BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024251
(270 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A2SU08|DHQS_METLZ 3-dehydroquinate synthase OS=Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z) GN=Mlab_1653 PE=3 SV=1
Length = 345
Score = 112 bits (281), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 116/230 (50%), Gaps = 26/230 (11%)
Query: 49 KPKRVWIWTESKQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGD 108
+ + + E K ++ +A+E G+ + E++ L A+L +G+
Sbjct: 11 RADHLQTYDERKAIVASALESGYTHIILRPEDEALRHLGRYTAIL-----ADGKNLMYSG 65
Query: 109 RRVGSIIEVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQGSGKTVFAISKT 168
R+G ++ ++ +E+++ N++I +W+VIP EN+++ FQ + +V+ KT
Sbjct: 66 ERIGVLLNLTGAEEMEEAYSLKNAVPNLIISPENWKVIPLENLISRFQNAETSVYICVKT 125
Query: 169 PSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYFDG-RNEVSNLLSLMKATVTRVDVAG 227
P EA++ + +E G GIV+ D A LA F G RN+ ++ L A VT++
Sbjct: 126 PEEARLAFQTMEVGCDGIVI-TPDGPADLAA---FSGIRNDEYPIVDLETAVVTKISTLS 181
Query: 228 MGDRVCVDLCR----------------LFLVHSECLESNYIASRPFRVNA 261
+GDRVC+D C LFLV SE ES Y+ SRPFRVNA
Sbjct: 182 LGDRVCIDTCSLLERGEGMLIGSQSSCLFLVCSESFESEYVNSRPFRVNA 231
>sp|Q12UJ7|DHQS_METBU 3-dehydroquinate synthase OS=Methanococcoides burtonii (strain DSM
6242) GN=Mbur_2000 PE=3 SV=2
Length = 379
Score = 103 bits (257), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 84/144 (58%), Gaps = 24/144 (16%)
Query: 142 DWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVED---VKAVLA 198
DW+VIP EN++A+ Q S + A + EA++ LE +E G G++L +D +KA +A
Sbjct: 132 DWKVIPLENLIAALQDSDVKIIAGVRDQDEAKLALETMEHGSEGVLLDSDDPNTIKATVA 191
Query: 199 LKEYFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCR----------------LFLV 242
+ E R+ + + L L+ VT+V+ GMGDRVCVD C +FLV
Sbjct: 192 VAE----RSGIED-LKLVPGKVTKVEAVGMGDRVCVDTCNMMTKGEGMLVGSQASGMFLV 246
Query: 243 HSECLESNYIASRPFRVNAVSFNA 266
HSE ES Y+ASRPFRVNA + +A
Sbjct: 247 HSESEESPYVASRPFRVNAGAVHA 270
>sp|O26680|DHQS_METTH 3-dehydroquinate synthase OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=MTH_580 PE=3 SV=2
Length = 374
Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 120/259 (46%), Gaps = 55/259 (21%)
Query: 56 WTESKQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDP-------LFIKEGE------ 102
W E K +TAA+E G + V +++ ++ + L+ P L ++GE
Sbjct: 13 WDEKKTFITAALESGIDHIVDTADSGRIK-KLGNLTLISPDEDADIVLVGRDGEGDGTLE 71
Query: 103 ----------------VYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIVIDLPDWQVI 146
+ +SG R+V + +E+ + + + + +++ DW++I
Sbjct: 72 LPETLEYSRDIEMASELSESG-RQVAAYVEIRSKAHEELARRLGRVVDYLILVGEDWKII 130
Query: 147 PAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVED---VKAVLALKEYF 203
P ENI+A Q + A EA++ LE LE G G++++ D +K + AL E
Sbjct: 131 PLENIIADLQEEDVKLIAAVADVDEARVALETLEHGTDGVLIEPADISQIKDIAALLENI 190
Query: 204 DGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCR----------------LFLVHSECL 247
+ S L AT+TR++ G GDRVCVD C LFLVHSE L
Sbjct: 191 E-----SETYELKPATITRIEPIGSGDRVCVDTCSIMGIGEGMLVGSYSQGLFLVHSESL 245
Query: 248 ESNYIASRPFRVNAVSFNA 266
ES Y+ASRPFRVNA A
Sbjct: 246 ESEYVASRPFRVNAGPVQA 264
>sp|Q2NI00|DHQS_METST 3-dehydroquinate synthase OS=Methanosphaera stadtmanae (strain DSM
3091) GN=Msp_0090 PE=3 SV=1
Length = 359
Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 113/240 (47%), Gaps = 31/240 (12%)
Query: 56 WTESKQVMTAAVERGWNTFVFLSENQQLAI-------------DWSTIALLDPLFIKEGE 102
W + K+ + ++E G++ + L + + D + + L + + + + +
Sbjct: 12 WNDRKEAIVDSLESGFDHIMDLDNAETIKKLGSVTIISDKEDSDITLLGLNNKITMADIK 71
Query: 103 VYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQGSGKTV 162
+ V + +E++ + + A+ +++ +W+VIP ENI+AS Q +
Sbjct: 72 KAQESGKEVAAYVEINNKDDELLVSKLGTVADYVILKGKNWKVIPLENIIASLQNRTSKI 131
Query: 163 FAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYFDGRNEVSNLLSLMKATVTR 222
EA++ LE +E G G++L D + L + ++ S L ATVT+
Sbjct: 132 IVDVPNYEEAKLALETMEHGSDGVLLSSNDGNEIRKLGALIEKVSKES--YDLKAATVTK 189
Query: 223 VDVAGMGDRVCVDLCR----------------LFLVHSECLESNYIASRPFRVNAVSFNA 266
V+ G+GDRVCVD C LFLVHSE LES Y+ASRPFRVNA +A
Sbjct: 190 VESVGIGDRVCVDTCSMMNVGDGMLVGSFASGLFLVHSETLESEYVASRPFRVNAGPVHA 249
>sp|A0B6K6|DHQS_METTP 3-dehydroquinate synthase OS=Methanosaeta thermophila (strain DSM
6194 / PT) GN=Mthe_0539 PE=3 SV=2
Length = 362
Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 116/246 (47%), Gaps = 40/246 (16%)
Query: 56 WTESKQVMTAAVERGWNTFVFLSENQQLAIDWSTIAL--------------LDPLFIKEG 101
W + K ++T A+E G++ V ++ +L + +I + +D +E
Sbjct: 13 WDDVKPLITTALESGFDCVVVSRDHIELVRELGSIRIACFGRERGSEDLLIMDTSVPREN 72
Query: 102 EV--YDSGDRRVGSIIEVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQGSG 159
++ + R +G +E+ + ++ + +++ DW+VIP EN++A+ QG
Sbjct: 73 QIKSVEKIGRPIGGYVEIRSKEDELFATELGKHVDYLLVVGTDWKVIPLENMIAALQGYD 132
Query: 160 KTVFAISKTPSEAQIFLEALEQGLGGIVLKVED---VKAVLALKEYFDGRNEVSNLLSLM 216
+ + ++ EA++ L LE G G++L D +K V A E + + L
Sbjct: 133 CKIISCVRSSEEAEVALSTLEHGADGVLLDTRDPSEIKRVQAAAERLG-----MSRIDLK 187
Query: 217 KATVTRVDVAGMGDRVCVDLCRL----------------FLVHSECLESNYIASRPFRVN 260
ATV V GMGDRVCVD C L FLV SE ES Y+A+RPFRVN
Sbjct: 188 TATVVAVKPVGMGDRVCVDTCSLMRRGEGMLVGSQSRAFFLVQSEAEESPYVAARPFRVN 247
Query: 261 AVSFNA 266
A + +A
Sbjct: 248 AGAVHA 253
>sp|Q0W131|DHQS_UNCMA 3-dehydroquinate synthase OS=Uncultured methanogenic archaeon RC-I
GN=UNCMA_03530 PE=3 SV=1
Length = 374
Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 80/146 (54%), Gaps = 19/146 (13%)
Query: 136 IVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKA 195
++I+ DW+VIP EN++A GSG + A ++ EA + L+ LE+G G+++ V+D
Sbjct: 122 LIIEGDDWKVIPLENLIAELGGSGTKILAKARDIDEASVALQTLEKGADGVLVDVDD--- 178
Query: 196 VLALKEYFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCR----------------L 239
L ++E + L L T+T V AG GDRVC+D C L
Sbjct: 179 PLKVREIARAVSTKQAGLGLTPVTITAVRDAGTGDRVCIDTCSLMTPGEGMLIGNQSSGL 238
Query: 240 FLVHSECLESNYIASRPFRVNAVSFN 265
FLV SE ES Y+ASRPFRVNA + +
Sbjct: 239 FLVQSEAEESPYVASRPFRVNAGAVH 264
>sp|A4G0J1|DHQS_METM5 3-dehydroquinate synthase OS=Methanococcus maripaludis (strain C5 /
ATCC BAA-1333) GN=MmarC5_1678 PE=3 SV=1
Length = 361
Score = 97.1 bits (240), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 80/147 (54%), Gaps = 18/147 (12%)
Query: 136 IVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKA 195
+V++ DW +IP ENI+A G + ++ +A+ E LE+G+ G+VL ED+
Sbjct: 107 VVLEGSDWTIIPLENIIADLFGEEIKIVSVVTNVKDAEAAYEILEKGVDGVVLIPEDINE 166
Query: 196 VLALKEYFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCR----------------L 239
V + + N S L L ATVT+++ G GDRVC+D C +
Sbjct: 167 VKDFSKLIERMN--SESLKLDYATVTKIEPVGSGDRVCIDTCSMMEMGEGMLIGSYSRGM 224
Query: 240 FLVHSECLESNYIASRPFRVNAVSFNA 266
FLVHSE +E+ Y+A+RPFRVNA +A
Sbjct: 225 FLVHSETVENPYVATRPFRVNAGPVHA 251
>sp|O67751|DHQSH_AQUAE 3-dehydroquinate synthase homolog OS=Aquifex aeolicus (strain VF5)
GN=aq_1922 PE=3 SV=1
Length = 331
Score = 95.5 bits (236), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 115/235 (48%), Gaps = 44/235 (18%)
Query: 51 KRVWIWTE--SKQVMTAAVERGWNTFVFLSENQQLAIDW-STIALLDPLFIKEGEVYDSG 107
K W+W E +++++ A+E G N V + + + I ++ P G
Sbjct: 2 KEFWVWVEPFDRKIVSVALEAGANAVVIPEKGRVEEVKKVGRITVIAP----------DG 51
Query: 108 DRRVGS-----IIEVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQGSGKTV 162
D ++G +I+ +E P + + ++++ DW VIP EN++A + +
Sbjct: 52 DLKLGEDVVYVLIKGKEDEERAAKYPPNVK---VIVETTDWTVIPLENLIAQRE----EL 104
Query: 163 FAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYFDGRNEVSNLLSLMKATVTR 222
+A+ K EA++ L+ LE+G+ G+VLK D+ + + + +E L L+ +T+
Sbjct: 105 YAVVKNAQEAEVALQTLEKGVKGVVLKSRDINEIKKVGQIV---SEHEEKLELVTIKITK 161
Query: 223 VDVAGMGDRVCVDLCRL----------------FLVHSECLESNYIASRPFRVNA 261
+ G+GDRVCVD L FLVH+E E+ Y+A+RPFRVNA
Sbjct: 162 ILPLGLGDRVCVDTISLLHRGEGMLVGNSSGGMFLVHAETEENPYVAARPFRVNA 216
>sp|A9A8T5|DHQS_METM6 3-dehydroquinate synthase OS=Methanococcus maripaludis (strain C6 /
ATCC BAA-1332) GN=MmarC6_0943 PE=3 SV=1
Length = 361
Score = 94.4 bits (233), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 80/147 (54%), Gaps = 18/147 (12%)
Query: 136 IVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKA 195
IV++ DW +IP ENI+A G + ++ + +A+ E LE+G+ G+VL D+
Sbjct: 107 IVLEGSDWTIIPLENIIADLFGEEIKIVSVVTSVKDAEAAYEILEKGVDGVVLIPNDINE 166
Query: 196 VLALKEYFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCR----------------L 239
V + + N S + L ATVT+++ G GDRVC+D C +
Sbjct: 167 VKDFSKLIERMN--SESVKLDYATVTKIEPVGSGDRVCIDTCSMMEMGEGMLIGSYSRGM 224
Query: 240 FLVHSECLESNYIASRPFRVNAVSFNA 266
FLVHSE +E+ Y+A+RPFRVNA +A
Sbjct: 225 FLVHSETVENPYVATRPFRVNAGPVHA 251
