RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= 024252
(270 letters)
>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine
synthase) {Thale cress (Arabidopsis thaliana) [TaxId:
3702]}
Length = 320
Score = 249 bits (637), Expect = 6e-83
Identities = 218/269 (81%), Positives = 248/269 (92%)
Query: 1 MIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAF 60
MI+DAE+KGLI+PGESVLIEPTSGNTG+GLAF AAAKGY+LIITMPASMS ERR++LLAF
Sbjct: 51 MISDAEKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAF 110
Query: 61 GAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFENPANPKIHYETTGPEIWKGTGGK 120
G ELVLTDPA+GMKGA+ KAEEI KTPN Y+LQQFENPANPKIHYETTGPEIWKGTGGK
Sbjct: 111 GVELVLTDPAKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGK 170
Query: 121 IDALVSGIGTGGTVTGAGKYLKEHNPEIKLYGVEPVESAVLSGGKPGPHKIQGIGAGFIP 180
ID VSGIGTGGT+TGAGKYLKE N +KLYGVEPVESA+LSGGKPGPHKIQGIGAGFIP
Sbjct: 171 IDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEPVESAILSGGKPGPHKIQGIGAGFIP 230
Query: 181 GVLDVNLLDETVQISSEEAIETAKLLALKEGLLVGISSGAATAAAIQIAKRPENAGKLIV 240
VL+V+L+DE VQ+SS+E+I+ A+ LALKEGLLVGISSGAA AAAI++A+RPENAGKL V
Sbjct: 231 SVLNVDLIDEVVQVSSDESIDMARQLALKEGLLVGISSGAAAAAAIKLAQRPENAGKLFV 290
Query: 241 VVFPSFGERYLSSVLFESVKKEAESMVFE 269
+FPSFGERYLS+VLF++ +KEAE+M FE
Sbjct: 291 AIFPSFGERYLSTVLFDATRKEAEAMTFE 319
>d1o58a_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine
synthase) {Thermotoga maritima [TaxId: 2336]}
Length = 293
Score = 221 bits (565), Expect = 2e-72
Identities = 135/255 (52%), Positives = 179/255 (70%), Gaps = 6/255 (2%)
Query: 1 MIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAF 60
MI DAE++GL++ G ++EPTSGN GI +A + A +G+R+I+TMP +MS+ERR VL
Sbjct: 44 MILDAEKRGLLKNG---IVEPTSGNMGIAIAMIGAKRGHRVILTMPETMSVERRKVLKML 100
Query: 61 GAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFENPANPKIHYETTGPEIWKGTGGK 120
GAELVLT GMKGAV+KA EI +T +++L QFENP N H TTGPEI K +
Sbjct: 101 GAELVLTPGELGMKGAVEKALEISRET-GAHMLNQFENPYNVYSHQFTTGPEILKQMDYQ 159
Query: 121 IDALVSGIGTGGTVTGAGKYLKEHNPE-IKLYGVEPVESAVLSGGKPGPHKIQGIGAGFI 179
IDA V+G+GTGGT++G G+ LK +K+ VEP +S VLSGG+PG H IQGIGAGF+
Sbjct: 160 IDAFVAGVGTGGTISGVGRVLKGFFGNGVKIVAVEPAKSPVLSGGQPGKHAIQGIGAGFV 219
Query: 180 PGVLDVNLLDETVQISSEEAIETAKLLALKEGLLVGISSGAATAAAIQIAKRPENAGKLI 239
P +LD +++DE + + EEA E A+ LA KEGLLVGISSGA AAA+++A++ +
Sbjct: 220 PKILDRSVIDEVITVEDEEAYEMARYLAKKEGLLVGISSGANVAAALKVAQKLG-PDARV 278
Query: 240 VVVFPSFGERYLSSV 254
V V P ERYLS +
Sbjct: 279 VTVAPDHAERYLSIL 293
>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine
synthase) {Haemophilus influenzae [TaxId: 727]}
Length = 310
Score = 205 bits (522), Expect = 1e-65
Identities = 143/264 (54%), Positives = 188/264 (71%), Gaps = 9/264 (3%)
Query: 1 MIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAF 60
M+ AE+ G + G +++ TSGNTGI LA++AAA+GY++ +TMP +MSLER+ +L
Sbjct: 48 MVWQAEKDGTLTKG-KEIVDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGL 106
Query: 61 GAELVLTDPARGMKGAVQKAEEIRDKTPNSYV-LQQFENPANPKIHYETTGPEIWKGTGG 119
G LVLT+ A+GMKGA+ KAEEI P+ YV L+QFENPANP+IH ETTGPEIWK T G
Sbjct: 107 GVNLVLTEGAKGMKGAIAKAEEIVASDPSRYVMLKQFENPANPQIHRETTGPEIWKDTDG 166
Query: 120 KIDALVSGIGTGGTVTGAGKYLKE-HNPEIKLYGVEPVESAVLSGGKPG------PHKIQ 172
K+D +V+G+GTGG++TG + +K +I VEPVES V+S G PHKIQ
Sbjct: 167 KVDVVVAGVGTGGSITGISRAIKLDFGKQITSVAVEPVESPVISQTLAGEEVKPGPHKIQ 226
Query: 173 GIGAGFIPGVLDVNLLDETVQISSEEAIETAKLLALKEGLLVGISSGAATAAAIQIAKRP 232
GIGAGFIP LD++++D + S+ A+ TA+ L +EG+L GISSGAA AAA ++AK P
Sbjct: 227 GIGAGFIPKNLDLSIIDRVETVDSDTALATARRLMAEEGILAGISSGAAVAAADRLAKLP 286
Query: 233 ENAGKLIVVVFPSFGERYLSSVLF 256
E A KLIVV+ PS ERYLS+ LF
Sbjct: 287 EFADKLIVVILPSASERYLSTALF 310
