RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= 024248
(270 letters)
>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 144
Score = 145 bits (367), Expect = 1e-44
Identities = 93/143 (65%), Positives = 116/143 (81%)
Query: 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQ 107
KVAVLGA+GGIGQPL++L+K +PLVS L LYD+ +TPGV AD+SH++T A V+G+LG +Q
Sbjct: 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQ 61
Query: 108 LEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVN 167
L D L G D+V+IPAGVPRKPGMTRDDLFN NA IV TL A+ CP A++ +ISNPVN
Sbjct: 62 LPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPVN 121
Query: 168 STVPIAAEVFKKVGTYDPKRLLG 190
ST+PI AEVFKK G Y+P ++ G
Sbjct: 122 STIPITAEVFKKHGVYNPNKIFG 144
>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli
[TaxId: 562]}
Length = 145
Score = 124 bits (313), Expect = 2e-36
Identities = 83/145 (57%), Positives = 101/145 (69%), Gaps = 3/145 (2%)
Query: 48 KVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGFLGQ 105
KVAVLGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH+ T ++GF G+
Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGE 61
Query: 106 QQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP 165
G D+V+I AGV RKPGM R DLFN+NAGIVK L + +AK CPKA + +I+NP
Sbjct: 62 DATPAL-EGADVVLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNP 120
Query: 166 VNSTVPIAAEVFKKVGTYDPKRLLG 190
VN+TV IAAEV KK G YD +L G
Sbjct: 121 VNTTVAIAAEVLKKAGVYDKNKLFG 145
>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum
vulgare), chloroplast [TaxId: 4558]}
Length = 175
Score = 116 bits (292), Expect = 5e-33
Identities = 28/137 (20%), Positives = 49/137 (35%), Gaps = 9/137 (6%)
Query: 48 KVAVLGAAGGIGQPLAMLMKINPL-----VSVLHLYDVVNTPGVTADISHMDTNA---VV 99
+AV GAAG I L + + L L + ++ ++ ++
Sbjct: 26 NIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLL 85
Query: 100 RGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPK-AI 158
R + +D ++ PR PGM R L +IN I + + K
Sbjct: 86 REVSIGIDPYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVK 145
Query: 159 VNLISNPVNSTVPIAAE 175
V ++ NP N+ I +
Sbjct: 146 VLVVGNPCNTNALICLK 162
>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium
longum, strain am101-2 [TaxId: 216816]}
Length = 143
Score = 108 bits (271), Expect = 3e-30
Identities = 41/145 (28%), Positives = 63/145 (43%), Gaps = 8/145 (5%)
Query: 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFLGQ 105
K+AV+GA G +G LA + + L D+ D+ H + G
Sbjct: 3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS 61
Query: 106 QQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP 165
E D+V+I AG +KPG +R +L I+K + + K P AI LI+NP
Sbjct: 62 DDPEIC-RDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNP 120
Query: 166 VNSTVPIAAEVFKKVGTYDPKRLLG 190
V+ IA V +K+ ++ G
Sbjct: 121 VD----IATHVAQKLTGLPENQIFG 141
>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus
thermophilus [TaxId: 274]}
Length = 154
Score = 108 bits (271), Expect = 3e-30
Identities = 34/149 (22%), Positives = 55/149 (36%), Gaps = 12/149 (8%)
Query: 48 KVAVLGAAGGIGQPLAMLMKINPLVS--------VLHLYDVVNTPGVTADISHMDTNAVV 99
+VAV GAAG IG L + ++ +L + + ++
Sbjct: 6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLL 65
Query: 100 RGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPK-AI 158
G + A D ++ PRK GM R DL +N I +A+ K
Sbjct: 66 AGLEATDDPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVK 125
Query: 159 VNLISNPVNSTVPIAAEVFKKVGTYDPKR 187
V ++ NP N+ IA +K +P+
Sbjct: 126 VLVVGNPANTNALIA---YKNAPGLNPRN 151
>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium
vibrioforme [TaxId: 1098]}
Length = 142
Score = 107 bits (268), Expect = 9e-30
Identities = 47/146 (32%), Positives = 68/146 (46%), Gaps = 7/146 (4%)
Query: 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFLGQ 105
K+ V+GA G +G A + L L L DVV G D+ + +
Sbjct: 2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTG 60
Query: 106 QQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP 165
DIVII AG+PRKPGMTR+DL NAGIVK + + I K I+ ++SNP
Sbjct: 61 SNDYADTANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNP 120
Query: 166 VNSTVPIAAEVFKKVGTYDPKRLLGV 191
++ +A +R++G+
Sbjct: 121 LDIMTHVA----WVRSGLPKERVIGM 142
>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon
Archaeoglobus fulgidus [TaxId: 2234]}
Length = 142
Score = 106 bits (266), Expect = 1e-29
Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 7/146 (4%)
Query: 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTNAVVRGFLGQ 105
K+ +GA G +G A +N V + L D+ G D++H +
Sbjct: 2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVG 60
Query: 106 QQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP 165
L G +I+++ AG+ RKPGMTR DL + NAGI+K + + I + P++ + +++NP
Sbjct: 61 GADYSLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNP 120
Query: 166 VNSTVPIAAEVFKKVGTYDPKRLLGV 191
++ I K + G+
Sbjct: 121 MDVMTYIM----WKESGKPRNEVFGM 142
>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga
maritima [TaxId: 2336]}
Length = 140
Score = 106 bits (265), Expect = 2e-29
Identities = 39/143 (27%), Positives = 65/143 (45%), Gaps = 5/143 (3%)
Query: 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQ 107