>sp|Q58646|DHQS_METJA 3-dehydroquinate synthase OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=MJ1249 PE=1 SV=1
Length = 361
Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 84/155 (54%), Gaps = 24/155 (15%)
Query: 131 GQAENIVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVL-- 188
G +NI+++ DW +IP EN++A + A + EA++ E LE+G G++L
Sbjct: 102 GFVDNIILEGRDWTIIPLENLIADLFHRDVKIVASVNSVDEAKVAYEILEKGTDGVLLNP 161
Query: 189 -KVEDVKAVLALKEYFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCR--------- 238
+ED+K + L E + ++L ATVT+V+ G GDRVC+D C
Sbjct: 162 KNLEDIKELSKLIEEMNKEK-----VALDVATVTKVEPIGSGDRVCIDTCSLMKIGEGML 216
Query: 239 -------LFLVHSECLESNYIASRPFRVNAVSFNA 266
LFLVHSE +E+ Y+A+RPFRVNA +A
Sbjct: 217 IGSYSRALFLVHSETVENPYVATRPFRVNAGPVHA 251
>sp|C0QRE8|DHQSH_PERMH 3-dehydroquinate synthase homolog OS=Persephonella marina (strain
DSM 14350 / EX-H1) GN=PERMA_1476 PE=3 SV=1
Length = 331
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 106/218 (48%), Gaps = 30/218 (13%)
Query: 60 KQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVST 119
K+++T A+E G + + + ++ A + + + K+G + D I+ +
Sbjct: 13 KKIVTTAIESGADYIIIPEDKEEEAKKLGRVNFI--IADKKGNLTDDF-----VIVTIKN 65
Query: 120 PQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEAL 179
Q+ ++ + +++ DW +IP EN++A + ++A K EA I + L
Sbjct: 66 KQDEEKAAQLAKAGKKVIVRTTDWTIIPLENLIAQSE----NIYAEVKNADEASIAVGIL 121
Query: 180 EQGLGGIVLKVEDVKAVLALKEYFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCRL 239
E+G+ G+VL+ ED+ + + E + + L++A VT + GMGDRV VD L
Sbjct: 122 EKGVKGVVLETEDLNEIKRVASVI---KETTEKVELIRAKVTAIIPVGMGDRVAVDTTSL 178
Query: 240 F----------------LVHSECLESNYIASRPFRVNA 261
F LVH+E ES Y+ASRPFRVNA
Sbjct: 179 FKRGEGMLVGNSSAGMILVHAETEESPYVASRPFRVNA 216
>sp|A6VHZ4|DHQS_METM7 3-dehydroquinate synthase OS=Methanococcus maripaludis (strain C7 /
ATCC BAA-1331) GN=MmarC7_1003 PE=3 SV=1
Length = 361
Score = 92.4 bits (228), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 80/147 (54%), Gaps = 18/147 (12%)
Query: 136 IVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKA 195
++++ DW +IP ENI+A G + ++ +A+ E LE+G+ G+VL +D+
Sbjct: 107 VILEGSDWTIIPLENIIADLFGEEIKLVSVVTNVKDAEAAYEILEKGVDGVVLIPKDINE 166
Query: 196 VLALKEYFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCR----------------L 239
V + + N S + L ATVT+++ G GDRVC+D C +
Sbjct: 167 VKDFSKLIERMN--SESVKLDYATVTKIEPVGSGDRVCIDTCSMMEMGEGMLIGSYSRGM 224
Query: 240 FLVHSECLESNYIASRPFRVNAVSFNA 266
FLVHSE +E+ Y+A+RPFRVNA +A
Sbjct: 225 FLVHSETVENPYVATRPFRVNAGPVHA 251
>sp|A5UJ82|DHQS_METS3 3-dehydroquinate synthase OS=Methanobrevibacter smithii (strain PS
/ ATCC 35061 / DSM 861) GN=Msm_0055 PE=3 SV=1
Length = 368
Score = 90.9 bits (224), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 113/259 (43%), Gaps = 65/259 (25%)
Query: 56 WTESKQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFI----KEGEVY-----DS 106
W + K+++T A+E G + + L D+ I L + I + ++Y
Sbjct: 7 WDDKKEMITTALESGISYVLDLD-------DYDKIQKLGNVKIVANSDDADIYLVGINGE 59
Query: 107 GDRRVGSII---EVSTPQELQQLQPA--------------DGQAENIVIDL--------- 140
GD GS+I +++ Q+LQ+ + A D E + + L
Sbjct: 60 GD---GSLILSEDLNQSQDLQEAKKAKREGKTVCAYVEITDKNHEQLAVSLGSVADYIIL 116
Query: 141 --PDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLA 198
DW VIP ENI+A Q + + A A++ +E LE G G++ + D +
Sbjct: 117 ISTDWTVIPLENIIADLQKADVKIIAAVADEDGAKLAIETLEHGTDGVIFEANDFNQIKK 176
Query: 199 LKEYFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLC----------------RLFLV 242
+ + +++ L ATVT V G GDRVCVD LFLV
Sbjct: 177 IAQLVVDASKIK--YDLKVATVTNVKPLGSGDRVCVDTTDMMKPGEGMLIGSYSKSLFLV 234
Query: 243 HSECLESNYIASRPFRVNA 261
HSE LES Y+ASRPFRVNA
Sbjct: 235 HSESLESEYVASRPFRVNA 253
>sp|Q6M1B0|DHQS_METMP 3-dehydroquinate synthase OS=Methanococcus maripaludis (strain S2 /
LL) GN=MMP0006 PE=3 SV=1
Length = 361
Score = 90.9 bits (224), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 79/147 (53%), Gaps = 18/147 (12%)
Query: 136 IVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKA 195
+V++ DW +IP ENI+A + ++ +A+ E LE+G+ G+VL +D+
Sbjct: 107 VVLEGSDWTIIPLENIIADLFSEEIKIVSVVTNVKDAEAAYEILEKGVDGVVLIPKDINE 166
Query: 196 VLALKEYFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCR----------------L 239
V + + N S + L ATVT+++ G GDRVC+D C +
