Query 024255
Match_columns 270
No_of_seqs 168 out of 1422
Neff 4.9
Searched_HMMs 29240
Date Mon Mar 25 05:05:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024255.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024255hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3uq6_A Adenosine kinase, putat 99.9 2.6E-23 9E-28 193.5 13.9 138 122-265 26-164 (372)
2 4e3a_A Sugar kinase protein; s 99.9 3E-22 1E-26 185.4 13.3 135 120-264 23-158 (352)
3 3vas_A Putative adenosine kina 99.9 6.2E-22 2.1E-26 184.4 14.0 135 121-264 23-161 (370)
4 3otx_A Adenosine kinase, putat 99.9 7.8E-22 2.7E-26 180.5 12.2 136 121-264 6-145 (347)
5 3loo_A Anopheles gambiae adeno 99.9 2E-21 6.8E-26 180.1 11.5 140 116-264 17-159 (365)
6 1bx4_A Protein (adenosine kina 99.8 3E-19 1E-23 163.0 12.0 135 121-264 5-143 (345)
7 2abs_A Adenosine kinase, AK; r 99.8 1.1E-18 3.8E-23 162.4 14.7 136 119-264 29-167 (383)
8 3go6_A Ribokinase RBSK; phosph 99.8 3.6E-18 1.2E-22 155.2 12.6 114 122-263 19-132 (310)
9 1rkd_A Ribokinase; carbohydrat 99.8 4.3E-18 1.5E-22 152.8 12.3 116 120-263 2-118 (309)
10 2fv7_A Ribokinase; structural 99.7 5.7E-18 2E-22 154.4 12.5 117 119-263 21-138 (331)
11 3ry7_A Ribokinase; transferase 99.7 9.7E-18 3.3E-22 149.9 12.5 115 123-264 3-118 (304)
12 2c4e_A Sugar kinase MJ0406; tr 99.7 7.4E-18 2.5E-22 151.4 10.7 114 123-264 6-120 (302)
13 2hlz_A Ketohexokinase; non-pro 99.7 3.2E-17 1.1E-21 148.4 14.1 117 119-263 14-132 (312)
14 2rbc_A Sugar kinase, AGR_C_456 99.7 2E-17 7E-22 152.4 11.8 115 121-263 28-143 (343)
15 3ikh_A Carbohydrate kinase; tr 99.7 8.2E-18 2.8E-22 151.4 8.9 113 123-263 3-115 (299)
16 3h49_A Ribokinase; transferase 99.7 3.1E-17 1.1E-21 149.0 11.2 116 120-262 3-119 (325)
17 3ljs_A Fructokinase; fructokia 99.7 5.9E-17 2E-21 147.6 12.6 110 120-262 2-114 (338)
18 3kzh_A Probable sugar kinase; 99.7 8.2E-17 2.8E-21 146.4 12.9 116 119-263 3-120 (328)
19 3bf5_A Ribokinase related prot 99.7 7.8E-17 2.7E-21 146.2 11.2 112 121-263 19-131 (306)
20 2pkf_A Adenosine kinase; trans 99.7 2E-16 7E-21 144.6 13.7 127 118-264 6-133 (334)
21 3lhx_A Ketodeoxygluconokinase; 99.7 7.3E-17 2.5E-21 145.9 8.8 100 123-262 5-109 (319)
22 1vm7_A Ribokinase; TM0960, str 99.7 2.3E-16 7.7E-21 143.0 11.9 112 123-264 15-127 (311)
23 2nwh_A AGR_C_3442P, carbohydra 99.7 2.4E-16 8.3E-21 142.6 11.9 110 123-261 4-113 (317)
24 3ewm_A Uncharacterized sugar k 99.7 2.7E-16 9.3E-21 141.8 12.1 106 123-262 2-108 (313)
25 3pl2_A Sugar kinase, ribokinas 99.7 1.2E-16 4.1E-21 144.0 9.4 110 119-260 5-115 (319)
26 3b1n_A Ribokinase, putative; r 99.7 3.5E-16 1.2E-20 142.8 12.5 121 124-264 2-124 (326)
27 4e69_A 2-dehydro-3-deoxyglucon 99.7 3E-16 1E-20 143.4 11.3 104 120-262 21-127 (328)
28 3hj6_A Fructokinase, FRK; fruc 99.7 3.1E-16 1.1E-20 142.5 10.6 112 121-265 20-132 (327)
29 2v78_A Fructokinase; transfera 99.7 8.7E-16 3E-20 138.2 13.2 104 123-259 2-108 (313)
30 2dcn_A Hypothetical fructokina 99.6 9.9E-16 3.4E-20 137.5 12.5 104 123-259 2-108 (311)
31 1tyy_A Putative sugar kinase; 99.6 4.6E-16 1.6E-20 142.8 10.6 105 120-263 22-129 (339)
32 1v1a_A 2-keto-3-deoxygluconate 99.6 1.5E-15 5.2E-20 136.4 13.6 104 123-259 2-105 (309)
33 4du5_A PFKB; structural genomi 99.6 6.3E-16 2.2E-20 141.4 10.7 104 120-256 24-128 (336)
34 2qcv_A Putative 5-dehydro-2-de 99.6 2.8E-15 9.6E-20 135.7 12.7 109 120-260 9-119 (332)
35 3ktn_A Carbohydrate kinase, PF 99.6 2.2E-15 7.5E-20 137.4 12.0 103 123-258 3-105 (346)
36 3iq0_A Putative ribokinase II; 99.6 2.7E-15 9.4E-20 136.4 12.3 107 122-259 3-110 (330)
37 4gm6_A PFKB family carbohydrat 99.6 3.5E-15 1.2E-19 136.3 10.7 106 123-261 25-131 (351)
38 2ajr_A Sugar kinase, PFKB fami 99.6 8.2E-15 2.8E-19 133.6 10.9 113 122-262 12-127 (331)
39 3cqd_A 6-phosphofructokinase i 99.6 1.3E-14 4.3E-19 130.2 12.0 108 124-262 3-112 (309)
40 3umo_A 6-phosphofructokinase i 99.6 2E-14 6.8E-19 128.9 12.2 109 123-262 2-112 (309)
41 3ie7_A LIN2199 protein; phosph 99.6 3.4E-14 1.2E-18 128.2 13.5 108 124-262 4-114 (320)
42 2f02_A Tagatose-6-phosphate ki 99.5 7.2E-14 2.5E-18 126.7 12.8 108 123-262 3-110 (323)
43 2qhp_A Fructokinase; NP_810670 99.5 4.2E-14 1.4E-18 125.8 10.0 94 123-262 4-98 (296)
44 2jg1_A Tagatose-6-phosphate ki 99.5 1.7E-13 5.9E-18 125.0 12.7 108 123-262 21-128 (330)
45 4e84_A D-beta-D-heptose 7-phos 99.5 1.5E-13 5.3E-18 127.3 9.8 113 120-259 51-165 (352)
46 2jg5_A Fructose 1-phosphate ki 99.4 9.5E-13 3.3E-17 117.5 12.0 105 125-262 3-107 (306)
47 2afb_A 2-keto-3-deoxygluconate 99.4 8.3E-13 2.8E-17 120.8 11.3 104 122-259 12-116 (351)
48 2abq_A Fructose 1-phosphate ki 99.4 9.4E-13 3.2E-17 118.0 11.2 105 125-262 3-107 (306)
49 3kd6_A Carbohydrate kinase, PF 99.3 1.5E-12 5E-17 117.8 7.7 101 123-263 3-107 (313)
50 1vk4_A PFKB carbohydrate kinas 99.1 2.9E-11 9.9E-16 108.5 5.3 80 173-264 30-109 (298)
51 2yxt_A Pyridoxal kinase; beta 73.9 0.29 9.8E-06 43.5 -2.4 37 204-244 13-51 (312)
52 3ost_A Serine/threonine-protei 50.4 4.7 0.00016 33.0 0.9 21 24-44 3-23 (128)
53 1gc5_A ADP-dependent glucokina 50.3 12 0.00042 36.4 4.0 70 124-196 32-136 (467)
54 3drw_A ADP-specific phosphofru 41.9 33 0.0011 33.4 5.6 87 117-212 22-143 (474)
55 3e5d_A Putative glyoxalase I; 36.5 65 0.0022 22.9 5.3 42 216-257 85-126 (127)
56 1l2l_A ADP-dependent glucokina 35.4 17 0.00057 35.3 2.3 70 124-196 27-131 (457)
57 3l7t_A SMU.1112C, putative unc 33.8 95 0.0033 21.9 5.8 40 216-255 92-131 (134)
58 1vrm_A Hypothetical protein TM 32.8 7.3 0.00025 35.9 -0.7 23 208-230 163-185 (325)
59 1ua4_A Glucokinase, ADP-depend 32.4 25 0.00084 34.0 2.9 20 177-196 109-128 (455)
60 2p7o_A Glyoxalase family prote 32.3 96 0.0033 22.4 5.7 47 215-261 78-124 (133)
61 2p25_A Glyoxalase family prote 30.5 1.3E+02 0.0045 21.0 6.1 39 216-255 84-123 (126)
62 1doa_B RHO GDI 1, protein (GDP 30.3 30 0.001 30.6 2.8 40 77-116 6-46 (219)
63 1uvq_C Orexin; immunology, MHC 30.1 15 0.00052 22.9 0.6 18 68-85 8-25 (33)
64 3uh9_A Metallothiol transferas 28.1 91 0.0031 23.1 5.0 45 215-259 75-119 (145)
65 3iwt_A 178AA long hypothetical 26.2 41 0.0014 27.3 2.9 22 185-214 45-66 (178)
66 3ghj_A Putative integron gene 25.5 99 0.0034 23.2 4.8 42 216-257 98-139 (141)
67 2ayu_A Nucleosome assembly pro 23.2 17 0.00059 34.9 0.0 8 59-66 313-320 (417)
68 1xqa_A Glyoxalase/bleomycin re 22.8 1.3E+02 0.0046 21.0 4.9 45 209-256 67-111 (113)
69 2pjs_A AGR_C_3564P, uncharacte 21.7 2.1E+02 0.0072 20.0 6.0 41 216-257 75-116 (119)
70 2rbb_A Glyoxalase/bleomycin re 20.6 1.4E+02 0.0049 21.9 4.8 44 215-258 88-131 (141)
71 1r9c_A Glutathione transferase 20.4 1.6E+02 0.0055 21.6 5.1 44 216-259 79-122 (139)
72 3m2o_A Glyoxalase/bleomycin re 20.4 1.8E+02 0.0061 22.4 5.5 43 216-259 101-144 (164)
73 3r4q_A Lactoylglutathione lyas 20.3 2E+02 0.0067 22.0 5.7 50 209-259 83-132 (160)
No 1
>3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A*
Probab=99.90 E-value=2.6e-23 Score=193.51 Aligned_cols=138 Identities=20% Similarity=0.255 Sum_probs=119.1
Q ss_pred CCcEEEEcCcceeeEeecChhHHHhhccCCCceeeeccccccceeeeccCCccEEecCChHHHHHHHHHHhCCCCCCCCC
Q 024255 122 RWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPA 201 (270)
Q Consensus 122 ~~~VlvIG~alVDii~~vd~~~pe~~~L~~G~~~lv~~ee~~~l~e~i~~~~~~~~~GGsAaNtAvaLARLG~~~~~~p~ 201 (270)
...|++||+++||+++++++.|+++++|++|.++++++++++.+.+..........+||+++|+|+++++||.+.
T Consensus 26 ~~~v~giGnalvDi~~~v~d~~l~~~~l~kg~m~l~~~~~~~~~~~~~~~~~~~~~~GGsa~N~a~~la~LG~~~----- 100 (372)
T 3uq6_A 26 EGYVFGMGNPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMTIYDEIQKKKKLNYIAGGATLNTVKMIQWIIQKP----- 100 (372)
T ss_dssp TTCEEEEECCEEEEEEECCTHHHHHTTCCTTEEEECCGGGTTHHHHHHTSSSCEEEECCHHHHHHHHHHHHHCST-----
T ss_pred CCeEEEECCceeeEEEEeCHHHHHHcCCCCCceEEcCHHHHHHHHHHhccCCeEEeCCcHHHHHHHHHHHcCCCC-----
Confidence 346999999999999999999999999999999999866555444444455678899999999999999999762
Q ss_pred cceEEEEEeCCCchHHHHHHHHHHcCCCCccccccCC-CCceEEEEEcCCCCeEEEEecCccccc
Q 024255 202 LNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDG-TTGTVIVLTTPDAQRAMLAYQVSFQRS 265 (270)
Q Consensus 202 ~~V~fVG~VGdD~~Ge~I~e~L~e~GVdt~~v~~~~g-~TG~~~VLv~~dGeRTiv~~~GAn~~~ 265 (270)
..|+|+|+||+|.+|+++++.|++.||++.++...+. +|+.|+++++ +|+|+|++|+|++...
T Consensus 101 ~~~~fiG~VG~D~~G~~l~~~L~~~GV~~~~~~~~~~~~T~~~~v~~~-dgert~~~~~ga~~~l 164 (372)
T 3uq6_A 101 FVCSYVGCIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVS-EKLRSMVTYLGAACDL 164 (372)
T ss_dssp TSEEEEEEECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEEC-SSCEEEEEEEEGGGGC
T ss_pred CcEEEEeeecCCHHHHHHHHHHHHcCCCceeeeecCCCCceEEEEEcC-CCceEEEEeccchhhc
Confidence 2379999999999999999999999999999877664 8999999886 8999999999987653
No 2
>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A*
Probab=99.88 E-value=3e-22 Score=185.40 Aligned_cols=135 Identities=30% Similarity=0.475 Sum_probs=121.2
Q ss_pred CCCCcEEEEcCcceeeEeecChhHHHhhccCCCceeeeccccccceeeeccCCccEEecCChHHHHHHHHHHhCCCCCCC
Q 024255 120 PERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGG 199 (270)
Q Consensus 120 ~~~~~VlvIG~alVDii~~vd~~~pe~~~L~~G~~~lv~~ee~~~l~e~i~~~~~~~~~GGsAaNtAvaLARLG~~~~~~ 199 (270)
|++++|+|||++++|++.++++.|++++++++|.+++++.++...+++.+. .....+||+++|+|++|+|||.+
T Consensus 23 m~~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~li~~~~~~~l~~~~~--~~~~~~GG~~~N~A~~la~LG~~---- 96 (352)
T 4e3a_A 23 MTRFDVLTVGNAIVDIISRCNDQFLIDNQITKAAMNLIDAERAELLYSRMG--PALEASGGSAGNTAAGVANLGGK---- 96 (352)
T ss_dssp CCSEEEEEECCCEEEEEEECCHHHHHHTTCCTTSEEECCHHHHHHHHHHSC--SCEEEECCHHHHHHHHHHHHTCC----
T ss_pred CCcccEEEECCceeeEEEecCHHHHHHcCCCCCcceEeCHHHHHHHHHHhh--hccEecCCHHHHHHHHHHHcCCC----
Confidence 557899999999999999999989999999999999998776666655542 45678999999999999999998
Q ss_pred CCcceEEEEEeCCCchHHHHHHHHHHcCCCCccccccC-CCCceEEEEEcCCCCeEEEEecCcccc
Q 024255 200 PALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKD-GTTGTVIVLTTPDAQRAMLAYQVSFQR 264 (270)
Q Consensus 200 p~~~V~fVG~VGdD~~Ge~I~e~L~e~GVdt~~v~~~~-g~TG~~~VLv~~dGeRTiv~~~GAn~~ 264 (270)
|.|+|+||+|.+|+++++.|++.||+++++.+.+ .+|++|+++++++|+|+|++|+|++..
T Consensus 97 ----~~~ig~vG~D~~G~~l~~~l~~~GV~~~~~~~~~~~~T~~~~v~v~~~g~r~~~~~~ga~~~ 158 (352)
T 4e3a_A 97 ----AAYFGNVAADQLGDIFTHDIRAQGVHYQTKPKGAFPPTARSMIFVTEDGERSMNTYLGACVE 158 (352)
T ss_dssp ----EEEECCCCSSHHHHHHHHHHHHTTCEECCCCCCSSSCCEEEEEEECTTSCEEEEEECGGGGG
T ss_pred ----eEEEEEECCChHHHHHHHHHHHcCCccceeeccCCCCCeEEEEEEcCCCceEEEeccChhhc
Confidence 6999999999999999999999999999987655 489999999999999999999998754
No 3
>3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A*
Probab=99.87 E-value=6.2e-22 Score=184.43 Aligned_cols=135 Identities=19% Similarity=0.218 Sum_probs=123.2
Q ss_pred CCCcEEEEcCcceeeEeecChhHHHhhccCCCceeeeccccccceeeeccCCccEEecCChHHHHHHHHHHh---CCCCC
Q 024255 121 ERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARL---GGKPI 197 (270)
Q Consensus 121 ~~~~VlvIG~alVDii~~vd~~~pe~~~L~~G~~~lv~~ee~~~l~e~i~~~~~~~~~GGsAaNtAvaLARL---G~~~~ 197 (270)
.+++|++||++++|+++.+++.|++++++++|.+.++++++.+...+.+.+......+||+++|+|++|+|| |.+
T Consensus 23 ~~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~l~~~~~~P~~ge~~~~~~~~~~~GG~~~N~A~~la~L~~~G~~-- 100 (370)
T 3vas_A 23 SEGYVFGMGNPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMTIYDEIQKKKKLNYIAGGATLNTVKMIQWIIQKPFV-- 100 (370)
T ss_dssp CTTCEEEEECCEEEEEEECCTHHHHHTTCCTTEEEECCGGGTHHHHHHTTSSSCEEEEECHHHHHHHHHHHHHCCTTC--
T ss_pred CCccEEEECCcceeEEEecCHHHHHHcCCCCCceEEccHHHHHHHHHHhhcCCeEEecCCHHHHHHHHHHHhcCCCCc--
Confidence 356999999999999999998899999999999999987777777777777788999999999999999999 888
Q ss_pred CCCCcceEEEEEeCCCchHHHHHHHHHHcCCCCccccc-cCCCCceEEEEEcCCCCeEEEEecCcccc
Q 024255 198 GGPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPI-KDGTTGTVIVLTTPDAQRAMLAYQVSFQR 264 (270)
Q Consensus 198 ~~p~~~V~fVG~VGdD~~Ge~I~e~L~e~GVdt~~v~~-~~g~TG~~~VLv~~dGeRTiv~~~GAn~~ 264 (270)
|.|+|+||+|.+|+++++.|++.||++.++.. ...+|++|+++++ +|+|+|+.++|++..
T Consensus 101 ------~~~ig~vG~D~~G~~~~~~L~~~GV~~~~~~~~~~~~Tg~~~i~v~-~g~rt~~~~~ga~~~ 161 (370)
T 3vas_A 101 ------CSYVGCIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVS-EKLRSMVTYLGAACD 161 (370)
T ss_dssp ------EEEEEEECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEEC-SSCEEEEEEEEGGGG
T ss_pred ------EEEEEEEcCChhHHHHHHHHHHcCCcccccccCCCCCceEEEEEEe-CCceeEEEccchhhh
Confidence 69999999999999999999999999999877 3469999999998 899999999998754
No 4
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A*
Probab=99.86 E-value=7.8e-22 Score=180.49 Aligned_cols=136 Identities=22% Similarity=0.296 Sum_probs=121.8
Q ss_pred CCCcEEEEcCcceeeEeecChhHHHhhccCCCceeeeccccccceeeeccCCccEEecCChHHHHHHHHHHh----CCCC
Q 024255 121 ERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARL----GGKP 196 (270)
Q Consensus 121 ~~~~VlvIG~alVDii~~vd~~~pe~~~L~~G~~~lv~~ee~~~l~e~i~~~~~~~~~GGsAaNtAvaLARL----G~~~ 196 (270)
++++|+++|++++|+++.+++.|+++|++++|.++++++++.+...+.+.+..+...+||+++|+|+++++| |.+.
T Consensus 6 ~~~~v~~iG~~~lD~~~~v~~~~l~~~~l~~g~~~l~~~~~~p~~~~~~~~~~~~~~~GG~~~N~a~~la~L~~~~G~~~ 85 (347)
T 3otx_A 6 APLRVYVQCNPLLDVSAHVSDEFLVKYGLERGTAILLSERQKGIFDDIEKMPNVRYVPGGSGLNVARVAQWMQQAYKGKF 85 (347)
T ss_dssp CCCCEEEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGTTHHHHHHTSTTCEEEECCHHHHHHHHHHHTTGGGTTSS
T ss_pred CCCcEEEECCceeeEEEecCHHHHHHcCCCCCceEEcCHHHHHHHHHHhccCCeEEecCCHHHHHHHHHHHhcccCCCCe
Confidence 568999999999999999999999999999999999986666666666666778899999999999999999 8771
Q ss_pred CCCCCcceEEEEEeCCCchHHHHHHHHHHcCCCCccccccCCCCceEEEEEcCCCCeEEEEecCcccc
Q 024255 197 IGGPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQVSFQR 264 (270)
Q Consensus 197 ~~~p~~~V~fVG~VGdD~~Ge~I~e~L~e~GVdt~~v~~~~g~TG~~~VLv~~dGeRTiv~~~GAn~~ 264 (270)
|.|+|+||+|.+|+++++.|++.||++.++...+.+|++|+++++ +|+|++++++|++..
