Query 024256
Match_columns 270
No_of_seqs 328 out of 2354
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 05:06:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024256.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024256hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ddj_A CBS domain-containing p 99.9 6.8E-25 2.3E-29 189.7 9.3 219 41-267 18-286 (296)
2 3kh5_A Protein MJ1225; AMPK, A 99.9 2.2E-24 7.7E-29 184.4 12.4 215 44-264 4-279 (280)
3 2v8q_E 5'-AMP-activated protei 99.9 8.5E-24 2.9E-28 185.6 14.9 226 38-268 30-325 (330)
4 3k6e_A CBS domain protein; str 99.9 1.5E-23 5.3E-28 165.0 13.5 139 31-171 3-145 (156)
5 3lhh_A CBS domain protein; str 99.9 1.2E-22 4.1E-27 162.3 13.4 135 30-170 30-166 (172)
6 3hf7_A Uncharacterized CBS-dom 99.9 1.3E-22 4.3E-27 154.7 11.5 123 43-167 2-126 (130)
7 2qrd_G Protein C1556.08C; AMPK 99.9 3.3E-22 1.1E-26 175.7 15.8 232 31-267 10-316 (334)
8 3t4n_C Nuclear protein SNF4; C 99.9 1.2E-22 3.9E-27 177.8 11.8 232 30-266 17-320 (323)
9 3lv9_A Putative transporter; C 99.9 3.9E-22 1.3E-26 155.1 13.5 134 29-168 10-145 (148)
10 4esy_A CBS domain containing m 99.9 1.3E-22 4.6E-27 161.6 10.3 128 35-166 10-160 (170)
11 2yzq_A Putative uncharacterize 99.9 7.9E-23 2.7E-27 175.2 7.6 210 44-266 2-279 (282)
12 3i8n_A Uncharacterized protein 99.9 6.5E-22 2.2E-26 150.6 11.6 124 40-167 3-128 (130)
13 3oi8_A Uncharacterized protein 99.9 6.5E-22 2.2E-26 155.5 11.1 128 30-163 26-155 (156)
14 3lfr_A Putative metal ION tran 99.9 2.4E-22 8.3E-27 154.3 7.6 123 43-168 3-127 (136)
15 2ef7_A Hypothetical protein ST 99.9 9.1E-21 3.1E-25 144.4 15.7 125 41-169 2-126 (133)
16 3ctu_A CBS domain protein; str 99.9 2E-21 6.7E-26 152.4 12.2 137 32-171 4-145 (156)
17 3jtf_A Magnesium and cobalt ef 99.9 1.2E-21 4.2E-26 148.9 10.7 121 42-168 4-126 (129)
18 3ocm_A Putative membrane prote 99.9 2.8E-21 9.4E-26 154.7 13.2 135 29-170 23-159 (173)
19 3fv6_A YQZB protein; CBS domai 99.9 8.6E-21 3E-25 149.4 15.6 135 34-172 8-148 (159)
20 3nqr_A Magnesium and cobalt ef 99.9 1.1E-21 3.6E-26 148.8 9.1 120 43-166 3-124 (127)
21 1pbj_A Hypothetical protein; s 99.9 8.8E-21 3E-25 142.8 14.1 119 44-166 2-120 (125)
22 3oco_A Hemolysin-like protein 99.9 2.5E-21 8.5E-26 151.5 11.3 133 31-169 9-144 (153)
23 3gby_A Uncharacterized protein 99.9 2.8E-21 9.7E-26 146.5 11.3 121 42-166 4-124 (128)
24 3kpb_A Uncharacterized protein 99.9 9.1E-21 3.1E-25 142.2 12.9 116 44-166 2-118 (122)
25 3lqn_A CBS domain protein; csg 99.9 3.7E-21 1.3E-25 149.7 11.1 130 38-170 10-145 (150)
26 2rc3_A CBS domain; in SITU pro 99.9 7.2E-21 2.5E-25 145.5 12.4 123 44-167 7-130 (135)
27 2p9m_A Hypothetical protein MJ 99.8 2.1E-20 7.2E-25 143.2 13.8 125 39-167 4-135 (138)
28 2yzi_A Hypothetical protein PH 99.8 2.1E-20 7.3E-25 143.3 13.8 124 41-168 5-129 (138)
29 3k2v_A Putative D-arabinose 5- 99.8 1.4E-20 4.7E-25 146.5 12.8 122 41-164 26-148 (149)
30 2rih_A Conserved protein with 99.8 3.3E-20 1.1E-24 142.9 14.7 119 42-165 4-125 (141)
31 4fry_A Putative signal-transdu 99.8 1.1E-20 3.7E-25 148.3 11.9 127 43-170 7-137 (157)
32 4af0_A Inosine-5'-monophosphat 99.8 1.6E-22 5.5E-27 183.1 -0.3 151 1-165 100-255 (556)
33 4gqw_A CBS domain-containing p 99.8 1.6E-20 5.5E-25 145.9 11.1 126 42-168 4-143 (152)
34 1y5h_A Hypothetical protein RV 99.8 1.3E-20 4.3E-25 143.6 10.1 121 42-165 7-128 (133)
35 2o16_A Acetoin utilization pro 99.8 5.1E-20 1.7E-24 145.2 13.8 123 42-168 4-135 (160)
36 3fhm_A Uncharacterized protein 99.8 1.8E-20 6E-25 148.5 11.2 126 39-166 20-148 (165)
37 2emq_A Hypothetical conserved 99.8 5.5E-20 1.9E-24 144.0 12.9 129 39-170 7-141 (157)
38 1o50_A CBS domain-containing p 99.8 1.5E-19 5.2E-24 141.9 15.3 122 43-168 16-153 (157)
39 1yav_A Hypothetical protein BS 99.8 7.2E-20 2.5E-24 143.9 12.4 130 38-170 9-144 (159)
40 3sl7_A CBS domain-containing p 99.8 2.3E-20 7.8E-25 149.3 9.7 127 43-170 4-158 (180)
41 3kxr_A Magnesium transporter, 99.8 4.7E-19 1.6E-23 145.5 17.3 128 31-168 43-174 (205)
42 3usb_A Inosine-5'-monophosphat 99.8 5.3E-20 1.8E-24 170.1 12.9 151 1-167 75-233 (511)
43 2nyc_A Nuclear protein SNF4; b 99.8 1.6E-19 5.4E-24 139.1 13.1 124 41-167 6-140 (144)
44 1pvm_A Conserved hypothetical 99.8 1.6E-19 5.6E-24 145.5 13.1 122 41-165 7-130 (184)
45 4fxs_A Inosine-5'-monophosphat 99.8 6.4E-21 2.2E-25 175.7 4.0 152 1-165 51-206 (496)
46 2j9l_A Chloride channel protei 99.8 2.6E-19 8.7E-24 143.9 12.9 131 38-170 6-167 (185)
47 2pfi_A Chloride channel protei 99.8 1.2E-18 4E-23 137.3 14.6 126 41-170 11-149 (164)
48 2uv4_A 5'-AMP-activated protei 99.8 1.3E-18 4.4E-23 135.8 14.0 119 43-166 23-149 (152)
49 3l2b_A Probable manganase-depe 99.8 6.1E-19 2.1E-23 148.5 12.9 122 41-165 5-241 (245)
50 3kh5_A Protein MJ1225; AMPK, A 99.8 2.2E-18 7.4E-23 147.1 15.1 166 42-212 83-279 (280)
51 4avf_A Inosine-5'-monophosphat 99.8 1.1E-20 3.6E-25 174.0 -0.8 152 1-165 50-204 (490)
52 3t4n_C Nuclear protein SNF4; C 99.8 1.6E-18 5.6E-23 151.3 13.0 141 25-168 164-320 (323)
53 3ddj_A CBS domain-containing p 99.8 7.8E-19 2.7E-23 151.6 10.7 169 42-215 92-286 (296)
54 1vr9_A CBS domain protein/ACT 99.8 5.3E-18 1.8E-22 140.0 14.7 119 41-168 11-130 (213)
55 2oux_A Magnesium transporter; 99.8 1E-17 3.6E-22 144.3 14.3 119 41-168 135-259 (286)
56 2yvy_A MGTE, Mg2+ transporter 99.7 1.5E-17 5E-22 142.8 14.3 117 41-166 133-255 (278)
57 1me8_A Inosine-5'-monophosphat 99.7 5.5E-20 1.9E-24 170.0 -1.6 155 1-167 59-220 (503)
58 2yzq_A Putative uncharacterize 99.7 9.6E-18 3.3E-22 143.4 10.6 170 42-214 59-279 (282)
59 2qrd_G Protein C1556.08C; AMPK 99.7 4.4E-17 1.5E-21 142.9 14.2 140 25-167 159-314 (334)
60 2d4z_A Chloride channel protei 99.7 3.2E-17 1.1E-21 138.3 11.8 123 41-167 11-245 (250)
61 1zfj_A Inosine monophosphate d 99.7 1.3E-16 4.5E-21 147.4 15.4 151 1-167 52-210 (491)
62 1vrd_A Inosine-5'-monophosphat 99.7 7.4E-19 2.5E-23 162.5 -0.7 151 1-167 57-214 (494)
63 3pc3_A CG1753, isoform A; CBS, 99.7 5.6E-17 1.9E-21 151.0 11.5 122 42-168 383-511 (527)
64 2zy9_A Mg2+ transporter MGTE; 99.7 2.7E-16 9.1E-21 144.4 14.8 118 41-167 153-276 (473)
65 3org_A CMCLC; transporter, tra 99.7 2.1E-17 7.2E-22 156.8 6.2 123 41-165 451-622 (632)
66 2v8q_E 5'-AMP-activated protei 99.7 4.2E-16 1.4E-20 136.5 12.1 141 25-167 164-322 (330)
67 2cu0_A Inosine-5'-monophosphat 99.6 5E-17 1.7E-21 149.8 2.2 147 1-165 55-205 (486)
68 1jcn_A Inosine monophosphate d 99.6 1.8E-17 6.1E-22 153.9 -5.5 151 1-165 70-230 (514)
69 3lv9_A Putative transporter; C 99.6 7.9E-15 2.7E-19 113.5 10.0 140 89-267 4-146 (148)
70 3k6e_A CBS domain protein; str 99.6 1.2E-14 4.2E-19 113.9 9.9 58 110-167 15-74 (156)
71 4esy_A CBS domain containing m 99.6 2.9E-15 1E-19 118.9 5.8 57 109-165 17-73 (170)
72 3ghd_A A cystathionine beta-sy 99.5 2.4E-14 8.2E-19 96.7 7.9 69 55-123 2-70 (70)
73 3lhh_A CBS domain protein; str 99.5 3.9E-14 1.3E-18 112.7 10.0 142 87-267 21-165 (172)
74 3i8n_A Uncharacterized protein 99.5 1E-13 3.5E-18 104.9 8.9 122 109-266 5-129 (130)
75 3ocm_A Putative membrane prote 99.5 1.8E-13 6.1E-18 109.1 9.8 141 87-267 15-158 (173)
76 3nqr_A Magnesium and cobalt ef 99.5 4.5E-14 1.5E-18 106.4 5.7 122 109-266 2-126 (127)
77 3kpb_A Uncharacterized protein 99.5 1.6E-13 5.6E-18 102.2 8.7 118 111-266 2-120 (122)
78 3gby_A Uncharacterized protein 99.5 3.8E-13 1.3E-17 101.4 10.5 56 109-165 4-59 (128)
79 3jtf_A Magnesium and cobalt ef 99.5 1E-13 3.6E-18 104.7 7.2 121 109-267 4-127 (129)
80 3kxr_A Magnesium transporter, 99.4 1.8E-13 6.1E-18 112.1 8.5 121 108-268 52-176 (205)
81 3hf7_A Uncharacterized CBS-dom 99.4 1E-13 3.5E-18 105.0 6.4 124 110-267 2-128 (130)
82 2o16_A Acetoin utilization pro 99.4 8.2E-14 2.8E-18 109.4 5.2 60 109-168 4-63 (160)
83 3oco_A Hemolysin-like protein 99.4 5.1E-13 1.8E-17 103.9 9.5 122 109-267 19-144 (153)
84 3lfr_A Putative metal ION tran 99.4 1.1E-13 3.7E-18 105.6 4.4 57 109-165 2-61 (136)
85 2ef7_A Hypothetical protein ST 99.4 1.5E-12 5E-17 98.6 10.5 56 109-165 3-58 (133)
86 3ctu_A CBS domain protein; str 99.4 5.3E-13 1.8E-17 104.0 7.9 59 109-167 14-74 (156)
87 3lqn_A CBS domain protein; csg 99.4 8.5E-13 2.9E-17 102.1 8.6 57 109-165 14-72 (150)
88 1pbj_A Hypothetical protein; s 99.4 4.9E-13 1.7E-17 99.9 6.8 121 111-266 2-122 (125)
89 2yzi_A Hypothetical protein PH 99.4 1.4E-12 4.9E-17 99.2 9.5 58 108-165 5-62 (138)
90 2p9m_A Hypothetical protein MJ 99.4 2.7E-13 9.3E-18 103.2 5.3 129 109-266 7-136 (138)
91 2rih_A Conserved protein with 99.4 1.8E-12 6.1E-17 99.2 9.2 56 110-165 5-62 (141)
92 1o50_A CBS domain-containing p 99.4 1.2E-12 4.3E-17 102.1 8.2 62 104-166 10-72 (157)
93 3oi8_A Uncharacterized protein 99.4 3E-14 1E-18 111.4 -1.2 58 108-165 36-96 (156)
94 2nyc_A Nuclear protein SNF4; b 99.4 9.1E-13 3.1E-17 100.9 7.2 131 109-266 7-141 (144)
95 1yav_A Hypothetical protein BS 99.4 4.3E-13 1.5E-17 104.9 5.2 57 109-165 13-71 (159)
96 4gqw_A CBS domain-containing p 99.4 7.2E-13 2.5E-17 102.3 6.2 57 109-165 4-62 (152)
97 2pfi_A Chloride channel protei 99.3 6E-13 2E-17 104.3 5.2 58 109-166 12-71 (164)
98 1y5h_A Hypothetical protein RV 99.3 2.1E-13 7.1E-18 103.3 2.4 124 110-267 8-132 (133)
99 3fv6_A YQZB protein; CBS domai 99.3 4.2E-12 1.4E-16 99.3 9.8 56 109-165 16-71 (159)
100 2emq_A Hypothetical conserved 99.3 4.2E-12 1.4E-16 98.8 9.6 57 109-165 10-68 (157)
101 3l2b_A Probable manganase-depe 99.3 1E-12 3.5E-17 110.2 6.3 59 109-167 6-64 (245)
102 3sl7_A CBS domain-containing p 99.3 1.4E-12 4.8E-17 103.7 6.3 56 110-165 4-61 (180)
103 3fhm_A Uncharacterized protein 99.3 7.3E-12 2.5E-16 98.6 10.3 60 108-167 22-84 (165)
104 3k2v_A Putative D-arabinose 5- 99.3 5.9E-13 2E-17 103.1 3.3 57 110-166 28-86 (149)
105 2oux_A Magnesium transporter; 99.3 4.2E-12 1.4E-16 109.1 8.0 124 106-268 133-261 (286)
106 1pvm_A Conserved hypothetical 99.3 1E-11 3.5E-16 99.6 8.9 57 109-165 8-64 (184)
107 2yvy_A MGTE, Mg2+ transporter 99.3 1E-11 3.5E-16 106.3 8.8 120 109-267 134-258 (278)
108 2uv4_A 5'-AMP-activated protei 99.3 2.3E-12 7.9E-17 100.0 4.2 56 109-166 22-77 (152)
109 2rc3_A CBS domain; in SITU pro 99.3 1.8E-11 6.2E-16 92.8 9.0 54 111-165 7-63 (135)
110 2d4z_A Chloride channel protei 99.3 3.7E-11 1.3E-15 101.1 11.5 61 109-169 12-74 (250)
111 2j9l_A Chloride channel protei 99.2 3.3E-11 1.1E-15 96.2 9.8 59 109-167 10-76 (185)
112 1vr9_A CBS domain protein/ACT 99.2 5.6E-12 1.9E-16 103.6 4.2 119 109-267 12-131 (213)
113 3fio_A A cystathionine beta-sy 99.2 4.3E-11 1.5E-15 80.2 7.9 68 55-123 2-70 (70)
114 4fry_A Putative signal-transdu 99.2 6.4E-12 2.2E-16 97.9 4.2 123 110-267 7-136 (157)
115 3pc3_A CG1753, isoform A; CBS, 99.2 1.1E-11 3.6E-16 115.4 5.8 124 109-267 383-512 (527)
116 2zy9_A Mg2+ transporter MGTE; 99.1 5.4E-11 1.8E-15 109.1 7.7 121 108-267 153-278 (473)
117 4fxs_A Inosine-5'-monophosphat 99.0 1.1E-10 3.9E-15 107.3 2.3 121 110-266 89-209 (496)
118 3org_A CMCLC; transporter, tra 99.0 5.6E-11 1.9E-15 112.7 -0.3 57 109-165 452-511 (632)
119 3usb_A Inosine-5'-monophosphat 98.9 4.6E-10 1.6E-14 103.7 3.2 119 111-266 114-234 (511)
120 1vrd_A Inosine-5'-monophosphat 98.9 2E-10 6.9E-15 106.0 -0.0 121 111-267 96-216 (494)
121 4avf_A Inosine-5'-monophosphat 98.8 2.6E-10 9E-15 104.9 -0.3 120 110-266 88-207 (490)
122 1me8_A Inosine-5'-monophosphat 98.8 4.4E-10 1.5E-14 103.8 0.1 119 113-266 99-221 (503)
123 1zfj_A Inosine monophosphate d 98.8 1.2E-08 4E-13 94.1 9.6 54 111-164 91-146 (491)
124 3ghd_A A cystathionine beta-sy 98.8 1.3E-08 4.6E-13 68.2 7.1 45 120-165 2-46 (70)
125 3fio_A A cystathionine beta-sy 98.7 7.1E-08 2.4E-12 64.1 7.1 46 119-165 1-46 (70)
126 4af0_A Inosine-5'-monophosphat 98.6 5.1E-09 1.8E-13 95.2 -0.1 114 114-266 142-258 (556)
127 1jcn_A Inosine monophosphate d 98.6 1.2E-09 4.2E-14 101.2 -4.7 67 92-164 96-165 (514)
128 2cu0_A Inosine-5'-monophosphat 98.4 2.2E-08 7.4E-13 92.1 -0.1 114 112-266 95-208 (486)
129 1tif_A IF3-N, translation init 58.2 5 0.00017 26.6 1.9 25 238-266 16-40 (78)
130 1tif_A IF3-N, translation init 47.9 36 0.0012 22.4 4.7 25 141-165 13-37 (78)
131 3ffs_A Inosine-5-monophosphate 35.2 7.9 0.00027 34.1 -0.0 25 1-30 50-74 (400)
132 1p0z_A Sensor kinase CITA; tra 34.5 29 0.00099 24.7 3.0 26 63-88 36-63 (131)
133 3by8_A Sensor protein DCUS; hi 33.6 29 0.001 25.2 3.0 89 62-164 41-131 (142)
134 1svj_A Potassium-transporting 31.6 42 0.0014 25.1 3.6 33 64-96 121-153 (156)
135 3fan_A Non-structural protein; 28.2 32 0.0011 27.3 2.4 26 139-164 124-149 (213)
136 2w5e_A Putative serine proteas 25.7 40 0.0014 25.4 2.5 23 137-159 122-144 (163)
137 3r2g_A Inosine 5'-monophosphat 25.2 81 0.0028 27.2 4.7 70 1-83 50-119 (361)
138 3tjo_A Serine protease HTRA1; 24.2 42 0.0014 26.7 2.5 21 140-160 187-207 (231)
139 2qkp_A Uncharacterized protein 24.1 40 0.0014 24.7 2.2 16 143-158 110-125 (151)
140 3lgi_A Protease DEGS; stress-s 22.4 45 0.0015 26.5 2.4 21 139-159 173-193 (237)
141 3sti_A Protease DEGQ; serine p 20.8 54 0.0018 26.5 2.5 21 139-159 184-204 (245)
142 4fo4_A Inosine 5'-monophosphat 20.7 75 0.0026 27.4 3.6 25 1-30 54-78 (366)
143 3k6y_A Serine protease, possib 20.6 55 0.0019 25.9 2.5 21 139-159 180-200 (237)
144 1svj_A Potassium-transporting 20.1 76 0.0026 23.7 3.1 34 129-163 121-154 (156)
145 1vd2_A Protein kinase C, IOTA 20.1 83 0.0029 21.2 2.9 28 234-265 45-72 (89)
No 1
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.91 E-value=6.8e-25 Score=189.72 Aligned_cols=219 Identities=16% Similarity=0.169 Sum_probs=169.7
Q ss_pred CCCCccccccCCCceeEECCCCCHHHHHHHHHHCCCcEEEEEeCCEEEEEeeHHHHHHHHHhcCCC----------CCcc
Q 024256 41 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLP----------ADST 110 (270)
Q Consensus 41 ~~~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~~~~~~Givt~~dl~~~~~~~~~~----------~~~~ 110 (270)
..++|+++|+ ++++++++++|+.+|++.|.+++++++||++ |+++|++|..|++ +.+..+.. ....
T Consensus 18 ~~~~V~dim~--~~~~~v~~~~~v~~a~~~m~~~~~~~~~V~d-~~l~GivT~~Di~-~~~~~~~~~~~~~~~~~~~~~~ 93 (296)
T 3ddj_A 18 QGMNIETLMI--KNPPILSKEDRLGSAFKKINEGGIGRIIVAN-EKIEGLLTTRDLL-STVESYCKDSCSQGDLYHISTT 93 (296)
T ss_dssp CCSSGGGTCE--ESCCEECTTSBHHHHHHHTTGGGCCEEEEES-SSEEEEEEHHHHH-GGGTTCC---CCHHHHHHHHTS
T ss_pred cccCHHHhcc--CCCcEECCCccHHHHHHHHHHCCCceEEEEC-CeEEEEEeHHHHH-HHhcccccccccchhhHHHhcc
Confidence 5789999999 6899999999999999999999999999999 9999999999998 55532211 1146
Q ss_pred chhhccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHHH--------HHhC-------CCCC
Q 024256 111 LVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV--------ATVG-------NTAG 175 (270)
Q Consensus 111 ~v~~im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~~--------~~~~-------~~~~ 175 (270)
+++++|+++++++++++++.+|++.|.+++++++||+|++|+++|++|.+|+++.+. ..+. ....
T Consensus 94 ~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~lvGivt~~dl~~~~~~~~~~~~v~~~m~~~~~~v~~~~ 173 (296)
T 3ddj_A 94 PIIDYMTPNPVTVYNTSDEFTAINIMVTRNFGSLPVVDINDKPVGIVTEREFLLLYKDLDEIFPVKVFMSTKVQTIYKEV 173 (296)
T ss_dssp BGGGTSEESCCCEETTSCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHGGGGGGSCCCCBHHHHSBCSCCCEETTS
T ss_pred cHHHhccCCCEEEcCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHhhhcccccccHHHhhcCCCeEECCCC
Confidence 899999999999999999999999999999999999998899999999999987421 1111 1234
Q ss_pred ChHHHHHHHHHHHHHHhhccCCCCC--CCccccccccccccC----------CCCccccccCCCCCCCCCCce-------
Q 024256 176 SNNEAASTMMQKFWDSAMALSPNDD--EEDNRSEGSLKFASE----------GADTARYLSYPSPSPGVPSAF------- 236 (270)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~t~~di~~~~~~~----------~~~~~~~~~~p~~~~~~~~~~------- 236 (270)
++.++...|.......++++.+.+. +.+|..|+.+.+... .......|..+..+.....+.
T Consensus 174 ~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m 253 (296)
T 3ddj_A 174 RLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNAIKQLAKAVDKLDPDYFYGKVVKDVMVTNLVTIDELASVNRAAAEM 253 (296)
T ss_dssp BHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHHHHTCTHHHHTCBHHHHSBCCCCBCCTTSBHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHHHHhhcChhhhcCcCHHHHhCCCCeEECCCCcHHHHHHHH
Confidence 4566777777776777777764443 339999998877521 111244555555542233222
Q ss_pred ------eEEeecCCCCeeEeecCCCChHHHHHhhhhh
Q 024256 237 ------AFKVQDNKGLMHRFTCGMLPFPNFIEVTNYE 267 (270)
Q Consensus 237 ------~~~VvD~~g~l~~~~vGivs~~Dil~~i~~~ 267 (270)
.++|+|++|++ +|+||++||++.+..+
T Consensus 254 ~~~~~~~l~Vvd~~g~~----~Giit~~Dil~~l~~~ 286 (296)
T 3ddj_A 254 IVKRIGSLLILNKDNTI----RGIITERDLLIALHHI 286 (296)
T ss_dssp HHHTCSEEEEECTTSCE----EEEEEHHHHHHHHHHH
T ss_pred HHcCCCEEEEECCCCeE----EEEEcHHHHHHHHHHH
Confidence 46699999999 9999999999998654
No 2
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.91 E-value=2.2e-24 Score=184.44 Aligned_cols=215 Identities=17% Similarity=0.177 Sum_probs=162.9
Q ss_pred CccccccCCCceeEECCCCCHHHHHHHHHHCCCcEEEEEe--CCEEEEEeeHHHHHHHHHhcCCC--------------C
Q 024256 44 SLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV--ENKPRGILTSKDILMRVISQNLP--------------A 107 (270)
Q Consensus 44 ~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~--~~~~~Givt~~dl~~~~~~~~~~--------------~ 107 (270)
++++.|.. ++++++++++|+.+|++.|.+++++++||++ +|+++|++|.+|++ +.+..+.. .
T Consensus 4 ~v~~~i~~-~~~~~v~~~~sl~~a~~~m~~~~~~~lpV~d~~~~~~~Givt~~di~-~~~~~~~~~~~~~~~~~~~~~~~ 81 (280)
T 3kh5_A 4 RVMKIAQN-KKIVTVYPTTTIRKALMTMNENKYRRLPVVNAGNNKVVGIITSMDIV-DFMGGGSKYNLIREKHERNFLAA 81 (280)
T ss_dssp BGGGTSCC-SCCCCBCTTSBHHHHHHHHHHHCCCEEEEECTTTCBEEEEEEHHHHH-HHTTTSGGGHHHHTTSTTCHHHH
T ss_pred hHHHHhcC-CCcEEECCCCcHHHHHHHHHhCCCcEeeEEECCCCeEEEEEEHHHHH-HHhcccchhhhhhhccccchhHH
Confidence 44444432 5899999999999999999999999999999 59999999999998 55422110 0
Q ss_pred CccchhhccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHHHHHhC----------------
Q 024256 108 DSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVG---------------- 171 (270)
Q Consensus 108 ~~~~v~~im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~~~~---------------- 171 (270)
...+++++|+++++++++++++.+|++.|.+++++++||+|++|+++|++|.+|+++.......
T Consensus 82 ~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~~~~v 161 (280)
T 3kh5_A 82 INEPVREIMEENVITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLITERDVIRALLDKIDENEVIDDYITRDVIVA 161 (280)
T ss_dssp TTSBGGGTSBCSCCCEETTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHGGGSCTTCBSGGGCBCSCCCB
T ss_pred hhhhHHHhcCCCCEEECCCCCHHHHHHHHHhCCCCEEEEEcCCCEEEEEEEHHHHHHHHhhcCCCCCCHHHHhCCCCeEE
Confidence 1358999999999999999999999999999999999999989999999999999987533211
Q ss_pred CCCCChHHHHHHHHHHHHHHhhccCCCCC-CCccccccccccccCC---------------CCccccccCCCCCCCCCCc
Q 024256 172 NTAGSNNEAASTMMQKFWDSAMALSPNDD-EEDNRSEGSLKFASEG---------------ADTARYLSYPSPSPGVPSA 235 (270)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~t~~di~~~~~~~~---------------~~~~~~~~~p~~~~~~~~~ 235 (270)
....++.++...|.+.....++++.++.- +.+|.+|+.+.+..+. ....+.++.+..+.....+
T Consensus 162 ~~~~~l~~~~~~~~~~~~~~~~Vv~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~ 241 (280)
T 3kh5_A 162 TPGERLKDVARTMVRNGFRRLPVVSEGRLVGIITSTDFIKLLGSDWAFNHMQTGNVREITNVRMEEIMKRDVITAKEGDK 241 (280)
T ss_dssp CTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHHTSHHHHHHHHSCCTHHHHHCBHHHHSBSSCCCBCTTCB
T ss_pred CCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHHHHHhhhhhhhhhcccchhhhhCCcHHHHhcCCCEEECCCCC
Confidence 12234556777777776777777732222 3399999998875421 1124555556555323332
Q ss_pred e-------------eEEeecCCCCeeEeecCCCChHHHHHhh
Q 024256 236 F-------------AFKVQDNKGLMHRFTCGMLPFPNFIEVT 264 (270)
Q Consensus 236 ~-------------~~~VvD~~g~l~~~~vGivs~~Dil~~i 264 (270)
. .++|+|++|++ +|+||++||++.+
T Consensus 242 l~~a~~~m~~~~~~~l~Vvd~~g~~----~Givt~~dil~~l 279 (280)
T 3kh5_A 242 LKKIAEIMVTNDIGALPVVDENLRI----KGIITEKDVLKYF 279 (280)
T ss_dssp HHHHHHHHHHHTCCEEEEECTTCBE----EEEEEHHHHGGGG
T ss_pred HHHHHHHHHHCCCCEEEEECCCCeE----EEEEeHHHHHHhh
Confidence 2 46699999999 9999999999886
No 3
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.91 E-value=8.5e-24 Score=185.61 Aligned_cols=226 Identities=14% Similarity=0.122 Sum_probs=167.2
Q ss_pred HhhCCCCccccccCCCceeEECCCCCHHHHHHHHHHCCCcEEEEEe-C-CEEEEEeeHHHHHHHHHhcCC--------CC
Q 024256 38 ERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQNL--------PA 107 (270)
Q Consensus 38 ~~~~~~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~-~-~~~~Givt~~dl~~~~~~~~~--------~~ 107 (270)
+++...+++++|+|+++++++++++|+.+|++.|.+++++++||++ + ++++|+++.+|++ ..+.... ..
T Consensus 30 ~~l~~~~v~dim~p~~~v~~v~~~~~v~~a~~~~~~~~~~~~pV~d~~~~~~vGivt~~Dll-~~l~~~~~~~~~~~~~l 108 (330)
T 2v8q_E 30 TFMKSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFI-NILHRYYKSALVQIYEL 108 (330)
T ss_dssp HHHHHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSEEEEEETTTTEEEEEEEHHHHH-HHHHHHHHHHTTTCCCG
T ss_pred HHHHcCcHhhhccCCCcEEEEeCCCcHHHHHHHHHHcCCcEEEEEeCCCCeEEEEEEHHHHH-HHHHHHHhccccchhHH
Confidence 3345568999997768999999999999999999999999999999 5 7999999999998 4432110 00
Q ss_pred Ccc-------chhhccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeC-CCcEEEEEeHHHHHHHHHHHhC--------
Q 024256 108 DST-------LVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDR-DGDVVDVVDVIHITHAAVATVG-------- 171 (270)
Q Consensus 108 ~~~-------~v~~im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~-~g~~~Givt~~dll~~~~~~~~-------- 171 (270)
... +++++|.++++++++++++.+|++.|.+++.+++||+|+ +|+++|+||.+|+++++.....
T Consensus 109 ~~~~~~~~~~~~~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~ 188 (330)
T 2v8q_E 109 EEHKIETWREVYLQDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGNTLYILTHKRILKFLKLFITEFPKPEFM 188 (330)
T ss_dssp GGCBHHHHHHHHSSSSCCCCCCBCTTSBHHHHHHHHHHHTCSCEEEECTTTCCEEEEECHHHHHHHHHHHSCSSSCCGGG
T ss_pred hhccHHHHHHHHhhcccCCceEeCCCCCHHHHHHHHHHCCCCeEEEEeCCCCcEEEEEcHHHHHHHHHHHhhccCchhhh
Confidence 011 235678999999999999999999999999999999998 8999999999999987643211
Q ss_pred ------------C------CCCChHHHHHHHHHHHHHHhhccCCCCC--CCccccccccccccCCC-----Cccccc---
Q 024256 172 ------------N------TAGSNNEAASTMMQKFWDSAMALSPNDD--EEDNRSEGSLKFASEGA-----DTARYL--- 223 (270)
Q Consensus 172 ------------~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~t~~di~~~~~~~~~-----~~~~~~--- 223 (270)
. ...++.++...|.......++++.+.+. +.+|.+|+.+.+..... .....+
T Consensus 189 ~~~v~~~~v~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~l~Giit~~dl~~~~~~~~~~~~~~~v~~~~~~~ 268 (330)
T 2v8q_E 189 SKSLEELQIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYNNLDVSVTKALQHR 268 (330)
T ss_dssp GSBHHHHTCSBCSSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEGGGTGGGGGSSCCCCCSSBHHHHGGGC
T ss_pred cCCHHHhcccCcCCceEECCCCCHHHHHHHHHHcCCCeEEEECCCCcEEEEEEHHHHHHHHhccccccccCcHHHHHhcc
Confidence 1 1233456666666666666777664333 33899999988765421 113333
Q ss_pred ---cCCCCCCCCCCce-------------eEEeecCCCCeeEeecCCCChHHHHHhhhhhc
Q 024256 224 ---SYPSPSPGVPSAF-------------AFKVQDNKGLMHRFTCGMLPFPNFIEVTNYEY 268 (270)
Q Consensus 224 ---~~p~~~~~~~~~~-------------~~~VvD~~g~l~~~~vGivs~~Dil~~i~~~~ 268 (270)
+.+..+....... .++|+|++|++ +|+||++||++.+..++
T Consensus 269 ~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~l----~Giit~~Dil~~~~~~~ 325 (330)
T 2v8q_E 269 SHYFEGVLKCYLHETLEAIINRLVEAEVHRLVVVDEHDVV----KGIVSLSDILQALVLTG 325 (330)
T ss_dssp CSCCCSCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSBE----EEEEEHHHHHHHHHSSC
T ss_pred ccccCCCeEECCCCcHHHHHHHHHHCCCcEEEEEcCCCcE----EEEEeHHHHHHHHHhhc
Confidence 2344432222222 45699999999 99999999999987653
No 4
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.90 E-value=1.5e-23 Score=165.04 Aligned_cols=139 Identities=19% Similarity=0.241 Sum_probs=118.0
Q ss_pred HHHHHHHHhhCCCCccccccCCCceeEECCCCCHHHHHHHHHHCCCcEEEEEe-CCEEEEEeeHHHHHHHHHhcCCCC--
Q 024256 31 TFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPA-- 107 (270)
Q Consensus 31 ~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~-~~~~~Givt~~dl~~~~~~~~~~~-- 107 (270)
..+....+.+...+++++|+|..+++++++++|+.+|+++|.+++++++||++ +|+++|++|.+|+++.........
T Consensus 3 ami~~~~e~~l~~~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~~~lvGiit~~Di~~~~~~~~~~~~~ 82 (156)
T 3k6e_A 3 AMIAKEFETFLLGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQEI 82 (156)
T ss_dssp HHHHHHHHHHHHTTGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHHH
T ss_pred chHHHHHHHHhhccHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEecchhhhhhhccccccc
Confidence 45556665555778999999988999999999999999999999999999999 799999999999984444333221
Q ss_pred -CccchhhccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHHHHHhC
Q 024256 108 -DSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVG 171 (270)
Q Consensus 108 -~~~~v~~im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~~~~ 171 (270)
...+++++|++++.++++++++.+|++.|.+++ .+||+|++|+++|+||.+||++++...+.
T Consensus 83 ~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~--~lpVVd~~g~l~GiiT~~Dil~~~~~~~~ 145 (156)
T 3k6e_A 83 MADTDIVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVNALLH 145 (156)
T ss_dssp HTTSBGGGTCBCSCCCBCTTCCHHHHHHHTTTSS--EEEEECTTSBEEEEEEHHHHHHHHHHHSC
T ss_pred ccccCHHHhhcCCceecccccHHHHHHHHHHHcC--CeEEEecCCEEEEEEEHHHHHHHHHHHhc
Confidence 246899999999999999999999999998765 59999999999999999999998665543
No 5
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.89 E-value=1.2e-22 Score=162.33 Aligned_cols=135 Identities=13% Similarity=0.148 Sum_probs=111.3
Q ss_pred hHHHHHHHHhhCCCCccccccCCCceeEECCCCCHHHHHHHHHHCCCcEEEEEe-C-CEEEEEeeHHHHHHHHHhcCCCC
Q 024256 30 NTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQNLPA 107 (270)
Q Consensus 30 ~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~-~-~~~~Givt~~dl~~~~~~~~~~~ 107 (270)
..++..+.. +...+++++|+|.++++++++++|+.+|+++|.+++++++||++ + ++++|+||.+|++ +....+.