Sbjct: 167 VKDFSKLIERMN--SESVKLDYATVTKIEPVGSGDRVCIDTCSMMEMGEGMLIGSYSRGM 224
Query: 240 FLVHSECLESNYIASRPFRVNAVSFNA 266
FLVHSE +E+ Y+A+RPFRVNA +A
Sbjct: 225 FLVHSETVENPYVATRPFRVNAGPVHA 251
>sp|A6UW69|DHQS_META3 3-dehydroquinate synthase OS=Methanococcus aeolicus (strain
Nankai-3 / ATCC BAA-1280) GN=Maeo_1164 PE=3 SV=1
Length = 362
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 80/147 (54%), Gaps = 18/147 (12%)
Query: 136 IVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKA 195
I+++ DW +IP EN++A + +++K ++A+ E LE+G+ G++ +D+
Sbjct: 107 IILEGKDWNIIPLENLIADLFDENIKIVSLAKDINDARTAYEILERGVDGVLYVPKDIND 166
Query: 196 VLALKEYFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCR----------------L 239
V + N S L L AT+T+V+ G GDRVC+D C L
Sbjct: 167 VKDFATLIEKMN--SEKLDLDCATITKVEAIGSGDRVCIDTCSMMEMGEGMLIGSYSRAL 224
Query: 240 FLVHSECLESNYIASRPFRVNAVSFNA 266
FLVH+E +E+ Y+A+RPFRVNA +A
Sbjct: 225 FLVHAETVENPYVATRPFRVNAGPVHA 251
>sp|A7I8L5|DHQS_METB6 3-dehydroquinate synthase OS=Methanoregula boonei (strain 6A8)
GN=Mboo_1559 PE=3 SV=1
Length = 329
Score = 90.1 bits (222), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 112/235 (47%), Gaps = 37/235 (15%)
Query: 51 KRVWIWTE--SKQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGD 108
K+ W+ +K V+T A+E G + V +E I + P +G++ D
Sbjct: 2 KQFWVDARPWNKDVVTTAIESGADAVV--AEKAADVKRLGRITTVAP----DGDLVPGKD 55
Query: 109 RRVGSIIEVS-TPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQGSGKTVFAISK 167
+IE + T + + A+G+ +++ DW VIP EN+VA + A K
Sbjct: 56 -----VIECTITDKASENEAAANGKNRIVIVTTSDWTVIPLENLVAQSD----KIIAEVK 106
Query: 168 TPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYFDGRNEVSNLLSLMKATVTRVDVAG 227
EA++ + LE+G+ GI+LK D V A+ S + L+ TVT++ G
Sbjct: 107 NVHEAELAIHVLEKGVYGILLKTSDPAVVKAVAALV---KSTSGSVQLVPFTVTKIHPVG 163
Query: 228 MGDRVCVDLCRLF----------------LVHSECLESNYIASRPFRVNAVSFNA 266
MGDRVCVD C + LVH+E LE+ Y+A RPFRVNA + +A
Sbjct: 164 MGDRVCVDTCSMLADGDGMLMGNTSSAMLLVHAETLENPYVAPRPFRVNAGAVHA 218
>sp|Q2FQ51|DHQS_METHJ 3-dehydroquinate synthase OS=Methanospirillum hungatei (strain JF-1
/ DSM 864) GN=Mhun_1034 PE=3 SV=1
Length = 328
Score = 90.1 bits (222), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 79/148 (53%), Gaps = 23/148 (15%)
Query: 135 NIVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVK 194
I++ PDW +IP EN+VA G V A+ EA+ L LE+G+ G+++K +D
Sbjct: 78 RIIVHTPDWTIIPLENLVAC----GDNVIAVVSDIKEAEQALTVLEKGVSGVLVKTDDPD 133
Query: 195 AVLALKEYFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCRL--------------- 239
V ++ ++ +S L + TVT V AGMG+RVCVD C L
Sbjct: 134 LVRSICRMV--QSGISGQ-QLHRLTVTTVKPAGMGERVCVDTCSLMVDGEGMLVGNTSSG 190
Query: 240 -FLVHSECLESNYIASRPFRVNAVSFNA 266
FLVH+E L + Y+A RPFRVNA +A
Sbjct: 191 FFLVHAETLVNPYVAPRPFRVNAGGVHA 218
>sp|O30010|DHQS_ARCFU 3-dehydroquinate synthase OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=AF_0229 PE=3 SV=1
Length = 323
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 119/242 (49%), Gaps = 55/242 (22%)
Query: 51 KRVWI------WTESKQVMTAAVERGWNTFV----FLSENQQLAIDWSTIALLDPLFIKE 100
K +W+ W E+K+++ A+E G++ + FL ++L + + D
Sbjct: 2 KEIWLLAESESWDEAKEMLKDAIEIGFDGALVRRDFLERAEKLG-RMKIVPIED------ 54
Query: 101 GEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQGSGK 160
+++++S+ ++ ++ Q E +V+ DW+VIP ENIVA + SGK
Sbjct: 55 ------------AVVKISSAEDQERAL----QREVVVLKFEDWKVIPLENIVA-MKKSGK 97
Query: 161 TVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYFDGRNEVSNLLSLMKATV 220
+ A+ T +A++ L LE+G GI + + L+++++ E + L++A V
Sbjct: 98 VIAAVD-TIEDAKLALTTLERGADGIAVSGDRE----TLRKFYEVVKEEGERVELVRARV 152
Query: 221 TRVDVAGMGDRVCVDLCRL----------------FLVHSECLESNYIASRPFRVNAVSF 264
+ G+G+RVC+D L FLV SE ES Y+ASRPFRVNA S
Sbjct: 153 KEIRPLGVGERVCIDTVTLMTPGEGMLVGNQASFMFLVASESEESEYVASRPFRVNAGSV 212
Query: 265 NA 266
NA
Sbjct: 213 NA 214
>sp|A6URJ1|DHQS_METVS 3-dehydroquinate synthase OS=Methanococcus vannielii (strain SB /
ATCC 35089 / DSM 1224) GN=Mevan_1215 PE=3 SV=1
Length = 361
Score = 87.8 bits (216), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 79/147 (53%), Gaps = 18/147 (12%)
Query: 136 IVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKA 195
I+++ DW +IP ENI+A + ++ ++A+ E LE+G+ G+VL +D+
Sbjct: 107 IILEGKDWTIIPLENIIADLFNEDIKIVSLVNNVNDAKAAYEILEKGVDGVVLVPKDINE 166
