 (270)
..|++|.++|.... + ..+. ...+..|+.....+.+.+.+ ....+.++++|.-.. .. ..
T Consensus 78 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~-----------~~-~~ 145 (252)
T PRK07677 78 RIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYA-----------WD-AG 145 (252)
T ss_pred CccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhh-----------cc-CC
Confidence 67999999875321 1 1121 23456676655555555533 233466776663211 00 01
Q ss_pred CCCCeeeechhhHHHHHHHHHHHhC
Q 024248 184 DPKRLLGVTMLDVVRANTFVAEVLG 208 (270)
Q Consensus 184 p~~kviG~t~ldt~r~~~~lA~~l~ 208 (270)
+..-.++.++.....+-+.+|..+.
T Consensus 146 ~~~~~Y~~sKaa~~~~~~~la~e~~ 170 (252)
T PRK07677 146 PGVIHSAAAKAGVLAMTRTLAVEWG 170 (252)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHhC
Confidence 1111244544444556777777764
No 376
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=97.07 E-value=0.029 Score=49.62 Aligned_cols=32 Identities=25% Similarity=0.227 Sum_probs=28.7
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCC
Q 024248 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVV 81 (270)
Q Consensus 48 KI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~ 81 (270)
.+.|+||+|.+|..++..|+++|. +|++.+++
T Consensus 3 ~~lITGas~gIG~~~a~~l~~~G~--~V~~~~~~ 34 (267)
T TIGR02685 3 AAVVTGAAKRIGSSIAVALHQEGY--RVVLHYHR 34 (267)
T ss_pred EEEEeCCCCcHHHHHHHHHHhCCC--eEEEEcCC
Confidence 688999999999999999999998 89887654
No 377
>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase. This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).
Probab=97.07 E-value=0.0034 Score=56.86 Aligned_cols=61 Identities=18% Similarity=0.264 Sum_probs=45.4
Q ss_pred EEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 51 VLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 51 IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
+||. |.+|..++..|+..|+ +|+++|+++.. ..++.... ...+.++++++++||+||++..
T Consensus 1 ~IGl-G~mG~~mA~~L~~~G~--~V~v~dr~~~~--~~~l~~~g-------~~~~~s~~~~~~~advVil~vp 61 (288)
T TIGR01692 1 FIGL-GNMGGPMAANLLKAGH--PVRVFDLFPDA--VEEAVAAG-------AQAAASPAEAAEGADRVITMLP 61 (288)
T ss_pred CCcc-cHhHHHHHHHHHhCCC--eEEEEeCCHHH--HHHHHHcC-------CeecCCHHHHHhcCCEEEEeCC
Confidence 5797 9999999999999998 99999997542 22232211 1124467788999999999874
No 378
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=97.06 E-value=0.0032 Score=62.08 Aligned_cols=66 Identities=23% Similarity=0.320 Sum_probs=48.8
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
-..++|+|+|. |.+|..+|..|...|+ +|+.||+........++. .. .. ++++.++.||+|+++..
T Consensus 138 l~gktvgIiG~-G~IG~~vA~~l~~fG~--~V~~~d~~~~~~~~~~~g-------~~---~~-~l~ell~~aDiV~l~lP 203 (526)
T PRK13581 138 LYGKTLGIIGL-GRIGSEVAKRAKAFGM--KVIAYDPYISPERAAQLG-------VE---LV-SLDELLARADFITLHTP 203 (526)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEECCCCChhHHHhcC-------CE---EE-cHHHHHhhCCEEEEccC
Confidence 44568999998 9999999999998898 999999853322221111 11 12 57888999999999864
No 379
>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase. This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.
Probab=97.06 E-value=0.004 Score=61.36 Aligned_cols=67 Identities=22% Similarity=0.290 Sum_probs=49.1
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
...++|+|+|. |.+|..+|..|...|+ +|+.||+........++. . ...+++++.++.||+|+++..
T Consensus 136 l~gktvgIiG~-G~IG~~vA~~l~~fG~--~V~~~d~~~~~~~~~~~g-------~---~~~~~l~ell~~aDvV~l~lP 202 (525)
T TIGR01327 136 LYGKTLGVIGL-GRIGSIVAKRAKAFGM--KVLAYDPYISPERAEQLG-------V---ELVDDLDELLARADFITVHTP 202 (525)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEECCCCChhHHHhcC-------C---EEcCCHHHHHhhCCEEEEccC
Confidence 34568999997 9999999999998888 999999853222222211 0 112468889999999999863
No 380
>COG0345 ProC Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism]
Probab=97.05 E-value=0.012 Score=53.10 Aligned_cols=96 Identities=17% Similarity=0.258 Sum_probs=63.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCC-C-ccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINP-L-VSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGV 124 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g-~-~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag~ 124 (270)
|||++||+ |.+|..++..|...+ + ..+|...|++++... ++... ++.. .+++.++++..+|+||++.
T Consensus 2 ~~IgfIG~-G~Mg~Ai~~gl~~~g~~~~~~I~v~~~~~e~~~--~l~~~--~g~~----~~~~~~~~~~~advv~Lav-- 70 (266)
T COG0345 2 MKIGFIGA-GNMGEAILSGLLKSGALPPEEIIVTNRSEEKRA--ALAAE--YGVV----TTTDNQEAVEEADVVFLAV-- 70 (266)
T ss_pred ceEEEEcc-CHHHHHHHHHHHhcCCCCcceEEEeCCCHHHHH--HHHHH--cCCc----ccCcHHHHHhhCCEEEEEe--
Confidence 69999998 999999999999988 3 248888887654322 23221 1111 1456678889999999997
Q ss_pred CCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCC
Q 024248 125 PRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVN 167 (270)
Q Consensus 125 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~ 167 (270)
+| ..+.++++.++...++..||-+.-.+.
T Consensus 71 --KP------------q~~~~vl~~l~~~~~~~lvISiaAGv~ 99 (266)
T COG0345 71 --KP------------QDLEEVLSKLKPLTKDKLVISIAAGVS 99 (266)
T ss_pred --Ch------------HhHHHHHHHhhcccCCCEEEEEeCCCC
Confidence 22 224667777765345666655554444
No 381
>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]
Probab=97.04 E-value=0.0022 Score=54.22 Aligned_cols=118 Identities=22% Similarity=0.235 Sum_probs=78.6
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCCh-hHHHH-hhccccCcceeeeeccCCHHHHhCCCCEEEE
Q 024248 43 GSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTAD-ISHMDTNAVVRGFLGQQQLEDALTGMDIVII 120 (270)
Q Consensus 43 ~~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~-~~~~d-l~~~~~~~~~~~i~~t~d~~~al~~ADvVIi 120 (270)
.++.|...|+||+|..|+.+...+.+.+.++.|+++-+.+.. +..-+ +.+ ....+..-.++.+++++.|+.|.
T Consensus 15 ~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at~k~v~q-----~~vDf~Kl~~~a~~~qg~dV~Fc 89 (238)
T KOG4039|consen 15 RMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPATDKVVAQ-----VEVDFSKLSQLATNEQGPDVLFC 89 (238)
T ss_pred hhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccccceeee-----EEechHHHHHHHhhhcCCceEEE
Confidence 345667999999999999999999999999999999887521 10000 000 00011112356678899999999
Q ss_pred cCCCCC-CCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCC
Q 024248 121 PAGVPR-KPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVN 167 (270)
Q Consensus 121 ~ag~~~-~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~ 167 (270)
+-|+.+ +.|-+ .++...-+.+.+.++..++.+-+.++++.|--.|
T Consensus 90 aLgTTRgkaGad--gfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd 135 (238)
T KOG4039|consen 90 ALGTTRGKAGAD--GFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGAD 135 (238)
T ss_pred eecccccccccC--ceEeechHHHHHHHHHHHhCCCeEEEEEeccCCC
Confidence 988754 33322 2345556777888888887666677776664333
No 382
>TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein. This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown.
Probab=97.04 E-value=0.0068 Score=55.82 Aligned_cols=150 Identities=15% Similarity=0.131 Sum_probs=85.8
Q ss_pred CeEEEEcCCCc--------------------hHHHHHHHHHhCCCccEEEEEeCCCCh---hHHHHhhccccCcceeeee
Q 024248 47 FKVAVLGAAGG--------------------IGQPLAMLMKINPLVSVLHLYDVVNTP---GVTADISHMDTNAVVRGFL 103 (270)
Q Consensus 47 mKI~IIGa~G~--------------------VGs~la~~l~~~g~~~eV~LvD~~~~~---~~~~dl~~~~~~~~~~~i~ 103 (270)
|||.|.|+ |+ =|+.+|..|+..|+ +|+++|++... .....+.+... .
T Consensus 1 ~~~~~~g~-gnq~ly~~~~~~~~~~gg~~p~gGspMArnLlkAGh--eV~V~Drnrsa~e~e~~e~LaeaGA-------~ 70 (341)
T TIGR01724 1 MKVSVYGA-GNQKLYTDELNLPEKFGGEPPYGGSRMAIEFAMAGH--DVVLAEPNREFMSDDLWKKVEDAGV-------K 70 (341)
T ss_pred CeeEEecC-cchhHHHHHhCChhhcCCCCCCCHHHHHHHHHHCCC--EEEEEeCChhhhhhhhhHHHHHCCC-------e
Confidence 67888886 63 47889999999999 99999987531 12223433211 1
Q ss_pred ccCCHHHHhCCCCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhC-CCCEEEEecCCCCCcHHHHHHHHHH---
Q 024248 104 GQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKK--- 179 (270)
Q Consensus 104 ~t~d~~~al~~ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~sNPv~~~~~i~t~~~~~--- 179 (270)
..++..+++++||+||++...+ ..++++++.+.... ++.++|..| .++.. .+-+.+..
T Consensus 71 ~AaS~aEAAa~ADVVIL~LPd~---------------aaV~eVl~GLaa~L~~GaIVID~S-TIsP~--t~~~~~e~~l~ 132 (341)
T TIGR01724 71 VVSDDKEAAKHGEIHVLFTPFG---------------KGTFSIARTIIEHVPENAVICNTC-TVSPV--VLYYSLEKILR 132 (341)
T ss_pred ecCCHHHHHhCCCEEEEecCCH---------------HHHHHHHHHHHhcCCCCCEEEECC-CCCHH--HHHHHHHHHhh
Confidence 2346779999999999986321 22233334444444 455555554 22211 12233322
Q ss_pred h-------CCCCCC-------C---e------eee--chhhHHHHHHHHHHHhCCCCCccceEEEccCCC
Q 024248 180 V-------GTYDPK-------R---L------LGV--TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAG 224 (270)
Q Consensus 180 ~-------sg~p~~-------k---v------iG~--t~ldt~r~~~~lA~~l~v~~~~v~~~V~G~hg~ 224 (270)
. +.|.|. + + +|. ..-+...-...|++..+-.+..+-+.+++.-+|
T Consensus 133 ~~r~d~~v~s~HP~~vP~~~~~~~~~~~~~~~~~~~~A~ee~i~~~~el~~~~~~~~~~~pa~l~~~v~D 202 (341)
T TIGR01724 133 LKRTDVGISSMHPAAVPGTPQHGHYVIGGKPTAGKEMATEEQISKCVELAKSTGKKAYVVPADVTSAVAD 202 (341)
T ss_pred cCccccCeeccCCCCCCCCCCCceeeeccccccccccCCHHHHHHHHHHHHHhCCCeeecchhhcchhhh
Confidence 1 112111 1 1 111 223334456788888888888887788887776
No 383
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=97.02 E-value=0.0023 Score=54.47 Aligned_cols=77 Identities=19% Similarity=0.215 Sum_probs=48.9
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhH--HHHhhccccCcceeee--eccCCHHHHhCCCCEEEE
Q 024248 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV--TADISHMDTNAVVRGF--LGQQQLEDALTGMDIVII 120 (270)
Q Consensus 45 ~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~--~~dl~~~~~~~~~~~i--~~t~d~~~al~~ADvVIi 120 (270)
+.+|++|+|++|.+|..++..|+..+. +|++++++..+.. ..++.+. ....+... ....++.++++++|+||.
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~--~V~l~~R~~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~diVi~ 103 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGA--RVVLVGRDLERAQKAADSLRAR-FGEGVGAVETSDDAARAAAIKGADVVFA 103 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhh-cCCcEEEeeCCCHHHHHHHHhcCCEEEE
Confidence 446899999889999999999998886 9999998753221 1122211 01111111 111234577899999888
Q ss_pred cCCC
Q 024248 121 PAGV 124 (270)
Q Consensus 121 ~ag~ 124 (270)
+...
T Consensus 104 at~~ 107 (194)
T cd01078 104 AGAA 107 (194)
T ss_pred CCCC
Confidence 7543
No 384
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=97.01 E-value=0.002 Score=60.99 Aligned_cols=77 Identities=14% Similarity=0.152 Sum_probs=46.7
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhcccc-CcceeeeeccCCHHHHhCCCCEEEEcC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT-NAVVRGFLGQQQLEDALTGMDIVIIPA 122 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~-~~~~~~i~~t~d~~~al~~ADvVIi~a 122 (270)
.++|||+|+||+|++|..+..+|..++.+ +|+++..+...++.....+... ......+. ..+. +.++++|+||++.
T Consensus 36 ~~~~kVaIvGATG~vG~eLlrlL~~hP~~-el~~l~s~~saG~~i~~~~~~l~~~~~~~~~-~~~~-~~~~~~DvVf~Al 112 (381)
T PLN02968 36 EEKKRIFVLGASGYTGAEVRRLLANHPDF-EITVMTADRKAGQSFGSVFPHLITQDLPNLV-AVKD-ADFSDVDAVFCCL 112 (381)
T ss_pred ccccEEEEECCCChHHHHHHHHHHhCCCC-eEEEEEChhhcCCCchhhCccccCcccccee-cCCH-HHhcCCCEEEEcC
Confidence 45679999999999999999999888543 8888877543332211111000 00111011 1122 3368999999986
Q ss_pred C
Q 024248 123 G 123 (270)
Q Consensus 123 g 123 (270)
+
T Consensus 113 p 113 (381)
T PLN02968 113 P 113 (381)
T ss_pred C
Confidence 4
No 385
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=97.00 E-value=0.058 Score=47.48 Aligned_cols=34 Identities=15% Similarity=0.258 Sum_probs=29.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVV 81 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~ 81 (270)
.++|.|+||++.+|..++..|++.|. .|++.++.
T Consensus 8 ~k~vlItGas~gIG~~ia~~l~~~G~--~v~~~~~~ 41 (260)
T PRK08416 8 GKTLVISGGTRGIGKAIVYEFAQSGV--NIAFTYNS 41 (260)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCC
Confidence 35799999999999999999999998 88887653
No 386
>TIGR00465 ilvC ketol-acid reductoisomerase. This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway
Probab=97.00 E-value=0.0073 Score=55.72 Aligned_cols=66 Identities=17% Similarity=0.157 Sum_probs=45.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcC
Q 024248 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (270)
Q Consensus 45 ~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~a 122 (270)
+.+||+|||. |.+|.+++..|...|+ +|+.++...... ...+... .+ . ..+.++++++||+||++.
T Consensus 2 ~~kkIgiIG~-G~mG~AiA~~L~~sG~--~Viv~~~~~~~~-~~~a~~~----Gv---~-~~s~~ea~~~ADiVvLaV 67 (314)
T TIGR00465 2 KGKTVAIIGY-GSQGHAQALNLRDSGL--NVIVGLRKGGAS-WKKATED----GF---K-VGTVEEAIPQADLIMNLL 67 (314)
T ss_pred CcCEEEEEeE-cHHHHHHHHHHHHCCC--eEEEEECcChhh-HHHHHHC----CC---E-ECCHHHHHhcCCEEEEeC
Confidence 3468999997 9999999999999998 776665543211 1111111 11 1 124668889999999987
No 387
>PRK07201 short chain dehydrogenase; Provisional
Probab=97.00 E-value=0.011 Score=59.32 Aligned_cols=114 Identities=17% Similarity=0.170 Sum_probs=64.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCcceee----eeccCCHHHHh-------
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAVVRG----FLGQQQLEDAL------- 112 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~~~~----i~~t~d~~~al------- 112 (270)
.+++.|+||+|.+|..++..|+.+|. +|++++++.... ...++.... ..+.. +....++++++
T Consensus 371 ~k~vlItGas~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 446 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAEAGA--TVFLVARNGEALDELVAEIRAKG--GTAHAYTCDLTDSAAVDHTVKDILAEH 446 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 45799999999999999999999998 999999875321 112222111 11111 11111222333
Q ss_pred CCCCEEEEcCCCCCCCC----C----chhhhHHhhHHHHHHHHHH----HhHhCCCCEEEEecC
Q 024248 113 TGMDIVIIPAGVPRKPG----M----TRDDLFNINAGIVKTLCEG----IAKCCPKAIVNLISN 164 (270)
Q Consensus 113 ~~ADvVIi~ag~~~~~g----~----~r~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~sN 164 (270)
...|++|.++|...... . +....+..|+.....+.+. +++. ..+.|+++|.
T Consensus 447 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~isS 509 (657)
T PRK07201 447 GHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRER-RFGHVVNVSS 509 (657)
T ss_pred CCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-CCCEEEEECC
Confidence 36899999998642111 0 1123455666554444444 4432 3456666653
No 388
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=96.99 E-value=0.0062 Score=58.19 Aligned_cols=89 Identities=21% Similarity=0.149 Sum_probs=59.6
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh-HHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG-VTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 45 ~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~-~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
...+|+|+|+ |.+|..++..+...|. +|+.+|+++.+. .+..+ . . . ..+.+++++++|+||.+.|
T Consensus 201 ~GktVvViG~-G~IG~~va~~ak~~Ga--~ViV~d~d~~R~~~A~~~--G--~---~----~~~~~e~v~~aDVVI~atG 266 (413)
T cd00401 201 AGKVAVVAGY-GDVGKGCAQSLRGQGA--RVIVTEVDPICALQAAME--G--Y---E----VMTMEEAVKEGDIFVTTTG 266 (413)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEECChhhHHHHHhc--C--C---E----EccHHHHHcCCCEEEECCC
Confidence 4568999998 9999999999998898 899999976432 12111 1 0 0 1134678899999999875
Q ss_pred CCCCCCCchhhhHHhhHHHH-HHHHHHHhHhCCCCEEEEecCC
Q 024248 124 VPRKPGMTRDDLFNINAGIV-KTLCEGIAKCCPKAIVNLISNP 165 (270)
Q Consensus 124 ~~~~~g~~r~~~~~~N~~i~-~~i~~~i~~~~p~a~viv~sNP 165 (270)
.+ ..+ ...++. ..+.+++++++.+
T Consensus 267 ~~---------------~~i~~~~l~~---mk~GgilvnvG~~ 291 (413)
T cd00401 267 NK---------------DIITGEHFEQ---MKDGAIVCNIGHF 291 (413)
T ss_pred CH---------------HHHHHHHHhc---CCCCcEEEEeCCC
Confidence 32 111 112332 3477899898854
No 389
>PRK07062 short chain dehydrogenase; Provisional
Probab=96.99 E-value=0.058 Score=47.44 Aligned_cols=35 Identities=17% Similarity=0.154 Sum_probs=31.9
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT 83 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~ 83 (270)
..+.|+||+|.+|..++..|+.+|. +|++++++..
T Consensus 9 k~~lItGas~giG~~ia~~l~~~G~--~V~~~~r~~~ 43 (265)
T PRK07062 9 RVAVVTGGSSGIGLATVELLLEAGA--SVAICGRDEE 43 (265)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeCCHH
Confidence 4799999999999999999999998 9999999753
No 390
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=96.98 E-value=0.0026 Score=59.34 Aligned_cols=74 Identities=23% Similarity=0.313 Sum_probs=44.4
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEE-EEeCCCChhHHH-H-hhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLH-LYDVVNTPGVTA-D-ISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~-LvD~~~~~~~~~-d-l~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
|||+|+||+|++|..++..|...+.. +++ +++.+...++.. + ..+......+. +. ..+.++.+.++|+||++.+
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~-el~~l~~s~~sagk~~~~~~~~l~~~~~~~-~~-~~~~~~~~~~~DvVf~alP 77 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEV-EITYLVSSRESAGKPVSEVHPHLRGLVDLN-LE-PIDEEEIAEDADVVFLALP 77 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCc-eEEEEeccchhcCCChHHhCccccccCCce-ee-cCCHHHhhcCCCEEEECCC
Confidence 69999999999999999999877554 666 667654323211 1 11000000111 11 1244454468999999874
No 391
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=96.98 E-value=0.0043 Score=57.44 Aligned_cols=80 Identities=21% Similarity=0.296 Sum_probs=55.8
Q ss_pred ccccccccccccCCCCCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCH
Q 024248 29 ESSGLGRMDCRAKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQL 108 (270)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~ 108 (270)
..+.|++...+. ..-..++|+|||. |.||+.++..+..-|+ +|..||......... .+. .....++
T Consensus 126 ~~g~W~~~~~~g-~el~gkTvGIiG~-G~IG~~va~~l~afgm--~v~~~d~~~~~~~~~--~~~--------~~~~~~L 191 (324)
T COG0111 126 RRGEWDRKAFRG-TELAGKTVGIIGL-GRIGRAVAKRLKAFGM--KVIGYDPYSPRERAG--VDG--------VVGVDSL 191 (324)
T ss_pred HcCCcccccccc-ccccCCEEEEECC-CHHHHHHHHHHHhCCC--eEEEECCCCchhhhc--ccc--------ceecccH
Confidence 667788732221 1234569999998 9999999999999999 999999943221111 110 1123468
Q ss_pred HHHhCCCCEEEEcC
Q 024248 109 EDALTGMDIVIIPA 122 (270)
Q Consensus 109 ~~al~~ADvVIi~a 122 (270)
++-++.||+|++..
