BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024249
(270 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q94BQ2|PRS8B_ARATH 26S protease regulatory subunit 8 homolog B OS=Arabidopsis thaliana
GN=RPT6B PE=2 SV=1
Length = 419
Score = 550 bits (1418), Expect = e-156, Method: Compositional matrix adjust.
Identities = 266/270 (98%), Positives = 269/270 (99%)
Query: 1 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 60
MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT
Sbjct: 150 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 209
Query: 61 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 120
LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA
Sbjct: 210 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 269
Query: 121 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 180
RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE
Sbjct: 270 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 329
Query: 181 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 240
FPNPNEESR DILKIHSR+MNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERR+
Sbjct: 330 FPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRV 389
Query: 241 HVTQEDFEMAVAKVMKKETEKNMSLRKLWK 270
HVTQEDFEMAVAKVMKK+TEKNMSLRKLWK
Sbjct: 390 HVTQEDFEMAVAKVMKKDTEKNMSLRKLWK 419
>sp|Q9C5U3|PRS8A_ARATH 26S protease regulatory subunit 8 homolog A OS=Arabidopsis thaliana
GN=RPT6A PE=2 SV=1
Length = 419
Score = 550 bits (1418), Expect = e-156, Method: Compositional matrix adjust.
Identities = 266/270 (98%), Positives = 269/270 (99%)
Query: 1 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 60
MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT
Sbjct: 150 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 209
Query: 61 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 120
LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA
Sbjct: 210 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 269
Query: 121 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 180
RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE
Sbjct: 270 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 329
Query: 181 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 240
FPNPNEESR DILKIHSR+MNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERR+
Sbjct: 330 FPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRV 389
Query: 241 HVTQEDFEMAVAKVMKKETEKNMSLRKLWK 270
HVTQEDFEMAVAKVMKK+TEKNMSLRKLWK
Sbjct: 390 HVTQEDFEMAVAKVMKKDTEKNMSLRKLWK 419
>sp|P62198|PRS8_RAT 26S protease regulatory subunit 8 OS=Rattus norvegicus GN=Psmc5
PE=1 SV=1
Length = 406
Score = 494 bits (1273), Expect = e-139, Method: Compositional matrix adjust.
Identities = 237/270 (87%), Positives = 259/270 (95%), Gaps = 1/270 (0%)
Query: 1 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 60
M VEKVPDSTY+MIGGLD+QIKEIKEVIELP+KHPELFE+LGIAQPKGVLLYGPPGTGKT
Sbjct: 138 MMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKT 197
Query: 61 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 120
LLARAVAHHTDCTFIRVSGSELVQK+IGEG+RMVRELFVMAREHAPSIIFMDEIDSIGS+
Sbjct: 198 LLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSS 257
Query: 121 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 180
R+E GSG GDSEVQRTMLELLNQLDGFEA+ IKV+MATNRIDILD ALLRPGRIDRKIE
Sbjct: 258 RLEGGSG-GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIE 316
Query: 181 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 240
FP PNEE+RLDILKIHSR+MNL RGI+L+KIAE M GASGAE+K VCTEAGM+ALRERR+
Sbjct: 317 FPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRV 376
Query: 241 HVTQEDFEMAVAKVMKKETEKNMSLRKLWK 270
HVTQEDFEMAVAKVM+K++EKNMS++KLWK
Sbjct: 377 HVTQEDFEMAVAKVMQKDSEKNMSIKKLWK 406
>sp|P62197|PRS8_PIG 26S protease regulatory subunit 8 OS=Sus scrofa GN=PSMC5 PE=2 SV=1
Length = 406
Score = 494 bits (1273), Expect = e-139, Method: Compositional matrix adjust.
Identities = 237/270 (87%), Positives = 259/270 (95%), Gaps = 1/270 (0%)
Query: 1 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 60
M VEKVPDSTY+MIGGLD+QIKEIKEVIELP+KHPELFE+LGIAQPKGVLLYGPPGTGKT
Sbjct: 138 MMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKT 197
Query: 61 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 120
LLARAVAHHTDCTFIRVSGSELVQK+IGEG+RMVRELFVMAREHAPSIIFMDEIDSIGS+
Sbjct: 198 LLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSS 257
Query: 121 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 180
R+E GSG GDSEVQRTMLELLNQLDGFEA+ IKV+MATNRIDILD ALLRPGRIDRKIE
Sbjct: 258 RLEGGSG-GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIE 316
Query: 181 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 240
FP PNEE+RLDILKIHSR+MNL RGI+L+KIAE M GASGAE+K VCTEAGM+ALRERR+
Sbjct: 317 FPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRV 376
Query: 241 HVTQEDFEMAVAKVMKKETEKNMSLRKLWK 270
HVTQEDFEMAVAKVM+K++EKNMS++KLWK
Sbjct: 377 HVTQEDFEMAVAKVMQKDSEKNMSIKKLWK 406
>sp|P62196|PRS8_MOUSE 26S protease regulatory subunit 8 OS=Mus musculus GN=Psmc5 PE=1
SV=1
Length = 406
Score = 494 bits (1273), Expect = e-139, Method: Compositional matrix adjust.
Identities = 237/270 (87%), Positives = 259/270 (95%), Gaps = 1/270 (0%)
Query: 1 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 60
M VEKVPDSTY+MIGGLD+QIKEIKEVIELP+KHPELFE+LGIAQPKGVLLYGPPGTGKT
Sbjct: 138 MMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKT 197
Query: 61 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 120
LLARAVAHHTDCTFIRVSGSELVQK+IGEG+RMVRELFVMAREHAPSIIFMDEIDSIGS+
Sbjct: 198 LLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSS 257
Query: 121 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 180
R+E GSG GDSEVQRTMLELLNQLDGFEA+ IKV+MATNRIDILD ALLRPGRIDRKIE
Sbjct: 258 RLEGGSG-GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIE 316
Query: 181 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 240
FP PNEE+RLDILKIHSR+MNL RGI+L+KIAE M GASGAE+K VCTEAGM+ALRERR+
Sbjct: 317 FPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRV 376
Query: 241 HVTQEDFEMAVAKVMKKETEKNMSLRKLWK 270
HVTQEDFEMAVAKVM+K++EKNMS++KLWK
Sbjct: 377 HVTQEDFEMAVAKVMQKDSEKNMSIKKLWK 406
>sp|P62195|PRS8_HUMAN 26S protease regulatory subunit 8 OS=Homo sapiens GN=PSMC5 PE=1
SV=1
Length = 406
Score = 494 bits (1273), Expect = e-139, Method: Compositional matrix adjust.
Identities = 237/270 (87%), Positives = 259/270 (95%), Gaps = 1/270 (0%)
Query: 1 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 60
M VEKVPDSTY+MIGGLD+QIKEIKEVIELP+KHPELFE+LGIAQPKGVLLYGPPGTGKT
Sbjct: 138 MMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKT 197
Query: 61 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 120
LLARAVAHHTDCTFIRVSGSELVQK+IGEG+RMVRELFVMAREHAPSIIFMDEIDSIGS+
Sbjct: 198 LLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSS 257
Query: 121 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 180
R+E GSG GDSEVQRTMLELLNQLDGFEA+ IKV+MATNRIDILD ALLRPGRIDRKIE
Sbjct: 258 RLEGGSG-GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIE 316
Query: 181 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 240
FP PNEE+RLDILKIHSR+MNL RGI+L+KIAE M GASGAE+K VCTEAGM+ALRERR+
Sbjct: 317 FPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRV 376
Query: 241 HVTQEDFEMAVAKVMKKETEKNMSLRKLWK 270
HVTQEDFEMAVAKVM+K++EKNMS++KLWK
Sbjct: 377 HVTQEDFEMAVAKVMQKDSEKNMSIKKLWK 406
>sp|P62194|PRS8_BOVIN 26S protease regulatory subunit 8 OS=Bos taurus GN=PSMC5 PE=2 SV=1
Length = 406
Score = 494 bits (1273), Expect = e-139, Method: Compositional matrix adjust.
