Query 024250
Match_columns 270
No_of_seqs 159 out of 1173
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 05:00:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024250.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024250hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rpd_A Methionine synthase (B1 100.0 1.1E-52 3.8E-57 381.5 27.4 253 1-268 82-355 (357)
2 3ppg_A 5-methyltetrahydroptero 100.0 1.1E-52 3.8E-57 409.5 26.1 261 1-266 527-789 (789)
3 1u1j_A 5-methyltetrahydroptero 100.0 1.9E-51 6.6E-56 405.4 27.5 269 1-270 496-765 (765)
4 2nq5_A 5-methyltetrahydroptero 100.0 5.2E-51 1.8E-55 401.2 23.1 267 1-268 481-747 (755)
5 1ypx_A Putative vitamin-B12 in 100.0 2.7E-51 9.3E-56 375.6 18.0 266 1-267 71-369 (375)
6 1t7l_A 5-methyltetrahydroptero 100.0 9.6E-49 3.3E-53 380.3 28.0 266 1-267 500-765 (766)
7 1u1j_A 5-methyltetrahydroptero 100.0 4.2E-41 1.4E-45 331.8 23.2 252 3-264 93-370 (765)
8 3ppg_A 5-methyltetrahydroptero 100.0 3E-39 1E-43 315.2 20.6 251 3-263 115-400 (789)
9 2nq5_A 5-methyltetrahydroptero 100.0 8.9E-39 3E-43 314.4 19.2 249 2-263 93-360 (755)
10 1t7l_A 5-methyltetrahydroptero 100.0 3.7E-34 1.3E-38 278.3 19.9 238 3-264 121-383 (766)
11 2inf_A URO-D, UPD, uroporphyri 99.9 8.4E-22 2.9E-26 179.4 15.6 203 44-265 131-352 (359)
12 1j93_A UROD, uroporphyrinogen 99.8 3.1E-21 1.1E-25 175.2 10.2 202 44-262 130-351 (353)
13 1r3s_A URO-D, uroporphyrinogen 99.8 3.9E-19 1.3E-23 162.2 14.3 204 46-266 136-364 (367)
14 3cyv_A URO-D, UPD, uroporphyri 99.8 1.2E-18 4E-23 158.2 16.8 207 44-267 124-353 (354)
15 2eja_A URO-D, UPD, uroporphyri 99.8 1.3E-18 4.4E-23 157.0 12.7 200 44-262 117-335 (338)
16 4ay7_A Methylcobalamin\: coenz 99.8 1.7E-17 5.9E-22 150.2 18.8 202 44-262 133-346 (348)
17 4exq_A UPD, URO-D, uroporphyri 99.7 2.6E-17 8.9E-22 150.1 15.5 207 44-267 129-363 (368)
18 1aj0_A DHPS, dihydropteroate s 95.9 0.75 2.5E-05 39.7 17.3 151 92-254 40-203 (282)
19 1tx2_A DHPS, dihydropteroate s 95.5 0.63 2.2E-05 40.5 15.7 152 91-254 64-222 (297)
20 1eye_A DHPS 1, dihydropteroate 95.5 0.99 3.4E-05 38.9 16.8 151 93-256 32-197 (280)
21 3cu2_A Ribulose-5-phosphate 3- 94.9 0.24 8.1E-06 41.7 10.6 67 93-178 29-101 (237)
22 3ctl_A D-allulose-6-phosphate 94.1 0.6 2.1E-05 39.0 11.4 141 92-259 15-161 (231)
23 3inp_A D-ribulose-phosphate 3- 93.8 1.3 4.4E-05 37.4 12.8 144 92-259 42-189 (246)
24 1tqj_A Ribulose-phosphate 3-ep 93.5 0.28 9.7E-06 40.9 8.2 74 94-178 21-94 (230)
25 3ovp_A Ribulose-phosphate 3-ep 92.9 2.1 7.3E-05 35.5 12.8 96 92-200 19-117 (228)
26 2vp8_A Dihydropteroate synthas 92.4 5.2 0.00018 35.0 15.4 153 91-258 66-236 (318)
27 3nl6_A Thiamine biosynthetic b 92.3 1.1 3.7E-05 42.3 11.3 66 95-179 30-95 (540)
28 2yci_X 5-methyltetrahydrofolat 92.0 4.4 0.00015 34.6 13.9 146 93-258 37-192 (271)
29 1tqx_A D-ribulose-5-phosphate 91.2 0.81 2.8E-05 38.2 8.1 95 93-202 21-121 (227)
30 3tr9_A Dihydropteroate synthas 90.8 7.8 0.00027 33.8 16.1 152 92-255 51-221 (314)
31 3o63_A Probable thiamine-phosp 89.6 3.5 0.00012 34.6 10.9 69 96-179 49-122 (243)
32 2y5s_A DHPS, dihydropteroate s 88.5 11 0.00039 32.4 16.7 149 93-257 49-212 (294)
33 3k13_A 5-methyltetrahydrofolat 87.1 13 0.00046 32.0 13.2 170 62-258 20-205 (300)
34 1h1y_A D-ribulose-5-phosphate 87.0 8 0.00027 31.7 11.3 73 94-177 23-95 (228)
35 3mcm_A 2-amino-4-hydroxy-6-hyd 86.7 10 0.00035 34.7 12.6 153 92-255 214-385 (442)
36 2vef_A Dihydropteroate synthas 86.4 15 0.00051 32.0 13.1 153 92-259 35-221 (314)
37 4hb7_A Dihydropteroate synthas 84.5 18 0.00062 30.8 17.3 148 94-258 34-189 (270)
38 1rpx_A Protein (ribulose-phosp 83.7 4.8 0.00016 32.9 8.4 71 94-178 27-100 (230)
39 1q7z_A 5-methyltetrahydrofolat 83.7 22 0.00077 33.5 14.0 169 46-242 88-277 (566)
40 1yad_A Regulatory protein TENI 83.6 16 0.00055 29.5 13.0 63 96-178 35-97 (221)
41 1q7z_A 5-methyltetrahydrofolat 83.5 30 0.001 32.6 15.0 141 90-256 340-493 (566)
42 1xi3_A Thiamine phosphate pyro 82.3 17 0.00059 28.9 11.5 66 94-178 30-95 (215)
43 2dqw_A Dihydropteroate synthas 81.6 25 0.00084 30.3 13.2 149 93-255 55-216 (294)
44 2v82_A 2-dehydro-3-deoxy-6-pho 81.5 14 0.00047 29.6 10.3 86 93-201 22-107 (212)
45 2fli_A Ribulose-phosphate 3-ep 78.7 20 0.00069 28.7 10.5 74 94-178 20-93 (220)
46 3l5l_A Xenobiotic reductase A; 77.8 32 0.0011 30.3 12.3 93 85-177 153-267 (363)
47 3hgj_A Chromate reductase; TIM 77.6 31 0.001 30.2 12.0 93 85-177 147-260 (349)
48 1f6y_A 5-methyltetrahydrofolat 77.5 31 0.0011 29.0 13.7 148 91-258 26-183 (262)
49 1ydn_A Hydroxymethylglutaryl-C 76.3 35 0.0012 29.0 12.8 150 92-257 28-195 (295)
50 1thf_D HISF protein; thermophI 74.6 19 0.00063 29.6 9.3 69 97-178 37-105 (253)
51 1z41_A YQJM, probable NADH-dep 74.2 35 0.0012 29.7 11.4 90 85-176 139-249 (338)
52 3gr7_A NADPH dehydrogenase; fl 74.0 44 0.0015 29.1 12.0 88 85-177 139-250 (340)
53 3kru_A NADH:flavin oxidoreduct 72.6 49 0.0017 28.9 12.1 91 85-176 138-249 (343)
54 1vzw_A Phosphoribosyl isomeras 72.4 30 0.001 28.2 10.1 68 97-178 39-106 (244)
55 1vhc_A Putative KHG/KDPG aldol 71.6 40 0.0014 27.6 10.5 84 94-201 33-116 (224)
56 3k2g_A Resiniferatoxin-binding 71.2 12 0.0004 33.2 7.6 91 147-240 204-307 (364)
57 3tn4_A Phosphotriesterase; lac 71.0 37 0.0013 30.0 10.8 89 146-238 206-301 (360)
58 3gtx_A Organophosphorus hydrol 70.3 27 0.00092 30.5 9.7 91 147-240 187-283 (339)
59 3l0g_A Nicotinate-nucleotide p 69.5 6 0.00021 34.3 5.1 61 95-177 219-280 (300)
60 2h9a_B CO dehydrogenase/acetyl 69.3 56 0.0019 28.2 15.8 149 91-258 75-230 (310)
61 3rhg_A Putative phophotriester 69.1 34 0.0012 30.2 10.2 92 147-242 194-299 (365)
62 1h5y_A HISF; histidine biosynt 68.0 20 0.0007 29.0 8.0 71 94-177 37-107 (253)
63 1r30_A Biotin synthase; SAM ra 67.8 53 0.0018 28.6 11.2 66 156-225 155-234 (369)
64 1icp_A OPR1, 12-oxophytodienoa 66.5 47 0.0016 29.4 10.6 27 85-111 162-188 (376)
65 3tqv_A Nicotinate-nucleotide p 65.4 8.3 0.00028 33.2 5.1 61 95-177 210-271 (287)
66 2r14_A Morphinone reductase; H 64.5 51 0.0018 29.2 10.4 27 85-111 161-187 (377)
67 2bmb_A Folic acid synthesis pr 63.0 1E+02 0.0034 28.9 12.8 93 92-190 251-353 (545)
68 1vyr_A Pentaerythritol tetrani 62.9 69 0.0024 28.2 10.9 27 85-111 156-182 (364)
69 1ur4_A Galactanase; hydrolase, 62.8 85 0.0029 28.1 17.6 93 80-179 131-235 (399)
70 1mxs_A KDPG aldolase; 2-keto-3 61.7 58 0.002 26.6 9.5 85 94-202 42-126 (225)
71 4djd_D C/Fe-SP, corrinoid/iron 61.6 81 0.0028 27.4 16.9 144 94-257 84-236 (323)
72 3noy_A 4-hydroxy-3-methylbut-2 60.6 90 0.0031 27.6 11.3 124 91-237 47-185 (366)
73 2tps_A Protein (thiamin phosph 60.5 21 0.00072 28.7 6.7 68 94-177 35-102 (227)
74 2ob3_A Parathion hydrolase; me 60.4 22 0.00075 30.8 7.1 90 147-240 162-270 (330)
75 1wbh_A KHG/KDPG aldolase; lyas 60.3 66 0.0023 26.0 10.0 83 95-201 33-115 (214)
76 2hsa_B 12-oxophytodienoate red 60.2 52 0.0018 29.5 9.7 27 85-111 166-192 (402)
77 3b4u_A Dihydrodipicolinate syn 60.2 63 0.0021 27.4 9.9 122 90-219 24-157 (294)
78 2ffi_A 2-pyrone-4,6-dicarboxyl 59.8 72 0.0025 26.2 12.1 94 147-242 138-241 (288)
79 4i6k_A Amidohydrolase family p 59.2 48 0.0016 27.8 9.0 138 94-244 109-255 (294)
80 2y88_A Phosphoribosyl isomeras 58.8 31 0.0011 28.0 7.4 70 96-179 37-106 (244)
81 3gnn_A Nicotinate-nucleotide p 58.6 13 0.00046 32.0 5.2 61 95-177 221-282 (298)
82 2gou_A Oxidoreductase, FMN-bin 58.5 73 0.0025 28.0 10.3 27 85-111 156-182 (365)
83 3guw_A Uncharacterized protein 57.2 13 0.00046 31.2 4.9 83 147-242 124-212 (261)
84 3paj_A Nicotinate-nucleotide p 56.9 17 0.00059 31.7 5.6 61 95-177 243-304 (320)
85 1rd5_A Tryptophan synthase alp 55.8 24 0.00082 29.3 6.3 24 91-114 33-56 (262)
86 4h3d_A 3-dehydroquinate dehydr 55.0 92 0.0031 25.9 10.4 73 160-237 103-180 (258)
87 3gka_A N-ethylmaleimide reduct 54.4 94 0.0032 27.3 10.2 28 85-112 156-183 (361)
88 3cpr_A Dihydrodipicolinate syn 53.8 72 0.0025 27.2 9.2 80 90-177 37-119 (304)
89 3a5f_A Dihydrodipicolinate syn 53.3 65 0.0022 27.3 8.8 80 90-177 22-104 (291)
90 3ceu_A Thiamine phosphate pyro 53.1 26 0.00089 28.1 5.9 62 94-177 17-78 (210)
91 3s5o_A 4-hydroxy-2-oxoglutarat 53.1 63 0.0022 27.6 8.7 79 90-176 35-116 (307)
92 3flu_A DHDPS, dihydrodipicolin 52.4 60 0.0021 27.6 8.4 80 90-177 28-110 (297)
93 4dnh_A Uncharacterized protein 52.3 22 0.00076 31.2 5.4 60 85-154 132-191 (396)
94 2yw3_A 4-hydroxy-2-oxoglutarat 52.0 89 0.0031 24.9 11.1 81 95-201 30-110 (207)
95 1ka9_F Imidazole glycerol phos 51.8 73 0.0025 25.8 8.7 70 96-178 37-106 (252)
96 4ab4_A Xenobiotic reductase B; 51.7 1.3E+02 0.0043 26.5 10.9 28 85-112 148-175 (362)
97 3m5v_A DHDPS, dihydrodipicolin 51.3 64 0.0022 27.5 8.4 80 90-177 28-111 (301)
98 3a5v_A Alpha-galactosidase; be 50.8 72 0.0025 28.4 9.0 74 99-179 40-132 (397)
99 3l21_A DHDPS, dihydrodipicolin 50.0 60 0.002 27.8 8.0 80 90-177 36-118 (304)
100 3tak_A DHDPS, dihydrodipicolin 49.8 52 0.0018 27.9 7.6 80 90-177 22-104 (291)
101 2ehh_A DHDPS, dihydrodipicolin 49.7 75 0.0026 26.9 8.6 80 90-177 21-103 (294)
102 2ojp_A DHDPS, dihydrodipicolin 49.5 65 0.0022 27.3 8.2 80 90-177 22-104 (292)
103 3pnz_A Phosphotriesterase fami 49.4 1.3E+02 0.0044 26.0 13.0 90 147-241 182-276 (330)
104 1xky_A Dihydrodipicolinate syn 49.4 79 0.0027 26.9 8.7 80 90-177 33-115 (301)
105 3ovg_A Amidohydrolase; structu 49.4 83 0.0028 27.7 9.0 90 147-241 183-278 (363)
106 2ftp_A Hydroxymethylglutaryl-C 49.3 1E+02 0.0034 26.2 9.4 72 94-177 163-236 (302)
107 3fkr_A L-2-keto-3-deoxyarabona 48.6 57 0.0019 28.0 7.7 79 90-176 29-110 (309)
108 2wkj_A N-acetylneuraminate lya 48.5 74 0.0025 27.1 8.4 80 90-177 32-114 (303)
109 3na8_A Putative dihydrodipicol 47.9 56 0.0019 28.1 7.5 79 90-176 45-126 (315)
110 2yxg_A DHDPS, dihydrodipicolin 47.7 69 0.0024 27.1 8.0 80 90-177 21-103 (289)
111 4dpp_A DHDPS 2, dihydrodipicol 47.2 94 0.0032 27.4 9.0 79 90-176 80-161 (360)
112 3iix_A Biotin synthetase, puta 46.9 1.3E+02 0.0046 25.5 13.1 61 159-224 142-218 (348)
113 2r8w_A AGR_C_1641P; APC7498, d 46.7 76 0.0026 27.5 8.3 79 90-176 55-136 (332)
114 3daq_A DHDPS, dihydrodipicolin 46.6 59 0.002 27.6 7.4 80 90-177 23-105 (292)
115 2w6r_A Imidazole glycerol phos 46.6 1.2E+02 0.004 24.8 9.8 70 96-178 36-105 (266)
116 3gg7_A Uncharacterized metallo 46.4 94 0.0032 25.8 8.5 81 147-242 118-201 (254)
117 3qze_A DHDPS, dihydrodipicolin 45.9 66 0.0023 27.7 7.7 80 90-177 44-126 (314)
118 3d0c_A Dihydrodipicolinate syn 45.7 83 0.0029 27.0 8.3 79 90-177 33-114 (314)
119 3si9_A DHDPS, dihydrodipicolin 45.3 75 0.0026 27.3 7.9 80 90-177 43-125 (315)
120 1f6k_A N-acetylneuraminate lya 45.2 90 0.0031 26.4 8.4 80 90-177 24-107 (293)
121 3l5a_A NADH/flavin oxidoreduct 44.5 1.5E+02 0.005 26.7 10.0 93 85-177 165-286 (419)
122 1o5k_A DHDPS, dihydrodipicolin 44.2 86 0.0029 26.8 8.1 80 90-177 33-115 (306)
123 2vc6_A MOSA, dihydrodipicolina 44.1 87 0.003 26.5 8.1 80 90-177 21-103 (292)
124 2v9d_A YAGE; dihydrodipicolini 43.7 77 0.0026 27.7 7.8 80 90-177 52-134 (343)
125 1ydn_A Hydroxymethylglutaryl-C 43.6 90 0.0031 26.3 8.2 10 166-175 221-230 (295)
126 3dz1_A Dihydrodipicolinate syn 43.4 93 0.0032 26.6 8.2 77 90-175 29-108 (313)
127 2ftp_A Hydroxymethylglutaryl-C 43.3 1.5E+02 0.0051 25.1 15.2 149 92-256 32-198 (302)
128 2nx9_A Oxaloacetate decarboxyl 43.2 1.4E+02 0.0047 27.3 9.7 74 91-177 159-234 (464)
129 1qap_A Quinolinic acid phospho 43.1 63 0.0021 27.7 7.0 21 156-176 259-280 (296)
130 1uas_A Alpha-galactosidase; TI 43.0 1.2E+02 0.0039 26.5 9.0 74 99-179 40-133 (362)
131 2rfg_A Dihydrodipicolinate syn 42.3 83 0.0028 26.7 7.7 80 90-177 21-103 (297)
132 3qfe_A Putative dihydrodipicol 41.1 73 0.0025 27.4 7.2 121 90-218 32-163 (318)
133 2y1h_A Putative deoxyribonucle 40.5 1.5E+02 0.005 24.1 9.8 80 147-240 140-219 (272)
134 3nav_A Tryptophan synthase alp 39.6 1.7E+02 0.0058 24.6 12.9 80 92-175 36-131 (271)
135 3ipw_A Hydrolase TATD family p 39.6 1.8E+02 0.0063 25.0 10.0 80 147-241 169-251 (325)
136 1x1o_A Nicotinate-nucleotide p 39.3 40 0.0014 28.8 5.1 60 95-176 208-268 (286)
137 3h5d_A DHDPS, dihydrodipicolin 39.2 1.2E+02 0.0041 25.9 8.3 80 90-177 28-111 (311)
138 3a21_A Putative secreted alpha 39.0 1.2E+02 0.0043 28.5 9.0 74 98-178 42-144 (614)
139 1ps9_A 2,4-dienoyl-COA reducta 38.8 1.8E+02 0.0063 27.4 10.3 27 85-111 136-162 (671)
140 1qpo_A Quinolinate acid phosph 38.8 77 0.0026 26.9 6.8 64 95-177 206-270 (284)
141 3o1n_A 3-dehydroquinate dehydr 37.3 1.8E+02 0.0063 24.4 14.3 73 160-236 123-199 (276)
142 1o4u_A Type II quinolic acid p 37.2 46 0.0016 28.4 5.1 64 95-177 205-269 (285)
143 1rqb_A Transcarboxylase 5S sub 37.1 2.3E+02 0.0078 26.4 10.3 76 91-177 176-253 (539)
144 3q94_A Fructose-bisphosphate a 37.0 1.9E+02 0.0067 24.5 11.3 123 92-223 34-171 (288)
145 3e96_A Dihydrodipicolinate syn 35.9 80 0.0027 27.1 6.6 78 90-176 33-113 (316)
146 3ble_A Citramalate synthase fr 35.7 1.3E+02 0.0044 26.0 8.0 117 91-226 170-293 (337)
147 3aty_A Tcoye, prostaglandin F2 35.7 2.2E+02 0.0076 25.0 9.6 27 85-111 168-196 (379)
148 2zbt_A Pyridoxal biosynthesis 35.4 1.2E+02 0.0043 25.3 7.7 72 94-176 32-107 (297)
149 2p10_A MLL9387 protein; putati 35.4 1.7E+02 0.0058 24.9 8.3 78 93-177 173-260 (286)
150 2d16_A Hypothetical protein PH 35.2 28 0.00096 26.8 3.0 26 196-221 126-152 (162)
151 2jvf_A De novo protein M7; tet 35.0 45 0.0015 22.2 3.6 23 88-110 31-53 (96)
152 1qop_A Tryptophan synthase alp 34.8 1.7E+02 0.006 24.1 8.5 22 93-114 34-55 (268)
153 1nvm_A HOA, 4-hydroxy-2-oxoval 34.8 2.2E+02 0.0076 24.5 18.2 147 92-256 32-188 (345)
154 4af0_A Inosine-5'-monophosphat 34.6 78 0.0027 29.7 6.5 69 158-237 282-354 (556)
155 2qjg_A Putative aldolase MJ040 34.4 1.9E+02 0.0065 23.6 10.9 64 163-234 173-236 (273)
156 3eb2_A Putative dihydrodipicol 34.3 61 0.0021 27.6 5.6 78 90-175 25-105 (300)
157 3rcm_A TATD family hydrolase; 34.1 1.1E+02 0.0039 25.7 7.2 83 147-241 128-213 (287)
158 1nfp_A LUXF gene product; flav 33.3 53 0.0018 26.3 4.8 45 210-257 171-216 (228)
159 3t7v_A Methylornithine synthas 32.8 2.3E+02 0.0079 24.1 10.2 71 159-233 152-235 (350)
160 1vgg_A Conserved hypothetical 32.7 27 0.00093 26.9 2.6 26 196-221 126-152 (161)
161 1qo2_A Molecule: N-((5-phospho 32.5 99 0.0034 25.0 6.4 117 96-236 36-165 (241)
162 2ekm_A Hypothetical protein ST 32.4 28 0.00094 26.9 2.6 26 196-221 127-153 (162)
163 1wvq_A Hypothetical protein PA 31.5 29 0.00099 26.9 2.6 27 196-222 131-158 (167)
164 2cw6_A Hydroxymethylglutaryl-C 31.2 2.4E+02 0.008 23.7 9.3 16 96-111 162-177 (298)
165 3ngf_A AP endonuclease, family 31.1 2.1E+02 0.0071 23.1 8.7 85 88-178 91-187 (269)
166 1k77_A EC1530, hypothetical pr 30.8 2E+02 0.0069 22.8 8.8 87 88-179 83-181 (260)
167 2i7g_A Monooxygenase, AGR_C_41 30.8 85 0.0029 27.4 6.1 55 209-265 307-362 (376)
168 3tr9_A Dihydropteroate synthas 30.4 2.6E+02 0.009 24.0 9.1 69 196-265 27-103 (314)
169 3hbl_A Pyruvate carboxylase; T 28.9 2.5E+02 0.0085 28.8 9.7 76 91-177 693-768 (1150)
170 1rlh_A Conserved hypothetical 26.6 30 0.001 26.9 1.9 24 196-219 138-162 (173)
171 1ep3_A Dihydroorotate dehydrog 26.5 1.4E+02 0.0047 25.0 6.5 78 92-175 113-195 (311)
172 1szn_A Alpha-galactosidase; (b 26.4 3.4E+02 0.012 24.1 9.6 87 83-178 29-134 (417)
173 3aam_A Endonuclease IV, endoiv 25.6 2.6E+02 0.0089 22.4 9.6 30 148-178 3-35 (270)
174 3ewb_X 2-isopropylmalate synth 25.5 3E+02 0.01 23.2 8.4 78 90-174 150-227 (293)
175 3eeg_A 2-isopropylmalate synth 25.3 1.3E+02 0.0045 25.9 6.2 74 90-174 151-228 (325)
176 3vnd_A TSA, tryptophan synthas 25.3 3E+02 0.01 22.9 13.9 80 92-175 34-129 (267)
177 2q02_A Putative cytoplasmic pr 25.2 2.6E+02 0.0089 22.3 11.1 31 147-177 7-40 (272)
178 1ydo_A HMG-COA lyase; TIM-barr 25.1 1.9E+02 0.0066 24.6 7.2 74 90-174 157-231 (307)
179 3hg3_A Alpha-galactosidase A; 25.1 3.7E+02 0.013 24.0 9.2 91 82-180 35-143 (404)
180 3bg3_A Pyruvate carboxylase, m 24.8 2.1E+02 0.0071 27.8 7.9 74 90-174 261-335 (718)
181 1gvf_A Tagatose-bisphosphate a 24.8 2.8E+02 0.0095 23.5 7.9 130 95-242 34-180 (286)
182 1vc4_A Indole-3-glycerol phosp 24.7 2.3E+02 0.008 23.3 7.4 18 162-179 121-138 (254)
183 2qf7_A Pyruvate carboxylase pr 24.6 3.3E+02 0.011 28.0 9.8 74 91-177 710-785 (1165)
184 3rmj_A 2-isopropylmalate synth 24.5 2.1E+02 0.0072 25.1 7.4 77 92-177 159-237 (370)
185 1fvp_A Flavoprotein 390, FP390 24.4 1.2E+02 0.0041 24.0 5.5 45 210-257 174-219 (231)
186 3iwp_A Copper homeostasis prot 23.7 3.4E+02 0.012 23.1 8.4 17 161-177 116-132 (287)
187 3nwr_A A rubisco-like protein; 23.4 4.1E+02 0.014 23.9 9.8 80 94-178 181-263 (432)
188 2qiw_A PEP phosphonomutase; st 23.2 3.1E+02 0.011 22.7 7.9 65 93-178 171-238 (255)
189 3ayv_A Putative uncharacterize 22.6 1.5E+02 0.0052 23.6 5.8 92 82-177 68-161 (254)
190 2vef_A Dihydropteroate synthas 22.2 3.4E+02 0.012 23.2 8.1 70 195-265 8-83 (314)
191 1s2w_A Phosphoenolpyruvate pho 22.1 2E+02 0.0069 24.4 6.6 67 93-178 173-240 (295)
192 3tdn_A FLR symmetric alpha-bet 22.1 3.1E+02 0.01 22.0 8.4 69 95-178 40-110 (247)
193 1aj0_A DHPS, dihydropteroate s 22.0 3E+02 0.01 23.2 7.6 66 196-265 14-88 (282)
194 2xn2_A Alpha-galactosidase; hy 21.8 3.6E+02 0.012 26.0 9.0 22 94-115 354-375 (732)
195 2ekc_A AQ_1548, tryptophan syn 21.6 3.4E+02 0.011 22.3 8.0 22 93-114 34-55 (262)
196 1qtw_A Endonuclease IV; DNA re 21.3 3.2E+02 0.011 21.9 11.1 89 85-179 84-182 (285)
197 3qc0_A Sugar isomerase; TIM ba 21.2 3.1E+02 0.011 21.7 8.5 30 148-177 6-39 (275)
198 2vc7_A Aryldialkylphosphatase; 21.2 3.5E+02 0.012 22.2 8.7 89 147-240 165-259 (314)
199 4fo4_A Inosine 5'-monophosphat 20.7 4.3E+02 0.015 23.1 8.6 67 93-175 110-176 (366)
200 1i60_A IOLI protein; beta barr 20.6 3.2E+02 0.011 21.7 11.3 29 148-176 2-34 (278)
No 1
>3rpd_A Methionine synthase (B12-independent); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, rossmann fold, Zn, TRA; HET: MSE; 1.50A {Shewanella SP}
Probab=100.00 E-value=1.1e-52 Score=381.49 Aligned_cols=253 Identities=25% Similarity=0.468 Sum_probs=230.4
Q ss_pred ChHHHhhcCCCceeecccceeecCCcc-ccCCEEEeeccCCCCCcHHHHHHHHhccCCCcccccchHHHHHhhhccCCCC
Q 024250 1 MVEYFGEQLSGFAFTANGWVQSYGSRC-VKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQ 79 (270)
Q Consensus 1 ~~~~f~~~~~G~~~~~~~~~~~~~~~~-~~~p~i~~~i~~~~~~~~~~~~~~~~~~~~~vK~~l~GP~Tla~~~~~~~~~ 79 (270)
|+.||+++|+||++..++|+++| +++ +++|+|+|++++++|+++++++++++.+++|+|++||||+|++.++.+.+|.
T Consensus 82 ~~~~f~~~l~G~~~~~~~~v~~~-~~~~~~~p~i~G~v~~~~~~~v~~~~~~~~~t~~~vK~~lpgP~t~~~~~~~~~y~ 160 (357)
T 3rpd_A 82 FVTTFIEHLNGVDFSKRKIVKIR-DRYDASVPTVVGPVSRQKSVFVEDAKFLRKQTTQPIKWALPGPMTMIDTLYDDHYK 160 (357)
T ss_dssp TTHHHHHTSEEEEEEEEEEEEET-TTEEEEEEEEEEEEECCSCSSHHHHHHHHHHCSSCBEEEEECHHHHHTSSEESSSC
T ss_pred HHHHHHHhCCCeeeccCcccccc-CCceeeCCEEEccCCCCCCCcHHHHHHHHhhccCCceEEeCCHHHHHHHhhhccCC
Confidence 88999999999999888999999 554 5789999999999999999999999999899999999999999999988899
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccC---
Q 024250 80 PRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYS--- 156 (270)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g--- 156 (270)
++++++.+|+.+|++++++|.++||++||||||+|.. .++.+.+++++++|.++++++ ..+.+|+|||
T Consensus 161 ~~~e~~~dlA~a~~~ei~~l~~aG~~~IQiDeP~l~~-------~~~~~~~~~v~~~n~~~~~~~--~~~~iHiC~G~~~ 231 (357)
T 3rpd_A 161 SREKLAWEFAKILNEEAKELEAAGVDIIQFDEPAFNV-------FFDEVNDWGIACLERAIEGLK--CETAVHICYGYGI 231 (357)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECGGGGT-------CHHHHHHTHHHHHHHHHTTCC--SEEEEEECSCCSS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCccccc-------cHHHHHHHHHHHHHHHHhCCC--CceEEEEecCCcc
Confidence 9999999999999999999999999999999999985 345678899999999999997 4568899986
Q ss_pred ---------------CchhHHHHHHhCCCCEEEEEccCC--CchhHHHhhhcccCCCeeeceEecCCCCCCCCHHHHHHH
Q 024250 157 ---------------NFNDIIHSIIDMDADVITIENSRS--DEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADR 219 (270)
Q Consensus 157 ---------------~~~~~~~~l~~~~vd~l~ld~~~~--~~~~l~~l~~~~~~~~~l~~GvVd~~~~~~e~~e~v~~~ 219 (270)
++.++++.|.++++|+|++|+.+. +.+.++.+ .++.|++||||++++++|++|+++++
T Consensus 232 ~~n~d~~~t~~~~~g~y~~i~~~l~~~~~D~i~lE~~~~r~~~e~l~~~-----~~k~v~lGvvd~~s~~ve~~eev~~r 306 (357)
T 3rpd_A 232 KANTDWKKTLGSEWRQYEEVFPKLQKSNIDIISLECHNSHVPMELLELI-----RGKKVMVGAIDVATDTIETAEEVADT 306 (357)
T ss_dssp HHHHHHHTTSCSCCCGGGGTHHHHHHSSCCEEEECCTTCCCCGGGGGGG-----TTSEEEEECSCTTCSSCCCHHHHHHH
T ss_pred CCccccccccccccCcHHHHHHHHHhCCCCEEEEEecCCCCChHHHHhc-----CCCEEEeccccCcCCCCCCHHHHHHH
Confidence 357899999999999999999764 24444433 36799999999999999999999999
Q ss_pred HHHHhccccCCceEecCCCCCCCCCHhHHHHHHHHHHHHHHHHHHHHhh
Q 024250 220 INKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLAS 268 (270)
Q Consensus 220 i~~~~~~~~~~~l~vsp~Cgl~~~~~~~a~~kL~~l~~~a~~~~~~~~~ 268 (270)
++++++++|.+++||+|+|||++++++.|++||++|+++|+.+|+++..
T Consensus 307 i~~a~~~v~~~~l~lsPdCGl~~~~~~~a~~kL~~mv~aa~~~r~~l~~ 355 (357)
T 3rpd_A 307 LRKALKFVDADKLYPCTNCGMTPLSHQVTRGKLNALSAGAEIVRKELLA 355 (357)
T ss_dssp HHHHHTTSCGGGEEEECSSCCTTSCHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhCCcccEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999864
No 2
>3ppg_A 5-methyltetrahydropteroyltriglutamate--homocystei methyltransferase; cobalamin-independent, surface entropy reduction; 1.98A {Candida albicans} PDB: 3ppf_A 3pph_A 3ppc_A
Probab=100.00 E-value=1.1e-52 Score=409.54 Aligned_cols=261 Identities=59% Similarity=1.006 Sum_probs=225.0
Q ss_pred ChHHHhhcCCCceeecccceeecCCccccCCEEEeeccCCCCCcHHHHHHHHhccCCCcccccchHHHHHhhhccCCCCc
Q 024250 1 MVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQP 80 (270)
Q Consensus 1 ~~~~f~~~~~G~~~~~~~~~~~~~~~~~~~p~i~~~i~~~~~~~~~~~~~~~~~~~~~vK~~l~GP~Tla~~~~~~~~~~ 80 (270)
|+.||+++|+||+++.+||+++||++++++|+|+|+|++++|+.+++++++++.+++|+|++|+||+|++.|+++.+|.+
T Consensus 527 ~v~~F~e~L~G~~~~~~g~vq~~g~r~~~~p~i~G~V~~~~p~~v~~~~~~qs~t~~pvK~~L~gP~ti~~~s~~r~~~~ 606 (789)
T 3ppg_A 527 MVQYFGEQLNGFAFTTNGWVQSYGSRYVRPPIIVGDVSRPKAMTVKESVYAQSITSKPMKGMLTGPVTILRWSFPRDDVS 606 (789)
T ss_dssp TTHHHHTTSEEEECCSSCCEEEETTEEECCCEEEEEEECCSCSSHHHHHHHHHTCSSCBEEEEECHHHHHHTSBCCSSSC
T ss_pred HHHHHHHhCCCeeEecCcceEecCCccccCCeeeccCCCCCCCcHHHHHHHHhhccCCCceeccchHhHhhhhccccCCC
Confidence 89999999999999888999999999999999999999999999999999999998999999999999999999888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCEEEeccCccccCCCCCC-ccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCch
Q 024250 81 RHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRK-SEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFN 159 (270)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~ 159 (270)
+++++.+|+.+|++++++|.++||++||||||++...++... .+++.+.+++++++|.++++++.++.|++|+|+||++
T Consensus 607 ~ee~~~dlA~A~r~Ei~~L~~AG~r~IQiDEPal~e~l~~r~g~d~~~~l~~av~a~n~a~~g~p~d~~I~tHiC~Gnf~ 686 (789)
T 3ppg_A 607 GKIQALQLGLALRDEVNDLEGAGITVIQVDEPAIREGLPLRAGKERSDYLNWAAQSFRVATSGVENSTQIHSHFCYSDLD 686 (789)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCEEEEECTTTGGGSCSSSSHHHHHHHHHHHHHHHHHHSSSCTTSEEEEECC---CC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccchhhcccccccCCHHHHHHHHHHHHHHHHhcCCCCcEEEEeccCCCCC
Confidence 999999999999999999999999999999999987776543 4678889999999999999998878899999999997
Q ss_pred hHHHHHHhCCCCEEEEEc-cCCCchhHHHhhhcccCCCeeeceEecCCCCCCCCHHHHHHHHHHHhccccCCceEecCCC
Q 024250 160 DIIHSIIDMDADVITIEN-SRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDC 238 (270)
Q Consensus 160 ~~~~~l~~~~vd~l~ld~-~~~~~~~l~~l~~~~~~~~~l~~GvVd~~~~~~e~~e~v~~~i~~~~~~~~~~~l~vsp~C 238 (270)
. +.+.++++|++++|| .+++.+.|+.+.+ .++.|++||||++++.+|++|+++++|+++++++|.+++||||+|
T Consensus 687 ~--~~I~~l~aD~islE~~~Rs~~e~L~~~~~---~~k~V~lGVvds~sp~vEs~EeV~~rI~~a~~~v~~erL~lsPdC 761 (789)
T 3ppg_A 687 P--NHIKALDADVVSIEFSKKDDPNYIQEFSE---YPNHIGLGLFDIHSPRIPSKQEFVSRIEEILKVYPASKFWVNPDC 761 (789)
T ss_dssp H--HHHHHHCCSEEEEC---------CGGGGG---CCSEEEEC-------CCCCHHHHHHHHHHHTTTSCGGGEEECCSC
T ss_pred h--hHHHhCCCCEEEEecCCCcchHHHHHHHh---cCCeEEeeeecCCCCCCCCHHHHHHHHHHHHHhcCcccEEEeCCC
Confidence 6 889999999999996 3334566777765 367999999999999999999999999999999999999999999
Q ss_pred CCCCCCHhHHHHHHHHHHHHHHHHHHHH
Q 024250 239 GLKTRKYTEVKPALSNMVAAAKLLRTQL 266 (270)
Q Consensus 239 gl~~~~~~~a~~kL~~l~~~a~~~~~~~ 266 (270)
||+++++++|++||++|+++|+.+|+++
T Consensus 762 Gl~t~~~~~a~akL~~mveaAk~lR~~~ 789 (789)
T 3ppg_A 762 GLKTRGWPEVKESLTNMVEAAKEFRAKY 789 (789)
T ss_dssp C---CCHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999875
No 3
>1u1j_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; methionine, synthase, methyltetrahydrofolate; HET: C2F; 2.40A {Arabidopsis thaliana} SCOP: c.1.22.2 c.1.22.2 PDB: 1u1h_A* 1u1u_A 1u22_A*
Probab=100.00 E-value=1.9e-51 Score=405.44 Aligned_cols=269 Identities=94% Similarity=1.456 Sum_probs=245.4
Q ss_pred ChHHHhhcCCCceeecccceeecCCccccCCEEEeeccCCCCCcHHHHHHHHhccCCCcccccchHHHHHhhhccCCCCc
Q 024250 1 MVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQP 80 (270)
Q Consensus 1 ~~~~f~~~~~G~~~~~~~~~~~~~~~~~~~p~i~~~i~~~~~~~~~~~~~~~~~~~~~vK~~l~GP~Tla~~~~~~~~~~ 80 (270)
|++||+++|+||+++.+||+++||++++++|+|+|+++++.|+++++++++++.+++|+|++++||+|++.++...++.+
T Consensus 496 ~~~~f~~~l~G~~~~~~g~~~~~~~~~~~~p~i~g~i~~~~p~~ve~~~~l~~~~~~pvK~~l~GP~Tl~~~~~~r~~~~ 575 (765)
T 1u1j_A 496 MVEYFGEQLSGFAFTANGWVQSYGSRCVKPPVIYGDVSRPKAMTVFWSAMAQSMTSRPMKGMLTGPVTILNWSFVRNDQP 575 (765)
T ss_dssp TTHHHHTTSTTEECCSSCCEEEETTEEECCCEECSCCCCCSCSSTHHHHHHTTSCSSCBEEEEECHHHHHHTSEECTTSC
T ss_pred HHHHHHHHhCCCccccCCcccccccccCcCCeeecCcCCCCCCHHHHHHHHHHHhcCCeEEEecCHHHHHHHHhccCcCc
Confidence 89999999999998778999999999999999999999999999999999999988899999999999999988777778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchh
Q 024250 81 RHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFND 160 (270)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~ 160 (270)
+++++++++.++++++++|.++||++||||||++...++....+++.+.+++++++|.++++++.++.+++|+|+|++++
T Consensus 576 ~~~l~~~lA~a~~~ev~~L~~aG~~~IQiDEP~l~~~l~~~~~~~~~~~~~av~~~~~~~~~v~~~~~i~~HiC~G~~~~ 655 (765)
T 1u1j_A 576 RHETCYQIALAIKDEVEDLEKGGIGVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDSTQIHTHMCYSHFND 655 (765)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCEEEEECTTSSTTCCSSGGGHHHHHHHHHHHHHHHHTTSCSSSEEEEECSCSCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCcccccccccCCCHHHHHHHHHHHHHHHHhcCCCCCeEEEEeccCCcHH
Confidence 99999999999999999999999999999999999887666567788999999999999999987778999999999999
Q ss_pred HHHHHHhCCCCEEEEEccCCCchhHHHhhh-cccCCCeeeceEecCCCCCCCCHHHHHHHHHHHhccccCCceEecCCCC
Q 024250 161 IIHSIIDMDADVITIENSRSDEKLLSVFRE-GVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCG 239 (270)
Q Consensus 161 ~~~~l~~~~vd~l~ld~~~~~~~~l~~l~~-~~~~~~~l~~GvVd~~~~~~e~~e~v~~~i~~~~~~~~~~~l~vsp~Cg 239 (270)
+++.|.++++|+|++|..+++.+.|+.+.+ + ..++.+++||||++++.+|++|+|+++|+++++++|.++++|+|+||
T Consensus 656 i~~~l~~~~~D~islE~~rs~~e~L~~~~~~~-~~~~~v~lGvvd~~s~~ve~~eev~~ri~~a~~~v~~e~l~lsPdCG 734 (765)
T 1u1j_A 656 IIHSIIDMDADVITIENSRSDEKLLSVFREGV-KYGAGIGPGVYDIHSPRIPSSEEIADRVNKMLAVLEQNILWVNPDCG 734 (765)
T ss_dssp THHHHHTTCCSEEECCBSSSCTTGGGGGTTTT-CCCSEECCBSSCTTSSSCCTHHHHHHHHHHHHHSSCSTTBCBBCSSC
T ss_pred HHHHHHhCCCCEEEEeCCCCCHHHHHHHHhhc-cCCCeEEEeecCCccCCCCCHHHHHHHHHHHHHhcCcccEEEeCCCC
Confidence 999999999999999976656777777764 2 23679999999999999999999999999999999999999999999
Q ss_pred CCCCCHhHHHHHHHHHHHHHHHHHHHHhhcC
Q 024250 240 LKTRKYTEVKPALSNMVAAAKLLRTQLASAK 270 (270)
Q Consensus 240 l~~~~~~~a~~kL~~l~~~a~~~~~~~~~~~ 270 (270)
|++++++.+++||++|+++|+.+|+++..+|
T Consensus 735 l~t~t~~e~~~kL~~mveaA~~vr~~~~~~~ 765 (765)
T 1u1j_A 735 LKTRKYTEVKPALKNMVDAAKLIRSQLASAK 765 (765)
T ss_dssp SSSSCHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 9999999999999999999999999987765
No 4
>2nq5_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; structural genomics, target 6426D, PSI; 1.90A {Streptococcus mutans} PDB: 3l7s_A 3l7r_A 3t0c_A
Probab=100.00 E-value=5.2e-51 Score=401.23 Aligned_cols=267 Identities=58% Similarity=0.945 Sum_probs=232.6
Q ss_pred ChHHHhhcCCCceeecccceeecCCccccCCEEEeeccCCCCCcHHHHHHHHhccCCCcccccchHHHHHhhhccCCCCc
Q 024250 1 MVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQP 80 (270)
Q Consensus 1 ~~~~f~~~~~G~~~~~~~~~~~~~~~~~~~p~i~~~i~~~~~~~~~~~~~~~~~~~~~vK~~l~GP~Tla~~~~~~~~~~ 80 (270)
|++||+++|+||+++.+||+++||++++++|+|+|+++++.|+++++++++++.+++|+|++++||+|++.++...++.+
T Consensus 481 ~v~~F~~~l~G~~~~~~g~~~~~~~~~~~~p~i~G~i~~~~p~~ve~~~~l~~~t~~pvK~~l~GP~Tl~~~~~~r~~~~ 560 (755)
T 2nq5_A 481 MVEFFGQKLAGFTTTKFGWVQSYGSRAVKPPIIYGDVQHLEPITVEETVYAQSLTDRPVKGMLTGPITITNWSFERTDIP 560 (755)
T ss_dssp TTHHHHTTEEEEECCSSCCEEEETTEEECCCEEEEEEEECSCSSHHHHHHHHHTCSSCBEEEEECHHHHHHHSBCCSSSC
T ss_pred HHHHHHHhCCCcccccCCccccccccCCCCCEecCCccCCCCCHHHHHHHHHHhcCCCeEEEecCHHHHHHHHhccCccc
Confidence 89999999999998778999999999999999999999999999999999999998899999999999999988777778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchh
Q 024250 81 RHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFND 160 (270)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~ 160 (270)
+++++++++.++++++++|.++||++||||||++...++....+++.+.+++++++|.++++++.++.+++|+|+|++++
T Consensus 561 ~~el~~~lA~a~~~ei~~L~~aG~~~IQiDEP~l~~~l~~~~~~~~~~~~~av~~l~~~~~~v~~~~~i~~HiC~G~~~~ 640 (755)
T 2nq5_A 561 RDQLFNQIGLAIKDEIKLLENAGIAIIQVDEAALREGLPLRKSKQKAYLDDAVHAFHIATSSVKDETQIHTHMCYSKFDE 640 (755)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCHHHHSCSSHHHHHHHHHHHHHHHHHHHSSSCTTSEEEEEECCSCCST
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCCcccccccccCCCHHHHHHHHHHHHHHHHhcCCCCCeEEEEeccCCcHH
Confidence 99999999999999999999999999999999999877655456778899999999999999987788999999999999
Q ss_pred HHHHHHhCCCCEEEEEccCCCchhHHHhhhcccCCCeeeceEecCCCCCCCCHHHHHHHHHHHhccccCCceEecCCCCC
Q 024250 161 IIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGL 240 (270)
Q Consensus 161 ~~~~l~~~~vd~l~ld~~~~~~~~l~~l~~~~~~~~~l~~GvVd~~~~~~e~~e~v~~~i~~~~~~~~~~~l~vsp~Cgl 240 (270)
+++.|.++++|+|++|..+++.+.|+.+.+. ..++.+++||||++++.+|++|+|+++|+++++++|.++++|+|+|||
T Consensus 641 i~~~L~~~~aD~islE~~rsd~e~L~~~~~~-~~~~~v~lGvvd~~s~~ve~~eeV~~ri~~a~~~v~~e~l~lsPdCGl 719 (755)
T 2nq5_A 641 IIDAIRALDADVISIETSRSHGDIIESFETA-VYPLGIGLGVYDIHSPRVPTKEEVVANIERPLRQLSPTQFWVNPDCGL 719 (755)
T ss_dssp THHHHHHHCCSEEEC--------------------CEEEEECSCTTSSCCCCHHHHHHHHHGGGGSSCGGGEEEECSSCC
T ss_pred HHHHHHhCCCCEEEEecCCCCHHHHHHHHhc-cCCCeEEEeeccCccCCCCCHHHHHHHHHHHHHhCCcccEEEeCCCCC
Confidence 9999999999999999765556666666542 126789999999999999999999999999999999999999999999
Q ss_pred CCCCHhHHHHHHHHHHHHHHHHHHHHhh
Q 024250 241 KTRKYTEVKPALSNMVAAAKLLRTQLAS 268 (270)
Q Consensus 241 ~~~~~~~a~~kL~~l~~~a~~~~~~~~~ 268 (270)
++++++.+++||++|+++|+.+|++++.
T Consensus 720 ~t~t~~e~~~kL~~mveaA~~vr~~~~~ 747 (755)
T 2nq5_A 720 KTRQEPETIAALKVLVAATKEVRQKLGN 747 (755)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHC---
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999999998853
No 5
>1ypx_A Putative vitamin-B12 independent methionine synth protein; alpha-beta protein; 2.60A {Listeria monocytogenes}
Probab=100.00 E-value=2.7e-51 Score=375.59 Aligned_cols=266 Identities=14% Similarity=0.144 Sum_probs=212.7
Q ss_pred ChHHHhhcCCCce-eecccceeecCCc-cccCCEEEeeccCC-CCCcHHHHHHHHhccCC-C-cccccchHHHHHhhhcc
Q 024250 1 MVEYFGEQLSGFA-FTANGWVQSYGSR-CVKPPIIYGDVSRP-KAMTVFWSSLAQSMTAR-P-MKGMLTGPVTILNWSFV 75 (270)
Q Consensus 1 ~~~~f~~~~~G~~-~~~~~~~~~~~~~-~~~~p~i~~~i~~~-~~~~~~~~~~~~~~~~~-~-vK~~l~GP~Tla~~~~~ 75 (270)
|+.||+++|+||+ +..++|++|++.. .+++|+|+|+++++ +| ++++++++++.++. | +|++++||+|++.++..
T Consensus 71 ~~~~f~~~l~G~~~~~~~~~~~f~~~~~~~~~p~i~g~i~~~~~p-~~~~~~~l~~~~~~~~~vK~~l~gP~tl~~~~~~ 149 (375)
T 1ypx_A 71 WHFDFLENLDGVEGYDAAGGIQFSKVQTKSHSVKITGPIDFTTHP-FIEDFIFLKEAVGDNHVAKQTIPSPAMLHYRGDI 149 (375)
T ss_dssp CCHHHHTTSEEEEEC----------------CEEEEEEEECSCCT-HHHHHHHHHHHHCSSSEECEEEECTHHHHHHEEE
T ss_pred HHHHHHHHCCCeeeecCCCceeecCCCCCccCceecCCCCCCCCc-hHHHHHHHHHHhcCCCceEEecCCHHHHHHHHhc
Confidence 7899999999999 6667899977655 37899999999998 67 99999999998876 7 69999999999988764
Q ss_pred C--CCCcH-HHHHHHHHHHHHHHHHHHHHcCCCEEEeccCccccCCC--------CCCccHHHHHHHHHHHHHHHhcCCC
Q 024250 76 R--NDQPR-HETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLP--------LRKSEHAFYLDWAVHSFRITNCGVQ 144 (270)
Q Consensus 76 ~--~~~~~-~~l~~~l~~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~--------~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (270)
. .|+++ ++++.+|+.+|++++++|.++||++||||||+|+..++ ....+++.+.+++++++|.++++++
T Consensus 150 ~~~~Y~~~~~~l~~~la~a~~~ei~~l~~aG~~~IQiDeP~l~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~n~~~~~~~ 229 (375)
T 1ypx_A 150 EYQPYLDDAEKFANDLATAYQKAIQAFYDAGCRYLQLDDTSWSYLCSDEQREVVRQRGFDPETLQETYKNLINEAIKHKP 229 (375)
T ss_dssp CSHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECHHHHTTSCC--------CCSTTTHHHHHHHHHHHHTTTCC
T ss_pred chhhccChHHHHHHHHHHHHHHHHHHHHHCCCCEEEecCCchhhhhccchhcccccccCCHHHHHHHHHHHHHHHHhcCC
Confidence 3 35677 99999999999999999999999999999999997662 2223556788999999999999997
Q ss_pred CCceEEEeeccC----------CchhHHHHHH-hCCCCEEEEEccCCCchhHHHhhhcccCCCeeeceEecCCCCCCCCH
Q 024250 145 DTTQIHTHMCYS----------NFNDIIHSII-DMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPST 213 (270)
Q Consensus 145 ~~~~i~lH~c~g----------~~~~~~~~l~-~~~vd~l~ld~~~~~~~~l~~l~~~~~~~~~l~~GvVd~~~~~~e~~ 213 (270)
.++++++|+|+| ++.++++.|. ++++|+|++|+.......++.++.....++.|++||||++++++|++
T Consensus 230 ~~~~i~~HiC~gn~~s~~~~~g~~~~i~~~l~~~~~~d~i~lE~~~~r~g~~e~L~~~~~~~~~v~lGvvd~~~~~~e~~ 309 (375)
T 1ypx_A 230 ADMVITMHICRGNFRSTWIAEGGYGPVAETLFGKLNIDGFFLEYDNERSGDFAPLKYVTRPDLKIVLGLITSKTGELEDE 309 (375)
T ss_dssp TTCEEEEEECCC----------CCSGGGHHHHTTCCCSEEEEECCSCC---CCTTCCCCCTTCEEEEEEECSSSCC-CCS
T ss_pred CCCeEEEEEeccccCCccccccchHHHHHHHHhhCCCCEEEEEecCCCCCcHHHHHHhhhcCCeEEEeeecCcCCCCCCH
Confidence 668899999998 5568899999 99999999998652211233343321126799999999999999999
Q ss_pred HHHHHHHHHHhccccCCceEecCCCCCC------CCCHhHHHHHHHHHHHHHHHHHHHHh
Q 024250 214 EEIADRINKMLAVLETNILWVNPDCGLK------TRKYTEVKPALSNMVAAAKLLRTQLA 267 (270)
Q Consensus 214 e~v~~~i~~~~~~~~~~~l~vsp~Cgl~------~~~~~~a~~kL~~l~~~a~~~~~~~~ 267 (270)
|+|+++|+++++++|.++++|+|+|||+ .+++++|++||++|+++|+.+|+++.
T Consensus 310 e~v~~ri~~a~~~v~~e~l~lsPdCGl~s~~~g~~~t~~~a~~kL~~~v~~A~~~~~~~~ 369 (375)
T 1ypx_A 310 AAIKARIEEASEIVPLSQLRLSPQCGFASTEEGNILTEEEQWDKLRYVVRLANDIWGELE 369 (375)
T ss_dssp HHHHHHHHHHHHHSCGGGEEEEESSCCC--------CHHHHHHHHHHHHHHHHHHSCC--
T ss_pred HHHHHHHHHHHHhcCccceEecCCCCccccccCCCCCHHHHHHHHHHHHHHHHHHHhchh
Confidence 9999999999999999999999999999 89999999999999999999998763
No 6
>1t7l_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; TIM barrel, methyltetrahydrofolate, zinc; 2.00A {Thermotoga maritima} PDB: 3bq5_A 3bq6_A 1xdj_A 1xr2_A* 1xpg_A*
Probab=100.00 E-value=9.6e-49 Score=380.35 Aligned_cols=266 Identities=53% Similarity=0.948 Sum_probs=241.1
Q ss_pred ChHHHhhcCCCceeecccceeecCCccccCCEEEeeccCCCCCcHHHHHHHHhccCCCcccccchHHHHHhhhccCCCCc
Q 024250 1 MVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQP 80 (270)
Q Consensus 1 ~~~~f~~~~~G~~~~~~~~~~~~~~~~~~~p~i~~~i~~~~~~~~~~~~~~~~~~~~~vK~~l~GP~Tla~~~~~~~~~~ 80 (270)
|+.||++.++||.+..+||.+++|++++++|.++|++.++.|+.+++++++++.+..|+|++|+||+|++.+++..++.+
T Consensus 500 ~Vldf~~~L~Gi~~~~~g~~~~~~~~~~~~pi~~G~i~ra~pMtlde~~~Aksl~~~pvK~~LtGPvTlL~ls~~r~d~~ 579 (766)
T 1t7l_A 500 MVEFFAEKLNGIATTQNGWVLSYGSRCYRPPIIYGTVTRPEPMTLKEITYAQSLTEKPVKGMLTGPVTIMSWSYYREDIP 579 (766)
T ss_dssp HHHHHHTTSEEEECCSSCCEEEETTEEECCCEEEEEEECCSCSSHHHHHHHHHTCSSCBEEEEECHHHHHHTSEECSSSC
T ss_pred HHHHHHHHhCCccccccccccccccccccCceeecCCccCCcChHHHHHHHHHhcCCCeEEEEeCHHHHHHHhhccCCCC
Confidence 78999999999987667888899988888999999998889999999999999877889999999999999888666668
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchh
Q 024250 81 RHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFND 160 (270)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~ 160 (270)
+++++++|+.+|++++++|.++||++||||||+|+.+++....+++.+.+++++++|.+ ++++.++.+++|+|||++++
T Consensus 580 r~ell~dLA~ayreeI~~L~~AGa~~IQIDEPaL~~~L~~~~~d~~~~l~~a~~aln~a-~gv~~~~~I~lH~C~G~~~d 658 (766)
T 1t7l_A 580 EREIAYQIALAINEEVKDLEEAGIKIVQIDEPAFREKAPIKKSKWPEYFEWAINAFNLA-ANARPETQIHAHMCYSDFNE 658 (766)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCEEEEECTHHHHTSCSSGGGHHHHHHHHHHHHHHH-TCCCTTSEEEEECCCSCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCCcccccCCCcchhHHHHHHHHHHHHHHh-hcCCCCceEEEEEecCchHH
Confidence 89999999999999999999999999999999999888665556778899999999999 88876678999999999999
Q ss_pred HHHHHHhCCCCEEEEEccCCCchhHHHhhhcccCCCeeeceEecCCCCCCCCHHHHHHHHHHHhccccCCceEecCCCCC
Q 024250 161 IIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGL 240 (270)
Q Consensus 161 ~~~~l~~~~vd~l~ld~~~~~~~~l~~l~~~~~~~~~l~~GvVd~~~~~~e~~e~v~~~i~~~~~~~~~~~l~vsp~Cgl 240 (270)
+++.|.++++|+|++|..+++.+.++.+.+....++.+++||||++|+|++++++++++|+++++++|.++++|+|||||
T Consensus 659 i~~~L~~l~VD~IsLE~~Rs~~elL~~l~~~p~~~k~L~lGVVD~rn~~ved~EeI~~rI~~a~~~Vg~erL~VsPdCGL 738 (766)
T 1t7l_A 659 IIEYIHQLEFDVISIEASRSKGEIISAFENFKGWIKQIGVGVWDIHSPAVPSINEMREIVERVLRVLPKELIWINPDCGL 738 (766)
T ss_dssp THHHHTTSCCSEEEEECTTTTTGGGHHHHTSTTCCSEEEEECSCTTSCSCCCHHHHHHHHHHHTTTSCGGGEEEECSSCC
T ss_pred HHHHHHcCCCCEEEEecCCCchhHHHHHHhccccCCeEEEEEECCCCCCCCCHHHHHHHHHHHHHhcCcccEEEeCCCCC
Confidence 99999999999999998876666667666421125799999999999999999999999999999999999999999999
Q ss_pred CCCCHhHHHHHHHHHHHHHHHHHHHHh
Q 024250 241 KTRKYTEVKPALSNMVAAAKLLRTQLA 267 (270)
Q Consensus 241 ~~~~~~~a~~kL~~l~~~a~~~~~~~~ 267 (270)
.+++++.+++||++|+++|+.+|+++.
