BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024258
(270 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255581357|ref|XP_002531488.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223528897|gb|EEF30895.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 257
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 101/106 (95%), Positives = 104/106 (98%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLL 106
FVRYKYADEAQKAV+RLDGRVVDGREITVQFAKYGPNAERI +G +
Sbjct: 61 FVRYKYADEAQKAVERLDGRVVDGREITVQFAKYGPNAERIHKGRI 106
>gi|217073798|gb|ACJ85259.1| unknown [Medicago truncatula]
Length = 280
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 97/106 (91%), Positives = 104/106 (98%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGRSGPPDI+DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIP+DRRTG+SRGFA
Sbjct: 1 MSHFGRSGPPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLL 106
FVRYKYADEA KAVDRLDGR+VDGREITVQFAKYGPNAERI++G +
Sbjct: 61 FVRYKYADEASKAVDRLDGRMVDGREITVQFAKYGPNAERIQKGRI 106
>gi|3334756|emb|CAA76346.1| putative arginine/serine-rich splicing factor [Medicago sativa
subsp. x varia]
Length = 286
Score = 207 bits (526), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 97/106 (91%), Positives = 104/106 (98%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGRSGPPDI+DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIP+DRRTG+SRGFA
Sbjct: 1 MSHFGRSGPPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLL 106
FVRYKYADEA KAVDRLDGR+VDGREITVQFAKYGPNAERI++G +
Sbjct: 61 FVRYKYADEASKAVDRLDGRMVDGREITVQFAKYGPNAERIQKGRI 106
>gi|225448281|ref|XP_002274860.1| PREDICTED: uncharacterized protein LOC100242306 [Vitis vinifera]
gi|296086805|emb|CBI32954.3| unnamed protein product [Vitis vinifera]
Length = 255
Score = 207 bits (526), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 97/106 (91%), Positives = 102/106 (96%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGRSGPPDI DT+SLLVLNITFRTTADDLFP FDKYGKVVDIFIPRDRRTG+SRGFA
Sbjct: 1 MSHFGRSGPPDIKDTFSLLVLNITFRTTADDLFPFFDKYGKVVDIFIPRDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLL 106
FVRYKYADEAQKAVDRLDGR+VDGREITVQFAKYGPNAERI +G +
Sbjct: 61 FVRYKYADEAQKAVDRLDGRIVDGREITVQFAKYGPNAERIHKGRI 106
>gi|388519919|gb|AFK48021.1| unknown [Medicago truncatula]
Length = 281
Score = 206 bits (525), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 96/106 (90%), Positives = 104/106 (98%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGRSGPPDI+DTYSLLVLN+TFRTTADDLFPLFDKYGKVVDIFIP+DRRTG+SRGFA
Sbjct: 1 MSHFGRSGPPDISDTYSLLVLNVTFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLL 106
FVRYKYADEA KAVDRLDGR+VDGREITVQFAKYGPNAERI++G +
Sbjct: 61 FVRYKYADEASKAVDRLDGRMVDGREITVQFAKYGPNAERIQKGRI 106
>gi|356512057|ref|XP_003524737.1| PREDICTED: uncharacterized protein LOC100804370 [Glycine max]
Length = 267
Score = 206 bits (525), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 97/106 (91%), Positives = 104/106 (98%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGRSGPPDI+DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIP+DRRTG+SRGFA
Sbjct: 1 MSHFGRSGPPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLL 106
FVRYKYADEAQKAV+RLDGR+VDGREITVQFAKYGPNAERI +G +
Sbjct: 61 FVRYKYADEAQKAVERLDGRMVDGREITVQFAKYGPNAERIHKGRI 106
>gi|15237641|ref|NP_201225.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
gi|30697964|ref|NP_851261.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
gi|9759396|dbj|BAB09851.1| unnamed protein product [Arabidopsis thaliana]
gi|17380868|gb|AAL36246.1| unknown protein [Arabidopsis thaliana]
gi|21689657|gb|AAM67450.1| unknown protein [Arabidopsis thaliana]
gi|22022546|gb|AAM83231.1| AT5g64200/MSJ1_4 [Arabidopsis thaliana]
gi|23505861|gb|AAN28790.1| At5g64200/MSJ1_4 [Arabidopsis thaliana]
gi|332010470|gb|AED97853.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
gi|332010471|gb|AED97854.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
Length = 303
Score = 206 bits (525), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 94/106 (88%), Positives = 101/106 (95%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGRSGPPDI+DTYSLLVLNITFRTTADDL+PLF KYGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLL 106
FVRYKY DEA KAV+RLDGRVVDGREITVQFAKYGPNAE+I +G +
Sbjct: 61 FVRYKYKDEAHKAVERLDGRVVDGREITVQFAKYGPNAEKISKGRV 106
>gi|9843653|emb|CAC03600.1| splicing factor SC35 [Arabidopsis thaliana]
Length = 303
Score = 206 bits (524), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 94/106 (88%), Positives = 101/106 (95%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGRSGPPDI+DTYSLLVLNITFRTTADDL+PLF KYGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLL 106
FVRYKY DEA KAV+RLDGRVVDGREITVQFAKYGPNAE+I +G +
Sbjct: 61 FVRYKYKDEAHKAVERLDGRVVDGREITVQFAKYGPNAEKISKGRV 106
>gi|356524836|ref|XP_003531034.1| PREDICTED: uncharacterized protein LOC100778928 [Glycine max]
Length = 267
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/106 (91%), Positives = 104/106 (98%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGRSGPPDI+DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIP+DRRTG+SRGFA
Sbjct: 1 MSHFGRSGPPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLL 106
FVRYKYADEAQKAV+RLDGR+VDGREITVQFAKYGPNAERI +G +
Sbjct: 61 FVRYKYADEAQKAVERLDGRMVDGREITVQFAKYGPNAERIHKGRI 106
>gi|255642028|gb|ACU21281.1| unknown [Glycine max]
Length = 254
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/106 (91%), Positives = 104/106 (98%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGRSGPPDI+DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIP+DRRTG+SRGFA
Sbjct: 1 MSHFGRSGPPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLL 106
FVRYKYADEAQKAV+RLDGR+VDGREITVQFAKYGPNAERI +G +
Sbjct: 61 FVRYKYADEAQKAVERLDGRMVDGREITVQFAKYGPNAERIHKGRI 106
>gi|357490719|ref|XP_003615647.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
gi|355516982|gb|AES98605.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
Length = 140
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/104 (93%), Positives = 100/104 (96%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGR GPPDI DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTG+SRGFA
Sbjct: 1 MSHFGRQGPPDIADTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEG 104
FVRYKYADEA KAVDRLDGR+VDGREITVQFAKYGPNAERI +G
Sbjct: 61 FVRYKYADEASKAVDRLDGRMVDGREITVQFAKYGPNAERIHKG 104
>gi|297797433|ref|XP_002866601.1| hypothetical protein ARALYDRAFT_496619 [Arabidopsis lyrata subsp.
lyrata]
gi|297312436|gb|EFH42860.1| hypothetical protein ARALYDRAFT_496619 [Arabidopsis lyrata subsp.
lyrata]
Length = 305
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 94/106 (88%), Positives = 101/106 (95%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGRSGPPDI+DTYSLLVLNITFRTTADDL+PLF KYGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLL 106
FVRYKY DEA KAV+RLDGRVVDGREITVQFAKYGPNAE+I +G +
Sbjct: 61 FVRYKYKDEAHKAVERLDGRVVDGREITVQFAKYGPNAEKISKGRV 106
>gi|224066947|ref|XP_002302293.1| predicted protein [Populus trichocarpa]
gi|222844019|gb|EEE81566.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/109 (89%), Positives = 104/109 (95%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGRSGPPDI DT+SLLVLNITFRTTADDLFPLFDKYGKVVD+FIPRDRRTG+SRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLLNHS 109
FVRYKYADEAQKAVDRLDGRVVDGREI VQFAKYGPNAERI++G + S
Sbjct: 61 FVRYKYADEAQKAVDRLDGRVVDGREIMVQFAKYGPNAERIRDGRIVES 109
>gi|224073347|ref|XP_002304081.1| predicted protein [Populus trichocarpa]
gi|222841513|gb|EEE79060.1| predicted protein [Populus trichocarpa]
Length = 142
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/106 (92%), Positives = 102/106 (96%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGRSGPPDI DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTG+SRGFA
Sbjct: 1 MSHFGRSGPPDIADTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLL 106
FVRYKYADEAQKAV+RLDGRVVDGREITVQFAKYGP AERI +G +
Sbjct: 61 FVRYKYADEAQKAVERLDGRVVDGREITVQFAKYGPKAERIHKGRI 106
>gi|118484490|gb|ABK94120.1| unknown [Populus trichocarpa]
Length = 302
Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 96/106 (90%), Positives = 102/106 (96%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGRSGPPDI DT+SLLVLNITFRTTADDLFPLFDKYGKVVD+FIPRDRRTG+SRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLL 106
FVRYKYA+EAQKAVDRLDGRVVDGREI VQFAKYGPNAERI+ G +
Sbjct: 61 FVRYKYAEEAQKAVDRLDGRVVDGREIMVQFAKYGPNAERIRSGRI 106
>gi|357490717|ref|XP_003615646.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
gi|217073250|gb|ACJ84984.1| unknown [Medicago truncatula]
gi|355516981|gb|AES98604.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
Length = 267
Score = 203 bits (517), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 97/106 (91%), Positives = 101/106 (95%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGR GPPDI DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTG+SRGFA
Sbjct: 1 MSHFGRQGPPDIADTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLL 106
FVRYKYADEA KAVDRLDGR+VDGREITVQFAKYGPNAERI +G +
Sbjct: 61 FVRYKYADEASKAVDRLDGRMVDGREITVQFAKYGPNAERIHKGRI 106
>gi|449528821|ref|XP_004171401.1| PREDICTED: uncharacterized LOC101216322 [Cucumis sativus]
Length = 251