Query: 196 VLALKEYFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCR----------------L 239
V + D N N ++L A + +++ G GDRVC+D C +
Sbjct: 167 VKEFSKLIDSMN-FEN-VALDYAVIKKIEPVGSGDRVCIDTCSIMEIGEGMLIGSYSRGM 224
Query: 240 FLVHSECLESNYIASRPFRVNAVSFNA 266
FLVHSE +E+ Y+A+RPFRVNA +A
Sbjct: 225 FLVHSESVENPYVATRPFRVNAGPVHA 251
>sp|Q8TVI1|DHQS_METKA 3-dehydroquinate synthase OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=MK1408 PE=3 SV=1
Length = 402
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 67/141 (47%), Gaps = 16/141 (11%)
Query: 142 DWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKE 201
DW++IP EN++A QG + A ++ EA+I E LE G G++L E + K
Sbjct: 149 DWKIIPLENLIAELQGEKTQLIAGARDAEEARIAFETLEVGSDGVLLDAERIDPSEIKKT 208
Query: 202 YFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCRL----------------FLVHSE 245
+ L+ V V G GDRVCVD C L FL+HSE
Sbjct: 209 AEIAERAAAERFELVAVEVKEVKPIGKGDRVCVDTCSLMSEGEGMLVGSTSRGMFLIHSE 268
Query: 246 CLESNYIASRPFRVNAVSFNA 266
LE+ Y+ RPFRVNA +A
Sbjct: 269 SLENPYVEPRPFRVNAGPVHA 289
>sp|Q46DZ8|DHQS_METBF 3-dehydroquinate synthase OS=Methanosarcina barkeri (strain Fusaro
/ DSM 804) GN=Mbar_A0921 PE=3 SV=1
Length = 380
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 22/149 (14%)
Query: 136 IVIDLPDWQVIPAENIVASFQGSG-KTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVK 194
+++ DW+VIP EN++A Q K +F + K EA++ + LE G G++L +++
Sbjct: 127 LIVTGTDWKVIPLENLIAELQRYDVKIIFGV-KNAEEARLAFKTLETGADGVLLNSGNIQ 185
Query: 195 AVLALKEYFDGRNEVSN-LLSLMKATVTRVDVAGMGDRVCVDLCRL-------------- 239
+ K+ E+ N L A +TRV+ GMGDRVCVD C L
Sbjct: 186 EI---KDTIQAAREMENERTELESAVITRVEPLGMGDRVCVDTCNLMQKGEGMLIGSQAS 242
Query: 240 --FLVHSECLESNYIASRPFRVNAVSFNA 266
FLV+SE +S Y+A+RPFRVNA + ++
Sbjct: 243 GMFLVNSESDDSPYVAARPFRVNAGAVHS 271
>sp|Q18DY6|DHQS_HALWD 3-dehydroquinate synthase OS=Haloquadratum walsbyi (strain DSM
16790) GN=HQ_1155A PE=3 SV=1
Length = 399
Score = 85.5 bits (210), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 74/144 (51%), Gaps = 25/144 (17%)
Query: 142 DWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVED---VKAVLA 198
DW +IP EN++A GS T+ A + EAQ E LE G G++L +D ++ +A
Sbjct: 153 DWTIIPLENLIARI-GSETTLIAGVTSAEEAQTAFETLEIGADGVLLDTDDPDEIRETVA 211
Query: 199 LKEYFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCRLF----------------LV 242
+++ + L L ATV ++ AGM DRVCVD L V
Sbjct: 212 VRDATE-----RETLELEWATVIDIERAGMADRVCVDTANLMQHNEGMLIGSMSRGLIFV 266
Query: 243 HSECLESNYIASRPFRVNAVSFNA 266
H+E ES YIASRPFRVNA + +A
Sbjct: 267 HAETAESPYIASRPFRVNAGAVHA 290
>sp|B8GF73|DHQS_METPE 3-dehydroquinate synthase OS=Methanosphaerula palustris (strain
ATCC BAA-1556 / DSM 19958 / E1-9c) GN=Mpal_2609 PE=3
SV=1
Length = 328
Score = 85.5 bits (210), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 76/147 (51%), Gaps = 23/147 (15%)
Query: 136 IVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKA 195
+++ DW VIP EN+VA +FA + EA++ L LEQG+ G+VL D +
Sbjct: 79 VIVSTGDWTVIPLENLVAQSD----RIFAAVGSVEEARLALTILEQGVAGVVLMTTDPEV 134
Query: 196 VLALKEYFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCRL---------------- 239
+ + G + L+ T+T V GMGDRVC+D C +
Sbjct: 135 IRTVAAMVRG---AGAKVPLVPFTLTVVRQLGMGDRVCIDTCSILADGEGMLVGNTSSAF 191
Query: 240 FLVHSECLESNYIASRPFRVNAVSFNA 266
FLVH+E +E+ Y+A RPFRVNA + +A
Sbjct: 192 FLVHAETIENLYVAPRPFRVNAGAVHA 218
>sp|Q3IRN3|DHQS_NATPD 3-dehydroquinate synthase OS=Natronomonas pharaonis (strain DSM
2160 / ATCC 35678) GN=NP_2238A PE=3 SV=1
Length = 388
Score = 84.3 bits (207), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 70/141 (49%), Gaps = 19/141 (13%)
Query: 142 DWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKE 201
DWQ+IP EN++A G + A +T EA+ E LE G ++L ++ + A E
Sbjct: 141 DWQIIPLENLIARI-GDETDLIAGVQTAEEAETAFETLELGADAVLLDTDNPDEIRATVE 199
Query: 202 YFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCR----------------LFLVHSE 245
D L L +ATVT ++ G DRVCVD LF VH+E
Sbjct: 200 ARDATE--RETLDLQRATVTEIEETGSADRVCVDTASMLEHDEGMLVGSMSRGLFFVHAE 257
Query: 246 CLESNYIASRPFRVNAVSFNA 266
+S Y+ASRPFRVNA + +A
Sbjct: 258 TADSPYVASRPFRVNAGAVHA 278
>sp|B1L5W7|DHQS_KORCO 3-dehydroquinate synthase OS=Korarchaeum cryptofilum (strain OPF8)
GN=Kcr_1100 PE=3 SV=1
Length = 334