K+ ++G G +G A + + + L DV + + R
Sbjct: 2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAG 60
Query: 108 LEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVN 167
L G D+VI+ AGVP+KPG TR L NA ++K + ++K P +IV +++NPV+
Sbjct: 61 DYADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVD 120
Query: 168 STVPIAAEVFKKVGTYDPKRLLG 190
+ F K DP+++ G
Sbjct: 121 ----VLTYFFLKESGMDPRKVFG 139
>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium
thermocellum [TaxId: 1515]}
Length = 142
Score = 106 bits (265), Expect = 2e-29
Identities = 35/143 (24%), Positives = 60/143 (41%), Gaps = 5/143 (3%)
Query: 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQ 107
KVA++GA G +G A M + + L L DV + + +
Sbjct: 3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG 61
Query: 108 LEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVN 167
+ D++++ AG RKPG TR DL N I K + + I K ++ ++SNPV+
Sbjct: 62 DYSDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPVD 121
Query: 168 STVPIAAEVFKKVGTYDPKRLLG 190
+ +K +++G
Sbjct: 122 IITYMI----QKWSGLPVGKVIG 140
>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 154
Score = 106 bits (265), Expect = 3e-29
Identities = 33/153 (21%), Positives = 59/153 (38%), Gaps = 12/153 (7%)
Query: 48 KVAVLGAAGGIGQPLAML-----MKINPLVSVLHLYDVVNTPGVTADISHMDTNAVV--- 99
+V V GAAG I L + +L L D+ GV + + +
Sbjct: 5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLL 64
Query: 100 RGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIV 159
+ + + E A +D+ I+ +PR+ GM R DL N I K + K K++
Sbjct: 65 KDVIATDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVK 124
Query: 160 NL-ISNPVNSTVPIAAEVFKKVGTYDPKRLLGV 191
+ + NP N+ A++ + + +
Sbjct: 125 VIVVGNPANTNCLTASKSAPSI---PKENFSCL 154
>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon
Haloarcula marismortui [TaxId: 2238]}
Length = 142
Score = 105 bits (263), Expect = 5e-29
Identities = 40/147 (27%), Positives = 68/147 (46%), Gaps = 10/147 (6%)
Query: 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN----TPGVTADISHMDTNAVVRGFL 103
KV+V+GAAG +G + + + + D+ + T G AD +H A
Sbjct: 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNH--GIAYDSNTR 59
Query: 104 GQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163
+Q + G D+V+I AG+PR+PG TR DL NA I++ + + + I S
Sbjct: 60 VRQGGYEDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS 119
Query: 164 NPVNSTVPIAAEVFKKVGTYDPKRLLG 190
NPV+ + + G ++++G
Sbjct: 120 NPVD----LLNRHLYEAGDRSREQVIG 142
>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus
aurantiacus [TaxId: 1108]}
Length = 142
Score = 103 bits (259), Expect = 2e-28
Identities = 37/144 (25%), Positives = 69/144 (47%), Gaps = 6/144 (4%)
Query: 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTNAVVRGFLGQQ 106
K++++GA G +G A + L ++ L V P G D+ +
Sbjct: 3 KISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT 61
Query: 107 QLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPV 166
D++++ +G PRKPGM+R+DL +NA I + A P A++ +++NP+
Sbjct: 62 NNYADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPL 121
Query: 167 NSTVPIAAEVFKKVGTYDPKRLLG 190
++ +AAEV + +R++G
Sbjct: 122 DAMTYLAAEVSG----FPKERVIG 141
>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite
(Plasmodium falciparum) [TaxId: 5833]}
Length = 150
Score = 102 bits (254), Expect = 1e-27
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 11/154 (7%)
Query: 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTNAVVRGF 102
+P K+ ++G+ G IG +A L+ L V+ V N P G D SH + A
Sbjct: 1 APKAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCK 59
Query: 103 LGQQQLEDALTGMDIVIIPAGVPRKPGMT-----RDDLFNINAGIVKTLCEGIAKCCPKA 157
+ D L G D+VI+ AG + PG + RDDL +N I+ + I K CP A
Sbjct: 60 VSGSNTYDDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNA 119
Query: 158 IVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV 191
+ +++NPV+ V + + +++G+
Sbjct: 120 FIIVVTNPVDVMVQLL----HQHSGVPKNKIIGL 149
>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus
pentosus [TaxId: 1589]}
Length = 146
Score = 98.2 bits (244), Expect = 3e-26
Identities = 35/143 (24%), Positives = 57/143 (39%), Gaps = 5/143 (3%)
Query: 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQ 107
KV ++G G +G A M + + DVV + D A
Sbjct: 7 KVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSG 65
Query: 108 LEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVN 167
D+V+I AG P+KPG +R DL N N I+ ++ + + I + +NPV+
Sbjct: 66 EYSDCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPVD 125
Query: 168 STVPIAAEVFKKVGTYDPKRLLG 190
I K + +R++G
Sbjct: 126 ----ILTYATWKFSGFPKERVIG 144
>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 148
Score = 96.3 bits (239), Expect = 2e-25
Identities = 35/147 (23%), Positives = 62/147 (42%), Gaps = 8/147 (5%)
Query: 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTA--DISHMDTNAVVRGFL 103
G +V V+GA G +G + + + L D + + D +H A +
Sbjct: 6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDI 64
Query: 104 GQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163
+D D+V+I AG +KPG TR DL + N I +++ E + + + + +
Sbjct: 65 WHGDYDD-CRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT 123
Query: 164 NPVNSTVPIAAEVFKKVGTYDPKRLLG 190
NPV+ I K +R++G