T Consensus 86 -------~~~ig~vG~D~~g~~~~~~l~~~GV~~~~~~~~~~~T~~~~i~~~-~g~r~~~~~~ga~~~ 145 (347)
T 3otx_A 86 -------VTYVGCIADDRYGKVLKEAAEHEGIVMAVEHTTKAGSGACAVCIT-GKERTLVADLGAANH 145 (347)
T ss_dssp -------EEEECEECSSHHHHHHHHHHHHHTCEECCEECSSSCEEEEEEEEE-TTEEEEEEEEEGGGG
T ss_pred -------EEEEEEecCChHHHHHHHHHHHCCCceecccCCCCCCeEEEEEEE-CCceeeeechhhhhc
Confidence 599999999999999999999999999998644469999999998 899999999998743
No 5
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae}
Probab=99.85 E-value=2e-21 Score=180.14 Aligned_cols=140 Identities=21% Similarity=0.281 Sum_probs=119.0
Q ss_pred CCCCCCCCcEEEEcCcceeeEeecChhHHHhhccCCCceeeeccccccceeeeccCCccEEecCChHHHHHHHHHHh---
Q 024255 116 ASVLPERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARL--- 192 (270)
Q Consensus 116 ~~~~~~~~~VlvIG~alVDii~~vd~~~pe~~~L~~G~~~lv~~ee~~~l~e~i~~~~~~~~~GGsAaNtAvaLARL--- 192 (270)
.+..+++++|+++|++++|+++.++..|++++++++|.+++.++++.+.+.+.+.+......+||+++|+|+++++|
T Consensus 17 ~~~~~~~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~l~~~~~~p~~~e~~~~~~~~~~~GG~~~N~a~~~~~L~~l 96 (365)
T 3loo_A 17 HMESLRDGMLVGLGNPLLDISAVVEKDLLNKYDMQPNNAILAEEKHMPMYQELIEKYQAEYIAGGSVQNSLRVAQWILQR 96 (365)
T ss_dssp ----CCTTSEEEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGTHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHTC
T ss_pred ccccCCCccEEEECCCeEeEEEecCHHHHHHcCCCCCCceechhHHHHHHHHHhhcCCeEEecCCHHHHHHHHHHHhhcC
Confidence 33345677999999999999999999999999999999998765545555554444467889999999999999988
Q ss_pred CCCCCCCCCcceEEEEEeCCCchHHHHHHHHHHcCCCCccccccCCCCceEEEEEcCCCCeEEEEecCcccc
Q 024255 193 GGKPIGGPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQVSFQR 264 (270)
Q Consensus 193 G~~~~~~p~~~V~fVG~VGdD~~Ge~I~e~L~e~GVdt~~v~~~~g~TG~~~VLv~~dGeRTiv~~~GAn~~ 264 (270)
|.+ +.|+|+||+|.+|+++++.|++.||++.++...+.+|++|+++++ +++|+|+.++|++..
T Consensus 97 G~~--------~~~ig~vG~D~~g~~~~~~l~~~GV~~~~~~~~~~~Tg~~~i~~~-~~~r~~~~~~ga~~~ 159 (365)
T 3loo_A 97 PRT--------AIFFGCVGQDEYARILEERATSNGVNVQYQRSATSPTGTCAVLVT-GTQRSLCANLAAAND 159 (365)
T ss_dssp TTS--------EEEEEEEESBHHHHHHHHHHHHHTCEEEEEEESSSCCEEEEEEEE-TTEEEEEEECGGGGG
T ss_pred CCc--------EEEEEEecCCchHHHHHHHHHHCCCceeccccCCCCCeEEEEEEE-CCceEEEeccchHhh
Confidence 777 699999999999999999999999999998874469999999999 889999999998754
No 6
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A*
Probab=99.79 E-value=3e-19 Score=162.97 Aligned_cols=135 Identities=22% Similarity=0.324 Sum_probs=114.9
Q ss_pred CCCcEEEEcCcceeeEeecChhHHHhhccCCCceeeeccccccceeeeccCCccEEecCChHHHHHHHHHHhC----CCC
Q 024255 121 ERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLG----GKP 196 (270)
Q Consensus 121 ~~~~VlvIG~alVDii~~vd~~~pe~~~L~~G~~~lv~~ee~~~l~e~i~~~~~~~~~GGsAaNtAvaLARLG----~~~ 196 (270)
++++|+++|++++|+++.++..+++++++.+|+..+++.+..+...+.+....+...+||+++|+|++|+||| .+
T Consensus 5 ~~~~v~viG~~~~D~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~lgg~~~~~- 83 (345)
T 1bx4_A 5 RENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGSTQNSIKVAQWMIQQPHKA- 83 (345)
T ss_dssp CTTCEEEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGHHHHHHHHHHSCCEEEEECHHHHHHHHHHHHHCSSTTC-
T ss_pred ccccEEEECCcceeEEEecCHHHHHHcCCCCCcEEEchHHHHHHHHHHhccCCceecCCcHHHHHHHHHHHhcCCCCCc-
Confidence 4568999999999999999987899999999988777544444444444445678899999999999999997 66
Q ss_pred CCCCCcceEEEEEeCCCchHHHHHHHHHHcCCCCccccccCCCCceEEEEEcCCCCeEEEEecCcccc
Q 024255 197 IGGPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQVSFQR 264 (270)
Q Consensus 197 ~~~p~~~V~fVG~VGdD~~Ge~I~e~L~e~GVdt~~v~~~~g~TG~~~VLv~~dGeRTiv~~~GAn~~ 264 (270)
|.|+|.||+|.+|+++++.|++.||++.++...+.+|++++++++ +|+|+++.++|++..
T Consensus 84 -------~~~ig~vG~D~~G~~i~~~L~~~gv~~~~v~~~~~~T~~~~~~~~-~g~r~~~~~~~a~~~ 143 (345)
T 1bx4_A 84 -------ATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCAACIT-GDNRSLIANLAAANC 143 (345)
T ss_dssp -------EEEEEEEESSHHHHHHHHHHHHTTCEEEEEEESSSCCCEEEEEEE-TTEEEEEEECGGGGG
T ss_pred -------EEEEEEeCCChhHHHHHHHHHHcCCceeeeecCCCCCceEEEEEc-CCceEeeeccchHhh
Confidence 799999999999999999999999999998754459999999998 789999999887653
No 7
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A*
Probab=99.79 E-value=1.1e-18 Score=162.41 Aligned_cols=136 Identities=21% Similarity=0.314 Sum_probs=113.0
Q ss_pred CCCCCcEEEEcCcceeeEeecChhHHHhhccCCCceeeeccccccceeeeccCCccEEecCChHHHHHHHHHHh---CCC
Q 024255 119 LPERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARL---GGK 195 (270)
Q Consensus 119 ~~~~~~VlvIG~alVDii~~vd~~~pe~~~L~~G~~~lv~~ee~~~l~e~i~~~~~~~~~GGsAaNtAvaLARL---G~~ 195 (270)
.+++++|+|+|++++|+++.++..+++++++.+|+..++++++.+.+.+. ....+...+||+++|+|++|+|| |.+
T Consensus 29 ~~~~~~vlviG~~~lD~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~-~~~~~~~~~GG~~~NvA~~la~Lg~~g~~ 107 (383)
T 2abs_A 29 ATGPMRVFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTL-DQFNPTSLPGGSALNSVRVVQKLLRKPGS 107 (383)
T ss_dssp -CCCCCEEEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGGGGGGTG-GGGCCEEEEESHHHHHHHHHHHHHCSTTS
T ss_pred CCCCceEEEECcchheeEeccCHHHHHhcCCCCCceeechhhHHHHHHhh-ccccceeeCCChHHHHHHHHHHhccCCCc
Confidence 34567999999999999999987688888888998777654334333332 34467888999999999999999 676
Q ss_pred CCCCCCcceEEEEEeCCCchHHHHHHHHHHcCCCCccccccCCCCceEEEEEcCCCCeEEEEecCcccc
Q 024255 196 PIGGPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQVSFQR 264 (270)
Q Consensus 196 ~~~~p~~~V~fVG~VGdD~~Ge~I~e~L~e~GVdt~~v~~~~g~TG~~~VLv~~dGeRTiv~~~GAn~~ 264 (270)
|.|+|.||+|.+|+++++.|++.||++.++...+.+|++++++++ +|+|+++.+.+++..
T Consensus 108 --------v~~ig~vG~D~~G~~i~~~L~~~GV~~~~v~~~~~~T~~~~~~~~-~g~r~~~~~~~a~~~ 167 (383)
T 2abs_A 108 --------AGYMGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGVCAVLIN-EKERTLCTHLGACGS 167 (383)
T ss_dssp --------EEEEEEECSSHHHHHHHHHHHHHTCEEEEEECTTCCCEEEEEEEE-TTEEEEEEECGGGGG
T ss_pred --------EEEEEEecCChhHHHHHHHHHHcCCceeeeecCCCCCeEEEEEEc-CCceeEeeccChhhh
Confidence 699999999999999999999999999998754469999999998 789999999988754
No 8
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A*
Probab=99.76 E-value=3.6e-18 Score=155.20 Aligned_cols=114 Identities=27% Similarity=0.359 Sum_probs=98.8
Q ss_pred CCcEEEEcCcceeeEeecChhHHHhhccCCCceeeeccccccceeeeccCCccEEecCChHHHHHHHHHHhCCCCCCCCC
Q 024255 122 RWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPA 201 (270)
Q Consensus 122 ~~~VlvIG~alVDii~~vd~~~pe~~~L~~G~~~lv~~ee~~~l~e~i~~~~~~~~~GGsAaNtAvaLARLG~~~~~~p~ 201 (270)
+++|+++|++++|++..++. +| .+|+.. .+..+...+||+++|+|++|+|||.+
T Consensus 19 m~~i~viG~~~iD~~~~v~~-~p-----~~g~~~--------------~~~~~~~~~GG~~~NvA~~la~LG~~------ 72 (310)
T 3go6_A 19 APRVCVVGSVNMDLTFVVDA-LP-----RPGETV--------------LAASLTRTPGGKGANQAVAAARAGAQ------ 72 (310)
T ss_dssp CCEEEEECCCEEEEEEECSS-CC-----CTTCCC--------------CCSEEEEEEECHHHHHHHHHHHTTCE------
T ss_pred cCCEEEECCceEEEEEecCC-CC-----CCCCeE--------------EecceeecCCCHHHHHHHHHHHCCCC------
Confidence 46899999999999999876 54 233321 12357789999999999999999998
Q ss_pred cceEEEEEeCCCchHHHHHHHHHHcCCCCccccccCCCCceEEEEEcCCCCeEEEEecCccc
Q 024255 202 LNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQVSFQ 263 (270)
Q Consensus 202 ~~V~fVG~VGdD~~Ge~I~e~L~e~GVdt~~v~~~~g~TG~~~VLv~~dGeRTiv~~~GAn~ 263 (270)
+.|+|.||+|.+|+++++.|++.||+++++...+.+|++++++++++|+|+++.++|++.
T Consensus 73 --~~~i~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~ 132 (310)
T 3go6_A 73 --VQFSGAFGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANA 132 (310)
T ss_dssp --EEEECEECSSHHHHHHHHHHHHTTCBCTTCEECSSCCEEEEEEECTTSCEEEEEECGGGG
T ss_pred --eEEEEEECCCHHHHHHHHHHHHcCCccceeEecCCCCCEEEEEEcCCCCEEEEecCChhh
Confidence 699999999999999999999999999999765679999999999999999999998764
No 9
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A*
Probab=99.75 E-value=4.3e-18 Score=152.79 Aligned_cols=116 Identities=21% Similarity=0.319 Sum_probs=97.8
Q ss_pred CCCCcEEEEcCcceeeEeecChhHHHhhccCCCceeeeccccccceeeeccCCccEEecCChHHHHHHHHHHhCCCCCCC
Q 024255 120 PERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGG 199 (270)
Q Consensus 120 ~~~~~VlvIG~alVDii~~vd~~~pe~~~L~~G~~~lv~~ee~~~l~e~i~~~~~~~~~GGsAaNtAvaLARLG~~~~~~ 199 (270)
+++.+|+++|++++|++..++. +| ..|.. +....+...+||+++|+|++|+|||.+
T Consensus 2 ~~~~~v~viG~~~iD~~~~~~~-~p-----~~g~~--------------~~~~~~~~~~GG~~~N~A~~la~lG~~---- 57 (309)
T 1rkd_A 2 QNAGSLVVLGSINADHILNLQS-FP-----TPGET--------------VTGNHYQVAFGGKGANQAVAAGRSGAN---- 57 (309)
T ss_dssp --CCEEEEECCCEEEEEEECSS-CC-----CTTCC--------------CCCCCEEEEEECHHHHHHHHHHHHTCE----
T ss_pred CCCCeEEEECcceEeEEEecCC-CC-----CCCCe--------------eecCceeecCCCHHHHHHHHHHhCCCc----
Confidence 3456899999999999999876 54 22321 112356788999999999999999998
Q ss_pred CCcceEEEEEeCCCchHHHHHHHHHHcCCCCccccccC-CCCceEEEEEcCCCCeEEEEecCccc
Q 024255 200 PALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKD-GTTGTVIVLTTPDAQRAMLAYQVSFQ 263 (270)
Q Consensus 200 p~~~V~fVG~VGdD~~Ge~I~e~L~e~GVdt~~v~~~~-g~TG~~~VLv~~dGeRTiv~~~GAn~ 263 (270)
|.|+|.||+|.+|+++++.|++.||++.++.+.. .+|++++++++++|+|++++++|++.
T Consensus 58 ----~~~~~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~ 118 (309)
T 1rkd_A 58 ----IAFIACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIHAGANA 118 (309)
T ss_dssp ----EEEEEEEESSTTHHHHHHHHHTTTEECTTEEEETTCCCEEEEEEECTTSCEEEEEECGGGG
T ss_pred ----eEEEEEECCCHHHHHHHHHHHHcCCCccceEecCCCCCceEEEEECCCCCeEEEEeCCchh
Confidence 6999999999999999999999999999987655 48999999999889999999998864
No 10
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1
Probab=99.75 E-value=5.7e-18 Score=154.45 Aligned_cols=117 Identities=22% Similarity=0.328 Sum_probs=98.0
Q ss_pred CCCCCcEEEEcCcceeeEeecChhHHHhhccCCCceeeeccccccceeeeccCCccEEecCChHHHHHHHHHHhCCCCCC
Q 024255 119 LPERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIG 198 (270)
Q Consensus 119 ~~~~~~VlvIG~alVDii~~vd~~~pe~~~L~~G~~~lv~~ee~~~l~e~i~~~~~~~~~GGsAaNtAvaLARLG~~~~~ 198 (270)
++++++|+++|++++|++..++. +| .+|+. +....+...+||+++|+|++|+|||.+
T Consensus 21 m~~~~~vlviG~~~iD~~~~~~~-~p-----~~g~~--------------~~~~~~~~~~GG~~~NvA~~la~LG~~--- 77 (331)
T 2fv7_A 21 QEEVAAVVVVGSCMTDLVSLTSR-LP-----KTGET--------------IHGHKFFIGFGGKGANQCVQAARLGAM--- 77 (331)
T ss_dssp ---CCSEEEECCCEEEEEEECSS-CC-----CTTCC--------------CCCSEEEEEEECHHHHHHHHHHHTTCC---
T ss_pred ccccCCEEEECcccEEEEEecCC-CC-----CCCce--------------EecCceEECcCCHHHHHHHHHHHCCCC---
Confidence 34556899999999999999876 54 23331 112346788999999999999999998
Q ss_pred CCCcceEEEEEeCCCchHHHHHHHHHHcCCCCccccccC-CCCceEEEEEcCCCCeEEEEecCccc
Q 024255 199 GPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKD-GTTGTVIVLTTPDAQRAMLAYQVSFQ 263 (270)
Q Consensus 199 ~p~~~V~fVG~VGdD~~Ge~I~e~L~e~GVdt~~v~~~~-g~TG~~~VLv~~dGeRTiv~~~GAn~ 263 (270)
|.|+|.||+|.+|+++++.|++.||++.++.+.+ .+|++++++++++|+|++++++|++.
T Consensus 78 -----~~~i~~vG~D~~G~~l~~~L~~~Gv~~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~ga~~ 138 (331)
T 2fv7_A 78 -----TSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNNEGQNIIVIVAGANL 138 (331)
T ss_dssp -----EEEEEEEESSHHHHHHHHHHHTTTEECTTEEEESSSCCEEEEEEECTTSCEEEEEECGGGG
T ss_pred -----eEEEEEECCChhHHHHHHHHHHcCCcceeeEecCCCCCceEEEEECCCCCeEEEecCCccc
Confidence 6999999999999999999999999999988755 58999999999889999999998854
No 11
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus}
Probab=99.74 E-value=9.7e-18 Score=149.86 Aligned_cols=115 Identities=20% Similarity=0.243 Sum_probs=98.5
Q ss_pred CcEEEEcCcceeeEeecChhHHHhhccCCCceeeeccccccceeeeccCCccEEecCChHHHHHHHHHHhCCCCCCCCCc
Q 024255 123 WDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPAL 202 (270)
Q Consensus 123 ~~VlvIG~alVDii~~vd~~~pe~~~L~~G~~~lv~~ee~~~l~e~i~~~~~~~~~GGsAaNtAvaLARLG~~~~~~p~~ 202 (270)
++|+++|++++|+++.++. +| .+|+.. + ....+...+||+++|+|++|+|||.+
T Consensus 3 ~~v~viG~~~~D~~~~~~~-~p-----~~g~~~-~------------~~~~~~~~~GG~~~NvA~~la~lG~~------- 56 (304)
T 3ry7_A 3 NKVVILGSTNVDQFLTVER-YA-----QPGETL-H------------VEEAQKAFGGGKGANQAIATARMQAD------- 56 (304)
T ss_dssp CEEEEECCCEEEEEEECSS-CC-----CTTCCC-C------------CSSCCEEEEECHHHHHHHHHHHTTCE-------
T ss_pred CcEEEEccceeEEEEeccC-CC-----CCCCce-e------------cccceeecCCCHHHHHHHHHHHCCCC-------
Confidence 5799999999999999876 54 233311 0 23457889999999999999999998
Q ss_pred ceEEEEEeCCCchHHHHHHHHHHcCCCCccccccC-CCCceEEEEEcCCCCeEEEEecCcccc
Q 024255 203 NVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKD-GTTGTVIVLTTPDAQRAMLAYQVSFQR 264 (270)
Q Consensus 203 ~V~fVG~VGdD~~Ge~I~e~L~e~GVdt~~v~~~~-g~TG~~~VLv~~dGeRTiv~~~GAn~~ 264 (270)
+.|+|.||+|.+|+++++.|++.||+++++.+.+ .+|++++++++++|+|++++++|++..
T Consensus 57 -~~~~~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~ 118 (304)
T 3ry7_A 57 -TTFITKIGTDGVADFILEDFKVAHIDTSYIIKTAEAKTGQAFITVNAEGQNTIYVYGGANMT 118 (304)
T ss_dssp -EEEECEEESSCTTHHHHHHHHHTTCBCTTCEEESSSCCEEEEEEECSSCCEEEEEECGGGGG
T ss_pred -eEEEEEeCCChHHHHHHHHHHHcCCcchhEEEcCCCCCcEEEEEECCCCCEEEEEecCchhc
Confidence 6999999999999999999999999999997755 599999999999999999999987643
No 12
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A
Probab=99.73 E-value=7.4e-18 Score=151.36 Aligned_cols=114 Identities=18% Similarity=0.225 Sum_probs=97.0
Q ss_pred CcEEEEcCcceeeEeecChhHHHhhccCCCceeeeccccccceeeeccCCccEEecCChHHHHHHHHHHhCCCCCCCCCc
Q 024255 123 WDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPAL 202 (270)
Q Consensus 123 ~~VlvIG~alVDii~~vd~~~pe~~~L~~G~~~lv~~ee~~~l~e~i~~~~~~~~~GGsAaNtAvaLARLG~~~~~~p~~ 202 (270)
.+|+++|++++|++..+++ +| ..|.. .....+...+||+++|+|++|+|||.+
T Consensus 6 ~~i~viG~~~iD~~~~~~~-~p-----~~~~~--------------~~~~~~~~~~GG~~~N~A~~la~LG~~------- 58 (302)
T 2c4e_A 6 EKITCVGHTALDYIFNVEK-FP-----EPNTS--------------IQIPSARKYYGGAAANTAVGIKKLGVN------- 58 (302)
T ss_dssp EEEEEESCCEEEEEEECSS-CC-----CTTCC--------------CCCSCEEEEEECHHHHHHHHHHHTTCE-------
T ss_pred CcEEEECceeEEEEecccc-cC-----CCCce--------------eeecceeecCCCHHHHHHHHHHHCCCc-------
Confidence 4799999999999999876 44 23321 112356788999999999999999998
Q ss_pred ceEEEEEeCCCchHHHHHHHHHHcCCCCccccccCC-CCceEEEEEcCCCCeEEEEecCcccc
Q 024255 203 NVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDG-TTGTVIVLTTPDAQRAMLAYQVSFQR 264 (270)
Q Consensus 203 ~V~fVG~VGdD~~Ge~I~e~L~e~GVdt~~v~~~~g-~TG~~~VLv~~dGeRTiv~~~GAn~~ 264 (270)
+.|+|.||+|.+|+++++.|++.||+++++.+.++ +|++++++++++|+|++++++|++..