>d1ve1a1 c.79.1.1 (A:1-302) O-acetylserine sulfhydrylase (Cysteine
synthase) {Thermus thermophilus [TaxId: 274]}
Length = 302
Score = 199 bits (506), Expect = 2e-63
Identities = 138/257 (53%), Positives = 185/257 (71%), Gaps = 3/257 (1%)
Query: 1 MIADAEEKGLIRPG-ESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLA 59
MI DAEE+G++RPG V++EPTSGNTGIGLA +AA++GYRLI+TMPA MS ER+ VL A
Sbjct: 47 MIKDAEERGILRPGSGQVIVEPTSGNTGIGLAMIAASRGYRLILTMPAQMSEERKRVLKA 106
Query: 60 FGAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFENPANPKIHYETTGPEIWKGTGG 119
FGAELVLTDP R M A ++A ++++ +++ QF+NPAN + HYETTGPE+++ G
Sbjct: 107 FGAELVLTDPERRMLAAREEALRLKEE-LGAFMPDQFKNPANVRAHYETTGPELYEALEG 165
Query: 120 KIDALVSGIGTGGTVTGAGKYLKEHNPEIKLYGVEPVESAVLSGGKPGPHKIQGIGAGFI 179
+IDA V G GTGGT+TG G+YLKE P +K+ VEP S VLSGGK G H QG+G GFI
Sbjct: 166 RIDAFVYGSGTGGTITGVGRYLKERIPHVKVIAVEPARSNVLSGGKMGQHGFQGMGPGFI 225
Query: 180 PGVLDVNLLDETVQISSEEAIETAKLLALKEGLLVGISSGAATAAAIQIAKRPENAGKLI 239
P LD++LLD +Q+ E+A A+ LA +EGL +G+SSG AA+Q+A+ GK +
Sbjct: 226 PENLDLSLLDGVIQVWEEDAFPLARRLAREEGLFLGMSSGGIVWAALQVARE-LGPGKRV 284
Query: 240 VVVFPSFGERYLSSVLF 256
+ P G +YLS+ L+
Sbjct: 285 ACISPDGGWKYLSTPLY 301
>d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine
synthase) {Salmonella typhimurium [TaxId: 90371]}
Length = 302
Score = 187 bits (476), Expect = 6e-59
Identities = 140/256 (54%), Positives = 188/256 (73%), Gaps = 10/256 (3%)
Query: 1 MIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAF 60
MI DAE++G+++PG L+EPT+GNTGI LA++AAA+GY+L +TMP +MS+ERR +L A
Sbjct: 48 MIWDAEKRGVLKPGV-ELVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKAL 106
Query: 61 GAELVLTDPARGMKGAVQKAEEIRDKTPNS-YVLQQFENPANPKIHYETTGPEIWKGTGG 119
GA LVLT+ A+GMKGA+QKAEEI P +LQQF NPANP+IH +TTGPEIW+ T G
Sbjct: 107 GANLVLTEGAKGMKGAIQKAEEIVASDPQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDG 166
Query: 120 KIDALVSGIGTGGTVTGAGKYLK--EHNPEIKLYGVEPVESAVLSGGK------PGPHKI 171
++D +SG+GTGGT+TG +Y+K + ++ VEP +S V++ PGPHKI
Sbjct: 167 QVDVFISGVGTGGTLTGVTRYIKGTKGKTDLITVAVEPTDSPVIAQALAGEEIKPGPHKI 226
Query: 172 QGIGAGFIPGVLDVNLLDETVQISSEEAIETAKLLALKEGLLVGISSGAATAAAIQIAKR 231
QGIGAGFIPG LD+ L+D+ V I++EEAI TA+ L +EG+L GISSGAA AAA+++ +
Sbjct: 227 QGIGAGFIPGNLDLKLIDKVVGITNEEAISTARRLMEEEGILAGISSGAAVAAALKLQED 286
Query: 232 PENAGKLIVVVFPSFG 247
K IVV+ PS G
Sbjct: 287 ESFTNKNIVVILPSSG 302
>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 355
Score = 189 bits (480), Expect = 6e-59
Identities = 107/265 (40%), Positives = 157/265 (59%), Gaps = 10/265 (3%)
Query: 1 MIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAF 60
MI DAE G ++P +IEPTSGNTGIGLA AA +GYR II MP MS E+ VL A
Sbjct: 84 MIEDAERDGTLKP-GDTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRAL 142
Query: 61 GAELVLTDPARGM---KGAVQKAEEIRDKTPNSYVLQQFENPANPKIHYETTGPEIWKGT 117
GAE+V T + V A ++++ PNS++L Q+ N +NP HY+TT EI +
Sbjct: 143 GAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHYDTTADEILQQC 202
Query: 118 GGKIDALVSGIGTGGTVTGAGKYLKEHNPEIKLYGVEPVESAVLSGGK-----PGPHKIQ 172
GK+D LV+ +GTGGT+TG + LKE P ++ GV+P S + + ++++
Sbjct: 203 DGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDPEGSILAEPEELNQTEQTTYEVE 262
Query: 173 GIGAGFIPGVLDVNLLDETVQISSEEAIETAKLLALKEGLLVGISSGAATAAAIQIAKRP 232
GIG FIP VLD ++D+ + + EEA A++L +EGLL G S+G+ A A++ A+
Sbjct: 263 GIGYDFIPTVLDRTVVDKWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTVAVAVKAAQEL 322
Query: 233 ENAGKLIVVVFPSFGERYLSSVLFE 257
+ G+ VV+ P Y++ L +
Sbjct: 323 Q-EGQRCVVILPDSVRNYMTKFLSD 346
>d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine
synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]}
Length = 382
Score = 172 bits (437), Expect = 3e-52