T Consensus 739 ~~~p~~e~~~kLk~mvaaAkevr~e~~ 765 (766)
T 1t7l_A 739 KTRNWDEVIPSLRNMVALAKEMREKFE 765 (766)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999874
No 7
>1u1j_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; methionine, synthase, methyltetrahydrofolate; HET: C2F; 2.40A {Arabidopsis thaliana} SCOP: c.1.22.2 c.1.22.2 PDB: 1u1h_A* 1u1u_A 1u22_A*
Probab=100.00 E-value=4.2e-41 Score=331.84 Aligned_cols=252 Identities=17% Similarity=0.157 Sum_probs=208.2
Q ss_pred HHHhhcCCCc-eeecccceeecCCccc-cCCEEEeeccCC--CCCcHHHHHHHHhccCCCcccccchHHHHHhhhcc--C
Q 024250 3 EYFGEQLSGF-AFTANGWVQSYGSRCV-KPPIIYGDVSRP--KAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFV--R 76 (270)
Q Consensus 3 ~~f~~~~~G~-~~~~~~~~~~~~~~~~-~~p~i~~~i~~~--~~~~~~~~~~~~~~~~~~vK~~l~GP~Tla~~~~~--~ 76 (270)
.||++..+ - ++.+.+|.|||++||| .+|+++++++++ .+.++++++++++. +.++|++|+||+||+.+.+. .
T Consensus 93 ~yf~~arG-~~~~~a~emtkwfdtNyhy~vPe~~~~~~~~~~~~~~l~~~~~ak~~-g~~~K~~l~GP~Tll~l~k~~~~ 170 (765)
T 1u1j_A 93 VYFSMARG-NASVPAMEMTKWFDTNYHYIVPELGPEVNFSYASHKAVNEYKEAKAL-GVDTVPVLVGPVSYLLLSKAAKG 170 (765)
T ss_dssp HHHHHHHC-CSSSCCCCEEECTTSSCEEECCEECTTCCCCCCCCHHHHHHHHHHHT-TCCCEEEEECHHHHHHTCEECTT
T ss_pred HHHHHhCC-CccccchhhheecccCcCceeeEEcCCcccccCCcchHHHHHHHHhc-CCCceEEECCHHHHHHhhhcccc
Confidence 46654443 2 2345688999999976 899999999876 46689999999988 78899999999999976652 2
Q ss_pred CCC--cHHHHHHHHHHHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeec
Q 024250 77 NDQ--PRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMC 154 (270)
Q Consensus 77 ~~~--~~~~l~~~l~~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c 154 (270)
.|+ +..+++++|+++|++++++|.++||+|||||||+|+.+++. ...+...++++.+.+.++ +.+++||+|
T Consensus 171 ~~~~~~~~~ll~~L~~~y~~~l~~L~~aG~~~VQiDEP~L~~~l~~------~~~~~~~~a~~~l~~~~~-~~~i~lhtc 243 (765)
T 1u1j_A 171 VDKSFELLSLLPKILPIYKEVITELKAAGATWIQLDEPVLVMDLEG------QKLQAFTGAYAELESTLS-GLNVLVETY 243 (765)
T ss_dssp CCTTCCGGGGHHHHHHHHHHHHHHHHHTTCCEEEEECGGGGSCCCH------HHHHHHHHHHHHSTTTTC-SSEEEEECC
T ss_pred cCccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCCccccCCCH------HHHHHHHHHHHHHHhhcC-CCeEEEEeC
Confidence 342 67899999999999999999999999999999999976621 123444444444433223 467899999
Q ss_pred cCCch-hHHHHHHhCC-CCEEEEEccCCCchhHHHhhhcccCCCeeeceEecCCCCCCCCHHHHHHHHHHHhccccCCce
Q 024250 155 YSNFN-DIIHSIIDMD-ADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNIL 232 (270)
Q Consensus 155 ~g~~~-~~~~~l~~~~-vd~l~ld~~~~~~~~l~~l~~~~~~~~~l~~GvVd~~~~~~e~~e~v~~~i~~~~~~~~~~~l 232 (270)
||++. ++++.|.+++ +|+||+|+.+.. +.++.+.+.++.++.|++|+||++|+|+++++++.++++++++.+|.+++
T Consensus 244 ~G~~~~~~~~~l~~l~~vd~l~lD~v~~~-~~l~~l~~~l~~~k~L~lGvVdgrni~~~d~e~v~~~l~~~~~~lg~~~l 322 (765)
T 1u1j_A 244 FADIPAEAYKTLTSLKGVTAFGFDLVRGT-KTLDLVKAGFPEGKYLFAGVVDGRNIWANDFAASLSTLQALEGIVGKDKL 322 (765)
T ss_dssp SSCCCHHHHHHHTTCTTCCEEEEESSSCT-THHHHHHHCCCSSCEEEEEEECSSSCBCCCHHHHHHHHHHHHHHCCSSCE
T ss_pred CCCcchHHHHHHHcCCCCcEEEEEecCCc-ccHHHHHHhcCCCCEEEEEeeCCcccCCCCHHHHHHHHHHHHHhcCCCcE
Confidence 99998 8999999999 999999998754 56777777445688999999999999999999999999999999888999
Q ss_pred EecCCCCCC----------CCCHhHH------HHHHHHHHHHHHHHHH
Q 024250 233 WVNPDCGLK----------TRKYTEV------KPALSNMVAAAKLLRT 264 (270)
Q Consensus 233 ~vsp~Cgl~----------~~~~~~a------~~kL~~l~~~a~~~~~ 264 (270)
+|+|||||. .++++.+ ++||++++++|+.+++
T Consensus 323 ~lspsCgL~hvP~~~~~e~~l~~~~~~~~~fa~~Kl~el~~la~~l~~ 370 (765)
T 1u1j_A 323 VVSTSCSLLHTAVDLINETKLDDEIKSWMAFAAQKVVEVNALAKALAG 370 (765)
T ss_dssp EEEESSCGGGSCSCGGGCCSSCHHHHTTBCCHHHHHHHHHHHHHHHHT
T ss_pred EEcCCCCccCCccccccccCCCHHHHhhhHHHHHHHHHHHHHHHHHhc
Confidence 999999999 6778777 9999999999998874
No 8
>3ppg_A 5-methyltetrahydropteroyltriglutamate--homocystei methyltransferase; cobalamin-independent, surface entropy reduction; 1.98A {Candida albicans} PDB: 3ppf_A 3pph_A 3ppc_A
Probab=100.00 E-value=3e-39 Score=315.17 Aligned_cols=251 Identities=16% Similarity=0.132 Sum_probs=210.2
Q ss_pred HHHhhcCCC----------ceeecccceeecCCccc-cCCEEEeeccCC-----CCCcHHHHHHHHhccCCCcccccchH
Q 024250 3 EYFGEQLSG----------FAFTANGWVQSYGSRCV-KPPIIYGDVSRP-----KAMTVFWSSLAQSMTARPMKGMLTGP 66 (270)
Q Consensus 3 ~~f~~~~~G----------~~~~~~~~~~~~~~~~~-~~p~i~~~i~~~-----~~~~~~~~~~~~~~~~~~vK~~l~GP 66 (270)
.||+++++. .++.+.+|.|||++||| .+|++.++..++ ....+++++++++. +..+|++|+||
T Consensus 115 ~yf~~arg~~~~~~~~~~~~~~~a~eMtKWFdTNYHYiVPE~~~~~~f~l~~~~~~k~~~e~~eAk~~-G~~~kpVl~GP 193 (789)
T 3ppg_A 115 VLFAMGRGLQAAATATQAAVDVTALEMVKWFDSNYHYVRPTFSHSTEFKLNTAAGIKPVDEFNEAKAL-GVQTRPVILGP 193 (789)
T ss_dssp HHHHHHHCEEECC-----CEEECCCCEEECTTSSCEEECCEECTTCCCCCCGGGCCHHHHHHHHHHHT-TCCCEEEEECH
T ss_pred HHHHHhcCCccccccccccCCcccccccccccCCCCeeceEECCCCCeeeccccchhHHHHHHHHHHc-CCCCCceeecH
Confidence 488888763 35667899999999975 899998766644 34688999999876 67899999999
Q ss_pred HHHHhhhc-cCC--CCcHHHHHHHHHHHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCC
Q 024250 67 VTILNWSF-VRN--DQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGV 143 (270)
Q Consensus 67 ~Tla~~~~-~~~--~~~~~~l~~~l~~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (270)
+||+.+++ ... +.++.+++++|+++|.+.+++|.++|+.|||||||+|+.+++. ...+.+.++|+.+.+.
T Consensus 194 vT~L~L~k~~~~~~~~~~~~lL~~Ll~~Y~~~l~~L~~~G~~wVQiDEP~Lv~dl~~------~~~~~~~~aY~~L~~~- 266 (789)
T 3ppg_A 194 VSYLYLGKADKDSLDLEPISLLPKILPVYKELLQKLKEAGAEQVQIDEPVLVLDLPE------AVQSKFKEAYDALVGA- 266 (789)
T ss_dssp HHHHHTCEECGGGTTCCGGGGHHHHHHHHHHHHHHHHHHTCCEEEEECGGGGSCCCH------HHHTHHHHHHHHHCST-
T ss_pred HHHHHHhccccccccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEeeCCeeecCCCH------HHHHHHHHHHHHHhhC-
Confidence 99999988 432 3466788999999999999999999999999999999976532 2355667777776552
Q ss_pred CCCceEEEeeccCCchhHHHHHHhCCCCEEEEEccCCCchhHHHhhhcccCCCeeeceEecCCCCCCCCHHHHHHHHHHH
Q 024250 144 QDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKM 223 (270)
Q Consensus 144 ~~~~~i~lH~c~g~~~~~~~~l~~~~vd~l~ld~~~~~~~~l~~l~~~~~~~~~l~~GvVd~~~~~~e~~e~v~~~i~~~ 223 (270)
. ..++.|++|||+..+.++.+.++||++|++|++++ .++++.+.+..+.+|.|++||||+||+|+++.+++.++++++
T Consensus 267 ~-~~kill~TYFg~~~~~l~~l~~lpV~gl~lDlv~~-~~~l~~v~~~~~~~k~L~aGvVdGRNiWr~dl~~~l~~l~~l 344 (789)
T 3ppg_A 267 D-VPELILTTYFGDVRPNLKAIENLPVAGFHFDFVRV-PEQLDEVASILKDGQTLSAGVVDGRNIWKTDFAKASAVVQKA 344 (789)
T ss_dssp T-SCEEEEECCSSCCGGGHHHHTTCCCSEEEEETTTC-GGGHHHHHHTCCTTCEEEEEEECSSCCBCCCHHHHHHHHHHH
T ss_pred C-CCCEEEECCCCCHHHHHHHHHcCCCcEEEEEccCC-cchHHHHHhhcCCCCeEEEEEecCCccccCCHHHHHHHHHHH
Confidence 2 35789999999999999999999999999999884 456777766446789999999999999999999999999999
Q ss_pred hccccCCceEecCCCCCCCCCH----------------hHHHHHHHHHHHHHHHHH
Q 024250 224 LAVLETNILWVNPDCGLKTRKY----------------TEVKPALSNMVAAAKLLR 263 (270)
Q Consensus 224 ~~~~~~~~l~vsp~Cgl~~~~~----------------~~a~~kL~~l~~~a~~~~ 263 (270)
.+.++.++++|+|||||.|.|. ++|.+||.+++.+++.+.
T Consensus 345 ~~~lg~~~l~vspScSLlHvP~~l~~e~~l~~~~~~~lafa~~k~~e~~~l~~~~~ 400 (789)
T 3ppg_A 345 IEKVGKDKVVVATSSSLLHTPVDLESETKLDAVIKDWFSFATQKLDEVVVIAKNVS 400 (789)
T ss_dssp HHHHCGGGEEEEESSCGGGSCSCGGGCSSSCHHHHTTBCCHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCeEEEeCCCCCCCCCcccccccCCCHHHHhhcchHHHHHHHHHHHHHHHc
Confidence 9888889999999999999532 589999999999998764
No 9
>2nq5_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; structural genomics, target 6426D, PSI; 1.90A {Streptococcus mutans} PDB: 3l7s_A 3l7r_A 3t0c_A
Probab=100.00 E-value=8.9e-39 Score=314.43 Aligned_cols=249 Identities=16% Similarity=0.131 Sum_probs=204.4
Q ss_pred hHHHhhcCC-CceeecccceeecCCcc-ccCCEEEe-eccCCCCCcHHHHHHHHhccCCCcccccchHHHHHhhhccCCC
Q 024250 2 VEYFGEQLS-GFAFTANGWVQSYGSRC-VKPPIIYG-DVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRND 78 (270)
Q Consensus 2 ~~~f~~~~~-G~~~~~~~~~~~~~~~~-~~~p~i~~-~i~~~~~~~~~~~~~~~~~~~~~vK~~l~GP~Tla~~~~~~~~ 78 (270)
-.||+++++ |-++ ..+|.|||++|| |++|++.+ ++++..+.++++++++++..+.++|++|+||+||+.+++. ..
T Consensus 93 ~~yFa~aRG~~~~~-a~emtkwfdtNyhY~vPe~~~~~~~~~~~~~l~~~~eA~~~~g~~vK~vl~GP~Tla~l~k~-~~ 170 (755)
T 2nq5_A 93 DLYFAIARGNKENV-ASSMKKWFNTNYHYIVPEWSKQRPKLNNNRLLDLYLEAREVVGDKAKPVITGPITYVALSTG-VE 170 (755)
T ss_dssp HHHHHHHHCCSSSC-CCCEEECTTSSCEEECCBCCSCCCCCCCCHHHHHHHHHHHHHGGGEEEEEECHHHHHHTCBS-CS
T ss_pred HHHHHHHhCCCCCC-cccceeeccCCCceeeeeeeCceeeecCchHHHHHHHHHHhcCCCcEEEEccHHHHHHHhcC-Cc
Confidence 468987655 2233 579999999996 58999997 6677778899999999844578999999999999998875 22
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCc
Q 024250 79 QPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNF 158 (270)
Q Consensus 79 ~~~~~l~~~l~~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~ 158 (270)
+.++++.+|+++|++++++|.++|++|||||||+|+.+++. + +.+.+.++++.+.+.+. +.+++||+|||++
T Consensus 171 -~~~dll~~L~~~y~~~l~~L~~~Ga~~VQiDEP~L~~dl~~---~---~~~~~~~ay~~l~~~~~-~~~v~lhtyfG~~ 242 (755)
T 2nq5_A 171 -DFTAAVKSLLPLYKQVFTELVKAGASYIQVDEPIFVTDEGK---D---YLQAAKAVYAYFAKEVP-DAKFIFQTYFEGL 242 (755)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECGGGGSSGGG---G---GHHHHHHHHHHHHHHST-TCEEEEECCSSCC
T ss_pred -HHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcccCCCCH---H---HHHHHHHHHHHHHhccc-CCcEEEEEeCCCh
Confidence 46799999999999999999999999999999999986631 2 34555556666543221 2468899999998
Q ss_pred hhHHHHHHhCCCCEEEEEccCCCchhHHHhhhcccCCCeeeceEecCCCCCCCCHHHHHHHHHHHhccccCCceEecCCC
Q 024250 159 NDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDC 238 (270)
Q Consensus 159 ~~~~~~l~~~~vd~l~ld~~~~~~~~l~~l~~~~~~~~~l~~GvVd~~~~~~e~~e~v~~~i~~~~~~~~~~~l~vsp~C 238 (270)
. +++.|.++|+|+||+|+.+...+.++.+.+..+.++.|++||||++|+|.++++++.++++++++. .++++|+|||
T Consensus 243 ~-~~~~l~~l~vd~l~lD~v~~~~~~l~~l~~~~~~~k~L~~GvVdgrniw~~d~e~v~~~l~~~~~~--~~~l~vsPsC 319 (755)
T 2nq5_A 243 I-DSQVLSQLPVDAFGLDFVYGLEENLEAIKTGAFKGKEIFAGVIDGRNIWSSDFVKTSALLETIEEQ--SAALTIQPSC 319 (755)
T ss_dssp T-THHHHTTSSCSEEEEESSSSHHHHHHHHHTTTTTTSEEEEEEECTTSCBCCCHHHHHHHHHHHHHT--SSEEEEEESS
T ss_pred H-HHHHHHhCCCCEEEEEecCCChhhHHHHHHhcCCCCEEEEEeeCCcccCCCCHHHHHHHHHHHHhh--cCCEEEcCCC
Confidence 7 899999999999999988743256777777446689999999999999999999999999999876 5889999999
Q ss_pred CCCCCCH----------------hHHHHHHHHHHHHHHHHH
Q 024250 239 GLKTRKY----------------TEVKPALSNMVAAAKLLR 263 (270)
Q Consensus 239 gl~~~~~----------------~~a~~kL~~l~~~a~~~~ 263 (270)
||.+.|. ++|.+||.+++.+++.+.
T Consensus 320 sL~h~P~~l~~e~~~~~~~~~~~~fa~~k~~e~~~l~~~~~ 360 (755)
T 2nq5_A 320 SLLHVPVTTKNETDLDPVLRNGLAFADEKLTEVKRLAEHLD 360 (755)
T ss_dssp CGGGSCSCSTTCTTSCHHHHTTBCCHHHHHHHHHHHHHHHT
T ss_pred CcCCCCHHHhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999643 479999999999998775
No 10
>1t7l_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; TIM barrel, methyltetrahydrofolate, zinc; 2.00A {Thermotoga maritima} PDB: 3bq5_A 3bq6_A 1xdj_A 1xr2_A* 1xpg_A*
Probab=100.00 E-value=3.7e-34 Score=278.29 Aligned_cols=238 Identities=15% Similarity=0.147 Sum_probs=195.7
Q ss_pred HHHhhcCCCceeecccceeecCCccc-cCCEEEeeccCC--CCCcHHHHHHHHhccCCCcccccchHHHHHhhhccCCC-
Q 024250 3 EYFGEQLSGFAFTANGWVQSYGSRCV-KPPIIYGDVSRP--KAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRND- 78 (270)
Q Consensus 3 ~~f~~~~~G~~~~~~~~~~~~~~~~~-~~p~i~~~i~~~--~~~~~~~~~~~~~~~~~~vK~~l~GP~Tla~~~~~~~~- 78 (270)
.||+++++- .+.+|.|||++||| .+|++. ...+. ...++++++++++. +..+|++|+||+||+.+++...|
T Consensus 121 ~yf~~arg~---~a~em~kwf~tnyhy~vpe~~-~~~f~~~~~~~~~~~~ea~~~-g~~~~pvl~gp~t~l~l~k~~~~~ 195 (766)
T 1t7l_A 121 TYFDMARGG---KALEMTKFFNTNYHYLVPEIE-TEEFYLLENKPLEDYLFFKSK-GIETAPWVIGPFTFLYLSKRNGEW 195 (766)
T ss_dssp HHHHHHSST---TCCEEEECTTSSCEEEECBCC-CSCCCCSCCHHHHHHHHHHTT-TCCCEEEEECHHHHHHTCEETTEE
T ss_pred HHHHHHcCC---cchhhhhhhcCCCCeEeeeec-CceeccCcchHHHHHHHHHhc-CCCCeeEEEChHHHHHHhccCCcc
Confidence 589999984 56799999999976 789997 55543 46688999999876 77899999999999999885332
Q ss_pred ----CcHHHHHHHHHHHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeec
Q 024250 79 ----QPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMC 154 (270)
Q Consensus 79 ----~~~~~l~~~l~~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c 154 (270)
.+.++++++|.++|.+.+++|.++|+.|||||||+|+.+++. ...+.+..+|+.+ . +.++.|++|
T Consensus 196 ~~~~~~~~~~l~~l~~~y~~~l~~l~~~g~~~vq~dep~l~~d~~~------~~~~~~~~~y~~l----~-~~~~~~~ty 264 (766)
T 1t7l_A 196 IRRPNQMEKLLESLVSVYKEVFEKLVENGCKEILVNEPAFVCDLEK------AHWDLILNVYREL----S-EFPLTVFTY 264 (766)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEECGGGGSCCBH------HHHHHHHHHHHTT----T-TSCEEEECC
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHCCCCEEEecCCeeecCCCH------HHHHHHHHHHHHh----c-CCcEEEECC
Confidence 112389999999999999999999999999999999976632 1234444455444 2 357899999
Q ss_pred cCCchhHHHHHHhCCCCEEEEEccCCCchhHHHhhh-cccCCCeeeceEecCCCCCCCCHHHHHHHHHHHhccccCCceE
Q 024250 155 YSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE-GVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILW 233 (270)
Q Consensus 155 ~g~~~~~~~~l~~~~vd~l~ld~~~~~~~~l~~l~~-~~~~~~~l~~GvVd~~~~~~e~~e~v~~~i~~~~~~~~~~~l~ 233 (270)
||+.. .++.+.++||++||+|+.++. +.++.+.+ ..|.+|.|++||||+||+|+.+.+...+.++.+.. ++
T Consensus 265 f~~~~-~~~~~~~l~v~~~~~d~v~~~-~~~~~~~~~~~~~~~~l~~Gvvdgrniw~~d~~~~~~~~~~~~~------~~ 336 (766)
T 1t7l_A 265 YDSVS-DYEACVSLPVKRLHFDFVSNE-ENLKNLEKHGFPEDKKLVAGVINGRQPWKVDLRKVASLVEKLGA------SA 336 (766)
T ss_dssp SSCCS-CHHHHHTSSCSEEEEECSSCS-HHHHHHHHHCCCTTSEEEEEEECSSCCBCCCHHHHHHHHHHHTC------SE
T ss_pred cCCHH-HHHHHHcCCCcEEEEEecCCH-HHHHHHHhccCCCCceEEEEEecCcchhhcCHHHHHHHHHHhhe------EE
Confidence 99998 899999999999999999864 56777776 24678999999999999999999999999998753 89
Q ss_pred ecCCCCCCCCCH----------------hHHHHHHHHHHHHHHHHHH
Q 024250 234 VNPDCGLKTRKY----------------TEVKPALSNMVAAAKLLRT 264 (270)
Q Consensus 234 vsp~Cgl~~~~~----------------~~a~~kL~~l~~~a~~~~~ 264 (270)
|+|||+|.|.|. ++|.+||.+++.+++.+.+
T Consensus 337 ~~~s~sllh~p~~~~~e~~l~~~~~~~lafa~~k~~e~~~l~~~~~~ 383 (766)
T 1t7l_A 337 ISNSCPLFHLPVTLELENNLPGGLKEKLAFAKEKLEELKMLKDFLEG 383 (766)
T ss_dssp EEESSCGGGSCSCSTTCCSSSTTTGGGBCCHHHHHHHHHHHHHHHTT
T ss_pred EECCcCCeeccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999988432 6899999999999987753
No 11
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=99.87 E-value=8.4e-22 Score=179.36 Aligned_cols=203 Identities=16% Similarity=0.077 Sum_probs=159.2
Q ss_pred cHHHHHHHHhcc-CCCcccccchHHHHHhhhc--cC--C--------C--Cc-HHHHHHHHHHHHHHHHHHHHHcCCCEE
Q 024250 44 TVFWSSLAQSMT-ARPMKGMLTGPVTILNWSF--VR--N--------D--QP-RHETCYQIALAIKDEVEDLEKAGINVI 107 (270)
Q Consensus 44 ~~~~~~~~~~~~-~~~vK~~l~GP~Tla~~~~--~~--~--------~--~~-~~~l~~~l~~~~~~~~~~l~~~G~~~I 107 (270)
+.+.++.+++.. +.|+++.+.||||++..+. .. + | ++ ..++++.+++.+.+.++++.++|++.|
T Consensus 131 ~~ea~~~l~~~~~~~~l~g~~~~P~tla~~l~~gg~s~~~~~~~~~~~~~Pe~~~~ll~~i~~~~~~~~~~~~~aGad~i 210 (359)
T 2inf_A 131 VLETIKLLVNEQLNVPLIGFSGAPFTLASYMTEGGPSKNYNKTKAFMYSMPDAWNLLMSKLADMIIVYVKAQIKAGAKAI 210 (359)
T ss_dssp HHHHHHHHHHHTCSSCEEEEEECHHHHHHHHHHCSCCSSCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHhCCcceEEEcCcHHHHHHHHHcCCCcccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE
Confidence 344556665443 4689999999999996544 21 1 1 22 346888999999999999999999999
Q ss_pred EeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCC-CceEEEeeccCCchhHHHHHHhCCCCEEEEEccCCCchhHH
Q 024250 108 QIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQD-TTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLS 186 (270)
Q Consensus 108 QiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~lH~c~g~~~~~~~~l~~~~vd~l~ld~~~~~~~~l~ 186 (270)
|++||. +..+ +++.|.+++.+.++++++.++. +.++++|+| |+ ..+++.+.++++|++++|+.. +. +
T Consensus 211 ~i~D~~-~~~l-----sp~~f~ef~~p~~~~i~~~i~~~g~~~i~~~~-G~-~~~l~~l~~~g~d~~~~d~~~-d~---~ 278 (359)
T 2inf_A 211 QIFDSW-VGAL-----NQADYRTYIKPVMNRIFSELAKENVPLIMFGV-GA-SHLAGDWHDLPLDVVGLDWRL-GI---D 278 (359)
T ss_dssp EEECTT-GGGS-----CHHHHHHHTHHHHHHHHHHHGGGCSCEEEECT-TC-GGGHHHHHTSSCSEEECCTTS-CH---H
T ss_pred EEeCCc-cccC-----CHHHHHHHhHHHHHHHHHHHHHcCCcEEEEcC-Cc-HHHHHHHHHhCCCEEEeCCCC-CH---H
Confidence 999994 4333 4567889999999999887753 356777877 77 679999999999999999864 33 3
Q ss_pred HhhhcccCCCeeeceEecCCCCCCCCHHHHHHHHHHHhccccC--CceEecCCCCCCCCCHhHHHHHHHHHHHHHHHHHH
Q 024250 187 VFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLET--NILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRT 264 (270)
Q Consensus 187 ~l~~~~~~~~~l~~GvVd~~~~~~e~~e~v~~~i~~~~~~~~~--~~l~vsp~Cgl~~~~~~~a~~kL~~l~~~a~~~~~ 264 (270)
.+++. .++.+..|++|+ ....+++|+|.++++++++. +. +..+++|+||+.+-++. +|+++|+++++.+++
T Consensus 279 ~~~~~--g~~~~l~Gnldp-~~l~~t~e~I~~~v~~~l~~-~~~~~g~Il~~gcgi~~~~~~---enl~a~ve~v~~~~~ 351 (359)
T 2inf_A 279 EARSK--GITKTVQGNLDP-SILLAPWEVIEQKTKEILDQ-GMESDGFIFNLGHGVFPDVSP---EVLKKLTAFVHEYSQ 351 (359)
T ss_dssp HHHHT--TCCSEEECCBCG-GGGGSCHHHHHHHHHHHHHH-HTTSSCEEBCBSSCCCTTSCH---HHHHHHHHHHHHHHH
T ss_pred HHHHc--CCCEEEEecCCh-HHhcCCHHHHHHHHHHHHHh-CCCCCCeEEeCCCCCCCCcCH---HHHHHHHHHHHHhhh
Confidence 34432 246799999999 55689999999999999988 65 37999999999876665 999999999999876
Q ss_pred H
Q 024250 265 Q 265 (270)
Q Consensus 265 ~ 265 (270)
.
T Consensus 352 ~ 352 (359)
T 2inf_A 352 N 352 (359)
T ss_dssp H
T ss_pred h
Confidence 4
No 12
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1
Probab=99.84 E-value=3.1e-21 Score=175.15 Aligned_cols=202 Identities=14% Similarity=0.110 Sum_probs=156.6
Q ss_pred cHHHHHHHHhcc--CCCcccccchHHHHHhhhcc----CC--------C--Cc-HHHHHHHHHHHHHHHHHHHHHcCCCE
Q 024250 44 TVFWSSLAQSMT--ARPMKGMLTGPVTILNWSFV----RN--------D--QP-RHETCYQIALAIKDEVEDLEKAGINV 106 (270)
Q Consensus 44 ~~~~~~~~~~~~--~~~vK~~l~GP~Tla~~~~~----~~--------~--~~-~~~l~~~l~~~~~~~~~~l~~~G~~~ 106 (270)
+.+.++.+++.. +.|+++.+.||||++..+.. .. | ++ ..++++.+++.+.+.++++.++|++.
T Consensus 130 v~e~~~~l~~~~~~~~~~~g~~~~P~tla~~l~~g~~~~~~~~~~~~~~~~Pe~~~~ll~~l~~~~~~~~~~~~~aGad~ 209 (353)
T 1j93_A 130 VGEALTILRKEVNNQAAVLGFVGAPFTLASYVVEGGSSKNFTKIKRLAFAEPKVLHALLQKFATSMAKYIRYQADSGAQA 209 (353)
T ss_dssp HHHHHHHHHHHHTTSSEEEEEEECHHHHHHHHHHSBCCSSCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHhCCCceEEEecChHHHHHHHHHcCCCcccHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE
Confidence 445666666544 35889999999999965432 00 1 22 35688899999999999999999999
Q ss_pred EEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCC---CceEEEeeccCCchhHHHHHHhCCCCEEEEEccCCCch
Q 024250 107 IQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQD---TTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEK 183 (270)
Q Consensus 107 IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~lH~c~g~~~~~~~~l~~~~vd~l~ld~~~~~~~ 183 (270)
||++||..+ .+ +++.|.+++.+.++++++.++. +++ ++|+|.|+ ..+++.+.++++|++++|+.. +.
T Consensus 210 iqi~D~~~~-~l-----sp~~f~ef~~p~~~~i~~~i~~~~~~~~-~ih~c~g~-~~~l~~l~~~g~d~~~~d~~~-d~- 279 (353)
T 1j93_A 210 VQIFDSWAT-EL-----SPVDFEEFSLPYLKQIVDSVKLTHPNLP-LILYASGS-GGLLERLPLTGVDVVSLDWTV-DM- 279 (353)
T ss_dssp EEEECGGGG-GS-----CHHHHHHHTHHHHHHHHHHHHHHSTTCC-EEEECSSC-TTTGGGGGGGCCSEEECCTTS-CH-
T ss_pred EEEeCcccc-cC-----CHHHHHHHhHHHHHHHHHHHHHhCCCCC-EEEECCCh-HHHHHHHHhcCCCEEEeCCCC-CH-
Confidence 999999533 33 4567889999999999887742 344 47999654 568899999999999999864 33
Q ss_pred hHHHhhhcccCCCeeeceEecCCCCCCCCHHHHHHHHHHHhccccCCceEecCCCCCCCCCHhHHHHHHHHHHHHHHHH
Q 024250 184 LLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLL 262 (270)
Q Consensus 184 ~l~~l~~~~~~~~~l~~GvVd~~~~~~e~~e~v~~~i~~~~~~~~~~~l~vsp~Cgl~~~~~~~a~~kL~~l~~~a~~~ 262 (270)
+.+++.. .++.+..|++|+ ....+++|+|.++++++++.++.++.+++|+||+.+-++. +|+++|+++++.+
T Consensus 280 --~~~~~~~-g~~~~l~Gnldp-~~l~~~~e~i~~~v~~~l~~~~~~g~I~~~g~gi~~~~~~---enl~a~ve~v~~~ 351 (353)
T 1j93_A 280 --ADGRRRL-GPNVAIQGNVDP-GVLFGSKEFITNRINDTVKKAGKGKHILNLGHGIKVGTPE---ENFAHFFEIAKGL 351 (353)
T ss_dssp --HHHHHHT-CSSSEEECCBCG-GGGGSCHHHHHHHHHHHHHHHCSSSEEBCBSSCCCTTCCH---HHHHHHHHHHHTC
T ss_pred --HHHHHHc-CCCeEEEecCCH-HHHcCCHHHHHHHHHHHHHHhCCCCEEEeCCCCCCCCCCH---HHHHHHHHHHHHh
Confidence 3344321 246799999999 5568999999999999999887788999999999876665 9999999998753
No 13
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=99.80 E-value=3.9e-19 Score=162.20 Aligned_cols=204 Identities=17% Similarity=0.131 Sum_probs=158.0
Q ss_pred HHHHHHHhcc--CCCcccccchHHHHHhhhc--cC--C--------CC---cHHHHHHHHHHHHHHHHHHHHHcCCCEEE
Q 024250 46 FWSSLAQSMT--ARPMKGMLTGPVTILNWSF--VR--N--------DQ---PRHETCYQIALAIKDEVEDLEKAGINVIQ 108 (270)
Q Consensus 46 ~~~~~~~~~~--~~~vK~~l~GP~Tla~~~~--~~--~--------~~---~~~~l~~~l~~~~~~~~~~l~~~G~~~IQ 108 (270)
+.++.+++.. +.|+.+.+.||||++..+. +. . |. ...++++.+++.+.+.++.+.++|++.||
T Consensus 136 eai~~l~~~~~~~~plig~~~~P~tla~~l~egg~~~~~~~~~~~~~~~Pe~~~~ll~~l~~~~~~~~~~~i~aGad~i~ 215 (367)
T 1r3s_A 136 QAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLRILTDALVPYLVGQVVAGAQALQ 215 (367)
T ss_dssp HHHHHHHHHHTTSSCEEEEEECHHHHHHHHHHSSCCSSCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHcCCCccEEEEcCcHHHHHHHHHcCCCcccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEE
Confidence 3444454433 4688889999999997553 11 0 11 22456788889999999999999999999
Q ss_pred eccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCC------C--CceEEEeeccCCchhHHHHHHhCCCCEEEEEccCC
Q 024250 109 IDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQ------D--TTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRS 180 (270)
Q Consensus 109 iDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~--~~~i~lH~c~g~~~~~~~~l~~~~vd~l~ld~~~~ 180 (270)
+.|+..+ .+ .++.|.+++.+.++++++.++ + ++++++|+| |+ ...++.+.++++|++++|+..
T Consensus 216 i~D~~~~-~l-----sp~~f~ef~~p~~k~i~~~i~~~~~~~g~~~~p~i~~~~-G~-~~~l~~l~~~g~d~i~~d~~~- 286 (367)
T 1r3s_A 216 LFESHAG-HL-----GPQLFNKFALPYIRDVAKQVKARLREAGLAPVPMIIFAK-DG-HFALEELAQAGYEVVGLDWTV- 286 (367)
T ss_dssp EEETTGG-GS-----CHHHHHHHTHHHHHHHHHHHHHHHHHTTCCCCCEEEEET-TC-GGGHHHHTTSSCSEEECCTTS-
T ss_pred EecCccc-cC-----CHHHHHHHhHHHHHHHHHHHhhhhccccCCCCCeEEEcC-Cc-HHHHHHHHhcCCCEEEeCCCC-
Confidence 9998543 23 467788999999999887775 1 367889988 66 678999999999999999754
Q ss_pred CchhHHHhhhcccCCCeeeceEecCCCCCCCCHHHHHHHHHHHhccccCCceEecCCCCCCCCCHhHHHHHHHHHHHHHH
Q 024250 181 DEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAK 260 (270)
Q Consensus 181 ~~~~l~~l~~~~~~~~~l~~GvVd~~~~~~e~~e~v~~~i~~~~~~~~~~~l~vsp~Cgl~~~~~~~a~~kL~~l~~~a~ 260 (270)
+. +..++.. .++....|++|+ .....|+++|.+.++++++.++....+++++||+.+-++. +++++|+++++
T Consensus 287 dl---~~a~~~~-g~~~~l~Gnldp-~~L~gt~e~i~~~v~~~l~~~g~~g~I~~~ghgi~~~~p~---env~a~v~~v~ 358 (367)
T 1r3s_A 287 AP---KKARECV-GKTVTLQGNLDP-CALYASEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDP---EHVGAFVDAVH 358 (367)
T ss_dssp CH---HHHHHHH-CSSSEEEEEECG-GGGGSCHHHHHHHHHHHHHHHCSSSEEEEESSCCCTTCCH---HHHHHHHHHHH
T ss_pred CH---HHHHHHc-CCCeEEEeCCCh-HHhcCCHHHHHHHHHHHHHHhCCCCeeecCCCCCCCCCCH---HHHHHHHHHHH
Confidence 33 3333321 245789999999 4557999999999999999876678999999999998887 99999999999
Q ss_pred HHHHHH
Q 024250 261 LLRTQL 266 (270)
Q Consensus 261 ~~~~~~ 266 (270)
.+++++
T Consensus 359 ~~~~~~ 364 (367)
T 1r3s_A 359 KHSRLL 364 (367)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 988775
No 14
>3cyv_A URO-D, UPD, uroporphyrinogen decarboxylase; alpha/beta barrel, cytoplasm, lyase, porphyrin biosynthesis; 2.80A {Shigella flexneri}
Probab=99.80 E-value=1.2e-18 Score=158.22 Aligned_cols=207 Identities=14% Similarity=0.078 Sum_probs=159.7
Q ss_pred cHHHHHHHHhcc--CCCcccccchHHHHHhhhcc-----CC-------CCc---HHHHHHHHHHHHHHHHHHHHHcCCCE
Q 024250 44 TVFWSSLAQSMT--ARPMKGMLTGPVTILNWSFV-----RN-------DQP---RHETCYQIALAIKDEVEDLEKAGINV 106 (270)
Q Consensus 44 ~~~~~~~~~~~~--~~~vK~~l~GP~Tla~~~~~-----~~-------~~~---~~~l~~~l~~~~~~~~~~l~~~G~~~ 106 (270)
+.+.++.+++.. +.|+.+.+.||||++..+.. .. +.+ ..++++.+++.+.+.++.+.++|++.
T Consensus 124 v~eai~~l~~~~~~~~plig~~~~P~tla~~l~~g~~~~~~~~~~~~~~~~Pe~~~~ll~~l~~~~~~~~~~~~~aGad~ 203 (354)
T 3cyv_A 124 VMNAVRTIRHELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQA 203 (354)
T ss_dssp HHHHHHHHHHHTTTSSCEEEEEECHHHHHHHHHHSSCCSSCHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHhCCCeeEEEeCCcHHHHHHHHhCCCCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE
Confidence 445556665443 36899999999999975431 00 222 34678888899999999999999999
Q ss_pred EEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCC-----CceEEEeeccCCchhHHHHHHhCCCCEEEEEccCCC
Q 024250 107 IQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQD-----TTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSD 181 (270)
Q Consensus 107 IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~i~lH~c~g~~~~~~~~l~~~~vd~l~ld~~~~~ 181 (270)
||+.||..+ .+ .++.|.+++.+.++++++.++. +++ ++|.|.|. ...++.+.++++|++++|... +
T Consensus 204 i~i~d~~~~-~l-----sp~~f~ef~~p~~k~i~~~i~~~~~~~~~~-ii~~~~g~-~~~l~~l~~~g~d~i~~d~~~-d 274 (354)
T 3cyv_A 204 VMIFDTWGG-VL-----TGRDYQQFSLYYMHKIVDGLLRENDGRRVP-VTLFTKGG-GQWLEAMAETGCDALGLDWTT-D 274 (354)
T ss_dssp EEEECTTGG-GS-----CHHHHHHHTHHHHHHHHHHSCSEETTEECC-EEEECTTT-TTTHHHHHTTSCSEEECCTTS-C
T ss_pred EEEeCCccc-cC-----CHHHHHHHhHHHHHHHHHHHHHhcCCCCCC-EEEECCCH-HHHHHHHHhcCCCEEEeCCCC-C
Confidence 999998644 23 4677899999999999998863 244 67888554 678999999999999999754 3
Q ss_pred chhHHHhhhcccCCCeeeceEecCCCCCCCCHHHHHHHHHHHhccccC-CceEecCCCCCCCCCHhHHHHHHHHHHHHHH
Q 024250 182 EKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLET-NILWVNPDCGLKTRKYTEVKPALSNMVAAAK 260 (270)
Q Consensus 182 ~~~l~~l~~~~~~~~~l~~GvVd~~~~~~e~~e~v~~~i~~~~~~~~~-~~l~vsp~Cgl~~~~~~~a~~kL~~l~~~a~ 260 (270)
. +..++.. .++....|++|+. ...+|+|+|.+.++++++.++. ...+++|+||+.+.++. +++++|+++++
T Consensus 275 l---~~~~~~~-g~~~~l~Gn~dp~-~l~~t~e~i~~~v~~~l~~~g~~~g~I~~~g~gi~~~~p~---env~a~v~~v~ 346 (354)
T 3cyv_A 275 I---ADARRRV-GNKVALQGNMDPS-MLYAPPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPP---EHAGVFVEAVH 346 (354)
T ss_dssp H---HHHHHHH-TTTSEEECCBCGG-GGGSCHHHHHHHHHHHHTTTTTSSCEEBCBSSCCCTTSCH---HHHHHHHHHHH
T ss_pred H---HHHHHHh-CCCeEEEecCChH-HhCCCHHHHHHHHHHHHHHhCCCCCeEEecCCCCCCCCCH---HHHHHHHHHHH
Confidence 3 2233321 2467899999984 4579999999999999998765 57999999999998877 99999999999
Q ss_pred HHHHHHh
Q 024250 261 LLRTQLA 267 (270)
Q Consensus 261 ~~~~~~~ 267 (270)
.+++++.
T Consensus 347 ~~~~~~~ 353 (354)
T 3cyv_A 347 RLSEQYH 353 (354)
T ss_dssp HHHGGGG
T ss_pred HHhHHhc
Confidence 9887653
No 15
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=99.78 E-value=1.3e-18 Score=157.03 Aligned_cols=200 Identities=16% Similarity=0.144 Sum_probs=154.4
Q ss_pred cHHHHHHHHhcc-CCCcccccchHHHHHhhhc--cC--C--------CCc---HHHHHHHHHHHHHHHHHHHHHcCCCEE
Q 024250 44 TVFWSSLAQSMT-ARPMKGMLTGPVTILNWSF--VR--N--------DQP---RHETCYQIALAIKDEVEDLEKAGINVI 107 (270)
Q Consensus 44 ~~~~~~~~~~~~-~~~vK~~l~GP~Tla~~~~--~~--~--------~~~---~~~l~~~l~~~~~~~~~~l~~~G~~~I 107 (270)
+.+.++.+++.. +.|+.+.+.||||++..+. .. + +.+ ..++++.+++.+.+.++++.++|++.|
T Consensus 117 v~eai~~l~~~~~~~plig~~~~P~tla~~l~egg~~~~~~~~~~~~~~~Pe~~~~ll~~i~~~~~~~~~~~~~aGad~i 196 (338)
T 2eja_A 117 VYEIIKRVKEAQDEVPVIGFAGAPFTLLSYLIEGGASKDFKSTKLFMWENPKEYKRLMDILTETVLAYLKEQIKAGADVV 196 (338)
T ss_dssp HHHHHHHHHHHCCSSCEEEEEECHHHHHHHHHHTSCCSSCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHhcCccEEEecchHHHHHHHHHcCCCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE
Confidence 334555555433 4688999999999997554 21 1 112 346788888999999999999999999
Q ss_pred EeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCC--CceEEEeeccCCchhHHHHHHhCCCCEEEEEccCCCchhH
Q 024250 108 QIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQD--TTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLL 185 (270)
Q Consensus 108 QiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~lH~c~g~~~~~~~~l~~~~vd~l~ld~~~~~~~~l 185 (270)
|+.||..+ .+ .++.|.+++.+.++++++.++. +.++++|+| |+ ...++.+.++++|++++|+.. +.
T Consensus 197 ~i~d~~~~-~l-----sp~~f~ef~~p~~k~i~~~i~~~~g~~~i~~~~-g~-~~~l~~l~~~g~d~~~~d~~~-dl--- 264 (338)
T 2eja_A 197 QIFDSWVN-NL-----SLEDYGEYVYPYVNYLISELKDFSDTPVIYFFR-GS-SSFIDLAVDYRADALSVDWSV-DI--- 264 (338)
T ss_dssp EEEETTGG-GS-----CHHHHHHHTHHHHHHHHHHHHHHCCCCEEEEES-SH-HHHHHHHTTSCCSEEECCTTS-CH---
T ss_pred EEecCccc-cC-----CHHHHHHHhHHHHHHHHHHHhhcCCCCEEEEcC-Cc-HHHHHHHHHcCCCEEEeCCCC-CH---
Confidence 99999655 23 4567889999999998877731 356778877 66 779999999999999999854 32
Q ss_pred HHhhhcccCCCeeeceEecCCCCCCCCHHHHHHHHHHHhccccC-CceEecCCCCCCCCCHhHHHHHHHHHHHHHHHH
Q 024250 186 SVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLET-NILWVNPDCGLKTRKYTEVKPALSNMVAAAKLL 262 (270)
Q Consensus 186 ~~l~~~~~~~~~l~~GvVd~~~~~~e~~e~v~~~i~~~~~~~~~-~~l~vsp~Cgl~~~~~~~a~~kL~~l~~~a~~~ 262 (270)
+..++. . +....|++|+ .....|+|+|.+.++++++.++. ...+++|+||+.+-++. +|+++|+++++.+
T Consensus 265 ~~~~~~--~-~~~l~Gn~dp-~~l~gt~e~i~~~v~~~l~~~g~~~g~I~~~g~gi~~~~p~---en~~a~v~~v~~~ 335 (338)
T 2eja_A 265 PELFKI--Y-DKGFQGNLEP-AVLYASEEVIEEKTLGLLRRIPVKTRYVFNLGHGLAPDMEL---EKVKYLVDLVKSF 335 (338)
T ss_dssp HHHHHH--C-CSEEECCBCG-GGGGSCHHHHHHHHHHHHTTCCCSSSEEBCBSSCCCTTSCH---HHHHHHHHHHHTC
T ss_pred HHHHHh--C-CeEEEECCCH-HHhcCCHHHHHHHHHHHHHHhCCCCCeEEeCCCCCCCCCCH---HHHHHHHHHHHHh
Confidence 334432 2 4788999998 45579999999999999998765 57999999999888777 9999999998754
No 16
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=99.77 E-value=1.7e-17 Score=150.21 Aligned_cols=202 Identities=16% Similarity=0.163 Sum_probs=154.1
Q ss_pred cHHHHHHHHhcc--CCCcccccchHHHHHhhhccC---------CCCcHHHHHHHHHHHHHHHHHHHHHcCCCEEEeccC
Q 024250 44 TVFWSSLAQSMT--ARPMKGMLTGPVTILNWSFVR---------NDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEA 112 (270)
Q Consensus 44 ~~~~~~~~~~~~--~~~vK~~l~GP~Tla~~~~~~---------~~~~~~~l~~~l~~~~~~~~~~l~~~G~~~IQiDEP 112 (270)
+.+.++.+++.. +.|+.+.+-||||++..+... +.....++++.+++.+.+.++...++|++.|||-|+
T Consensus 133 v~eai~~l~~~l~~~~pligf~g~P~Tla~~l~~~~~~~~~~~~~pe~~~~ll~~i~~~~~~~~~~qi~aGad~i~i~D~ 212 (348)
T 4ay7_A 133 VLEAIKIIREKVGPDVPIVGGMEGPVTVASDLVSVKSFMKWSIKKTDLLEQALDIATEASIIYANAMVEAGADVIAIADP 212 (348)
T ss_dssp HHHHHHHHHHHHCTTSCEEEEEECHHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHTCSEEEEECG
T ss_pred HHHHHHHHHHHhCCCeeEEEeccchHHHHHhcccchHHHHHHHHChHhHHHHHHHHHHHHHHHHHHHHhcCCCcceeecc
Confidence 344555555443 468889999999999654321 111234567778888888999999999999999998
Q ss_pred ccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHHHHHhCCCCEEEEEccCCCchhHHHhhhcc
Q 024250 113 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGV 192 (270)
Q Consensus 113 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~~l~~~~vd~l~ld~~~~~~~~l~~l~~~~ 192 (270)
..+..+ + .++.|.+++.+.++++++.++. ..++|+| |++...++.+.++++|++++|....+. +..++..
T Consensus 213 ~a~~~~-l---sp~~f~~f~~p~~k~i~~~~~~--~~iih~~-g~~~~~l~~~~~~g~d~i~~d~~~~~~---~~~k~~~ 282 (348)
T 4ay7_A 213 VASPDL-M---SPDSFRQFLKSRLQKFASSVNS--VTVLHIC-GNVNPILSDMADCGFEGLSVEEKIGSA---KKGKEVI 282 (348)
T ss_dssp GGSTTT-S---CHHHHHHHHHHHHHHHHHHSSS--EEEEECC-SCCHHHHHHHHTSCCSEEECCGGGCCH---HHHHHHH
T ss_pred cccccc-C---CHHHHHHHhhHHHHHHHhhccC--CcEEEec-CCcHHHHHHHHHhccccccccchhhHH---HHHHHHh
Confidence 766422 1 4677889999999999998864 3468999 788889999999999999999865333 3333321
Q ss_pred cCCCeeeceEecCCC-CCCCCHHHHHHHHHHHhccccCCceEecCCCCCCCCCHhHHHHHHHHHHHHHHHH
Q 024250 193 KYGAGIGPGVYDIHS-PRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLL 262 (270)
Q Consensus 193 ~~~~~l~~GvVd~~~-~~~e~~e~v~~~i~~~~~~~~~~~l~vsp~Cgl~~~~~~~a~~kL~~l~~~a~~~ 262 (270)
.++....|.+|... ....++|+|.+.++++++. ...+++++||+.+-++. +|+++|+++++++
T Consensus 283 -g~~~~l~Gnldp~~~l~~g~~e~i~~~v~~~l~~---~g~I~~~Ghgi~p~tp~---env~a~v~av~ey 346 (348)
T 4ay7_A 283 -GTRARLVGNVSSPFTLLPGPVDKIKAEAKEALEG---GIDVLAPGCGIAPMTPL---ENVKALVAARDEF 346 (348)
T ss_dssp -TTSSEEEEEECCCCCCTTCCHHHHHHHHHHHHHT---TCSEEEESSSCCTTCCH---HHHHHHHHHHHHH
T ss_pred -CCCEEEEcCCCChHhhcCCCHHHHHHHHHHHHhC---CCCEEeCCCccCCCCCH---HHHHHHHHHHHHh
Confidence 24566779998754 4578999999999999874 45689999999999888 9999999999875
No 17
>4exq_A UPD, URO-D, uroporphyrinogen decarboxylase; ssgcid, NIH, SBRI, heme biosynthesis, structural GENO niaid; 1.65A {Burkholderia thailandensis}
Probab=99.74 E-value=2.6e-17 Score=150.11 Aligned_cols=207 Identities=13% Similarity=0.075 Sum_probs=156.7
Q ss_pred cHHHHHHHHhc-cC------CCcccccchHHHHHhhhcc----CC--------CC---cHHHHHHHHHHHHHHHHHHHHH
Q 024250 44 TVFWSSLAQSM-TA------RPMKGMLTGPVTILNWSFV----RN--------DQ---PRHETCYQIALAIKDEVEDLEK 101 (270)
Q Consensus 44 ~~~~~~~~~~~-~~------~~vK~~l~GP~Tla~~~~~----~~--------~~---~~~~l~~~l~~~~~~~~~~l~~ 101 (270)
+++.++.+++. .+ .|+.+.+.||||++..+.. .+ +. ...++++.+++.+.+.++++.+
T Consensus 129 v~eai~~l~~~l~~~~~~~~vpligf~gaP~Tla~~l~~g~~s~~~~~~~~~~~~~Pe~~~~ll~~i~~~~~~y~~~qi~ 208 (368)
T 4exq_A 129 VTDAVREIRRALTDGEGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMHRILDVNAQAVAAYLNAQIE 208 (368)
T ss_dssp HHHHHHHHHHHTBCTTSCBSSCEEEEEECHHHHHHHHHHTBCCSSCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCcCcccceeEEEeCCcHHHHHHHHHcCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555666543 23 5888889999999975431 01 11 2355777888888999999999
Q ss_pred cCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCC-----CceEEEeeccCCchhHHHHHHhCCCCEEEEE
Q 024250 102 AGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQD-----TTQIHTHMCYSNFNDIIHSIIDMDADVITIE 176 (270)
Q Consensus 102 ~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~i~lH~c~g~~~~~~~~l~~~~vd~l~ld 176 (270)
+|++.||+-|+.- ..+ .++.|.+++.+.++++++.++. +++++.|+| |. ...++.+.++++|++++|
T Consensus 209 aGad~i~ifDs~~-~~L-----sp~~f~ef~~Py~k~i~~~l~~~~~g~~~pvi~f~~-g~-~~~l~~l~~~g~d~i~~d 280 (368)
T 4exq_A 209 AGAQAVMIFDTWG-GAL-----ADGAYQRFSLDYIRRVVAQLKREHDGARVPAIAFTK-GG-GLWLEDLAATGVDAVGLD 280 (368)
T ss_dssp HTCSEEEEEETTG-GGS-----CTTHHHHHTHHHHHHHHHTSCCEETTEECCEEEEET-TC-GGGHHHHHTSSCSEEECC
T ss_pred hCCCEEEEeCCcc-ccC-----CHHHHHHHhHHHHHHHHHHHHHhcCCCCCcEEEEcC-Cc-HHHHHHHHHhCCCEEeeC
Confidence 9999999987753 333 3457889999999999998864 256655555 54 468899999999999999
Q ss_pred ccCCCchhHHHhhhcccCCCeeeceEecCCCCCCCCHHHHHHHHHHHhccccC-CceEecCCCCCCCCCHhHHHHHHHHH
Q 024250 177 NSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLET-NILWVNPDCGLKTRKYTEVKPALSNM 255 (270)
Q Consensus 177 ~~~~~~~~l~~l~~~~~~~~~l~~GvVd~~~~~~e~~e~v~~~i~~~~~~~~~-~~l~vsp~Cgl~~~~~~~a~~kL~~l 255 (270)
... +. +..++.. .++....|++|+... ..++++|.+.++++++..+. ...+++++||+.+-++. +++++|
T Consensus 281 ~~~-dl---~~ak~~~-g~~~~l~Gnldp~~L-~gt~e~I~~~v~~~l~~~g~~~g~I~n~Ghgi~p~tp~---Env~a~ 351 (368)
T 4exq_A 281 WTV-NL---GRARERV-AGRVALQGNLDPTIL-FAPPEAIRAEARAVLDSYGNHPGHVFNLGHGISQFTPP---EHVAEL 351 (368)
T ss_dssp TTS-CH---HHHHHHH-TTSSEEEEEECGGGG-GSCHHHHHHHHHHHHHHHCSCSCEEEEESSCCCTTCCH---HHHHHH
T ss_pred CCC-CH---HHHHHHh-CCCEEEEECCCHHHh-CCCHHHHHHHHHHHHHHhCCCCCEEEeCCCCCCCCcCH---HHHHHH
Confidence 865 33 2333321 245678899998754 79999999999999998764 67999999999998887 999999
Q ss_pred HHHHHHHHHHHh
Q 024250 256 VAAAKLLRTQLA 267 (270)
Q Consensus 256 ~~~a~~~~~~~~ 267 (270)
+++++.++..+.