T Consensus 192 d~lL~~sDiv~lh~ 205 (324)
T COG0111 192 DELLAEADILTLHL 205 (324)
T ss_pred HHHHhhCCEEEEcC
Confidence 88899999999976
No 392
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=96.96 E-value=0.006 Score=55.73 Aligned_cols=68 Identities=19% Similarity=0.196 Sum_probs=48.5
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCCh-hHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~-~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~a 122 (270)
.+..||+|+|+ |.+|..++..|...|. +|+.+|++... ..+.++. .. .....++.+.++++|+||.++
T Consensus 150 l~g~kvlViG~-G~iG~~~a~~L~~~Ga--~V~v~~r~~~~~~~~~~~G-----~~---~~~~~~l~~~l~~aDiVI~t~ 218 (296)
T PRK08306 150 IHGSNVLVLGF-GRTGMTLARTLKALGA--NVTVGARKSAHLARITEMG-----LS---PFHLSELAEEVGKIDIIFNTI 218 (296)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHcC-----Ce---eecHHHHHHHhCCCCEEEECC
Confidence 34679999998 9999999999998887 99999997532 1111111 01 011235667889999999986
No 393
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=96.93 E-value=0.0021 Score=59.65 Aligned_cols=71 Identities=21% Similarity=0.385 Sum_probs=45.1
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCc-cEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLV-SVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGV 124 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~-~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag~ 124 (270)
|||+|+||+|++|..++.+|..+++- .+|+.+-.....++..++.. ..+. +... +. .+++++|+||++.|.
T Consensus 2 ~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~g----~~i~-v~d~-~~-~~~~~vDvVf~A~g~ 73 (334)
T PRK14874 2 YNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSFKG----KELK-VEDL-TT-FDFSGVDIALFSAGG 73 (334)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeeeCC----ceeE-EeeC-CH-HHHcCCCEEEECCCh
Confidence 69999999999999999999886552 26777765543333332211 1111 1111 22 346799999998753
No 394
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=96.91 E-value=0.005 Score=59.64 Aligned_cols=92 Identities=20% Similarity=0.170 Sum_probs=61.2
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
....+|+|+|. |.||..+|..+...|. +|+.+|+++...... ..+. .. ..+++++++.||+||.+.|
T Consensus 252 LaGKtVgVIG~-G~IGr~vA~rL~a~Ga--~ViV~e~dp~~a~~A-~~~G-----~~----~~~leell~~ADIVI~atG 318 (476)
T PTZ00075 252 IAGKTVVVCGY-GDVGKGCAQALRGFGA--RVVVTEIDPICALQA-AMEG-----YQ----VVTLEDVVETADIFVTATG 318 (476)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCchhHHHH-HhcC-----ce----eccHHHHHhcCCEEEECCC
Confidence 34568999998 9999999999998888 899998875432111 0111 00 1257788999999999865
Q ss_pred CCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCC
Q 024248 124 VPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP 165 (270)
Q Consensus 124 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNP 165 (270)
... ++. .+.++. ..|++++++++-.
T Consensus 319 t~~--------iI~------~e~~~~---MKpGAiLINvGr~ 343 (476)
T PTZ00075 319 NKD--------IIT------LEHMRR---MKNNAIVGNIGHF 343 (476)
T ss_pred ccc--------ccC------HHHHhc---cCCCcEEEEcCCC
Confidence 321 110 223333 3478899998743
No 395
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=96.90 E-value=0.0071 Score=57.96 Aligned_cols=66 Identities=23% Similarity=0.191 Sum_probs=48.1
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 45 ~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
...+|+|+|. |.+|..++..+...|. +|+++|+++.+..... .+. . . ..+++++++++|+||.+.|
T Consensus 211 ~Gk~VlViG~-G~IG~~vA~~lr~~Ga--~ViV~d~dp~ra~~A~-~~G--~---~----v~~l~eal~~aDVVI~aTG 276 (425)
T PRK05476 211 AGKVVVVAGY-GDVGKGCAQRLRGLGA--RVIVTEVDPICALQAA-MDG--F---R----VMTMEEAAELGDIFVTATG 276 (425)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEEcCCchhhHHHH-hcC--C---E----ecCHHHHHhCCCEEEECCC
Confidence 4568999998 9999999999998888 8999999864321110 111 0 0 1246788899999998864
No 396
>PRK07791 short chain dehydrogenase; Provisional
Probab=96.90 E-value=0.019 Score=51.66 Aligned_cols=35 Identities=31% Similarity=0.407 Sum_probs=31.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~ 82 (270)
.+.+.|+||++.+|..++..|+..|. .|+++|++.
T Consensus 6 ~k~~lITGas~GIG~aia~~la~~G~--~vii~~~~~ 40 (286)
T PRK07791 6 GRVVIVTGAGGGIGRAHALAFAAEGA--RVVVNDIGV 40 (286)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEeeCCc
Confidence 34799999999999999999999998 899998764
No 397
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=96.90 E-value=0.0082 Score=55.17 Aligned_cols=102 Identities=21% Similarity=0.282 Sum_probs=62.6
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
...+||+|+|+ |.+|..++..|...+. .+|+++|++..+. .++...- .... ...+++.+++.++|+||.+.+
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~-~~V~v~~r~~~ra--~~la~~~-g~~~---~~~~~~~~~l~~aDvVi~at~ 247 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAKGV-AEITIANRTYERA--EELAKEL-GGNA---VPLDELLELLNEADVVISATG 247 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHcCC-CEEEEEeCCHHHH--HHHHHHc-CCeE---EeHHHHHHHHhcCCEEEECCC
Confidence 35679999998 9999999988887553 4899999875432 1222110 0111 112356678899999999986
Q ss_pred CCCCCCCchhhhHHhhHHHHHHHHHHHhHh-CCCCEEEEecCCCCC
Q 024248 124 VPRKPGMTRDDLFNINAGIVKTLCEGIAKC-CPKAIVNLISNPVNS 168 (270)
Q Consensus 124 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~sNPv~~ 168 (270)
.+.. ...+... ++.. ....+++-+++|-|.
T Consensus 248 ~~~~------------~~~~~~~---~~~~~~~~~~viDlavPrdi 278 (311)
T cd05213 248 APHY------------AKIVERA---MKKRSGKPRLIVDLAVPRDI 278 (311)
T ss_pred CCch------------HHHHHHH---HhhCCCCCeEEEEeCCCCCC
Confidence 5521 0111222 1111 134577788999884
No 398
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional
Probab=96.89 E-value=0.0044 Score=58.54 Aligned_cols=63 Identities=16% Similarity=0.235 Sum_probs=46.7
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
...++|+|||. |.||+.++..|...|+ +|..+|..... . .... ...++++.++.||+|++...
T Consensus 114 L~gktvGIIG~-G~IG~~vA~~l~a~G~--~V~~~dp~~~~--~---~~~~---------~~~~L~ell~~sDiI~lh~P 176 (378)
T PRK15438 114 LHDRTVGIVGV-GNVGRRLQARLEALGI--KTLLCDPPRAD--R---GDEG---------DFRSLDELVQEADILTFHTP 176 (378)
T ss_pred cCCCEEEEECc-CHHHHHHHHHHHHCCC--EEEEECCcccc--c---cccc---------ccCCHHHHHhhCCEEEEeCC
Confidence 34569999998 9999999999999999 99999964211 0 0000 01368888899999998753
No 399
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=96.89 E-value=0.0053 Score=51.18 Aligned_cols=56 Identities=30% Similarity=0.486 Sum_probs=42.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCCC
Q 024248 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGV 124 (270)
Q Consensus 45 ~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag~ 124 (270)
+.+||+|+|.+..||..++.+|..++. .|++.+.+ |.++++.++.||+||.++|.
T Consensus 35 ~Gk~v~VvGrs~~VG~Pla~lL~~~~a--tVt~~h~~-----------------------T~~l~~~~~~ADIVVsa~G~ 89 (160)
T PF02882_consen 35 EGKKVVVVGRSNIVGKPLAMLLLNKGA--TVTICHSK-----------------------TKNLQEITRRADIVVSAVGK 89 (160)
T ss_dssp TT-EEEEE-TTTTTHHHHHHHHHHTT---EEEEE-TT-----------------------SSSHHHHHTTSSEEEE-SSS
T ss_pred CCCEEEEECCcCCCChHHHHHHHhCCC--eEEeccCC-----------------------CCcccceeeeccEEeeeecc
Confidence 345899999988999999999999987 77777553 34677888999999999986
Q ss_pred C
Q 024248 125 P 125 (270)
Q Consensus 125 ~ 125 (270)
+
T Consensus 90 ~ 90 (160)
T PF02882_consen 90 P 90 (160)
T ss_dssp T
T ss_pred c
Confidence 6
No 400
>PLN02928 oxidoreductase family protein
Probab=96.89 E-value=0.0053 Score=57.37 Aligned_cols=104 Identities=20% Similarity=0.194 Sum_probs=61.6
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHh--hccccCcceeeeeccCCHHHHhCCCCEEEEc
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADI--SHMDTNAVVRGFLGQQQLEDALTGMDIVIIP 121 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl--~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ 121 (270)
...++|+|+|. |.||..+|..|...|+ +|+.+|+.........+ ................++++.++.||+|+++
T Consensus 157 l~gktvGIiG~-G~IG~~vA~~l~afG~--~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~ 233 (347)
T PLN02928 157 LFGKTVFILGY-GAIGIELAKRLRPFGV--KLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLC 233 (347)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHhhCCC--EEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEEC
Confidence 44569999997 9999999999998898 99999986321111111 0000000000000124788999999999998
Q ss_pred CCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEec
Q 024248 122 AGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163 (270)
Q Consensus 122 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~s 163 (270)
.... + .++ .++ | .+. +....|++++|+++
T Consensus 234 lPlt--~-~T~-~li--~----~~~---l~~Mk~ga~lINva 262 (347)
T PLN02928 234 CTLT--K-ETA-GIV--N----DEF---LSSMKKGALLVNIA 262 (347)
T ss_pred CCCC--h-Hhh-ccc--C----HHH---HhcCCCCeEEEECC
Confidence 6322 1 111 111 1 223 33334789999987
No 401
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.89 E-value=0.0054 Score=55.71 Aligned_cols=73 Identities=22% Similarity=0.283 Sum_probs=50.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcC
Q 024248 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (270)
Q Consensus 45 ~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~a 122 (270)
+..||+|+|+ |.+|.++++.|+..|. .+|+++|++..++ .+.++.+. .+... +....++.+.++++|+||.+.
T Consensus 126 ~~k~vlIlGa-GGaaraia~aL~~~G~-~~I~I~nR~~~ka~~la~~l~~~--~~~~~-~~~~~~~~~~~~~aDiVInaT 200 (284)
T PRK12549 126 SLERVVQLGA-GGAGAAVAHALLTLGV-ERLTIFDVDPARAAALADELNAR--FPAAR-ATAGSDLAAALAAADGLVHAT 200 (284)
T ss_pred cCCEEEEECC-cHHHHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHHHHhh--CCCeE-EEeccchHhhhCCCCEEEECC
Confidence 4458999998 9999999999998886 5899999986433 23344322 11111 122234556789999999984
No 402
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.88 E-value=0.11 Score=45.70 Aligned_cols=159 Identities=14% Similarity=0.102 Sum_probs=81.3
Q ss_pred CCeEEEEcCCC-chHHHHHHHHHhCCCccEEEEEeCCCCh--hHHHHhhccccCcceeee----eccCCHHHH-------
Q 024248 46 GFKVAVLGAAG-GIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTNAVVRGF----LGQQQLEDA------- 111 (270)
Q Consensus 46 ~mKI~IIGa~G-~VGs~la~~l~~~g~~~eV~LvD~~~~~--~~~~dl~~~~~~~~~~~i----~~t~d~~~a------- 111 (270)
.+++.|+|++| -+|..++..|+.+|. +|++.|++... ....++........+..+ ....+++++
T Consensus 17 ~k~vlItG~sg~gIG~~ia~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 94 (262)
T PRK07831 17 GKVVLVTAAAGTGIGSATARRALEEGA--RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVER 94 (262)
T ss_pred CCEEEEECCCcccHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 45899999987 599999999999998 89999987532 111222211000111111 111112222
Q ss_pred hCCCCEEEEcCCCCCCCC---Cc---hhhhHHhhHHHHHHHHH----HHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhC
Q 024248 112 LTGMDIVIIPAGVPRKPG---MT---RDDLFNINAGIVKTLCE----GIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVG 181 (270)
Q Consensus 112 l~~ADvVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~----~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~s 181 (270)
+...|++|.++|...... .+ ..+.+..|+.....+++ .+.+....+.+++++..... .
T Consensus 95 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~------------~ 162 (262)
T PRK07831 95 LGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGW------------R 162 (262)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhc------------C
Confidence 236799999998642111 11 12234455554444433 43332224556555432221 0
Q ss_pred CCCCCCeeeechhhHHHHHHHHHHHhCCCCCccceEEEc
Q 024248 182 TYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (270)
Q Consensus 182 g~p~~kviG~t~ldt~r~~~~lA~~l~v~~~~v~~~V~G 220 (270)
+.+..-.++.++..-..+-+.+|..+. +..+++.++-
T Consensus 163 ~~~~~~~Y~~sKaal~~~~~~la~e~~--~~gI~v~~i~ 199 (262)
T PRK07831 163 AQHGQAHYAAAKAGVMALTRCSALEAA--EYGVRINAVA 199 (262)
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHhC--ccCeEEEEEe
Confidence 123333456654444456777777753 3445554443
No 403
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=96.86 E-value=0.0028 Score=59.20 Aligned_cols=74 Identities=22% Similarity=0.357 Sum_probs=46.5
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCC-ccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~-~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~a 122 (270)
..++||+|+||+|++|..+...|..+++ ..++.++......++..+... ..+. +. ..+. +++.++|+||+++
T Consensus 5 ~~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~~~----~~~~-v~-~~~~-~~~~~~D~vf~a~ 77 (344)
T PLN02383 5 ENGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTFEG----RDYT-VE-ELTE-DSFDGVDIALFSA 77 (344)
T ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeeecC----ceeE-EE-eCCH-HHHcCCCEEEECC
Confidence 4568999999999999999999888554 236766655433332222211 1111 11 1133 5678999999987
Q ss_pred CC
Q 024248 123 GV 124 (270)
Q Consensus 123 g~ 124 (270)
+.
T Consensus 78 p~ 79 (344)
T PLN02383 78 GG 79 (344)
T ss_pred Cc
Confidence 53
No 404
>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=96.85 E-value=0.006 Score=56.40 Aligned_cols=73 Identities=27% Similarity=0.328 Sum_probs=46.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhC-CCccEEEEEeCCCChhHH-HHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNTPGVT-ADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~-g~~~eV~LvD~~~~~~~~-~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
++||+|+||+|.||+.+...|.++ -.++++.++-.....|+. .++..... .+. ....|. ..++++|+||+++|
T Consensus 1 ~~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~rSaG~~~~~f~~~~~--~v~--~~~~~~-~~~~~~Divf~~ag 75 (334)
T COG0136 1 KLNVAVLGATGAVGQVLLELLEERHFPFEELVLLASARSAGKKYIEFGGKSI--GVP--EDAADE-FVFSDVDIVFFAAG 75 (334)
T ss_pred CcEEEEEeccchHHHHHHHHHHhcCCCcceEEEEecccccCCccccccCccc--cCc--cccccc-cccccCCEEEEeCc
Confidence 368999999999999999999984 445667777665544433 33332210 000 001232 34669999999986
No 405
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=96.83 E-value=0.0062 Score=55.42 Aligned_cols=97 Identities=22% Similarity=0.243 Sum_probs=61.3
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
.+..||+|+|+ |.+|..++..|...|. +|+++|++.... ....... ...+ ...++++.++++|+||.+..
T Consensus 149 l~gk~v~IiG~-G~iG~avA~~L~~~G~--~V~v~~R~~~~~--~~~~~~g----~~~~-~~~~l~~~l~~aDiVint~P 218 (287)
T TIGR02853 149 IHGSNVMVLGF-GRTGMTIARTFSALGA--RVFVGARSSADL--ARITEMG----LIPF-PLNKLEEKVAEIDIVINTIP 218 (287)
T ss_pred CCCCEEEEEcC-hHHHHHHHHHHHHCCC--EEEEEeCCHHHH--HHHHHCC----Ceee-cHHHHHHHhccCCEEEECCC
Confidence 34568999998 9999999999999897 999999875321 1111110 0111 12356678899999999862
Q ss_pred CCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEec-CCCCC
Q 024248 124 VPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS-NPVNS 168 (270)
Q Consensus 124 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~s-NPv~~ 168 (270)
.. ++ + .+.. ....++++++.++ +|..+
T Consensus 219 ~~---------ii--~----~~~l---~~~k~~aliIDlas~Pg~t 246 (287)
T TIGR02853 219 AL---------VL--T----ADVL---SKLPKHAVIIDLASKPGGT 246 (287)
T ss_pred hH---------Hh--C----HHHH---hcCCCCeEEEEeCcCCCCC
Confidence 21 11 1 1222 2234678888764 78664
No 406
>PRK06940 short chain dehydrogenase; Provisional
Probab=96.83 E-value=0.034 Score=49.69 Aligned_cols=111 Identities=18% Similarity=0.215 Sum_probs=62.2
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCcc-ee-eeeccCCHHHH------hCCCCE
Q 024248 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAV-VR-GFLGQQQLEDA------LTGMDI 117 (270)
Q Consensus 48 KI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~-~~-~i~~t~d~~~a------l~~ADv 117 (270)
.+.|+|+ |.+|..++..|. .|. +|+++|++.... ...++........ +. .+....+.+++ +...|+
T Consensus 4 ~~lItGa-~gIG~~la~~l~-~G~--~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~ 79 (275)
T PRK06940 4 VVVVIGA-GGIGQAIARRVG-AGK--KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG 79 (275)
T ss_pred EEEEECC-ChHHHHHHHHHh-CCC--EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence 4677776 899999999986 687 999999875321 1122221110000 10 01111112222 235899
Q ss_pred EEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhC-CCCEEEEec
Q 024248 118 VIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLIS 163 (270)
Q Consensus 118 VIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~s 163 (270)
+|.++|.... ..+....+..|+.....+++.+.+.- +++.+++++
T Consensus 80 li~nAG~~~~-~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~is 125 (275)
T PRK06940 80 LVHTAGVSPS-QASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIA 125 (275)
T ss_pred EEECCCcCCc-hhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEE
Confidence 9999987532 22344567788877777766665442 234444444
No 407
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=96.83 E-value=0.01 Score=56.62 Aligned_cols=67 Identities=24% Similarity=0.161 Sum_probs=47.7
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
....+|+|+|. |.+|..++..+...|. +|+.+|+++.+.... ..+. . . ..+.+++++++|+||.+.|
T Consensus 193 l~Gk~VvViG~-G~IG~~vA~~ak~~Ga--~ViV~d~dp~r~~~A-~~~G--~-~------v~~leeal~~aDVVItaTG 259 (406)
T TIGR00936 193 IAGKTVVVAGY-GWCGKGIAMRARGMGA--RVIVTEVDPIRALEA-AMDG--F-R------VMTMEEAAKIGDIFITATG 259 (406)
T ss_pred CCcCEEEEECC-CHHHHHHHHHHhhCcC--EEEEEeCChhhHHHH-HhcC--C-E------eCCHHHHHhcCCEEEECCC
Confidence 34568999998 9999999999998888 999999876432111 1111 0 1 1135678899999998764
No 408
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=96.82 E-value=0.0076 Score=57.66 Aligned_cols=71 Identities=20% Similarity=0.191 Sum_probs=46.1
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceee-eeccCCHHHH-hCCCCEEEEcC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRG-FLGQQQLEDA-LTGMDIVIIPA 122 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~-i~~t~d~~~a-l~~ADvVIi~a 122 (270)
|||.|+|+ |.+|..++..|...|+ +|+++|.++.... .+........+.. ......++++ +.++|.||++.
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~--~v~vid~~~~~~~--~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~ 73 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENN--DVTVIDTDEERLR--RLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAVT 73 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC--cEEEEECCHHHHH--HHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEec
Confidence 79999998 9999999999999998 9999999754221 1211000000000 0111234455 78999999985
No 409
>PRK08862 short chain dehydrogenase; Provisional
Probab=96.81 E-value=0.066 Score=46.57 Aligned_cols=35 Identities=14% Similarity=0.117 Sum_probs=31.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT 83 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~ 83 (270)
+.+.|+|+++-+|..++..|+++|. +|+++++++.
T Consensus 6 k~~lVtGas~GIG~aia~~la~~G~--~V~~~~r~~~ 40 (227)
T PRK08862 6 SIILITSAGSVLGRTISCHFARLGA--TLILCDQDQS 40 (227)
T ss_pred eEEEEECCccHHHHHHHHHHHHCCC--EEEEEcCCHH
Confidence 4799999999999999999999998 9999998753
No 410
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.81 E-value=0.058 Score=48.99 Aligned_cols=118 Identities=18% Similarity=0.229 Sum_probs=74.6
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC-hhHH-HHhhccccCcceee----eeccCCHH-------HHh
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVT-ADISHMDTNAVVRG----FLGQQQLE-------DAL 112 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~-~~~~-~dl~~~~~~~~~~~----i~~t~d~~-------~al 112 (270)
.+.|+|+|||.-+|.++|+.++..|. .++++.+... ...+ .++.......++.. +...++.+ .-+
T Consensus 12 ~kvVvITGASsGIG~~lA~~la~~G~--~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f 89 (282)
T KOG1205|consen 12 GKVVLITGASSGIGEALAYELAKRGA--KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF 89 (282)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHhCCC--ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc
Confidence 44689999999999999999999998 8888887653 1122 33332211111110 11122222 235
Q ss_pred CCCCEEEEcCCCCCCCCC-c------hhhhHHhh----HHHHHHHHHHHhHhCCCCEEEEecCCCC
Q 024248 113 TGMDIVIIPAGVPRKPGM-T------RDDLFNIN----AGIVKTLCEGIAKCCPKAIVNLISNPVN 167 (270)
Q Consensus 113 ~~ADvVIi~ag~~~~~g~-~------r~~~~~~N----~~i~~~i~~~i~~~~p~a~viv~sNPv~ 167 (270)
.+.|+.|..||..+ .+. + ....++.| +-..+..++.+++.+ ++.|++++....