T Consensus 30 ~~~i~~~~~-l~~~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~-~~~~~~~-- 105 (172)
T 3lhh_A 30 HAMVKNVFR-LDERTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQLL-SESIAGE-- 105 (172)
T ss_dssp --------------CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHHHH-HHHHTTC--
T ss_pred HHHHHHHhc-cCCCCHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHHHH-HHHhhcC--
Confidence 355555533 34678999999766889999999999999999999999999999 5 8999999999998 6655442
Q ss_pred CccchhhccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHHHHHh
Q 024256 108 DSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 170 (270)
Q Consensus 108 ~~~~v~~im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~~~ 170 (270)
..+++++| ++++++++++++.+|++.|.+++.+.+||+|++|+++|+||..||+++++..+
T Consensus 106 -~~~v~~im-~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dil~~l~~~~ 166 (172)
T 3lhh_A 106 -RLELVDLV-KNCNFVPNSLSGMELLEHFRTTGSQMVFVVDEYGDLKGLVTLQDMMDALTGEF 166 (172)
T ss_dssp -CCCGGGGC-BCCEEEETTCCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHTTC
T ss_pred -cccHHHHh-cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEeCCCCEEEEeeHHHHHHHHhCCC
Confidence 46899999 89999999999999999999999999999998899999999999999866544
No 6
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.88 E-value=1.3e-22 Score=154.74 Aligned_cols=123 Identities=17% Similarity=0.189 Sum_probs=110.1
Q ss_pred CCccccccCCCceeEECCCCCHHHHHHHHHHCCCcEEEEEe--CCEEEEEeeHHHHHHHHHhcCCCCCccchhhccCCCC
Q 024256 43 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV--ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNP 120 (270)
Q Consensus 43 ~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~--~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~im~~~~ 120 (270)
.+++++|+++++++++++++|+.+|++.|.+++++++||++ +|+++|++|.+|++ +.+..+......+++++| +++
T Consensus 2 ~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~-~~~~~~~~~~~~~v~~~m-~~~ 79 (130)
T 3hf7_A 2 VSVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAY-RLMTEKKEFTKEIMLRAA-DEI 79 (130)
T ss_dssp CBHHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHH-HHHTSSSCCCHHHHHHHS-BCC
T ss_pred cCHHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHH-HHHhccCccchhhHHHhc-cCC
Confidence 46899998656899999999999999999999999999996 48999999999998 776655444457899999 678
Q ss_pred eeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHHH
Q 024256 121 ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 167 (270)
Q Consensus 121 ~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~~ 167 (270)
+++++++++.+|++.|.+++.+.+||+|++|+++|+||..|++++++
T Consensus 80 ~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~ 126 (130)
T 3hf7_A 80 YFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDILEEIV 126 (130)
T ss_dssp CEEETTCBHHHHHHHHHHHCCCEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred eEeCCCCcHHHHHHHHHhcCCeEEEEEcCCCCEEEEeeHHHHHHHHh
Confidence 89999999999999999999999999998999999999999999754
No 7
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.88 E-value=3.3e-22 Score=175.65 Aligned_cols=232 Identities=14% Similarity=0.139 Sum_probs=169.9
Q ss_pred HHHHHHHHhhCCCCccccccCCCceeEECCCCCHHHHHHHHHHCCCcEEEEEe-C-CEEEEEeeHHHHHHHHHhcC----
Q 024256 31 TFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQN---- 104 (270)
Q Consensus 31 ~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~-~-~~~~Givt~~dl~~~~~~~~---- 104 (270)
..+..+.+++...+++++|+++.+++++++++|+.+|++.|.+++++++||++ + ++++|+++.+|++ .++...
T Consensus 10 ~~~~~~~~~l~~~~v~dim~~~~~vv~v~~~~tv~~a~~~~~~~~~~~~pV~d~~~~~~vGiv~~~Dl~-~~~~~~~~~~ 88 (334)
T 2qrd_G 10 GALKEIQAFIRSRTSYDVLPTSFRLIVFDVTLFVKTSLSLLTLNNIVSAPLWDSEANKFAGLLTMADFV-NVIKYYYQSS 88 (334)
T ss_dssp HHHHHHHHHHHHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSCEEEEETTTTEEEEEECHHHHH-HHHHHHHHHC
T ss_pred HHHHHHHHHHhcCchhhhCCCCCCEEEEcCCCCHHHHHHHHHHcCCeEEEEEeCCCCeEEEEEEHHHHH-HHHHHHhhcc
Confidence 56677777776689999999877899999999999999999999999999999 4 7999999999998 544211
Q ss_pred CCCC------ccchh-------hccCCCC--eeecCCCCHHHHHHHhHhCCCCEEEEEeCCCc-----EEEEEeHHHHHH
Q 024256 105 LPAD------STLVE-------KVMTPNP--ECATIDTPIVDALHIMHDGKFLHLPVVDRDGD-----VVDVVDVIHITH 164 (270)
Q Consensus 105 ~~~~------~~~v~-------~im~~~~--~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~-----~~Givt~~dll~ 164 (270)
.... ..++. ++|.+++ +++++++++.++++.|.+++.+++||+|++|. ++|++|.+|+++
T Consensus 89 ~~~~~~~~~~~~~~~~i~~~l~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~~~~Givt~~dl~~ 168 (334)
T 2qrd_G 89 SFPEAIAEIDKFRLLGLREVERKIGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDVDGETGSEMIVSVLTQYRILK 168 (334)
T ss_dssp SCGGGGGGGGSCBHHHHHHHHHHHTCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEETTTTEEEEEEEEEHHHHHH
T ss_pred CCccHHHHHhhhchhhHHHHHHhhccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeCCCCcCccceEEEeeHHHHHH
Confidence 0110 12233 3466667 99999999999999999999999999997654 999999999998
Q ss_pred HHHHHh----------C-------C------CCCChHHHHHHHHHHHHHHhhccCCCCC--CCccccccccccccCCC--
Q 024256 165 AAVATV----------G-------N------TAGSNNEAASTMMQKFWDSAMALSPNDD--EEDNRSEGSLKFASEGA-- 217 (270)
Q Consensus 165 ~~~~~~----------~-------~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~t~~di~~~~~~~~~-- 217 (270)
...... . . ...++.++...|.......++++.+.+. +.+|.+|+.+.+..+..
T Consensus 169 ~~~~~~~~~~~~~~~v~~l~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~~~~ 248 (334)
T 2qrd_G 169 FISMNCKETAMLRVPLNQMTIGTWSNLATASMETKVYDVIKMLAEKNISAVPIVNSEGTLLNVYESVDVMHLIQDGDYSN 248 (334)
T ss_dssp HHHHHCGGGGGCCCBGGGSSCSBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETHHHHHHHTTSCGGG
T ss_pred HHHhhccchhhhhCcHHHhCCcccCCceEECCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEHHHHHHHhhcccccc
Confidence 764311 0 0 1234456777777666666777764333 33999999987765431
Q ss_pred ---CccccccC------CCCCCCCCCce-------------eEEeecCCCCeeEeecCCCChHHHHHhhhhh
Q 024256 218 ---DTARYLSY------PSPSPGVPSAF-------------AFKVQDNKGLMHRFTCGMLPFPNFIEVTNYE 267 (270)
Q Consensus 218 ---~~~~~~~~------p~~~~~~~~~~-------------~~~VvD~~g~l~~~~vGivs~~Dil~~i~~~ 267 (270)
...+.+.. +..+....... .++|+|++|++ +|+||++||++.+...
T Consensus 249 ~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~l----~Giit~~dil~~~~~~ 316 (334)
T 2qrd_G 249 LDLSVGEALLKRPANFDGVHTCRATDRLDGIFDAIKHSRVHRLFVVDENLKL----EGILSLADILNYIIYD 316 (334)
T ss_dssp GGSBHHHHHTTCCTTCCCCCEECTTCBHHHHHHHHHHSCCCEEEEECTTCBE----EEEEEHHHHHHHHHSC
T ss_pred ccCcHHHHHhcccccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeE----EEEEeHHHHHHHHHhc
Confidence 11334442 33331122221 45699999999 9999999999988653
No 8
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.88 E-value=1.2e-22 Score=177.77 Aligned_cols=232 Identities=15% Similarity=0.158 Sum_probs=170.9
Q ss_pred hHHHHHHHHhhCCCCccccccCCCceeEECCCCCHHHHHHHHHHCCCcEEEEEe-C-CEEEEEeeHHHHHHHHHhc---C
Q 024256 30 NTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQ---N 104 (270)
Q Consensus 30 ~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~-~-~~~~Givt~~dl~~~~~~~---~ 104 (270)
.+.+.++.+++...++.++|.++.++++++.++|+.+|++.|.+++++++||++ + ++++|++|..|++ ..+.. .
T Consensus 17 ~~~~~~i~~~l~~~~~~d~m~~~~~~v~v~~~~sv~~a~~~m~~~~~~~~pV~d~~~~~lvGilt~~Dl~-~~l~~~~~~ 95 (323)
T 3t4n_C 17 QLAVESIRKFLNSKTSYDVLPVSYRLIVLDTSLLVKKSLNVLLQNSIVSAPLWDSKTSRFAGLLTTTDFI-NVIQYYFSN 95 (323)
T ss_dssp HHHHHHHHHHHHHSBHHHHSCSEEEEEEEETTSBHHHHHHHHHHTTCSCEEEEETTTTEEEEEECHHHHH-HHHHHHHHC
T ss_pred HHHHHHHHHHHHhCchHhhCCCCCcEEEEcCCCcHHHHHHHHHHcCCceEEEEeCCCCeEEEEEEHHHHH-HHHHHHHcC
Confidence 366777888878889999999988999999999999999999999999999999 3 5999999999998 54421 0
Q ss_pred CC-------CCccchhh------ccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCc-----EEEEEeHHHHHHHH
Q 024256 105 LP-------ADSTLVEK------VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGD-----VVDVVDVIHITHAA 166 (270)
Q Consensus 105 ~~-------~~~~~v~~------im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~-----~~Givt~~dll~~~ 166 (270)
.. .....+.+ +|.++++++++++++.+|++.|.+++++++||+|+++. ++|++|.+|+++.+
T Consensus 96 ~~~~~~l~~~~~~~v~~i~~~~~~~~~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~~~~~l~Givt~~di~~~l 175 (323)
T 3t4n_C 96 PDKFELVDKLQLDGLKDIERALGVDQLDTASIHPSRPLFEACLKMLESRSGRIPLIDQDEETHREIVVSVLTQYRILKFV 175 (323)
T ss_dssp GGGGGGGGGCBHHHHHHHHHHTTC----CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTTCCEEEEEEEEHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHhCCCCCCceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCCCccceEEEecHHHHHHHH
Confidence 00 00123333 45788999999999999999999999999999998775 99999999999875
Q ss_pred HHHh----------------C-------CCCCChHHHHHHHHHHHHHHhhccCCCCC--CCccccccccccccCCC----
Q 024256 167 VATV----------------G-------NTAGSNNEAASTMMQKFWDSAMALSPNDD--EEDNRSEGSLKFASEGA---- 217 (270)
Q Consensus 167 ~~~~----------------~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~t~~di~~~~~~~~~---- 217 (270)
.... . ....++.++...|.+.....++++.+.+. +.+|.+|+.+.+.....
T Consensus 176 ~~~~~~~~~~~~~v~~~~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~~~~~~~ 255 (323)
T 3t4n_C 176 ALNCRETHFLKIPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGGIYNDLS 255 (323)
T ss_dssp HHHCGGGGGCCSBGGGTTCSBCTTCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETTHHHHHHHTTHHHHTT
T ss_pred HhcCCchhhhhCcHHHcCCCCCCCcEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHHhhchhhhcc
Confidence 4221 0 12234556777777777777777765433 33999999988765431
Q ss_pred -CccccccC------CCCCCCCCCce-------------eEEeecCCCCeeEeecCCCChHHHHHhhhh
Q 024256 218 -DTARYLSY------PSPSPGVPSAF-------------AFKVQDNKGLMHRFTCGMLPFPNFIEVTNY 266 (270)
Q Consensus 218 -~~~~~~~~------p~~~~~~~~~~-------------~~~VvD~~g~l~~~~vGivs~~Dil~~i~~ 266 (270)
...+.+.. +..+....... .++|+|++|++ +|+||++||++.+..
T Consensus 256 ~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~~~l----~Giit~~Dil~~l~~ 320 (323)
T 3t4n_C 256 LSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRL----VGVLTLSDILKYILL 320 (323)
T ss_dssp SBHHHHGGGSCTTCCCCEEECTTCBHHHHHHHHHHSCCCEEEEECTTSBE----EEEEEHHHHHHHHHH
T ss_pred CCHHHHHhhccccCCCCEEECCCCCHHHHHHHHHHhCCCEEEEECCCCcE----EEEEEHHHHHHHHHh
Confidence 11344443 33331122221 46699999999 999999999999854
No 9
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.88 E-value=3.9e-22 Score=155.14 Aligned_cols=134 Identities=16% Similarity=0.184 Sum_probs=112.3
Q ss_pred hhHHHHHHHHhhCCCCccccccCCCceeEECCCCCHHHHHHHHHHCCCcEEEEEe-C-CEEEEEeeHHHHHHHHHhcCCC
Q 024256 29 PNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQNLP 106 (270)
Q Consensus 29 ~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~-~-~~~~Givt~~dl~~~~~~~~~~ 106 (270)
+..++..... +...+++++|++..+++++++++|+.+|++.|.+++++++||++ + |+++|++|.+|++ +.+..+.
T Consensus 10 e~~~i~~~~~-l~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~-~~~~~~~- 86 (148)
T 3lv9_A 10 EQRLVDNIFE-FEEKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLY-NQKINEN- 86 (148)
T ss_dssp --------CG-GGTCBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHH-HHHHHHS-
T ss_pred HHHHHHHHhc-cCCCCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHH-HHHhcCC-
Confidence 3355555533 35778999999655899999999999999999999999999999 5 8999999999998 5544332
Q ss_pred CCccchhhccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHHHH
Q 024256 107 ADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 168 (270)
Q Consensus 107 ~~~~~v~~im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~ 168 (270)
..+++++| ++++++++++++.+|++.|.+++.+.+||+|++|+++|+||..|++++++.
T Consensus 87 --~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~~ 145 (148)
T 3lv9_A 87 --KIELEEIL-RDIIYISENLTIDKALERIRKEKLQLAIVVDEYGGTSGVVTIEDILEEIVG 145 (148)
T ss_dssp --CCCGGGTC-BCCEEEETTSBHHHHHHHHHHHTCSEEEEECTTSSEEEEEEHHHHHHHHHH
T ss_pred --CccHHHhc-CCCeEECCCCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhC
Confidence 46899999 889999999999999999999999999999988999999999999998654
No 10
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.88 E-value=1.3e-22 Score=161.63 Aligned_cols=128 Identities=24% Similarity=0.266 Sum_probs=110.2
Q ss_pred HHHHhhCCCCccccccCCCceeEECCCCCHHHHHHHHHHCCCcEEEEEe-CCEEEEEeeHHHHHHHHHhcCC--------
Q 024256 35 TLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNL-------- 105 (270)
Q Consensus 35 ~~~~~~~~~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~-~~~~~Givt~~dl~~~~~~~~~-------- 105 (270)
++...+...+|+++|+ ++++++++++|+.+|++.|.+++++++||+| +|+++|+||.+|++ +......
T Consensus 10 ~~~~~l~~~~V~diM~--~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dll-~~~~~~~~~~~~~~~ 86 (170)
T 4esy_A 10 AIARAIRQVPIRDILT--SPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQNGHLVGIITESDFL-RGSIPFWIYEASEIL 86 (170)
T ss_dssp HHHHHHHTSBGGGGCC--SCCCCEETTSBHHHHHHHHHHTTCSEEEEECTTSCEEEEEEGGGGG-GGTCCTTHHHHHHHH
T ss_pred HHHHHHcCCCHHHhcC--CCCcEECCcCcHHHHHHHHHHcCCeEEEEEcCCccEEEEEEHHHHH-HHHhhccccchhhhh
Confidence 3344456678999999 7899999999999999999999999999999 89999999999997 3221110
Q ss_pred --------------CCCccchhhccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHH
Q 024256 106 --------------PADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAA 166 (270)
Q Consensus 106 --------------~~~~~~v~~im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~ 166 (270)
.....+++++|+++++++++++++.+|+++|.+++++++||+| +|+++|+||.+||++++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~v~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd-~g~lvGivt~~Dil~~l 160 (170)
T 4esy_A 87 SRAIPAPEVEHLFETGRKLTASAVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQ-DGVPVGIVTRRDLLKLL 160 (170)
T ss_dssp TTTSCHHHHHHHHHHHTTCBHHHHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHTTTS
T ss_pred hhccchhhHHhhhccccccchhhhcccCcccCCcchhHHHHHHHHHHcCCcEEEEEE-CCEEEEEEEHHHHHHHH
Confidence 0113579999999999999999999999999999999999998 69999999999999863
No 11
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.87 E-value=7.9e-23 Score=175.20 Aligned_cols=210 Identities=16% Similarity=0.142 Sum_probs=140.4
Q ss_pred CccccccCCCceeEECCCCCHHHHHHHHHHCCCcEEEEEe-CCEEEEEeeHHHHHHHHHhcCCCCCccchhhccCCCCee
Q 024256 44 SLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPEC 122 (270)
Q Consensus 44 ~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~im~~~~~~ 122 (270)
+++++|+ ++++++++++|+.+|++.|.+++++++||++ +|+++|+++..|++ +.. ...+++++|.+++++
T Consensus 2 ~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~pV~d~~~~~~Giv~~~dl~-~~~------~~~~v~~~m~~~~~~ 72 (282)
T 2yzq_A 2 RVKTIMT--QNPVTITLPATRNYALELFKKYKVRSFPVVNKEGKLVGIISVKRIL-VNP------DEEQLAMLVKRDVPV 72 (282)
T ss_dssp BHHHHSE--ESCCCEESSCC------------CCEEEEECTTCCEEEEEESSCC-----------------CCCBSCCCE
T ss_pred chHHhcc--CCCeEECCCCcHHHHHHHHHHcCCCeEEEEcCCCcEEEEEEHHHHH-hhh------ccCCHHHHcCCCCcE
Confidence 5789998 6899999999999999999999999999999 89999999999997 333 146899999998999
Q ss_pred ecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHH-HHHHH-------hCC----------CCCChHHHHHHH
Q 024256 123 ATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITH-AAVAT-------VGN----------TAGSNNEAASTM 184 (270)
Q Consensus 123 v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~-~~~~~-------~~~----------~~~~~~~~~~~~ 184 (270)
+++++++.++++.|.+++.+.+||+|++|+++|++|..|+++ .+... ... ...++.++...+
T Consensus 73 v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~di~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~ 152 (282)
T 2yzq_A 73 VKENDTLKKAAKLMLEYDYRRVVVVDSKGKPVGILTVGDIIRRYFAKSEKYKGVEIEPYYQRYVSIVWEGTPLKAALKAL 152 (282)
T ss_dssp EETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTTCSGGGGCBSTTTSBSCCCCEETTSBHHHHHHHH
T ss_pred ECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHhccCCcccCcHHHHhCCCCEEECCCCCHHHHHHHH
Confidence 999999999999999999999999998899999999999998 43210 000 112334555555
Q ss_pred HHHHHHHhhccCCCCC--CCccccccc------cccc------cC----------------------CCCccccccCCCC
Q 024256 185 MQKFWDSAMALSPNDD--EEDNRSEGS------LKFA------SE----------------------GADTARYLSYPSP 228 (270)
Q Consensus 185 ~~~~~~~~~~~~~~~~--~~~t~~di~------~~~~------~~----------------------~~~~~~~~~~p~~ 228 (270)
.......++++.+.+. +.+|..|+. +.+. .. ....+..|+.+..
T Consensus 153 ~~~~~~~l~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~ 232 (282)
T 2yzq_A 153 LLSNSMALPVVDSEGNLVGIVDETDLLRDSEIVRIMKSTELAASSEEEWILESHPTLLFEKFELQLPNKPVAEIMTRDVI 232 (282)
T ss_dssp HTCSSSEEEEECTTSCEEEEEEGGGGGGCGGGCC--------------------------------CCCBGGGTCBSSCC
T ss_pred HHcCCcEEEEEcCCCeEEEEEEHHHHhhhhhhhhhhccchhhhhhhhhhhcccchHHHHhHhhhhhccCCHHHhcCCCCc
Confidence 5544555666653332 238999998 5542 10 0112556666666
Q ss_pred CCCCCCce-------------eEEeecCCCCeeEeecCCCChHHHHHhhhh
Q 024256 229 SPGVPSAF-------------AFKVQDNKGLMHRFTCGMLPFPNFIEVTNY 266 (270)
Q Consensus 229 ~~~~~~~~-------------~~~VvD~~g~l~~~~vGivs~~Dil~~i~~ 266 (270)
+.....+. .++|+|++|++ +|+||++|+++.+..
T Consensus 233 ~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~l----vGiit~~Dil~~~~~ 279 (282)
T 2yzq_A 233 VATPHMTVHEVALKMAKYSIEQLPVIRGEGDL----IGLIRDFDLLKVLVK 279 (282)
T ss_dssp CBCTTSBHHHHHHHHHHHTCSEEEEEETTTEE----EEEEEHHHHGGGGCC
T ss_pred eeCCCCCHHHHHHHHHHcCcceeEEECCCCCE----EEEEeHHHHHHHHHh
Confidence 53333322 56699999999 999999999998764
No 12
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.87 E-value=6.5e-22 Score=150.58 Aligned_cols=124 Identities=15% Similarity=0.184 Sum_probs=108.3
Q ss_pred hCCCCccccccCCCceeEECCCCCHHHHHHHHHHCCCcEEEEEe-C-CEEEEEeeHHHHHHHHHhcCCCCCccchhhccC
Q 024256 40 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQNLPADSTLVEKVMT 117 (270)
Q Consensus 40 ~~~~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~-~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~~im~ 117 (270)
+...+++++|++..+++++++++|+.+|++.|.+++++++||++ + |+++|++|.+|++ +....+. ...+++++|+
T Consensus 3 l~~~~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~-~~~~~~~--~~~~v~~~m~ 79 (130)
T 3i8n_A 3 AQDVPVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELF-KMQQSGS--GQKQLGAVMR 79 (130)
T ss_dssp ----CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHH-HHHHTTT--TTSBHHHHSE
T ss_pred cCcCCHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHH-HHHhcCC--CcCCHHHHhc
Confidence 34668999999766788999999999999999999999999999 5 8999999999998 6665443 2468999995
Q ss_pred CCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHHH
Q 024256 118 PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 167 (270)
Q Consensus 118 ~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~~ 167 (270)
++.++++++++.+|++.|.+++.+.+||+|++|+++|+||..|++++++
T Consensus 80 -~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~vGivt~~dil~~l~ 128 (130)
T 3i8n_A 80 -PIQVVLNNTALPKVFDQMMTHRLQLALVVDEYGTVLGLVTLEDIFEHLV 128 (130)
T ss_dssp -ECCEEETTSCHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred -CCcCcCCCCcHHHHHHHHHHcCCeEEEEEcCCCCEEEEEEHHHHHHHHc
Confidence 5789999999999999999999999999998999999999999998743
No 13
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.87 E-value=6.5e-22 Score=155.49 Aligned_cols=128 Identities=15% Similarity=0.204 Sum_probs=111.9
Q ss_pred hHHHHHHHHhhCCCCccccccCCCceeEECCCCCHHHHHHHHHHCCCcEEEEEe-C-CEEEEEeeHHHHHHHHHhcCCCC
Q 024256 30 NTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQNLPA 107 (270)
Q Consensus 30 ~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~-~-~~~~Givt~~dl~~~~~~~~~~~ 107 (270)
..++..+.+ +...+++++|+++++++++++++|+.+|++.|.+++++++||++ + ++++|+||.+|++ +.+..+
T Consensus 26 ~~~i~~~~~-l~~~~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~-~~~~~~--- 100 (156)
T 3oi8_A 26 LLRLEKVLD-FSDLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLL-KYMFNP--- 100 (156)
T ss_dssp HHHHHHHHH-HTTCBGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGG-GGSSCG---
T ss_pred HHHHHHHhc-cCCCCHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHH-HHHHcC---
Confidence 466666654 45789999999655899999999999999999999999999999 5 5999999999997 544332
Q ss_pred CccchhhccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHH
Q 024256 108 DSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHIT 163 (270)
Q Consensus 108 ~~~~v~~im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll 163 (270)
...+++++|++ ++++++++++.+|++.|.+++.+.+||+|++|+++|+||..||+
T Consensus 101 ~~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g~~~Givt~~Dil 155 (156)
T 3oi8_A 101 EQFHLKSILRP-AVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGLVTFEDII 155 (156)
T ss_dssp GGCCHHHHCBC-CCEEETTSBHHHHHHHHHHTTCCEEEEECTTSSEEEEEEHHHHC
T ss_pred CcccHHHHcCC-CEEECCCCCHHHHHHHHHhcCCeEEEEECCCCCEEEEEEHHHhc
Confidence 35789999975 88999999999999999999999999999999999999999986
No 14
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.86 E-value=2.4e-22 Score=154.29 Aligned_cols=123 Identities=20% Similarity=0.233 Sum_probs=108.2
Q ss_pred CCccccccCCCceeEECCCCCHHHHHHHHHHCCCcEEEEEe-C-CEEEEEeeHHHHHHHHHhcCCCCCccchhhccCCCC
Q 024256 43 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNP 120 (270)
Q Consensus 43 ~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~-~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~~im~~~~ 120 (270)
.+++++|+|.++++++++++|+.+|+++|.+++++++||++ + |+++|+||.+|++ +.+.... ....+++++|++ +
T Consensus 3 ~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~-~~~~~~~-~~~~~v~~~m~~-~ 79 (136)
T 3lfr_A 3 LQVRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLL-PLILKAD-GDSDDVKKLLRP-A 79 (136)
T ss_dssp CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGG-GGGGSSS-GGGCCGGGTCBC-C
T ss_pred CChHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHH-HHHHhcc-CCCcCHHHHcCC-C
Confidence 47899999766789999999999999999999999999999 5 7999999999997 5554322 235789999976 8
Q ss_pred eeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHHHH
Q 024256 121 ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 168 (270)
Q Consensus 121 ~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~ 168 (270)
+++++++++.+|++.|.+++.+.+||+|++|+++|+||..|+++++..
T Consensus 80 ~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~~ 127 (136)
T 3lfr_A 80 TFVPESKRLNVLLREFRANHNHMAIVIDEYGGVAGLVTIEDVLEQIVG 127 (136)
T ss_dssp CEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHTTC--
T ss_pred eEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhC
Confidence 899999999999999999999999999989999999999999987543
No 15
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.86 E-value=9.1e-21 Score=144.45 Aligned_cols=125 Identities=28% Similarity=0.407 Sum_probs=112.5
Q ss_pred CCCCccccccCCCceeEECCCCCHHHHHHHHHHCCCcEEEEEeCCEEEEEeeHHHHHHHHHhcCCCCCccchhhccCCCC
Q 024256 41 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNP 120 (270)
Q Consensus 41 ~~~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~im~~~~ 120 (270)
...+++++|. ++++++++++|+.+|++.|.+++.+++||+++|+++|+++.+|++ +.+..+... ..+++++|.+++
T Consensus 2 ~~~~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~-~~~~~~~~~-~~~v~~~~~~~~ 77 (133)
T 2ef7_A 2 EEEIVKEYMK--TQVISVTKDAKLNDIAKVMTEKNIGSVIVVDGNKPVGIITERDIV-KAIGKGKSL-ETKAEEFMTASL 77 (133)
T ss_dssp CCCBGGGTSB--CSCCEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHH-HHHHTTCCT-TCBGGGTSEECC
T ss_pred CcccHHHhcc--CCCEEECCCCcHHHHHHHHHhcCCCEEEEEECCEEEEEEcHHHHH-HHHhcCCCc-ccCHHHHcCCCC
Confidence 3568999999 579999999999999999999999999999999999999999997 666655433 478999999999
Q ss_pred eeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHHHHH
Q 024256 121 ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVAT 169 (270)
Q Consensus 121 ~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~~ 169 (270)
.++++++++.++++.|.+++.+++||+|++|+++|+||..|+++++...
T Consensus 78 ~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~~ 126 (133)
T 2ef7_A 78 ITIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITRAIDDM 126 (133)
T ss_dssp CCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHH
T ss_pred EEECCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHHH
Confidence 9999999999999999999999999999889999999999999875543
No 16
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.86 E-value=2e-21 Score=152.40 Aligned_cols=137 Identities=19% Similarity=0.210 Sum_probs=116.2
Q ss_pred HHHHHHHhhCCCCccccccCCCceeEECCCCCHHHHHHHHHHCCCcEEEEEe-CCEEEEEeeHHHHHHHHHhcCCCC---
Q 024256 32 FIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPA--- 107 (270)
Q Consensus 32 ~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~-~~~~~Givt~~dl~~~~~~~~~~~--- 107 (270)
++......+...+++++|+|.++++++++++|+.+|++.|.+++++++||++ +|+++|++|.+|++ +.+..+...
T Consensus 4 ~~~~~~~~l~~~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~-~~~~~~~~~~~~ 82 (156)
T 3ctu_A 4 MIAKEFETFLLGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIM-AYQMEHDLSQEI 82 (156)
T ss_dssp HHHHHHHHHHHTTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC-CBEEEEEEHHHHH-HHHHHHTCCHHH
T ss_pred cccHHHHHHHHHHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCCCEEEEEEcHHHHH-HHHHhccccccc
Confidence 3444455566788999999877899999999999999999999999999999 89999999999998 555432211
Q ss_pred -CccchhhccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHHHHHhC
Q 024256 108 -DSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVG 171 (270)
Q Consensus 108 -~~~~v~~im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~~~~ 171 (270)
...+++++|+++++++++++++.+|++.|.+++ ++||+|++|+++|+||..|+++++...+.
T Consensus 83 ~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~~g~~~Giit~~dil~~l~~~~~ 145 (156)
T 3ctu_A 83 MADTDIVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVNALLH 145 (156)
T ss_dssp HTTSBGGGGCBCSCCCBCSSCCHHHHHHHTTTSS--EEEEECTTSBEEEEEETTHHHHHHHHHSC
T ss_pred cccCcHHHhccCCceeeCCCCcHHHHHHHHHHcC--eEEEEcCCCeEEEEEEHHHHHHHHHHHHH
Confidence 146899999999999999999999999999876 79999988999999999999998665543
No 17
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.86 E-value=1.2e-21 Score=148.90 Aligned_cols=121 Identities=16% Similarity=0.204 Sum_probs=107.4
Q ss_pred CCCccccccCCCceeEECCCCCHHHHHHHHHHCCCcEEEEEe-C-CEEEEEeeHHHHHHHHHhcCCCCCccchhhccCCC
Q 024256 42 RPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQNLPADSTLVEKVMTPN 119 (270)
Q Consensus 42 ~~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~-~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~~im~~~ 119 (270)
..+++++|+|.++++++++++|+.+|++.|.+++++++||++ + |+++|++|.+|++ +.... ...+++++|++
T Consensus 4 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~-~~~~~----~~~~v~~~m~~- 77 (129)
T 3jtf_A 4 ERTVADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLL-RYMLE----PALDIRSLVRP- 77 (129)
T ss_dssp CCBHHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGG-GGGTC----TTSCGGGGCBC-
T ss_pred CCCHHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHH-hHhcc----CCcCHHHHhCC-
Confidence 457999999766789999999999999999999999999999 4 8999999999997 54432 24689999965
Q ss_pred CeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHHHH
Q 024256 120 PECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 168 (270)
Q Consensus 120 ~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~ 168 (270)
++++++++++.+|++.|.+++.+.+||+|++|+++|+||..|++++++.
T Consensus 78 ~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~g~~~Giit~~Dil~~l~g 126 (129)
T 3jtf_A 78 AVFIPEVKRLNVLLREFRASRNHLAIVIDEHGGISGLVTMEDVLEQIVG 126 (129)
T ss_dssp CCEEETTCBHHHHHHHHHTSSCCEEEEECC-CCEEEEEEHHHHHHHHHH
T ss_pred CeEeCCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhC
Confidence 7899999999999999999999999999988999999999999998654
No 18
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.86 E-value=2.8e-21 Score=154.68 Aligned_cols=135 Identities=13% Similarity=0.122 Sum_probs=115.1
Q ss_pred hhHHHHHHHHhhCCCCccccccCCCceeEECCCCCHHHHHHHHHHCCCcEEEEEe-C-CEEEEEeeHHHHHHHHHhcCCC
Q 024256 29 PNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQNLP 106 (270)
Q Consensus 29 ~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~-~-~~~~Givt~~dl~~~~~~~~~~ 106 (270)
+..++..+... ...+|+++|+|+++++++++++|+.+|++.|.+++++++||++ + ++++|+|+.+|++ +....+.
T Consensus 23 e~~~i~~~l~l-~~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~-~~~~~~~- 99 (173)
T 3ocm_A 23 ERNMVSGVLTL-AERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLV-ADLITEG- 99 (173)
T ss_dssp HHHHHHHHHHH-TTSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHHH-HHHHHHS-
T ss_pred HHHHHHHHhcc-CCCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHHH-HHHhcCC-
Confidence 34666666544 5779999998766899999999999999999999999999998 5 7999999999998 5544321
Q ss_pred CCccchhhccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHHHHHh
Q 024256 107 ADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 170 (270)
Q Consensus 107 ~~~~~v~~im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~~~ 170 (270)
..+++ + .++++++++++++.+|++.|.+++.+.+||+|++|+++|+||..||++.+...+
T Consensus 100 --~~~v~-~-~~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde~g~lvGiIT~~Dil~~l~~~i 159 (173)
T 3ocm_A 100 --RVRRN-R-LRDPIIVHESIGILRLMDTLKRSRGQLVLVADEFGAIEGLVTPIDVFEAIAGEF 159 (173)
T ss_dssp --SCCGG-G-SBCCCEECGGGCHHHHHHHHHHSTTCCEEEECTTCCEEEEECHHHHHHHHHCCC
T ss_pred --cchhH-h-cCCCeEECCCCcHHHHHHHHHHcCCeEEEEEeCCCCEEEEEeHHHHHHHHhCcC
Confidence 35677 4 477889999999999999999999999999998999999999999999865433
No 19
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.86 E-value=8.6e-21 Score=149.38 Aligned_cols=135 Identities=20% Similarity=0.227 Sum_probs=117.6
Q ss_pred HHHHHhhCCCCccccccCCCceeEECCCCCHHHHHHHHHHCCCcEEEEEe-CCEEEEEeeHHHHHHHHHhcCCCCCccch
Q 024256 34 ETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLV 112 (270)
Q Consensus 34 ~~~~~~~~~~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~-~~~~~Givt~~dl~~~~~~~~~~~~~~~v 112 (270)
..+.+.+...+++++|+ + ++++++++|+.+|++.|.+++++++||++ +|+++|+||.+|++ +.+..+......++
T Consensus 8 ~~l~~~l~~~~v~~im~--~-~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~-~~~~~~~~~~~~~v 83 (159)
T 3fv6_A 8 QLLADKLKKLQVKDFQS--I-PVVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLL-RASIGQQELTSVPV 83 (159)
T ss_dssp HHHHHHHTTCBGGGSCB--C-CCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHH-HHHTSCSCTTTCBG
T ss_pred HHHHHHHhhCCHHHHcC--C-CEEECCCCcHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHH-HHhhccCcccCcCH
Confidence 34455666779999999 4 45999999999999999999999999999 89999999999998 65544444446799
Q ss_pred hhccCC--CCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCC---cEEEEEeHHHHHHHHHHHhCC
Q 024256 113 EKVMTP--NPECATIDTPIVDALHIMHDGKFLHLPVVDRDG---DVVDVVDVIHITHAAVATVGN 172 (270)
Q Consensus 113 ~~im~~--~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g---~~~Givt~~dll~~~~~~~~~ 172 (270)
.++|++ +++++++++++.+|++.|.+++++++||+|++| +++|+||..||++++......