Identities = 63/257 (24%), Positives = 115/257 (44%), Gaps = 15/257 (5%)
Query: 1 MIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAF 60
+I+ + + G S++ + TS N G+ L+ +A GYR + +P + +++
Sbjct: 133 IISRLSRR--VEKG-SLVADATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPRLL 189
Query: 61 GAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFENPANPKIHYETTGPEIWK---GT 117
GA++++ A + + K + QF N AN + H T EI+
Sbjct: 190 GAQVIVDPEAPSTVHLLPR-VMKDSKNEGFVHVNQFYNDANFEAHMRGTAREIFVQSRRG 248
Query: 118 GGKIDALVSGIGTGGTVTGAGKYLKEHNPEIKLYGVEPVESAVLSGGKPGPHKIQGIGAG 177
G + + +GT G ++ A YL+ +P I+ V+P + + G + +
Sbjct: 249 GLALRGVAGSLGTSGHMSAAAFYLQSVDPSIRAVLVQPAQGDSIPGIRRVETGM------ 302
Query: 178 FIPGVLDVNLLDETVQISSEEAIETAKLLALKEGLLVGISSGAATAAAIQIAKRPENAGK 237
+LD++ +++ EEA+E +A +GL++G S GAA A + A +
Sbjct: 303 LWINMLDIS--YTLAEVTLEEAMEAVVEVARSDGLVIGPSGGAAVKALAKKAAEGDLEPG 360
Query: 238 LIVVVFPSFGERYLSSV 254
VVV P G +YLS V
Sbjct: 361 DYVVVVPDTGFKYLSLV 377
>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine
synthase) {Escherichia coli, isoform B (CysM) [TaxId:
562]}
Length = 292
Score = 165 bits (418), Expect = 2e-50
Identities = 105/256 (41%), Positives = 160/256 (62%), Gaps = 11/256 (4%)
Query: 1 MIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAF 60
MI +AE++G I+PG+ + IE TSGNTGI LA +AA KGYR+ + MP +MS ERR + A+
Sbjct: 47 MIVEAEKRGEIKPGDVL-IEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAY 105
Query: 61 GAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFENPANPKIHYETTGPEIWKGTGGK 120
GAEL+L +GM+GA + +L QF NP NP HY TTGPEIW+ TGG+
Sbjct: 106 GAELILVTKEQGMEGA-RDLALEMANRGEGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGR 164
Query: 121 IDALVSGIGTGGTVTGAGKYLKEHNPEIKLYGVEPVESAVLSGGKPGPHKIQGIGAGFIP 180
I VS +GT GT+TG ++++E + + + G++P E + + G + P ++P
Sbjct: 165 ITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQPEEGSSIPGIRRWPT-------EYLP 217
Query: 181 GVLDVNLLDETVQISSEEAIETAKLLALKEGLLVGISSGAATAAAIQIAKRPENAGKLIV 240
G+ + +L+DE + I +A T + LA++EG+ G+SSG A A A+++AK N ++V
Sbjct: 218 GIFNASLVDEVLDIHQRDAENTMRELAVREGIFCGVSSGGAVAGALRVAK--ANPDAVVV 275
Query: 241 VVFPSFGERYLSSVLF 256
+ G+RYLS+ +F
Sbjct: 276 AIICDRGDRYLSTGVF 291
>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli
[TaxId: 562]}
Length = 331
Score = 116 bits (290), Expect = 3e-31
Identities = 54/269 (20%), Positives = 94/269 (34%), Gaps = 26/269 (9%)
Query: 1 MIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAF 60
M+A E+ +I ++GN G+AF +A G + +I MP + + + + F
Sbjct: 65 MMAGLTEEQKAHG----VITASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVRGF 120
Query: 61 GAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFENPANPKIHYETTGPEIWKGTGGK 120
G E++L A + + F++P I + T
Sbjct: 121 GGEVLLHGANFDEAKAKAIELSQQ---QGFTWVPPFDHP--MVIAGQGTLALELLQQDAH 175
Query: 121 IDALVSGIGTGGTVTGAGKYLKEHNPEIKLYGVEPVESAVLSGGKPGPHKIQ-------- 172
+D + +G GG G +K+ P+IK+ VE +SA L H +
Sbjct: 176 LDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVEAEDSACLKAALDAGHPVDLPRVGLFA 235
Query: 173 -GIGAGFIPGV---LDVNLLDETVQISSEEAIETAKLLALKEGLLVGISSGAATAAAIQI 228
G+ I L LD+ + + S+ K L + S A A +
Sbjct: 236 EGVAVKRIGDETFRLCQEYLDDIITVDSDAICAAMKDLFEDVRAVAEPSGALALAGMKKY 295
Query: 229 AKRPENAGKLIVVVFP-----SFGERYLS 252
G+ + + G RY+S
Sbjct: 296 IALHNIRGERLAHILSGANVNFHGLRYVS 324
>d1tyza_ c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate deaminase
{Pseudomonas sp., strain ACP [TaxId: 306]}
Length = 338
Score = 104 bits (259), Expect = 1e-26
Identities = 43/266 (16%), Positives = 77/266 (28%), Gaps = 27/266 (10%)
Query: 1 MIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERR------ 54
+I +A +G V I N +A +AA G + ++ ++