Score = 203 bits (517), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 93/106 (87%), Positives = 103/106 (97%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGRSGPPDI DTYSLLVLNITFRTTADDL+PLFDKYGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLL 106
FVRYKYADEAQKA+D+LDGR++DGREI VQFAKYGPNAE+I++G +
Sbjct: 61 FVRYKYADEAQKAIDKLDGRMLDGREIMVQFAKYGPNAEKIRKGRV 106
>gi|449438193|ref|XP_004136874.1| PREDICTED: uncharacterized protein LOC101219227 [Cucumis sativus]
Length = 283
Score = 203 bits (516), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 97/109 (88%), Positives = 104/109 (95%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGRSGPPDITDTYSLLVLNITFRTTADDL+PLF KYGKVVDIFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLLNHS 109
FVRYKYADEAQKAV+RLDG +VDGREITVQFAKYGPNAERI +G ++ +
Sbjct: 61 FVRYKYADEAQKAVERLDGTMVDGREITVQFAKYGPNAERIHKGKISEA 109
>gi|449478880|ref|XP_004155443.1| PREDICTED: uncharacterized protein LOC101223695 [Cucumis sativus]
Length = 283
Score = 203 bits (516), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 97/109 (88%), Positives = 104/109 (95%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGRSGPPDITDTYSLLVLNITFRTTADDL+PLF KYGKVVDIFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLLNHS 109
FVRYKYADEAQKAV+RLDG +VDGREITVQFAKYGPNAERI +G ++ +
Sbjct: 61 FVRYKYADEAQKAVERLDGTMVDGREITVQFAKYGPNAERIHKGKISEA 109
>gi|449450504|ref|XP_004143002.1| PREDICTED: uncharacterized protein LOC101216322 [Cucumis sativus]
Length = 257
Score = 202 bits (515), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 93/106 (87%), Positives = 103/106 (97%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGRSGPPDI DTYSLLVLNITFRTTADDL+PLFDKYGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLL 106
FVRYKYADEAQKA+D+LDGR++DGREI VQFAKYGPNAE+I++G +
Sbjct: 61 FVRYKYADEAQKAIDKLDGRMLDGREIMVQFAKYGPNAEKIRKGRV 106
>gi|225459316|ref|XP_002285794.1| PREDICTED: uncharacterized protein LOC100243776 [Vitis vinifera]
gi|302141951|emb|CBI19154.3| unnamed protein product [Vitis vinifera]
Length = 257
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/106 (90%), Positives = 101/106 (95%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGRSGPPDI DTYSLLVLNITFRTTADDLFPLFDKYGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLL 106
FVRYKYADEAQKAV++LDGR VDGREI VQFAKYGPNAERI +G +
Sbjct: 61 FVRYKYADEAQKAVEKLDGRNVDGREIMVQFAKYGPNAERIHKGRI 106
>gi|224099521|ref|XP_002334472.1| predicted protein [Populus trichocarpa]
gi|222872360|gb|EEF09491.1| predicted protein [Populus trichocarpa]
Length = 101
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 96/101 (95%), Positives = 99/101 (98%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGRSGPPDI DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTG+SRGFA
Sbjct: 1 MSHFGRSGPPDIADTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERI 101
FVRYKYADEAQKAV+RLDGRVVDGREITVQFAKYGP AER+
Sbjct: 61 FVRYKYADEAQKAVERLDGRVVDGREITVQFAKYGPKAERM 101
>gi|388505176|gb|AFK40654.1| unknown [Medicago truncatula]
Length = 267
Score = 200 bits (509), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 96/106 (90%), Positives = 100/106 (94%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGR GPPDI DTYSLLVLNITFRTTAD LFPLFDKYGKVVDIFIPRDRRTG+SRGFA
Sbjct: 1 MSHFGRQGPPDIADTYSLLVLNITFRTTADGLFPLFDKYGKVVDIFIPRDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLL 106
FVRYKYADEA KAVDRLDGR+VDGREITVQFAKYGPNAERI +G +
Sbjct: 61 FVRYKYADEASKAVDRLDGRMVDGREITVQFAKYGPNAERIHKGRI 106
>gi|78191396|gb|ABB29919.1| unknown [Solanum tuberosum]
Length = 258
Score = 199 bits (507), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 94/106 (88%), Positives = 101/106 (95%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGRSGPPDI DTYSLLVLN+TFRTTADDLFPLFDKYGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIKDTYSLLVLNVTFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLL 106
FVRYKY DEAQKAV++LDGRVVDGREI V+FAKYGPNAERI +G +
Sbjct: 61 FVRYKYQDEAQKAVEKLDGRVVDGREIMVRFAKYGPNAERIDKGRI 106
>gi|148909922|gb|ABR18047.1| unknown [Picea sitchensis]
Length = 267
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 94/109 (86%), Positives = 100/109 (91%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGRSGPPDI DTYSLLVLNITFRT+ADDLFPLFD+YGKVVDIFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTYSLLVLNITFRTSADDLFPLFDRYGKVVDIFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLLNHS 109
F RYKYADEAQKAV+RLDG+ VDGR I VQFAKYGPNAERI+ G + S
Sbjct: 61 FFRYKYADEAQKAVERLDGKNVDGRYIMVQFAKYGPNAERIQRGRITTS 109
>gi|224082127|ref|XP_002306575.1| predicted protein [Populus trichocarpa]
gi|222856024|gb|EEE93571.1| predicted protein [Populus trichocarpa]
Length = 101
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/101 (93%), Positives = 99/101 (98%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGRSGPPDI DT+SLLVLNITFRTTADDLFPLFDKYGKVVD+FIPRDRRTG+SRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERI 101
FVRYKYA+EAQKAVDRLDGRVVDGREI VQFAKYGPNAER+
Sbjct: 61 FVRYKYAEEAQKAVDRLDGRVVDGREIMVQFAKYGPNAERM 101
>gi|218201347|gb|EEC83774.1| hypothetical protein OsI_29668 [Oryza sativa Indica Group]
gi|222640763|gb|EEE68895.1| hypothetical protein OsJ_27729 [Oryza sativa Japonica Group]
Length = 298
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 91/106 (85%), Positives = 100/106 (94%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGRSGPPDI DT+SLLVLNI+FRTTADDLFPLFD+YGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLFPLFDRYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLL 106
FVRYKYA+EAQKA+DRLDGR VDGR I VQFAKYGPNAE I++G +
Sbjct: 61 FVRYKYAEEAQKAIDRLDGRNVDGRNIMVQFAKYGPNAEPIRKGRI 106
>gi|357148211|ref|XP_003574673.1| PREDICTED: uncharacterized protein LOC100824108 [Brachypodium
distachyon]
Length = 283
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 91/106 (85%), Positives = 100/106 (94%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGR+GPPDI DT+SLLVLNI+FRTTADDL+PLFD+YGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRAGPPDIRDTFSLLVLNISFRTTADDLYPLFDRYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLL 106
FVRYKYADEAQKAVDRLDGR VDGR I VQFAKYGPNAE I++G +
Sbjct: 61 FVRYKYADEAQKAVDRLDGRNVDGRNIMVQFAKYGPNAEPIRKGRV 106
>gi|226510383|ref|NP_001140384.1| hypothetical protein [Zea mays]
gi|194699256|gb|ACF83712.1| unknown [Zea mays]
gi|413925181|gb|AFW65113.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
gi|448878214|gb|AGE46070.1| arginine/serine-rich splicing factor SC30 transcript IX [Zea mays]
Length = 274
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 91/104 (87%), Positives = 99/104 (95%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGRSGPPDI DT+SLLVLNI+FRTTADDLFPLF++YGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEG 104
FVRYKYADEAQKA+DRLDGR VDGR I VQFAKYGPNAE I++G
Sbjct: 61 FVRYKYADEAQKAIDRLDGRDVDGRNIMVQFAKYGPNAEPIRKG 104
>gi|448878206|gb|AGE46066.1| arginine/serine-rich splicing factor SC30 transcript V [Zea mays]
Length = 262
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 91/107 (85%), Positives = 100/107 (93%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGRSGPPDI DT+SLLVLNI+FRTTADDLFPLF++YGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLLN 107
FVRYKYADEAQKA+DRLDGR VDGR I VQFAKYGPNAE I++G +
Sbjct: 61 FVRYKYADEAQKAIDRLDGRDVDGRNIMVQFAKYGPNAEPIRKGRVK 107
>gi|238006960|gb|ACR34515.1| unknown [Zea mays]
gi|413925185|gb|AFW65117.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
gi|413925186|gb|AFW65118.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
gi|448878198|gb|AGE46062.1| arginine/serine-rich splicing factor SC30 transcript I [Zea mays]
gi|448878204|gb|AGE46065.1| arginine/serine-rich splicing factor SC30 transcript IV [Zea mays]
Length = 264
Score = 197 bits (500), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 91/107 (85%), Positives = 100/107 (93%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGRSGPPDI DT+SLLVLNI+FRTTADDLFPLF++YGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLLN 107
FVRYKYADEAQKA+DRLDGR VDGR I VQFAKYGPNAE I++G +
Sbjct: 61 FVRYKYADEAQKAIDRLDGRDVDGRNIMVQFAKYGPNAEPIRKGRVK 107
>gi|413925182|gb|AFW65114.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
Length = 268
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 91/107 (85%), Positives = 100/107 (93%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGRSGPPDI DT+SLLVLNI+FRTTADDLFPLF++YGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLLN 107
FVRYKYADEAQKA+DRLDGR VDGR I VQFAKYGPNAE I++G +
Sbjct: 61 FVRYKYADEAQKAIDRLDGRDVDGRNIMVQFAKYGPNAEPIRKGRVK 107
>gi|448878200|gb|AGE46063.1| arginine/serine-rich splicing factor SC30 transcript II [Zea mays]
Length = 254
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 91/107 (85%), Positives = 100/107 (93%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGRSGPPDI DT+SLLVLNI+FRTTADDLFPLF++YGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLLN 107
FVRYKYADEAQKA+DRLDGR VDGR I VQFAKYGPNAE I++G +
Sbjct: 61 FVRYKYADEAQKAIDRLDGRDVDGRNIMVQFAKYGPNAEPIRKGRVK 107
>gi|448878212|gb|AGE46069.1| arginine/serine-rich splicing factor SC30 transcript VIII [Zea
mays]
Length = 261
Score = 196 bits (498), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 91/107 (85%), Positives = 100/107 (93%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGRSGPPDI DT+SLLVLNI+FRTTADDLFPLF++YGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLLN 107