T Consensus 59 -~~~i~~vG~D~~g~~i~~~l~~~gv~~~~~~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~ 120 (302)
T 2c4e_A 59 -SELLSCVGYDFKNSGYERYLKNLDINISKLYYSEEEETPKAWIFTDKDNNQITFFLWGAAKH 120 (302)
T ss_dssp -EEEECEECTTTTTSHHHHHHHHTTCBCTTCEECSSSCCCEEEEEECSSCCEECCEECGGGGG
T ss_pred -eEEEEEEeCCCchHHHHHHHHHcCCcccceEeeCCCCCceEEEEECCCCCEEEEEeCChhhh
Confidence 69999999999999999999999999998876554 79999999998999999999987643
No 13
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A
Probab=99.73 E-value=3.2e-17 Score=148.37 Aligned_cols=117 Identities=25% Similarity=0.383 Sum_probs=95.6
Q ss_pred CCCCCcEEEEcCcceeeEeecChhHHHhhccCCCceeeeccccccceeeeccCCccEEecCChHHHHHHHHHHhCCCCCC
Q 024255 119 LPERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIG 198 (270)
Q Consensus 119 ~~~~~~VlvIG~alVDii~~vd~~~pe~~~L~~G~~~lv~~ee~~~l~e~i~~~~~~~~~GGsAaNtAvaLARLG~~~~~ 198 (270)
.+++++|+++|++++|++..++. +| ..++... .......+||+++|+|++|+|||.+
T Consensus 14 ~~~~~~i~viG~~~iD~~~~~~~-~p-----~~~~~~~--------------~~~~~~~~GG~~~NvA~~la~LG~~--- 70 (312)
T 2hlz_A 14 VPRGSQILCVGLVVLDVISLVDK-YP-----KEDSEIR--------------CLSQRWQRGGNASNSCTILSLLGAP--- 70 (312)
T ss_dssp ---CCEEEEESCCEEEEEEEESS-CC-----CTTCEEE--------------CSEEEEEEESHHHHHHHHHHHHTCC---
T ss_pred CCCCCcEEEECcceEEEeecccc-CC-----Cccceee--------------cccceeccCccHHHHHHHHHHcCCc---
Confidence 34567999999999999999876 54 2232111 1245678999999999999999998
Q ss_pred CCCcceEEEEEeCCCchHHHHHHHHHHcCCCCccccccC-CCCceEEEEEc-CCCCeEEEEecCccc
Q 024255 199 GPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKD-GTTGTVIVLTT-PDAQRAMLAYQVSFQ 263 (270)
Q Consensus 199 ~p~~~V~fVG~VGdD~~Ge~I~e~L~e~GVdt~~v~~~~-g~TG~~~VLv~-~dGeRTiv~~~GAn~ 263 (270)
|.|+|+||+|.+|+++++.|+++||+++++.+.+ .+|++++++++ ++|+|+++++++++.
T Consensus 71 -----v~~ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~~~v~~~~g~r~~~~~~~~~~ 132 (312)
T 2hlz_A 71 -----CAFMGSMAPGHVADFVLDDLRRYSVDLRYTVFQTTGSVPIATVIINEASGSRTILYYDRSLP 132 (312)
T ss_dssp -----EEEEEEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCCEEEEEEETTTCCEEEEEECCCCC
T ss_pred -----eEEEEEecCchHHHHHHHHHHHcCCCCccceeccCCCCCeEEEEEECCCCceEEEecCCccc
Confidence 6999999999999999999999999999987764 58899888876 579999999998754
No 14
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str}
Probab=99.72 E-value=2e-17 Score=152.44 Aligned_cols=115 Identities=18% Similarity=0.231 Sum_probs=97.7
Q ss_pred CCCcEEEEcCcceeeEeecChhHHHhhccCCCceeeeccccccceeeeccCCccEEecCChHHHHHHHHHHhCCCCCCCC
Q 024255 121 ERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGP 200 (270)
Q Consensus 121 ~~~~VlvIG~alVDii~~vd~~~pe~~~L~~G~~~lv~~ee~~~l~e~i~~~~~~~~~GGsAaNtAvaLARLG~~~~~~p 200 (270)
++++|+++|++++|+++.++. +| ..++. .....+...+||+++|+|++|+|||.+
T Consensus 28 ~~~~i~viG~~~iD~~~~~~~-~p-----~~~~~--------------~~~~~~~~~~GG~~~NvA~~la~LG~~----- 82 (343)
T 2rbc_A 28 GGKHVLCVGAAVLDTLFRVAD-MP-----KGEGK--------------VLPYEVLQIAEGMASSAAYAVHRMGGR----- 82 (343)
T ss_dssp CCCEEEEESCCEEEEEEECSS-CC-----CSSSC--------------CCCSEEEEEEECHHHHHHHHHHHTTCE-----
T ss_pred cCCeEEEECcceEEEEeecCC-CC-----CCCCe--------------EeeeeeEEcCCcHHHHHHHHHHHcCCc-----
Confidence 345899999999999999876 44 12321 112356788999999999999999998
Q ss_pred CcceEEEEEeCCCchHHHHHHHHHHcCCCCccccccC-CCCceEEEEEcCCCCeEEEEecCccc
Q 024255 201 ALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKD-GTTGTVIVLTTPDAQRAMLAYQVSFQ 263 (270)
Q Consensus 201 ~~~V~fVG~VGdD~~Ge~I~e~L~e~GVdt~~v~~~~-g~TG~~~VLv~~dGeRTiv~~~GAn~ 263 (270)
|.|+|.||+|.+|+++++.|++.||++.++.+.. .+|++++++++++|+|+++.++|++.
T Consensus 83 ---~~~i~~vG~D~~G~~i~~~L~~~GVd~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~~ 143 (343)
T 2rbc_A 83 ---ASLWGAVGDDETGTRILRDLSESGIDTSGMTVAPGARSALSTIIIDNRGERLIVPFYDHRL 143 (343)
T ss_dssp ---EEEECEEESSHHHHHHHHHHHHTTEECTTCEEETTCCCEEEEEEECTTSCEEEEEECCGGG
T ss_pred ---eEEEEEeCCCHHHHHHHHHHHHcCCceeeEEEcCCCCCceEEEEECCCCCEEEEEcCCCcc
Confidence 6999999999999999999999999999987765 48999999999999999998998753
No 15
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A*
Probab=99.72 E-value=8.2e-18 Score=151.39 Aligned_cols=113 Identities=20% Similarity=0.325 Sum_probs=97.3
Q ss_pred CcEEEEcCcceeeEeecChhHHHhhccCCCceeeeccccccceeeeccCCccEEecCChHHHHHHHHHHhCCCCCCCCCc
Q 024255 123 WDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPAL 202 (270)
Q Consensus 123 ~~VlvIG~alVDii~~vd~~~pe~~~L~~G~~~lv~~ee~~~l~e~i~~~~~~~~~GGsAaNtAvaLARLG~~~~~~p~~ 202 (270)
++|+++|++++|+++.++. +| .+|+... +..+...+||+++|+|++|+|||.+
T Consensus 3 ~~i~viG~~~iD~~~~~~~-~p-----~~g~~~~--------------~~~~~~~~GG~~~NvA~~la~lG~~------- 55 (299)
T 3ikh_A 3 LRVYVTGNITVDETWSIPD-IP-----KKGASIH--------------GVKVSQDIGGKGANQAIILSRCGIE------- 55 (299)
T ss_dssp CCEEEECCCEEEEEEECSS-CC-----CTTCEEE--------------CEEEEEEEECHHHHHHHHHHHTTCC-------
T ss_pred ceEEEECceEEEEEEecCC-CC-----CCCCeEE--------------eeeeeeccCCHHHHHHHHHHHCCCC-------
Confidence 4899999999999999877 55 2343222 2346788999999999999999998
Q ss_pred ceEEEEEeCCCchHHHHHHHHHHcCCCCccccccCCCCceEEEEEcCCCCeEEEEecCccc
Q 024255 203 NVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQVSFQ 263 (270)
Q Consensus 203 ~V~fVG~VGdD~~Ge~I~e~L~e~GVdt~~v~~~~g~TG~~~VLv~~dGeRTiv~~~GAn~ 263 (270)
+.|+|.||+|.+|+++++.|++.||+++++...+.+|++++++++++|+|++++++|++.
T Consensus 56 -~~~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~T~~~~~~~~~~g~~~~~~~~~a~~ 115 (299)
T 3ikh_A 56 -TRLIAATGNDSNGAWIRQQIKNEPLMLLPDGHFNQHSDTSIILNSADGDNAIITTTAAAD 115 (299)
T ss_dssp -EEEECCCCSSHHHHHHHHHGGGSSCEEESSSCCSSCCEEEEEECSSSCSCEEEEECHHHH
T ss_pred -eEEEEEECCCHHHHHHHHHHHHcCCceeeeEecCCCCcEEEEEEcCCCCeEEEEeCCccc
Confidence 699999999999999999999999999998644469999999999999999999988753
No 16
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A*
Probab=99.71 E-value=3.1e-17 Score=148.98 Aligned_cols=116 Identities=22% Similarity=0.257 Sum_probs=93.7
Q ss_pred CCCCcEEEEcCcceeeEeecChhHHHhhccCCCceeeeccccccceeeeccCCccEEecCChHHHHHHHHHHhCCCCCCC
Q 024255 120 PERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGG 199 (270)
Q Consensus 120 ~~~~~VlvIG~alVDii~~vd~~~pe~~~L~~G~~~lv~~ee~~~l~e~i~~~~~~~~~GGsAaNtAvaLARLG~~~~~~ 199 (270)
|++++|+|||++++|++.......+. ... ..+...+...+||+++|+|++|+|||.+
T Consensus 3 m~~~~v~~iG~~~~D~~~~~~~~~~~-----~~~--------------~~p~~~~~~~~GG~~~NvA~~la~LG~~---- 59 (325)
T 3h49_A 3 LDNLDVICIGAAIVDIPLQPVSKNIF-----DVD--------------SYPLERIAMTTGGDAINEATIISRLGHR---- 59 (325)
T ss_dssp --CEEEEEESCCEEEEEECSCCGGGG-----GSS--------------CCCCSCCCCEEESHHHHHHHHHHHTTCE----
T ss_pred CCCCeEEEEChhhheeeccCCCCccc-----ccc--------------ccchheeEEccCcHHHHHHHHHHHCCCC----
Confidence 45679999999999998765332211 000 1111245678999999999999999998
Q ss_pred CCcceEEEEEeCCCchHHHHHHHHHHcCCCCccccccC-CCCceEEEEEcCCCCeEEEEecCcc
Q 024255 200 PALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKD-GTTGTVIVLTTPDAQRAMLAYQVSF 262 (270)
Q Consensus 200 p~~~V~fVG~VGdD~~Ge~I~e~L~e~GVdt~~v~~~~-g~TG~~~VLv~~dGeRTiv~~~GAn 262 (270)
|.|+|.||+|.+|+++++.|++.||+++++.+.+ .+|++++++++++|+|+++++++.+
T Consensus 60 ----~~~ig~vG~D~~G~~i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~~g~r~~~~~~~~~ 119 (325)
T 3h49_A 60 ----TALMSRIGKDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGS 119 (325)
T ss_dssp ----EEEECEEESSHHHHHHHHHHHHHTCBCSSCEEETTSCCCEEEEEECTTSCEEEECCTTSH
T ss_pred ----eEEEEEECCChHHHHHHHHHHHcCCceeeEEecCCCCCceEEEEECCCCceeEEeccCcc
Confidence 6999999999999999999999999999987765 4899999999999999999988654
No 17
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A*
Probab=99.71 E-value=5.9e-17 Score=147.62 Aligned_cols=110 Identities=26% Similarity=0.345 Sum_probs=94.1
Q ss_pred CCCCcEEEEcCcceeeEeecChhHHHhhccCCCceeeeccccccceeeeccCCccEEecCChHHHHHHHHHHhCCCCCCC
Q 024255 120 PERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGG 199 (270)
Q Consensus 120 ~~~~~VlvIG~alVDii~~vd~~~pe~~~L~~G~~~lv~~ee~~~l~e~i~~~~~~~~~GGsAaNtAvaLARLG~~~~~~ 199 (270)
.++++|+++|++++|++...+. +| +. +..+...+||+++|+|++|+|||.+
T Consensus 2 ~~~~~v~viG~~~iD~~~~~~~-~~-------~~-----------------~~~~~~~~GG~~~NvA~~la~LG~~---- 52 (338)
T 3ljs_A 2 SLKKTILCFGEALIDMLAQPLV-KK-------GM-----------------PRAFLQCAGGAPANVAVAVARLGGA---- 52 (338)
T ss_dssp --CCEEEEESCCEEEEEECCCS-ST-------TS-----------------CCCEEEEEECHHHHHHHHHHHHTCC----
T ss_pred CCCCCEEEEChhhhheeccCCC-Cc-------cc-----------------hhceeecCCChHHHHHHHHHhCCCC----
Confidence 3567999999999999988765 32 11 1246788999999999999999998
Q ss_pred CCcceEEEEEeCCCchHHHHHHHHHHcCCCCccccccC-CCCceEEEEEcCCCCeEEEEec--Ccc
Q 024255 200 PALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKD-GTTGTVIVLTTPDAQRAMLAYQ--VSF 262 (270)
Q Consensus 200 p~~~V~fVG~VGdD~~Ge~I~e~L~e~GVdt~~v~~~~-g~TG~~~VLv~~dGeRTiv~~~--GAn 262 (270)
|.|+|.||+|.+|+++++.|+++||+++++.+.. .+|++++++++++|+|+|.++. +++
T Consensus 53 ----~~~ig~vG~D~~g~~l~~~l~~~gV~~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~ 114 (338)
T 3ljs_A 53 ----VQFVGMLGSDMFGDFLFDSFAEAGVVTDGIVRTSTAKTALAFVALDAHGERSFSFYRPPAAD 114 (338)
T ss_dssp ----EEEESEEESSHHHHHHHHHHHHHTCBCTTCEEESSSCCCEEEEECCSTTCCEEEEECSSCGG
T ss_pred ----EEEEeeccCCHHHHHHHHHHHHcCCCceeEEEcCCCCceEEEEEECCCCCeEEEEeCCCChh
Confidence 6999999999999999999999999999998755 5899999999989999998876 554
No 18
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens}
Probab=99.70 E-value=8.2e-17 Score=146.37 Aligned_cols=116 Identities=18% Similarity=0.181 Sum_probs=96.5
Q ss_pred CCCCCcEEEEcCcceeeEeecChhHHHhhccCCCceeeeccccccceeeeccCCccEEecCChHHHHHHHHHHhCCCCCC
Q 024255 119 LPERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIG 198 (270)
Q Consensus 119 ~~~~~~VlvIG~alVDii~~vd~~~pe~~~L~~G~~~lv~~ee~~~l~e~i~~~~~~~~~GGsAaNtAvaLARLG~~~~~ 198 (270)
++++.+|+|+|++++|++..++. +| .+|+.... .+...+||+++|+|++|+|||.+
T Consensus 3 ~~~~~~v~viG~~~vD~~~~~~~-~~-----~~g~~~~~---------------~~~~~~GG~~~NvA~~la~LG~~--- 58 (328)
T 3kzh_A 3 LRKEPYLLVFGASVVDVFGFSKA-SY-----RPYNSTPG---------------HVKISFGGVCRNIAENMARVGVN--- 58 (328)
T ss_dssp -CCCCCEEEECCCEEEEEEEESS-CC-----CTTSEEEE---------------EEEEEEECHHHHHHHHHHHTTCC---
T ss_pred CCCCCcEEEECcEEeeeeeccCC-CC-----CCCCCceE---------------EEEEccCcHHHHHHHHHHHcCCC---
Confidence 45678999999999999999876 44 23432211 35788999999999999999998
Q ss_pred CCCcceEEEEEeCCCchHHHHHHHHHHcCCCCccccccCC-CCceEEEEEcCCCCeEEE-EecCccc
Q 024255 199 GPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDG-TTGTVIVLTTPDAQRAML-AYQVSFQ 263 (270)
Q Consensus 199 ~p~~~V~fVG~VGdD~~Ge~I~e~L~e~GVdt~~v~~~~g-~TG~~~VLv~~dGeRTiv-~~~GAn~ 263 (270)
|.|+|.||+|.+|+++++.|++.||+++++.+.++ +|+.++++++++|+|++. ..++++.
T Consensus 59 -----v~~i~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~ 120 (328)
T 3kzh_A 59 -----TNFMSILGNDEHGKSIVEHSKKIGYHMDDSMVIEGGSTPTYLAILDENGEMVSAIADMKSIG 120 (328)
T ss_dssp -----EEEECEECSSHHHHHHHHHHHHHTEECTTCEECTTCCCCEEEEEECTTSCEEEEEEECGGGG
T ss_pred -----cEEEEEecCcHHHHHHHHHHHHcCCCccceEEeCCCCCeeEEEEEcCCCCEEEEEEchhhhh
Confidence 69999999999999999999999999998876654 899999999999999985 4566543
No 19
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728}
Probab=99.69 E-value=7.8e-17 Score=146.17 Aligned_cols=112 Identities=12% Similarity=0.045 Sum_probs=95.1
Q ss_pred CCCcEEEEcCcceeeEeecChhHHHhhccCCCceeeeccccccceeeeccCCccEEecCChHHHHHHHHHHhCCCCCCCC
Q 024255 121 ERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGP 200 (270)
Q Consensus 121 ~~~~VlvIG~alVDii~~vd~~~pe~~~L~~G~~~lv~~ee~~~l~e~i~~~~~~~~~GGsAaNtAvaLARLG~~~~~~p 200 (270)
++.+|+++|++++|++..++. +| +|+... +..+...+||+++|+|++|+|||.+
T Consensus 19 ~~~~v~viG~~~iD~~~~~~~-~p------~g~~~~--------------~~~~~~~~GG~~~NvA~~la~LG~~----- 72 (306)
T 3bf5_A 19 GMRFLAYFGHLNIDVLISVDS-IP------REGSVN--------------VKDLRPRFGGTAGNFAIVAQKFRIP----- 72 (306)
T ss_dssp CCEEEEEECCCEEEEEEECSC-CC------SSEEEE--------------CSEEEEEEEHHHHHHHHHHHHTTCC-----
T ss_pred CCCcEEEECCceEEEEEecCC-CC------CCceEE--------------CcceEecCCChHHHHHHHHHHcCCC-----
Confidence 456899999999999998876 32 233221 2346788999999999999999998
Q ss_pred CcceEEEEEeCCCchHHHHHHHHHHcCCCCccccccC-CCCceEEEEEcCCCCeEEEEecCccc
Q 024255 201 ALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKD-GTTGTVIVLTTPDAQRAMLAYQVSFQ 263 (270)
Q Consensus 201 ~~~V~fVG~VGdD~~Ge~I~e~L~e~GVdt~~v~~~~-g~TG~~~VLv~~dGeRTiv~~~GAn~ 263 (270)
+.|+|.||+| +|+++++.|++.||++.++.+.+ .+|+++++++++ |+|+++.++|++.
T Consensus 73 ---~~~i~~vG~D-~G~~i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~-g~r~~~~~~ga~~ 131 (306)
T 3bf5_A 73 ---FDLYSAVGMK-THREYLAMIESMGINTGHVEKFEDESGPICYIATDG-KKQVSFMHQGAMA 131 (306)
T ss_dssp ---CEEEEEEETT-TCHHHHHHHHHTTCCCTTEEEETTCCCSEEEEEECS-SCEEEEEECTHHH
T ss_pred ---eEEEEEEeCC-hHHHHHHHHHHcCCCchheEecCCCCCceEEEEEcC-CeeEEEEeCChhh
Confidence 5999999999 99999999999999999986655 479999999998 9999999998764
No 20
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A*
Probab=99.69 E-value=2e-16 Score=144.58 Aligned_cols=127 Identities=22% Similarity=0.240 Sum_probs=99.2
Q ss_pred CCCCCCcEEEEcCcceeeEeecChhHHHhhccCCCceeeeccccccceeeeccCCccEEecCChHHHHHHHHHHhCCCCC
Q 024255 118 VLPERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPI 197 (270)
Q Consensus 118 ~~~~~~~VlvIG~alVDii~~vd~~~pe~~~L~~G~~~lv~~ee~~~l~e~i~~~~~~~~~GGsAaNtAvaLARLG~~~~ 197 (270)
.+.+.++|+++|++++|+++.++..+.+++. . ++.++..+++.+..+...+||+++|+|++|+|||.+
T Consensus 6 ~~~~~m~i~v~G~~~~D~~~~~~~~~~~~~~--~--------~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~-- 73 (334)
T 2pkf_A 6 YFQSHMTIAVTGSIATDHLMRFPGRFSEQLL--P--------EHLHKVSLSFLVDDLVMHRGGVAGNMAFAIGVLGGE-- 73 (334)
T ss_dssp SSCCSSEEEEESCCEEEEEEECSSCTHHHHT--T--------SCGGGCCCCCCCSEEEEEEECHHHHHHHHHHHTTCE--
T ss_pred cCccCCeEEEECChhheEEEecChHHhhhhc--h--------hhccccccccccccceecCCChHHHHHHHHHHcCCC--
Confidence 3445568999999999999988432332210 1 112222333334457788999999999999999998
Q ss_pred CCCCcceEEEEEeCCCchHHHHHHHHHHcCCCCccccccC-CCCceEEEEEcCCCCeEEEEecCcccc
Q 024255 198 GGPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKD-GTTGTVIVLTTPDAQRAMLAYQVSFQR 264 (270)
Q Consensus 198 ~~p~~~V~fVG~VGdD~~Ge~I~e~L~e~GVdt~~v~~~~-g~TG~~~VLv~~dGeRTiv~~~GAn~~ 264 (270)
+.|+|.||+| +|+ +++.|++.||+++++.+.+ .+|++++++++++|+|++++++|++..
