BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024255
(270 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q55480|YZ37_SYNY3 Uncharacterized sugar kinase slr0537 OS=Synechocystis sp. (strain
PCC 6803 / Kazusa) GN=slr0537 PE=3 SV=1
Length = 333
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 66/139 (47%), Gaps = 10/139 (7%)
Query: 122 RWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGS 181
++DV G+G A+VD V + L LG++KG LV ++ + K ++GGS
Sbjct: 4 KYDVYGMGNALVDMEFEVTPEQLASLGIDKGVMTLVEEARENELIAQLAQQRGKQSSGGS 63
Query: 182 LSNSLVALARLGGKPIGGPALNVAMTGSVGSDPLGGFYRAKLRRANVAFC--SEPIKDGT 239
+N+LV+LA+LGG VG D G FY L + E +G
Sbjct: 64 AANTLVSLAQLGGTGF--------YACKVGKDEAGAFYLQDLNDCGLDTNPHHETAGEGI 115
Query: 240 TGTVIVLTTPDAQRAMLAY 258
TG +V TPDA R M A+
Sbjct: 116 TGKCLVFVTPDADRTMNAF 134
>sp|P55262|ADK_CRIGR Adenosine kinase OS=Cricetulus griseus GN=ADK PE=1 SV=2
Length = 361
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 5/133 (3%)
Query: 125 VLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSN 184
+ G+G ++D S +VD DFL++ L+ + L + + + + AGGS N
Sbjct: 25 LFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEEKHKELFDELVRKFKVEYHAGGSTQN 84
Query: 185 SLVALARLGGKPIGGPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVI 244
S+ ++ I P G +G D G ++K A+V + TGT
Sbjct: 85 SI----KVAQWMIQKPHKAATFFGCIGIDKFGEILKSKAAEAHVDAHYYEQNEQPTGTCA 140
Query: 245 VLTTPDAQRAMLA 257
T D R+++A
Sbjct: 141 ACITGD-NRSLVA 152
>sp|P55263|ADK_HUMAN Adenosine kinase OS=Homo sapiens GN=ADK PE=1 SV=2
Length = 362
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 5/133 (3%)
Query: 125 VLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSN 184
+ G+G ++D S +VD DFL++ L+ + L + + + + AGGS N
Sbjct: 26 LFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGSTQN 85
Query: 185 SLVALARLGGKPIGGPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVI 244
S+ ++ I P G +G D G + K A+V + TGT
Sbjct: 86 SI----KVAQWMIQQPHKAATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCA 141
Query: 245 VLTTPDAQRAMLA 257
T D R+++A
Sbjct: 142 ACITGD-NRSLIA 153
>sp|Q64640|ADK_RAT Adenosine kinase OS=Rattus norvegicus GN=Adk PE=1 SV=3
Length = 361
Score = 40.8 bits (94), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 4/104 (3%)
Query: 125 VLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSN 184
+ G+G ++D S +VD DFL++ L+ + L + + + + AGGS N
Sbjct: 25 LFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGSTQN 84
Query: 185 SLVALARLGGKPIGGPALNVAMTGSVGSDPLGGFYRAKLRRANV 228
S+ ++ I P G +G D G ++K A+V
Sbjct: 85 SM----KVAQWMIQEPHRAATFFGCIGIDKFGEILKSKAADAHV 124
>sp|P55264|ADK_MOUSE Adenosine kinase OS=Mus musculus GN=Adk PE=1 SV=2
Length = 361
Score = 40.0 bits (92), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 4/104 (3%)
Query: 125 VLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSN 184
+ G+G ++D S +VD DFL++ L+ + L + + + + AGGS N
Sbjct: 25 LFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGSTQN 84
Query: 185 SLVALARLGGKPIGGPALNVAMTGSVGSDPLGGFYRAKLRRANV 228
S+ ++ I P G +G D G + K A+V
Sbjct: 85 SM----KVAQWLIQEPHKAATFFGCIGIDKFGEILKRKAADAHV 124
>sp|Q9K6K1|RBSK_BACHD Ribokinase OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197