FVRYKYADEAQKA+DRLDGR VDGR I VQFAKYGPNAE I++G +
Sbjct: 61 FVRYKYADEAQKAIDRLDGRDVDGRNIMVQFAKYGPNAEPIRKGRVK 107
>gi|448878208|gb|AGE46067.1| arginine/serine-rich splicing factor SC30 transcript VI [Zea mays]
Length = 270
Score = 196 bits (498), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 91/107 (85%), Positives = 100/107 (93%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGRSGPPDI DT+SLLVLNI+FRTTADDLFPLF++YGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLLN 107
FVRYKYADEAQKA+DRLDGR VDGR I VQFAKYGPNAE I++G +
Sbjct: 61 FVRYKYADEAQKAIDRLDGRDVDGRNIMVQFAKYGPNAEPIRKGRVK 107
>gi|115476996|ref|NP_001062094.1| Os08g0486200 [Oryza sativa Japonica Group]
gi|42408182|dbj|BAD09319.1| putative splicing factor, arginine/serine-rich [Oryza sativa
Japonica Group]
gi|113624063|dbj|BAF24008.1| Os08g0486200 [Oryza sativa Japonica Group]
gi|215693774|dbj|BAG88973.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737273|dbj|BAG96202.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 289
Score = 196 bits (498), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 91/106 (85%), Positives = 100/106 (94%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGRSGPPDI DT+SLLVLNI+FRTTADDLFPLFD+YGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLFPLFDRYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLL 106
FVRYKYA+EAQKA+DRLDGR VDGR I VQFAKYGPNAE I++G +
Sbjct: 61 FVRYKYAEEAQKAIDRLDGRNVDGRNIMVQFAKYGPNAEPIRKGRI 106
>gi|224032171|gb|ACN35161.1| unknown [Zea mays]
gi|413925183|gb|AFW65115.1| splicing factor, arginine/serine-rich 2 isoform 1 [Zea mays]
gi|413925184|gb|AFW65116.1| splicing factor, arginine/serine-rich 2 isoform 2 [Zea mays]
gi|448878210|gb|AGE46068.1| arginine/serine-rich splicing factor SC30 transcript VII [Zea mays]
Length = 256
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 91/107 (85%), Positives = 100/107 (93%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGRSGPPDI DT+SLLVLNI+FRTTADDLFPLF++YGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLLN 107
FVRYKYADEAQKA+DRLDGR VDGR I VQFAKYGPNAE I++G +
Sbjct: 61 FVRYKYADEAQKAIDRLDGRDVDGRNIMVQFAKYGPNAEPIRKGRVK 107
>gi|357121974|ref|XP_003562691.1| PREDICTED: uncharacterized protein LOC100826320 [Brachypodium
distachyon]
Length = 238
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/106 (87%), Positives = 100/106 (94%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS FGRSGPP I DTYSLLVLNITFRTTADDLFPLFDKYG+VVDI+IPRDRRTGDSRGFA
Sbjct: 1 MSRFGRSGPPPIRDTYSLLVLNITFRTTADDLFPLFDKYGEVVDIYIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLL 106
FVRYKY DEAQKAVDRLDGR+VDGRE+ VQFAKYGPNAERI++G +
Sbjct: 61 FVRYKYEDEAQKAVDRLDGRLVDGREMMVQFAKYGPNAERIQKGRI 106
>gi|448878320|gb|AGE46123.1| arginine/serine-rich splicing factor SC31 transcript I [Sorghum
bicolor]
Length = 268
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 90/107 (84%), Positives = 100/107 (93%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGRSGPPDI DT+SLLVLNI+FRTTADDL+PLF++YGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLLN 107
FVRYKYADEAQKA+DRLDGR VDGR I VQFAKYGPNAE I++G +
Sbjct: 61 FVRYKYADEAQKAIDRLDGRNVDGRNIMVQFAKYGPNAEPIQKGRVK 107
>gi|448878326|gb|AGE46126.1| arginine/serine-rich splicing factor SC31 transcript IV [Sorghum
bicolor]
Length = 273
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 90/106 (84%), Positives = 100/106 (94%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGRSGPPDI DT+SLLVLNI+FRTTADDL+PLF++YGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLL 106
FVRYKYADEAQKA+DRLDGR VDGR I VQFAKYGPNAE I++G +
Sbjct: 61 FVRYKYADEAQKAIDRLDGRNVDGRNIMVQFAKYGPNAEPIQKGRV 106
>gi|116790938|gb|ABK25797.1| unknown [Picea sitchensis]
Length = 300
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 91/106 (85%), Positives = 97/106 (91%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGR GPPDI DTYSLLVLNITFRT+ADDLFPLFD+YGKVVDIFIPRD+RTGDSRGFA
Sbjct: 1 MSHFGRFGPPDIRDTYSLLVLNITFRTSADDLFPLFDRYGKVVDIFIPRDKRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLL 106
FVRYKYADEAQKA+DRLDGR VDGR I VQFAKYGPNAE + G +
Sbjct: 61 FVRYKYADEAQKAIDRLDGRNVDGRNIMVQFAKYGPNAEATQRGRV 106
>gi|448878314|gb|AGE46120.1| arginine/serine-rich splicing factor SC30 transcript I [Sorghum
bicolor]
Length = 250
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/106 (87%), Positives = 99/106 (93%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS FGRSGPP I DTYSLLVLNITFRTTADDLFPLFDKYG++VDI+IPRDRRTGDSRGFA
Sbjct: 1 MSRFGRSGPPPIRDTYSLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLL 106
FVRYKY DEAQKAVDRLDGR+VDGREI VQFAKYGPNAERI +G +
Sbjct: 61 FVRYKYEDEAQKAVDRLDGRLVDGREIMVQFAKYGPNAERINKGRI 106
>gi|448878328|gb|AGE46127.1| arginine/serine-rich splicing factor SC31 transcript V [Sorghum
bicolor]
Length = 185
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 90/104 (86%), Positives = 99/104 (95%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGRSGPPDI DT+SLLVLNI+FRTTADDL+PLF++YGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEG 104
FVRYKYADEAQKA+DRLDGR VDGR I VQFAKYGPNAE I++G
Sbjct: 61 FVRYKYADEAQKAIDRLDGRNVDGRNIMVQFAKYGPNAEPIQKG 104
>gi|448878322|gb|AGE46124.1| arginine/serine-rich splicing factor SC31 transcript II [Sorghum
bicolor]
Length = 180
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 90/104 (86%), Positives = 99/104 (95%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGRSGPPDI DT+SLLVLNI+FRTTADDL+PLF++YGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEG 104
FVRYKYADEAQKA+DRLDGR VDGR I VQFAKYGPNAE I++G
Sbjct: 61 FVRYKYADEAQKAIDRLDGRNVDGRNIMVQFAKYGPNAEPIQKG 104
>gi|218200049|gb|EEC82476.1| hypothetical protein OsI_26921 [Oryza sativa Indica Group]
Length = 271
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/106 (87%), Positives = 98/106 (92%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS FGRSGPP I DTYSLLVLNITFRTTADDL PLF+KYG+VVDI+IPRDRRTGDSRGFA
Sbjct: 1 MSRFGRSGPPPIRDTYSLLVLNITFRTTADDLSPLFEKYGEVVDIYIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLL 106
FVRYKY DEAQKAVDRLDGRVVDGREI VQFAKYGPNAERI +G +
Sbjct: 61 FVRYKYEDEAQKAVDRLDGRVVDGREIMVQFAKYGPNAERIHKGKI 106
>gi|115473447|ref|NP_001060322.1| Os07g0623300 [Oryza sativa Japonica Group]
gi|33146621|dbj|BAC79909.1| putative splicing factor, arginine/serine-rich 2 (Splicing factor
SC35) [Oryza sativa Japonica Group]
gi|113611858|dbj|BAF22236.1| Os07g0623300 [Oryza sativa Japonica Group]
gi|215687327|dbj|BAG91873.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222637485|gb|EEE67617.1| hypothetical protein OsJ_25178 [Oryza sativa Japonica Group]
Length = 275
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 93/106 (87%), Positives = 98/106 (92%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS FGRSGPP I DTYSLLVLNITFRTTADDL PLF+KYG+VVDI+IPRDRRTGDSRGFA
Sbjct: 1 MSRFGRSGPPPIRDTYSLLVLNITFRTTADDLSPLFEKYGEVVDIYIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLL 106
FVRYKY DEAQKAVDRLDGRVVDGREI VQFAKYGPNAERI +G +
Sbjct: 61 FVRYKYEDEAQKAVDRLDGRVVDGREIMVQFAKYGPNAERIHKGKI 106
>gi|448878216|gb|AGE46071.1| arginine/serine-rich splicing factor SC30 transcript X [Zea mays]
Length = 136
Score = 193 bits (490), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 91/113 (80%), Positives = 102/113 (90%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGRSGPPDI DT+SLLVLNI+FRTTADDLFPLF++YGKVVD+F PRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFTPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDRS 113
FVRYKYADEAQKA+DRLDGR VDGR I VQFAKYGPNAE I++G + ++S
Sbjct: 61 FVRYKYADEAQKAIDRLDGRDVDGRNIMVQFAKYGPNAEPIRKGRVKEGVEKS 113
>gi|195657783|gb|ACG48359.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 254
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 90/107 (84%), Positives = 99/107 (92%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGRSGPPDI DT+SLLVLNI+FRTTADDLFPLF++YGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLLN 107
FVRYKYADEAQKA+DRLDGR VDGR I VQFAKYG NAE I++G +
Sbjct: 61 FVRYKYADEAQKAIDRLDGRDVDGRNIMVQFAKYGXNAEPIRKGRVK 107
>gi|194708586|gb|ACF88377.1| unknown [Zea mays]
gi|414590930|tpg|DAA41501.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
gi|414590931|tpg|DAA41502.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
Length = 238
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 93/107 (86%), Positives = 99/107 (92%), Gaps = 1/107 (0%)
Query: 1 MSHFGRSGPPD-ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGF 59
MS FGRSGPP I DTYSLLVLNITFRTTADDLFPLFDKYG++VDI+IPRDRRTGDSRGF
Sbjct: 1 MSRFGRSGPPPPIRDTYSLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGF 60
Query: 60 AFVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLL 106
AFVRYKY DEAQKAVDRLDGR+VDGREI VQFAKYGPNAERI +G +
Sbjct: 61 AFVRYKYEDEAQKAVDRLDGRLVDGREIMVQFAKYGPNAERINKGRI 107
>gi|226530532|ref|NP_001140562.1| uncharacterized protein LOC100272627 [Zea mays]
gi|194699996|gb|ACF84082.1| unknown [Zea mays]
gi|414590932|tpg|DAA41503.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
Length = 251
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 93/107 (86%), Positives = 99/107 (92%), Gaps = 1/107 (0%)
Query: 1 MSHFGRSGPPD-ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGF 59
MS FGRSGPP I DTYSLLVLNITFRTTADDLFPLFDKYG++VDI+IPRDRRTGDSRGF
Sbjct: 1 MSRFGRSGPPPPIRDTYSLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGF 60