Score = 84.0 bits (206), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 88/168 (52%), Gaps = 29/168 (17%)
Query: 113 SIIEVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEA 172
++ ++ P++++ L+ + +I+ W++IP ENI+A G+ ++AI+ EA
Sbjct: 61 TLFKIRGPEDVEILR-REANERKFLIESESWKIIPLENIIAEV--GGERIYAIADDLEEA 117
Query: 173 QIFLEALEQGLGGIVLKVED---VKAVLALKEYFDGRNEVSNLLSLMKATVTRVDVAGMG 229
+ L LE G+ G+V+ ++D ++ L L E N L+L +A VT V GMG
Sbjct: 118 RSLLGVLEIGVKGVVIPIKDSAQLERALRLSEEV-------NPLNLREARVTEVKQVGMG 170
Query: 230 DRVCVDLCR----------------LFLVHSECLESNYIASRPFRVNA 261
DRVCVD LFLVHSE +ES + + R FRVNA
Sbjct: 171 DRVCVDTTSILSKGEGMLVGGSASFLFLVHSENIESPFTSPREFRVNA 218
>sp|A3CV31|DHQS_METMJ 3-dehydroquinate synthase OS=Methanoculleus marisnigri (strain ATCC
35101 / DSM 1498 / JR1) GN=Memar_1301 PE=3 SV=1
Length = 328
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 75/147 (51%), Gaps = 23/147 (15%)
Query: 136 IVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKA 195
+++ DW VIP EN+VA S + V A+ EA++ L LE+G GI+L +D
Sbjct: 79 VIVRTGDWTVIPLENLVAQ---SDRIVAAVGNA-DEAKVALTVLERGTAGILLATDDPAE 134
Query: 196 VLALKEYFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCRLF--------------- 240
V + + G + L+ VTR+ GMGDRVCVD C +
Sbjct: 135 VRRVAKTIAG---AGASVPLVPFEVTRIVPVGMGDRVCVDTCSILADGEGMLVGNTSSAF 191
Query: 241 -LVHSECLESNYIASRPFRVNAVSFNA 266
+VH E LE+ Y+A RPFRVNA + +A
Sbjct: 192 LMVHPETLENPYVAPRPFRVNAGAVHA 218
>sp|A9A235|DHQS_NITMS 3-dehydroquinate synthase OS=Nitrosopumilus maritimus (strain SCM1)
GN=Nmar_0552 PE=3 SV=1
Length = 353
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 86/179 (48%), Gaps = 22/179 (12%)
Query: 109 RRVGSIIEVSTPQELQQ-LQPADGQAENIVIDLPDWQVIPAENIVASFQGSGKTVFAISK 167
++VG EV + +++ L A + +V+++ DW++IP ENI+A +FA+++
Sbjct: 72 KKVGRKFEVLSNTDIENILTIAKKGLDFVVVEVKDWKIIPLENIIAKLHKIHTKIFAVAR 131
Query: 168 TPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYFDGRNEVSNLLSLMKATVTRVDVAG 227
TP E + LE G+ G++ + V Y R+ + A + + G
Sbjct: 132 TPEEVRKMFSILEVGVDGVIFNTSSINEVREAMVYLGTRS-----FDMKPAKIIDIKEVG 186
Query: 228 MGDRVCVDLCR----------------LFLVHSECLESNYIASRPFRVNAVSFNALSFA 270
G+RVCVD LFLVH+E + S++ + RPFRVNA + + + +
Sbjct: 187 DGERVCVDTASMLHKGEGMLIGSRSNFLFLVHNESVGSSFTSPRPFRVNAGAVHCYTLS 245
>sp|Q8PXE8|DHQS_METMA 3-dehydroquinate synthase OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=MM_1272 PE=3 SV=1
Length = 380
Score = 81.3 bits (199), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 76/143 (53%), Gaps = 22/143 (15%)
Query: 142 DWQVIPAENIVASFQGSG-KTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALK 200
DW+VIP EN++A Q K +F + K+ EA++ + LE G G++L D +K
Sbjct: 133 DWKVIPLENLIADLQREKVKIIFGV-KSAEEARLAFQTLETGADGVLL---DSGNPQEIK 188
Query: 201 EYFD-GRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCRL----------------FLVH 243
+ R S L A VTRV+ GMGDRVCVD C L FLV+
Sbjct: 189 DTIKAARELESESTELESAVVTRVEPLGMGDRVCVDTCNLMQRGEGMLIGSQASGMFLVN 248
Query: 244 SECLESNYIASRPFRVNAVSFNA 266
SE +S Y+A+RPFRVNA + ++
Sbjct: 249 SESDDSPYVAARPFRVNAGAVHS 271
>sp|Q8THC5|DHQS_METAC 3-dehydroquinate synthase OS=Methanosarcina acetivorans (strain
ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=MA_4592 PE=3
SV=1
Length = 380
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 76/143 (53%), Gaps = 22/143 (15%)
Query: 142 DWQVIPAENIVASFQGSG-KTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALK 200
DW+VIP EN++A Q K +F + K+ EA++ + LE G G++L D +K
Sbjct: 133 DWKVIPLENLIADLQHQKVKIIFGV-KSAEEARLAFQTLEAGADGVLL---DSGNPQEIK 188
Query: 201 EYFD-GRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCRL----------------FLVH 243
+ R S L A VTRV+ GMGDRVCVD C L FLV+
Sbjct: 189 DTIKAARELESESAELEAAVVTRVEPLGMGDRVCVDTCNLMQRGEGMLIGSQASGMFLVN 248
Query: 244 SECLESNYIASRPFRVNAVSFNA 266
SE +S Y+A+RPFRVNA + ++
Sbjct: 249 SESDDSPYVAARPFRVNAGAVHS 271
>sp|Q5V143|DHQS_HALMA 3-dehydroquinate synthase OS=Haloarcula marismortui (strain ATCC
43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=rrnAC1879
PE=3 SV=1
Length = 388
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 71/140 (50%), Gaps = 19/140 (13%)
Query: 143 WQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEY 202
WQ+IP EN++A G + A +T +A+ E LE G G++L ++V + E
Sbjct: 142 WQIIPLENLIARV-GEETDLIAGVRTAEDARTAYETLELGADGVLLDTDEVDEIRKTVEV 200