Sbjct: 124 NPVD----ILTYATWKFSGLPHERVIG 146
>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 159
Score = 96.2 bits (239), Expect = 2e-25
Identities = 34/145 (23%), Positives = 58/145 (40%), Gaps = 8/145 (5%)
Query: 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTNAVVRGFLGQ 105
K+ V+G G +G A+ + + L L L D G D+ H +
Sbjct: 21 KITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFG 79
Query: 106 QQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP 165
+ +VII AG G TR DL N I+K + G+ + P + +++NP
Sbjct: 80 KDYNV-SANSKLVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVVTNP 138
Query: 166 VNSTVPIAAEVFKKVGTYDPKRLLG 190
V+ + K+ + R++G
Sbjct: 139 VDILTYVVW----KISGFPVGRVIG 159
>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo
sapiens), heart isoform (H chain) [TaxId: 9606]}
Length = 160
Score = 96.3 bits (239), Expect = 3e-25
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 8/148 (5%)
Query: 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGF 102
P K+ V+G G +G A+ + L L L DV+ G D+ H
Sbjct: 19 PNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKI 77
Query: 103 LGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 162
+ + IV++ AGV ++ G +R +L N + K + I K P I+ ++
Sbjct: 78 VADKDYSVT-ANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVV 136
Query: 163 SNPVNSTVPIAAEVFKKVGTYDPKRLLG 190
SNPV+ + K+ R++G
Sbjct: 137 SNPVDILTYVT----WKLSGLPKHRVIG 160
>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii
[TaxId: 5811]}
Length = 154
Score = 94.8 bits (235), Expect = 9e-25
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 12/150 (8%)
Query: 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTA-DISHMDTNAVVRGFLGQQ 106
KVA++G+ G IG + L + L V+ V P A D+SH+ + + +
Sbjct: 9 KVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE 67
Query: 107 -QLEDALTGMDIVIIPAGVPRKPG-----MTRDDLFNINAGIVKTLCEGIAKCCPKAIVN 160
E ALTG D VI+ AG+ + PG +R+DL N+ I++ + + I K CPK +
Sbjct: 68 YSYEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFII 127
Query: 161 LISNPVNSTVPIAAEVFKKVGTYDPKRLLG 190
+++NP++ V + E + G
Sbjct: 128 VVTNPLDCMVKVMCEASG----VPTNMICG 153
>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase,
L-HICDH {Lactobacillus confusus [TaxId: 1583]}
Length = 146
Score = 90.2 bits (223), Expect = 3e-23
Identities = 25/149 (16%), Positives = 53/149 (35%), Gaps = 12/149 (8%)
Query: 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTNAVVRGFLGQ 105
K+ ++G G +G +A + + D D N G +
Sbjct: 3 KIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVI 61
Query: 106 QQLEDALTGMDIVIIPAGVPR----KPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNL 161
L D+VI G + P R + +V+++ + + ++ +
Sbjct: 62 NDWAA-LADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVV 120
Query: 162 ISNPVNSTVPIAAEVFKKVGTYDPKRLLG 190
ISNPV+ + +F+ V + +++G
Sbjct: 121 ISNPVD----VITALFQHVTGFPAHKVIG 145
>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase
{Archaeon Methanococcus jannaschii [TaxId: 2190]}
Length = 145
Score = 90.2 bits (223), Expect = 4e-23
Identities = 39/149 (26%), Positives = 63/149 (42%), Gaps = 11/149 (7%)
Query: 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDV-VNTPGVTADISHMDTNAVVRGFL--- 103
KV ++GA+G +G A+L+ P + L L + + +
Sbjct: 2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANI 61
Query: 104 --GQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNL 161
+ + D+VII +GVPRK GM+R DL NA IV + IA+ C I +
Sbjct: 62 YVESDENLRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEICDTKIF-V 120
Query: 162 ISNPVNSTVPIAAEVFKKVGTYDPKRLLG 190
I+NPV+ A ++ ++ G
Sbjct: 121 ITNPVDVMTYKAL----VDSKFERNQVFG 145
>d1mlda2 d.162.1.1 (A:145-313) Malate dehydrogenase {Pig (Sus
scrofa) [TaxId: 9823]}
Length = 169
Score = 81.7 bits (201), Expect = 1e-19
Identities = 44/78 (56%), Positives = 52/78 (66%)
Query: 191 VTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTD 250
VT LD+VRAN FVAE+ GLDP V VPV+GGHAG TI+PL+SQ P ++ LT
Sbjct: 1 VTTLDIVRANAFVAELKGLDPARVSVPVIGGHAGKTIIPLISQCTPKVDFPQDQLSTLTG 60
Query: 251 RIQNGGTEVVEVIRGNWS 268
RIQ GTEVV+ G S
Sbjct: 61 RIQEAGTEVVKAKAGAGS 78
>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga
maritima [TaxId: 2336]}
Length = 162
Score = 77.8 bits (191), Expect = 3e-18
Identities = 21/167 (12%), Positives = 47/167 (28%), Gaps = 32/167 (19%)
Query: 48 KVAVLGAAGGIGQPLAMLMKI----NPLVSVLHLYDVVNTP-GVTADISHMDTNAVVRGF 102
++AV+G G P + + + + + YD+ + D +
Sbjct: 2 RIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVL 60
Query: 103 LGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIA----------- 151
+ E A+ VI G D+ + G++ G+
Sbjct: 61 ISDT-FEGAVVDAKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPI 119
Query: 152 --------KCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLG 190
+ A + +NP E + + ++ +G
Sbjct: 120 VEEYVDTVRKTSNATIVNFTNPSG----HITEFVRNY--LEYEKFIG 160
>d2cmda2 d.162.1.1 (A:146-312) Malate dehydrogenase {Escherichia
coli [TaxId: 562]}
Length = 167
Score = 75.9 bits (186), Expect = 1e-17
Identities = 47/75 (62%), Positives = 55/75 (73%), Gaps = 1/75 (1%)
Query: 191 VTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTD 250
VT LD++R+NTFVAE+ G P EV+VPV+GGH+GVTILPLLSQV T E+ LT