Query: 60 AFVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLL 106
AFVRYKY DEAQKAVDRLDGR+VDGREI VQFAKYGPNAERI +G +
Sbjct: 61 AFVRYKYEDEAQKAVDRLDGRLVDGREIMVQFAKYGPNAERINKGRI 107
>gi|293334639|ref|NP_001169755.1| uncharacterized protein LOC100383636 [Zea mays]
gi|224031469|gb|ACN34810.1| unknown [Zea mays]
gi|414887660|tpg|DAA63674.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
gi|414887661|tpg|DAA63675.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
Length = 246
Score = 189 bits (481), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 92/107 (85%), Positives = 99/107 (92%), Gaps = 1/107 (0%)
Query: 1 MSHFGRSGPPD-ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGF 59
MS FGRSGPP I DTYSLLVLNITFRTTADDLFPLFDKYG++VDI+IPRDRRTGDSRGF
Sbjct: 1 MSRFGRSGPPPPIRDTYSLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGF 60
Query: 60 AFVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLL 106
AFVRYKY DEAQKAV+RLDGR+VDGREI VQFAKYGPNAERI +G +
Sbjct: 61 AFVRYKYEDEAQKAVERLDGRLVDGREIMVQFAKYGPNAERINKGRI 107
>gi|238011430|gb|ACR36750.1| unknown [Zea mays]
gi|414590933|tpg|DAA41504.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
gi|414590934|tpg|DAA41505.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
Length = 190
Score = 189 bits (481), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 93/107 (86%), Positives = 99/107 (92%), Gaps = 1/107 (0%)
Query: 1 MSHFGRSGPPD-ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGF 59
MS FGRSGPP I DTYSLLVLNITFRTTADDLFPLFDKYG++VDI+IPRDRRTGDSRGF
Sbjct: 1 MSRFGRSGPPPPIRDTYSLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGF 60
Query: 60 AFVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLL 106
AFVRYKY DEAQKAVDRLDGR+VDGREI VQFAKYGPNAERI +G +
Sbjct: 61 AFVRYKYEDEAQKAVDRLDGRLVDGREIMVQFAKYGPNAERINKGRI 107
>gi|448878330|gb|AGE46128.1| arginine/serine-rich splicing factor SC31 transcript VI [Sorghum
bicolor]
Length = 107
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/102 (87%), Positives = 96/102 (94%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGRSGPPDI DT+SLLVLNI+FRTTADDL+PLF++YGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIK 102
FVRYKYADEAQKA+DRLDGR VDGR I VQFAKYGPNAE I
Sbjct: 61 FVRYKYADEAQKAIDRLDGRNVDGRNIMVQFAKYGPNAEPIH 102
>gi|168064593|ref|XP_001784245.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664211|gb|EDQ50939.1| predicted protein [Physcomitrella patens subsp. patens]
gi|448878415|gb|AGE46170.1| arginine/serine-rich splicing factor SC37 transcript I
[Physcomitrella patens subsp. patens]
gi|448878417|gb|AGE46171.1| arginine/serine-rich splicing factor SC37 transcript II
[Physcomitrella patens subsp. patens]
Length = 319
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 87/106 (82%), Positives = 96/106 (90%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGR+GPPDI DTYSLLVLNITFRT+ADDL+PLFD+YGKVVDIFIPRDRRTG+SRGFA
Sbjct: 1 MSHFGRAGPPDIRDTYSLLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLL 106
FVRYKYADEAQKA++RLDGR VDGR I VQFAKYG E I+ G +
Sbjct: 61 FVRYKYADEAQKAIERLDGREVDGRHIVVQFAKYGRKDEPIQRGRI 106
>gi|195621804|gb|ACG32732.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 260
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 90/110 (81%), Positives = 99/110 (90%), Gaps = 5/110 (4%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGR+GPPDI DT+SLLVLNI+FRTTADDLFPLF++ GKVVD+FIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRTGPPDIRDTFSLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNA-----ERIKEGL 105
FVRYKYADEAQKA+DRLDGR VDGR I VQFAKYGPNA R+KEG+
Sbjct: 61 FVRYKYADEAQKAIDRLDGRNVDGRNIMVQFAKYGPNAVPIHKGRVKEGV 110
>gi|414869214|tpg|DAA47771.1| TPA: hypothetical protein ZEAMMB73_478975 [Zea mays]
Length = 254
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 90/110 (81%), Positives = 99/110 (90%), Gaps = 5/110 (4%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGR+GPPDI DT+SLLVLNI+FRTTADDLFPLF++ GKVVD+FIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRTGPPDIRDTFSLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNA-----ERIKEGL 105
FVRYKYADEAQKA+DRLDGR VDGR I VQFAKYGPNA R+KEG+
Sbjct: 61 FVRYKYADEAQKAIDRLDGRNVDGRNIMVQFAKYGPNAVPIHKGRVKEGV 110
>gi|212275520|ref|NP_001130064.1| uncharacterized protein LOC100191156 [Zea mays]
gi|194688202|gb|ACF78185.1| unknown [Zea mays]
gi|414869215|tpg|DAA47772.1| TPA: splicing factor, arginine/serine-rich 2 [Zea mays]
gi|448878192|gb|AGE46059.1| arginine/serine-rich splicing factor SC32 transcript I [Zea mays]
Length = 256
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 90/110 (81%), Positives = 99/110 (90%), Gaps = 5/110 (4%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGR+GPPDI DT+SLLVLNI+FRTTADDLFPLF++ GKVVD+FIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRTGPPDIRDTFSLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNA-----ERIKEGL 105
FVRYKYADEAQKA+DRLDGR VDGR I VQFAKYGPNA R+KEG+
Sbjct: 61 FVRYKYADEAQKAIDRLDGRNVDGRNIMVQFAKYGPNAVPIHKGRVKEGV 110
>gi|414887662|tpg|DAA63676.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
Length = 207
Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 92/107 (85%), Positives = 99/107 (92%), Gaps = 1/107 (0%)
Query: 1 MSHFGRSGPPD-ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGF 59
MS FGRSGPP I DTYSLLVLNITFRTTADDLFPLFDKYG++VDI+IPRDRRTGDSRGF
Sbjct: 1 MSRFGRSGPPPPIRDTYSLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGF 60
Query: 60 AFVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLL 106
AFVRYKY DEAQKAV+RLDGR+VDGREI VQFAKYGPNAERI +G +
Sbjct: 61 AFVRYKYEDEAQKAVERLDGRLVDGREIMVQFAKYGPNAERINKGRI 107
>gi|448878409|gb|AGE46167.1| arginine/serine-rich splicing factor SC39 transcript I
[Physcomitrella patens subsp. patens]
Length = 340
Score = 186 bits (472), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 86/106 (81%), Positives = 95/106 (89%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGR+GPPDI DTYSLLVLNITFRT+ADDL+PLFD+YGKVVDIFIPRDRRTG+SRGFA
Sbjct: 1 MSHFGRAGPPDIRDTYSLLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLL 106
FVRYKY+DEAQKA++RLDGR VDGR I VQ AKYG N E I G +
Sbjct: 61 FVRYKYSDEAQKAIERLDGRAVDGRNIVVQSAKYGRNDEPIHRGRI 106
>gi|448878419|gb|AGE46172.1| arginine/serine-rich splicing factor SC37 transcript III
[Physcomitrella patens subsp. patens]
Length = 257
Score = 186 bits (472), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 87/106 (82%), Positives = 96/106 (90%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGR+GPPDI DTYSLLVLNITFRT+ADDL+PLFD+YGKVVDIFIPRDRRTG+SRGFA
Sbjct: 1 MSHFGRAGPPDIRDTYSLLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLL 106
FVRYKYADEAQKA++RLDGR VDGR I VQFAKYG E I+ G +
Sbjct: 61 FVRYKYADEAQKAIERLDGREVDGRHIVVQFAKYGRKDEPIQRGRI 106
>gi|168015818|ref|XP_001760447.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688461|gb|EDQ74838.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 259
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 87/106 (82%), Positives = 95/106 (89%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGR+GPPDI DTYSLLVLNITFRT+ADDL+PLFD+YGKVVDIFIPRDRRTG+SRGFA
Sbjct: 1 MSHFGRAGPPDIRDTYSLLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLL 106
FVRYKYADEAQKA++RLDGR VDGR I VQ AKYG N E I G +
Sbjct: 61 FVRYKYADEAQKAIERLDGRTVDGRNIVVQSAKYGRNDEPIHRGRI 106
>gi|302820371|ref|XP_002991853.1| hypothetical protein SELMODRAFT_134332 [Selaginella moellendorffii]
gi|302822709|ref|XP_002993011.1| hypothetical protein SELMODRAFT_136271 [Selaginella moellendorffii]
gi|300139211|gb|EFJ05957.1| hypothetical protein SELMODRAFT_136271 [Selaginella moellendorffii]
gi|300140391|gb|EFJ07115.1| hypothetical protein SELMODRAFT_134332 [Selaginella moellendorffii]
Length = 101
Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 83/101 (82%), Positives = 94/101 (93%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGR+GPPDI DTYSLLVLNITFRTTADDL+PLFD+YGKVVDIFIPRDRR+G+SRGFA
Sbjct: 1 MSHFGRAGPPDIRDTYSLLVLNITFRTTADDLYPLFDRYGKVVDIFIPRDRRSGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERI 101
FVRYK+ DEAQKA+DRLDG +DGR+I VQFAKYG N E++
Sbjct: 61 FVRYKHVDEAQKAIDRLDGMTIDGRQIAVQFAKYGRNDEKM 101
>gi|448878202|gb|AGE46064.1| arginine/serine-rich splicing factor SC30 transcript III [Zea mays]
Length = 293
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 91/144 (63%), Positives = 100/144 (69%), Gaps = 37/144 (25%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFR---------------------------------- 26
MSHFGRSGPPDI DT+SLLVLNI+FR
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFREGDLTLAPPAPPTLPTLSLPLSLIASFSYPSPPR 60
Query: 27 ---TTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDGRVVD 83
TTADDLFPLF++YGKVVD+FIPRDRRTGDSRGFAFVRYKYADEAQKA+DRLDGR VD
Sbjct: 61 FTGTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDRLDGRDVD 120
Query: 84 GREITVQFAKYGPNAERIKEGLLN 107
GR I VQFAKYGPNAE I++G +
Sbjct: 121 GRNIMVQFAKYGPNAEPIRKGRVK 144
>gi|195612902|gb|ACG28281.1| splicing factor, arginine/serine-rich 2 [Zea mays]
gi|414869216|tpg|DAA47773.1| TPA: splicing factor, arginine/serine-rich 2 [Zea mays]
gi|448878194|gb|AGE46060.1| arginine/serine-rich splicing factor SC32 transcript II [Zea mays]
Length = 248
Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 84/105 (80%), Positives = 94/105 (89%), Gaps = 3/105 (2%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGR+GPPDI DT+SLLVLNI+FRTTADDLFPLF++ GKVVD+FIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRTGPPDIRDTFSLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGL 105
FVRYKYADEAQKA+DRLDGR VDGR I VQFA + R+KEG+
Sbjct: 61 FVRYKYADEAQKAIDRLDGRNVDGRNIMVQFANH---KGRVKEGV 102
>gi|414869213|tpg|DAA47770.1| TPA: hypothetical protein ZEAMMB73_478975 [Zea mays]
Length = 283
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 90/137 (65%), Positives = 99/137 (72%), Gaps = 32/137 (23%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGR+GPPDI DT+SLLVLNI+FRTTADDLFPLF++ GKVVD+FIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRTGPPDIRDTFSLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLD---------------------------GRVVDGREITVQFAK 93
FVRYKYADEAQKA+DRLD GR VDGR I VQFAK
Sbjct: 61 FVRYKYADEAQKAIDRLDGGFFFDCAPHVGILELLFLIIVDFLGAGRNVDGRNIMVQFAK 120
Query: 94 YGPNA-----ERIKEGL 105
YGPNA R+KEG+
Sbjct: 121 YGPNAVPIHKGRVKEGV 137
>gi|224035925|gb|ACN37038.1| unknown [Zea mays]
gi|448878196|gb|AGE46061.1| arginine/serine-rich splicing factor SC32 transcript III [Zea mays]
Length = 284
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/138 (65%), Positives = 99/138 (71%), Gaps = 33/138 (23%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGR+GPPDI DT+SLLVLNI+FRTTADDLFPLF++ GKVVD+FIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRTGPPDIRDTFSLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLD----------------------------GRVVDGREITVQFA 92
FVRYKYADEAQKA+DRLD GR VDGR I VQFA
Sbjct: 61 FVRYKYADEAQKAIDRLDGGFFFFDCAPHVGILELLFLIIVDFLGAGRNVDGRNIMVQFA 120
Query: 93 KYGPNA-----ERIKEGL 105
KYGPNA R+KEG+
Sbjct: 121 KYGPNAVPIHKGRVKEGV 138
>gi|218192960|gb|EEC75387.1| hypothetical protein OsI_11855 [Oryza sativa Indica Group]
Length = 218
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 81/106 (76%), Positives = 92/106 (86%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS GR GPP + D+YSLLVLN++FRTTADDL LFD+ G+V+DI IPRDRRTGDSRGFA
Sbjct: 1 MSRLGRYGPPAVRDSYSLLVLNVSFRTTADDLLALFDRCGEVLDIRIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLL 106
FVRYKY DEAQKAVD+LDGR VDGR+I VQFAKYGPNAERI +G +
Sbjct: 61 FVRYKYEDEAQKAVDKLDGRTVDGRDIMVQFAKYGPNAERIHKGRI 106
>gi|115453325|ref|NP_001050263.1| Os03g0388000 [Oryza sativa Japonica Group]
gi|50582745|gb|AAT78815.1| putative splicing factor (having alternative splicing products)
[Oryza sativa Japonica Group]
gi|108708536|gb|ABF96331.1| Arginine/serine-rich splicing factor, putative, expressed [Oryza
sativa Japonica Group]
gi|113548734|dbj|BAF12177.1| Os03g0388000 [Oryza sativa Japonica Group]
gi|222625042|gb|EEE59174.1| hypothetical protein OsJ_11097 [Oryza sativa Japonica Group]
Length = 205
Score = 170 bits (431), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 81/106 (76%), Positives = 92/106 (86%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS GR GPP + D+YSLLVLN++FRTTADDL LFD+ G+V+DI IPRDRRTGDSRGFA
Sbjct: 1 MSRLGRYGPPAVRDSYSLLVLNVSFRTTADDLLALFDRCGEVLDIRIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLL 106
FVRYKY DEAQKAVD+LDGR VDGR+I VQFAKYGPNAERI +G +
Sbjct: 61 FVRYKYEDEAQKAVDKLDGRTVDGRDIMVQFAKYGPNAERIHKGRI 106
>gi|108708538|gb|ABF96333.1| Arginine/serine-rich splicing factor, putative, expressed [Oryza
sativa Japonica Group]
Length = 206
Score = 170 bits (431), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 81/106 (76%), Positives = 92/106 (86%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS GR GPP + D+YSLLVLN++FRTTADDL LFD+ G+V+DI IPRDRRTGDSRGFA
Sbjct: 1 MSRLGRYGPPAVRDSYSLLVLNVSFRTTADDLLALFDRCGEVLDIRIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLL 106
FVRYKY DEAQKAVD+LDGR VDGR+I VQFAKYGPNAERI +G +
Sbjct: 61 FVRYKYEDEAQKAVDKLDGRTVDGRDIMVQFAKYGPNAERIHKGRI 106
>gi|448878413|gb|AGE46169.1| arginine/serine-rich splicing factor SC39 transcript III
[Physcomitrella patens subsp. patens]
Length = 104
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/90 (86%), Positives = 86/90 (95%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGR+GPPDI DTYSLLVLNITFRT+ADDL+PLFD+YGKVVDIFIPRDRRTG+SRGFA
Sbjct: 1 MSHFGRAGPPDIRDTYSLLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQ 90
FVRYKY+DEAQKA++RLDGR VDGR I VQ
Sbjct: 61 FVRYKYSDEAQKAIERLDGRAVDGRNIVVQ 90
>gi|448878411|gb|AGE46168.1| arginine/serine-rich splicing factor SC39 transcript II
[Physcomitrella patens subsp. patens]
Length = 167
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 77/92 (83%), Positives = 85/92 (92%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGR+GPPDI DTYSLLVLNITFRT+ADDL+PLFD+YGKVVDIFIPRDRRTG+SRGFA
Sbjct: 1 MSHFGRAGPPDIRDTYSLLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFA 92
FVRYKY+DEAQKA++RLDGR VDGR I F
Sbjct: 61 FVRYKYSDEAQKAIERLDGRAVDGRNIVDLFG 92
>gi|302765723|ref|XP_002966282.1| hypothetical protein SELMODRAFT_7952 [Selaginella moellendorffii]
gi|302793049|ref|XP_002978290.1| hypothetical protein SELMODRAFT_7949 [Selaginella moellendorffii]
gi|300154311|gb|EFJ20947.1| hypothetical protein SELMODRAFT_7949 [Selaginella moellendorffii]
gi|300165702|gb|EFJ32309.1| hypothetical protein SELMODRAFT_7952 [Selaginella moellendorffii]
Length = 92
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/91 (86%), Positives = 85/91 (93%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
PPDI DTYSLLVLNITFRT+ADDLFPLFD+YGKVVDIFIPRDRRTGDSRGFAFVRYK+AD
Sbjct: 1 PPDIRDTYSLLVLNITFRTSADDLFPLFDRYGKVVDIFIPRDRRTGDSRGFAFVRYKHAD 60
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYGPNAE 99
EAQKA++RLDG+ VDGR I VQFAKYG N E
Sbjct: 61 EAQKAIERLDGKNVDGRNIVVQFAKYGRNDE 91
>gi|448878220|gb|AGE46073.1| arginine/serine-rich splicing factor SC26 transcript II [Zea mays]
Length = 129
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/116 (65%), Positives = 91/116 (78%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS FGRSG P+ +++SLLVLN++FRTTADDLFPLFD+YGKV+DI+IPRD RTGD RGFA
Sbjct: 3 MSRFGRSGQPENRESFSLLVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFA 62
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDRSTGQ 116
FVRY Y DEAQ A+D LDG DGR + VQFAKYGPNAE+I G + + G+
Sbjct: 63 FVRYNYEDEAQDAIDGLDGMRFDGRALMVQFAKYGPNAEKIHRGRITEENPKPRGR 118
>gi|226496531|ref|NP_001152123.1| splicing factor, arginine/serine-rich 2 [Zea mays]
gi|195652939|gb|ACG45937.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 161
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 75/104 (72%), Positives = 87/104 (83%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS FGRSG P+ +++SLLVLN++FRTTADDLFPLFD+YGKV+DI+IPRD RTGD RGFA
Sbjct: 1 MSRFGRSGQPENRESFSLLVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEG 104
FVRY Y DEAQ A+D LDG DGR + VQFAKYGPNAE+I G
Sbjct: 61 FVRYNYEDEAQDAIDGLDGMRFDGRALMVQFAKYGPNAEKIHRG 104
>gi|242035597|ref|XP_002465193.1| hypothetical protein SORBIDRAFT_01g033710 [Sorghum bicolor]
gi|241919047|gb|EER92191.1| hypothetical protein SORBIDRAFT_01g033710 [Sorghum bicolor]
Length = 216
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 77/106 (72%), Positives = 88/106 (83%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS FGRSG P+ DT+SLLVLN++FRTTADDLFPLFD+YG+VVDI IPRDRRTG+SRGFA
Sbjct: 1 MSRFGRSGHPENRDTFSLLVLNVSFRTTADDLFPLFDRYGEVVDIHIPRDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLL 106
FVRY Y DEAQ A+D LDG GR + VQFAKYGPNAE+I G +
Sbjct: 61 FVRYNYEDEAQDAIDGLDGMRFGGRALMVQFAKYGPNAEKIHRGRI 106
>gi|414867082|tpg|DAA45639.1| TPA: splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 216
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 75/106 (70%), Positives = 88/106 (83%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS FGRSG P+ +++SLLVLN++FRTTADDLFPLFD+YGKV+DI+IPRD RTGD RGFA
Sbjct: 1 MSRFGRSGQPENRESFSLLVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLL 106
FVRY Y DEAQ A+D LDG DGR + VQFAKYGPNAE+I G +
Sbjct: 61 FVRYNYEDEAQDAIDGLDGMRFDGRALMVQFAKYGPNAEKIHRGRI 106
>gi|414867083|tpg|DAA45640.1| TPA: hypothetical protein ZEAMMB73_077445 [Zea mays]
gi|448878222|gb|AGE46074.1| arginine/serine-rich splicing factor SC26 transcript III [Zea mays]
Length = 198
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 75/106 (70%), Positives = 88/106 (83%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS FGRSG P+ +++SLLVLN++FRTTADDLFPLFD+YGKV+DI+IPRD RTGD RGFA
Sbjct: 1 MSRFGRSGQPENRESFSLLVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLL 106
FVRY Y DEAQ A+D LDG DGR + VQFAKYGPNAE+I G +
Sbjct: 61 FVRYNYEDEAQDAIDGLDGMRFDGRALMVQFAKYGPNAEKIHRGRI 106
>gi|226501776|ref|NP_001148421.1| LOC100282036 [Zea mays]
gi|195619182|gb|ACG31421.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 218
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/106 (68%), Positives = 88/106 (83%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS FGRSG P+ +++S+LVLN++FRTTADDLFPLFD+YGKV+DI+IPRD RTGD RGFA
Sbjct: 3 MSRFGRSGQPENRESFSILVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFA 62
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLL 106
FVRY Y DEA+ A+D LDG DGR + VQFAKYGPNAE+I G +
Sbjct: 63 FVRYNYEDEARDAIDGLDGXRFDGRALMVQFAKYGPNAEKIHRGRI 108
>gi|448878218|gb|AGE46072.1| arginine/serine-rich splicing factor SC26 transcript I [Zea mays]
Length = 218
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/116 (63%), Positives = 91/116 (78%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS FGRSG P+ +++S+LVLN++FRTTADDLFPLFD+YGKV+DI+IPRD RTGD RGFA