T Consensus 74 ------~~~i~~vG~D-~g~-i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~ 133 (334)
T 2pkf_A 74 ------VALVGAAGAD-FAD-YRDWLKARGVNCDHVLISETAHTARFTCTTDVDMAQIASFYPGAMSE 133 (334)
T ss_dssp ------EEEECEECGG-GHH-HHHHHHTTTEECTTCEECSSCCCEEEEEEECTTCCEEEEEECGGGGG
T ss_pred ------eEEEEEEeCc-hHH-HHHHHHHCCCceeeeEecCCCCceEEEEEEcCCCCEEEEECCchhhh
Confidence 6999999999 999 9999999999999987665 589999999998899999888887543
No 21
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri}
Probab=99.67 E-value=7.3e-17 Score=145.90 Aligned_cols=100 Identities=18% Similarity=0.198 Sum_probs=84.1
Q ss_pred CcEEEEcCcceeeEeecChhHHHhhccCCCceeeeccccccceeeeccCCccEEecCChHHHHHHHHHHhC----CCCCC
Q 024255 123 WDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLG----GKPIG 198 (270)
Q Consensus 123 ~~VlvIG~alVDii~~vd~~~pe~~~L~~G~~~lv~~ee~~~l~e~i~~~~~~~~~GGsAaNtAvaLARLG----~~~~~ 198 (270)
++|+++|++++|++.... .+...+||+++|+|++|+||| .+
T Consensus 5 ~~i~viG~~~~D~~~~~~--------------------------------~~~~~~GG~~~NvA~~la~LG~~~~~~--- 49 (319)
T 3lhx_A 5 KKIAVIGECMIELSEKGA--------------------------------DVKRGFGGDTLNTSVYIARQVDPAALT--- 49 (319)
T ss_dssp EEEEEESCCEEEEEC-----------------------------------CCEEEEECHHHHHHHHHHTTSCTTTEE---
T ss_pred CceeeechhhhhhccCCC--------------------------------ceEEecCChHHHHHHHHHHcCCCCCCc---
Confidence 489999999999975321 246789999999999999999 66
Q ss_pred CCCcceEEEEEeCCCchHHHHHHHHHHcCCCCccccccCC-CCceEEEEEcCCCCeEEEEecCcc
Q 024255 199 GPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDG-TTGTVIVLTTPDAQRAMLAYQVSF 262 (270)
Q Consensus 199 ~p~~~V~fVG~VGdD~~Ge~I~e~L~e~GVdt~~v~~~~g-~TG~~~VLv~~dGeRTiv~~~GAn 262 (270)
|.|+|.||+|.+|+++++.|+++||+++++.+.++ +|++++++++++|+|+|+++++.+
T Consensus 50 -----~~~ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~i~~~~~g~r~~~~~~~~~ 109 (319)
T 3lhx_A 50 -----VHYVTALGTDSFSQQMLDAWHGENVDTSLTQRMENRLPGLYYIETDSTGERTFYYWRNEA 109 (319)
T ss_dssp -----EEEECEECSSHHHHHHHHHHHTTTEECTTCEECTTCCCCEEEEEC----CCEEEEECTTC
T ss_pred -----EEEEEEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCceEEEEEeCCCCCeeEEEecCCC
Confidence 79999999999999999999999999999877664 899999999989999999998853
No 22
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.67 E-value=2.3e-16 Score=142.96 Aligned_cols=112 Identities=17% Similarity=0.273 Sum_probs=93.8
Q ss_pred CcEEEEcCcceeeEeecChhHHHhhccCCCceeeeccccccceeeeccCCccEEecCChHHHHHHHHHHhCCCCCCCCCc
Q 024255 123 WDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPAL 202 (270)
Q Consensus 123 ~~VlvIG~alVDii~~vd~~~pe~~~L~~G~~~lv~~ee~~~l~e~i~~~~~~~~~GGsAaNtAvaLARLG~~~~~~p~~ 202 (270)
.+|+|+|++++|+++.++. +| .+|+... ...+...+||+++|+|++|+|||.+.
T Consensus 15 ~~v~vvG~~~iD~~~~~~~-~p-----~~g~~~~--------------~~~~~~~~GG~~~NvA~~la~LG~~~------ 68 (311)
T 1vm7_A 15 LVISVVGSSNIDIVLKVDH-FT-----KPGETQK--------------AIEMNVFPGGKGANQAVTVAKIGEKG------ 68 (311)
T ss_dssp CCEEEECCCEEEEEEECSS-CC-----CTTCEEE--------------CSEEEEEEECHHHHHHHHHHHHHSSC------
T ss_pred CCEEEECcceeeEEEeccc-CC-----CCCceEe--------------cCeeeecCCCHHHHHHHHHHHcCCCc------
Confidence 4899999999999999887 54 2343221 23567889999999999999999981
Q ss_pred ceEEEEEeCCCchHHHHHHHHHHcCCCCccccccC-CCCceEEEEEcCCCCeEEEEecCcccc
Q 024255 203 NVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKD-GTTGTVIVLTTPDAQRAMLAYQVSFQR 264 (270)
Q Consensus 203 ~V~fVG~VGdD~~Ge~I~e~L~e~GVdt~~v~~~~-g~TG~~~VLv~~dGeRTiv~~~GAn~~ 264 (270)
+.|+|.||+|.+|+++++.|++.|| ++.+.+ .+|++++++++++|+|+++.++|++..
T Consensus 69 -~~~i~~vG~D~~G~~l~~~L~~~gV---~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~ 127 (311)
T 1vm7_A 69 -CRFVTCIGNDDYSDLLIENYEKLGI---TGYIRVSLPTGRAFIEVDKTGQNRIIIFPGANAE 127 (311)
T ss_dssp -EEEEEEECSSHHHHHHHHHHHHTTE---EEEEECSSCCCEEEEEECTTSCEEEEEECGGGGG
T ss_pred -eEEEEEECCChHHHHHHHHHHHCCC---EEEEcCCCCCeEEEEEECCCCCEEEEEecCcccc
Confidence 4999999999999999999999999 565544 589999999998899999999988643
No 23
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str}
Probab=99.67 E-value=2.4e-16 Score=142.62 Aligned_cols=110 Identities=25% Similarity=0.297 Sum_probs=90.9
Q ss_pred CcEEEEcCcceeeEeecChhHHHhhccCCCceeeeccccccceeeeccCCccEEecCChHHHHHHHHHHhCCCCCCCCCc
Q 024255 123 WDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPAL 202 (270)
Q Consensus 123 ~~VlvIG~alVDii~~vd~~~pe~~~L~~G~~~lv~~ee~~~l~e~i~~~~~~~~~GGsAaNtAvaLARLG~~~~~~p~~ 202 (270)
.+|+++|++++|++..++. .| .+++... . .+...+||+++|+|++|+|||.+
T Consensus 4 ~~i~viG~~~~D~~~~~~~-~~-----~~~~~~~--------------~-~~~~~~GG~~~NvA~~la~LG~~------- 55 (317)
T 2nwh_A 4 KKILVLGGAHIDRRGMIET-ET-----APGASNP--------------G-SWMEEAGGGGFNAARNLSRLGFE------- 55 (317)
T ss_dssp CEEEEESCCEEEEEEEESS-SC-----CTTSCCC--------------E-EEEEEEECHHHHHHHHHHHTTCE-------
T ss_pred CeEEEECchheEEeeccCC-CC-----CCCCCce--------------E-eEEEeCCcHHHHHHHHHHhcCCC-------
Confidence 4799999999999998875 23 2332111 1 25678999999999999999998
Q ss_pred ceEEEEEeCCCchHHHHHHHHHHcCCCCccccccCCCCceEEEEEcCCCCeEEEEecCc
Q 024255 203 NVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQVS 261 (270)
Q Consensus 203 ~V~fVG~VGdD~~Ge~I~e~L~e~GVdt~~v~~~~g~TG~~~VLv~~dGeRTiv~~~GA 261 (270)
+.|+|.||+|.+|+++++.|+++||+++++...+.+|++++++++++|+|+++++.+.
T Consensus 56 -~~~i~~vG~D~~G~~l~~~L~~~gV~~~~~~~~~~~T~~~~~~~~~~g~~~~~~~~~~ 113 (317)
T 2nwh_A 56 -VRIIAPRGGDVTGEVVAEAARQAGVEDTPFTFLDRRTPSYTAILERDGNLVIALADMD 113 (317)
T ss_dssp -EEEECEEESSHHHHHHHHHHHHTTCEECCEEETTSCCCEEEEEECTTSCEEEEEEECG
T ss_pred -cEEEEeecCCchHHHHHHHHHHcCCCCCCcccCCCCCceEEEEEcCCCCEEEEEcchH
Confidence 6999999999999999999999999999943334599999999999999998776643
No 24
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A*
Probab=99.67 E-value=2.7e-16 Score=141.79 Aligned_cols=106 Identities=25% Similarity=0.376 Sum_probs=90.4
Q ss_pred CcEEEEcCcceeeEeecChhHHHhhccCCCceeeeccccccceeeeccCCccEEecCChHHHHHHHHHHhCCCCCCCCCc
Q 024255 123 WDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPAL 202 (270)
Q Consensus 123 ~~VlvIG~alVDii~~vd~~~pe~~~L~~G~~~lv~~ee~~~l~e~i~~~~~~~~~GGsAaNtAvaLARLG~~~~~~p~~ 202 (270)
++|+++|++++|++..... . ......+...+||+++|+|++|+|||.+
T Consensus 2 ~~v~viG~~~iD~~~~~~g-----------~--------------~~~~~~~~~~~GG~~~NvA~~la~LG~~------- 49 (313)
T 3ewm_A 2 SLIASIGELLIDLISVEEG-----------D--------------LKDVRLFEKHPGGAPANVAVGVSRLGVK------- 49 (313)
T ss_dssp CEEEEESCCEEEEEESSSS-----------C--------------TTTCCEEEEEEECHHHHHHHHHHHTTCE-------
T ss_pred CcEEEECceeeeeecCCCC-----------C--------------cccccceeecCCCHHHHHHHHHHHCCCC-------
Confidence 5899999999999965432 1 0112356788999999999999999998
Q ss_pred ceEEEEEeCCCchHHHHHHHHHHcCCCCccccccC-CCCceEEEEEcCCCCeEEEEecCcc
Q 024255 203 NVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKD-GTTGTVIVLTTPDAQRAMLAYQVSF 262 (270)
Q Consensus 203 ~V~fVG~VGdD~~Ge~I~e~L~e~GVdt~~v~~~~-g~TG~~~VLv~~dGeRTiv~~~GAn 262 (270)
|.|+|.||+|.+|+++++.|++.||+++++.+.. .+|+++++++++ |+|+|+++.|.+
T Consensus 50 -~~~ig~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~~~~~~-g~~~~~~~~~~a 108 (313)
T 3ewm_A 50 -SSLISKVGNDPFGEYLIEELSKENVDTRGIVKDEKKHTGIVFVQLKG-ASPSFLLYDDVA 108 (313)
T ss_dssp -EEEEEEEESSHHHHHHHHHHHHTTCBCTTEEEESSSCCEEEEEECSS-SSCEEEECCSSG
T ss_pred -eEEEEEeCCCHHHHHHHHHHHHcCCCccceeecCCCCceEEEEEecC-CCcceEeeccCH
Confidence 6999999999999999999999999999987655 599999999875 999999998854
No 25
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0
Probab=99.67 E-value=1.2e-16 Score=143.96 Aligned_cols=110 Identities=27% Similarity=0.308 Sum_probs=92.2
Q ss_pred CCCCCcEEEEcCcceeeEeecChhHHHhhccCCCceeeeccccccceeeeccCCccEEecCChHHHHHHHHHHhCCCCCC
Q 024255 119 LPERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIG 198 (270)
Q Consensus 119 ~~~~~~VlvIG~alVDii~~vd~~~pe~~~L~~G~~~lv~~ee~~~l~e~i~~~~~~~~~GGsAaNtAvaLARLG~~~~~ 198 (270)
++++++|+++|++++|++...+. .|. . ....+...+||+++|+|++|+|||.+
T Consensus 5 ~~~~~~v~~iG~~~~D~~~~~~~-~p~----~-------------------~~~~~~~~~GG~~~NvA~~la~LG~~--- 57 (319)
T 3pl2_A 5 LTSTHEVLAIGRLGVDIYPLQSG-VGL----A-------------------DVQSFGKYLGGSAANVSVAAARHGHN--- 57 (319)
T ss_dssp --CCCSEEEESCCEEEECBSSSS-CCG----G-------------------GCCCBCCEEECHHHHHHHHHHHTTCC---
T ss_pred cccCCCEEEEChhheeeecccCC-CCc----c-------------------ccceeeecCCCcHHHHHHHHHHCCCc---
Confidence 56778999999999999876544 220 0 01346678999999999999999998
Q ss_pred CCCcceEEEEEeCCCchHHHHHHHHHHcCCCCccccccC-CCCceEEEEEcCCCCeEEEEecC
Q 024255 199 GPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKD-GTTGTVIVLTTPDAQRAMLAYQV 260 (270)
Q Consensus 199 ~p~~~V~fVG~VGdD~~Ge~I~e~L~e~GVdt~~v~~~~-g~TG~~~VLv~~dGeRTiv~~~G 260 (270)
|.|+|.||+|.+|+++++.|++.||+++++.+.. .+|+++++.++++|+|++++|++
T Consensus 58 -----~~~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~ 115 (319)
T 3pl2_A 58 -----SALLSRVGNDPFGEYLLAELERLGVDNQYVATDQTFKTPVTFCEIFPPDDFPLYFYRE 115 (319)
T ss_dssp -----EEEEEEEESSHHHHHHHHHHHHTTEECTTEEEESSSCCCEEEECCBTTTBCCEEEECC
T ss_pred -----eEEEEEeCCCHHHHHHHHHHHHcCCccccEEecCCCCceEEEEEEcCCCCeeEEEecC
Confidence 6999999999999999999999999999987655 49999999998889999998864
No 26
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A*
Probab=99.67 E-value=3.5e-16 Score=142.83 Aligned_cols=121 Identities=17% Similarity=0.163 Sum_probs=96.4
Q ss_pred cEEEEcCcceeeEeecChhHHHhhccCCCceeeeccccccceeeeccCCccEEecCChHHHHHHHHHHhCCCCCCCCCcc
Q 024255 124 DVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPALN 203 (270)
Q Consensus 124 ~VlvIG~alVDii~~vd~~~pe~~~L~~G~~~lv~~ee~~~l~e~i~~~~~~~~~GGsAaNtAvaLARLG~~~~~~p~~~ 203 (270)
+|+++|++++|+++.++..+.+++ .. ++.++..+++.+..+...+||+++|+|++|+|||.+
T Consensus 2 ~i~v~G~~~iD~~~~~~~~~~~~~--~~--------~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~-------- 63 (326)
T 3b1n_A 2 ATLICGSIAYDNIMTFEGRFREHI--LP--------DQVHLINLSFLVPTMRREFGGCAGNIAYALNLLGGD-------- 63 (326)
T ss_dssp CEEEESCCEEEEEEECSSCGGGGC--CT--------TSSSSCEEEEECCSCCCEEECHHHHHHHHHHHTTCC--------
T ss_pred cEEEECcceEEEEEecchhhhhhc--cc--------cccCCCCcceecccceeccCCHHHHHHHHHHHcCCC--------
Confidence 699999999999999843333221 11 122333334444456778999999999999999998
Q ss_pred eEEEEEeCC-CchHHHHHHHHHHcCCCCccccccC-CCCceEEEEEcCCCCeEEEEecCcccc
Q 024255 204 VAMTGSVGS-DPLGGFYRAKLRRANVAFCSEPIKD-GTTGTVIVLTTPDAQRAMLAYQVSFQR 264 (270)
Q Consensus 204 V~fVG~VGd-D~~Ge~I~e~L~e~GVdt~~v~~~~-g~TG~~~VLv~~dGeRTiv~~~GAn~~ 264 (270)
|.|+|.||+ | +|+ +++.|++.||+++++.+.+ .+|++++++++++|+|++.+++|++..
T Consensus 64 ~~~i~~vG~~D-~g~-i~~~L~~~gVd~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~ga~~~ 124 (326)
T 3b1n_A 64 ARMMGTLGAVD-AQP-YLDRMDALGLSREYVRVLPDTYSAQAMITTDLDNNQITAFHPGAMMQ 124 (326)
T ss_dssp EEEEEEEETTT-CHH-HHHHHHHHTCEEEEEEEETTCCCEEEEEEECTTCCCEEEEECGGGGG
T ss_pred eeEEEEECCcC-HHH-HHHHHHHcCCcccceEEcCCCCceEEEEEECCCCceEEEEecChhhh
Confidence 699999999 9 899 9999999999999987665 589999999998899999888887543
No 27
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A*
Probab=99.66 E-value=3e-16 Score=143.38 Aligned_cols=104 Identities=19% Similarity=0.295 Sum_probs=90.6
Q ss_pred CCCCcEEEEcCcceeeEeecChhHHHhhccCCCceeeeccccccceeeeccCCccEEecCChHHHHHHHHHHh--CCCCC
Q 024255 120 PERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARL--GGKPI 197 (270)
Q Consensus 120 ~~~~~VlvIG~alVDii~~vd~~~pe~~~L~~G~~~lv~~ee~~~l~e~i~~~~~~~~~GGsAaNtAvaLARL--G~~~~ 197 (270)
+++++|+++|++++|++.... . ..+...+||+++|+|++|+|| |.+
T Consensus 21 ~~m~~i~viG~~~iD~~~~~~------------~------------------~~~~~~~GG~~~NvA~~la~Lg~G~~-- 68 (328)
T 4e69_A 21 QSMMHILSIGECMAELAPADL------------P------------------GTYRLGFAGDTFNTAWYLARLRPESR-- 68 (328)
T ss_dssp BSSCEEEEESCCEEEEEECSS------------T------------------TEEEEEEECHHHHHHHHHHHHCTTSE--
T ss_pred ccCCcEEEecCcEEEEecCCC------------C------------------CceEEecCCHHHHHHHHHHhcCCCCc--
Confidence 345689999999999997511 0 135678999999999999999 777
Q ss_pred CCCCcceEEEEEeCCCchHHHHHHHHHHcCCCCccccccCC-CCceEEEEEcCCCCeEEEEecCcc
Q 024255 198 GGPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDG-TTGTVIVLTTPDAQRAMLAYQVSF 262 (270)
Q Consensus 198 ~~p~~~V~fVG~VGdD~~Ge~I~e~L~e~GVdt~~v~~~~g-~TG~~~VLv~~dGeRTiv~~~GAn 262 (270)
|.|+|.||+|.+|+++++.|++.||+++++.+.++ +|+.++++++ +|+|+++++++++
T Consensus 69 ------~~~ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~v~~~-~g~r~~~~~~~~~ 127 (328)
T 4e69_A 69 ------ISYFSAIGDDALSQQMRAAMSAAGIDGGGLRVIPGRTVGLYLITLE-QGERSFAYWRGQS 127 (328)
T ss_dssp ------EEEECEECSSHHHHHHHHHHHHTTEECTTCEECTTCCCEEEEEEEE-TTEEEEEEECTTC
T ss_pred ------EEEEEeeCCCHHHHHHHHHHHHcCCccceEEEcCCCCCeEEEEEec-CCceEEEEeCCCC
Confidence 69999999999999999999999999999877664 8999999999 9999999999874
No 28
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii}
Probab=99.65 E-value=3.1e-16 Score=142.50 Aligned_cols=112 Identities=25% Similarity=0.308 Sum_probs=93.5
Q ss_pred CCCcEEEEcCcceeeEeecChhHHHhhccCCCceeeeccccccceeeeccCCccEEecCChHHHHHHHHHHhCCCCCCCC
Q 024255 121 ERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGP 200 (270)
Q Consensus 121 ~~~~VlvIG~alVDii~~vd~~~pe~~~L~~G~~~lv~~ee~~~l~e~i~~~~~~~~~GGsAaNtAvaLARLG~~~~~~p 200 (270)
++++|+++|++++|++...+. +|. . ....+...+||+++|+|++|+|||.+
T Consensus 20 ~~~~v~viG~~~~D~~~~~~~-~p~----~-------------------~~~~~~~~~GG~~~NvA~~la~LG~~----- 70 (327)
T 3hj6_A 20 GDLDVVSLGEILVDMISTEEV-NSL----S-------------------QSREYTRHFGGSPANIAVNLSRLGKK----- 70 (327)
T ss_dssp --CCEEEESCCEEEEECCCCC-SSG----G-------------------GCCEEEEEEECHHHHHHHHHHHTTCC-----
T ss_pred CCCCEEEEccceEEEeccCCC-CCc----c-------------------ccceeeeecCcHHHHHHHHHHHcCCc-----
Confidence 457999999999999987765 331 0 12346788999999999999999998
Q ss_pred CcceEEEEEeCCCchHHHHHHHHHHcCCCCccccccC-CCCceEEEEEcCCCCeEEEEecCccccc
Q 024255 201 ALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKD-GTTGTVIVLTTPDAQRAMLAYQVSFQRS 265 (270)
Q Consensus 201 ~~~V~fVG~VGdD~~Ge~I~e~L~e~GVdt~~v~~~~-g~TG~~~VLv~~dGeRTiv~~~GAn~~~ 265 (270)
|.|+|.||+|.+|+++++.|++.||+++++.+.. .+|+++++..+ +|+|+++++++++...