T Consensus 84 ~~~m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit~~dil~~l~~~~~~ 148 (159)
T 3fv6_A 84 HIIMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKTNMTKILVSLSEN 148 (159)
T ss_dssp GGTSEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSEEEEEEEEHHHHHHHHHHHHTT
T ss_pred HHHHcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcceeEEEEEEHHHHHHHHHHHhhc
Confidence 999998 889999999999999999999999999999888 999999999999987665543
No 20
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.86 E-value=1.1e-21 Score=148.79 Aligned_cols=120 Identities=18% Similarity=0.261 Sum_probs=106.6
Q ss_pred CCccccccCCCceeEECCCCCHHHHHHHHHHCCCcEEEEEe-C-CEEEEEeeHHHHHHHHHhcCCCCCccchhhccCCCC
Q 024256 43 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNP 120 (270)
Q Consensus 43 ~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~-~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~~im~~~~ 120 (270)
.+++++|++.++++++++++|+.+|++.|.+++++++||++ + |+++|++|.+|++ +.+.... ...+++++|++ +
T Consensus 3 ~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~-~~~~~~~--~~~~v~~~m~~-~ 78 (127)
T 3nqr_A 3 QRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLL-PFMRSDA--EAFSMDKVLRT-A 78 (127)
T ss_dssp CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGG-GGGSTTC--CCCCHHHHCBC-C
T ss_pred cCHHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHH-HHHhccC--CCCCHHHHcCC-C
Confidence 47899999645699999999999999999999999999999 5 7999999999997 5543322 35689999965 7
Q ss_pred eeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHH
Q 024256 121 ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAA 166 (270)
Q Consensus 121 ~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~ 166 (270)
.++++++++.+|++.|.+++.+++||+|++|+++|+||..|+++++
T Consensus 79 ~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Giit~~dll~~l 124 (127)
T 3nqr_A 79 VVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELI 124 (127)
T ss_dssp CEEETTCBHHHHHHHHHHTTCCEEEEECTTSCEEEEEEHHHHHHHC
T ss_pred eEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHH
Confidence 7999999999999999999999999999999999999999999873
No 21
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.86 E-value=8.8e-21 Score=142.77 Aligned_cols=119 Identities=22% Similarity=0.233 Sum_probs=109.2
Q ss_pred CccccccCCCceeEECCCCCHHHHHHHHHHCCCcEEEEEeCCEEEEEeeHHHHHHHHHhcCCCCCccchhhccCCCCeee
Q 024256 44 SLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECA 123 (270)
Q Consensus 44 ~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~im~~~~~~v 123 (270)
+++++|. ++++++++++|+.+|++.|.+++.+++||+++|+++|+++.+|++ +.+.++......+++++|.+++.++
T Consensus 2 ~v~~~m~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~G~it~~dl~-~~~~~~~~~~~~~v~~~m~~~~~~v 78 (125)
T 1pbj_A 2 RVEDVMV--TDVDTIDITASLEDVLRNYVENAKGSSVVVKEGVRVGIVTTWDVL-EAIAEGDDLAEVKVWEVMERDLVTI 78 (125)
T ss_dssp CHHHHCB--CSCCEEETTCBHHHHHHHHHHHCCCEEEEEETTEEEEEEEHHHHH-HHHHHTCCTTTSBHHHHCBCGGGEE
T ss_pred CHHHhcC--CCceEECCCCcHHHHHHHHHHcCCCEEEEEeCCeeEEEEeHHHHH-HHHhcCCcccccCHHHHcCCCCeEE
Confidence 6789999 689999999999999999999999999999999999999999998 6666555444678999999999999
Q ss_pred cCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHH
Q 024256 124 TIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAA 166 (270)
Q Consensus 124 ~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~ 166 (270)
++++++.++++.|.+++.+.+||+|+ |+++|+||..|+++++
T Consensus 79 ~~~~~l~~~~~~~~~~~~~~l~Vvd~-~~~~Gvit~~dl~~~l 120 (125)
T 1pbj_A 79 SPRATIKEAAEKMVKNVVWRLLVEED-DEIIGVISATDILRAK 120 (125)
T ss_dssp CTTSCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHH
T ss_pred CCCCCHHHHHHHHHhcCCcEEEEEEC-CEEEEEEEHHHHHHHH
Confidence 99999999999999999999999997 9999999999999863
No 22
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.86 E-value=2.5e-21 Score=151.53 Aligned_cols=133 Identities=16% Similarity=0.166 Sum_probs=114.4
Q ss_pred HHHHHHHHhhCCCCccccccCCCceeEECCCCCHHHHHHHHHHCCCcEEEEE-e--CCEEEEEeeHHHHHHHHHhcCCCC
Q 024256 31 TFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVT-V--ENKPRGILTSKDILMRVISQNLPA 107 (270)
Q Consensus 31 ~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv-~--~~~~~Givt~~dl~~~~~~~~~~~ 107 (270)
.++.+..+. ...+++++|+++++++++++++|+.+|++.|.+++++++||+ + +|+++|+||.+|++ +.+..+.
T Consensus 9 ~~i~~~~~l-~~~~v~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~-~~~~~~~-- 84 (153)
T 3oco_A 9 NFMQRAFEM-NDKVASDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIV-RQARIDD-- 84 (153)
T ss_dssp CHHHHHHHH-HHCBHHHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHH-HHHHHHT--
T ss_pred HHHHHhccc-CCCEeeeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHH-hHHhcCC--
Confidence 455555433 456899999954589999999999999999999999999999 5 48999999999998 5544332
Q ss_pred CccchhhccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHHHHH
Q 024256 108 DSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVAT 169 (270)
Q Consensus 108 ~~~~v~~im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~~ 169 (270)
..+++++| ++++++++++++.+|++.|.+++.+.+||+|++|+++|+||..||++++...
T Consensus 85 -~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~~vGivt~~dil~~l~~~ 144 (153)
T 3oco_A 85 -KAKISTIM-RDIVSVPENMKVPDVMEEMSAHRVPMAIVIDEYGGTSGIITDKDVYEELFGN 144 (153)
T ss_dssp -TSBGGGTC-BCCEEEETTSBHHHHHHHHHHTTCSCEEEECTTSCEEEEECHHHHHHHHHC-
T ss_pred -CCcHHHHh-CCCeEECCCCCHHHHHHHHHHcCCcEEEEEeCCCCEEEEeeHHHHHHHHhcc
Confidence 46899999 8999999999999999999999999999999889999999999999986543
No 23
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.86 E-value=2.8e-21 Score=146.53 Aligned_cols=121 Identities=13% Similarity=0.082 Sum_probs=109.1
Q ss_pred CCCccccccCCCceeEECCCCCHHHHHHHHHHCCCcEEEEEeCCEEEEEeeHHHHHHHHHhcCCCCCccchhhccCCCCe
Q 024256 42 RPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPE 121 (270)
Q Consensus 42 ~~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~im~~~~~ 121 (270)
..+++++|. ++++++++++++.+|++.|.+++++++||+++|+++|++|.+|++ +.+..+.. ...+++++|.+++.
T Consensus 4 s~~v~~~m~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~-~~~~~~~~-~~~~v~~~m~~~~~ 79 (128)
T 3gby_A 4 SVTFSYLAE--TDYPVFTLGGSTADAARRLAASGCACAPVLDGERYLGMVHLSRLL-EGRKGWPT-VKEKLGEELLETVR 79 (128)
T ss_dssp TCBGGGGCB--CCSCCEETTSBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHH-TTCSSSCC-TTCBCCGGGCBCCC
T ss_pred ceEHHHhhc--CCcceECCCCCHHHHHHHHHHCCCcEEEEEECCEEEEEEEHHHHH-HHHhhCCc-ccCcHHHHccCCCc
Confidence 457999999 689999999999999999999999999999999999999999997 55443322 12679999999999
Q ss_pred eecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHH
Q 024256 122 CATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAA 166 (270)
Q Consensus 122 ~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~ 166 (270)
++++++++.++++.|.+++.+++||+|++|+++|+||..|+++++
T Consensus 80 ~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~~~Giit~~dll~~l 124 (128)
T 3gby_A 80 SYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILGFL 124 (128)
T ss_dssp CBCTTSBGGGSHHHHHHCSSSEEEEECTTCBEEEEEEHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHhCCCcEEEEECCCCCEEEEEEHHHHHHHH
Confidence 999999999999999999999999999899999999999999874
No 24
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.85 E-value=9.1e-21 Score=142.18 Aligned_cols=116 Identities=25% Similarity=0.307 Sum_probs=106.7
Q ss_pred CccccccCCCceeEECCCCCHHHHHHHHHHCCCcEEEEEe-CCEEEEEeeHHHHHHHHHhcCCCCCccchhhccCCCCee
Q 024256 44 SLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPEC 122 (270)
Q Consensus 44 ~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~im~~~~~~ 122 (270)
+++++|. ++++++++++|+.+|++.|.+++.+++||++ +|+++|+++.+|++ +.+..+ ..+++++|.+++.+
T Consensus 2 ~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~-~~~~~~----~~~v~~~~~~~~~~ 74 (122)
T 3kpb_A 2 LVKDILS--KPPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIA-KALAQN----KKTIEEIMTRNVIT 74 (122)
T ss_dssp BHHHHCC--SCCCCEETTSBHHHHHHHHHHHTCSCEEEECTTSBEEEEECHHHHH-HHHHTT----CCBGGGTSBSSCCC
T ss_pred chHHhhC--CCCEEeCCCCcHHHHHHHHHHcCCCeEEEECCCCCEEEEEEHHHHH-HHHHhc----ccCHHHHhcCCCeE
Confidence 6889999 6799999999999999999999999999999 89999999999998 666543 23899999999999
Q ss_pred ecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHH
Q 024256 123 ATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAA 166 (270)
Q Consensus 123 v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~ 166 (270)
+++++++.++++.|.+++.+++||+|++|+++|+||..||++++
T Consensus 75 v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Givt~~dl~~~l 118 (122)
T 3kpb_A 75 AHEDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRLF 118 (122)
T ss_dssp EETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHH
T ss_pred ECCCCCHHHHHHHHHHhCCCeEEEECCCCCEEEEEeHHHHHHHh
Confidence 99999999999999999999999999889999999999999863
No 25
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.85 E-value=3.7e-21 Score=149.73 Aligned_cols=130 Identities=18% Similarity=0.175 Sum_probs=112.6
Q ss_pred HhhCCCCccccccCCCceeEECCCCCHHHHHHHHHHCCCcEEEEEe-CCEEEEEeeHHHHHHHHHhcCC-----CCCccc
Q 024256 38 ERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNL-----PADSTL 111 (270)
Q Consensus 38 ~~~~~~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~-~~~~~Givt~~dl~~~~~~~~~-----~~~~~~ 111 (270)
+.+...+++++|++.++++++++++|+.+|++.|.+++++++||++ +|+++|+||.+|++ +.+.... .....+
T Consensus 10 ~~l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~-~~~~~~~~~~~~~~~~~~ 88 (150)
T 3lqn_A 10 DEFQQIFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPMYKLHGLISTAMIL-DGILGLERIEFERLEEMK 88 (150)
T ss_dssp HHHHHCBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHH-HHTBCSSSBCGGGGGGCB
T ss_pred HhhhcCChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECCCCCEEEEEEHHHHH-HHHHhhcccchhHHhcCC
Confidence 4445668999999655699999999999999999999999999999 89999999999998 6554221 123578
Q ss_pred hhhccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHHHHHh
Q 024256 112 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 170 (270)
Q Consensus 112 v~~im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~~~ 170 (270)
++++|.+++.++++++++.+|++.|.++++ +||+|++|+++|+||..||++++...+
T Consensus 89 v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~~g~~~Giit~~dil~~l~~~~ 145 (150)
T 3lqn_A 89 VEQVMKQDIPVLKLEDSFAKALEMTIDHPF--ICAVNEDGYFEGILTRRAILKLLNKKV 145 (150)
T ss_dssp GGGTCBSSCCEEETTCBHHHHHHHHHHCSE--EEEECTTCBEEEEEEHHHHHHHHHHHC
T ss_pred HHHHhcCCCceeCCCCCHHHHHHHHHhCCE--EEEECCCCcEEEEEEHHHHHHHHHHHh
Confidence 999999999999999999999999999886 999998999999999999999865543
No 26
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.85 E-value=7.2e-21 Score=145.46 Aligned_cols=123 Identities=27% Similarity=0.465 Sum_probs=109.3
Q ss_pred CccccccCC-CceeEECCCCCHHHHHHHHHHCCCcEEEEEeCCEEEEEeeHHHHHHHHHhcCCCCCccchhhccCCCCee
Q 024256 44 SLSTIIPEK-SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPEC 122 (270)
Q Consensus 44 ~v~~im~~~-~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~im~~~~~~ 122 (270)
+++++|+|+ ++++++++++|+.+|++.|.+++.+++||+++|+++|+++.+|+++++..++......++.++|.+++.+
T Consensus 7 ~v~~im~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~~~~ 86 (135)
T 2rc3_A 7 TVKHLLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMKDEKLVGILTERDFSRKSYLLDKPVKDTQVKEIMTRQVAY 86 (135)
T ss_dssp BHHHHHHHHCCCCCEECTTSBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHGGGSSSCGGGSBGGGTSBCSCCC
T ss_pred eHHHHHhcCCCCcEEECCCCcHHHHHHHHHhcCCCEEEEEECCEEEEEEehHHHHHHHHHcCCCcccCCHHHhccCCCeE
Confidence 689999843 4789999999999999999999999999999999999999999973355444334467899999999999
Q ss_pred ecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHHH
Q 024256 123 ATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 167 (270)
Q Consensus 123 v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~~ 167 (270)
+++++++.++++.|.+++.+++||+| +|+++|+||..|+++++.
T Consensus 87 v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dll~~~~ 130 (135)
T 2rc3_A 87 VDLNNTNEDCMALITEMRVRHLPVLD-DGKVIGLLSIGDLVKDAI 130 (135)
T ss_dssp BCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHH
T ss_pred ECCCCcHHHHHHHHHHhCCCEEEEEe-CCEEEEEEEHHHHHHHHH
Confidence 99999999999999999999999999 799999999999998743
No 27
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.84 E-value=2.1e-20 Score=143.23 Aligned_cols=125 Identities=27% Similarity=0.361 Sum_probs=110.7
Q ss_pred hhCCCCccccccCCCceeEECCCCCHHHHHHHHHHCCCcEEEEEe-CCEEEEEeeHHHH-HHHHHhcCCCCCccchhhcc
Q 024256 39 RMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDI-LMRVISQNLPADSTLVEKVM 116 (270)
Q Consensus 39 ~~~~~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~-~~~~~Givt~~dl-~~~~~~~~~~~~~~~v~~im 116 (270)
.+...+++++|+ ++++++++++|+.+|++.|.+++.+++||++ +|+++|+++.+|+ + +.+..+.. ...+++++|
T Consensus 4 ~l~~~~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~-~~~~~~~~-~~~~v~~~m 79 (138)
T 2p9m_A 4 TLKNIKVKDVMT--KNVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGY-NLIRDKYT-LETTIGDVM 79 (138)
T ss_dssp -CTTCBGGGTSB--CSCCCEETTSBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHHH-HHTTTCCC-SSCBHHHHS
T ss_pred ccccCCHHHhhc--CCceEECCCCcHHHHHHHHHHCCCcEEEEECCCCeEEEEEEHHHHHH-HHHhhccc-CCcCHHHHh
Confidence 455778999998 6789999999999999999999999999999 8999999999999 7 65554333 357899999
Q ss_pred CCCCeeecCCCCHHHHHHHhHhCC-----CCEEEEEeCCCcEEEEEeHHHHHHHHH
Q 024256 117 TPNPECATIDTPIVDALHIMHDGK-----FLHLPVVDRDGDVVDVVDVIHITHAAV 167 (270)
Q Consensus 117 ~~~~~~v~~~~~l~~a~~~~~~~~-----~~~lpVvd~~g~~~Givt~~dll~~~~ 167 (270)
.+++.++++++++.++++.|.+++ .+++||+|++|+++|+||..|+++++.
T Consensus 80 ~~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~ 135 (138)
T 2p9m_A 80 TKDVITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGIISDGDIIRTIS 135 (138)
T ss_dssp CSSCCCEETTSBHHHHHHHHTCC-----CCCEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred CCCcEEECCCCCHHHHHHHHHhcCCccccccEEEEECCCCeEEEEEEHHHHHHHHH
Confidence 999999999999999999999999 999999998899999999999998743
No 28
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.84 E-value=2.1e-20 Score=143.27 Aligned_cols=124 Identities=25% Similarity=0.463 Sum_probs=110.9
Q ss_pred CCCCccccccCCCceeEECCCCCHHHHHHHHHHCCCcEEEEEe-CCEEEEEeeHHHHHHHHHhcCCCCCccchhhccCCC
Q 024256 41 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPN 119 (270)
Q Consensus 41 ~~~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~im~~~ 119 (270)
...+++++|+ ++++++++++|+.+|++.|.+++++++||++ +|+++|+|+..|++++++..+. ....++.++|.++
T Consensus 5 ~~~~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~-~~~~~v~~~m~~~ 81 (138)
T 2yzi_A 5 MKAPIKVYMT--KKLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIRRVIVPGL-PYDIPVERIMTRN 81 (138)
T ss_dssp TTSBGGGTCB--CCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTTCC-CTTSBGGGTCBCS
T ss_pred hhhhHHHHhc--CCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhcCC-cccCCHHHHhhCC
Confidence 4568999999 6899999999999999999999999999999 8999999999999734444433 3357899999999
Q ss_pred CeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHHHH
Q 024256 120 PECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 168 (270)
Q Consensus 120 ~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~ 168 (270)
+.++++++++.++++.|.+++.+++ |+|++|+++|+||..||++++..
T Consensus 82 ~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~~g~~~Giit~~dil~~~~~ 129 (138)
T 2yzi_A 82 LITANVNTPLGEVLRKMAEHRIKHI-LIEEEGKIVGIFTLSDLLEASRR 129 (138)
T ss_dssp CCEEETTSBHHHHHHHHHHHTCSEE-EEEETTEEEEEEEHHHHHHHHHC
T ss_pred CeEECCCCcHHHHHHHHHhcCCCEE-EECCCCCEEEEEEHHHHHHHHHH
Confidence 9999999999999999999999999 99988999999999999997553
No 29
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.84 E-value=1.4e-20 Score=146.54 Aligned_cols=122 Identities=20% Similarity=0.235 Sum_probs=110.3
Q ss_pred CCCCccccccCCCceeEECCCCCHHHHHHHHHHCCCcEEEEEe-CCEEEEEeeHHHHHHHHHhcCCCCCccchhhccCCC
Q 024256 41 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPN 119 (270)
Q Consensus 41 ~~~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~im~~~ 119 (270)
...+++++|.+..+++++++++|+.+|++.|.+++++++||++ +|+++|+||..|++ +.+..+......+++++|+++
T Consensus 26 l~~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~-~~~~~~~~~~~~~v~~~m~~~ 104 (149)
T 3k2v_A 26 LLLRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNIIGIFTDGDLR-RVFDTGVDMRDASIADVMTRG 104 (149)
T ss_dssp TTSBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTTCBEEEEEEHHHHH-HHHCSSSCCTTCBHHHHSEES
T ss_pred cccCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCCCcEEEEecHHHHH-HHHhcCCCcccCcHHHHcCCC
Confidence 3568999999323899999999999999999999999999999 89999999999998 777665554568999999999
Q ss_pred CeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHH
Q 024256 120 PECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITH 164 (270)
Q Consensus 120 ~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~ 164 (270)
+.++++++++.+|++.|.+++.+.+||+|++ +++|+||..||++
T Consensus 105 ~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-~~~Giit~~dil~ 148 (149)
T 3k2v_A 105 GIRIRPGTLAVDALNLMQSRHITCVLVADGD-HLLGVVHMHDLLR 148 (149)
T ss_dssp CCEECTTCBHHHHHHHHHHHTCSEEEEEETT-EEEEEEEHHHHTC
T ss_pred CeEECCCCCHHHHHHHHHHcCCCEEEEecCC-EEEEEEEHHHhhc
Confidence 9999999999999999999999999999965 9999999999974
No 30
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.84 E-value=3.3e-20 Score=142.90 Aligned_cols=119 Identities=22% Similarity=0.360 Sum_probs=108.0
Q ss_pred CCCccccccCCCceeEECCCCCHHHHHHHHHHCCCcEEEEEe-CC--EEEEEeeHHHHHHHHHhcCCCCCccchhhccCC
Q 024256 42 RPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-EN--KPRGILTSKDILMRVISQNLPADSTLVEKVMTP 118 (270)
Q Consensus 42 ~~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~-~~--~~~Givt~~dl~~~~~~~~~~~~~~~v~~im~~ 118 (270)
..+++++|+ ++++++++++|+.+|++.|.+++++++||++ ++ +++|+++.+|++ +.+.++... ..+++++|.+
T Consensus 4 ~~~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~Givt~~dl~-~~~~~~~~~-~~~v~~~m~~ 79 (141)
T 2rih_A 4 AIRTSELLK--RPPVSLPETATIREVATELAKNRVGLAVLTARDNPKRPVAVVSERDIL-RAVAQRLDL-DGPAMPIANS 79 (141)
T ss_dssp -CBGGGGCC--SCCEEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEEEEHHHHH-HHHHTTCCT-TSBSGGGCBC
T ss_pred ceEHHHHhc--CCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCCCcceeEEEEEHHHHH-HHHhcCCCC-CCCHHHHcCC
Confidence 457999999 6899999999999999999999999999999 56 899999999998 666554333 5789999999
Q ss_pred CCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHH
Q 024256 119 NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 165 (270)
Q Consensus 119 ~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~ 165 (270)
++.+++++ ++.+|++.|.+++.+++||+|++|+++|+||..||+++
T Consensus 80 ~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~dll~~ 125 (141)
T 2rih_A 80 PITVLDTD-PVHVAAEKMRRHNIRHVVVVNKNGELVGVLSIRDLCFE 125 (141)
T ss_dssp CCEEETTS-BHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHSC
T ss_pred CCeEEcCC-CHHHHHHHHHHcCCeEEEEEcCCCcEEEEEEHHHHHHH
Confidence 99999999 99999999999999999999988999999999999976
No 31
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.84 E-value=1.1e-20 Score=148.32 Aligned_cols=127 Identities=23% Similarity=0.388 Sum_probs=111.2
Q ss_pred CCccccccCC----CceeEECCCCCHHHHHHHHHHCCCcEEEEEeCCEEEEEeeHHHHHHHHHhcCCCCCccchhhccCC
Q 024256 43 PSLSTIIPEK----SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTP 118 (270)
Q Consensus 43 ~~v~~im~~~----~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~im~~ 118 (270)
.+++++|.++ ++++++++++|+.+|++.|.+++++++||.++|+++|+++.+|+++.+..........+++++|++
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~ 86 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVDGDDIAGIVTERDYARKVVLQERSSKATRVEEIMTA 86 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEEESSSSEEEEEEHHHHHHHSGGGTCCSSSCBHHHHSBS
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEEeeCCEEEEEEEHHHHHHHHHhccCCccccCHHHHcCC
Confidence 4799999865 567999999999999999999999999997799999999999998333333333346799999999
Q ss_pred CCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHHHHHh
Q 024256 119 NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 170 (270)
Q Consensus 119 ~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~~~ 170 (270)
++.++++++++.++++.|.+++++++||+| +|+++|+||..||++++....
T Consensus 87 ~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dil~~l~~~~ 137 (157)
T 4fry_A 87 KVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLIGLISIGDLVKSVIADQ 137 (157)
T ss_dssp SCCCBCTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTTC
T ss_pred CCcEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHHHH
Confidence 999999999999999999999999999999 799999999999999865443
No 32
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.83 E-value=1.6e-22 Score=183.10 Aligned_cols=151 Identities=23% Similarity=0.279 Sum_probs=30.2
Q ss_pred ChhhhhhhHHHHHHHhhhHHhhCCCCCChhHHHHHHHHhhCC-CCccccccCCCceeEECCCCCHHHHHHHHHHCCCcEE
Q 024256 1 MERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETLRERMFR-PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSA 79 (270)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i 79 (270)
||+++|.+||+++|++| |+|++|.|.-+++-.+...+ ++-...|. .+++++.|++|+.+|+++|.+++++.+
T Consensus 100 MDTVTe~~MAIamAr~G-----GiGvIH~n~sie~Qa~~V~~VKr~e~g~i--~dPvtl~P~~Tv~da~~l~~~~~isgv 172 (556)
T 4af0_A 100 MDTVTEDRMAIALALHG-----GLGIIHHNCSAEEQAAMVRRVKKYENGFI--TDPLCLGPDATVGDVLEIKAKFGFCGV 172 (556)
T ss_dssp CTTTCSHHHHHHHHHTT-----CEEEECCSSCHHHHHHHHHHHHHCCC--------------------------------
T ss_pred cccccCHHHHHHHHHCC-----CeEEEcCCCCHHHHHHHHHHHHhcccCcc--CCCeEcCCCCCHHHHHHHHHHhCCCcc
Confidence 89999999999999999 99999998444444332211 12234555 579999999999999999999999999
Q ss_pred EEEe----CCEEEEEeeHHHHHHHHHhcCCCCCccchhhccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEE
Q 024256 80 VVTV----ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVD 155 (270)
Q Consensus 80 ~Vv~----~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~G 155 (270)
||++ +++++||||.+|+ ++. ..+.+++++|++++++++++.++++|.++|.+++++.+||||++|+++|
T Consensus 173 pVvd~g~~~~kLvGIvT~RD~--rf~-----d~~~~V~evMT~~lvt~~~~~~leeA~~iL~~~kieklpVVd~~g~LvG 245 (556)
T 4af0_A 173 PITETGEPDSKLLGIVTGRDV--QFQ-----DAETPIKSVMTTEVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVS 245 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccCcCCEEEEEEecccc--ccc-----ccceEhhhhcccceEEecCCCCHHHHHHHHHHccccceeEEccCCcEEE
Confidence 9998 4689999999998 331 2357999999999999999999999999999999999999999999999
Q ss_pred EEeHHHHHHH
Q 024256 156 VVDVIHITHA 165 (270)
Q Consensus 156 ivt~~dll~~ 165 (270)
+||.+|+++.
T Consensus 246 lIT~kDi~k~ 255 (556)
T 4af0_A 246 LVARSDLLKN 255 (556)
T ss_dssp ----------
T ss_pred EEEechhhhh
Confidence 9999999986
No 33
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.83 E-value=1.6e-20 Score=145.91 Aligned_cols=126 Identities=28% Similarity=0.402 Sum_probs=108.3
Q ss_pred CCCccccccCCCceeEECCCCCHHHHHHHHHHCCCcEEEEEe-CCEEEEEeeHHHHHHHHHhcC-------------CCC
Q 024256 42 RPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQN-------------LPA 107 (270)
Q Consensus 42 ~~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~-~~~~~Givt~~dl~~~~~~~~-------------~~~ 107 (270)
..+++++|++..+++++++++|+.+|++.|.+++++++||++ +|+++|+++..|++ ++.... ...
T Consensus 4 ~~~v~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~-~~~~~~~~~~~~~~~~~~~~~~ 82 (152)
T 4gqw_A 4 VYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLL-ALDSGDSTWKTFNAVQKLLSKT 82 (152)
T ss_dssp CSBGGGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHT-TCC----CCHHHHHHHTC----
T ss_pred eEEhhhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeCCCeEEEEEEHHHHH-HhhcccCcccchHHHHHHHHHh
Confidence 357999999544899999999999999999999999999999 78999999999996 321110 112
Q ss_pred CccchhhccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHHHH
Q 024256 108 DSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 168 (270)
Q Consensus 108 ~~~~v~~im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~ 168 (270)
...++.++|.++++++++++++.+|++.|.+++.+++||+|++|+++|+||.+||++++..
T Consensus 83 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Giit~~dil~~~~~ 143 (152)
T 4gqw_A 83 NGKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQ 143 (152)
T ss_dssp -CCBHHHHSEESCCCEESSSBHHHHHHHHHHSSCCEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred ccccHHHhcCCCceEECCCCcHHHHHHHHHHCCCCEEEEECCCCcEEEEEEHHHHHHHHHh
Confidence 2468999999999999999999999999999999999999988999999999999998553
No 34
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.83 E-value=1.3e-20 Score=143.64 Aligned_cols=121 Identities=17% Similarity=0.319 Sum_probs=108.4
Q ss_pred CCCccccccCCCceeEECCCCCHHHHHHHHHHCCCcEEEEEe-CCEEEEEeeHHHHHHHHHhcCCCCCccchhhccCCCC
Q 024256 42 RPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNP 120 (270)
Q Consensus 42 ~~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~im~~~~ 120 (270)
..+++++|. ++++++++++|+.+|++.|.+++.+++||++ +|+++|+++.+|++++++..+......+++++|.+++
T Consensus 7 ~~~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~~ 84 (133)
T 1y5h_A 7 MTTARDIMN--AGVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAAGLDPNTATAGELARDSI 84 (133)
T ss_dssp -CCHHHHSE--ETCCCEETTSBHHHHHHHHHHHTCSEEEEECGGGBEEEEEEHHHHHHTTGGGTCCTTTSBHHHHHTTCC
T ss_pred hcCHHHHhc--CCceEeCCCCCHHHHHHHHHHhCCCeEEEECCCCeEEEEEeHHHHHHHHHhcCCCccccCHHHHhcCCC
Confidence 458999998 5789999999999999999999999999997 8999999999999733555544434578999999999
Q ss_pred eeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHH
Q 024256 121 ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 165 (270)
Q Consensus 121 ~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~ 165 (270)
.++++++++.++++.|.+++.+++||+|+ |+++|+||..||+++
T Consensus 85 ~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-g~~~Giit~~dil~~ 128 (133)
T 1y5h_A 85 YYVDANASIQEMLNVMEEHQVRRVPVISE-HRLVGIVTEADIARH 128 (133)
T ss_dssp CCEETTCCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHT
T ss_pred EEECCCCCHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHH
Confidence 99999999999999999999999999997 999999999999985
No 35
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.83 E-value=5.1e-20 Score=145.16 Aligned_cols=123 Identities=19% Similarity=0.197 Sum_probs=108.1
Q ss_pred CCCccccccCCCceeEECCCCCHHHHHHHHHHCCCcEEEEEe-CCEEEEEeeHHHHHHHHHhc--------CCCCCccch
Q 024256 42 RPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQ--------NLPADSTLV 112 (270)
Q Consensus 42 ~~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~-~~~~~Givt~~dl~~~~~~~--------~~~~~~~~v 112 (270)
..+++++|. ++++++++++|+.+|++.|.+++++++||++ +|+++|+|+.+|++ +.+.. .......++
T Consensus 4 ~~~v~dim~--~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~-~~~~~~~~~~~~~~~~~~~~~v 80 (160)
T 2o16_A 4 MIKVEDMMT--RHPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLL-AAQESSLQRSAQGDSLAFETPL 80 (160)
T ss_dssp CCBGGGTSE--ESCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHH-HHHHHHCC---------CCCBH
T ss_pred cCcHHHHhc--CCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHH-HHHHHhhcccccccchhcccCH
Confidence 457999998 6789999999999999999999999999999 79999999999998 55432 111235789
Q ss_pred hhccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHHHH
Q 024256 113 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 168 (270)
Q Consensus 113 ~~im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~ 168 (270)
.++|.++++++++++++.+|++.|.+++.+.+||+|+ |+++|+||..||++++..
T Consensus 81 ~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~lvGiit~~dil~~~~~ 135 (160)
T 2o16_A 81 FEVMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVAK-DVLVGIITDSDFVTIAIN 135 (160)
T ss_dssp HHHSCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEET-TEEEEEECHHHHHHHHHH
T ss_pred HHHhcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEEC-CEEEEEEEHHHHHHHHHH
Confidence 9999999999999999999999999999999999997 999999999999987543
No 36
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.83 E-value=1.8e-20 Score=148.50 Aligned_cols=126 Identities=21% Similarity=0.351 Sum_probs=111.4
Q ss_pred hhCCCCccccccCC-CceeEECCCCCHHHHHHHHHHCCCcEEEEEe-CCEEEEEeeHHHHHHHHHhcC-CCCCccchhhc
Q 024256 39 RMFRPSLSTIIPEK-SKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQN-LPADSTLVEKV 115 (270)
Q Consensus 39 ~~~~~~v~~im~~~-~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~-~~~~~Givt~~dl~~~~~~~~-~~~~~~~v~~i 115 (270)
.+...+|+++|.++ .+++++++++|+.+|++.|.+++++++||++ +|+++|+||.+|++ +.+... ......+++++
T Consensus 20 ~l~~~~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~-~~~~~~~~~~~~~~v~~~ 98 (165)
T 3fhm_A 20 QGMATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLV-KAVAGQGAASLQQSVSVA 98 (165)
T ss_dssp SSSSCBHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHH-HHHHHHGGGGGTSBGGGT
T ss_pred hhhhcCHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEHHHHH-HHHHhcCCccccCCHHHH
Confidence 45667899999952 3689999999999999999999999999999 89999999999998 544432 12335789999
Q ss_pred cCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHH
Q 024256 116 MTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAA 166 (270)
Q Consensus 116 m~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~ 166 (270)
|.++++++++++++.++++.|.+++.+++||+|+ |+++|+||..||++++
T Consensus 99 m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~~~Giit~~dil~~~ 148 (165)
T 3fhm_A 99 MTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEEN-GRLAGIISIGDVVKAR 148 (165)
T ss_dssp SBSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHT
T ss_pred hcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHH
Confidence 9999999999999999999999999999999998 9999999999999974
No 37
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.83 E-value=5.5e-20 Score=144.04 Aligned_cols=129 Identities=16% Similarity=0.198 Sum_probs=110.1
Q ss_pred hhCCCCccccccCCCceeEECCCCCHHHHHHHHHHCCCcEEEEEe-CCEEEEEeeHHHHHHHHHhcCC-----CCCccch
Q 024256 39 RMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNL-----PADSTLV 112 (270)
Q Consensus 39 ~~~~~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~-~~~~~Givt~~dl~~~~~~~~~-----~~~~~~v 112 (270)
.+...+++++|.+.++++++++++|+.+|++.|.+++++++||++ +|+++|+++..|++ +.+.... .....++
T Consensus 7 ~l~~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~-~~~~~~~~~~~~~~~~~~v 85 (157)
T 2emq_A 7 EFMQMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLISMTMMM-DAILGLERIEFERLETMKV 85 (157)
T ss_dssp ---CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTTCCEEEEEEHHHHH-HHSBCSSSBCGGGGGTCBG
T ss_pred hHhhCcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCCCCEEEEeeHHHHH-HHHhcccccchHHhcCCcH
Confidence 345778999999433799999999999999999999999999999 79999999999997 5554321 1135689
Q ss_pred hhccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHHHHHh
Q 024256 113 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 170 (270)
Q Consensus 113 ~~im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~~~ 170 (270)
.++|.+++.++++++++.+|++.|.++++ +||+|++|+++|+||..||++++....
T Consensus 86 ~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~~g~~~Giit~~dil~~~~~~~ 141 (157)
T 2emq_A 86 EEVMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVENDDGYFAGIFTRREVLKQLNKQL 141 (157)
T ss_dssp GGTCBCCCCEEETTSBHHHHHHHHHHSSE--EEEECSSSSEEEEEEHHHHHHHHHHTT
T ss_pred HHHhCCCCceecCCCcHHHHHHHHhhCCE--EEEEcCCCeEEEEEEHHHHHHHHHHHh
Confidence 99999999999999999999999999886 999998899999999999999866544
No 38
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.83 E-value=1.5e-19 Score=141.86 Aligned_cols=122 Identities=22% Similarity=0.343 Sum_probs=107.2
Q ss_pred CCccccccCCCceeEECCCCCHHHHHHHHHHCCCcE-EEEEeCCEEEEEeeHHHHHHHHHhc---------------CCC
Q 024256 43 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSS-AVVTVENKPRGILTSKDILMRVISQ---------------NLP 106 (270)
Q Consensus 43 ~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~-i~Vv~~~~~~Givt~~dl~~~~~~~---------------~~~ 106 (270)
.+++++|+ ++++++++++|+.+|++.|.++++++ +||+++++++|++|..|++ +.+.. ...
T Consensus 16 ~~v~~im~--~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~~~vGivt~~dl~-~~~~~~~~~~~~~~~~~~~~~~~ 92 (157)
T 1o50_A 16 KDVCKLIS--LKPTVVEEDTPIEEIVDRILEDPVTRTVYVARDNKLVGMIPVMHLL-KVSGFHFFGFIPKEELIRSSMKR 92 (157)
T ss_dssp HHHTTSSC--CCCEEECTTCBHHHHHHHHHHSTTCCEEEEEETTEEEEEEEHHHHH-HHHHHHHHCCCC-------CCCC
T ss_pred ccHhhccc--CCCceECCCCCHHHHHHHHHhCCCCccEEEEECCEEEEEEEHHHHH-HHHhhhHHhhhccHHHHHHHHHH
Confidence 36899999 68999999999999999999999999 9999944999999999998 54321 112
Q ss_pred CCccchhhccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHHHH
Q 024256 107 ADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 168 (270)
Q Consensus 107 ~~~~~v~~im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~ 168 (270)
....+++++|.+ ++++++++++.+|++.|.+++.+++||+|++|+++|+||..||++++..
T Consensus 93 ~~~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dll~~l~~ 153 (157)
T 1o50_A 93 LIAKNASEIMLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVDEKGEIVGDLNSLEILLALWK 153 (157)
T ss_dssp CSSCBHHHHCBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHH
T ss_pred HcCCcHHHHcCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEcCCCEEEEEEEHHHHHHHHHH
Confidence 235789999999 9999999999999999999999999999988999999999999987543
No 39
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.82 E-value=7.2e-20 Score=143.94 Aligned_cols=130 Identities=14% Similarity=0.188 Sum_probs=111.4
Q ss_pred HhhCCCCccccccCCCceeEECCCCCHHHHHHHHHHCCCcEEEEEe-CCEEEEEeeHHHHHHHHHhcCCC-----CCccc
Q 024256 38 ERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLP-----ADSTL 111 (270)
Q Consensus 38 ~~~~~~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~-~~~~~Givt~~dl~~~~~~~~~~-----~~~~~ 111 (270)
+.+...+++++|.++.+++++++++|+.+|++.|.+++++++||++ +|+++|+|+..|++ +.+..... ....+
T Consensus 9 ~~l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~-~~~~~~~~~~~~~~~~~~ 87 (159)
T 1yav_A 9 DQLLEATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIM-NSIFGLERIEFEKLDQIT 87 (159)
T ss_dssp --CTTCBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEHHHHH-HHHBCSSSBCGGGTTTSB
T ss_pred HHHhHhhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEeEHHHHH-HHhhhhcccchhhhccCC
Confidence 3456778999999433899999999999999999999999999999 78999999999997 66644221 23578
Q ss_pred hhhccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHHHHHh
Q 024256 112 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 170 (270)
Q Consensus 112 v~~im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~~~ 170 (270)
+.++|.+++.++++++++.+|++.|.++++ +||+|++|+++|+||..||++++...+
T Consensus 88 v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~~g~~vGiit~~dil~~~~~~~ 144 (159)
T 1yav_A 88 VEEVMLTDIPRLHINDPIMKGFGMVINNGF--VCVENDEQVFEGIFTRRVVLKELNKHI 144 (159)
T ss_dssp HHHHSBCSCCEEETTSBHHHHHHHTTTCSE--EEEECTTCBEEEEEEHHHHHHHHHHHC
T ss_pred HHHhcCCCCceEcCCCCHHHHHHHHHhCCE--EEEEeCCCeEEEEEEHHHHHHHHHHHH
Confidence 999999999999999999999999998876 999998899999999999999865543
No 40
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.82 E-value=2.3e-20 Score=149.34 Aligned_cols=127 Identities=22% Similarity=0.347 Sum_probs=109.3
Q ss_pred CCccccccCCCceeEECCCCCHHHHHHHHHHCCCcEEEEEe-CCEEEEEeeHHHHHHHHHh-cC----------------
Q 024256 43 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVIS-QN---------------- 104 (270)
Q Consensus 43 ~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~-~~~~~Givt~~dl~~~~~~-~~---------------- 104 (270)
.+++++|.+..+++++++++|+.+|+++|.+++++++||++ +|+++|+|+.+|++ ++.. .+
T Consensus 4 ~~v~dim~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~-~~~~~~~~~~~~~~~~~~~~~~~ 82 (180)
T 3sl7_A 4 YTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLL-ALDSISGRSQNDTNLFPDVDSTW 82 (180)
T ss_dssp CBHHHHSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHT-CC-------------------CC
T ss_pred eeHHHhcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECCCCeEEEEEEHHHHH-hhhhhccccCCcccccccccchh
Confidence 47899999533899999999999999999999999999999 89999999999996 3211 00
Q ss_pred ----------CCCCccchhhccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHHHHHh
Q 024256 105 ----------LPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 170 (270)
Q Consensus 105 ----------~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~~~ 170 (270)
......+++++|+++++++++++++.+|+++|.+++++++||+|++|+++|+||.+||++++....