T Consensus 90 g~vDvLVNNAG~~~-~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-~GhIVvisSiaG 153 (282)
T KOG1205|consen 90 GRVDVLVNNAGISL-VGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-DGHIVVISSIAG 153 (282)
T ss_pred CCCCEEEecCcccc-ccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-CCeEEEEecccc
Confidence 68999999999876 331 1 12234445 456788888888876 788887776554
No 411
>PRK08040 putative semialdehyde dehydrogenase; Provisional
Probab=96.79 E-value=0.0027 Score=59.11 Aligned_cols=71 Identities=24% Similarity=0.370 Sum_probs=45.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhC--CCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcC
Q 024248 45 PGFKVAVLGAAGGIGQPLAMLMKIN--PLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (270)
Q Consensus 45 ~~mKI~IIGa~G~VGs~la~~l~~~--g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~a 122 (270)
+++||+|+||||++|..+..+|..+ +. .+|.++......|+...+... .+. +... + +.++.++|+||+++
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~-~~l~~laS~~saG~~~~~~~~----~~~-v~~~-~-~~~~~~~Dvvf~a~ 74 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLAERQFPV-GELYALASEESAGETLRFGGK----SVT-VQDA-A-EFDWSQAQLAFFVA 74 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhcCCCCc-eEEEEEEccCcCCceEEECCc----ceE-EEeC-c-hhhccCCCEEEECC
Confidence 5689999999999999999999884 44 388888665433332222111 111 1111 1 23457899999987
Q ss_pred C
Q 024248 123 G 123 (270)
Q Consensus 123 g 123 (270)
+
T Consensus 75 p 75 (336)
T PRK08040 75 G 75 (336)
T ss_pred C
Confidence 4
No 412
>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial.
Probab=96.79 E-value=0.0059 Score=57.34 Aligned_cols=71 Identities=18% Similarity=0.243 Sum_probs=45.4
Q ss_pred CeEEEEcCCCchHHHHHHHHH-hCCCc-cEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMK-INPLV-SVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~-~~g~~-~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
+||+|+||+|.||+.+...|. .+.+. .+++++......+....+.... ..+ ...++. +++++.|++|+++|
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s~g~~~~f~~~~--~~v---~~~~~~-~~~~~vDivffa~g 73 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQLGQAAPSFGGTT--GTL---QDAFDI-DALKALDIIITCQG 73 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchhhCCCcCCCCCCc--ceE---EcCccc-ccccCCCEEEEcCC
Confidence 489999999999999999888 55553 5788887654333222222111 111 112222 36789999999875
No 413
>PRK13302 putative L-aspartate dehydrogenase; Provisional
Probab=96.78 E-value=0.0047 Score=55.74 Aligned_cols=70 Identities=26% Similarity=0.256 Sum_probs=46.1
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhC--CCccEEE-EEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEE
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKIN--PLVSVLH-LYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVII 120 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~--g~~~eV~-LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi 120 (270)
++++||+|||. |.+|..++..+... ++ +|+ ++|++.... .++....... ...+++++.+.++|+|++
T Consensus 4 m~~irIGIIG~-G~IG~~~a~~L~~~~~~~--el~aV~dr~~~~a--~~~a~~~g~~-----~~~~~~eell~~~D~Vvi 73 (271)
T PRK13302 4 RPELRVAIAGL-GAIGKAIAQALDRGLPGL--TLSAVAVRDPQRH--ADFIWGLRRP-----PPVVPLDQLATHADIVVE 73 (271)
T ss_pred CCeeEEEEECc-cHHHHHHHHHHHhcCCCe--EEEEEECCCHHHH--HHHHHhcCCC-----cccCCHHHHhcCCCEEEE
Confidence 34579999997 99999999888763 44 665 778764332 2222110000 113467777889999999
Q ss_pred cCC
Q 024248 121 PAG 123 (270)
Q Consensus 121 ~ag 123 (270)
+++
T Consensus 74 ~tp 76 (271)
T PRK13302 74 AAP 76 (271)
T ss_pred CCC
Confidence 975
No 414
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.78 E-value=0.015 Score=48.93 Aligned_cols=33 Identities=36% Similarity=0.578 Sum_probs=30.0
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCC
Q 024248 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (270)
Q Consensus 48 KI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~ 82 (270)
||+|+|+ |-+|+.++..|+..|. .+++++|.+.
T Consensus 1 ~VlViG~-GglGs~ia~~La~~Gv-g~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGA-GGLGSNIAVLLARSGV-GNLKLVDFDV 33 (174)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCC-CeEEEEeCCE
Confidence 6899998 9999999999999987 5899999984
No 415
>PRK00257 erythronate-4-phosphate dehydrogenase; Validated
Probab=96.78 E-value=0.0057 Score=57.88 Aligned_cols=63 Identities=17% Similarity=0.168 Sum_probs=47.0
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
...++|+|||. |.||+.++..+...|+ +|.++|...... + .. . ...++++.++.||+|++...
T Consensus 114 l~gktvGIIG~-G~IG~~va~~l~a~G~--~V~~~Dp~~~~~---~--~~-----~----~~~~l~ell~~aDiV~lh~P 176 (381)
T PRK00257 114 LAERTYGVVGA-GHVGGRLVRVLRGLGW--KVLVCDPPRQEA---E--GD-----G----DFVSLERILEECDVISLHTP 176 (381)
T ss_pred cCcCEEEEECC-CHHHHHHHHHHHHCCC--EEEEECCccccc---c--cC-----c----cccCHHHHHhhCCEEEEeCc
Confidence 34568999998 9999999999999999 999999743210 0 00 0 01357888899999999764
No 416
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=96.77 E-value=0.019 Score=57.54 Aligned_cols=138 Identities=14% Similarity=0.173 Sum_probs=82.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCC---HHH-HhCCCCEEEEc
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQ---LED-ALTGMDIVIIP 121 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d---~~~-al~~ADvVIi~ 121 (270)
.++|.|+|. |.+|..++..|..+++ +++++|.|++. +..+.+.. .+.+. -..++ +++ .+++||+||++
T Consensus 400 ~~~vII~G~-Gr~G~~va~~L~~~g~--~vvvID~d~~~--v~~~~~~g-~~v~~--GDat~~~~L~~agi~~A~~vv~~ 471 (601)
T PRK03659 400 KPQVIIVGF-GRFGQVIGRLLMANKM--RITVLERDISA--VNLMRKYG-YKVYY--GDATQLELLRAAGAEKAEAIVIT 471 (601)
T ss_pred cCCEEEecC-chHHHHHHHHHHhCCC--CEEEEECCHHH--HHHHHhCC-CeEEE--eeCCCHHHHHhcCCccCCEEEEE
Confidence 468999998 9999999999999999 99999998642 22222221 11111 01122 222 36799999998
Q ss_pred CCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEe-cCCCCCcHHHHHHHHHHhCCCCCCCeeeechhhHHHHH
Q 024248 122 AGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI-SNPVNSTVPIAAEVFKKVGTYDPKRLLGVTMLDVVRAN 200 (270)
Q Consensus 122 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~-sNPv~~~~~i~t~~~~~~sg~p~~kviG~t~ldt~r~~ 200 (270)
.+.. ..| ..++..+++.+|+..++.- .|+.+ .+.+++. |- +.++-=+..-+..+-
T Consensus 472 ~~d~-----------~~n----~~i~~~~r~~~p~~~IiaRa~~~~~------~~~L~~~-Ga--~~vv~e~~es~l~l~ 527 (601)
T PRK03659 472 CNEP-----------EDT----MKIVELCQQHFPHLHILARARGRVE------AHELLQA-GV--TQFSRETFSSALELG 527 (601)
T ss_pred eCCH-----------HHH----HHHHHHHHHHCCCCeEEEEeCCHHH------HHHHHhC-CC--CEEEccHHHHHHHHH
Confidence 5211 334 3466778888899766554 46644 3334443 32 333322333334455
Q ss_pred HHHHHHhCCCCCccc
Q 024248 201 TFVAEVLGLDPREVD 215 (270)
Q Consensus 201 ~~lA~~l~v~~~~v~ 215 (270)
+..=..+|+++.++.
T Consensus 528 ~~~L~~lg~~~~~~~ 542 (601)
T PRK03659 528 RKTLVSLGMHPHQAQ 542 (601)
T ss_pred HHHHHHcCCCHHHHH
Confidence 555566777777663
No 417
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=96.74 E-value=0.0053 Score=54.90 Aligned_cols=68 Identities=25% Similarity=0.255 Sum_probs=44.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~a 122 (270)
+|||+|+|++|.+|..++..+...+-+.-+.++|.+....... .. .. +..++|+++.++++|+||.+.
T Consensus 1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~--~~----~~---i~~~~dl~~ll~~~DvVid~t 68 (257)
T PRK00048 1 MIKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ--GA----LG---VAITDDLEAVLADADVLIDFT 68 (257)
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc--CC----CC---ccccCCHHHhccCCCEEEECC
Confidence 4799999987999999998777643333344578765322111 11 11 123467878788899998665
No 418
>PRK13304 L-aspartate dehydrogenase; Reviewed
Probab=96.73 E-value=0.014 Score=52.51 Aligned_cols=68 Identities=13% Similarity=0.275 Sum_probs=44.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCC-CccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g-~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
|||+|||. |.+|..++..+...+ -..-+.++|++... ..++.+.. . . ...+++++.+.++|+|++++.
T Consensus 2 mrIgIIG~-G~iG~~ia~~l~~~~~~~elv~v~d~~~~~--a~~~a~~~-~--~---~~~~~~~ell~~~DvVvi~a~ 70 (265)
T PRK13304 2 LKIGIVGC-GAIASLITKAILSGRINAELYAFYDRNLEK--AENLASKT-G--A---KACLSIDELVEDVDLVVECAS 70 (265)
T ss_pred CEEEEECc-cHHHHHHHHHHHcCCCCeEEEEEECCCHHH--HHHHHHhc-C--C---eeECCHHHHhcCCCEEEEcCC
Confidence 69999997 999999998887654 22235678886432 22222210 0 1 113467777789999999974
No 419
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=96.73 E-value=0.0083 Score=48.88 Aligned_cols=57 Identities=28% Similarity=0.420 Sum_probs=47.5
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
.+..+|+|+|.+..+|..++..|..+|. .|..++.+ |.+++++++.||+||.+.|
T Consensus 26 ~~gk~v~VvGrs~~vG~pla~lL~~~ga--tV~~~~~~-----------------------t~~l~~~v~~ADIVvsAtg 80 (140)
T cd05212 26 LDGKKVLVVGRSGIVGAPLQCLLQRDGA--TVYSCDWK-----------------------TIQLQSKVHDADVVVVGSP 80 (140)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC--EEEEeCCC-----------------------CcCHHHHHhhCCEEEEecC
Confidence 4456999999999999999999998887 88888753 2256788999999999987
Q ss_pred CC
Q 024248 124 VP 125 (270)
Q Consensus 124 ~~ 125 (270)
.+
T Consensus 81 ~~ 82 (140)
T cd05212 81 KP 82 (140)
T ss_pred CC
Confidence 65
No 420
>PRK06484 short chain dehydrogenase; Validated
Probab=96.72 E-value=0.026 Score=54.91 Aligned_cols=147 Identities=16% Similarity=0.095 Sum_probs=77.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCcceeeeeccCCHH-------HHhCCCC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAVVRGFLGQQQLE-------DALTGMD 116 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~~~~i~~t~d~~-------~al~~AD 116 (270)
...+.|+|+++.+|..++..|+..|. .|++++++.... ...++... .....-.+....+++ +.+...|
T Consensus 5 ~k~~lITGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~~~~~~g~iD 81 (520)
T PRK06484 5 SRVVLVTGAAGGIGRAACQRFARAGD--QVVVADRNVERARERADSLGPD-HHALAMDVSDEAQIREGFEQLHREFGRID 81 (520)
T ss_pred CeEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhCCc-eeEEEeccCCHHHHHHHHHHHHHHhCCCC
Confidence 34789999999999999999999998 999999875321 11122110 000000011111121 2234689
Q ss_pred EEEEcCCCCC---CC--CCc---hhhhHHhhHHHHHHH----HHHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCCC
Q 024248 117 IVIIPAGVPR---KP--GMT---RDDLFNINAGIVKTL----CEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYD 184 (270)
Q Consensus 117 vVIi~ag~~~---~~--g~~---r~~~~~~N~~i~~~i----~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~p 184 (270)
++|.++|... .+ ..+ ....+..|+.....+ .+.+.+....+.|+++|.-... .+.|
T Consensus 82 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~------------~~~~ 149 (520)
T PRK06484 82 VLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGL------------VALP 149 (520)
T ss_pred EEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccC------------CCCC
Confidence 9999998621 11 111 223456666544444 4444332333367666643321 0123
Q ss_pred CCCeeeechhhHHHHHHHHHHHh
Q 024248 185 PKRLLGVTMLDVVRANTFVAEVL 207 (270)
Q Consensus 185 ~~kviG~t~ldt~r~~~~lA~~l 207 (270)
..-.++.++..-..+-+.++..+
T Consensus 150 ~~~~Y~asKaal~~l~~~la~e~ 172 (520)
T PRK06484 150 KRTAYSASKAAVISLTRSLACEW 172 (520)
T ss_pred CCchHHHHHHHHHHHHHHHHHHh
Confidence 23345555444445666666665
No 421
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=96.72 E-value=0.009 Score=55.31 Aligned_cols=94 Identities=17% Similarity=0.121 Sum_probs=59.9
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHH-hCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEc
Q 024248 43 GSPGFKVAVLGAAGGIGQPLAMLMK-INPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIP 121 (270)
Q Consensus 43 ~~~~mKI~IIGa~G~VGs~la~~l~-~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ 121 (270)
....++|+|+|. |.||..++..+. ..|+ +|..+|+........++. . . ..++++.++.||+|++.
T Consensus 142 ~L~gktvGIiG~-G~IG~~va~~l~~~fgm--~V~~~~~~~~~~~~~~~~-------~---~-~~~l~ell~~sDvv~lh 207 (323)
T PRK15409 142 DVHHKTLGIVGM-GRIGMALAQRAHFGFNM--PILYNARRHHKEAEERFN-------A---R-YCDLDTLLQESDFVCII 207 (323)
T ss_pred CCCCCEEEEEcc-cHHHHHHHHHHHhcCCC--EEEEECCCCchhhHHhcC-------c---E-ecCHHHHHHhCCEEEEe
Confidence 345679999997 999999999887 6777 999888753211111110 0 1 12688899999999998
Q ss_pred CCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEec
Q 024248 122 AGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163 (270)
Q Consensus 122 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~s 163 (270)
..... .++ .++ | .+.++.+ .|++++||++
T Consensus 208 ~plt~---~T~-~li--~----~~~l~~m---k~ga~lIN~a 236 (323)
T PRK15409 208 LPLTD---ETH-HLF--G----AEQFAKM---KSSAIFINAG 236 (323)
T ss_pred CCCCh---HHh-hcc--C----HHHHhcC---CCCeEEEECC
Confidence 63221 111 111 2 2333443 4889999987
No 422
>PRK12557 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein; Provisional
Probab=96.71 E-value=0.019 Score=53.52 Aligned_cols=56 Identities=13% Similarity=-0.043 Sum_probs=37.5
Q ss_pred hHHHHHHHHHhCCCccEEEEEeCCCChh---HHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcC
Q 024248 58 IGQPLAMLMKINPLVSVLHLYDVVNTPG---VTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (270)
Q Consensus 58 VGs~la~~l~~~g~~~eV~LvD~~~~~~---~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~a 122 (270)
=|..+|..|+..|+ +|+++|+++... ....+... .+ ..+++..+++++||+||++.
T Consensus 31 gG~~MA~~La~aG~--~V~v~Dr~~~~l~~~~~~~l~~~----Gi---~~asd~~eaa~~ADvVIlaV 89 (342)
T PRK12557 31 GGSRMAIEFAEAGH--DVVLAEPNRSILSEELWKKVEDA----GV---KVVSDDAEAAKHGEIHILFT 89 (342)
T ss_pred CHHHHHHHHHhCCC--eEEEEECCHHHhhHHHHHHHHHC----CC---EEeCCHHHHHhCCCEEEEEC
Confidence 37788888999998 999999975311 11112211 11 22346778889999999985
No 423
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.69 E-value=0.025 Score=49.69 Aligned_cols=99 Identities=23% Similarity=0.331 Sum_probs=62.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCcc--EEEEEeCCC----Chh-----HHHHhhccccCcceeeeeccCCHHHHhC
Q 024248 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVS--VLHLYDVVN----TPG-----VTADISHMDTNAVVRGFLGQQQLEDALT 113 (270)
Q Consensus 45 ~~mKI~IIGa~G~VGs~la~~l~~~g~~~--eV~LvD~~~----~~~-----~~~dl~~~~~~~~~~~i~~t~d~~~al~ 113 (270)
+.+||+|+|| |..|..++..|...|. + +|+++|++. ... ...++.+...... . ..+++++++
T Consensus 24 ~~~rvlvlGA-GgAg~aiA~~L~~~G~-~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~---~--~~~l~~~l~ 96 (226)
T cd05311 24 EEVKIVINGA-GAAGIAIARLLLAAGA-KPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK---T--GGTLKEALK 96 (226)
T ss_pred cCCEEEEECc-hHHHHHHHHHHHHcCc-CcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc---c--cCCHHHHHh
Confidence 4468999998 9999999999998887 4 799999983 221 1122222110000 1 125778899
Q ss_pred CCCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCCC
Q 024248 114 GMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNS 168 (270)
Q Consensus 114 ~ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~~ 168 (270)
++|+||-+.+ +|. +. .+.++.+ +++.+++.++||...
T Consensus 97 ~~dvlIgaT~----~G~-----~~------~~~l~~m---~~~~ivf~lsnP~~e 133 (226)
T cd05311 97 GADVFIGVSR----PGV-----VK------KEMIKKM---AKDPIVFALANPVPE 133 (226)
T ss_pred cCCEEEeCCC----CCC-----CC------HHHHHhh---CCCCEEEEeCCCCCc
Confidence 9999998864 232 11 2333333 366777778899753
No 424
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=96.69 E-value=0.023 Score=51.51 Aligned_cols=101 Identities=22% Similarity=0.301 Sum_probs=69.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhC----CCc-----cEEEEEeCCCC----hh----HHHHhhccccCcceeeeeccCCH
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKIN----PLV-----SVLHLYDVVNT----PG----VTADISHMDTNAVVRGFLGQQQL 108 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~----g~~-----~eV~LvD~~~~----~~----~~~dl~~~~~~~~~~~i~~t~d~ 108 (270)
.-||++.|| |.-|..++.+|... |+. +.++++|++-. .. ....+.+.. .. ....++
T Consensus 25 d~~iv~~GA-GsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~~~~~~~a~~~-~~-----~~~~~L 97 (279)
T cd05312 25 DQRILFLGA-GSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDLTPFKKPFARKD-EE-----KEGKSL 97 (279)
T ss_pred hcEEEEECc-CHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcchHHHHHHHhhc-Cc-----ccCCCH
Confidence 358999998 99999999877654 762 48999999742 11 111222210 00 123579
Q ss_pred HHHhC--CCCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCC
Q 024248 109 EDALT--GMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVN 167 (270)
Q Consensus 109 ~~al~--~ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~ 167 (270)
+++++ ++|++|=+.+.+ |- +.+++++.+.+.+++.+|+-.|||..
T Consensus 98 ~e~i~~v~ptvlIG~S~~~---g~-----------ft~evv~~Ma~~~~~PIIFaLSNPt~ 144 (279)
T cd05312 98 LEVVKAVKPTVLIGLSGVG---GA-----------FTEEVVRAMAKSNERPIIFALSNPTS 144 (279)
T ss_pred HHHHHhcCCCEEEEeCCCC---CC-----------CCHHHHHHHHhcCCCCEEEECCCcCC
Confidence 99999 999988765433 21 12678889999999999999999975
No 425
>PRK06125 short chain dehydrogenase; Provisional
Probab=96.69 E-value=0.25 Score=43.27 Aligned_cols=115 Identities=17% Similarity=0.158 Sum_probs=63.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCcceee----eeccCCHHH---HhCCCC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAVVRG----FLGQQQLED---ALTGMD 116 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~~~~----i~~t~d~~~---al~~AD 116 (270)
.+++.|+|++|.+|..++..|+..|. +|++++++.... ...++.... ...+.. +....++++ .+...|
T Consensus 7 ~k~vlItG~~~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~g~id 83 (259)
T PRK06125 7 GKRVLITGASKGIGAAAAEAFAAEGC--HLHLVARDADALEALAADLRAAH-GVDVAVHALDLSSPEAREQLAAEAGDID 83 (259)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHHhCCCC
Confidence 35799999999999999999999998 999999875322 112232110 011111 111111212 245689
Q ss_pred EEEEcCCCCCCCC---Cc---hhhhHHhhHHHHHH----HHHHHhHhCCCCEEEEecC
Q 024248 117 IVIIPAGVPRKPG---MT---RDDLFNINAGIVKT----LCEGIAKCCPKAIVNLISN 164 (270)
Q Consensus 117 vVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~----i~~~i~~~~p~a~viv~sN 164 (270)
++|.++|...... .+ ....+..|+..... +.+.+.+. ..+.++++|.
T Consensus 84 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~iss 140 (259)
T PRK06125 84 ILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKAR-GSGVIVNVIG 140 (259)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEecC
Confidence 9999998642111 11 12234556554444 44444432 2355665553
No 426
>PRK05599 hypothetical protein; Provisional
Probab=96.69 E-value=0.14 Score=44.81 Aligned_cols=155 Identities=11% Similarity=0.132 Sum_probs=82.2
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCcceee----eeccCCH-------HHHhC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAVVRG----FLGQQQL-------EDALT 113 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~~~~----i~~t~d~-------~~al~ 113 (270)
|.+.|+||++-+|..++..|+ +|. .|++.++++... ...++..... ..+.. +....+. .+.+.