Sbjct: 58 LIPEALAQGCDTL---VSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVG 114
Query: 55 ----MVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFENPANPKIHYETTG 110
+L LV G + + + A E +P G
Sbjct: 115 NIQMSRILGADVRLVPDGFDIGFRRSWEDALESVRAAGGKPYAIPAGCSDHPLGGLGFVG 174
Query: 111 PEIW-----KGTGGKIDALVSGIGTGGTVTGAGKYLKEHNPEIKLYGVEPVESAVLSGGK 165
G K D +V TG T G ++ GV+ + +
Sbjct: 175 FAEEVRAQEAELGFKFDYVVVCSVTGSTQAGMVVGFAADGRADRVIGVDASAKPAQTREQ 234
Query: 166 PGPHKIQGIGAGFIPG-------VLDVNLLDETVQISSEEAIETAKLLALKEGLLVG-IS 217
Q + VLD + +E +E +L A EG+L +
Sbjct: 235 ITRIARQTAEKVGLERDIMRADVVLDERFAGPEYGLPNEGTLEAIRLCARTEGMLTDPVY 294
Query: 218 SGAATAAAIQIAKRPE-NAGKLIVVV 242
G + I++ + E G ++
Sbjct: 295 EGKSMHGMIEMVRNGEFPEGSRVLYA 320
>d1v8za1 c.79.1.1 (A:1-386) Tryptophan synthase, beta-subunit
{Archaeon Pyrococcus furiosus [TaxId: 2261]}
Length = 386
Score = 102 bits (255), Expect = 7e-26
Identities = 56/283 (19%), Positives = 101/283 (35%), Gaps = 45/283 (15%)
Query: 17 VLIEPTSGNTGIGLAFMAAAKGYRLIITMPA---SMSLERRMVLLAFGAELVLTDP-ARG 72
++ E +G G+ A A G ++ I M A + GA ++ + +R
Sbjct: 101 LIAETGAGQHGVATAMAGALLGMKVDIYMGAEDVERQKMNVFRMKLLGANVIPVNSGSRT 160
Query: 73 MKGAVQKAEEIRDKTP------NSYVLQQFENPANPKIHYETTGPEI---WKGTGGKIDA 123
+K A+ +A T V+ P + G E G++
Sbjct: 161 LKDAINEALRDWVATFEYTHYLIGSVVGPHPYPTIVRDFQSVIGREAKAQILEAEGQLPD 220
Query: 124 LVSGIGTGGTVTGAGKYLKEHNPEIKLYGVEPVESAVLSG--------GKPGP------- 168
++ GG+ Y ++ ++KL GVE + SG G+ G
Sbjct: 221 VIVACVGGGSNAMGIFYPFVNDKKVKLVGVEAGGKGLESGKHSASLNAGQVGVFHGMLSY 280
Query: 169 ----------------HKIQGIGAGFIPGVLDVNLLDETVQISSEEAIETAKLLALKEGL 212
+ G G L E V ++ EEA++ L+ EG+
Sbjct: 281 FLQDEEGQIKPTHSIAPGLDYPGVGPEHAYLKKIQRAEYVTVTDEEALKAFHELSRTEGI 340
Query: 213 LVGISSGAATAAAIQIAKRPENAGKLIVVVFPSFGERYLSSVL 255
+ + S A A A+++AK + ++I+V G++ L VL
Sbjct: 341 IPALESAHAVAYAMKLAKE-MSRDEIIIVNLSGRGDKDLDIVL 382
>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14
(SPCC320.14, SPCC330.15c) {Fission yeast
(Schizosaccharomyces pombe) [TaxId: 4896]}
Length = 318
Score = 95.0 bits (235), Expect = 2e-23
Identities = 47/235 (20%), Positives = 95/235 (40%), Gaps = 19/235 (8%)
Query: 20 EPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQK 79
+SGN +A A G I MP + +G ++++ D + + +
Sbjct: 74 TFSSGNHAQAIALSAKILGIPAKIIMPLDAPEAKVAATKGYGGQVIMYDRYKDDR--EKM 131
Query: 80 AEEIRDKTPNSYVLQQFENPANPKIHYETTGPEIWKGTGGKIDALVSGIGTGGTVTGAGK 139
A+EI ++ + + +++P + T E+++ G +DAL +G GG ++G+
Sbjct: 132 AKEISEREGLTII-PPYDHP-HVLAGQGTAAKELFE-EVGPLDALFVCLGGGGLLSGSAL 188
Query: 140 YLKEHNPEIKLYGVEPVESAVLS------------GGKPGPHKIQGIGAGFIPGVLDVNL 187
+ P ++YGVEP K Q G +
Sbjct: 189 AARHFAPNCEVYGVEPEAGNDGQQSFRKGSIVHIDTPKTIADGAQTQHLGNYTFSIIKEK 248
Query: 188 LDETVQISSEEAIETAKLLALKEGLLVGISSGAATAAAIQIAKRPENAGKLIVVV 242
+D+ + +S EE I+ K A + ++V + + AAA + ++ + K I ++
Sbjct: 249 VDDILTVSDEELIDCLKFYAARMKIVVEPTGCLSFAAARAMKEKLK--NKRIGII 301
>d1ve5a1 c.79.1.1 (A:2-311) Threonine deaminase {Thermus
thermophilus [TaxId: 274]}
Length = 310
Score = 89.3 bits (220), Expect = 2e-21
Identities = 42/239 (17%), Positives = 91/239 (38%), Gaps = 21/239 (8%)
Query: 19 IEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQ 78
+ +SGN G+A+ A G + ++ MP S ++ A+GAE+V + V
Sbjct: 68 LAVSSGNHAQGVAYAAQVLGVKALVVMPEDASPYKKACARAYGAEVVDRGVTAKNREEVA 127
Query: 79 KAEEIRDKTPNSYVLQQFENPANPKIHYETTGPEIW--KGTGGKIDALVSGIGTGGTVTG 136
+A + ++ F++P + G A+++ +G GG + G
Sbjct: 128 RA---LQEETGYALIHPFDDPLVIAGQGTAGLELLAQAGRMGVFPGAVLAPVGGGGLLAG 184
Query: 137 AGKYLKEHNPEIKLYGVEPVESA-------------VLSGGKPGPHKIQGIGAGFIPGVL 183
+K +P + GVEP + + + + ++ + G +
Sbjct: 185 LATAVKALSPTTLVLGVEPEAADDAKRSLEAGRILRLEAPPRTRADGVRTLSLGERTFPI 244
Query: 184 DVNLLDETVQISSEEAIETAKLLALKEGLLVGISSGAATAAAIQIAKRPENAGKLIVVV 242