Sbjct: 3 MSRFGRSGQPENRESFSILVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFA 62
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDRSTGQ 116
FVRY Y DEA+ A+D LDG DGR + VQFAKYGPNAE+I G + + G+
Sbjct: 63 FVRYNYEDEARDAIDGLDGMRFDGRALMVQFAKYGPNAEKIHRGRITEENPKPRGR 118
>gi|297789035|ref|XP_002862530.1| hypothetical protein ARALYDRAFT_920582 [Arabidopsis lyrata subsp.
lyrata]
gi|297308107|gb|EFH38788.1| hypothetical protein ARALYDRAFT_920582 [Arabidopsis lyrata subsp.
lyrata]
Length = 116
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/81 (88%), Positives = 78/81 (96%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSHFGRSGPPDI+DTYSLLVLNITFRTTADDL+PLF KYGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRV 81
FVRYKY DEA KAV+RLDG++
Sbjct: 61 FVRYKYKDEAHKAVERLDGKI 81
>gi|452822795|gb|EME29811.1| splicing factor, arginine/serine-rich 2 [Galdieria sulphuraria]
Length = 211
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 63/89 (70%), Positives = 78/89 (87%)
Query: 6 RSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYK 65
R+GPPDI+ TYSLLVLNI+FRTT +DL PLFDKYG+VVD +IPR+RR G SRGFAFVR++
Sbjct: 17 RTGPPDISGTYSLLVLNISFRTTPNDLTPLFDKYGEVVDCYIPRNRRNGHSRGFAFVRFR 76
Query: 66 YADEAQKAVDRLDGRVVDGREITVQFAKY 94
++A+KA++ +DGR VDGR ITVQFAKY
Sbjct: 77 KEEDARKAMEEMDGREVDGRSITVQFAKY 105
>gi|448878316|gb|AGE46121.1| arginine/serine-rich splicing factor SC30 transcript II [Sorghum
bicolor]
Length = 188
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/61 (90%), Positives = 58/61 (95%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS FGRSGPP I DTYSLLVLNITFRTTADDLFPLFDKYG++VDI+IPRDRRTGDSRGFA
Sbjct: 1 MSRFGRSGPPPIRDTYSLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFA 60
Query: 61 F 61
F
Sbjct: 61 F 61
>gi|147792441|emb|CAN70275.1| hypothetical protein VITISV_028726 [Vitis vinifera]
Length = 246
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/55 (89%), Positives = 53/55 (96%)
Query: 52 RTGDSRGFAFVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLL 106
RTG+SRGFAFVRYKYADEAQKAVDRLDGR+VDGREITVQFAKYGPNAERI +G +
Sbjct: 7 RTGESRGFAFVRYKYADEAQKAVDRLDGRIVDGREITVQFAKYGPNAERIHKGRI 61
>gi|157125941|ref|XP_001654458.1| serine/arginine rich splicing factor [Aedes aegypti]
gi|157125943|ref|XP_001654459.1| serine/arginine rich splicing factor [Aedes aegypti]
gi|94469018|gb|ABF18358.1| predicted splicing factor [Aedes aegypti]
gi|108873468|gb|EAT37693.1| AAEL010340-PA [Aedes aegypti]
gi|108873469|gb|EAT37694.1| AAEL010340-PB [Aedes aegypti]
Length = 177
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 70/95 (73%), Gaps = 1/95 (1%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS +GR PP I SL V N+T+RTT DDL +F++ G+V DI+IPRDR T +SRGFA
Sbjct: 1 MSSYGRP-PPRIDGMISLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRHTRESRGFA 59
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
FVR+ +AQ A+D +DGR++DGRE+ VQ A+YG
Sbjct: 60 FVRFYDKRDAQDALDAMDGRMLDGRELRVQMARYG 94
>gi|291224278|ref|XP_002732132.1| PREDICTED: splicing factor, arginine/serine-rich 2-like
[Saccoglossus kowalevskii]
Length = 230
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 65/88 (73%)
Query: 8 GPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYA 67
GPP+I +SL V N+T+RTT +DL F+KYG V D++IPRDR T +SRGFAFVRY
Sbjct: 6 GPPEIEGMHSLKVDNLTYRTTPEDLRRCFEKYGDVGDVYIPRDRFTRESRGFAFVRYYDK 65
Query: 68 DEAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG +DGRE+ VQ A+YG
Sbjct: 66 RDAEDALDAMDGATLDGRELRVQMARYG 93
>gi|170041667|ref|XP_001848576.1| serine/arginine rich splicing factor [Culex quinquefasciatus]
gi|167865236|gb|EDS28619.1| serine/arginine rich splicing factor [Culex quinquefasciatus]
Length = 186
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 70/95 (73%), Gaps = 1/95 (1%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS +GR PP I SL V N+T+RTT DDL +F++ G+V DI+IPRDR T +SRGFA
Sbjct: 1 MSSYGRP-PPRIDGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRHTRESRGFA 59
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
FVR+ +AQ A+D +DGR++DGRE+ VQ A+YG
Sbjct: 60 FVRFYDKRDAQDALDAMDGRMLDGRELRVQMARYG 94
>gi|426346592|ref|XP_004040960.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla gorilla
gorilla]
Length = 241
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 73/103 (70%), Gaps = 3/103 (2%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG--PNAERIKEG 104
+ +A+ A+D +DG V+DGRE+ VQ A+YG P++ + G
Sbjct: 62 FHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRG 104
>gi|221117570|ref|XP_002161458.1| PREDICTED: uncharacterized protein LOC100200042 isoform 2 [Hydra
magnipapillata]
Length = 195
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 65/91 (71%)
Query: 5 GRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRY 64
G GPP I SL V N+T+RT+ +DL F KYG++ DI+IPRDR T +SRGFAFVRY
Sbjct: 7 GSRGPPQIEGMVSLKVDNLTYRTSMEDLERYFKKYGELGDIYIPRDRNTHESRGFAFVRY 66
Query: 65 KYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG+V+DGREI V A+YG
Sbjct: 67 YEERDAEDAMDSMDGKVIDGREIRVAMARYG 97
>gi|426346596|ref|XP_004040962.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla gorilla
gorilla]
Length = 221
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 73/103 (70%), Gaps = 3/103 (2%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG--PNAERIKEG 104
+ +A+ A+D +DG V+DGRE+ VQ A+YG P++ + G
Sbjct: 62 FHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRG 104
>gi|26345390|dbj|BAC36346.1| unnamed protein product [Mus musculus]
Length = 254
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ +A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 62 FHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|172046472|emb|CAQ34908.1| SR family splicing factor SC35 [Chironomus tentans]
Length = 167
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 69/95 (72%), Gaps = 1/95 (1%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS+ R GPP I SL V N+T+RTT +DL +F++ G V DI+IPRDR T +SRGFA
Sbjct: 1 MSYSAR-GPPKIEGMISLKVDNLTYRTTPEDLRRVFERCGSVGDIYIPRDRHTRESRGFA 59
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
FVR+ +A++A+ +DGRV+DGRE+ VQ A+YG
Sbjct: 60 FVRFYEKRDAEEALQEMDGRVLDGRELRVQMARYG 94
>gi|297701877|ref|XP_002827924.1| PREDICTED: uncharacterized protein LOC100439801 isoform 2 [Pongo
abelii]
Length = 287
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 69 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 127
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ +A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 128 FHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 159
>gi|426346594|ref|XP_004040961.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla gorilla
gorilla]
Length = 219
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 73/103 (70%), Gaps = 3/103 (2%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG--PNAERIKEG 104
+ +A+ A+D +DG V+DGRE+ VQ A+YG P++ + G
Sbjct: 62 FHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRG 104
>gi|170579742|ref|XP_001894964.1| ADP-ribose pyrophosphatase, mitochondrial precursor [Brugia malayi]
gi|158598261|gb|EDP36190.1| ADP-ribose pyrophosphatase, mitochondrial precursor, putative
[Brugia malayi]
Length = 401
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 67/100 (67%), Gaps = 1/100 (1%)
Query: 6 RSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYK 65
R GPP I YSL + NI+++T DL LF+KYG++ DI IPRDR T S+GF FVR+
Sbjct: 280 RPGPPSIDGLYSLKIDNISYQTAPQDLRRLFEKYGEIGDIHIPRDRYTKQSKGFGFVRFY 339
Query: 66 YADEAQKAVDRLDGRVVDGREITVQFAKY-GPNAERIKEG 104
+A+ A+DR+DGR VDGREI V A+Y P ER + G
Sbjct: 340 SRRDAEYAMDRMDGRWVDGREIRVAMARYERPIDERSRNG 379
>gi|355568958|gb|EHH25239.1| hypothetical protein EGK_09022 [Macaca mulatta]
Length = 222
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ +A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 62 FHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|358331785|dbj|GAA50546.1| serine/arginine-rich splicing factor 2 [Clonorchis sinensis]
Length = 340
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 70/103 (67%), Gaps = 2/103 (1%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
M + +S PP I SL V N+ +RTT +DL +F +YG+V D++IPRD T +SRGFA
Sbjct: 1 MERYAKS-PPRIEGMVSLKVDNLAYRTTIEDLRRVFSRYGEVGDVYIPRDPYTFESRGFA 59
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG-PNAERIK 102
FVRY EA A+ +DGR +DGREI VQ AKYG PN+ R++
Sbjct: 60 FVRYPTDREADSAIREMDGRRIDGREIRVQRAKYGRPNSRRMR 102
>gi|387018630|gb|AFJ51433.1| Serine/arginine-rich splicing factor 2 [Crotalus adamanteus]
Length = 221
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 73/103 (70%), Gaps = 3/103 (2%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG--PNAERIKEG 104
+ +A+ A+D +DG V+DGRE+ VQ A+YG P++ + G
Sbjct: 62 FHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRG 104
>gi|224074970|ref|XP_002194754.1| PREDICTED: serine/arginine-rich splicing factor 2 [Taeniopygia
guttata]
Length = 221
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 73/103 (70%), Gaps = 3/103 (2%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG--PNAERIKEG 104
+ +A+ A+D +DG V+DGRE+ VQ A+YG P++ + G
Sbjct: 62 FHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRG 104
>gi|148702654|gb|EDL34601.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_a