Sbjct: 1 VTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGVTILPLLSQVPGVS-FTEQEVADLTK 59
Query: 251 RIQNGGTEVVEVIRG 265
RIQN GTEVVE G
Sbjct: 60 RIQNAGTEVVEAKAG 74
>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 169
Score = 72.0 bits (176), Expect = 4e-16
Identities = 27/172 (15%), Positives = 47/172 (27%), Gaps = 36/172 (20%)
Query: 48 KVAVLGAAGGIGQPLAMLMKINPL----VSVLHLYDVVNTP--GVTADISH---MDTNAV 98
K+A +G G P + I V L L D+ ++ V
Sbjct: 3 KIATIGG-GSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGV 61
Query: 99 VRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGI-------- 150
AL G D V V +D+ + G++ G
Sbjct: 62 PIEIHLTLDRRRALDGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLR 121
Query: 151 ------------AKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLG 190
+ CP A + +NP + E + ++++G
Sbjct: 122 TIPVILDIIRDMEELCPDAWLINFTNPAG----MVTEAVLRY--TKQEKVVG 167
>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA
{Bacillus subtilis [TaxId: 1423]}
Length = 167
Score = 70.8 bits (173), Expect = 8e-16
Identities = 29/161 (18%), Positives = 45/161 (27%), Gaps = 30/161 (18%)
Query: 47 FKVAVLGAAGGIGQP---LAMLMKINPL-VSVLHLYDV----VNTPGVTADISHMDTNAV 98
F + + G G P L +L + + L LYD + D+ A
Sbjct: 4 FSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFI-REKAP 61
Query: 99 VRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIA------- 151
F E+A T +D V+ V + D+ + G+V G
Sbjct: 62 DIEFAATTDPEEAFTDVDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMR 121
Query: 152 -------------KCCPKAIVNLISNPVNSTVPIAAEVFKK 179
K P A + SNP +
Sbjct: 122 SIGGVLEILDYMEKYSPDAWMLNYSNPAAIVAEATRRLRPN 162
>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga
maritima [TaxId: 2336]}
Length = 171
Score = 68.3 bits (166), Expect = 8e-15
Identities = 27/167 (16%), Positives = 43/167 (25%), Gaps = 34/167 (20%)
Query: 45 PGFKVAVLGAAGGIGQPLAM---LMKINPL-VSVLHLYDVV--NTPGVTADISHM-DTNA 97
P K+ ++GA G L + L K L S + L D+ + +
Sbjct: 1 PSVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVG 59
Query: 98 VVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNI------------------- 138
F L+D + D VI A V + +
Sbjct: 60 ADLKFEKTMNLDDVIIDADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDY 119
Query: 139 -------NAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFK 178
+ I K PKA +NP+ +
Sbjct: 120 YTFSNYNQLKYFVDIARKIEKLSPKAWYLQAANPIFEGTTLVTRTVP 166
>d1guza2 d.162.1.1 (A:143-305) Malate dehydrogenase {Chlorobium
vibrioforme [TaxId: 1098]}
Length = 163
Score = 65.1 bits (158), Expect = 9e-14
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 193 MLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQ----VKPSCSLTPTEIDYL 248
+LD R +F+A LG+ ++++ V+GGH + + + S L ID L
Sbjct: 3 VLDAARFRSFIAMELGVSMQDINACVLGGHGDAMVPVVKYTTVAGIPISDLLPAETIDKL 62
Query: 249 TDRIQNGGTEVVEVIRGNWS 268
+R +NGG E+VE ++ +
Sbjct: 63 VERTRNGGAEIVEHLKQGSA 82
>d1uxja2 d.162.1.1 (A:144-307) Malate dehydrogenase {Chloroflexus
aurantiacus [TaxId: 1108]}
Length = 164
Score = 62.4 bits (151), Expect = 1e-12
Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
Query: 193 MLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSL----TPTEIDYL 248
+LD R TF+A G+ ++V ++GGH + + P + +
Sbjct: 3 VLDAARYRTFIAMEAGVSVKDVQAMLMGGHGDEMVPLPRFSTISGIPVSEFIAPDRLAQI 62
Query: 249 TDRIQNGGTEVVEVIRGNW 267
+R + GG E+V +++
Sbjct: 63 VERTRKGGGEIVNLLKTGS 81
>d5mdha2 d.162.1.1 (A:155-333) Malate dehydrogenase {Pig (Sus
scrofa) [TaxId: 9823]}
Length = 179
Score = 59.4 bits (143), Expect = 2e-11
Identities = 14/74 (18%), Positives = 26/74 (35%)
Query: 192 TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDR 251
T LD RA +A LG+ +V ++ G+ T P ++ K +
Sbjct: 1 TRLDHNRAKAQIALKLGVTSDDVKNVIIWGNHSSTQYPDVNHAKVKLQAKEVGVYEAVKD 60
Query: 252 IQNGGTEVVEVIRG 265
E + ++
Sbjct: 61 DSWLKGEFITTVQQ 74
>d2ldxa2 d.162.1.1 (A:160-331) Lactate dehydrogenase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 172
Score = 57.9 bits (139), Expect = 4e-11
Identities = 14/76 (18%), Positives = 25/76 (32%)
Query: 192 TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDR 251
LD R + E LG++P V+G H ++ +L TD+
Sbjct: 3 CNLDSARFRYLIGEKLGVNPTSCHGWVLGEHGDSSVPIWSGVNVAGVTLKSLNPAIGTDK 62
Query: 252 IQNGGTEVVEVIRGNW 267
+ V + +
Sbjct: 63 NKQHWKNVHKQVVEGG 78
>d1y6ja2 d.162.1.1 (A:149-317) Lactate dehydrogenase {Clostridium
thermocellum [TaxId: 1515]}
Length = 169
Score = 56.8 bits (136), Expect = 1e-10
Identities = 13/74 (17%), Positives = 30/74 (40%)
Query: 192 TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDR 251
T+LD +R ++E LG+D + V ++G H + ++ D +
Sbjct: 1 TVLDSIRFRYLLSEKLGVDVKNVHGYIIGEHGDSQLPLWSCTHIAGKNINEYIDDPKCNF 60
Query: 252 IQNGGTEVVEVIRG 265
+ ++ E ++
Sbjct: 61 TEEDKKKIAEDVKT 74
>d1llca2 d.162.1.1 (A:165-334) Lactate dehydrogenase {Lactobacillus
casei [TaxId: 1582]}
Length = 172
Score = 56.4 bits (135), Expect = 2e-10
Identities = 17/79 (21%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Query: 192 TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDR 251
T LD R +AE++ +D R V ++G H G T P+ S + +
Sbjct: 1 TSLDTARFRQSIAEMVNVDARSVHAYIMGEH-GDTEFPVWSHANIGGVTIAEWVKAHPEI 59
Query: 252 IQNGGTEVVEVIRGNWSDL 270
++ ++ E +R ++
Sbjct: 60 KEDKLVKMFEDVRDAAYEI 78