+D + +S E +E +LL + +V + AA ++ R + + ++
Sbjct: 245 LRERVDGILTVSEEALLEAERLLFTRTKQVVEPTGALPLAAVLEHGARL---PQTLALL 300
>d1j0aa_ c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate deaminase
{Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Length = 325
Score = 89.4 bits (220), Expect = 2e-21
Identities = 44/252 (17%), Positives = 88/252 (34%), Gaps = 16/252 (6%)
Query: 1 MIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAF 60
++ DA KG + + N A G I+ + L+ +L
Sbjct: 61 LLGDALSKGADVV---ITVGAVHSNHAFVTGLAAKKLGLDAILVLRGKEELKGNYLLDKI 117
Query: 61 GAELVLTDPARGMKGAVQKAEEIRD----KTPNSYVLQQFENPANPKIHYETTGPEIWKG 116
A+ ++ AEEI + + YV+ + Y EI
Sbjct: 118 MGIETRVYDAKDSFELMKYAEEIAEELKREGRKPYVIPPGGASPIGTLGYVRAVGEIATQ 177
Query: 117 TGGKIDALVSGIGTGGTVTGAGKYLKEHNPEIKLYGVEPVESA-----VLSGGKPGPHKI 171
+ K D++V G+GGT+ G L N +I+ G+ L ++
Sbjct: 178 SEVKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGIAVGRFGEVMTSKLDNLIKEAAEL 237
Query: 172 QGIGAGFIPGVLDVNLLDETVQISSEEAIETAKLLALKEGLLVG-ISSGAATAAAIQIAK 230
G+ P + + E + + + +EG+++ + +G A + +A+
Sbjct: 238 LGVKVEVRP--ELYDYSFGEYGKITGEVAQIIRKVGTREGIILDPVYTGKAFYGLVDLAR 295
Query: 231 RPENAGKLIVVV 242
+ E G+ I+ +
Sbjct: 296 KGE-LGEKILFI 306
>d1f2da_ c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate deaminase
{Yeast (Hansenula saturnus) [TaxId: 4906]}
Length = 341
Score = 89.0 bits (219), Expect = 3e-21
Identities = 37/267 (13%), Positives = 73/267 (27%), Gaps = 28/267 (10%)
Query: 1 MIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAF 60
++ D E V I N +A +AA G + ++ + + +
Sbjct: 58 IVPDIVEGDYTHL---VSIGGRQSNQTRMVAALAAKLGKKCVLIQEDWVPIPEAEKDVYN 114
Query: 61 GAELVLTDPARGMKG---------------AVQKAEEIRDKTPNSYVLQQFENPANPKIH 105
+ G A E + +
Sbjct: 115 RVGNIELSRIMGADVRVIEDGFDIGMRKSFANALQELEDAGHKPYPIPAGCSEHKYGGLG 174
Query: 106 Y---ETTGPEIWKGTGGKIDALVSGIGTGGTVTGAGKYLKEHNPEIKLYGVEPVESA--- 159
+ G K D +V TG T G + ++ + + ++ ++
Sbjct: 175 FVGFADEVINQEVELGIKFDKIVVCCVTGSTTAGILAGMAQYGRQDDVIAIDASFTSEKT 234
Query: 160 --VLSGGKPGPHKIQGIGAGFIPGVLDVNLLDETVQISSEEAIETAKLLALKEGLLVG-I 216
K+ G+ F LD + +E IE + A +EG+L +
Sbjct: 235 KEQTLRIANNTAKLIGVEHEFKDFTLDTRFAYPCYGVPNEGTIEAIRTCAEQEGVLTDPV 294
Query: 217 SSGAATAAAIQIAKRPE-NAGKLIVVV 242
G + I + K G ++ V
Sbjct: 295 YEGKSMQGLIALIKEDYFKPGANVLYV 321
>d1qopb_ c.79.1.1 (B:) Tryptophan synthase, beta-subunit {Salmonella
typhimurium [TaxId: 90371]}
Length = 390
Score = 81.4 bits (200), Expect = 3e-18
Identities = 54/288 (18%), Positives = 88/288 (30%), Gaps = 52/288 (18%)
Query: 1 MIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASM---SLERRMVL 57
A+ G E +G G+ A +A G + I M A +
Sbjct: 93 QALLAKRMGKSEII----AETGAGQHGVASALASALLGLKCRIYMGAKDVERQSPNVFRM 148
Query: 58 LAFGAELVLTDPARGMKGAVQKA-EEIRDKTPNSYVLQQFENPANPKIHYETTGPEIWKG 116
GAE++ G E +RD + + A Y T E +
Sbjct: 149 RLMGAEVIPVHS--GSATLKDACNEALRDWSGSYETAHYMLGTAAGPHPYPTIVREFQRM 206
Query: 117 TG-----------GKIDALVSGIGTGGTVTGAGKYLKEHNPEIKLYGVEP--------VE 157
G G++ V GG+ ++ + L GVEP
Sbjct: 207 IGEETKAQILDKEGRLPDAVIACVGGGSNAIGMFADFINDTSVGLIGVEPGGHGIETGEH 266
Query: 158 SAVLSGGKPG-----------------------PHKIQGIGAGFIPGVLDVNLLDETVQI 194
A L G+ G + G L+ + V I
Sbjct: 267 GAPLKHGRVGIYFGMKAPMMQTADGQIEESYSISAGLDFPSVGPQHAYLNSIGRADYVSI 326
Query: 195 SSEEAIETAKLLALKEGLLVGISSGAATAAAIQIAKRPENAGKLIVVV 242
+ +EA+E K L EG++ + S A A A+++ + +L+VV
Sbjct: 327 TDDEALEAFKTLCRHEGIIPALESSHALAHALKMMREQPEKEQLLVVN 374
>d1e5xa_ c.79.1.1 (A:) Threonine synthase {Mouse-ear cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 477
Score = 77.7 bits (190), Expect = 6e-17
Identities = 37/296 (12%), Positives = 84/296 (28%), Gaps = 32/296 (10%)