[Mus musculus]
Length = 241
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ +A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 62 FHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|324510397|gb|ADY44347.1| Splicing factor, arginine/serine-rich 4 [Ascaris suum]
gi|324520781|gb|ADY47708.1| Splicing factor, arginine/serine-rich 4 [Ascaris suum]
Length = 122
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 63/89 (70%)
Query: 6 RSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYK 65
R GPP I YSL + NI+++TT DL LF+KYG++ DI IPRDR T S+GF FVRY
Sbjct: 4 RPGPPSIDGLYSLKIDNISYQTTPQDLRRLFEKYGEIGDIHIPRDRYTKQSKGFGFVRYY 63
Query: 66 YADEAQKAVDRLDGRVVDGREITVQFAKY 94
+A+ A+DR+DGR +DGREI V A+Y
Sbjct: 64 SRRDAEYAMDRMDGRWIDGREIRVALARY 92
>gi|405967042|gb|EKC32256.1| Splicing factor, arginine/serine-rich 2 [Crassostrea gigas]
Length = 183
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 71/101 (70%), Gaps = 1/101 (0%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR GPP+I SL V N+T+RTT +DL FDKYG V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGR-GPPEIDGMTSLKVDNLTYRTTPEDLRRAFDKYGDVGDVYIPRDRFTRESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEG 104
+ +A+ A+D +DG ++DGRE+ VQ A+YG E + G
Sbjct: 62 FYDKRDAEDALDSMDGAIMDGRELRVQMARYGRPTEPYRRG 102
>gi|47604918|ref|NP_001001305.1| serine/arginine-rich splicing factor 2 [Gallus gallus]
gi|266991|sp|P30352.1|SRSF2_CHICK RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Protein PR264; AltName: Full=Splicing component, 35
kDa; AltName: Full=Splicing factor SC35; Short=SC-35;
AltName: Full=Splicing factor, arginine/serine-rich 2
gi|63752|emb|CAA44306.1| PR 264 [Gallus gallus]
gi|228503|prf||1805195A RNA-binding protein PR264
Length = 221
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 73/103 (70%), Gaps = 3/103 (2%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG--PNAERIKEG 104
+ +A+ A+D +DG V+DGRE+ VQ A+YG P++ + G
Sbjct: 62 FHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRG 104
>gi|358009411|pdb|2LEA|A Chain A, Solution Structure Of Human Srsf2 (Sc35) Rrm
gi|358009412|pdb|2LEB|A Chain A, Solution Structure Of Human Srsf2 (Sc35) Rrm In Complex
With 5'- Uccagu-3'
gi|358009414|pdb|2LEC|A Chain A, Solution Structure Of Human Srsf2 (Sc35) Rrm In Complex
With 5'- Uggagu-3'
Length = 135
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 37 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 95
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ +A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 96 FHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 127
>gi|77627748|ref|NP_001029290.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|60414777|sp|Q5R1W5.3|SRSF2_PANTR RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing
factor, arginine/serine-rich 2
gi|56342346|dbj|BAD74033.1| arginine/serine-rich 2 splicing factor [Pan troglodytes verus]
Length = 221
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ +A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 62 FHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|62898065|dbj|BAD96972.1| splicing factor, arginine/serine-rich 2 variant [Homo sapiens]
Length = 221
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ +A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 62 FHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|327264866|ref|XP_003217232.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Anolis
carolinensis]
Length = 221
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 73/103 (70%), Gaps = 3/103 (2%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG--PNAERIKEG 104
+ +A+ A+D +DG V+DGRE+ VQ A+YG P++ + G
Sbjct: 62 FHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRG 104
>gi|355718912|gb|AES06428.1| splicing factor, arginine/serine-rich 2 [Mustela putorius furo]
Length = 108
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 73/103 (70%), Gaps = 3/103 (2%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG--PNAERIKEG 104
+ +A+ A+D +DG V+DGRE+ VQ A+YG P++ + G
Sbjct: 62 FHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRG 104
>gi|403280479|ref|XP_003931745.1| PREDICTED: uncharacterized protein LOC101052045 [Saimiri
boliviensis boliviensis]
Length = 209
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ +A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 62 FHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|359320233|ref|XP_003639286.1| PREDICTED: serine/arginine-rich splicing factor 2-like isoform 1
[Canis lupus familiaris]
gi|359320235|ref|XP_003639287.1| PREDICTED: serine/arginine-rich splicing factor 2-like isoform 2
[Canis lupus familiaris]
Length = 221
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ +A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 62 FHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|116175283|ref|NP_001070697.1| serine/arginine-rich splicing factor 2 [Sus scrofa]
gi|122131841|sp|Q06A98.1|SRSF2_PIG RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing
factor, arginine/serine-rich 2
gi|115371755|gb|ABI96202.1| SFRS2 [Sus scrofa]
Length = 221
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ +A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 62 FHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|426346598|ref|XP_004040963.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla
gorilla gorilla]
Length = 206
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ +A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 62 FHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|332260181|ref|XP_003279164.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 2 [Nomascus leucogenys]
Length = 221
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ +A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 62 FHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|6755478|ref|NP_035488.1| serine/arginine-rich splicing factor 2 [Mus musculus]
gi|47271443|ref|NP_003007.2| serine/arginine-rich splicing factor 2 [Homo sapiens]
gi|57528425|ref|NP_001009720.1| serine/arginine-rich splicing factor 2 [Rattus norvegicus]
gi|77735589|ref|NP_001029490.1| serine/arginine-rich splicing factor 2 [Bos taurus]
gi|299758481|ref|NP_001177668.1| splicing factor, arginine/serine-rich 2 [Macaca mulatta]
gi|306482646|ref|NP_001182356.1| serine/arginine-rich splicing factor 2 [Homo sapiens]
gi|126308709|ref|XP_001371367.1| PREDICTED: serine/arginine-rich splicing factor 2-like
[Monodelphis domestica]
gi|296203283|ref|XP_002748811.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 1
[Callithrix jacchus]
gi|395825870|ref|XP_003786143.1| PREDICTED: serine/arginine-rich splicing factor 2 [Otolemur
garnettii]
gi|397494981|ref|XP_003818344.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 1 [Pan
paniscus]
gi|397494983|ref|XP_003818345.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 2 [Pan
paniscus]
gi|402901195|ref|XP_003913541.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 1
[Papio anubis]
gi|402901197|ref|XP_003913542.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 2
[Papio anubis]
gi|402901199|ref|XP_003913543.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 3
[Papio anubis]
gi|402901201|ref|XP_003913544.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 4
[Papio anubis]
gi|18280933|sp|Q62093.4|SRSF2_MOUSE RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Protein PR264; AltName: Full=Putative myelin
regulatory factor 1; Short=MRF-1; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing
factor, arginine/serine-rich 2
gi|52783335|sp|Q6PDU1.3|SRSF2_RAT RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing
factor, arginine/serine-rich 2
gi|60416437|sp|Q01130.4|SRSF2_HUMAN RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Protein PR264; AltName: Full=Splicing component,
35 kDa; AltName: Full=Splicing factor SC35;
Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|110287957|sp|Q3MHR5.3|SRSF2_BOVIN RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing
factor, arginine/serine-rich 2
gi|539663|pir||A42701 splicing factor SFRS2 - human
gi|35597|emb|CAA44307.1| PR 264 [Homo sapiens]
gi|455419|emb|CAA53383.1| PR264/SC35 [Homo sapiens]
gi|3335676|gb|AAC71000.1| splicing factor SC35 [Mus musculus]
gi|12653143|gb|AAH00339.1| SFRS2 protein [Homo sapiens]
gi|12654915|gb|AAH01303.1| SFRS2 protein [Homo sapiens]
gi|13529557|gb|AAH05493.1| Sfrs2 protein [Mus musculus]
gi|26351947|dbj|BAC39610.1| unnamed protein product [Mus musculus]
gi|26352962|dbj|BAC40111.1| unnamed protein product [Mus musculus]
gi|30583339|gb|AAP35914.1| splicing factor, arginine/serine-rich 2 [Homo sapiens]
gi|34849641|gb|AAH58508.1| Splicing factor, arginine/serine-rich 2 [Rattus norvegicus]
gi|47123339|gb|AAH70086.1| Splicing factor, arginine/serine-rich 2 [Homo sapiens]
gi|61359244|gb|AAX41688.1| splicing factor arginine/serine-rich 2 [synthetic construct]
gi|67969334|dbj|BAE01019.1| unnamed protein product [Macaca fascicularis]
gi|74227066|dbj|BAE38330.1| unnamed protein product [Mus musculus]
gi|75775273|gb|AAI05139.1| Splicing factor, arginine/serine-rich 2 [Bos taurus]
gi|90076288|dbj|BAE87824.1| unnamed protein product [Macaca fascicularis]