Identities = 237/270 (87%), Positives = 259/270 (95%), Gaps = 1/270 (0%)
Query: 1 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 60
M VEKVPDSTY+MIGGLD+QIKEIKEVIELP+KHPELFE+LGIAQPKGVLLYGPPGTGKT
Sbjct: 138 MMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKT 197
Query: 61 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 120
LLARAVAHHTDCTFIRVSGSELVQK+IGEG+RMVRELFVMAREHAPSIIFMDEIDSIGS+
Sbjct: 198 LLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSS 257
Query: 121 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 180
R+E GSG GDSEVQRTMLELLNQLDGFEA+ IKV+MATNRIDILD ALLRPGRIDRKIE
Sbjct: 258 RLEGGSG-GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIE 316
Query: 181 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 240
FP PNEE+RLDILKIHSR+MNL RGI+L+KIAE M GASGAE+K VCTEAGM+ALRERR+
Sbjct: 317 FPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRV 376
Query: 241 HVTQEDFEMAVAKVMKKETEKNMSLRKLWK 270
HVTQEDFEMAVAKVM+K++EKNMS++KLWK
Sbjct: 377 HVTQEDFEMAVAKVMQKDSEKNMSIKKLWK 406
>sp|P54814|PRS8_MANSE 26S protease regulatory subunit 8 OS=Manduca sexta PE=2 SV=1
Length = 402
Score = 494 bits (1272), Expect = e-139, Method: Compositional matrix adjust.
Identities = 236/270 (87%), Positives = 260/270 (96%), Gaps = 1/270 (0%)
Query: 1 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 60
M VEKVPDSTY+M+GGLD+QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPPGTGKT
Sbjct: 134 MMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 193
Query: 61 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 120
LLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS+
Sbjct: 194 LLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSS 253
Query: 121 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 180
R+ESGSG GDSEVQRTMLELLNQLDGFEA+ IKV+MATNRIDILD ALLRPGRIDRKIE
Sbjct: 254 RIESGSG-GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIE 312
Query: 181 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 240
FP PNEE+RLDILKIHSR+MNL RGI+L+KIAE M GASGAE+K VCTEAGM+ALRERR+
Sbjct: 313 FPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRV 372
Query: 241 HVTQEDFEMAVAKVMKKETEKNMSLRKLWK 270
HVTQEDFEMAVAKVM+K++EKNMS++KLWK
Sbjct: 373 HVTQEDFEMAVAKVMQKDSEKNMSIKKLWK 402
>sp|O18413|PRS8_DROME 26S protease regulatory subunit 8 OS=Drosophila melanogaster
GN=Pros45 PE=1 SV=2
Length = 405
Score = 494 bits (1271), Expect = e-139, Method: Compositional matrix adjust.
Identities = 236/270 (87%), Positives = 260/270 (96%), Gaps = 1/270 (0%)
Query: 1 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 60
M VEKVPDSTY+M+GGLD+QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPPGTGKT
Sbjct: 137 MMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 196
Query: 61 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 120
LLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS+
Sbjct: 197 LLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSS 256
Query: 121 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 180
R+ESGSG GDSEVQRTMLELLNQLDGFEA+ IKV+MATNRIDILD ALLRPGRIDRKIE
Sbjct: 257 RIESGSG-GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIE 315
Query: 181 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 240
FP PNEE+RLDILKIHSR+MNL RGI+L+KIAE M GASGAE+K VCTEAGM+ALRERR+
Sbjct: 316 FPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRV 375
Query: 241 HVTQEDFEMAVAKVMKKETEKNMSLRKLWK 270
HVTQEDFEMAVAKVM+K++EKNMS++KLWK
Sbjct: 376 HVTQEDFEMAVAKVMQKDSEKNMSIKKLWK 405
>sp|Q25544|PRS8_NAEFO 26S protease regulatory subunit 8 homolog OS=Naegleria fowleri PE=2
SV=1
Length = 414
Score = 486 bits (1252), Expect = e-137, Method: Compositional matrix adjust.
Identities = 231/270 (85%), Positives = 251/270 (92%)
Query: 1 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 60
MKVEKVPD+TY+M+GGLD+QIKEIKEVIELPIKHPELFESLGIAQPKGV++YGPPGTGKT
Sbjct: 145 MKVEKVPDATYEMVGGLDEQIKEIKEVIELPIKHPELFESLGIAQPKGVIMYGPPGTGKT 204
Query: 61 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 120
LLARAVAHHTDCTFIRVSGSELVQKYIGEGS+MVRELFVMAREHAPSIIFMDEIDSIGS
Sbjct: 205 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSKMVRELFVMAREHAPSIIFMDEIDSIGST 264
Query: 121 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 180
R E G G GDSEVQRTMLELLNQLDGFE++ IK++MATNRIDILD ALLRPGRIDRKIE
Sbjct: 265 RTEGGKGGGDSEVQRTMLELLNQLDGFESTQNIKIIMATNRIDILDPALLRPGRIDRKIE 324
Query: 181 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 240
FPNPNE +RLDILKIHSRRMNL RGI+L+KIA + GASGAE+KA CTEAGMFALRERR+
Sbjct: 325 FPNPNELARLDILKIHSRRMNLTRGINLRKIASMLGGASGAEIKATCTEAGMFALRERRV 384
Query: 241 HVTQEDFEMAVAKVMKKETEKNMSLRKLWK 270
HVTQED EMAVAKVMK+ E NMS +KL+K
Sbjct: 385 HVTQEDLEMAVAKVMKRGDESNMSFKKLFK 414
>sp|P46470|PRS8_XENLA 26S protease regulatory subunit 8 OS=Xenopus laevis GN=psmc5 PE=2
SV=2
Length = 461
Score = 486 bits (1250), Expect = e-137, Method: Compositional matrix adjust.
Identities = 236/270 (87%), Positives = 257/270 (95%), Gaps = 2/270 (0%)
Query: 1 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 60
M VEKVPDSTY+MIGGLD+QIKEIKEVIELP+KHPE FE+LGIAQPKGVLLYGPPGTGKT
Sbjct: 133 MMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKT 192
Query: 61 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 120
LLARAVAHHTDCTFIRVSGSELVQK+IGEG+RMVRELFVMAREHAPSIIFMDEIDSIGS
Sbjct: 193 LLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGS- 251
Query: 121 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 180
R+E GSG GDSEVQRTMLELLNQLDGFEA+ IKV+MATNRIDILD ALLRPGRIDRKIE
Sbjct: 252 RLEGGSG-GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIE 310
Query: 181 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 240
FP PNEE+RLDILKIHSR+MNL RGI+L+KIAE M GASGAE+K VCTEAGM+ALRERR+
Sbjct: 311 FPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRV 370
Query: 241 HVTQEDFEMAVAKVMKKETEKNMSLRKLWK 270
HVTQEDFEMAVAKVM+K++EKNMS++KLWK
Sbjct: 371 HVTQEDFEMAVAKVMQKDSEKNMSIKKLWK 400
>sp|P34124|PRS8_DICDI 26S protease regulatory subunit 8 OS=Dictyostelium discoideum
GN=psmC5 PE=1 SV=2
Length = 403
Score = 475 bits (1222), Expect = e-133, Method: Compositional matrix adjust.
Identities = 239/270 (88%), Positives = 259/270 (95%)
Query: 1 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 60
MKVEK+PDSTYDM+GGLD+QIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT
Sbjct: 134 MKVEKIPDSTYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 193
Query: 61 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 120
LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELF+MAREHAPSIIFMDEIDSIGS+
Sbjct: 194 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGSS 253
Query: 121 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 180
R ESGSG GDSEVQRTMLELLNQLDGFE++ IKVLM TNRIDILD ALLRPGRIDRKIE
Sbjct: 254 RGESGSGGGDSEVQRTMLELLNQLDGFESTKNIKVLMCTNRIDILDPALLRPGRIDRKIE 313
Query: 181 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 240
FPNP + RLDILKIHSR+MNL RGI+LKKI++KMNGASGAELKAVCTEAGM+ALRERR+
Sbjct: 314 FPNPGDAGRLDILKIHSRKMNLTRGINLKKISDKMNGASGAELKAVCTEAGMYALRERRV 373
Query: 241 HVTQEDFEMAVAKVMKKETEKNMSLRKLWK 270
HV+QEDFEMAV+KVMKK++E+NMS+ KLWK
Sbjct: 374 HVSQEDFEMAVSKVMKKDSEQNMSINKLWK 403
>sp|Q01939|PRS8_YEAST 26S protease regulatory subunit 8 homolog OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RPT6 PE=1
SV=4
Length = 405
Score = 465 bits (1197), Expect = e-130, Method: Compositional matrix adjust.