Query: 1 MIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAF 60
+++ ++ + ++G+T L+ A+ G I+ +PA+ ++
Sbjct: 161 LVSQVNRLRKMKRPVVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKI-SMAQLVQPI 219
Query: 61 GAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFENPANPKIHYETTGPEIWKGTGGK 120
+ G ++ L N + + +
Sbjct: 220 ANGAFVLSIDTDFDGCMKLI--REITAELPIYLANSLNSLRLEGQKTAAIEILQQFDWQV 277
Query: 121 IDALVSGIGTGGTVTGAGKYLKEH------NPEIKLYGVEPVES-----AVLSGGKPGPH 169
D ++ G G + K K + ++ + + SG K
Sbjct: 278 PDWVIVPGGNLGNIYAFYKGFKMCQELGLVDRIPRMVCAQAANANPLYLHYKSGWKDFKP 337
Query: 170 KIQGIGAGFIPGVLDVNLLDET----------VQISSEEAIETAKLLALKEGLLVGISSG 219
+ D +D V+ ++EE + A A G+ + +G
Sbjct: 338 MTASTTFASAIQIGDPVSIDRAVYALKKCNGIVEEATEEELMDAMAQADSTGMFICPHTG 397
Query: 220 AATAAAIQIAKRPENAGKLIVVV--------FPSFGERYLSSVLFESVKKEAESMV 267
A A ++ + A VV F Y S+ + + + + V
Sbjct: 398 VALTALFKLRNQGVIAPTDRTVVVSTAHGLKFTQSKIDYHSNAIPDMACRFSNPPV 453
>d1v7ca_ c.79.1.1 (A:) Threonine synthase {Thermus thermophilus
[TaxId: 274]}
Length = 351
Score = 72.0 bits (175), Expect = 4e-15
Identities = 38/269 (14%), Positives = 75/269 (27%), Gaps = 24/269 (8%)
Query: 1 MIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAF 60
++ A E G ++GNT A AA G I+ +PA ++
Sbjct: 68 AVSKAVEGGAQAV-----ACASTGNTAASAAAYAARAGILAIVVLPAGYVALGKVAQSLV 122
Query: 61 GAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFENPANPKIHYETTGPEIWKGTGGK 120
++ + + +T E+ G
Sbjct: 123 HGARIVQVEGNFDDALRLTQKLTEAFPVA----LVNSVNPHRLEGQKTLAFEVVDELGDA 178
Query: 121 IDALVSGIGTGGTVTGAGKYLKE------HNPEIKLYGVEPVESAVLSGGKPGPHK---- 170
+G G +T K ++ G + +A L G+P
Sbjct: 179 PHYHALPVGNAGNITAHWMGYKAYHALGKAKRLPRMLGFQAAGAAPLVLGRPVERPETLA 238
Query: 171 ----IQGIGAGFIPGVLDVNLLDETVQISSEEAIETAKLLALKEGLLVGISSGAATAAAI 226
I + ++ EE + + LA +EG+ +S AA A
Sbjct: 239 TAIRIGNPASWQGAVRAKEESGGVIEAVTDEEILFAYRYLAREEGIFCEPASAAAMAGVF 298
Query: 227 QIAKRPE-NAGKLIVVVFPSFGERYLSSV 254
++ + +V+ G + ++
Sbjct: 299 KLLREGRLEPESTVVLTLTGHGLKDPATA 327
>d1p5ja_ c.79.1.1 (A:) L-serine dehydratase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 319
Score = 64.4 bits (155), Expect = 1e-12
Identities = 38/261 (14%), Positives = 72/261 (27%), Gaps = 26/261 (9%)
Query: 1 MIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAF 60
++G + ++GN G+ A+ A G I +P + L
Sbjct: 45 FCKRWAKQGCAH-----FVCSSAGNAGMAAAYAARQLGVPATIVVPGTTPALTIERLKNE 99
Query: 61 GAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFENPANPKIHYETTGPEIWKGTGGK 120
GA + + A+ + P + F++P + H
Sbjct: 100 GATCKVVGELLDEAF--ELAKALAKNNPGWVYIPPFDDPLIWEGHASIVKELKETLWEKP 157
Query: 121 IDALVSGIGTGGTVTGAGKYLKEHNPEIKLYGV------------EPVESAVLSGGKPGP 168
+S G G + ++ + + + L
Sbjct: 158 GAIALSVGGGGLLCGVVQGLQECGWGDVPVIAMETFGAHSFHAATTAGKLVSLPKITSVA 217
Query: 169 HKIQGIGAGFIPGVLDVNLLDETVQISSEEAIETAKLLALKEGLLVGISSGAATAAAI-- 226
+ G L + IS +EA+ + E +LV + GAA AA
Sbjct: 218 KALGVKTVGSQALKLFQEHPIFSEVISDQEAVAAIEKFVDDEKILVEPACGAALAAVYSH 277
Query: 227 -----QIAKRPENAGKLIVVV 242
Q+ +VV+
Sbjct: 278 VIQKLQLEGNLRTPLPSLVVI 298
>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus
subtilis [TaxId: 1423]}
Length = 167
Score = 31.1 bits (69), Expect = 0.073
Identities = 12/52 (23%), Positives = 21/52 (40%)
Query: 6 EEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVL 57
E+ GL SVL+ +G G M +GY ++ + + + L
Sbjct: 16 EQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQL 67
>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st
ketoreductase module {Saccharopolyspora erythraea
[TaxId: 1836]}
Length = 259
Score = 29.6 bits (65), Expect = 0.39
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 4/34 (11%)
Query: 12 RPGESVLIEPTSGNTGIGLAF--MAAAKGYRLII 43
+P +VL+ T G G+G A +G ++