>d1llda2 d.162.1.1 (A:150-319) Lactate dehydrogenase
{Bifidobacterium longum, strain am101-2 [TaxId: 216816]}
Length = 170
Score = 56.0 bits (134), Expect = 2e-10
Identities = 10/50 (20%), Positives = 19/50 (38%)
Query: 192 TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLT 241
T LD R +A+ G++ + V + G H + S ++
Sbjct: 1 TNLDSARLRFLIAQQTGVNVKNVHAYIAGEHGDSEVPLWESATIGGVPMS 50
>d1ldna2 d.162.1.1 (A:163-330) Lactate dehydrogenase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 168
Score = 56.0 bits (134), Expect = 2e-10
Identities = 9/47 (19%), Positives = 16/47 (34%)
Query: 192 TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSC 238
T+LD R + E + P+ V ++G H +
Sbjct: 1 TILDTARFRFLLGEYFSVAPQNVHAYIIGEHGDTELPVWSQAYIGVM 47
>d1ldma2 d.162.1.1 (A:161-329) Lactate dehydrogenase {Dogfish
(Squalus acanthias) [TaxId: 7797]}
Length = 169
Score = 56.0 bits (134), Expect = 2e-10
Identities = 12/51 (23%), Positives = 15/51 (29%)
Query: 192 TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTP 242
LD R + E LG+ V+G H S L P
Sbjct: 3 CNLDSARFRYLMGERLGVHSCSCHGWVIGEHGDSVPSVWSGMNVASIKLHP 53
>d1a5za2 d.162.1.1 (A:164-333) Lactate dehydrogenase {Thermotoga
maritima [TaxId: 2336]}
Length = 172
Score = 55.6 bits (133), Expect = 3e-10
Identities = 16/76 (21%), Positives = 25/76 (32%)
Query: 192 TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDR 251
T+LD R T +A+ G PR V V V+G H + + L
Sbjct: 2 TVLDTARLRTLIAQHCGFSPRSVHVYVIGEHGDSEVPVWSGAMIGGIPLQNMCQVCQKCD 61
Query: 252 IQNGGTEVVEVIRGNW 267
+ + R +
Sbjct: 62 SKILENFAEKTKRAAY 77
>d1i0za2 d.162.1.1 (A:161-332) Lactate dehydrogenase {Human (Homo
sapiens), heart isoform (H chain) [TaxId: 9606]}
Length = 172
Score = 55.2 bits (132), Expect = 5e-10
Identities = 16/76 (21%), Positives = 27/76 (35%)
Query: 192 TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDR 251
LD R +AE LG+ P ++G H ++ SL + TD
Sbjct: 3 CNLDSARFRYLMAEKLGIHPSSCHGWILGEHGDSSVAVWSGVNVAGVSLQELNPEMGTDN 62
Query: 252 IQNGGTEVVEVIRGNW 267
EV +++ +
Sbjct: 63 DSENWKEVHKMVVESA 78
>d1ez4a2 d.162.1.1 (A:163-334) Lactate dehydrogenase {Lactobacillus
pentosus [TaxId: 1589]}
Length = 171
Score = 54.8 bits (131), Expect = 6e-10
Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Query: 192 TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPS 237
T LD R + + +DPR VD ++G H G + S
Sbjct: 1 TSLDSSRLRVALGKQFNVDPRSVDAYIMGEH-GDSEFAAYSTATIG 45
>d1pzga2 d.162.1.1 (A:164-334) Lactate dehydrogenase {Toxoplasma
gondii [TaxId: 5811]}
Length = 174
Score = 54.9 bits (131), Expect = 6e-10
Identities = 16/75 (21%), Positives = 26/75 (34%)
Query: 193 MLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRI 252
MLD R +VA+ L + PR+V V+G H + + + D +
Sbjct: 3 MLDSGRFRRYVADALSVSPRDVQATVIGTHGDCMVPLVRYITVNGYPIQKFIKDGVVTEK 62
Query: 253 QNGGTEVVEVIRGNW 267
Q + G
Sbjct: 63 QLEEIAEHTKVSGGE 77
>d1hyha2 d.162.1.1 (A:167-329) L-2-hydroxyisocapronate
dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId:
1583]}
Length = 163
Score = 54.5 bits (130), Expect = 8e-10
Identities = 16/75 (21%), Positives = 27/75 (36%), Gaps = 6/75 (8%)
Query: 192 TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLT------PTEI 245
T+LD R V E LDPR V +G H + + + ++
Sbjct: 2 TLLDTARMQRAVGEAFDLDPRSVSGYNLGEHGNSQFVAWSTVRVMGQPIVTLADAGDIDL 61
Query: 246 DYLTDRIQNGGTEVV 260
+ + + GG V+
Sbjct: 62 AAIEEEARKGGFTVL 76
>d1o6za2 d.162.1.1 (A:163-330) Malate dehydrogenase {Archaeon
Haloarcula marismortui [TaxId: 2238]}
Length = 161
Score = 53.7 bits (128), Expect = 1e-09
Identities = 14/73 (19%), Positives = 28/73 (38%), Gaps = 1/73 (1%)
Query: 192 TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDR 251
LD R ++E + V+ ++G H G +P+ S+V + D
Sbjct: 3 GRLDSARFRYVLSEEFDAPVQNVEGTILGEH-GDAQVPVFSKVSVDGTDPEFSGDEKEQL 61
Query: 252 IQNGGTEVVEVIR 264
+ + ++VI
Sbjct: 62 LGDLQESAMDVIE 74
>d1hyea2 d.162.1.1 (A:146-313) MJ0490, lactate/malate dehydrogenase
{Archaeon Methanococcus jannaschii [TaxId: 2190]}
Length = 168
Score = 53.3 bits (127), Expect = 2e-09
Identities = 17/70 (24%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Query: 192 TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDR 251
T LD +R +A+ G+ EV ++G H G +++PLLS +
Sbjct: 3 THLDSLRFKVAIAKFFGVHIDEVRTRIIGEH-GDSMVPLLSATSIGGIPIQKFERFKELP 61
Query: 252 IQNGGTEVVE 261
I +V
Sbjct: 62 IDEIIEDVKT 71
>d1t2da2 d.162.1.1 (A:151-315) Lactate dehydrogenase {Malaria
parasite (Plasmodium falciparum) [TaxId: 5833]}
Length = 165
Score = 51.4 bits (122), Expect = 8e-09
Identities = 11/45 (24%), Positives = 21/45 (46%)
Query: 193 MLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPS 237
+LD R ++++ L + PR+V+ +VG H +L
Sbjct: 2 VLDTSRLKYYISQKLNVCPRDVNAHIVGAHGNKMVLLKRYITVGG 46
>d1b8pa2 d.162.1.1 (A:159-329) Malate dehydrogenase {Aquaspirillum
arcticum [TaxId: 87645]}
Length = 171
Score = 48.3 bits (114), Expect = 1e-07
Identities = 9/46 (19%), Positives = 17/46 (36%)
Query: 194 LDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCS 239
LD RA + +A G ++ V G+ T+ + +
Sbjct: 3 LDHNRALSQIAAKTGKPVSSIEKLFVWGNHSPTMYADYRYAQIDGA 48
>d1y7ta2 d.162.1.1 (A:154-332) Malate dehydrogenase {Thermus
thermophilus [TaxId: 274]}
Length = 173
Score = 46.3 bits (109), Expect = 6e-07