Identities = 222/270 (82%), Positives = 246/270 (91%), Gaps = 1/270 (0%)
Query: 1 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 60
M VEKVPDSTYDM+GGL +QIKEIKEVIELP+KHPELFESLGIAQPKGV+LYGPPGTGKT
Sbjct: 137 MMVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKT 196
Query: 61 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 120
LLARAVAHHTDC FIRVSG+ELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS
Sbjct: 197 LLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGST 256
Query: 121 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 180
R+E GSG GDSEVQRTMLELLNQLDGFE S IK++MATNR+DILD ALLRPGRIDRKIE
Sbjct: 257 RVE-GSGGGDSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIE 315
Query: 181 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 240
FP P+ +R +IL+IHSR+MNL RGI+L+K+AEKMNG SGA++K VCTEAGM+ALRERRI
Sbjct: 316 FPPPSVAARAEILRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRERRI 375
Query: 241 HVTQEDFEMAVAKVMKKETEKNMSLRKLWK 270
HVTQEDFE+AV KVM K E +S+ KL+K
Sbjct: 376 HVTQEDFELAVGKVMNKNQETAISVAKLFK 405
>sp|Q8SQK0|PRS8_ENCCU 26S protease regulatory subunit 8 homolog OS=Encephalitozoon
cuniculi (strain GB-M1) GN=RPT6 PE=1 SV=1
Length = 453
Score = 457 bits (1177), Expect = e-128, Method: Compositional matrix adjust.
Identities = 224/270 (82%), Positives = 243/270 (90%), Gaps = 1/270 (0%)
Query: 1 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 60
M VEKVPDSTY MIGGLD+QIKEI+EVIELPIKHPELFE+LGIAQPKGVLLYGPPGTGKT
Sbjct: 185 MMVEKVPDSTYQMIGGLDEQIKEIREVIELPIKHPELFENLGIAQPKGVLLYGPPGTGKT 244
Query: 61 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 120
LLARAVAHHT C FIRVSGSELVQKYIGEGSR+VRELF+MAREHAPSIIFMDEIDSIGS
Sbjct: 245 LLARAVAHHTQCKFIRVSGSELVQKYIGEGSRLVRELFIMAREHAPSIIFMDEIDSIGST 304
Query: 121 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 180
R +S G+ DSEVQRTMLELLNQLDGFE+ N IKV+MATNRIDILD ALLR GRIDRKIE
Sbjct: 305 RGDSNKGS-DSEVQRTMLELLNQLDGFESHNNIKVIMATNRIDILDPALLRTGRIDRKIE 363
Query: 181 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 240
FP PNE +RL+ILKIHSR+MNL +GIDL+ IA KM G SGAE+KAVCTEAGM+ALRERR+
Sbjct: 364 FPPPNESARLEILKIHSRKMNLTKGIDLETIASKMVGCSGAEVKAVCTEAGMYALRERRV 423
Query: 241 HVTQEDFEMAVAKVMKKETEKNMSLRKLWK 270
HVTQEDFEMAV KV+KK + N LRKL K
Sbjct: 424 HVTQEDFEMAVHKVLKKTGDLNSDLRKLLK 453
>sp|P41836|PRS8_SCHPO 26S protease regulatory subunit 8 homolog OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=let1 PE=3 SV=1
Length = 403
Score = 445 bits (1144), Expect = e-124, Method: Compositional matrix adjust.
Identities = 227/270 (84%), Positives = 248/270 (91%)
Query: 1 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 60
M VEK+PDSTY+M+GGL++QIKEIKEVIELP+KHPELFESLGI QPKG+LLYGPPGTGKT
Sbjct: 134 MMVEKIPDSTYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKT 193
Query: 61 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 120
LLARAVAHHTDC FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS+
Sbjct: 194 LLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSS 253
Query: 121 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 180
R +S G+GDSEVQRTMLELLNQLDGFEA+ IKV+MATNRIDILD ALLRPGRIDRKIE
Sbjct: 254 RSDSSGGSGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIE 313
Query: 181 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 240
FP P+ E+R +IL+IHSR MNL RGIDLK IAEKMNGASGAELK VCTEAGMFALRERR+
Sbjct: 314 FPPPSAEARAEILRIHSRSMNLTRGIDLKSIAEKMNGASGAELKGVCTEAGMFALRERRV 373
Query: 241 HVTQEDFEMAVAKVMKKETEKNMSLRKLWK 270
HVTQEDFE+AVAKV+ K MSL+KL+K
Sbjct: 374 HVTQEDFELAVAKVLNKGDSGEMSLQKLFK 403
>sp|Q8TX03|PAN_METKA Proteasome-activating nucleotidase OS=Methanopyrus kandleri (strain
AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=pan PE=3
SV=1
Length = 436
Score = 338 bits (868), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 162/269 (60%), Positives = 213/269 (79%), Gaps = 1/269 (0%)
Query: 1 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 60
M+V++ PD +YD IGGLD+QI+EI+EV+E P+K PELFE +G+ PKGVLLYGPPGTGKT
Sbjct: 168 MEVDESPDVSYDDIGGLDEQIREIREVVEKPLKEPELFEKVGVEPPKGVLLYGPPGTGKT 227
Query: 61 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 120
LLA+AVA+H D TFIR++ ELVQK+IGEG+R+VRELF +ARE APSIIF+DEID+IG+
Sbjct: 228 LLAKAVANHADATFIRLAAPELVQKFIGEGARLVRELFELAREKAPSIIFIDEIDAIGAR 287
Query: 121 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 180
RM + +GD EVQRT+ +LL ++DGF+ + IKV+ ATNR DILD ALLRPGR DR I+
Sbjct: 288 RMRDAT-SGDREVQRTLTQLLAEMDGFDPLDDIKVIAATNRKDILDPALLRPGRFDRHIK 346
Query: 181 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 240
P P+EE R +I KIH+R MNL +DL+K+A+ GASGA++KA+CTEAGM A+RE R
Sbjct: 347 IPLPDEEGRYEIFKIHTRDMNLAEDVDLQKLAKITEGASGADIKAICTEAGMMAIREDRD 406
Query: 241 HVTQEDFEMAVAKVMKKETEKNMSLRKLW 269
VT +DF AV +VM K+ E++ ++ +
Sbjct: 407 IVTMDDFLKAVDRVMGKKEEESGEFKRAY 435
>sp|P62193|PRS4_RAT 26S protease regulatory subunit 4 OS=Rattus norvegicus GN=Psmc1
PE=2 SV=1
Length = 440
Score = 333 bits (854), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 158/260 (60%), Positives = 204/260 (78%), Gaps = 1/260 (0%)
Query: 1 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 60
MKVEK P TY IGGLD QI+EIKE +ELP+ HPE +E +GI PKGV+LYGPPGTGKT
Sbjct: 174 MKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKT 233
Query: 61 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 120
LLA+AVA+ T TF+RV GSEL+QKY+G+G ++VRELF +A EHAPSI+F+DEID+IG+
Sbjct: 234 LLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTK 293
Query: 121 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 180
R +S SG G+ E+QRTMLELLNQLDGF++ +KV+MATNRI+ LD AL+RPGRIDRKIE
Sbjct: 294 RYDSNSG-GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIE 352
Query: 181 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 240
FP P+E+++ I +IH+ RM L + L + + SGA++KA+CTEAG+ ALRERR+
Sbjct: 353 FPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRM 412
Query: 241 HVTQEDFEMAVAKVMKKETE 260
VT EDF+ + V+ K+ E
Sbjct: 413 KVTNEDFKKSKENVLYKKQE 432
>sp|P62192|PRS4_MOUSE 26S protease regulatory subunit 4 OS=Mus musculus GN=Psmc1 PE=1
SV=1
Length = 440
Score = 333 bits (854), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 158/260 (60%), Positives = 204/260 (78%), Gaps = 1/260 (0%)
Query: 1 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 60
MKVEK P TY IGGLD QI+EIKE +ELP+ HPE +E +GI PKGV+LYGPPGTGKT
Sbjct: 174 MKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKT 233
Query: 61 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 120
LLA+AVA+ T TF+RV GSEL+QKY+G+G ++VRELF +A EHAPSI+F+DEID+IG+
Sbjct: 234 LLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTK 293
Query: 121 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 180
R +S SG G+ E+QRTMLELLNQLDGF++ +KV+MATNRI+ LD AL+RPGRIDRKIE
Sbjct: 294 RYDSNSG-GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIE 352
Query: 181 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 240
FP P+E+++ I +IH+ RM L + L + + SGA++KA+CTEAG+ ALRERR+
Sbjct: 353 FPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRM 412
Query: 241 HVTQEDFEMAVAKVMKKETE 260
VT EDF+ + V+ K+ E
Sbjct: 413 KVTNEDFKKSKENVLYKKQE 432
>sp|P62191|PRS4_HUMAN 26S protease regulatory subunit 4 OS=Homo sapiens GN=PSMC1 PE=1
SV=1
Length = 440
Score = 333 bits (854), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 158/260 (60%), Positives = 204/260 (78%), Gaps = 1/260 (0%)
Query: 1 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 60
MKVEK P TY IGGLD QI+EIKE +ELP+ HPE +E +GI PKGV+LYGPPGTGKT
Sbjct: 174 MKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKT 233
Query: 61 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 120
LLA+AVA+ T TF+RV GSEL+QKY+G+G ++VRELF +A EHAPSI+F+DEID+IG+
Sbjct: 234 LLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTK 293
Query: 121 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 180