T Consensus 71 ---~~~ig~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~v~~~-~g~~~~~~~~~a~~~~ 132 (327)
T 3hj6_A 71 ---VALISRLGADAFGNYLLDVLKGEQIITDGIQQDKERRTTIVYVSKS-TRTPDWLPYREADMYL 132 (327)
T ss_dssp ---EEEECEEESSHHHHHHHHHHHHTTCBCTTCEEESSSCCCEEEECCC-TTCCCEEEECSGGGGC
T ss_pred ---EEEEEEeCCCHHHHHHHHHHHHcCCCcccEEEcCCCCceEEEEEec-CCCccEEEecChhhhC
Confidence 6999999999999999999999999999997655 58999888876 6999999999876543
No 29
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A*
Probab=99.65 E-value=8.7e-16 Score=138.24 Aligned_cols=104 Identities=18% Similarity=0.250 Sum_probs=88.3
Q ss_pred CcEEEEcCcceeeEeecChhHHHhhccCCCceeeeccccccceeeeccCCccEEecCChHHHHHHHHHHhCCCCCCCCCc
Q 024255 123 WDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPAL 202 (270)
Q Consensus 123 ~~VlvIG~alVDii~~vd~~~pe~~~L~~G~~~lv~~ee~~~l~e~i~~~~~~~~~GGsAaNtAvaLARLG~~~~~~p~~ 202 (270)
++|+++|++++|++.... +.. .....+...+||+++|+|++|+|||.+
T Consensus 2 ~~v~viG~~~~D~~~~~~-----------~~~--------------~~~~~~~~~~GG~~~N~A~~la~LG~~------- 49 (313)
T 2v78_A 2 VDVIALGEPLIQFNSFNP-----------GPL--------------RFVNYFEKHVAGSELNFCIAVVRNHLS------- 49 (313)
T ss_dssp CCEEEECCCEEEEEESSS-----------SCG--------------GGCCEEEEEEECHHHHHHHHHHHTTCC-------
T ss_pred CeEEEECcceEEEecCCC-----------Ccc--------------cccceeEecCCChHHHHHHHHHHCCCc-------
Confidence 479999999999996322 110 112346788999999999999999998
Q ss_pred ceEEEEEeCCCchHHHHHHHHHHcCCCCccccccC-CCCceEEEE--EcCCCCeEEEEec
Q 024255 203 NVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKD-GTTGTVIVL--TTPDAQRAMLAYQ 259 (270)
Q Consensus 203 ~V~fVG~VGdD~~Ge~I~e~L~e~GVdt~~v~~~~-g~TG~~~VL--v~~dGeRTiv~~~ 259 (270)
+.|+|.||+|.+|+++++.|++.||+++++.+.+ .+|++++++ ++++|+|++++++
T Consensus 50 -~~~i~~vG~D~~g~~~~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~~~g~~~~~~~~ 108 (313)
T 2v78_A 50 -CSLIARVGNDEFGKNIIEYSRAQGIDTSHIKVDNESFTGIYFIQRGYPIPMKSELVYYR 108 (313)
T ss_dssp -EEEEEEEESSHHHHHHHHHHHHTTCBCTTEEEETTSCCCEEEEEESSSSTTCEEEEEEC
T ss_pred -EEEEEEeCCCHHHHHHHHHHHHcCCcCceEEEcCCCCceEEEEEEecCCCCCeeEEEeC
Confidence 6999999999999999999999999999987755 489999999 8888999998876
No 30
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A*
Probab=99.64 E-value=9.9e-16 Score=137.50 Aligned_cols=104 Identities=19% Similarity=0.290 Sum_probs=88.3
Q ss_pred CcEEEEcCcceeeEeecChhHHHhhccCCCceeeeccccccceeeeccCCccEEecCChHHHHHHHHHHhCCCCCCCCCc
Q 024255 123 WDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPAL 202 (270)
Q Consensus 123 ~~VlvIG~alVDii~~vd~~~pe~~~L~~G~~~lv~~ee~~~l~e~i~~~~~~~~~GGsAaNtAvaLARLG~~~~~~p~~ 202 (270)
.+|+++|++++|++..... .. .....+...+||+++|+|++|+|||.+
T Consensus 2 ~~v~viG~~~~D~~~~~~~-----------~~--------------~~~~~~~~~~GG~~~NvA~~la~LG~~------- 49 (311)
T 2dcn_A 2 AKLITLGEILIEFNALSPG-----------PL--------------RHVSYFEKHVAGSEANYCVAFIKQGNE------- 49 (311)
T ss_dssp CEEEEESCCEEEEEESSSS-----------CG--------------GGCCEEEEEEECHHHHHHHHHHHTTCE-------
T ss_pred CCEEEECCceEEEecCCCC-----------cc--------------cccceeeecCCChHHHHHHHHHHCCCc-------
Confidence 4799999999999873221 10 112346778999999999999999998
Q ss_pred ceEEEEEeCCCchHHHHHHHHHHcCCCCccccccC-CCCceEEEEEcCCCC--eEEEEec
Q 024255 203 NVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKD-GTTGTVIVLTTPDAQ--RAMLAYQ 259 (270)
Q Consensus 203 ~V~fVG~VGdD~~Ge~I~e~L~e~GVdt~~v~~~~-g~TG~~~VLv~~dGe--RTiv~~~ 259 (270)
+.|+|.||+|.+|+++++.|++.||+++++.+.+ .+|++++++++++|+ |++++++
T Consensus 50 -~~~~~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~ 108 (311)
T 2dcn_A 50 -CGIIAKVGDDEFGYNAIEWLRGQGVDVSHMKIDPSAPTGIFFIQRHYPVPLKSESIYYR 108 (311)
T ss_dssp -EEEECEEESSHHHHHHHHHHHHTTCBCTTCEEETTSCCCEEEEEESCSSTTCEEEEEEC
T ss_pred -eEEEEEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCceEEEEEECCCCCccceEEEec
Confidence 6999999999999999999999999999988755 489999999998899 9998875
No 31
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A*
Probab=99.64 E-value=4.6e-16 Score=142.76 Aligned_cols=105 Identities=28% Similarity=0.343 Sum_probs=82.2
Q ss_pred CCCCcEEEEcCcceeeEeecChhHHHhhccCCCceeeeccccccceeeeccCCccEEecCChHHHHHHHHHHhCCCCCCC
Q 024255 120 PERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGG 199 (270)
Q Consensus 120 ~~~~~VlvIG~alVDii~~vd~~~pe~~~L~~G~~~lv~~ee~~~l~e~i~~~~~~~~~GGsAaNtAvaLARLG~~~~~~ 199 (270)
+++.+|+++|++++|++.... ..+...+||+++|+|++|+|||.+
T Consensus 22 ~~m~~ilviG~~~~D~~~~~~-------------------------------~~~~~~~GG~~~NvA~~la~LG~~---- 66 (339)
T 1tyy_A 22 KAMNKVWVIGDASVDLVPEKQ-------------------------------NSYLKCPGGASANVGVCVARLGGE---- 66 (339)
T ss_dssp ---CCEEEESCCEEEEEECSS-------------------------------SEEEEEEECHHHHHHHHHHHTTCC----
T ss_pred cccCCEEEECcceeEEeccCC-------------------------------CceEEcCCCHHHHHHHHHHHcCCC----
Confidence 444589999999999987531 124568999999999999999998
Q ss_pred CCcceEEEEEeCCCchHHHHHHHHHHcCCCCccccccC-CCCceEEEEEcCCCCeEEEEec--Cccc
Q 024255 200 PALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKD-GTTGTVIVLTTPDAQRAMLAYQ--VSFQ 263 (270)
Q Consensus 200 p~~~V~fVG~VGdD~~Ge~I~e~L~e~GVdt~~v~~~~-g~TG~~~VLv~~dGeRTiv~~~--GAn~ 263 (270)
|.|+|.||+|.+|+++++.|++.||++.++.+.. .+|++++++++++|+|+|+++. +++.
T Consensus 67 ----~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~ 129 (339)
T 1tyy_A 67 ----CGFIGCLGDDDAGRFLRQVFQDNGVDVTFLRLDADLTSAVLIVNLTADGERSFTYLVHPGADT 129 (339)
T ss_dssp ----EEEEEEECSSHHHHHHHHHHHTTTEECTTEEECTTSCCCEEEEC-------CEEECCSSCGGG
T ss_pred ----eEEEEeeCCCHHHHHHHHHHHHcCCCchheEecCCCCCeEEEEEEcCCCCeEEEEecCCChhh
Confidence 6999999999999999999999999999987755 4899999999888999988876 5543
No 32
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A
Probab=99.64 E-value=1.5e-15 Score=136.44 Aligned_cols=104 Identities=29% Similarity=0.360 Sum_probs=87.6
Q ss_pred CcEEEEcCcceeeEeecChhHHHhhccCCCceeeeccccccceeeeccCCccEEecCChHHHHHHHHHHhCCCCCCCCCc
Q 024255 123 WDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPAL 202 (270)
Q Consensus 123 ~~VlvIG~alVDii~~vd~~~pe~~~L~~G~~~lv~~ee~~~l~e~i~~~~~~~~~GGsAaNtAvaLARLG~~~~~~p~~ 202 (270)
++|+++|++++|++..... .. .....+...+||+++|+|++|+|||.+
T Consensus 2 ~~i~viG~~~~D~~~~~~~-----------~~--------------~~~~~~~~~~GG~~~NvA~~la~LG~~------- 49 (309)
T 1v1a_A 2 LEVVTAGEPLVALVPQEPG-----------HL--------------RGKRLLEVYVGGAEVNVAVALARLGVK------- 49 (309)
T ss_dssp CSEEEESCCEEEEECSSSS-----------CG--------------GGCCEEEEEEECHHHHHHHHHHHHTCC-------
T ss_pred CcEEEEccceEEEecCCCC-----------cc--------------cchheeeeecCcHHHHHHHHHHHcCCC-------
Confidence 4799999999999853221 10 112346778999999999999999998
Q ss_pred ceEEEEEeCCCchHHHHHHHHHHcCCCCccccccCCCCceEEEEEcCCCCeEEEEec
Q 024255 203 NVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQ 259 (270)
Q Consensus 203 ~V~fVG~VGdD~~Ge~I~e~L~e~GVdt~~v~~~~g~TG~~~VLv~~dGeRTiv~~~ 259 (270)
+.|+|.||+|.+|+++++.|++.||++.++.+.+++|++++++++++|+|++++++
T Consensus 50 -~~~~~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~t~~~~~~~~~~g~~~~~~~~ 105 (309)
T 1v1a_A 50 -VGFVGRVGEDELGAMVEERLRAEGVDLTHFRRAPGFTGLYLREYLPLGQGRVFYYR 105 (309)
T ss_dssp -EEEEEEECSSHHHHHHHHHHHHHTCBCTTEEECSSCCCEEEEEECTTSCEEEEEEC
T ss_pred -eEEEEEeCCCHHHHHHHHHHHHcCCCCceEEEcCCCCEEEEEEECCCCCceEEEeC
Confidence 69999999999999999999999999999876544999999999888999998776
No 33
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP}
Probab=99.64 E-value=6.3e-16 Score=141.44 Aligned_cols=104 Identities=20% Similarity=0.286 Sum_probs=85.4
Q ss_pred CCCCcEEEEcCcceeeEeecChhHHHhhccCCCceeeeccccccceeeeccCCccEEecCChHHHHHHHHHHhCCCCCCC
Q 024255 120 PERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGG 199 (270)
Q Consensus 120 ~~~~~VlvIG~alVDii~~vd~~~pe~~~L~~G~~~lv~~ee~~~l~e~i~~~~~~~~~GGsAaNtAvaLARLG~~~~~~ 199 (270)
.++++|+|+|++++|++..... . ......+...+||+++|+|++|+|||.+
T Consensus 24 ~~~~~vlviG~~~iD~~~~~~g-----------~--------------~~~~~~~~~~~GG~~~NvA~~la~LG~~---- 74 (336)
T 4du5_A 24 TSALDVITFGEAMMLLVADRPG-----------P--------------LEHAEAFHKRTAGAETNVAIGLARLGLK---- 74 (336)
T ss_dssp --CEEEEEECCCEEEEEESSSS-----------C--------------GGGCCEEEEEEECHHHHHHHHHHHTTCC----
T ss_pred CCCCCEEEEChhhhhccCCCCC-----------c--------------cchhhheeecCCCHHHHHHHHHHhCCCc----
Confidence 3557999999999999975432 1 0112356788999999999999999998
Q ss_pred CCcceEEEEEeCCCchHHHHHHHHHHcCCCCccccccC-CCCceEEEEEcCCCCeEEE
Q 024255 200 PALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKD-GTTGTVIVLTTPDAQRAML 256 (270)
Q Consensus 200 p~~~V~fVG~VGdD~~Ge~I~e~L~e~GVdt~~v~~~~-g~TG~~~VLv~~dGeRTiv 256 (270)
|.|+|.||+|.+|+++++.|++.||+++++.+.+ .+|++++++++++|+++++
T Consensus 75 ----~~~ig~vG~D~~G~~i~~~L~~~GV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~ 128 (336)
T 4du5_A 75 ----VGWASRLGTDSMGRYLLAAMAAEGIDCSHVVCDATQKTGFQFKGKVTDGSDPPV 128 (336)
T ss_dssp ----EEEEEEECSSHHHHHHHHHHHTTTCEEEEEEECTTSCCCEEEECCCSCC--CCE
T ss_pred ----EEEEEEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCcEEEEEEEcCCCCcceE
Confidence 6999999999999999999999999999987766 4999999999988966554
No 34
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125}
Probab=99.62 E-value=2.8e-15 Score=135.69 Aligned_cols=109 Identities=19% Similarity=0.367 Sum_probs=90.8
Q ss_pred CCCCcEEEEcCcceeeEeecChhHHHhhccCCCceeeeccccccceeeeccCCccEEecCChHHHHHHHHHHhCCCCCCC
Q 024255 120 PERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGG 199 (270)
Q Consensus 120 ~~~~~VlvIG~alVDii~~vd~~~pe~~~L~~G~~~lv~~ee~~~l~e~i~~~~~~~~~GGsAaNtAvaLARLG~~~~~~ 199 (270)
+++++|+++|++++|++..... .+. . ....+...+||+++|+|++|+|||.+
T Consensus 9 ~~~~~i~viG~~~~D~~~~~~~-~~~-------~----------------~~~~~~~~~GG~~~NvA~~la~LG~~---- 60 (332)
T 2qcv_A 9 DREFDLIAIGRACIDLNAVEYN-RPM-------E----------------ETMTFSKYVGGSPANIVIGSSKLGLK---- 60 (332)
T ss_dssp CCSEEEEEESCCEEEEEESSCS-SCG-------G----------------GCCCEEEEEESHHHHHHHHHHHTTCC----
T ss_pred ccCCcEEEECcceEEEecCCCC-CCc-------c----------------ccceeEecCCCHHHHHHHHHHHcCCc----
Confidence 4557999999999999987543 110 0 01346788999999999999999998
Q ss_pred CCcceEEEEEeCCCchHHHHHHHHHHcCCCCccccccC--CCCceEEEEEcCCCCeEEEEecC
Q 024255 200 PALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKD--GTTGTVIVLTTPDAQRAMLAYQV 260 (270)
Q Consensus 200 p~~~V~fVG~VGdD~~Ge~I~e~L~e~GVdt~~v~~~~--g~TG~~~VLv~~dGeRTiv~~~G 260 (270)
+.|+|.||+|.+|+++++.|++.||+++++.+.+ .+|+++++.++.+|+|++++++.
T Consensus 61 ----~~~i~~vG~D~~G~~l~~~L~~~gV~~~~v~~~~~~~~t~~~~v~~~~~g~~~~~~~~~ 119 (332)
T 2qcv_A 61 ----AGFIGKIADDQHGRFIESYMRGVGVDTSNLVVDQEGHKTGLAFTEIKSPEECSILMYRQ 119 (332)
T ss_dssp ----EEEEEEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCCCEEEEEEEETTEEEEEEECT
T ss_pred ----eEEEEEeCCCHHHHHHHHHHHHcCCCCcceEecCCCCCceEEEEEEcCCCCccEEEECC
Confidence 6999999999999999999999999999987654 38999999887778898888764
No 35
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis}
Probab=99.62 E-value=2.2e-15 Score=137.38 Aligned_cols=103 Identities=17% Similarity=0.141 Sum_probs=86.5
Q ss_pred CcEEEEcCcceeeEeecChhHHHhhccCCCceeeeccccccceeeeccCCccEEecCChHHHHHHHHHHhCCCCCCCCCc
Q 024255 123 WDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPAL 202 (270)
Q Consensus 123 ~~VlvIG~alVDii~~vd~~~pe~~~L~~G~~~lv~~ee~~~l~e~i~~~~~~~~~GGsAaNtAvaLARLG~~~~~~p~~ 202 (270)
++|+++|++++|++.... +. ...+..+...+||+++|+|++|+|||.+
T Consensus 3 ~~v~viG~~~~D~~~~~~-----------~~--------------~~~~~~~~~~~GG~~~NvA~~la~LG~~------- 50 (346)
T 3ktn_A 3 LKIAAFGEVMLRFTPPEY-----------LM--------------LEQTEQLRMNFVGTGVNLLANLAHFQLE------- 50 (346)
T ss_dssp CEEEEECCCEEEEECSTT-----------CC--------------TTTCSCCEEEEECHHHHHHHHHHHTTCE-------
T ss_pred CcEEEeChhhhhhcCCCC-----------Cc--------------ccccceeEEeccCHHHHHHHHHHHcCCC-------
Confidence 589999999999984211 11 1112457889999999999999999998
Q ss_pred ceEEEEEeCCCchHHHHHHHHHHcCCCCccccccCCCCceEEEEEcCCCCeEEEEe
Q 024255 203 NVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAY 258 (270)
Q Consensus 203 ~V~fVG~VGdD~~Ge~I~e~L~e~GVdt~~v~~~~g~TG~~~VLv~~dGeRTiv~~ 258 (270)
|.|+|.||+|.+|+++++.|++.||+++++...+.+|+++++.++++++|+++.|
T Consensus 51 -~~~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~t~~~~~~~~~~~~~~~~~~ 105 (346)
T 3ktn_A 51 -TALITKLPANRLGEAGKAALRKLGISDQWVGEKGDHIGSFFAEMGYGIRPTQVTY 105 (346)
T ss_dssp -EEEEEEECSSHHHHHHHHHHHHTTCBCTTEEECCSCCEEEEEECCBTTBCCEEEE
T ss_pred -eEEEEecCCCHHHHHHHHHHHHcCCcceEEEeCCCceEEEEEEecCCCCCceEEe
Confidence 6999999999999999999999999999988765699999999876666688887
No 36
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A
Probab=99.61 E-value=2.7e-15 Score=136.40 Aligned_cols=107 Identities=17% Similarity=0.188 Sum_probs=83.9
Q ss_pred CCcEEEEcCcceeeEeecChhHHHhhccCCCceeeeccccccceeeeccCCccEEecCChHHHHHHHHHHhCCCCCCCCC
Q 024255 122 RWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPA 201 (270)
Q Consensus 122 ~~~VlvIG~alVDii~~vd~~~pe~~~L~~G~~~lv~~ee~~~l~e~i~~~~~~~~~GGsAaNtAvaLARLG~~~~~~p~ 201 (270)
+++|+++|++++|++..... .+. .. ........+||+++|+|++|+|||.+
T Consensus 3 m~~i~viG~~~~D~~~~~~~---------~~~--~~------------~~~~~~~~~GG~~~NvA~~la~LG~~------ 53 (330)
T 3iq0_A 3 LSKVFTIGEILVEIMASKIG---------QPF--DQ------------PGIWNGPYPSGAPAIFIDQVTRLGVP------ 53 (330)
T ss_dssp -CEEEEESCCEEEEEEEEET---------CCS--SS------------CEEEEEEEEECHHHHHHHHHHHTTCC------
T ss_pred CCCEEEEcceeEEEeccCCC---------CCc--cc------------cccccCcCCCCHHHHHHHHHHHCCCc------
Confidence 45899999999999986322 110 00 00123567999999999999999998
Q ss_pred cceEEEEEeCCCchHHHHHHHHHHcCCCCccccccC-CCCceEEEEEcCCCCeEEEEec
Q 024255 202 LNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKD-GTTGTVIVLTTPDAQRAMLAYQ 259 (270)
Q Consensus 202 ~~V~fVG~VGdD~~Ge~I~e~L~e~GVdt~~v~~~~-g~TG~~~VLv~~dGeRTiv~~~ 259 (270)
|.|+|.||+|.+|+++++.|++.||+++++.+.. .+|++++++++++|+|++.++.
T Consensus 54 --~~~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~i~~~~~g~~~~~~~~ 110 (330)
T 3iq0_A 54 --CGIISCVGNDGFGDINIHRLAADGVDIRGISVLPLEATGSAFVTYHNSGDRDFIFNI 110 (330)
T ss_dssp --EEEEEEEESSHHHHHHHHHHHHTTCBCTTEEEETTSCCEEEEEEECC---CEEEEEC
T ss_pred --EEEEEEeCCChHHHHHHHHHHHcCCCeeeEEEcCCCCceEEEEEECCCCCeeEEEec
Confidence 6999999999999999999999999999997665 5999999999999999665543
No 37
>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601}
Probab=99.59 E-value=3.5e-15 Score=136.32 Aligned_cols=106 Identities=18% Similarity=0.204 Sum_probs=83.2
Q ss_pred CcEEEEcCcceeeEeecChhHHHhhccCCCceeeeccccccceeeeccCCccEEecCChHHHHHHHHHHhCCCCCCCCCc
Q 024255 123 WDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPAL 202 (270)
Q Consensus 123 ~~VlvIG~alVDii~~vd~~~pe~~~L~~G~~~lv~~ee~~~l~e~i~~~~~~~~~GGsAaNtAvaLARLG~~~~~~p~~ 202 (270)
.+|++||++++|+....... +. .+..+...+||+++|+|++|+|||.+
T Consensus 25 ~kv~~~GE~m~~l~p~~~~~-------------~~------------~~~~~~~~~GG~~aNvA~~larLG~~------- 72 (351)
T 4gm6_A 25 KQVVTIGELLMRLSTQQGIP-------------FS------------QTTALDIHIGGAEANVAVNLSKLGHP------- 72 (351)
T ss_dssp CEEEEECCCEEEEECCTTCC-------------GG------------GCSEEEEEEECHHHHHHHHHHHTTCC-------
T ss_pred CCEEEEcceeEEecCCCCCC-------------cc------------ccCeEEEecCChHHHHHHHHHHcCCC-------
Confidence 48999999999987432210 11 12357889999999999999999999
Q ss_pred ceEEEEEeCCCchHHHHHHHHHHcCCCCccccccCCCCceE-EEEEcCCCCeEEEEecCc
Q 024255 203 NVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTV-IVLTTPDAQRAMLAYQVS 261 (270)
Q Consensus 203 ~V~fVG~VGdD~~Ge~I~e~L~e~GVdt~~v~~~~g~TG~~-~VLv~~dGeRTiv~~~GA 261 (270)
|.|+|+||+|.+|+++++.|+++||+++++.+.+..|+.+ ++..+..+++++++++..