/ FERM 7344 / JCM 9153 / C-125) GN=rbsK PE=3 SV=1
Length = 294
Score = 39.3 bits (90), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 9/87 (10%)
Query: 171 GCSYKAAAGGSLSNSLVALARLGGKPIGGPALNVAMTGSVGSDPLGGFYRAKLRRANVAF 230
G ++ GG +N VA ARLG NV M G VG DP G L + +
Sbjct: 32 GKDFRTVPGGKGANQAVAAARLGA--------NVRMIGRVGDDPFGHVLTENLAKEGIIT 83
Query: 231 CS-EPIKDGTTGTVIVLTTPDAQRAML 256
S +P+ D T+G +L + R ++
Sbjct: 84 DSVKPVTDCTSGVATILLSDRDNRIIV 110
>sp|P0AEW6|INGK_ECOLI Inosine-guanosine kinase OS=Escherichia coli (strain K12) GN=gsk
PE=1 SV=1
Length = 434
Score = 36.6 bits (83), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 125 VLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNH---EERGRVLRAMDGCSYKAAAGGS 181
V+G+ Q +VD VDD+F+ER GL G ++ E + L+ + +++ AGG+
Sbjct: 36 VVGIDQTLVDIEAKVDDEFIERYGLSAGHSLVIEDDVAEALYQELKQKNLITHQ-FAGGT 94
Query: 182 LSNSL 186
+ N++
Sbjct: 95 IGNTM 99
>sp|P0AEW7|INGK_ECOL6 Inosine-guanosine kinase OS=Escherichia coli O6:H1 (strain CFT073 /
ATCC 700928 / UPEC) GN=gsk PE=3 SV=1
Length = 434
Score = 36.6 bits (83), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 125 VLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNH---EERGRVLRAMDGCSYKAAAGGS 181
V+G+ Q +VD VDD+F+ER GL G ++ E + L+ + +++ AGG+
Sbjct: 36 VVGIDQTLVDIEAKVDDEFIERYGLSAGHSLVIEDDVAEALYQELKQKNLITHQ-FAGGT 94
Query: 182 LSNSL 186
+ N++
Sbjct: 95 IGNTM 99
>sp|P0AEW8|INGK_ECO57 Inosine-guanosine kinase OS=Escherichia coli O157:H7 GN=gsk PE=3
SV=1
Length = 434
Score = 36.6 bits (83), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 125 VLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNH---EERGRVLRAMDGCSYKAAAGGS 181
V+G+ Q +VD VDD+F+ER GL G ++ E + L+ + +++ AGG+
Sbjct: 36 VVGIDQTLVDIEAKVDDEFIERYGLSAGHSLVIEDDVAEALYQELKQKNLITHQ-FAGGT 94
Query: 182 LSNSL 186
+ N++
Sbjct: 95 IGNTM 99
>sp|P22824|SCRK_VIBAL Fructokinase OS=Vibrio alginolyticus GN=scrK PE=3 SV=1
Length = 307
Score = 36.2 bits (82), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 37/75 (49%), Gaps = 11/75 (14%)
Query: 179 GGSLSNSLVALARLGGKPIGGPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSE-PIKD 237
GG+ +N VA+ARL GK A G VG DP G F ++ L + V C+E IKD
Sbjct: 27 GGAPANVAVAIARLSGKS--------AFFGRVGDDPFGRFMQSILDQEGV--CTEFLIKD 76
Query: 238 GTTGTVIVLTTPDAQ 252
T V+ D Q
Sbjct: 77 PEQRTSTVVVDLDDQ 91
>sp|O34768|YDJE_BACSU Uncharacterized sugar kinase YdjE OS=Bacillus subtilis (strain 168)
GN=ydjE PE=3 SV=1
Length = 320
Score = 35.8 bits (81), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 8/60 (13%)
Query: 169 MDGCSYKAAAGGSLSNSLVALARLGGKPIGGPALNVAMTGSVGSDPLGGFYRAKLRRANV 228
M+G + +AGG+ +N A+A+LGG + A +G VG DP G F + L +V
Sbjct: 26 MEGRQFLKSAGGAPANVSAAIAKLGG--------DAAFSGKVGKDPFGYFLKRTLDAVHV 77
>sp|O49923|ADK_PHYPA Adenosine kinase OS=Physcomitrella patens subsp. patens GN=ADK PE=2
SV=1
Length = 343
Score = 35.0 bits (79), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 12/126 (9%)
Query: 125 VLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLV--NHEERGRVLRAMDGCSYKAAAGGSL 182
+LG+G ++D S +VDD FLE+ GL L H + L A Y AGG+
Sbjct: 7 LLGMGNPLLDISCVVDDAFLEKYGLTLNNAILAEDKHLPMYKELAANPDVEY--IAGGAT 64
Query: 183 SNSLVALARLGGKPIGGPALNVAMTGSVGSDPLGG--FYRAKLRRANVAF-CSEPIKDGT 239