R +S SG G+ E+QRTMLELLNQLDGF++ +KV+MATNRI+ LD AL+RPGRIDRKIE
Sbjct: 294 RYDSNSG-GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIE 352
Query: 181 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 240
FP P+E+++ I +IH+ RM L + L + + SGA++KA+CTEAG+ ALRERR+
Sbjct: 353 FPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRM 412
Query: 241 HVTQEDFEMAVAKVMKKETE 260
VT EDF+ + V+ K+ E
Sbjct: 413 KVTNEDFKKSKENVLYKKQE 432
>sp|P48601|PRS4_DROME 26S protease regulatory subunit 4 OS=Drosophila melanogaster
GN=Pros26.4 PE=2 SV=2
Length = 439
Score = 331 bits (849), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 155/260 (59%), Positives = 205/260 (78%), Gaps = 1/260 (0%)
Query: 1 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 60
MK+EK P TY IGGLD QI+EIKE +ELP+ HPE +E +GI PKGV+LYGPPGTGKT
Sbjct: 173 MKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKT 232
Query: 61 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 120
LLA+AVA+ T TF+RV GSEL+QKY+G+G ++VRELF +A EHAPSI+F+DEID++G+
Sbjct: 233 LLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTK 292
Query: 121 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 180
R +S SG G+ E+QRTMLELLNQLDGF++ +KV+MATNRI+ LD AL+RPGRIDRKIE
Sbjct: 293 RYDSNSG-GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIE 351
Query: 181 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 240
FP P+E+++ I IH+ RM L ++L ++ + SGA++KA+CTEAG+ ALRERR+
Sbjct: 352 FPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRM 411
Query: 241 HVTQEDFEMAVAKVMKKETE 260
VT EDF+ + V+ ++ E
Sbjct: 412 KVTNEDFKKSKESVLYRKKE 431
>sp|Q90732|PRS4_CHICK 26S protease regulatory subunit 4 OS=Gallus gallus GN=PSMC1 PE=2
SV=1
Length = 440
Score = 330 bits (847), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 156/260 (60%), Positives = 204/260 (78%), Gaps = 1/260 (0%)
Query: 1 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 60
MK+EK P TY IGGLD QI+EIKE +ELP+ HPE +E +GI PKGV+LYGPPGTGKT
Sbjct: 174 MKLEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKT 233
Query: 61 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 120
LLA+AVA+ T TF+RV GSEL+QKY+G+G ++VRELF +A EH PSI+F+DEID+IG+
Sbjct: 234 LLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGTK 293
Query: 121 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 180
R +S SG G+ E+QRTMLELLNQLDGF++ +KV+MATNRI+ LD AL+RPGRIDRKIE
Sbjct: 294 RYDSNSG-GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIE 352
Query: 181 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 240
FP P+E+++ I +IH+ RM L + L ++ + SGA++KA+CTEAG+ ALRERR+
Sbjct: 353 FPLPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRM 412
Query: 241 HVTQEDFEMAVAKVMKKETE 260
VT EDF+ + + K+TE
Sbjct: 413 KVTNEDFKKSKENFLYKKTE 432
>sp|O57940|PAN_PYRHO Proteasome-activating nucleotidase OS=Pyrococcus horikoshii (strain
ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=pan PE=3 SV=1
Length = 399
Score = 329 bits (844), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 159/252 (63%), Positives = 204/252 (80%), Gaps = 2/252 (0%)
Query: 7 PDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAV 66
P+ TY+ IGGL +Q++E++E IELP+KHPELFE +GI PKGVLLYGPPG GKTL+A+A+
Sbjct: 135 PNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKAL 194
Query: 67 AHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGS 126
AH + TFIRV GSELV+KYIGEG+R+V ELF +A+E AP+IIF+DEID+IG+ RM+ +
Sbjct: 195 AHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETT 254
Query: 127 GNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNE 186
G G+ EV RT+++LL ++DGF+ +KV+ ATNR DILD ALLRPGR DR IE P P+
Sbjct: 255 G-GEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDF 313
Query: 187 ESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQED 246
E RL+ILK+H+RRM L +G+DL+ IAE GASGA+LKA+ TEAGMFA+RERR +VTQED
Sbjct: 314 EGRLEILKVHTRRMKL-KGVDLRAIAEMTEGASGADLKAIATEAGMFAIRERRTYVTQED 372
Query: 247 FEMAVAKVMKKE 258
F AV KV+ E
Sbjct: 373 FLKAVDKVLGNE 384
>sp|Q8U4H3|PAN_PYRFU Proteasome-activating nucleotidase OS=Pyrococcus furiosus (strain
ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=pan PE=3 SV=1
Length = 396
Score = 328 bits (842), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 158/252 (62%), Positives = 204/252 (80%), Gaps = 2/252 (0%)
Query: 7 PDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAV 66
P+ TY+ IGGL +Q++E++E IELP+KHPELFE +GI PKGVLLYGPPG GKTL+A+A+
Sbjct: 132 PNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKAI 191
Query: 67 AHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGS 126
AH + TFIRV GSELV+KYIGEG+R+V ELF +A+E AP+IIF+DEID+IG+ R++ +
Sbjct: 192 AHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRLDETT 251
Query: 127 GNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNE 186
G G+ EV RT+++LL ++DGF+ +KV+ ATNR DILD ALLRPGR DR IE P P+
Sbjct: 252 G-GEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDF 310
Query: 187 ESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQED 246
E RL+ILK+H+RRM L RG+DL+ IAE GASGA+LKA+ TEAGMFA+RERR +VTQED
Sbjct: 311 EGRLEILKVHTRRMKL-RGVDLRLIAELTEGASGADLKAIATEAGMFAIRERRTYVTQED 369
Query: 247 FEMAVAKVMKKE 258
F A+ KV+ E
Sbjct: 370 FLKAIDKVLGNE 381
>sp|B6YXR2|PAN_THEON Proteasome-activating nucleotidase OS=Thermococcus onnurineus
(strain NA1) GN=pan PE=3 SV=1
Length = 398
Score = 327 bits (838), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 157/252 (62%), Positives = 206/252 (81%), Gaps = 2/252 (0%)
Query: 7 PDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAV 66
P +Y+ IGGLD+Q++E++E IELP+KHPELFE +GI PKGVLLYGPPG GKTL+A+A+
Sbjct: 134 PTVSYNDIGGLDKQLQELREAIELPLKHPELFEKVGIEPPKGVLLYGPPGCGKTLMAKAL 193
Query: 67 AHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGS 126
AH + TFIRV GSELV+K+IGEG+R+V ELF +A+E AP+IIF+DEID+IG+ RM+ +
Sbjct: 194 AHEVNATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPAIIFIDEIDAIGAKRMDETT 253
Query: 127 GNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNE 186
G G+ EV RT+++LL ++DGF+ S +K++ ATNR DILD ALLRPGR DR IE P PN
Sbjct: 254 G-GEREVNRTLMQLLAEMDGFDPSGNVKIIAATNRPDILDPALLRPGRFDRLIEVPLPNF 312
Query: 187 ESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQED 246
+SRL+ILKIH++RMNL +G+DL+ IAE GASGA+LKA+ EAGMFA+R+RR +VTQED
Sbjct: 313 KSRLEILKIHTKRMNL-KGVDLRIIAEMTEGASGADLKAITMEAGMFAIRDRREYVTQED 371
Query: 247 FEMAVAKVMKKE 258
F A+ KV+ E
Sbjct: 372 FLKAIEKVLGSE 383
>sp|O16368|PRS4_CAEEL Probable 26S protease regulatory subunit 4 OS=Caenorhabditis
elegans GN=rpt-2 PE=3 SV=1
Length = 443
Score = 327 bits (837), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 154/260 (59%), Positives = 207/260 (79%), Gaps = 1/260 (0%)
Query: 1 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 60
MK+EK P TY +GGLDQQI+EIKE +ELP+ HPE +E +GI PKGV+LYG PGTGKT
Sbjct: 177 MKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKT 236
Query: 61 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 120
LLA+AVA+ T TF+R+ GSEL+QKY+G+G +MVRELF +A E+APSI+F+DEID++G+
Sbjct: 237 LLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTK 296
Query: 121 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 180
R +S SG G+ E+QRTMLELLNQLDGF++ +KVLMATNRI+ LD AL+RPGRIDRKIE
Sbjct: 297 RYDSNSG-GEREIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIE 355
Query: 181 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 240
FP P+E+++ I +IH+ RM L + ++L++ + SGA++KA+CTEAG+ ALRERR+
Sbjct: 356 FPLPDEKTKRRIFQIHTSRMTLGKEVNLEEFITAKDELSGADIKAMCTEAGLLALRERRM 415
Query: 241 HVTQEDFEMAVAKVMKKETE 260
VT EDF+ + V+ ++ E
Sbjct: 416 RVTMEDFQKSKENVLYRKKE 435
>sp|Q5JHS5|PAN_PYRKO Proteasome-activating nucleotidase OS=Pyrococcus kodakaraensis
(strain ATCC BAA-918 / JCM 12380 / KOD1) GN=pan PE=3
SV=1
Length = 397
Score = 327 bits (837), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 156/252 (61%), Positives = 206/252 (81%), Gaps = 2/252 (0%)