T Consensus 352 veav~~~~~~~~ 363 (368)
T 4exq_A 352 VDEVHRHSRAIR 363 (368)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHhCHHhh
Confidence 999999988764
No 18
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=95.86 E-value=0.75 Score=39.71 Aligned_cols=151 Identities=13% Similarity=0.152 Sum_probs=84.3
Q ss_pred HHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHHHHHhCCCC
Q 024250 92 IKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDAD 171 (270)
Q Consensus 92 ~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~~l~~~~vd 171 (270)
..+.++++.+.|+++|=|---+...+ ..+-..++..+.+.++++.+.+.. ++++.++++ +. ++.+.-++.+++
T Consensus 40 a~~~a~~~v~~GAdiIDIGgestrPg--a~~v~~~eE~~rv~pvi~~l~~~~--~~piSIDT~--~~-~va~aAl~aGa~ 112 (282)
T 1aj0_A 40 AVKHANLMINAGATIIDVGGESTRPG--AAEVSVEEELQRVIPVVEAIAQRF--EVWISVDTS--KP-EVIRESAKVGAH 112 (282)
T ss_dssp HHHHHHHHHHHTCSEEEEESSCCSTT--CCCCCHHHHHHHHHHHHHHHHHHC--CCEEEEECC--CH-HHHHHHHHTTCC
T ss_pred HHHHHHHHHHCCCCEEEECCCcCCCC--CCcCCHHHHHHHHHHHHHHHHhhc--CCeEEEeCC--CH-HHHHHHHHcCCC
Confidence 33456777888999987764222111 011133556777788887775533 356888877 33 467777888888
Q ss_pred EEEEEccC-CCchhHHHhhhcccCCCeeeceEecC--CCCC-C---CC-----HHHHHHHHHHHhcc-ccCCceEecCCC
Q 024250 172 VITIENSR-SDEKLLSVFREGVKYGAGIGPGVYDI--HSPR-I---PS-----TEEIADRINKMLAV-LETNILWVNPDC 238 (270)
Q Consensus 172 ~l~ld~~~-~~~~~l~~l~~~~~~~~~l~~GvVd~--~~~~-~---e~-----~e~v~~~i~~~~~~-~~~~~l~vsp~C 238 (270)
.|. |... .+.+.++..+++ +-.+++=-..+ ++.. . ++ .+...++++.+.+. ++++++++.|+.
T Consensus 113 iIN-dvsg~~d~~~~~~~a~~---~~~vVlmh~~G~p~tm~~~~~y~d~~~ev~~~l~~~i~~a~~~Gi~~~~IilDPg~ 188 (282)
T 1aj0_A 113 IIN-DIRSLSEPGALEAAAET---GLPVCLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEQAGIAKEKLLLDPGF 188 (282)
T ss_dssp EEE-ETTTTCSTTHHHHHHHH---TCCEEEECCSSCTTCCSCCCCCSCHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCT
T ss_pred EEE-ECCCCCCHHHHHHHHHh---CCeEEEEccCCCCccccccCccchHHHHHHHHHHHHHHHHHHcCCChhhEEEeCCC
Confidence 774 3221 244556666664 22222211111 1110 1 11 45666666666543 456799999999
Q ss_pred CCCCCCHhHHHHHHHH
Q 024250 239 GLKTRKYTEVKPALSN 254 (270)
Q Consensus 239 gl~~~~~~~a~~kL~~ 254 (270)
||+ .+.+..++-|+.
T Consensus 189 gf~-k~~~~n~~ll~~ 203 (282)
T 1aj0_A 189 GFG-KNLSHNYSLLAR 203 (282)
T ss_dssp TSS-CCHHHHHHHHHT
T ss_pred Ccc-cCHHHHHHHHHH
Confidence 994 466633443433
No 19
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=95.55 E-value=0.63 Score=40.48 Aligned_cols=152 Identities=14% Similarity=0.145 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHHHHHhCCC
Q 024250 91 AIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDA 170 (270)
Q Consensus 91 ~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~~l~~~~v 170 (270)
...+.++++.+.|+++|-|---+-..+. ..-+.++..+.+.+.++.+.+.. ++++.+.++ +. ++.+..++.++
T Consensus 64 ~a~~~a~~~v~~GAdiIDIGgeStrPga--~~v~~~eE~~RvvpvI~~l~~~~--~vpiSIDT~--~~-~V~~aAl~aGa 136 (297)
T 1tx2_A 64 AAVRHAKEMRDEGAHIIDIGGESTRPGF--AKVSVEEEIKRVVPMIQAVSKEV--KLPISIDTY--KA-EVAKQAIEAGA 136 (297)
T ss_dssp HHHHHHHHHHHTTCSEEEEESCC----C--CCCCHHHHHHHHHHHHHHHHHHS--CSCEEEECS--CH-HHHHHHHHHTC
T ss_pred HHHHHHHHHHHcCCCEEEECCCcCCCCC--CCCCHHHHHHHHHHHHHHHHhcC--CceEEEeCC--CH-HHHHHHHHcCC
Confidence 3444567778999999888742211111 11134556777777777765433 256788877 33 46677777898
Q ss_pred CEEEEEccCC--CchhHHHhhhcccCCCeeeceEecCCCCCCCC----HHHHHHHHHHHhcc-ccCCceEecCCCCCCCC
Q 024250 171 DVITIENSRS--DEKLLSVFREGVKYGAGIGPGVYDIHSPRIPS----TEEIADRINKMLAV-LETNILWVNPDCGLKTR 243 (270)
Q Consensus 171 d~l~ld~~~~--~~~~l~~l~~~~~~~~~l~~GvVd~~~~~~e~----~e~v~~~i~~~~~~-~~~~~l~vsp~Cgl~~~ 243 (270)
+.| -|.... +.+.++..+++ +-.+++--..+....... .+.+.++++.+.+. ++.+++++.|+.|| ..
T Consensus 137 ~iI-Ndvsg~~~d~~m~~~aa~~---g~~vVlmh~~G~p~y~d~v~ev~~~l~~~i~~a~~~GI~~~~IilDPg~Gf-gk 211 (297)
T 1tx2_A 137 HII-NDIWGAKAEPKIAEVAAHY---DVPIILMHNRDNMNYRNLMADMIADLYDSIKIAKDAGVRDENIILDPGIGF-AK 211 (297)
T ss_dssp CEE-EETTTTSSCTHHHHHHHHH---TCCEEEECCCSCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTS-SC
T ss_pred CEE-EECCCCCCCHHHHHHHHHh---CCcEEEEeCCCCCCcchHHHHHHHHHHHHHHHHHHcCCChhcEEEeCCCCc-CC
Confidence 888 454331 34455666654 322222211111111111 24445555555532 34579999999999 55
Q ss_pred CHhHHHHHHHH
Q 024250 244 KYTEVKPALSN 254 (270)
Q Consensus 244 ~~~~a~~kL~~ 254 (270)
+.+..++-|+.
T Consensus 212 ~~~~n~~ll~~ 222 (297)
T 1tx2_A 212 TPEQNLEAMRN 222 (297)
T ss_dssp CHHHHHHHHHT
T ss_pred CHHHHHHHHHH
Confidence 66633333333
No 20
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=95.54 E-value=0.99 Score=38.89 Aligned_cols=151 Identities=10% Similarity=0.145 Sum_probs=81.3
Q ss_pred HHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHHHHHhCCCCE
Q 024250 93 KDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADV 172 (270)
Q Consensus 93 ~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~~l~~~~vd~ 172 (270)
.+.++++.+.|+++|=|---+-..+. .+-+.++.++.+.+.++.+.+. ++++.++++ +. ++.+.-++.+++.
T Consensus 32 ~~~a~~~v~~GAdiIDIGgestrpga--~~v~~~eE~~Rv~pvi~~l~~~---~~piSIDT~--~~-~va~aAl~aGa~i 103 (280)
T 1eye_A 32 VKHGLAMAAAGAGIVDVGGESSRPGA--TRVDPAVETSRVIPVVKELAAQ---GITVSIDTM--RA-DVARAALQNGAQM 103 (280)
T ss_dssp HHHHHHHHHTTCSEEEEECC----------------HHHHHHHHHHHHHT---TCCEEEECS--CH-HHHHHHHHTTCCE
T ss_pred HHHHHHHHHCCCCEEEECCccCCCCC--CCCCHHHHHHHHHHHHHHhhcC---CCEEEEeCC--CH-HHHHHHHHcCCCE
Confidence 34567788899999877631111010 0012345577778888887653 356788877 33 4677778888877
Q ss_pred EEEEccC--CCchhHHHhhhcccCCCeeeceEecC--CCCC-----CCC-----HHHHHHHHHHHhcc-ccCCceEecCC
Q 024250 173 ITIENSR--SDEKLLSVFREGVKYGAGIGPGVYDI--HSPR-----IPS-----TEEIADRINKMLAV-LETNILWVNPD 237 (270)
Q Consensus 173 l~ld~~~--~~~~~l~~l~~~~~~~~~l~~GvVd~--~~~~-----~e~-----~e~v~~~i~~~~~~-~~~~~l~vsp~ 237 (270)
|. |... .+.+.++..+++ +-.+++--..+ ++.. -++ .+.+.++++.+.+. ++++++++.|+
T Consensus 104 IN-dvsg~~~d~~m~~~~a~~---~~~vVlmh~~G~p~tm~~~~~~y~dv~~~v~~~l~~~i~~a~~~Gi~~~~IilDPg 179 (280)
T 1eye_A 104 VN-DVSGGRADPAMGPLLAEA---DVPWVLMHWRAVSADTPHVPVRYGNVVAEVRADLLASVADAVAAGVDPARLVLDPG 179 (280)
T ss_dssp EE-ETTTTSSCTTHHHHHHHH---TCCEEEECCCCSCTTCTTSCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEECC
T ss_pred EE-ECCCCCCCHHHHHHHHHh---CCeEEEEcCCCCCcchhhcCcchhHHHHHHHHHHHHHHHHHHHcCCChhhEEEECC
Confidence 64 3322 134556666664 22232222211 1111 122 45555666666543 45679999999
Q ss_pred CCCCCCCHhHHHHHHHHHH
Q 024250 238 CGLKTRKYTEVKPALSNMV 256 (270)
Q Consensus 238 Cgl~~~~~~~a~~kL~~l~ 256 (270)
.||+- +.+..++-|+.+.
T Consensus 180 ~Gf~k-~~~~n~~ll~~l~ 197 (280)
T 1eye_A 180 LGFAK-TAQHNWAILHALP 197 (280)
T ss_dssp TTSSC-CHHHHHHHHHTHH
T ss_pred CCccc-CHHHHHHHHHHHH
Confidence 99875 5664444444443
No 21
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=94.87 E-value=0.24 Score=41.74 Aligned_cols=67 Identities=19% Similarity=0.326 Sum_probs=40.5
Q ss_pred HHHHHHHHHcCCCEEEecc------CccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHHHHH
Q 024250 93 KDEVEDLEKAGINVIQIDE------AALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSII 166 (270)
Q Consensus 93 ~~~~~~l~~~G~~~IQiDE------P~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~~l~ 166 (270)
.++++.+.+.|++|+|+|. |.++.+ + .++..+++. ...-+|+.-.|....++.+.
T Consensus 29 ~~~i~~~~~~gad~lhvDvmDG~fvpn~t~G-------~-----~~v~~lr~~-------~~~DvhLMv~~p~~~i~~~~ 89 (237)
T 3cu2_A 29 NEEVTTLLENQINVLHFDIADGQFSSLFTVG-------A-----IGIKYFPTH-------CFKDVHLMVRNQLEVAKAVV 89 (237)
T ss_dssp HHHHHHHHHTTCCEEEEEEEBSSSSSCBCBC-------T-----HHHHTSCTT-------SEEEEEEECSCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEEecCccccchhhh-------H-----HHHHHHhhh-------CCCCeEEEEECHHHHHHHHH
Confidence 3446777789999999996 333321 1 112222222 11256775345556788999
Q ss_pred hCCCCEEEEEcc
Q 024250 167 DMDADVITIENS 178 (270)
Q Consensus 167 ~~~vd~l~ld~~ 178 (270)
++++|.+.+=..
T Consensus 90 ~aGAd~itvH~e 101 (237)
T 3cu2_A 90 ANGANLVTLQLE 101 (237)
T ss_dssp HTTCSEEEEETT
T ss_pred HcCCCEEEEecC
Confidence 999999665553
No 22
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=94.11 E-value=0.6 Score=39.03 Aligned_cols=141 Identities=16% Similarity=0.198 Sum_probs=72.6
Q ss_pred HHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHHHHHhCCCC
Q 024250 92 IKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDAD 171 (270)
Q Consensus 92 ~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~~l~~~~vd 171 (270)
+.++++.+ ++|++|+++|--.-......+- . ..+++.+++..+ .++-+|.=--|....++.+.++++|
T Consensus 15 l~~~i~~~-~~gad~lHvDvmDG~fvpn~t~-G-----~~~v~~lr~~~~-----~~~dvhLmv~dp~~~i~~~~~aGAd 82 (231)
T 3ctl_A 15 FKEQIEFI-DSHADYFHIDIMDGHFVPNLTL-S-----PFFVSQVKKLAT-----KPLDCHLMVTRPQDYIAQLARAGAD 82 (231)
T ss_dssp HHHHHHHH-HTTCSCEEEEEECSSSSSCCCB-C-----HHHHHHHHTTCC-----SCEEEEEESSCGGGTHHHHHHHTCS
T ss_pred HHHHHHHH-HcCCCEEEEEEEeCccCccchh-c-----HHHHHHHHhccC-----CcEEEEEEecCHHHHHHHHHHcCCC
Confidence 34567778 8999999999421111010110 1 124455554421 2345564333655567899999999
Q ss_pred EEEEEccC-C-C-chhHHHhhhcccCCCeeeceEecCCCCCCCCHHHHHHHHHHHhccccCCceE---ecCCCCCCCCCH
Q 024250 172 VITIENSR-S-D-EKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILW---VNPDCGLKTRKY 245 (270)
Q Consensus 172 ~l~ld~~~-~-~-~~~l~~l~~~~~~~~~l~~GvVd~~~~~~e~~e~v~~~i~~~~~~~~~~~l~---vsp~Cgl~~~~~ 245 (270)
.+++=... . + ...++.+++ .|..+++-+ ++.++ .+. ++..++.+ +.++ +.|+.|=..+ .
T Consensus 83 ~itvh~Ea~~~~~~~~i~~i~~---~G~k~gv~l-np~tp-~~~-------~~~~l~~~--D~VlvmsV~pGfggQ~f-~ 147 (231)
T 3ctl_A 83 FITLHPETINGQAFRLIDEIRR---HDMKVGLIL-NPETP-VEA-------MKYYIHKA--DKITVMTVDPGFAGQPF-I 147 (231)
T ss_dssp EEEECGGGCTTTHHHHHHHHHH---TTCEEEEEE-CTTCC-GGG-------GTTTGGGC--SEEEEESSCTTCSSCCC-C
T ss_pred EEEECcccCCccHHHHHHHHHH---cCCeEEEEE-ECCCc-HHH-------HHHHHhcC--CEEEEeeeccCcCCccc-c
Confidence 99876543 2 2 233444554 355555543 44332 122 22222222 4443 5565553333 3
Q ss_pred hHHHHHHHHHHHHH
Q 024250 246 TEVKPALSNMVAAA 259 (270)
Q Consensus 246 ~~a~~kL~~l~~~a 259 (270)
....+|++.+.+..
T Consensus 148 ~~~l~kI~~lr~~~ 161 (231)
T 3ctl_A 148 PEMLDKLAELKAWR 161 (231)
T ss_dssp TTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 34567777776554
No 23
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=93.77 E-value=1.3 Score=37.42 Aligned_cols=144 Identities=14% Similarity=0.189 Sum_probs=74.3
Q ss_pred HHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHHHHHhCCCC
Q 024250 92 IKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDAD 171 (270)
Q Consensus 92 ~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~~l~~~~vd 171 (270)
+.++++.+.++|++|+++|=-.-......+- . ..+++.+++....+ .+-+|.---|....++.+.++++|
T Consensus 42 L~~~i~~l~~~G~d~lHvDVmDg~FVpnit~-G-----~~~v~~lr~~~p~~----~ldvHLmv~~p~~~i~~~~~aGAd 111 (246)
T 3inp_A 42 LGDDVKAVLAAGADNIHFDVMDNHYVPNLTF-G-----PMVLKALRDYGITA----GMDVHLMVKPVDALIESFAKAGAT 111 (246)
T ss_dssp HHHHHHHHHHTTCCCEEEEEEBSSSSSCBCC-C-----HHHHHHHHHHTCCS----CEEEEEECSSCHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHcCCCEEEEEecCCCcCcchhc-C-----HHHHHHHHHhCCCC----eEEEEEeeCCHHHHHHHHHHcCCC
Confidence 3456777888999999998533221111111 2 23456676664222 234444334666678899999999
Q ss_pred EEEEEccCC-C-chhHHHhhhcccCCCeeeceEecCCCCCCCCHHHHHHHHHHHhccccCCceEe-cCCCCCCCCC-HhH
Q 024250 172 VITIENSRS-D-EKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWV-NPDCGLKTRK-YTE 247 (270)
Q Consensus 172 ~l~ld~~~~-~-~~~l~~l~~~~~~~~~l~~GvVd~~~~~~e~~e~v~~~i~~~~~~~~~~~l~v-sp~Cgl~~~~-~~~ 247 (270)
.+++=.... + .+.++.+++ .|..+++- +++.++ .+..+.+ ++.+ +-+++ |=.-||+..+ ...
T Consensus 112 ~itvH~Ea~~~~~~~i~~ir~---~G~k~Gva-lnp~Tp-~e~l~~~-------l~~v--D~VlvMsV~PGfgGQ~fi~~ 177 (246)
T 3inp_A 112 SIVFHPEASEHIDRSLQLIKS---FGIQAGLA-LNPATG-IDCLKYV-------ESNI--DRVLIMSVNPGFGGQKFIPA 177 (246)
T ss_dssp EEEECGGGCSCHHHHHHHHHT---TTSEEEEE-ECTTCC-SGGGTTT-------GGGC--SEEEEECSCTTC--CCCCTT
T ss_pred EEEEccccchhHHHHHHHHHH---cCCeEEEE-ecCCCC-HHHHHHH-------HhcC--CEEEEeeecCCCCCcccchH
Confidence 999976432 2 234555554 35555442 444332 2222222 3222 34433 2223444422 133
Q ss_pred HHHHHHHHHHHH
Q 024250 248 VKPALSNMVAAA 259 (270)
Q Consensus 248 a~~kL~~l~~~a 259 (270)
..+|++.+.+..
T Consensus 178 ~l~KI~~lr~~~ 189 (246)
T 3inp_A 178 MLDKAKEISKWI 189 (246)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 457777766544
No 24
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=93.48 E-value=0.28 Score=40.92 Aligned_cols=74 Identities=16% Similarity=0.245 Sum_probs=42.8
Q ss_pred HHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHHHHHhCCCCEE
Q 024250 94 DEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVI 173 (270)
Q Consensus 94 ~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~~l~~~~vd~l 173 (270)
++++.+.+.|+++||+|...-......+. .+ .....+++.++ .++.+|.---|....++.+.++++|++
T Consensus 21 ~~i~~~~~~Gad~ihldi~DG~fvp~~~~-g~-----~~v~~lr~~~~-----~~~~vhlmv~dp~~~i~~~~~aGadgv 89 (230)
T 1tqj_A 21 EEIKAVDEAGADWIHVDVMDGRFVPNITI-GP-----LIVDAIRPLTK-----KTLDVHLMIVEPEKYVEDFAKAGADII 89 (230)
T ss_dssp HHHHHHHHTTCSEEEEEEEBSSSSSCBCB-CH-----HHHHHHGGGCC-----SEEEEEEESSSGGGTHHHHHHHTCSEE
T ss_pred HHHHHHHHcCCCEEEEEEEecCCCcchhh-hH-----HHHHHHHhhcC-----CcEEEEEEccCHHHHHHHHHHcCCCEE
Confidence 45667778899999999832111111110 11 22334443321 345666543454445788999999999
Q ss_pred EEEcc
Q 024250 174 TIENS 178 (270)
Q Consensus 174 ~ld~~ 178 (270)
++=..
T Consensus 90 ~vh~e 94 (230)
T 1tqj_A 90 SVHVE 94 (230)
T ss_dssp EEECS
T ss_pred EECcc
Confidence 77654
No 25
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=92.89 E-value=2.1 Score=35.50 Aligned_cols=96 Identities=15% Similarity=0.133 Sum_probs=54.4
Q ss_pred HHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHh-cCCCCCceEEEeeccCCchhHHHHHHhCCC
Q 024250 92 IKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITN-CGVQDTTQIHTHMCYSNFNDIIHSIIDMDA 170 (270)
Q Consensus 92 ~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~lH~c~g~~~~~~~~l~~~~v 170 (270)
+.++++.+.++|++|+++|=-.-......+ .. ..+++.+++.+ ..++ ..+++++. |....++.+.++++
T Consensus 19 l~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~-~G-----~~~v~~ir~~~~~~~~--~dvhLmv~--~p~~~i~~~~~aGa 88 (228)
T 3ovp_A 19 LGAECLRMLDSGADYLHLDVMDGHFVPNIT-FG-----HPVVESLRKQLGQDPF--FDMHMMVS--KPEQWVKPMAVAGA 88 (228)
T ss_dssp HHHHHHHHHHTTCSCEEEEEEBSSSSSCBC-BC-----HHHHHHHHHHHCSSSC--EEEEEECS--CGGGGHHHHHHHTC
T ss_pred HHHHHHHHHHcCCCEEEEEecCCCcCcccc-cC-----HHHHHHHHHhhCCCCc--EEEEEEeC--CHHHHHHHHHHcCC
Confidence 445677788999999999743221111111 12 22455666654 3332 34455543 55566888999999
Q ss_pred CEEEEEccCC-C-chhHHHhhhcccCCCeeec
Q 024250 171 DVITIENSRS-D-EKLLSVFREGVKYGAGIGP 200 (270)
Q Consensus 171 d~l~ld~~~~-~-~~~l~~l~~~~~~~~~l~~ 200 (270)
|.+++=.... + .+.++.+++. |..+++
T Consensus 89 d~itvH~Ea~~~~~~~i~~i~~~---G~k~gv 117 (228)
T 3ovp_A 89 NQYTFHLEATENPGALIKDIREN---GMKVGL 117 (228)
T ss_dssp SEEEEEGGGCSCHHHHHHHHHHT---TCEEEE
T ss_pred CEEEEccCCchhHHHHHHHHHHc---CCCEEE
Confidence 9999976432 1 1344555543 444433
No 26
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=92.44 E-value=5.2 Score=35.00 Aligned_cols=153 Identities=14% Similarity=0.134 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHHHHHhCCC
Q 024250 91 AIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDA 170 (270)
Q Consensus 91 ~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~~l~~~~v 170 (270)
...+.++++.+.|+++|=|---+--.+ ..-+.++.++.+.+.++.+.+..+ ++.+.|-++ +. ++.+.-++.++
T Consensus 66 ~a~~~A~~~v~~GAdIIDIGgeSTrPG---~~v~~~eEl~Rv~pvI~~l~~~~~-~vpISIDT~--~~-~VaeaAl~aGa 138 (318)
T 2vp8_A 66 AARDAVHRAVADGADVIDVGGVKAGPG---ERVDVDTEITRLVPFIEWLRGAYP-DQLISVDTW--RA-QVAKAACAAGA 138 (318)
T ss_dssp HHHHHHHHHHHTTCSEEEEC-------------CHHHHHHHHHHHHHHHHHHST-TCEEEEECS--CH-HHHHHHHHHTC
T ss_pred HHHHHHHHHHHCCCCEEEECCCcCCCC---CCCCHHHHHHHHHHHHHHHHhhCC-CCeEEEeCC--CH-HHHHHHHHhCC
Confidence 334456778899999987763111101 011345567778777877665432 245666555 33 46777777888
Q ss_pred CEEEEEccC-CCchhHHHhhhcccCCCeeeceEec---CCCCC-CCC------------HHHHHHHHHHHhcc-ccCCce
Q 024250 171 DVITIENSR-SDEKLLSVFREGVKYGAGIGPGVYD---IHSPR-IPS------------TEEIADRINKMLAV-LETNIL 232 (270)
Q Consensus 171 d~l~ld~~~-~~~~~l~~l~~~~~~~~~l~~GvVd---~~~~~-~e~------------~e~v~~~i~~~~~~-~~~~~l 232 (270)
+.| -|... .+.+.++..+++ +-.+++=-.. .++.. ..+ .+.+.++++.+.+. ++.+++
T Consensus 139 ~iI-NDVsg~~d~~m~~vaa~~---g~~vVlmh~~G~~p~tmq~~~~y~~~~~dv~~ev~~~l~~~i~~a~~aGI~~~~I 214 (318)
T 2vp8_A 139 DLI-NDTWGGVDPAMPEVAAEF---GAGLVCAHTGGALPRTRPFRVSYGTTTRGVVDAVISQVTAAAERAVAAGVAREKV 214 (318)
T ss_dssp CEE-EETTSSSSTTHHHHHHHH---TCEEEEECC-------------CCSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGE
T ss_pred CEE-EECCCCCchHHHHHHHHh---CCCEEEECCCCCCccccccccccccccccHHHHHHHHHHHHHHHHHHcCCChhhE
Confidence 855 34322 234556666654 3223221111 11111 000 13444455555442 345799
Q ss_pred EecCCCCCCCCCHhHHHHHHHHHHHH
Q 024250 233 WVNPDCGLKTRKYTEVKPALSNMVAA 258 (270)
Q Consensus 233 ~vsp~Cgl~~~~~~~a~~kL~~l~~~ 258 (270)
++.|+.||+- +.+ ++++.|...
T Consensus 215 ilDPG~GF~K-t~~---~nl~ll~~l 236 (318)
T 2vp8_A 215 LIDPAHDFGK-NTF---HGLLLLRHV 236 (318)
T ss_dssp EEETTTTCCT-TSH---HHHHHHHTH
T ss_pred EEcCCCCccc-CHH---HHHHHHHHH
Confidence 9999999965 555 444444443
No 27
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=92.34 E-value=1.1 Score=42.30 Aligned_cols=66 Identities=17% Similarity=0.280 Sum_probs=41.3
Q ss_pred HHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHHHHHhCCCCEEE
Q 024250 95 EVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVIT 174 (270)
Q Consensus 95 ~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~~l~~~~vd~l~ 174 (270)
.++++.+.|+++||+.|+.+.. .++.+.+. .+..+++... ++++|| +++ +...++++|++|
T Consensus 30 ~ve~al~~Gv~~vQlR~K~~~~---------~~~~~~a~-~l~~l~~~~~--v~liIN---D~~----dlA~~~gAdGVH 90 (540)
T 3nl6_A 30 QVEAGLQNGVTLVQIREKDADT---------KFFIEEAL-QIKELCHAHN--VPLIIN---DRI----DVAMAIGADGIH 90 (540)
T ss_dssp HHHHHHHTTCSEEEECCSSSCT---------THHHHHHH-HHHHHHHHTT--CCEEEC---SCS----HHHHHTTCSEEE
T ss_pred HHHHHHHCCCCEEEEecCCCCH---------HHHHHHHH-HHHHHHHhcC--CEEEEe---CcH----HHHHHcCCCEEE
Confidence 3455567899999999997652 12333333 3333333332 456776 333 567889999999
Q ss_pred EEccC
Q 024250 175 IENSR 179 (270)
Q Consensus 175 ld~~~ 179 (270)
+....
T Consensus 91 Lgq~d 95 (540)
T 3nl6_A 91 VGQDD 95 (540)
T ss_dssp ECTTS
T ss_pred EChhh
Confidence 98654
No 28
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=92.03 E-value=4.4 Score=34.58 Aligned_cols=146 Identities=8% Similarity=0.018 Sum_probs=76.6
Q ss_pred HHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHHHHHhC--CC
Q 024250 93 KDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDM--DA 170 (270)
Q Consensus 93 ~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~~l~~~--~v 170 (270)
.+.++++.+.|+++|-|-=-+ .. .+..+.+.++++.+.+..+ +++.+-++ +. ++++.-++. +.
T Consensus 37 ~~~a~~~v~~GAdiIDIg~~s-------~~---~eE~~rv~~vi~~l~~~~~--~pisIDT~--~~-~v~~aal~a~~Ga 101 (271)
T 2yci_X 37 QEWARRQAEKGAHYLDVNTGP-------TA---DDPVRVMEWLVKTIQEVVD--LPCCLDST--NP-DAIEAGLKVHRGH 101 (271)
T ss_dssp HHHHHHHHHTTCSEEEEECCS-------CS---SCHHHHHHHHHHHHHHHCC--CCEEEECS--CH-HHHHHHHHHCCSC
T ss_pred HHHHHHHHHCCCCEEEEcCCc-------Cc---hhHHHHHHHHHHHHHHhCC--CeEEEeCC--CH-HHHHHHHHhCCCC
Confidence 334566778999998776322 11 1124555566665544332 45677666 33 456666666 77
Q ss_pred CEEE-EEccCCC--chhHHHhhhcccCCCeeeceEecCCCCCCCCHHHH----HHHHHHHhcc-ccCCceEecCCCCCCC
Q 024250 171 DVIT-IENSRSD--EKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEI----ADRINKMLAV-LETNILWVNPDCGLKT 242 (270)
Q Consensus 171 d~l~-ld~~~~~--~~~l~~l~~~~~~~~~l~~GvVd~~~~~~e~~e~v----~~~i~~~~~~-~~~~~l~vsp~Cgl~~ 242 (270)
+.+. +-... + .+.+...+++ +-.+++=-.|.+.. -.|.+++ .++++.+.+. ++++++++.|.+|+-.
T Consensus 102 ~iINdvs~~~-d~~~~~~~~~a~~---~~~vv~m~~d~~G~-p~t~~~~~~~l~~~~~~a~~~Gi~~~~IilDPg~gfig 176 (271)
T 2yci_X 102 AMINSTSADQ-WKMDIFFPMAKKY---EAAIIGLTMNEKGV-PKDANDRSQLAMELVANADAHGIPMTELYIDPLILPVN 176 (271)
T ss_dssp CEEEEECSCH-HHHHHHHHHHHHH---TCEEEEESCBTTBC-CCSHHHHHHHHHHHHHHHHHTTCCGGGEEEECCCCCTT
T ss_pred CEEEECCCCc-cccHHHHHHHHHc---CCCEEEEecCCCCC-CCCHHHHHHHHHHHHHHHHHCCCCcccEEEecCCCccc
Confidence 7664 32211 2 2344444543 32222222221211 2344433 3444444432 3567899999999955
Q ss_pred CCHhHHHHHHHHHHHH
Q 024250 243 RKYTEVKPALSNMVAA 258 (270)
Q Consensus 243 ~~~~~a~~kL~~l~~~ 258 (270)
.+.+..++-|+.+.+.
T Consensus 177 k~~~~~~~~l~~l~~~ 192 (271)
T 2yci_X 177 VAQEHAVEVLETIRQI 192 (271)
T ss_dssp TSTHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHH
Confidence 5666555555555443
No 29
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=91.20 E-value=0.81 Score=38.16 Aligned_cols=95 Identities=14% Similarity=0.174 Sum_probs=47.5
Q ss_pred HHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHHHHHhCCCCE
Q 024250 93 KDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADV 172 (270)
Q Consensus 93 ~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~~l~~~~vd~ 172 (270)
.++++.+.++|++|+|+|--.-......+- . ..+++.+++.+. +..+.+|.---|....++.+.+ +|.
T Consensus 21 ~~~i~~~~~~g~d~iHvDvmDg~fvpn~t~-G-----~~~v~~lr~~~p----~~~~dvhLmv~dp~~~i~~~~~--Ad~ 88 (227)
T 1tqx_A 21 AEETQRMESLGAEWIHLDVMDMHFVPNLSF-G-----PPVINNLKKYTK----SIFFDVHLMVEYPEKYVPLLKT--SNQ 88 (227)
T ss_dssp HHHHHHHHHTTCSEEEEEEEBSSSSSCBCC-C-----HHHHHHHGGGCS----SCEEEEEEESSCGGGGGGGCTT--SSE
T ss_pred HHHHHHHHHcCCCEEEEEEEeCCcCcchhc-C-----HHHHHHHHHhCC----CCcEEEEEEEcCHHHHHHHHHh--CCE
Confidence 345667778999999999632221111110 1 123445554431 1345667654454444555656 666
Q ss_pred EEE--EccCCC-chhHH---HhhhcccCCCeeeceE
Q 024250 173 ITI--ENSRSD-EKLLS---VFREGVKYGAGIGPGV 202 (270)
Q Consensus 173 l~l--d~~~~~-~~~l~---~l~~~~~~~~~l~~Gv 202 (270)
+++ |....+ ...++ .+++ .|..+++-+
T Consensus 89 itvH~ea~~~~~~~~i~~~~~i~~---~G~k~gval 121 (227)
T 1tqx_A 89 LTFHFEALNEDTERCIQLAKEIRD---NNLWCGISI 121 (227)
T ss_dssp EEEEGGGGTTCHHHHHHHHHHHHT---TTCEEEEEE
T ss_pred EEEeecCCccCHHHHHHHHHHHHH---cCCeEEEEe
Confidence 654 443212 23445 5554 355555543
No 30
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=90.80 E-value=7.8 Score=33.80 Aligned_cols=152 Identities=12% Similarity=0.187 Sum_probs=78.2
Q ss_pred HHHHHHHHHHcCCCEEEeccCccccCCCC--CCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHHHHHhCC
Q 024250 92 IKDEVEDLEKAGINVIQIDEAALREGLPL--RKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMD 169 (270)
Q Consensus 92 ~~~~~~~l~~~G~~~IQiDEP~l~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~~l~~~~ 169 (270)
..+.++++.+.|+++|=|--.+-..+... .+-+.++..+++.++++.+.+.. ++++.+=++ +. ++++.-++.+
T Consensus 51 al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~--~vpISIDT~--~~-~Va~aAl~aG 125 (314)
T 3tr9_A 51 ALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRF--PQLISVDTS--RP-RVMREAVNTG 125 (314)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHC--CSEEEEECS--CH-HHHHHHHHHT
T ss_pred HHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhC--CCeEEEeCC--CH-HHHHHHHHcC
Confidence 34446778889999977762211111000 01123455667777777665433 255666555 33 4667777778
Q ss_pred CCEEEEEccC-CCchhHHHhhhcccCCCeeeceEecCC-CCC-C----------CCHHHHHHHHHHHhcc-ccCCceEec
Q 024250 170 ADVITIENSR-SDEKLLSVFREGVKYGAGIGPGVYDIH-SPR-I----------PSTEEIADRINKMLAV-LETNILWVN 235 (270)
Q Consensus 170 vd~l~ld~~~-~~~~~l~~l~~~~~~~~~l~~GvVd~~-~~~-~----------e~~e~v~~~i~~~~~~-~~~~~l~vs 235 (270)
++.|. |... .+.+.+...+++ +-.+++ ...+ .+. . +-.+.+.++++.+.+. ++.+++++.
T Consensus 126 a~iIN-DVsg~~~~~m~~v~a~~---g~~vVl--Mh~~G~P~tmq~~~~ydvv~ev~~~l~~~i~~a~~~GI~~~~IilD 199 (314)
T 3tr9_A 126 ADMIN-DQRALQLDDALTTVSAL---KTPVCL--MHFPSETRKPGSTTHFYFLQSVKKELQESIQRCKKAGISEDRIIID 199 (314)
T ss_dssp CCEEE-ETTTTCSTTHHHHHHHH---TCCEEE--ECCCCTTCCTTSSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred CCEEE-ECCCCCchHHHHHHHHh---CCeEEE--ECCCCCCcccccccccchHHHHHHHHHHHHHHHHHcCCCHhHEEEe
Confidence 87553 4322 223455566654 222332 2222 111 1 1134455555555543 345799999
Q ss_pred CCCC---CCCCCHhHHHHHHHHH
Q 024250 236 PDCG---LKTRKYTEVKPALSNM 255 (270)
Q Consensus 236 p~Cg---l~~~~~~~a~~kL~~l 255 (270)
|+.| |+ .+.+..++-|+.+
T Consensus 200 PG~G~~~F~-Kt~~~n~~lL~~l 221 (314)
T 3tr9_A 200 PGFGQGNYG-KNVSENFYLLNKL 221 (314)
T ss_dssp CCCCSGGGC-CCHHHHHHHHHTT
T ss_pred CCCCchhhc-CCHHHHHHHHHHH
Confidence 9888 65 3555333434333
No 31
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=89.63 E-value=3.5 Score=34.56 Aligned_cols=69 Identities=13% Similarity=0.085 Sum_probs=40.1
Q ss_pred HHHHHHcCCCEEEeccCccc-----cCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHHHHHhCCC
Q 024250 96 VEDLEKAGINVIQIDEAALR-----EGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDA 170 (270)
Q Consensus 96 ~~~l~~~G~~~IQiDEP~l~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~~l~~~~v 170 (270)
++++.+.|+++||+-|+... ..+ +..++.+.+. .+..++... +++++|| +++ +...++++
T Consensus 49 ~~~al~~Gv~~vqlR~K~~~~~~~~~~l-----~~~~~~~~a~-~l~~l~~~~--~~~liIn---d~~----~lA~~~gA 113 (243)
T 3o63_A 49 AEAALAGGVDIIQLRDKGSPGELRFGPL-----QARDELAACE-ILADAAHRY--GALFAVN---DRA----DIARAAGA 113 (243)
T ss_dssp HHHHHHTTCSEEEECCTTCHHHHHHCSC-----CHHHHHHHHH-HHHHHHHHT--TCEEEEE---SCH----HHHHHHTC
T ss_pred HHHHHHCCCCEEEEccCCCCccccccCC-----CHHHHHHHHH-HHHHHHHhh--CCEEEEe---CHH----HHHHHhCC
Confidence 34455789999999998732 001 1223344433 333333333 2456676 333 45678899
Q ss_pred CEEEEEccC
Q 024250 171 DVITIENSR 179 (270)
Q Consensus 171 d~l~ld~~~ 179 (270)
|++++....
T Consensus 114 dGVHLg~~d 122 (243)
T 3o63_A 114 DVLHLGQRD 122 (243)
T ss_dssp SEEEECTTS
T ss_pred CEEEecCCc
Confidence 999998654
No 32
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=88.51 E-value=11 Score=32.42 Aligned_cols=149 Identities=13% Similarity=0.174 Sum_probs=81.7
Q ss_pred HHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHHHHHhCCCCE
Q 024250 93 KDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADV 172 (270)
Q Consensus 93 ~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~~l~~~~vd~ 172 (270)
.+.++++.+.|+++|=|-=-+-..+. .+-+.++..+.+.+.++.+.+. ++++.+-++ +. ++.+.-++.+++.
T Consensus 49 ~~~a~~~v~~GAdiIDIGgeSTrPga--~~v~~~eE~~Rv~pvi~~l~~~---~vpiSIDT~--~~-~Va~aAl~aGa~i 120 (294)
T 2y5s_A 49 LRRAERMIAEGADLLDIGGESTRPGA--PPVPLDEELARVIPLVEALRPL---NVPLSIDTY--KP-AVMRAALAAGADL 120 (294)
T ss_dssp HHHHHHHHHTTCSEEEEESSCCSTTC--CCCCHHHHHHHHHHHHHHHGGG---CSCEEEECC--CH-HHHHHHHHHTCSE
T ss_pred HHHHHHHHHCCCCEEEECCCcCCCCC--CCCCHHHHHHHHHHHHHHHhhC---CCeEEEECC--CH-HHHHHHHHcCCCE
Confidence 34567788999999777642211111 1114466788888898887653 355666555 33 4667777778877
Q ss_pred EEEEccC-CCchhHHHhhhcccCCCeeeceEec--CCC-----CCCCC-----HHHHHHHHHHHhcc-ccCCceEecCCC
Q 024250 173 ITIENSR-SDEKLLSVFREGVKYGAGIGPGVYD--IHS-----PRIPS-----TEEIADRINKMLAV-LETNILWVNPDC 238 (270)
Q Consensus 173 l~ld~~~-~~~~~l~~l~~~~~~~~~l~~GvVd--~~~-----~~~e~-----~e~v~~~i~~~~~~-~~~~~l~vsp~C 238 (270)
|. |... .+.+.+...+++ +-.+++--.. +++ +.-++ .+.+.++++.+.+. ++++++++.|+.
T Consensus 121 IN-dVsg~~d~~m~~~~a~~---~~~vVlmh~~G~p~tm~~~~~~y~dv~~ev~~~l~~~i~~a~~~Gi~~~~IilDPG~ 196 (294)
T 2y5s_A 121 IN-DIWGFRQPGAIDAVRDG---NSGLCAMHMLGEPQTMQVGEPDYGDVVTDVRDFLAARAQALRDAGVAAERICVDPGF 196 (294)
T ss_dssp EE-ETTTTCSTTHHHHHSSS---SCEEEEECCCEETTTTEECCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCT
T ss_pred EE-ECCCCCchHHHHHHHHh---CCCEEEECCCCCCccccccCCccccHHHHHHHHHHHHHHHHHHcCCChhhEEEeCCC
Confidence 63 3322 134455555543 3222221111 111 11123 34555566666543 346799999999
Q ss_pred CCCCCCH-hHHHHHHHHHHH
Q 024250 239 GLKTRKY-TEVKPALSNMVA 257 (270)
Q Consensus 239 gl~~~~~-~~a~~kL~~l~~ 257 (270)
||+- +. + +++..|..
T Consensus 197 Gf~k-t~~~---~n~~ll~~ 212 (294)
T 2y5s_A 197 GFGK-AVVD---DNYALLAA 212 (294)
T ss_dssp TSSS-CTTH---HHHHHHHT
T ss_pred cccc-cchH---HHHHHHHH
Confidence 9864 44 5 44444443
No 33
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=87.14 E-value=13 Score=32.04 Aligned_cols=170 Identities=9% Similarity=0.065 Sum_probs=87.4
Q ss_pred ccchHHHHHhhhccCCCCcHHHHHHHHHHHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhc
Q 024250 62 MLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNC 141 (270)
Q Consensus 62 ~l~GP~Tla~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 141 (270)
.++||=+|.......+ . +...+.++++.+.|+++|=|-=. . ...+..+..+++++.+..+.+
T Consensus 20 NvTg~~sf~~~~~~~~---~--------~~a~~~A~~~v~~GAdiIDIg~g-----~--~~v~~~eem~rvv~~i~~~~~ 81 (300)
T 3k13_A 20 NVAGSRKFLRLVNEKK---Y--------DEALSIARQQVEDGALVIDVNMD-----D--GLLDARTEMTTFLNLIMSEPE 81 (300)
T ss_dssp ETTTCHHHHHHHHTTC---H--------HHHHHHHHHHHHTTCSEEEEECC-----C--TTSCHHHHHHHHHHHHHTCHH
T ss_pred cCCCCHHHHHHHhcCC---H--------HHHHHHHHHHHHCCCCEEEECCC-----C--CCCCHHHHHHHHHHHHHHhhh
Confidence 5667766665544322 1 23344566777899998665421 1 111334456666776653211
Q ss_pred CCCCCceEEEeeccCCchhHHHHHHh--CCCCEEEEEccCC--Cc---hhHHHhhhcccCCCeeeceEecCCCC--CCCC
Q 024250 142 GVQDTTQIHTHMCYSNFNDIIHSIID--MDADVITIENSRS--DE---KLLSVFREGVKYGAGIGPGVYDIHSP--RIPS 212 (270)
Q Consensus 142 ~~~~~~~i~lH~c~g~~~~~~~~l~~--~~vd~l~ld~~~~--~~---~~l~~l~~~~~~~~~l~~GvVd~~~~--~~e~ 212 (270)
.. ++++.+-++ ++ ++++.-++ .+.+.+. |.... +. +.+...+++ +-.+++--.|.+.. ..+.
T Consensus 82 ~~--~vpisIDT~--~~-~V~eaaL~~~~Ga~iIN-dIs~~~~d~~~~~~~~l~a~~---ga~vV~mh~d~~G~p~t~~~ 152 (300)
T 3k13_A 82 IA--RVPVMIDSS--KW-EVIEAGLKCLQGKSIVN-SISLKEGEEVFLEHARIIKQY---GAATVVMAFDEKGQADTAAR 152 (300)
T ss_dssp HH--TSCEEEECS--CH-HHHHHHHHHCSSCCEEE-EECSTTCHHHHHHHHHHHHHH---TCEEEEESEETTEECCSHHH
T ss_pred cC--CCeEEEeCC--CH-HHHHHHHHhcCCCCEEE-eCCcccCChhHHHHHHHHHHh---CCeEEEEeeCCCCCCCCHHH
Confidence 11 245666665 34 45666666 5766542 32221 12 234455554 33444444432211 1222
Q ss_pred HHHHHHHHHHHh-cc--ccCCceEecCCCC-CCCCCHhH---HHHHHHHHHHH
Q 024250 213 TEEIADRINKML-AV--LETNILWVNPDCG-LKTRKYTE---VKPALSNMVAA 258 (270)
Q Consensus 213 ~e~v~~~i~~~~-~~--~~~~~l~vsp~Cg-l~~~~~~~---a~~kL~~l~~~ 258 (270)
.-++.+++.+++ .. ++++++++.|..| |+.-..+. .++-|+.+.+.
T Consensus 153 ~~~i~~r~~~~~~~~~Gi~~~~IilDPgig~~gk~~~~~~~~~~~~l~~l~~l 205 (300)
T 3k13_A 153 KIEVCERAYRLLVDKVGFNPHDIIFDPNVLAVATGIEEHNNYAVDFIEATGWI 205 (300)
T ss_dssp HHHHHHHHHHHHHHHTCCCGGGEEEECCCCCCSSSCGGGTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHEEEeCCCCccCCChHHhhHHHHHHHHHHHHH
Confidence 335666676664 33 4568999999997 76543332 45555555443
No 34
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=86.97 E-value=8 Score=31.69 Aligned_cols=73 Identities=15% Similarity=0.175 Sum_probs=40.1
Q ss_pred HHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHHHHHhCCCCEE
Q 024250 94 DEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVI 173 (270)
Q Consensus 94 ~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~~l~~~~vd~l 173 (270)
+.++.+.++|+++||+|.--....... ...+ .....+++.+ + ..+.+|.---|....++.+.++++|++
T Consensus 23 ~~i~~~~~~Gad~i~l~i~Dg~fv~~~-~~~~-----~~~~~lr~~~---~--~~~~v~lmv~d~~~~i~~~~~agad~v 91 (228)
T 1h1y_A 23 AEADRMVRLGADWLHMDIMDGHFVPNL-TIGA-----PVIQSLRKHT---K--AYLDCHLMVTNPSDYVEPLAKAGASGF 91 (228)
T ss_dssp HHHHHHHHTTCSEEEEEEEBSSSSSCB-CBCH-----HHHHHHHTTC---C--SEEEEEEESSCGGGGHHHHHHHTCSEE
T ss_pred HHHHHHHHcCCCEEEEEEecCCcCcch-hhCH-----HHHHHHHhhc---C--CcEEEEEEecCHHHHHHHHHHcCCCEE
Confidence 456667789999999996322111101 1011 1223343322 1 234556543344445788888999999
Q ss_pred EEEc
Q 024250 174 TIEN 177 (270)
Q Consensus 174 ~ld~ 177 (270)
.+=.
T Consensus 92 ~vH~ 95 (228)
T 1h1y_A 92 TFHI 95 (228)
T ss_dssp EEEG
T ss_pred EECC
Confidence 5554
No 35
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=86.68 E-value=10 Score=34.68 Aligned_cols=153 Identities=9% Similarity=0.078 Sum_probs=74.3
Q ss_pred HHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhc---CCCCCceEEEeeccCCchhHHHHHHh-
Q 024250 92 IKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNC---GVQDTTQIHTHMCYSNFNDIIHSIID- 167 (270)
Q Consensus 92 ~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~lH~c~g~~~~~~~~l~~- 167 (270)
..+.++++.+.||++|=|--.+-..+. ..-+.++..+++.++++.+.+ ..+.++++.+-|+ +. ++++..++
T Consensus 214 al~~A~~mv~~GAdIIDIGgeSTrPGa--~~Vs~~EE~~Rv~pvI~~l~~~~~~~~~~vpISIDT~--~~-~VaeaAL~~ 288 (442)
T 3mcm_A 214 RKLNLDELIQSGAEIIDIGAESTKPDA--KPISIEEEFNKLNEFLEYFKSQLANLIYKPLVSIDTR--KL-EVMQKILAK 288 (442)
T ss_dssp HHHHHHHHHHHTCSEEEEECCCCCC------CCHHHHHHHHHHHHHHHHHHTTTCSSCCEEEEECC--CH-HHHHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEECCCCCCCCC--CCCCHHHHHHHHHHHHHHHHhhccccCCCCeEEEeCC--CH-HHHHHHHhh
Confidence 344567788889999877622111110 011345567778777777654 2211355666555 23 46666677
Q ss_pred -CCCCEEEEEccC-CCchhHHHhhhcccCCCeeeceEecCCCC------------CCCCHHHHHHHHHHHhcc-ccCCce
Q 024250 168 -MDADVITIENSR-SDEKLLSVFREGVKYGAGIGPGVYDIHSP------------RIPSTEEIADRINKMLAV-LETNIL 232 (270)
Q Consensus 168 -~~vd~l~ld~~~-~~~~~l~~l~~~~~~~~~l~~GvVd~~~~------------~~e~~e~v~~~i~~~~~~-~~~~~l 232 (270)
.+++..--|... .+.+.++..+++ +-.+++ ...+.. ..+-.+.+.++++.+.+. ++.+++
T Consensus 289 ~aGa~i~INDVsg~~d~~m~~v~a~~---g~~vVl--Mh~~G~P~tmq~~~y~dvv~ev~~~l~~~i~~a~~aGI~~~~I 363 (442)
T 3mcm_A 289 HHDIIWMINDVECNNIEQKAQLIAKY---NKKYVI--IHNLGITDRNQYLDKENAIDNVCDYIEQKKQILLKHGIAQQNI 363 (442)
T ss_dssp HGGGCCEEEECCCTTHHHHHHHHHHH---TCEEEE--ECC----------------CTHHHHHHHHHHHHHHHTCCGGGE
T ss_pred CCCCCEEEEcCCCCCChHHHHHHHHh---CCeEEE--ECCCCCCccccccCcccHHHHHHHHHHHHHHHHHHcCCCHHHE
Confidence 777761223222 233455566654 333332 222111 112245566667776653 456899
Q ss_pred EecCCCCCCCCCHhHHHHHHHHH
Q 024250 233 WVNPDCGLKTRKYTEVKPALSNM 255 (270)
Q Consensus 233 ~vsp~Cgl~~~~~~~a~~kL~~l 255 (270)
++.|+-||+ .+.+..++-|+.+
T Consensus 364 ilDPGiGF~-Kt~~~nl~lL~~l 385 (442)
T 3mcm_A 364 YFDIGFGFG-KKSDTARYLLENI 385 (442)
T ss_dssp EEECCCC-------------CCH
T ss_pred EEeCCCCCC-CCHHHHHHHHHHH
Confidence 999999885 3444333333333
No 36
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=86.35 E-value=15 Score=31.98 Aligned_cols=153 Identities=14% Similarity=0.177 Sum_probs=79.4
Q ss_pred HHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHHHHHhCCCC
Q 024250 92 IKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDAD 171 (270)
Q Consensus 92 ~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~~l~~~~vd 171 (270)
..+.++++.+.|+++|=|-=-+-..+. .+-+.++..+.+.++++.+.+.. ++++.|-|+ +. ++.+.-++.+++
T Consensus 35 a~~~a~~~v~~GAdIIDIGgeSTrPGa--~~v~~~eE~~Rv~pvI~~l~~~~--~vpiSIDT~--~~-~Va~aAl~aGa~ 107 (314)
T 2vef_A 35 ALQQARKLIAEGASMLDIGGESTRPGS--SYVEIEEEIQRVVPVIKAIRKES--DVLISIDTW--KS-QVAEAALAAGAD 107 (314)
T ss_dssp HHHHHHHHHHTTCSEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHC--CCEEEEECS--CH-HHHHHHHHTTCC
T ss_pred HHHHHHHHHHCCCCEEEECCCcCCCCC--CCCCHHHHHHHHHHHHHHHHhhC--CceEEEeCC--CH-HHHHHHHHcCCC
Confidence 344577888999999766531111000 00123456777788877765433 255666555 23 567777888887
Q ss_pred EEEEEccC--CCchhHHHhhhcccCCCeeeceEecC----CCC--------------CCCC--------HHH-----HHH
Q 024250 172 VITIENSR--SDEKLLSVFREGVKYGAGIGPGVYDI----HSP--------------RIPS--------TEE-----IAD 218 (270)
Q Consensus 172 ~l~ld~~~--~~~~~l~~l~~~~~~~~~l~~GvVd~----~~~--------------~~e~--------~e~-----v~~ 218 (270)
.|. |... .+.+.++..+++ +-.+++=-.++ .+. .... .++ +.+
T Consensus 108 iIN-DVsg~~~d~~m~~v~a~~---~~~vvlmh~~~~g~p~~~~~~~~~~~~~g~~~~~~~~~~y~d~~v~e~v~~~l~~ 183 (314)
T 2vef_A 108 LVN-DITGLMGDEKMPHVVAEA---RAQVVIMFNPVMARPQHPSSLIFPHFGFGQAFTEEELADFETLPIEELMEAFFER 183 (314)
T ss_dssp EEE-ETTTTCSCTTHHHHHHHH---TCEEEEECCHHHHCTTSTTTTTSCCCCC--CCCC--CHHHHHSCHHHHHHHHHHH
T ss_pred EEE-ECCCCCCChHHHHHHHHc---CCCEEEEecCCCCCCCCcccccccccccccccccccccccccchHHHHHHHHHHH
Confidence 774 3322 134455665654 22222211111 110 0000 333 334
Q ss_pred HHHHHhcc-ccCCceEecCCCCCCCCCHhHHHHHHHHHHHHH
Q 024250 219 RINKMLAV-LETNILWVNPDCGLKTRKYTEVKPALSNMVAAA 259 (270)
Q Consensus 219 ~i~~~~~~-~~~~~l~vsp~Cgl~~~~~~~a~~kL~~l~~~a 259 (270)
+++.+.+. ++.++++|.|+-||+- +.+ +++..+..+.
T Consensus 184 ~i~~a~~~GI~~~~IilDPGiGF~k-t~~---~nl~ll~~l~ 221 (314)
T 2vef_A 184 ALARAAEAGIAPENILLDPGIGFGL-TKK---ENLLLLRDLD 221 (314)
T ss_dssp HHHHHHHHTCCGGGEEEECCTTSSC-CHH---HHHHHHHTHH
T ss_pred HHHHHHHcCCChhhEEEeCCCCccc-chH---HHHHHHHHHH
Confidence 45555432 3458999999999865 444 4555554443
No 37
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=84.46 E-value=18 Score=30.76 Aligned_cols=148 Identities=14% Similarity=0.218 Sum_probs=84.4
Q ss_pred HHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHHHHHhCCCCEE
Q 024250 94 DEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVI 173 (270)
Q Consensus 94 ~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~~l~~~~vd~l 173 (270)
+.++++.+.|+++|=|=-=+--.+ ..+-+.+++++++.+.++.+.+ . ++.+.+-|+. . .+....++.+++.+
T Consensus 34 ~~a~~m~~~GAdiIDIGgeSTRPg--a~~vs~eeE~~Rv~pvi~~l~~-~--~v~iSIDT~~--~-~Va~~al~aGa~iI 105 (270)
T 4hb7_A 34 NRVKAMIDEGADIIDVGGVSTRPG--HEMVTLEEELNRVLPVVEAIVG-F--DVKISVDTFR--S-EVAEACLKLGVDMI 105 (270)
T ss_dssp HHHHHHHHTTCSEEEEESCCCSTT--CCCCCHHHHHHHHHHHHHHHTT-S--SSEEEEECSC--H-HHHHHHHHHTCCEE
T ss_pred HHHHHHHHCCCCEEEECCccCCCC--CCCCchHHHHHHHHHHHHHhhc-C--CCeEEEECCC--H-HHHHHHHHhcccee
Confidence 446778889999976632111100 1111456778888999988743 2 4677777773 2 46777889999987
Q ss_pred EEEccC--CCchhHHHhhhcccCCCeeeceEecCCCCCCCC-HHH----HHHHHHHHhcc-ccCCceEecCCCCCCCCCH
Q 024250 174 TIENSR--SDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPS-TEE----IADRINKMLAV-LETNILWVNPDCGLKTRKY 245 (270)
Q Consensus 174 ~ld~~~--~~~~~l~~l~~~~~~~~~l~~GvVd~~~~~~e~-~e~----v~~~i~~~~~~-~~~~~l~vsp~Cgl~~~~~ 245 (270)
. |... .+.+.++..+++ +-.+++=- ...++.-++ .++ +.++++.+.+. ++.+++++.|+-||+- +.