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~--~Vil~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 76 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGE--DVVLAARRPEAAQGLASDLRQRGA-TSVHVLSFDAQDLDTHRELVKQTQELAG 76 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCC--EEEEEeCCHHHHHHHHHHHHhccC-CceEEEEcccCCHHHHHHHHHHHHHhcC
Confidence 468999999999999999988 476 999999875422 2223332110 01110 1111111 12234
Q ss_pred CCCEEEEcCCCCCCCC---Cch---hhhHHhhHH----HHHHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHHHHHhCCC
Q 024248 114 GMDIVIIPAGVPRKPG---MTR---DDLFNINAG----IVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTY 183 (270)
Q Consensus 114 ~ADvVIi~ag~~~~~g---~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~~~~sg~ 183 (270)
.-|++|..+|...... .+. .+....|+. ..+.+.+.+.+...++.|+++|.-... .+.
T Consensus 77 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~------------~~~ 144 (246)
T PRK05599 77 EISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGW------------RAR 144 (246)
T ss_pred CCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccc------------cCC
Confidence 6899999998642211 111 122233332 333445556543335677777654331 012
Q ss_pred CCCCeeeechhhHHHHHHHHHHHhCCCCCccceEEE
Q 024248 184 DPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVV 219 (270)
Q Consensus 184 p~~kviG~t~ldt~r~~~~lA~~l~v~~~~v~~~V~ 219 (270)
|..-.++.++-....+-+.++..++ +..|++..+
T Consensus 145 ~~~~~Y~asKaa~~~~~~~la~el~--~~~I~v~~v 178 (246)
T PRK05599 145 RANYVYGSTKAGLDAFCQGLADSLH--GSHVRLIIA 178 (246)
T ss_pred cCCcchhhHHHHHHHHHHHHHHHhc--CCCceEEEe
Confidence 2233456655555567777888774 334554433
No 427
>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=96.68 E-value=0.0047 Score=57.23 Aligned_cols=74 Identities=26% Similarity=0.280 Sum_probs=46.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhcccc--CcceeeeeccCCHHHH-hCCCCEEEEcC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT--NAVVRGFLGQQQLEDA-LTGMDIVIIPA 122 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~--~~~~~~i~~t~d~~~a-l~~ADvVIi~a 122 (270)
++||+|+||+|+.|.-+..+|..++.. |+.++...+..++...-.+... ...++ + .+.|.++. ..+||+||++.
T Consensus 2 ~~kV~IvGasGYtG~EL~rlL~~Hp~v-e~~~~ss~~~~g~~~~~~~p~l~g~~~l~-~-~~~~~~~~~~~~~DvvFlal 78 (349)
T COG0002 2 MIKVGIVGASGYTGLELLRLLAGHPDV-ELILISSRERAGKPVSDVHPNLRGLVDLP-F-QTIDPEKIELDECDVVFLAL 78 (349)
T ss_pred CceEEEEcCCCCcHHHHHHHHhcCCCe-EEEEeechhhcCCchHHhCcccccccccc-c-ccCChhhhhcccCCEEEEec
Confidence 569999999999999999999998766 6888877653333221111111 11111 1 12233333 45699999985
No 428
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=96.67 E-value=0.0089 Score=56.33 Aligned_cols=77 Identities=17% Similarity=0.222 Sum_probs=50.6
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceee-eeccCCHHHHhCCCCEEEEc
Q 024248 43 GSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRG-FLGQQQLEDALTGMDIVIIP 121 (270)
Q Consensus 43 ~~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~-i~~t~d~~~al~~ADvVIi~ 121 (270)
+.++.||+|+|+ |.+|...+..+...|. +|+.+|++..... .+.... ...+.. .....++.+.++++|+||.+
T Consensus 164 ~l~~~~VlViGa-G~vG~~aa~~a~~lGa--~V~v~d~~~~~~~--~l~~~~-g~~v~~~~~~~~~l~~~l~~aDvVI~a 237 (370)
T TIGR00518 164 GVEPGDVTIIGG-GVVGTNAAKMANGLGA--TVTILDINIDRLR--QLDAEF-GGRIHTRYSNAYEIEDAVKRADLLIGA 237 (370)
T ss_pred CCCCceEEEEcC-CHHHHHHHHHHHHCCC--eEEEEECCHHHHH--HHHHhc-CceeEeccCCHHHHHHHHccCCEEEEc
Confidence 345668999998 9999999999998897 8999998753221 111110 000000 11113466788999999998
Q ss_pred CCCC
Q 024248 122 AGVP 125 (270)
Q Consensus 122 ag~~ 125 (270)
++.+
T Consensus 238 ~~~~ 241 (370)
T TIGR00518 238 VLIP 241 (370)
T ss_pred cccC
Confidence 7554
No 429
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.66 E-value=0.028 Score=49.46 Aligned_cols=157 Identities=14% Similarity=0.162 Sum_probs=79.3
Q ss_pred CeEEEEcCC--CchHHHHHHHHHhCCCccEEEEEeCCCCh-hHHHHhhccccCccee-eeeccCCHH-------HHhCCC
Q 024248 47 FKVAVLGAA--GGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTNAVVR-GFLGQQQLE-------DALTGM 115 (270)
Q Consensus 47 mKI~IIGa~--G~VGs~la~~l~~~g~~~eV~LvD~~~~~-~~~~dl~~~~~~~~~~-~i~~t~d~~-------~al~~A 115 (270)
+.+.|+||+ +-+|..++..|++.|. .|++.+++... ....++..... ..+. .+....+.+ +.+...
T Consensus 8 k~~lItGas~~~gIG~a~a~~la~~G~--~Vi~~~r~~~~~~~~~~~~~~~~-~~~~~Dl~~~~~v~~~~~~~~~~~g~i 84 (252)
T PRK06079 8 KKIVVMGVANKRSIAWGCAQAIKDQGA--TVIYTYQNDRMKKSLQKLVDEED-LLVECDVASDESIERAFATIKERVGKI 84 (252)
T ss_pred CEEEEeCCCCCCchHHHHHHHHHHCCC--EEEEecCchHHHHHHHhhccCce-eEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence 479999997 5899999999999998 99999886321 11112211100 0000 011111111 123457
Q ss_pred CEEEEcCCCCCC---CC----Cch---hhhHHhhHHHHHHHHHHHhHhC-CCCEEEEecCCCCCcHHHHHHHHHHhCCCC
Q 024248 116 DIVIIPAGVPRK---PG----MTR---DDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVGTYD 184 (270)
Q Consensus 116 DvVIi~ag~~~~---~g----~~r---~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~sNPv~~~~~i~t~~~~~~sg~p 184 (270)
|++|..+|.... .+ .+. ...+..|+.....+++.+...- ..+.++++|.-... . +.|
T Consensus 85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~----------~--~~~ 152 (252)
T PRK06079 85 DGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSE----------R--AIP 152 (252)
T ss_pred CEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCcc----------c--cCC
Confidence 999999986421 01 111 1234455544443444433321 24566666532220 0 122
Q ss_pred CCCeeeechhhHHHHHHHHHHHhCCCCCccceEEEc
Q 024248 185 PKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (270)
Q Consensus 185 ~~kviG~t~ldt~r~~~~lA~~l~v~~~~v~~~V~G 220 (270)
..-.++.++-.-..|-+.+|.++. +..|++..+-
T Consensus 153 ~~~~Y~asKaal~~l~~~la~el~--~~gI~vn~i~ 186 (252)
T PRK06079 153 NYNVMGIAKAALESSVRYLARDLG--KKGIRVNAIS 186 (252)
T ss_pred cchhhHHHHHHHHHHHHHHHHHhh--hcCcEEEEEe
Confidence 222355555555567777777763 3445544443
No 430
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=96.66 E-value=0.005 Score=57.34 Aligned_cols=71 Identities=21% Similarity=0.392 Sum_probs=44.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCC-ccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~-~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
.+||+|+||||++|.-+..+|.++++ ..+++++...+..|+...+... .+. +... +. ++++++|+||++.+
T Consensus 4 ~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~l~~~~~----~l~-~~~~-~~-~~~~~vD~vFla~p 75 (336)
T PRK05671 4 PLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAGHSVPFAGK----NLR-VREV-DS-FDFSQVQLAFFAAG 75 (336)
T ss_pred CCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCeeccCCc----ceE-EeeC-Ch-HHhcCCCEEEEcCC
Confidence 36999999999999999999986543 2366677554333322222211 111 1112 22 33689999999864
No 431
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=96.65 E-value=0.0098 Score=49.56 Aligned_cols=65 Identities=17% Similarity=0.218 Sum_probs=43.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~a 122 (270)
..+|+|||- |.-|...|..|.+.|+ +|+.-.+........--.+. | ...+++|+++.||+|+++.
T Consensus 4 ~k~IAViGy-GsQG~a~AlNLrDSG~--~V~Vglr~~s~s~~~A~~~G--------f-~v~~~~eAv~~aDvV~~L~ 68 (165)
T PF07991_consen 4 GKTIAVIGY-GSQGHAHALNLRDSGV--NVIVGLREGSASWEKAKADG--------F-EVMSVAEAVKKADVVMLLL 68 (165)
T ss_dssp TSEEEEES--SHHHHHHHHHHHHCC---EEEEEE-TTCHHHHHHHHTT----------ECCEHHHHHHC-SEEEE-S
T ss_pred CCEEEEECC-ChHHHHHHHHHHhCCC--CEEEEecCCCcCHHHHHHCC--------C-eeccHHHHHhhCCEEEEeC
Confidence 458999998 9999999999999999 88877775442221111221 1 1236789999999999985
No 432
>PLN02494 adenosylhomocysteinase
Probab=96.64 E-value=0.016 Score=56.06 Aligned_cols=90 Identities=21% Similarity=0.198 Sum_probs=60.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh-HHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG-VTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 45 ~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~-~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
...+|+|+|. |.+|..++..+...|. +|+.+|+++... .+.+ +. +. ..+++++++.+|+||.+.|
T Consensus 253 aGKtVvViGy-G~IGr~vA~~aka~Ga--~VIV~e~dp~r~~eA~~--~G--~~-------vv~leEal~~ADVVI~tTG 318 (477)
T PLN02494 253 AGKVAVICGY-GDVGKGCAAAMKAAGA--RVIVTEIDPICALQALM--EG--YQ-------VLTLEDVVSEADIFVTTTG 318 (477)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCchhhHHHHh--cC--Ce-------eccHHHHHhhCCEEEECCC
Confidence 4568999998 9999999999998888 899999876421 2211 11 00 1146678999999998765
Q ss_pred CCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCC
Q 024248 124 VPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP 165 (270)
Q Consensus 124 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNP 165 (270)
... . +..+. +....+++++++++-+
T Consensus 319 t~~--------v------I~~e~---L~~MK~GAiLiNvGr~ 343 (477)
T PLN02494 319 NKD--------I------IMVDH---MRKMKNNAIVCNIGHF 343 (477)
T ss_pred Ccc--------c------hHHHH---HhcCCCCCEEEEcCCC
Confidence 321 0 01222 3333478999999864
No 433
>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional
Probab=96.63 E-value=0.004 Score=58.16 Aligned_cols=72 Identities=25% Similarity=0.486 Sum_probs=46.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCc--cEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcC
Q 024248 45 PGFKVAVLGAAGGIGQPLAMLMKINPLV--SVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (270)
Q Consensus 45 ~~mKI~IIGa~G~VGs~la~~l~~~g~~--~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~a 122 (270)
+++||+|+||+|++|..+..+|...+.+ .++.++......|+...+... .+. +. ..|. +.+.++|+||+++
T Consensus 4 ~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~~~~~~----~l~-v~-~~~~-~~~~~~Divf~a~ 76 (347)
T PRK06728 4 KGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTVQFKGR----EII-IQ-EAKI-NSFEGVDIAFFSA 76 (347)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCeeeCCc----ceE-EE-eCCH-HHhcCCCEEEECC
Confidence 4579999999999999999999854433 257788765444433322211 111 11 1243 4578999999987
Q ss_pred C
Q 024248 123 G 123 (270)
Q Consensus 123 g 123 (270)
+
T Consensus 77 ~ 77 (347)
T PRK06728 77 G 77 (347)
T ss_pred C
Confidence 5
No 434
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=96.62 E-value=0.0023 Score=60.30 Aligned_cols=74 Identities=24% Similarity=0.278 Sum_probs=45.3
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceee----eeccCCHHHHhCCCCEEEEcCCC
Q 024248 49 VAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRG----FLGQQQLEDALTGMDIVIIPAGV 124 (270)
Q Consensus 49 I~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~----i~~t~d~~~al~~ADvVIi~ag~ 124 (270)
|+|+|+ |++|+.++..|++.+...+|++.|++..+... +........+.. +....++++.++++|+||.++|.
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~--~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp 77 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAER--LAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGP 77 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHH--HHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSG
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHH--HHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCcc
Confidence 789999 99999999999988766699999998643221 111000111111 11112356788999999999864
Q ss_pred C
Q 024248 125 P 125 (270)
Q Consensus 125 ~ 125 (270)
.
T Consensus 78 ~ 78 (386)
T PF03435_consen 78 F 78 (386)
T ss_dssp G
T ss_pred c
Confidence 4
No 435
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=96.62 E-value=0.016 Score=53.68 Aligned_cols=93 Identities=25% Similarity=0.247 Sum_probs=60.8
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
.+.++++|+|. |.||..+|..+.--|+ +|..+|+... .+..+.... ... ++++.++.||+|++.+.
T Consensus 144 l~gktvGIiG~-GrIG~avA~r~~~Fgm--~v~y~~~~~~-~~~~~~~~~---------~y~-~l~ell~~sDii~l~~P 209 (324)
T COG1052 144 LRGKTLGIIGL-GRIGQAVARRLKGFGM--KVLYYDRSPN-PEAEKELGA---------RYV-DLDELLAESDIISLHCP 209 (324)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHhcCCC--EEEEECCCCC-hHHHhhcCc---------eec-cHHHHHHhCCEEEEeCC
Confidence 45679999997 9999999999996677 9999999754 111111111 112 37888999999999863
Q ss_pred CCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEec
Q 024248 124 VPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163 (270)
Q Consensus 124 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~s 163 (270)
... +++ . .-| .+. +++..|++++||.+
T Consensus 210 lt~---~T~-h--Lin----~~~---l~~mk~ga~lVNta 236 (324)
T COG1052 210 LTP---ETR-H--LIN----AEE---LAKMKPGAILVNTA 236 (324)
T ss_pred CCh---HHh-h--hcC----HHH---HHhCCCCeEEEECC
Confidence 221 111 1 112 223 33334788999987
No 436
>PF03949 Malic_M: Malic enzyme, NAD binding domain; InterPro: IPR012302 Malic enzymes (malate oxidoreductases) catalyse the oxidative decarboxylation of malate to form pyruvate [], a reaction important in a number of metabolic pathways - e.g. carbon dioxide released from the reaction may be used in sugar production during the Calvin cycle of photosynthesis []. There are 3 forms of the enzyme []: an NAD-dependent form that decarboxylates oxaloacetate; an NAD-dependent form that does not decarboxylate oxalo-acetate; and an NADPH-dependent form []. Other proteins known to be similar to malic enzymes are the Escherichia coli scfA protein; an enzyme from Zea mays (Maize), formerly thought to be cinnamyl-alcohol dehydrogenase []; and the hypothetical Saccharomyces cerevisiae protein YKL029c. Studies on the duck liver malic enzyme reveals that it can be alkylated by bromopyruvate, resulting in the loss of oxidative decarboxylation and the subsequent enhancement of pyruvate reductase activity []. The alkylated form is able to bind NADPH but not L-malate, indicating impaired substrate-or divalent metal ion-binding in the active site []. Sequence analysis has highlighted a cysteine residue as the point of alkylation, suggesting that it may play an important role in the activity of the enzyme [], although it is absent in the sequences from some species. There are three well conserved regions in the enzyme sequences. Two of them seem to be involved in the binding NAD or NADP. The significance of the third one, located in the central part of the enzymes, is not yet known.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 2DVM_B 1WW8_A 3NV9_A 1PJ2_A 1PJL_B 1GZ3_A 1PJ4_A 1PJ3_C 1EFL_A 1EFK_B ....
Probab=96.61 E-value=0.0058 Score=54.62 Aligned_cols=101 Identities=21% Similarity=0.279 Sum_probs=67.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhC----CCc-----cEEEEEeCCCC--hh------HHHHhhccccCcceeeeeccCCHH
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKIN----PLV-----SVLHLYDVVNT--PG------VTADISHMDTNAVVRGFLGQQQLE 109 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~----g~~-----~eV~LvD~~~~--~~------~~~dl~~~~~~~~~~~i~~t~d~~ 109 (270)
.||+++|| |..|..++.+|... |+- +.++++|++-. .. ....+.+... + . ....++.
T Consensus 26 ~riv~~GA-GsAg~gia~ll~~~~~~~G~~~~eA~~~i~lvD~~Gll~~~r~~l~~~~~~~a~~~~-~-~---~~~~~L~ 99 (255)
T PF03949_consen 26 QRIVFFGA-GSAGIGIARLLVAAMVREGLSEEEARKRIWLVDSKGLLTDDREDLNPHKKPFARKTN-P-E---KDWGSLL 99 (255)
T ss_dssp -EEEEEB--SHHHHHHHHHHHHHHHCTTS-HHHHHTTEEEEETTEEEBTTTSSHSHHHHHHHBSSS-T-T---T--SSHH
T ss_pred cEEEEeCC-ChhHHHHHHHHHHHHHHhcCCHHHHhccEEEEeccceEeccCccCChhhhhhhccCc-c-c---ccccCHH
Confidence 48999998 99999999877654 874 68999999731 11 1122222211 1 0 0114789
Q ss_pred HHhCCC--CEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCC
Q 024248 110 DALTGM--DIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVN 167 (270)
Q Consensus 110 ~al~~A--DvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~ 167 (270)
++++++ |++|=+.+.+ |. +.+++++.+.+++++.+|+=.|||..
T Consensus 100 eav~~~kPtvLIG~S~~~---g~-----------ft~evv~~Ma~~~erPIIF~LSNPt~ 145 (255)
T PF03949_consen 100 EAVKGAKPTVLIGLSGQG---GA-----------FTEEVVRAMAKHNERPIIFPLSNPTP 145 (255)
T ss_dssp HHHHCH--SEEEECSSST---TS-----------S-HHHHHHCHHHSSSEEEEE-SSSCG
T ss_pred HHHHhcCCCEEEEecCCC---Cc-----------CCHHHHHHHhccCCCCEEEECCCCCC
Confidence 999999 9988876543 21 23778999999999999998999976
No 437
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=96.59 E-value=0.033 Score=48.94 Aligned_cols=156 Identities=17% Similarity=0.063 Sum_probs=80.1
Q ss_pred eEEEEcCCCchHHHHHHHHHh----CCCccEEEEEeCCCChh--HHHHhhccccCcceee----eeccCCHHHHh---C-
Q 024248 48 KVAVLGAAGGIGQPLAMLMKI----NPLVSVLHLYDVVNTPG--VTADISHMDTNAVVRG----FLGQQQLEDAL---T- 113 (270)
Q Consensus 48 KI~IIGa~G~VGs~la~~l~~----~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~~~~----i~~t~d~~~al---~- 113 (270)
.+.|+||++.+|..++..|+. .|. .|++.+++.... ...++........+.. +....+.++.+ .
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~--~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~ 79 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGS--VLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRE 79 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCc--EEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHh
Confidence 478999999999999998886 677 899999875321 2223332100011111 11111121211 1
Q ss_pred -------CCCEEEEcCCCCCCC----C--Cc---hhhhHHhhHHHH----HHHHHHHhHh-CCCCEEEEecCCCCCcHHH
Q 024248 114 -------GMDIVIIPAGVPRKP----G--MT---RDDLFNINAGIV----KTLCEGIAKC-CPKAIVNLISNPVNSTVPI 172 (270)
Q Consensus 114 -------~ADvVIi~ag~~~~~----g--~~---r~~~~~~N~~i~----~~i~~~i~~~-~p~a~viv~sNPv~~~~~i 172 (270)
+-|++|..+|..... . .+ ....+..|+... +.+.+.+++. ...+.|+++|.....
T Consensus 80 ~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~---- 155 (256)
T TIGR01500 80 LPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAI---- 155 (256)
T ss_pred ccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhC----
Confidence 125888888853211 1 11 123456666544 4444444432 123566666543220
Q ss_pred HHHHHHHhCCCCCCCeeeechhhHHHHHHHHHHHhCCCCCccceEEE
Q 024248 173 AAEVFKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVV 219 (270)
Q Consensus 173 ~t~~~~~~sg~p~~kviG~t~ldt~r~~~~lA~~l~v~~~~v~~~V~ 219 (270)
.++|..-.++.++..-..+.+.++..+. +..+++.++
T Consensus 156 --------~~~~~~~~Y~asKaal~~l~~~la~e~~--~~~i~v~~v 192 (256)
T TIGR01500 156 --------QPFKGWALYCAGKAARDMLFQVLALEEK--NPNVRVLNY 192 (256)
T ss_pred --------CCCCCchHHHHHHHHHHHHHHHHHHHhc--CCCeEEEEe
Confidence 1223223355555444567777777764 455666555
No 438
>PRK06436 glycerate dehydrogenase; Provisional
Probab=96.58 E-value=0.013 Score=53.84 Aligned_cols=94 Identities=20% Similarity=0.241 Sum_probs=61.4
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
-..++|+|+|. |.||..+|..+...|+ +|+.+|+..... .. . ....++++.++.||+|+++..