N++ R+ + + G + + G VG D G F A N+ + E + GT
Sbjct: 65 QNTI----RI-AQWMLGESNATSYFGCVGKDEYGDRMFKLASEGGVNIRYDVDEDLPTGT 119
Query: 240 TGTVIV 245
G ++V
Sbjct: 120 CGVLVV 125
>sp|Q9TVW2|ADK_TOXGO Adenosine kinase OS=Toxoplasma gondii GN=AK PE=1 SV=1
Length = 363
Score = 34.7 bits (78), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 6/92 (6%)
Query: 125 VLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSN 184
V +G ++D V FL+ L++G L E+ R+ +D + + GGS N
Sbjct: 15 VFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQM-RIYSTLDQFNPTSLPGGSALN 73
Query: 185 SLVALARLGGKPIGGPALNVAMTGSVGSDPLG 216
S+ + +L KP G A G++G DP G
Sbjct: 74 SVRVVQKLLRKP--GSA---GYMGAIGDDPRG 100
>sp|P26984|SCRK_SALTM Fructokinase OS=Salmonella typhimurium GN=scrK PE=3 SV=1
Length = 307
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 18/87 (20%)
Query: 160 EERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPALNVAMTGSVGSDPLGGFY 219
E GR+L+ GG+ +N V +ARLGG N G+VG DP G +
Sbjct: 18 ESEGRLLQC---------PGGAPANVAVGVARLGG--------NSGFIGAVGGDPFGRYM 60
Query: 220 RAKLRRANVAFCSEPIKDG-TTGTVIV 245
R L++ V + D T TV+V
Sbjct: 61 RHTLQQEQVDVSHMYLDDQHRTSTVVV 87
>sp|Q9LZG0|ADK2_ARATH Adenosine kinase 2 OS=Arabidopsis thaliana GN=ADK2 PE=1 SV=1
Length = 345
Score = 32.7 bits (73), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 8/124 (6%)
Query: 125 VLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSN 184
+LG+G ++D S +VDD+FL + ++ L + + + AGG+ N
Sbjct: 11 LLGMGNPLLDISAVVDDEFLTKYDIKLNNAILAEDKHLPMYDEMSSKFNVEYIAGGATQN 70
Query: 185 SLVALARLGGKPIGGPALNVAMTGSVGSDPLGGFYRAKLRRANV---AFCSEPIKDGTTG 241
S+ ++ + P M GS+G D G + A V + E GT G
Sbjct: 71 SI----KVAQWMLQIPGATSYM-GSIGKDKYGEAMKKDATAAGVNVHYYEDESAPTGTCG 125
Query: 242 TVIV 245
+V
Sbjct: 126 VCVV 129
>sp|P44331|RBSK_HAEIN Ribokinase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121
/ KW20 / Rd) GN=rbsK PE=3 SV=1
Length = 306
Score = 31.6 bits (70), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 8/48 (16%)
Query: 169 MDGCSYKAAAGGSLSNSLVALARLGGKPIGGPALNVAMTGSVGSDPLG 216
+ G +Y+ A GG +N VA ARLG K VA +GSD +G
Sbjct: 29 LTGQNYQIAYGGKGANQAVAAARLGAK--------VAFISCIGSDSIG 68
>sp|Q6LK43|IOLC_PHOPR 5-dehydro-2-deoxygluconokinase OS=Photobacterium profundum GN=iolC
PE=3 SV=1
Length = 331
Score = 30.8 bits (68), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 8/59 (13%)
Query: 170 DGCSYKAAAGGSLSNSLVALARLGGKPIGGPALNVAMTGSVGSDPLGGFYRAKLRRANV 228
D + GGS +N VA+++LGGK V G V D GG+ R + +
Sbjct: 35 DISGFNKFVGGSAANIAVAISKLGGK--------VGFIGCVADDAFGGYVRGYMTEQGI 85
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.135 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 111,493,465
Number of Sequences: 539616
Number of extensions: 5283608
Number of successful extensions: 32125
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 143
Number of HSP's that attempted gapping in prelim test: 29532
Number of HSP's gapped (non-prelim): 2065
length of query: 270
length of database: 191,569,459
effective HSP length: 116
effective length of query: 154
effective length of database: 128,974,003
effective search space: 19861996462
effective search space used: 19861996462
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 60 (27.7 bits)