T Consensus 106 N-DVs~g~~d~~m~~~va~~---~~~~vlMH-~~~~p~~~~vv~ev~~~l~~~i~~a~~aGI~~~~IilDPGiGFgK-t~ 179 (270)
T 4hb7_A 106 N-DQWAGLYDHRMFQIVAKY---DAEIILMH-NGNGNRDEPVVEEMLTSLLAQAHQAKIAGIPSNKIWLDPGIGFAK-TR 179 (270)
T ss_dssp E-ETTTTSSCTHHHHHHHHT---TCEEEEEC-CCSSCCSSCHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSC-CH
T ss_pred c-cccccccchhHHHHHHHc---CCCeEEec-cccCCccccchhHHHHHHHHHHHHHHHcCCCCceEEEeCCCCccc-cc
Confidence 6 4322 245666777764 22222111 011222222 233 44455555442 4568999999999864 55
Q ss_pred hHHHHHHHHHHHH
Q 024250 246 TEVKPALSNMVAA 258 (270)
Q Consensus 246 ~~a~~kL~~l~~~ 258 (270)
+ ++++.|..+
T Consensus 180 ~---~N~~ll~~l 189 (270)
T 4hb7_A 180 N---EEAEVMARL 189 (270)
T ss_dssp H---HHHHHHTCH
T ss_pred c---cHHHHHhhH
Confidence 5 555555443
No 38
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=83.74 E-value=4.8 Score=32.92 Aligned_cols=71 Identities=14% Similarity=0.260 Sum_probs=42.0
Q ss_pred HHHHHHHHcCCCEEEecc---CccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHHHHHhCCC
Q 024250 94 DEVEDLEKAGINVIQIDE---AALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDA 170 (270)
Q Consensus 94 ~~~~~l~~~G~~~IQiDE---P~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~~l~~~~v 170 (270)
+.++.+.+.|+++||++. |.... +.. .+ +.++++.+..+ .++.+|+..-+..+.++.+.++++
T Consensus 27 ~~i~~~~~~G~d~i~l~~~dg~f~~~-~~~---~~--------~~i~~l~~~~~--~~~~v~l~vnd~~~~v~~~~~~Ga 92 (230)
T 1rpx_A 27 EQVKAIEQAGCDWIHVDVMDGRFVPN-ITI---GP--------LVVDSLRPITD--LPLDVHLMIVEPDQRVPDFIKAGA 92 (230)
T ss_dssp HHHHHHHHTTCCCEEEEEEBSSSSSC-BCC---CH--------HHHHHHGGGCC--SCEEEEEESSSHHHHHHHHHHTTC
T ss_pred HHHHHHHHCCCCEEEEeeccCCcccc-ccc---CH--------HHHHHHHhccC--CcEEEEEEecCHHHHHHHHHHcCC
Confidence 346667788999999974 33221 110 11 12222222221 346788876554446777899999
Q ss_pred CEEEEEcc
Q 024250 171 DVITIENS 178 (270)
Q Consensus 171 d~l~ld~~ 178 (270)
|++++-..
T Consensus 93 d~v~vh~~ 100 (230)
T 1rpx_A 93 DIVSVHCE 100 (230)
T ss_dssp SEEEEECS
T ss_pred CEEEEEec
Confidence 99987765
No 39
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=83.70 E-value=22 Score=33.48 Aligned_cols=169 Identities=14% Similarity=0.105 Sum_probs=97.4
Q ss_pred HHHHHHHhccCCCcccccchHHHHHhhhccCCCCcHHHHHHHHHHHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccH
Q 024250 46 FWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEH 125 (270)
Q Consensus 46 ~~~~~~~~~~~~~vK~~l~GP~Tla~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~ 125 (270)
..++.+++..+...-+.-.||+.-.. ..++.. -.+++.+.|++.++.|.+.|+|.+-+.= ++ +.
T Consensus 88 ~av~lAr~a~~~~~VAGsiGP~g~~~----~~~~~~--~~~e~~~~~~~qi~~l~~~gvD~l~~ET--~~--------~~ 151 (566)
T 1q7z_A 88 NAVRIARRAAGEKLVFGDIGPTGELP----YPLGST--LFEEFYENFRETVEIMVEEGVDGIIFET--FS--------DI 151 (566)
T ss_dssp HHHHHHHHHHTTSEEEEEECCCSCCB----TTTSSB--CHHHHHHHHHHHHHHHHHTTCSEEEEEE--EC--------CH
T ss_pred HHHHHHHHHHhCCeEEEeCCCcccCC----CCCCCC--CHHHHHHHHHHHHHHHHhCCCCEEEEec--cC--------CH
Confidence 33455555433213334467765322 112211 1366778999999999999999876652 11 11
Q ss_pred HHHHHHHHHHHHHHhcCCCCCceEEEeeccC---------CchhHHHHHHhCCCCEEEEEccCCCc---hhHHHhhhccc
Q 024250 126 AFYLDWAVHSFRITNCGVQDTTQIHTHMCYS---------NFNDIIHSIIDMDADVITIENSRSDE---KLLSVFREGVK 193 (270)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g---------~~~~~~~~l~~~~vd~l~ld~~~~~~---~~l~~l~~~~~ 193 (270)
.....+..++++...+ .++++..++. +..+.+..+...+++++++--..+.. ..++.+.+.
T Consensus 152 -~Ea~aa~~a~~~~~~~----~Pv~vS~t~~~~g~~~~G~~~~~~~~~l~~~~~~avG~NC~~gp~~~~~~l~~l~~~-- 224 (566)
T 1q7z_A 152 -LELKAAVLAAREVSRD----VFLIAHMTFDEKGRSLTGTDPANFAITFDELDIDALGINCSLGPEEILPIFQELSQY-- 224 (566)
T ss_dssp -HHHHHHHHHHHHHCSS----SCEEEEECCCTTSCCTTSCCHHHHHHHHHTSSCSEEEEESSSCHHHHHHHHHHHHHT--
T ss_pred -HHHHHHHHHHHHhCCC----CcEEEEEEEcCCCeeCCCCcHHHHHHHhhccCCCEEEEeCCCCHHHHHHHHHHHHhc--
Confidence 1234456666654333 3456665542 23367778888999999999754322 233444332
Q ss_pred CCCeeeceEe---------cCCCCCCCCHHHHHHHHHHHhccccCCceEecCCCCCCC
Q 024250 194 YGAGIGPGVY---------DIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKT 242 (270)
Q Consensus 194 ~~~~l~~GvV---------d~~~~~~e~~e~v~~~i~~~~~~~~~~~l~vsp~Cgl~~ 242 (270)
.+ ..+++- |+...|..+|++..+.+++..+. | --+|.--||..+
T Consensus 225 ~~--~p~~vyPNaG~p~~~~~~~~~~~~p~~~a~~~~~~~~~-G--~~iiGGCCGTtP 277 (566)
T 1q7z_A 225 TD--KFLVVEPNAGKPIVENGKTVYPLKPHDFAVHIDSYYEL-G--VNIFGGCCGTTP 277 (566)
T ss_dssp CC--SEEEEECCSSSCEEETTEEECCCCHHHHHTTHHHHHHT-T--CSEECCCTTCCH
T ss_pred CC--CEEEEEcCCCCCcccCCccccCCCHHHHHHHHHHHHHc-C--CcEEccccCCCH
Confidence 12 223332 44445678999988888876653 3 446888999764
No 40
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=83.56 E-value=16 Score=29.46 Aligned_cols=63 Identities=8% Similarity=0.061 Sum_probs=36.4
Q ss_pred HHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHHHHHhCCCCEEEE
Q 024250 96 VEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITI 175 (270)
Q Consensus 96 ~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~~l~~~~vd~l~l 175 (270)
++++.+.|+++||++++.++ ...+.+. ...+.... .+. ..+.++ + .++.+.++++|++++
T Consensus 35 ~~~~~~~G~~~v~lr~~~~~---------~~~~~~~-~~~l~~~~--~~~-~~l~v~----~---~~~~a~~~gad~v~l 94 (221)
T 1yad_A 35 IIITIQNEVDFIHIRERSKS---------AADILKL-LDLIFEGG--IDK-RKLVMN----G---RVDIALFSTIHRVQL 94 (221)
T ss_dssp HHHHHGGGCSEEEECCTTSC---------HHHHHHH-HHHHHHTT--CCG-GGEEEE----S---CHHHHHTTTCCEEEE
T ss_pred HHHHHHCCCCEEEEccCCCC---------HHHHHHH-HHHHHHhc--CcC-CeEEEe----C---hHHHHHHcCCCEEEe
Confidence 45566789999999987543 1222222 22233221 221 134443 2 247789999999999
Q ss_pred Ecc
Q 024250 176 ENS 178 (270)
Q Consensus 176 d~~ 178 (270)
...
T Consensus 95 ~~~ 97 (221)
T 1yad_A 95 PSG 97 (221)
T ss_dssp CTT
T ss_pred CCC
Confidence 754
No 41
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=83.46 E-value=30 Score=32.58 Aligned_cols=141 Identities=10% Similarity=0.165 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHHHHHhC-
Q 024250 90 LAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDM- 168 (270)
Q Consensus 90 ~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~~l~~~- 168 (270)
+...+.++++.+.|+++|=|- |.... . +..+..+++++.+.... ++++.|-++ +. ++++.-++.
T Consensus 340 ~~a~~~A~~~v~~GAdiIDIg-pg~~~-v-----~~~ee~~rvv~~i~~~~-----~vpisIDT~--~~-~v~eaal~~~ 404 (566)
T 1q7z_A 340 EIVIKEAKTQVEKGAEVLDVN-FGIES-Q-----IDVRYVEKIVQTLPYVS-----NVPLSLDIQ--NV-DLTERALRAY 404 (566)
T ss_dssp HHHHHHHHHHHHTTCSEEEEE-CSSGG-G-----SCHHHHHHHHHHHHHHT-----CSCEEEECC--CH-HHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCCCEEEEC-CCCCC-C-----CHHHHHHHHHHHHHhhC-----CceEEEeCC--CH-HHHHHHHHhc
Confidence 344455677889999998887 53221 1 22344566666665432 245666666 44 456666666
Q ss_pred -CCCEEEEEccCC-C--chhHHHhhhcccCCCeeeceEecCCCCCCCCHH----HHHHHHHHHhcc-ccCCceEecCCC-
Q 024250 169 -DADVITIENSRS-D--EKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTE----EIADRINKMLAV-LETNILWVNPDC- 238 (270)
Q Consensus 169 -~vd~l~ld~~~~-~--~~~l~~l~~~~~~~~~l~~GvVd~~~~~~e~~e----~v~~~i~~~~~~-~~~~~l~vsp~C- 238 (270)
+.+.+. |.... + .+.+...+++ +-.+++--.+.. .-.|.+ ...++++.+.+. ++ +++++.|..
T Consensus 405 ~G~~iIN-dis~~~~~~~~~~~~~~~~---g~~vV~m~~~~~--~p~t~~~~~~~l~~~~~~a~~~Gi~-~~IilDPg~~ 477 (566)
T 1q7z_A 405 PGRSLFN-SAKVDEEELEMKINLLKKY---GGTLIVLLMGKD--VPKSFEERKEYFEKALKILERHDFS-DRVIFDPGVL 477 (566)
T ss_dssp SSCCEEE-EEESCHHHHHHHHHHHHHH---CCEEEEESCSSS--CCCSHHHHHHHHHHHHHHHHHTTCG-GGEEEECCCC
T ss_pred CCCCEEE-ECCcchhhHHHHHHHHHHh---CCeEEEEeCCCC--CcCCHHHHHHHHHHHHHHHHHCCCC-CcEEEeCCCC
Confidence 776542 22111 1 2334445554 333333323321 112333 344444444432 34 899999999
Q ss_pred --CCCCCCHhHHHHHHHHHH
Q 024250 239 --GLKTRKYTEVKPALSNMV 256 (270)
Q Consensus 239 --gl~~~~~~~a~~kL~~l~ 256 (270)
||+. ...+-|+.+.
T Consensus 478 ~igfgk----~~~~~l~~~~ 493 (566)
T 1q7z_A 478 PLGAEG----KPVEVLKTIE 493 (566)
T ss_dssp CTTTTC----CHHHHHHHHH
T ss_pred cccCcH----HHHHHHHHHH
Confidence 8887 3344445444
No 42
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=82.25 E-value=17 Score=28.86 Aligned_cols=66 Identities=12% Similarity=0.156 Sum_probs=38.2
Q ss_pred HHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHHHHHhCCCCEE
Q 024250 94 DEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVI 173 (270)
Q Consensus 94 ~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~~l~~~~vd~l 173 (270)
+.++++.+.|+++||+++|..+. ....+. ...+.++.... ++.+.++ + -++...++++|++
T Consensus 30 ~~~~~~~~~G~~~i~l~~~~~~~---------~~~~~~-~~~l~~~~~~~--~v~v~v~----~---~~~~a~~~gad~v 90 (215)
T 1xi3_A 30 ESVREALEGGATAIQMRIKNAPT---------REMYEI-GKTLRQLTREY--DALFFVD----D---RVDVALAVDADGV 90 (215)
T ss_dssp HHHHHHHHTTCSEEEECCCSCCH---------HHHHHH-HHHHHHHHHHT--TCEEEEE----S---CHHHHHHHTCSEE
T ss_pred HHHHHHHHCCCCEEEECCCCCCH---------HHHHHH-HHHHHHHHHHc--CCeEEEc----C---hHHHHHHcCCCEE
Confidence 44666778999999999876431 112222 22333333322 2334443 1 2367788899999
Q ss_pred EEEcc
Q 024250 174 TIENS 178 (270)
Q Consensus 174 ~ld~~ 178 (270)
++...
T Consensus 91 ~l~~~ 95 (215)
T 1xi3_A 91 QLGPE 95 (215)
T ss_dssp EECTT
T ss_pred EECCc
Confidence 88643
No 43
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=81.65 E-value=25 Score=30.28 Aligned_cols=149 Identities=8% Similarity=0.122 Sum_probs=76.9
Q ss_pred HHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHHHHHhCCCCE
Q 024250 93 KDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADV 172 (270)
Q Consensus 93 ~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~~l~~~~vd~ 172 (270)
.+.++++.+.|+++|=|-=-+-..+. ..-+.++..+.+.+.++.+.+. ++++.+-|+ +. ++.+.-++.+++.
T Consensus 55 ~~~a~~~v~~GAdIIDIGgeSTrPga--~~v~~~eE~~Rv~pvI~~l~~~---~vpiSIDT~--~~-~Va~aAl~aGa~i 126 (294)
T 2dqw_A 55 LERAREMVAEGADILDLGAESTRPGA--APVPVEEEKRRLLPVLEAVLSL---GVPVSVDTR--KP-EVAEEALKLGAHL 126 (294)
T ss_dssp HHHHHHHHHHTCSEEEEECC-------------CCHHHHHHHHHHHHHTT---CSCEEEECS--CH-HHHHHHHHHTCSE
T ss_pred HHHHHHHHHCCCCEEEECCCcCCCCC--CCCCHHHHHHHHHHHHHHHHhC---CCeEEEECC--CH-HHHHHHHHhCCCE
Confidence 34567788889999766642211110 0002234577788888887653 355666555 33 4667777778885
Q ss_pred EEEEccC-CCchhHHHhhhcccCCCeeeceEec-C--CCC----CCCC-----HHHHHHHHHHHhccccCCceEecCCCC
Q 024250 173 ITIENSR-SDEKLLSVFREGVKYGAGIGPGVYD-I--HSP----RIPS-----TEEIADRINKMLAVLETNILWVNPDCG 239 (270)
Q Consensus 173 l~ld~~~-~~~~~l~~l~~~~~~~~~l~~GvVd-~--~~~----~~e~-----~e~v~~~i~~~~~~~~~~~l~vsp~Cg 239 (270)
|. |... .+.+.+...+++ +-.+++--.+ + ++. .-++ .+.+.++++.+.+ .|-.++++.|+-|
T Consensus 127 IN-dVsg~~d~~m~~v~a~~---~~~vVlmh~~eG~p~tm~~~~~y~dv~~ev~~~l~~~i~~a~~-~Gi~~IilDPG~G 201 (294)
T 2dqw_A 127 LN-DVTGLRDERMVALAARH---GVAAVVMHMPVPDPATMMAHARYRDVVAEVKAFLEAQARRALS-AGVPQVVLDPGFG 201 (294)
T ss_dssp EE-CSSCSCCHHHHHHHHHH---TCEEEEECCSSSCTTTGGGGCCCSSHHHHHHHHHHHHHHHHHH-TTCSCEEEECCTT
T ss_pred EE-ECCCCCChHHHHHHHHh---CCCEEEEcCCCCCCccccccCccccHHHHHHHHHHHHHHHHHH-CCCCcEEEcCCCC
Confidence 53 3322 234555666654 3233332222 1 110 1122 3344555555543 3545999999988
Q ss_pred CCCCCHhHHHHHHHHH
Q 024250 240 LKTRKYTEVKPALSNM 255 (270)
Q Consensus 240 l~~~~~~~a~~kL~~l 255 (270)
|+- +.+..++-|+.+
T Consensus 202 f~k-t~~~n~~ll~~l 216 (294)
T 2dqw_A 202 FGK-LLEHNLALLRRL 216 (294)
T ss_dssp SSC-CHHHHHHHHHTH
T ss_pred ccc-CHHHHHHHHHHH
Confidence 853 555333333333
No 44
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=81.48 E-value=14 Score=29.65 Aligned_cols=86 Identities=15% Similarity=0.176 Sum_probs=43.8
Q ss_pred HHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHHHHHhCCCCE
Q 024250 93 KDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADV 172 (270)
Q Consensus 93 ~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~~l~~~~vd~ 172 (270)
.+.++++.+.|+++||++++... . .+ .++++.+..+..+.++.-++. + .+.++...++++|+
T Consensus 22 ~~~~~~~~~~G~~~i~l~~~~~~--------~----~~----~i~~i~~~~~~~l~vg~g~~~-~-~~~i~~a~~~Gad~ 83 (212)
T 2v82_A 22 LAHVGAVIDAGFDAVEIPLNSPQ--------W----EQ----SIPAIVDAYGDKALIGAGTVL-K-PEQVDALARMGCQL 83 (212)
T ss_dssp HHHHHHHHHHTCCEEEEETTSTT--------H----HH----HHHHHHHHHTTTSEEEEECCC-S-HHHHHHHHHTTCCE
T ss_pred HHHHHHHHHCCCCEEEEeCCChh--------H----HH----HHHHHHHhCCCCeEEEecccc-C-HHHHHHHHHcCCCE
Confidence 34456667789999999987421 1 11 222222211212322221221 1 24567889999999
Q ss_pred EEEEccCCCchhHHHhhhcccCCCeeece
Q 024250 173 ITIENSRSDEKLLSVFREGVKYGAGIGPG 201 (270)
Q Consensus 173 l~ld~~~~~~~~l~~l~~~~~~~~~l~~G 201 (270)
+++.. .+.+..+..++. +..+.+|
T Consensus 84 V~~~~--~~~~~~~~~~~~---g~~~~~g 107 (212)
T 2v82_A 84 IVTPN--IHSEVIRRAVGY---GMTVCPG 107 (212)
T ss_dssp EECSS--CCHHHHHHHHHT---TCEEECE
T ss_pred EEeCC--CCHHHHHHHHHc---CCCEEee
Confidence 98543 223333444332 4445556
No 45
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=78.67 E-value=20 Score=28.65 Aligned_cols=74 Identities=12% Similarity=0.122 Sum_probs=41.4
Q ss_pred HHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHHHHHhCCCCEE
Q 024250 94 DEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVI 173 (270)
Q Consensus 94 ~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~~l~~~~vd~l 173 (270)
+.++.+.+.|++++|++.---+..... ...+ +.++++.+.. +.++.+|..--|..+.++.+.++++|++
T Consensus 20 ~~~~~~~~~G~~~i~~~~~dg~~~~~~-~~g~--------~~i~~i~~~~--~~~~~v~l~v~d~~~~i~~~~~~gad~v 88 (220)
T 2fli_A 20 SELARIEETDAEYVHIDIMDGQFVPNI-SFGA--------DVVASMRKHS--KLVFDCHLMVVDPERYVEAFAQAGADIM 88 (220)
T ss_dssp HHHHHHHHTTCCEEEEEEEBSSSSSCB-CBCH--------HHHHHHHTTC--CSEEEEEEESSSGGGGHHHHHHHTCSEE
T ss_pred HHHHHHHHcCCCEEEEEeecCCCCCcc-ccCH--------HHHHHHHHhC--CCCEEEEEeecCHHHHHHHHHHcCCCEE
Confidence 446667788999999995211100000 0011 1222222222 2456777765454444588999999999
Q ss_pred EEEcc
Q 024250 174 TIENS 178 (270)
Q Consensus 174 ~ld~~ 178 (270)
.+-..
T Consensus 89 ~vh~~ 93 (220)
T 2fli_A 89 TIHTE 93 (220)
T ss_dssp EEEGG
T ss_pred EEccC
Confidence 87653
No 46
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=77.82 E-value=32 Score=30.28 Aligned_cols=93 Identities=9% Similarity=0.072 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHHHHHHcCCCEEEeccCc-------cccCCCCC----CccHHHHHHHHHHHHHHHhcCCCCCceEEEee
Q 024250 85 CYQIALAIKDEVEDLEKAGINVIQIDEAA-------LREGLPLR----KSEHAFYLDWAVHSFRITNCGVQDTTQIHTHM 153 (270)
Q Consensus 85 ~~~l~~~~~~~~~~l~~~G~~~IQiDEP~-------l~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~ 153 (270)
++.+.+.+.+.++...++|++.|+|.--- |+.....+ .+..+.-..++.+.++.+-+.++.+.+|.+=+
T Consensus 153 I~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRi 232 (363)
T 3l5l_A 153 IARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARF 232 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEe
Confidence 56777788888888889999999998531 11111001 11222224455666666666665433444433
Q ss_pred ccCC------c-----hhHHHHHHhCCCCEEEEEc
Q 024250 154 CYSN------F-----NDIIHSIIDMDADVITIEN 177 (270)
Q Consensus 154 c~g~------~-----~~~~~~l~~~~vd~l~ld~ 177 (270)
...+ + ..+...|.+.++|.|++-.
T Consensus 233 s~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~ 267 (363)
T 3l5l_A 233 GVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSV 267 (363)
T ss_dssp EEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred cchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEec
Confidence 2111 2 2356678889999999864
No 47
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=77.64 E-value=31 Score=30.23 Aligned_cols=93 Identities=12% Similarity=0.120 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHHHHHcCCCEEEeccCc--c-----ccCCCCC----CccHHHHHHHHHHHHHHHhcCCCCCceEEEee
Q 024250 85 CYQIALAIKDEVEDLEKAGINVIQIDEAA--L-----REGLPLR----KSEHAFYLDWAVHSFRITNCGVQDTTQIHTHM 153 (270)
Q Consensus 85 ~~~l~~~~~~~~~~l~~~G~~~IQiDEP~--l-----~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~ 153 (270)
++++.+.+.+.++...++|++.|+|.--- | +.....+ .+....-..++.+.++.+-+.++.+.+|++-+
T Consensus 147 I~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRl 226 (349)
T 3hgj_A 147 MERILQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRV 226 (349)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEe
Confidence 56777788888888889999999998521 1 1100000 11222223344444544444443333344433
Q ss_pred cc------C-C---chhHHHHHHhCCCCEEEEEc
Q 024250 154 CY------S-N---FNDIIHSIIDMDADVITIEN 177 (270)
Q Consensus 154 c~------g-~---~~~~~~~l~~~~vd~l~ld~ 177 (270)
.. | + ...+...|.+.++|.|++-.
T Consensus 227 s~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~ 260 (349)
T 3hgj_A 227 SATDWGEGGWSLEDTLAFARRLKELGVDLLDCSS 260 (349)
T ss_dssp ESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred ccccccCCCCCHHHHHHHHHHHHHcCCCEEEEec
Confidence 31 1 1 12356677889999999874
No 48
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=77.52 E-value=31 Score=29.00 Aligned_cols=148 Identities=11% Similarity=0.135 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHHHHHhC--
Q 024250 91 AIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDM-- 168 (270)
Q Consensus 91 ~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~~l~~~-- 168 (270)
...+.++++.+.|+++|-|-=- ....+..+.++++++.+... . ++++.+-++ +. ++++.-++.
T Consensus 26 ~a~~~a~~~v~~GAdiIDIg~g-------~~~v~~~ee~~rvv~~i~~~---~--~~pisIDT~--~~-~v~~aAl~a~~ 90 (262)
T 1f6y_A 26 PVQEWARRQEEGGARALDLNVG-------PAVQDKVSAMEWLVEVTQEV---S--NLTLCLDST--NI-KAIEAGLKKCK 90 (262)
T ss_dssp HHHHHHHHHHHHTCSEEEEBCC-----------CHHHHHHHHHHHHHTT---C--CSEEEEECS--CH-HHHHHHHHHCS
T ss_pred HHHHHHHHHHHCCCcEEEECCC-------CCCCChHHHHHHHHHHHHHh---C--CCeEEEeCC--CH-HHHHHHHhhCC
Confidence 3444567777899999877631 01113344566666666642 1 356677666 33 456666665
Q ss_pred CCCEEEEEccCC-Cc--hhHHHhhhcccCCCeeeceEecCCCCCCCCH----HHHHHHHHHHhcc-ccCCceEecCCCCC
Q 024250 169 DADVITIENSRS-DE--KLLSVFREGVKYGAGIGPGVYDIHSPRIPST----EEIADRINKMLAV-LETNILWVNPDCGL 240 (270)
Q Consensus 169 ~vd~l~ld~~~~-~~--~~l~~l~~~~~~~~~l~~GvVd~~~~~~e~~----e~v~~~i~~~~~~-~~~~~l~vsp~Cgl 240 (270)
+.+.+. |.... +. +.+...+++ +-.+++=-.+.+.. -.+. +...++++.+.+. ++++++++.|+.|.
T Consensus 91 Ga~iIN-dvs~~~d~~~~~~~~~a~~---~~~vvlmh~~~~G~-p~t~~~~~~~~~~~~~~a~~~Gi~~~~IilDPg~g~ 165 (262)
T 1f6y_A 91 NRAMIN-STNAEREKVEKLFPLAVEH---GAALIGLTMNKTGI-PKDSDTRLAFAMELVAAADEFGLPMEDLYIDPLILP 165 (262)
T ss_dssp SCEEEE-EECSCHHHHHHHHHHHHHT---TCEEEEESCCSSCS-CSSHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCC
T ss_pred CCCEEE-ECCCCcccHHHHHHHHHHh---CCcEEEEcCCCCCC-CCCHHHHHHHHHHHHHHHHHCCCCcccEEEeCCCCc
Confidence 666553 32211 11 334444543 32222211111111 1223 3334444554432 35679999999983
Q ss_pred CCCCHhHHHHHHHHHHHH
Q 024250 241 KTRKYTEVKPALSNMVAA 258 (270)
Q Consensus 241 ~~~~~~~a~~kL~~l~~~ 258 (270)
...+.+..++.|+.+.+.
T Consensus 166 ~g~~~~~~~~~l~~l~~l 183 (262)
T 1f6y_A 166 ANVAQDHAPEVLKTLQQI 183 (262)
T ss_dssp TTTCTTHHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHH
Confidence 344445455556655544
No 49
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=76.35 E-value=35 Score=28.96 Aligned_cols=150 Identities=12% Similarity=0.090 Sum_probs=84.5
Q ss_pred HHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHHHHHhCCCC
Q 024250 92 IKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDAD 171 (270)
Q Consensus 92 ~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~~l~~~~vd 171 (270)
..+.+++|.++|+++|.+==|.-+..++... + ..+.++.+.+ .+ ++++.+|+ .|. +-++...+++++
T Consensus 28 k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~-~-------~~e~~~~i~~-~~-~~~v~~l~--~n~-~~i~~a~~~G~~ 94 (295)
T 1ydn_A 28 KIALINRLSDCGYARIEATSFVSPKWVPQLA-D-------SREVMAGIRR-AD-GVRYSVLV--PNM-KGYEAAAAAHAD 94 (295)
T ss_dssp HHHHHHHHTTTTCSEEEEEECSCTTTCGGGT-T-------HHHHHHHSCC-CS-SSEEEEEC--SSH-HHHHHHHHTTCS
T ss_pred HHHHHHHHHHcCcCEEEEccCcCcccccccc-C-------HHHHHHHHHh-CC-CCEEEEEe--CCH-HHHHHHHHCCCC
Confidence 3445677788999998775433221111100 1 1234444433 22 46676776 354 456788899999
Q ss_pred EEEEEccCC----------C-chhHHHhhhc----ccCCCeee--ceEe-cCCCCCCCCHHHHHHHHHHHhccccCCceE
Q 024250 172 VITIENSRS----------D-EKLLSVFREG----VKYGAGIG--PGVY-DIHSPRIPSTEEIADRINKMLAVLETNILW 233 (270)
Q Consensus 172 ~l~ld~~~~----------~-~~~l~~l~~~----~~~~~~l~--~GvV-d~~~~~~e~~e~v~~~i~~~~~~~~~~~l~ 233 (270)
.+.++...+ + .++++...+. -..+..+. ++.+ +.-.....+++.+.+.++.+.+ .|.+.+.
T Consensus 95 ~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~-~G~d~i~ 173 (295)
T 1ydn_A 95 EIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFS-LGCHEVS 173 (295)
T ss_dssp EEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHHHHHHHHH-HTCSEEE
T ss_pred EEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHh-cCCCEEE
Confidence 999986432 1 2233333221 02344444 2211 1011125689999988888765 4888998
Q ss_pred ecCCCCCCCCCHhHHHHHHHHHHH
Q 024250 234 VNPDCGLKTRKYTEVKPALSNMVA 257 (270)
Q Consensus 234 vsp~Cgl~~~~~~~a~~kL~~l~~ 257 (270)
+...-|. .+|....+-++.+.+
T Consensus 174 l~Dt~G~--~~P~~~~~lv~~l~~ 195 (295)
T 1ydn_A 174 LGDTIGR--GTPDTVAAMLDAVLA 195 (295)
T ss_dssp EEETTSC--CCHHHHHHHHHHHHT
T ss_pred ecCCCCC--cCHHHHHHHHHHHHH
Confidence 8877666 577766666665543
No 50
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=74.62 E-value=19 Score=29.61 Aligned_cols=69 Identities=10% Similarity=0.093 Sum_probs=42.5
Q ss_pred HHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHHHHHhCCCCEEEEE
Q 024250 97 EDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIE 176 (270)
Q Consensus 97 ~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~~l~~~~vd~l~ld 176 (270)
+.+.++|+++|++.++..... . .....+.++++.+..+ .++.+|-...+. +-+..++++++|++.+-
T Consensus 37 ~~~~~~Gad~i~v~d~~~~~~------~----~~~~~~~i~~i~~~~~--ipvi~~ggI~~~-~~~~~~~~~Gad~V~lg 103 (253)
T 1thf_D 37 KFYSEIGIDELVFLDITASVE------K----RKTMLELVEKVAEQID--IPFTVGGGIHDF-ETASELILRGADKVSIN 103 (253)
T ss_dssp HHHHHTTCCEEEEEESSCSSS------H----HHHHHHHHHHHHTTCC--SCEEEESSCCSH-HHHHHHHHTTCSEEEES
T ss_pred HHHHHcCCCEEEEECCchhhc------C----CcccHHHHHHHHHhCC--CCEEEeCCCCCH-HHHHHHHHcCCCEEEEC
Confidence 556788999999998653310 1 1122345555555433 556666444333 34677788999999987
Q ss_pred cc
Q 024250 177 NS 178 (270)
Q Consensus 177 ~~ 178 (270)
..
T Consensus 104 ~~ 105 (253)
T 1thf_D 104 TA 105 (253)
T ss_dssp HH
T ss_pred hH
Confidence 64
No 51
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=74.23 E-value=35 Score=29.67 Aligned_cols=90 Identities=10% Similarity=0.068 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHHHHHcCCCEEEecc-----------CccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEee
Q 024250 85 CYQIALAIKDEVEDLEKAGINVIQIDE-----------AALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHM 153 (270)
Q Consensus 85 ~~~l~~~~~~~~~~l~~~G~~~IQiDE-----------P~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~ 153 (270)
++++.+.+.+.++.+.++|++.|+|+- |..-.--+...+....-.+++.+.++.+.+.++ .++.+-+
T Consensus 139 I~~~i~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v~--~pv~vri 216 (338)
T 1z41_A 139 VKETVQEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWD--GPLFVRV 216 (338)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCC--SCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHcC--CcEEEEe
Confidence 466777788888888899999999984 211100000011221112333344443333332 3445554
Q ss_pred ccCC-----c-----hhHHHHHHhCCCCEEEEE
Q 024250 154 CYSN-----F-----NDIIHSIIDMDADVITIE 176 (270)
Q Consensus 154 c~g~-----~-----~~~~~~l~~~~vd~l~ld 176 (270)
...+ + ..+...|.+.++|.|++-
T Consensus 217 s~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~ 249 (338)
T 1z41_A 217 SASDYTDKGLDIADHIGFAKWMKEQGVDLIDCS 249 (338)
T ss_dssp ECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred cCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 4321 1 145667788999999985
No 52
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=74.04 E-value=44 Score=29.12 Aligned_cols=88 Identities=14% Similarity=0.193 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHHHHHHcCCCEEEeccCc-------cccCC----CCCCccHH---HHHHHHHHHHHHHhcCCCCCceEE
Q 024250 85 CYQIALAIKDEVEDLEKAGINVIQIDEAA-------LREGL----PLRKSEHA---FYLDWAVHSFRITNCGVQDTTQIH 150 (270)
Q Consensus 85 ~~~l~~~~~~~~~~l~~~G~~~IQiDEP~-------l~~~l----~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~ 150 (270)
++++.+.+.+..+...++|++.|+|.--- |+... +.-.+... ++.-++++++++.+ + .++.
T Consensus 139 I~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v---~--~pv~ 213 (340)
T 3gr7_A 139 IEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVW---D--GPLF 213 (340)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC---C--SCEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhc---C--CceE
Confidence 56777788888888889999999998431 11110 10011222 23333444444443 2 2334
Q ss_pred EeeccC----------CchhHHHHHHhCCCCEEEEEc
Q 024250 151 THMCYS----------NFNDIIHSIIDMDADVITIEN 177 (270)
Q Consensus 151 lH~c~g----------~~~~~~~~l~~~~vd~l~ld~ 177 (270)
+-+... ++..+...|.+.++|.|++-.
T Consensus 214 vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~ 250 (340)
T 3gr7_A 214 VRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSS 250 (340)
T ss_dssp EEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEEC
T ss_pred EEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEec
Confidence 433322 122567788889999999863
No 53
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=72.61 E-value=49 Score=28.95 Aligned_cols=91 Identities=16% Similarity=0.177 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHHHHHHcCCCEEEeccC-------ccccCCCCC----CccHHHHHHHHHHHHHHHhcCCCCCceEEEee
Q 024250 85 CYQIALAIKDEVEDLEKAGINVIQIDEA-------ALREGLPLR----KSEHAFYLDWAVHSFRITNCGVQDTTQIHTHM 153 (270)
Q Consensus 85 ~~~l~~~~~~~~~~l~~~G~~~IQiDEP-------~l~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~ 153 (270)
++++.+.+.+.++...++|++.|+|.-- +++.....+ .+....-..++.+.++.+-+.++.+.++.+=+
T Consensus 138 I~~ii~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRl 217 (343)
T 3kru_A 138 IKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRV 217 (343)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEE
T ss_pred HHHHHHHHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEe
Confidence 5677777888888888899999999932 222211111 11222223444555555555554333444443
Q ss_pred ccCC----------chhHHHHHHhCCCCEEEEE
Q 024250 154 CYSN----------FNDIIHSIIDMDADVITIE 176 (270)
Q Consensus 154 c~g~----------~~~~~~~l~~~~vd~l~ld 176 (270)
...+ +..+...|.+. +|.|++-
T Consensus 218 s~~~~~~~g~~~~~~~~~a~~l~~~-vd~i~vs 249 (343)
T 3kru_A 218 SADDYMEGGINIDMMVEYINMIKDK-VDLIDVS 249 (343)
T ss_dssp ECCCSSTTSCCHHHHHHHHHHHTTT-CSEEEEE
T ss_pred echhhhccCccHHHHHHHHHHhhcc-ccEEecc
Confidence 3211 12356677778 9999985
No 54
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=72.39 E-value=30 Score=28.18 Aligned_cols=68 Identities=4% Similarity=0.059 Sum_probs=38.5
Q ss_pred HHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHHHHHhCCCCEEEEE
Q 024250 97 EDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIE 176 (270)
Q Consensus 97 ~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~~l~~~~vd~l~ld 176 (270)
+.+.++|+++|++++-..... ... . + +.++++.+.. +.++.+|--.-+. +-++.++++++|.+++-
T Consensus 39 ~~~~~~Gad~i~v~~~d~~~~--~~~-~---~-----~~i~~i~~~~--~ipv~v~ggI~~~-~~~~~~l~~Gad~V~lg 104 (244)
T 1vzw_A 39 LAWQRSGAEWLHLVDLDAAFG--TGD-N---R-----ALIAEVAQAM--DIKVELSGGIRDD-DTLAAALATGCTRVNLG 104 (244)
T ss_dssp HHHHHTTCSEEEEEEHHHHHT--SCC-C---H-----HHHHHHHHHC--SSEEEEESSCCSH-HHHHHHHHTTCSEEEEC
T ss_pred HHHHHcCCCEEEEecCchhhc--CCC-h---H-----HHHHHHHHhc--CCcEEEECCcCCH-HHHHHHHHcCCCEEEEC
Confidence 556678999999987432211 000 1 1 2222322222 2456666332233 34677888999999988
Q ss_pred cc
Q 024250 177 NS 178 (270)
Q Consensus 177 ~~ 178 (270)
..
T Consensus 105 ~~ 106 (244)
T 1vzw_A 105 TA 106 (244)
T ss_dssp HH
T ss_pred ch
Confidence 64
No 55
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=71.60 E-value=40 Score=27.59 Aligned_cols=84 Identities=15% Similarity=0.195 Sum_probs=46.4
Q ss_pred HHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHHHHHhCCCCEE
Q 024250 94 DEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVI 173 (270)
Q Consensus 94 ~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~~l~~~~vd~l 173 (270)
+.++++.+.|+++||+.+-.. .. .+.++++.+..+ ...+...+.. ..+-.+...++++|.+
T Consensus 33 ~~~~al~~gGv~~iel~~k~~---------~~-------~~~i~~l~~~~~-~l~vgaGtvl--~~d~~~~A~~aGAd~v 93 (224)
T 1vhc_A 33 PLADTLAKNGLSVAEITFRSE---------AA-------ADAIRLLRANRP-DFLIAAGTVL--TAEQVVLAKSSGADFV 93 (224)
T ss_dssp HHHHHHHHTTCCEEEEETTST---------TH-------HHHHHHHHHHCT-TCEEEEESCC--SHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHcCCCEEEEeccCc---------hH-------HHHHHHHHHhCc-CcEEeeCcEe--eHHHHHHHHHCCCCEE
Confidence 346667789999999985321 11 123333333333 2334444433 2356788899999999
Q ss_pred EEEccCCCchhHHHhhhcccCCCeeece
Q 024250 174 TIENSRSDEKLLSVFREGVKYGAGIGPG 201 (270)
Q Consensus 174 ~ld~~~~~~~~l~~l~~~~~~~~~l~~G 201 (270)
+... .+.+..+..++. +..+.+|
T Consensus 94 ~~p~--~d~~v~~~ar~~---g~~~i~G 116 (224)
T 1vhc_A 94 VTPG--LNPKIVKLCQDL---NFPITPG 116 (224)
T ss_dssp ECSS--CCHHHHHHHHHT---TCCEECE
T ss_pred EECC--CCHHHHHHHHHh---CCCEEec
Confidence 7652 234334444442 4445566
No 56
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}
Probab=71.18 E-value=12 Score=33.25 Aligned_cols=91 Identities=14% Similarity=0.151 Sum_probs=54.1
Q ss_pred ceEEEeec-cCC-chhHHHHHHhCCCC--EE---EEEccCCCchhHHHhhhcccCCCeeeceEecCCC------CCCCCH
Q 024250 147 TQIHTHMC-YSN-FNDIIHSIIDMDAD--VI---TIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHS------PRIPST 213 (270)
Q Consensus 147 ~~i~lH~c-~g~-~~~~~~~l~~~~vd--~l---~ld~~~~~~~~l~~l~~~~~~~~~l~~GvVd~~~------~~~e~~ 213 (270)
.+|++|+. +|+ ..+.+..|.+.+++ .+ |++....+.+....+.+ .|-.|+++-+-+.. .+..+-
T Consensus 204 lPV~iH~~gr~~a~~e~l~iL~e~g~~~~~vvi~H~~~s~~~~e~a~~~l~---~G~~I~f~g~gt~~~f~~~~~~~~~d 280 (364)
T 3k2g_A 204 LPLMVHLPGWFRLAHRVLDLVEEEGADLRHTVLCHMNPSHMDPVYQATLAQ---RGAFLEFDMIGMDFFYADQGVQCPSD 280 (364)
T ss_dssp CCEEEECCTTSCCHHHHHHHHHHTTCCGGGEEECCCGGGTTCHHHHHHHHH---HTCEEEECCTTCCCEETTTTEECCCH
T ss_pred CeEEEecCCCCccHHHHHHHHHHcCCCCCceEEECCCCCCCCHHHHHHHHh---CCcEEEecCCcccccccccccccccH
Confidence 56899974 433 35677778777765 33 33321113433344443 25566665432111 123455
Q ss_pred HHHHHHHHHHhccccCCceEecCCCCC
Q 024250 214 EEIADRINKMLAVLETNILWVNPDCGL 240 (270)
Q Consensus 214 e~v~~~i~~~~~~~~~~~l~vsp~Cgl 240 (270)
++-.+.++++++..+.+++++++||..
T Consensus 281 ~~ra~~l~~lv~~gp~drilleTD~p~ 307 (364)
T 3k2g_A 281 DEVARAILGLADHGYLDRILLSHDVFV 307 (364)
T ss_dssp HHHHHHHHHHHHTTCGGGEEECCCCCS
T ss_pred HHHHHHHHHHHHhCCcccEEEeCCCCC
Confidence 567788888888888899999999975
No 57
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*
Probab=71.01 E-value=37 Score=29.96 Aligned_cols=89 Identities=19% Similarity=0.184 Sum_probs=52.6
Q ss_pred CceEEEeeccCCc-hhHHHHHHhCCCC--EEEE---EccCCCchhHHHhhhcccCCCeeeceEecCC-CCCCCCHHHHHH
Q 024250 146 TTQIHTHMCYSNF-NDIIHSIIDMDAD--VITI---ENSRSDEKLLSVFREGVKYGAGIGPGVYDIH-SPRIPSTEEIAD 218 (270)
Q Consensus 146 ~~~i~lH~c~g~~-~~~~~~l~~~~vd--~l~l---d~~~~~~~~l~~l~~~~~~~~~l~~GvVd~~-~~~~e~~e~v~~ 218 (270)
+.+|.+|+-.+.- .+.+..|.+.+++ .+.+ ++.. +.+..+.+.+ .|-.|++.-+-.. .....+-++-++
T Consensus 206 G~Pv~iHt~~~~~~~e~l~iL~eeG~~~~~vvi~H~~~~~-d~~~~~~~l~---~G~yl~fD~iG~~~~~~~p~d~~r~~ 281 (360)
T 3tn4_A 206 GAVIITHTQEGTMGPEQAAYLLEHGADPKKIVIGHMCDNT-DPDYHRKTLA---YGVYIAFDRFGIQGMVGAPTDEERVR 281 (360)
T ss_dssp CCEEEEECSTTCCHHHHHHHHHHTTCCGGGEEECCGGGCC-CHHHHHHHHT---TTCEEEECCTTCCCSTTCCCHHHHHH
T ss_pred CCcEEEEcCcccCCHHHHHHHHHcCCCCCceEEEcCCCCC-CHHHHHHHHH---cCCEEEEcccccccccCCCChHHHHH
Confidence 3678999765432 2466778888875 3433 4433 4444444443 3445554221111 111234456667
Q ss_pred HHHHHhccccCCceEecCCC
Q 024250 219 RINKMLAVLETNILWVNPDC 238 (270)
Q Consensus 219 ~i~~~~~~~~~~~l~vsp~C 238 (270)
.++++++..+.+|++|++||
T Consensus 282 ~l~~lv~~g~~drILLstDa 301 (360)
T 3tn4_A 282 TLLALLRDGYEKQIMLSHDT 301 (360)
T ss_dssp HHHHHHHTTCGGGEEECCCC
T ss_pred HHHHHHHhcCcceEEEecCC
Confidence 78888888888999999999
No 58
>3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A*
Probab=70.27 E-value=27 Score=30.53 Aligned_cols=91 Identities=16% Similarity=0.104 Sum_probs=52.0
Q ss_pred ceEEEeeccC-CchhHHHHHHhCCCC--EEEEEccC--CCchhHHHhhhcccCCCeeeceEecCCCC-CCCCHHHHHHHH
Q 024250 147 TQIHTHMCYS-NFNDIIHSIIDMDAD--VITIENSR--SDEKLLSVFREGVKYGAGIGPGVYDIHSP-RIPSTEEIADRI 220 (270)
Q Consensus 147 ~~i~lH~c~g-~~~~~~~~l~~~~vd--~l~ld~~~--~~~~~l~~l~~~~~~~~~l~~GvVd~~~~-~~e~~e~v~~~i 220 (270)
.++++|+..| +-.+.++.|.+.+++ .+.+-... .+.+....+.+ .|-.++++-+.+..- ...+-..-.+.+
T Consensus 187 lPViiH~~~gr~a~~~~~iL~~~~~~~~~~vi~H~~~~~~~e~a~~~l~---~G~~i~~~g~~t~~~~~~p~~~~~~~~l 263 (339)
T 3gtx_A 187 VPIITHTQEGQQGPQQAELLTSLGADPARIMIGHMDGNTDPAYHRETLR---HGVSIAFDRIGLQGMVGTPTDAERLSVL 263 (339)
T ss_dssp CCEEEECSTTCCHHHHHHHHHHTTCCGGGEEECCGGGCCCHHHHHHHHT---TTCEEEECCTTCCSSTTCCCHHHHHHHH
T ss_pred CeEEEeCCCCcCHHHHHHHHHHcCCCcccEEEEccCCCCCHHHHHHHHH---cCcEEEEccCccccccCCCchHHHHHHH
Confidence 4689998543 223467777777664 34333321 23433334433 355666654322111 012222455677
Q ss_pred HHHhccccCCceEecCCCCC
Q 024250 221 NKMLAVLETNILWVNPDCGL 240 (270)
Q Consensus 221 ~~~~~~~~~~~l~vsp~Cgl 240 (270)
+++++..+.+++++++||..
T Consensus 264 ~~li~~~~~drilleTD~p~ 283 (339)
T 3gtx_A 264 TTLLGEGYADRLLLSHDSIW 283 (339)
T ss_dssp HHHHHTTCGGGEEECCCCEE
T ss_pred HHHHHhcCCCeEEEecCCCc
Confidence 88888888899999999996
No 59
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=69.53 E-value=6 Score=34.25 Aligned_cols=61 Identities=18% Similarity=0.237 Sum_probs=37.9
Q ss_pred HHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCch-hHHHHHHhCCCCEE
Q 024250 95 EVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFN-DIIHSIIDMDADVI 173 (270)
Q Consensus 95 ~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~-~~~~~l~~~~vd~l 173 (270)
++++..++|+++|++|.++.. ....+++.++ +.+ .+-.. |+.+ +.+..+.+++||.|
T Consensus 219 e~~eAl~aGaDiImLDn~s~~------------~l~~av~~~~-------~~v--~leaS-GGIt~~~i~~~A~tGVD~I 276 (300)
T 3l0g_A 219 QVEESLSNNVDMILLDNMSIS------------EIKKAVDIVN-------GKS--VLEVS-GCVNIRNVRNIALTGVDYI 276 (300)
T ss_dssp HHHHHHHTTCSEEEEESCCHH------------HHHHHHHHHT-------TSS--EEEEE-SSCCTTTHHHHHTTTCSEE
T ss_pred HHHHHHHcCCCEEEECCCCHH------------HHHHHHHhhc-------Cce--EEEEE-CCCCHHHHHHHHHcCCCEE
Confidence 455566789999999974321 1222333221 112 34445 5553 57788999999999
Q ss_pred EEEc
Q 024250 174 TIEN 177 (270)
Q Consensus 174 ~ld~ 177 (270)
|+=.
T Consensus 277 svGa 280 (300)
T 3l0g_A 277 SIGC 280 (300)
T ss_dssp ECGG
T ss_pred EeCc
Confidence 9875
No 60
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=69.28 E-value=56 Score=28.24 Aligned_cols=149 Identities=7% Similarity=0.028 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCch---hHHHHHHh
Q 024250 91 AIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFN---DIIHSIID 167 (270)
Q Consensus 91 ~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~---~~~~~l~~ 167 (270)
...+..+++.+.|+++|-|---+ ......+.++++..+ +++.+.+ ..+ +++.|--| ||-. ++++..++
T Consensus 75 ~~~~~A~~~v~~GAdiIDIg~~S--trP~~~~vs~eee~~-vV~~v~~---~~~--vplsI~DT-~~~~~~~~V~eaal~ 145 (310)
T 2h9a_B 75 DPVAWAKKCVEYGADIVALRLVS--AHPDGQNRSGAELAE-VCKAVAD---AID--VPLMIIGC-GVEEKDAEIFPVIGE 145 (310)
T ss_dssp CHHHHHHHHHHTTCSEEEEECGG--GCTTTTCCCHHHHHH-HHHHHHH---HCS--SCEEEECC-SCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCcEEEEeCcc--CCCCCCCCCHHHHHH-HHHHHHH---hCC--ceEEEECC-CCCCCCHHHHHHHHH
Confidence 44555666779999997665322 111111112333333 3333333 222 44544222 3321 46677777
Q ss_pred CCCC--EEEEEccC-CCchhHHHhhhcccCCCeeeceEecCCCCCCCCHHHHHHHHHHHhcc-ccCCceEecCCCCCCCC
Q 024250 168 MDAD--VITIENSR-SDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAV-LETNILWVNPDCGLKTR 243 (270)
Q Consensus 168 ~~vd--~l~ld~~~-~~~~~l~~l~~~~~~~~~l~~GvVd~~~~~~e~~e~v~~~i~~~~~~-~~~~~l~vsp~Cgl~~~ 243 (270)
.+.+ .+--|... +..+.+...+++ +-.+++- .. .+.+.+.++++.+.+. ++++++++.|.+|+-.-
T Consensus 146 aga~~k~iINdvs~~~~~~~~~~aa~~---g~~vv~m--~~-----~dv~~l~~~~~~a~~~Gi~~e~IilDPg~g~~g~ 215 (310)
T 2h9a_B 146 ALSGRNCLLSSATKDNYKPIVATCMVH---GHSVVAS--AP-----LDINLSKQLNIMIMEMNLAPNRIIMDPLIGALGY 215 (310)
T ss_dssp HTTTSCCEEEEECTTTHHHHHHHHHHH---TCEEEEE--CS-----SCHHHHHHHHHHHHTTTCCGGGEEEECCCCCTTT
T ss_pred hCCCCCCEEEECCCCccHHHHHHHHHh---CCCEEEE--Ch-----hHHHHHHHHHHHHHHCCCChhhEEEeCCCccccC
Confidence 8776 34334332 223344444543 3333321 11 1467777777777653 45689999999996444
Q ss_pred CHhHHHHHHHHHHHH
Q 024250 244 KYTEVKPALSNMVAA 258 (270)
Q Consensus 244 ~~~~a~~kL~~l~~~ 258 (270)
+.+....+++.+..+
T Consensus 216 ~~e~~~~~l~~ir~~ 230 (310)
T 2h9a_B 216 GIEYSYSIIERMRLG 230 (310)
T ss_dssp THHHHHHHHHHHHHH
T ss_pred chHhHHHHHHHHHHh
Confidence 555444556555553
No 61
>3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis}
Probab=69.12 E-value=34 Score=30.23 Aligned_cols=92 Identities=14% Similarity=0.135 Sum_probs=53.4
Q ss_pred ceEEEeecc-C-CchhHHHHHHhC-CCC--EE---EEEccCCCchhHHHhhhcccCCCeeeceEecCCC-CC-----CCC
Q 024250 147 TQIHTHMCY-S-NFNDIIHSIIDM-DAD--VI---TIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHS-PR-----IPS 212 (270)
Q Consensus 147 ~~i~lH~c~-g-~~~~~~~~l~~~-~vd--~l---~ld~~~~~~~~l~~l~~~~~~~~~l~~GvVd~~~-~~-----~e~ 212 (270)
.+|++|+.. | ...+.+..|.+. +++ .+ |++-...+.+....+.+ .|-.|+++-+ +.. .. ..+
T Consensus 194 lPV~iH~~r~~~a~~e~l~iL~e~~~~~~~~vvi~H~~rs~~~~e~a~~~l~---~G~~I~~~g~-g~~~tf~~~~~~~~ 269 (365)
T 3rhg_A 194 ASMNIHMPGWQRRGDEVLDILLTEMGCDPAKISLAHSDPSGKDIDYQCKMLD---RGVWLEFDMI-GLDISFPKEGAAPS 269 (365)
T ss_dssp CEEEEECCTTSCCHHHHHHHHTTTTCCCGGGEEESCCGGGTTCHHHHHHHHH---TTCEEEECCT-TCCCBCSSSCBCCC
T ss_pred CcEEEECCCCCcCHHHHHHHHHhccCCCCCceEEecCCCCCCCHHHHHHHHh---CCCEEEecCC-Cccccccccccccc
Confidence 678999743 2 334677777765 654 34 33322123433344443 3556666643 111 11 123
Q ss_pred HHHHHHHHHHHhccccCCceEecCCCCCCC
Q 024250 213 TEEIADRINKMLAVLETNILWVNPDCGLKT 242 (270)
Q Consensus 213 ~e~v~~~i~~~~~~~~~~~l~vsp~Cgl~~ 242 (270)
-+.-.+.++++++..+.+++++++||+..+
T Consensus 270 d~~~a~~l~~li~~g~~drilleTD~p~l~ 299 (365)
T 3rhg_A 270 VMDTVEAVATLIERGYGNQIVLSHDVFLKQ 299 (365)
T ss_dssp HHHHHHHHHHHHHTTCGGGEEECCCCCSGG
T ss_pred hHHHHHHHHHHHHhCCCCcEEEeCCCCCCC
Confidence 445667788888887889999999997643
No 62
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=68.00 E-value=20 Score=29.01 Aligned_cols=71 Identities=14% Similarity=0.155 Sum_probs=40.4
Q ss_pred HHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHHHHHhCCCCEE
Q 024250 94 DEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVI 173 (270)
Q Consensus 94 ~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~~l~~~~vd~l 173 (270)
+.++.+.++|+++|++.++.... . ... ...+.++++.+..+ .++.+|....+..+ +..+.++++|++
T Consensus 37 ~~a~~~~~~G~d~i~v~~~~~~~---~---~~~----~~~~~i~~i~~~~~--ipvi~~g~i~~~~~-~~~~~~~Gad~V 103 (253)
T 1h5y_A 37 EMAVRYEEEGADEIAILDITAAP---E---GRA----TFIDSVKRVAEAVS--IPVLVGGGVRSLED-ATTLFRAGADKV 103 (253)
T ss_dssp HHHHHHHHTTCSCEEEEECCCCT---T---THH----HHHHHHHHHHHHCS--SCEEEESSCCSHHH-HHHHHHHTCSEE
T ss_pred HHHHHHHHcCCCEEEEEeCCccc---c---CCc----ccHHHHHHHHHhcC--CCEEEECCCCCHHH-HHHHHHcCCCEE
Confidence 34566778899999999865431 0 111 11223333333232 44555543334433 467788999999
Q ss_pred EEEc
Q 024250 174 TIEN 177 (270)
Q Consensus 174 ~ld~ 177 (270)
.+-.