T Consensus 83 ~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~~~~~~ 158 (180)
T 3sl7_A 83 KTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAALQIK 158 (180)
T ss_dssp CSHHHHHHHHHTTTTCBHHHHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEEEEEEHHHHHHHHHHHH
T ss_pred hhhHHHHHHHhccccccHHHHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHHHh
Confidence 012246899999999999999999999999999999999999998999999999999999866543
No 41
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.82 E-value=4.7e-19 Score=145.47 Aligned_cols=128 Identities=16% Similarity=0.233 Sum_probs=112.3
Q ss_pred HHHHHHHHhhCCCCccccccCCCceeEECCCCCHHHHHHHHHHC---CCcEEEEEe-CCEEEEEeeHHHHHHHHHhcCCC
Q 024256 31 TFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLEL---RLSSAVVTV-ENKPRGILTSKDILMRVISQNLP 106 (270)
Q Consensus 31 ~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~---~~~~i~Vv~-~~~~~Givt~~dl~~~~~~~~~~ 106 (270)
..+.++.. +...+++++|+ ++++++++++|+.+|++.|.++ +++++||++ +|+++|+|+.+|++ . .
T Consensus 43 ~~i~~~l~-~~~~~v~~iM~--~~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll-~-----~- 112 (205)
T 3kxr_A 43 QRFELYDQ-YSENEIGRYTD--HQMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEADKYLGTVRRYDIF-K-----H- 112 (205)
T ss_dssp HHHHHHHH-SCTTCGGGGCB--CCCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTTCBEEEEEEHHHHT-T-----S-
T ss_pred HHHHHHhC-CCcchHHhhcc--CceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCCCeEEEEEEHHHHH-h-----C-
Confidence 44444443 35678999999 6899999999999999999997 789999999 89999999999996 2 1
Q ss_pred CCccchhhccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHHHH
Q 024256 107 ADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 168 (270)
Q Consensus 107 ~~~~~v~~im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~ 168 (270)
....+++++|+++++++++++++.++++.|.++++..+||+|++|+++|+||..|+++.+..
T Consensus 113 ~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~g~lvGiIT~~Dil~~i~~ 174 (205)
T 3kxr_A 113 EPHEPLISLLSEDSRALTANTTLLDAAEAIEHSREIELPVIDDAGELIGRVTLRAATALVRE 174 (205)
T ss_dssp CTTSBGGGGCCSSCCCEETTSCHHHHHHHHHTSSCSEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred CCcchHHHHhcCCCeEECCCCCHHHHHHHHHhcCCCEEEEEcCCCeEEEEEEHHHHHHHHHH
Confidence 23578999999999999999999999999999999999999999999999999999997543
No 42
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.82 E-value=5.3e-20 Score=170.10 Aligned_cols=151 Identities=27% Similarity=0.322 Sum_probs=131.1
Q ss_pred ChhhhhhhHHHHHHHhhhHHhhCCCCCChhHHHH----HHHHhhCCCCccccccCCCceeEECCCCCHHHHHHHHHHCCC
Q 024256 1 MERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIE----TLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRL 76 (270)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~ 76 (270)
|+.+++.+++++++++| |++++|.+..++ .+.+.+ +..+.|. ++++++++++|+.+++++|.++++
T Consensus 75 MdtvTe~~lAia~a~~G-----giGvIh~~~~~~~q~~~V~~V~---~~~~~m~--~d~v~l~~~~tv~ea~~~m~~~~~ 144 (511)
T 3usb_A 75 MDTVTEADMAIAMARQG-----GLGIIHKNMSIEQQAEQVDKVK---RSESGVI--SDPFFLTPEHQVYDAEHLMGKYRI 144 (511)
T ss_dssp CTTTCSHHHHHHHHHHT-----CEEEECSSSCHHHHHHHHHHHH---TSSSCSS--SSCCCBCTTSBHHHHHHHHHHHCC
T ss_pred chhhcHHHHHHHHHhcC-----CceeecccCCHHHHHHHHHHhh---ccccccc--cCCEEECCCCCHHHHHHHHHHcCC
Confidence 78899999999999999 999998762222 233333 4567888 689999999999999999999999
Q ss_pred cEEEEEe---CCEEEEEeeHHHHHHHHHhcCCCCCccchhhccCC-CCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCc
Q 024256 77 SSAVVTV---ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTP-NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGD 152 (270)
Q Consensus 77 ~~i~Vv~---~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~im~~-~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~ 152 (270)
+++||++ +++++|+||.+|+. . ......+++++|++ +++++++++++.+++++|.+++.+.+||+|++|+
T Consensus 145 s~~pVvd~g~~~~lvGiVt~rDl~-~-----~~~~~~~V~~vM~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~ 218 (511)
T 3usb_A 145 SGVPVVNNLDERKLVGIITNRDMR-F-----IQDYSIKISDVMTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGV 218 (511)
T ss_dssp SEEEEESCTTTCBEEEEEEHHHHT-T-----CCCSSSBHHHHCCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEECTTSB
T ss_pred cEEEEEecCCCCEEEEEEEehHhh-h-----hccCCCcHHHhcccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCCCC
Confidence 9999998 57999999999995 2 22335789999998 9999999999999999999999999999999999
Q ss_pred EEEEEeHHHHHHHHH
Q 024256 153 VVDVVDVIHITHAAV 167 (270)
Q Consensus 153 ~~Givt~~dll~~~~ 167 (270)
++|+||.+|+++...
T Consensus 219 l~GiIT~~Dil~~~~ 233 (511)
T 3usb_A 219 LQGLITIKDIEKVIE 233 (511)
T ss_dssp EEEEEEHHHHHHHHH
T ss_pred EeeeccHHHHHHhhh
Confidence 999999999999753
No 43
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.82 E-value=1.6e-19 Score=139.10 Aligned_cols=124 Identities=15% Similarity=0.181 Sum_probs=106.5
Q ss_pred CCCCccc---cccCCCceeEECCCCCHHHHHHHHHHCCCcEEEEEe-CCEEEEEeeHHHHHHHHHhcCC-CCCccchhhc
Q 024256 41 FRPSLST---IIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNL-PADSTLVEKV 115 (270)
Q Consensus 41 ~~~~v~~---im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~-~~~~~Givt~~dl~~~~~~~~~-~~~~~~v~~i 115 (270)
...++++ +|. ++++++++++|+.+|++.|.+++++++||++ +|+++|+++..|++ +.+..+. .....++.++
T Consensus 6 ~~~~v~~~~~~~~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~-~~~~~~~~~~~~~~v~~~ 82 (144)
T 2nyc_A 6 LKIPIGDLNIITQ--DNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVL-GLIKGGIYNDLSLSVGEA 82 (144)
T ss_dssp GGSBGGGSSCCBC--SSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHH-HHHHTC----CCSBHHHH
T ss_pred hhcchhhcCCCCC--CCceEECCCCcHHHHHHHHHHcCcceeeEEcCCCcEEEEEcHHHHH-HHhcccccccCCccHHHH
Confidence 3556788 887 6899999999999999999999999999999 89999999999998 6555432 1235689999
Q ss_pred cCC------CCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHHH
Q 024256 116 MTP------NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 167 (270)
Q Consensus 116 m~~------~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~~ 167 (270)
|.+ ++.++++++++.++++.|.+++.+++||+|++|+++|+||..||++++.
T Consensus 83 m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~ 140 (144)
T 2nyc_A 83 LMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYIL 140 (144)
T ss_dssp HHHCC------CEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred HhcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHHHH
Confidence 976 6889999999999999999999999999998899999999999998754
No 44
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.81 E-value=1.6e-19 Score=145.48 Aligned_cols=122 Identities=23% Similarity=0.260 Sum_probs=109.5
Q ss_pred CCCCccccccCCCceeEECCCCCHHHHHHHHHHCCCcEEEEEe-CCEEEEEeeHHHHHHHHHhc-CCCCCccchhhccCC
Q 024256 41 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQ-NLPADSTLVEKVMTP 118 (270)
Q Consensus 41 ~~~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~-~~~~~Givt~~dl~~~~~~~-~~~~~~~~v~~im~~ 118 (270)
...+++++|+ ++++++++++|+.+|+++|.+++++++||++ +|+++|+++.+|++ +.+.. .......+++++|.+
T Consensus 7 ~~~~v~~im~--~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~g~~vGivt~~dl~-~~~~~~~~~~~~~~v~~im~~ 83 (184)
T 1pvm_A 7 MFMRVEKIMN--SNFKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSII-KRFIPRNKKPDEVPIRLVMRK 83 (184)
T ss_dssp CCCBGGGTSB--TTCCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHH-HHTGGGCCCGGGSBGGGTSBS
T ss_pred cccCHHHhcC--CCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHH-HHHhhcccCcccCCHHHHhCC
Confidence 3468999999 6899999999999999999999999999998 79999999999998 55442 223345789999999
Q ss_pred CCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHH
Q 024256 119 NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 165 (270)
Q Consensus 119 ~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~ 165 (270)
+++++++++++.+|++.|.+++.+++||+|++|+++|+||..||+++
T Consensus 84 ~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Givt~~dll~~ 130 (184)
T 1pvm_A 84 PIPKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTLTDLSRY 130 (184)
T ss_dssp SCCEEETTCBHHHHHHHHHHHTCSEEEEECTTCCEEEEEEHHHHTTT
T ss_pred CCcEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHH
Confidence 99999999999999999999999999999988999999999999985
No 45
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.81 E-value=6.4e-21 Score=175.66 Aligned_cols=152 Identities=21% Similarity=0.225 Sum_probs=117.5
Q ss_pred ChhhhhhhHHHHHHHhhhHHhhCCCCCChhHHHHHHHHhh-CCCCccccccCCCceeEECCCCCHHHHHHHHHHCCCcEE
Q 024256 1 MERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETLRERM-FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSA 79 (270)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i 79 (270)
|+++++.++++++++.| |+|++|.+...+...+.+ .-.++.++|. ++++++++++|+.+++++|.+++++++
T Consensus 51 MdtVTe~~ma~a~a~~G-----GiGvI~~n~s~e~qa~~V~~Vk~~~~~m~--~d~v~v~~~~tv~ea~~~m~~~~~s~~ 123 (496)
T 4fxs_A 51 MDTVTEARLAIALAQEG-----GIGFIHKNMSIEQQAAQVHQVKIFEAGVV--THPVTVRPEQTIADVMELTHYHGFAGF 123 (496)
T ss_dssp CTTTCSHHHHHHHHHHT-----CEEEECSSSCHHHHHHHHHHHHHCCC--C--BCCCCBCSSSBHHHHHHHHTSSCCCEE
T ss_pred cchhhHHHHHHHHHHcC-----CcceecCCCCHHHHHHHHHhccccccccc--cCceEECCCCCHHHHHHHHHHcCCcEE
Confidence 88899999999999999 999998763333322211 1135678898 789999999999999999999999999
Q ss_pred EEEe-CCEEEEEeeHHHHHHHHHhcCCCCCccchhhccCC--CCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEE
Q 024256 80 VVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTP--NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDV 156 (270)
Q Consensus 80 ~Vv~-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Gi 156 (270)
||++ +++++|+||.+|+. .......+++++|++ +++++++++++.+++++|.+++++.+||+|++|+++|+
T Consensus 124 PVvd~~~~lvGiVt~rDL~------~~~~~~~~v~diM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~Gi 197 (496)
T 4fxs_A 124 PVVTENNELVGIITGRDVR------FVTDLTKSVAAVMTPKERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGM 197 (496)
T ss_dssp EEECSSSBEEEEEEHHHHT------TCCCTTSBGGGTSEEGGGCCEEECC----CGGGTCC---CCCEEEECTTSBCCEE
T ss_pred EEEccCCEEEEEEEHHHHh------hcccCCCcHHHHhcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEe
Confidence 9999 89999999999994 122335789999984 58999999999999999999999999999999999999
Q ss_pred EeHHHHHHH
Q 024256 157 VDVIHITHA 165 (270)
Q Consensus 157 vt~~dll~~ 165 (270)
||.+|+++.
T Consensus 198 IT~~DIl~~ 206 (496)
T 4fxs_A 198 ITAKDFHKA 206 (496)
T ss_dssp ECCC-----
T ss_pred ehHhHHHHh
Confidence 999999986
No 46
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.81 E-value=2.6e-19 Score=143.93 Aligned_cols=131 Identities=13% Similarity=0.166 Sum_probs=110.8
Q ss_pred HhhCCCCccccccCCCc--eeEE--CCCCCHHHHHHHHHHCCCcEEEEE--e-CCEEEEEeeHHHHHHHHHhcC------
Q 024256 38 ERMFRPSLSTIIPEKSK--VVTI--SPTDTVLMATKKMLELRLSSAVVT--V-ENKPRGILTSKDILMRVISQN------ 104 (270)
Q Consensus 38 ~~~~~~~v~~im~~~~~--~~~v--~~~~tv~~a~~~m~~~~~~~i~Vv--~-~~~~~Givt~~dl~~~~~~~~------ 104 (270)
+.+...+++++|++..+ ++++ ++++|+.+|++.|.+++++++||+ + +|+++|+|+..|++ +.+...
T Consensus 6 ~~~~~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~-~~~~~~~~~~~~ 84 (185)
T 2j9l_A 6 EFAHKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLI-ISIENARKKQDG 84 (185)
T ss_dssp ---CCCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHH-HHHHHHHTSCSC
T ss_pred hhhccCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHH-HHHHhhcccCCC
Confidence 45567899999995322 7788 999999999999999999999999 6 89999999999998 554321
Q ss_pred ------------------CCCCccchhhccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHH
Q 024256 105 ------------------LPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAA 166 (270)
Q Consensus 105 ------------------~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~ 166 (270)
......+++++|.++++++++++++.+|++.|.+++.+++||+| +|+++|+||..||++++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~g~~vGiit~~dll~~l 163 (185)
T 2j9l_A 85 VVSTSIIYFTEHSPPLPPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTH-NGRLLGIITKKDVLKHI 163 (185)
T ss_dssp CCTTCEEECSSSCCCCCTTCCCCEECGGGEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHH
T ss_pred ccccceeecccCCcccccccccCccHHHhhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEE-CCEEEEEEEHHHHHHHH
Confidence 11235789999999999999999999999999999999999999 89999999999999986
Q ss_pred HHHh
Q 024256 167 VATV 170 (270)
Q Consensus 167 ~~~~ 170 (270)
....
T Consensus 164 ~~~~ 167 (185)
T 2j9l_A 164 AQMA 167 (185)
T ss_dssp HHHC
T ss_pred HHhh
Confidence 5543
No 47
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.80 E-value=1.2e-18 Score=137.27 Aligned_cols=126 Identities=10% Similarity=0.159 Sum_probs=108.7
Q ss_pred CCCCccccccCCCceeEECCCCCHHHHHHHHHHCCCcEEEEEe---CCEEEEEeeHHHHHHHHHhcCCC----CCccchh
Q 024256 41 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV---ENKPRGILTSKDILMRVISQNLP----ADSTLVE 113 (270)
Q Consensus 41 ~~~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~---~~~~~Givt~~dl~~~~~~~~~~----~~~~~v~ 113 (270)
...+++++|. ++++++++++|+.+|++.|.+++++++||++ +|+++|+||..|++ +.+..+.. ....++.
T Consensus 11 ~~~~v~dim~--~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~-~~~~~~~~~~~~~~~~~v~ 87 (164)
T 2pfi_A 11 HHVRVEHFMN--HSITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLV-QALQAEPPSRAPGHQQCLQ 87 (164)
T ss_dssp CSCBHHHHCB--CCCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHH-HHHHC-------CCCCBHH
T ss_pred cCCCHHHHcC--CCCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHH-HHHHhhccccCCcccchhh
Confidence 4568999999 6899999999999999999999999999998 48999999999998 65543321 1235799
Q ss_pred hccCCC------CeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHHHHHh
Q 024256 114 KVMTPN------PECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 170 (270)
Q Consensus 114 ~im~~~------~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~~~ 170 (270)
++|.++ ++++++++++.+|++.|.+++.+++||+| +|+++|+||..||++++....
T Consensus 88 ~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~l~Giit~~dil~~~~~~~ 149 (164)
T 2pfi_A 88 DILARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS-RGRAVGCVSWVEMKKAISNLT 149 (164)
T ss_dssp HHHHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHHHHHH
T ss_pred hhhcccccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEHHHHHHHHHhhh
Confidence 999876 78999999999999999999999999999 799999999999999855443
No 48
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.79 E-value=1.3e-18 Score=135.77 Aligned_cols=119 Identities=16% Similarity=0.207 Sum_probs=104.5
Q ss_pred CCccccccCCCceeEECCCCCHHHHHHHHHHCCCcEEEEEe-CCEEEEEeeHHHHHHHHHhcCC-CCCccchhhccC---
Q 024256 43 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNL-PADSTLVEKVMT--- 117 (270)
Q Consensus 43 ~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~-~~~~~Givt~~dl~~~~~~~~~-~~~~~~v~~im~--- 117 (270)
.+++++ . +++++++++|+.+|++.|.+++++++||++ +|+++|+++..|++ +....+. .....++.++|.
T Consensus 23 ~~v~~~-~---~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~vGivt~~dl~-~~~~~~~~~~~~~~v~~~m~~~~ 97 (152)
T 2uv4_A 23 LQIGTY-A---NIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVI-NLAAEKTYNNLDVSVTKALQHRS 97 (152)
T ss_dssp HTCSBC-S---SCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEHHHHH-HHHHCSSCCCTTSBGGGGGGTCC
T ss_pred ccCCcc-C---CceEeCCCCcHHHHHHHHHHcCCceEeEECCCCcEEEEEeHHHHH-HHhcchhhhhhcchHHHHHhhhh
Confidence 367777 3 588999999999999999999999999999 89999999999998 6555432 223468999997
Q ss_pred ---CCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHH
Q 024256 118 ---PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAA 166 (270)
Q Consensus 118 ---~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~ 166 (270)
+++.++++++++.++++.|.+++.+++||+|++|+++|+||..||++++
T Consensus 98 ~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~l 149 (152)
T 2uv4_A 98 HYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQAL 149 (152)
T ss_dssp HHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHH
T ss_pred cccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECCCCeEEEEEEHHHHHHHH
Confidence 6889999999999999999999999999999889999999999999863
No 49
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.79 E-value=6.1e-19 Score=148.48 Aligned_cols=122 Identities=22% Similarity=0.307 Sum_probs=103.7
Q ss_pred CCCCccccccCCCceeEECCCCCHHHHHHHHHHCCCcEEEEEe-CCEEEEEeeHHHHHHHHHhcCCC-------------
Q 024256 41 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLP------------- 106 (270)
Q Consensus 41 ~~~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~-~~~~~Givt~~dl~~~~~~~~~~------------- 106 (270)
...+|+++|+ ++++++++++++.+|+++|.+++++++||+| +|+++|++|..|++ +.+.....
T Consensus 5 ~~~~v~~im~--~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~l~Giit~~di~-~~~~~~~~~~~~~~~~~~~~~ 81 (245)
T 3l2b_A 5 VKLKVEDLEM--DKIAPLAPEVSLKMAWNIMRDKNLKSIPVADGNNHLLGMLSTSNIT-ATYMDIWDSNILAKSATSLDN 81 (245)
T ss_dssp CCCBGGGSCC--BCCCCBCTTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHH-HHHHCCCCTTHHHHTTCCHHH
T ss_pred ccCcHHHhcC--CCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHH-HHHHHhhhhhhhhhccCCHHH
Confidence 3678999999 6799999999999999999999999999999 79999999999998 55432210
Q ss_pred --------------------------------------------------------------------------------
Q 024256 107 -------------------------------------------------------------------------------- 106 (270)
Q Consensus 107 -------------------------------------------------------------------------------- 106 (270)
T Consensus 82 v~~~l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~~~ivIvgdr~~~~~~~i~~~~~~liit~~~~~~~~v~~~a~ 161 (245)
T 3l2b_A 82 ILDTLSAEAQNINEERKVFPGKVVVAAMQAESLKEFISEGDIAIAGDRAEIQAELIELKVSLLIVTGGHTPSKEIIELAK 161 (245)
T ss_dssp HHHHTTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCTTCEEEECSCHHHHHHHHHTTCSEEEECTTCCCCHHHHHHHH
T ss_pred HHHHhCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCCCCEEEECCCHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHH
Confidence
Q ss_pred --------------------CCccchhhccC-CCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHH
Q 024256 107 --------------------ADSTLVEKVMT-PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 165 (270)
Q Consensus 107 --------------------~~~~~v~~im~-~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~ 165 (270)
....+++++|+ +++.++++++++.+|+++|.+++++++||+|++|+++|+||.+|++++
T Consensus 162 ~~~~~~i~t~~d~~~~~~~~~~~~~v~~im~~~~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dll~~ 241 (245)
T 3l2b_A 162 KNNITVITTPHDSFTASRLIVQSLPVDYVMTKDNLVAVSTDDLVEDVKVTMSETRYSNYPVIDENNKVVGSIARFHLIST 241 (245)
T ss_dssp HHTCEEEECSSCHHHHHHHGGGGSBHHHHSBCTTCCCEETTSBHHHHHHHHHHHCCSEEEEECTTCBEEEEEECC-----
T ss_pred HcCCeEEEeCCChHHHHHHHhcCCceeeEecCCccEEECCCCcHHHHHHHHHhcCCceEEEEcCCCeEEEEEEHHHhhch
Confidence 01346889999 899999999999999999999999999999989999999999999975
No 50
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.78 E-value=2.2e-18 Score=147.10 Aligned_cols=166 Identities=16% Similarity=0.232 Sum_probs=136.4
Q ss_pred CCCccccccCCCceeEECCCCCHHHHHHHHHHCCCcEEEEEe-CCEEEEEeeHHHHHHHHHhcCCCCCccchhhccCCCC
Q 024256 42 RPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNP 120 (270)
Q Consensus 42 ~~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~im~~~~ 120 (270)
..+++++|+ ++++++++++++.+|++.|.+++++++||++ +|+++|++|..|++ +.+...... ..+++++|++++
T Consensus 83 ~~~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~-~~~~~~~~~-~~~v~~~m~~~~ 158 (280)
T 3kh5_A 83 NEPVREIME--ENVITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLITERDVI-RALLDKIDE-NEVIDDYITRDV 158 (280)
T ss_dssp TSBGGGTSB--CSCCCEETTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHH-HHHGGGSCT-TCBSGGGCBCSC
T ss_pred hhhHHHhcC--CCCEEECCCCCHHHHHHHHHhCCCCEEEEEcCCCEEEEEEEHHHHH-HHHhhcCCC-CCCHHHHhCCCC
Confidence 568999999 6899999999999999999999999999998 89999999999998 666554433 358999999999
Q ss_pred eeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHHHH---------------------HhC-------C
Q 024256 121 ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA---------------------TVG-------N 172 (270)
Q Consensus 121 ~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~---------------------~~~-------~ 172 (270)
.++++++++.++++.|.+++.+.+||+ ++|+++|+||.+|+++.... .+. .
T Consensus 159 ~~v~~~~~l~~~~~~~~~~~~~~~~Vv-~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~ 237 (280)
T 3kh5_A 159 IVATPGERLKDVARTMVRNGFRRLPVV-SEGRLVGIITSTDFIKLLGSDWAFNHMQTGNVREITNVRMEEIMKRDVITAK 237 (280)
T ss_dssp CCBCTTCBHHHHHHHHHHHTCSEEEEE-ETTEEEEEEEHHHHHHHHTSHHHHHHHHSCCTHHHHHCBHHHHSBSSCCCBC
T ss_pred eEECCCCcHHHHHHHHHHcCCCEEEEE-ECCEEEEEEEHHHHHHHHhhhhhhhhhcccchhhhhCCcHHHHhcCCCEEEC
Confidence 999999999999999999999999999 58999999999999987521 110 1
Q ss_pred CCCChHHHHHHHHHHHHHHhhccCCCCC--CCcccccccccc
Q 024256 173 TAGSNNEAASTMMQKFWDSAMALSPNDD--EEDNRSEGSLKF 212 (270)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~t~~di~~~~ 212 (270)
...++.+++..|.......++++.+.+. +.+|..|+++.+
T Consensus 238 ~~~~l~~a~~~m~~~~~~~l~Vvd~~g~~~Givt~~dil~~l 279 (280)
T 3kh5_A 238 EGDKLKKIAEIMVTNDIGALPVVDENLRIKGIITEKDVLKYF 279 (280)
T ss_dssp TTCBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHGGGG
T ss_pred CCCCHHHHHHHHHHCCCCEEEEECCCCeEEEEEeHHHHHHhh
Confidence 3345567777777777777777765433 238888887765
No 51
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.78 E-value=1.1e-20 Score=174.04 Aligned_cols=152 Identities=26% Similarity=0.281 Sum_probs=29.3
Q ss_pred ChhhhhhhHHHHHHHhhhHHhhCCCCCChhHHHHHHHHhh-CCCCccccccCCCceeEECCCCCHHHHHHHHHHCCCcEE
Q 024256 1 MERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETLRERM-FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSA 79 (270)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i 79 (270)
|+.+++.++++++++.| |+|++|.+...+...+.. .-.+++++|. ++++++++++|+.+++++|.+++++++
T Consensus 50 M~tVTe~~lA~ala~~G-----GiGvI~~~~~~e~~a~~v~~vk~~~~~m~--~~~v~v~~~~tv~ea~~~m~~~~~s~~ 122 (490)
T 4avf_A 50 MDTVTEARLAIAMAQEG-----GIGIIHKNMGIEQQAAEVRKVKKHETAIV--RDPVTVTPSTKIIELLQMAREYGFSGF 122 (490)
T ss_dssp CTTTCSHHHHHHHHHHT-----SEEEECCSSCHHHHHHHHHHHHHCCC--------------------------------
T ss_pred hhhhCHHHHHHHHHHcC-----CCccccCCCCHHHHHHHhhhhcccccCcc--cCceEeCCCCcHHHHHHHHHHhCCCEE
Confidence 78899999999999999 999888653333322211 1235788999 689999999999999999999999999
Q ss_pred EEEeCCEEEEEeeHHHHHHHHHhcCCCCCccchhhccCC--CCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEE
Q 024256 80 VVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTP--NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVV 157 (270)
Q Consensus 80 ~Vv~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Giv 157 (270)
||+++++++|+||.+|+. .. .....+++++|++ +++++++++++.+++++|.+++++.+||+|++|+++|+|
T Consensus 123 pVvd~g~lvGIVt~rDl~-~~-----~~~~~~V~~vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiI 196 (490)
T 4avf_A 123 PVVEQGELVGIVTGRDLR-VK-----PNAGDTVAAIMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDENFYLRGLV 196 (490)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEECCEEEEEEEhHHhh-hc-----cccCCcHHHHhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEE
Confidence 999999999999999994 21 1235789999994 689999999999999999999999999999999999999
Q ss_pred eHHHHHHH
Q 024256 158 DVIHITHA 165 (270)
Q Consensus 158 t~~dll~~ 165 (270)
|.+|+++.
T Consensus 197 T~~Dil~~ 204 (490)
T 4avf_A 197 TFRDIEKA 204 (490)
T ss_dssp --------
T ss_pred ehHHhhhh
Confidence 99999986
No 52
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.78 E-value=1.6e-18 Score=151.34 Aligned_cols=141 Identities=13% Similarity=0.163 Sum_probs=119.4
Q ss_pred CCCChhHHHHHHHH-----hhCCCCcccc---ccCCCceeEECCCCCHHHHHHHHHHCCCcEEEEEe-CCEEEEEeeHHH
Q 024256 25 SISGPNTFIETLRE-----RMFRPSLSTI---IPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKD 95 (270)
Q Consensus 25 ~~~~~~~~~~~~~~-----~~~~~~v~~i---m~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~-~~~~~Givt~~d 95 (270)
|..+..+.+..+.. .....+++++ |. ++++++++++++.+|++.|.+++++++||++ +|+++|++|.+|
T Consensus 164 Givt~~di~~~l~~~~~~~~~~~~~v~~~~~~m~--~~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~d 241 (323)
T 3t4n_C 164 SVLTQYRILKFVALNCRETHFLKIPIGDLNIITQ--DNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYD 241 (323)
T ss_dssp EEEEHHHHHHHHHHHCGGGGGCCSBGGGTTCSBC--TTCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETTH
T ss_pred EEecHHHHHHHHHhcCCchhhhhCcHHHcCCCCC--CCcEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHH
Confidence 44555566655542 2345689999 87 6899999999999999999999999999999 799999999999
Q ss_pred HHHHHHhcCC-CCCccchhhccCC------CCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHHHH
Q 024256 96 ILMRVISQNL-PADSTLVEKVMTP------NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 168 (270)
Q Consensus 96 l~~~~~~~~~-~~~~~~v~~im~~------~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~ 168 (270)
++ +++..+. .....+++++|++ +++++++++++.++++.|.+++++++||+|++|+++|+||.+||++++..
T Consensus 242 l~-~~~~~~~~~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~~~l~Giit~~Dil~~l~~ 320 (323)
T 3t4n_C 242 VL-GLIKGGIYNDLSLSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYILL 320 (323)
T ss_dssp HH-HHHHTTHHHHTTSBHHHHGGGSCTTCCCCEEECTTCBHHHHHHHHHHSCCCEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred HH-HHHhhchhhhccCCHHHHHhhccccCCCCEEECCCCCHHHHHHHHHHhCCCEEEEECCCCcEEEEEEHHHHHHHHHh
Confidence 98 6665432 1224689999998 78999999999999999999999999999989999999999999998553
No 53
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.78 E-value=7.8e-19 Score=151.56 Aligned_cols=169 Identities=21% Similarity=0.249 Sum_probs=140.0
Q ss_pred CCCccccccCCCceeEECCCCCHHHHHHHHHHCCCcEEEEEe-CCEEEEEeeHHHHHHHHHhcCCCCCccchhhccCCCC
Q 024256 42 RPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNP 120 (270)
Q Consensus 42 ~~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~im~~~~ 120 (270)
..+++++|+ ++++++.+++++.+|++.|.+++++++||++ +|+++|++|.+|++ +.+..... ..+++++|.+++
T Consensus 92 ~~~v~~im~--~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~lvGivt~~dl~-~~~~~~~~--~~~v~~~m~~~~ 166 (296)
T 3ddj_A 92 TTPIIDYMT--PNPVTVYNTSDEFTAINIMVTRNFGSLPVVDINDKPVGIVTEREFL-LLYKDLDE--IFPVKVFMSTKV 166 (296)
T ss_dssp TSBGGGTSE--ESCCCEETTSCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHG-GGGGGSCC--CCBHHHHSBCSC
T ss_pred cccHHHhcc--CCCEEEcCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHH-Hhhhcccc--cccHHHhhcCCC
Confidence 668999999 5789999999999999999999999999998 89999999999997 55543332 458999999999
Q ss_pred eeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHHHHHh----------------C-------CCCCCh
Q 024256 121 ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV----------------G-------NTAGSN 177 (270)
Q Consensus 121 ~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~~~----------------~-------~~~~~~ 177 (270)
.++++++++.++++.|.+++.+.+||+|++|+++|+||..|+++.+...+ . ....++
T Consensus 167 ~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l 246 (296)
T 3ddj_A 167 QTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNAIKQLAKAVDKLDPDYFYGKVVKDVMVTNLVTIDELASV 246 (296)
T ss_dssp CCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHHHHTCTHHHHTCBHHHHSBCCCCBCCTTSBH
T ss_pred eEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHHHHhhcChhhhcCcCHHHHhCCCCeEECCCCcH
Confidence 99999999999999999999999999998999999999999998754211 0 133456
Q ss_pred HHHHHHHHHHHHHHhhccCCCCC--CCccccccccccccC
Q 024256 178 NEAASTMMQKFWDSAMALSPNDD--EEDNRSEGSLKFASE 215 (270)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~--~~~t~~di~~~~~~~ 215 (270)
.+++..|.......++++.+.+. +.+|..|+++.+...
T Consensus 247 ~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~Dil~~l~~~ 286 (296)
T 3ddj_A 247 NRAAAEMIVKRIGSLLILNKDNTIRGIITERDLLIALHHI 286 (296)
T ss_dssp HHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEECCCCeEEEEEcHHHHHHHHHHH
Confidence 67888888777777777764433 338999988877543
No 54
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.77 E-value=5.3e-18 Score=139.95 Aligned_cols=119 Identities=17% Similarity=0.198 Sum_probs=107.0
Q ss_pred CCCCccccccCCCceeEECCCCCHHHHHHHHHHCCCcEEEEEe-CCEEEEEeeHHHHHHHHHhcCCCCCccchhhccCCC
Q 024256 41 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPN 119 (270)
Q Consensus 41 ~~~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~im~~~ 119 (270)
...+++++|. ++++++++++|+.+|+++|.+++++++||++ +++++|+||.+|+. +.. ...+++++|+++
T Consensus 11 ~~~~~~~~~~--~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~l~Givt~~dl~-~~~------~~~~v~~im~~~ 81 (213)
T 1vr9_A 11 HHMKVKKWVT--QDFPMVEESATVRECLHRMRQYQTNECIVKDREGHFRGVVNKEDLL-DLD------LDSSVFNKVSLP 81 (213)
T ss_dssp --CBGGGGCB--SCSCEEETTCBHHHHHHHHHHTTSSEEEEECTTSBEEEEEEGGGGT-TSC------TTSBSGGGCBCT
T ss_pred cccCHHHhhc--CCCeEECCCCcHHHHHHHHHHCCCCEEEEEcCCCEEEEEEEHHHHH-hhc------CCCcHHHHccCC
Confidence 4567899999 7899999999999999999999999999999 89999999999996 322 146899999999
Q ss_pred CeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHHHH
Q 024256 120 PECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 168 (270)
Q Consensus 120 ~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~ 168 (270)
++++++++++.+|++.|.+++++++||+|++|+++|+||.+|+++....
T Consensus 82 ~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~Dil~~~~~ 130 (213)
T 1vr9_A 82 DFFVHEEDNITHALLLFLEHQEPYLPVVDEEMRLKGAVSLHDFLEALIE 130 (213)
T ss_dssp TCCEETTSBHHHHHHHHHHCCCSEEEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred CEEECCCCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEEEHHHHHHHHHH
Confidence 9999999999999999999999999999988999999999999987543
No 55
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.75 E-value=1e-17 Score=144.33 Aligned_cols=119 Identities=21% Similarity=0.292 Sum_probs=108.0
Q ss_pred CCCCccccccCCCceeEECCCCCHHHHHHHHHHC-----CCcEEEEEe-CCEEEEEeeHHHHHHHHHhcCCCCCccchhh
Q 024256 41 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLEL-----RLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEK 114 (270)
Q Consensus 41 ~~~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~-----~~~~i~Vv~-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~ 114 (270)
...+++++|+ ++++++++++|+.+|++.|.++ +++++||++ +|+++|+||.+|++ +. ....++++
T Consensus 135 ~~~~v~~iM~--~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~~~lvGivt~~dll-~~------~~~~~v~~ 205 (286)
T 2oux_A 135 EDETAGAIMT--TEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQENHLVGVISLRDLI-VN------DDDTLIAD 205 (286)
T ss_dssp CTTBHHHHCB--SCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTTCBEEEEEEHHHHT-TS------CTTSBHHH
T ss_pred ChHHHHHhCC--CCceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCCCeEEEEEEHHHHH-cC------CCCCcHHH
Confidence 4568999999 6899999999999999999987 788999999 89999999999997 21 23578999
Q ss_pred ccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHHHH
Q 024256 115 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 168 (270)
Q Consensus 115 im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~ 168 (270)
+|+++++++++++++.++++.|.+++.+.+||+|++|+++|+||..|++..+..