Query: 7 PDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAV 66
P TY+ IGGL++Q++E++E IELP+KHPELFE +GI PKGVLLYGPPG GKTL+A+AV
Sbjct: 133 PKVTYNDIGGLEKQLQELREAIELPLKHPELFEQVGIEPPKGVLLYGPPGCGKTLMAKAV 192
Query: 67 AHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGS 126
A+H + TFIRV GSELV+K+IGEG+R+V ELF +A+E AP+IIF+DEID+IG+ RM+ +
Sbjct: 193 ANHVNATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETT 252
Query: 127 GNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNE 186
G G+ EV RT+++LL ++DGF+ +KV+ ATNR DILD ALLRPGR DR IE P P+
Sbjct: 253 G-GEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDY 311
Query: 187 ESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQED 246
+ RL+ILK+H+R+MNL +G+DL+ IAE GASGA+LKA+ TEAGMFA+R+RR +VTQ+D
Sbjct: 312 QGRLEILKVHTRKMNL-KGVDLRVIAEITEGASGADLKAIATEAGMFAIRDRRTYVTQDD 370
Query: 247 FEMAVAKVMKKE 258
F AV KV+ E
Sbjct: 371 FLKAVDKVIGSE 382
>sp|Q9V287|PAN_PYRAB Proteasome-activating nucleotidase OS=Pyrococcus abyssi (strain GE5
/ Orsay) GN=pan PE=3 SV=2
Length = 396
Score = 325 bits (834), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 158/252 (62%), Positives = 203/252 (80%), Gaps = 2/252 (0%)
Query: 7 PDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAV 66
P+ TY+ IGGL +Q++E++E IELP+KHPELFE +GI PKGVLLYGPPG GKTL+A+A+
Sbjct: 132 PNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKAL 191
Query: 67 AHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGS 126
AH + TFIRV GSELV+KYIGEG+R+V ELF +A+E AP+IIF+DEID+IG+ RM+ +
Sbjct: 192 AHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETT 251
Query: 127 GNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNE 186
G G+ EV RT+++LL ++DGF+ +KV+ ATNR DILD ALLRPGR DR IE P P+
Sbjct: 252 G-GEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDF 310
Query: 187 ESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQED 246
E RL+ILK+H+RRM L + +DL+ IAE GASGA+LKA+ TEAGMFA+RERR +VTQED
Sbjct: 311 EGRLEILKVHTRRMKL-KNVDLRVIAEITEGASGADLKAIATEAGMFAIRERRTYVTQED 369
Query: 247 FEMAVAKVMKKE 258
F AV KV+ E
Sbjct: 370 FLKAVDKVLGNE 381
>sp|O28303|PAN_ARCFU Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus
(strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC
100126) GN=pan PE=1 SV=1
Length = 398
Score = 324 bits (830), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 157/259 (60%), Positives = 199/259 (76%), Gaps = 1/259 (0%)
Query: 1 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 60
+VE+ P+ +Y+ IGGLD QI+EI+E +ELP+ PELF +GI PKGVLLYGPPGTGKT
Sbjct: 130 FEVEEKPEVSYEDIGGLDVQIEEIREAVELPLLKPELFAEVGIEPPKGVLLYGPPGTGKT 189
Query: 61 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 120
LLA+AVA+ T TFIRV GSE VQKYIGEG+R+VRE+F +A+E APSIIF+DE+D+I +
Sbjct: 190 LLAKAVANQTRATFIRVVGSEFVQKYIGEGARLVREVFQLAKEKAPSIIFIDELDAIAAR 249
Query: 121 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 180
R S + +GD EVQRTM++LL +LDGF+ +KV+ ATNRIDILD A+LRPGR DR IE
Sbjct: 250 RTNSDT-SGDREVQRTMMQLLAELDGFDPRGDVKVIGATNRIDILDPAILRPGRFDRIIE 308
Query: 181 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 240
P P E R+ I KIH+R+M L +D K++A GASGA++KA+CTEAGMFA+RE R
Sbjct: 309 VPLPTFEGRIQIFKIHTRKMKLAEDVDFKELARITEGASGADIKAICTEAGMFAIREERA 368
Query: 241 HVTQEDFEMAVAKVMKKET 259
VT DF A+ KV+KK T
Sbjct: 369 KVTMLDFTKAIEKVLKKTT 387
>sp|O64982|PRS7_PRUPE 26S protease regulatory subunit 7 OS=Prunus persica GN=RPT1 PE=2
SV=1
Length = 425
Score = 323 bits (829), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 159/256 (62%), Positives = 197/256 (76%), Gaps = 1/256 (0%)
Query: 1 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 60
M VE+ PD TY+ +GG +QI++++EV+ELP+ HPE F LGI PKGVL YGPPGTGKT
Sbjct: 156 MTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKT 215
Query: 61 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 120
LLARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR I+F DE+D+IG A
Sbjct: 216 LLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGA 275
Query: 121 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 180
R + G G GD+EVQRTMLE++NQLDGF+A IKVLMATNR D LD ALLRPGR+DRK+E
Sbjct: 276 RFDDGVG-GDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVE 334
Query: 181 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 240
F P+ ESR I KIH+R MN R I + +A ++GA++++VCTEAGM+A+R RR
Sbjct: 335 FGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRK 394
Query: 241 HVTQEDFEMAVAKVMK 256
VT++DF AV KV+K
Sbjct: 395 TVTEKDFLDAVNKVIK 410
>sp|Q55BV5|PRS4_DICDI 26S protease regulatory subunit 4 homolog OS=Dictyostelium
discoideum GN=psmC1 PE=1 SV=1
Length = 439
Score = 323 bits (828), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 152/259 (58%), Positives = 205/259 (79%), Gaps = 1/259 (0%)
Query: 1 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 60
MKVEK P +Y IGGL+ Q++E+KE IELP+ HPEL+E +GI PKGV+LYG PGTGKT
Sbjct: 173 MKVEKAPTESYSDIGGLEAQVQEMKEAIELPLTHPELYEEIGIKPPKGVILYGEPGTGKT 232
Query: 61 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 120
LLA+AVA+ T TF+RV GSEL+QKY+G+G ++VRELF +A E APSI+F+DEID++G+
Sbjct: 233 LLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADECAPSIVFIDEIDAVGTK 292
Query: 121 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 180
R +S SG G+ E+QRTMLELLNQLDGF+A +KV+MATNRI+ LD AL+RPGRIDRKIE
Sbjct: 293 RYDSQSG-GEREIQRTMLELLNQLDGFDARTDVKVIMATNRIETLDPALIRPGRIDRKIE 351
Query: 181 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 240
FP P+ +++ I +IH+ +MNL ++L++ + SGA++KA+CTE+G+ ALRERR+
Sbjct: 352 FPLPDIKTKRKIFEIHTAKMNLSEDVNLEEFVMSKDDLSGADIKAICTESGLLALRERRM 411
Query: 241 HVTQEDFEMAVAKVMKKET 259
VT DF+ A KV+ ++T
Sbjct: 412 RVTHTDFKKAKEKVLYRKT 430
>sp|Q9SSB5|PRS7A_ARATH 26S protease regulatory subunit 7 homolog A OS=Arabidopsis thaliana
GN=RPT1A PE=2 SV=1
Length = 426
Score = 323 bits (828), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 159/256 (62%), Positives = 197/256 (76%), Gaps = 1/256 (0%)
Query: 1 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 60
M VE+ PD TY+ +GG +QI++++EV+ELP+ HPE F LGI PKGVL YGPPGTGKT
Sbjct: 157 MTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKT 216
Query: 61 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 120
LLARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR I+F DE+D+IG A
Sbjct: 217 LLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGA 276
Query: 121 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 180
R + G G GD+EVQRTMLE++NQLDGF+A IKVLMATNR D LD ALLRPGR+DRK+E
Sbjct: 277 RFDDGVG-GDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVE 335
Query: 181 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 240
F P+ ESR I KIH+R MN R I + +A ++GA++++VCTEAGM+A+R RR
Sbjct: 336 FGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRK 395
Query: 241 HVTQEDFEMAVAKVMK 256
VT++DF AV KV+K
Sbjct: 396 TVTEKDFLDAVNKVIK 411
>sp|Q58576|PAN_METJA Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=pan PE=1 SV=1
Length = 430
Score = 322 bits (825), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 152/255 (59%), Positives = 208/255 (81%), Gaps = 1/255 (0%)
Query: 1 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 60
M+V++ P+ Y+ IGGL++Q++EI+EV+ELP+KHPELFE +GI PKG+LLYGPPGTGKT
Sbjct: 159 MEVDERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKT 218
Query: 61 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 120
LLA+AVA T+ TFIRV GSELV+K+IGEG+ +V+++F +A+E APSIIF+DEID+I +
Sbjct: 219 LLAKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAK 278
Query: 121 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 180
R ++ +G GD EVQRT+++LL ++DGF+A +K++ ATNR DILD A+LRPGR DR IE
Sbjct: 279 RTDALTG-GDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIE 337
Query: 181 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 240
P P+E+ RL+ILKIH+R+MNL ++L++IA+ G GAELKA+CTEAGM A+RE R