Identities = 12/44 (27%), Positives = 18/44 (40%)
Query: 192 TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVK 235
T LD RA +A+ G + V G+ T+ P L +
Sbjct: 2 TRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSSTMFPDLFHAE 45
>d7mdha2 d.162.1.1 (A:198-385) Malate dehydrogenase {Sorghum
(Sorghum vulgare), chloroplast [TaxId: 4558]}
Length = 188
Score = 45.8 bits (108), Expect = 9e-07
Identities = 16/81 (19%), Positives = 27/81 (33%), Gaps = 7/81 (8%)
Query: 192 TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQV-------KPSCSLTPTE 244
T LD RA +A G+ +V + G+ T +P K T
Sbjct: 1 TRLDENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDFLNAKIDGRPVKEVIKRTKWL 60
Query: 245 IDYLTDRIQNGGTEVVEVIRG 265
+ T +Q G +++
Sbjct: 61 EEEFTITVQKRGGALIQKWGR 81
>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate
dehydrogenase/cyclohydrolase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 171
Score = 33.2 bits (75), Expect = 0.015
Identities = 17/113 (15%), Positives = 36/113 (31%), Gaps = 5/113 (4%)
Query: 46 GFKVAVLGAAGGIGQPLAMLM-KINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLG 104
G K V+ + +G+PLA L+ V + + + + + + G
Sbjct: 29 GKKCIVINRSEIVGRPLAALLANDGATVYSVDV-NNIQKFTRGESLKLNKHHVEDLGEYS 87
Query: 105 QQQLEDALTGMDIVIIPAGVPR---KPGMTRDDLFNINAGIVKTLCEGIAKCC 154
+ L+ D+VI ++ IN K + + +
Sbjct: 88 EDLLKKCSLDSDVVITGVPSENYKFPTEYIKEGAVCINFACTKNFSDDVKEKA 140
>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 312
Score = 33.1 bits (75), Expect = 0.028
Identities = 21/151 (13%), Positives = 45/151 (29%), Gaps = 12/151 (7%)
Query: 48 KVAVLGAAGGIGQPLA-MLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQ 106
++ + G AG +G L LM V+V+ + V I H + +
Sbjct: 3 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFE-----LINHD 57
Query: 107 QLEDALTGMDIVIIPAGVPRKPGMTRD--DLFNINAGIVKTLCEGIAKCCPKAIVNLISN 164
+E +D + A P + N + + + ++ ++
Sbjct: 58 VVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR-LLLASTS 116
Query: 165 PV---NSTVPIAAEVFKKVGTYDPKRLLGVT 192
V P + + + V P+
Sbjct: 117 EVYGDPEVHPQSEDYWGHVNPIGPRACYDEG 147
>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase
(acylating) {Pseudomonas sp. [TaxId: 306]}
Length = 157
Score = 32.4 bits (73), Expect = 0.030
Identities = 22/144 (15%), Positives = 48/144 (33%), Gaps = 18/144 (12%)
Query: 47 FKVAVLGAAGGIGQPLAM-LMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQ 105
KVA++G+ G IG L + +++ + + + + A M G G
Sbjct: 5 LKVAIIGS-GNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYAGVEGL 63
Query: 106 QQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAI------- 158
+L + +D V + + L ++ + A P +
Sbjct: 64 IKLPE-FADIDFVFDA--TSASAHVQNEALLRQAKPGIRLIDLTPAAIGPYCVPVVNLEE 120
Query: 159 ------VNLISNPVNSTVPIAAEV 176
VN+++ N + +A +
Sbjct: 121 HLGKLNVNMVTYAGNLDIMTSAAL 144
>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 205
Score = 32.3 bits (72), Expect = 0.041
Identities = 21/108 (19%), Positives = 33/108 (30%), Gaps = 6/108 (5%)
Query: 48 KVAVLGAAGGIGQPLA-MLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQ 106
K+A+ GA G G ++ V+VL V + VV L
Sbjct: 5 KIAIFGATGQTGLTTLAQAVQAGYEVTVL-----VRDSSRLPSEGPRPAHVVVGDVLQAA 59
Query: 107 QLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC 154
++ + G D VI+ G T + G+ K
Sbjct: 60 DVDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVV 107
>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose
epimerase/reductase (GDP-fucose synthetase) {Escherichia
coli [TaxId: 562]}
Length = 315
Score = 31.4 bits (70), Expect = 0.10
Identities = 24/152 (15%), Positives = 46/152 (30%), Gaps = 24/152 (15%)
Query: 48 KVAVLGAAGGIGQPLA-MLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQ 106
+V + G G +G + L + + VL D +++ +D+ AV F
Sbjct: 4 RVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------ELNLLDSRAVHDFF---- 50
Query: 107 QLEDALTGMDIVII---PAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163
A +D V + G D N I + + ++ L S
Sbjct: 51 ----ASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGS 106
Query: 164 N---PVNSTVPIAAEVFKKVGTYDPKRLLGVT 192
+ P + P+A + +
Sbjct: 107 SCIYPKLAKQPMAESELLQGTLEPTNEPYAIA 138
>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin
dehydrogenase {Methylobacterium extorquens [TaxId: 408]}
Length = 191
Score = 29.9 bits (66), Expect = 0.23
Identities = 20/145 (13%), Positives = 35/145 (24%), Gaps = 11/145 (7%)
Query: 30 SSGLGRMDCRAKGGSPGFKVA-VLGAAGGIGQPLA-MLMKINPLVSVLHLYDVVNTPGVT 87
++ + +A GGS K A VL G +G A +L V +
Sbjct: 6 AAAGVALVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAAD 65
Query: 88 ADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDL---FNIN----- 139
+ N +A+ G V + + + + +I
Sbjct: 66 SVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAGAIGLEL-LPQAAWQNESSIEIVADY 124
Query: 140 AGIVKTLCEGIAKCCPKAIVNLISN 164
GI
Sbjct: 125 NAQPPLGIGGIDATDKGKEYGGKRA 149
>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi
[TaxId: 90370]}
Length = 338
Score = 29.3 bits (64), Expect = 0.42
Identities = 22/128 (17%), Positives = 40/128 (31%), Gaps = 12/128 (9%)
Query: 48 KVAVLGAAGGIGQPLA-MLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLG-- 104
K+ + G G +G LA + + V D ++ G T ++ + + G
Sbjct: 2 KLLITGGCGFLGSNLASFALSQGIDLIVF---DNLSRKGATDNLHWLSSLGNFEFVHGDI 58