T Consensus 206 im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIT~~Dil~~i~~ 259 (286)
T 2oux_A 206 ILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLGIVTVDDIIDVIDD 259 (286)
T ss_dssp HSBSCCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred HcCCCCeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHHH
Confidence 999999999999999999999999999999999989999999999999987543
No 56
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.75 E-value=1.5e-17 Score=142.77 Aligned_cols=117 Identities=21% Similarity=0.299 Sum_probs=107.0
Q ss_pred CCCCccccccCCCceeEECCCCCHHHHHHHHHHC-----CCcEEEEEe-CCEEEEEeeHHHHHHHHHhcCCCCCccchhh
Q 024256 41 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLEL-----RLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEK 114 (270)
Q Consensus 41 ~~~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~-----~~~~i~Vv~-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~ 114 (270)
...+++++|+ ++++++++++|+.+|++.|.++ +++++||++ +|+++|+||.+|++ .. ....++++
T Consensus 133 ~~~~v~~iM~--~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll-~~------~~~~~v~~ 203 (278)
T 2yvy_A 133 EEDEAGGLMT--PEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLI-VA------DPRTRVAE 203 (278)
T ss_dssp CTTBGGGTCB--SCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTTCBEEEEEEHHHHH-HS------CTTCBSTT
T ss_pred CcchHHhhcC--CCceEECCCCcHHHHHHHHHHccCCccceeEEEEECCCCCEEEEEEHHHHh-cC------CCCCcHHH
Confidence 4678999999 6899999999999999999987 789999999 89999999999997 32 13578999
Q ss_pred ccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHH
Q 024256 115 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAA 166 (270)
Q Consensus 115 im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~ 166 (270)
+|.++++++++++++.++++.|.+++...+||+|++|+++|+||..|+++.+
T Consensus 204 im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivT~~Dil~~i 255 (278)
T 2yvy_A 204 IMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVL 255 (278)
T ss_dssp TSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHC
T ss_pred HhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCCCeEEEEEEHHHHHHHH
Confidence 9999999999999999999999999999999999899999999999999873
No 57
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.75 E-value=5.5e-20 Score=170.04 Aligned_cols=155 Identities=23% Similarity=0.195 Sum_probs=25.7
Q ss_pred ChhhhhhhHHHHHHHhhhHHhhCCCCCChhHHHHHHHHhhCCCCcccc-ccCCCceeEECCCCCHHHHHHHHHHCCCcEE
Q 024256 1 MERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTI-IPEKSKVVTISPTDTVLMATKKMLELRLSSA 79 (270)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~i-m~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i 79 (270)
|+.+++.++++++++.| |+++++.+...+...+.+.+.+..++ |+ ++++++++++|+.+++++|.+++++++
T Consensus 59 m~~vt~~~la~~la~~g-----g~G~I~~~~~~e~~~~~v~~V~~~e~gM~--~~~~~v~~~~tv~eal~~m~~~~~s~~ 131 (503)
T 1me8_A 59 MQSVSGEKMAIALAREG-----GISFIFGSQSIESQAAMVHAVKNFKAGFV--VSDSNVKPDQTFADVLAISQRTTHNTV 131 (503)
T ss_dssp CTTTCSHHHHHHHHHTT-----CEEEECCSSCHHHHHHHHHHHHTTTC--------------------------------
T ss_pred chhhhHHHHHHHHHhCC-----CcceeeCCCCHHHHHHHHhhhhhcccCcc--cCCeEECCCCcHHHHHHHHHHcCceEE
Confidence 67778889999999999 88777754222222222222233455 88 689999999999999999999999999
Q ss_pred EEEe-C---CEEEEEeeHHHHHHHHHhcCCCCCccchhhccCCC--CeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcE
Q 024256 80 VVTV-E---NKPRGILTSKDILMRVISQNLPADSTLVEKVMTPN--PECATIDTPIVDALHIMHDGKFLHLPVVDRDGDV 153 (270)
Q Consensus 80 ~Vv~-~---~~~~Givt~~dl~~~~~~~~~~~~~~~v~~im~~~--~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~ 153 (270)
||++ + ++++|+||.+|++ +. ......+++++|+++ ++++++++++.+|+++|.+++++.+||+|++|++
T Consensus 132 pVvd~~~~~g~lvGiVt~~Dl~-~~----~~~~~~~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~l 206 (503)
T 1me8_A 132 AVTDDGTPHGVLLGLVTQRDYP-ID----LTQTETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHL 206 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEECCCcCCeEEEEEEHHHHH-hh----hccccCcHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCCeE
Confidence 9999 5 8999999999996 33 122357899999987 9999999999999999999999999999999999
Q ss_pred EEEEeHHHHHHHHH
Q 024256 154 VDVVDVIHITHAAV 167 (270)
Q Consensus 154 ~Givt~~dll~~~~ 167 (270)
+|+||.+||++...
T Consensus 207 vGiIT~~Dil~~~~ 220 (503)
T 1me8_A 207 RYIVFRKDYDRSQV 220 (503)
T ss_dssp --------------
T ss_pred EEEEEecHHHHhhh
Confidence 99999999999754
No 58
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.73 E-value=9.6e-18 Score=143.41 Aligned_cols=170 Identities=22% Similarity=0.244 Sum_probs=130.9
Q ss_pred CCCccccccCCCceeEECCCCCHHHHHHHHHHCCCcEEEEEe-CCEEEEEeeHHHHHHH-HHhcCCCCCccchhhccCCC
Q 024256 42 RPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMR-VISQNLPADSTLVEKVMTPN 119 (270)
Q Consensus 42 ~~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~-~~~~~Givt~~dl~~~-~~~~~~~~~~~~v~~im~~~ 119 (270)
..+++++|. ++++++++++++.+|++.|.+++.+++||++ +|+++|++|..|++ + .+..+......+++++|.++
T Consensus 59 ~~~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~di~-~~~~~~~~~~~~~~v~~~m~~~ 135 (282)
T 2yzq_A 59 EEQLAMLVK--RDVPVVKENDTLKKAAKLMLEYDYRRVVVVDSKGKPVGILTVGDII-RRYFAKSEKYKGVEIEPYYQRY 135 (282)
T ss_dssp -----CCCB--SCCCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHH-HHTTTTCSGGGGCBSTTTSBSC
T ss_pred cCCHHHHcC--CCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHH-HHHHhccCCcccCcHHHHhCCC
Confidence 467999999 5689999999999999999999999999999 78999999999998 5 55433222356899999999
Q ss_pred CeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHH------HHHH------H-------------------
Q 024256 120 PECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHIT------HAAV------A------------------- 168 (270)
Q Consensus 120 ~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll------~~~~------~------------------- 168 (270)
++++++++++.++++.|.+++++.+||+|++|+++|++|..|++ +... .
T Consensus 136 ~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (282)
T 2yzq_A 136 VSIVWEGTPLKAALKALLLSNSMALPVVDSEGNLVGIVDETDLLRDSEIVRIMKSTELAASSEEEWILESHPTLLFEKFE 215 (282)
T ss_dssp CCCEETTSBHHHHHHHHHTCSSSEEEEECTTSCEEEEEEGGGGGGCGGGCC-----------------------------
T ss_pred CEEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHhhhhhhhhhhccchhhhhhhhhhhcccchHHHHhHhh
Confidence 99999999999999999999999999999889999999999998 4321 0
Q ss_pred ---------HhC-------CCCCChHHHHHHHHHHHHHHhhccCCCCC--CCcccccccccccc
Q 024256 169 ---------TVG-------NTAGSNNEAASTMMQKFWDSAMALSPNDD--EEDNRSEGSLKFAS 214 (270)
Q Consensus 169 ---------~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~t~~di~~~~~~ 214 (270)
.+. ....++.+++..|.......++++.+.+. +.+|..|+++.+..
T Consensus 216 ~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~lvGiit~~Dil~~~~~ 279 (282)
T 2yzq_A 216 LQLPNKPVAEIMTRDVIVATPHMTVHEVALKMAKYSIEQLPVIRGEGDLIGLIRDFDLLKVLVK 279 (282)
T ss_dssp ---CCCBGGGTCBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEETTTEEEEEEEHHHHGGGGCC
T ss_pred hhhccCCHHHhcCCCCceeCCCCCHHHHHHHHHHcCcceeEEECCCCCEEEEEeHHHHHHHHHh
Confidence 000 12244556777777777777777764322 33888888887754
No 59
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.73 E-value=4.4e-17 Score=142.89 Aligned_cols=140 Identities=15% Similarity=0.175 Sum_probs=117.7
Q ss_pred CCCChhHHHHHHHHh-----hCCCCcccc---ccCCCceeEECCCCCHHHHHHHHHHCCCcEEEEEe-CCEEEEEeeHHH
Q 024256 25 SISGPNTFIETLRER-----MFRPSLSTI---IPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKD 95 (270)
Q Consensus 25 ~~~~~~~~~~~~~~~-----~~~~~v~~i---m~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~-~~~~~Givt~~d 95 (270)
|.++..+.+..+... ....+++++ |. ++++++++++++.+|++.|.+++.+++||++ +|+++|+||..|
T Consensus 159 Givt~~dl~~~~~~~~~~~~~~~~~v~~l~~~m~--~~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~~~~~~Giit~~d 236 (334)
T 2qrd_G 159 SVLTQYRILKFISMNCKETAMLRVPLNQMTIGTW--SNLATASMETKVYDVIKMLAEKNISAVPIVNSEGTLLNVYESVD 236 (334)
T ss_dssp EEEEHHHHHHHHHHHCGGGGGCCCBGGGSSCSBC--SSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETHH
T ss_pred EEeeHHHHHHHHHhhccchhhhhCcHHHhCCccc--CCceEECCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEHHH
Confidence 455566666555432 135678884 87 6889999999999999999999999999999 789999999999
Q ss_pred HHHHHHhcCC-CCCccchhhccCC------CCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHHH
Q 024256 96 ILMRVISQNL-PADSTLVEKVMTP------NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 167 (270)
Q Consensus 96 l~~~~~~~~~-~~~~~~v~~im~~------~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~~ 167 (270)
++ +.+..+. .....++.++|++ +++++++++++.+|++.|.+++++++||+|++|+++|+||..||++++.
T Consensus 237 l~-~~~~~~~~~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~l~Giit~~dil~~~~ 314 (334)
T 2qrd_G 237 VM-HLIQDGDYSNLDLSVGEALLKRPANFDGVHTCRATDRLDGIFDAIKHSRVHRLFVVDENLKLEGILSLADILNYII 314 (334)
T ss_dssp HH-HHHTTSCGGGGGSBHHHHHTTCCTTCCCCCEECTTCBHHHHHHHHHHSCCCEEEEECTTCBEEEEEEHHHHHHHHH
T ss_pred HH-HHhhccccccccCcHHHHHhcccccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHHH
Confidence 98 6665432 2235789999984 8899999999999999999999999999998899999999999999754
No 60
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.72 E-value=3.2e-17 Score=138.27 Aligned_cols=123 Identities=15% Similarity=0.123 Sum_probs=103.4
Q ss_pred CCCCccccccCCCceeEECCCCCHHHHHHHHHHCCCcEEEEEeC---CEEEEEeeHHHHHHHHHhcC----CC-------
Q 024256 41 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVE---NKPRGILTSKDILMRVISQN----LP------- 106 (270)
Q Consensus 41 ~~~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~~---~~~~Givt~~dl~~~~~~~~----~~------- 106 (270)
...+|+|+|+ ++++++.+++++.+|.++|.+++++++||+++ ++++|+|+..||+ +++... ..
T Consensus 11 ~~~~v~diMt--~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~-~~l~~~~~~~~~~~~~~~~ 87 (250)
T 2d4z_A 11 YNIQVGDIMV--RDVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVE-GLLQRRISAYRRQPAAAAE 87 (250)
T ss_dssp SSCBTTSSSB--SSCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHH-HHHHHHHHTTSSSCCCCCC
T ss_pred CCCChHHhcC--CCCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHH-HHHHHhhhhhhhhhhhhhc
Confidence 4568999999 78999999999999999999999999999983 6899999999998 443211 00
Q ss_pred -----------------------C--------------------------------------------------------
Q 024256 107 -----------------------A-------------------------------------------------------- 107 (270)
Q Consensus 107 -----------------------~-------------------------------------------------------- 107 (270)
.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (250)
T 2d4z_A 88 ADEEGRNGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQVASRF 167 (250)
T ss_dssp BCCC---------------------------------------------------------------------------C
T ss_pred ccccccccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccccccCccc
Confidence 0
Q ss_pred ----------------Cccch--h-hccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHHH
Q 024256 108 ----------------DSTLV--E-KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 167 (270)
Q Consensus 108 ----------------~~~~v--~-~im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~~ 167 (270)
...++ . .+|++.++++.+++++.++..+|...+++++||++ .|+++||||++||++++.
T Consensus 168 ~~~i~~~~~~~~~~~~l~~~Vdl~~~~md~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~-~GrLVGIVTrkDl~kai~ 245 (250)
T 2d4z_A 168 EEMLTLEEIYRWEQREKNVVVNFETCRIDQSPFQLVEGTSLQKTHTLFSLLGLDRAYVTS-MGKLVGVVALAEIQAAIE 245 (250)
T ss_dssp CSCCBHHHHHHHHHHHTTCBCCTTSSCEECCSCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHH
T ss_pred ccccChhhhhhHHHHhcCceeccccccccCCCeEECCCCcHHHHHHHHHHhCCeEEEEEE-CCEEEEEEEHHHHHHHHH
Confidence 01122 2 36899999999999999999999999999999998 799999999999999743
No 61
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.71 E-value=1.3e-16 Score=147.37 Aligned_cols=151 Identities=22% Similarity=0.291 Sum_probs=125.7
Q ss_pred ChhhhhhhHHHHHHHhhhHHhhCCCCCCh----hHHHHHHHHhhCCCCccccccCCCceeEECCCCCHHHHHHHHHHCCC
Q 024256 1 MERAAEKGKAIAAAVEGVEKHWGTSISGP----NTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRL 76 (270)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~----~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~ 76 (270)
|+.+++.+++.++++.| |.|.++. .+..+.+.... .+.++|. ++++++++++|+.++++.|.++++
T Consensus 52 M~~vt~~eLa~av~~~G-----g~G~i~~~~~~e~~~~~i~~v~---~~~~im~--~~~~~v~~~~tv~ea~~~m~~~~~ 121 (491)
T 1zfj_A 52 MDTVTGSKMAIAIARAG-----GLGVIHKNMSITEQAEEVRKVK---RSENGVI--IDPFFLTPEHKVSEAEELMQRYRI 121 (491)
T ss_dssp CTTTCSHHHHHHHHHTT-----CEEEECCSSCHHHHHHHHHHHH---HHTTTTS--SSCCCBCSSSBHHHHHHHHHHTTC
T ss_pred chhccHHHHHHHHHHcC-----CceEEeCCCCHHHHHHHHHHHh---hHHhcCc--CCCeEECCCCcHHHHHHHHHHcCC
Confidence 56667778888888888 7665542 23333333222 3578999 689999999999999999999999
Q ss_pred cEEEEEe---CCEEEEEeeHHHHHHHHHhcCCCCCccchhhccCC-CCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCc
Q 024256 77 SSAVVTV---ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTP-NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGD 152 (270)
Q Consensus 77 ~~i~Vv~---~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~im~~-~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~ 152 (270)
+.+||++ +++++|+||.+|++ .. . ....+++++|++ +++++++++++.++++.|.+++.+.+||+|++|+
T Consensus 122 ~~~pVvd~~~~~~lvGivt~~Dl~-~~----~-~~~~~v~~im~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~ 195 (491)
T 1zfj_A 122 SGVPIVETLANRKLVGIITNRDMR-FI----S-DYNAPISEHMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGR 195 (491)
T ss_dssp SEEEEESCTTTCBEEEEEEHHHHH-HC----S-CSSSBTTTSCCCSCCCCEETTCCHHHHHHHHHHTTCSEEEEECTTSB
T ss_pred CEEEEEEeCCCCEEEEEEEHHHHh-hh----c-cCCCcHHHHcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCc
Confidence 9999997 68999999999996 32 1 235789999998 8999999999999999999999999999999999
Q ss_pred EEEEEeHHHHHHHHH
Q 024256 153 VVDVVDVIHITHAAV 167 (270)
Q Consensus 153 ~~Givt~~dll~~~~ 167 (270)
++|++|..||++...
T Consensus 196 lvGivt~~Dil~~~~ 210 (491)
T 1zfj_A 196 LSGLITIKDIEKVIE 210 (491)
T ss_dssp EEEEEEHHHHHHHHH
T ss_pred EEEEEEHHHHHHHHh
Confidence 999999999999754
No 62
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.70 E-value=7.4e-19 Score=162.52 Aligned_cols=151 Identities=26% Similarity=0.311 Sum_probs=27.7
Q ss_pred ChhhhhhhHHHHHHHhhhHHhhCCCCCChh----HHHHHHHHhhCCCCccccccCCCceeEECCCCCHHHHHHHHHHCCC
Q 024256 1 MERAAEKGKAIAAAVEGVEKHWGTSISGPN----TFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRL 76 (270)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~----~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~ 76 (270)
|+.+++..+++++++.| |+++++.+ +....+... .++.++|+ ++++++++++|+.+|+++|.++++
T Consensus 57 m~~v~~~~lA~al~~~G-----glG~i~~~~~~e~~~~~v~~v---~~~~~iM~--~~~~~v~~~~tv~ea~~~m~~~~~ 126 (494)
T 1vrd_A 57 MDTVTEAALAKALAREG-----GIGIIHKNLTPDEQARQVSIV---KKTENGII--YDPITVTPDMTVKEAIDLMAEYKI 126 (494)
T ss_dssp CTTTCSHHHHHHHHTTT-----CEEEECSSSCHHHHHHHHHHH---HTC-------------------------------
T ss_pred hHHHhHHHHHHHHHHcC-----CceEEecCCChHHHHHHHHhh---hhHhhcCc--cCCeEECCCCCHHHHHHHHHHcCc
Confidence 67778888888999999 87666644 222222222 25788999 689999999999999999999999
Q ss_pred cEEEEEe-CCEEEEEeeHHHHHHHHHhcCCCCCccchhhccCC--CCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcE
Q 024256 77 SSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTP--NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDV 153 (270)
Q Consensus 77 ~~i~Vv~-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~ 153 (270)
+.+||++ +++++|+||.+|+. +. . ....++.++|++ +++++++++++.+++++|.+++++.+||+|++|++
T Consensus 127 ~~~pVvd~~~~lvGivt~~Dl~-~~--~---~~~~~v~~im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~l 200 (494)
T 1vrd_A 127 GGLPVVDEEGRLVGLLTNRDVR-FE--K---NLSKKIKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKL 200 (494)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eEEEEEcCCCEEEEEEEHHHHH-hh--c---CCCCcHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeE
Confidence 9999999 78999999999996 32 1 135789999998 99999999999999999999999999999999999
Q ss_pred EEEEeHHHHHHHHH
Q 024256 154 VDVVDVIHITHAAV 167 (270)
Q Consensus 154 ~Givt~~dll~~~~ 167 (270)
+|+||..|+++...
T Consensus 201 vGiIt~~Dll~~~~ 214 (494)
T 1vrd_A 201 VGLITIKDIMSVIE 214 (494)
T ss_dssp --------CHHHHT
T ss_pred EEEEEHHHHHhhhc
Confidence 99999999999743
No 63
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.70 E-value=5.6e-17 Score=151.03 Aligned_cols=122 Identities=11% Similarity=0.073 Sum_probs=107.0
Q ss_pred CCCccccccCCCceeEECCC-CCHHHHHHHHHHCCCcEEEEEe--CCEEEEEeeHHHHHHHHHhcCCCCCccchhhccCC
Q 024256 42 RPSLSTIIPEKSKVVTISPT-DTVLMATKKMLELRLSSAVVTV--ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTP 118 (270)
Q Consensus 42 ~~~v~~im~~~~~~~~v~~~-~tv~~a~~~m~~~~~~~i~Vv~--~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~im~~ 118 (270)
..+|+++|+ ++++++.++ +|+.+|+++|.+++++++||++ +++++|+||.+|++ +.+..+......+++++|++
T Consensus 383 ~~~V~diM~--~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll-~~l~~~~~~~~~~V~~im~~ 459 (527)
T 3pc3_A 383 SLAIAELEL--PAPPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLI-TQIVSMNRQQSDPAIKALNK 459 (527)
T ss_dssp TSBGGGGCC--CCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHH-HHHHHHCCCTTSBGGGGEET
T ss_pred CCcHHHhCc--CCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHH-HHHHhccCcCCCcHHHHhcC
Confidence 467999999 789999999 9999999999999999999998 78999999999998 44443333345799999999
Q ss_pred CCeeecCCCCHHHHHHHhHhCCCCEEEEEeCC----CcEEEEEeHHHHHHHHHH
Q 024256 119 NPECATIDTPIVDALHIMHDGKFLHLPVVDRD----GDVVDVVDVIHITHAAVA 168 (270)
Q Consensus 119 ~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~----g~~~Givt~~dll~~~~~ 168 (270)
+++++++++++.+++++|.+++ .+||+|++ |+++|+||..||++++..
T Consensus 460 ~~~~v~~~~~l~~a~~~m~~~~--~~pVVd~~~~~~g~lvGIVT~~Dll~~l~~ 511 (527)
T 3pc3_A 460 RVIRLNESEILGKLARVLEVDP--SVLILGKNPAGKVELKALATKLDVTTFIAA 511 (527)
T ss_dssp TCCEEETTSBHHHHHHHHTTCS--EEEEEEECSSSCEEEEEEEEHHHHHHHHHT
T ss_pred CCeEECCCCcHHHHHHHHhhCC--EEEEEeCCcccCCeEEEEEEHHHHHHHHHh
Confidence 9999999999999999997765 57999974 899999999999998553
No 64
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.69 E-value=2.7e-16 Score=144.42 Aligned_cols=118 Identities=21% Similarity=0.291 Sum_probs=107.1
Q ss_pred CCCCccccccCCCceeEECCCCCHHHHHHHHHHC-----CCcEEEEEe-CCEEEEEeeHHHHHHHHHhcCCCCCccchhh
Q 024256 41 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLEL-----RLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEK 114 (270)
Q Consensus 41 ~~~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~-----~~~~i~Vv~-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~ 114 (270)
...+++++|+ ++++++++++|+.+|++.|.++ +++++||+| +++++|++|.+|++ .. ..+.++++
T Consensus 153 ~~~~v~~iM~--~~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~~~lvGiVt~~Dll-~~------~~~~~v~d 223 (473)
T 2zy9_A 153 EEDEAGGLMT--PEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLI-VA------DPRTRVAE 223 (473)
T ss_dssp CTTBSTTTCB--SCEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTTSBEEEEEEHHHHH-HS------CTTSBGGG
T ss_pred CCCCHHHhCC--CCceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCCCcEEEEEEHHHHh-cC------CCCCcHHH
Confidence 4668999999 6899999999999999999986 578999999 79999999999997 31 13578999
Q ss_pred ccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHHH
Q 024256 115 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 167 (270)
Q Consensus 115 im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~~ 167 (270)
+|+++++++++++++.++++.|.+++...+||+|++|+++|+||..|+++...
T Consensus 224 im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~g~lvGiIT~~Dil~~i~ 276 (473)
T 2zy9_A 224 IMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLE 276 (473)
T ss_dssp TSBSSCCCEESSSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred HhCCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCCCEEEEEEehHhhHHHHH
Confidence 99999999999999999999999999999999999999999999999998743
No 65
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.68 E-value=2.1e-17 Score=156.84 Aligned_cols=123 Identities=11% Similarity=0.003 Sum_probs=105.1
Q ss_pred CCCCccccccCCCceeEECCCCCHHHHHHHHH-HCCCcEEEEEe-CCEEEEEeeHHHHHHHHHhcCCC------------
Q 024256 41 FRPSLSTIIPEKSKVVTISPTDTVLMATKKML-ELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLP------------ 106 (270)
Q Consensus 41 ~~~~v~~im~~~~~~~~v~~~~tv~~a~~~m~-~~~~~~i~Vv~-~~~~~Givt~~dl~~~~~~~~~~------------ 106 (270)
...+|+|+|+|+++++++++++|+.++.+.|. +++++.+||+| +++++|+|+.+|+. +.+.+...
T Consensus 451 ~~~~V~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~~~lvGiVt~~DL~-~~l~~~~~~~~~~~~~~~~~ 529 (632)
T 3org_A 451 PEMTAREIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDANGYLLGAISRKEIV-DRLQHVLEDVPEPIAGHRTL 529 (632)
T ss_dssp TTSBHHHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTTCBBCCEESHHHHT-TTTTTC--------------
T ss_pred ccCcHHHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEecCCeEEEEEEHHHHH-HHHHHHhhhcccccccccce
Confidence 45689999998788999999999999999999 79999999999 79999999999997 44432210
Q ss_pred -----------------------------------CCccchhhccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCC
Q 024256 107 -----------------------------------ADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDG 151 (270)
Q Consensus 107 -----------------------------------~~~~~v~~im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g 151 (270)
....+++++|+++++++++++++.++++.|.+++.+++||+ ++|
T Consensus 530 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVv-e~G 608 (632)
T 3org_A 530 VLLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVT-ERG 608 (632)
T ss_dssp -----------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEE-ETT
T ss_pred eccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEE-ECC
Confidence 00013788999999999999999999999999999999999 689
Q ss_pred cEEEEEeHHHHHHH
Q 024256 152 DVVDVVDVIHITHA 165 (270)
Q Consensus 152 ~~~Givt~~dll~~ 165 (270)
+++|+||.+|++++
T Consensus 609 ~lvGIVT~~Dll~~ 622 (632)
T 3org_A 609 KLVGIVEREDVAYG 622 (632)
T ss_dssp EEEEEEEGGGTEEC
T ss_pred EEEEEEehhhHHHH
Confidence 99999999999874
No 66
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.66 E-value=4.2e-16 Score=136.46 Aligned_cols=141 Identities=16% Similarity=0.182 Sum_probs=113.8
Q ss_pred CCCChhHHHHHHHHhhCC--------CCcccc--ccCCCceeEECCCCCHHHHHHHHHHCCCcEEEEEe-CCEEEEEeeH
Q 024256 25 SISGPNTFIETLRERMFR--------PSLSTI--IPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTS 93 (270)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~--------~~v~~i--m~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~-~~~~~Givt~ 93 (270)
|.++..+.+..+...... .+++++ |. .++++++++++++.++++.|.+++++++||++ +|+++|++|.
T Consensus 164 Givt~~dl~~~~~~~~~~~~~~~~~~~~v~~~~v~~-~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~l~Giit~ 242 (330)
T 2v8q_E 164 YILTHKRILKFLKLFITEFPKPEFMSKSLEELQIGT-YANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSK 242 (330)
T ss_dssp EEECHHHHHHHHHHHSCSSSCCGGGGSBHHHHTCSB-CSSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEG
T ss_pred EEEcHHHHHHHHHHHhhccCchhhhcCCHHHhcccC-cCCceEECCCCCHHHHHHHHHHcCCCeEEEECCCCcEEEEEEH
Confidence 455666666666543222 334444 32 14688999999999999999999999999999 8999999999
Q ss_pred HHHHHHHHhcC-CCCCccchhhcc------CCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHH
Q 024256 94 KDILMRVISQN-LPADSTLVEKVM------TPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAA 166 (270)
Q Consensus 94 ~dl~~~~~~~~-~~~~~~~v~~im------~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~ 166 (270)
.|++ +.+... ......++.++| +++++++++++++.++++.|.+++++++||+|++|+++|+||..||++++
T Consensus 243 ~dl~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~l~Giit~~Dil~~~ 321 (330)
T 2v8q_E 243 FDVI-NLAAEKTYNNLDVSVTKALQHRSHYFEGVLKCYLHETLEAIINRLVEAEVHRLVVVDEHDVVKGIVSLSDILQAL 321 (330)
T ss_dssp GGTG-GGGGSSCCCCCSSBHHHHGGGCCSCCCSCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHH
T ss_pred HHHH-HHHhccccccccCcHHHHHhccccccCCCeEECCCCcHHHHHHHHHHCCCcEEEEEcCCCcEEEEEeHHHHHHHH
Confidence 9998 555432 222246899998 47899999999999999999999999999999889999999999999975
Q ss_pred H
Q 024256 167 V 167 (270)
Q Consensus 167 ~ 167 (270)
.
T Consensus 322 ~ 322 (330)
T 2v8q_E 322 V 322 (330)
T ss_dssp H
T ss_pred H
Confidence 4
No 67
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.63 E-value=5e-17 Score=149.79 Aligned_cols=147 Identities=29% Similarity=0.391 Sum_probs=23.3
Q ss_pred ChhhhhhhHHHHHHHhhhHHhhCCCCCChh----HHHHHHHHhhCCCCccccccCCCceeEECCCCCHHHHHHHHHHCCC
Q 024256 1 MERAAEKGKAIAAAVEGVEKHWGTSISGPN----TFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRL 76 (270)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~----~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~ 76 (270)
|...++.+++.++++.| |+|.++.+ +..+.+.... ...+.|. .+++++++++|+.++++.|.++++
T Consensus 55 m~~vt~~ela~ava~~G-----glG~i~~~~~~e~~~~~I~~v~---~~~~~m~--~~~~~v~~~~tv~ea~~~~~~~~~ 124 (486)
T 2cu0_A 55 MDTVTEWEMAVAMAREG-----GLGVIHRNMGIEEQVEQVKRVK---RAERLIV--EDVITIAPDETVDFALFLMEKHGI 124 (486)
T ss_dssp CTTTCSHHHHHHHHHTT-----CEEEECSSSCHHHHHHHHHHHH---TCC------------------------------
T ss_pred ceeecHHHHHHHHHhcC-----CceeecCCCCHHHHHHHHHhhc---chhhccc--cCceEECCCCCHHHHHHHHHHcCC
Confidence 56667788899999988 77766632 2233333222 3467888 789999999999999999999999
Q ss_pred cEEEEEeCCEEEEEeeHHHHHHHHHhcCCCCCccchhhccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEE
Q 024256 77 SSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDV 156 (270)
Q Consensus 77 ~~i~Vv~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Gi 156 (270)
+.+||+++++++|+|+.+|++ . ....++.++|+++++++++++++.++++.|.+++.+.+||+|++|+++|+
T Consensus 125 ~~~pVvd~~~lvGivt~~Dl~-~-------~~~~~v~~im~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g~lvGi 196 (486)
T 2cu0_A 125 DGLPVVEDEKVVGIITKKDIA-A-------REGKLVKELMTKEVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGL 196 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cEEEEEECCEEEEEEEHHHhc-c-------CCCCCHHHHccCCCeEECCcCcHHHHHHHHHHcCCCEEEEEecCCeEEEE
Confidence 999999989999999999996 3 13568999999899999999999999999999999999999999999999
Q ss_pred EeHHHHHHH
Q 024256 157 VDVIHITHA 165 (270)
Q Consensus 157 vt~~dll~~ 165 (270)
||.+||++.
T Consensus 197 iT~~Dil~~ 205 (486)
T 2cu0_A 197 ITMSDLVAR 205 (486)
T ss_dssp ---------
T ss_pred EEHHHHHHh
Confidence 999999987
No 68
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.58 E-value=1.8e-17 Score=153.91 Aligned_cols=151 Identities=25% Similarity=0.310 Sum_probs=91.7
Q ss_pred ChhhhhhhHHHHHHHhhhHHhhCCCCCChh----HHHHHHHHhhCCCCccccccCCCceeEECCCCCHHHHHHHHHHCCC
Q 024256 1 MERAAEKGKAIAAAVEGVEKHWGTSISGPN----TFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRL 76 (270)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~----~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~ 76 (270)
|+.+++.+++.++++.| |.++++.+ +..+.+... .++.++|. ++++++++++|+.+|+++|.++++
T Consensus 70 md~~t~~~la~~ia~~g-----g~gii~~~~t~e~~~~~v~~v---~~~~~im~--~~~~~v~~~~tv~ea~~~m~~~~~ 139 (514)
T 1jcn_A 70 MDTVTEADMAIAMALMG-----GIGFIHHNCTPEFQANEVRKV---KNFEQGFI--TDPVVLSPSHTVGDVLEAKMRHGF 139 (514)
T ss_dssp CTTTCSHHHHHHHHHTT-----CEEEECCSSCHHHHHHHHHHH---HTCCTTSC--SSCCCCCC----------------
T ss_pred hhhhhhhhHHHHHHhcC-----CeeEEecCCCHHHHHHHHHhh---hhhhhccc--cCCEEECCCCCHHHHHHHHHhcCC
Confidence 67778888899999888 76665432 222222222 26889998 678999999999999999999999
Q ss_pred cEEEEEeC----CEEEEEeeHHHHHHHHHhcCCCCCccchhhccCC--CCeeecCCCCHHHHHHHhHhCCCCEEEEEeCC
Q 024256 77 SSAVVTVE----NKPRGILTSKDILMRVISQNLPADSTLVEKVMTP--NPECATIDTPIVDALHIMHDGKFLHLPVVDRD 150 (270)
Q Consensus 77 ~~i~Vv~~----~~~~Givt~~dl~~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~ 150 (270)
+.+||+++ ++++|+||.+|+. +... .....++.++|++ +++++++++++.+++++|.+++.+.+||+|++
T Consensus 140 ~~~pVvd~~~~~~~lvGiVt~~Dl~-~~~~---~~~~~~v~~vm~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~ 215 (514)
T 1jcn_A 140 SGIPITETGTMGSKLVGIVTSRDID-FLAE---KDHTTLLSEVMTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVNDC 215 (514)
T ss_dssp -CEESCC--------CCEECTTTTC--------------------CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEESSS
T ss_pred CEEEEEeCCCcCCEEEEEEEHHHHH-hhhh---ccCCCCHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCCcccEECCC
Confidence 99999984 7999999999995 3211 1234689999998 99999999999999999999999999999999
Q ss_pred CcEEEEEeHHHHHHH
Q 024256 151 GDVVDVVDVIHITHA 165 (270)
Q Consensus 151 g~~~Givt~~dll~~ 165 (270)
|+++|+||.+|+++.
T Consensus 216 g~lvGiIt~~Dll~~ 230 (514)
T 1jcn_A 216 DELVAIIARTDLKKN 230 (514)
T ss_dssp SCCC----CCCCSSC
T ss_pred CeEEEEEEHHHHHHH
Confidence 999999999998875
No 69
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.58 E-value=7.9e-15 Score=113.53 Aligned_cols=140 Identities=15% Similarity=0.236 Sum_probs=86.3
Q ss_pred EEeeHHHHHHHHHhcCCCCCccchhhccCC--CCeeecCCCCHHHHHHHhHhCCCCEEEEEeCC-CcEEEEEeHHHHHHH
Q 024256 89 GILTSKDILMRVISQNLPADSTLVEKVMTP--NPECATIDTPIVDALHIMHDGKFLHLPVVDRD-GDVVDVVDVIHITHA 165 (270)
Q Consensus 89 Givt~~dl~~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~-g~~~Givt~~dll~~ 165 (270)
|.++..+- +.+.+.......+++++|++ +++++++++++.+|++.|.+++++++||+|++ |+++|+||.+|+++.
T Consensus 4 g~l~~~e~--~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~ 81 (148)
T 3lv9_A 4 GLIDESEQ--RLVDNIFEFEEKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQ 81 (148)
T ss_dssp ----------------CGGGTCBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHH
T ss_pred CccCHHHH--HHHHHHhccCCCCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHH
Confidence 44444332 44444444556899999998 89999999999999999999999999999987 899999999999986
Q ss_pred HHHHhCCCCCChHHHHHHHHHHHHHHhhccCCCCCCCccccccccccccCCCCccccccCCCCCCCCCCceeEEeecCCC
Q 024256 166 AVATVGNTAGSNNEAASTMMQKFWDSAMALSPNDDEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNKG 245 (270)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~di~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~VvD~~g 245 (270)
..... ..++.+. ......+. ...+..++...+... .. ...+|+|++|
T Consensus 82 ~~~~~---~~~v~~~--------m~~~~~v~----~~~~l~~~~~~m~~~----------~~--------~~l~Vvd~~g 128 (148)
T 3lv9_A 82 KINEN---KIELEEI--------LRDIIYIS----ENLTIDKALERIRKE----------KL--------QLAIVVDEYG 128 (148)
T ss_dssp HHHHS---CCCGGGT--------CBCCEEEE----TTSBHHHHHHHHHHH----------TC--------SEEEEECTTS
T ss_pred HhcCC---CccHHHh--------cCCCeEEC----CCCCHHHHHHHHHhc----------CC--------eEEEEEeCCC
Confidence 33210 0000000 00000000 001222222222100 11 1377999999
Q ss_pred CeeEeecCCCChHHHHHhhhhh
Q 024256 246 LMHRFTCGMLPFPNFIEVTNYE 267 (270)
Q Consensus 246 ~l~~~~vGivs~~Dil~~i~~~ 267 (270)
++ +|+||++|+++++..+
T Consensus 129 ~~----~Giit~~dil~~l~~~ 146 (148)
T 3lv9_A 129 GT----SGVVTIEDILEEIVGE 146 (148)
T ss_dssp SE----EEEEEHHHHHHHHHHT
T ss_pred CE----EEEEEHHHHHHHHhCc
Confidence 99 9999999999998664
No 70
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.56 E-value=1.2e-14 Score=113.88 Aligned_cols=58 Identities=17% Similarity=0.213 Sum_probs=52.9
Q ss_pred cchhhccCC--CCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHHH
Q 024256 110 TLVEKVMTP--NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 167 (270)
Q Consensus 110 ~~v~~im~~--~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~~ 167 (270)
.+++++|+| ++.++++++|+.+|+++|.+++++++||+|++|+++|+||.+|++++..