Sbjct: 338 VPAPDEKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRD 397
Query: 241 HVTQEDFEMAVAKVM 255
+VT +DF AV K+M
Sbjct: 398 YVTMDDFRKAVEKIM 412
>sp|C5A6P8|PAN_THEGJ Proteasome-activating nucleotidase OS=Thermococcus gammatolerans
(strain DSM 15229 / JCM 11827 / EJ3) GN=pan PE=3 SV=1
Length = 397
Score = 322 bits (824), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 156/252 (61%), Positives = 201/252 (79%), Gaps = 2/252 (0%)
Query: 7 PDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAV 66
P TY IGGL++Q+ E++E +ELP+KHPELFE +GI PKGVLLYGPPG GKTL+A+AV
Sbjct: 133 PRVTYQDIGGLERQLAELREAVELPLKHPELFEKVGIEPPKGVLLYGPPGCGKTLMAKAV 192
Query: 67 AHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGS 126
A+H + TFIRV GSELV+K+IGEG+R+V ELF MA+E AP+IIF+DEID+IG+ RM+ +
Sbjct: 193 ANHVNATFIRVVGSELVRKFIGEGARLVHELFEMAKEKAPTIIFIDEIDAIGAKRMDETT 252
Query: 127 GNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNE 186
G G+ EV RT+++LL ++DGF+ +KV+ ATNR DILD ALLRPGR DR IE P P+
Sbjct: 253 G-GEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDF 311
Query: 187 ESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQED 246
RL+ILK+H+R+MNL R +DL IA+ GASGA+LKA+ TEAGMFA+R+RR +VTQED
Sbjct: 312 RGRLEILKVHTRKMNL-RNVDLSIIADITEGASGADLKAIATEAGMFAIRDRRTYVTQED 370
Query: 247 FEMAVAKVMKKE 258
F AV KV+ E
Sbjct: 371 FLKAVDKVLGAE 382
>sp|Q9FXT9|PRS7_ORYSJ 26S protease regulatory subunit 7 OS=Oryza sativa subsp. japonica
GN=RPT1A PE=2 SV=1
Length = 426
Score = 322 bits (824), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 158/256 (61%), Positives = 196/256 (76%), Gaps = 1/256 (0%)
Query: 1 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 60
M VE+ PD TY+ +GG +QI++++EV+ELP+ HPE F LGI PKGVL YGPPGTGKT
Sbjct: 157 MTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKT 216
Query: 61 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 120
LLARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR I+F DE+D+IG A
Sbjct: 217 LLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGA 276
Query: 121 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 180
R + G G GD+EVQRTMLE++NQLDGF+A IKVLMATNR D LD ALLRPGR+DRK+E
Sbjct: 277 RFDDGVG-GDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVE 335
Query: 181 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 240
F P+ E R I KIH+R MN R I + +A ++GA++++VCTEAGM+A+R RR
Sbjct: 336 FGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRK 395
Query: 241 HVTQEDFEMAVAKVMK 256
VT++DF AV KV+K
Sbjct: 396 TVTEKDFLDAVNKVIK 411
>sp|Q41365|PRS7_SPIOL 26S protease regulatory subunit 7 OS=Spinacia oleracea GN=RPT1 PE=2
SV=1
Length = 426
Score = 321 bits (823), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 158/256 (61%), Positives = 196/256 (76%), Gaps = 1/256 (0%)
Query: 1 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 60
M VE+ PD TY+ +GG +QI++++EV+ELP+ HPE F LGI PKGVL YGPPGTGKT
Sbjct: 157 MTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKT 216
Query: 61 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 120
LLARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR I+F DE+D+IG A
Sbjct: 217 LLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGA 276
Query: 121 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 180
R + G G GD+EVQRTMLE++NQLDGF+A IKVLMATNR D LD ALLRPGR+DRK+E
Sbjct: 277 RFDDGVG-GDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVE 335
Query: 181 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 240
F P+ E R I KIH+R MN R I + +A ++GA++++VCTEAGM+A+R RR
Sbjct: 336 FGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRK 395
Query: 241 HVTQEDFEMAVAKVMK 256
VT++DF AV KV+K
Sbjct: 396 TVTEKDFLDAVNKVIK 411
>sp|O26824|PAN_METTH Proteasome-activating nucleotidase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=pan PE=3 SV=1
Length = 410
Score = 320 bits (821), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 153/261 (58%), Positives = 205/261 (78%), Gaps = 1/261 (0%)
Query: 1 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 60
M+VE+ PD +Y+ IGGL++Q++E+KE +ELP+K PELFE +GI PKGVLLYGPPGTGKT
Sbjct: 140 MEVEEKPDVSYEQIGGLEEQVREVKETVELPLKKPELFEKIGIEPPKGVLLYGPPGTGKT 199
Query: 61 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 120
LLA+AVAH T+ TFI++ SE V+KYIGEG+R+VR +F +A+E +PSIIF+DEID++ +
Sbjct: 200 LLAKAVAHETNATFIKIVASEFVRKYIGEGARLVRGVFELAKEKSPSIIFIDEIDAVAAK 259
Query: 121 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 180
R++S S +GD EVQRT+++LL +LDGFE+ + ++ ATNR DILD ALLRPGR DR IE
Sbjct: 260 RLKS-STSGDREVQRTLMQLLAELDGFESRGNVGIVAATNRPDILDPALLRPGRFDRFIE 318
Query: 181 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 240
P PNE+ R +ILKIH+ M L +D++ +A +GASGA+LKA+CTEAGMFA+R+ R
Sbjct: 319 VPLPNEDGRREILKIHTSGMALAEEVDIELLARITDGASGADLKAICTEAGMFAIRDERD 378
Query: 241 HVTQEDFEMAVAKVMKKETEK 261
VT DF AV K+M E E+
Sbjct: 379 EVTMADFMDAVDKIMGVEKEE 399
>sp|P40327|PRS4_YEAST 26S protease regulatory subunit 4 homolog OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RPT2 PE=1
SV=3
Length = 437
Score = 320 bits (820), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 150/263 (57%), Positives = 206/263 (78%), Gaps = 1/263 (0%)
Query: 1 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 60
MK++K P +Y IGGL+ QI+EIKE +ELP+ HPEL+E +GI PKGV+LYG PGTGKT
Sbjct: 171 MKMDKSPTESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKT 230
Query: 61 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 120
LLA+AVA+ T TF+R+ GSEL+QKY+G+G R+ R++F +A E+APSI+F+DEID+IG+
Sbjct: 231 LLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTK 290
Query: 121 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 180
R +S SG G+ E+QRTMLELLNQLDGF+ +KV+MATN+I+ LD AL+RPGRIDRKI
Sbjct: 291 RYDSNSG-GEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKIL 349
Query: 181 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 240
F NP+ ++ IL IH+ +MNL ++L+ + + SGA+++A+CTEAG+ ALRERR+
Sbjct: 350 FENPDLSTKKKILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRERRM 409
Query: 241 HVTQEDFEMAVAKVMKKETEKNM 263
VT EDF+ A +VMK + E+N+
Sbjct: 410 QVTAEDFKQAKERVMKNKVEENL 432
>sp|Q5R8D7|PRS7_PONAB 26S protease regulatory subunit 7 OS=Pongo abelii GN=PSMC2 PE=2
SV=3
Length = 433
Score = 319 bits (817), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 158/256 (61%), Positives = 197/256 (76%), Gaps = 1/256 (0%)
Query: 1 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 60
M+VE+ PD TY +GG +QI++++EV+E P+ HPE F +LGI PKGVLL+GPPGTGKT
Sbjct: 164 MQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 223
Query: 61 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 120
L ARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR +IF DEID+IG A
Sbjct: 224 LCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGA 283
Query: 121 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 180
R + G+G GD+EVQRTMLEL+NQLDGF+ IKVLMATNR D LD AL+RPGR+DRKIE
Sbjct: 284 RFDDGAG-GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIE 342
Query: 181 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 240
F P+ E R ILKIH+R M++ R I + +A ++GAE+++VCTEAGMFA+R RR
Sbjct: 343 FSLPDLEGRTHILKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRK 402
Query: 241 HVTQEDFEMAVAKVMK 256
T++DF AV KV+K
Sbjct: 403 IATEKDFLEAVNKVIK 418
>sp|A9A916|PAN_METM6 Proteasome-activating nucleotidase OS=Methanococcus maripaludis
(strain C6 / ATCC BAA-1332) GN=pan PE=3 SV=1
Length = 407
Score = 319 bits (817), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 149/268 (55%), Positives = 215/268 (80%), Gaps = 2/268 (0%)
Query: 1 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 60
M++E+ PD +++ IGGL+ QI++IKEV+ELP+K+PELFE +GI PKGVLLYGPPGTGKT
Sbjct: 137 MEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKT 196
Query: 61 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 120