T Consensus 73 -~~~ig~vG~D~~G~~l~~~L~~~GVdt~~v~~~~~~~t~~~~~~~~~~~~~~~~~~~~~ 131 (351)
T 4gm6_A 73 -TRIATVVPANPIGKMAVEHLWRHQVDTAFVVEAGDRLGTYYLESGTALKAPSVVYDRQH 131 (351)
T ss_dssp -EEEEEEECSSHHHHHHHHHHHHTTEECTTEEECSSCCCEEEEECCBTTBCCEEEEECTT
T ss_pred -eEEEEEeCCCHHHHHHHHHHHHcCCCcccccccCCccceeEEEEccCCcceEEEEcccc
Confidence 6999999999999999999999999999998776644444 444455667777766543
No 38
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.57 E-value=8.2e-15 Score=133.57 Aligned_cols=113 Identities=18% Similarity=0.190 Sum_probs=93.8
Q ss_pred CCcEEEEcCcceeeEeecChhHHHhhccCCCceeeeccccccceeeeccCCccEEecCChHHHHHHHHHHhCCCCCCCCC
Q 024255 122 RWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPA 201 (270)
Q Consensus 122 ~~~VlvIG~alVDii~~vd~~~pe~~~L~~G~~~lv~~ee~~~l~e~i~~~~~~~~~GGsAaNtAvaLARLG~~~~~~p~ 201 (270)
.+.|+++|++++|+++.++. | .+|+...++ ....+...+||+++|+|++|+|||.+
T Consensus 12 ~~~~~v~G~~~vD~~~~~~~--~-----~~g~~~~~s-----------~~~~~~~~~GG~~~NvA~~la~LG~~------ 67 (331)
T 2ajr_A 12 HMVLTVTLNPALDREIFIED--F-----QVNRLYRIN-----------DLSKTQMSPGGKGINVSIALSKLGVP------ 67 (331)
T ss_dssp CCEEEEESSCEEEEEEECTT--C-----CSSCEEECC-----------SGGGEEEEEESHHHHHHHHHHHTTCC------
T ss_pred ceEEEEecchHHeEEEEcCC--c-----cCCceEEec-----------cccceEEecCcHHHHHHHHHHHcCCC------
Confidence 46899999999999999886 2 355533320 01356788999999999999999998
Q ss_pred cceEEEEEeCCCchHHHHHHHHHHcC--CCCccccccCCCCceEEEEEcCCCCe-EEEEecCcc
Q 024255 202 LNVAMTGSVGSDPLGGFYRAKLRRAN--VAFCSEPIKDGTTGTVIVLTTPDAQR-AMLAYQVSF 262 (270)
Q Consensus 202 ~~V~fVG~VGdD~~Ge~I~e~L~e~G--Vdt~~v~~~~g~TG~~~VLv~~dGeR-Tiv~~~GAn 262 (270)
|.|+|.||+| +|+++++.|++.| |+++++...+ .|++++++++++|+| +++..+|++
T Consensus 68 --~~~~~~vG~d-~G~~i~~~L~~~g~~V~~~~v~~~~-~t~~~~~~v~~~g~~~~~~~~~g~~ 127 (331)
T 2ajr_A 68 --SVATGFVGGY-MGKILVEELRKISKLITTNFVYVEG-ETRENIEIIDEKNKTITAINFPGPD 127 (331)
T ss_dssp --EEEEEEEEHH-HHHHHHHHHHHHCTTEEEEEEEESS-CCEEEEEEEETTTTEEEEEECCCCC
T ss_pred --eEEEEEecCc-hHHHHHHHHHHcCCccceEEEEcCC-CCeEEEEEEeCCCceEEEEeCCCCC
Confidence 6999999998 9999999999999 9999887544 599999999888999 887778763
No 39
>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A*
Probab=99.57 E-value=1.3e-14 Score=130.18 Aligned_cols=108 Identities=17% Similarity=0.135 Sum_probs=90.0
Q ss_pred cEEEE-cCcceeeEeecChhHHHhhccCCCceeeeccccccceeeeccCCccEEecCChHHHHHHHHHHhCCCCCCCCCc
Q 024255 124 DVLGL-GQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPAL 202 (270)
Q Consensus 124 ~VlvI-G~alVDii~~vd~~~pe~~~L~~G~~~lv~~ee~~~l~e~i~~~~~~~~~GGsAaNtAvaLARLG~~~~~~p~~ 202 (270)
+|+++ |++++|+++.++. + .+|+...+ ..+...+||+++|+|++|+|||.+
T Consensus 3 ~I~~v~g~~~~D~~~~~~~-~------~~g~~~~~--------------~~~~~~~GG~~~NvA~~la~LG~~------- 54 (309)
T 3cqd_A 3 RIYTLTLAPSLDSATITPQ-I------YPEGKLRC--------------TAPVFEPGGGGINVARAIAHLGGS------- 54 (309)
T ss_dssp CEEEECSSCEEEEEEEESC-C------CSSSEEEC--------------CCCEEEEESHHHHHHHHHHHTTCC-------
T ss_pred eEEEEeccchheEEEEcCC-C------cCCCeeec--------------cceeecCCchHHHHHHHHHHcCCC-------
Confidence 57755 5999999999886 2 24543222 356788999999999999999998
Q ss_pred ceEEEEEeCCCchHHHHHHHHHHcCCCCccccccCCCCceEEEE-EcCCCCeEEEEecCcc
Q 024255 203 NVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVL-TTPDAQRAMLAYQVSF 262 (270)
Q Consensus 203 ~V~fVG~VGdD~~Ge~I~e~L~e~GVdt~~v~~~~g~TG~~~VL-v~~dGeRTiv~~~GAn 262 (270)
+.|+|.||+| +|+++++.|++.||+++++.... .|++++++ ++++|+|+++..+|++
T Consensus 55 -~~~i~~vG~d-~g~~i~~~l~~~gv~~~~v~~~~-~t~~~~~~~~~~~g~~~~~~~~g~~ 112 (309)
T 3cqd_A 55 -ATAIFPAGGA-TGEHLVSLLADENVPVATVEAKD-WTRQNLHVHVEASGEQYRFVMPGAA 112 (309)
T ss_dssp -EEEEEEECHH-HHHHHHHHHHHTTCCEEEEECSS-CCCCCEEEEETTTCCEEEEECCCCC
T ss_pred -eEEEEEecCc-hHHHHHHHHHHcCCCceeEEcCC-CCeeEEEEEEcCCCCEEEEEcCCCC
Confidence 6999999998 99999999999999999986544 47888888 8888999998888864
No 40
>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A*
Probab=99.56 E-value=2e-14 Score=128.88 Aligned_cols=109 Identities=16% Similarity=0.106 Sum_probs=89.2
Q ss_pred CcEEEE-cCcceeeEeecChhHHHhhccCCCceeeeccccccceeeeccCCccEEecCChHHHHHHHHHHhCCCCCCCCC
Q 024255 123 WDVLGL-GQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPA 201 (270)
Q Consensus 123 ~~VlvI-G~alVDii~~vd~~~pe~~~L~~G~~~lv~~ee~~~l~e~i~~~~~~~~~GGsAaNtAvaLARLG~~~~~~p~ 201 (270)
.+|+++ +++.+|+++.++. + .+|+... +..+...+||+++|+|++|+|||.+
T Consensus 2 ~~i~~v~~n~~~D~~~~v~~-~------~~g~~~~--------------~~~~~~~~GG~~~NvA~~la~LG~~------ 54 (309)
T 3umo_A 2 VRIYTLTLAPSLDSATITPQ-I------YPEGKLR--------------CTAPVFEPGGGGINVARAIAHLGGS------ 54 (309)
T ss_dssp CCEEEECSSCEEEEEEEESC-C------CSSSEEE--------------CCCCEEEEESHHHHHHHHHHHTTCC------
T ss_pred CcEEEEecchhheEEEEcCc-c------cCCCeEE--------------eceeeecCCchHHHHHHHHHHcCCC------
Confidence 356666 5799999999987 3 2454333 3467889999999999999999998
Q ss_pred cceEEEEEeCCCchHHHHHHHHHHcCCCCccccccCCCCceEEEEEc-CCCCeEEEEecCcc
Q 024255 202 LNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTT-PDAQRAMLAYQVSF 262 (270)
Q Consensus 202 ~~V~fVG~VGdD~~Ge~I~e~L~e~GVdt~~v~~~~g~TG~~~VLv~-~dGeRTiv~~~GAn 262 (270)
+.|+|.||+| +|+++++.|+++||+++++... ..|+.+++++. ++|+|+++.++|++
T Consensus 55 --~~~i~~vG~d-~g~~i~~~l~~~gv~~~~v~~~-~~t~~~~~~~~~~~g~~~~~~~~g~~ 112 (309)
T 3umo_A 55 --ATAIFPAGGA-TGEHLVSLLADENVPVATVEAK-DWTRQNLHVHVEASGEQYRFVMPGAA 112 (309)
T ss_dssp --EEEEEEECHH-HHHHHHHHHHHTTCCEEEEECS-SCCCCCEEEEETTTCCEEEEECCCCC
T ss_pred --eEEEEEecCc-hHHHHHHHHHHcCCceEEEEec-CCCeeEEEEEECCCCcEEEEEcCCCC
Confidence 6999999999 9999999999999999988754 35666666554 48999999999875
No 41
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A
Probab=99.55 E-value=3.4e-14 Score=128.16 Aligned_cols=108 Identities=17% Similarity=0.030 Sum_probs=91.0
Q ss_pred cEEEEcCcceee-EeecChhHHHhhccCCCceeeeccccccceeeeccCCccEEecCChHHHHHHHHHHhCCCCCCCCCc
Q 024255 124 DVLGLGQAMVDF-SGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPAL 202 (270)
Q Consensus 124 ~VlvIG~alVDi-i~~vd~~~pe~~~L~~G~~~lv~~ee~~~l~e~i~~~~~~~~~GGsAaNtAvaLARLG~~~~~~p~~ 202 (270)
-+.+.+++++|+ ++.++. + .+|+... ...+...+||+++|+|++|+|||.+
T Consensus 4 i~tvt~np~iD~~~~~v~~-~------~~g~~~~--------------~~~~~~~~GG~~~NvA~~la~LG~~------- 55 (320)
T 3ie7_A 4 IYTITLNPAIDRLLFIRGE-L------EKRKTNR--------------VIKTEFDCGGKGLHVSGVLSKFGIK------- 55 (320)
T ss_dssp EEEEESSCEEEEEEEESSS-C------CTTSCCC--------------CSEEEEEEESHHHHHHHHHHHHTCC-------
T ss_pred EEEEecchHHeeeEEEcCC-c------cCCCeeE--------------eceeeecCCchHHHHHHHHHHcCCC-------
Confidence 456677999999 999886 3 2454322 2357789999999999999999998
Q ss_pred ceEEEEEeCCCchHHHHHHHHHHcCCCCccccccCCCCceEEEEEcCCCC--eEEEEecCcc
Q 024255 203 NVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQ--RAMLAYQVSF 262 (270)
Q Consensus 203 ~V~fVG~VGdD~~Ge~I~e~L~e~GVdt~~v~~~~g~TG~~~VLv~~dGe--RTiv~~~GAn 262 (270)
|.|+|.||+| +|+++++.|++.||+++++...+++|+.++++++ +|+ |+++.++|+.
T Consensus 56 -~~~i~~vG~d-~g~~i~~~l~~~gv~~~~v~~~~~~t~~~~~~~~-~g~~~~~~~~~~g~~ 114 (320)
T 3ie7_A 56 -NEALGIAGSD-NLDKLYAILKEKHINHDFLVEAGTSTRECFVVLS-DDTNGSTMIPEAGFT 114 (320)
T ss_dssp -EEEEEEEEST-THHHHHHHHHHTTCCBCCEEETTCCCEEEEEEEE-TTCSCCEEEECCCCC
T ss_pred -eEEEEEecCc-hHHHHHHHHHHcCCceEEEEecCCCCceEEEEEE-CCCceeEEEeCCCCC
Confidence 6999999998 9999999999999999998444558999999999 889 9999888863
No 42
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A*
Probab=99.52 E-value=7.2e-14 Score=126.67 Aligned_cols=108 Identities=23% Similarity=0.263 Sum_probs=90.9
Q ss_pred CcEEEEcCcceeeEeecChhHHHhhccCCCceeeeccccccceeeeccCCccEEecCChHHHHHHHHHHhCCCCCCCCCc
Q 024255 123 WDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPAL 202 (270)
Q Consensus 123 ~~VlvIG~alVDii~~vd~~~pe~~~L~~G~~~lv~~ee~~~l~e~i~~~~~~~~~GGsAaNtAvaLARLG~~~~~~p~~ 202 (270)
+.|+++|++++|+++.++. | .+|+...+ ..+...+||+++|+|++|+|||.+
T Consensus 3 m~i~v~g~~~~D~~~~v~~--~-----~~g~~~~~--------------~~~~~~~GG~~~NvA~~la~LG~~------- 54 (323)
T 2f02_A 3 LIVTVTMNPSIDISYLLDH--L-----KLDTVNRT--------------SQVTKTPGGKGLNVTRVIHDLGGD------- 54 (323)
T ss_dssp CEEEEESSCEEEEEEECSC--C-----CTTSEEEE--------------SCEEEEEESHHHHHHHHHHHHTCC-------
T ss_pred eEEEEecCceeEEEEecCC--c-----ccCCEEEe--------------ceEEEcCCcHHHHHHHHHHHcCCC-------
Confidence 5899999999999999886 2 35553333 346788999999999999999998
Q ss_pred ceEEEEEeCCCchHHHHHHHHHHcCCCCccccccCCCCceEEEEEcCCCCeEEEEecCcc
Q 024255 203 NVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQVSF 262 (270)
Q Consensus 203 ~V~fVG~VGdD~~Ge~I~e~L~e~GVdt~~v~~~~g~TG~~~VLv~~dGeRTiv~~~GAn 262 (270)
+.|+|.||+ .+|+++++.|++.||+++++.+.. .|++++++++++ +|+++..+|++
T Consensus 55 -~~~~~~vG~-~~G~~i~~~L~~~gV~~~~v~~~~-~t~~~~~~~~~~-~~~~~~~~g~~ 110 (323)
T 2f02_A 55 -VIATGVLGG-FHGAFIANELKKANIPQAFTSIKE-ETRDSIAILHEG-NQTEILEAGPT 110 (323)
T ss_dssp -EEEEEEEEH-HHHHHHHHHHHHTTCCBCCEEESS-CCEEEEEEEETT-EEEEEEECCCB
T ss_pred -eEEEEEecc-chHHHHHHHHHHCCCceeEEEcCC-CCeeEEEEEcCC-CeEEEECCCCC
Confidence 699999997 699999999999999999887644 588999998876 88888778763
No 43
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.51 E-value=4.2e-14 Score=125.80 Aligned_cols=94 Identities=21% Similarity=0.238 Sum_probs=76.7
Q ss_pred CcEEEEcCcceeeEeecChhHHHhhccCCCceeeeccccccceeeeccCCccEEecCChHHHHHHHHHHhCCCCCCCCCc
Q 024255 123 WDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPAL 202 (270)
Q Consensus 123 ~~VlvIG~alVDii~~vd~~~pe~~~L~~G~~~lv~~ee~~~l~e~i~~~~~~~~~GGsAaNtAvaLARLG~~~~~~p~~ 202 (270)
++|+++|++++|++ |+ ...+||+++|+|++|+|||.+
T Consensus 4 ~~v~viG~~~~D~~-------p~-----------------------------~~~~GG~~~N~A~~la~LG~~------- 40 (296)
T 2qhp_A 4 NIIVGMGEALWDVL-------PE-----------------------------GKKIGGAPANFAYHVSQFGFD------- 40 (296)
T ss_dssp CEEEEESCCEEEEE-------TT-----------------------------EEEEECHHHHHHHHHHHTTCE-------
T ss_pred ceEEEEchhheEec-------CC-----------------------------CCCCCCHHHHHHHHHHHcCCC-------
Confidence 37999999999997 20 145999999999999999998
Q ss_pred ceEEEEEeCCCchHHHHHHHHHHcCCCCcccccc-CCCCceEEEEEcCCCCeEEEEecCcc
Q 024255 203 NVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIK-DGTTGTVIVLTTPDAQRAMLAYQVSF 262 (270)
Q Consensus 203 ~V~fVG~VGdD~~Ge~I~e~L~e~GVdt~~v~~~-~g~TG~~~VLv~~dGeRTiv~~~GAn 262 (270)
|.|+|.||+|.+|+++++.|++.|| +++.+. +.+|++++++++++|+|++.++++++
T Consensus 41 -~~~~~~vG~D~~g~~~~~~l~~~gv--~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~~~~ 98 (296)
T 2qhp_A 41 -SRVVSAVGNDELGDEIMEVFKEKQL--KNQIERVDYPTGTVQVTLDDEGVPCYEIKEGVA 98 (296)
T ss_dssp -EEEEEEEESSHHHHHHHHHHHHTTC--CEEEEEESSCCEEEEEC------CCEEECSSCG
T ss_pred -eeEEEEeCCChHHHHHHHHHHHcCC--CEEeecCCCCceEEEEEECCCCCEEEEEecCCh
Confidence 6999999999999999999999999 666655 35899999999888999998888764
No 44
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A*
Probab=99.49 E-value=1.7e-13 Score=124.97 Aligned_cols=108 Identities=24% Similarity=0.203 Sum_probs=89.6
Q ss_pred CcEEEEcCcceeeEeecChhHHHhhccCCCceeeeccccccceeeeccCCccEEecCChHHHHHHHHHHhCCCCCCCCCc
Q 024255 123 WDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPAL 202 (270)
Q Consensus 123 ~~VlvIG~alVDii~~vd~~~pe~~~L~~G~~~lv~~ee~~~l~e~i~~~~~~~~~GGsAaNtAvaLARLG~~~~~~p~~ 202 (270)
+.++++|++++|+++.++. + ..|+...+ ..+...+||+++|+|++|+|||.+
T Consensus 21 Mi~~v~G~~~~D~~~~~~~-~------~~g~~~~~--------------~~~~~~~GG~~~NvA~~la~LG~~------- 72 (330)
T 2jg1_A 21 MILTLTLNPSVDISYPLTA-L------KLDDVNRV--------------QEVSKTAGGKGLNVTRVLAQVGEP------- 72 (330)
T ss_dssp CEEEEESSCEEEEEEEESC-C------CTTSEEEE--------------SCCEEEEECHHHHHHHHHHHHTCC-------
T ss_pred EEEEEecchhheEEEecCC-c------cCCceEEe--------------ceEEEcCCchHHHHHHHHHHhCCC-------
Confidence 4566889999999999886 3 24543332 356788999999999999999998
Q ss_pred ceEEEEEeCCCchHHHHHHHHHHcCCCCccccccCCCCceEEEEEcCCCCeEEEEecCcc
Q 024255 203 NVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQVSF 262 (270)
Q Consensus 203 ~V~fVG~VGdD~~Ge~I~e~L~e~GVdt~~v~~~~g~TG~~~VLv~~dGeRTiv~~~GAn 262 (270)
|.|+|.||+ .+|+++++.|++.||+++++.... .|++++++++++ +|+++..+|++
T Consensus 73 -~~~i~~vG~-~~G~~l~~~L~~~gV~~~~v~~~~-~t~~~~~~v~~~-~~~~~~~~g~~ 128 (330)
T 2jg1_A 73 -VLASGFIGG-ELGQFIAKKLDHADIKHAFYNIKG-ETRNCIAILHEG-QQTEILEQGPE 128 (330)
T ss_dssp -EEEEEEEEH-HHHHHHHHHHHHTTCEECCEEESS-CCEEEEEEEETT-EEEEEEECCCB
T ss_pred -eEEEEEecc-hhHHHHHHHHHHCCCceeEEEccC-CCeeEEEEEeCC-CcEEEECCCCC
Confidence 699999996 799999999999999999987554 589999999876 88888777764
No 45
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A*
Probab=99.46 E-value=1.5e-13 Score=127.30 Aligned_cols=113 Identities=20% Similarity=0.169 Sum_probs=85.0
Q ss_pred CCCCcEEEEcCcceeeEee--cChhHHHhhccCCCceeeeccccccceeeeccCCccEEecCChHHHHHHHHHHhCCCCC
Q 024255 120 PERWDVLGLGQAMVDFSGM--VDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPI 197 (270)
Q Consensus 120 ~~~~~VlvIG~alVDii~~--vd~~~pe~~~L~~G~~~lv~~ee~~~l~e~i~~~~~~~~~GGsAaNtAvaLARLG~~~~ 197 (270)
+++.+|+|+|++++|++.. ++. +.++ .+.. . +....+...+||+ +|+|++|+|||.+
T Consensus 51 ~~~~~ilvvG~~~~D~~~~g~v~r-~~p~---~p~~--~------------~~~~~~~~~~GG~-~NvA~~la~LG~~-- 109 (352)
T 4e84_A 51 LARSRVLVVGDVMLDRYWFGNVDR-ISPE---APVP--V------------VHVQRQEERLGGA-ANVARNAVTLGGQ-- 109 (352)
T ss_dssp HTTCEEEEEECEEEEEEEEEEEEE-ECSS---SSSE--E------------EEEEEEEEEEEEH-HHHHHHHHHTTCE--
T ss_pred cCCCcEEEECccceEEEEeecccc-cCCC---CCcc--e------------EEeeEEEEecChH-HHHHHHHHHcCCC--
Confidence 4567999999999999987 333 2100 0110 0 1123467889997 8999999999998
Q ss_pred CCCCcceEEEEEeCCCchHHHHHHHHHHcCCCCccccccCCCCceEEEEEcCCCCeEEEEec
Q 024255 198 GGPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQ 259 (270)
Q Consensus 198 ~~p~~~V~fVG~VGdD~~Ge~I~e~L~e~GVdt~~v~~~~g~TG~~~VLv~~dGeRTiv~~~ 259 (270)
|.|+|.||+|.+|+++++.|++.||++..+...+.+|+++++++++++++.++.+.