T Consensus 15 ~~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~~~lvGiit~~Di~~~~~ 74 (156)
T 3k6e_A 15 GQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQM 74 (156)
T ss_dssp TTGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC-CBEEEEEEHHHHHHHHH
T ss_pred ccHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEecchhhhhh
Confidence 478999987 7899999999999999999999999999998899999999999998744
No 71
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.56 E-value=2.9e-15 Score=118.88 Aligned_cols=57 Identities=16% Similarity=0.260 Sum_probs=54.5
Q ss_pred ccchhhccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHH
Q 024256 109 STLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 165 (270)
Q Consensus 109 ~~~v~~im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~ 165 (270)
..+|+++|+++++++++++++.+|++.|.+++++.+||+|++|+++|+||.+||++.
T Consensus 17 ~~~V~diM~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dll~~ 73 (170)
T 4esy_A 17 QVPIRDILTSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQNGHLVGIITESDFLRG 73 (170)
T ss_dssp TSBGGGGCCSCCCCEETTSBHHHHHHHHHHTTCSEEEEECTTSCEEEEEEGGGGGGG
T ss_pred CCCHHHhcCCCCcEECCcCcHHHHHHHHHHcCCeEEEEEcCCccEEEEEEHHHHHHH
Confidence 468999999999999999999999999999999999999999999999999999875
No 72
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=99.53 E-value=2.4e-14 Score=96.70 Aligned_cols=69 Identities=30% Similarity=0.415 Sum_probs=62.3
Q ss_pred eeEECCCCCHHHHHHHHHHCCCcEEEEEeCCEEEEEeeHHHHHHHHHhcCCCCCccchhhccCCCCeee
Q 024256 55 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECA 123 (270)
Q Consensus 55 ~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~im~~~~~~v 123 (270)
+++++|++|+.+|+++|.+++++++||+++|+++|++|.+|+++++..++.+..+.+++++|+++++++
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d~~~lvGIvT~~Di~~~~~~~~~~~~~~~V~~iMt~~~iTV 70 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEGDEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPVKI 70 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEETTEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECTTCC
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHHHHHHhcCCCcccCCHHHhcCCCCeEC
Confidence 689999999999999999999999999999999999999999866676666666789999999988764
No 73
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.53 E-value=3.9e-14 Score=112.65 Aligned_cols=142 Identities=13% Similarity=0.204 Sum_probs=82.0
Q ss_pred EEEEeeHHHHHHHHHhcCCCCCccchhhccC--CCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCC-CcEEEEEeHHHHH
Q 024256 87 PRGILTSKDILMRVISQNLPADSTLVEKVMT--PNPECATIDTPIVDALHIMHDGKFLHLPVVDRD-GDVVDVVDVIHIT 163 (270)
Q Consensus 87 ~~Givt~~dl~~~~~~~~~~~~~~~v~~im~--~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~-g~~~Givt~~dll 163 (270)
-.|.++..+- +.+.+.......+++++|+ ++++++++++++.+|++.|.+++++++||+|++ |+++|+||.+||+
T Consensus 21 ~~g~l~~~e~--~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~ 98 (172)
T 3lhh_A 21 SAGVIEHNEH--AMVKNVFRLDERTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQLL 98 (172)
T ss_dssp ------------------------CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHHHH
T ss_pred HcCCCCHHHH--HHHHHHhccCCCCHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHHHH
Confidence 3456655442 3343334445678999999 678999999999999999999999999999987 9999999999999
Q ss_pred HHHHHHhCCCCCChHHHHHHHHHHHHHHhhccCCCCCCCccccccccccccCCCCccccccCCCCCCCCCCceeEEeecC
Q 024256 164 HAAVATVGNTAGSNNEAASTMMQKFWDSAMALSPNDDEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDN 243 (270)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~di~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~VvD~ 243 (270)
+.... ....++.+. ......+.+ ..+..++...+... .. -..+|+|+
T Consensus 99 ~~~~~---~~~~~v~~i--------m~~~~~v~~----~~~l~~a~~~m~~~----------~~--------~~~pVvd~ 145 (172)
T 3lhh_A 99 SESIA---GERLELVDL--------VKNCNFVPN----SLSGMELLEHFRTT----------GS--------QMVFVVDE 145 (172)
T ss_dssp HHHHT---TCCCCGGGG--------CBCCEEEET----TCCHHHHHHHHHHH----------TC--------SEEEEECT
T ss_pred HHHhh---cCcccHHHH--------hcCCeEeCC----CCCHHHHHHHHHHc----------CC--------eEEEEEeC
Confidence 86321 101111100 000000000 01222222222100 11 13679999
Q ss_pred CCCeeEeecCCCChHHHHHhhhhh
Q 024256 244 KGLMHRFTCGMLPFPNFIEVTNYE 267 (270)
Q Consensus 244 ~g~l~~~~vGivs~~Dil~~i~~~ 267 (270)
+|++ +|+||++|+++++..+
T Consensus 146 ~g~l----vGiit~~Dil~~l~~~ 165 (172)
T 3lhh_A 146 YGDL----KGLVTLQDMMDALTGE 165 (172)
T ss_dssp TSCE----EEEEEHHHHHHHHHTT
T ss_pred CCCE----EEEeeHHHHHHHHhCC
Confidence 9999 9999999999998654
No 74
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.48 E-value=1e-13 Score=104.90 Aligned_cols=122 Identities=14% Similarity=0.106 Sum_probs=82.6
Q ss_pred ccchhhccCC--CCeeecCCCCHHHHHHHhHhCCCCEEEEEeCC-CcEEEEEeHHHHHHHHHHHhCCCCCChHHHHHHHH
Q 024256 109 STLVEKVMTP--NPECATIDTPIVDALHIMHDGKFLHLPVVDRD-GDVVDVVDVIHITHAAVATVGNTAGSNNEAASTMM 185 (270)
Q Consensus 109 ~~~v~~im~~--~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~-g~~~Givt~~dll~~~~~~~~~~~~~~~~~~~~~~ 185 (270)
..+++++|++ +++++++++++.+|++.|.+++++++||+|++ |+++|+||.+|+++..... .....+.+ .+
T Consensus 5 ~~~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~--~~~~~v~~----~m 78 (130)
T 3i8n_A 5 DVPVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQSG--SGQKQLGA----VM 78 (130)
T ss_dssp --CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHTT--TTTSBHHH----HS
T ss_pred cCCHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhcC--CCcCCHHH----Hh
Confidence 4689999995 56689999999999999999999999999987 8999999999999874321 01111111 11
Q ss_pred HHHHHHhhccCCCCCCCccccccccccccCCCCccccccCCCCCCCCCCceeEEeecCCCCeeEeecCCCChHHHHHhhh
Q 024256 186 QKFWDSAMALSPNDDEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNKGLMHRFTCGMLPFPNFIEVTN 265 (270)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~t~~di~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~VvD~~g~l~~~~vGivs~~Dil~~i~ 265 (270)
.....+.+ ..+..++.+.+... .. ...+|+|++|++ +|++|++|+++++.
T Consensus 79 ----~~~~~v~~----~~~l~~~~~~m~~~----------~~--------~~~~Vvd~~g~~----vGivt~~dil~~l~ 128 (130)
T 3i8n_A 79 ----RPIQVVLN----NTALPKVFDQMMTH----------RL--------QLALVVDEYGTV----LGLVTLEDIFEHLV 128 (130)
T ss_dssp ----EECCEEET----TSCHHHHHHHHHHH----------TC--------CEEEEECTTSCE----EEEEEHHHHHHHHH
T ss_pred ----cCCcCcCC----CCcHHHHHHHHHHc----------CC--------eEEEEEcCCCCE----EEEEEHHHHHHHHc
Confidence 11111111 12233333333111 11 137799999999 99999999999886
Q ss_pred h
Q 024256 266 Y 266 (270)
Q Consensus 266 ~ 266 (270)
.
T Consensus 129 g 129 (130)
T 3i8n_A 129 G 129 (130)
T ss_dssp T
T ss_pred C
Confidence 4
No 75
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.47 E-value=1.8e-13 Score=109.07 Aligned_cols=141 Identities=13% Similarity=0.133 Sum_probs=90.8
Q ss_pred EEEEeeHHHHHHHHHhcCCCCCccchhhccCC--CCeeecCCCCHHHHHHHhHhCCCCEEEEEeCC-CcEEEEEeHHHHH
Q 024256 87 PRGILTSKDILMRVISQNLPADSTLVEKVMTP--NPECATIDTPIVDALHIMHDGKFLHLPVVDRD-GDVVDVVDVIHIT 163 (270)
Q Consensus 87 ~~Givt~~dl~~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~-g~~~Givt~~dll 163 (270)
--|.++..+- +.+.+.......+++++|++ +++++++++++.+|++.|.+++++++||+|++ |+++|+||.+||+
T Consensus 15 ~~g~l~~~e~--~~i~~~l~l~~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~ 92 (173)
T 3ocm_A 15 AVPAFGVEER--NMVSGVLTLAERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLV 92 (173)
T ss_dssp ---CCCHHHH--HHHHHHHHHTTSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHHH
T ss_pred hcCCcCHHHH--HHHHHHhccCCCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHHH
Confidence 3478885553 33332223345789999975 68899999999999999999999999999976 8999999999999
Q ss_pred HHHHHHhCCCCCChHHHHHHHHHHHHHHhhccCCCCCCCccccccccccccCCCCccccccCCCCCCCCCCceeEEeecC
Q 024256 164 HAAVATVGNTAGSNNEAASTMMQKFWDSAMALSPNDDEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDN 243 (270)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~di~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~VvD~ 243 (270)
....... ..++. ++ ..+..+. ...+..++...+.. .... ..+|+|+
T Consensus 93 ~~~~~~~---~~~v~-----~~----~~~~~v~----~~~~l~~al~~m~~----------~~~~--------~~~Vvde 138 (173)
T 3ocm_A 93 ADLITEG---RVRRN-----RL----RDPIIVH----ESIGILRLMDTLKR----------SRGQ--------LVLVADE 138 (173)
T ss_dssp HHHHHHS---SCCGG-----GS----BCCCEEC----GGGCHHHHHHHHHH----------STTC--------CEEEECT
T ss_pred HHHhcCC---cchhH-----hc----CCCeEEC----CCCcHHHHHHHHHH----------cCCe--------EEEEEeC
Confidence 8743210 00000 00 0000000 01222333333311 1111 3679999
Q ss_pred CCCeeEeecCCCChHHHHHhhhhh
Q 024256 244 KGLMHRFTCGMLPFPNFIEVTNYE 267 (270)
Q Consensus 244 ~g~l~~~~vGivs~~Dil~~i~~~ 267 (270)
+|++ +||||++||++++..+
T Consensus 139 ~g~l----vGiIT~~Dil~~l~~~ 158 (173)
T 3ocm_A 139 FGAI----EGLVTPIDVFEAIAGE 158 (173)
T ss_dssp TCCE----EEEECHHHHHHHHHCC
T ss_pred CCCE----EEEEeHHHHHHHHhCc
Confidence 9999 9999999999998643
No 76
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.47 E-value=4.5e-14 Score=106.44 Aligned_cols=122 Identities=15% Similarity=0.212 Sum_probs=82.3
Q ss_pred ccchhhccCCC--CeeecCCCCHHHHHHHhHhCCCCEEEEEeCC-CcEEEEEeHHHHHHHHHHHhCCCCCChHHHHHHHH
Q 024256 109 STLVEKVMTPN--PECATIDTPIVDALHIMHDGKFLHLPVVDRD-GDVVDVVDVIHITHAAVATVGNTAGSNNEAASTMM 185 (270)
Q Consensus 109 ~~~v~~im~~~--~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~-g~~~Givt~~dll~~~~~~~~~~~~~~~~~~~~~~ 185 (270)
+.+++++|+++ ++++++++++.+|++.|.+++++++||+|++ |+++|+||.+|+++.... .....++.+. +
T Consensus 2 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~--~~~~~~v~~~----m 75 (127)
T 3nqr_A 2 DQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRS--DAEAFSMDKV----L 75 (127)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGST--TCCCCCHHHH----C
T ss_pred CcCHHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhc--cCCCCCHHHH----c
Confidence 35799999965 8999999999999999999999999999987 899999999999975221 1111111111 1
Q ss_pred HHHHHHhhccCCCCCCCccccccccccccCCCCccccccCCCCCCCCCCceeEEeecCCCCeeEeecCCCChHHHHHhhh
Q 024256 186 QKFWDSAMALSPNDDEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNKGLMHRFTCGMLPFPNFIEVTN 265 (270)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~t~~di~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~VvD~~g~l~~~~vGivs~~Dil~~i~ 265 (270)
.....+. ...+..++.+.+... .. -..+|+|++|++ +|++|++|+++++.
T Consensus 76 ----~~~~~v~----~~~~l~~a~~~m~~~----------~~--------~~lpVvd~~g~~----~Giit~~dll~~l~ 125 (127)
T 3nqr_A 76 ----RTAVVVP----ESKRVDRMLKEFRSQ----------RY--------HMAIVIDEFGGV----SGLVTIEDILELIV 125 (127)
T ss_dssp ----BCCCEEE----TTCBHHHHHHHHHHT----------TC--------CEEEEECTTSCE----EEEEEHHHHHHHC-
T ss_pred ----CCCeEEC----CCCcHHHHHHHHHhc----------CC--------eEEEEEeCCCCE----EEEEEHHHHHHHHh
Confidence 1111111 012233333333111 11 137899999999 99999999999875
Q ss_pred h
Q 024256 266 Y 266 (270)
Q Consensus 266 ~ 266 (270)
.
T Consensus 126 g 126 (127)
T 3nqr_A 126 G 126 (127)
T ss_dssp -
T ss_pred C
Confidence 4
No 77
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.46 E-value=1.6e-13 Score=102.23 Aligned_cols=118 Identities=19% Similarity=0.289 Sum_probs=81.5
Q ss_pred chhhccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHHHHHhCCCCCChHHHHHHHHHHHHH
Q 024256 111 LVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVGNTAGSNNEAASTMMQKFWD 190 (270)
Q Consensus 111 ~v~~im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (270)
+++++|++++.++++++++.+|++.|.+++.+.+||+|++|+++|+||..|+++..... ..+. .
T Consensus 2 ~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~----~~~v------------~ 65 (122)
T 3kpb_A 2 LVKDILSKPPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALAQN----KKTI------------E 65 (122)
T ss_dssp BHHHHCCSCCCCEETTSBHHHHHHHHHHHTCSCEEEECTTSBEEEEECHHHHHHHHHTT----CCBG------------G
T ss_pred chHHhhCCCCEEeCCCCcHHHHHHHHHHcCCCeEEEECCCCCEEEEEEHHHHHHHHHhc----ccCH------------H
Confidence 68999999999999999999999999999999999999899999999999999863221 0001 0
Q ss_pred HhhccCCCC-CCCccccccccccccCCCCccccccCCCCCCCCCCceeEEeecCCCCeeEeecCCCChHHHHHhhhh
Q 024256 191 SAMALSPND-DEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNKGLMHRFTCGMLPFPNFIEVTNY 266 (270)
Q Consensus 191 ~~~~~~~~~-~~~~t~~di~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~VvD~~g~l~~~~vGivs~~Dil~~i~~ 266 (270)
.++.-.... ....+..++.+.+... .. ..++|+|++|++ +|++|.+|+++.+..
T Consensus 66 ~~~~~~~~~v~~~~~l~~~~~~~~~~----------~~--------~~l~Vvd~~g~~----~Givt~~dl~~~l~~ 120 (122)
T 3kpb_A 66 EIMTRNVITAHEDEPVDHVAIKMSKY----------NI--------SGVPVVDDYRRV----VGIVTSEDISRLFGG 120 (122)
T ss_dssp GTSBSSCCCEETTSBHHHHHHHHHHH----------TC--------SEEEEECTTCBE----EEEEEHHHHHHHHC-
T ss_pred HHhcCCCeEECCCCCHHHHHHHHHHh----------CC--------CeEEEECCCCCE----EEEEeHHHHHHHhhc
Confidence 110000000 0012222333222111 11 137899999999 999999999998864
No 78
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.46 E-value=3.8e-13 Score=101.36 Aligned_cols=56 Identities=14% Similarity=0.156 Sum_probs=53.2
Q ss_pred ccchhhccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHH
Q 024256 109 STLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 165 (270)
Q Consensus 109 ~~~v~~im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~ 165 (270)
..+++++|.+++.++++++++.+|++.|.+++.+.+||+|+ |+++|+||.+|+++.
T Consensus 4 s~~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~Givt~~dl~~~ 59 (128)
T 3gby_A 4 SVTFSYLAETDYPVFTLGGSTADAARRLAASGCACAPVLDG-ERYLGMVHLSRLLEG 59 (128)
T ss_dssp TCBGGGGCBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHTT
T ss_pred ceEHHHhhcCCcceECCCCCHHHHHHHHHHCCCcEEEEEEC-CEEEEEEEHHHHHHH
Confidence 46899999999999999999999999999999999999998 999999999999974
No 79
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.46 E-value=1e-13 Score=104.73 Aligned_cols=121 Identities=14% Similarity=0.208 Sum_probs=82.3
Q ss_pred ccchhhccC--CCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCC-CcEEEEEeHHHHHHHHHHHhCCCCCChHHHHHHHH
Q 024256 109 STLVEKVMT--PNPECATIDTPIVDALHIMHDGKFLHLPVVDRD-GDVVDVVDVIHITHAAVATVGNTAGSNNEAASTMM 185 (270)
Q Consensus 109 ~~~v~~im~--~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~-g~~~Givt~~dll~~~~~~~~~~~~~~~~~~~~~~ 185 (270)
+.+++++|+ ++++++++++++.+|++.|.+++++++||+|++ |+++|+||.+|+++... .......+. +
T Consensus 4 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~----~~~~~v~~~----m 75 (129)
T 3jtf_A 4 ERTVADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYML----EPALDIRSL----V 75 (129)
T ss_dssp CCBHHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGT----CTTSCGGGG----C
T ss_pred CCCHHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhc----cCCcCHHHH----h
Confidence 468999999 577899999999999999999999999999975 89999999999997521 111111110 0
Q ss_pred HHHHHHhhccCCCCCCCccccccccccccCCCCccccccCCCCCCCCCCceeEEeecCCCCeeEeecCCCChHHHHHhhh
Q 024256 186 QKFWDSAMALSPNDDEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNKGLMHRFTCGMLPFPNFIEVTN 265 (270)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~t~~di~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~VvD~~g~l~~~~vGivs~~Dil~~i~ 265 (270)
.....+. ...+..++...+... . .-..+|+|++|++ +|++|++|+++++.
T Consensus 76 ----~~~~~v~----~~~~l~~~~~~m~~~----------~--------~~~~pVvd~~g~~----~Giit~~Dil~~l~ 125 (129)
T 3jtf_A 76 ----RPAVFIP----EVKRLNVLLREFRAS----------R--------NHLAIVIDEHGGI----SGLVTMEDVLEQIV 125 (129)
T ss_dssp ----BCCCEEE----TTCBHHHHHHHHHTS----------S--------CCEEEEECC-CCE----EEEEEHHHHHHHHH
T ss_pred ----CCCeEeC----CCCcHHHHHHHHHhc----------C--------CeEEEEEeCCCCE----EEEEEHHHHHHHHh
Confidence 0000000 012233333333111 1 1137799999999 99999999999986
Q ss_pred hh
Q 024256 266 YE 267 (270)
Q Consensus 266 ~~ 267 (270)
.+
T Consensus 126 ge 127 (129)
T 3jtf_A 126 GD 127 (129)
T ss_dssp HT
T ss_pred CC
Confidence 54
No 80
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.45 E-value=1.8e-13 Score=112.09 Aligned_cols=121 Identities=10% Similarity=0.061 Sum_probs=84.4
Q ss_pred CccchhhccCCCCeeecCCCCHHHHHHHhHhC---CCCEEEEEeCCCcEEEEEeHHHHHHHHHHHhCCCCCChHHHHHHH
Q 024256 108 DSTLVEKVMTPNPECATIDTPIVDALHIMHDG---KFLHLPVVDRDGDVVDVVDVIHITHAAVATVGNTAGSNNEAASTM 184 (270)
Q Consensus 108 ~~~~v~~im~~~~~~v~~~~~l~~a~~~~~~~---~~~~lpVvd~~g~~~Givt~~dll~~~~~~~~~~~~~~~~~~~~~ 184 (270)
...+++++|+++++++++++++.+|++.|.+. +++++||+|++|+++|+||.+||+.. .....+
T Consensus 52 ~~~~v~~iM~~~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~------~~~~~v------- 118 (205)
T 3kxr_A 52 SENEIGRYTDHQMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEADKYLGTVRRYDIFKH------EPHEPL------- 118 (205)
T ss_dssp CTTCGGGGCBCCCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTTCBEEEEEEHHHHTTS------CTTSBG-------
T ss_pred CcchHHhhccCceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCCCeEEEEEEHHHHHhC------CCcchH-------
Confidence 35689999999999999999999999999987 78999999999999999999999853 111111
Q ss_pred HHHHHHHhhccCCCC-CCCccccccccccccCCCCccccccCCCCCCCCCCceeEEeecCCCCeeEeecCCCChHHHHHh
Q 024256 185 MQKFWDSAMALSPND-DEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNKGLMHRFTCGMLPFPNFIEV 263 (270)
Q Consensus 185 ~~~~~~~~~~~~~~~-~~~~t~~di~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~VvD~~g~l~~~~vGivs~~Dil~~ 263 (270)
..++.-.... ....+..++.+.+. .+... ..+|+|++|++ +|+||.+|+++.
T Consensus 119 -----~~im~~~~~~v~~~~~l~~a~~~m~----------~~~~~--------~lpVVD~~g~l----vGiIT~~Dil~~ 171 (205)
T 3kxr_A 119 -----ISLLSEDSRALTANTTLLDAAEAIE----------HSREI--------ELPVIDDAGEL----IGRVTLRAATAL 171 (205)
T ss_dssp -----GGGCCSSCCCEETTSCHHHHHHHHH----------TSSCS--------EEEEECTTSBE----EEEEEHHHHHHH
T ss_pred -----HHHhcCCCeEECCCCCHHHHHHHHH----------hcCCC--------EEEEEcCCCeE----EEEEEHHHHHHH
Confidence 1111000000 00122233333331 11111 47899999999 999999999999
Q ss_pred hhhhc
Q 024256 264 TNYEY 268 (270)
Q Consensus 264 i~~~~ 268 (270)
+..++
T Consensus 172 i~~e~ 176 (205)
T 3kxr_A 172 VREHY 176 (205)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 97654
No 81
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.45 E-value=1e-13 Score=105.04 Aligned_cols=124 Identities=13% Similarity=0.097 Sum_probs=83.4
Q ss_pred cchhhccCC--CCeeecCCCCHHHHHHHhHhCCCCEEEEEeC-CCcEEEEEeHHHHHHHHHHHhCCCCCChHHHHHHHHH
Q 024256 110 TLVEKVMTP--NPECATIDTPIVDALHIMHDGKFLHLPVVDR-DGDVVDVVDVIHITHAAVATVGNTAGSNNEAASTMMQ 186 (270)
Q Consensus 110 ~~v~~im~~--~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~-~g~~~Givt~~dll~~~~~~~~~~~~~~~~~~~~~~~ 186 (270)
.+++++|++ +++++++++++.+|++.|.+++++++||+++ +|+++|+||.+|++++... +.... .....
T Consensus 2 ~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~---~~~~~-~~~v~---- 73 (130)
T 3hf7_A 2 VSVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTE---KKEFT-KEIML---- 73 (130)
T ss_dssp CBHHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTS---SSCCC-HHHHH----
T ss_pred cCHHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhc---cCccc-hhhHH----
Confidence 478999975 6889999999999999999999999999975 5899999999999986321 11101 11111
Q ss_pred HHHHHhhccCCCCCCCccccccccccccCCCCccccccCCCCCCCCCCceeEEeecCCCCeeEeecCCCChHHHHHhhhh
Q 024256 187 KFWDSAMALSPNDDEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNKGLMHRFTCGMLPFPNFIEVTNY 266 (270)
Q Consensus 187 ~~~~~~~~~~~~~~~~~t~~di~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~VvD~~g~l~~~~vGivs~~Dil~~i~~ 266 (270)
+.......+.+ ..+..++.+.+.... . -..+|+|++|++ +|++|++|+++++..
T Consensus 74 ~~m~~~~~v~~----~~~l~~~~~~m~~~~----------~--------~~~~Vvd~~g~l----vGiit~~Dil~~l~g 127 (130)
T 3hf7_A 74 RAADEIYFVPE----GTPLSTQLVKFQRNK----------K--------KVGLVVDEYGDI----QGLVTVEDILEEIVG 127 (130)
T ss_dssp HHSBCCCEEET----TCBHHHHHHHHHHHC----------C--------CEEEEECTTSCE----EEEEEHHHHHHHHHC
T ss_pred HhccCCeEeCC----CCcHHHHHHHHHhcC----------C--------eEEEEEcCCCCE----EEEeeHHHHHHHHhC
Confidence 11111111111 123334444442111 1 136799999999 999999999999876
Q ss_pred h
Q 024256 267 E 267 (270)
Q Consensus 267 ~ 267 (270)
+
T Consensus 128 ~ 128 (130)
T 3hf7_A 128 D 128 (130)
T ss_dssp -
T ss_pred C
Confidence 5
No 82
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.43 E-value=8.2e-14 Score=109.36 Aligned_cols=60 Identities=25% Similarity=0.363 Sum_probs=55.5
Q ss_pred ccchhhccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHHHH
Q 024256 109 STLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 168 (270)
Q Consensus 109 ~~~v~~im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~ 168 (270)
..+++++|+++++++++++++.+|++.|.+++++.+||+|++|+++|+||..||++....
T Consensus 4 ~~~v~dim~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~ 63 (160)
T 2o16_A 4 MIKVEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLLAAQES 63 (160)
T ss_dssp CCBGGGTSEESCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred cCcHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHH
Confidence 368999999999999999999999999999999999999988999999999999987543
No 83
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.43 E-value=5.1e-13 Score=103.91 Aligned_cols=122 Identities=16% Similarity=0.191 Sum_probs=82.8
Q ss_pred ccchhhccCC--CCeeecCCCCHHHHHHHhHhCCCCEEEEE-eC-CCcEEEEEeHHHHHHHHHHHhCCCCCChHHHHHHH
Q 024256 109 STLVEKVMTP--NPECATIDTPIVDALHIMHDGKFLHLPVV-DR-DGDVVDVVDVIHITHAAVATVGNTAGSNNEAASTM 184 (270)
Q Consensus 109 ~~~v~~im~~--~~~~v~~~~~l~~a~~~~~~~~~~~lpVv-d~-~g~~~Givt~~dll~~~~~~~~~~~~~~~~~~~~~ 184 (270)
..+++++|++ +++++++++++.+|++.|.+++++++||+ |+ +|+++|+||.+||++...... ..++.+
T Consensus 19 ~~~v~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~~~~---~~~v~~----- 90 (153)
T 3oco_A 19 DKVASDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQARIDD---KAKIST----- 90 (153)
T ss_dssp HCBHHHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHHHHT---TSBGGG-----
T ss_pred CCEeeeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHhcCC---CCcHHH-----
Confidence 4689999997 89999999999999999999999999999 64 489999999999998633211 000000
Q ss_pred HHHHHHHhhccCCCCCCCccccccccccccCCCCccccccCCCCCCCCCCceeEEeecCCCCeeEeecCCCChHHHHHhh
Q 024256 185 MQKFWDSAMALSPNDDEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNKGLMHRFTCGMLPFPNFIEVT 264 (270)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~t~~di~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~VvD~~g~l~~~~vGivs~~Dil~~i 264 (270)
.......+. ...+..++...+. ..... ..+|+|++|++ +|+||++|+++++
T Consensus 91 ---~m~~~~~v~----~~~~l~~~~~~m~----------~~~~~--------~lpVvd~~g~~----vGivt~~dil~~l 141 (153)
T 3oco_A 91 ---IMRDIVSVP----ENMKVPDVMEEMS----------AHRVP--------MAIVIDEYGGT----SGIITDKDVYEEL 141 (153)
T ss_dssp ---TCBCCEEEE----TTSBHHHHHHHHH----------HTTCS--------CEEEECTTSCE----EEEECHHHHHHHH
T ss_pred ---HhCCCeEEC----CCCCHHHHHHHHH----------HcCCc--------EEEEEeCCCCE----EEEeeHHHHHHHH
Confidence 000000000 0122223333331 11112 37899999999 9999999999998
Q ss_pred hhh
Q 024256 265 NYE 267 (270)
Q Consensus 265 ~~~ 267 (270)
..+
T Consensus 142 ~~~ 144 (153)
T 3oco_A 142 FGN 144 (153)
T ss_dssp HC-
T ss_pred hcc
Confidence 654
No 84
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.41 E-value=1.1e-13 Score=105.65 Aligned_cols=57 Identities=16% Similarity=0.169 Sum_probs=52.1
Q ss_pred ccchhhccC--CCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCC-CcEEEEEeHHHHHHH
Q 024256 109 STLVEKVMT--PNPECATIDTPIVDALHIMHDGKFLHLPVVDRD-GDVVDVVDVIHITHA 165 (270)
Q Consensus 109 ~~~v~~im~--~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~-g~~~Givt~~dll~~ 165 (270)
+.+++++|+ ++++++++++++.+|++.|.+++++++||+|++ |+++|+||.+||+++
T Consensus 2 ~~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~ 61 (136)
T 3lfr_A 2 DLQVRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPL 61 (136)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGG
T ss_pred CCChHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHH
Confidence 357999998 568999999999999999999999999999987 899999999999975
No 85
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.41 E-value=1.5e-12 Score=98.56 Aligned_cols=56 Identities=21% Similarity=0.276 Sum_probs=52.8
Q ss_pred ccchhhccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHH
Q 024256 109 STLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 165 (270)
Q Consensus 109 ~~~v~~im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~ 165 (270)
..+++++|++++.++++++++.+|++.|.+++.+.+||+| +|+++|+||..|+++.
T Consensus 3 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~ 58 (133)
T 2ef7_A 3 EEIVKEYMKTQVISVTKDAKLNDIAKVMTEKNIGSVIVVD-GNKPVGIITERDIVKA 58 (133)
T ss_dssp CCBGGGTSBCSCCEEETTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHH
T ss_pred cccHHHhccCCCEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEcHHHHHHH
Confidence 4689999999999999999999999999999999999999 8999999999999875
No 86
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.40 E-value=5.3e-13 Score=104.00 Aligned_cols=59 Identities=15% Similarity=0.152 Sum_probs=53.4
Q ss_pred ccchhhccC--CCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHHH
Q 024256 109 STLVEKVMT--PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 167 (270)
Q Consensus 109 ~~~v~~im~--~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~~ 167 (270)
..+++++|+ .+++++++++++.+|++.|.+++++++||+|++|+++|+||.+||++...
T Consensus 14 ~~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~ 74 (156)
T 3ctu_A 14 LGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQM 74 (156)
T ss_dssp HTTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC-CBEEEEEEHHHHHHHHH
T ss_pred HHHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCCCEEEEEEcHHHHHHHHH
Confidence 357999999 57899999999999999999999999999998899999999999998744
No 87
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.39 E-value=8.5e-13 Score=102.07 Aligned_cols=57 Identities=16% Similarity=0.264 Sum_probs=53.3
Q ss_pred ccchhhccCC--CCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHH
Q 024256 109 STLVEKVMTP--NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 165 (270)
Q Consensus 109 ~~~v~~im~~--~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~ 165 (270)
..+++++|++ +++++++++++.+|++.|.+++++++||+|++|+++|+||.+||++.
T Consensus 14 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~ 72 (150)
T 3lqn_A 14 QIFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPMYKLHGLISTAMILDG 72 (150)
T ss_dssp HCBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHH
T ss_pred cCChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECCCCCEEEEEEHHHHHHH
Confidence 4689999995 58999999999999999999999999999989999999999999986
No 88
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.39 E-value=4.9e-13 Score=99.94 Aligned_cols=121 Identities=17% Similarity=0.182 Sum_probs=81.7
Q ss_pred chhhccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHHHHHhCCCCCChHHHHHHHHHHHHH
Q 024256 111 LVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVGNTAGSNNEAASTMMQKFWD 190 (270)
Q Consensus 111 ~v~~im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (270)
+++++|++++.++++++++.+|++.|.+++.+.+||+| +|+++|+||.+|+++...........+..+. +. .
T Consensus 2 ~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~G~it~~dl~~~~~~~~~~~~~~v~~~----m~---~ 73 (125)
T 1pbj_A 2 RVEDVMVTDVDTIDITASLEDVLRNYVENAKGSSVVVK-EGVRVGIVTTWDVLEAIAEGDDLAEVKVWEV----ME---R 73 (125)
T ss_dssp CHHHHCBCSCCEEETTCBHHHHHHHHHHHCCCEEEEEE-TTEEEEEEEHHHHHHHHHHTCCTTTSBHHHH----CB---C
T ss_pred CHHHhcCCCceEECCCCcHHHHHHHHHHcCCCEEEEEe-CCeeEEEEeHHHHHHHHhcCCcccccCHHHH----cC---C
Confidence 57899999999999999999999999999999999999 8999999999999976432111011111111 00 0
Q ss_pred HhhccCCCCCCCccccccccccccCCCCccccccCCCCCCCCCCceeEEeecCCCCeeEeecCCCChHHHHHhhhh
Q 024256 191 SAMALSPNDDEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNKGLMHRFTCGMLPFPNFIEVTNY 266 (270)
Q Consensus 191 ~~~~~~~~~~~~~t~~di~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~VvD~~g~l~~~~vGivs~~Dil~~i~~ 266 (270)
....+.. ..+..++.+.+.... .. .++|+|+ |++ +|++|.+|+++.+..
T Consensus 74 ~~~~v~~----~~~l~~~~~~~~~~~----------~~--------~l~Vvd~-~~~----~Gvit~~dl~~~l~~ 122 (125)
T 1pbj_A 74 DLVTISP----RATIKEAAEKMVKNV----------VW--------RLLVEED-DEI----IGVISATDILRAKMA 122 (125)
T ss_dssp GGGEECT----TSCHHHHHHHHHHHT----------CS--------EEEEEET-TEE----EEEEEHHHHHHHHC-
T ss_pred CCeEECC----CCCHHHHHHHHHhcC----------Cc--------EEEEEEC-CEE----EEEEEHHHHHHHHHh
Confidence 1111111 122333333331111 11 3789998 999 999999999998854
No 89
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.39 E-value=1.4e-12 Score=99.24 Aligned_cols=58 Identities=21% Similarity=0.196 Sum_probs=54.0
Q ss_pred CccchhhccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHH
Q 024256 108 DSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 165 (270)
Q Consensus 108 ~~~~v~~im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~ 165 (270)
...+++++|+++++++++++++.+|++.|.+++.+.+||+|++|+++|+||..|+++.
T Consensus 5 ~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~ 62 (138)
T 2yzi_A 5 MKAPIKVYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIRR 62 (138)
T ss_dssp TTSBGGGTCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHH
T ss_pred hhhhHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHH
Confidence 3578999999999999999999999999999999999999988999999999999854
No 90
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.39 E-value=2.7e-13 Score=103.24 Aligned_cols=129 Identities=20% Similarity=0.251 Sum_probs=85.3
Q ss_pred ccchhhccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHH-HHHHHHHhCCCCCChHHHHHHHHHH
Q 024256 109 STLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHI-THAAVATVGNTAGSNNEAASTMMQK 187 (270)
Q Consensus 109 ~~~v~~im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dl-l~~~~~~~~~~~~~~~~~~~~~~~~ 187 (270)
..+++++|++++.++++++++.+|++.|.+++.+.+||+|++|+++|+||..|+ ++.+... .....+..+ .+.
T Consensus 7 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~-~~~~~~v~~----~m~- 80 (138)
T 2p9m_A 7 NIKVKDVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGYNLIRDK-YTLETTIGD----VMT- 80 (138)
T ss_dssp TCBGGGTSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHHHHHTTTC-CCSSCBHHH----HSC-
T ss_pred cCCHHHhhcCCceEECCCCcHHHHHHHHHHCCCcEEEEECCCCeEEEEEEHHHHHHHHHhhc-ccCCcCHHH----HhC-
Confidence 468999999999999999999999999999999999999988999999999999 7642110 001111111 000
Q ss_pred HHHHhhccCCCCCCCccccccccccccCCCCccccccCCCCCCCCCCceeEEeecCCCCeeEeecCCCChHHHHHhhhh
Q 024256 188 FWDSAMALSPNDDEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNKGLMHRFTCGMLPFPNFIEVTNY 266 (270)
Q Consensus 188 ~~~~~~~~~~~~~~~~t~~di~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~VvD~~g~l~~~~vGivs~~Dil~~i~~ 266 (270)
.....+. ...+..++.+.+....+. ......++|+|++|++ +|++|.+|+++.+..
T Consensus 81 --~~~~~v~----~~~~l~~~~~~~~~~~~~-------------~~~~~~l~Vvd~~g~~----~Giit~~dll~~~~~ 136 (138)
T 2p9m_A 81 --KDVITIH----EDASILEAIKKMDISGKK-------------EEIINQLPVVDKNNKL----VGIISDGDIIRTISK 136 (138)
T ss_dssp --SSCCCEE----TTSBHHHHHHHHTCC------------------CCCEEEEECTTSBE----EEEEEHHHHHHHHHH
T ss_pred --CCcEEEC----CCCCHHHHHHHHHhcCCc-------------cccccEEEEECCCCeE----EEEEEHHHHHHHHHh
Confidence 0111111 113344444444221100 0001147899999999 999999999998754
No 91
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.37 E-value=1.8e-12 Score=99.24 Aligned_cols=56 Identities=16% Similarity=0.137 Sum_probs=53.2
Q ss_pred cchhhccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCC--cEEEEEeHHHHHHH
Q 024256 110 TLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDG--DVVDVVDVIHITHA 165 (270)
Q Consensus 110 ~~v~~im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g--~~~Givt~~dll~~ 165 (270)
.+++++|++++.++++++++.+|++.|.+++.+.+||+|++| +++|+||.+|+++.