LLA+AVA+ T+ +F+RV GSELV+K+IGEG+++VR++F +A+E +P IIF+DEID++ S
Sbjct: 197 LLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASK 256
Query: 121 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 180
R ES +G GD EVQRT+++LL ++DGF++ +K++ ATNR DILD A+LRPGR DR IE
Sbjct: 257 RTESLTG-GDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIE 315
Query: 181 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 240
P+E+ RLDILKIH+ +MNL +G+DL+++A+ GA+LKAVCTEAGMFA+RE R
Sbjct: 316 ISMPDEDGRLDILKIHTEKMNL-KGVDLREVAKLAENMVGADLKAVCTEAGMFAIREERE 374
Query: 241 HVTQEDFEMAVAKVMKKETEKNMSLRKL 268
+ +DF+ A++K+ K+ + + + +L
Sbjct: 375 FIKMDDFKEAISKITGKKEKCSYDMPQL 402
>sp|P46472|PRS7_XENLA 26S protease regulatory subunit 7 OS=Xenopus laevis GN=psmc2 PE=2
SV=1
Length = 433
Score = 318 bits (814), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 158/268 (58%), Positives = 201/268 (75%), Gaps = 1/268 (0%)
Query: 1 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 60
M+VE+ PD TY +GG +QI++++EV+E P+ HPE F +LGI PKGVLL+GPPGTGKT
Sbjct: 164 MQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 223
Query: 61 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 120
L ARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR +IF DEID+IG A
Sbjct: 224 LCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGA 283
Query: 121 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 180
R + G+G GD+EVQRTMLEL+NQLDGF+ IKVLMATNR D LD AL+RPGR+DRKIE
Sbjct: 284 RFDDGAG-GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIE 342
Query: 181 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 240
F P+ E R I KIH+R M++ R I + +A ++GAE+++VCTEAGMFA+R RR
Sbjct: 343 FSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRK 402
Query: 241 HVTQEDFEMAVAKVMKKETEKNMSLRKL 268
T++DF AV KV+K + + + R +
Sbjct: 403 VATEKDFLEAVNKVIKSYAKFSATPRYM 430
>sp|A4G0S4|PAN_METM5 Proteasome-activating nucleotidase OS=Methanococcus maripaludis
(strain C5 / ATCC BAA-1333) GN=pan PE=3 SV=1
Length = 407
Score = 318 bits (814), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 149/268 (55%), Positives = 213/268 (79%), Gaps = 2/268 (0%)
Query: 1 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 60
M++E+ PD +++ IGGL+ QI++IKEV+ELP+K+PELFE +GI PKGVLLYGPPGTGKT
Sbjct: 137 MEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKT 196
Query: 61 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 120
LLA+AVA+ T+ +F+RV GSELV+K+IGEG+++VR++F +A+E +P IIF+DEID++ S
Sbjct: 197 LLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASK 256
Query: 121 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 180
R ES +G GD EVQRT+++LL ++DGF++ +K++ ATNR DILD A+LRPGR DR IE
Sbjct: 257 RTESLTG-GDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIE 315
Query: 181 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 240
P+E+ RLDILKIH+ +MNL +G+DL+++A+ GA+LKAVCTEAGMFA+RE R
Sbjct: 316 ISMPDEDGRLDILKIHTEKMNL-KGVDLREVAKIAENMVGADLKAVCTEAGMFAIREERE 374
Query: 241 HVTQEDFEMAVAKVMKKETEKNMSLRKL 268
+ +DF A+ K+ K+ + + + +L
Sbjct: 375 FIKMDDFREAITKITGKKEKCSYDMPQL 402
>sp|P46471|PRS7_MOUSE 26S protease regulatory subunit 7 OS=Mus musculus GN=Psmc2 PE=1
SV=5
Length = 433
Score = 317 bits (813), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 157/256 (61%), Positives = 196/256 (76%), Gaps = 1/256 (0%)
Query: 1 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 60
M+VE+ PD TY +GG +QI++++EV+E P+ HPE F +LGI PKGVLL+GPPGTGKT
Sbjct: 164 MQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 223
Query: 61 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 120
L ARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR +IF DEID+IG A
Sbjct: 224 LCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGA 283
Query: 121 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 180
R + G+G GD+EVQRTMLEL+NQLDGF+ IKVLMATNR D LD AL+RPGR+DRKIE
Sbjct: 284 RFDDGAG-GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIE 342
Query: 181 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 240
F P+ E R I KIH+R M++ R I + +A ++GAE+++VCTEAGMFA+R RR
Sbjct: 343 FSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRK 402
Query: 241 HVTQEDFEMAVAKVMK 256
T++DF AV KV+K
Sbjct: 403 IATEKDFLEAVNKVIK 418
>sp|Q4R4R0|PRS7_MACFA 26S protease regulatory subunit 7 OS=Macaca fascicularis GN=PSMC2
PE=2 SV=3
Length = 433
Score = 317 bits (813), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 158/268 (58%), Positives = 201/268 (75%), Gaps = 1/268 (0%)
Query: 1 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 60
M+VE+ PD TY +GG +QI++++EV+E P+ HPE F +LGI PKGVLL+GPPGTGKT
Sbjct: 164 MQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 223
Query: 61 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 120
L ARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR +IF DEID+IG A
Sbjct: 224 LCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGA 283
Query: 121 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 180
R + G+G GD+EVQRTMLEL+NQLDGF+ IKVLMATNR D LD AL+RPGR+DRKIE
Sbjct: 284 RFDDGAG-GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIE 342
Query: 181 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 240
F P+ E R I KIH+R M++ R I + +A ++GAE+++VCTEAGMFA+R RR
Sbjct: 343 FSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRK 402
Query: 241 HVTQEDFEMAVAKVMKKETEKNMSLRKL 268
T++DF AV KV+K + + + R +
Sbjct: 403 IATEKDFLEAVNKVIKSYAKFSATPRYM 430
>sp|P35998|PRS7_HUMAN 26S protease regulatory subunit 7 OS=Homo sapiens GN=PSMC2 PE=1
SV=3
Length = 433
Score = 317 bits (813), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 158/268 (58%), Positives = 201/268 (75%), Gaps = 1/268 (0%)
Query: 1 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 60
M+VE+ PD TY +GG +QI++++EV+E P+ HPE F +LGI PKGVLL+GPPGTGKT
Sbjct: 164 MQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 223
Query: 61 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 120
L ARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR +IF DEID+IG A
Sbjct: 224 LCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGA 283
Query: 121 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 180
R + G+G GD+EVQRTMLEL+NQLDGF+ IKVLMATNR D LD AL+RPGR+DRKIE
Sbjct: 284 RFDDGAG-GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIE 342
Query: 181 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 240
F P+ E R I KIH+R M++ R I + +A ++GAE+++VCTEAGMFA+R RR
Sbjct: 343 FSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRK 402
Query: 241 HVTQEDFEMAVAKVMKKETEKNMSLRKL 268
T++DF AV KV+K + + + R +
Sbjct: 403 IATEKDFLEAVNKVIKSYAKFSATPRYM 430
>sp|Q5E9F9|PRS7_BOVIN 26S protease regulatory subunit 7 OS=Bos taurus GN=PSMC2 PE=2 SV=3
Length = 433
Score = 317 bits (813), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 158/268 (58%), Positives = 201/268 (75%), Gaps = 1/268 (0%)
Query: 1 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 60
M+VE+ PD TY +GG +QI++++EV+E P+ HPE F +LGI PKGVLL+GPPGTGKT
Sbjct: 164 MQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 223
Query: 61 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 120
L ARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR +IF DEID+IG A
Sbjct: 224 LCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGA 283
Query: 121 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 180
R + G+G GD+EVQRTMLEL+NQLDGF+ IKVLMATNR D LD AL+RPGR+DRKIE
Sbjct: 284 RFDDGAG-GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIE 342
Query: 181 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 240
F P+ E R I KIH+R M++ R I + +A ++GAE+++VCTEAGMFA+R RR
Sbjct: 343 FSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRK 402
Query: 241 HVTQEDFEMAVAKVMKKETEKNMSLRKL 268
T++DF AV KV+K + + + R +
Sbjct: 403 IATEKDFLEAVNKVIKSYAKFSATPRYM 430
>sp|P46466|PRS4_ORYSJ 26S protease regulatory subunit 4 homolog OS=Oryza sativa subsp.