T Consensus 104 ~i~~ 107 (253)
T 1h5y_A 104 SVNT 107 (253)
T ss_dssp EESH
T ss_pred EECh
Confidence 9875
No 63
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=67.83 E-value=53 Score=28.64 Aligned_cols=66 Identities=8% Similarity=0.048 Sum_probs=40.9
Q ss_pred CCc-hhHHHHHHhCCCCEEEEEccCCCchh-------------HHHhhhcccCCCeeeceEecCCCCCCCCHHHHHHHHH
Q 024250 156 SNF-NDIIHSIIDMDADVITIENSRSDEKL-------------LSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRIN 221 (270)
Q Consensus 156 g~~-~~~~~~l~~~~vd~l~ld~~~~~~~~-------------l~~l~~~~~~~~~l~~GvVd~~~~~~e~~e~v~~~i~ 221 (270)
|.. .+.+..|.+.++|.++++... +.+. ++.++.....|..+..+++-+. .++.+++.+.++
T Consensus 155 G~l~~e~l~~L~~aGvd~v~i~les-~~e~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~I~Gl---~et~ed~~~~l~ 230 (369)
T 1r30_A 155 GTLSESQAQRLANAGLDYYNHNLDT-SPEFYGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGL---GETVKDRAGLLL 230 (369)
T ss_dssp SSCCHHHHHHHHHHCCCEEECCCBS-CHHHHHHHCCSSCHHHHHHHHHHHHHHHCEEECCEEECS---SCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHCCCCEEeecCcC-CHHHHHHhCCCCCHHHHHHHHHHHHHcCCeeeeeeEeeC---CCCHHHHHHHHH
Confidence 543 467889999999999988754 3222 1222111011335667776664 478888888888
Q ss_pred HHhc
Q 024250 222 KMLA 225 (270)
Q Consensus 222 ~~~~ 225 (270)
.+.+
T Consensus 231 ~l~~ 234 (369)
T 1r30_A 231 QLAN 234 (369)
T ss_dssp HHHS
T ss_pred HHHh
Confidence 7754
No 64
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=66.53 E-value=47 Score=29.42 Aligned_cols=27 Identities=19% Similarity=0.220 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCCEEEecc
Q 024250 85 CYQIALAIKDEVEDLEKAGINVIQIDE 111 (270)
Q Consensus 85 ~~~l~~~~~~~~~~l~~~G~~~IQiDE 111 (270)
++.+.+.+.+.++.+.++|++.|+|+-
T Consensus 162 I~~~i~~f~~AA~~a~~aGfDgVEih~ 188 (376)
T 1icp_A 162 IPQIVNEFRVAARNAIEAGFDGVEIHG 188 (376)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEcC
Confidence 455666677777778889999999984
No 65
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=65.37 E-value=8.3 Score=33.17 Aligned_cols=61 Identities=20% Similarity=0.265 Sum_probs=37.0
Q ss_pred HHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCch-hHHHHHHhCCCCEE
Q 024250 95 EVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFN-DIIHSIIDMDADVI 173 (270)
Q Consensus 95 ~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~-~~~~~l~~~~vd~l 173 (270)
++++..++|+++|++|.+... . ...+++.++ +.+ .+-.. |+.+ +.+..+.++++|.|
T Consensus 210 ea~eAl~aGaD~I~LDn~~~~-----------~-l~~av~~~~-------~~v--~ieaS-GGIt~~~i~~~a~tGVD~I 267 (287)
T 3tqv_A 210 ELNQAIAAKADIVMLDNFSGE-----------D-IDIAVSIAR-------GKV--ALEVS-GNIDRNSIVAIAKTGVDFI 267 (287)
T ss_dssp HHHHHHHTTCSEEEEESCCHH-----------H-HHHHHHHHT-------TTC--EEEEE-SSCCTTTHHHHHTTTCSEE
T ss_pred HHHHHHHcCCCEEEEcCCCHH-----------H-HHHHHHhhc-------CCc--eEEEE-CCCCHHHHHHHHHcCCCEE
Confidence 455556789999999984332 1 222232221 112 33344 5443 57788999999999
Q ss_pred EEEc
Q 024250 174 TIEN 177 (270)
Q Consensus 174 ~ld~ 177 (270)
++=.
T Consensus 268 svGa 271 (287)
T 3tqv_A 268 SVGA 271 (287)
T ss_dssp ECSH
T ss_pred EECh
Confidence 9853
No 66
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=64.53 E-value=51 Score=29.19 Aligned_cols=27 Identities=11% Similarity=0.310 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHHHcCCCEEEecc
Q 024250 85 CYQIALAIKDEVEDLEKAGINVIQIDE 111 (270)
Q Consensus 85 ~~~l~~~~~~~~~~l~~~G~~~IQiDE 111 (270)
++.+.+.+.+.++...++|++.|+|+-
T Consensus 161 I~~~i~~f~~aA~~a~~aGfDgVEIh~ 187 (377)
T 2r14_A 161 IPGIVEDYRQAAQRAKRAGFDMVEVHA 187 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEcC
Confidence 355666666767777889999999974
No 67
>2bmb_A Folic acid synthesis protein FOL1; folate biosynthesis, transferase, ligase, multifunctional enzyme; HET: PMM; 2.3A {Saccharomyces cerevisiae}
Probab=62.99 E-value=1e+02 Score=28.92 Aligned_cols=93 Identities=13% Similarity=0.174 Sum_probs=53.6
Q ss_pred HHHHHHHHHHcC-----CCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcC-CC--CCceEEEeeccCCchhHHH
Q 024250 92 IKDEVEDLEKAG-----INVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCG-VQ--DTTQIHTHMCYSNFNDIIH 163 (270)
Q Consensus 92 ~~~~~~~l~~~G-----~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~i~lH~c~g~~~~~~~ 163 (270)
..+.++++.+.| |++|=|---+-..+. ..-+.++.++.+++.++.+.+. .+ .++.+.+-|+. . .+.+
T Consensus 251 al~~a~~mv~~G~~~~~AdIIDIGgeSTRPGa--~~vs~eEEl~RvvpvI~~i~~~~~~~~~~vpISIDT~~--a-~Vae 325 (545)
T 2bmb_A 251 QLNDIIKLCKDALYLHESVIIDVGGCSTRPNS--IQASEEEEIRRSIPLIKAIRESTELPQDKVILSIDTYR--S-NVAK 325 (545)
T ss_dssp HHHHHHHHHHHHHTTCSCEEEEEECSCCSTTC--CCCCHHHHHHHHHHHHHHHHHCSSSCGGGEEEEEECCC--H-HHHH
T ss_pred HHHHHHHHHHcCCCCCCceEEEECCCCCCCCC--CCCCHHHHHHHHHHHHHHHHhhccccCCCCeEEEeCCc--H-HHHH
Confidence 334467778889 998766532211110 1114566788888888887541 11 13456666662 2 5677
Q ss_pred HHHhCCCCEEEEEccC--CCchhHHHhhh
Q 024250 164 SIIDMDADVITIENSR--SDEKLLSVFRE 190 (270)
Q Consensus 164 ~l~~~~vd~l~ld~~~--~~~~~l~~l~~ 190 (270)
..++++++.|. |... .+.+.+...++
T Consensus 326 aAl~aGadIIN-DVsg~~~d~~m~~vva~ 353 (545)
T 2bmb_A 326 EAIKVGVDIIN-DISGGLFDSNMFAVIAE 353 (545)
T ss_dssp HHHHTTCCEEE-ETTTTSSCTTHHHHHHT
T ss_pred HHHHcCCCEEE-eCCCCcCChHHHHHHHH
Confidence 88888998874 3322 23445565555
No 68
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=62.89 E-value=69 Score=28.16 Aligned_cols=27 Identities=15% Similarity=0.352 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCCEEEecc
Q 024250 85 CYQIALAIKDEVEDLEKAGINVIQIDE 111 (270)
Q Consensus 85 ~~~l~~~~~~~~~~l~~~G~~~IQiDE 111 (270)
+..+.+.+.+.++.+.++|++.|+|+-
T Consensus 156 I~~~i~~f~~aA~~a~~aGfDgVeih~ 182 (364)
T 1vyr_A 156 IPGIVNDFRQAVANAREAGFDLVELHS 182 (364)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEcC
Confidence 355566666677777889999999864
No 69
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=62.80 E-value=85 Score=28.06 Aligned_cols=93 Identities=15% Similarity=0.163 Sum_probs=54.6
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHcCCC--EEEe-ccCccccCCCCCCccHHHH---HHHHHHHHHHHhcCCCCCceEEEee
Q 024250 80 PRHETCYQIALAIKDEVEDLEKAGIN--VIQI-DEAALREGLPLRKSEHAFY---LDWAVHSFRITNCGVQDTTQIHTHM 153 (270)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~l~~~G~~--~IQi-DEP~l~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~lH~ 153 (270)
+..++...+.+.....++.|.+.|+. +||+ .|+.... .+ ...++.+ +..+..+++.+.. +.+|.+|.
T Consensus 131 ~~~~l~~~~~~yt~~~l~~l~~~g~~~~~vqvGNEi~~g~-~~--~~~~~~la~ll~ag~~aVR~v~p----~~~V~ih~ 203 (399)
T 1ur4_A 131 NFEDKKTALYQYTKQSLKAMKAAGIDIGMVQVGNETNGGL-AG--ETDWAKMSQLFNAGSQAVRETDS----NILVALHF 203 (399)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEESSSCSSCB-TT--BCCHHHHHHHHHHHHHHHHHHCT----TSEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEcccccccc-CC--cccHHHHHHHHHHHHHHHHHhCC----CCeEEEEe
Confidence 45677777777777778888888864 5654 6776543 11 1234444 3333444444432 35688999
Q ss_pred ccCCch----hHHHHHHhC--CCCEEEEEccC
Q 024250 154 CYSNFN----DIIHSIIDM--DADVITIENSR 179 (270)
Q Consensus 154 c~g~~~----~~~~~l~~~--~vd~l~ld~~~ 179 (270)
|.|.-. -.++.|... .+|.|++.+..
T Consensus 204 ~~~~~~~~~~~~~d~l~~~g~d~DvIG~syYp 235 (399)
T 1ur4_A 204 TNPETSGRYAWIAETLHRHHVDYDVFASSYYP 235 (399)
T ss_dssp CCTTSTTHHHHHHHHHHHTTCCCSEEEEEECT
T ss_pred CCCcchHHHHHHHHHHHHcCCCcCeEeEecCc
Confidence 976321 234555443 47888887653
No 70
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=61.71 E-value=58 Score=26.59 Aligned_cols=85 Identities=9% Similarity=0.152 Sum_probs=45.9
Q ss_pred HHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHHHHHhCCCCEE
Q 024250 94 DEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVI 173 (270)
Q Consensus 94 ~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~~l~~~~vd~l 173 (270)
+.++++.+.|+++||+.+-.. .. .+.++.+.+..+ +..++..+.. ..+..+...++++|.+
T Consensus 42 ~~~~al~~gGv~~iel~~k~~---------~~-------~~~i~~l~~~~~-~~~igagtvl--~~d~~~~A~~aGAd~v 102 (225)
T 1mxs_A 42 PLADALAAGGIRTLEVTLRSQ---------HG-------LKAIQVLREQRP-ELCVGAGTVL--DRSMFAAVEAAGAQFV 102 (225)
T ss_dssp HHHHHHHHTTCCEEEEESSST---------HH-------HHHHHHHHHHCT-TSEEEEECCC--SHHHHHHHHHHTCSSE
T ss_pred HHHHHHHHCCCCEEEEecCCc---------cH-------HHHHHHHHHhCc-ccEEeeCeEe--eHHHHHHHHHCCCCEE
Confidence 346667789999999985321 11 123333333333 2333334432 2356778889999999
Q ss_pred EEEccCCCchhHHHhhhcccCCCeeeceE
Q 024250 174 TIENSRSDEKLLSVFREGVKYGAGIGPGV 202 (270)
Q Consensus 174 ~ld~~~~~~~~l~~l~~~~~~~~~l~~Gv 202 (270)
+... .+.+..+..+.. +..+.+|+
T Consensus 103 ~~p~--~d~~v~~~~~~~---g~~~i~G~ 126 (225)
T 1mxs_A 103 VTPG--ITEDILEAGVDS---EIPLLPGI 126 (225)
T ss_dssp ECSS--CCHHHHHHHHHC---SSCEECEE
T ss_pred EeCC--CCHHHHHHHHHh---CCCEEEee
Confidence 8542 234443444432 33455563
No 71
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=61.63 E-value=81 Score=27.41 Aligned_cols=144 Identities=8% Similarity=0.025 Sum_probs=71.4
Q ss_pred HHHHHHH-HcCCCEEEec-cCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCch---hHHHHHHhC
Q 024250 94 DEVEDLE-KAGINVIQID-EAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFN---DIIHSIIDM 168 (270)
Q Consensus 94 ~~~~~l~-~~G~~~IQiD-EP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~---~~~~~l~~~ 168 (270)
+..+++. +.|+++|-|- |-.- ......+.+++.+ +++.+. +..+ +++.|--| ||-+ ++++..++.
T Consensus 84 ~~A~~~v~~~GAdiIDIg~eStr---P~~~~vs~ee~~~-~V~~v~---~~~~--vPlsIDg~-~~~T~~~eV~eaAlea 153 (323)
T 4djd_D 84 RWAQKCVAEYGADLIYLKLDGAD---PEGANHSVDQCVA-TVKEVL---QAVG--VPLVVVGC-GDVEKDHEVLEAVAEA 153 (323)
T ss_dssp HHHHHHHHTTCCSEEEEECGGGC---TTTTCCCHHHHHH-HHHHHH---HHCC--SCEEEECC-SCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEcCccCC---CCCCCCCHHHHHH-HHHHHH---hhCC--ceEEEECC-CCCCCCHHHHHHHHHh
Confidence 3344455 7899998774 3111 1111112333322 233333 3232 56777767 6654 456666666
Q ss_pred CCCE--EEEEccC-CCchhHHHhhhcccCCCeeeceEecCCCCCCCCHHHHHHHHHHHhcc-ccCCceEecCCCCCCCCC
Q 024250 169 DADV--ITIENSR-SDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAV-LETNILWVNPDCGLKTRK 244 (270)
Q Consensus 169 ~vd~--l~ld~~~-~~~~~l~~l~~~~~~~~~l~~GvVd~~~~~~e~~e~v~~~i~~~~~~-~~~~~l~vsp~Cgl~~~~ 244 (270)
..+. +--+... +..+.+...+++ +-.+++-- . .+.+.+.++++.+.+. ++++++++.|.+|--+.+
T Consensus 154 gag~~~lINsv~~~~~~~m~~laa~~---g~~vVlmh--~-----~d~~~~~~l~~~a~~~GI~~e~IIlDPg~g~fgk~ 223 (323)
T 4djd_D 154 AAGENLLLGNAEQENYKSLTAACMVH---KHNIIARS--P-----LDINICKQLNILINEMNLPLDHIVIDPSIGGLGYG 223 (323)
T ss_dssp TTTSCCEEEEEBTTBCHHHHHHHHHH---TCEEEEEC--S-----SCHHHHHHHHHHHHTTTCCGGGEEEECCCCCTTTT
T ss_pred cCCCCCeEEECCcccHHHHHHHHHHh---CCeEEEEc--c-----chHHHHHHHHHHHHHcCCCHHHEEEeCCCccccCC
Confidence 6441 2223222 123444555554 22232211 1 1355555555555543 456899999999933346
Q ss_pred HhHHHHHHHHHHH
Q 024250 245 YTEVKPALSNMVA 257 (270)
Q Consensus 245 ~~~a~~kL~~l~~ 257 (270)
.+.+.+.|+.+.+
T Consensus 224 ~e~~l~~l~~ir~ 236 (323)
T 4djd_D 224 IEYSFSIMERIRL 236 (323)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 6655555555544
No 72
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=60.63 E-value=90 Score=27.61 Aligned_cols=124 Identities=13% Similarity=0.143 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHHHHHhCCC
Q 024250 91 AIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDA 170 (270)
Q Consensus 91 ~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~~l~~~~v 170 (270)
+..+.+++|.++||++|-+-=|... . .+++..+.+..+ ++++.-+=| |+. ..-...+.++
T Consensus 47 atv~Qi~~l~~aG~diVRvavp~~~-------------~---a~al~~I~~~~~--vPlvaDiHf-~~~-lal~a~e~G~ 106 (366)
T 3noy_A 47 ATLNQIKRLYEAGCEIVRVAVPHKE-------------D---VEALEEIVKKSP--MPVIADIHF-APS-YAFLSMEKGV 106 (366)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCSHH-------------H---HHHHHHHHHHCS--SCEEEECCS-CHH-HHHHHHHTTC
T ss_pred HHHHHHHHHHHcCCCEEEeCCCChH-------------H---HHHHHHHHhcCC--CCEEEeCCC-CHH-HHHHHHHhCC
Confidence 4556688899999999988644211 1 234444433343 344443333 453 2334578899
Q ss_pred CEEEEEccC-CCc----hhHHHhhhcccCCCeeeceEecCCCC------C-CCCHHHHHHHHHHH---hccccCCceEec
Q 024250 171 DVITIENSR-SDE----KLLSVFREGVKYGAGIGPGVYDIHSP------R-IPSTEEIADRINKM---LAVLETNILWVN 235 (270)
Q Consensus 171 d~l~ld~~~-~~~----~~l~~l~~~~~~~~~l~~GvVd~~~~------~-~e~~e~v~~~i~~~---~~~~~~~~l~vs 235 (270)
|.+.+.--+ ++. +..+..++ .+..+-+||=.++-. + -.+++..++...+. ++.++-+++++|
T Consensus 107 dklRINPGNig~~~~~~~vv~~ak~---~~~piRIGvN~GSL~~~ll~~yg~~~~eamVeSAl~~~~~~e~~gf~~iviS 183 (366)
T 3noy_A 107 HGIRINPGNIGKEEIVREIVEEAKR---RGVAVRIGVNSGSLEKDLLEKYGYPSAEALAESALRWSEKFEKWGFTNYKVS 183 (366)
T ss_dssp SEEEECHHHHSCHHHHHHHHHHHHH---HTCEEEEEEEGGGCCHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred CeEEECCcccCchhHHHHHHHHHHH---cCCCEEEecCCcCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHhCCCCeEEEe
Confidence 999998644 222 22333444 367888887444321 1 25666544443332 233455777766
Q ss_pred CC
Q 024250 236 PD 237 (270)
Q Consensus 236 p~ 237 (270)
.-
T Consensus 184 ~K 185 (366)
T 3noy_A 184 IK 185 (366)
T ss_dssp EE
T ss_pred ee
Confidence 53
No 73
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=60.52 E-value=21 Score=28.66 Aligned_cols=68 Identities=13% Similarity=0.041 Sum_probs=36.7
Q ss_pred HHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHHHHHhCCCCEE
Q 024250 94 DEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVI 173 (270)
Q Consensus 94 ~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~~l~~~~vd~l 173 (270)
+.++++.+.|+++||++++..+. ..... .......+.++.... ++.+.++ + .++...++++|++
T Consensus 35 ~~~~~~~~~G~~~i~l~~~~~~~------~~~~~-~~~~~~~l~~~~~~~--~v~v~v~----~---~~~~a~~~gad~v 98 (227)
T 2tps_A 35 TVVQKALKGGATLYQFREKGGDA------LTGEA-RIKFAEKAQAACREA--GVPFIVN----D---DVELALNLKADGI 98 (227)
T ss_dssp HHHHHHHHHTCSEEEECCCSTTC------CCHHH-HHHHHHHHHHHHHHH--TCCEEEE----S---CHHHHHHHTCSEE
T ss_pred HHHHHHHHCCCCEEEEecCCCCH------hHHHH-HHHHHHHHHHHHHHc--CCeEEEc----C---HHHHHHHcCCCEE
Confidence 44666778899999999876431 12100 011222233332221 1334443 1 2466788899999
Q ss_pred EEEc
Q 024250 174 TIEN 177 (270)
Q Consensus 174 ~ld~ 177 (270)
++..
T Consensus 99 ~l~~ 102 (227)
T 2tps_A 99 HIGQ 102 (227)
T ss_dssp EECT
T ss_pred EECC
Confidence 8854
No 74
>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ...
Probab=60.43 E-value=22 Score=30.77 Aligned_cols=90 Identities=18% Similarity=0.082 Sum_probs=50.6
Q ss_pred ceEEEeec-cC-CchhHHHHHHhCCCC--EEEEEcc--CCCchhHHHhhhcccCCCeeeceEecCCCCC-----------
Q 024250 147 TQIHTHMC-YS-NFNDIIHSIIDMDAD--VITIENS--RSDEKLLSVFREGVKYGAGIGPGVYDIHSPR----------- 209 (270)
Q Consensus 147 ~~i~lH~c-~g-~~~~~~~~l~~~~vd--~l~ld~~--~~~~~~l~~l~~~~~~~~~l~~GvVd~~~~~----------- 209 (270)
.++++|+. .| +..+.+..|.+.+++ .+.+... ..+.+....+.+ .|-.++++.. +..+.
T Consensus 162 lPv~iH~~~~~r~a~e~l~iL~~~g~~~~~~~i~H~f~~~~~e~a~~~~~---~G~~i~~~~~-G~~tf~~~~~~~~~~~ 237 (330)
T 2ob3_A 162 VPVTTHTAASQRDGEQQAAIFESEGLSPSRVCIGHSDDTDDLSYLTALAA---RGYLIGLDHI-PYSAIGLEDNASASAL 237 (330)
T ss_dssp CCEEEECCGGGTHHHHHHHHHHHTTCCGGGEEECSGGGCCCHHHHHHHHH---TTCEEEECCT-TCCCTTCTTCHHHHHH
T ss_pred CeEEEECCCCCCCHHHHHHHHHHcCcCcccEEEeCCCCCCCHHHHHHHHh---CCCEEEeCCC-cccccccccccccccc
Confidence 46889974 11 112567777776764 3333332 223444444443 3556666531 11111
Q ss_pred --CCCHHHHHHHHHHHhccccCCceEecCCCCC
Q 024250 210 --IPSTEEIADRINKMLAVLETNILWVNPDCGL 240 (270)
Q Consensus 210 --~e~~e~v~~~i~~~~~~~~~~~l~vsp~Cgl 240 (270)
..+.+.-.+.++++++..+.+++++++||+.
T Consensus 238 ~~~~~~~~~~~~l~~~~~~~p~drilleTD~p~ 270 (330)
T 2ob3_A 238 LGIRSWQTRALLIKALIDQGYMKQILVSNDWTF 270 (330)
T ss_dssp HCSSCHHHHHHHHHHHHHTTCGGGEEECCCCCS
T ss_pred ccCCCHHHHHHHHHHHHHhCCCCeEEEeCCCCC
Confidence 1233445566888888888899999999985
No 75
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=60.33 E-value=66 Score=25.96 Aligned_cols=83 Identities=17% Similarity=0.202 Sum_probs=43.6
Q ss_pred HHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHHHHHhCCCCEEE
Q 024250 95 EVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVIT 174 (270)
Q Consensus 95 ~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~~l~~~~vd~l~ 174 (270)
.++++.+.|+++||+.+-.. .. .+.++.+.+..+. ..+...+.. ..+-.+...++++|.++
T Consensus 33 ~~~al~~gGv~~iel~~k~~---------~~-------~~~i~~l~~~~~~-~~vgagtvi--~~d~~~~A~~aGAd~v~ 93 (214)
T 1wbh_A 33 MAKALVAGGVRVLNVTLRTE---------CA-------VDAIRAIAKEVPE-AIVGAGTVL--NPQQLAEVTEAGAQFAI 93 (214)
T ss_dssp HHHHHHHTTCCEEEEESCST---------TH-------HHHHHHHHHHCTT-SEEEEESCC--SHHHHHHHHHHTCSCEE
T ss_pred HHHHHHHcCCCEEEEeCCCh---------hH-------HHHHHHHHHHCcC-CEEeeCEEE--EHHHHHHHHHcCCCEEE
Confidence 45667788999999996321 11 1233333233331 223322321 13567788889999998
Q ss_pred EEccCCCchhHHHhhhcccCCCeeece
Q 024250 175 IENSRSDEKLLSVFREGVKYGAGIGPG 201 (270)
Q Consensus 175 ld~~~~~~~~l~~l~~~~~~~~~l~~G 201 (270)
... .+.+..+..+.. +..+.+|
T Consensus 94 ~p~--~d~~v~~~~~~~---g~~~i~G 115 (214)
T 1wbh_A 94 SPG--LTEPLLKAATEG---TIPLIPG 115 (214)
T ss_dssp ESS--CCHHHHHHHHHS---SSCEEEE
T ss_pred cCC--CCHHHHHHHHHh---CCCEEEe
Confidence 653 234433444432 3344456
No 76
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=60.20 E-value=52 Score=29.48 Aligned_cols=27 Identities=19% Similarity=0.208 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHHHHHcCCCEEEecc
Q 024250 85 CYQIALAIKDEVEDLEKAGINVIQIDE 111 (270)
Q Consensus 85 ~~~l~~~~~~~~~~l~~~G~~~IQiDE 111 (270)
++.+.+.+.+.++.+.++|++.|+|.-
T Consensus 166 I~~ii~~f~~AA~~a~~AGfDgVEIh~ 192 (402)
T 2hsa_B 166 ISQVVEDYRRSALNAIEAGFDGIEIHG 192 (402)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEECC
Confidence 456667777777778889999999985
No 77
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=60.16 E-value=63 Score=27.44 Aligned_cols=122 Identities=12% Similarity=0.005 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHH---HHHH
Q 024250 90 LAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDII---HSII 166 (270)
Q Consensus 90 ~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~---~~l~ 166 (270)
+.++++++.+.+.|++-|.+--- -+....+ + .++-.+.++.+.+...+.++++.++...+..+.+ ....
T Consensus 24 ~~l~~lv~~li~~Gv~gl~~~Gt-tGE~~~L---s----~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~ 95 (294)
T 3b4u_A 24 DAMIAHARRCLSNGCDSVTLFGT-TGEGCSV---G----SRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEAL 95 (294)
T ss_dssp HHHHHHHHHHHHTTCSEEEESST-TTTGGGS---C----HHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECcc-ccChhhC---C----HHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHH
Confidence 46777788888999997655310 0000001 1 1222334444444444456788888754555444 3456
Q ss_pred hCCCCEEEEEc--cCC--Cc-hhHHHhhhcc-cC---CCeeeceEecCCCCCCCCHHHHHHH
Q 024250 167 DMDADVITIEN--SRS--DE-KLLSVFREGV-KY---GAGIGPGVYDIHSPRIPSTEEIADR 219 (270)
Q Consensus 167 ~~~vd~l~ld~--~~~--~~-~~l~~l~~~~-~~---~~~l~~GvVd~~~~~~e~~e~v~~~ 219 (270)
++++|++.+=. ... +. +..+.++... .. +..+.+=.+++++-..=+++.+.+.
T Consensus 96 ~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~p~~~lPiilYn~P~~tg~~l~~~~~~~L 157 (294)
T 3b4u_A 96 NAGARNILLAPPSYFKNVSDDGLFAWFSAVFSKIGKDARDILVYNIPSVTMVTLSVELVGRL 157 (294)
T ss_dssp HTTCSEEEECCCCSSCSCCHHHHHHHHHHHHHHHCTTCCCEEEEECHHHHSCCCCHHHHHHH
T ss_pred hcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCCCcEEEEECcchhCcCCCHHHHHHH
Confidence 79999998753 212 22 2334443321 11 3345555555544333355555444
No 78
>2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15
Probab=59.83 E-value=72 Score=26.23 Aligned_cols=94 Identities=7% Similarity=-0.075 Sum_probs=50.8
Q ss_pred ceEEEeeccCCchhHHHHHHhCCCCEEEEEccCCCc-------hhHHHhhhcccCCCeeeceEe--cCCCCC-CCCHHHH
Q 024250 147 TQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDE-------KLLSVFREGVKYGAGIGPGVY--DIHSPR-IPSTEEI 216 (270)
Q Consensus 147 ~~i~lH~c~g~~~~~~~~l~~~~vd~l~ld~~~~~~-------~~l~~l~~~~~~~~~l~~GvV--d~~~~~-~e~~e~v 216 (270)
.++.+|+-..+.....+.+.+.| -.+-++...... ..++.+.+.. ....+.+++- -..... ..+....
T Consensus 138 lpv~iH~~~~~~~~~~~~~~~~p-l~~vi~H~g~~~~~~~~~~~~~~~~~~l~-~~~n~y~~~sg~~~~~~~~~~~~~~~ 215 (288)
T 2ffi_A 138 WHVELHRQVADIPVLVRALQPYG-LDIVIDHFGRPDARRGLGQPGFAELLTLS-GRGKVWVKVSGIYRLQGSPEENLAFA 215 (288)
T ss_dssp CEEEECSCTTTHHHHHHHHTTTT-CCEEESGGGSCCTTSCTTCTTHHHHTTCC-CCSCEEEEEECGGGSSSCHHHHHHHH
T ss_pred CeEEEeechhhHHHHHHHHHHCC-CCEEEECCCCCCCCCCCCChhHHHHHHHH-hCCCEEEEeCcchhhccccCCCHHHH
Confidence 56788976444556677777788 446665432111 0123333221 1113444431 111111 0112344
Q ss_pred HHHHHHHhccccCCceEecCCCCCCC
Q 024250 217 ADRINKMLAVLETNILWVNPDCGLKT 242 (270)
Q Consensus 217 ~~~i~~~~~~~~~~~l~vsp~Cgl~~ 242 (270)
...++.+++.+|.+|++..+|+....
T Consensus 216 ~~~~~~~~~~~g~drll~gSD~P~~~ 241 (288)
T 2ffi_A 216 RQALCALEAHYGAERLMWGSDWPHTQ 241 (288)
T ss_dssp HHHHHHHHHHTCGGGEEEECCTTCTT
T ss_pred HHHHHHHHHHhCCCceEEecCCCCCC
Confidence 56678888888999999999998765
No 79
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=59.24 E-value=48 Score=27.81 Aligned_cols=138 Identities=10% Similarity=-0.036 Sum_probs=68.0
Q ss_pred HHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHHHHHhCCCCEE
Q 024250 94 DEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVI 173 (270)
Q Consensus 94 ~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~~l~~~~vd~l 173 (270)
++++++.+.|+.-|-++- .-....... + +...+.++.+.+ . +.++.+|+-...+.++.+.+.+.| -.+
T Consensus 109 ~eL~~l~~~gv~Gi~l~~-~~~~~~~~~--~-----~~~~~~~~~a~~-~--glpv~iH~~~~~l~~~~~~l~~~p-~~~ 176 (294)
T 4i6k_A 109 NELVNLKAQGIVGVRLNL-FGLNLPALN--T-----PDWQKFLRNVES-L--NWQVELHAPPKYLVQLLPQLNEYS-FDV 176 (294)
T ss_dssp HHHHHHHTTTEEEEEEEC-TTSCCCCSS--S-----HHHHHHHHHHHH-T--TCEEEEECCHHHHHHHHHHHTTSS-SCE
T ss_pred HHHHHHHHCCCcEEEecc-CCCCCCCcc--c-----HHHHHHHHHHHH-c--CCEEEEeeCcchHHHHHHHHHHCC-CCE
Confidence 456667777877676652 111000111 1 222333333322 2 367888865322345666677777 346
Q ss_pred EEEccCCC-------chhHHHhhhcccCCCeeeceE--ecCCCCCCCCHHHHHHHHHHHhccccCCceEecCCCCCCCCC
Q 024250 174 TIENSRSD-------EKLLSVFREGVKYGAGIGPGV--YDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRK 244 (270)
Q Consensus 174 ~ld~~~~~-------~~~l~~l~~~~~~~~~l~~Gv--Vd~~~~~~e~~e~v~~~i~~~~~~~~~~~l~vsp~Cgl~~~~ 244 (270)
-++..... .+..+.+.+.. ....+.+++ +-+.+..-.........++++++.+|++|++..+|+.+....
T Consensus 177 Vi~H~g~p~~~~g~~~~~~~~~~~l~-~~~nv~~k~Sg~~~~~~~~~~~~~~~~~l~~~~~~~g~dRll~gSD~P~~~~~ 255 (294)
T 4i6k_A 177 VIDHFGRVDPVKGIEDPDYQKFLSLL-NVKQHWIKVSGFYRLGATPSNINIAQQAYNIFKEKGFLHKLIWGSDWPHTQHE 255 (294)
T ss_dssp EESGGGCCCTTTCTTCHHHHHHHHHC-CTTTEEEECCCGGGSSSTTHHHHHHHHHHHHHHHHTCGGGEECCCCBTCTTCT
T ss_pred EEECCCCCCCCCCCCCHHHHHHHHHH-hCCCEEEEecccccccccCCCchhhHHHHHHHHHHhCcccEEEeCCCCCCCCc
Confidence 66653321 01122222211 111233332 111111111223455678888888899999999999887653
No 80
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=58.82 E-value=31 Score=28.05 Aligned_cols=70 Identities=6% Similarity=0.042 Sum_probs=39.3
Q ss_pred HHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHHHHHhCCCCEEEE
Q 024250 96 VEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITI 175 (270)
Q Consensus 96 ~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~~l~~~~vd~l~l 175 (270)
++.+.++|+++|++++-..... ... . + +.++++.+..+ .++.+|--..+. +.++.++++++|.+.+
T Consensus 37 a~~~~~~Gad~i~v~~~d~~~~--~~~-~---~-----~~i~~i~~~~~--ipv~v~ggi~~~-~~~~~~l~~Gad~V~l 102 (244)
T 2y88_A 37 ALGWQRDGAEWIHLVDLDAAFG--RGS-N---H-----ELLAEVVGKLD--VQVELSGGIRDD-ESLAAALATGCARVNV 102 (244)
T ss_dssp HHHHHHTTCSEEEEEEHHHHTT--SCC-C---H-----HHHHHHHHHCS--SEEEEESSCCSH-HHHHHHHHTTCSEEEE
T ss_pred HHHHHHcCCCEEEEEcCccccc--CCC-h---H-----HHHHHHHHhcC--CcEEEECCCCCH-HHHHHHHHcCCCEEEE
Confidence 3456788999999987332211 000 1 1 22222222222 456666332233 3467888899999999
Q ss_pred EccC
Q 024250 176 ENSR 179 (270)
Q Consensus 176 d~~~ 179 (270)
-...
T Consensus 103 g~~~ 106 (244)
T 2y88_A 103 GTAA 106 (244)
T ss_dssp CHHH
T ss_pred CchH
Confidence 8743
No 81
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=58.64 E-value=13 Score=32.03 Aligned_cols=61 Identities=18% Similarity=0.347 Sum_probs=37.1
Q ss_pred HHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCch-hHHHHHHhCCCCEE
Q 024250 95 EVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFN-DIIHSIIDMDADVI 173 (270)
Q Consensus 95 ~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~-~~~~~l~~~~vd~l 173 (270)
++++..++|+++|++|...+. . +. ++.+.+ .. ++.+-.. |+.+ +.+..+.++++|.|
T Consensus 221 e~~eAl~aGaD~I~LDn~~~~-----------~-l~---~av~~i----~~--~v~ieaS-GGI~~~~i~~~a~tGVD~i 278 (298)
T 3gnn_A 221 QLRTALAHGARSVLLDNFTLD-----------M-MR---DAVRVT----EG--RAVLEVS-GGVNFDTVRAIAETGVDRI 278 (298)
T ss_dssp HHHHHHHTTCEEEEEESCCHH-----------H-HH---HHHHHH----TT--SEEEEEE-SSCSTTTHHHHHHTTCSEE
T ss_pred HHHHHHHcCCCEEEECCCCHH-----------H-HH---HHHHHh----CC--CCeEEEE-cCCCHHHHHHHHHcCCCEE
Confidence 455556689999999974332 1 22 222222 11 2334444 5553 56788999999999
Q ss_pred EEEc
Q 024250 174 TIEN 177 (270)
Q Consensus 174 ~ld~ 177 (270)
++=.
T Consensus 279 svG~ 282 (298)
T 3gnn_A 279 SIGA 282 (298)
T ss_dssp ECGG
T ss_pred EECC
Confidence 8765
No 82
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=58.46 E-value=73 Score=27.99 Aligned_cols=27 Identities=15% Similarity=0.229 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHHHHHcCCCEEEecc
Q 024250 85 CYQIALAIKDEVEDLEKAGINVIQIDE 111 (270)
Q Consensus 85 ~~~l~~~~~~~~~~l~~~G~~~IQiDE 111 (270)
++.+.+.+.+.++.+.++|++.|+|+-
T Consensus 156 I~~~i~~f~~aA~~a~~aGfDgVeih~ 182 (365)
T 2gou_A 156 IAQVIADYRQAALNAMEAGFDGIELHA 182 (365)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEec
Confidence 456667777777778889999999974
No 83
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304}
Probab=57.20 E-value=13 Score=31.20 Aligned_cols=83 Identities=16% Similarity=0.133 Sum_probs=43.9
Q ss_pred ceEEEeeccCC----chhHHHHHHhCCCC--EEEEEccCCCchhHHHhhhcccCCCeeeceEecCCCCCCCCHHHHHHHH
Q 024250 147 TQIHTHMCYSN----FNDIIHSIIDMDAD--VITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRI 220 (270)
Q Consensus 147 ~~i~lH~c~g~----~~~~~~~l~~~~vd--~l~ld~~~~~~~~l~~l~~~~~~~~~l~~GvVd~~~~~~e~~e~v~~~i 220 (270)
.++.+|+-.++ ..+.++.|.+.+++ ...+-.. +.+..+.+.+ .|-.+++|+..+.-+.. +.
T Consensus 124 lPv~iH~r~~~~~~a~~~~~~il~~~~~~~~~~vi~H~--~~~~a~~~l~---~G~yis~~~~pg~~t~~--------~~ 190 (261)
T 3guw_A 124 VPCIIHTPRGNKLKATRKTLEILESLDFPADLAVIDHV--NFETLDMVLE---TEYWIGLTVQPGKLSAE--------DA 190 (261)
T ss_dssp CCEEEECCSSSTTHHHHHHHHHHHHTTCCTTSEEEESC--CTTTHHHHHT---SSSEEEEECC---------------CC
T ss_pred CeEEEEcCCCcccchHHHHHHHHHHcCCCCCCEEEEeC--CHHHHHHHHh---CCEEEEecCCCCcccHH--------HH
Confidence 56889975321 45788888876543 1222112 2333344443 35566665322211111 11
Q ss_pred HHHhccccCCceEecCCCCCCC
Q 024250 221 NKMLAVLETNILWVNPDCGLKT 242 (270)
Q Consensus 221 ~~~~~~~~~~~l~vsp~Cgl~~ 242 (270)
+++++.+|.+++++.+||...+
T Consensus 191 ~~~v~~ipldrlLlETD~P~~p 212 (261)
T 3guw_A 191 ARIVAEHGPERFMLNSDAGYRD 212 (261)
T ss_dssp TTGGGGCC-CCEEEECCCCCC-
T ss_pred HHHHHhCCcceEEEecCCCCCC
Confidence 4567788999999999999854
No 84
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=56.94 E-value=17 Score=31.68 Aligned_cols=61 Identities=21% Similarity=0.302 Sum_probs=36.6
Q ss_pred HHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCch-hHHHHHHhCCCCEE
Q 024250 95 EVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFN-DIIHSIIDMDADVI 173 (270)
Q Consensus 95 ~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~-~~~~~l~~~~vd~l 173 (270)
++++..++|+++|++|.+.+. .+..+++.++ +.+. +-.. |+.+ +.+..+.++++|.|
T Consensus 243 ea~eAl~aGaD~I~LDn~~~~------------~l~~av~~l~-------~~v~--ieaS-GGIt~~~I~~~a~tGVD~i 300 (320)
T 3paj_A 243 ELEEAISAGADIIMLDNFSLE------------MMREAVKINA-------GRAA--LENS-GNITLDNLKECAETGVDYI 300 (320)
T ss_dssp HHHHHHHTTCSEEEEESCCHH------------HHHHHHHHHT-------TSSE--EEEE-SSCCHHHHHHHHTTTCSEE
T ss_pred HHHHHHHcCCCEEEECCCCHH------------HHHHHHHHhC-------CCCe--EEEE-CCCCHHHHHHHHHcCCCEE
Confidence 455555689999999984321 1233333222 1232 3334 5553 57788999999999
Q ss_pred EEEc
Q 024250 174 TIEN 177 (270)
Q Consensus 174 ~ld~ 177 (270)
++=.
T Consensus 301 svGa 304 (320)
T 3paj_A 301 SVGA 304 (320)
T ss_dssp ECTH
T ss_pred EECc
Confidence 8743
No 85
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=55.75 E-value=24 Score=29.33 Aligned_cols=24 Identities=17% Similarity=0.326 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHcCCCEEEeccCcc
Q 024250 91 AIKDEVEDLEKAGINVIQIDEAAL 114 (270)
Q Consensus 91 ~~~~~~~~l~~~G~~~IQiDEP~l 114 (270)
...+.++.+.++|+++|+++-|.-
T Consensus 33 ~~~~~~~~l~~~Gad~ielg~p~~ 56 (262)
T 1rd5_A 33 TTAEALRLLDGCGADVIELGVPCS 56 (262)
T ss_dssp HHHHHHHHHHHTTCSSEEEECCCS
T ss_pred HHHHHHHHHHHcCCCEEEECCCCC
Confidence 344557778899999999998864
No 86
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=55.03 E-value=92 Score=25.95 Aligned_cols=73 Identities=21% Similarity=0.328 Sum_probs=39.2
Q ss_pred hHHHHHHhCC-CCEEEEEccCCCchhHHHhhhcc-cCCCeeeceEecCCCC-CCCCHHHHHHHHHHHhccccCCc--eEe
Q 024250 160 DIIHSIIDMD-ADVITIENSRSDEKLLSVFREGV-KYGAGIGPGVYDIHSP-RIPSTEEIADRINKMLAVLETNI--LWV 234 (270)
Q Consensus 160 ~~~~~l~~~~-vd~l~ld~~~~~~~~l~~l~~~~-~~~~~l~~GvVd~~~~-~~e~~e~v~~~i~~~~~~~~~~~--l~v 234 (270)
..+..+.+.+ +|.+.+|+... .+..+.+.+.. ..+..+ |++.++- ...+.+++.+++.+..+ .+++. +.+
T Consensus 103 ~ll~~~~~~~~~d~iDvEl~~~-~~~~~~l~~~a~~~~~ki---I~S~Hdf~~TP~~~el~~~~~~~~~-~gaDIvKia~ 177 (258)
T 4h3d_A 103 TLNKEISNTGLVDLIDVELFMG-DEVIDEVVNFAHKKEVKV---IISNHDFNKTPKKEEIVSRLCRMQE-LGADLPKIAV 177 (258)
T ss_dssp HHHHHHHHTTCCSEEEEEGGGC-HHHHHHHHHHHHHTTCEE---EEEEEESSCCCCHHHHHHHHHHHHH-TTCSEEEEEE
T ss_pred HHHHHHHhcCCchhhHHhhhcc-HHHHHHHHHHHHhCCCEE---EEEEecCCCCCCHHHHHHHHHHHHH-hCCCEEEEEE
Confidence 3455566666 89999998663 22223332110 123233 2333432 23456888888888764 45443 455
Q ss_pred cCC
Q 024250 235 NPD 237 (270)
Q Consensus 235 sp~ 237 (270)
+|.
T Consensus 178 ~~~ 180 (258)
T 4h3d_A 178 MPQ 180 (258)
T ss_dssp CCS
T ss_pred ccC
Confidence 543
No 87
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=54.45 E-value=94 Score=27.35 Aligned_cols=28 Identities=18% Similarity=0.303 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHHHHHcCCCEEEeccC
Q 024250 85 CYQIALAIKDEVEDLEKAGINVIQIDEA 112 (270)
Q Consensus 85 ~~~l~~~~~~~~~~l~~~G~~~IQiDEP 112 (270)
++++.+.+.+..+...++|.+.|+|.--
T Consensus 156 I~~ii~~f~~AA~~A~~aGfDgVEih~a 183 (361)
T 3gka_A 156 IPGVVAAFRRGAENARAAGFDGVEVHGA 183 (361)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEECCc
Confidence 4667777777777888999999999863
No 88
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=53.83 E-value=72 Score=27.22 Aligned_cols=80 Identities=14% Similarity=0.125 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHH---HHHH
Q 024250 90 LAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDII---HSII 166 (270)
Q Consensus 90 ~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~---~~l~ 166 (270)
+.++++++.+.+.|++-|.+-=- -+....+ +.++..+ +.+...+... +.++++.++...+..+.+ ....
T Consensus 37 ~~l~~lv~~li~~Gv~gl~v~Gt-tGE~~~L---s~~Er~~-v~~~~~~~~~---grvpviaGvg~~st~~ai~la~~A~ 108 (304)
T 3cpr_A 37 AAGREVAAYLVDKGLDSLVLAGT-TGESPTT---TAAEKLE-LLKAVREEVG---DRAKLIAGVGTNNTRTSVELAEAAA 108 (304)
T ss_dssp HHHHHHHHHHHHTTCCEEEESST-TTTTTTS---CHHHHHH-HHHHHHHHHT---TTSEEEEECCCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECcc-ccChhhC---CHHHHHH-HHHHHHHHhC---CCCcEEecCCCCCHHHHHHHHHHHH
Confidence 46677788888999997655310 0011111 1122222 2222222222 246778887744555443 3456
Q ss_pred hCCCCEEEEEc
Q 024250 167 DMDADVITIEN 177 (270)
Q Consensus 167 ~~~vd~l~ld~ 177 (270)
++++|++.+=.
T Consensus 109 ~~Gadavlv~~ 119 (304)
T 3cpr_A 109 SAGADGLLVVT 119 (304)
T ss_dssp HTTCSEEEEEC
T ss_pred hcCCCEEEECC
Confidence 78999987753
No 89
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=53.26 E-value=65 Score=27.29 Aligned_cols=80 Identities=9% Similarity=-0.028 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHH---HHHH
Q 024250 90 LAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDII---HSII 166 (270)
Q Consensus 90 ~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~---~~l~ 166 (270)
+.++++++.+.+.|++-|.+--- -.....+ +.++..+ +.+...+... +.++++.++...+..+.+ ....
T Consensus 22 ~~l~~lv~~li~~Gv~gl~~~Gt-tGE~~~L---s~~Er~~-v~~~~~~~~~---gr~pvi~Gvg~~~t~~ai~la~~a~ 93 (291)
T 3a5f_A 22 DKLSELIEWHIKSKTDAIIVCGT-TGEATTM---TETERKE-TIKFVIDKVN---KRIPVIAGTGSNNTAASIAMSKWAE 93 (291)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSG-GGTGGGS---CHHHHHH-HHHHHHHHHT---TSSCEEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECcc-ccChhhC---CHHHHHH-HHHHHHHHhC---CCCcEEEeCCcccHHHHHHHHHHHH
Confidence 46777888888999997655311 0000111 1122222 2222222222 235678887744555444 4457
Q ss_pred hCCCCEEEEEc
Q 024250 167 DMDADVITIEN 177 (270)
Q Consensus 167 ~~~vd~l~ld~ 177 (270)
++++|++.+=.
T Consensus 94 ~~Gadavlv~~ 104 (291)
T 3a5f_A 94 SIGVDGLLVIT 104 (291)
T ss_dssp HTTCSEEEEEC
T ss_pred hcCCCEEEEcC
Confidence 79999988753
No 90
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=53.13 E-value=26 Score=28.11 Aligned_cols=62 Identities=11% Similarity=0.192 Sum_probs=35.8
Q ss_pred HHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHHHHHhCCCCEE
Q 024250 94 DEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVI 173 (270)
Q Consensus 94 ~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~~l~~~~vd~l 173 (270)
+.++++.+.|+++||+-++.++ ..++ .+.++++.+.. +..++++ .++ +...++++|++
T Consensus 17 ~~~~~a~~~Gv~~v~lr~k~~~---------~~~~----~~~i~~l~~~~--~~~livn---d~~----~~A~~~gadgv 74 (210)
T 3ceu_A 17 KIITALFEEGLDILHLRKPETP---------AMYS----ERLLTLIPEKY--HRRIVTH---EHF----YLKEEFNLMGI 74 (210)
T ss_dssp HHHHHHHHTTCCEEEECCSSCC---------HHHH----HHHHHHSCGGG--GGGEEES---SCT----THHHHTTCSEE
T ss_pred HHHHHHHHCCCCEEEEccCCCC---------HHHH----HHHHHHHHHHh--CCeEEEe---CCH----HHHHHcCCCEE
Confidence 4456677889999999987643 1122 22334433322 2344554 222 56677788888
Q ss_pred EEEc
Q 024250 174 TIEN 177 (270)
Q Consensus 174 ~ld~ 177 (270)
++..
T Consensus 75 hl~~ 78 (210)
T 3ceu_A 75 HLNA 78 (210)
T ss_dssp ECCS
T ss_pred EECc
Confidence 8753
No 91
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=53.12 E-value=63 Score=27.63 Aligned_cols=79 Identities=8% Similarity=0.012 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHH---HHHH
Q 024250 90 LAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDII---HSII 166 (270)
Q Consensus 90 ~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~---~~l~ 166 (270)
+.++++++.+.+.|++-|.+-=-. .....+ + .++-.+.++.+.+...+.++++.|+...+..+.+ ....
T Consensus 35 ~~l~~lv~~li~~Gv~Gl~v~GtT-GE~~~L---s----~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~ 106 (307)
T 3s5o_A 35 GKLEENLHKLGTFPFRGFVVQGSN-GEFPFL---T----SSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMA 106 (307)
T ss_dssp HHHHHHHHHHTTSCCSEEEESSGG-GTGGGS---C----HHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECccc-cchhhC---C----HHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHH
Confidence 367777888889999976543100 000001 1 1222334444555555557788888744555433 4557
Q ss_pred hCCCCEEEEE
Q 024250 167 DMDADVITIE 176 (270)
Q Consensus 167 ~~~vd~l~ld 176 (270)
++++|++.+=
T Consensus 107 ~~Gadavlv~ 116 (307)
T 3s5o_A 107 QVGADAAMVV 116 (307)
T ss_dssp HTTCSEEEEE
T ss_pred HcCCCEEEEc
Confidence 7999999884
No 92
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=52.35 E-value=60 Score=27.61 Aligned_cols=80 Identities=13% Similarity=0.011 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHH---HHHH
Q 024250 90 LAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDII---HSII 166 (270)
Q Consensus 90 ~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~---~~l~ 166 (270)
+.++++++.+.+.|++-|.+-=- -.....+ +.++..+ +.+...+. ..+.++++.|+...+..+.+ ....
T Consensus 28 ~~l~~lv~~li~~Gv~gl~~~Gt-tGE~~~L---s~~Er~~-v~~~~~~~---~~grvpviaGvg~~~t~~ai~la~~a~ 99 (297)
T 3flu_A 28 EQLRDLIDWHIENGTDGIVAVGT-TGESATL---SVEEHTA-VIEAVVKH---VAKRVPVIAGTGANNTVEAIALSQAAE 99 (297)
T ss_dssp HHHHHHHHHHHHTTCCEEEESST-TTTGGGS---CHHHHHH-HHHHHHHH---HTTSSCEEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEeCcc-ccCcccC---CHHHHHH-HHHHHHHH---hCCCCcEEEeCCCcCHHHHHHHHHHHH
Confidence 46677788888999997655321 0111111 1222222 22222222 22246678887744555433 4557
Q ss_pred hCCCCEEEEEc
Q 024250 167 DMDADVITIEN 177 (270)
Q Consensus 167 ~~~vd~l~ld~ 177 (270)
++++|++.+=.
T Consensus 100 ~~Gadavlv~~ 110 (297)
T 3flu_A 100 KAGADYTLSVV 110 (297)
T ss_dssp HTTCSEEEEEC
T ss_pred HcCCCEEEECC
Confidence 79999988753
No 93
>4dnh_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati YORK structural genomics research consortium; 2.50A {Sinorhizobium meliloti}
Probab=52.34 E-value=22 Score=31.17 Aligned_cols=60 Identities=18% Similarity=0.244 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeec
Q 024250 85 CYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMC 154 (270)
Q Consensus 85 ~~~l~~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c 154 (270)
+.++..+|.+.++...++|.++|-+.-=.|+..- ..+++|.. .|.+++++.+. +++||--
T Consensus 132 l~~V~~AY~EQ~~~Ve~~G~~~ILMASRaLA~~A----~~pdDY~~----VY~~vL~q~~~--PVILHWL 191 (396)
T 4dnh_A 132 IDDILAAYESQIEAIEAEGGRIILMASRALAAAA----KGPEDYIR----VYDRVLSQVKE--PVIIHWL 191 (396)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEECCCHHHHHHC----CSHHHHHH----HHHHHHHHCSS--CEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCeEEEehhHHHHHHh----CCHHHHHH----HHHHHHHhcCC--CEEEEec
Confidence 6788899999999999999999988876666422 14555654 55565555553 4688853
No 94
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=52.03 E-value=89 Score=24.94 Aligned_cols=81 Identities=11% Similarity=0.137 Sum_probs=44.9
Q ss_pred HHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHHHHHhCCCCEEE
Q 024250 95 EVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVIT 174 (270)
Q Consensus 95 ~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~~l~~~~vd~l~ 174 (270)
.++++.+.|+++||+.+-.. + ..+.++.+.+ + ...+...+.. ..+.++...+.++|.++
T Consensus 30 ~~~~l~~gGv~~iel~~k~~---------~-------~~~~i~~~~~--~-~~~~gag~vl--~~d~~~~A~~~GAd~v~ 88 (207)
T 2yw3_A 30 LARVLEEEGVGALEITLRTE---------K-------GLEALKALRK--S-GLLLGAGTVR--SPKEAEAALEAGAAFLV 88 (207)
T ss_dssp HHHHHHHTTCCEEEEECSST---------H-------HHHHHHHHTT--S-SCEEEEESCC--SHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHcCCCEEEEeCCCh---------H-------HHHHHHHHhC--C-CCEEEeCeEe--eHHHHHHHHHcCCCEEE
Confidence 45566788999999985321 1 1234444433 2 2334444432 23567788889999998
Q ss_pred EEccCCCchhHHHhhhcccCCCeeece
Q 024250 175 IENSRSDEKLLSVFREGVKYGAGIGPG 201 (270)
Q Consensus 175 ld~~~~~~~~l~~l~~~~~~~~~l~~G 201 (270)
... .+.+..+..+.. +..+.+|
T Consensus 89 ~~~--~d~~v~~~~~~~---g~~~i~G 110 (207)
T 2yw3_A 89 SPG--LLEEVAALAQAR---GVPYLPG 110 (207)
T ss_dssp ESS--CCHHHHHHHHHH---TCCEEEE
T ss_pred cCC--CCHHHHHHHHHh---CCCEEec
Confidence 663 234333444432 3345556
No 95
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=51.84 E-value=73 Score=25.83 Aligned_cols=70 Identities=9% Similarity=0.076 Sum_probs=40.2
Q ss_pred HHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHHHHHhCCCCEEEE
Q 024250 96 VEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITI 175 (270)
Q Consensus 96 ~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~~l~~~~vd~l~l 175 (270)
++.+.++|+++|++-++.... . .. ....+.++++.+..+ +++++.-...+ .+-+..++++++|++++
T Consensus 37 a~~~~~~Gad~i~v~d~~~~~----~--~~----~~~~~~i~~i~~~~~--iPvi~~Ggi~~-~~~~~~~~~~Gad~V~l 103 (252)
T 1ka9_F 37 ARAYDEAGADELVFLDISATH----E--ER----AILLDVVARVAERVF--IPLTVGGGVRS-LEDARKLLLSGADKVSV 103 (252)
T ss_dssp HHHHHHHTCSCEEEEECCSST----T--CH----HHHHHHHHHHHTTCC--SCEEEESSCCS-HHHHHHHHHHTCSEEEE
T ss_pred HHHHHHcCCCEEEEEcCCccc----c--Cc----cccHHHHHHHHHhCC--CCEEEECCcCC-HHHHHHHHHcCCCEEEE
Confidence 445567899999988765321 0 11 112344555555443 44544322222 24566778889999999
Q ss_pred Ecc
Q 024250 176 ENS 178 (270)
Q Consensus 176 d~~ 178 (270)
-..
T Consensus 104 g~~ 106 (252)
T 1ka9_F 104 NSA 106 (252)
T ss_dssp CHH
T ss_pred ChH
Confidence 863
No 96
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=51.73 E-value=1.3e+02 Score=26.53 Aligned_cols=28 Identities=25% Similarity=0.347 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHHHHcCCCEEEeccC
Q 024250 85 CYQIALAIKDEVEDLEKAGINVIQIDEA 112 (270)
Q Consensus 85 ~~~l~~~~~~~~~~l~~~G~~~IQiDEP 112 (270)
++++.+.+.+..+...++|++.|+|.--
T Consensus 148 I~~ii~~f~~AA~~a~~aGfDgVEih~a 175 (362)
T 4ab4_A 148 INDIVEAYRSGAENAKAAGFDGVEIHGA 175 (362)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEECCc
Confidence 5677777888888888999999999853
No 97
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=51.25 E-value=64 Score=27.49 Aligned_cols=80 Identities=11% Similarity=0.025 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCC-CceEEEeeccCCchhHH---HHH
Q 024250 90 LAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQD-TTQIHTHMCYSNFNDII---HSI 165 (270)
Q Consensus 90 ~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~lH~c~g~~~~~~---~~l 165 (270)
+.++++++.+.+.|++-|.+--- -+....+ +.++. ..+.+...+. ..+ +++++.|+...+..+.+ ...