T Consensus 5 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~Givt~~dl~~~ 62 (141)
T 2rih_A 5 IRTSELLKRPPVSLPETATIREVATELAKNRVGLAVLTARDNPKRPVAVVSERDILRA 62 (141)
T ss_dssp CBGGGGCCSCCEEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEEEEHHHHHHH
T ss_pred eEHHHHhcCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCCCcceeEEEEEHHHHHHH
Confidence 589999999999999999999999999999999999999877 99999999999986
No 92
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.37 E-value=1.2e-12 Score=102.10 Aligned_cols=62 Identities=18% Similarity=0.299 Sum_probs=56.3
Q ss_pred CCCCCccchhhccCCCCeeecCCCCHHHHHHHhHhCCCCE-EEEEeCCCcEEEEEeHHHHHHHH
Q 024256 104 NLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLH-LPVVDRDGDVVDVVDVIHITHAA 166 (270)
Q Consensus 104 ~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~~~~~~~~~-lpVvd~~g~~~Givt~~dll~~~ 166 (270)
+......+++++|+++++++++++++.+|++.|.+++.+. +||+|++ +++|+||..||++..
T Consensus 10 ~~~~~~~~v~~im~~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~-~~vGivt~~dl~~~~ 72 (157)
T 1o50_A 10 HHHMKVKDVCKLISLKPTVVEEDTPIEEIVDRILEDPVTRTVYVARDN-KLVGMIPVMHLLKVS 72 (157)
T ss_dssp CTTCBHHHHTTSSCCCCEEECTTCBHHHHHHHHHHSTTCCEEEEEETT-EEEEEEEHHHHHHHH
T ss_pred hhhhccccHhhcccCCCceECCCCCHHHHHHHHHhCCCCccEEEEECC-EEEEEEEHHHHHHHH
Confidence 3445568999999999999999999999999999999999 9999977 999999999999863
No 93
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.37 E-value=3e-14 Score=111.42 Aligned_cols=58 Identities=14% Similarity=0.196 Sum_probs=53.3
Q ss_pred CccchhhccCC--CCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCC-cEEEEEeHHHHHHH
Q 024256 108 DSTLVEKVMTP--NPECATIDTPIVDALHIMHDGKFLHLPVVDRDG-DVVDVVDVIHITHA 165 (270)
Q Consensus 108 ~~~~v~~im~~--~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g-~~~Givt~~dll~~ 165 (270)
...+++++|++ +++++++++++.+|++.|.+++++++||+|+++ +++|+||.+|++++
T Consensus 36 ~~~~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~ 96 (156)
T 3oi8_A 36 SDLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKY 96 (156)
T ss_dssp TTCBGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGG
T ss_pred CCCCHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHH
Confidence 35789999997 789999999999999999999999999999774 99999999999975
No 94
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.37 E-value=9.1e-13 Score=100.87 Aligned_cols=131 Identities=15% Similarity=0.281 Sum_probs=86.1
Q ss_pred ccchhh---ccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHHHHHhC-CCCCChHHHHHHH
Q 024256 109 STLVEK---VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVG-NTAGSNNEAASTM 184 (270)
Q Consensus 109 ~~~v~~---im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~~~~-~~~~~~~~~~~~~ 184 (270)
..++++ +|.++++++++++++.+|++.|.+++.+.+||+|++|+++|+||..|+++....... ....++.+.....
T Consensus 7 ~~~v~~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~ 86 (144)
T 2nyc_A 7 KIPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGGIYNDLSLSVGEALMRR 86 (144)
T ss_dssp GSBGGGSSCCBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHTC----CCSBHHHHHHHC
T ss_pred hcchhhcCCCCCCCceEECCCCcHHHHHHHHHHcCcceeeEEcCCCcEEEEEcHHHHHHHhcccccccCCccHHHHHhcC
Confidence 457788 888899999999999999999999999999999988999999999999986432100 0111222211100
Q ss_pred HHHHHHHhhccCCCCCCCccccccccccccCCCCccccccCCCCCCCCCCceeEEeecCCCCeeEeecCCCChHHHHHhh
Q 024256 185 MQKFWDSAMALSPNDDEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNKGLMHRFTCGMLPFPNFIEVT 264 (270)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~t~~di~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~VvD~~g~l~~~~vGivs~~Dil~~i 264 (270)
.. .+..+..+.. ..+..++...+.... .. .++|+|++|++ +|+||++|+++.+
T Consensus 87 ~~-~~~~~~~v~~----~~~l~~~~~~m~~~~----------~~--------~l~Vvd~~g~~----~Giit~~dil~~l 139 (144)
T 2nyc_A 87 SD-DFEGVYTCTK----NDKLSTIMDNIRKAR----------VH--------RFFVVDDVGRL----VGVLTLSDILKYI 139 (144)
T ss_dssp C-------CEECT----TSBHHHHHHHHHHHT----------CS--------EEEEECTTSBE----EEEEEHHHHHHHH
T ss_pred cc-ccCCCeEECC----CCcHHHHHHHHHHCC----------CC--------EEEEECCCCCE----EEEEEHHHHHHHH
Confidence 00 0001112211 133444444442111 11 37899999999 9999999999988
Q ss_pred hh
Q 024256 265 NY 266 (270)
Q Consensus 265 ~~ 266 (270)
..
T Consensus 140 ~~ 141 (144)
T 2nyc_A 140 LL 141 (144)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 95
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.36 E-value=4.3e-13 Score=104.90 Aligned_cols=57 Identities=14% Similarity=0.249 Sum_probs=54.0
Q ss_pred ccchhhccCC--CCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHH
Q 024256 109 STLVEKVMTP--NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 165 (270)
Q Consensus 109 ~~~v~~im~~--~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~ 165 (270)
..+++++|++ +++++++++++.+|++.|.+++++.+||+|++|+++|+||..||+..
T Consensus 13 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~ 71 (159)
T 1yav_A 13 EATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIMNS 71 (159)
T ss_dssp TCBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEHHHHHHH
T ss_pred HhhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEeEHHHHHHH
Confidence 4789999998 89999999999999999999999999999988999999999999986
No 96
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.36 E-value=7.2e-13 Score=102.31 Aligned_cols=57 Identities=21% Similarity=0.314 Sum_probs=53.2
Q ss_pred ccchhhccCC--CCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHH
Q 024256 109 STLVEKVMTP--NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 165 (270)
Q Consensus 109 ~~~v~~im~~--~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~ 165 (270)
..+++++|++ +++++++++++.+|++.|.+++.+.+||+|++|+++|+||..||+..
T Consensus 4 ~~~v~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~ 62 (152)
T 4gqw_A 4 VYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLAL 62 (152)
T ss_dssp CSBGGGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHTTC
T ss_pred eEEhhhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeCCCeEEEEEEHHHHHHh
Confidence 4689999998 89999999999999999999999999999988999999999999863
No 97
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.35 E-value=6e-13 Score=104.27 Aligned_cols=58 Identities=19% Similarity=0.322 Sum_probs=54.2
Q ss_pred ccchhhccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeC--CCcEEEEEeHHHHHHHH
Q 024256 109 STLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDR--DGDVVDVVDVIHITHAA 166 (270)
Q Consensus 109 ~~~v~~im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~--~g~~~Givt~~dll~~~ 166 (270)
..+++++|+++++++++++++.+|++.|.+++.+.+||+|+ +|+++|+||..||++..
T Consensus 12 ~~~v~dim~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~ 71 (164)
T 2pfi_A 12 HVRVEHFMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQAL 71 (164)
T ss_dssp SCBHHHHCBCCCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHH
T ss_pred CCCHHHHcCCCCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHH
Confidence 57899999999999999999999999999999999999996 68999999999999864
No 98
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.35 E-value=2.1e-13 Score=103.31 Aligned_cols=124 Identities=13% Similarity=0.154 Sum_probs=82.1
Q ss_pred cchhhccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHHHHHhCC-CCCChHHHHHHHHHHH
Q 024256 110 TLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVGN-TAGSNNEAASTMMQKF 188 (270)
Q Consensus 110 ~~v~~im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~~~~~-~~~~~~~~~~~~~~~~ 188 (270)
.+++++|.+++.++++++++.+|++.|.+++.+.+||+|++|+++|+||..|+++..+..-.. ...++.+ .+.
T Consensus 8 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~----~m~-- 81 (133)
T 1y5h_A 8 TTARDIMNAGVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAAGLDPNTATAGE----LAR-- 81 (133)
T ss_dssp CCHHHHSEETCCCEETTSBHHHHHHHHHHHTCSEEEEECGGGBEEEEEEHHHHHHTTGGGTCCTTTSBHHH----HHT--
T ss_pred cCHHHHhcCCceEeCCCCCHHHHHHHHHHhCCCeEEEECCCCeEEEEEeHHHHHHHHHhcCCCccccCHHH----Hhc--
Confidence 589999999999999999999999999999999999998889999999999998532111000 0111111 110
Q ss_pred HHHhhccCCCCCCCccccccccccccCCCCccccccCCCCCCCCCCceeEEeecCCCCeeEeecCCCChHHHHHhhhhh
Q 024256 189 WDSAMALSPNDDEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNKGLMHRFTCGMLPFPNFIEVTNYE 267 (270)
Q Consensus 189 ~~~~~~~~~~~~~~~t~~di~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~VvD~~g~l~~~~vGivs~~Dil~~i~~~ 267 (270)
.....+.. ..+..++.+.+... ... .++|+|+ |++ +|++|++|+++.+..+
T Consensus 82 -~~~~~v~~----~~~l~~~~~~m~~~----------~~~--------~l~Vvd~-g~~----~Giit~~dil~~l~~~ 132 (133)
T 1y5h_A 82 -DSIYYVDA----NASIQEMLNVMEEH----------QVR--------RVPVISE-HRL----VGIVTEADIARHLPEH 132 (133)
T ss_dssp -TCCCCEET----TCCHHHHHHHHHHH----------TCS--------EEEEEET-TEE----EEEEEHHHHHHTCC--
T ss_pred -CCCEEECC----CCCHHHHHHHHHHc----------CCC--------EEEEEEC-CEE----EEEEEHHHHHHHHHhc
Confidence 01111110 12333444433211 111 3789998 999 9999999999988654
No 99
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.34 E-value=4.2e-12 Score=99.34 Aligned_cols=56 Identities=25% Similarity=0.243 Sum_probs=52.2
Q ss_pred ccchhhccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHH
Q 024256 109 STLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 165 (270)
Q Consensus 109 ~~~v~~im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~ 165 (270)
..+++++|++ ++++++++++.+|++.|.+++.+.+||+|++|+++|+||.+||++.
T Consensus 16 ~~~v~~im~~-~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~ 71 (159)
T 3fv6_A 16 KLQVKDFQSI-PVVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLLRA 71 (159)
T ss_dssp TCBGGGSCBC-CCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHH
T ss_pred hCCHHHHcCC-CEEECCCCcHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHH
Confidence 4689999987 5599999999999999999999999999988999999999999986
No 100
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.34 E-value=4.2e-12 Score=98.80 Aligned_cols=57 Identities=14% Similarity=0.251 Sum_probs=53.6
Q ss_pred ccchhhccCC--CCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHH
Q 024256 109 STLVEKVMTP--NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 165 (270)
Q Consensus 109 ~~~v~~im~~--~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~ 165 (270)
..+++++|++ +++++++++++.+|++.|.+++++.+||+|++|+++|+||..|+++.
T Consensus 10 ~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~ 68 (157)
T 2emq_A 10 QMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLISMTMMMDA 68 (157)
T ss_dssp CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTTCCEEEEEEHHHHHHH
T ss_pred hCcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCCCCEEEEeeHHHHHHH
Confidence 4689999987 88999999999999999999999999999988999999999999975
No 101
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.34 E-value=1e-12 Score=110.22 Aligned_cols=59 Identities=19% Similarity=0.256 Sum_probs=55.7
Q ss_pred ccchhhccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHHH
Q 024256 109 STLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 167 (270)
Q Consensus 109 ~~~v~~im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~~ 167 (270)
..+++++|+++++++++++++.+|++.|.+++++++||+|++|+++|+||..|++++..
T Consensus 6 ~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~l~Giit~~di~~~~~ 64 (245)
T 3l2b_A 6 KLKVEDLEMDKIAPLAPEVSLKMAWNIMRDKNLKSIPVADGNNHLLGMLSTSNITATYM 64 (245)
T ss_dssp CCBGGGSCCBCCCCBCTTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHH
T ss_pred cCcHHHhcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHH
Confidence 46899999999999999999999999999999999999998899999999999998754
No 102
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.33 E-value=1.4e-12 Score=103.73 Aligned_cols=56 Identities=30% Similarity=0.385 Sum_probs=52.6
Q ss_pred cchhhccCC--CCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHH
Q 024256 110 TLVEKVMTP--NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 165 (270)
Q Consensus 110 ~~v~~im~~--~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~ 165 (270)
.+++++|++ +++++++++++.+|++.|.+++++.+||+|++|+++|+||.+||++.
T Consensus 4 ~~v~dim~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~ 61 (180)
T 3sl7_A 4 YTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLAL 61 (180)
T ss_dssp CBHHHHSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHTCC
T ss_pred eeHHHhcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECCCCeEEEEEEHHHHHhh
Confidence 578999998 89999999999999999999999999999988999999999999853
No 103
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.33 E-value=7.3e-12 Score=98.57 Aligned_cols=60 Identities=22% Similarity=0.258 Sum_probs=55.0
Q ss_pred CccchhhccCC---CCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHHH
Q 024256 108 DSTLVEKVMTP---NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 167 (270)
Q Consensus 108 ~~~~v~~im~~---~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~~ 167 (270)
...+++++|++ +++++++++++.+|++.|.+++.+.+||+|++|+++|+||.+||++.+.
T Consensus 22 ~~~~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~ 84 (165)
T 3fhm_A 22 MATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAVA 84 (165)
T ss_dssp SSCBHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred hhcCHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEHHHHHHHHH
Confidence 35789999985 6899999999999999999999999999998899999999999998743
No 104
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.31 E-value=5.9e-13 Score=103.06 Aligned_cols=57 Identities=12% Similarity=0.160 Sum_probs=53.8
Q ss_pred cchhhccCC--CCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHH
Q 024256 110 TLVEKVMTP--NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAA 166 (270)
Q Consensus 110 ~~v~~im~~--~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~ 166 (270)
.+++++|++ +++++++++++.+|++.|.+++.+.+||+|++|+++|+||..||++.+
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~ 86 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNIIGIFTDGDLRRVF 86 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTTCBEEEEEEHHHHHHHH
T ss_pred cCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCCCcEEEEecHHHHHHHH
Confidence 489999999 899999999999999999999999999999889999999999999863
No 105
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.30 E-value=4.2e-12 Score=109.13 Aligned_cols=124 Identities=14% Similarity=0.255 Sum_probs=86.3
Q ss_pred CCCccchhhccCCCCeeecCCCCHHHHHHHhHhC-----CCCEEEEEeCCCcEEEEEeHHHHHHHHHHHhCCCCCChHHH
Q 024256 106 PADSTLVEKVMTPNPECATIDTPIVDALHIMHDG-----KFLHLPVVDRDGDVVDVVDVIHITHAAVATVGNTAGSNNEA 180 (270)
Q Consensus 106 ~~~~~~v~~im~~~~~~v~~~~~l~~a~~~~~~~-----~~~~lpVvd~~g~~~Givt~~dll~~~~~~~~~~~~~~~~~ 180 (270)
.....+++++|+++++++++++++.+|++.|.++ +++++||+|++|+++|+||.+|++.. ....++.+
T Consensus 133 ~~~~~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~~~lvGivt~~dll~~------~~~~~v~~- 205 (286)
T 2oux_A 133 HYEDETAGAIMTTEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQENHLVGVISLRDLIVN------DDDTLIAD- 205 (286)
T ss_dssp TSCTTBHHHHCBSCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTTCBEEEEEEHHHHTTS------CTTSBHHH-
T ss_pred cCChHHHHHhCCCCceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCCCeEEEEEEHHHHHcC------CCCCcHHH-
Confidence 4456799999999999999999999999999987 78889999988999999999999863 11111111
Q ss_pred HHHHHHHHHHHhhccCCCCCCCccccccccccccCCCCccccccCCCCCCCCCCceeEEeecCCCCeeEeecCCCChHHH
Q 024256 181 ASTMMQKFWDSAMALSPNDDEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNKGLMHRFTCGMLPFPNF 260 (270)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~t~~di~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~VvD~~g~l~~~~vGivs~~Di 260 (270)
.+. ..+..+. ...+..++.+.+.. +... ..+|+|++|++ +|+||.+|+
T Consensus 206 ---im~---~~~~~v~----~~~~l~ea~~~m~~----------~~~~--------~lpVVd~~g~l----vGiIT~~Di 253 (286)
T 2oux_A 206 ---ILN---ERVISVH----VGDDQEDVAQTIRD----------YDFL--------AVPVTDYDDHL----LGIVTVDDI 253 (286)
T ss_dssp ---HSB---SCCCCEE----TTSBHHHHHHHHHH----------HTCS--------EEEEECTTCBE----EEEEEHHHH
T ss_pred ---HcC---CCCeeec----CCCCHHHHHHHHHH----------cCCc--------EEEEEcCCCeE----EEEEEHHHH
Confidence 000 0010110 01223333333311 1111 37899999999 999999999
Q ss_pred HHhhhhhc
Q 024256 261 IEVTNYEY 268 (270)
Q Consensus 261 l~~i~~~~ 268 (270)
++.+..++
T Consensus 254 l~~i~~e~ 261 (286)
T 2oux_A 254 IDVIDDEA 261 (286)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99987653
No 106
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.28 E-value=1e-11 Score=99.56 Aligned_cols=57 Identities=28% Similarity=0.391 Sum_probs=53.8
Q ss_pred ccchhhccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHH
Q 024256 109 STLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 165 (270)
Q Consensus 109 ~~~v~~im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~ 165 (270)
..+++++|+++++++++++++.+|+++|.+++.+.+||+|++|+++|+||.+||+..
T Consensus 8 ~~~v~~im~~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~g~~vGivt~~dl~~~ 64 (184)
T 1pvm_A 8 FMRVEKIMNSNFKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKR 64 (184)
T ss_dssp CCBGGGTSBTTCCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHH
T ss_pred ccCHHHhcCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHH
Confidence 368999999999999999999999999999999999999988999999999999985
No 107
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.27 E-value=1e-11 Score=106.28 Aligned_cols=120 Identities=18% Similarity=0.286 Sum_probs=80.0
Q ss_pred ccchhhccCCCCeeecCCCCHHHHHHHhHhC-----CCCEEEEEeCCCcEEEEEeHHHHHHHHHHHhCCCCCChHHHHHH
Q 024256 109 STLVEKVMTPNPECATIDTPIVDALHIMHDG-----KFLHLPVVDRDGDVVDVVDVIHITHAAVATVGNTAGSNNEAAST 183 (270)
Q Consensus 109 ~~~v~~im~~~~~~v~~~~~l~~a~~~~~~~-----~~~~lpVvd~~g~~~Givt~~dll~~~~~~~~~~~~~~~~~~~~ 183 (270)
..+++++|+++++++++++++.+|++.|.++ ++.++||+|++|+++|+||.+|++.. ....++.+.
T Consensus 134 ~~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~------~~~~~v~~i--- 204 (278)
T 2yvy_A 134 EDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA------DPRTRVAEI--- 204 (278)
T ss_dssp TTBGGGTCBSCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTTCBEEEEEEHHHHHHS------CTTCBSTTT---
T ss_pred cchHHhhcCCCceEECCCCcHHHHHHHHHHccCCccceeEEEEECCCCCEEEEEEHHHHhcC------CCCCcHHHH---
Confidence 4689999999999999999999999999986 78999999988999999999999863 100000000
Q ss_pred HHHHHHHHhhccCCCCCCCccccccccccccCCCCccccccCCCCCCCCCCceeEEeecCCCCeeEeecCCCChHHHHHh
Q 024256 184 MMQKFWDSAMALSPNDDEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNKGLMHRFTCGMLPFPNFIEV 263 (270)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~t~~di~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~VvD~~g~l~~~~vGivs~~Dil~~ 263 (270)
+. ..+..+. ...+..++.+.+.. +... .++|+|++|++ +|+||.+|+++.
T Consensus 205 -m~---~~~~~v~----~~~~l~~a~~~m~~----------~~~~--------~lpVvd~~g~l----vGivT~~Dil~~ 254 (278)
T 2yvy_A 205 -MN---PKVVYVR----TDTDQEEVARLMAD----------YDFT--------VLPVVDEEGRL----VGIVTVDDVLDV 254 (278)
T ss_dssp -SB---SSCCCEE----TTSBHHHHHHHHHH----------HTCS--------EEEEECTTSBE----EEEEEHHHHHHH
T ss_pred -hC---CCCeEEe----CCCCHHHHHHHHHh----------cCCC--------EEEEEeCCCeE----EEEEEHHHHHHH
Confidence 00 0000000 00122222222210 1111 47899999999 999999999999
Q ss_pred hhhh
Q 024256 264 TNYE 267 (270)
Q Consensus 264 i~~~ 267 (270)
+..+
T Consensus 255 i~~e 258 (278)
T 2yvy_A 255 LEAE 258 (278)
T ss_dssp C---
T ss_pred HHHH
Confidence 8654
No 108
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.27 E-value=2.3e-12 Score=100.01 Aligned_cols=56 Identities=29% Similarity=0.386 Sum_probs=50.4
Q ss_pred ccchhhccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHH
Q 024256 109 STLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAA 166 (270)
Q Consensus 109 ~~~v~~im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~ 166 (270)
..+++++ +++.++++++++.+|++.|.+++.+.+||+|++|+++|+||.+||++..
T Consensus 22 ~~~v~~~--~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~vGivt~~dl~~~~ 77 (152)
T 2uv4_A 22 ELQIGTY--ANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLA 77 (152)
T ss_dssp HHTCSBC--SSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEHHHHHHHH
T ss_pred HccCCcc--CCceEeCCCCcHHHHHHHHHHcCCceEeEECCCCcEEEEEeHHHHHHHh
Confidence 3567777 6788999999999999999999999999999889999999999999863
No 109
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.26 E-value=1.8e-11 Score=92.77 Aligned_cols=54 Identities=15% Similarity=0.221 Sum_probs=51.2
Q ss_pred chhhccC---CCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHH
Q 024256 111 LVEKVMT---PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 165 (270)
Q Consensus 111 ~v~~im~---~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~ 165 (270)
+++++|+ +++.++++++++.+|++.|.+++.+.+||+| +|+++|+||..|+++.
T Consensus 7 ~v~~im~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~ 63 (135)
T 2rc3_A 7 TVKHLLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMK-DEKLVGILTERDFSRK 63 (135)
T ss_dssp BHHHHHHHHCCCCCEECTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHH
T ss_pred eHHHHHhcCCCCcEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEehHHHHHH
Confidence 7999999 8899999999999999999999999999999 8999999999999964
No 110
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.26 E-value=3.7e-11 Score=101.06 Aligned_cols=61 Identities=16% Similarity=0.273 Sum_probs=55.6
Q ss_pred ccchhhccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCC--CcEEEEEeHHHHHHHHHHH
Q 024256 109 STLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRD--GDVVDVVDVIHITHAAVAT 169 (270)
Q Consensus 109 ~~~v~~im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~--g~~~Givt~~dll~~~~~~ 169 (270)
..+++++|+++++++.+++++.+|.++|.+++++.+||||++ ++++|+||++||+.++...
T Consensus 12 ~~~v~diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~~ 74 (250)
T 2d4z_A 12 NIQVGDIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRR 74 (250)
T ss_dssp SCBTTSSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHH
T ss_pred CCChHHhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHHh
Confidence 568999999999999999999999999999999999999964 6899999999999876544
No 111
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.24 E-value=3.3e-11 Score=96.19 Aligned_cols=59 Identities=20% Similarity=0.222 Sum_probs=54.0
Q ss_pred ccchhhccCCC----Ceee--cCCCCHHHHHHHhHhCCCCEEEEE--eCCCcEEEEEeHHHHHHHHH
Q 024256 109 STLVEKVMTPN----PECA--TIDTPIVDALHIMHDGKFLHLPVV--DRDGDVVDVVDVIHITHAAV 167 (270)
Q Consensus 109 ~~~v~~im~~~----~~~v--~~~~~l~~a~~~~~~~~~~~lpVv--d~~g~~~Givt~~dll~~~~ 167 (270)
..+++++|++. ++++ ++++++.+|++.|.+++.+.+||+ |++|+++|+||..|+++...
T Consensus 10 ~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~ 76 (185)
T 2j9l_A 10 KTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIE 76 (185)
T ss_dssp CCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHH
T ss_pred cCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHH
Confidence 46899999986 7888 999999999999999999999999 77899999999999998744
No 112
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.21 E-value=5.6e-12 Score=103.65 Aligned_cols=119 Identities=22% Similarity=0.211 Sum_probs=82.8
Q ss_pred ccchhhccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHHHHHhCCCCCChHHHHHHHHHHH
Q 024256 109 STLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVGNTAGSNNEAASTMMQKF 188 (270)
Q Consensus 109 ~~~v~~im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (270)
...++++|.++++++++++++.+|+++|.+++.+.+||+|++|+++|+||.+|+.+.. ...+
T Consensus 12 ~~~~~~~~~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~l~Givt~~dl~~~~------~~~~------------ 73 (213)
T 1vr9_A 12 HMKVKKWVTQDFPMVEESATVRECLHRMRQYQTNECIVKDREGHFRGVVNKEDLLDLD------LDSS------------ 73 (213)
T ss_dssp -CBGGGGCBSCSCEEETTCBHHHHHHHHHHTTSSEEEEECTTSBEEEEEEGGGGTTSC------TTSB------------
T ss_pred ccCHHHhhcCCCeEECCCCcHHHHHHHHHHCCCCEEEEEcCCCEEEEEEEHHHHHhhc------CCCc------------
Confidence 4578999999999999999999999999999999999999889999999999998641 0000
Q ss_pred HHHhhccCCCC-CCCccccccccccccCCCCccccccCCCCCCCCCCceeEEeecCCCCeeEeecCCCChHHHHHhhhhh
Q 024256 189 WDSAMALSPND-DEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNKGLMHRFTCGMLPFPNFIEVTNYE 267 (270)
Q Consensus 189 ~~~~~~~~~~~-~~~~t~~di~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~VvD~~g~l~~~~vGivs~~Dil~~i~~~ 267 (270)
...++.-.... ....+..++.+.+.... .. .++|+|++|++ +|++|.+|+++.+...
T Consensus 74 v~~im~~~~~~v~~~~~l~~a~~~m~~~~----------~~--------~lpVvd~~g~l----vGiit~~Dil~~~~~~ 131 (213)
T 1vr9_A 74 VFNKVSLPDFFVHEEDNITHALLLFLEHQ----------EP--------YLPVVDEEMRL----KGAVSLHDFLEALIEA 131 (213)
T ss_dssp SGGGCBCTTCCEETTSBHHHHHHHHHHCC----------CS--------EEEEECTTCBE----EEEEEHHHHHHHHHHS
T ss_pred HHHHccCCCEEECCCCcHHHHHHHHHHhC----------CC--------EEEEEcCCCEE----EEEEEHHHHHHHHHHH
Confidence 11111100000 00122333333331111 11 37899999999 9999999999988653
No 113
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=99.21 E-value=4.3e-11 Score=80.20 Aligned_cols=68 Identities=29% Similarity=0.386 Sum_probs=57.6
Q ss_pred eeEECCCCCHHHHHHHHHHCCCcEEEEEeCCEEEEEeeHHHHHHHHHh-cCCCCCccchhhccCCCCeee
Q 024256 55 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVIS-QNLPADSTLVEKVMTPNPECA 123 (270)
Q Consensus 55 ~~~v~~~~tv~~a~~~m~~~~~~~i~Vv~~~~~~Givt~~dl~~~~~~-~~~~~~~~~v~~im~~~~~~v 123 (270)
++++++++++.+|++.|.+++++++||+++|+++|++|.+|++ +.+. .+......+++++|+++++++
T Consensus 2 ~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~~~l~Givt~~dl~-~~~~~~~~~~~~~~v~~im~~~~~~v 70 (70)
T 3fio_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEGDEILGVVTERDIL-DKVVAKGKNPKEVKVEEIMTKNPVKI 70 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEETTEEEEEEEHHHHH-HHTTTTTCCGGGCBGGGTCEECTTCC
T ss_pred CeEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHH-HHHHHcCCCcccCCHHHhcCCCCeEC
Confidence 6789999999999999999999999999999999999999998 5543 333244678999999877653
No 114
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.21 E-value=6.4e-12 Score=97.88 Aligned_cols=123 Identities=17% Similarity=0.211 Sum_probs=80.9
Q ss_pred cchhhccC------CCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHHHHHhCC-CCCChHHHHH
Q 024256 110 TLVEKVMT------PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVGN-TAGSNNEAAS 182 (270)
Q Consensus 110 ~~v~~im~------~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~~~~~-~~~~~~~~~~ 182 (270)
.+++++|+ +++.++++++++.+|++.|.+++++.+||++ +|+++|+||..||++.+...... ...++.+.
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~-- 83 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVD-GDDIAGIVTERDYARKVVLQERSSKATRVEEI-- 83 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEEES-SSSEEEEEEHHHHHHHSGGGTCCSSSCBHHHH--
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEEee-CCEEEEEEEHHHHHHHHHhccCCccccCHHHH--
Confidence 47999998 4459999999999999999999999999965 89999999999999863321111 11111110
Q ss_pred HHHHHHHHHhhccCCCCCCCccccccccccccCCCCccccccCCCCCCCCCCceeEEeecCCCCeeEeecCCCChHHHHH
Q 024256 183 TMMQKFWDSAMALSPNDDEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNKGLMHRFTCGMLPFPNFIE 262 (270)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~t~~di~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~VvD~~g~l~~~~vGivs~~Dil~ 262 (270)
+. ..+..+. ...+..++...+... ... .++|+| +|++ +|+||++||++
T Consensus 84 --m~---~~~~~v~----~~~~l~~~~~~m~~~----------~~~--------~lpVvd-~g~~----~Giit~~dil~ 131 (157)
T 4fry_A 84 --MT---AKVRYVE----PSQSTDECMALMTEH----------RMR--------HLPVLD-GGKL----IGLISIGDLVK 131 (157)
T ss_dssp --SB---SSCCCBC----TTSBHHHHHHHHHHH----------TCS--------EEEEEE-TTEE----EEEEEHHHHHH
T ss_pred --cC---CCCcEEC----CCCcHHHHHHHHHHc----------CCC--------EEEEEE-CCEE----EEEEEHHHHHH
Confidence 00 0011111 012233333333111 111 378999 7999 99999999999
Q ss_pred hhhhh
Q 024256 263 VTNYE 267 (270)
Q Consensus 263 ~i~~~ 267 (270)
.+..+
T Consensus 132 ~l~~~ 136 (157)
T 4fry_A 132 SVIAD 136 (157)
T ss_dssp HHHTT
T ss_pred HHHHH
Confidence 98654
No 115
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.20 E-value=1.1e-11 Score=115.41 Aligned_cols=124 Identities=16% Similarity=0.188 Sum_probs=85.4
Q ss_pred ccchhhccCCCCeeecCC-CCHHHHHHHhHhCCCCEEEEEe-CCCcEEEEEeHHHHHHHHHHHhCCCCCChHHHHHHHHH
Q 024256 109 STLVEKVMTPNPECATID-TPIVDALHIMHDGKFLHLPVVD-RDGDVVDVVDVIHITHAAVATVGNTAGSNNEAASTMMQ 186 (270)
Q Consensus 109 ~~~v~~im~~~~~~v~~~-~~l~~a~~~~~~~~~~~lpVvd-~~g~~~Givt~~dll~~~~~~~~~~~~~~~~~~~~~~~ 186 (270)
..+++++|++++++++++ +++.+|+++|.+++++++||+| ++|+++|+||.+||++.+.........++.+.+.
T Consensus 383 ~~~V~diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~~~~~~~V~~im~---- 458 (527)
T 3pc3_A 383 SLAIAELELPAPPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMNRQQSDPAIKALN---- 458 (527)
T ss_dssp TSBGGGGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHHCCCTTSBGGGGEE----
T ss_pred CCcHHHhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhccCcCCCcHHHHhc----
Confidence 478999999999999999 9999999999999999999999 7899999999999998754321111111111000
Q ss_pred HHHHHhhccCCCCCCCccccccccccccCCCCccccccCCCCCCCCCCceeEEeecC----CCCeeEeecCCCChHHHHH
Q 024256 187 KFWDSAMALSPNDDEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDN----KGLMHRFTCGMLPFPNFIE 262 (270)
Q Consensus 187 ~~~~~~~~~~~~~~~~~t~~di~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~VvD~----~g~l~~~~vGivs~~Dil~ 262 (270)
..+..+. ...+..++.+.+ .... ..+|+|+ +|++ +||||++||++
T Consensus 459 ---~~~~~v~----~~~~l~~a~~~m-------------------~~~~-~~pVVd~~~~~~g~l----vGIVT~~Dll~ 507 (527)
T 3pc3_A 459 ---KRVIRLN----ESEILGKLARVL-------------------EVDP-SVLILGKNPAGKVEL----KALATKLDVTT 507 (527)
T ss_dssp ---TTCCEEE----TTSBHHHHHHHH-------------------TTCS-EEEEEEECSSSCEEE----EEEEEHHHHHH
T ss_pred ---CCCeEEC----CCCcHHHHHHHH-------------------hhCC-EEEEEeCCcccCCeE----EEEEEHHHHHH
Confidence 0000110 012233333333 1111 2579998 4999 99999999999
Q ss_pred hhhhh
Q 024256 263 VTNYE 267 (270)
Q Consensus 263 ~i~~~ 267 (270)
.+...
T Consensus 508 ~l~~~ 512 (527)
T 3pc3_A 508 FIAAG 512 (527)
T ss_dssp HHHTC
T ss_pred HHHhc
Confidence 98653
No 116
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.15 E-value=5.4e-11 Score=109.12 Aligned_cols=121 Identities=17% Similarity=0.291 Sum_probs=82.6
Q ss_pred CccchhhccCCCCeeecCCCCHHHHHHHhHhC-----CCCEEEEEeCCCcEEEEEeHHHHHHHHHHHhCCCCCChHHHHH
Q 024256 108 DSTLVEKVMTPNPECATIDTPIVDALHIMHDG-----KFLHLPVVDRDGDVVDVVDVIHITHAAVATVGNTAGSNNEAAS 182 (270)
Q Consensus 108 ~~~~v~~im~~~~~~v~~~~~l~~a~~~~~~~-----~~~~lpVvd~~g~~~Givt~~dll~~~~~~~~~~~~~~~~~~~ 182 (270)
...+++++|+++++++++++++.++++.|.++ +++++||+|++++++|+||.+|++.. ....++.+.
T Consensus 153 ~~~~v~~iM~~~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~~~lvGiVt~~Dll~~------~~~~~v~di-- 224 (473)
T 2zy9_A 153 EEDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA------DPRTRVAEI-- 224 (473)
T ss_dssp CTTBSTTTCBSCEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTTSBEEEEEEHHHHHHS------CTTSBGGGT--
T ss_pred CCCCHHHhCCCCceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCCCcEEEEEEHHHHhcC------CCCCcHHHH--
Confidence 45789999999999999999999999999986 47899999988999999999999863 111111110
Q ss_pred HHHHHHHHHhhccCCCCCCCccccccccccccCCCCccccccCCCCCCCCCCceeEEeecCCCCeeEeecCCCChHHHHH
Q 024256 183 TMMQKFWDSAMALSPNDDEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNKGLMHRFTCGMLPFPNFIE 262 (270)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~t~~di~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~VvD~~g~l~~~~vGivs~~Dil~ 262 (270)
+. ..+..+. ...+..++.+.+.. +... ..+|+|++|++ +|+||.+|+++
T Consensus 225 --m~---~~~~~v~----~~~~l~ea~~~m~~----------~~~~--------~lpVVDe~g~l----vGiIT~~Dil~ 273 (473)
T 2zy9_A 225 --MN---PKVVYVR----TDTDQEEVARLMAD----------YDFT--------VLPVVDEEGRL----VGIVTVDDVLD 273 (473)
T ss_dssp --SB---SSCCCEE----SSSBHHHHHHHHHH----------HTCS--------EEEEECTTSBE----EEEEEHHHHHH
T ss_pred --hC---CCCeEEe----CCCcHHHHHHHHHh----------cCCc--------EEEEEcCCCEE----EEEEehHhhHH
Confidence 00 0000000 01222233333311 1111 47899999999 99999999999
Q ss_pred hhhhh
Q 024256 263 VTNYE 267 (270)
Q Consensus 263 ~i~~~ 267 (270)
.+..+
T Consensus 274 ~i~~e 278 (473)
T 2zy9_A 274 VLEAE 278 (473)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98654
No 117
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=98.98 E-value=1.1e-10 Score=107.34 Aligned_cols=121 Identities=15% Similarity=0.225 Sum_probs=72.9
Q ss_pred cchhhccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHHHHHhCCCCCChHHHHHHHHHHHH
Q 024256 110 TLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVGNTAGSNNEAASTMMQKFW 189 (270)
Q Consensus 110 ~~v~~im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (270)
.++.++|+++++++++++++.+++++|.+++++.+||+|++++++|+||.+||... .....++.+.+.+ .