T Consensus 110 ------v~~ig~vG~D~~G~~i~~~L~~~GV~~~~~~~~~~~T~~~~~~~~~~~~~~~~~~~ 165 (352)
T 4e84_A 110 ------AGLLCVVGCDEPGERIVELLGSSGVTPHLERDPALPTTIKLRVLARQQQLLRVDFE 165 (352)
T ss_dssp ------EEEEEEEESSHHHHHHHHHHTTTSCEEEEEEETTSCCCEEEEEEESSCEEEEEEEC
T ss_pred ------EEEEEEeCCChhHHHHHHHHHHcCCceeeEECCCCCCceEEEEEcCCceEEEEEcC
Confidence 69999999999999999999999999954443345899999999876655555543
No 46
>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus}
Probab=99.42 E-value=9.5e-13 Score=117.54 Aligned_cols=105 Identities=16% Similarity=0.100 Sum_probs=87.4
Q ss_pred EEEEcCcceeeEeecChhHHHhhccCCCceeeeccccccceeeeccCCccEEecCChHHHHHHHHHHhCCCCCCCCCcce
Q 024255 125 VLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPALNV 204 (270)
Q Consensus 125 VlvIG~alVDii~~vd~~~pe~~~L~~G~~~lv~~ee~~~l~e~i~~~~~~~~~GGsAaNtAvaLARLG~~~~~~p~~~V 204 (270)
+.+.|++++|+++.++. + .+|+...+ ..+...+||+++|+|++|+|||.+ +
T Consensus 3 ~tvt~n~~~D~~~~~~~-~------~~g~~~~~--------------~~~~~~~GG~~~N~A~~la~LG~~--------~ 53 (306)
T 2jg5_A 3 YTVTFNPSIDYVIFTND-F------KIDGLNRA--------------TATYKFAGGKGINVSRVLKTLDVE--------S 53 (306)
T ss_dssp EEEESSCEEEEEEECSS-C------CTTSEEEC--------------SEEEEEEESHHHHHHHHHHHTTCC--------C
T ss_pred EEEecCceEEEEEEcCC-c------ccCceEEe--------------ceeEecCCchHHHHHHHHHHcCCC--------e
Confidence 56789999999999986 3 24543332 356788999999999999999998 5
Q ss_pred EEEEEeCCCchHHHHHHHHHHcCCCCccccccCCCCceEEEEEcCCCCeEEEEecCcc
Q 024255 205 AMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQVSF 262 (270)
Q Consensus 205 ~fVG~VGdD~~Ge~I~e~L~e~GVdt~~v~~~~g~TG~~~VLv~~dGeRTiv~~~GAn 262 (270)
.|+|.||+ .+|+++++.|++.||+++++.+.. .|++++++ ++|+|+++..+|++
T Consensus 54 ~~~~~vG~-~~g~~i~~~l~~~gv~~~~v~~~~-~t~~~~~~--~~g~~~~~~~~g~~ 107 (306)
T 2jg5_A 54 TALGFAGG-FPGKFIIDTLNNSAIQSNFIEVDE-DTRINVKL--KTGQETEINAPGPH 107 (306)
T ss_dssp EEEEEECH-HHHHHHHHHHHHTTCEECCEECSS-CCEEEEEE--ESSSEEEEECCCCC
T ss_pred eEEEEecC-cchHHHHHHHHHCCCceeEEEcCC-CCeEEEEE--cCCCEEEEECCCCC
Confidence 99999999 799999999999999999987643 58888876 57899888888864
No 47
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.41 E-value=8.3e-13 Score=120.76 Aligned_cols=104 Identities=20% Similarity=0.287 Sum_probs=82.6
Q ss_pred CCcEEEEcCcceeeEeecChhHHHhhccCCCceeeeccccccceeeeccCCccEEecCChHHHHHHHHHHhCCCCCCCCC
Q 024255 122 RWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPA 201 (270)
Q Consensus 122 ~~~VlvIG~alVDii~~vd~~~pe~~~L~~G~~~lv~~ee~~~l~e~i~~~~~~~~~GGsAaNtAvaLARLG~~~~~~p~ 201 (270)
.++|+++|.++.++...... .+. .+..+...+||+++|+|++|+|||.+
T Consensus 12 ~~~~~~~ge~l~~~~~~~~~-------------~~~------------~~~~~~~~~GG~~~NvA~~la~LG~~------ 60 (351)
T 2afb_A 12 HMKVVTFGEIMLRLSPPDHK-------------RIF------------QTDSFDVTYGGAEANVAAFLAQMGLD------ 60 (351)
T ss_dssp CCEEEEESCCEEEEECSTTC-------------CGG------------GCSEEEEEEECHHHHHHHHHHHTTSE------
T ss_pred cceEEEechhhheecCCCCc-------------ccc------------ccceeeEecCChHHHHHHHHHHcCCC------
Confidence 47999999999887532110 010 12346788999999999999999998
Q ss_pred cceEEEEEeCCCchHHHHHHHHHHcCCCCccccccCCCCceEEEEEcCCCCe-EEEEec
Q 024255 202 LNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQR-AMLAYQ 259 (270)
Q Consensus 202 ~~V~fVG~VGdD~~Ge~I~e~L~e~GVdt~~v~~~~g~TG~~~VLv~~dGeR-Tiv~~~ 259 (270)
|.|++.||+|.+|+++++.|++.||++.++...+.+|+++++.++. ++| +++.|.
T Consensus 61 --~~~i~~vG~D~~G~~i~~~L~~~gv~~~~v~~~~~~t~~~~v~~~~-~~r~~~v~~~ 116 (351)
T 2afb_A 61 --AYFVTKLPNNPLGDAAAGHLRKFGVKTDYIARGGNRIGIYFLEIGA-SQRPSKVVYD 116 (351)
T ss_dssp --EEEEEEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCEEEEECCB-TTBCCEEEEE
T ss_pred --eEEEEEeCCCHHHHHHHHHHHHcCCcceeEEECCCcceEEEEEecC-CCCcceEEEe
Confidence 6999999999999999999999999999987655689999988764 555 566654
No 48
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1
Probab=99.41 E-value=9.4e-13 Score=118.04 Aligned_cols=105 Identities=18% Similarity=0.240 Sum_probs=86.9
Q ss_pred EEEEcCcceeeEeecChhHHHhhccCCCceeeeccccccceeeeccCCccEEecCChHHHHHHHHHHhCCCCCCCCCcce
Q 024255 125 VLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPALNV 204 (270)
Q Consensus 125 VlvIG~alVDii~~vd~~~pe~~~L~~G~~~lv~~ee~~~l~e~i~~~~~~~~~GGsAaNtAvaLARLG~~~~~~p~~~V 204 (270)
+.+.|++++|+++.++. + .+|+...+ ..+...+||+++|+|++|+|||.+ +
T Consensus 3 ~tv~~n~~~D~~~~~~~-~------~~g~~~~~--------------~~~~~~~GG~~~N~A~~la~LG~~--------~ 53 (306)
T 2abq_A 3 YTVTLNPSIDYIVQVEN-F------QQGVVNRS--------------ERDRKQPGGKGINVSRVLKRLGHE--------T 53 (306)
T ss_dssp EEEESSCEEEEEEECTT-C------CSSSEEEC--------------SEEEEEEECHHHHHHHHHHHTTCC--------C
T ss_pred EEEecCchheEEEEcCC-c------ccCCeEEe--------------ceeEecCCchHHHHHHHHHHcCCC--------c
Confidence 46789999999999886 3 24553332 346788999999999999999998 5
Q ss_pred EEEEEeCCCchHHHHHHHHHHcCCCCccccccCCCCceEEEEEcCCCCeEEEEecCcc
Q 024255 205 AMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQVSF 262 (270)
Q Consensus 205 ~fVG~VGdD~~Ge~I~e~L~e~GVdt~~v~~~~g~TG~~~VLv~~dGeRTiv~~~GAn 262 (270)
.|+|.||+ .+|+++++.|++.||++.++.... .|++++++ ++|+|+++..+|+.
T Consensus 54 ~~~~~vG~-~~g~~i~~~L~~~gv~~~~v~~~~-~t~~~~~~--~~g~~~~~~~~g~~ 107 (306)
T 2abq_A 54 KALGFLGG-FTGAYVRNALEKEEIGLSFIEVEG-DTRINVKI--KGKQETELNGTAPL 107 (306)
T ss_dssp EEEEEEEH-HHHHHHHHHHHHTTCEECCEEESS-CCEEEEEE--ESSSCEEEBCCCCC
T ss_pred eEEEEecc-hhHHHHHHHHHHcCCceEEEEcCC-CCceEEEE--eCCceEEEECCCCC
Confidence 99999998 899999999999999999987643 58888877 47899888777753
No 49
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum}
Probab=99.34 E-value=1.5e-12 Score=117.80 Aligned_cols=101 Identities=19% Similarity=0.154 Sum_probs=79.2
Q ss_pred CcEEEEcCcceeeEeecChhHHHhhccCCCceeeeccccccceeeeccCCccEEecCChHHHHHHHHHHhCC-CCCCCCC
Q 024255 123 WDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGG-KPIGGPA 201 (270)
Q Consensus 123 ~~VlvIG~alVDii~~vd~~~pe~~~L~~G~~~lv~~ee~~~l~e~i~~~~~~~~~GGsAaNtAvaLARLG~-~~~~~p~ 201 (270)
++|+|+|++++|++.... + .....+||+++|+|++|+|||. +
T Consensus 3 ~~ilviG~~~iD~~~~~~-----------~--------------------~~~~~~GG~~~NvA~~la~LG~~~------ 45 (313)
T 3kd6_A 3 LSLLVIGSLAFDDIETPF-----------G--------------------RSDNTLGGSSTYIALSASYFTDEP------ 45 (313)
T ss_dssp CCEEEESCCEEEEEECSS-----------C--------------------EEEEEEECHHHHHHHHHTTTCSSC------
T ss_pred ccEEEEeEEEEeeecCCC-----------C--------------------cccccCCCHHHHHHHHHHHhCCCc------
Confidence 479999999999995321 1 2457799999999999999999 8
Q ss_pred cceEEEEEeCCCchHHHHHHHHHHcCCCCccccccC-CCCceEE--EEEcCCCCeEEEEecCccc
Q 024255 202 LNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKD-GTTGTVI--VLTTPDAQRAMLAYQVSFQ 263 (270)
Q Consensus 202 ~~V~fVG~VGdD~~Ge~I~e~L~e~GVdt~~v~~~~-g~TG~~~--VLv~~dGeRTiv~~~GAn~ 263 (270)
|.|+|.||+| +|+++++.|+++||+++++.+.+ .+|.... ..++.++++++....+++.
T Consensus 46 --~~~ig~vG~D-~g~~~~~~L~~~gVd~~~v~~~~~~~T~~~~g~~~~~~~~~~~~~~~~~~~~ 107 (313)
T 3kd6_A 46 --IRMVGVVGSD-FGKEHFDLLHAKNIDTRGIQVIEDGKTFRWAGRYHYDMNTRDTLDTQLNVFA 107 (313)
T ss_dssp --EEEEEEEETT-SCHHHHHHHHHTTEEEEEEEEETTCCCEEEEEEECTTSSCEEEEEEECGGGT
T ss_pred --eEEEEecCCC-cHHHHHHHHHHcCCCccceEEcCCCCeeeeeeeeeccccccceeecccchHh
Confidence 6999999999 99999999999999999998766 4663211 1233456677777766543
No 50
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.14 E-value=2.9e-11 Score=108.54 Aligned_cols=80 Identities=15% Similarity=0.012 Sum_probs=63.7
Q ss_pred ccEEecCChHHHHHHHHHHhCCCCCCCCCcceEEEEEeCCCchHHHHHHHHHHcCCCCccccccCCCCceEEEEEcCCCC
Q 024255 173 SYKAAAGGSLSNSLVALARLGGKPIGGPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQ 252 (270)
Q Consensus 173 ~~~~~~GGsAaNtAvaLARLG~~~~~~p~~~V~fVG~VGdD~~Ge~I~e~L~e~GVdt~~v~~~~g~TG~~~VLv~~dGe 252 (270)
.+...+||+++|+|++|+|||.+ |.|+|.||+|. +.+++.|++.||++.++.. ..+|++++++ +++|+
T Consensus 30 ~~~~~~GG~~~NvA~~la~LG~~--------~~~i~~vG~D~--~~~~~~L~~~gVd~~~v~~-~~~t~~~~i~-~~~g~ 97 (298)
T 1vk4_A 30 KREIAYGGGVVMGAITSSLLGVK--------TKVITKCTRED--VSKFSFLRDNGVEVVFLKS-PRTTSIENRY-GSDPD 97 (298)
T ss_dssp EEEEEEECHHHHHHHHHHHTTCE--------EEEEEEECTTT--GGGGTTTGGGTCEEEEEEC-SSCEEEEEEC------
T ss_pred eEEEecCCHHHHHHHHHHHcCCc--------eEEEEEEcCCH--HHHHHHHHHcCCceEEEec-CCCcEEEEEE-cCCCC
Confidence 35678999999999999999998 69999999998 7899999999999998764 4467777665 55789
Q ss_pred eEEEEecCcccc
Q 024255 253 RAMLAYQVSFQR 264 (270)
Q Consensus 253 RTiv~~~GAn~~ 264 (270)
|+++.+.+++..
T Consensus 98 ~~~~~~~~~~~~ 109 (298)
T 1vk4_A 98 TRESFLISAADP 109 (298)
T ss_dssp CCEEEEEECCCC
T ss_pred eeEEEecccccc
Confidence 999988887643
No 51
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A*
Probab=73.90 E-value=0.29 Score=43.50 Aligned_cols=37 Identities=19% Similarity=0.186 Sum_probs=29.4
Q ss_pred eEEEEEeCCCchHHHHHHHHHHcCCCCcccccc--CCCCceEE
Q 024255 204 VAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIK--DGTTGTVI 244 (270)
Q Consensus 204 V~fVG~VGdD~~Ge~I~e~L~e~GVdt~~v~~~--~g~TG~~~ 244 (270)
+.++|.||+|. |+++ |++.||++.++... ...|++++
T Consensus 13 ~~~~g~vG~D~-g~~i---L~~~GV~~~~v~~~~~~~~t~~~~ 51 (312)
T 2yxt_A 13 HVIRGYVGNRA-ATFP---LQVLGFEIDAVNSVQFSNHTGYAH 51 (312)
T ss_dssp EESSSCSTHHH-HHHH---HHHTTCEEEEEEEEEESSCTTSSC
T ss_pred ccCCCccchHh-hHHH---HHHcCCeEEEEEEEEecCCCCcCC
Confidence 57889999999 9999 99999999988654 34566443
No 52
>3ost_A Serine/threonine-protein kinase KCC4; kinase associated-1(Ka1) domain, transferase, lipid binding membrane association; 1.69A {Saccharomyces cerevisiae} PDB: 3osm_A
Probab=50.42 E-value=4.7 Score=33.04 Aligned_cols=21 Identities=43% Similarity=0.841 Sum_probs=12.2
Q ss_pred ccCCccchhhhhhhhhcccCc
Q 024255 24 HHHPHRTKLQALVFRKFSLGK 44 (270)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~ 44 (270)
|||.|...-....|||||-+.
T Consensus 3 ~~~~~~~~~~~~f~rkfs~~~ 23 (128)
T 3ost_A 3 HHHHHKKPPNSVLLKKFSKGK 23 (128)
T ss_dssp ------CCCHHHHGGGSCSSE
T ss_pred ccccCCCCCchhhhhhhcCCC
Confidence 666677777788899999655
No 53
>1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3
Probab=50.26 E-value=12 Score=36.38 Aligned_cols=70 Identities=24% Similarity=0.214 Sum_probs=44.9
Q ss_pred cEEEEcCcceeeEeecCh----hHHHhhccC------------------------------CCceeeeccccccceeeec
Q 024255 124 DVLGLGQAMVDFSGMVDD----DFLERLGLE------------------------------KGTRKLVNHEERGRVLRAM 169 (270)
Q Consensus 124 ~VlvIG~alVDii~~vd~----~~pe~~~L~------------------------------~G~~~lv~~ee~~~l~e~i 169 (270)
.|++--++++|.+.+... .++++++.. .+.+..+..++.+..+...
T Consensus 32 ~i~~Gyn~nvD~iv~~~~~~i~~Ll~~~~~~~~~~~~~~~~~~I~s~~dl~~~~~~~~~~G~aaE~~v~~~~~f~~l~~~ 111 (467)
T 1gc5_A 32 GVLLAYNTNIDAIKYLDADDLEKRVTEKGKEKVFEIIENPPEKISSIEELLGGILRSIKLGKAMEWFVESEEVRRYLREW 111 (467)
T ss_dssp CEEEESCCEEEEEEECCHHHHHHHHHHHCHHHHHHHHHSCCSSBCSHHHHHHHHHHHHHSCCCEEEEBCCHHHHHHHHHH
T ss_pred cEEEEecccEEEEEeCchHHHHHHHHHcCCcccccccccCccccCCHHHHHHHHHHHHhCCCceEEeccCHHHHHHHHHh
Confidence 677777999999999875 234444332 1333344333333333321
Q ss_pred cCCccE-EecCChHHHHHHHHHHhCCCC
Q 024255 170 DGCSYK-AAAGGSLSNSLVALARLGGKP 196 (270)
Q Consensus 170 ~~~~~~-~~~GGsAaNtAvaLARLG~~~ 196 (270)
.+. ...||.|.-.|..||++|+++
T Consensus 112 ---~~~~~~mGGnAgimAn~la~lg~~~ 136 (467)
T 1gc5_A 112 ---GWDELRIGGQAGIMANLLGGVYRIP 136 (467)
T ss_dssp ---CCSEEEEESHHHHHHHHHHHTSCCC
T ss_pred ---cCcccccCccHHHHHHHHHhcCCCE
Confidence 122 289999999999999999983
No 54
>3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A
Probab=41.85 E-value=33 Score=33.43 Aligned_cols=87 Identities=14% Similarity=0.108 Sum_probs=53.2
Q ss_pred CCCCCCCcEEEEcCcceeeEeecChhHH----Hhhcc------------------------------CCCceeeeccccc
Q 024255 117 SVLPERWDVLGLGQAMVDFSGMVDDDFL----ERLGL------------------------------EKGTRKLVNHEER 162 (270)
Q Consensus 117 ~~~~~~~~VlvIG~alVDii~~vd~~~p----e~~~L------------------------------~~G~~~lv~~ee~ 162 (270)
--+|+...|++--+++||.+.+.+.+-+ ++++. -.+.+..+..++.
T Consensus 22 ~~~~~~~~i~~ayN~NVDai~~~~~~~i~~li~~~~~~~v~~~~~~~p~~I~s~~dl~~~~~~~~~~G~aaE~~v~~~~~ 101 (474)
T 3drw_A 22 HMIPEHLSIYTAYNANIAAIVKLNQETIQNLINAFDPDEVKRRIEEYPREINEPIDFVARLVHTLKLGKPAAVPLVNEKM 101 (474)
T ss_dssp -CCCTTCEEEEESCCEEEEEEECCHHHHHHHHHTSCHHHHHHHHHHCCSSBSSHHHHHHHHHHHHHHTCCEEEEECCTTH
T ss_pred ccccccCceEEEecccEEEEEEcCHHHHHHHHHhcChHHhhhhhhcCCccCCCHHHHHHHHHHHHhCCCceEEecccHhH
Confidence 3456677999999999999999876322 11111 1233333333333
Q ss_pred cceeeeccCCcc-EEecCChHHHHHHHHHHhCCCCCCCCCcceEEEEEeCC
Q 024255 163 GRVLRAMDGCSY-KAAAGGSLSNSLVALARLGGKPIGGPALNVAMTGSVGS 212 (270)
Q Consensus 163 ~~l~e~i~~~~~-~~~~GGsAaNtAvaLARLG~~~~~~p~~~V~fVG~VGd 212 (270)
..+.+. ...+ ....||.|.-.|..||++|++. |.+.+.+..