Query: 105 --QQQLEDALTGM--DIVIIPAGVPRKPGMTRD--DLFNINAGIVKTLCEGIAKCCPKAI 158
+ + +T D AG + F IN G L E + +
Sbjct: 59 RNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCN 118
Query: 159 VNLISNPV 166
+ S
Sbjct: 119 IIYSSTNK 126
>d1riqa2 d.104.1.1 (A:1-236) Alanyl-tRNA synthetase (AlaRS) {Aquifex
aeolicus [TaxId: 63363]}
Length = 236
Score = 29.2 bits (65), Expect = 0.42
Identities = 26/115 (22%), Positives = 41/115 (35%), Gaps = 20/115 (17%)
Query: 124 VPRKPGMTRDD--LFNINAGIV--KTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKK 179
V P + +D L +NAG+V K + G+ K K + + + ++
Sbjct: 23 VKSAPLVPENDPTLLFVNAGMVPFKNVFLGLEKRPYKRATS-CQKCLRVSGK--HNDLEQ 79
Query: 180 VGTYDPKRLLGVTMLD------------VVRANTFVAEVLGLDPREVDVPVVGGH 222
VG Y + ML + A FV EVL L ++ V V
Sbjct: 80 VG-YTSRHHTFFEMLGNFSFGDYFKKEAIEYAWEFVTEVLKLPKEKLYVSVYKDD 133
>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB)
{Streptococcus suis, serotype 2 [TaxId: 1307]}
Length = 361
Score = 29.3 bits (65), Expect = 0.43
Identities = 18/128 (14%), Positives = 33/128 (25%), Gaps = 11/128 (8%)
Query: 48 KVAVLGAAGGIGQPLA-MLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLG-- 104
K+ + G AG IG + ++K + D + G +S + +
Sbjct: 2 KILITGGAGFIGSAVVRHIIKNTQ--DTVVNIDKLTYAGNLESLSDISESNRYNFEHADI 59
Query: 105 --QQQLEDALTGM--DIVIIPAGVPRKPGMTRD--DLFNINAGIVKTLCEGIAKCCPKAI 158
++ D V+ A N L E K
Sbjct: 60 CDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALG 119
Query: 159 VNLISNPV 166
+ +N
Sbjct: 120 EDKKNNFR 127
>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde
dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}
Length = 154
Score = 28.7 bits (63), Expect = 0.48
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 46 GFKVAVLGAAGGIGQ 60
G+ VAV+GA G +G
Sbjct: 1 GYTVAVVGATGAVGA 15
>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO)
{Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 212
Score = 28.9 bits (63), Expect = 0.56
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 48 KVAVLGAAGGIGQPLAMLM 66
+VA+LG G +G+ LA+ +
Sbjct: 2 RVALLGGTGNLGKGLALRL 20
>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB)
{Streptomyces venezuelae [TaxId: 54571]}
Length = 322
Score = 29.0 bits (64), Expect = 0.65
Identities = 24/129 (18%), Positives = 45/129 (34%), Gaps = 10/129 (7%)
Query: 48 KVAVLGAAGGIGQPLA-MLMKINPLVSV---LHLYDVVNTPGVTADISHMDTNAVVRGFL 103
++ V G AG IG L+ + + D + G A+++ +D + +R
Sbjct: 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVH 61
Query: 104 G----QQQLEDALTGMDIVIIPAGVPRKPGMTRD--DLFNINAGIVKTLCEGIAKCCPKA 157
G L L G+D ++ A N +TL +
Sbjct: 62 GDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGR 121
Query: 158 IVNLISNPV 166
+V++ +N V
Sbjct: 122 VVHVSTNQV 130
>d1ewka_ c.93.1.1 (A:) Metabotropic glutamate receptor subtype 1
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 477
Score = 28.4 bits (62), Expect = 1.2
Identities = 8/31 (25%), Positives = 11/31 (35%), Gaps = 6/31 (19%)
Query: 158 IVNLISNPVNSTVPIAAEVFKKVGTYDPKRL 188
I+NL N + VGT+ L
Sbjct: 446 IMNLQYTEANR------YDYVHVGTWHEGVL 470
>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde
dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}
Length = 183
Score = 27.6 bits (60), Expect = 1.4
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLY 78
++AVLGA+G G + L+ +P + +
Sbjct: 7 RIAVLGASGYTGAEIVRLLANHPQFRIKVMT 37
>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase
{Comamonas testosteroni [TaxId: 285]}
Length = 257
Score = 27.6 bits (60), Expect = 1.4
Identities = 20/114 (17%), Positives = 37/114 (32%), Gaps = 17/114 (14%)
Query: 48 KVAVL-GAAGGIGQPLAMLMKINPLVSVLHLYDVV----NTPGVTADISHMDTNAVVRGF 102
+ V+ G A GIG ++ + +V V AD+S +
Sbjct: 2 SIIVISGCATGIGAATRKVL-------EAAGHQIVGIDIRDAEVIADLS--TAEGRKQAI 52
Query: 103 LGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPK 156
L GMD +++ AG+ ++ ++N L + K
Sbjct: 53 --ADVLAKCSKGMDGLVLCAGLGP-QTKVLGNVVSVNYFGATELMDAFLPALKK 103
>d1vkna1 c.2.1.3 (A:1-144,A:308-339)
N-acetyl-gamma-glutamyl-phosphate reductase ArgC
{Thermotoga maritima [TaxId: 2336]}
Length = 176
Score = 27.1 bits (59), Expect = 1.7
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLY 78
+ ++GA G G L L+K +P + +L
Sbjct: 3 RAGIIGATGYTGLELVRLLKNHPEAKITYLS 33
>d1vjta1 c.2.1.5 (A:-1-191) Putative alpha-glucosidase TM0752
{Thermotoga maritima [TaxId: 2336]}
Length = 193
Score = 27.1 bits (59), Expect = 1.9
Identities = 23/164 (14%), Positives = 44/164 (26%), Gaps = 44/164 (26%)
Query: 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSV------LHLYDV------------------- 80
K++++GA G + L ++ I + +++ DV
Sbjct: 2 HMKISIIGA-GSVRFALQLVGDIAQTEELSREDTHIYMMDVHERRLNASYILARKYVEEL 60
Query: 81 ---VNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFN 137
V ++ +D + +G V K G R
Sbjct: 61 NSPVKIVKTSSLDEAIDGADFIINTAYPYDPRYHDSGSQRWDEVTKVGEKHGYYRGIDSQ 120
Query: 138 INAGI---------------VKTLCEGIAKCCPKAIVNLISNPV 166
+ + E + K PKA + +NPV
Sbjct: 121 ELNMVSTYTYVLSSYPDMKLALEIAEKMKKMAPKAYLMQTANPV 164
>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant
arborvitae (Thuja plicata) [TaxId: 3316]}
Length = 312
Score = 27.0 bits (58), Expect = 2.5
Identities = 5/16 (31%), Positives = 10/16 (62%)