Sbjct: 7 KPTGTVLV--TGGTGGVGGQIARWLARRGAPHLL 38
>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus
callarias) [TaxId: 8053]}
Length = 175
Score = 28.1 bits (61), Expect = 0.83
Identities = 21/155 (13%), Positives = 43/155 (27%), Gaps = 11/155 (7%)
Query: 5 AEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAEL 64
A + PG + + + +A R+I ++ ++ FGA
Sbjct: 20 AVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVD---LNPDKFEKAKVFGATD 76
Query: 65 VLT-------DPARGMKGAVQKAEEIRDKTPNSYVLQQ-FENPANPKIHYETTGPEIWKG 116
+ K + + N V++ E+ G
Sbjct: 77 FVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHD 136
Query: 117 TGGKIDALVSGIGTGGTVTGAGKYLKEHNPEIKLY 151
+ L++G G++ G K +K Y
Sbjct: 137 VATRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAY 171
>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo
sapiens), different isozymes [TaxId: 9606]}
Length = 176
Score = 28.0 bits (61), Expect = 0.88
Identities = 9/57 (15%), Positives = 17/57 (29%), Gaps = 3/57 (5%)
Query: 5 AEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFG 61
A + PG + G + A R+I ++ ++ FG
Sbjct: 20 AVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVD---INKDKFARAKEFG 73
>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4
12-hydroxydehydrogenase/prostaglandin 15-keto reductase
{Guinea pig (Cavia porcellus) [TaxId: 10141]}
Length = 182
Score = 27.7 bits (60), Expect = 1.2
Identities = 10/40 (25%), Positives = 20/40 (50%)
Query: 6 EEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITM 45
E ++ GE+VL+ +G G + +A KG +++
Sbjct: 22 LEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAA 61
>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol
dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}
Length = 174
Score = 26.8 bits (58), Expect = 2.3
Identities = 12/57 (21%), Positives = 18/57 (31%), Gaps = 3/57 (5%)
Query: 5 AEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFG 61
E I G SV++ G +GL +A AK + +G
Sbjct: 19 GAELADIEMGSSVVV---IGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYG 72
>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas
putida [TaxId: 303]}
Length = 195
Score = 26.7 bits (58), Expect = 2.7
Identities = 21/142 (14%), Positives = 44/142 (30%), Gaps = 10/142 (7%)
Query: 7 EKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVL 66
+ PG +V + +G +GLA A+A+ + + ++ R A G E+
Sbjct: 19 VTAGVGPGSTVYV---AGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIAD 75
Query: 67 TDPARGMKGAVQKAEEIRDKTPNSYVLQQFENPANPKIHYETTGPEIWKGTGGKIDALVS 126
+ E+I V + + +++L+
Sbjct: 76 LSLDTPL------HEQIAALLGEPEVDCAVDAVGFEA-RGHGHEGAKHEAPATVLNSLMQ 128
Query: 127 GIGTGGTVTGAGKYLKEHNPEI 148
G + G Y+ E +
Sbjct: 129 VTRVAGKIGIPGLYVTEDPGAV 150
>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus
musculus), class II [TaxId: 10090]}
Length = 174
Score = 26.4 bits (57), Expect = 3.0
Identities = 10/57 (17%), Positives = 20/57 (35%), Gaps = 3/57 (5%)
Query: 5 AEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFG 61
A + PG + + G +GL+ + K + ++ E+ A G
Sbjct: 20 AINTAKVTPGSTCAV---FGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALG 73
>d1l1qa_ c.61.1.1 (A:) Adenine PRTase {Giardia lamblia [TaxId:
5741]}
Length = 181
Score = 26.2 bits (57), Expect = 4.1
Identities = 7/71 (9%), Positives = 20/71 (28%)
Query: 83 IRDKTPNSYVLQQFENPANPKIHYETTGPEIWKGTGGKIDALVSGIGTGGTVTGAGKYLK 142
+R + + + + G + + TGGT+ A + +
Sbjct: 81 LRKAGKLPGDVCKCTFDMEYQKGVTIEVQKRQLGPHDVVLLHDDVLATGGTLLAAIELCE 140
Query: 143 EHNPEIKLYGV 153
+ + +
Sbjct: 141 TAGVKPENIYI 151
>d1nbwb_ c.51.3.2 (B:) Glycerol dehydratase reactivase, beta subunit
{Klebsiella pneumoniae [TaxId: 573]}
Length = 113
Score = 25.5 bits (56), Expect = 4.2