T Consensus 102 ~~~~~~--~~~~~~~~~GGnA~imAn~La~lg~~~-------Vi~~~p~~s 143 (474)
T 3drw_A 102 NEWFDK--TFRYEEERLGGQAGIIANTLAGLKIRK-------VIAYTPFLP 143 (474)
T ss_dssp HHHHHH--HCCCSEEEEESHHHHHHHHHHHTTCSE-------EEECCSCCC
T ss_pred HHHHHH--hcccceEecCChHHHHHHHHHHcCCCc-------EEEecCcCC
Confidence 333321 1122 6789999999999999999952 455555544
No 55
>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}
Probab=36.46 E-value=65 Score=22.94 Aligned_cols=42 Identities=24% Similarity=0.276 Sum_probs=28.5
Q ss_pred HHHHHHHHHHcCCCCccccccCCCCceEEEEEcCCCCeEEEE
Q 024255 216 GGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLA 257 (270)
Q Consensus 216 Ge~I~e~L~e~GVdt~~v~~~~g~TG~~~VLv~~dGeRTiv~ 257 (270)
=+.+.++|++.|+.+...........+.+.+.+|+|.+--++
T Consensus 85 v~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~ 126 (127)
T 3e5d_A 85 VDELTEKLRQDGFAIAGEPRMTGDGYYESVVLDPEGNRIEIT 126 (127)
T ss_dssp HHHHHHHHHHTTCCEEEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred HHHHHHHHHHcCCeEecCcccCCCCcEEEEEECCCCCEEEEe
Confidence 567889999999987654332222235677889999875544
No 56
>1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3
Probab=35.41 E-value=17 Score=35.31 Aligned_cols=70 Identities=23% Similarity=0.261 Sum_probs=43.8
Q ss_pred cEEEEcCcceeeEeecCh----hHHHhhccC------------------------------CCceeeeccccccceeeec
Q 024255 124 DVLGLGQAMVDFSGMVDD----DFLERLGLE------------------------------KGTRKLVNHEERGRVLRAM 169 (270)
Q Consensus 124 ~VlvIG~alVDii~~vd~----~~pe~~~L~------------------------------~G~~~lv~~ee~~~l~e~i 169 (270)
+|++--++++|.+.+..+ .++++++.. .+.+..+..++.++.+...
T Consensus 27 ~i~~gyn~nvD~iv~~~~~~i~~Ll~~~~~~~~~~~~~~~~~~I~s~~dl~~~~~~~~~~G~aaE~~v~~~~~f~~l~~~ 106 (457)
T 1l2l_A 27 GVLLAYNTNIDAIKYLKREDLEKRIEKVGKEEVLRYSEELPKEIETIPQLLGSILWSIKRGKAAELLVVSREVREYMRKW 106 (457)
T ss_dssp CEEEEECCEEEEECBCCHHHHHHHHHHHCHHHHHHHHHSCCSSBCSHHHHHHHHHHHHHHTCCEEEEBCCHHHHHHHHHH
T ss_pred cEEEEecccEEEEEECchHHHHHHHHHhCCcccccccccCCcccCCHHHHHHHHHHHHhCCCceEEeccCHHHHHHHHHh
Confidence 677767999999998865 234433331 1233333333333332221
Q ss_pred cCCccE-EecCChHHHHHHHHHHhCCCC
Q 024255 170 DGCSYK-AAAGGSLSNSLVALARLGGKP 196 (270)
Q Consensus 170 ~~~~~~-~~~GGsAaNtAvaLARLG~~~ 196 (270)
.+. ...||.|.-.|..||++|+++
T Consensus 107 ---~~~~~~mGGnA~imAn~la~lg~~~ 131 (457)
T 1l2l_A 107 ---GWDELRMGGQVGIMANLLGGVYGIP 131 (457)
T ss_dssp ---CCSEEEEESHHHHHHHHHTTTSCCC
T ss_pred ---cCCccccCchHHHHHHHHHHcCCCE
Confidence 122 389999999999999999984
No 57
>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}
Probab=33.76 E-value=95 Score=21.92 Aligned_cols=40 Identities=15% Similarity=0.030 Sum_probs=27.0
Q ss_pred HHHHHHHHHHcCCCCccccccCCCCceEEEEEcCCCCeEE
Q 024255 216 GGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAM 255 (270)
Q Consensus 216 Ge~I~e~L~e~GVdt~~v~~~~g~TG~~~VLv~~dGeRTi 255 (270)
=+.+.+.|++.|+.+.............+.+.+|+|.+--
T Consensus 92 ~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~ie 131 (134)
T 3l7t_A 92 VEASRQELIALGIRVEEVRYDDYTGKKMAFFFDPDGLPLE 131 (134)
T ss_dssp HHHHHHHHHHHTCCCCCCEECTTSCCEEEEEECTTCCEEE
T ss_pred HHHHHHHHHhCCCcccceeccCCCceEEEEEECCCCCEEE
Confidence 4677889999999876443322233467777799987643
No 58
>1vrm_A Hypothetical protein TM1553; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: UNL; 1.58A {Thermotoga maritima} SCOP: d.96.2.1
Probab=32.79 E-value=7.3 Score=35.90 Aligned_cols=23 Identities=9% Similarity=-0.127 Sum_probs=15.2
Q ss_pred EEeCCCchHHHHHHHHHHcCCCC
Q 024255 208 GSVGSDPLGGFYRAKLRRANVAF 230 (270)
Q Consensus 208 G~VGdD~~Ge~I~e~L~e~GVdt 230 (270)
|.|++....+.+.+.|++.||..
T Consensus 163 ggIAKGyavD~~~~~L~~~Gi~~ 185 (325)
T 1vrm_A 163 GGIAKGYALDRARQIALSFDENA 185 (325)
T ss_dssp TTTHHHHHHHHHHHHHHHHCTTC
T ss_pred cHhHHHHHHHHHHHHHHHcCCCc
Confidence 44555556677777777777765
No 59
>1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3
Probab=32.39 E-value=25 Score=34.04 Aligned_cols=20 Identities=25% Similarity=0.273 Sum_probs=18.9
Q ss_pred ecCChHHHHHHHHHHhCCCC
Q 024255 177 AAGGSLSNSLVALARLGGKP 196 (270)
Q Consensus 177 ~~GGsAaNtAvaLARLG~~~ 196 (270)
..||.|...|..++++|.++
T Consensus 109 ~~GGnA~imAn~la~lg~~~ 128 (455)
T 1ua4_A 109 RMGGQAGIMANLLGGVYGVP 128 (455)
T ss_dssp EEESHHHHHHHHHTTTTCCC
T ss_pred ccCCcHHHHHHHHHHcCCCE
Confidence 89999999999999999984
No 60
>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A
Probab=32.31 E-value=96 Score=22.40 Aligned_cols=47 Identities=15% Similarity=0.048 Sum_probs=31.8
Q ss_pred hHHHHHHHHHHcCCCCccccccCCCCceEEEEEcCCCCeEEEEecCc
Q 024255 215 LGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQVS 261 (270)
Q Consensus 215 ~Ge~I~e~L~e~GVdt~~v~~~~g~TG~~~VLv~~dGeRTiv~~~GA 261 (270)
.=+.+.+.|++.|+............+..+.+.||+|.+--+..+..
T Consensus 78 d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~ 124 (133)
T 2p7o_A 78 EVDEYTERIKALGVEMKPERPRVQGEGRSIYFYDFDNHLFELHAGTL 124 (133)
T ss_dssp GHHHHHHHHHHHTCCEECCCCCCTTCCCEEEEECSSSCEEEEECSSC
T ss_pred HHHHHHHHHHHCCCcccCCCccCCCCeeEEEEECCCCCEEEEEcCCh
Confidence 35677888999999865443222234567778899998877666544
No 61
>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}
Probab=30.51 E-value=1.3e+02 Score=21.00 Aligned_cols=39 Identities=18% Similarity=0.077 Sum_probs=25.5
Q ss_pred HHHHHHHHHHcCCCCccccccCCCCc-eEEEEEcCCCCeEE
Q 024255 216 GGFYRAKLRRANVAFCSEPIKDGTTG-TVIVLTTPDAQRAM 255 (270)
Q Consensus 216 Ge~I~e~L~e~GVdt~~v~~~~g~TG-~~~VLv~~dGeRTi 255 (270)
=+.+.+.|++.|+....... ....| ..+.+.+|+|.+--
T Consensus 84 ~~~~~~~l~~~G~~~~~~~~-~~~~g~~~~~~~DPdG~~ie 123 (126)
T 2p25_A 84 IEEVIAFLNEQGIETEPLRV-DDFTGKKMTFFFDPDGLPLE 123 (126)
T ss_dssp HHHHHHHHHHTTCCCCCCEE-CTTTCCEEEEEECTTCCEEE
T ss_pred HHHHHHHHHHcCCccccccc-cCCCCcEEEEEECCCCCEEE
Confidence 44577899999998764332 22233 56667799987643
No 62
>1doa_B RHO GDI 1, protein (GDP-dissociation inhibitor 1); GTP-binding protein, CDC42, cell cycle; HET: GDP GER; 2.60A {Bos taurus} SCOP: b.1.18.8 PDB: 1hh4_D* 1cc0_E*
Probab=30.29 E-value=30 Score=30.62 Aligned_cols=40 Identities=33% Similarity=0.384 Sum_probs=11.6
Q ss_pred ccCCCCCCCCCCCccc-ccccCccccCCCCCCcccccccCC
Q 024255 77 SNGGGGDLGRDNYEED-DEAGDESEADDDGDEYDEEISGSA 116 (270)
Q Consensus 77 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 116 (270)
|.||||-||--.+.|- -++.+...++++++++++.+..+.
T Consensus 6 ~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~~~~~~~yk~~~ 46 (219)
T 1doa_B 6 SGGGGGILGLMAEQEPTAEQLAQIAAENEEDEHSVNYKPPA 46 (219)
T ss_dssp --------------CCCCSTTTTTCSSSSSCCCSCCCCCCC
T ss_pred cCCCcceEEEeecccccccccccccccccccccccCcccCC
Confidence 5688888887665553 233444444444455444444433
No 63
>1uvq_C Orexin; immunology, MHC class II, diabetes, narcolepsy, autoimmune disease, structural proteomics in europe, spine, structural genomics; HET: NAG FUC BMA; 1.8A {Homo sapiens}
Probab=30.05 E-value=15 Score=22.87 Aligned_cols=18 Identities=50% Similarity=0.850 Sum_probs=14.5
Q ss_pred CCcceeEeeccCCCCCCC
Q 024255 68 SSSLSVCWASNGGGGDLG 85 (270)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~ 85 (270)
-+|.-|.||.-+|||.|-
T Consensus 8 ~pSTKVsWAaVtgggslv 25 (33)
T 1uvq_C 8 LPSTKVSWAAVGGGGSLV 25 (33)
T ss_pred CCccccceEEecCCceee
Confidence 345678999999999874
No 64
>3uh9_A Metallothiol transferase FOSB 2; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol; HET: MSE; 1.60A {Bacillus anthracis}
Probab=28.06 E-value=91 Score=23.13 Aligned_cols=45 Identities=13% Similarity=0.151 Sum_probs=31.1
Q ss_pred hHHHHHHHHHHcCCCCccccccCCCCceEEEEEcCCCCeEEEEec
Q 024255 215 LGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQ 259 (270)
Q Consensus 215 ~Ge~I~e~L~e~GVdt~~v~~~~g~TG~~~VLv~~dGeRTiv~~~ 259 (270)
.=+.+.+.|++.|+.+..........+..+.+.||+|.+--+..+
T Consensus 75 d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~ 119 (145)
T 3uh9_A 75 ALDHLKEVLIQNDVNILPGRERDERDQRSLYFTDPDGHKFEFHTG 119 (145)
T ss_dssp HHHHHHHHHHHTTCCBCCCCCCCGGGCCEEEEECTTCCEEEEESS
T ss_pred HHHHHHHHHHHCCCeEecCCccCCCCeeEEEEEcCCCCEEEEEcC
Confidence 346788999999998754322223345777788999988666554
No 65
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=26.22 E-value=41 Score=27.34 Aligned_cols=22 Identities=23% Similarity=0.063 Sum_probs=13.7
Q ss_pred HHHHHHHhCCCCCCCCCcceEEEEEeCCCc
Q 024255 185 SLVALARLGGKPIGGPALNVAMTGSVGSDP 214 (270)
Q Consensus 185 tAvaLARLG~~~~~~p~~~V~fVG~VGdD~ 214 (270)
.+..|..+|.+ |...+.|+||.
T Consensus 45 L~~~L~~~G~~--------v~~~~iV~Dd~ 66 (178)
T 3iwt_A 45 IKQLLIENGHK--------IIGYSLVPDDK 66 (178)
T ss_dssp HHHHHHHTTCE--------EEEEEEECSCH
T ss_pred HHHHHHHCCCE--------EEEEEEeCCCH
Confidence 34455566766 56777777763
No 66
>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}
Probab=25.47 E-value=99 Score=23.20 Aligned_cols=42 Identities=7% Similarity=0.076 Sum_probs=28.7
Q ss_pred HHHHHHHHHHcCCCCccccccCCCCceEEEEEcCCCCeEEEE
Q 024255 216 GGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLA 257 (270)
Q Consensus 216 Ge~I~e~L~e~GVdt~~v~~~~g~TG~~~VLv~~dGeRTiv~ 257 (270)
=+.+.+.|++.|+.+..........+..+.+.||+|.+--++
T Consensus 98 ld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~ 139 (141)
T 3ghj_A 98 IEPLKKALESKGVSVHGPVNQEWMQAVSLYFADPNGHALEFT 139 (141)
T ss_dssp HHHHHHHHHHTTCCCEEEEEEGGGTEEEEEEECTTCCEEEEE
T ss_pred HHHHHHHHHHCCCeEeCCcccCCCCceEEEEECCCCCEEEEE
Confidence 466889999999987632221223457788889999875544
No 67
>2ayu_A Nucleosome assembly protein; histone chaperone; 3.00A {Saccharomyces cerevisiae} SCOP: d.305.1.1 PDB: 2z2r_A
Probab=23.25 E-value=17 Score=34.87 Aligned_cols=8 Identities=25% Similarity=0.679 Sum_probs=4.9
Q ss_pred eEEEccCC
Q 024255 59 FLWVSPSS 66 (270)
Q Consensus 59 ~~~~~~~~ 66 (270)
|-|.+|..
T Consensus 313 FnfFspp~ 320 (417)
T 2ayu_A 313 FNFFDPPK 320 (417)
T ss_dssp GGGGSCSC
T ss_pred eeecCCCC
Confidence 56777653
No 68
>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2
Probab=22.82 E-value=1.3e+02 Score=20.95 Aligned_cols=45 Identities=7% Similarity=0.023 Sum_probs=28.8
Q ss_pred EeCCCchHHHHHHHHHHcCCCCccccccCCCCceEEEEEcCCCCeEEE
Q 024255 209 SVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAML 256 (270)
Q Consensus 209 ~VGdD~~Ge~I~e~L~e~GVdt~~v~~~~g~TG~~~VLv~~dGeRTiv 256 (270)
.|.+...=+.+.+.|++.|+.+... ... . +..+.+.+|+|.+--+
T Consensus 67 ~v~~~~d~~~~~~~l~~~G~~~~~p-~~~-~-~~~~~~~DPdG~~iel 111 (113)
T 1xqa_A 67 PQESEEQVDKINQRLKEDGFLVEPP-KHA-H-AYTFYVEAPGGFTIEV 111 (113)
T ss_dssp ECSSHHHHHHHHHHHHHTTCCCCCC-EEC---CEEEEEEETTTEEEEE
T ss_pred EcCCHHHHHHHHHHHHHCCCEEecC-cCC-C-cEEEEEECCCCcEEEE
Confidence 3444233456778899999986542 222 2 6788888999876444
No 69
>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2
Probab=21.68 E-value=2.1e+02 Score=19.97 Aligned_cols=41 Identities=15% Similarity=0.156 Sum_probs=27.9
Q ss_pred HHHHHHHHHHcCCCCccccccCCCCc-eEEEEEcCCCCeEEEE
Q 024255 216 GGFYRAKLRRANVAFCSEPIKDGTTG-TVIVLTTPDAQRAMLA 257 (270)
Q Consensus 216 Ge~I~e~L~e~GVdt~~v~~~~g~TG-~~~VLv~~dGeRTiv~ 257 (270)
=+.+.+.|++.|+.+...... .+.| ..+.+.||+|.+--+.
T Consensus 75 ~~~~~~~l~~~G~~~~~~~~~-~~~g~~~~~~~DPdG~~iel~ 116 (119)
T 2pjs_A 75 FDEVHARILKAGLPIEYGPVT-EAWGVQRLFLRDPFGKLINIL 116 (119)
T ss_dssp HHHHHHHHHHTTCCCSEEEEE-CTTSCEEEEEECTTSCEEEEE
T ss_pred HHHHHHHHHHCCCccccCCcc-CCCccEEEEEECCCCCEEEEE
Confidence 567788999999987543322 2234 6777889999875544
No 70
>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}
Probab=20.62 E-value=1.4e+02 Score=21.93 Aligned_cols=44 Identities=11% Similarity=-0.039 Sum_probs=29.3
Q ss_pred hHHHHHHHHHHcCCCCccccccCCCCceEEEEEcCCCCeEEEEe
Q 024255 215 LGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAY 258 (270)
Q Consensus 215 ~Ge~I~e~L~e~GVdt~~v~~~~g~TG~~~VLv~~dGeRTiv~~ 258 (270)
.=+.+.+.|++.|+.+..........+..+.+.||+|.+--+..
T Consensus 88 dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~ 131 (141)
T 2rbb_A 88 AVDKLVPVAIAAGATLIKAPYETYYHWYQAVLLDPERNVFRINN 131 (141)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEECTTSEEEEEEECTTSCEEEEEE
T ss_pred HHHHHHHHHHHcCCeEecCccccCCccEEEEEECCCCCEEEEEE
Confidence 45678899999998754332222223577788899998865554
No 71
>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2
Probab=20.40 E-value=1.6e+02 Score=21.58 Aligned_cols=44 Identities=11% Similarity=0.055 Sum_probs=28.6
Q ss_pred HHHHHHHHHHcCCCCccccccCCCCceEEEEEcCCCCeEEEEec
Q 024255 216 GGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQ 259 (270)
Q Consensus 216 Ge~I~e~L~e~GVdt~~v~~~~g~TG~~~VLv~~dGeRTiv~~~ 259 (270)
=+.+.+.|++.|+.+..........+..+.+.||+|.+--+...
T Consensus 79 ~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~ 122 (139)
T 1r9c_A 79 FDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNHMFELHTG 122 (139)
T ss_dssp HHHHHHHHHHHTCCBCCCCC-----CCEEEEECTTSCEEEEECC
T ss_pred HHHHHHHHHHCCCcccCCcccCCCCeEEEEEECCCCCEEEEEeC
Confidence 46778899999998664422211245677788999988666554
No 72
>3m2o_A Glyoxalase/bleomycin resistance protein; unknown function, structural genomics, putative glyoxylase/B resistance protein; HET: PG4; 1.35A {Rhodopseudomonas palustris} PDB: 3vcx_A*
Probab=20.38 E-value=1.8e+02 Score=22.40 Aligned_cols=43 Identities=12% Similarity=0.066 Sum_probs=28.6
Q ss_pred HHHHHHHHHHcCCCCccccccCCCCc-eEEEEEcCCCCeEEEEec
Q 024255 216 GGFYRAKLRRANVAFCSEPIKDGTTG-TVIVLTTPDAQRAMLAYQ 259 (270)
Q Consensus 216 Ge~I~e~L~e~GVdt~~v~~~~g~TG-~~~VLv~~dGeRTiv~~~ 259 (270)
=+.+.+.|++.|+.+..-... ...| ..+.+.||+|.+--+..+
T Consensus 101 vd~~~~~l~~~G~~~~~~~~~-~~~g~~~~~~~DPdG~~iel~~~ 144 (164)
T 3m2o_A 101 PDREYARLQQAGLPILLTLRD-EDFGQRHFITADPNGVLIDIIKP 144 (164)
T ss_dssp HHHHHHHHHHTTCCCSEEEEE-C---CEEEEEECTTCCEEEEEC-
T ss_pred HHHHHHHHHHCCCceecCccc-cCCCcEEEEEECCCCCEEEEEEE
Confidence 577888999999987543222 2334 677788999988766654
No 73
>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}
Probab=20.34 E-value=2e+02 Score=21.98 Aligned_cols=50 Identities=2% Similarity=-0.030 Sum_probs=34.5
Q ss_pred EeCCCchHHHHHHHHHHcCCCCccccccCCCCceEEEEEcCCCCeEEEEec
Q 024255 209 SVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQ 259 (270)
Q Consensus 209 ~VGdD~~Ge~I~e~L~e~GVdt~~v~~~~g~TG~~~VLv~~dGeRTiv~~~ 259 (270)
.|.+...=+.+.+.|++.|+.+..... ....+..+.+.||+|.+--+..+
T Consensus 83 ~V~~~~dld~~~~~l~~~G~~~~~~~~-~~~g~~~~~~~DPdG~~iel~~~ 132 (160)
T 3r4q_A 83 YADDKAEVDEWKTRFEALEIPVEHYHR-WPNGSYSVYIRDPAGNSVEVGEG 132 (160)
T ss_dssp EESSHHHHHHHHHHHHTTTCCCCEEEE-CTTSCEEEEEECTTCCEEEEEEG
T ss_pred EeCCHHHHHHHHHHHHHCCCEEecccc-ccCCcEEEEEECCCCCEEEEEeC
Confidence 454445567888999999998763221 12346788888999988766654
Done!