Query: 48 KVAVLGAAGGIGQPLA 63
+V ++G G IG+ +
Sbjct: 5 RVLIVGGTGYIGKRIV 20
>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase
{Loblolly pine (Pinus taeda) [TaxId: 3352]}
Length = 307
Score = 26.7 bits (57), Expect = 3.0
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 48 KVAVLGAAGGIGQPLA 63
++ ++GA G IG+ +A
Sbjct: 5 RILLIGATGYIGRHVA 20
>d2g17a1 c.2.1.3 (A:1-153,A:309-334)
N-acetyl-gamma-glutamyl-phosphate reductase ArgC
{Salmonella typhimurium [TaxId: 90371]}
Length = 179
Score = 26.2 bits (56), Expect = 3.3
Identities = 7/31 (22%), Positives = 15/31 (48%)
Query: 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLY 78
++GA+G G L + +P +++ L
Sbjct: 3 NTLIVGASGYAGAELVSYVNRHPHMTITALT 33
>d1irud_ d.153.1.4 (D:) Proteasome alpha subunit (non-catalytic)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 243
Score = 26.1 bits (57), Expect = 3.8
Identities = 15/81 (18%), Positives = 31/81 (38%), Gaps = 15/81 (18%)
Query: 173 AAEVFKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLS 232
E +K T + +T+ V++A + EV+ + +++ V+ + I
Sbjct: 167 VREFLEKNYTDEAIETDDLTIKLVIKA---LLEVVQSGGKNIELAVMRRDQSLKI----- 218
Query: 233 QVKPSCSLTPTEIDYLTDRIQ 253
L P EI+ I+
Sbjct: 219 -------LNPEEIEKYVAEIE 232
>d1s6ya2 d.162.1.2 (A:173-445) 6-phospho-beta-glucosidase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 270
Score = 26.4 bits (58), Expect = 4.0
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 203 VAEVLGLDPREVDVPVVG 220
VA++LG+D V + G
Sbjct: 10 VAKLLGVDADRVHIDFAG 27
>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 144
Score = 25.6 bits (55), Expect = 4.8
Identities = 20/124 (16%), Positives = 37/124 (29%), Gaps = 6/124 (4%)
Query: 48 KVAVLGAAGGIGQPL-AMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQ 106
VAV+GA G +G+ L +L + + + LHL + G +
Sbjct: 4 NVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAESSLRVGDVDSFDFS 63
Query: 107 QLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIV-----NL 161
+ A + A R + A + + + L
Sbjct: 64 SVGLAFFAAAAEVSRAHAERARAAGCSVIDLSGALEPSVAPPVMVSVNAERLASQAAPFL 123
Query: 162 ISNP 165
+S+P
Sbjct: 124 LSSP 127
>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase
{Escherichia coli [TaxId: 562]}
Length = 162
Score = 25.6 bits (55), Expect = 4.9
Identities = 9/46 (19%), Positives = 19/46 (41%)
Query: 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM 93
+VA+ GA G +G+ L V + + + + +D +
Sbjct: 6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGEL 51
>d1o98a1 c.105.1.1 (A:77-310) 2,3-Bisphosphoglycerate-independent
phosphoglycerate mutase, substrate-binding domain
{Bacillus stearothermophilus [TaxId: 1422]}
Length = 234
Score = 25.8 bits (56), Expect = 5.0
Identities = 7/53 (13%), Positives = 18/53 (33%)
Query: 106 QQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAI 158
++L++ + + I R M RD ++ + + G +
Sbjct: 89 KELQEKIKEYGVGEIATLSGRYYSMDRDKRWDRVEKAYRAMVYGEGPTYRDPL 141
>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA
{Haemophilus influenzae [TaxId: 727]}
Length = 152
Score = 25.6 bits (55), Expect = 5.1
Identities = 6/51 (11%), Positives = 18/51 (35%)
Query: 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAV 98
K+ ++G G +G A ++ + + + + + +V
Sbjct: 11 KIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESILANADVVIVSV 61
>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240
(T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId:
3702]}
Length = 252
Score = 25.9 bits (55), Expect = 5.3
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 49 VAVLGAAGGIGQPLA-MLMKINPLVSVLHL 77
V V GA+G GQ + L + + L
Sbjct: 6 VLVTGASGRTGQIVYKKLKEGSDKFVAKGL 35
>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus
thermophilus [TaxId: 274]}
Length = 248
Score = 26.0 bits (57), Expect = 5.4
Identities = 22/132 (16%), Positives = 39/132 (29%), Gaps = 24/132 (18%)
Query: 48 KVA-VLGAAGGIGQPLAMLMK----------INPLVSVLHLYDVVNTPGVTADISHMDTN 96
K V G A GIG+ +A + P + + + D+ D
Sbjct: 6 KGVLVTGGARGIGRAIAQAFAREGALVALCDLRP--EGKEVAEAIGGAFFQVDLE--DER 61
Query: 97 AVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTR------DDLFNINAGIVKTLCEGI 150
VR ++ AL +D+++ A + + +N L
Sbjct: 62 ERVRFV---EEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALA 118
Query: 151 AKCCPKAIVNLI 162
A+ K I
Sbjct: 119 AREMRKVGGGAI 130
>d1obba2 d.162.1.2 (A:173-480) Alpha-glucosidase AglA {Thermotoga
maritima [TaxId: 2336]}
Length = 308
Score = 25.8 bits (56), Expect = 6.1
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 203 VAEVLGLDPREVDVPVVG 220
+ E LGL+ +VD V G
Sbjct: 11 IVEKLGLEEEKVDWQVAG 28
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.138 0.407
Gapped
Lambda K H
0.267 0.0548 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,022,943
Number of extensions: 48037
Number of successful extensions: 307
Number of sequences better than 10.0: 1
Number of HSP's gapped: 274
Number of HSP's successfully gapped: 90
Length of query: 270
Length of database: 2,407,596
Length adjustment: 84
Effective length of query: 186
Effective length of database: 1,254,276
Effective search space: 233295336
Effective search space used: 233295336
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.2 bits)