T Consensus 120 L~gktvgIiG~-G~IG~~vA~~l~afG~--~V~~~~r~~~~~------~~------~--~~~~~l~ell~~aDiv~~~lp 182 (303)
T PRK06436 120 LYNKSLGILGY-GGIGRRVALLAKAFGM--NIYAYTRSYVND------GI------S--SIYMEPEDIMKKSDFVLISLP 182 (303)
T ss_pred CCCCEEEEECc-CHHHHHHHHHHHHCCC--EEEEECCCCccc------Cc------c--cccCCHHHHHhhCCEEEECCC
Confidence 34568999997 9999999998887788 999999853210 00 0 001367888999999999863
Q ss_pred CCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEec--CCCC
Q 024248 124 VPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS--NPVN 167 (270)
Q Consensus 124 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~s--NPv~ 167 (270)
... .++ .++ | .+.++.+ .|++++|+++ .++|
T Consensus 183 ~t~---~T~-~li--~----~~~l~~m---k~ga~lIN~sRG~~vd 215 (303)
T PRK06436 183 LTD---ETR-GMI--N----SKMLSLF---RKGLAIINVARADVVD 215 (303)
T ss_pred CCc---hhh-cCc--C----HHHHhcC---CCCeEEEECCCccccC
Confidence 221 111 111 1 2333333 4788999987 4566
No 439
>cd00762 NAD_bind_malic_enz NAD(P) binding domain of malic enzyme. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glut
Probab=96.58 E-value=0.01 Score=52.97 Aligned_cols=102 Identities=21% Similarity=0.216 Sum_probs=68.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCC----Cc-----cEEEEEeCCCC----hh----HHHHhhccccCcceeeeeccCCH
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINP----LV-----SVLHLYDVVNT----PG----VTADISHMDTNAVVRGFLGQQQL 108 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g----~~-----~eV~LvD~~~~----~~----~~~dl~~~~~~~~~~~i~~t~d~ 108 (270)
..||++.|| |..|..++.+|...+ +. +.++++|.+-. .. ....+.+. .+-. ....++
T Consensus 25 d~riv~~GA-GsAg~gia~ll~~~~~~~Gls~e~A~~~i~~vD~~Gll~~~r~~l~~~~~~~~~~---~~~~--~~~~~L 98 (254)
T cd00762 25 EHKVLFNGA-GAAALGIANLIVXLXVKEGISKEEACKRIWXVDRKGLLVKNRKETCPNEYHLARF---ANPE--RESGDL 98 (254)
T ss_pred hcEEEEECc-CHHHHHHHHHHHHHHHhcCCCHHHHhccEEEECCCCeEeCCCCccCHHHHHHHHH---cCcc--cccCCH
Confidence 358999998 999999998776543 31 28999998742 10 00111101 0100 123589
Q ss_pred HHHhC--CCCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCC
Q 024248 109 EDALT--GMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVN 167 (270)
Q Consensus 109 ~~al~--~ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~ 167 (270)
.++++ ++|++|=+.+.+ | -+.+++++.|.+++++.+|+-.|||..
T Consensus 99 ~eav~~~kptvlIG~S~~~---g-----------~ft~evv~~Ma~~~~~PIIFaLSNPt~ 145 (254)
T cd00762 99 EDAVEAAKPDFLIGVSRVG---G-----------AFTPEVIRAXAEINERPVIFALSNPTS 145 (254)
T ss_pred HHHHHhhCCCEEEEeCCCC---C-----------CCCHHHHHHHhhcCCCCEEEECCCcCC
Confidence 99999 999988766544 2 112678889999999999998999976
No 440
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=96.56 E-value=0.01 Score=54.35 Aligned_cols=111 Identities=23% Similarity=0.214 Sum_probs=66.8
Q ss_pred CCcchhhHHHHHHHhhcCCCccccccccccccccccccCCCCCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCC
Q 024248 3 QPTSGANQRIARIAAHLHPPTLQIEGESSGLGRMDCRAKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (270)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~ 82 (270)
-|||----|++-..|-.+ .|+.-++-...-.- +.+..+-||+|+|+ |.+|..-|..+...|- +|+.+|++.
T Consensus 131 aPMSeVAGrla~q~Ga~~-----lek~~GG~GvllgG-vpGV~~~kv~iiGG-GvvgtnaAkiA~glgA--~Vtild~n~ 201 (371)
T COG0686 131 APMSEVAGRLAAQAGAYY-----LEKTNGGKGVLLGG-VPGVLPAKVVVLGG-GVVGTNAAKIAIGLGA--DVTILDLNI 201 (371)
T ss_pred chHHHHhhhHHHHHHHHH-----HHhccCCceeEecC-CCCCCCccEEEECC-ccccchHHHHHhccCC--eeEEEecCH
Confidence 367766666655554443 12222222222222 23566779999999 9999998887775554 999999985
Q ss_pred ChhHHHHhhccccCcceee-eeccCCHHHHhCCCCEEEEcCCCC
Q 024248 83 TPGVTADISHMDTNAVVRG-FLGQQQLEDALTGMDIVIIPAGVP 125 (270)
Q Consensus 83 ~~~~~~dl~~~~~~~~~~~-i~~t~d~~~al~~ADvVIi~ag~~ 125 (270)
.+-..+|-.. ..++.. .+...+++++++.+|+||-+.=.|
T Consensus 202 ~rl~~ldd~f---~~rv~~~~st~~~iee~v~~aDlvIgaVLIp 242 (371)
T COG0686 202 DRLRQLDDLF---GGRVHTLYSTPSNIEEAVKKADLVIGAVLIP 242 (371)
T ss_pred HHHhhhhHhh---CceeEEEEcCHHHHHHHhhhccEEEEEEEec
Confidence 4322222221 222222 223346889999999999876443
No 441
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.56 E-value=0.17 Score=44.53 Aligned_cols=158 Identities=14% Similarity=0.131 Sum_probs=81.0
Q ss_pred CeEEEEcCC--CchHHHHHHHHHhCCCccEEEEEeCCCChh-HHHHhhcc-ccCccee-eeeccCCHH-------HHhCC
Q 024248 47 FKVAVLGAA--GGIGQPLAMLMKINPLVSVLHLYDVVNTPG-VTADISHM-DTNAVVR-GFLGQQQLE-------DALTG 114 (270)
Q Consensus 47 mKI~IIGa~--G~VGs~la~~l~~~g~~~eV~LvD~~~~~~-~~~dl~~~-~~~~~~~-~i~~t~d~~-------~al~~ 114 (270)
+.+.|+||+ +-+|..++..|++.|. .|++.|++.... ...++... .....+. .+....+.+ +.+..
T Consensus 11 k~~lItGas~g~GIG~a~a~~la~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 88 (258)
T PRK07533 11 KRGLVVGIANEQSIAWGCARAFRALGA--ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR 88 (258)
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHcCC--EEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence 468899986 3799999999999998 999999875311 11122111 0000000 011111111 22346
Q ss_pred CCEEEEcCCCCCCC---C----Cc---hhhhHHhhHHHHHHHHHHHhHhC-CCCEEEEecCCCCCcHHHHHHHHHHhCCC
Q 024248 115 MDIVIIPAGVPRKP---G----MT---RDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVGTY 183 (270)
Q Consensus 115 ADvVIi~ag~~~~~---g----~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~sNPv~~~~~i~t~~~~~~sg~ 183 (270)
.|++|..||..... + .+ ..+.+..|+.....+++.+...- ..+.++++|..... . ..
T Consensus 89 ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~----------~--~~ 156 (258)
T PRK07533 89 LDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAE----------K--VV 156 (258)
T ss_pred CCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccc----------c--CC
Confidence 79999999864210 1 11 22345666655555555443322 23566665532221 0 12
Q ss_pred CCCCeeeechhhHHHHHHHHHHHhCCCCCccceEEEc
Q 024248 184 DPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (270)
Q Consensus 184 p~~kviG~t~ldt~r~~~~lA~~l~v~~~~v~~~V~G 220 (270)
|..-.++.++-.-..+-+.++..++ +..|++..+-
T Consensus 157 ~~~~~Y~asKaal~~l~~~la~el~--~~gI~Vn~v~ 191 (258)
T PRK07533 157 ENYNLMGPVKAALESSVRYLAAELG--PKGIRVHAIS 191 (258)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHhh--hcCcEEEEEe
Confidence 2222355555444556677777764 3345444433
No 442
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=96.54 E-value=0.029 Score=48.47 Aligned_cols=32 Identities=22% Similarity=0.329 Sum_probs=27.5
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEE-eCC
Q 024248 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLY-DVV 81 (270)
Q Consensus 48 KI~IIGa~G~VGs~la~~l~~~g~~~eV~Lv-D~~ 81 (270)
.+.|+||+|++|..++..|++.|. +|++. +++
T Consensus 3 ~~lItGa~g~iG~~l~~~l~~~g~--~v~~~~~~~ 35 (247)
T PRK09730 3 IALVTGGSRGIGRATALLLAQEGY--TVAVNYQQN 35 (247)
T ss_pred EEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCC
Confidence 589999999999999999999998 88764 444
No 443
>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=96.54 E-value=0.015 Score=54.82 Aligned_cols=71 Identities=23% Similarity=0.277 Sum_probs=42.9
Q ss_pred CeEEEEcCCCchHHHHHHHHHh-CCC-ccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKI-NPL-VSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~-~g~-~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
+||+|+||+|++|..+..+++. ..+ ..+++++......+....+... ... +....+. +.++++|+||++++
T Consensus 2 ~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg~~~~~f~g~----~~~-v~~~~~~-~~~~~~Divf~a~~ 74 (369)
T PRK06598 2 KKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAGGAAPSFGGK----EGT-LQDAFDI-DALKKLDIIITCQG 74 (369)
T ss_pred eEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhCCcccccCCC----cce-EEecCCh-hHhcCCCEEEECCC
Confidence 5899999999999999974544 444 2357787654322222222211 111 1111233 45789999999875
No 444
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=96.53 E-value=0.026 Score=49.07 Aligned_cols=37 Identities=30% Similarity=0.415 Sum_probs=32.3
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~ 82 (270)
.+..||+|+|+ |-+|+.++..|+..|. .+++++|.+.
T Consensus 26 L~~~~V~ViG~-GglGs~ia~~La~~Gv-g~i~lvD~D~ 62 (212)
T PRK08644 26 LKKAKVGIAGA-GGLGSNIAVALARSGV-GNLKLVDFDV 62 (212)
T ss_pred HhCCCEEEECc-CHHHHHHHHHHHHcCC-CeEEEEeCCE
Confidence 34558999998 9999999999999988 5899999983
No 445
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.53 E-value=0.15 Score=45.42 Aligned_cols=156 Identities=15% Similarity=0.168 Sum_probs=81.2
Q ss_pred CeEEEEcCCC--chHHHHHHHHHhCCCccEEEEEeCCCChh-HHHHhhcc-ccCccee-eeeccCCH-------HHHhCC
Q 024248 47 FKVAVLGAAG--GIGQPLAMLMKINPLVSVLHLYDVVNTPG-VTADISHM-DTNAVVR-GFLGQQQL-------EDALTG 114 (270)
Q Consensus 47 mKI~IIGa~G--~VGs~la~~l~~~g~~~eV~LvD~~~~~~-~~~dl~~~-~~~~~~~-~i~~t~d~-------~~al~~ 114 (270)
..+.|+||++ -+|..+|..|+..|. .|++.++++... ...++... .....+. .+....+. .+.+..
T Consensus 8 k~~lVTGas~~~GIG~aiA~~la~~Ga--~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 85 (271)
T PRK06505 8 KRGLIMGVANDHSIAWGIAKQLAAQGA--ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK 85 (271)
T ss_pred CEEEEeCCCCCCcHHHHHHHHHHhCCC--EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 3688999964 799999999999998 999998864211 11222211 0000000 01111111 122346
Q ss_pred CCEEEEcCCCCCCC-------CCch---hhhHHhhHHHHHHHHHHHhHhC-CCCEEEEecCCCCCcHHHHHHHHHHhCCC
Q 024248 115 MDIVIIPAGVPRKP-------GMTR---DDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVGTY 183 (270)
Q Consensus 115 ADvVIi~ag~~~~~-------g~~r---~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~sNPv~~~~~i~t~~~~~~sg~ 183 (270)
.|++|..||..... ..+. ...+..|+.....+++.+..+- ..+.|+++|..... . +.
T Consensus 86 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~----------~--~~ 153 (271)
T PRK06505 86 LDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGST----------R--VM 153 (271)
T ss_pred CCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCcc----------c--cC
Confidence 89999999864311 1111 2234556554444444333221 23666666543221 0 23
Q ss_pred CCCCeeeechhhHHHHHHHHHHHhCCCCCccceEE
Q 024248 184 DPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPV 218 (270)
Q Consensus 184 p~~kviG~t~ldt~r~~~~lA~~l~v~~~~v~~~V 218 (270)
|..-.++.++-.-..+-+.+|.+++ +..|++..
T Consensus 154 ~~~~~Y~asKaAl~~l~r~la~el~--~~gIrVn~ 186 (271)
T PRK06505 154 PNYNVMGVAKAALEASVRYLAADYG--PQGIRVNA 186 (271)
T ss_pred CccchhhhhHHHHHHHHHHHHHHHh--hcCeEEEE
Confidence 3333466665555567788888874 34454433
No 446
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.50 E-value=0.08 Score=47.10 Aligned_cols=158 Identities=13% Similarity=0.175 Sum_probs=82.6
Q ss_pred CeEEEEcCCC--chHHHHHHHHHhCCCccEEEEEeCCCC-hhHHHHhhccccCcc-ee-eeeccCCHHH-------HhCC
Q 024248 47 FKVAVLGAAG--GIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTNAV-VR-GFLGQQQLED-------ALTG 114 (270)
Q Consensus 47 mKI~IIGa~G--~VGs~la~~l~~~g~~~eV~LvD~~~~-~~~~~dl~~~~~~~~-~~-~i~~t~d~~~-------al~~ 114 (270)
+.+.|+||++ -+|..++..|++.|. .|++.+++.. .....++........ +. .+....++++ .+..
T Consensus 7 k~~lITGas~~~GIG~aia~~la~~G~--~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 84 (262)
T PRK07984 7 KRILVTGVASKLSIAYGIAQAMHREGA--ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK 84 (262)
T ss_pred CEEEEeCCCCCccHHHHHHHHHHHCCC--EEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence 4689999853 699999999999998 8999988632 122223322100000 00 0111111221 1234
Q ss_pred CCEEEEcCCCCCCC--------CCchh---hhHHhhHHHHHHHHHHHhHh-CCCCEEEEecCCCCCcHHHHHHHHHHhCC
Q 024248 115 MDIVIIPAGVPRKP--------GMTRD---DLFNINAGIVKTLCEGIAKC-CPKAIVNLISNPVNSTVPIAAEVFKKVGT 182 (270)
Q Consensus 115 ADvVIi~ag~~~~~--------g~~r~---~~~~~N~~i~~~i~~~i~~~-~p~a~viv~sNPv~~~~~i~t~~~~~~sg 182 (270)
.|++|..+|..... ..+.. ..+..|+.....+.+.+... .+.+.|+++|.-... ..
T Consensus 85 iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~------------~~ 152 (262)
T PRK07984 85 FDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAE------------RA 152 (262)
T ss_pred CCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCC------------CC
Confidence 79999999864211 11111 22345655443444443322 234667666643220 01
Q ss_pred CCCCCeeeechhhHHHHHHHHHHHhCCCCCccceEEEc
Q 024248 183 YDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (270)
Q Consensus 183 ~p~~kviG~t~ldt~r~~~~lA~~l~v~~~~v~~~V~G 220 (270)
.|..-.++.++..-..+-+.+|..++ +..|++..+-
T Consensus 153 ~~~~~~Y~asKaal~~l~~~la~el~--~~gIrVn~i~ 188 (262)
T PRK07984 153 IPNYNVMGLAKASLEANVRYMANAMG--PEGVRVNAIS 188 (262)
T ss_pred CCCcchhHHHHHHHHHHHHHHHHHhc--ccCcEEeeee
Confidence 23333466666555667888888874 4456554444
No 447
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=96.50 E-value=0.01 Score=50.99 Aligned_cols=76 Identities=21% Similarity=0.252 Sum_probs=51.0
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEc
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIP 121 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ 121 (270)
....+|+|||.+..||..++.+|+.++. .|+++|++.-.- ....+.|..+ .... .+.++.+.++.||+||.+
T Consensus 60 l~GK~vvVIGrS~iVGkPla~lL~~~~A--tVti~~~~~~~~~~~~~~~~hs~t--~~~~--~~~~l~~~~~~ADIVIsA 133 (197)
T cd01079 60 LYGKTITIINRSEVVGRPLAALLANDGA--RVYSVDINGIQVFTRGESIRHEKH--HVTD--EEAMTLDCLSQSDVVITG 133 (197)
T ss_pred CCCCEEEEECCCccchHHHHHHHHHCCC--EEEEEecCcccccccccccccccc--cccc--hhhHHHHHhhhCCEEEEc
Confidence 4456999999999999999999999887 999999864210 0111112110 0000 011266788999999999
Q ss_pred CCCC
Q 024248 122 AGVP 125 (270)
Q Consensus 122 ag~~ 125 (270)
+|.+
T Consensus 134 vG~~ 137 (197)
T cd01079 134 VPSP 137 (197)
T ss_pred cCCC
Confidence 9866
No 448
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=96.49 E-value=0.024 Score=43.67 Aligned_cols=91 Identities=19% Similarity=0.204 Sum_probs=56.6
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeec-cCC---HHH-HhCCCCEEEEcCC
Q 024248 49 VAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLG-QQQ---LED-ALTGMDIVIIPAG 123 (270)
Q Consensus 49 I~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~-t~d---~~~-al~~ADvVIi~ag 123 (270)
|.|+|. |.+|..++..|...+. +|+++|.++.. ...+.... .. .+.+ .++ +++ .+++||.||++.+
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~--~vvvid~d~~~--~~~~~~~~-~~---~i~gd~~~~~~l~~a~i~~a~~vv~~~~ 71 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGI--DVVVIDRDPER--VEELREEG-VE---VIYGDATDPEVLERAGIEKADAVVILTD 71 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTS--EEEEEESSHHH--HHHHHHTT-SE---EEES-TTSHHHHHHTTGGCESEEEEESS
T ss_pred eEEEcC-CHHHHHHHHHHHhCCC--EEEEEECCcHH--HHHHHhcc-cc---cccccchhhhHHhhcCccccCEEEEccC
Confidence 679998 9999999999999776 99999998542 22222111 01 1111 112 222 4679999999853
Q ss_pred CCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEec
Q 024248 124 VPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163 (270)
Q Consensus 124 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~s 163 (270)
. + ..| ..++..+++..|+..++...
T Consensus 72 ~---------d--~~n----~~~~~~~r~~~~~~~ii~~~ 96 (116)
T PF02254_consen 72 D---------D--EEN----LLIALLARELNPDIRIIARV 96 (116)
T ss_dssp S---------H--HHH----HHHHHHHHHHTTTSEEEEEE
T ss_pred C---------H--HHH----HHHHHHHHHHCCCCeEEEEE
Confidence 1 1 334 45667778888887666554
No 449
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.49 E-value=0.18 Score=44.03 Aligned_cols=33 Identities=18% Similarity=0.179 Sum_probs=29.3
Q ss_pred CeEEEEcCCC--chHHHHHHHHHhCCCccEEEEEeCC
Q 024248 47 FKVAVLGAAG--GIGQPLAMLMKINPLVSVLHLYDVV 81 (270)
Q Consensus 47 mKI~IIGa~G--~VGs~la~~l~~~g~~~eV~LvD~~ 81 (270)
.+|.|+||+| .+|..++..|+.+|. +|++++++
T Consensus 6 k~vlItGas~~~giG~~la~~l~~~G~--~vi~~~r~ 40 (256)
T PRK12748 6 KIALVTGASRLNGIGAAVCRRLAAKGI--DIFFTYWS 40 (256)
T ss_pred cEEEEeCCCCCCCHHHHHHHHHHHcCC--cEEEEcCC
Confidence 4799999974 699999999999998 99999876
No 450
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.48 E-value=0.16 Score=46.31 Aligned_cols=115 Identities=17% Similarity=0.288 Sum_probs=69.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCC--hhHHHHhhccc-cCcceeeeec-------cCCHHHHhCCC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMD-TNAVVRGFLG-------QQQLEDALTGM 115 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~--~~~~~dl~~~~-~~~~~~~i~~-------t~d~~~al~~A 115 (270)
.-.|.|+||++-+|..+|..++++|. .+++.|+++. ...+..+.+.. .....-.++. ....++.+.+.
T Consensus 38 g~~vLITGgg~GlGr~ialefa~rg~--~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V 115 (300)
T KOG1201|consen 38 GEIVLITGGGSGLGRLIALEFAKRGA--KLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGDV 115 (300)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHhCC--eEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCCc
Confidence 34799999988999999999999998 9999999874 11222232210 0000000110 11245567899
Q ss_pred CEEEEcCCCCC-CCC--Cchhh---hHHhh----HHHHHHHHHHHhHhCCCCEEEEec
Q 024248 116 DIVIIPAGVPR-KPG--MTRDD---LFNIN----AGIVKTLCEGIAKCCPKAIVNLIS 163 (270)
Q Consensus 116 DvVIi~ag~~~-~~g--~~r~~---~~~~N----~~i~~~i~~~i~~~~p~a~viv~s 163 (270)
|++|..||... ++- .++.+ .++.| ...++++++.+.+. +++.|+.++
T Consensus 116 ~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~-~~GHIV~Ia 172 (300)
T KOG1201|consen 116 DILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLEN-NNGHIVTIA 172 (300)
T ss_pred eEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhc-CCceEEEeh
Confidence 99999998642 221 12211 22333 35678899999875 466665554
No 451
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.47 E-value=0.23 Score=43.78 Aligned_cols=34 Identities=15% Similarity=0.090 Sum_probs=30.1
Q ss_pred CeEEEEcC--CCchHHHHHHHHHhCCCccEEEEEeCCC
Q 024248 47 FKVAVLGA--AGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (270)
Q Consensus 47 mKI~IIGa--~G~VGs~la~~l~~~g~~~eV~LvD~~~ 82 (270)
+.++|+|+ ++-+|..++..|+..|. .|++.|++.
T Consensus 8 k~~lItGa~~s~GIG~a~a~~la~~G~--~v~l~~r~~ 43 (256)
T PRK07889 8 KRILVTGVITDSSIAFHVARVAQEQGA--EVVLTGFGR 43 (256)
T ss_pred CEEEEeCCCCcchHHHHHHHHHHHCCC--EEEEecCcc
Confidence 47999998 68999999999999998 999998764
No 452
>PRK06932 glycerate dehydrogenase; Provisional
Probab=96.47 E-value=0.011 Score=54.42 Aligned_cols=89 Identities=19% Similarity=0.247 Sum_probs=59.2
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
...++|+|+|. |.||..++..+...|. +|..+|..... +.. . ...++++.++.||+|++...