T Consensus 28 ~~l~~lv~~li~~Gv~gl~v~Gt-tGE~~~L---s~~Er-~~v~~~~~~~---~~g~rvpviaGvg~~~t~~ai~la~~a 99 (301)
T 3m5v_A 28 QSYARLIKRQIENGIDAVVPVGT-TGESATL---THEEH-RTCIEIAVET---CKGTKVKVLAGAGSNATHEAVGLAKFA 99 (301)
T ss_dssp HHHHHHHHHHHHTTCCEEECSST-TTTGGGS---CHHHH-HHHHHHHHHH---HTTSSCEEEEECCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECcc-ccChhhC---CHHHH-HHHHHHHHHH---hCCCCCeEEEeCCCCCHHHHHHHHHHH
Confidence 46677788888999997655310 0000101 12222 2222222222 233 36788887744555444 455
Q ss_pred HhCCCCEEEEEc
Q 024250 166 IDMDADVITIEN 177 (270)
Q Consensus 166 ~~~~vd~l~ld~ 177 (270)
.++++|++.+=.
T Consensus 100 ~~~Gadavlv~~ 111 (301)
T 3m5v_A 100 KEHGADGILSVA 111 (301)
T ss_dssp HHTTCSEEEEEC
T ss_pred HHcCCCEEEEcC
Confidence 679999988753
No 98
>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea}
Probab=50.82 E-value=72 Score=28.41 Aligned_cols=74 Identities=12% Similarity=0.121 Sum_probs=43.9
Q ss_pred HHHcCCCEEEeccCcccc----CCCCCCccHHHH---HHHHHHHHHHHhcCCCCCceEEEeeccCC-----------c-h
Q 024250 99 LEKAGINVIQIDEAALRE----GLPLRKSEHAFY---LDWAVHSFRITNCGVQDTTQIHTHMCYSN-----------F-N 159 (270)
Q Consensus 99 l~~~G~~~IQiDEP~l~~----~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~lH~c~g~-----------~-~ 159 (270)
|.++|.++|.||+-.... .-+..+ +++.| ++...+.++. . +++++||+..|. + .
T Consensus 40 l~~~G~~~~~iDdgW~~~~r~~~G~~~~-~~~kFP~Gl~~l~~~i~~--~----Glk~Giw~~pg~~tc~~~pg~~~~~~ 112 (397)
T 3a5v_A 40 LKDLGYNYVIIDDCWQKNERESSKTLLA-DPTKFPRGIKPLVDDIHN--L----GLKAGIYSSAGTLTCGGHIASLGYED 112 (397)
T ss_dssp HHHHTCCEEECCSSCBCSSCCTTSCCCB-CTTTCTTCHHHHHHHHHH--T----TCEEEEEEESSSBCTTSCBCCTTCHH
T ss_pred CcccCceEEEECCCcCCCCCCCCCCeEE-ChhcCCcCHHHHHHHHHH--c----CCEEEEEecCCCCccCCCHHHHHHHH
Confidence 556899999999976641 100000 11111 2223333333 1 366788776553 2 2
Q ss_pred hHHHHHHhCCCCEEEEEccC
Q 024250 160 DIIHSIIDMDADVITIENSR 179 (270)
Q Consensus 160 ~~~~~l~~~~vd~l~ld~~~ 179 (270)
.....+.+.+||.|-+|+..
T Consensus 113 ~~~~~~~~wGvdyvK~D~~~ 132 (397)
T 3a5v_A 113 IDAKTWAKWGIDYLKYDNCY 132 (397)
T ss_dssp HHHHHHHHHTCCEEEEECTT
T ss_pred HHHHHHHHcCCCEEEECCCc
Confidence 45678899999999999965
No 99
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=50.03 E-value=60 Score=27.78 Aligned_cols=80 Identities=10% Similarity=0.044 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHH---HHHH
Q 024250 90 LAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDII---HSII 166 (270)
Q Consensus 90 ~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~---~~l~ 166 (270)
+.++++++.+.+.|++-|.+--- -+....+ +.++..+ .++.+.+...++++++.|+...+..+.+ ....
T Consensus 36 ~~l~~lv~~li~~Gv~gi~v~Gt-tGE~~~L---t~~Er~~----v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~ 107 (304)
T 3l21_A 36 ATAARLANHLVDQGCDGLVVSGT-TGESPTT---TDGEKIE----LLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACA 107 (304)
T ss_dssp HHHHHHHHHHHHTTCSEEEESST-TTTGGGS---CHHHHHH----HHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEeCcc-ccchhhC---CHHHHHH----HHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHH
Confidence 46777788888999997654310 0000111 1222222 2222222222346788887644555433 4556
Q ss_pred hCCCCEEEEEc
Q 024250 167 DMDADVITIEN 177 (270)
Q Consensus 167 ~~~vd~l~ld~ 177 (270)
++++|++.+=.
T Consensus 108 ~~Gadavlv~~ 118 (304)
T 3l21_A 108 AEGAHGLLVVT 118 (304)
T ss_dssp HHTCSEEEEEC
T ss_pred HcCCCEEEECC
Confidence 78999988753
No 100
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=49.76 E-value=52 Score=27.92 Aligned_cols=80 Identities=15% Similarity=0.039 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHH---HHHH
Q 024250 90 LAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDII---HSII 166 (270)
Q Consensus 90 ~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~---~~l~ 166 (270)
+.++++++.+.+.|++-|.+--- -.....+ +.++..+ .++.+.+...+.++++.|+...+..+.+ ....
T Consensus 22 ~~l~~lv~~li~~Gv~gl~~~Gt-tGE~~~L---s~~Er~~----v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~ 93 (291)
T 3tak_A 22 KSLEKLVEWHIEQGTNSIVAVGT-TGEASTL---SMEEHTQ----VIKEIIRVANKRIPIIAGTGANSTREAIELTKAAK 93 (291)
T ss_dssp HHHHHHHHHHHHHTCCEEEESST-TTTGGGS---CHHHHHH----HHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEECcc-ccccccC---CHHHHHH----HHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHH
Confidence 46677778888899997654310 1111111 1222222 2222222222346678887744555444 3556
Q ss_pred hCCCCEEEEEc
Q 024250 167 DMDADVITIEN 177 (270)
Q Consensus 167 ~~~vd~l~ld~ 177 (270)
++++|++.+=.
T Consensus 94 ~~Gadavlv~~ 104 (291)
T 3tak_A 94 DLGADAALLVT 104 (291)
T ss_dssp HHTCSEEEEEC
T ss_pred hcCCCEEEEcC
Confidence 78999988753
No 101
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=49.69 E-value=75 Score=26.93 Aligned_cols=80 Identities=10% Similarity=-0.001 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHH---HHHH
Q 024250 90 LAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDII---HSII 166 (270)
Q Consensus 90 ~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~---~~l~ 166 (270)
+.++++++.+.+.|++-|.+--- -.....+ +.++..+ +.+...+... +.++++.++...+..+.+ ....
T Consensus 21 ~~l~~lv~~li~~Gv~gl~~~Gt-tGE~~~L---s~~Er~~-v~~~~~~~~~---grvpviaGvg~~~t~~ai~la~~A~ 92 (294)
T 2ehh_A 21 EALGNLIEFHVDNGTDAILVCGT-TGESPTL---TFEEHEK-VIEFAVKRAA---GRIKVIAGTGGNATHEAVHLTAHAK 92 (294)
T ss_dssp HHHHHHHHHHHTTTCCEEEESST-TTTGGGS---CHHHHHH-HHHHHHHHHT---TSSEEEEECCCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEECcc-ccChhhC---CHHHHHH-HHHHHHHHhC---CCCcEEEecCCCCHHHHHHHHHHHH
Confidence 46777788888999997655310 0000101 1122222 2222222222 246778887744555444 3456
Q ss_pred hCCCCEEEEEc
Q 024250 167 DMDADVITIEN 177 (270)
Q Consensus 167 ~~~vd~l~ld~ 177 (270)
++++|++.+=.
T Consensus 93 ~~Gadavlv~~ 103 (294)
T 2ehh_A 93 EVGADGALVVV 103 (294)
T ss_dssp HTTCSEEEEEC
T ss_pred hcCCCEEEECC
Confidence 78999988753
No 102
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=49.50 E-value=65 Score=27.28 Aligned_cols=80 Identities=13% Similarity=-0.036 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHHH---HH
Q 024250 90 LAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHS---II 166 (270)
Q Consensus 90 ~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~~---l~ 166 (270)
+.++++++.+.+.|++-|.+--- -.....+ +.++..+ +.+...+... +.++++.++...+..+.++. ..
T Consensus 22 ~~l~~lv~~li~~Gv~gl~~~Gt-tGE~~~L---s~~Er~~-v~~~~~~~~~---gr~pviaGvg~~~t~~ai~la~~a~ 93 (292)
T 2ojp_A 22 ASLKKLIDYHVASGTSAIVSVGT-TGESATL---NHDEHAD-VVMMTLDLAD---GRIPVIAGTGANATAEAISLTQRFN 93 (292)
T ss_dssp HHHHHHHHHHHHHTCCEEEESST-TTTGGGS---CHHHHHH-HHHHHHHHHT---TSSCEEEECCCSSHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCCEEEECcc-ccchhhC---CHHHHHH-HHHHHHHHhC---CCCcEEEecCCccHHHHHHHHHHHH
Confidence 46677788888899997655310 0000101 1122222 2222222222 23567888774455554443 45
Q ss_pred hCCCCEEEEEc
Q 024250 167 DMDADVITIEN 177 (270)
Q Consensus 167 ~~~vd~l~ld~ 177 (270)
++++|++.+=.
T Consensus 94 ~~Gadavlv~~ 104 (292)
T 2ojp_A 94 DSGIVGCLTVT 104 (292)
T ss_dssp TSSCSEEEEEC
T ss_pred hcCCCEEEECC
Confidence 68899987753
No 103
>3pnz_A Phosphotriesterase family protein; amidohydrolase fold; HET: KCX; 1.60A {Listeria monocytogenes serotype 4b strorganism_taxid} SCOP: c.1.9.0
Probab=49.41 E-value=1.3e+02 Score=26.00 Aligned_cols=90 Identities=13% Similarity=0.026 Sum_probs=51.9
Q ss_pred ceEEEeeccC-CchhHHHHHHhCCCC--EEEEEcc--CCCchhHHHhhhcccCCCeeeceEecCCCCCCCCHHHHHHHHH
Q 024250 147 TQIHTHMCYS-NFNDIIHSIIDMDAD--VITIENS--RSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRIN 221 (270)
Q Consensus 147 ~~i~lH~c~g-~~~~~~~~l~~~~vd--~l~ld~~--~~~~~~l~~l~~~~~~~~~l~~GvVd~~~~~~e~~e~v~~~i~ 221 (270)
.++++|+-.| +..+.++.|.+.+++ .+.+... +.+.+....+.+ .|-.++++-+-+.+ ..+-++-.+.++
T Consensus 182 lPViiH~r~g~~a~~~l~iL~e~~~~~~~vvi~H~~~s~~~e~a~~~l~---~G~~i~~~g~~t~~--~~~~~~~~~~l~ 256 (330)
T 3pnz_A 182 APIHSHTEAGTMALEQIEILKQENIPLEYLSIGHMDRNLDPYYHKQVAK---TGAFMSFDGIAKIK--YAPESARIAAIL 256 (330)
T ss_dssp CCEEEECGGGCCHHHHHHHHHHTTCCGGGEEETTGGGSCCHHHHHHHHT---TTCEEEECCTTCTT--TCCHHHHHHHHH
T ss_pred CeEEEeCCCCcChHHHHHHHHHcCCCCCeEEEecCCCCCCHHHHHHHHH---cCcEEEEccCcccC--CCChHHHHHHHH
Confidence 5689996533 233457777777765 4545443 134443344443 35556555332111 112244556777
Q ss_pred HHhccccCCceEecCCCCCC
Q 024250 222 KMLAVLETNILWVNPDCGLK 241 (270)
Q Consensus 222 ~~~~~~~~~~l~vsp~Cgl~ 241 (270)
++++..+.+|+++++||...
T Consensus 257 ~lv~~g~~drilleTD~p~~ 276 (330)
T 3pnz_A 257 YLVSEGFEDQILVSGDTARK 276 (330)
T ss_dssp HHHHTTCGGGEEECCCCCSG
T ss_pred HHHHcCCCCeEEEeCCCCCC
Confidence 77777778999999999863
No 104
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=49.40 E-value=79 Score=26.91 Aligned_cols=80 Identities=11% Similarity=0.050 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHH---HHHH
Q 024250 90 LAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDII---HSII 166 (270)
Q Consensus 90 ~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~---~~l~ 166 (270)
+.++++++.+.+.|++-|.+--- -.....+ +.++..+ +.+...+... +.++++.++...+..+.+ ....
T Consensus 33 ~~l~~lv~~li~~Gv~gl~v~Gt-TGE~~~L---s~eEr~~-v~~~~~~~~~---grvpViaGvg~~~t~~ai~la~~A~ 104 (301)
T 1xky_A 33 AKTTKLVNYLIDNGTTAIVVGGT-TGESPTL---TSEEKVA-LYRHVVSVVD---KRVPVIAGTGSNNTHASIDLTKKAT 104 (301)
T ss_dssp HHHHHHHHHHHHTTCCEEEESST-TTTGGGS---CHHHHHH-HHHHHHHHHT---TSSCEEEECCCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECcc-ccChhhC---CHHHHHH-HHHHHHHHhC---CCceEEeCCCCCCHHHHHHHHHHHH
Confidence 46677788888999997655310 0000111 1222222 2222222222 235677887744555444 3457
Q ss_pred hCCCCEEEEEc
Q 024250 167 DMDADVITIEN 177 (270)
Q Consensus 167 ~~~vd~l~ld~ 177 (270)
++++|++.+=.
T Consensus 105 ~~Gadavlv~~ 115 (301)
T 1xky_A 105 EVGVDAVMLVA 115 (301)
T ss_dssp HTTCSEEEEEC
T ss_pred hcCCCEEEEcC
Confidence 79999988753
No 105
>3ovg_A Amidohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, NYSGXRC, HAD, PSI; HET: KCX; 2.06A {Mycoplasma synoviae} PDB: 3msr_A*
Probab=49.37 E-value=83 Score=27.71 Aligned_cols=90 Identities=16% Similarity=0.107 Sum_probs=50.9
Q ss_pred ceEEEeeccC-CchhHHHHHHhCCCC--EEEEEccC--CCchhHHHhh-hcccCCCeeeceEecCCCCCCCCHHHHHHHH
Q 024250 147 TQIHTHMCYS-NFNDIIHSIIDMDAD--VITIENSR--SDEKLLSVFR-EGVKYGAGIGPGVYDIHSPRIPSTEEIADRI 220 (270)
Q Consensus 147 ~~i~lH~c~g-~~~~~~~~l~~~~vd--~l~ld~~~--~~~~~l~~l~-~~~~~~~~l~~GvVd~~~~~~e~~e~v~~~i 220 (270)
.+|++|+-.| +-.+.++.|.+.+++ .+.+-+.. .+.+..+.+. + .|-.|+++-+-. ..+. +-+.-.+.+
T Consensus 183 lPViiH~r~gr~a~d~l~iL~e~g~~~~~vvi~H~~~~~~~~~a~~~l~~---~G~yI~f~g~~~-~~~~-~~~~ra~~l 257 (363)
T 3ovg_A 183 CPILVHTQLGTMALEVAKHLIGFGANPDKIQISHLNKNPDKYYYEKVIKE---TGVTLCFDGPDR-VKYY-PDSLLAENI 257 (363)
T ss_dssp CCEEEEEETTCSHHHHHHHHHHHTCCGGGEEEECGGGSCCHHHHHHHHHH---HCCEEEECCTTC-TTTC-CHHHHHHHH
T ss_pred CEEEEeCCCCCCHHHHHHHHHhcCCCCCcEEEEcCCCCCCHHHHHHHHHH---CCcEEEECCeec-cccC-ChhHHHHHH
Confidence 5689997543 223677777776654 45554433 2332222232 3 244555552211 1111 223456678
Q ss_pred HHHhccccCCceEecCCCCCC
Q 024250 221 NKMLAVLETNILWVNPDCGLK 241 (270)
Q Consensus 221 ~~~~~~~~~~~l~vsp~Cgl~ 241 (270)
+++++..+.+++++++||...
T Consensus 258 ~~lv~~~p~drILleTDap~~ 278 (363)
T 3ovg_A 258 KYLVDKGLQKHITLSLDAGRI 278 (363)
T ss_dssp HHHHHTTCGGGEEECCCCCSG
T ss_pred HHHHHhcCCCeEEEeCCCCCC
Confidence 888888888999999999843
No 106
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=49.33 E-value=1e+02 Score=26.18 Aligned_cols=72 Identities=10% Similarity=0.029 Sum_probs=33.2
Q ss_pred HHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEee--ccCCchhHHHHHHhCCCC
Q 024250 94 DEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHM--CYSNFNDIIHSIIDMDAD 171 (270)
Q Consensus 94 ~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~--c~g~~~~~~~~l~~~~vd 171 (270)
+.++.+.++|++.|.|-+-.=. . .|. .+.+.++.+.+.++ +.++.+|+ -+|--....-...+.+++
T Consensus 163 ~~~~~~~~~G~d~i~l~DT~G~----~---~P~----~~~~lv~~l~~~~~-~~~l~~H~Hn~~Gla~An~laAv~aGa~ 230 (302)
T 2ftp_A 163 WVARELQQMGCYEVSLGDTIGV----G---TAG----ATRRLIEAVASEVP-RERLAGHFHDTYGQALANIYASLLEGIA 230 (302)
T ss_dssp HHHHHHHHTTCSEEEEEESSSC----C---CHH----HHHHHHHHHTTTSC-GGGEEEEEBCTTSCHHHHHHHHHHTTCC
T ss_pred HHHHHHHHcCCCEEEEeCCCCC----c---CHH----HHHHHHHHHHHhCC-CCeEEEEeCCCccHHHHHHHHHHHhCCC
Confidence 3344455566666555542211 0 222 23334444444443 24556665 344333333344566776
Q ss_pred EEEEEc
Q 024250 172 VITIEN 177 (270)
Q Consensus 172 ~l~ld~ 177 (270)
.+..=.
T Consensus 231 ~vd~tv 236 (302)
T 2ftp_A 231 VFDSSV 236 (302)
T ss_dssp EEEEBG
T ss_pred EEEecc
Confidence 665544
No 107
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=48.61 E-value=57 Score=27.98 Aligned_cols=79 Identities=10% Similarity=-0.003 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHH---HHHH
Q 024250 90 LAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDII---HSII 166 (270)
Q Consensus 90 ~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~---~~l~ 166 (270)
+.++++++.+.+.|++-|.+-= +-.....+ +.++..+ +.+...+. ..++++++.|+...+..+.+ ....
T Consensus 29 ~~l~~lv~~li~~Gv~gl~v~G-tTGE~~~L---s~~Er~~-v~~~~~~~---~~grvpviaGvg~~~t~~ai~la~~A~ 100 (309)
T 3fkr_A 29 ASQKRAVDFMIDAGSDGLCILA-NFSEQFAI---TDDERDV-LTRTILEH---VAGRVPVIVTTSHYSTQVCAARSLRAQ 100 (309)
T ss_dssp HHHHHHHHHHHHTTCSCEEESS-GGGTGGGS---CHHHHHH-HHHHHHHH---HTTSSCEEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECc-cccCcccC---CHHHHHH-HHHHHHHH---hCCCCcEEEecCCchHHHHHHHHHHHH
Confidence 4667778888899998665531 00111111 1222222 22222222 22346678887744555433 4557
Q ss_pred hCCCCEEEEE
Q 024250 167 DMDADVITIE 176 (270)
Q Consensus 167 ~~~vd~l~ld 176 (270)
++++|++.+=
T Consensus 101 ~~Gadavlv~ 110 (309)
T 3fkr_A 101 QLGAAMVMAM 110 (309)
T ss_dssp HTTCSEEEEC
T ss_pred HcCCCEEEEc
Confidence 7999998874
No 108
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=48.55 E-value=74 Score=27.14 Aligned_cols=80 Identities=9% Similarity=0.046 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHH---HHHH
Q 024250 90 LAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDII---HSII 166 (270)
Q Consensus 90 ~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~---~~l~ 166 (270)
+.++++++.+.+.|++-|.+--- -.....+ +.++..+ +.+...+. ..++++++.++...+..+.+ ....
T Consensus 32 ~~l~~lv~~li~~Gv~Gl~v~Gt-TGE~~~L---s~eEr~~-v~~~~~~~---~~grvpViaGvg~~~t~~ai~la~~A~ 103 (303)
T 2wkj_A 32 ASLRRLVQFNIQQGIDGLYVGGS-TGEAFVQ---SLSEREQ-VLEIVAEE---AKGKIKLIAHVGCVSTAESQQLAASAK 103 (303)
T ss_dssp HHHHHHHHHHHHTTCSEEEESST-TTTGGGS---CHHHHHH-HHHHHHHH---HTTTSEEEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECee-ccChhhC---CHHHHHH-HHHHHHHH---hCCCCcEEEecCCCCHHHHHHHHHHHH
Confidence 46677788888999997655310 0000111 1122222 22222222 22346788887744555444 3456
Q ss_pred hCCCCEEEEEc
Q 024250 167 DMDADVITIEN 177 (270)
Q Consensus 167 ~~~vd~l~ld~ 177 (270)
++++|++.+=.
T Consensus 104 ~~Gadavlv~~ 114 (303)
T 2wkj_A 104 RYGFDAVSAVT 114 (303)
T ss_dssp HHTCSEEEEEC
T ss_pred hCCCCEEEecC
Confidence 78999987753
No 109
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=47.87 E-value=56 Score=28.13 Aligned_cols=79 Identities=15% Similarity=0.119 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHH---HHHH
Q 024250 90 LAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDII---HSII 166 (270)
Q Consensus 90 ~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~---~~l~ 166 (270)
+.++++++.+.+.|++-|.+--- -.....+ +.++..+ +.+...+. ..+.++++.++...+..+.+ ....
T Consensus 45 ~~l~~lv~~li~~Gv~Gi~v~Gt-TGE~~~L---s~~Er~~-v~~~~v~~---~~grvpViaGvg~~~t~~ai~la~~A~ 116 (315)
T 3na8_A 45 PALGRSIERLIDGGVHAIAPLGS-TGEGAYL---SDPEWDE-VVDFTLKT---VAHRVPTIVSVSDLTTAKTVRRAQFAE 116 (315)
T ss_dssp HHHHHHHHHHHHTTCSEEECSSG-GGTGGGS---CHHHHHH-HHHHHHHH---HTTSSCBEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECcc-ccChhhC---CHHHHHH-HHHHHHHH---hCCCCcEEEecCCCCHHHHHHHHHHHH
Confidence 46677788888999997654320 0010111 1222222 22222222 22235677887744555444 3557
Q ss_pred hCCCCEEEEE
Q 024250 167 DMDADVITIE 176 (270)
Q Consensus 167 ~~~vd~l~ld 176 (270)
++++|++.+=
T Consensus 117 ~~Gadavlv~ 126 (315)
T 3na8_A 117 SLGAEAVMVL 126 (315)
T ss_dssp HTTCSEEEEC
T ss_pred hcCCCEEEEC
Confidence 7899998875
No 110
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=47.68 E-value=69 Score=27.07 Aligned_cols=80 Identities=14% Similarity=0.055 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHH---HHHH
Q 024250 90 LAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDII---HSII 166 (270)
Q Consensus 90 ~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~---~~l~ 166 (270)
+.++++++.+.+.|++-|.+--- -.....+ +.++..+ +.+...+... +.++++.++...+..+.+ ....
T Consensus 21 ~~l~~lv~~li~~Gv~gl~~~Gt-tGE~~~L---s~~Er~~-v~~~~~~~~~---gr~pviaGvg~~~t~~ai~la~~a~ 92 (289)
T 2yxg_A 21 DGLEENINFLIENGVSGIVAVGT-TGESPTL---SHEEHKK-VIEKVVDVVN---GRVQVIAGAGSNCTEEAIELSVFAE 92 (289)
T ss_dssp HHHHHHHHHHHHTTCSEEEESST-TTTGGGS---CHHHHHH-HHHHHHHHHT---TSSEEEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEECcc-ccChhhC---CHHHHHH-HHHHHHHHhC---CCCcEEEeCCCCCHHHHHHHHHHHH
Confidence 46777788888999997655310 0000111 1122222 2222222222 246788887744555444 3456
Q ss_pred hCCCCEEEEEc
Q 024250 167 DMDADVITIEN 177 (270)
Q Consensus 167 ~~~vd~l~ld~ 177 (270)
++++|++.+=.
T Consensus 93 ~~Gadavlv~~ 103 (289)
T 2yxg_A 93 DVGADAVLSIT 103 (289)
T ss_dssp HHTCSEEEEEC
T ss_pred hcCCCEEEECC
Confidence 78999988753
No 111
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=47.18 E-value=94 Score=27.41 Aligned_cols=79 Identities=10% Similarity=-0.026 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHH---HHHH
Q 024250 90 LAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDII---HSII 166 (270)
Q Consensus 90 ~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~---~~l~ 166 (270)
++++++++.+.+.|++-|.+-=- -+....+ +.++..+ .++.+.+...+.++++.++...+..+.+ ....
T Consensus 80 ~al~~lv~~li~~Gv~Gl~v~GT-TGE~~~L---s~eEr~~----vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~ 151 (360)
T 4dpp_A 80 EAYDDLVNIQIQNGAEGVIVGGT-TGEGQLM---SWDEHIM----LIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGF 151 (360)
T ss_dssp HHHHHHHHHHHHTTCCEEEESST-TTTGGGS---CHHHHHH----HHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEeccc-ccChhhC---CHHHHHH----HHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHH
Confidence 46677778888999997665310 0000111 1122222 2222222222346777877644555444 3456
Q ss_pred hCCCCEEEEE
Q 024250 167 DMDADVITIE 176 (270)
Q Consensus 167 ~~~vd~l~ld 176 (270)
++++|++.+=
T Consensus 152 ~~Gadavlvv 161 (360)
T 4dpp_A 152 AVGMHAALHI 161 (360)
T ss_dssp HTTCSEEEEE
T ss_pred HcCCCEEEEc
Confidence 7899998875
No 112
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=46.93 E-value=1.3e+02 Score=25.48 Aligned_cols=61 Identities=13% Similarity=0.180 Sum_probs=37.4
Q ss_pred hhHHHHHHhCCCCEEEEEccCCCc----------------hhHHHhhhcccCCCeeeceEecCCCCCCCCHHHHHHHHHH
Q 024250 159 NDIIHSIIDMDADVITIENSRSDE----------------KLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINK 222 (270)
Q Consensus 159 ~~~~~~l~~~~vd~l~ld~~~~~~----------------~~l~~l~~~~~~~~~l~~GvVd~~~~~~e~~e~v~~~i~~ 222 (270)
.+.+..|.+.+++.+.+.....+. +.++.+.+ .|-.+..|++-+.. .++.+++.+.++.
T Consensus 142 ~e~l~~L~~ag~~~v~i~let~~~~~~~~i~~~~~~~~~~~~i~~~~~---~Gi~v~~~~i~G~p--~et~e~~~~~~~~ 216 (348)
T 3iix_A 142 REYYEKWKEAGADRYLLRHETANPVLHRKLRPDTSFENRLNCLLTLKE---LGYETGAGSMVGLP--GQTIDDLVDDLLF 216 (348)
T ss_dssp HHHHHHHHHHTCCEEECCCBCSCHHHHHHHSTTSCHHHHHHHHHHHHH---TTCEEEECBEESCT--TCCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEeeeeeeCCHHHHHHhCCCcCHHHHHHHHHHHHH---hCCeeccceEEeCC--CCCHHHHHHHHHH
Confidence 467889999999998876543221 11222232 24457777766652 3677777776666
Q ss_pred Hh
Q 024250 223 ML 224 (270)
Q Consensus 223 ~~ 224 (270)
+.
T Consensus 217 l~ 218 (348)
T 3iix_A 217 LK 218 (348)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 113
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=46.75 E-value=76 Score=27.51 Aligned_cols=79 Identities=10% Similarity=0.079 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHH---HHHH
Q 024250 90 LAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDII---HSII 166 (270)
Q Consensus 90 ~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~---~~l~ 166 (270)
+.++++++.+.+.|++-|.+--- -.....+ +.++..+ +.+...+. ..+.++++.++...+..+.+ ....
T Consensus 55 ~~l~~lv~~li~~Gv~Gl~v~Gt-TGE~~~L---s~eEr~~-vi~~~ve~---~~grvpViaGvg~~st~eai~la~~A~ 126 (332)
T 2r8w_A 55 EAFSALIARLDAAEVDSVGILGS-TGIYMYL---TREERRR-AIEAAATI---LRGRRTLMAGIGALRTDEAVALAKDAE 126 (332)
T ss_dssp HHHHHHHHHHHHHTCSEEEESST-TTTGGGS---CHHHHHH-HHHHHHHH---HTTSSEEEEEECCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECcc-ccChhhC---CHHHHHH-HHHHHHHH---hCCCCcEEEecCCCCHHHHHHHHHHHH
Confidence 36677778888899997655310 0000101 1122222 22222222 22346788887744555444 3456
Q ss_pred hCCCCEEEEE
Q 024250 167 DMDADVITIE 176 (270)
Q Consensus 167 ~~~vd~l~ld 176 (270)
++++|++.+=
T Consensus 127 ~~Gadavlv~ 136 (332)
T 2r8w_A 127 AAGADALLLA 136 (332)
T ss_dssp HHTCSEEEEC
T ss_pred hcCCCEEEEC
Confidence 7899998874
No 114
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=46.64 E-value=59 Score=27.60 Aligned_cols=80 Identities=15% Similarity=0.064 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHH---HHHH
Q 024250 90 LAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDII---HSII 166 (270)
Q Consensus 90 ~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~---~~l~ 166 (270)
+.++++++.+.+.|++-|.+-=- -+....+ +.++..+ +.+...+. ..+.++++.|+...+..+.+ ....
T Consensus 23 ~~l~~lv~~li~~Gv~gl~v~Gt-tGE~~~L---t~~Er~~-v~~~~~~~---~~grvpviaGvg~~~t~~ai~la~~a~ 94 (292)
T 3daq_A 23 EALKAHVNFLLENNAQAIIVNGT-TAESPTL---TTDEKEL-ILKTVIDL---VDKRVPVIAGTGTNDTEKSIQASIQAK 94 (292)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSG-GGTGGGS---CHHHHHH-HHHHHHHH---HTTSSCEEEECCCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECcc-ccccccC---CHHHHHH-HHHHHHHH---hCCCCcEEEeCCcccHHHHHHHHHHHH
Confidence 46777788888999997655310 0111111 1122222 22222222 22346678887644555444 3456
Q ss_pred hCCCCEEEEEc
Q 024250 167 DMDADVITIEN 177 (270)
Q Consensus 167 ~~~vd~l~ld~ 177 (270)
++++|++.+=.
T Consensus 95 ~~Gadavlv~~ 105 (292)
T 3daq_A 95 ALGADAIMLIT 105 (292)
T ss_dssp HHTCSEEEEEC
T ss_pred HcCCCEEEECC
Confidence 78999988753
No 115
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=46.62 E-value=1.2e+02 Score=24.78 Aligned_cols=70 Identities=13% Similarity=0.031 Sum_probs=39.2
Q ss_pred HHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHHHHHhCCCCEEEE
Q 024250 96 VEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITI 175 (270)
Q Consensus 96 ~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~~l~~~~vd~l~l 175 (270)
++.+.++|++.|++-++...... .... .+.++++.+..+ +++++--...+. +-+..++++++|++.+
T Consensus 36 a~~~~~~Ga~~i~v~d~~~~~~~--~g~~--------~~~i~~i~~~~~--iPvi~~ggi~~~-~~i~~~~~~Gad~v~l 102 (266)
T 2w6r_A 36 VVEVEKRGAGEILLTSIDRDGTK--SGYD--------TEMIRFVRPLTT--LPIIASGGAGKM-EHFLEAFLAGADKALA 102 (266)
T ss_dssp HHHHHHHTCSEEEEEETTTSSCS--SCCC--------HHHHHHHGGGCC--SCEEEESCCCST-HHHHHHHHHTCSEEEC
T ss_pred HHHHHHCCCCEEEEEecCcccCC--Cccc--------HHHHHHHHHhcC--CCEEEECCCCCH-HHHHHHHHcCCcHhhh
Confidence 45566789999999776543211 1111 234444544333 445443222233 3455677899999998
Q ss_pred Ecc
Q 024250 176 ENS 178 (270)
Q Consensus 176 d~~ 178 (270)
-..
T Consensus 103 g~~ 105 (266)
T 2w6r_A 103 ASV 105 (266)
T ss_dssp CCC
T ss_pred hHH
Confidence 754
No 116
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=46.40 E-value=94 Score=25.80 Aligned_cols=81 Identities=9% Similarity=0.026 Sum_probs=48.2
Q ss_pred ceEE-EeeccCCchhHHHHHHhCCCCE--EEEEccCCCchhHHHhhhcccCCCeeeceEecCCCCCCCCHHHHHHHHHHH
Q 024250 147 TQIH-THMCYSNFNDIIHSIIDMDADV--ITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKM 223 (270)
Q Consensus 147 ~~i~-lH~c~g~~~~~~~~l~~~~vd~--l~ld~~~~~~~~l~~l~~~~~~~~~l~~GvVd~~~~~~e~~e~v~~~i~~~ 223 (270)
.+++ +|+- ....+.++.|.+.+... +---| .++.+.++.+.+ .|-.+++|-+-+ . .+.++++
T Consensus 118 lPviSiH~r-~a~~~~~~il~~~~~~~~~v~H~f-sG~~e~a~~~l~---~G~yis~~g~~~------~----~~~~~~~ 182 (254)
T 3gg7_A 118 GRILSIHSR-RAESEVLNCLEANPRSGTPILHWY-SGSVTELRRAIS---LGCWFSVGPTMV------R----TQKGAAL 182 (254)
T ss_dssp CEEEEEECT-TCHHHHHHHHHHCGGGEEEEEETC-CSCHHHHHHHHH---TTCEEEECHHHH------T----SHHHHHH
T ss_pred CCEEEEEcC-CcHHHHHHHHHHcCCCCcEEEEeC-CCCHHHHHHHHc---CCcEEEECcccC------c----hHHHHHH
Confidence 5787 9965 55677888887775432 22222 234444444443 244454442211 1 2345677
Q ss_pred hccccCCceEecCCCCCCC
Q 024250 224 LAVLETNILWVNPDCGLKT 242 (270)
Q Consensus 224 ~~~~~~~~l~vsp~Cgl~~ 242 (270)
++.+|.+++++-+||...+
T Consensus 183 v~~ip~drlLlETD~P~~~ 201 (254)
T 3gg7_A 183 IRSMPRDRVLTETDGPFLE 201 (254)
T ss_dssp HHHSCGGGEEECCCTTTSE
T ss_pred HHHcCCCeEEEeCCCCccc
Confidence 7778999999999998753
No 117
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=45.90 E-value=66 Score=27.66 Aligned_cols=80 Identities=11% Similarity=0.048 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHH---HHHH
Q 024250 90 LAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDII---HSII 166 (270)
Q Consensus 90 ~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~---~~l~ 166 (270)
+.++++++.+.+.|++-|.+-- +-+....+ +.++..+ +.+...+. ..+.++++.++...+..+.+ ....
T Consensus 44 ~~l~~lv~~li~~Gv~Gl~v~G-tTGE~~~L---s~~Er~~-v~~~~v~~---~~grvpViaGvg~~st~eai~la~~A~ 115 (314)
T 3qze_A 44 DSLAKLVDFHLQEGTNAIVAVG-TTGESATL---DVEEHIQ-VIRRVVDQ---VKGRIPVIAGTGANSTREAVALTEAAK 115 (314)
T ss_dssp HHHHHHHHHHHHHTCCEEEESS-GGGTGGGC---CHHHHHH-HHHHHHHH---HTTSSCEEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECc-cccChhhC---CHHHHHH-HHHHHHHH---hCCCCcEEEeCCCcCHHHHHHHHHHHH
Confidence 4666777778889999765531 01111111 1222222 22222222 22236677887744555443 4557
Q ss_pred hCCCCEEEEEc
Q 024250 167 DMDADVITIEN 177 (270)
Q Consensus 167 ~~~vd~l~ld~ 177 (270)
++++|++.+=.
T Consensus 116 ~~Gadavlv~~ 126 (314)
T 3qze_A 116 SGGADACLLVT 126 (314)
T ss_dssp HTTCSEEEEEC
T ss_pred HcCCCEEEEcC
Confidence 79999988753
No 118
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=45.66 E-value=83 Score=26.97 Aligned_cols=79 Identities=24% Similarity=0.211 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHH---HHH
Q 024250 90 LAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIH---SII 166 (270)
Q Consensus 90 ~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~---~l~ 166 (270)
+.++++++.+.+.|++-|.+--- -.....+ +.++..+ .++.+.+...+.++++.++.. +..+.++ ...
T Consensus 33 ~~l~~lv~~li~~Gv~gl~v~Gt-TGE~~~L---s~eEr~~----vi~~~~~~~~grvpViaGvg~-st~~ai~la~~A~ 103 (314)
T 3d0c_A 33 KGLDDNVEFLLQNGIEVIVPNGN-TGEFYAL---TIEEAKQ----VATRVTELVNGRATVVAGIGY-SVDTAIELGKSAI 103 (314)
T ss_dssp HHHHHHHHHHHHTTCSEECTTSG-GGTGGGS---CHHHHHH----HHHHHHHHHTTSSEEEEEECS-SHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECcc-cCChhhC---CHHHHHH----HHHHHHHHhCCCCeEEecCCc-CHHHHHHHHHHHH
Confidence 46677788888999987554310 0000111 1122222 222222222234678888886 7765444 456
Q ss_pred hCCCCEEEEEc
Q 024250 167 DMDADVITIEN 177 (270)
Q Consensus 167 ~~~vd~l~ld~ 177 (270)
++++|++.+=.
T Consensus 104 ~~Gadavlv~~ 114 (314)
T 3d0c_A 104 DSGADCVMIHQ 114 (314)
T ss_dssp HTTCSEEEECC
T ss_pred HcCCCEEEECC
Confidence 78999988753
No 119
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=45.26 E-value=75 Score=27.33 Aligned_cols=80 Identities=15% Similarity=0.048 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHH---HHHH
Q 024250 90 LAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDII---HSII 166 (270)
Q Consensus 90 ~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~---~~l~ 166 (270)
+.++++++.+.+.|++-|.+--- -.....+ +.++..+ +.+...+. ..+.++++.++...+..+.+ ....
T Consensus 43 ~~l~~li~~li~~Gv~Gl~v~Gt-TGE~~~L---s~~Er~~-v~~~~v~~---~~grvpViaGvg~~st~~ai~la~~A~ 114 (315)
T 3si9_A 43 KAFCNFVEWQITQGINGVSPVGT-TGESPTL---THEEHKR-IIELCVEQ---VAKRVPVVAGAGSNSTSEAVELAKHAE 114 (315)
T ss_dssp HHHHHHHHHHHHTTCSEEECSST-TTTGGGS---CHHHHHH-HHHHHHHH---HTTSSCBEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEeCcc-ccCcccc---CHHHHHH-HHHHHHHH---hCCCCcEEEeCCCCCHHHHHHHHHHHH
Confidence 46677788888999997654310 0000111 1222222 22222222 22235677777644555433 4567
Q ss_pred hCCCCEEEEEc
Q 024250 167 DMDADVITIEN 177 (270)
Q Consensus 167 ~~~vd~l~ld~ 177 (270)
++++|++.+=.
T Consensus 115 ~~Gadavlv~~ 125 (315)
T 3si9_A 115 KAGADAVLVVT 125 (315)
T ss_dssp HTTCSEEEEEC
T ss_pred hcCCCEEEECC
Confidence 79999988753
No 120
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=45.21 E-value=90 Score=26.40 Aligned_cols=80 Identities=6% Similarity=0.101 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHH-cCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHH---HHH
Q 024250 90 LAIKDEVEDLEK-AGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDII---HSI 165 (270)
Q Consensus 90 ~~~~~~~~~l~~-~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~---~~l 165 (270)
+.++++++.+.+ .|++-|.+--- -.....+ +.++..+ +.+...+. ..+.++++.++...+..+.+ ...
T Consensus 24 ~~l~~lv~~li~~~Gv~gl~~~Gt-tGE~~~L---s~~Er~~-v~~~~~~~---~~grvpviaGvg~~~t~~ai~la~~a 95 (293)
T 1f6k_A 24 KGLRQIIRHNIDKMKVDGLYVGGS-TGENFML---STEEKKE-IFRIAKDE---AKDQIALIAQVGSVNLKEAVELGKYA 95 (293)
T ss_dssp HHHHHHHHHHHHTSCCSEEEESSG-GGTGGGS---CHHHHHH-HHHHHHHH---HTTSSEEEEECCCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCcEEEeCcc-ccchhhC---CHHHHHH-HHHHHHHH---hCCCCeEEEecCCCCHHHHHHHHHHH
Confidence 466777888889 99997655310 0111111 1122222 22222222 22346788887744555444 345
Q ss_pred HhCCCCEEEEEc
Q 024250 166 IDMDADVITIEN 177 (270)
Q Consensus 166 ~~~~vd~l~ld~ 177 (270)
.++++|++.+=.
T Consensus 96 ~~~Gadavlv~~ 107 (293)
T 1f6k_A 96 TELGYDCLSAVT 107 (293)
T ss_dssp HHHTCSEEEEEC
T ss_pred HhcCCCEEEECC
Confidence 678999988753
No 121
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=44.52 E-value=1.5e+02 Score=26.67 Aligned_cols=93 Identities=16% Similarity=0.127 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHHHHHcCCCEEEeccCc-------cccCCCCC----CccH----HHHHHHHHHHHHHHhc-CCCCCce
Q 024250 85 CYQIALAIKDEVEDLEKAGINVIQIDEAA-------LREGLPLR----KSEH----AFYLDWAVHSFRITNC-GVQDTTQ 148 (270)
Q Consensus 85 ~~~l~~~~~~~~~~l~~~G~~~IQiDEP~-------l~~~l~~~----~~~~----~~~~~~~~~~~~~~~~-~~~~~~~ 148 (270)
++.+.+.+.+..+...++|+|.|+|.--- |+.....+ .+.. .++.-++++++++.+. ..+.+.+
T Consensus 165 I~~ii~~F~~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~~~~f~ 244 (419)
T 3l5a_A 165 INSIIQQYRDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFI 244 (419)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHCCTTCE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhhhcCCCee
Confidence 56777778888888889999999998531 11111111 1111 1233344444444431 1122345
Q ss_pred EEEeecc--------C----CchhHHHHHHh-CCCCEEEEEc
Q 024250 149 IHTHMCY--------S----NFNDIIHSIID-MDADVITIEN 177 (270)
Q Consensus 149 i~lH~c~--------g----~~~~~~~~l~~-~~vd~l~ld~ 177 (270)
|++=+.. | +...+...|.+ .++|.|++-.
T Consensus 245 v~vRis~~~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~ 286 (419)
T 3l5a_A 245 LGFRATPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIAS 286 (419)
T ss_dssp EEEEECSCEEETTEEEECHHHHHHHHHHHHHHSCCCCEEECC
T ss_pred EEEecccccccCCCCCCCHHHHHHHHHHHHhhcCCcEEEEee
Confidence 5555442 1 11246677888 9999999864
No 122
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=44.22 E-value=86 Score=26.75 Aligned_cols=80 Identities=8% Similarity=-0.022 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHH---HHHH
Q 024250 90 LAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDII---HSII 166 (270)
Q Consensus 90 ~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~---~~l~ 166 (270)
+.++++++.+.+.|++-|.+--- -.....+ +.++. ..+.+...+... +.++++.++...+..+.+ ....
T Consensus 33 ~~l~~lv~~li~~Gv~gl~v~Gt-TGE~~~L---s~eEr-~~vi~~~~~~~~---grvpViaGvg~~st~~ai~la~~A~ 104 (306)
T 1o5k_A 33 ESYERLVRYQLENGVNALIVLGT-TGESPTV---NEDER-EKLVSRTLEIVD---GKIPVIVGAGTNSTEKTLKLVKQAE 104 (306)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSG-GGTGGGC---CHHHH-HHHHHHHHHHHT---TSSCEEEECCCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEeCcc-ccchhhC---CHHHH-HHHHHHHHHHhC---CCCeEEEcCCCccHHHHHHHHHHHH
Confidence 46677788888999997655310 0000111 11222 222222222222 235677887744555444 3456
Q ss_pred hCCCCEEEEEc
Q 024250 167 DMDADVITIEN 177 (270)
Q Consensus 167 ~~~vd~l~ld~ 177 (270)
++++|++.+=.
T Consensus 105 ~~Gadavlv~~ 115 (306)
T 1o5k_A 105 KLGANGVLVVT 115 (306)
T ss_dssp HHTCSEEEEEC
T ss_pred hcCCCEEEECC
Confidence 78999988753
No 123
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=44.08 E-value=87 Score=26.48 Aligned_cols=80 Identities=16% Similarity=0.017 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHH---HHHH
Q 024250 90 LAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDII---HSII 166 (270)
Q Consensus 90 ~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~---~~l~ 166 (270)
+.++++++.+.+.|++-|.+--- -.....+ +.++..+ +.+...+... +.++++.++...+..+.+ ....
T Consensus 21 ~~l~~lv~~li~~Gv~gl~~~Gt-tGE~~~L---s~~Er~~-v~~~~~~~~~---gr~pviaGvg~~~t~~ai~la~~A~ 92 (292)
T 2vc6_A 21 VALHDLVEWQIEEGSFGLVPCGT-TGESPTL---SKSEHEQ-VVEITIKTAN---GRVPVIAGAGSNSTAEAIAFVRHAQ 92 (292)
T ss_dssp HHHHHHHHHHHHTTCSEEETTSG-GGTGGGS---CHHHHHH-HHHHHHHHHT---TSSCBEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECcc-ccChhhC---CHHHHHH-HHHHHHHHhC---CCCcEEEecCCccHHHHHHHHHHHH
Confidence 46777788888999997654310 0000111 1222222 2222222222 235677887744555444 3456
Q ss_pred hCCCCEEEEEc
Q 024250 167 DMDADVITIEN 177 (270)
Q Consensus 167 ~~~vd~l~ld~ 177 (270)
++++|++.+=.
T Consensus 93 ~~Gadavlv~~ 103 (292)
T 2vc6_A 93 NAGADGVLIVS 103 (292)
T ss_dssp HTTCSEEEEEC
T ss_pred HcCCCEEEEcC
Confidence 79999988754
No 124
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=43.68 E-value=77 Score=27.65 Aligned_cols=80 Identities=16% Similarity=-0.012 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHH---HHH
Q 024250 90 LAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIH---SII 166 (270)
Q Consensus 90 ~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~---~l~ 166 (270)
+.++++++.+.+.|++-|.+--- -.....+ +.++..+ +.+...+... +.++++.++...+..+.++ ...
T Consensus 52 ~~l~~lv~~li~~Gv~Gl~v~Gt-TGE~~~L---s~eEr~~-vi~~~ve~~~---grvpViaGvg~~st~eai~la~~A~ 123 (343)
T 2v9d_A 52 PGTAALIDDLIKAGVDGLFFLGS-GGEFSQL---GAEERKA-IARFAIDHVD---RRVPVLIGTGGTNARETIELSQHAQ 123 (343)
T ss_dssp HHHHHHHHHHHHTTCSCEEESST-TTTGGGS---CHHHHHH-HHHHHHHHHT---TSSCEEEECCSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEeCcc-ccChhhC---CHHHHHH-HHHHHHHHhC---CCCcEEEecCCCCHHHHHHHHHHHH
Confidence 46677788888999987655310 0000101 1122222 2222222222 2466788877445554443 456
Q ss_pred hCCCCEEEEEc
Q 024250 167 DMDADVITIEN 177 (270)
Q Consensus 167 ~~~vd~l~ld~ 177 (270)
++++|++.+=.
T Consensus 124 ~~Gadavlv~~ 134 (343)
T 2v9d_A 124 QAGADGIVVIN 134 (343)
T ss_dssp HHTCSEEEEEC
T ss_pred hcCCCEEEECC
Confidence 78999987753
No 125
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=43.57 E-value=90 Score=26.27 Aligned_cols=10 Identities=10% Similarity=0.212 Sum_probs=4.8
Q ss_pred HhCCCCEEEE
Q 024250 166 IDMDADVITI 175 (270)
Q Consensus 166 ~~~~vd~l~l 175 (270)
.+++++.+..
T Consensus 221 i~aG~~~vd~ 230 (295)
T 1ydn_A 221 LEKGLRVFDA 230 (295)
T ss_dssp HHHTCCEEEE
T ss_pred HHhCCCEEEe
Confidence 4455554443
No 126
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=43.41 E-value=93 Score=26.64 Aligned_cols=77 Identities=14% Similarity=0.066 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHH---HHHH
Q 024250 90 LAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDII---HSII 166 (270)
Q Consensus 90 ~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~---~~l~ 166 (270)
+.++++++.+.+.|++-|.+-= +-+....+ +.++.. +.++.+.+.. ++++++.++...+..+.+ ....
T Consensus 29 ~~l~~lv~~li~~Gv~Gl~v~G-tTGE~~~L---t~~Er~----~v~~~~v~~~-grvpViaGvg~~~t~~ai~la~~A~ 99 (313)
T 3dz1_A 29 VSIDRLTDFYAEVGCEGVTVLG-ILGEAPKL---DAAEAE----AVATRFIKRA-KSMQVIVGVSAPGFAAMRRLARLSM 99 (313)
T ss_dssp HHHHHHHHHHHHTTCSEEEEST-GGGTGGGS---CHHHHH----HHHHHHHHHC-TTSEEEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEeCc-cCcChhhC---CHHHHH----HHHHHHHHHc-CCCcEEEecCCCCHHHHHHHHHHHH
Confidence 4667778888899999765531 00110111 122222 2333333333 346788887644555433 3456
Q ss_pred hCCCCEEEE
Q 024250 167 DMDADVITI 175 (270)
Q Consensus 167 ~~~vd~l~l 175 (270)
++++|++.+
T Consensus 100 ~~Gadavlv 108 (313)
T 3dz1_A 100 DAGAAGVMI 108 (313)
T ss_dssp HHTCSEEEE
T ss_pred HcCCCEEEE
Confidence 788888877
No 127
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=43.35 E-value=1.5e+02 Score=25.05 Aligned_cols=149 Identities=9% Similarity=0.070 Sum_probs=81.7
Q ss_pred HHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHHHHHhCCCC
Q 024250 92 IKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDAD 171 (270)
Q Consensus 92 ~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~~l~~~~vd 171 (270)
..+.++.|.++|+++|.+==|.-+...+.. .+. .+.++.+.+ .+ ++++.+|+. +.. -++...+++++
T Consensus 32 k~~i~~~L~~~Gv~~IE~g~~~~~~~~~~~-~d~-------~~~~~~~~~-~~-~~~~~~l~~--~~~-~i~~a~~aG~~ 98 (302)
T 2ftp_A 32 KIRLVDDLSAAGLDYIEVGSFVSPKWVPQM-AGS-------AEVFAGIRQ-RP-GVTYAALAP--NLK-GFEAALESGVK 98 (302)
T ss_dssp HHHHHHHHHHTTCSEEEEEECSCTTTCGGG-TTH-------HHHHHHSCC-CT-TSEEEEECC--SHH-HHHHHHHTTCC
T ss_pred HHHHHHHHHHcCcCEEEECCCcCccccccc-cCH-------HHHHHHhhh-cC-CCEEEEEeC--CHH-HHHHHHhCCcC
Confidence 344567788899998776422111111110 011 123333332 22 466777763 553 46778889999
Q ss_pred EEEEEccCCC-----------chhHHHhhhcc----cCCCeeeceEecCCC---CCCCCHHHHHHHHHHHhccccCCceE
Q 024250 172 VITIENSRSD-----------EKLLSVFREGV----KYGAGIGPGVYDIHS---PRIPSTEEIADRINKMLAVLETNILW 233 (270)
Q Consensus 172 ~l~ld~~~~~-----------~~~l~~l~~~~----~~~~~l~~GvVd~~~---~~~e~~e~v~~~i~~~~~~~~~~~l~ 233 (270)
.+++-...++ .++++...+.+ ..+..+-..+-.... ....+++.+.+.++.+.+ .|.+.+.
T Consensus 99 ~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~-~G~d~i~ 177 (302)
T 2ftp_A 99 EVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQ-MGCYEVS 177 (302)
T ss_dssp EEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHH-TTCSEEE
T ss_pred EEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHH-cCCCEEE
Confidence 9997332221 12333332210 234455322211111 125789999999888765 4888998
Q ss_pred ecCCCCCCCCCHhHHHHHHHHHH
Q 024250 234 VNPDCGLKTRKYTEVKPALSNMV 256 (270)
Q Consensus 234 vsp~Cgl~~~~~~~a~~kL~~l~ 256 (270)
+...=|. .+|....+-++.+.
T Consensus 178 l~DT~G~--~~P~~~~~lv~~l~ 198 (302)
T 2ftp_A 178 LGDTIGV--GTAGATRRLIEAVA 198 (302)
T ss_dssp EEESSSC--CCHHHHHHHHHHHT
T ss_pred EeCCCCC--cCHHHHHHHHHHHH
Confidence 8877776 47776666666554
No 128
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=43.19 E-value=1.4e+02 Score=27.33 Aligned_cols=74 Identities=15% Similarity=0.166 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEee--ccCCchhHHHHHHhC
Q 024250 91 AIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHM--CYSNFNDIIHSIIDM 168 (270)
Q Consensus 91 ~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~--c~g~~~~~~~~l~~~ 168 (270)
.+.+.++++.++||++|.|-+..=.. .|....+. +.++++. ++ .++.+|+ -+|---.+.-...++
T Consensus 159 ~~~~~a~~l~~~Gad~I~l~DT~G~~-------~P~~v~~l-v~~l~~~---~~--~~i~~H~Hnd~GlAvAN~laAv~A 225 (464)
T 2nx9_A 159 TWVDVAQQLAELGVDSIALKDMAGIL-------TPYAAEEL-VSTLKKQ---VD--VELHLHCHSTAGLADMTLLKAIEA 225 (464)
T ss_dssp HHHHHHHHHHHTTCSEEEEEETTSCC-------CHHHHHHH-HHHHHHH---CC--SCEEEEECCTTSCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCCEEEEcCCCCCc-------CHHHHHHH-HHHHHHh---cC--CeEEEEECCCCChHHHHHHHHHHh
Confidence 44555667778899998887743321 23333232 3333332 22 3456664 334322233344778
Q ss_pred CCCEEEEEc
Q 024250 169 DADVITIEN 177 (270)
Q Consensus 169 ~vd~l~ld~ 177 (270)
+++.+..=.
T Consensus 226 Ga~~VD~ti 234 (464)
T 2nx9_A 226 GVDRVDTAI 234 (464)
T ss_dssp TCSEEEEBC
T ss_pred CCCEEEEec
Confidence 888765443
No 129
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=43.07 E-value=63 Score=27.69 Aligned_cols=21 Identities=14% Similarity=0.395 Sum_probs=15.9
Q ss_pred CCc-hhHHHHHHhCCCCEEEEE
Q 024250 156 SNF-NDIIHSIIDMDADVITIE 176 (270)
Q Consensus 156 g~~-~~~~~~l~~~~vd~l~ld 176 (270)
|+. .+.+..+.++++|.|++=
T Consensus 259 GGIt~~~i~~~a~~GvD~isvG 280 (296)
T 1qap_A 259 GNVTAETLREFAETGVDFISVG 280 (296)
T ss_dssp CCSCHHHHHHHHHTTCSEEECS
T ss_pred CCCCHHHHHHHHHcCCCEEEEe
Confidence 555 357788899999998863
No 130
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1
Probab=42.99 E-value=1.2e+02 Score=26.51 Aligned_cols=74 Identities=9% Similarity=0.091 Sum_probs=43.9
Q ss_pred HHHcCCCEEEeccCccccCC----CCCCccHHHH---HHHHHHHHHHHhcCCCCCceEEEeeccC-------------Cc
Q 024250 99 LEKAGINVIQIDEAALREGL----PLRKSEHAFY---LDWAVHSFRITNCGVQDTTQIHTHMCYS-------------NF 158 (270)
Q Consensus 99 l~~~G~~~IQiDEP~l~~~l----~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~lH~c~g-------------~~ 158 (270)
|.++|.++|.||+-...... +..+ +++.| ++...+.++. . +++++||...| .+
T Consensus 40 l~~~G~~~v~iDdgW~~~~rd~~G~~~~-~~~~FP~Gl~~l~~~ih~--~----Glk~Giw~~~~~~~~~~~~pg~~~~~ 112 (362)
T 1uas_A 40 LAKLGYQYVNIDDCWAEYSRDSQGNFVP-NRQTFPSGIKALADYVHA--K----GLKLGIYSDAGSQTCSNKMPGSLDHE 112 (362)
T ss_dssp HHHHTCCEEECCSSCBCSSCCTTSCCCB-CTTTCTTCHHHHHHHHHH--T----TCEEEEEEESSSBCTTSSSBCCTTCH
T ss_pred chhcCCcEEEECCCcCCCCCCCCCCeeE-ChhccCccHHHHHHHHHH--C----CCEeEEEeeCCCccccCCCCCchhHH
Confidence 47789999999997664210 0000 11111 2333333333 2 35677776543 22
Q ss_pred hhHHHHHHhCCCCEEEEEccC
Q 024250 159 NDIIHSIIDMDADVITIENSR 179 (270)
Q Consensus 159 ~~~~~~l~~~~vd~l~ld~~~ 179 (270)
......+.+.+||.|-+|+..