Query: 203 FDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVD---------------LCR-LFLVHSEC 246
D S L L A VT ++ G DRVC+D + R LF VH+E
Sbjct: 201 RDEMGRES--LDLEYAEVTAIEQTGSADRVCIDTGSLMEHDEGMLVGSMARGLFFVHAET 258
Query: 247 LESNYIASRPFRVNAVSFNA 266
ES Y+ASRPFRVNA + +A
Sbjct: 259 AESPYVASRPFRVNAGAVHA 278
>sp|Q9HSB6|DHQS_HALSA 3-dehydroquinate synthase OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=VNG_0310C PE=3 SV=1
Length = 387
Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 84/153 (54%), Gaps = 25/153 (16%)
Query: 133 AENIVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVED 192
A++ ++ DW +IP EN++A G T+ A ++ +EA+ E L+ G ++L +D
Sbjct: 131 ADHTIVVGDDWTIIPLENLIARI-GEETTLVAGVESAAEAETAFETLDIGADAVLLDSDD 189
Query: 193 ---VKAVLALKEYFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVD-------------- 235
++ +++++ D + L+L AT+T ++ AG DRVCVD
Sbjct: 190 PDEIRRTVSVRDAADREH-----LALSTATITTIEEAGSADRVCVDTGSLLADDEGMLVG 244
Query: 236 -LCR-LFLVHSECLESNYIASRPFRVNAVSFNA 266
+ R LF VH+E +S Y+A+RPFRVNA + +A
Sbjct: 245 SMSRGLFFVHAETAQSPYVAARPFRVNAGAVHA 277
>sp|B0R336|DHQS_HALS3 3-dehydroquinate synthase OS=Halobacterium salinarum (strain ATCC
29341 / DSM 671 / R1) GN=OE_1475F PE=3 SV=1
Length = 387
Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 84/153 (54%), Gaps = 25/153 (16%)
Query: 133 AENIVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVED 192
A++ ++ DW +IP EN++A G T+ A ++ +EA+ E L+ G ++L +D
Sbjct: 131 ADHTIVVGDDWTIIPLENLIARI-GEETTLVAGVESAAEAETAFETLDIGADAVLLDSDD 189
Query: 193 ---VKAVLALKEYFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVD-------------- 235
++ +++++ D + L+L AT+T ++ AG DRVCVD
Sbjct: 190 PDEIRRTVSVRDAADREH-----LALSTATITTIEEAGSADRVCVDTGSLLADDEGMLVG 244
Query: 236 -LCR-LFLVHSECLESNYIASRPFRVNAVSFNA 266
+ R LF VH+E +S Y+A+RPFRVNA + +A
Sbjct: 245 SMSRGLFFVHAETAQSPYVAARPFRVNAGAVHA 277
>sp|A0RU27|DHQS_CENSY 3-dehydroquinate synthase OS=Cenarchaeum symbiosum (strain A)
GN=CENSYa_0201 PE=3 SV=1
Length = 338
Score = 75.1 bits (183), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 92/191 (48%), Gaps = 28/191 (14%)
Query: 100 EGEVYDSGDRRVGSIIEVSTPQELQQ-LQPADGQAENIVIDLPDWQVIPAENIVASFQGS 158
EG ++VG ++ + +++ LQ A + ++ ++ DW++IP EN++A
Sbjct: 48 EGRAAKPRGKKVGRRFKILSNKDIDGVLQEAQKGLDFVITEVQDWKIIPLENMIAKLHKI 107
Query: 159 GKTVFAISKTPSEAQIFLEALEQGLGGIVL---KVEDVKAVLALKEYFDGRNEVSNLLSL 215
++A++++P+E + L+ G+ G++ V DV+ L + + L
Sbjct: 108 HTRLYAVARSPAEVRKMFSILDVGVDGVIFTASTVGDVREALV--------HLGTKSFRL 159
Query: 216 MKATVTRVDVAGMGDRVCVDLCR----------------LFLVHSECLESNYIASRPFRV 259
A +T + G G+RVCVD +FLVH+E + S++ + RPFRV
Sbjct: 160 QPARITEIREVGDGERVCVDTASMLERGEGMLVGSRSNFMFLVHNESVGSSFTSPRPFRV 219
Query: 260 NAVSFNALSFA 270
NA + ++ +
Sbjct: 220 NAGAVHSYTLG 230
>sp|A0JC76|GRIH_STRGR 3-amino-4-hydroxybenzoic acid synthase OS=Streptomyces griseus
GN=griH PE=1 SV=1
Length = 396
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 63/145 (43%), Gaps = 19/145 (13%)
Query: 142 DWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKE 201
D IP E ++A+ + ++ I++ EA+I LE G G+++ + V LK
Sbjct: 148 DPTKIPLEIVIAAAARASGSMVTIAQDLEEAEILFGVLEHGSDGVMMAPKTVGDAAELKR 207
Query: 202 YFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCRLF----------------LVHSE 245
+ + N L+L + V GMG+R CVD F L SE
Sbjct: 208 IAEAG--IPN-LNLTELRVVETSHIGMGERACVDTTTHFGEDEGILVGSHSKGMILCVSE 264
Query: 246 CLESNYIASRPFRVNAVSFNALSFA 270
Y+ +RPFRVNA + ++ +
Sbjct: 265 THPLPYMPTRPFRVNAGAIHSYTLG 289
>sp|B1VTI7|GRIH_STRGG 3-amino-4-hydroxybenzoic acid synthase OS=Streptomyces griseus
subsp. griseus (strain JCM 4626 / NBRC 13350) GN=griH
PE=3 SV=1
Length = 396
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 63/145 (43%), Gaps = 19/145 (13%)
Query: 142 DWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKE 201
D IP E ++A+ + ++ I++ EA+I LE G G+++ + V LK
Sbjct: 148 DPTKIPLEIVIAAAARASGSMVTIAQDLEEAEILFGVLEHGSDGVMMAPKTVGDAAELKR 207
Query: 202 YFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCRLF----------------LVHSE 245
+ + N L+L + V GMG+R CVD F L SE
Sbjct: 208 IAEAG--IPN-LNLTELRVVETSHIGMGERACVDTTTHFGEDEGILVGSHSKGMILCVSE 264
Query: 246 CLESNYIASRPFRVNAVSFNALSFA 270
Y+ +RPFRVNA + ++ +
Sbjct: 265 THPLPYMPTRPFRVNAGAIHSYTLG 289
>sp|Q5Q995|KTAP2_IXOSC Protein KRTCAP2 homolog OS=Ixodes scapularis PE=2 SV=1