T Consensus 145 l~gktvgIiG~-G~IG~~va~~l~~fg~--~V~~~~~~~~~----~~~-~----------~~~~l~ell~~sDiv~l~~P 206 (314)
T PRK06932 145 VRGSTLGVFGK-GCLGTEVGRLAQALGM--KVLYAEHKGAS----VCR-E----------GYTPFEEVLKQADIVTLHCP 206 (314)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHhcCCC--EEEEECCCccc----ccc-c----------ccCCHHHHHHhCCEEEEcCC
Confidence 34569999997 9999999999988888 99999864210 000 0 11368899999999999863
Q ss_pred CCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEec
Q 024248 124 VPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163 (270)
Q Consensus 124 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~s 163 (270)
... .++ .++ | .+.+..+ .|++++||++
T Consensus 207 lt~---~T~-~li--~----~~~l~~m---k~ga~lIN~a 233 (314)
T PRK06932 207 LTE---TTQ-NLI--N----AETLALM---KPTAFLINTG 233 (314)
T ss_pred CCh---HHh-ccc--C----HHHHHhC---CCCeEEEECC
Confidence 221 111 111 1 2333443 4789999987
No 453
>PRK07041 short chain dehydrogenase; Provisional
Probab=96.47 E-value=0.016 Score=49.75 Aligned_cols=110 Identities=12% Similarity=0.134 Sum_probs=61.3
Q ss_pred EEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--HHHHhhccccCccee--eeeccCCHHHHhC---CCCEEEEcC
Q 024248 50 AVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAVVR--GFLGQQQLEDALT---GMDIVIIPA 122 (270)
Q Consensus 50 ~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~~~dl~~~~~~~~~~--~i~~t~d~~~al~---~ADvVIi~a 122 (270)
.|+||+|.+|..++..|+++|. +|++++++.... ...++... ...... .+....+++++++ ..|++|..+
T Consensus 1 lItGas~~iG~~~a~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~a 77 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGA--RVTIASRSRDRLAAAARALGGG-APVRTAALDITDEAAVDAFFAEAGPFDHVVITA 77 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHhcC-CceEEEEccCCCHHHHHHHHHhcCCCCEEEECC
Confidence 3899999999999999999998 999999874321 11222111 011000 0111122333333 479999998
Q ss_pred CCCCCCC---C---chhhhHHhhHHHHHHHHHHHhHhCCCCEEEEec
Q 024248 123 GVPRKPG---M---TRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163 (270)
Q Consensus 123 g~~~~~g---~---~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~s 163 (270)
|...... . ...+.+..|+.....+.+.. .....+.++++|
T Consensus 78 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~-~~~~~g~iv~~s 123 (230)
T PRK07041 78 ADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAA-RIAPGGSLTFVS 123 (230)
T ss_pred CCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhh-hhcCCeEEEEEC
Confidence 8642210 1 12234566766666666632 223345565554
No 454
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=96.46 E-value=0.011 Score=54.42 Aligned_cols=90 Identities=21% Similarity=0.232 Sum_probs=60.0
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
...++|+|+|- |.||..+|..+...|. +|..||+.... . +. .+. ..++++.++.||+|++...
T Consensus 143 L~gktvGIiG~-G~IG~~vA~~~~~fgm--~V~~~d~~~~~---~---~~----~~~----~~~l~ell~~sDvv~lh~P 205 (311)
T PRK08410 143 IKGKKWGIIGL-GTIGKRVAKIAQAFGA--KVVYYSTSGKN---K---NE----EYE----RVSLEELLKTSDIISIHAP 205 (311)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHhhcCC--EEEEECCCccc---c---cc----Cce----eecHHHHhhcCCEEEEeCC
Confidence 44568999997 9999999999988888 99999984211 0 00 001 1368889999999999863
Q ss_pred CCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEec
Q 024248 124 VPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163 (270)
Q Consensus 124 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~s 163 (270)
... .++ .++ | .+.++.+ .|++++||++
T Consensus 206 lt~---~T~-~li--~----~~~~~~M---k~~a~lIN~a 232 (311)
T PRK08410 206 LNE---KTK-NLI--A----YKELKLL---KDGAILINVG 232 (311)
T ss_pred CCc---hhh-ccc--C----HHHHHhC---CCCeEEEECC
Confidence 221 111 111 1 2333444 4889999997
No 455
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.46 E-value=0.011 Score=49.53 Aligned_cols=56 Identities=30% Similarity=0.503 Sum_probs=44.4
Q ss_pred CCCCeEEEEcCCCc-hHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcC
Q 024248 44 SPGFKVAVLGAAGG-IGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (270)
Q Consensus 44 ~~~mKI~IIGa~G~-VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~a 122 (270)
-...||+|+|+ |. +|..++..|..+|. +|+++++.. .++.+.+++||+||.+.
T Consensus 42 l~gk~vlViG~-G~~~G~~~a~~L~~~g~--~V~v~~r~~-----------------------~~l~~~l~~aDiVIsat 95 (168)
T cd01080 42 LAGKKVVVVGR-SNIVGKPLAALLLNRNA--TVTVCHSKT-----------------------KNLKEHTKQADIVIVAV 95 (168)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHhhCCC--EEEEEECCc-----------------------hhHHHHHhhCCEEEEcC
Confidence 34469999998 86 58889999998887 788888641 24567789999999998
Q ss_pred CCC
Q 024248 123 GVP 125 (270)
Q Consensus 123 g~~ 125 (270)
+.+
T Consensus 96 ~~~ 98 (168)
T cd01080 96 GKP 98 (168)
T ss_pred CCC
Confidence 765
No 456
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.44 E-value=0.0093 Score=54.18 Aligned_cols=57 Identities=21% Similarity=0.354 Sum_probs=47.0
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
....+|+|||.||.||..++..|+..|. .|+++.. .|.++++.+++||+||.++|
T Consensus 156 l~Gk~v~vIG~S~ivG~Pla~lL~~~ga--tVtv~~s-----------------------~t~~l~~~~~~ADIVI~avg 210 (284)
T PRK14179 156 LEGKHAVVIGRSNIVGKPMAQLLLDKNA--TVTLTHS-----------------------RTRNLAEVARKADILVVAIG 210 (284)
T ss_pred CCCCEEEEECCCCcCcHHHHHHHHHCCC--EEEEECC-----------------------CCCCHHHHHhhCCEEEEecC
Confidence 4457999999999999999999999998 8887722 12357788999999999987
Q ss_pred CC
Q 024248 124 VP 125 (270)
Q Consensus 124 ~~ 125 (270)
.+
T Consensus 211 ~~ 212 (284)
T PRK14179 211 RG 212 (284)
T ss_pred cc
Confidence 66
No 457
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.43 E-value=0.012 Score=53.60 Aligned_cols=57 Identities=19% Similarity=0.382 Sum_probs=46.3
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
.+..+|+|+|.++.||..++..|..++. .|+.++.+ |.++++.+++||+||.++|
T Consensus 156 l~Gk~vvVIGrs~~VG~pla~lL~~~ga--tVtv~~s~-----------------------t~~l~~~~~~ADIVIsAvg 210 (286)
T PRK14175 156 LEGKNAVVIGRSHIVGQPVSKLLLQKNA--SVTILHSR-----------------------SKDMASYLKDADVIVSAVG 210 (286)
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCC--eEEEEeCC-----------------------chhHHHHHhhCCEEEECCC
Confidence 4457999999955599999999998887 88888652 2356678999999999998
Q ss_pred CC
Q 024248 124 VP 125 (270)
Q Consensus 124 ~~ 125 (270)
.+
T Consensus 211 ~p 212 (286)
T PRK14175 211 KP 212 (286)
T ss_pred CC
Confidence 65
No 458
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=96.42 E-value=0.011 Score=55.01 Aligned_cols=37 Identities=22% Similarity=0.215 Sum_probs=32.7
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~ 82 (270)
.+..||+|+|+ |-+|+.++..|+..|+ ++++++|.+.
T Consensus 22 L~~~~VlIiG~-GglGs~va~~La~aGv-g~i~lvD~D~ 58 (338)
T PRK12475 22 IREKHVLIVGA-GALGAANAEALVRAGI-GKLTIADRDY 58 (338)
T ss_pred hcCCcEEEECC-CHHHHHHHHHHHHcCC-CEEEEEcCCc
Confidence 44568999998 9999999999999997 5999999984
No 459
>PRK08303 short chain dehydrogenase; Provisional
Probab=96.39 E-value=0.086 Score=48.09 Aligned_cols=35 Identities=20% Similarity=0.216 Sum_probs=31.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~ 82 (270)
.+.+.|+||++.+|..++..|+..|. .|++++++.
T Consensus 8 ~k~~lITGgs~GIG~aia~~la~~G~--~Vv~~~r~~ 42 (305)
T PRK08303 8 GKVALVAGATRGAGRGIAVELGAAGA--TVYVTGRST 42 (305)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeccc
Confidence 34789999999999999999999998 999999873
No 460
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=96.39 E-value=0.042 Score=55.27 Aligned_cols=137 Identities=16% Similarity=0.186 Sum_probs=81.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCH---H-HHhCCCCEEEEc
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQL---E-DALTGMDIVIIP 121 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~---~-~al~~ADvVIi~ 121 (270)
..+|.|+|. |.+|..++..|..++. +++++|.|++.. ..+.+.. ..-+. -..++. + ..+.+||.||++
T Consensus 400 ~~~vII~G~-Gr~G~~va~~L~~~g~--~vvvID~d~~~v--~~~~~~g-~~v~~--GDat~~~~L~~agi~~A~~vvv~ 471 (621)
T PRK03562 400 QPRVIIAGF-GRFGQIVGRLLLSSGV--KMTVLDHDPDHI--ETLRKFG-MKVFY--GDATRMDLLESAGAAKAEVLINA 471 (621)
T ss_pred cCcEEEEec-ChHHHHHHHHHHhCCC--CEEEEECCHHHH--HHHHhcC-CeEEE--EeCCCHHHHHhcCCCcCCEEEEE
Confidence 358999998 9999999999999998 999999986432 2222211 11111 111222 2 235689999998
Q ss_pred CCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEec-CCCCCcHHHHHHHHHHhCCCCCCCeeeechhhHHHHH
Q 024248 122 AGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS-NPVNSTVPIAAEVFKKVGTYDPKRLLGVTMLDVVRAN 200 (270)
Q Consensus 122 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~s-NPv~~~~~i~t~~~~~~sg~p~~kviG~t~ldt~r~~ 200 (270)
.... +.| ..++..+++..|+..++.-+ ++.+ .+.+.+. |. +.++--+...+.++-
T Consensus 472 ~~d~-----------~~n----~~i~~~ar~~~p~~~iiaRa~d~~~------~~~L~~~-Ga--d~v~~e~~e~sl~l~ 527 (621)
T PRK03562 472 IDDP-----------QTS----LQLVELVKEHFPHLQIIARARDVDH------YIRLRQA-GV--EKPERETFEGALKSG 527 (621)
T ss_pred eCCH-----------HHH----HHHHHHHHHhCCCCeEEEEECCHHH------HHHHHHC-CC--CEEehhhHhHHHHHH
Confidence 5211 334 34666777778987665544 4433 2233332 32 334333444455566
Q ss_pred HHHHHHhCCCCCcc
Q 024248 201 TFVAEVLGLDPREV 214 (270)
Q Consensus 201 ~~lA~~l~v~~~~v 214 (270)
+.+-+.+|+++.++
T Consensus 528 ~~~L~~lg~~~~~~ 541 (621)
T PRK03562 528 RLVLESLGLGPYEA 541 (621)
T ss_pred HHHHHHcCCCHHHH
Confidence 66667777777665
No 461
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.38 E-value=0.032 Score=53.43 Aligned_cols=122 Identities=23% Similarity=0.282 Sum_probs=68.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhH---HHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV---TADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~---~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~a 122 (270)
.++|.|+|+ |.+|..+|..|+..|+ +|+++|.+..... ..++... .+..+. .....+...++|+||.++
T Consensus 5 ~k~v~iiG~-g~~G~~~A~~l~~~G~--~V~~~d~~~~~~~~~~~~~l~~~----~~~~~~-~~~~~~~~~~~d~vv~~~ 76 (450)
T PRK14106 5 GKKVLVVGA-GVSGLALAKFLKKLGA--KVILTDEKEEDQLKEALEELGEL----GIELVL-GEYPEEFLEGVDLVVVSP 76 (450)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCchHHHHHHHHHHHhc----CCEEEe-CCcchhHhhcCCEEEECC
Confidence 458999998 8899999999999999 9999999752211 1223211 111111 111224457899999998
Q ss_pred CCCCCCCCchhhh-HHhhHHHHHHHHHHHhHhCCCCEEEEecCCCC--CcHHHHHHHHHH
Q 024248 123 GVPRKPGMTRDDL-FNINAGIVKTLCEGIAKCCPKAIVNLISNPVN--STVPIAAEVFKK 179 (270)
Q Consensus 123 g~~~~~g~~r~~~-~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~--~~~~i~t~~~~~ 179 (270)
|.+.. ...... -+.+++++.......+. .+ ..+|-+|.... +++.+++.++..
T Consensus 77 g~~~~--~~~~~~a~~~~i~~~~~~~~~~~~-~~-~~vI~ITGS~GKTTt~~~l~~iL~~ 132 (450)
T PRK14106 77 GVPLD--SPPVVQAHKKGIEVIGEVELAYRF-SK-APIVAITGTNGKTTTTTLLGEIFKN 132 (450)
T ss_pred CCCCC--CHHHHHHHHCCCcEEeHHHHHHhh-cC-CCEEEEeCCCchHHHHHHHHHHHHH
Confidence 86532 111111 12344444444433332 23 34555654433 233666666654
No 462
>PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=96.38 E-value=0.025 Score=54.06 Aligned_cols=63 Identities=22% Similarity=0.356 Sum_probs=47.5
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~a 122 (270)
-..++|+|+|. |.||..+|..+...|+ +|..||+.... ... .. ....++++.++.||+|++..
T Consensus 149 L~gktvGIiG~-G~IG~~vA~~~~~fGm--~V~~~d~~~~~----~~~------~~---~~~~~l~ell~~sDiVslh~ 211 (409)
T PRK11790 149 VRGKTLGIVGY-GHIGTQLSVLAESLGM--RVYFYDIEDKL----PLG------NA---RQVGSLEELLAQSDVVSLHV 211 (409)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEECCCccc----ccC------Cc---eecCCHHHHHhhCCEEEEcC
Confidence 44568999997 9999999999998888 99999974211 000 00 11236889999999999986
No 463
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.37 E-value=0.013 Score=53.28 Aligned_cols=57 Identities=23% Similarity=0.410 Sum_probs=45.1
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
.+..+|+|+|++|.+|..++..|+..|. .|+++++. +.++++.+++||+||.+.|
T Consensus 157 l~Gk~vvViG~gg~vGkpia~~L~~~ga--tVtv~~~~-----------------------t~~L~~~~~~aDIvI~AtG 211 (283)
T PRK14192 157 LAGKHAVVVGRSAILGKPMAMMLLNANA--TVTICHSR-----------------------TQNLPELVKQADIIVGAVG 211 (283)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCC--EEEEEeCC-----------------------chhHHHHhccCCEEEEccC
Confidence 4456999999955699999999998887 89988752 1245567799999999986
Q ss_pred CC
Q 024248 124 VP 125 (270)
Q Consensus 124 ~~ 125 (270)
.+
T Consensus 212 ~~ 213 (283)
T PRK14192 212 KP 213 (283)
T ss_pred CC
Confidence 43
No 464
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=96.37 E-value=0.052 Score=59.08 Aligned_cols=118 Identities=12% Similarity=0.022 Sum_probs=69.2
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCC--CccEEEEEeCCCChhHH-HHhhcc---------ccCcceeeee---------
Q 024248 45 PGFKVAVLGAAGGIGQPLAMLMKINP--LVSVLHLYDVVNTPGVT-ADISHM---------DTNAVVRGFL--------- 103 (270)
Q Consensus 45 ~~mKI~IIGa~G~VGs~la~~l~~~g--~~~eV~LvD~~~~~~~~-~dl~~~---------~~~~~~~~i~--------- 103 (270)
.+++|.|+|++||+|++++..|+.++ ...+|+++.+....... ..+.+. .....+..+.
T Consensus 970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443 970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence 35789999999999999999888776 22377777775421111 111100 0000111111
Q ss_pred -ccCCHHHHhCCCCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEec
Q 024248 104 -GQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163 (270)
Q Consensus 104 -~t~d~~~al~~ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~s 163 (270)
....+++...++|+||++|+... .......+...|+..+.++++.+.+.....++.+.|
T Consensus 1050 l~~~~~~~l~~~~d~iiH~Aa~~~-~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS 1109 (1389)
T TIGR03443 1050 LSDEKWSDLTNEVDVIIHNGALVH-WVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSS 1109 (1389)
T ss_pred cCHHHHHHHHhcCCEEEECCcEec-CccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeC
Confidence 01124455678999999987542 122333444579999999999988654443333333
No 465
>KOG2711 consensus Glycerol-3-phosphate dehydrogenase/dihydroxyacetone 3-phosphate reductase [Energy production and conversion]
Probab=96.32 E-value=0.079 Score=49.08 Aligned_cols=127 Identities=16% Similarity=0.295 Sum_probs=74.3
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhC----C-CccEEEEEeCCCC-hh---HHHHhhccc---c-C-cc--ee-eeecc
Q 024248 43 GSPGFKVAVLGAAGGIGQPLAMLMKIN----P-LVSVLHLYDVVNT-PG---VTADISHMD---T-N-AV--VR-GFLGQ 105 (270)
Q Consensus 43 ~~~~mKI~IIGa~G~VGs~la~~l~~~----g-~~~eV~LvD~~~~-~~---~~~dl~~~~---~-~-~~--~~-~i~~t 105 (270)
...+.||+|+|+ |.=|++++..+... + +..+|...-..+. .+ ...|.-... . + +. +. .+...
T Consensus 18 ~~~~~kV~ivGs-GnWGsaiaki~~~n~~~~~~f~~~Vrmwv~ee~i~~~~~~L~eiIN~~heN~KYlpg~~lP~NvvAv 96 (372)
T KOG2711|consen 18 ERDPLKVCIVGS-GNWGSAIAKIVGENVKEFPIFDPQVRMWVFEEEINGEAEKLTEIINSRHENVKYLPGIKLPENVVAV 96 (372)
T ss_pred hcCceEEEEEcc-ChHHHHHHHHHhhhhhhccccCceeeEEEeccccCChhHHHHHHhccccccccccCCccCCCCeEec
Confidence 445679999996 99999999776542 1 1235555544332 22 122222111 0 0 11 11 13457
Q ss_pred CCHHHHhCCCCEEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhC-CCCEEEEecCCCCC-----cHHHHHHHHHH
Q 024248 106 QQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNS-----TVPIAAEVFKK 179 (270)
Q Consensus 106 ~d~~~al~~ADvVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~sNPv~~-----~~~i~t~~~~~ 179 (270)
+|+.++++|||++|+.. | .+.+.++++.|..+- |++..|-.+.-+++ ...++++++.+
T Consensus 97 ~dl~ea~~dADilvf~v--P--------------hQf~~~ic~~l~g~vk~~~~aISL~KG~e~~~~g~~i~liS~iI~~ 160 (372)
T KOG2711|consen 97 PDLVEAAKDADILVFVV--P--------------HQFIPRICEQLKGYVKPGATAISLIKGVEVGEEGPGIRLISQIIHR 160 (372)
T ss_pred chHHHHhccCCEEEEeC--C--------------hhhHHHHHHHHhcccCCCCeEEEeecceeccCCCCceeehHHHHHH
Confidence 89999999999999975 2 234466778887665 56655544322221 12257777878
Q ss_pred hCCCCCC
Q 024248 180 VGTYDPK 186 (270)
Q Consensus 180 ~sg~p~~ 186 (270)
..|.|-.
T Consensus 161 ~lgI~~~ 167 (372)
T KOG2711|consen 161 ALGIPCS 167 (372)
T ss_pred HhCCCce
Confidence 7787766
No 466
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=96.32 E-value=0.13 Score=45.33 Aligned_cols=154 Identities=16% Similarity=0.188 Sum_probs=80.2
Q ss_pred CeEEEEcCC--CchHHHHHHHHHhCCCccEEEEEeCCCChh----HHHHhhccccCc-cee-eeeccCCH-------HHH
Q 024248 47 FKVAVLGAA--GGIGQPLAMLMKINPLVSVLHLYDVVNTPG----VTADISHMDTNA-VVR-GFLGQQQL-------EDA 111 (270)
Q Consensus 47 mKI~IIGa~--G~VGs~la~~l~~~g~~~eV~LvD~~~~~~----~~~dl~~~~~~~-~~~-~i~~t~d~-------~~a 111 (270)
+.+.|+||+ +-+|..++..|+..|. +|++.+++...+ ...++....... .+. .+....+. .+.
T Consensus 7 k~~lItGas~~~GIG~aia~~la~~G~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 84 (258)
T PRK07370 7 KKALVTGIANNRSIAWGIAQQLHAAGA--ELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK 84 (258)
T ss_pred cEEEEeCCCCCCchHHHHHHHHHHCCC--EEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence 468999985 5899999999999998 888886543211 112222110000 000 01111111 122
Q ss_pred hCCCCEEEEcCCCCCC---CC----Cch---hhhHHhhHHHH----HHHHHHHhHhCCCCEEEEecCCCCCcHHHHHHHH
Q 024248 112 LTGMDIVIIPAGVPRK---PG----MTR---DDLFNINAGIV----KTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVF 177 (270)
Q Consensus 112 l~~ADvVIi~ag~~~~---~g----~~r---~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~sNPv~~~~~i~t~~~ 177 (270)
+...|++|.++|.... .+ .+. ...+..|+... +.+.+.+++ .+.|+++|.....