japonica GN=TBP2 PE=2 SV=2
Length = 448
Score = 317 bits (812), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 154/260 (59%), Positives = 204/260 (78%), Gaps = 1/260 (0%)
Query: 1 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 60
MKVEK P +Y IGGLD QI+EIKE +ELP+ HPEL+E +GI PKGV+LYG PGTGKT
Sbjct: 182 MKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKT 241
Query: 61 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 120
LLA+AVA+ T TF+RV GSEL+QKY+G+G ++VRELF +A E +PSI+F+DEID++G+
Sbjct: 242 LLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADELSPSIVFIDEIDAVGTK 301
Query: 121 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 180
R ++ SG G+ E+QRTMLELLNQLDGF++ +KV++ATNRI+ LD ALLRPGRIDRKIE
Sbjct: 302 RYDAHSG-GEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIE 360
Query: 181 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 240
FP P+ ++R I +IH+ +M L ++L++ + SGA++KA+CTEAG+ ALRERR+
Sbjct: 361 FPLPDIKTRRRIFQIHTSKMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRM 420
Query: 241 HVTQEDFEMAVAKVMKKETE 260
VT DF+ A KVM K+ E
Sbjct: 421 KVTHADFKKAKEKVMFKKKE 440
>sp|Q6LWR0|PAN_METMP Proteasome-activating nucleotidase OS=Methanococcus maripaludis
(strain S2 / LL) GN=pan PE=3 SV=1
Length = 407
Score = 316 bits (810), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 148/268 (55%), Positives = 214/268 (79%), Gaps = 2/268 (0%)
Query: 1 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 60
M++E+ PD +++ IGGL+ QI++IKEV+ELP+K+PELFE +GI PKGVLLYGPPGTGKT
Sbjct: 137 MEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKT 196
Query: 61 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 120
LLA+AVA+ T+ +F+RV GSELV+K+IGEG+++VR++F +A+E +P IIF+DEID++ S
Sbjct: 197 LLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASK 256
Query: 121 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 180
R ES +G GD EVQRT+++LL ++DGF++ +K++ ATNR DILD A+LRPGR DR IE
Sbjct: 257 RTESLTG-GDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIE 315
Query: 181 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 240
P+E+ RL+ILKIH+ +MNL +G+DL+++A+ GA+LKAVCTEAGMFA+RE R
Sbjct: 316 ISMPDEDGRLEILKIHTEKMNL-KGVDLREVAKIAENMVGADLKAVCTEAGMFAIREERE 374
Query: 241 HVTQEDFEMAVAKVMKKETEKNMSLRKL 268
+ +DF A++K+ K+ + + + +L
Sbjct: 375 FIKMDDFREAISKITGKKEKCSYDMPQL 402
>sp|Q9SL67|PRS4B_ARATH 26S proteasome regulatory subunit 4 homolog B OS=Arabidopsis
thaliana GN=RPT2B PE=2 SV=1
Length = 443
Score = 315 bits (807), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 152/260 (58%), Positives = 204/260 (78%), Gaps = 1/260 (0%)
Query: 1 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 60
MKVEK P +Y IGGL+ QI+EIKE +ELP+ HPEL+E +GI PKGV+LYG PGTGKT
Sbjct: 177 MKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKT 236
Query: 61 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 120
LLA+AVA+ T TF+RV GSEL+QKY+G+G ++VRELF +A + +PSI+F+DEID++G+
Sbjct: 237 LLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTK 296
Query: 121 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 180
R ++ SG G+ E+QRTMLELLNQLDGF++ +KV++ATNRI+ LD ALLRPGRIDRKIE
Sbjct: 297 RYDANSG-GEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIE 355
Query: 181 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 240
FP P+ ++R I +IH+ +M L ++L++ + SGA++KA+CTEAG+ ALRERR+
Sbjct: 356 FPLPDIKTRRRIFQIHTSKMTLAEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRM 415
Query: 241 HVTQEDFEMAVAKVMKKETE 260
VT DF+ A KVM K+ E
Sbjct: 416 KVTHVDFKKAKEKVMFKKKE 435
>sp|Q63347|PRS7_RAT 26S protease regulatory subunit 7 OS=Rattus norvegicus GN=Psmc2
PE=1 SV=3
Length = 433
Score = 315 bits (806), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 157/268 (58%), Positives = 200/268 (74%), Gaps = 1/268 (0%)
Query: 1 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 60
M+VE+ PD TY +GG +QI++++EV+E P+ HPE F +LGI PKGVLL+GPPGTGKT
Sbjct: 164 MQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 223
Query: 61 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 120
L ARAVA+ TD FI V GSELVQKY+GEG+RMVRELF MAR +IF DEID+IG A
Sbjct: 224 LCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGA 283
Query: 121 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 180
R + G+G GD+EVQRTMLEL+NQLDGF+ IKVLMATNR D LD AL+RPGR+DRKIE
Sbjct: 284 RFDDGAG-GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIE 342
Query: 181 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 240
F P+ E R I KIH+R M++ R I + +A ++GAE+++VCTEAGMFA+R RR
Sbjct: 343 FSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRK 402
Query: 241 HVTQEDFEMAVAKVMKKETEKNMSLRKL 268
T++DF AV KV+K + + + R +
Sbjct: 403 IATEKDFLEAVNKVIKSYAKFSATPRYM 430
>sp|Q9SZD4|PRS4A_ARATH 26S proteasome regulatory subunit 4 homolog A OS=Arabidopsis
thaliana GN=RPT2A PE=2 SV=1
Length = 443
Score = 315 bits (806), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 152/260 (58%), Positives = 204/260 (78%), Gaps = 1/260 (0%)
Query: 1 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 60
MKVEK P +Y IGGL+ QI+EIKE +ELP+ HPEL+E +GI PKGV+LYG PGTGKT
Sbjct: 177 MKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKT 236
Query: 61 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 120
LLA+AVA+ T TF+RV GSEL+QKY+G+G ++VRELF +A + +PSI+F+DEID++G+
Sbjct: 237 LLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTK 296
Query: 121 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 180
R ++ SG G+ E+QRTMLELLNQLDGF++ +KV++ATNRI+ LD ALLRPGRIDRKIE
Sbjct: 297 RYDAHSG-GEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIE 355
Query: 181 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 240
FP P+ ++R I +IH+ +M L ++L++ + SGA++KA+CTEAG+ ALRERR+
Sbjct: 356 FPLPDIKTRRRIFQIHTSKMTLSEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRM 415
Query: 241 HVTQEDFEMAVAKVMKKETE 260
VT DF+ A KVM K+ E
Sbjct: 416 KVTHPDFKKAKEKVMFKKKE 435
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,384,922
Number of Sequences: 539616
Number of extensions: 4071044
Number of successful extensions: 22691
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 2152
Number of HSP's successfully gapped in prelim test: 809
Number of HSP's that attempted gapping in prelim test: 18663
Number of HSP's gapped (non-prelim): 3682
length of query: 270
length of database: 191,569,459
effective HSP length: 116
effective length of query: 154
effective length of database: 128,974,003
effective search space: 19861996462
effective search space used: 19861996462
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)