Identities = 12/43 (27%), Positives = 17/43 (39%)
Query: 193 QISSEEAIETAKLLALKEGLLVGISSGAATAAAIQIAKRPENA 235
+A L A L VGI A+ A+ A+ P +A
Sbjct: 37 YDGGGDAAALGALAARSSPLRVGIGLSASGEIALTHAQLPADA 79
>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 252
Score = 25.8 bits (56), Expect = 5.4
Identities = 8/65 (12%), Positives = 19/65 (29%), Gaps = 7/65 (10%)
Query: 22 TSGNTGIGLAF--MAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPA--RGMKGAV 77
T+ G+ + G+ + S +++ L AF P + +
Sbjct: 6 TNVKHFGGMGSALRLSEAGHTVACH---DESFKQKDELEAFAETYPQLKPMSEQEPAELI 62
Query: 78 QKAEE 82
+
Sbjct: 63 EAVTS 67
>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus
caballus) [TaxId: 9796]}
Length = 176
Score = 25.7 bits (55), Expect = 5.5
Identities = 7/55 (12%), Positives = 17/55 (30%), Gaps = 3/55 (5%)
Query: 7 EKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFG 61
+ + G + + G + AA R+I ++ ++ G
Sbjct: 22 KVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVD---INKDKFAKAKEVG 73
>d1o17a2 c.27.1.1 (A:71-343) Anthranilate phosphoribosyltransferase
(TrpD) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Length = 273
Score = 25.8 bits (56), Expect = 6.0
Identities = 4/34 (11%), Positives = 11/34 (32%)
Query: 53 RRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDK 86
+ + L D + + A+ + +K
Sbjct: 215 AEFIKINTAVALFALDRVGDFREGYEYADHLIEK 248
>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1
{Human (Homo sapiens) [TaxId: 9606]}
Length = 269
Score = 25.5 bits (55), Expect = 6.4
Identities = 9/33 (27%), Positives = 16/33 (48%), Gaps = 4/33 (12%)
Query: 14 GESVLIEPTSGNTGIGLAF--MAAAKGYRLIIT 44
G+ V++ T + GIG A G +++T
Sbjct: 14 GKKVIV--TGASKGIGREMAYHLAKMGAHVVVT 44
>d1szqa_ e.44.1.1 (A:) 2-methylcitrate dehydratase PrpD {Escherichia
coli [TaxId: 562]}
Length = 473
Score = 26.0 bits (56), Expect = 6.5
Identities = 11/40 (27%), Positives = 16/40 (40%), Gaps = 3/40 (7%)
Query: 193 QISSEEAIETAKLLALKEGLLVGISSGAATAAAIQIAKRP 232
+ISS+ A +TA L +G A A + P
Sbjct: 17 EISSKVAYDTAHYCLLD---TLGCGLEALEYPACKKLLGP 53
>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine
reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 236
Score = 25.6 bits (55), Expect = 6.5
Identities = 5/33 (15%), Positives = 10/33 (30%), Gaps = 4/33 (12%)
Query: 14 GESVLIEPTSGNTGIGLAF--MAAAKGYRLIIT 44
VL+ G +G A+ + +
Sbjct: 2 ARRVLV--YGGRGALGSRCVQAFRARNWWVASI 32
>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine
reductase) {Nematode (Caenorhabditis elegans) [TaxId:
6239]}
Length = 235
Score = 25.2 bits (54), Expect = 7.8
Identities = 6/30 (20%), Positives = 11/30 (36%), Gaps = 4/30 (13%)
Query: 17 VLIEPTSGNTGIGLAF--MAAAKGYRLIIT 44
V++ G +G A GY ++
Sbjct: 5 VIV--YGGKGALGSAILEFFKKNGYTVLNI 32
>d1o8ba1 c.124.1.4 (A:23-126,A:199-218) D-ribose-5-phosphate
isomerase (RpiA), catalytic domain {Escherichia coli
[TaxId: 562]}
Length = 124
Score = 24.5 bits (53), Expect = 9.7
Identities = 8/38 (21%), Positives = 12/38 (31%)
Query: 125 VSGIGTGGTVTGAGKYLKEHNPEIKLYGVEPVESAVLS 162
+ G+GTG T L +I+ S
Sbjct: 1 IVGVGTGSTAAHFIDALGTMKGQIEGAVSSSDASTEKL 38
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.313 0.134 0.373
Gapped
Lambda K H
0.267 0.0431 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 974,507
Number of extensions: 46716
Number of successful extensions: 176
Number of sequences better than 10.0: 1
Number of HSP's gapped: 149
Number of HSP's successfully gapped: 42
Length of query: 270
Length of database: 2,407,596
Length adjustment: 84
Effective length of query: 186
Effective length of database: 1,254,276
Effective search space: 233295336
Effective search space used: 233295336
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 52 (24.6 bits)