T Consensus 85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~---~g~Iv~isS~~~~--------- 152 (258)
T PRK07370 85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE---GGSIVTLTYLGGV--------- 152 (258)
T ss_pred cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh---CCeEEEEeccccc---------
Confidence 3468999999986421 01 111 22344554443 444444432 3667666643221
Q ss_pred HHhCCCCCCCeeeechhhHHHHHHHHHHHhCCCCCccceEEE
Q 024248 178 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVV 219 (270)
Q Consensus 178 ~~~sg~p~~kviG~t~ldt~r~~~~lA~~l~v~~~~v~~~V~ 219 (270)
.++|..-.++.++-.-..+-+.++.+++ +..|++..+
T Consensus 153 ---~~~~~~~~Y~asKaal~~l~~~la~el~--~~gI~Vn~i 189 (258)
T PRK07370 153 ---RAIPNYNVMGVAKAALEASVRYLAAELG--PKNIRVNAI 189 (258)
T ss_pred ---cCCcccchhhHHHHHHHHHHHHHHHHhC--cCCeEEEEE
Confidence 0233333456655555567778888875 445554443
No 467
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=96.32 E-value=0.011 Score=49.27 Aligned_cols=67 Identities=21% Similarity=0.269 Sum_probs=43.6
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCCC
Q 024248 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGV 124 (270)
Q Consensus 45 ~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag~ 124 (270)
..++++|+|= |.+|..+|..|...|. .|..+|+++..... -..+. + . +.+++++++.+|++|.+.|.
T Consensus 22 ~Gk~vvV~GY-G~vG~g~A~~lr~~Ga--~V~V~e~DPi~alq-A~~dG--f------~-v~~~~~a~~~adi~vtaTG~ 88 (162)
T PF00670_consen 22 AGKRVVVIGY-GKVGKGIARALRGLGA--RVTVTEIDPIRALQ-AAMDG--F------E-VMTLEEALRDADIFVTATGN 88 (162)
T ss_dssp TTSEEEEE---SHHHHHHHHHHHHTT---EEEEE-SSHHHHHH-HHHTT---------E-EE-HHHHTTT-SEEEE-SSS
T ss_pred CCCEEEEeCC-CcccHHHHHHHhhCCC--EEEEEECChHHHHH-hhhcC--c------E-ecCHHHHHhhCCEEEECCCC
Confidence 3458999998 9999999999999998 99999998643211 11221 1 1 22578999999998887664
No 468
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.31 E-value=0.34 Score=43.23 Aligned_cols=160 Identities=13% Similarity=0.133 Sum_probs=84.8
Q ss_pred CCCCeEEEEcCC--CchHHHHHHHHHhCCCccEEEEEeCCCC-hhHHHHhhcc-ccCccee-eeeccCCHH-------HH
Q 024248 44 SPGFKVAVLGAA--GGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHM-DTNAVVR-GFLGQQQLE-------DA 111 (270)
Q Consensus 44 ~~~mKI~IIGa~--G~VGs~la~~l~~~g~~~eV~LvD~~~~-~~~~~dl~~~-~~~~~~~-~i~~t~d~~-------~a 111 (270)
.+.+++.|+||+ +-+|..++..|+..|. .|++.++++. .....++... .....+. .+....+.+ +.
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~--~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 85 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGA--ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKK 85 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCC--EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHh
Confidence 334579999985 6799999999999998 9999876532 1111222111 0000000 011111111 22
Q ss_pred hCCCCEEEEcCCCCCC-----C--CCc---hhhhHHhhHHHHHHHHHHHhHhC-CCCEEEEecCCCCCcHHHHHHHHHHh
Q 024248 112 LTGMDIVIIPAGVPRK-----P--GMT---RDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKV 180 (270)
Q Consensus 112 l~~ADvVIi~ag~~~~-----~--g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~sNPv~~~~~i~t~~~~~~ 180 (270)
+...|++|..||.... + ..+ ....+..|+.....+++.+...- ..+.++++|.....
T Consensus 86 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~------------ 153 (272)
T PRK08159 86 WGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAE------------ 153 (272)
T ss_pred cCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccc------------
Confidence 3467999999986421 0 111 22345667655555555544432 24666666532220
Q ss_pred CCCCCCCeeeechhhHHHHHHHHHHHhCCCCCccceEEE
Q 024248 181 GTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVV 219 (270)
Q Consensus 181 sg~p~~kviG~t~ldt~r~~~~lA~~l~v~~~~v~~~V~ 219 (270)
.+.|..-.++.++-....+-+.++..+. +..|++..+
T Consensus 154 ~~~p~~~~Y~asKaal~~l~~~la~el~--~~gIrVn~v 190 (272)
T PRK08159 154 KVMPHYNVMGVAKAALEASVKYLAVDLG--PKNIRVNAI 190 (272)
T ss_pred cCCCcchhhhhHHHHHHHHHHHHHHHhc--ccCeEEEEe
Confidence 0233334466666555667777888774 344544433
No 469
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.31 E-value=0.014 Score=53.34 Aligned_cols=57 Identities=21% Similarity=0.404 Sum_probs=46.6
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
.+..+|+|+|.+|.+|..+|..|+..|. +|++++.. |.+++++++.||+||.+.|
T Consensus 156 ~~Gk~V~viGrs~~mG~PmA~~L~~~g~--tVtv~~~r-----------------------T~~l~e~~~~ADIVIsavg 210 (296)
T PRK14188 156 LSGLNAVVIGRSNLVGKPMAQLLLAANA--TVTIAHSR-----------------------TRDLPAVCRRADILVAAVG 210 (296)
T ss_pred CCCCEEEEEcCCcchHHHHHHHHHhCCC--EEEEECCC-----------------------CCCHHHHHhcCCEEEEecC
Confidence 4567999999889999999999999998 99888532 1135677899999999987
Q ss_pred CC
Q 024248 124 VP 125 (270)
Q Consensus 124 ~~ 125 (270)
.+
T Consensus 211 ~~ 212 (296)
T PRK14188 211 RP 212 (296)
T ss_pred Ch
Confidence 55
No 470
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=96.31 E-value=0.015 Score=54.22 Aligned_cols=34 Identities=29% Similarity=0.370 Sum_probs=26.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEE-EEEeC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVL-HLYDV 80 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV-~LvD~ 80 (270)
.+||+|+||+|++|..++..|...+.+ ++ .+.|.
T Consensus 2 m~kVaIiGAtG~vG~~l~~~L~~~p~~-elv~v~~~ 36 (343)
T PRK00436 2 MIKVGIVGASGYTGGELLRLLLNHPEV-EIVAVTSR 36 (343)
T ss_pred CeEEEEECCCCHHHHHHHHHHHcCCCc-eEEEEECc
Confidence 369999999999999999888877544 55 45653
No 471
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.29 E-value=0.015 Score=52.87 Aligned_cols=57 Identities=23% Similarity=0.366 Sum_probs=46.1
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
....+|+|+|.++.||..++.+|..++. .|++++. .|.|+++.++.||+||.++|
T Consensus 156 l~Gk~vvViGrs~iVGkPla~lL~~~~a--tVt~~hs-----------------------~t~~l~~~~~~ADIVV~avG 210 (285)
T PRK14189 156 LRGAHAVVIGRSNIVGKPMAMLLLQAGA--TVTICHS-----------------------KTRDLAAHTRQADIVVAAVG 210 (285)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCC--EEEEecC-----------------------CCCCHHHHhhhCCEEEEcCC
Confidence 3457999999988889999999998887 8877532 14577788999999999998
Q ss_pred CC
Q 024248 124 VP 125 (270)
Q Consensus 124 ~~ 125 (270)
.+
T Consensus 211 ~~ 212 (285)
T PRK14189 211 KR 212 (285)
T ss_pred Cc
Confidence 54
No 472
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.28 E-value=0.029 Score=48.28 Aligned_cols=37 Identities=24% Similarity=0.416 Sum_probs=32.4
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~ 82 (270)
.+..||+|+|+ |-+|+.++..|+..|. ++++++|.+.
T Consensus 19 l~~~~VlviG~-GglGs~ia~~La~~Gv-~~i~lvD~d~ 55 (202)
T TIGR02356 19 LLNSHVLIIGA-GGLGSPAALYLAGAGV-GTIVIVDDDH 55 (202)
T ss_pred hcCCCEEEECC-CHHHHHHHHHHHHcCC-CeEEEecCCE
Confidence 44568999998 9999999999999987 5999999883
No 473
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=96.27 E-value=0.058 Score=42.21 Aligned_cols=72 Identities=25% Similarity=0.323 Sum_probs=39.6
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEE-eCCCChhHHHHhhccccC-cceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLY-DVVNTPGVTADISHMDTN-AVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 48 KI~IIGa~G~VGs~la~~l~~~g~~~eV~Lv-D~~~~~~~~~dl~~~~~~-~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
||+|+|++|.+|..++..+...+.+ +++.+ +++...+......+.... .....+ ...+++ ..++|+||++.+
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~~~~-~l~av~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~DvV~~~~~ 74 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPDF-EVVALAASARSAGKRVSEAGPHLKGEVVLEL-EPEDFE--ELAVDIVFLALP 74 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcCCCc-eEEEEEechhhcCcCHHHHCccccccccccc-ccCChh--hcCCCEEEEcCC
Confidence 6899998799999999888885333 55555 654322221111111000 000001 113442 358999999863
No 474
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=96.27 E-value=0.0034 Score=52.41 Aligned_cols=38 Identities=37% Similarity=0.359 Sum_probs=31.5
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCC
Q 024248 42 GGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (270)
Q Consensus 42 ~~~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~ 82 (270)
.+.++.||+|+|+ |.+|...+..+...|. +++.+|...
T Consensus 16 ~~~~p~~vvv~G~-G~vg~gA~~~~~~lGa--~v~~~d~~~ 53 (168)
T PF01262_consen 16 GGVPPAKVVVTGA-GRVGQGAAEIAKGLGA--EVVVPDERP 53 (168)
T ss_dssp TEE-T-EEEEEST-SHHHHHHHHHHHHTT---EEEEEESSH
T ss_pred CCCCCeEEEEECC-CHHHHHHHHHHhHCCC--EEEeccCCH
Confidence 4667789999998 9999999999999898 999999874
No 475
>PLN02306 hydroxypyruvate reductase
Probab=96.27 E-value=0.034 Score=52.73 Aligned_cols=103 Identities=22% Similarity=0.280 Sum_probs=60.4
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHH-hCCCccEEEEEeCCCChhHH---HHhhc---cccCcceeeeeccCCHHHHhCCCC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMK-INPLVSVLHLYDVVNTPGVT---ADISH---MDTNAVVRGFLGQQQLEDALTGMD 116 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~-~~g~~~eV~LvD~~~~~~~~---~dl~~---~~~~~~~~~i~~t~d~~~al~~AD 116 (270)
...++|+|+|. |.||+.+|..+. ..|. +|..||+....... ..+.. ........ +....++++.++.||
T Consensus 163 L~gktvGIiG~-G~IG~~vA~~l~~~fGm--~V~~~d~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~L~ell~~sD 238 (386)
T PLN02306 163 LKGQTVGVIGA-GRIGSAYARMMVEGFKM--NLIYYDLYQSTRLEKFVTAYGQFLKANGEQPVT-WKRASSMEEVLREAD 238 (386)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhcCCC--EEEEECCCCchhhhhhhhhhccccccccccccc-ccccCCHHHHHhhCC
Confidence 44568999997 999999999875 6677 99999986421110 01100 00000000 111347899999999
Q ss_pred EEEEcCCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEec
Q 024248 117 IVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163 (270)
Q Consensus 117 vVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~s 163 (270)
+|++.+... + .++ .++ | .+.++.| .|++++||++
T Consensus 239 iV~lh~Plt--~-~T~-~li--n----~~~l~~M---K~ga~lIN~a 272 (386)
T PLN02306 239 VISLHPVLD--K-TTY-HLI--N----KERLALM---KKEAVLVNAS 272 (386)
T ss_pred EEEEeCCCC--h-hhh-hhc--C----HHHHHhC---CCCeEEEECC
Confidence 999975321 1 111 111 1 2333343 3789999987
No 476
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=96.26 E-value=0.051 Score=44.07 Aligned_cols=116 Identities=18% Similarity=0.179 Sum_probs=67.9
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh----HHHHhhccccCcceeeee-ccCC----------HHHHh
Q 024248 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG----VTADISHMDTNAVVRGFL-GQQQ----------LEDAL 112 (270)
Q Consensus 48 KI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~----~~~dl~~~~~~~~~~~i~-~t~d----------~~~al 112 (270)
.+.|+||+|-+|..++..|+++|. ..|+++++++... ...++.... ..+..+. ..++ ..+..
T Consensus 2 ~~lItGa~~giG~~~a~~l~~~g~-~~v~~~~r~~~~~~~~~l~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (167)
T PF00106_consen 2 TVLITGASSGIGRALARALARRGA-RVVILTSRSEDSEGAQELIQELKAPG--AKITFIECDLSDPESIRALIEEVIKRF 78 (167)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTT-EEEEEEESSCHHHHHHHHHHHHHHTT--SEEEEEESETTSHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHhcCc-eEEEEeeecccccccccccccccccc--ccccccccccccccccccccccccccc
Confidence 588999999999999999999843 3888888872111 112232111 1111111 0111 12234
Q ss_pred CCCCEEEEcCCCCCCCCCc------hhhhHHhhHHHHHHHHHHHhHhCCCCEEEEecCCCC
Q 024248 113 TGMDIVIIPAGVPRKPGMT------RDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVN 167 (270)
Q Consensus 113 ~~ADvVIi~ag~~~~~g~~------r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~sNPv~ 167 (270)
...|++|.++|........ -...+..|+.....+.+.+.. .+.+.|+++|....
T Consensus 79 ~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~-~~~g~iv~~sS~~~ 138 (167)
T PF00106_consen 79 GPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP-QGGGKIVNISSIAG 138 (167)
T ss_dssp SSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH-HTTEEEEEEEEGGG
T ss_pred ccccccccccccccccccccccchhhhhccccccceeeeeeehhee-ccccceEEecchhh
Confidence 5889999999876521111 123456676666666666665 45677777775443
No 477
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.26 E-value=0.18 Score=44.47 Aligned_cols=157 Identities=12% Similarity=0.119 Sum_probs=82.5
Q ss_pred CeEEEEcCCC--chHHHHHHHHHhCCCccEEEEEeCCCC-hhHHHHhhcc-ccCccee-eeeccCCHH-------HHhCC
Q 024248 47 FKVAVLGAAG--GIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHM-DTNAVVR-GFLGQQQLE-------DALTG 114 (270)
Q Consensus 47 mKI~IIGa~G--~VGs~la~~l~~~g~~~eV~LvD~~~~-~~~~~dl~~~-~~~~~~~-~i~~t~d~~-------~al~~ 114 (270)
+.+.|+||++ -+|..++..|+..|. .|++.++++. .....++... .....+. .+....+.+ +.+..
T Consensus 9 k~~lITGas~~~GIG~a~a~~la~~G~--~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 86 (260)
T PRK06603 9 KKGLITGIANNMSISWAIAQLAKKHGA--ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS 86 (260)
T ss_pred cEEEEECCCCCcchHHHHHHHHHHcCC--EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4688999965 599999999999998 8999887632 1122233221 0000000 011111111 22356
Q ss_pred CCEEEEcCCCCCC-----C--CCc---hhhhHHhhHHHHHHHHHHHhHhC-CCCEEEEecCCCCCcHHHHHHHHHHhCCC
Q 024248 115 MDIVIIPAGVPRK-----P--GMT---RDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVGTY 183 (270)
Q Consensus 115 ADvVIi~ag~~~~-----~--g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~sNPv~~~~~i~t~~~~~~sg~ 183 (270)
.|++|..+|.... + ..+ ....+..|+.....+++.+...- ..+.|++++..... .+.
T Consensus 87 iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~------------~~~ 154 (260)
T PRK06603 87 FDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAE------------KVI 154 (260)
T ss_pred ccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccc------------cCC
Confidence 8999998875321 1 111 12234556555444444433221 34677777643321 023
Q ss_pred CCCCeeeechhhHHHHHHHHHHHhCCCCCccceEEE
Q 024248 184 DPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVV 219 (270)
Q Consensus 184 p~~kviG~t~ldt~r~~~~lA~~l~v~~~~v~~~V~ 219 (270)
|..-.++.++-.-..|-+.+|.+++ +..|++..+
T Consensus 155 ~~~~~Y~asKaal~~l~~~la~el~--~~gIrVn~v 188 (260)
T PRK06603 155 PNYNVMGVAKAALEASVKYLANDMG--ENNIRVNAI 188 (260)
T ss_pred CcccchhhHHHHHHHHHHHHHHHhh--hcCeEEEEE
Confidence 3333466665555667788888775 344544333
No 478
>PRK00421 murC UDP-N-acetylmuramate--L-alanine ligase; Provisional
Probab=96.25 E-value=0.05 Score=52.55 Aligned_cols=72 Identities=19% Similarity=0.335 Sum_probs=49.8
Q ss_pred CCCeEEEEcCCCchHHH-HHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 45 PGFKVAVLGAAGGIGQP-LAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 45 ~~mKI~IIGa~G~VGs~-la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
+.+||.|+|. |..|.+ +|..|...|+ +|.+.|.+... ...+|.... +..+. ..+ .+.+.++|+||.+.|
T Consensus 6 ~~~~v~viG~-G~sG~s~~a~~L~~~G~--~V~~~D~~~~~-~~~~l~~~g----i~~~~-~~~-~~~~~~~d~vv~spg 75 (461)
T PRK00421 6 RIKRIHFVGI-GGIGMSGLAEVLLNLGY--KVSGSDLKESA-VTQRLLELG----AIIFI-GHD-AENIKDADVVVYSSA 75 (461)
T ss_pred CCCEEEEEEE-chhhHHHHHHHHHhCCC--eEEEECCCCCh-HHHHHHHCC----CEEeC-CCC-HHHCCCCCEEEECCC
Confidence 3458999998 999999 7999999999 99999986542 122343221 11111 113 355789999999988
Q ss_pred CCC
Q 024248 124 VPR 126 (270)
Q Consensus 124 ~~~ 126 (270)
.+.
T Consensus 76 i~~ 78 (461)
T PRK00421 76 IPD 78 (461)
T ss_pred CCC
Confidence 874
No 479
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.25 E-value=0.016 Score=52.75 Aligned_cols=57 Identities=26% Similarity=0.433 Sum_probs=46.7
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
....+|+|+|.|..||..++.+|..++. .|+++.. .|.|+++.++.||+||.++|
T Consensus 153 l~Gk~vvViGrS~iVGkPla~lL~~~~a--TVtichs-----------------------~T~~l~~~~~~ADIvIsAvG 207 (287)
T PRK14173 153 LAGKEVVVVGRSNIVGKPLAALLLREDA--TVTLAHS-----------------------KTQDLPAVTRRADVLVVAVG 207 (287)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCC--EEEEeCC-----------------------CCCCHHHHHhhCCEEEEecC
Confidence 3457999999999999999999998876 7776632 24567788999999999998
Q ss_pred CC
Q 024248 124 VP 125 (270)
Q Consensus 124 ~~ 125 (270)
.+
T Consensus 208 kp 209 (287)
T PRK14173 208 RP 209 (287)
T ss_pred Cc
Confidence 76
No 480
>PLN02858 fructose-bisphosphate aldolase
Probab=96.24 E-value=0.026 Score=61.59 Aligned_cols=66 Identities=8% Similarity=0.106 Sum_probs=49.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
..||++||. |.+|..+|..|+..|+ +|+.||++... ..++..... ....++.++.++||+||++..
T Consensus 4 ~~~IGfIGL-G~MG~~mA~~L~~~G~--~v~v~dr~~~~--~~~l~~~Ga-------~~~~s~~e~a~~advVi~~l~ 69 (1378)
T PLN02858 4 AGVVGFVGL-DSLSFELASSLLRSGF--KVQAFEISTPL--MEKFCELGG-------HRCDSPAEAAKDAAALVVVLS 69 (1378)
T ss_pred CCeEEEEch-hHHHHHHHHHHHHCCC--eEEEEcCCHHH--HHHHHHcCC-------eecCCHHHHHhcCCEEEEEcC
Confidence 358999997 9999999999999999 99999997542 233333211 113467788999999999863
No 481
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.23 E-value=0.092 Score=45.29 Aligned_cols=71 Identities=11% Similarity=0.081 Sum_probs=45.6
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 45 ~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
+..||+|||+ |.+|...+..|...|. +|++++..... ...++.+.. .+......-. ++.+.++|+||.+.+
T Consensus 9 ~~k~vLVIGg-G~va~~ka~~Ll~~ga--~V~VIs~~~~~-~l~~l~~~~---~i~~~~~~~~-~~~l~~adlViaaT~ 79 (202)
T PRK06718 9 SNKRVVIVGG-GKVAGRRAITLLKYGA--HIVVISPELTE-NLVKLVEEG---KIRWKQKEFE-PSDIVDAFLVIAATN 79 (202)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCC--eEEEEcCCCCH-HHHHHHhCC---CEEEEecCCC-hhhcCCceEEEEcCC
Confidence 3459999998 9999999999999887 99999864322 222333221 1111111112 356899999888753
No 482
>PRK06487 glycerate dehydrogenase; Provisional
Probab=96.22 E-value=0.019 Score=53.04 Aligned_cols=88 Identities=19% Similarity=0.273 Sum_probs=59.1
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
....+|+|+|. |.||..+|..+...|+ +|..+|+..... .. ...++++.++.||+|++...
T Consensus 146 l~gktvgIiG~-G~IG~~vA~~l~~fgm--~V~~~~~~~~~~------~~----------~~~~l~ell~~sDiv~l~lP 206 (317)
T PRK06487 146 LEGKTLGLLGH-GELGGAVARLAEAFGM--RVLIGQLPGRPA------RP----------DRLPLDELLPQVDALTLHCP 206 (317)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHhhCCC--EEEEECCCCCcc------cc----------cccCHHHHHHhCCEEEECCC
Confidence 34568999997 9999999999988888 999999742110 00 01268889999999999863
Q ss_pred CCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEec
Q 024248 124 VPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163 (270)
Q Consensus 124 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~s 163 (270)
... .++ .+ -| .+.+..+ .|++++||++
T Consensus 207 lt~---~T~-~l--i~----~~~~~~m---k~ga~lIN~a 233 (317)
T PRK06487 207 LTE---HTR-HL--IG----ARELALM---KPGALLINTA 233 (317)
T ss_pred CCh---HHh-cC--cC----HHHHhcC---CCCeEEEECC
Confidence 221 111 11 12 2334444 3789999997
No 483
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.20 E-value=0.06 Score=44.60 Aligned_cols=68 Identities=10% Similarity=0.042 Sum_probs=44.3
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~a 122 (270)
.+..||+|+|| |.||...+..|+..|. +|++++..... ...++.. ..+ ....-. ++.++++|+||.+.