Length = 135
Score = 33.1 bits (74), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 178 ALEQGLGGIVLKVEDVKAVLALKEYFDGRNEVSNLL-SLMKATVTRVDVAGMGDRVCVDL 236
A+ G G VL + + A+ + +F GRN + L+ ++ A V + +GM RVC+
Sbjct: 37 AIVGGFLGSVLFILILTAISNFETHFFGRNFQTKLIPEVVIALVIAMAASGMVHRVCITT 96
Query: 237 CRLF 240
C +F
Sbjct: 97 CLIF 100
>sp|B0TM50|MTNC_SHEHH Enolase-phosphatase E1 OS=Shewanella halifaxensis (strain HAW-EB4)
GN=mtnC PE=3 SV=1
Length = 225
Score = 32.7 bits (73), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Query: 5 LSSSFVSSTQLPFSTFN----TDKWNTG---RVNKNSYCFTMCSVSNSSSSKPKRVWIWT 57
SS V + +L FS + DK+N R + C++ N+ S PK++ +
Sbjct: 125 FSSGSVEAQKLLFSHSDAGDLNDKFNGHFDTRTGNKRFKQAYCNIVNTISLSPKQILFVS 184
Query: 58 ESKQVMTAAVERGWNTFVFLSENQQLAIDWSTIA 91
+ + + AA E G N + ++ Q D+ TI+
Sbjct: 185 DVLEELKAASEAGLNVVQMVRDDSQRTGDFKTIS 218
>sp|P02640|VILI_CHICK Villin-1 OS=Gallus gallus GN=VIL1 PE=1 SV=2
Length = 826
Score = 32.0 bits (71), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 22/109 (20%)
Query: 60 KQVMTAAVERGWNTF----VFLSENQQLAIDWS-----------TIALLDPLFIKEGEVY 104
K V+ A VE W +F VFL + QL I W+ + L + +E
Sbjct: 146 KNVVAAEVEMSWKSFNLGDVFLLDLGQLIIQWNGPESNRAERLRAMTLAKDIRDRE---- 201
Query: 105 DSGDRRVGSII---EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAEN 150
+G +VG + E ++P+ +Q L G+ +NI PD QV A N
Sbjct: 202 RAGRAKVGVVEGENEAASPELMQALTHVLGEKKNIKAATPDEQVHQALN 250
>sp|Q0AZF4|EX7L_SYNWW Exodeoxyribonuclease 7 large subunit OS=Syntrophomonas wolfei
subsp. wolfei (strain Goettingen) GN=xseA PE=3 SV=1
Length = 405
Score = 31.6 bits (70), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 173 QIFLEALE-QGLGGIVLKVEDVKAVLALKEYFDGRNEVSNLLSLMKATVTRVDVAGMGDR 231
Q+++E ++ G+GG+ L +E++K LA K YF + + + A V RV + D
Sbjct: 94 QLYVEEMQPYGIGGLFLYLEELKKKLAAKGYFAPERKKA-----IPAFVQRVGIVTSQDG 148
Query: 232 VCV-DLCRLF 240
+ D+CR+
Sbjct: 149 AALRDICRIL 158
>sp|Q8K4J0|DCR1C_MOUSE Protein artemis OS=Mus musculus GN=Dclre1c PE=2 SV=2
Length = 705
Score = 31.2 bits (69), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 30/125 (24%)
Query: 115 IEVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVAS----FQGSGKTV-----FAI 165
IE+ TP ++ + A G+ E +V+ L +PA + S FQGS TV F +
Sbjct: 85 IEIETPTQISLVDEASGEKEEVVVTL-----LPAGHCPGSVMFLFQGSNGTVLYTGDFRL 139
Query: 166 SKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYFDGR--------NEVSNLLSLMK 217
+K + L + GG +V+D+++V + D R + +L L++
Sbjct: 140 AKGEASRMELLHS-----GG---RVKDIQSVYLDTTFCDPRFYQIPSREQCLRGILELVR 191
Query: 218 ATVTR 222
+ VTR
Sbjct: 192 SWVTR 196
>sp|A7HPP1|KDSB_PARL1 3-deoxy-manno-octulosonate cytidylyltransferase OS=Parvibaculum
lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966)
GN=kdsB PE=3 SV=1
Length = 258
Score = 31.2 bits (69), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 14/93 (15%)
Query: 145 VIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYFD 204
VIPA +AS + GK + I TP Q++ A+E G+G +V+ + KE D
Sbjct: 19 VIPAR--MASTRLPGKPLADICGTPMIVQVWRRAMEAGVGRVVVAAAE-------KEIAD 69
Query: 205 GRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLC 237
E +A +T D+ DRV +C
Sbjct: 70 AVREAGG-----EAVLTDPDLPSGSDRVWQAVC 97
>sp|B0T7V9|ISPE_CAUSK 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase OS=Caulobacter
sp. (strain K31) GN=ispE PE=3 SV=1
Length = 293
Score = 30.8 bits (68), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 7/56 (12%)
Query: 126 LQPADGQAENIVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQ 181
L+P GQ +++ D P E ++A GSG T FA+ EA+ E +EQ
Sbjct: 229 LEPRIGQVLDLLADEP-------ETLLARMSGSGATCFALCAGDIEAEGLAERIEQ 277
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.131 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,806,206
Number of Sequences: 539616
Number of extensions: 3688423
Number of successful extensions: 9463
Number of sequences better than 100.0: 48
Number of HSP's better than 100.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 9348
Number of HSP's gapped (non-prelim): 53
length of query: 270
length of database: 191,569,459
effective HSP length: 116
effective length of query: 154
effective length of database: 128,974,003
effective search space: 19861996462
effective search space used: 19861996462
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)