T Consensus 113 ~~~~~~~~~wGvdyvK~D~~~ 133 (362)
T 1uas_A 113 EQDVKTFASWGVDYLKYDNCN 133 (362)
T ss_dssp HHHHHHHHHHTCCEEEEECCC
T ss_pred HHHHHHHHHcCCCEEEECccC
Confidence 346678899999999999965
No 131
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=42.26 E-value=83 Score=26.73 Aligned_cols=80 Identities=13% Similarity=-0.033 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHH---HHHH
Q 024250 90 LAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDII---HSII 166 (270)
Q Consensus 90 ~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~---~~l~ 166 (270)
+.++++++.+.+.|++-|.+--- -.....+ +.++..+ +.+...+... +.++++.++...+..+.+ ....
T Consensus 21 ~~l~~lv~~li~~Gv~gi~v~Gt-tGE~~~L---s~~Er~~-v~~~~~~~~~---grvpviaGvg~~~t~~ai~la~~A~ 92 (297)
T 2rfg_A 21 KALAGLVDWQIKHGAHGLVPVGT-TGESPTL---TEEEHKR-VVALVAEQAQ---GRVPVIAGAGSNNPVEAVRYAQHAQ 92 (297)
T ss_dssp HHHHHHHHHHHHTTCSEEECSSG-GGTGGGS---CHHHHHH-HHHHHHHHHT---TSSCBEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECcc-ccchhhC---CHHHHHH-HHHHHHHHhC---CCCeEEEccCCCCHHHHHHHHHHHH
Confidence 46677788888999997654310 0011111 1122222 2222222222 235677887744555444 3456
Q ss_pred hCCCCEEEEEc
Q 024250 167 DMDADVITIEN 177 (270)
Q Consensus 167 ~~~vd~l~ld~ 177 (270)
++++|++.+=.
T Consensus 93 ~~Gadavlv~~ 103 (297)
T 2rfg_A 93 QAGADAVLCVA 103 (297)
T ss_dssp HHTCSEEEECC
T ss_pred hcCCCEEEEcC
Confidence 78999988753
No 132
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=41.08 E-value=73 Score=27.44 Aligned_cols=121 Identities=10% Similarity=0.010 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHH---HHHH
Q 024250 90 LAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDII---HSII 166 (270)
Q Consensus 90 ~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~---~~l~ 166 (270)
+.++++++.+.+.|++-|.+-=- -.....+ +.++..+ +.+...+. ..+.++++.|+...+..+.+ ....
T Consensus 32 ~~l~~lv~~li~~Gv~gl~v~Gt-TGE~~~L---s~~Er~~-v~~~~~~~---~~grvpviaGvg~~~t~~ai~la~~a~ 103 (318)
T 3qfe_A 32 ASQERYYAYLARSGLTGLVILGT-NAEAFLL---TREERAQ-LIATARKA---VGPDFPIMAGVGAHSTRQVLEHINDAS 103 (318)
T ss_dssp HHHHHHHHHHHTTTCSEEEESSG-GGTGGGS---CHHHHHH-HHHHHHHH---HCTTSCEEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEeCcc-ccChhhC---CHHHHHH-HHHHHHHH---hCCCCcEEEeCCCCCHHHHHHHHHHHH
Confidence 46777788888999997655310 0000111 1122222 22222222 22346678887644555443 4556
Q ss_pred hCCCCEEEEEcc---C--CCc-hhHHHhhhcc-cCCCeeeceEecCCC-CCCCCHHHHHH
Q 024250 167 DMDADVITIENS---R--SDE-KLLSVFREGV-KYGAGIGPGVYDIHS-PRIPSTEEIAD 218 (270)
Q Consensus 167 ~~~vd~l~ld~~---~--~~~-~~l~~l~~~~-~~~~~l~~GvVd~~~-~~~e~~e~v~~ 218 (270)
++++|++.+=.. . .+. +..+.++... ..+..+.+=.+++++ -..=+++.+.+
T Consensus 104 ~~Gadavlv~~P~y~~kp~~~~~l~~~f~~ia~a~~lPiilYn~P~~t~g~~l~~~~~~~ 163 (318)
T 3qfe_A 104 VAGANYVLVLPPAYFGKATTPPVIKSFFDDVSCQSPLPVVIYNFPGVCNGIDLDSDMITT 163 (318)
T ss_dssp HHTCSEEEECCCCC---CCCHHHHHHHHHHHHHHCSSCEEEEECCC----CCCCHHHHHH
T ss_pred HcCCCEEEEeCCcccCCCCCHHHHHHHHHHHHhhCCCCEEEEeCCcccCCCCCCHHHHHH
Confidence 789999887432 1 122 2334444320 124556666676654 22234444443
No 133
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=40.53 E-value=1.5e+02 Score=24.12 Aligned_cols=80 Identities=13% Similarity=0.038 Sum_probs=45.0
Q ss_pred ceEEEeeccCCchhHHHHHHhCCCCEEEEEccCCCchhHHHhhhcccCCCeeeceEecCCCCCCCCHHHHHHHHHHHhcc
Q 024250 147 TQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAV 226 (270)
Q Consensus 147 ~~i~lH~c~g~~~~~~~~l~~~~vd~l~ld~~~~~~~~l~~l~~~~~~~~~l~~GvVd~~~~~~e~~e~v~~~i~~~~~~ 226 (270)
.++.+|+- ....+.++.+.+.+...+-+=...++.+.++.+.+ .|-.+.+| +.... + . .++++++.
T Consensus 140 lPv~iH~~-~a~~~~~~il~~~~~~~~v~H~~~g~~~~~~~~~~---~g~~i~~~---g~~~~--~-~----~~~~~~~~ 205 (272)
T 2y1h_A 140 LPVNVHSR-SAGRPTINLLQEQGAEKVLLHAFDGRPSVAMEGVR---AGYFFSIP---PSIIR--S-G----QKQKLVKQ 205 (272)
T ss_dssp CCEEEECT-TCHHHHHHHHHHTTCCSEEEETCCSCHHHHHHHHH---TTCEEEEC---GGGGT--C-H----HHHHHHHH
T ss_pred CcEEEEeC-CcHHHHHHHHHhCCCCCEEEEccCCCHHHHHHHHH---CCCEEEEC---CcccC--c-H----HHHHHHHh
Confidence 56899964 45567778887776433333112233444444443 23334333 21111 1 1 45666667
Q ss_pred ccCCceEecCCCCC
Q 024250 227 LETNILWVNPDCGL 240 (270)
Q Consensus 227 ~~~~~l~vsp~Cgl 240 (270)
++.+++++.+|+..
T Consensus 206 ~~~drll~eTD~P~ 219 (272)
T 2y1h_A 206 LPLTSICLETDSPA 219 (272)
T ss_dssp SCGGGEEECCCTTS
T ss_pred CCHHHEEEecCCCC
Confidence 78899999999975
No 134
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=39.63 E-value=1.7e+02 Score=24.56 Aligned_cols=80 Identities=13% Similarity=0.029 Sum_probs=41.4
Q ss_pred HHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHH----------HHHHHHHHHHHhcC-CCCCceEEEeeccC----
Q 024250 92 IKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFY----------LDWAVHSFRITNCG-VQDTTQIHTHMCYS---- 156 (270)
Q Consensus 92 ~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~----------~~~~~~~~~~~~~~-~~~~~~i~lH~c~g---- 156 (270)
..+.++.|.++|+++|.|-=|.=-...+. +..+.. .+.+.+.++++-+. .+ +++++-+|+.
T Consensus 36 ~~~~~~~l~~~GaD~iElGiPfSDP~aDG--pvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~--~Pivlm~Y~n~v~~ 111 (271)
T 3nav_A 36 SLAIMQTLIDAGADALELGMPFSDPLADG--PTIQGANLRALAAKTTPDICFELIAQIRARNPE--TPIGLLMYANLVYA 111 (271)
T ss_dssp HHHHHHHHHHTTCSSEEEECCCCCGGGCC--SHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT--SCEEEEECHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCCCCCC--HHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCC--CCEEEEecCcHHHH
Confidence 34556778899999999887751111111 011111 11223344443322 22 4566666642
Q ss_pred -CchhHHHHHHhCCCCEEEE
Q 024250 157 -NFNDIIHSIIDMDADVITI 175 (270)
Q Consensus 157 -~~~~~~~~l~~~~vd~l~l 175 (270)
....-+..+.++++|++-+
T Consensus 112 ~g~~~f~~~~~~aGvdGvIi 131 (271)
T 3nav_A 112 RGIDDFYQRCQKAGVDSVLI 131 (271)
T ss_dssp TCHHHHHHHHHHHTCCEEEE
T ss_pred HhHHHHHHHHHHCCCCEEEE
Confidence 1223456678889998544
No 135
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=39.56 E-value=1.8e+02 Score=25.00 Aligned_cols=80 Identities=14% Similarity=0.156 Sum_probs=47.6
Q ss_pred ceEEEeeccCCchhHHHHHHhCCC---CEEEEEccCCCchhHHHhhhcccCCCeeeceEecCCCCCCCCHHHHHHHHHHH
Q 024250 147 TQIHTHMCYSNFNDIIHSIIDMDA---DVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKM 223 (270)
Q Consensus 147 ~~i~lH~c~g~~~~~~~~l~~~~v---d~l~ld~~~~~~~~l~~l~~~~~~~~~l~~GvVd~~~~~~e~~e~v~~~i~~~ 223 (270)
.+++||+- ....+.++.|.+.+. .++--=|. ++.+..+.+.+ .|-.+++|-+.-+ +.+ . .++
T Consensus 169 lPviiH~r-~A~~d~l~iL~~~~~~~~~gViH~Fs-Gs~e~a~~~l~---lG~yis~~G~~~k-----~~~----~-~~~ 233 (325)
T 3ipw_A 169 LPFFFHCR-KSWSDLCQLNKELGYNGCKGVVHCFD-GTEEEMNQILN---EGWDIGVTGNSLQ-----SIE----L-LNV 233 (325)
T ss_dssp CCEEEEEE-SCHHHHHHHHHHTTCTTSCEEECSCC-CCHHHHHHHHH---TTCEEEECSGGGS-----SHH----H-HHH
T ss_pred CeEEEEeC-chHHHHHHHHHhcCCCCCcEEEEECC-CCHHHHHHHHh---cCcEEeeCccccC-----cHH----H-HHH
Confidence 56899965 567788888877653 23332222 34444444444 2445555543111 222 1 256
Q ss_pred hccccCCceEecCCCCCC
Q 024250 224 LAVLETNILWVNPDCGLK 241 (270)
Q Consensus 224 ~~~~~~~~l~vsp~Cgl~ 241 (270)
++.+|.+++++-+||.+.
T Consensus 234 v~~iPldrlLlETDaP~l 251 (325)
T 3ipw_A 234 MKQIPIERLHIETDCPYC 251 (325)
T ss_dssp HTTSCGGGEEECCCTTSC
T ss_pred HHhCCcccEEEeCCCccc
Confidence 788899999999999764
No 136
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=39.28 E-value=40 Score=28.78 Aligned_cols=60 Identities=20% Similarity=0.343 Sum_probs=34.3
Q ss_pred HHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCc-hhHHHHHHhCCCCEE
Q 024250 95 EVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNF-NDIIHSIIDMDADVI 173 (270)
Q Consensus 95 ~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~-~~~~~~l~~~~vd~l 173 (270)
++++..++|+++|++|.+... . .. ++.+.+ .+ ..++. . - |+. .+.+..+.++++|.+
T Consensus 208 ea~eA~~aGaD~I~ld~~~~~-----------~-~k---~av~~v-~~---~ipi~-A-s-GGIt~eni~~~a~tGvD~I 265 (286)
T 1x1o_A 208 ELEEALEAGADLILLDNFPLE-----------A-LR---EAVRRV-GG---RVPLE-A-S-GNMTLERAKAAAEAGVDYV 265 (286)
T ss_dssp HHHHHHHHTCSEEEEESCCHH-----------H-HH---HHHHHH-TT---SSCEE-E-E-SSCCHHHHHHHHHHTCSEE
T ss_pred HHHHHHHcCCCEEEECCCCHH-----------H-HH---HHHHHh-CC---CCeEE-E-E-cCCCHHHHHHHHHcCCCEE
Confidence 344455679999999974322 1 12 222222 11 12221 1 2 445 367888999999999
Q ss_pred EEE
Q 024250 174 TIE 176 (270)
Q Consensus 174 ~ld 176 (270)
++=
T Consensus 266 sVg 268 (286)
T 1x1o_A 266 SVG 268 (286)
T ss_dssp ECT
T ss_pred EEc
Confidence 983
No 137
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=39.20 E-value=1.2e+02 Score=25.94 Aligned_cols=80 Identities=15% Similarity=0.081 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHH---HHH
Q 024250 90 LAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIH---SII 166 (270)
Q Consensus 90 ~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~---~l~ 166 (270)
+.++++++.+.+.|++-|.+--- -+....+ +.++ -.+.++.+.+...+.++++.|+...+..+.++ ...
T Consensus 28 ~~l~~lv~~li~~Gv~Gl~v~Gt-TGE~~~L---s~~E----r~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~ 99 (311)
T 3h5d_A 28 DAIPALIEHLLAHHTDGILLAGT-TAESPTL---THDE----ELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVA 99 (311)
T ss_dssp THHHHHHHHHHHTTCCCEEESST-TTTGGGS---CHHH----HHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECcc-ccChhhC---CHHH----HHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHH
Confidence 36667778888999986554321 0000111 1222 22333333333334467888877445555443 456
Q ss_pred hCCC-CEEEEEc
Q 024250 167 DMDA-DVITIEN 177 (270)
Q Consensus 167 ~~~v-d~l~ld~ 177 (270)
++++ |++.+=.
T Consensus 100 ~~Ga~davlv~~ 111 (311)
T 3h5d_A 100 EFGGFAAGLAIV 111 (311)
T ss_dssp HSCCCSEEEEEC
T ss_pred hcCCCcEEEEcC
Confidence 6786 9987753
No 138
>3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A*
Probab=38.97 E-value=1.2e+02 Score=28.47 Aligned_cols=74 Identities=12% Similarity=0.095 Sum_probs=43.9
Q ss_pred HHHHcCCCEEEeccCccccCCC----CCCccHHHH---HHHHHHHHHHHhcCCCCCceEEEeeccCC-------------
Q 024250 98 DLEKAGINVIQIDEAALREGLP----LRKSEHAFY---LDWAVHSFRITNCGVQDTTQIHTHMCYSN------------- 157 (270)
Q Consensus 98 ~l~~~G~~~IQiDEP~l~~~l~----~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~lH~c~g~------------- 157 (270)
-|.++|.++|.||+-......+ ..+ +++.| +....+.++. . +++++||...|.
T Consensus 42 g~~~~G~~~~~iDdgW~~~~~d~~g~~~~-~~~~fP~gl~~l~~~i~~--~----Glk~gi~~~~~~~~~~~~~p~~~~~ 114 (614)
T 3a21_A 42 GLPAAGYTYINIDEGWWQGTRDSAGNITV-DTAEWPGGMSAITAYIHS--K----GLKAGIYTDAGKDGCGYYYPTGRPA 114 (614)
T ss_dssp THHHHTCCEEECCTTSCCSCBCTTCCBCC-CTTTSTTCHHHHHHHHHH--T----TCEEEEEEESSSSCHHHHSCSSSCC
T ss_pred CHHhhCCEEEEECCCcCCCCcCCCCCEEE-CccccCCcHHHHHHHHHH--C----CCeeEEEecCCCccccccCCCCCCC
Confidence 3577899999999976642100 000 11112 2333333333 1 356778775443
Q ss_pred ---------chhHHHHHHhCCCCEEEEEcc
Q 024250 158 ---------FNDIIHSIIDMDADVITIENS 178 (270)
Q Consensus 158 ---------~~~~~~~l~~~~vd~l~ld~~ 178 (270)
+...+..+.+.+||.|-+|+.
T Consensus 115 ~pg~g~~~~~~~~~~~~~~wGvd~lK~D~~ 144 (614)
T 3a21_A 115 APGSGSEGHYDQDMLQFSTWGFDFVKVDWC 144 (614)
T ss_dssp CTTCSCTTCHHHHHHHHHHHTCSEEEEECH
T ss_pred CCchhhHHHHHHHHHHHHHcCCcEEEeccc
Confidence 334566788999999999984
No 139
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=38.79 E-value=1.8e+02 Score=27.43 Aligned_cols=27 Identities=11% Similarity=0.078 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHHHcCCCEEEecc
Q 024250 85 CYQIALAIKDEVEDLEKAGINVIQIDE 111 (270)
Q Consensus 85 ~~~l~~~~~~~~~~l~~~G~~~IQiDE 111 (270)
++++.+.+.+..+...++|++.|+|.-
T Consensus 136 i~~~i~~~~~aA~~a~~aGfd~veih~ 162 (671)
T 1ps9_A 136 ILQLIDNFARCAQLAREAGYDGVEVMG 162 (671)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEcc
Confidence 466777777778888899999999873
No 140
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=38.77 E-value=77 Score=26.95 Aligned_cols=64 Identities=11% Similarity=0.085 Sum_probs=37.5
Q ss_pred HHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCc-hhHHHHHHhCCCCEE
Q 024250 95 EVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNF-NDIIHSIIDMDADVI 173 (270)
Q Consensus 95 ~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~-~~~~~~l~~~~vd~l 173 (270)
++++..++|+++|++|-... .. ...+++.++... + .++ +-.- |+. .+.+..+.++++|.|
T Consensus 206 ea~eal~aGaD~I~LDn~~~-----------~~-~~~~v~~l~~~~---~-~v~--ieaS-GGIt~~~i~~~a~tGVD~i 266 (284)
T 1qpo_A 206 QLDAVLPEKPELILLDNFAV-----------WQ-TQTAVQRRDSRA---P-TVM--LESS-GGLSLQTAATYAETGVDYL 266 (284)
T ss_dssp HHHHHGGGCCSEEEEETCCH-----------HH-HHHHHHHHHHHC---T-TCE--EEEE-SSCCTTTHHHHHHTTCSEE
T ss_pred HHHHHHHcCCCEEEECCCCH-----------HH-HHHHHHHhhccC---C-CeE--EEEE-CCCCHHHHHHHHhcCCCEE
Confidence 55566668999999997321 11 233344444321 1 122 2223 545 357788999999999
Q ss_pred EEEc
Q 024250 174 TIEN 177 (270)
Q Consensus 174 ~ld~ 177 (270)
++=.
T Consensus 267 svG~ 270 (284)
T 1qpo_A 267 AVGA 270 (284)
T ss_dssp ECGG
T ss_pred EECH
Confidence 9654
No 141
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=37.31 E-value=1.8e+02 Score=24.35 Aligned_cols=73 Identities=23% Similarity=0.301 Sum_probs=40.5
Q ss_pred hHHHHHHhCC-CCEEEEEccCCCchhHHHhhhc-ccCCCeeeceEecCCCCCCCCHHHHHHHHHHHhccccCC--ceEec
Q 024250 160 DIIHSIIDMD-ADVITIENSRSDEKLLSVFREG-VKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETN--ILWVN 235 (270)
Q Consensus 160 ~~~~~l~~~~-vd~l~ld~~~~~~~~l~~l~~~-~~~~~~l~~GvVd~~~~~~e~~e~v~~~i~~~~~~~~~~--~l~vs 235 (270)
+.+...++++ +|.+.+|+... .+.++.+.+. -..+.++.+=.=|-.. ..+.+++..+++++.+ +|.+ ++.++
T Consensus 123 ~ll~~~l~~g~~dyIDvEl~~~-~~~~~~l~~~a~~~~~kvI~S~Hdf~~--tP~~~el~~~~~~~~~-~GaDIvKia~~ 198 (276)
T 3o1n_A 123 DLNRAAVDSGLVDMIDLELFTG-DDEVKATVGYAHQHNVAVIMSNHDFHK--TPAAEEIVQRLRKMQE-LGADIPKIAVM 198 (276)
T ss_dssp HHHHHHHHHTCCSEEEEEGGGC-HHHHHHHHHHHHHTTCEEEEEEEESSC--CCCHHHHHHHHHHHHH-TTCSEEEEEEC
T ss_pred HHHHHHHhcCCCCEEEEECcCC-HHHHHHHHHHHHhCCCEEEEEeecCCC--CcCHHHHHHHHHHHHH-cCCCEEEEEec
Confidence 4666678888 99999999763 3333333220 0123334222222222 2357889999998854 4544 34555
Q ss_pred C
Q 024250 236 P 236 (270)
Q Consensus 236 p 236 (270)
|
T Consensus 199 a 199 (276)
T 3o1n_A 199 P 199 (276)
T ss_dssp C
T ss_pred C
Confidence 4
No 142
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=37.19 E-value=46 Score=28.43 Aligned_cols=64 Identities=11% Similarity=0.111 Sum_probs=35.7
Q ss_pred HHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCc-hhHHHHHHhCCCCEE
Q 024250 95 EVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNF-NDIIHSIIDMDADVI 173 (270)
Q Consensus 95 ~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~-~~~~~~l~~~~vd~l 173 (270)
++++..++|+++|++|.... + ....+++.++..... .++ -.- |+. .+.+..+.++++|.+
T Consensus 205 ea~eA~~aGaD~I~LDn~~~-----------e-~l~~av~~l~~~~~~----v~i--eAS-GGIt~eni~~~a~tGVD~I 265 (285)
T 1o4u_A 205 DALRAVEAGADIVMLDNLSP-----------E-EVKDISRRIKDINPN----VIV--EVS-GGITEENVSLYDFETVDVI 265 (285)
T ss_dssp HHHHHHHTTCSEEEEESCCH-----------H-HHHHHHHHHHHHCTT----SEE--EEE-ECCCTTTGGGGCCTTCCEE
T ss_pred HHHHHHHcCCCEEEECCCCH-----------H-HHHHHHHHhhccCCC----ceE--EEE-CCCCHHHHHHHHHcCCCEE
Confidence 45555668999999997321 1 123344444332111 222 122 444 245677889999999
Q ss_pred EEEc
Q 024250 174 TIEN 177 (270)
Q Consensus 174 ~ld~ 177 (270)
++=.
T Consensus 266 svGs 269 (285)
T 1o4u_A 266 SSSR 269 (285)
T ss_dssp EEGG
T ss_pred EEeH
Confidence 9765
No 143
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=37.14 E-value=2.3e+02 Score=26.43 Aligned_cols=76 Identities=17% Similarity=0.132 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEee--ccCCchhHHHHHHhC
Q 024250 91 AIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHM--CYSNFNDIIHSIIDM 168 (270)
Q Consensus 91 ~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~--c~g~~~~~~~~l~~~ 168 (270)
.+.+.++++.++|+++|.|-+..=.. .|....+. +..+++.+. .+.++.+|+ -+|---...-...++
T Consensus 176 ~~~~~a~~l~~~Gad~I~L~DT~G~~-------~P~~v~~l-v~~l~~~~p---~~i~I~~H~Hnd~GlAvAN~laAveA 244 (539)
T 1rqb_A 176 GYVKLAGQLLDMGADSIALKDMAALL-------KPQPAYDI-IKAIKDTYG---QKTQINLHCHSTTGVTEVSLMKAIEA 244 (539)
T ss_dssp HHHHHHHHHHHTTCSEEEEEETTCCC-------CHHHHHHH-HHHHHHHHC---TTCCEEEEEBCTTSCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCEEEeCCCCCCc-------CHHHHHHH-HHHHHHhcC---CCceEEEEeCCCCChHHHHHHHHHHh
Confidence 44455666778899988887743221 23333332 333333332 123456664 334332333345778
Q ss_pred CCCEEEEEc
Q 024250 169 DADVITIEN 177 (270)
Q Consensus 169 ~vd~l~ld~ 177 (270)
+++.+..=.
T Consensus 245 Ga~~VD~ti 253 (539)
T 1rqb_A 245 GVDVVDTAI 253 (539)
T ss_dssp TCSEEEEBC
T ss_pred CCCEEEEec
Confidence 888775443
No 144
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=36.97 E-value=1.9e+02 Score=24.51 Aligned_cols=123 Identities=12% Similarity=0.043 Sum_probs=68.1
Q ss_pred HHHHHHHHHHcCCCE-EEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHHHHHhCCC
Q 024250 92 IKDEVEDLEKAGINV-IQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDA 170 (270)
Q Consensus 92 ~~~~~~~l~~~G~~~-IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~~l~~~~v 170 (270)
++..+++..+.+..+ ||+.+-.+.... .. +......+.+.+.....+++.||.=-|..-+.+....++++
T Consensus 34 ~~avi~AAee~~sPvIlq~s~~~~~~~~-----g~----~~~~~~v~~~A~~~~~~VPValHlDHg~~~e~i~~ai~~GF 104 (288)
T 3q94_A 34 TQAILAAAEEEKSPVILGVSEGAARHMT-----GF----KTVVAMVKALIEEMNITVPVAIHLDHGSSFEKCKEAIDAGF 104 (288)
T ss_dssp HHHHHHHHHHTTCCEEEEEEHHHHHHTS-----CH----HHHHHHHHHHHHHTTCCSCEEEEEEEECSHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhCCCEEEECChhhhhhcC-----CH----HHHHHHHHHHHHhcCCCCcEEEECCCCCCHHHHHHHHHcCC
Confidence 334455556667775 899865443211 11 22233334444411123678899855543355667788999
Q ss_pred CEEEEEccCCCc-hhHHHhhhcc----cCCC--eeeceEecCCC-------CCCCCHHHHHHHHHHH
Q 024250 171 DVITIENSRSDE-KLLSVFREGV----KYGA--GIGPGVYDIHS-------PRIPSTEEIADRINKM 223 (270)
Q Consensus 171 d~l~ld~~~~~~-~~l~~l~~~~----~~~~--~l~~GvVd~~~-------~~~e~~e~v~~~i~~~ 223 (270)
+.+-+|-+..+. ++++.-++.+ ..|- ..=+|.|-+.. ....+|+++.+-+++.
T Consensus 105 tSVMiDgS~~p~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgG~Ed~~~~~~~~yT~Peea~~Fv~~T 171 (288)
T 3q94_A 105 TSVMIDASHHPFEENVETTKKVVEYAHARNVSVEAELGTVGGQEDDVIAEGVIYADPAECKHLVEAT 171 (288)
T ss_dssp SEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEEEEESBCBCSCSSCGGGGCBCCCHHHHHHHHHHH
T ss_pred CeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcCCccccCCCHHHHHHHHHHH
Confidence 999999877443 4554433311 1122 12355554331 2468999998877653
No 145
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=35.88 E-value=80 Score=27.08 Aligned_cols=78 Identities=19% Similarity=0.117 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHH---HHH
Q 024250 90 LAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIH---SII 166 (270)
Q Consensus 90 ~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~---~l~ 166 (270)
+.++++++.+.+.|++-|.+-=- -+....+ +.++..+ .++.+.+...++++++.++. .+..+.++ ...
T Consensus 33 ~~l~~lv~~li~~Gv~Gl~v~Gt-TGE~~~L---s~eEr~~----v~~~~v~~~~grvpViaGvg-~~t~~ai~la~~A~ 103 (316)
T 3e96_A 33 HHYKETVDRIVDNGIDVIVPCGN-TSEFYAL---SLEEAKE----EVRRTVEYVHGRALVVAGIG-YATSTAIELGNAAK 103 (316)
T ss_dssp HHHHHHHHHHHTTTCCEECTTSG-GGTGGGS---CHHHHHH----HHHHHHHHHTTSSEEEEEEC-SSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEeCcc-ccCcccC---CHHHHHH----HHHHHHHHhCCCCcEEEEeC-cCHHHHHHHHHHHH
Confidence 46777788888999987554310 0000101 1222222 22222222223467888886 46655443 456
Q ss_pred hCCCCEEEEE
Q 024250 167 DMDADVITIE 176 (270)
Q Consensus 167 ~~~vd~l~ld 176 (270)
++++|++.+=
T Consensus 104 ~~Gadavlv~ 113 (316)
T 3e96_A 104 AAGADAVMIH 113 (316)
T ss_dssp HHTCSEEEEC
T ss_pred hcCCCEEEEc
Confidence 7899998873
No 146
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=35.72 E-value=1.3e+02 Score=26.04 Aligned_cols=117 Identities=10% Similarity=-0.012 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeec--cCCchhHHHHHHhC
Q 024250 91 AIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMC--YSNFNDIIHSIIDM 168 (270)
Q Consensus 91 ~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c--~g~~~~~~~~l~~~ 168 (270)
.+.+.++++.++|++.|.|-+-.=.. .|....+ .++.+.+.++ +.++.+|+= +|---.+.-...+.
T Consensus 170 ~~~~~~~~~~~~Ga~~i~l~DT~G~~-------~P~~v~~----lv~~l~~~~p-~~~i~~H~Hnd~GlA~AN~laAv~a 237 (337)
T 3ble_A 170 YVKSLVEHLSKEHIERIFLPDTLGVL-------SPEETFQ----GVDSLIQKYP-DIHFEFHGHNDYDLSVANSLQAIRA 237 (337)
T ss_dssp HHHHHHHHHHTSCCSEEEEECTTCCC-------CHHHHHH----HHHHHHHHCT-TSCEEEECBCTTSCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCEEEEecCCCCc-------CHHHHHH----HHHHHHHhcC-CCeEEEEecCCcchHHHHHHHHHHh
Confidence 44555677778899888887753221 2333222 3333333332 245666642 23222233344678
Q ss_pred CCCEEEEEccC-----CCchhHHHhhhcccCCCeeeceEecCCCCCCCCHHHHHHHHHHHhcc
Q 024250 169 DADVITIENSR-----SDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAV 226 (270)
Q Consensus 169 ~vd~l~ld~~~-----~~~~~l~~l~~~~~~~~~l~~GvVd~~~~~~e~~e~v~~~i~~~~~~ 226 (270)
+++.+..=... ++. .++.+...+. . . .|+ ++ ....+...++.+.+.+....
T Consensus 238 Ga~~vd~tv~GlG~~aGN~-~~E~lv~~L~-~-~--~g~-~t-gidl~~L~~~~~~v~~~~~~ 293 (337)
T 3ble_A 238 GVKGLHASINGLGERAGNT-PLEALVTTIH-D-K--SNS-KT-NINEIAITEASRLVEVFSGK 293 (337)
T ss_dssp TCSEEEEBGGGCSSTTCBC-BHHHHHHHHH-H-H--SSC-CC-CCCGGGHHHHHHHHHHHHCC
T ss_pred CCCEEEEecccccccccch-hHHHHHHHHH-H-h--cCC-CC-CcCHHHHHHHHHHHHHHHCC
Confidence 88877655422 111 2232221100 0 0 132 21 23456777787888777654
No 147
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=35.68 E-value=2.2e+02 Score=25.02 Aligned_cols=27 Identities=19% Similarity=0.227 Sum_probs=21.7
Q ss_pred HH-HHHHHHHHHHHHHH-HcCCCEEEecc
Q 024250 85 CY-QIALAIKDEVEDLE-KAGINVIQIDE 111 (270)
Q Consensus 85 ~~-~l~~~~~~~~~~l~-~~G~~~IQiDE 111 (270)
++ .+.+.+.+.++.+. ++|++.|+|+-
T Consensus 168 I~~~~i~~f~~AA~~a~~~aGfDgVEih~ 196 (379)
T 3aty_A 168 VRDGIIPLFVEGAKNAIFKAGFDGVEIHG 196 (379)
T ss_dssp HHHTHHHHHHHHHHHHHHTSCCSEEEEEE
T ss_pred HhHHHHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 35 67777777788888 89999999874
No 148
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=35.39 E-value=1.2e+02 Score=25.31 Aligned_cols=72 Identities=13% Similarity=0.018 Sum_probs=38.4
Q ss_pred HHHHHHHHcCCCEEEeccCccccC--CCC--CCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHHHHHhCC
Q 024250 94 DEVEDLEKAGINVIQIDEAALREG--LPL--RKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMD 169 (270)
Q Consensus 94 ~~~~~l~~~G~~~IQiDEP~l~~~--l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~~l~~~~ 169 (270)
+.++++.++|+++||+-|+..... ... .... .+.++++.+..+ .++.+-...++ .+.++.+.+++
T Consensus 32 ~~a~~~~~~Ga~~i~~~e~v~~~~~~~~G~~~~~~--------~~~i~~i~~~~~--~Pvi~~~~~~~-~~~~~~~~~aG 100 (297)
T 2zbt_A 32 EQAVIAEEAGAVAVMALERVPADIRAQGGVARMSD--------PKIIKEIMAAVS--IPVMAKVRIGH-FVEAMILEAIG 100 (297)
T ss_dssp HHHHHHHHHTCSEEEECSSCHHHHHHTTCCCCCCC--------HHHHHHHHTTCS--SCEEEEEETTC-HHHHHHHHHTT
T ss_pred HHHHHHHHCCCcEEEeccccchHHHhhcCCccCCC--------HHHHHHHHHhcC--CCeEEEeccCC-HHHHHHHHHCC
Confidence 345667788999999966422110 000 0001 123444444332 34444333343 45678889999
Q ss_pred CCEEEEE
Q 024250 170 ADVITIE 176 (270)
Q Consensus 170 vd~l~ld 176 (270)
+|+++.-
T Consensus 101 ad~v~~~ 107 (297)
T 2zbt_A 101 VDFIDES 107 (297)
T ss_dssp CSEEEEE
T ss_pred CCEEeee
Confidence 9999443
No 149
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=35.36 E-value=1.7e+02 Score=24.93 Aligned_cols=78 Identities=10% Similarity=0.103 Sum_probs=38.6
Q ss_pred HHHHHHHHHcCCCEEEeccCccccCC-CCCC-ccH---HHHHHHHHHHHHHHhcCCCCCceEEEeeccC-Cc---hhHHH
Q 024250 93 KDEVEDLEKAGINVIQIDEAALREGL-PLRK-SEH---AFYLDWAVHSFRITNCGVQDTTQIHTHMCYS-NF---NDIIH 163 (270)
Q Consensus 93 ~~~~~~l~~~G~~~IQiDEP~l~~~l-~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g-~~---~~~~~ 163 (270)
.++.+++.++|+++|.+.-|.-...+ .... ... .++.+...++.+++ ..++. -.|.| .. .++..
T Consensus 173 ~eeA~amA~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~v----npdvi---vLc~gGpIstpeDv~~ 245 (286)
T 2p10_A 173 PEDAVAMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTI----RDDII---ILSHGGPIANPEDARF 245 (286)
T ss_dssp HHHHHHHHHHTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHH----CSCCE---EEEESTTCCSHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHh----CCCcE---EEecCCCCCCHHHHHH
Confidence 34678889999999988877332221 1110 011 22344444444443 22232 24655 33 34444
Q ss_pred HHHhC-CCCEEEEEc
Q 024250 164 SIIDM-DADVITIEN 177 (270)
Q Consensus 164 ~l~~~-~vd~l~ld~ 177 (270)
.+..+ +++++..-.
T Consensus 246 ~l~~t~G~~G~~gAS 260 (286)
T 2p10_A 246 ILDSCQGCHGFYGAS 260 (286)
T ss_dssp HHHHCTTCCEEEESH
T ss_pred HHhcCCCccEEEeeh
Confidence 44334 488888765
No 150
>2d16_A Hypothetical protein PH1918; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.65A {Pyrococcus horikoshii}
Probab=35.16 E-value=28 Score=26.85 Aligned_cols=26 Identities=23% Similarity=0.262 Sum_probs=21.2
Q ss_pred CeeeceEecCCCC-CCCCHHHHHHHHH
Q 024250 196 AGIGPGVYDIHSP-RIPSTEEIADRIN 221 (270)
Q Consensus 196 ~~l~~GvVd~~~~-~~e~~e~v~~~i~ 221 (270)
++=.+||||+.++ -+|+.+++.+|=+
T Consensus 126 GrgvlGVvDG~~p~GVE~e~d~~~Rk~ 152 (162)
T 2d16_A 126 GRAVIGVVDGKAANKIETDEQKKERRE 152 (162)
T ss_dssp CEEEEEEEESSCCCSCCCHHHHHHHHH
T ss_pred CcEEEEEecCCCCCCccCHHHHHHHHH
Confidence 4678999999877 5999999887743
No 151
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=34.97 E-value=45 Score=22.23 Aligned_cols=23 Identities=26% Similarity=0.421 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHcCCCEEEec
Q 024250 88 IALAIKDEVEDLEKAGINVIQID 110 (270)
Q Consensus 88 l~~~~~~~~~~l~~~G~~~IQiD 110 (270)
|-.++.+.-++|+++|++.+||.
T Consensus 31 leralqelekalaragarnvqit 53 (96)
T 2jvf_A 31 LERALQELEKALARAGARNVQIT 53 (96)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHHHHHhccccceEEE
Confidence 34566667788899999999986
No 152
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=34.83 E-value=1.7e+02 Score=24.12 Aligned_cols=22 Identities=14% Similarity=0.232 Sum_probs=18.3
Q ss_pred HHHHHHHHHcCCCEEEeccCcc
Q 024250 93 KDEVEDLEKAGINVIQIDEAAL 114 (270)
Q Consensus 93 ~~~~~~l~~~G~~~IQiDEP~l 114 (270)
.+.++.|.++|+++|.++=|.-
T Consensus 34 ~~~~~~l~~~GaD~ieig~P~s 55 (268)
T 1qop_A 34 LKIIDTLIDAGADALELGVPFS 55 (268)
T ss_dssp HHHHHHHHHTTCSSEEEECCCS
T ss_pred HHHHHHHHHCCCCEEEECCCCC
Confidence 4567888899999999998873
No 153
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=34.78 E-value=2.2e+02 Score=24.51 Aligned_cols=147 Identities=11% Similarity=0.177 Sum_probs=81.1
Q ss_pred HHHHHHHHHHcCCCEEEec----cCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeec--cCCchhHHHHH
Q 024250 92 IKDEVEDLEKAGINVIQID----EAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMC--YSNFNDIIHSI 165 (270)
Q Consensus 92 ~~~~~~~l~~~G~~~IQiD----EP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c--~g~~~~~~~~l 165 (270)
..+.++.|.++|++.|.+= =|.-+........+. .+.++.+.+.++ ..++.+.++ +++ ..-++..
T Consensus 32 k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~-------~e~l~~i~~~~~-~~~i~~l~~p~~~~-~~~i~~a 102 (345)
T 1nvm_A 32 VRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTD-------LEYIEAVAGEIS-HAQIATLLLPGIGS-VHDLKNA 102 (345)
T ss_dssp HHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCH-------HHHHHHHHTTCS-SSEEEEEECBTTBC-HHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCH-------HHHHHHHHhhCC-CCEEEEEecCCccc-HHHHHHH
Confidence 3445667778999999993 232221110111121 123444434343 244444422 233 3456778
Q ss_pred HhCCCCEEEEEccCCCchh----HHHhhhcccCCCeeeceEecCCCCCCCCHHHHHHHHHHHhccccCCceEecCCCCCC
Q 024250 166 IDMDADVITIENSRSDEKL----LSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLK 241 (270)
Q Consensus 166 ~~~~vd~l~ld~~~~~~~~----l~~l~~~~~~~~~l~~GvVd~~~~~~e~~e~v~~~i~~~~~~~~~~~l~vsp~Cgl~ 241 (270)
.++++|.+.+-...++.+. .+..++ .+..+...+-|+. ..+++.+.+..+.+.+. |.+.+.+.-.-|..
T Consensus 103 ~~aGvd~v~I~~~~s~~~~~~~~i~~ak~---~G~~v~~~~~~a~---~~~~e~~~~ia~~~~~~-Ga~~i~l~DT~G~~ 175 (345)
T 1nvm_A 103 YQAGARVVRVATHCTEADVSKQHIEYARN---LGMDTVGFLMMSH---MIPAEKLAEQGKLMESY-GATCIYMADSGGAM 175 (345)
T ss_dssp HHHTCCEEEEEEETTCGGGGHHHHHHHHH---HTCEEEEEEESTT---SSCHHHHHHHHHHHHHH-TCSEEEEECTTCCC
T ss_pred HhCCcCEEEEEEeccHHHHHHHHHHHHHH---CCCEEEEEEEeCC---CCCHHHHHHHHHHHHHC-CCCEEEECCCcCcc
Confidence 8899999998764433222 233333 2556666665553 45778888777777654 66788777776665
Q ss_pred CCCHhHHHHHHHHHH
Q 024250 242 TRKYTEVKPALSNMV 256 (270)
Q Consensus 242 ~~~~~~a~~kL~~l~ 256 (270)
+|....+-++.+.
T Consensus 176 --~P~~v~~lv~~l~ 188 (345)
T 1nvm_A 176 --SMNDIRDRMRAFK 188 (345)
T ss_dssp --CHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHH
Confidence 4765555555544
No 154
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=34.57 E-value=78 Score=29.68 Aligned_cols=69 Identities=13% Similarity=0.166 Sum_probs=47.3
Q ss_pred chhHHHHHHhCCCCEEEEEccCCCc----hhHHHhhhcccCCCeeeceEecCCCCCCCCHHHHHHHHHHHhccccCCceE
Q 024250 158 FNDIIHSIIDMDADVITIENSRSDE----KLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILW 233 (270)
Q Consensus 158 ~~~~~~~l~~~~vd~l~ld~~~~~~----~~l~~l~~~~~~~~~l~~GvVd~~~~~~e~~e~v~~~i~~~~~~~~~~~l~ 233 (270)
..+..+.|.+.++|.|.+|.++++. +.++.+++.. .+..|..|+| .|.+...+.++...+.+ ++.
T Consensus 282 ~~eR~~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~~~-p~~~viaGNV-------aT~e~a~~Li~aGAD~v---kVG 350 (556)
T 4af0_A 282 DKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTY-PKIDVIAGNV-------VTREQAAQLIAAGADGL---RIG 350 (556)
T ss_dssp HHHHHHHHHHTTCCEEEECCSCCCSHHHHHHHHHHHHHC-TTSEEEEEEE-------CSHHHHHHHHHHTCSEE---EEC
T ss_pred HHHHHHHHHhcCCcEEEEeccccccHHHHHHHHHHHhhC-CcceEEeccc-------cCHHHHHHHHHcCCCEE---eec
Confidence 3467889999999999999988643 3344455431 2567899985 56777888777766654 344
Q ss_pred ecCC
Q 024250 234 VNPD 237 (270)
Q Consensus 234 vsp~ 237 (270)
+.|+
T Consensus 351 iGpG 354 (556)
T 4af0_A 351 MGSG 354 (556)
T ss_dssp SSCS
T ss_pred CCCC
Confidence 5555
No 155
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=34.39 E-value=1.9e+02 Score=23.64 Aligned_cols=64 Identities=16% Similarity=0.153 Sum_probs=37.9
Q ss_pred HHHHhCCCCEEEEEccCCCchhHHHhhhcccCCCeeeceEecCCCCCCCCHHHHHHHHHHHhccccCCceEe
Q 024250 163 HSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWV 234 (270)
Q Consensus 163 ~~l~~~~vd~l~ld~~~~~~~~l~~l~~~~~~~~~l~~GvVd~~~~~~e~~e~v~~~i~~~~~~~~~~~l~v 234 (270)
....++++|.+.+.+.. +.+.++.+.+. +.+.+|-...+..++.++..+.+.++.+ .|.+-+.+
T Consensus 173 ~~a~~~Gad~i~~~~~~-~~~~l~~i~~~------~~ipvva~GGi~~~~~~~~~~~~~~~~~-~Ga~gv~v 236 (273)
T 2qjg_A 173 RLGAELGADIVKTSYTG-DIDSFRDVVKG------CPAPVVVAGGPKTNTDEEFLQMIKDAME-AGAAGVAV 236 (273)
T ss_dssp HHHHHTTCSEEEECCCS-SHHHHHHHHHH------CSSCEEEECCSCCSSHHHHHHHHHHHHH-HTCSEEEC
T ss_pred HHHHHcCCCEEEECCCC-CHHHHHHHHHh------CCCCEEEEeCCCCCCHHHHHHHHHHHHH-cCCcEEEe
Confidence 55678999999988642 45555555542 1223333333334568888777777764 35555544
No 156
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=34.26 E-value=61 Score=27.62 Aligned_cols=78 Identities=14% Similarity=0.018 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCch---hHHHHHH
Q 024250 90 LAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFN---DIIHSII 166 (270)
Q Consensus 90 ~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~---~~~~~l~ 166 (270)
+.++++++.+.+.|++-|.+ +..+.+.+..-.++-.+.++.+.+...+.++++.++...+.. +......
T Consensus 25 ~~l~~lv~~li~~Gv~gl~v--------~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~ 96 (300)
T 3eb2_A 25 DVMGRLCDDLIQAGVHGLTP--------LGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYE 96 (300)
T ss_dssp HHHHHHHHHHHHTTCSCBBT--------TSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEESSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEE--------CccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHH
Q ss_pred hCCCCEEEE
Q 024250 167 DMDADVITI 175 (270)
Q Consensus 167 ~~~vd~l~l 175 (270)
++++|++.+
T Consensus 97 ~~Gadavlv 105 (300)
T 3eb2_A 97 KLGADGILA 105 (300)
T ss_dssp HHTCSEEEE
T ss_pred HcCCCEEEE
No 157
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=34.10 E-value=1.1e+02 Score=25.69 Aligned_cols=83 Identities=8% Similarity=0.076 Sum_probs=46.6
Q ss_pred ceEEEeeccCCchhHHHHHHhCCCC---EEEEEccCCCchhHHHhhhcccCCCeeeceEecCCCCCCCCHHHHHHHHHHH
Q 024250 147 TQIHTHMCYSNFNDIIHSIIDMDAD---VITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKM 223 (270)
Q Consensus 147 ~~i~lH~c~g~~~~~~~~l~~~~vd---~l~ld~~~~~~~~l~~l~~~~~~~~~l~~GvVd~~~~~~e~~e~v~~~i~~~ 223 (270)
.++.+|+- ....+.++.|.+.+.+ ++---| .++.+.++.+.+ .|-.+++| +.-....+ .+.++++
T Consensus 128 lPv~iH~r-~a~~~~l~il~~~~~~~~~~V~H~f-sG~~e~a~~~l~---~G~yis~~---g~i~~~k~----~~~l~~~ 195 (287)
T 3rcm_A 128 LPVFLHER-DASERLLAILKDYRDHLTGAVVHCF-TGEREALFAYLD---LDLHIGIT---GWICDERR----GTHLHPL 195 (287)
T ss_dssp CCEEEEEE-SCHHHHHHHHHTTGGGCSCEEECSC-CCCHHHHHHHHH---TTCEEEEC---GGGGCTTT----CGGGHHH
T ss_pred CCEEEEcC-CcHHHHHHHHHHcCCCCCeEEEEeC-CCCHHHHHHHHH---CCcEEEEC---chhccccC----HHHHHHH
Confidence 56899965 5567788888776543 332122 224444444433 24444444 21111001 1234566
Q ss_pred hccccCCceEecCCCCCC
Q 024250 224 LAVLETNILWVNPDCGLK 241 (270)
Q Consensus 224 ~~~~~~~~l~vsp~Cgl~ 241 (270)
++.+|.+++++.+||...
T Consensus 196 v~~ip~drlLlETD~P~l 213 (287)
T 3rcm_A 196 VGNIPEGRLMLESDAPYL 213 (287)
T ss_dssp HTTSCTTSEEECCCTTSC
T ss_pred HHhcCCccEEEeccCCcc
Confidence 777899999999999764
No 158
>1nfp_A LUXF gene product; flavin mononucleotide, myristate, flavoprotein; HET: FMN MYR; 1.60A {Photobacterium leiognathi} SCOP: c.1.16.2
Probab=33.27 E-value=53 Score=26.30 Aligned_cols=45 Identities=4% Similarity=-0.094 Sum_probs=31.1
Q ss_pred CCCHHHHHH-HHHHHhccccCCceEecCCCCCCCCCHhHHHHHHHHHHH
Q 024250 210 IPSTEEIAD-RINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVA 257 (270)
Q Consensus 210 ~e~~e~v~~-~i~~~~~~~~~~~l~vsp~Cgl~~~~~~~a~~kL~~l~~ 257 (270)
++||++|++ +|++..+..|.+.+++....+ .+.+...+-|+.+.+
T Consensus 171 vGtpe~v~~~~l~~~~~~~G~de~~~~~~~~---~~~~~~~~s~el~a~ 216 (228)
T 1nfp_A 171 AGNFDTCLHHVAEMAQGLNNKVDFLFCFESM---KDQENKKSLMINFDK 216 (228)
T ss_dssp EECHHHHHHHHHHHHHHTTTCEEEEEECTTC---CCHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHHHhCCCEEEEEeCCC---CCHHHHHHHHHHHHH
Confidence 579999999 999988888889988865322 245533444555443
No 159
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=32.76 E-value=2.3e+02 Score=24.11 Aligned_cols=71 Identities=11% Similarity=0.101 Sum_probs=42.1
Q ss_pred hhHHHHHHhCCCCEEEEEccCCCch-------------hHHHhhhcccCCCeeeceEecCCCCCCCCHHHHHHHHHHHhc
Q 024250 159 NDIIHSIIDMDADVITIENSRSDEK-------------LLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLA 225 (270)
Q Consensus 159 ~~~~~~l~~~~vd~l~ld~~~~~~~-------------~l~~l~~~~~~~~~l~~GvVd~~~~~~e~~e~v~~~i~~~~~ 225 (270)
.+.+..|.+++++.+++-....+.+ .++.++..-..|-.+..|++-+. .++.+++.+.++.+.+
T Consensus 152 ~e~l~~L~~aG~~~i~i~lEt~~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Gl---get~e~~~~~l~~l~~ 228 (350)
T 3t7v_A 152 NATLLKAREKGANFLALYQETYDTELYRKLRVGQSFDGRVNARRFAKQQGYCVEDGILTGV---GNDIESTILSLRGMST 228 (350)
T ss_dssp HHHHHHHHHTTEEEEECCCBCSCHHHHHHHSTTCCHHHHHHHHHHHHHHTCEEEEEEEESS---SCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEeeecCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCeEccceEeec---CCCHHHHHHHHHHHHh
Confidence 4678899999999888644322211 12222111012445777777765 4888888888887654
Q ss_pred cccCCceE
Q 024250 226 VLETNILW 233 (270)
Q Consensus 226 ~~~~~~l~ 233 (270)
++.+.+.
T Consensus 229 -l~~~~v~ 235 (350)
T 3t7v_A 229 -NDPDMVR 235 (350)
T ss_dssp -TCCSEEE
T ss_pred -CCCCEEE
Confidence 4444443
No 160
>1vgg_A Conserved hypothetical protein TT1634; thermus thermophilus HB8, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.75A {Thermus thermophilus} SCOP: d.256.1.1
Probab=32.66 E-value=27 Score=26.92 Aligned_cols=26 Identities=27% Similarity=0.270 Sum_probs=21.0
Q ss_pred CeeeceEecCCCC-CCCCHHHHHHHHH
Q 024250 196 AGIGPGVYDIHSP-RIPSTEEIADRIN 221 (270)
Q Consensus 196 ~~l~~GvVd~~~~-~~e~~e~v~~~i~ 221 (270)
++=.+||||+.++ -+|+.+++.+|=+
T Consensus 126 GrgvlGVvDG~~p~GVE~e~d~~~Rk~ 152 (161)
T 1vgg_A 126 QRAILGVMDGFTPLGVEDEAEVAWRKD 152 (161)
T ss_dssp EEEEEEEEESCCCCEECCHHHHHHHHH
T ss_pred CcEEEEEecCCCCCCccCHHHHHHHHH
Confidence 4678999999887 4899998887733
No 161
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=32.49 E-value=99 Score=24.95 Aligned_cols=117 Identities=11% Similarity=0.121 Sum_probs=60.0
Q ss_pred HHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCch--hHHHHHHhCCCCEE
Q 024250 96 VEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFN--DIIHSIIDMDADVI 173 (270)
Q Consensus 96 ~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~--~~~~~l~~~~vd~l 173 (270)
++.+.++|+++|++-|+...... .... .+.++++. ..+ .++++ . |.++ +-...++++++|++
T Consensus 36 a~~~~~~Gad~i~v~d~~~~~~~--~~~~--------~~~i~~i~-~~~--ipvi~--~-Ggi~~~~~~~~~~~~Gad~V 99 (241)
T 1qo2_A 36 VEKLIEEGFTLIHVVDLSNAIEN--SGEN--------LPVLEKLS-EFA--EHIQI--G-GGIRSLDYAEKLRKLGYRRQ 99 (241)
T ss_dssp HHHHHHTTCCCEEEEEHHHHHHC--CCTT--------HHHHHHGG-GGG--GGEEE--E-SSCCSHHHHHHHHHTTCCEE
T ss_pred HHHHHHcCCCEEEEecccccccC--Cchh--------HHHHHHHH-hcC--CcEEE--E-CCCCCHHHHHHHHHCCCCEE
Confidence 44556789999999887553211 1111 22344433 222 34433 2 3332 33566788999999
Q ss_pred EEEccC-CCchhHHHhhhcccCCCeeeceEecCC------CCCCC----CHHHHHHHHHHHhccccCCceEecC
Q 024250 174 TIENSR-SDEKLLSVFREGVKYGAGIGPGVYDIH------SPRIP----STEEIADRINKMLAVLETNILWVNP 236 (270)
Q Consensus 174 ~ld~~~-~~~~~l~~l~~~~~~~~~l~~GvVd~~------~~~~e----~~e~v~~~i~~~~~~~~~~~l~vsp 236 (270)
.+-... .+.+.+..+... +..+.+|+ |.+ .-|.+ ++.+...++.+ .+.+.+++++
T Consensus 100 ~lg~~~l~~p~~~~~~~~~---g~~i~~~~-d~~~~~v~~~g~~~~~~~~~~e~~~~~~~----~G~~~i~~t~ 165 (241)
T 1qo2_A 100 IVSSKVLEDPSFLKSLREI---DVEPVFSL-DTRGGRVAFKGWLAEEEIDPVSLLKRLKE----YGLEEIVHTE 165 (241)
T ss_dssp EECHHHHHCTTHHHHHHTT---TCEEEEEE-EEETTEECCTTCSSCSCCCHHHHHHHHHT----TTCCEEEEEE
T ss_pred EECchHhhChHHHHHHHHc---CCcEEEEE-EecCCEEEECCceecCCCCHHHHHHHHHh----CCCCEEEEEe
Confidence 987632 233434455322 34555654 332 12332 55555444433 4556677654
No 162
>2ekm_A Hypothetical protein ST1511; NPPSFA, national project on protein ST and functional analyses, riken structural genomics/proteomi initiative; 2.06A {Sulfolobus tokodaii}
Probab=32.35 E-value=28 Score=26.90 Aligned_cols=26 Identities=27% Similarity=0.277 Sum_probs=21.1
Q ss_pred CeeeceEecCCCC-CCCCHHHHHHHHH
Q 024250 196 AGIGPGVYDIHSP-RIPSTEEIADRIN 221 (270)
Q Consensus 196 ~~l~~GvVd~~~~-~~e~~e~v~~~i~ 221 (270)
++=.+||||+.++ -+|+.+++.+|=+
T Consensus 127 GrgvlGVvDG~~p~GVE~e~d~~~Rk~ 153 (162)
T 2ekm_A 127 GRGVIGVVDGYTPLGIETEADIKERKE 153 (162)
T ss_dssp CEEEEEEEESCCCCEECCHHHHHHHHH
T ss_pred CcEEEEEecCCCCCCccCHHHHHHHHH
Confidence 4678999999887 4899999887743
No 163
>1wvq_A Hypothetical protein PAE2307; phosphorylated histidine, structural genomics, unknown funct; HET: NEP; 1.45A {Pyrobaculum aerophilum} PDB: 2gl0_A* 2jb7_A*
Probab=31.47 E-value=29 Score=26.92 Aligned_cols=27 Identities=26% Similarity=0.261 Sum_probs=21.4
Q ss_pred CeeeceEecCCCC-CCCCHHHHHHHHHH
Q 024250 196 AGIGPGVYDIHSP-RIPSTEEIADRINK 222 (270)
Q Consensus 196 ~~l~~GvVd~~~~-~~e~~e~v~~~i~~ 222 (270)
++=.+||||+.++ -+|+.+++.+|=+-
T Consensus 131 GrgvlGVvDG~~P~GVE~e~d~~~Rk~l 158 (167)
T 1wvq_A 131 RRGVVGVVDGHSPLGVETEKDREERKKF 158 (167)
T ss_dssp EEEEEEEEESCCCCEECCHHHHHHHHHH
T ss_pred CceEEEEecCCCCCCccCHHHHHHHHHH
Confidence 3678999999887 48999998877443
No 164
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=31.17 E-value=2.4e+02 Score=23.71 Aligned_cols=16 Identities=13% Similarity=0.260 Sum_probs=8.8
Q ss_pred HHHHHHcCCCEEEecc
Q 024250 96 VEDLEKAGINVIQIDE 111 (270)
Q Consensus 96 ~~~l~~~G~~~IQiDE 111 (270)
++.+.++|++.|.|-+
T Consensus 162 ~~~~~~~Ga~~i~l~D 177 (298)
T 2cw6_A 162 TKKFYSMGCYEISLGD 177 (298)
T ss_dssp HHHHHHTTCSEEEEEE
T ss_pred HHHHHHcCCCEEEecC
Confidence 4444555666655554
No 165
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=31.10 E-value=2.1e+02 Score=23.07 Aligned_cols=85 Identities=2% Similarity=-0.000 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCC-CCceEEEeec--------c-CC
Q 024250 88 IALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQ-DTTQIHTHMC--------Y-SN 157 (270)
Q Consensus 88 l~~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~lH~c--------~-g~ 157 (270)
..+.+.+.++...+.|++.|.+--. .. .....+...+.+.+.++++.+... .++.+.+|.. + .+
T Consensus 91 ~~~~~~~~i~~A~~lGa~~v~~~~g-~~-----~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~n~~~~~~~~~~~ 164 (269)
T 3ngf_A 91 FRDNVDIALHYALALDCRTLHAMSG-IT-----EGLDRKACEETFIENFRYAADKLAPHGITVLVEPLNTRNMPGYFIVH 164 (269)
T ss_dssp HHHHHHHHHHHHHHTTCCEEECCBC-BC-----TTSCHHHHHHHHHHHHHHHHHHHGGGTCEEEECCCCTTTSTTBSCCC
T ss_pred HHHHHHHHHHHHHHcCCCEEEEccC-CC-----CCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEeeCCcccCccchhcC
Confidence 3445667777788899998876421 11 111233445667777777665332 2577888852 1 23
Q ss_pred chhHHHHHHhCCC--CEEEEEcc
Q 024250 158 FNDIIHSIIDMDA--DVITIENS 178 (270)
Q Consensus 158 ~~~~~~~l~~~~v--d~l~ld~~ 178 (270)
..+....+.+++- =++.+|..