T Consensus 11 l~~~~vlVvGG-G~va~rka~~Ll~~ga--~V~VIsp~~~~-~l~~l~~----i~~--~~~~~~-~~dl~~a~lViaaT 78 (157)
T PRK06719 11 LHNKVVVIIGG-GKIAYRKASGLKDTGA--FVTVVSPEICK-EMKELPY----ITW--KQKTFS-NDDIKDAHLIYAAT 78 (157)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEEcCccCH-HHHhccC----cEE--EecccC-hhcCCCceEEEECC
Confidence 34568999998 9999999999999998 99999743221 2222211 111 011111 24588999998874
No 484
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=96.20 E-value=0.035 Score=44.61 Aligned_cols=112 Identities=21% Similarity=0.150 Sum_probs=63.1
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChh--H---HHHhhccccCcceeee----eccCCHHHH-------
Q 024248 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--V---TADISHMDTNAVVRGF----LGQQQLEDA------- 111 (270)
Q Consensus 48 KI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~--~---~~dl~~~~~~~~~~~i----~~t~d~~~a------- 111 (270)
++.|+|++|.+|.+++..|+++|. ..|++.++++... . ..++.... ..+..+ ....++++.
T Consensus 2 ~~li~Ga~~~iG~~~~~~l~~~g~-~~v~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 78 (180)
T smart00822 2 TYLITGGLGGLGLELARWLAERGA-RHLVLLSRSGPDAPGAAELLAELEALG--AEVTVVACDVADRAALAAALAAIPAR 78 (180)
T ss_pred EEEEEcCCChHHHHHHHHHHHhhC-CeEEEEeCCCCCCccHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 689999999999999999988875 2577777754311 1 12222111 111101 000112222
Q ss_pred hCCCCEEEEcCCCCCCCC---Cc---hhhhHHhhHHHHHHHHHHHhHhCCCCEEEEec
Q 024248 112 LTGMDIVIIPAGVPRKPG---MT---RDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163 (270)
Q Consensus 112 l~~ADvVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~s 163 (270)
....|.||+++|...... .+ ....+..|+.....+.+.+.+..+ ..++++|
T Consensus 79 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~ii~~s 135 (180)
T smart00822 79 LGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPL-DFFVLFS 135 (180)
T ss_pred cCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCc-ceEEEEc
Confidence 234699999998542111 11 123467788888888888865433 3455554
No 485
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=96.20 E-value=0.027 Score=55.77 Aligned_cols=97 Identities=9% Similarity=0.064 Sum_probs=59.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCC---HH-HHhCCCCEEEEc
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQ---LE-DALTGMDIVIIP 121 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d---~~-~al~~ADvVIi~ 121 (270)
+.+|.|+|. |.+|..++..|.++|+ +++++|.|++. ..++.+.+ ...+. -..+| ++ ..+++||.|+++
T Consensus 417 ~~hiiI~G~-G~~G~~la~~L~~~g~--~vvvId~d~~~--~~~~~~~g-~~~i~--GD~~~~~~L~~a~i~~a~~viv~ 488 (558)
T PRK10669 417 CNHALLVGY-GRVGSLLGEKLLAAGI--PLVVIETSRTR--VDELRERG-IRAVL--GNAANEEIMQLAHLDCARWLLLT 488 (558)
T ss_pred CCCEEEECC-ChHHHHHHHHHHHCCC--CEEEEECCHHH--HHHHHHCC-CeEEE--cCCCCHHHHHhcCccccCEEEEE
Confidence 358999998 9999999999999998 99999998643 22222211 11111 01112 22 235689988887
Q ss_pred CCCCCCCCCchhhhHHhhHHHHHHHHHHHhHhCCCCEEEEec-CC
Q 024248 122 AGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS-NP 165 (270)
Q Consensus 122 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~s-NP 165 (270)
.+.. .+|. .++..+++.+|+..++.-. +|
T Consensus 489 ~~~~-----------~~~~----~iv~~~~~~~~~~~iiar~~~~ 518 (558)
T PRK10669 489 IPNG-----------YEAG----EIVASAREKRPDIEIIARAHYD 518 (558)
T ss_pred cCCh-----------HHHH----HHHHHHHHHCCCCeEEEEECCH
Confidence 5211 2333 3444556667887665544 44
No 486
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=96.18 E-value=0.018 Score=53.30 Aligned_cols=67 Identities=16% Similarity=0.174 Sum_probs=48.4
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcC
Q 024248 43 GSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (270)
Q Consensus 43 ~~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~a 122 (270)
..+..+|+|||- |.+|..+|..|...|+ +|+.+|+... ..+....+. .. ..+++++++.||+|+++.
T Consensus 13 ~LkgKtVGIIG~-GsIG~amA~nL~d~G~--~ViV~~r~~~---s~~~A~~~G---~~----v~sl~Eaak~ADVV~llL 79 (335)
T PRK13403 13 LLQGKTVAVIGY-GSQGHAQAQNLRDSGV--EVVVGVRPGK---SFEVAKADG---FE----VMSVSEAVRTAQVVQMLL 79 (335)
T ss_pred hhCcCEEEEEeE-cHHHHHHHHHHHHCcC--EEEEEECcch---hhHHHHHcC---CE----ECCHHHHHhcCCEEEEeC
Confidence 345568999997 9999999999999999 9999986421 111111110 11 126789999999999986
No 487
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=96.18 E-value=0.046 Score=49.95 Aligned_cols=113 Identities=11% Similarity=0.001 Sum_probs=63.5
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCC-CccEEEEEeCCCChhH--HHHhhccccCcceee----eeccCCHHHH-------h
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGV--TADISHMDTNAVVRG----FLGQQQLEDA-------L 112 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g-~~~eV~LvD~~~~~~~--~~dl~~~~~~~~~~~----i~~t~d~~~a-------l 112 (270)
..+.|+||++.+|..++..|+.+| . .|++.+++..... ..++.... ..+.. +...++.+++ .
T Consensus 4 k~vlITGas~GIG~aia~~L~~~G~~--~V~l~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 79 (314)
T TIGR01289 4 PTVIITGASSGLGLYAAKALAATGEW--HVIMACRDFLKAEQAAKSLGMPK--DSYTIMHLDLGSLDSVRQFVQQFRESG 79 (314)
T ss_pred CEEEEECCCChHHHHHHHHHHHcCCC--EEEEEeCCHHHHHHHHHHhcCCC--CeEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 478999999999999999999999 7 9999998753221 12222110 11110 1111111111 2
Q ss_pred CCCCEEEEcCCCCCCC----CCch---hhhHHhhHHH----HHHHHHHHhHhCC-CCEEEEec
Q 024248 113 TGMDIVIIPAGVPRKP----GMTR---DDLFNINAGI----VKTLCEGIAKCCP-KAIVNLIS 163 (270)
Q Consensus 113 ~~ADvVIi~ag~~~~~----g~~r---~~~~~~N~~i----~~~i~~~i~~~~p-~a~viv~s 163 (270)
...|++|..||..... ..+. ...+..|+.. ++.+.+.+++... .+.|+++|
T Consensus 80 ~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vs 142 (314)
T TIGR01289 80 RPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVG 142 (314)
T ss_pred CCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEe
Confidence 4689999999863211 1111 2234556544 4555666654322 35666665
No 488
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=96.18 E-value=0.034 Score=51.86 Aligned_cols=37 Identities=19% Similarity=0.240 Sum_probs=32.6
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~ 82 (270)
.+..||+|+|+ |.+|+.++..|+..|. ++|+++|.+.
T Consensus 22 L~~~~VlVvG~-GglGs~va~~La~aGv-g~i~lvD~D~ 58 (339)
T PRK07688 22 LREKHVLIIGA-GALGTANAEMLVRAGV-GKVTIVDRDY 58 (339)
T ss_pred hcCCcEEEECC-CHHHHHHHHHHHHcCC-CeEEEEeCCc
Confidence 44568999998 9999999999999997 6999999974
No 489
>PRK06444 prephenate dehydrogenase; Provisional
Probab=96.18 E-value=0.01 Score=51.07 Aligned_cols=31 Identities=19% Similarity=0.357 Sum_probs=27.4
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEe
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYD 79 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD 79 (270)
|||+|||++|.+|..++..+.+.|+ +|++-+
T Consensus 1 ~~~~iiG~~G~mG~~~~~~~~~~g~--~v~~~~ 31 (197)
T PRK06444 1 MMEIIIGKNGRLGRVLCSILDDNGL--GVYIKK 31 (197)
T ss_pred CEEEEEecCCcHHHHHHHHHHhCCC--EEEECC
Confidence 7999999999999999999999998 776533
No 490
>PLN02858 fructose-bisphosphate aldolase
Probab=96.17 E-value=0.035 Score=60.62 Aligned_cols=66 Identities=15% Similarity=0.275 Sum_probs=49.6
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCCC
Q 024248 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGV 124 (270)
Q Consensus 47 mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag~ 124 (270)
+||++||. |.+|..++..|+..|+ +|+.+|++... ...+..... ....++++++++||+||++...
T Consensus 325 ~~IGfIGl-G~MG~~mA~~L~~~G~--~V~v~dr~~~~--~~~l~~~Ga-------~~~~s~~e~~~~aDvVi~~V~~ 390 (1378)
T PLN02858 325 KRIGFIGL-GAMGFGMASHLLKSNF--SVCGYDVYKPT--LVRFENAGG-------LAGNSPAEVAKDVDVLVIMVAN 390 (1378)
T ss_pred CeEEEECc-hHHHHHHHHHHHHCCC--EEEEEeCCHHH--HHHHHHcCC-------eecCCHHHHHhcCCEEEEecCC
Confidence 58999997 9999999999999999 99999987532 222332211 1134677889999999998753
No 491
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.16 E-value=0.019 Score=52.05 Aligned_cols=57 Identities=23% Similarity=0.437 Sum_probs=47.0
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
-...+|+|+|.+..||..++.+|..++. .|+.++.. |.++++.++.||+||.++|
T Consensus 156 l~Gk~vvViGrS~~VGkPla~lL~~~~A--tVt~chs~-----------------------T~~l~~~~~~ADIvIsAvG 210 (278)
T PRK14172 156 IEGKEVVVIGRSNIVGKPVAQLLLNENA--TVTICHSK-----------------------TKNLKEVCKKADILVVAIG 210 (278)
T ss_pred CCCCEEEEECCCccchHHHHHHHHHCCC--EEEEeCCC-----------------------CCCHHHHHhhCCEEEEcCC
Confidence 3457999999999999999999998886 78777531 3467778899999999998
Q ss_pred CC
Q 024248 124 VP 125 (270)
Q Consensus 124 ~~ 125 (270)
.+
T Consensus 211 kp 212 (278)
T PRK14172 211 RP 212 (278)
T ss_pred Cc
Confidence 76
No 492
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=96.16 E-value=0.017 Score=50.64 Aligned_cols=37 Identities=32% Similarity=0.420 Sum_probs=32.3
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~ 82 (270)
.+..||+|+|+ |-+|+.++..|+..|. ++++++|.+.
T Consensus 19 L~~~~VlivG~-GglGs~va~~La~~Gv-g~i~lvD~D~ 55 (228)
T cd00757 19 LKNARVLVVGA-GGLGSPAAEYLAAAGV-GKLGLVDDDV 55 (228)
T ss_pred HhCCcEEEECC-CHHHHHHHHHHHHcCC-CEEEEEcCCE
Confidence 44568999998 9999999999999997 6999999874
No 493
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.13 E-value=0.33 Score=42.80 Aligned_cols=157 Identities=13% Similarity=0.092 Sum_probs=80.0
Q ss_pred CeEEEEcCC--CchHHHHHHHHHhCCCccEEEEEeCCCC-hhHHHHhhccccCccee----eeeccCCH-------HHHh
Q 024248 47 FKVAVLGAA--GGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTNAVVR----GFLGQQQL-------EDAL 112 (270)
Q Consensus 47 mKI~IIGa~--G~VGs~la~~l~~~g~~~eV~LvD~~~~-~~~~~dl~~~~~~~~~~----~i~~t~d~-------~~al 112 (270)
+.++|+||+ +-+|..++..|++.|. +|++.+++.. .....++.+......+. .+....+. .+.+
T Consensus 8 k~~lItGa~~s~GIG~aia~~la~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (257)
T PRK08594 8 KTYVVMGVANKRSIAWGIARSLHNAGA--KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV 85 (257)
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHCCC--EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence 468999985 6899999999999998 8999887531 11111221110000110 01111111 1223
Q ss_pred CCCCEEEEcCCCCCC---C----CCchh---hhHHhhHHHHHHHHHHHhHhC-CCCEEEEecCCCCCcHHHHHHHHHHhC
Q 024248 113 TGMDIVIIPAGVPRK---P----GMTRD---DLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVG 181 (270)
Q Consensus 113 ~~ADvVIi~ag~~~~---~----g~~r~---~~~~~N~~i~~~i~~~i~~~~-p~a~viv~sNPv~~~~~i~t~~~~~~s 181 (270)
...|++|.++|.... . ..+.. ..+..|+.....+++.+...- +.+.|+++|.-... .
T Consensus 86 g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~----~-------- 153 (257)
T PRK08594 86 GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGE----R-------- 153 (257)
T ss_pred CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCc----c--------
Confidence 457999999986421 0 11111 123445444333333333221 34677777643321 0
Q ss_pred CCCCCCeeeechhhHHHHHHHHHHHhCCCCCccceEEE
Q 024248 182 TYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVV 219 (270)
Q Consensus 182 g~p~~kviG~t~ldt~r~~~~lA~~l~v~~~~v~~~V~ 219 (270)
+.|..-.++.++..-..|-+.+|.++. +..|++..+
T Consensus 154 ~~~~~~~Y~asKaal~~l~~~la~el~--~~gIrvn~v 189 (257)
T PRK08594 154 VVQNYNVMGVAKASLEASVKYLANDLG--KDGIRVNAI 189 (257)
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHHhh--hcCCEEeee
Confidence 122223456665555567777888774 334544333
No 494
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.12 E-value=0.019 Score=52.16 Aligned_cols=57 Identities=23% Similarity=0.408 Sum_probs=47.1
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
.+..+|+|+|.|..||..++.+|..++. .|++++. .|.++++.++.||+||.++|
T Consensus 156 l~Gk~vvViGrS~iVG~Pla~lL~~~~a--tVt~chs-----------------------~t~~l~~~~~~ADIvI~AvG 210 (284)
T PRK14190 156 ISGKHVVVVGRSNIVGKPVGQLLLNENA--TVTYCHS-----------------------KTKNLAELTKQADILIVAVG 210 (284)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCC--EEEEEeC-----------------------CchhHHHHHHhCCEEEEecC
Confidence 3457999999999999999999998886 8877743 13467788999999999998
Q ss_pred CC
Q 024248 124 VP 125 (270)
Q Consensus 124 ~~ 125 (270)
.+
T Consensus 211 ~p 212 (284)
T PRK14190 211 KP 212 (284)
T ss_pred CC
Confidence 66
No 495
>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.
Probab=96.11 E-value=0.0089 Score=55.69 Aligned_cols=70 Identities=21% Similarity=0.441 Sum_probs=43.1
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCC-ccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCCC
Q 024248 48 KVAVLGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGV 124 (270)
Q Consensus 48 KI~IIGa~G~VGs~la~~l~~~g~-~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag~ 124 (270)
||+|+||+|++|..++..|..+++ ..+++++......++...+.. ..+. +. ..+. ++++++|+||+++|.
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~~~~----~~~~-~~-~~~~-~~~~~~D~v~~a~g~ 71 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVTFKG----KELE-VN-EAKI-ESFEGIDIALFSAGG 71 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeeeeCC----eeEE-EE-eCCh-HHhcCCCEEEECCCH
Confidence 689999999999999999988655 125666655443332222211 1111 11 1133 457899999998763
No 496
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.11 E-value=0.02 Score=51.96 Aligned_cols=57 Identities=26% Similarity=0.414 Sum_probs=47.1
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
....+|+|+|.+..||..++.+|..++. .|+.++. .|.|+++.++.||+||.++|
T Consensus 157 l~Gk~vvViGrS~iVGkPla~lL~~~~a--tVt~chs-----------------------~T~~l~~~~~~ADIvIsAvG 211 (284)
T PRK14177 157 VTGKNAVVVGRSPILGKPMAMLLTEMNA--TVTLCHS-----------------------KTQNLPSIVRQADIIVGAVG 211 (284)
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHCCC--EEEEeCC-----------------------CCCCHHHHHhhCCEEEEeCC
Confidence 3456999999999999999999998886 7877753 14567788999999999998
Q ss_pred CC
Q 024248 124 VP 125 (270)
Q Consensus 124 ~~ 125 (270)
.+
T Consensus 212 k~ 213 (284)
T PRK14177 212 KP 213 (284)
T ss_pred Cc
Confidence 66
No 497
>PRK08291 ectoine utilization protein EutC; Validated
Probab=96.09 E-value=0.029 Score=51.99 Aligned_cols=73 Identities=16% Similarity=0.287 Sum_probs=48.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHHh-CCCccEEEEEeCCCChhH--HHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcC
Q 024248 46 GFKVAVLGAAGGIGQPLAMLMKI-NPLVSVLHLYDVVNTPGV--TADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (270)
Q Consensus 46 ~mKI~IIGa~G~VGs~la~~l~~-~g~~~eV~LvD~~~~~~~--~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~a 122 (270)
.++|+|+|+ |..|...+..+.. .+ +.+|.+++++.++.+ ..++.+. . .+. +...+|+++++++||+||.+.
T Consensus 132 ~~~v~IiGa-G~~a~~~~~al~~~~~-~~~V~v~~R~~~~a~~l~~~~~~~-~--g~~-v~~~~d~~~al~~aDiVi~aT 205 (330)
T PRK08291 132 ASRAAVIGA-GEQARLQLEALTLVRP-IREVRVWARDAAKAEAYAADLRAE-L--GIP-VTVARDVHEAVAGADIIVTTT 205 (330)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEcCCHHHHHHHHHHHhhc-c--Cce-EEEeCCHHHHHccCCEEEEee
Confidence 468999997 9999987777764 44 469999999864322 2223221 0 111 223467889999999998876
Q ss_pred CC
Q 024248 123 GV 124 (270)
Q Consensus 123 g~ 124 (270)
..
T Consensus 206 ~s 207 (330)
T PRK08291 206 PS 207 (330)
T ss_pred CC
Confidence 43
No 498
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.09 E-value=0.021 Score=52.17 Aligned_cols=57 Identities=23% Similarity=0.410 Sum_probs=47.0
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
-...+|+|+|.+..||..++.+|..++. .|++++.. |.|+++.++.||+||.++|
T Consensus 158 l~Gk~vvViGrS~iVGkPla~lL~~~~a--TVt~chs~-----------------------T~~l~~~~~~ADIvVsAvG 212 (294)
T PRK14187 158 LSGSDAVVIGRSNIVGKPMACLLLGENC--TVTTVHSA-----------------------TRDLADYCSKADILVAAVG 212 (294)
T ss_pred CCCCEEEEECCCccchHHHHHHHhhCCC--EEEEeCCC-----------------------CCCHHHHHhhCCEEEEccC
Confidence 3456999999999999999999998886 78776532 3467778899999999998
Q ss_pred CC
Q 024248 124 VP 125 (270)
Q Consensus 124 ~~ 125 (270)
.+
T Consensus 213 kp 214 (294)
T PRK14187 213 IP 214 (294)
T ss_pred Cc
Confidence 76
No 499
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.09 E-value=0.022 Score=51.75 Aligned_cols=57 Identities=25% Similarity=0.412 Sum_probs=46.6
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
-+..+|+|+|.+..||..++.+|..++. .|+.+... |.|+.+-++.||+||.++|
T Consensus 156 l~Gk~vvViGrS~~VGkPla~lL~~~~A--TVt~chs~-----------------------T~dl~~~~k~ADIvIsAvG 210 (282)
T PRK14180 156 TEGAYAVVVGASNVVGKPVSQLLLNAKA--TVTTCHRF-----------------------TTDLKSHTTKADILIVAVG 210 (282)
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHCCC--EEEEEcCC-----------------------CCCHHHHhhhcCEEEEccC
Confidence 3467999999999999999999998886 77776431 3467777899999999998
Q ss_pred CC
Q 024248 124 VP 125 (270)
Q Consensus 124 ~~ 125 (270)
.+
T Consensus 211 kp 212 (282)
T PRK14180 211 KP 212 (282)
T ss_pred Cc
Confidence 76
No 500
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.07 E-value=0.022 Score=51.70 Aligned_cols=57 Identities=26% Similarity=0.475 Sum_probs=46.5
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEeCCCChhHHHHhhccccCcceeeeeccCCHHHHhCCCCEEEEcCC
Q 024248 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (270)
Q Consensus 44 ~~~mKI~IIGa~G~VGs~la~~l~~~g~~~eV~LvD~~~~~~~~~dl~~~~~~~~~~~i~~t~d~~~al~~ADvVIi~ag 123 (270)
.+..+|+|+|.|..||..++.+|..++. .|+.... .|.|+++.++.||+||.++|
T Consensus 154 l~Gk~vvViGrS~iVGkPla~lL~~~~a--tVtichs-----------------------~T~~l~~~~~~ADIvI~AvG 208 (282)
T PRK14169 154 VAGKRVVIVGRSNIVGRPLAGLMVNHDA--TVTIAHS-----------------------KTRNLKQLTKEADILVVAVG 208 (282)
T ss_pred CCCCEEEEECCCccchHHHHHHHHHCCC--EEEEECC-----------------------CCCCHHHHHhhCCEEEEccC
Confidence 3457999999999999999999998876 7776532 24567788999999999998
Q ss_pred CC
Q 024248 124 VP 125 (270)
Q Consensus 124 ~~ 125 (270)
.+
T Consensus 209 ~p 210 (282)
T PRK14169 209 VP 210 (282)
T ss_pred Cc
Confidence 76
Done!