T Consensus 89 k~~~~~m~~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~~~-----~~~~~~v~diM~p-----~ 158 (496)
T 4fxs_A 89 KIFEAGVVTHPVTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVRFV-----TDLTKSVAAVMTP-----K 158 (496)
T ss_dssp HHCCC--CBCCCCBCSSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEEEHHHHTTC-----CCTTSBGGGTSEE-----G
T ss_pred cccccccccCceEECCCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEEEHHHHhhc-----ccCCCcHHHHhcC-----C
Confidence 45678899999999999999999999999999999999988999999999999731 1111111110000 0
Q ss_pred HHhhccCCCCCCCccccccccccccCCCCccccccCCCCCCCCCCceeEEeecCCCCeeEeecCCCChHHHHHhhhh
Q 024256 190 DSAMALSPNDDEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNKGLMHRFTCGMLPFPNFIEVTNY 266 (270)
Q Consensus 190 ~~~~~~~~~~~~~~t~~di~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~VvD~~g~l~~~~vGivs~~Dil~~i~~ 266 (270)
+.+..+. ...+..++.+.+... ... ..+|+|++|++ +|+||++|+++...+
T Consensus 159 ~~~vtv~----~~~~l~ea~~~m~~~----------~i~--------~lpVVDe~G~l----~GiIT~~DIl~~~~~ 209 (496)
T 4fxs_A 159 ERLATVK----EGATGAEVQEKMHKA----------RVE--------KILVVNDEFQL----KGMITAKDFHKAESK 209 (496)
T ss_dssp GGCCEEE----CC----CGGGTCC-------------CC--------CEEEECTTSBC----CEEECCC-----CCC
T ss_pred CCCEEEC----CCCCHHHHHHHHHHc----------CCC--------EEEEEcCCCCE----EEeehHhHHHHhhcc
Confidence 0011111 012233333333111 111 37899999999 999999999998754
No 118
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=98.97 E-value=5.6e-11 Score=112.75 Aligned_cols=57 Identities=16% Similarity=0.182 Sum_probs=53.7
Q ss_pred ccchhhccC--CCCeeecCCCCHHHHHHHhH-hCCCCEEEEEeCCCcEEEEEeHHHHHHH
Q 024256 109 STLVEKVMT--PNPECATIDTPIVDALHIMH-DGKFLHLPVVDRDGDVVDVVDVIHITHA 165 (270)
Q Consensus 109 ~~~v~~im~--~~~~~v~~~~~l~~a~~~~~-~~~~~~lpVvd~~g~~~Givt~~dll~~ 165 (270)
..+++++|+ +++.++++++++.++.+.|. +++.+.+||+|++|+++|+||.+|+++.
T Consensus 452 ~~~V~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~~~lvGiVt~~DL~~~ 511 (632)
T 3org_A 452 EMTAREIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDANGYLLGAISRKEIVDR 511 (632)
T ss_dssp TSBHHHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTTCBBCCEESHHHHTTT
T ss_pred cCcHHHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEecCCeEEEEEEHHHHHHH
Confidence 578999999 78999999999999999999 7999999999988999999999999975
No 119
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=98.90 E-value=4.6e-10 Score=103.73 Aligned_cols=119 Identities=17% Similarity=0.271 Sum_probs=80.2
Q ss_pred chhhccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeC--CCcEEEEEeHHHHHHHHHHHhCCCCCChHHHHHHHHHHH
Q 024256 111 LVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDR--DGDVVDVVDVIHITHAAVATVGNTAGSNNEAASTMMQKF 188 (270)
Q Consensus 111 ~v~~im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~--~g~~~Givt~~dll~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (270)
...+.|.++++++++++++.+++++|.+++++.+||+|+ +++++|+||.+|+... .....++.+ .+..
T Consensus 114 ~~~~~m~~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~~~-----~~~~~~V~~----vM~~- 183 (511)
T 3usb_A 114 RSESGVISDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMRFI-----QDYSIKISD----VMTK- 183 (511)
T ss_dssp TSSSCSSSSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHTTC-----CCSSSBHHH----HCCC-
T ss_pred ccccccccCCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhhhh-----ccCCCcHHH----hccc-
Confidence 345678888999999999999999999999999999998 8999999999999741 111111111 0100
Q ss_pred HHHhhccCCCCCCCccccccccccccCCCCccccccCCCCCCCCCCceeEEeecCCCCeeEeecCCCChHHHHHhhhh
Q 024256 189 WDSAMALSPNDDEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNKGLMHRFTCGMLPFPNFIEVTNY 266 (270)
Q Consensus 189 ~~~~~~~~~~~~~~~t~~di~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~VvD~~g~l~~~~vGivs~~Dil~~i~~ 266 (270)
..+..+. ...+..++.+.+..... . .++|+|++|++ +|++|++|+++.+.+
T Consensus 184 -~~~vtv~----~~~~l~eal~~m~~~~i----------~--------~lpVVDe~g~l----~GiIT~~Dil~~~~~ 234 (511)
T 3usb_A 184 -EQLITAP----VGTTLSEAEKILQKYKI----------E--------KLPLVDNNGVL----QGLITIKDIEKVIEF 234 (511)
T ss_dssp -CCCCCEE----TTCCHHHHHHHHHHHTC----------S--------EEEEECTTSBE----EEEEEHHHHHHHHHC
T ss_pred -CCCEEEC----CCCCHHHHHHHHHHcCC----------C--------EEEEEeCCCCE----eeeccHHHHHHhhhc
Confidence 0010000 01233333333321111 1 37899999999 999999999999865
No 120
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=98.88 E-value=2e-10 Score=105.96 Aligned_cols=121 Identities=16% Similarity=0.259 Sum_probs=7.5
Q ss_pred chhhccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHHHHHhCCCCCChHHHHHHHHHHHHH
Q 024256 111 LVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVGNTAGSNNEAASTMMQKFWD 190 (270)
Q Consensus 111 ~v~~im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (270)
.+.++|+++++++++++++.++++.|.+++++.+||+|++|+++|+||.+|+... .....++.+ .+.. .+
T Consensus 96 ~~~~iM~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~lvGivt~~Dl~~~-----~~~~~~v~~----im~~-~~ 165 (494)
T 1vrd_A 96 KTENGIIYDPITVTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDVRFE-----KNLSKKIKD----LMTP-RE 165 (494)
T ss_dssp TC------------------------------------------------------------------------------
T ss_pred hHhhcCccCCeEECCCCCHHHHHHHHHHcCceEEEEEcCCCEEEEEEEHHHHHhh-----cCCCCcHHH----HhCC-CC
Confidence 4678899999999999999999999999999999999988999999999999863 111111111 1110 00
Q ss_pred HhhccCCCCCCCccccccccccccCCCCccccccCCCCCCCCCCceeEEeecCCCCeeEeecCCCChHHHHHhhhhh
Q 024256 191 SAMALSPNDDEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNKGLMHRFTCGMLPFPNFIEVTNYE 267 (270)
Q Consensus 191 ~~~~~~~~~~~~~t~~di~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~VvD~~g~l~~~~vGivs~~Dil~~i~~~ 267 (270)
.+..+.. ..+..++.+.+.... . ..++|+|++|++ +|++|++|+++.+...
T Consensus 166 ~~~~v~~----~~~l~ea~~~m~~~~----------~--------~~lpVVd~~g~l----vGiIt~~Dll~~~~~~ 216 (494)
T 1vrd_A 166 KLIVAPP----DISLEKAKEILHQHR----------I--------EKLPLVSKDNKL----VGLITIKDIMSVIEHP 216 (494)
T ss_dssp ---------------------------------------------------------------------CHHHHTCT
T ss_pred CCeEECC----CCCHHHHHHHHHHcC----------C--------cEEEEEcCCCeE----EEEEEHHHHHhhhccc
Confidence 1111111 122333333331111 1 136799999999 9999999999998654
No 121
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=98.85 E-value=2.6e-10 Score=104.85 Aligned_cols=120 Identities=19% Similarity=0.274 Sum_probs=3.8
Q ss_pred cchhhccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHHHHHhCCCCCChHHHHHHHHHHHH
Q 024256 110 TLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVGNTAGSNNEAASTMMQKFW 189 (270)
Q Consensus 110 ~~v~~im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (270)
..++++|.++++++++++++.+++++|.+++++.+||+| +++++|+||.+||... .....++.+...+ .
T Consensus 88 k~~~~~m~~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd-~g~lvGIVt~rDl~~~-----~~~~~~V~~vMtp---~-- 156 (490)
T 4avf_A 88 KKHETAIVRDPVTVTPSTKIIELLQMAREYGFSGFPVVE-QGELVGIVTGRDLRVK-----PNAGDTVAAIMTP---K-- 156 (490)
T ss_dssp HHCCC---------------------------------------------------------------------------
T ss_pred cccccCcccCceEeCCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEhHHhhhc-----cccCCcHHHHhcc---C--
Confidence 457788999999999999999999999999999999999 8999999999999642 1111111111110 0
Q ss_pred HHhhccCCCCCCCccccccccccccCCCCccccccCCCCCCCCCCceeEEeecCCCCeeEeecCCCChHHHHHhhhh
Q 024256 190 DSAMALSPNDDEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNKGLMHRFTCGMLPFPNFIEVTNY 266 (270)
Q Consensus 190 ~~~~~~~~~~~~~~t~~di~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~VvD~~g~l~~~~vGivs~~Dil~~i~~ 266 (270)
+.+..+.+ ..+..++.+.+..... -..+|+|++|++ +|+||++|+++...+
T Consensus 157 ~~~vtv~~----~~~l~ea~~~m~~~~i------------------~~lpVVDe~g~l----vGiIT~~Dil~~~~~ 207 (490)
T 4avf_A 157 DKLVTARE----GTPLEEMKAKLYENRI------------------EKMLVVDENFYL----RGLVTFRDIEKAKTY 207 (490)
T ss_dssp ----------------------------------------------------------------------------C
T ss_pred CCCEEECC----CCcHHHHHHHHHHcCC------------------CEEEEEcCCCcE----EEEEehHHhhhhccC
Confidence 01111111 1233344444421111 136799999999 999999999998754
No 122
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=98.82 E-value=4.4e-10 Score=103.80 Aligned_cols=119 Identities=14% Similarity=0.127 Sum_probs=1.3
Q ss_pred hhc-cCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCC---CcEEEEEeHHHHHHHHHHHhCCCCCChHHHHHHHHHHH
Q 024256 113 EKV-MTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRD---GDVVDVVDVIHITHAAVATVGNTAGSNNEAASTMMQKF 188 (270)
Q Consensus 113 ~~i-m~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~---g~~~Givt~~dll~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (270)
.++ |+++++++++++++.+++++|.+++++.+||+|++ |+++|+||.+|++.. ......++.+ .+...
T Consensus 99 ~e~gM~~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g~lvGiVt~~Dl~~~----~~~~~~~V~d----iM~~~ 170 (503)
T 1me8_A 99 FKAGFVVSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGLVTQRDYPID----LTQTETKVSD----MMTPF 170 (503)
T ss_dssp TTC-----------------------------------------------------------------------------
T ss_pred cccCcccCCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCCeEEEEEEHHHHHhh----hccccCcHHH----HhCCC
Confidence 344 99999999999999999999999999999999976 899999999999863 0011111111 11100
Q ss_pred HHHhhccCCCCCCCccccccccccccCCCCccccccCCCCCCCCCCceeEEeecCCCCeeEeecCCCChHHHHHhhhh
Q 024256 189 WDSAMALSPNDDEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNKGLMHRFTCGMLPFPNFIEVTNY 266 (270)
Q Consensus 189 ~~~~~~~~~~~~~~~t~~di~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~VvD~~g~l~~~~vGivs~~Dil~~i~~ 266 (270)
+.+..+.+ ..+..++.+.+..... -.++|+|++|++ +|+||++||++.+..
T Consensus 171 -~~~~tv~~----~~sl~ea~~~m~~~~i------------------~~lpVVDe~g~l----vGiIT~~Dil~~~~~ 221 (503)
T 1me8_A 171 -SKLVTAHQ----DTKLSEANKIIWEKKL------------------NALPIIDDDQHL----RYIVFRKDYDRSQVC 221 (503)
T ss_dssp ------------------------------------------------------------------------------
T ss_pred -CCCEEEcC----CCcHHHHHHHHHHcCC------------------CEEEEEcCCCeE----EEEEEecHHHHhhhc
Confidence 00111111 1233444444421111 136799999999 999999999998854
No 123
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=98.82 E-value=1.2e-08 Score=94.07 Aligned_cols=54 Identities=15% Similarity=0.249 Sum_probs=50.9
Q ss_pred chhhccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEe--CCCcEEEEEeHHHHHH
Q 024256 111 LVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD--RDGDVVDVVDVIHITH 164 (270)
Q Consensus 111 ~v~~im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd--~~g~~~Givt~~dll~ 164 (270)
.+.++|+++++++++++++.++++.|.+++++.+||+| ++++++|+||.+|++.
T Consensus 91 ~~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~~ 146 (491)
T 1zfj_A 91 RSENGVIIDPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRF 146 (491)
T ss_dssp HHTTTTSSSCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHHH
T ss_pred hHHhcCcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHhh
Confidence 46789999999999999999999999999999999999 7899999999999985
No 124
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.81 E-value=1.3e-08 Score=68.20 Aligned_cols=45 Identities=13% Similarity=0.123 Sum_probs=42.5
Q ss_pred CeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHH
Q 024256 120 PECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 165 (270)
Q Consensus 120 ~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~ 165 (270)
++++++++++.+|+++|.+++++.+||+| +|+++|++|.+||++.
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d-~~~lvGIvT~~Di~~~ 46 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVME-GDEILGVVTERDILDK 46 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHH
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHH
Confidence 57899999999999999999999999998 6899999999999976
No 125
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.66 E-value=7.1e-08 Score=64.11 Aligned_cols=46 Identities=13% Similarity=0.118 Sum_probs=43.1
Q ss_pred CCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHH
Q 024256 119 NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 165 (270)
Q Consensus 119 ~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~ 165 (270)
+++++++++++.+|++.|.+++++.+||+|+ |+++|+||.+|++++
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~-~~l~Givt~~dl~~~ 46 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEG-DEILGVVTERDILDK 46 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHHHHHH
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHH
Confidence 3578999999999999999999999999996 999999999999986
No 126
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=98.59 E-value=5.1e-09 Score=95.23 Aligned_cols=114 Identities=14% Similarity=0.268 Sum_probs=0.8
Q ss_pred hccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeC---CCcEEEEEeHHHHHHHHHHHhCCCCCChHHHHHHHHHHHHH
Q 024256 114 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDR---DGDVVDVVDVIHITHAAVATVGNTAGSNNEAASTMMQKFWD 190 (270)
Q Consensus 114 ~im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~---~g~~~Givt~~dll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (270)
..|..+|+++.|+.++.+++++|.+++++.+||+++ +|+++||||.+|+-.. +....+.+ .+..
T Consensus 142 ~g~i~dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~------d~~~~V~e----vMT~--- 208 (556)
T 4af0_A 142 NGFITDPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQ------DAETPIKS----VMTT--- 208 (556)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred cCccCCCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEeccccccc------ccceEhhh----hccc---
Confidence 345678999999999999999999999999999985 5799999999997542 21222222 2211
Q ss_pred HhhccCCCCCCCccccccccccccCCCCccccccCCCCCCCCCCceeEEeecCCCCeeEeecCCCChHHHHHhhhh
Q 024256 191 SAMALSPNDDEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNKGLMHRFTCGMLPFPNFIEVTNY 266 (270)
Q Consensus 191 ~~~~~~~~~~~~~t~~di~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~VvD~~g~l~~~~vGivs~~Dil~~i~~ 266 (270)
.++... ...+..+..+++....-. .++|||++|+| +|+||+.|+++.-.+
T Consensus 209 ~lvt~~----~~~~leeA~~iL~~~kie------------------klpVVd~~g~L----vGlIT~kDi~k~~~~ 258 (556)
T 4af0_A 209 EVVTGS----SPITLEKANSLLRETKKG------------------KLPIVDSNGHL----VSLVARSDLLKNQNY 258 (556)
T ss_dssp ---------------------------------------------------------------------------C
T ss_pred ceEEec----CCCCHHHHHHHHHHcccc------------------ceeEEccCCcE----EEEEEechhhhhhhC
Confidence 121111 113444444444222211 26799999999 999999999987653
No 127
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=98.58 E-value=1.2e-09 Score=101.20 Aligned_cols=67 Identities=15% Similarity=0.202 Sum_probs=34.6
Q ss_pred eHHHHHHHHHhcCCCCCccchhhccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeC---CCcEEEEEeHHHHHH
Q 024256 92 TSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDR---DGDVVDVVDVIHITH 164 (270)
Q Consensus 92 t~~dl~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~---~g~~~Givt~~dll~ 164 (270)
+..++. ..+.. -..+.++|.++++++++++++.+++++|.+++++.+||+|+ +|+++|+||.+|+..
T Consensus 96 t~e~~~-~~v~~-----v~~~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~ 165 (514)
T 1jcn_A 96 TPEFQA-NEVRK-----VKNFEQGFITDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDF 165 (514)
T ss_dssp CHHHHH-HHHHH-----HHTCCTTSCSSCCCCCC-----------------CEESCC--------CCEECTTTTC-
T ss_pred CHHHHH-HHHHh-----hhhhhhccccCCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHh
Confidence 666664 33321 23577899999999999999999999999999999999997 589999999999876
No 128
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=98.44 E-value=2.2e-08 Score=92.14 Aligned_cols=114 Identities=18% Similarity=0.282 Sum_probs=1.9
Q ss_pred hhhccCCCCeeecCCCCHHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHHHHHHHHhCCCCCChHHHHHHHHHHHHHH
Q 024256 112 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVGNTAGSNNEAASTMMQKFWDS 191 (270)
Q Consensus 112 v~~im~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (270)
..+.|..+++++++++++.++++.|.+++.+.+||+|+ ++++|+||.+|++. .....+.+ .+.. .
T Consensus 95 ~~~~m~~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~-~~lvGivt~~Dl~~-------~~~~~v~~----im~~---~ 159 (486)
T 2cu0_A 95 AERLIVEDVITIAPDETVDFALFLMEKHGIDGLPVVED-EKVVGIITKKDIAA-------REGKLVKE----LMTK---E 159 (486)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred hhhccccCceEECCCCCHHHHHHHHHHcCCcEEEEEEC-CEEEEEEEHHHhcc-------CCCCCHHH----HccC---C
Confidence 35578889999999999999999999999999999997 99999999999974 11111111 1110 1
Q ss_pred hhccCCCCCCCccccccccccccCCCCccccccCCCCCCCCCCceeEEeecCCCCeeEeecCCCChHHHHHhhhh
Q 024256 192 AMALSPNDDEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNKGLMHRFTCGMLPFPNFIEVTNY 266 (270)
Q Consensus 192 ~~~~~~~~~~~~t~~di~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~VvD~~g~l~~~~vGivs~~Dil~~i~~ 266 (270)
...+.+ ..+..+..+.+.... . ...+|+|++|++ +|++|.+||++.+++
T Consensus 160 ~~~v~~----~~~l~eal~~m~~~~----------~--------~~lpVVde~g~l----vGiiT~~Dil~~~~~ 208 (486)
T 2cu0_A 160 VITVPE----SIEVEEALKIMIENR----------I--------DRLPVVDERGKL----VGLITMSDLVARKKY 208 (486)
T ss_dssp -------------------------------------------------------------------------CC
T ss_pred CeEECC----cCcHHHHHHHHHHcC----------C--------CEEEEEecCCeE----EEEEEHHHHHHhhhc
Confidence 111111 122333333331111 1 136799999999 999999999998763
No 129
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=58.23 E-value=5 Score=26.61 Aligned_cols=25 Identities=16% Similarity=0.262 Sum_probs=21.9
Q ss_pred EEeecCCCCeeEeecCCCChHHHHHhhhh
Q 024256 238 FKVQDNKGLMHRFTCGMLPFPNFIEVTNY 266 (270)
Q Consensus 238 ~~VvD~~g~l~~~~vGivs~~Dil~~i~~ 266 (270)
.+++|++|.. +|+++.+|.++.-+.
T Consensus 16 Vrli~~~Ge~----lGv~~~~eAl~~A~e 40 (78)
T 1tif_A 16 VRLIDQNGDQ----LGIKSKQEALEIAAR 40 (78)
T ss_dssp EEEECTTSCE----EEEEEHHHHHHHHHH
T ss_pred EEEECCCCcC----CCcccHHHHHHHHHH
Confidence 6699999999 999999999887544
No 130
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=47.91 E-value=36 Score=22.42 Aligned_cols=25 Identities=12% Similarity=0.242 Sum_probs=21.6
Q ss_pred CCEEEEEeCCCcEEEEEeHHHHHHH
Q 024256 141 FLHLPVVDRDGDVVDVVDVIHITHA 165 (270)
Q Consensus 141 ~~~lpVvd~~g~~~Givt~~dll~~ 165 (270)
...+=+++++|..+|+++..+-++.
T Consensus 13 ~~eVrli~~~Ge~lGv~~~~eAl~~ 37 (78)
T 1tif_A 13 AREVRLIDQNGDQLGIKSKQEALEI 37 (78)
T ss_dssp CSEEEEECTTSCEEEEEEHHHHHHH
T ss_pred CCEEEEECCCCcCCCcccHHHHHHH
Confidence 4567799999999999999998874
No 131
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=35.16 E-value=7.9 Score=34.14 Aligned_cols=25 Identities=32% Similarity=0.345 Sum_probs=22.7
Q ss_pred ChhhhhhhHHHHHHHhhhHHhhCCCCCChh
Q 024256 1 MERAAEKGKAIAAAVEGVEKHWGTSISGPN 30 (270)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 30 (270)
|+++++.++++++++.| |+|++|.+
T Consensus 50 M~~Vs~~~lA~Ava~aG-----GlGvi~~~ 74 (400)
T 3ffs_A 50 MDTVTEHLMAVGMARLG-----GIGIIHKN 74 (400)
T ss_dssp CTTTCSSHHHHHHHTTT-----CEEEECSS
T ss_pred CCCcCcHHHHHHHHHCC-----CEEEeCCC
Confidence 88899999999999999 99988865
No 132
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=34.47 E-value=29 Score=24.72 Aligned_cols=26 Identities=8% Similarity=-0.125 Sum_probs=17.6
Q ss_pred CHHHHHHHHH-HCCCcEEEEEe-CCEEE
Q 024256 63 TVLMATKKML-ELRLSSAVVTV-ENKPR 88 (270)
Q Consensus 63 tv~~a~~~m~-~~~~~~i~Vv~-~~~~~ 88 (270)
.+...++.+. ..+...+.|.| +|..+
T Consensus 36 ~l~~~~~~~~~~~~~~~i~v~d~~G~~~ 63 (131)
T 1p0z_A 36 RIKALIDPMRSFSDATYITVGDASGQRL 63 (131)
T ss_dssp HHHHHHHHHHHHSCCSEEEEEETTSBEE
T ss_pred HHHHHHHHHHHhcCCCEEEEEcCCCcEE
Confidence 4566666555 46888888999 77543
No 133
>3by8_A Sensor protein DCUS; histidine kinase sensor domain, inner membrane, membrane, phosphoprotein, transferase, transmembrane; 1.45A {Escherichia coli} SCOP: d.110.6.1 PDB: 1ojg_A
Probab=33.62 E-value=29 Score=25.16 Aligned_cols=89 Identities=13% Similarity=0.093 Sum_probs=45.1
Q ss_pred CCHHHHHHHHHH-CCCcEEEEEe-CCEEEEEeeHHHHHHHHHhcCCCCCccchhhccCCCCeeecCCCCHHHHHHHhHhC
Q 024256 62 DTVLMATKKMLE-LRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDG 139 (270)
Q Consensus 62 ~tv~~a~~~m~~-~~~~~i~Vv~-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~~~~~ 139 (270)
..+...++.+.+ .+...+.|.| +|..+ ...+- ..+ +.........+.+....++.....+... .
T Consensus 41 ~~l~~~~~~~~~~~~~~~i~v~d~~G~~~---~~~~~--~~i--G~~~~~~~~~~al~G~~~~~~~~~~~g~-------~ 106 (142)
T 3by8_A 41 SGIQAIAEAVRKRNDLLFIVVTDMQSLRY---SHPEA--QRI--GQPFKGDDILKALNGEENVAINRGFLAQ-------A 106 (142)
T ss_dssp CSHHHHHHHHHHHTTCSEEEEEETTCBBS---CCSSG--GGT--TSBCCCGGGTGGGGTCCEEEEECSSSSC-------E
T ss_pred HHHHHHHHHHHhhcCCcEEEEECCCCcEE---ECCCh--HHC--CCcCCCCCHHHHhCCCeEEEEecCccEE-------E
Confidence 567777777664 5788888898 66432 11111 111 2111112344445443332222111000 0
Q ss_pred CCCEEEEEeCCCcEEEEEeHHHHHH
Q 024256 140 KFLHLPVVDRDGDVVDVVDVIHITH 164 (270)
Q Consensus 140 ~~~~lpVvd~~g~~~Givt~~dll~ 164 (270)
=.-..||.|++|+++|+|+..-.+.
T Consensus 107 ~~~~~PV~~~~g~viGvv~vg~~~~ 131 (142)
T 3by8_A 107 LRVFTPIYDENHKQIGVVAIGLELS 131 (142)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEEHH
T ss_pred EEEEEeEEcCCCCEEEEEEEeEEHH
Confidence 0123599987899999997644333
No 134
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=31.64 E-value=42 Score=25.12 Aligned_cols=33 Identities=21% Similarity=0.247 Sum_probs=26.4
Q ss_pred HHHHHHHHHHCCCcEEEEEeCCEEEEEeeHHHH
Q 024256 64 VLMATKKMLELRLSSAVVTVENKPRGILTSKDI 96 (270)
Q Consensus 64 v~~a~~~m~~~~~~~i~Vv~~~~~~Givt~~dl 96 (270)
+.+.++.+.+.+.+.+.|..+++++|+|...|-
T Consensus 121 ~~~~~~~la~~G~T~v~VA~d~~l~GvIalaD~ 153 (156)
T 1svj_A 121 VDQKVDQVARQGATPLVVVEGSRVLGVIALKDI 153 (156)
T ss_dssp HHHHHHHHHHTTCEEEEEEETTEEEEEEEEEEC
T ss_pred HHHHHHHHHhCCCCEEEEEECCEEEEEEEEecC
Confidence 566667777788888888889999999987764
No 135
>3fan_A Non-structural protein; chymotrypsin-like, N-terminal beta-barrels, C-terminal alpha-beta extra domain; 1.90A {Porcine respiratory and reproductivesyndrome virus} PDB: 3fao_A
Probab=28.22 E-value=32 Score=27.30 Aligned_cols=26 Identities=19% Similarity=0.125 Sum_probs=18.6
Q ss_pred CCCCEEEEEeCCCcEEEEEeHHHHHH
Q 024256 139 GKFLHLPVVDRDGDVVDVVDVIHITH 164 (270)
Q Consensus 139 ~~~~~lpVvd~~g~~~Givt~~dll~ 164 (270)
-+-+.-||+|.+|+++||-+..|=..
T Consensus 124 pGdSGsPVvn~dG~VIGVHt~s~~~g 149 (213)
T 3fan_A 124 CGDSGSPVITEAGELVGVHTGSNKQG 149 (213)
T ss_dssp CCSTTCEEEETTSCEEEEEEC-----
T ss_pred CCCCCCccCCCCCcEEEEEeccCCcc
Confidence 46677899999999999998877554
No 136
>2w5e_A Putative serine protease; coiled coil, transmembrane, thiol protease, RNA replication, ribosomal frameshifting, catalytic triad, membrane; 2.00A {Human astrovirus 1}
Probab=25.72 E-value=40 Score=25.39 Aligned_cols=23 Identities=22% Similarity=0.248 Sum_probs=18.7
Q ss_pred HhCCCCEEEEEeCCCcEEEEEeH
Q 024256 137 HDGKFLHLPVVDRDGDVVDVVDV 159 (270)
Q Consensus 137 ~~~~~~~lpVvd~~g~~~Givt~ 159 (270)
...+.+.-|++|.+|+++||.+.
T Consensus 122 i~pGnSGGPl~n~~G~VVGI~~~ 144 (163)
T 2w5e_A 122 TQDGMSGAPVCDKYCRVLAVHQT 144 (163)
T ss_dssp CSSCCTTCEEECTTSCEEEEEEE
T ss_pred eCCCCchhhEEcCCCEEEEEEcc
Confidence 34567788999999999999863
No 137
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=25.21 E-value=81 Score=27.20 Aligned_cols=70 Identities=13% Similarity=0.032 Sum_probs=43.3
Q ss_pred ChhhhhhhHHHHHHHhhhHHhhCCCCCChhHHHHHHHHhhCCCCccccccCCCceeEECCCCCHHHHHHHHHHCCCcEEE
Q 024256 1 MERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAV 80 (270)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~tv~~a~~~m~~~~~~~i~ 80 (270)
|+..++..++.++++.| |++.++.+.-++.+.+...+.+ .+ ....+.......+.++.+.+.+++ ++
T Consensus 50 M~~vte~~lA~A~a~~G-----g~gvi~~~~s~ee~~~~i~~~~--~~-----~~~~~g~~~~~~e~~~~a~~aGvd-vI 116 (361)
T 3r2g_A 50 MDTITESNMANFMHSKG-----AMGALHRFMTIEENIQEFKKCK--GP-----VFVSVGCTENELQRAEALRDAGAD-FF 116 (361)
T ss_dssp STTTCSHHHHHHHHHTT-----CEEBCCSCSCHHHHHHHHHTCC--SC-----CBEEECSSHHHHHHHHHHHHTTCC-EE
T ss_pred CCCchHHHHHHHHHHcC-----CCEEEeCCCCHHHHHHHHhhcc--eE-----EEEEcCCCHHHHHHHHHHHHcCCC-EE
Confidence 67788999999999999 8888887644555544442221 11 122232233445667777777887 44
Q ss_pred EEe
Q 024256 81 VTV 83 (270)
Q Consensus 81 Vv~ 83 (270)
++|
T Consensus 117 ~id 119 (361)
T 3r2g_A 117 CVD 119 (361)
T ss_dssp EEE
T ss_pred EEe
Confidence 554
No 138
>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A
Probab=24.16 E-value=42 Score=26.67 Aligned_cols=21 Identities=24% Similarity=0.363 Sum_probs=17.0
Q ss_pred CCCEEEEEeCCCcEEEEEeHH
Q 024256 140 KFLHLPVVDRDGDVVDVVDVI 160 (270)
Q Consensus 140 ~~~~lpVvd~~g~~~Givt~~ 160 (270)
+-+.=|++|.+|+++||++..
T Consensus 187 G~SGGPLv~~~G~vVGI~s~~ 207 (231)
T 3tjo_A 187 GNAGGPLVNLDGEVIGINTLK 207 (231)
T ss_dssp TTTTSEEECTTSCEEEEEEEE
T ss_pred CCchhHeecCCCeEEEEEeEE
Confidence 455669999889999999763
No 139
>2qkp_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.75A {Streptococcus mutans}
Probab=24.09 E-value=40 Score=24.74 Aligned_cols=16 Identities=31% Similarity=0.461 Sum_probs=13.1
Q ss_pred EEEEEeCCCcEEEEEe
Q 024256 143 HLPVVDRDGDVVDVVD 158 (270)
Q Consensus 143 ~lpVvd~~g~~~Givt 158 (270)
+.||.|++|+++|++.
T Consensus 110 ~~Pi~d~~G~~~G~ve 125 (151)
T 2qkp_A 110 YAAVRDQAGDFQGVLE 125 (151)
T ss_dssp EEEEECTTCCEEEEEE
T ss_pred EEEEECCCCCEEEEEE
Confidence 5688888899999883
No 140
>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A
Probab=22.39 E-value=45 Score=26.54 Aligned_cols=21 Identities=10% Similarity=0.090 Sum_probs=17.2
Q ss_pred CCCCEEEEEeCCCcEEEEEeH
Q 024256 139 GKFLHLPVVDRDGDVVDVVDV 159 (270)
Q Consensus 139 ~~~~~lpVvd~~g~~~Givt~ 159 (270)
.+-+.=|++|.+|+++||++.
T Consensus 173 ~G~SGGPlv~~~G~vvGI~s~ 193 (237)
T 3lgi_A 173 HGNSGGALVNSLGELMGINTL 193 (237)
T ss_dssp TTCTTCEEECTTCCEEEEECC
T ss_pred CCCchHHeeCCCCeEEEEEee
Confidence 355667999989999999975
No 141
>3sti_A Protease DEGQ; serine protease, PDZ domain, chaperone, hydrolase; 2.60A {Escherichia coli}
Probab=20.80 E-value=54 Score=26.45 Aligned_cols=21 Identities=5% Similarity=0.134 Sum_probs=17.3
Q ss_pred CCCCEEEEEeCCCcEEEEEeH
Q 024256 139 GKFLHLPVVDRDGDVVDVVDV 159 (270)
Q Consensus 139 ~~~~~lpVvd~~g~~~Givt~ 159 (270)
.+-+.=|++|.+|+++||.+.
T Consensus 184 ~G~SGGPLvn~~G~vVGI~s~ 204 (245)
T 3sti_A 184 RGNSGGALLNLNGELIGINTA 204 (245)
T ss_dssp TTTTTSEEECTTSCEEEEEEC
T ss_pred CCcchhHeecCCCeEEEEEEe
Confidence 355677999989999999876
No 142
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=20.71 E-value=75 Score=27.43 Aligned_cols=25 Identities=40% Similarity=0.450 Sum_probs=21.7
Q ss_pred ChhhhhhhHHHHHHHhhhHHhhCCCCCChh
Q 024256 1 MERAAEKGKAIAAAVEGVEKHWGTSISGPN 30 (270)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 30 (270)
|+.+++.+++.+++++| |+++++.+
T Consensus 54 M~~vs~~~lA~avA~aG-----Glg~i~~~ 78 (366)
T 4fo4_A 54 MDTVTEARLAIALAQEG-----GIGFIHKN 78 (366)
T ss_dssp CTTTCSHHHHHHHHHTT-----CEEEECSS
T ss_pred CCCCChHHHHHHHHHcC-----CceEeecC
Confidence 78889999999999999 98877754
No 143
>3k6y_A Serine protease, possible membrane-associated serine protease; oxidative stress, disulfide, BENT helix, HY protease; 1.30A {Mycobacterium tuberculosis} PDB: 3k6z_A 3lt3_A
Probab=20.57 E-value=55 Score=25.93 Aligned_cols=21 Identities=29% Similarity=0.232 Sum_probs=17.2
Q ss_pred CCCCEEEEEeCCCcEEEEEeH
Q 024256 139 GKFLHLPVVDRDGDVVDVVDV 159 (270)
Q Consensus 139 ~~~~~lpVvd~~g~~~Givt~ 159 (270)
.+-+.=|++|.+|+++||++.
T Consensus 180 ~GdSGGPLv~~~G~vvGI~s~ 200 (237)
T 3k6y_A 180 QGDSGGPLIDLNGQVLGVVFG 200 (237)
T ss_dssp TTCTTCEEECTTSCEEEEEEE
T ss_pred CCccHHHEECCCCEEEEEEEe
Confidence 355677999988999999976
No 144
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=20.14 E-value=76 Score=23.66 Aligned_cols=34 Identities=18% Similarity=0.219 Sum_probs=26.2
Q ss_pred HHHHHHHhHhCCCCEEEEEeCCCcEEEEEeHHHHH
Q 024256 129 IVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHIT 163 (270)
Q Consensus 129 l~~a~~~~~~~~~~~lpVvd~~g~~~Givt~~dll 163 (270)
+.+..+.+...+...+.|-. +|+++|+|...|-+
T Consensus 121 ~~~~~~~la~~G~T~v~VA~-d~~l~GvIalaD~i 154 (156)
T 1svj_A 121 VDQKVDQVARQGATPLVVVE-GSRVLGVIALKDIV 154 (156)
T ss_dssp HHHHHHHHHHTTCEEEEEEE-TTEEEEEEEEEECC
T ss_pred HHHHHHHHHhCCCCEEEEEE-CCEEEEEEEEecCC
Confidence 66777778888876676665 79999999887744
No 145
>1vd2_A Protein kinase C, IOTA type; PB1 domain, OPCA motif, APKC, ZIP/P62, MEK5, molecular recognition, transferase; NMR {Homo sapiens} SCOP: d.15.2.2 PDB: 1wmh_A
Probab=20.12 E-value=83 Score=21.16 Aligned_cols=28 Identities=21% Similarity=0.255 Sum_probs=24.9
Q ss_pred CceeEEeecCCCCeeEeecCCCChHHHHHhhh
Q 024256 234 SAFAFKVQDNKGLMHRFTCGMLPFPNFIEVTN 265 (270)
Q Consensus 234 ~~~~~~VvD~~g~l~~~~vGivs~~Dil~~i~ 265 (270)
..|..+-+|++|.. |-|-|..|+-+|++
T Consensus 45 ~~f~lky~DEeGD~----itisSd~EL~eAl~ 72 (89)
T 1vd2_A 45 QLFTMKWIDEEGDP----CTVSSQLELEEAFR 72 (89)
T ss_dssp CCEEEEECCSSSCC----EECCSHHHHHHHHH
T ss_pred CeEEEEEECCCCCc----ccccCHHHHHHHHH
Confidence 44568899999999 99999999999987
Done!