T Consensus 165 ~~~~~~l~~~v~~~~vg~~~D~~ 187 (269)
T 3ngf_A 165 QLEAVGLVKRVNRPNVAVQLDLY 187 (269)
T ss_dssp HHHHHHHHHHHCCTTEEEEEEHH
T ss_pred HHHHHHHHHHhCCCCCCeEEEhh
Confidence 3455556666554 45667764
No 166
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=30.82 E-value=2e+02 Score=22.82 Aligned_cols=87 Identities=7% Similarity=0.033 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCC-CCceEEEeecc-----C----C
Q 024250 88 IALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQ-DTTQIHTHMCY-----S----N 157 (270)
Q Consensus 88 l~~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~lH~c~-----g----~ 157 (270)
..+.+.+.++...+.|++.|.+.-..... ..+.+...+.+.+.++++.+... .++++.+|... + +
T Consensus 83 ~~~~~~~~i~~a~~lG~~~v~~~~g~~~~-----~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~~E~~~~~~~~~~~~~~ 157 (260)
T 1k77_A 83 AHADIDLALEYALALNCEQVHVMAGVVPA-----GEDAERYRAVFIDNIRYAADRFAPHGKRILVEALSPGVKPHYLFSS 157 (260)
T ss_dssp HHHHHHHHHHHHHHTTCSEEECCCCBCCT-----TSCHHHHHHHHHHHHHHHHHHHGGGTCEEEECCCCTTTSTTBSCCS
T ss_pred HHHHHHHHHHHHHHcCCCEEEECcCCCCC-----CCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEeCCccCCCcCccCC
Confidence 34566777777888999998774221111 11233445666777777654332 24778888762 1 2
Q ss_pred chhHHHHHHhCC--CCEEEEEccC
Q 024250 158 FNDIIHSIIDMD--ADVITIENSR 179 (270)
Q Consensus 158 ~~~~~~~l~~~~--vd~l~ld~~~ 179 (270)
..+....+.+++ -=++.+|..+
T Consensus 158 ~~~~~~l~~~~~~~~~g~~~D~~h 181 (260)
T 1k77_A 158 QYQALAIVEEVARDNVFIQLDTFH 181 (260)
T ss_dssp HHHHHHHHHHHCCTTEEEEEEHHH
T ss_pred HHHHHHHHHHhCCCCEEEEeeHHH
Confidence 234555555554 3456677643
No 167
>2i7g_A Monooxygenase, AGR_C_4197P; alpha-beta, TIM barrel, helix-bundle, structural genomics, P protein structure initiative; HET: MSE; 1.73A {Agrobacterium tumefaciens str}
Probab=30.77 E-value=85 Score=27.43 Aligned_cols=55 Identities=16% Similarity=0.210 Sum_probs=36.9
Q ss_pred CCCCHHHHHHHHHHHhccccCCceEecCCCCCCCCCHhHHHHHHHHHHH-HHHHHHHH
Q 024250 209 RIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVA-AAKLLRTQ 265 (270)
Q Consensus 209 ~~e~~e~v~~~i~~~~~~~~~~~l~vsp~Cgl~~~~~~~a~~kL~~l~~-~a~~~~~~ 265 (270)
.+.|+++|+++|++..+..+.+.+++.+.++ ..+.+...+-|+.+++ +.=.|++.
T Consensus 307 lvGtpe~va~~l~~~~~~~G~d~~~l~~~~~--~~~~~~~~~~l~~~a~~V~P~l~~~ 362 (376)
T 2i7g_A 307 FLGEPELVAEKIIKAHGVFKNDRFLLQMAIG--LMPHDQIMRGIELYGTKVAPLVRKE 362 (376)
T ss_dssp EEESHHHHHHHHHHHHHHHCCSEEEEECCCT--TCCHHHHHHHHHHHHHTHHHHHHHH
T ss_pred EEeCHHHHHHHHHHHHHhcCCCeEEEEeCCC--CCCHHHHHHHHHHHHHhhhhhhccc
Confidence 4689999999999987667889999988654 2344544455666554 22344443
No 168
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=30.41 E-value=2.6e+02 Score=24.03 Aligned_cols=69 Identities=9% Similarity=0.095 Sum_probs=43.2
Q ss_pred CeeeceEecCCCC----CCCCHHHHHHHHHHHhccccCCceEecCCCCCCCCC----HhHHHHHHHHHHHHHHHHHHH
Q 024250 196 AGIGPGVYDIHSP----RIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRK----YTEVKPALSNMVAAAKLLRTQ 265 (270)
Q Consensus 196 ~~l~~GvVd~~~~----~~e~~e~v~~~i~~~~~~~~~~~l~vsp~Cgl~~~~----~~~a~~kL~~l~~~a~~~~~~ 265 (270)
+....|++|.... ...+++.+.++.++..+. |++.+=|.-..+-.... +-...+-++.++.+.+.++++
T Consensus 27 ~~~vMGIlNvTpDSFsd~~~~~~~al~~A~~~v~~-GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~ 103 (314)
T 3tr9_A 27 EPAVMGIINVSPNSFYHPHLDLNSALRTAEKMVDE-GADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKR 103 (314)
T ss_dssp SCEEEEEEECSTTCSBCBCCSHHHHHHHHHHHHHT-TCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEEeCCCCchhhccCCHHHHHHHHHHHHHC-CCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhh
Confidence 4678899987543 346788888888887654 66665555322222222 333446777788777777764
No 169
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=28.88 E-value=2.5e+02 Score=28.84 Aligned_cols=76 Identities=17% Similarity=0.196 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHHHHHhCCC
Q 024250 91 AIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDA 170 (270)
Q Consensus 91 ~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~~l~~~~v 170 (270)
.+.+.++++.++|++.|.|-+.+=.. .|....+. +..+++.+ .+ ++.++.|.-+|---...-...++++
T Consensus 693 ~~~~~a~~~~~~Ga~~i~l~Dt~G~~-------~P~~~~~l-v~~l~~~~-~~--~i~~H~Hnt~G~a~An~laA~~aGa 761 (1150)
T 3hbl_A 693 YYVKLAKELEREGFHILAIKDMAGLL-------KPKAAYEL-IGELKSAV-DL--PIHLHTHDTSGNGLLTYKQAIDAGV 761 (1150)
T ss_dssp HHHHHHHHHHHTTCSEEEEEETTCCC-------CHHHHHHH-HHHHHHHC-CS--CEEEEECBTTSCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCCCeeeEcCccCCC-------CHHHHHHH-HHHHHHhc-CC--eEEEEeCCCCcHHHHHHHHHHHhCC
Confidence 45555677788999999987753221 23333332 33333332 22 2333444344433233334577899
Q ss_pred CEEEEEc
Q 024250 171 DVITIEN 177 (270)
Q Consensus 171 d~l~ld~ 177 (270)
|.+..=.
T Consensus 762 ~~vD~ai 768 (1150)
T 3hbl_A 762 DIIDTAV 768 (1150)
T ss_dssp SEEEEBC
T ss_pred CEEEEec
Confidence 9765544
No 170
>1rlh_A Conserved hypothetical protein; structural genomics, T. acidophilum, PSI, protein structure initiative; 1.80A {Thermoplasma acidophilum} SCOP: d.256.1.1
Probab=26.59 E-value=30 Score=26.92 Aligned_cols=24 Identities=33% Similarity=0.329 Sum_probs=14.2
Q ss_pred CeeeceEecCCCC-CCCCHHHHHHH
Q 024250 196 AGIGPGVYDIHSP-RIPSTEEIADR 219 (270)
Q Consensus 196 ~~l~~GvVd~~~~-~~e~~e~v~~~ 219 (270)
++=.+||||+.++ -+|+.+++.+|
T Consensus 138 GRgvlGVvDG~~P~GVE~eed~~~R 162 (173)
T 1rlh_A 138 GNGVLGVIDGYSPVGVESDADIEKR 162 (173)
T ss_dssp SEEEEEEEESCCCCSCCC-------
T ss_pred CcEEEEEecCCCCCCccCHHHHHHH
Confidence 4678999999877 58999888776
No 171
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=26.46 E-value=1.4e+02 Score=24.97 Aligned_cols=78 Identities=10% Similarity=0.134 Sum_probs=39.8
Q ss_pred HHHHHHHHHH-cCCCEEEec--cCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccC--CchhHHHHHH
Q 024250 92 IKDEVEDLEK-AGINVIQID--EAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYS--NFNDIIHSII 166 (270)
Q Consensus 92 ~~~~~~~l~~-~G~~~IQiD--EP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g--~~~~~~~~l~ 166 (270)
+.+.++.+.+ +|++.|.|+ -|.....-..-..++ ++....++.+++. +. .++.+.+..+ +..+....+.
T Consensus 113 ~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~-~~~~eii~~v~~~---~~--~pv~vk~~~~~~~~~~~a~~l~ 186 (311)
T 1ep3_A 113 YVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDP-EVAAALVKACKAV---SK--VPLYVKLSPNVTDIVPIAKAVE 186 (311)
T ss_dssp HHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCH-HHHHHHHHHHHHH---CS--SCEEEEECSCSSCSHHHHHHHH
T ss_pred HHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCH-HHHHHHHHHHHHh---cC--CCEEEEECCChHHHHHHHHHHH
Confidence 3444455556 899988775 222100000000022 1223334444433 22 3456665532 3445677889
Q ss_pred hCCCCEEEE
Q 024250 167 DMDADVITI 175 (270)
Q Consensus 167 ~~~vd~l~l 175 (270)
+.++|+|.+
T Consensus 187 ~~G~d~i~v 195 (311)
T 1ep3_A 187 AAGADGLTM 195 (311)
T ss_dssp HTTCSEEEE
T ss_pred HcCCCEEEE
Confidence 999999998
No 172
>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A*
Probab=26.39 E-value=3.4e+02 Score=24.08 Aligned_cols=87 Identities=14% Similarity=0.097 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCEEEeccCccccCCC----CCCccHHHH---HHHHHHHHHHHhcCCCCCceEEEeecc
Q 024250 83 ETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLP----LRKSEHAFY---LDWAVHSFRITNCGVQDTTQIHTHMCY 155 (270)
Q Consensus 83 ~l~~~l~~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~----~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~lH~c~ 155 (270)
+.+.++++.+.+ .-|.++|.++|+||+-.....-+ ..+ +++.| ++...+.++.. +++++||+..
T Consensus 29 ~~i~~~ad~~~~--~gl~~~G~~~~~iDdgW~~~~~d~~G~~~~-~~~kFP~Gl~~l~~~i~~~------Glk~Giw~~~ 99 (417)
T 1szn_A 29 SKFLSAAELIVS--SGLLDAGYNYVNIDDCWSMKDGRVDGHIAP-NATRFPDGIDGLAKKVHAL------GLKLGIYSTA 99 (417)
T ss_dssp HHHHHHHHHHHH--TTHHHHTCCEEECCSSCBCTTCCBTTBCCB-CTTTCTTHHHHHHHHHHHT------TCEEEEEEES
T ss_pred HHHHHHHHHHHH--cCchhhCCCEEEECCCccCCCCCCCCCEEE-CcccCCcCHHHHHHHHHHc------CCEEEEEeCC
Confidence 334444444332 23578899999999976642100 000 11112 22333333321 3567777754
Q ss_pred CC------------chhHHHHHHhCCCCEEEEEcc
Q 024250 156 SN------------FNDIIHSIIDMDADVITIENS 178 (270)
Q Consensus 156 g~------------~~~~~~~l~~~~vd~l~ld~~ 178 (270)
|. ...-...+.+.+||.|-+|+.
T Consensus 100 g~~~c~~~Pgs~~~~~~d~~~~~~wGvdylK~D~~ 134 (417)
T 1szn_A 100 GTATCAGYPASLGYEDVDAADFADWGVDYLKYDNC 134 (417)
T ss_dssp SSBCTTSCBCCTTCHHHHHHHHHHTTCCEEEEECC
T ss_pred CCchhccCcchHhHHHHHHHHHHHcCCCEEEECCC
Confidence 32 122356788999999999986
No 173
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=25.60 E-value=2.6e+02 Score=22.40 Aligned_cols=30 Identities=7% Similarity=0.141 Sum_probs=22.0
Q ss_pred eEEEeecc-CC--chhHHHHHHhCCCCEEEEEcc
Q 024250 148 QIHTHMCY-SN--FNDIIHSIIDMDADVITIENS 178 (270)
Q Consensus 148 ~i~lH~c~-g~--~~~~~~~l~~~~vd~l~ld~~ 178 (270)
++++|+.. ++ +.+.++.+.++++|++-+ +.
T Consensus 3 klg~~~~~~~~~~~~~~~~~~~~~G~~~vEl-~~ 35 (270)
T 3aam_A 3 RYGFHLSIAGKKGVAGAVEEATALGLTAFQI-FA 35 (270)
T ss_dssp EEEEBCCCCSTTHHHHHHHHHHHHTCSCEEE-ES
T ss_pred eeeeccccCCCccHHHHHHHHHHcCCCEEEE-eC
Confidence 46777654 43 556788889999999988 54
No 174
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=25.55 E-value=3e+02 Score=23.15 Aligned_cols=78 Identities=14% Similarity=-0.017 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHHHHHhCC
Q 024250 90 LAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMD 169 (270)
Q Consensus 90 ~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~~l~~~~ 169 (270)
+.+.+.++++.++|++.|.|-+..=.. .|....+.+....+.+-..-+.++.++.|.-+|---.+.-..++.+
T Consensus 150 ~~~~~~~~~~~~~G~~~i~l~DT~G~~-------~P~~v~~lv~~l~~~~~~~~~~~l~~H~Hnd~Gla~AN~laA~~aG 222 (293)
T 3ewb_X 150 AFLIEAVQTAIDAGATVINIPDTVGYT-------NPTEFGQLFQDLRREIKQFDDIIFASHCHDDLGMATANALAAIENG 222 (293)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSSSCC-------CHHHHHHHHHHHHHHCTTGGGSEEEEECBCTTSCHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCCEEEecCCCCCC-------CHHHHHHHHHHHHHhcCCccCceEEEEeCCCcChHHHHHHHHHHhC
Q ss_pred CCEEE
Q 024250 170 ADVIT 174 (270)
Q Consensus 170 vd~l~ 174 (270)
++.+.
T Consensus 223 a~~vd 227 (293)
T 3ewb_X 223 ARRVE 227 (293)
T ss_dssp CCEEE
T ss_pred CCEEE
No 175
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=25.29 E-value=1.3e+02 Score=25.88 Aligned_cols=74 Identities=14% Similarity=-0.005 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCC----CCceEEEeeccCCchhHHHHH
Q 024250 90 LAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQ----DTTQIHTHMCYSNFNDIIHSI 165 (270)
Q Consensus 90 ~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~lH~c~g~~~~~~~~l 165 (270)
+.+.+.++++.++|++.|.|-+..=.... ..+.+.++.+.+.++ .++.++.|.-+|---.+.-.-
T Consensus 151 ~~~~~~~~~~~~~G~~~i~l~DT~G~~~P-----------~~v~~lv~~l~~~~~~~~~~~i~~H~Hnd~GlA~AN~laA 219 (325)
T 3eeg_A 151 AFLARMVEAVIEAGADVVNIPDTTGYMLP-----------WQYGERIKYLMDNVSNIDKAILSAHCHNDLGLATANSLAA 219 (325)
T ss_dssp HHHHHHHHHHHHHTCSEEECCBSSSCCCH-----------HHHHHHHHHHHHHCSCGGGSEEEECBCCTTSCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEecCccCCcCH-----------HHHHHHHHHHHHhCCCCCceEEEEEeCCCCCHHHHHHHHH
Q ss_pred HhCCCCEEE
Q 024250 166 IDMDADVIT 174 (270)
Q Consensus 166 ~~~~vd~l~ 174 (270)
.+.+++.+.
T Consensus 220 ~~aGa~~vd 228 (325)
T 3eeg_A 220 LQNGARQVE 228 (325)
T ss_dssp HHHTCCEEE
T ss_pred HHhCCCEEE
No 176
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=25.27 E-value=3e+02 Score=22.94 Aligned_cols=80 Identities=6% Similarity=-0.063 Sum_probs=42.5
Q ss_pred HHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHH----------HHHHHHHHHHHhcC-CCCCceEEEeeccCC---
Q 024250 92 IKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFY----------LDWAVHSFRITNCG-VQDTTQIHTHMCYSN--- 157 (270)
Q Consensus 92 ~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~----------~~~~~~~~~~~~~~-~~~~~~i~lH~c~g~--- 157 (270)
..+.++.|.++|+++|.|+=|.=-...+. ...+.. .+.+.+.++++-+. .+ +++++-+|+..
T Consensus 34 ~~~~~~~l~~~GaD~iElgiPfSDP~aDG--p~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~--~Pivlm~Y~npv~~ 109 (267)
T 3vnd_A 34 SLKIIQTLVDNGADALELGFPFSDPLADG--PVIQGANLRSLAAGTTSSDCFDIITKVRAQHPD--MPIGLLLYANLVFA 109 (267)
T ss_dssp HHHHHHHHHHTTCSSEEEECCCSCCTTCC--HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT--CCEEEEECHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCCCCCC--HHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCC--CCEEEEecCcHHHH
Confidence 44567788899999999997752111111 011111 11223344443322 22 45666666421
Q ss_pred --chhHHHHHHhCCCCEEEE
Q 024250 158 --FNDIIHSIIDMDADVITI 175 (270)
Q Consensus 158 --~~~~~~~l~~~~vd~l~l 175 (270)
...-+..+.++++|++-+
T Consensus 110 ~g~e~f~~~~~~aGvdgvii 129 (267)
T 3vnd_A 110 NGIDEFYTKAQAAGVDSVLI 129 (267)
T ss_dssp HCHHHHHHHHHHHTCCEEEE
T ss_pred hhHHHHHHHHHHcCCCEEEe
Confidence 133456778899999665
No 177
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=25.18 E-value=2.6e+02 Score=22.26 Aligned_cols=31 Identities=6% Similarity=0.184 Sum_probs=22.9
Q ss_pred ceEEEeecc-C--CchhHHHHHHhCCCCEEEEEc
Q 024250 147 TQIHTHMCY-S--NFNDIIHSIIDMDADVITIEN 177 (270)
Q Consensus 147 ~~i~lH~c~-g--~~~~~~~~l~~~~vd~l~ld~ 177 (270)
+++++|++. + ++.+.++.+.+++++++.+-.
T Consensus 7 m~lg~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~ 40 (272)
T 2q02_A 7 TRFCINRKIAPGLSIEAFFRLVKRLEFNKVELRN 40 (272)
T ss_dssp GGEEEEGGGCTTSCHHHHHHHHHHTTCCEEEEET
T ss_pred hhhhhcccccCCCCHHHHHHHHHHcCCCEEEeec
Confidence 457777764 2 355778888999999998864
No 178
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=25.14 E-value=1.9e+02 Score=24.55 Aligned_cols=74 Identities=11% Similarity=0.056 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCC-CCceEEEeeccCCchhHHHHHHhC
Q 024250 90 LAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQ-DTTQIHTHMCYSNFNDIIHSIIDM 168 (270)
Q Consensus 90 ~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~lH~c~g~~~~~~~~l~~~ 168 (270)
+.+.+.++++.++|++.|.|-+-.=.... ..+.+.++.+.+.++ .++.++.|--+|---.+.-...+.
T Consensus 157 ~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P-----------~~v~~lv~~l~~~~~~~~l~~H~Hnd~Gla~AN~laAv~a 225 (307)
T 1ydo_A 157 EQVIRLSEALFEFGISELSLGDTIGAANP-----------AQVETVLEALLARFPANQIALHFHDTRGTALANMVTALQM 225 (307)
T ss_dssp HHHHHHHHHHHHHTCSCEEEECSSCCCCH-----------HHHHHHHHHHHTTSCGGGEEEECBGGGSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCcCH-----------HHHHHHHHHHHHhCCCCeEEEEECCCCchHHHHHHHHHHh
Q ss_pred CCCEEE
Q 024250 169 DADVIT 174 (270)
Q Consensus 169 ~vd~l~ 174 (270)
+++.+.
T Consensus 226 Ga~~vd 231 (307)
T 1ydo_A 226 GITVFD 231 (307)
T ss_dssp TCCEEE
T ss_pred CCCEEE
No 179
>3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A*
Probab=25.07 E-value=3.7e+02 Score=23.97 Aligned_cols=91 Identities=10% Similarity=0.143 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCEEEeccCccccCCCCCC---ccHHHH---HHHHHHHHHHHhcCCCCCceEEEee--
Q 024250 82 HETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRK---SEHAFY---LDWAVHSFRITNCGVQDTTQIHTHM-- 153 (270)
Q Consensus 82 ~~l~~~l~~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~---~~~~~~---~~~~~~~~~~~~~~~~~~~~i~lH~-- 153 (270)
++.+.+.++.+.+. -|.++|.++|+||+-.....-+... .+++.| +....+.++. . +++.+|++
T Consensus 35 e~~i~~~ad~~~~~--Gl~~~G~~~~~iDDgW~~~~rd~~G~~~~~~~kFP~Gl~~l~~~ih~--~----Glk~Giw~~~ 106 (404)
T 3hg3_A 35 EKLFMEMAELMVSE--GWKDAGYEYLCIDDCWMAPQRDSEGRLQADPQRFPHGIRQLANYVHS--K----GLKLGIYADV 106 (404)
T ss_dssp HHHHHHHHHHHHHT--THHHHTCCEEECCSSCBCSSCCTTSCCCBCTTTSTTHHHHHHHHHHH--T----TCEEEEEEES
T ss_pred HHHHHHHHHHHHHC--CcHhhCCeEEEECCCcCCCCCCCCCCeeeChhhcCCCHHHHHHHHHH--C----CCeeEEEecC
Confidence 34455555444321 2567899999999987652111000 011111 2222333332 1 35566654
Q ss_pred ----ccC------CchhHHHHHHhCCCCEEEEEccCC
Q 024250 154 ----CYS------NFNDIIHSIIDMDADVITIENSRS 180 (270)
Q Consensus 154 ----c~g------~~~~~~~~l~~~~vd~l~ld~~~~ 180 (270)
|.| .+..-...+.+-+||.|-+|+...
T Consensus 107 g~~tC~~~pGs~~~~~~da~~fa~WGvDylK~D~C~~ 143 (404)
T 3hg3_A 107 GNKTCAGFPGSFGYYDIDAQTFADWGVDLLKFAGCYC 143 (404)
T ss_dssp SSBCTTSSBCCTTCHHHHHHHHHHHTCCEEEEECCSC
T ss_pred CccccCCCCccHHHHHHHHHHHHHhCCcEEEecCcCC
Confidence 522 222456678999999999998653
No 180
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=24.81 E-value=2.1e+02 Score=27.76 Aligned_cols=74 Identities=18% Similarity=0.064 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCC-CCCceEEEeeccCCchhHHHHHHhC
Q 024250 90 LAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGV-QDTTQIHTHMCYSNFNDIIHSIIDM 168 (270)
Q Consensus 90 ~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~lH~c~g~~~~~~~~l~~~ 168 (270)
+.+.+.++++.++||++|.|-+-.=.... ..+.+.++.+.+.+ +..+.++.|.-+|---.+.-...+.
T Consensus 261 e~~~~~a~~l~~~Ga~~I~l~DT~G~~~P-----------~~v~~lV~~lk~~~p~~~I~~H~Hnd~GlAvANslaAveA 329 (718)
T 3bg3_A 261 QYYMGLAEELVRAGTHILCIKDMAGLLKP-----------TACTMLVSSLRDRFPDLPLHIHTHDTSGAGVAAMLACAQA 329 (718)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECTTSCCCH-----------HHHHHHHHHHHHHSTTCCEEEECCCTTSCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCEEEEcCcCCCcCH-----------HHHHHHHHHHHHhCCCCeEEEEECCCccHHHHHHHHHHHh
Q ss_pred CCCEEE
Q 024250 169 DADVIT 174 (270)
Q Consensus 169 ~vd~l~ 174 (270)
+++.+.
T Consensus 330 Ga~~VD 335 (718)
T 3bg3_A 330 GADVVD 335 (718)
T ss_dssp TCSEEE
T ss_pred CCCEEE
No 181
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=24.75 E-value=2.8e+02 Score=23.49 Aligned_cols=130 Identities=8% Similarity=0.007 Sum_probs=68.4
Q ss_pred HHHHHHHcCCC-EEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHHHHHhCCCCEE
Q 024250 95 EVEDLEKAGIN-VIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVI 173 (270)
Q Consensus 95 ~~~~l~~~G~~-~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~~l~~~~vd~l 173 (270)
.+++..+.+.. +||+.+-.+.. . .. +......+.+.+..+ +++.||.=-|.--+.+....+++++.+
T Consensus 34 vl~AAe~~~sPvIlq~s~~~~~y-~-----g~----~~~~~~v~~~a~~~~--VPValHlDHg~~~e~i~~ai~~GFtSV 101 (286)
T 1gvf_A 34 ILEVCSEMRSPVILAGTPGTFKH-I-----AL----EEIYALCSAYSTTYN--MPLALHLDHHESLDDIRRKVHAGVRSA 101 (286)
T ss_dssp HHHHHHHHTCCCEEEECTTHHHH-S-----CH----HHHHHHHHHHHHHTT--SCBEEEEEEECCHHHHHHHHHTTCCEE
T ss_pred HHHHHHHhCCCEEEECChhHHhh-c-----CH----HHHHHHHHHHHHhCC--CcEEEEcCCCCCHHHHHHHHHcCCCeE
Confidence 34444455666 48998755443 1 11 222333333333333 567888754422345667788999999
Q ss_pred EEEccCCCc-hhHHHhhhcc----cCCC--eeeceEecC---------CCCCCCCHHHHHHHHHHHhccccCCceEecCC
Q 024250 174 TIENSRSDE-KLLSVFREGV----KYGA--GIGPGVYDI---------HSPRIPSTEEIADRINKMLAVLETNILWVNPD 237 (270)
Q Consensus 174 ~ld~~~~~~-~~l~~l~~~~----~~~~--~l~~GvVd~---------~~~~~e~~e~v~~~i~~~~~~~~~~~l~vsp~ 237 (270)
-+|-+..+. ++++.-++.+ ..|- ..=+|.|-+ ......+|+++.+-+++. +.+ .|+.+
T Consensus 102 MiDgS~lp~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgg~ed~~~~~~~~~~~T~Peea~~Fv~~T----gvD--~LAva 175 (286)
T 1gvf_A 102 MIDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLGGVEDDMSVDAESAFLTDPQEAKRFVELT----GVD--SLAVA 175 (286)
T ss_dssp EECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCC-----------CCSSCCHHHHHHHHHHH----CCS--EEEEC
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEEeeccCcccCcccccccccCCCHHHHHHHHHHH----CCC--EEEee
Confidence 999877443 4544433310 1111 112233322 112458999998888763 223 45555
Q ss_pred CCCCC
Q 024250 238 CGLKT 242 (270)
Q Consensus 238 Cgl~~ 242 (270)
-|-.|
T Consensus 176 iGt~H 180 (286)
T 1gvf_A 176 IGTAH 180 (286)
T ss_dssp SSCCS
T ss_pred cCccc
Confidence 55554
No 182
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=24.67 E-value=2.3e+02 Score=23.26 Aligned_cols=18 Identities=6% Similarity=-0.010 Sum_probs=13.6
Q ss_pred HHHHHhCCCCEEEEEccC
Q 024250 162 IHSIIDMDADVITIENSR 179 (270)
Q Consensus 162 ~~~l~~~~vd~l~ld~~~ 179 (270)
+.....+++|++.+....
T Consensus 121 i~~a~~~GAD~VlL~~~~ 138 (254)
T 1vc4_A 121 LEEARAFGASAALLIVAL 138 (254)
T ss_dssp HHHHHHTTCSEEEEEHHH
T ss_pred HHHHHHcCCCEEEECccc
Confidence 455788999999987643
No 183
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=24.64 E-value=3.3e+02 Score=27.96 Aligned_cols=74 Identities=18% Similarity=0.166 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEee--ccCCchhHHHHHHhC
Q 024250 91 AIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHM--CYSNFNDIIHSIIDM 168 (270)
Q Consensus 91 ~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~--c~g~~~~~~~~l~~~ 168 (270)
.+.+.++++.++|+++|.|-+..=.. .|....+. +..+++.+ + .++.+|+ -+|---.+.-...++
T Consensus 710 ~~~~~~~~~~~~Ga~~i~l~DT~G~~-------~P~~~~~l-v~~l~~~~---~--~~i~~H~Hnd~GlAvAn~laAv~a 776 (1165)
T 2qf7_A 710 YYTNLAVELEKAGAHIIAVKDMAGLL-------KPAAAKVL-FKALREAT---G--LPIHFHTHDTSGIAAATVLAAVEA 776 (1165)
T ss_dssp HHHHHHHHHHHTTCSEEEEEETTCCC-------CHHHHHHH-HHHHHHHC---S--SCEEEEECBTTSCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCEEEEeCccCCc-------CHHHHHHH-HHHHHHhc---C--CeEEEEECCCCCHHHHHHHHHHHh
Confidence 45555677888999999888743321 23333332 33333322 2 3455554 334332333344778
Q ss_pred CCCEEEEEc
Q 024250 169 DADVITIEN 177 (270)
Q Consensus 169 ~vd~l~ld~ 177 (270)
+++.+..=.
T Consensus 777 Ga~~vd~ti 785 (1165)
T 2qf7_A 777 GVDAVDAAM 785 (1165)
T ss_dssp TCSEEEEBC
T ss_pred CCCEEEecc
Confidence 888776554
No 184
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=24.53 E-value=2.1e+02 Score=25.12 Aligned_cols=77 Identities=8% Similarity=-0.056 Sum_probs=37.9
Q ss_pred HHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeec--cCCchhHHHHHHhCC
Q 024250 92 IKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMC--YSNFNDIIHSIIDMD 169 (270)
Q Consensus 92 ~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c--~g~~~~~~~~l~~~~ 169 (270)
+.+.++++.++|++.|.|-+..=.. .|..+.+.+ ..+.+.+...+ ..++.+|+= +|---.+.-.-.+.+
T Consensus 159 ~~~~~~~~~~~Ga~~i~l~DT~G~~-------~P~~~~~lv-~~l~~~~~~~~-~~~l~~H~Hnd~GlAvAN~laAv~aG 229 (370)
T 3rmj_A 159 LAEICGAVIEAGATTINIPDTVGYS-------IPYKTEEFF-RELIAKTPNGG-KVVWSAHCHNDLGLAVANSLAALKGG 229 (370)
T ss_dssp HHHHHHHHHHHTCCEEEEECSSSCC-------CHHHHHHHH-HHHHHHSTTGG-GSEEEEECBCTTSCHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCEEEecCccCCc-------CHHHHHHHH-HHHHHhCCCcC-ceEEEEEeCCCCChHHHHHHHHHHhC
Confidence 4455667778899888887743221 333333322 22332222211 145677742 232212222346788
Q ss_pred CCEEEEEc
Q 024250 170 ADVITIEN 177 (270)
Q Consensus 170 vd~l~ld~ 177 (270)
++.+..=.
T Consensus 230 a~~vd~tv 237 (370)
T 3rmj_A 230 ARQVECTV 237 (370)
T ss_dssp CCEEEEBG
T ss_pred CCEEEEec
Confidence 88765544
No 185
>1fvp_A Flavoprotein 390, FP390; flavin-binding protein; HET: FMA; 2.70A {Photobacterium phosphoreum} SCOP: c.1.16.2
Probab=24.41 E-value=1.2e+02 Score=24.03 Aligned_cols=45 Identities=9% Similarity=-0.061 Sum_probs=31.4
Q ss_pred CCCHHHHHH-HHHHHhccccCCceEecCCCCCCCCCHhHHHHHHHHHHH
Q 024250 210 IPSTEEIAD-RINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVA 257 (270)
Q Consensus 210 ~e~~e~v~~-~i~~~~~~~~~~~l~vsp~Cgl~~~~~~~a~~kL~~l~~ 257 (270)
++||++|++ +|++..+..+.+.+++....+ .+.+...+-|+.+.+
T Consensus 174 vGtpe~v~~~~l~~~~~~~G~de~~~~~~~~---~~~~~~~~slel~a~ 219 (231)
T 1fvp_A 174 TGSYKDCLSYVANLAGKFDNTVDFLLCFESM---QDQNKKKSVMIDLNN 219 (231)
T ss_dssp EESSHHHHHHHHHHHHHTTTCEEEEECCCSC---CCHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHhCcCeEEEEecCC---CCHHHHHHHHHHHHH
Confidence 578999999 999988878889998865322 245544455555544
No 186
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=23.73 E-value=3.4e+02 Score=23.05 Aligned_cols=17 Identities=18% Similarity=-0.033 Sum_probs=13.9
Q ss_pred HHHHHHhCCCCEEEEEc
Q 024250 161 IIHSIIDMDADVITIEN 177 (270)
Q Consensus 161 ~~~~l~~~~vd~l~ld~ 177 (270)
-+..+.++++|++.|=.
T Consensus 116 dI~~~~~~GAdGvVfG~ 132 (287)
T 3iwp_A 116 DIRLAKLYGADGLVFGA 132 (287)
T ss_dssp HHHHHHHTTCSEEEECC
T ss_pred HHHHHHHcCCCEEEEee
Confidence 45678889999999875
No 187
>3nwr_A A rubisco-like protein; lyase; HET: KCX; 1.50A {Burkholderia fungorum}
Probab=23.41 E-value=4.1e+02 Score=23.94 Aligned_cols=80 Identities=11% Similarity=0.082 Sum_probs=50.7
Q ss_pred HHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchh---HHHHHHhCCC
Q 024250 94 DEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFND---IIHSIIDMDA 170 (270)
Q Consensus 94 ~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~---~~~~l~~~~v 170 (270)
+.+.++..-|+|+|-=||+.-.... . .+++-...+.++++++.+.-....--.+++. ++..+ ..+.+.+++.
T Consensus 181 ~~~ye~~~GGlDfiKDDE~~~~q~f--~--p~~eRv~~v~eai~rA~~eTGe~k~y~~NiT-~~~~em~~Ra~~a~e~G~ 255 (432)
T 3nwr_A 181 ALVRELCEAGVDFIKDDEVCANPAH--A--PLAERVRAVMSEVRRYRERSGRPVMVAFNIT-DDLDAMRRHAELVEREGG 255 (432)
T ss_dssp HHHHHHHHHTCSEEECCTTCSSCTT--S--CHHHHHHHHHHHHHHHHHHHSCCCEEEEECC-SCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhcCCceeECCCCCCCCCc--c--cHHHHHHHHHHHHHHHHHHhCCcceEEeecC-CCHHHHHHHHHHHHHcCC
Confidence 3344455679999999998765321 1 3444456677777776654322222244555 66554 4567789999
Q ss_pred CEEEEEcc
Q 024250 171 DVITIENS 178 (270)
Q Consensus 171 d~l~ld~~ 178 (270)
+++-+|..
T Consensus 256 ~~~mvd~~ 263 (432)
T 3nwr_A 256 SCVMASIN 263 (432)
T ss_dssp CEEEEEHH
T ss_pred CEEEEecc
Confidence 99999963
No 188
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=23.17 E-value=3.1e+02 Score=22.65 Aligned_cols=65 Identities=9% Similarity=0.040 Sum_probs=36.4
Q ss_pred HHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeecc-CCch--hHHHHHHhCC
Q 024250 93 KDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCY-SNFN--DIIHSIIDMD 169 (270)
Q Consensus 93 ~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~-g~~~--~~~~~l~~~~ 169 (270)
.+-.+++.++||+.|.+.- +. + .+.++++.+.++.++. +. |. +.++ .-.+.|.+++
T Consensus 171 i~ra~a~~eAGAd~i~~e~--~~--------~--------~~~~~~i~~~~~~P~n--~~-~~~~~~~p~~~~~eL~~lG 229 (255)
T 2qiw_A 171 IKRIKLMEQAGARSVYPVG--LS--------T--------AEQVERLVDAVSVPVN--IT-AHPVDGHGAGDLATLAGLG 229 (255)
T ss_dssp HHHHHHHHHHTCSEEEECC--CC--------S--------HHHHHHHHTTCSSCBE--EE-CBTTTBBTTBCHHHHHHTT
T ss_pred HHHHHHHHHcCCcEEEEcC--CC--------C--------HHHHHHHHHhCCCCEE--EE-ecCCCCCCCCCHHHHHHcC
Confidence 3346778888999888842 11 1 1234455555654443 22 32 2211 2357888888
Q ss_pred CCEEEEEcc
Q 024250 170 ADVITIENS 178 (270)
Q Consensus 170 vd~l~ld~~ 178 (270)
+..+++-..
T Consensus 230 v~~v~~~~~ 238 (255)
T 2qiw_A 230 VRRVTFGPL 238 (255)
T ss_dssp CCEEECTTH
T ss_pred CCEEEEHHH
Confidence 888876543
No 189
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=22.59 E-value=1.5e+02 Score=23.63 Aligned_cols=92 Identities=4% Similarity=-0.123 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCC-CceEEEeeccC-Cch
Q 024250 82 HETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQD-TTQIHTHMCYS-NFN 159 (270)
Q Consensus 82 ~~l~~~l~~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~lH~c~g-~~~ 159 (270)
.+..+...+.+.+.++...+.|+++|.+.-.......+. ..+...+.+.+.++++.+.... ++.+.+|...+ +..
T Consensus 68 ~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~---~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~~~~~~ 144 (254)
T 3ayv_A 68 PEVRGLTLRRLLFGLDRAAELGADRAVFHSGIPHGRTPE---EALERALPLAEALGLVVRRARTLGVRLLLENSHEPHPE 144 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCSEEEEECCCCTTCCHH---HHHHTHHHHHHHTHHHHHHHHHHTCEEEEECSSCSSGG
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEECCCCCcccccc---cHHHHHHHHHHHHHHHHHHHhhcCCEEEEcCCCCCCHH
Q ss_pred hHHHHHHhCCCCEEEEEc
Q 024250 160 DIIHSIIDMDADVITIEN 177 (270)
Q Consensus 160 ~~~~~l~~~~vd~l~ld~ 177 (270)
+....+.+++ +.+.+-+
T Consensus 145 ~~~~l~~~v~-~~vg~~~ 161 (254)
T 3ayv_A 145 ALRPVLEAHA-GELGFCF 161 (254)
T ss_dssp GTHHHHHHHT-TSSEEEE
T ss_pred HHHHHHHhcC-cCEEEEE
No 190
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=22.20 E-value=3.4e+02 Score=23.22 Aligned_cols=70 Identities=14% Similarity=0.274 Sum_probs=42.2
Q ss_pred CCeeeceEecCCCC------CCCCHHHHHHHHHHHhccccCCceEecCCCCCCCCCHhHHHHHHHHHHHHHHHHHHH
Q 024250 195 GAGIGPGVYDIHSP------RIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 265 (270)
Q Consensus 195 ~~~l~~GvVd~~~~------~~e~~e~v~~~i~~~~~~~~~~~l~vsp~Cgl~~~~~~~a~~kL~~l~~~a~~~~~~ 265 (270)
.+....||+|...- ...+++.+.++.++..+. |.+.+=|.-...-...++-...+-++.++.+.+.++++
T Consensus 8 ~~~~iMGIlNvTPDSFsdgg~~~~~~~a~~~a~~~v~~-GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~ 83 (314)
T 2vef_A 8 AKTVICGIINVTPDSFSDGGQFFALEQALQQARKLIAE-GASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKE 83 (314)
T ss_dssp CCCEEEEEEECCC---------CHHHHHHHHHHHHHHT-TCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhh
Confidence 46789999998652 234677887777777654 55555444322112233444557788888888887765
No 191
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=22.15 E-value=2e+02 Score=24.42 Aligned_cols=67 Identities=12% Similarity=0.159 Sum_probs=36.8
Q ss_pred HHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEe-eccCCchhHHHHHHhCCCC
Q 024250 93 KDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTH-MCYSNFNDIIHSIIDMDAD 171 (270)
Q Consensus 93 ~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH-~c~g~~~~~~~~l~~~~vd 171 (270)
.+-.+++.++||+.|.+.-+. + +.+ ..+.+.+. ++.+.++++. +-||.. ..+.|.++++.
T Consensus 173 i~Ra~ay~eAGAd~i~~e~~~-----~----~~~-~~~~i~~~-------~~~~~P~i~~~~~~~~~--~~~eL~~lGv~ 233 (295)
T 1s2w_A 173 LKRAEAYRNAGADAILMHSKK-----A----DPS-DIEAFMKA-------WNNQGPVVIVPTKYYKT--PTDHFRDMGVS 233 (295)
T ss_dssp HHHHHHHHHTTCSEEEECCCS-----S----SSH-HHHHHHHH-------HTTCSCEEECCSTTTTS--CHHHHHHHTCC
T ss_pred HHHHHHHHHcCCCEEEEcCCC-----C----CHH-HHHHHHHH-------cCCCCCEEEeCCCCCCC--CHHHHHHcCCc
Confidence 334677889999999887311 0 111 11212222 2212333332 223433 36899999999
Q ss_pred EEEEEcc
Q 024250 172 VITIENS 178 (270)
Q Consensus 172 ~l~ld~~ 178 (270)
.+++-..
T Consensus 234 ~v~~~~~ 240 (295)
T 1s2w_A 234 MVIWANH 240 (295)
T ss_dssp EEEECSH
T ss_pred EEEEChH
Confidence 9999863
No 192
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=22.14 E-value=3.1e+02 Score=21.99 Aligned_cols=69 Identities=14% Similarity=0.093 Sum_probs=38.4
Q ss_pred HHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCch--hHHHHHHhCCCCE
Q 024250 95 EVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFN--DIIHSIIDMDADV 172 (270)
Q Consensus 95 ~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~--~~~~~l~~~~vd~ 172 (270)
.++.+.++|+++|++-+..-... ..... .+.++++.+..+ +++++ . |... +-+..++++++|+
T Consensus 40 ~a~~~~~~G~~~i~v~d~~~~~~--~~~~~--------~~~i~~i~~~~~--ipvi~--~-Ggi~~~~~~~~~l~~Gad~ 104 (247)
T 3tdn_A 40 WVVEVEKRGAGEILLTSIDRDGT--KSGYD--------TEMIRFVRPLTT--LPIIA--S-GGAGKMEHFLEAFLRGADK 104 (247)
T ss_dssp HHHHHHHTTCSEEEEEETTTTTC--SSCCC--------HHHHHHHGGGCC--SCEEE--E-SCCCSHHHHHHHHHTTCSE
T ss_pred HHHHHHHcCCCEEEEEecCcccC--CCccc--------HHHHHHHHHhCC--CCEEE--e-CCCCCHHHHHHHHHcCCCe
Confidence 45566788999999876432210 11112 234555554443 33332 2 4332 3456677899999
Q ss_pred EEEEcc
Q 024250 173 ITIENS 178 (270)
Q Consensus 173 l~ld~~ 178 (270)
+.+-..
T Consensus 105 V~ig~~ 110 (247)
T 3tdn_A 105 VSINTA 110 (247)
T ss_dssp ECCSHH
T ss_pred eehhhH
Confidence 988753
No 193
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=22.01 E-value=3e+02 Score=23.16 Aligned_cols=66 Identities=12% Similarity=0.134 Sum_probs=42.4
Q ss_pred CeeeceEecCCCC------CCCCHHHHHHHHHHHhccccCCceEecC-C--CCCCCCCHhHHHHHHHHHHHHHHHHHHH
Q 024250 196 AGIGPGVYDIHSP------RIPSTEEIADRINKMLAVLETNILWVNP-D--CGLKTRKYTEVKPALSNMVAAAKLLRTQ 265 (270)
Q Consensus 196 ~~l~~GvVd~~~~------~~e~~e~v~~~i~~~~~~~~~~~l~vsp-~--Cgl~~~~~~~a~~kL~~l~~~a~~~~~~ 265 (270)
+...+|++|.... ...+++.+.++.++..+. |.+.+=|.- | -|-...+++ +-++.++.+.+.++++
T Consensus 14 ~~~imGilN~TpdSFsdgg~~~~~~~a~~~a~~~v~~-GAdiIDIGgestrPga~~v~~~---eE~~rv~pvi~~l~~~ 88 (282)
T 1aj0_A 14 HPHVMGILNVTPDSFSDGGTHNSLIDAVKHANLMINA-GATIIDVGGESTRPGAAEVSVE---EELQRVIPVVEAIAQR 88 (282)
T ss_dssp SCEEEEEEECCTTTSCCCCCCTHHHHHHHHHHHHHHH-TCSEEEEESSCCSTTCCCCCHH---HHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCCccccccccCCHHHHHHHHHHHHHC-CCCEEEECCCcCCCCCCcCCHH---HHHHHHHHHHHHHHhh
Confidence 4678899987542 235678888888777654 555554443 1 232333444 7788888888888765
No 194
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A*
Probab=21.83 E-value=3.6e+02 Score=26.04 Aligned_cols=22 Identities=18% Similarity=0.386 Sum_probs=16.7
Q ss_pred HHHHHHHHcCCCEEEeccCccc
Q 024250 94 DEVEDLEKAGINVIQIDEAALR 115 (270)
Q Consensus 94 ~~~~~l~~~G~~~IQiDEP~l~ 115 (270)
+.++.+++.|+++|.||+-...
T Consensus 354 ~~ad~~~~~G~~~~viDDGW~~ 375 (732)
T 2xn2_A 354 TIVDKAKKLGLEMFVLDDGWFG 375 (732)
T ss_dssp HHHHHHHHTTCCEEEECSSSBT
T ss_pred HHHHHHHHcCCcEEEEcCcccc
Confidence 3445567889999999987763
No 195
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=21.61 E-value=3.4e+02 Score=22.26 Aligned_cols=22 Identities=14% Similarity=0.247 Sum_probs=17.8
Q ss_pred HHHHHHHHHcCCCEEEeccCcc
Q 024250 93 KDEVEDLEKAGINVIQIDEAAL 114 (270)
Q Consensus 93 ~~~~~~l~~~G~~~IQiDEP~l 114 (270)
.+.++.|.++|+++|.+.=|.-
T Consensus 34 ~~~~~~l~~~G~D~IElG~P~s 55 (262)
T 2ekc_A 34 LKAFKEVLKNGTDILEIGFPFS 55 (262)
T ss_dssp HHHHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHHHHHcCCCEEEECCCCC
Confidence 4457778889999999988873
No 196
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=21.31 E-value=3.2e+02 Score=21.88 Aligned_cols=89 Identities=13% Similarity=0.103 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccC-------C
Q 024250 85 CYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYS-------N 157 (270)
Q Consensus 85 ~~~l~~~~~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g-------~ 157 (270)
.+...+.+.+.++...+.|+++|.+.-..... ..+.+...+.+.+.++++.+.. .++.+.++...+ +
T Consensus 84 r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~-----~~~~~~~~~~~~~~l~~l~a~~-~gv~l~lEn~~~~~~~~~~~ 157 (285)
T 1qtw_A 84 LEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLM-----QISEEDCLARIAESINIALDKT-QGVTAVIENTAGQGSNLGFK 157 (285)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEECCCBCTT-----TSCHHHHHHHHHHHHHHHHHHC-SSCEEEEECCCCCTTBCCSS
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEECcCCCCC-----CCCHHHHHHHHHHHHHHHHhcc-CCCEEEEecCCCCCCcccCC
Confidence 34455677778888889999998775322111 0123344667777888876432 257788887643 2
Q ss_pred chhHHHHHHhC-C--CCEEEEEccC
Q 024250 158 FNDIIHSIIDM-D--ADVITIENSR 179 (270)
Q Consensus 158 ~~~~~~~l~~~-~--vd~l~ld~~~ 179 (270)
..+....+.++ + -=++.+|..+
T Consensus 158 ~~~~~~l~~~v~~~~~~g~~~D~~H 182 (285)
T 1qtw_A 158 FEHLAAIIDGVEDKSRVGVCIDTCH 182 (285)
T ss_dssp HHHHHHHHHHCSCGGGEEEEEEHHH
T ss_pred HHHHHHHHHhhcCccceEEEEEhHh
Confidence 23455555555 3 3456788643
No 197
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=21.23 E-value=3.1e+02 Score=21.75 Aligned_cols=30 Identities=7% Similarity=0.157 Sum_probs=21.7
Q ss_pred eEEEeec-c---CCchhHHHHHHhCCCCEEEEEc
Q 024250 148 QIHTHMC-Y---SNFNDIIHSIIDMDADVITIEN 177 (270)
Q Consensus 148 ~i~lH~c-~---g~~~~~~~~l~~~~vd~l~ld~ 177 (270)
++++|+. + .++.+.+..+.+++++++-+-.
T Consensus 6 ~lg~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~ 39 (275)
T 3qc0_A 6 GLSINLATIREQCGFAEAVDICLKHGITAIAPWR 39 (275)
T ss_dssp TEEEEGGGGTTTCCHHHHHHHHHHTTCCEEECBH
T ss_pred cceeeeeeccCCCCHHHHHHHHHHcCCCEEEecc
Confidence 4566653 2 2456788899999999998755
No 198
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*
Probab=21.20 E-value=3.5e+02 Score=22.24 Aligned_cols=89 Identities=12% Similarity=0.077 Sum_probs=48.1
Q ss_pred ceEEEeec-c-CCchhHHHHHHhCCCC--EEEEEccC--CCchhHHHhhhcccCCCeeeceEecCCCCCCCCHHHHHHHH
Q 024250 147 TQIHTHMC-Y-SNFNDIIHSIIDMDAD--VITIENSR--SDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRI 220 (270)
Q Consensus 147 ~~i~lH~c-~-g~~~~~~~~l~~~~vd--~l~ld~~~--~~~~~l~~l~~~~~~~~~l~~GvVd~~~~~~e~~e~v~~~i 220 (270)
.++.+|+- . ....+.++.|.+.+++ .+.+.... .+.+.++.+.+ .|-.++++-. +. ....+.+...+.+
T Consensus 165 ~pv~iH~~~~~~~~~~~~~~l~~~~~~~~~~~i~H~~~~~~~~~~~~~~~---~G~~i~~~~~-~~-~~~~~~~~~~~~i 239 (314)
T 2vc7_A 165 VPIITHSNAHNNTGLEQQRILTEEGVDPGKILIGHLGDTDNIDYIKKIAD---KGSFIGLDRY-GL-DLFLPVDKRNETT 239 (314)
T ss_dssp CCEEEECCTTTTHHHHHHHHHHHTTCCGGGEEETTGGGCCCHHHHHHHHH---TTCEEEECCT-TC-TTTSCHHHHHHHH
T ss_pred CEEEEeCCCcccChHHHHHHHHHcCCCcccEEEECCCCCCCHHHHHHHHH---cCCEEEEeCC-Cc-ccCCCHHHHHHHH
Confidence 45789974 2 2334677777777764 34444332 23444444443 2444544411 11 1113445566666
Q ss_pred HHHhccccCCceEecCCCCC
Q 024250 221 NKMLAVLETNILWVNPDCGL 240 (270)
Q Consensus 221 ~~~~~~~~~~~l~vsp~Cgl 240 (270)
.+.++.-+.+++++++||..
T Consensus 240 ~~~~~~g~~drilleTD~~~ 259 (314)
T 2vc7_A 240 LRLIKDGYSDKIMISHDYCC 259 (314)
T ss_dssp HHHHHTTCTTTEEECCCCBS
T ss_pred HHHHHcCCCCeEEEcCCccc
Confidence 66665433589999999964
No 199
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=20.66 E-value=4.3e+02 Score=23.09 Aligned_cols=67 Identities=16% Similarity=0.253 Sum_probs=39.0
Q ss_pred HHHHHHHHHcCCCEEEeccCccccCCCCCCccHHHHHHHHHHHHHHHhcCCCCCceEEEeeccCCchhHHHHHHhCCCCE
Q 024250 93 KDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADV 172 (270)
Q Consensus 93 ~~~~~~l~~~G~~~IQiDEP~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lH~c~g~~~~~~~~l~~~~vd~ 172 (270)
.+.++.+.++|+++|.||-..- .... ..+.++.+.+..+ +..++...| .+. +....+.++++|+
T Consensus 110 ~~~~~~lieaGvd~I~idta~G---------~~~~----~~~~I~~ik~~~p-~v~Vi~G~v-~t~-e~A~~a~~aGAD~ 173 (366)
T 4fo4_A 110 EERVKALVEAGVDVLLIDSSHG---------HSEG----VLQRIRETRAAYP-HLEIIGGNV-ATA-EGARALIEAGVSA 173 (366)
T ss_dssp HHHHHHHHHTTCSEEEEECSCT---------TSHH----HHHHHHHHHHHCT-TCEEEEEEE-CSH-HHHHHHHHHTCSE
T ss_pred HHHHHHHHhCCCCEEEEeCCCC---------CCHH----HHHHHHHHHHhcC-CCceEeeee-CCH-HHHHHHHHcCCCE
Confidence 4567888899999999983210 1111 2223333322232 245555555 334 3456788999999
Q ss_pred EEE
Q 024250 173 ITI 175 (270)
Q Consensus 173 l~l 175 (270)
+.+
T Consensus 174 I~v 176 (366)
T 4fo4_A 174 VKV 176 (366)
T ss_dssp EEE
T ss_pred EEE
Confidence 998
No 200
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=20.58 E-value=3.2e+02 Score=21.66 Aligned_cols=29 Identities=14% Similarity=0.047 Sum_probs=20.7
Q ss_pred eEEEeecc--C--CchhHHHHHHhCCCCEEEEE
Q 024250 148 QIHTHMCY--S--NFNDIIHSIIDMDADVITIE 176 (270)
Q Consensus 148 ~i~lH~c~--g--~~~~~~~~l~~~~vd~l~ld 176 (270)
+++++++. . ++.+.++.+.+++++++.+-
T Consensus 2 klg~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~ 34 (278)
T 1i60_A 2 KLCFNEATTLENSNLKLDLELCEKHGYDYIEIR 34 (278)
T ss_dssp EEEEEGGGGTTTCCHHHHHHHHHHTTCSEEEEE
T ss_pred eeEechhhcccCCCHHHHHHHHHHhCCCEEEEc
Confidence 35566542 2 35577888899999999887
Done!