gi|119609845|gb|EAW89439.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|119609846|gb|EAW89440.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|119609851|gb|EAW89445.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|119609853|gb|EAW89447.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|123980614|gb|ABM82136.1| splicing factor, arginine/serine-rich 2 [synthetic construct]
gi|123995435|gb|ABM85319.1| splicing factor, arginine/serine-rich 2 [synthetic construct]
gi|148702655|gb|EDL34602.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_b
[Mus musculus]
gi|148702656|gb|EDL34603.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_b
[Mus musculus]
gi|149054884|gb|EDM06701.1| similar to splicing factor, arginine/serine-rich 2, isoform CRA_a
[Rattus norvegicus]
gi|149054885|gb|EDM06702.1| similar to splicing factor, arginine/serine-rich 2, isoform CRA_a
[Rattus norvegicus]
gi|149054887|gb|EDM06704.1| similar to splicing factor, arginine/serine-rich 2, isoform CRA_a
[Rattus norvegicus]
gi|168277776|dbj|BAG10866.1| splicing factor, arginine/serine-rich 2 [synthetic construct]
gi|193784944|dbj|BAG54097.1| unnamed protein product [Homo sapiens]
gi|296476083|tpg|DAA18198.1| TPA: splicing factor, arginine/serine-rich 2 [Bos taurus]
gi|380782971|gb|AFE63361.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|380815556|gb|AFE79652.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|384941848|gb|AFI34529.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|384948766|gb|AFI37988.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|410226692|gb|JAA10565.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410226694|gb|JAA10566.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410262826|gb|JAA19379.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410262828|gb|JAA19380.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410299756|gb|JAA28478.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410299760|gb|JAA28480.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410299766|gb|JAA28483.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410338225|gb|JAA38059.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410338227|gb|JAA38060.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410338229|gb|JAA38061.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410338231|gb|JAA38062.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410338233|gb|JAA38063.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|228504|prf||1805195B RNA-binding protein PR264
Length = 221
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ +A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 62 FHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|397494985|ref|XP_003818346.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 3 [Pan
paniscus]
gi|119609854|gb|EAW89448.1| splicing factor, arginine/serine-rich 2, isoform CRA_g [Homo
sapiens]
gi|194387574|dbj|BAG60151.1| unnamed protein product [Homo sapiens]
Length = 209
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ +A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 62 FHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|312373610|gb|EFR21320.1| hypothetical protein AND_17210 [Anopheles darlingi]
Length = 170
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 76/110 (69%), Gaps = 2/110 (1%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS + R PP I SL V N+T+RTT DDL +F++ G+V DI+IPRDR T +SRGFA
Sbjct: 1 MSGYARP-PPRIDGMISLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRHTRESRGFA 59
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG-PNAERIKEGLLNHS 109
FVR+ +A+ A+D +DGR++DGRE+ VQ A+YG P + + + G H+
Sbjct: 60 FVRFYDKRDAEDALDAMDGRMLDGRELRVQMARYGRPTSPQRRGGGNRHN 109
>gi|90076648|dbj|BAE88004.1| unnamed protein product [Macaca fascicularis]
Length = 210
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ +A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 62 FHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|149478364|ref|XP_001514814.1| PREDICTED: serine/arginine-rich splicing factor 2-like, partial
[Ornithorhynchus anatinus]
Length = 120
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ +A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 62 FHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|1405747|emb|CAA67134.1| PR264/SC35 [Mus musculus]
Length = 121
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ +A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 62 FHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|443730022|gb|ELU15717.1| hypothetical protein CAPTEDRAFT_175255 [Capitella teleta]
Length = 163
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 64/88 (72%)
Query: 8 GPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYA 67
GPP I SL V N+T+RT+ +DL F+KYG+V D++IPRD T +++GFAFVRY
Sbjct: 4 GPPQIEGMVSLKVDNLTYRTSKEDLLQAFEKYGEVGDVYIPRDPYTRENKGFAFVRYYEK 63
Query: 68 DEAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG V+DGRE+ VQ AKYG
Sbjct: 64 RDAEDAIDSMDGAVLDGRELRVQTAKYG 91
>gi|45361503|ref|NP_989328.1| serine/arginine-rich splicing factor 2 [Xenopus (Silurana)
tropicalis]
gi|39794351|gb|AAH64167.1| splicing factor, arginine/serine-rich 2 [Xenopus (Silurana)
tropicalis]
gi|89272888|emb|CAJ82901.1| splicing factor, arginine/serine-rich 2 [Xenopus (Silurana)
tropicalis]
Length = 220
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 73/103 (70%), Gaps = 3/103 (2%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ + L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG--PNAERIKEG 104
+ +A+ A+D +DG V+DGRE+ VQ A+YG P++ + G
Sbjct: 62 FHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHGRRG 104
>gi|156349201|ref|XP_001621959.1| hypothetical protein NEMVEDRAFT_v1g143061 [Nematostella
vectensis]
gi|156381130|ref|XP_001632119.1| predicted protein [Nematostella vectensis]
gi|156208328|gb|EDO29859.1| predicted protein [Nematostella vectensis]
gi|156219170|gb|EDO40056.1| predicted protein [Nematostella vectensis]
Length = 127
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 67/95 (70%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS + GPP+I SL V N+T+RTT +DL +F KYG + DI+IPRDR T +SRGFA
Sbjct: 1 MSFDSQRGPPEIDGMTSLKVDNLTYRTTVEDLKQVFKKYGDLGDIYIPRDRNTHESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
FVR+ +A+ A+D +D ++DGRE+ VQ A+YG
Sbjct: 61 FVRFYEKRDAEDAMDCMDRHLLDGREVRVQMARYG 95
>gi|118790804|ref|XP_318826.3| AGAP009742-PA [Anopheles gambiae str. PEST]
gi|116118108|gb|EAA14228.3| AGAP009742-PA [Anopheles gambiae str. PEST]
Length = 174
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 69/95 (72%), Gaps = 1/95 (1%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS + R PP I SL V N+T+RTT DDL +F++ G+V DI+IPRDR T +SRGFA
Sbjct: 8 MSGYARP-PPRIDGMISLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRHTRESRGFA 66
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
FVR+ +A+ A+D +DGR++DGRE+ VQ A+YG
Sbjct: 67 FVRFYDKRDAEDALDAMDGRMLDGRELRVQMARYG 101
>gi|148230060|ref|NP_001080743.1| serine/arginine-rich splicing factor 2 [Xenopus laevis]
gi|28175397|gb|AAH45229.1| Sfrs2-prov protein [Xenopus laevis]
Length = 215
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 73/103 (70%), Gaps = 3/103 (2%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ + L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG--PNAERIKEG 104
+ +A+ A+D +DG V+DGRE+ VQ A+YG P++ + G
Sbjct: 62 FHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHGRRG 104
>gi|47087067|ref|NP_998547.1| splicing factor, arginine/serine-rich 2 [Danio rerio]
gi|28279759|gb|AAH46045.1| Splicing factor, arginine/serine-rich 2 [Danio rerio]
Length = 225
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 73/103 (70%), Gaps = 3/103 (2%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ + L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG--PNAERIKEG 104
+ +A+ A+D +DG ++DGRE+ VQ A+YG P+A + G
Sbjct: 62 FHDKRDAEDAMDAMDGALLDGRELRVQMARYGRPPDAHYSRRG 104
>gi|223647184|gb|ACN10350.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|223673057|gb|ACN12710.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 212
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ + L +F+KYG+V D++IPRDR T +SRGF+FVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFSFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ +A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 62 FHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|221219380|gb|ACM08351.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|223647188|gb|ACN10352.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|223673061|gb|ACN12712.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 212
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ + L +F+KYG+V D++IPRDR T +SRGF+FVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFSFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ +A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 62 FHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|193784791|dbj|BAG53944.1| unnamed protein product [Homo sapiens]
Length = 195
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 67/92 (72%), Gaps = 1/92 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ +A+ A+D +DG V+D RE+ VQ A+YG
Sbjct: 62 FHDKRDAEDAMDAMDGAVLDARELRVQMARYG 93
>gi|242005811|ref|XP_002423754.1| serine/arginine rich splicing factor, putative [Pediculus humanus
corporis]
gi|212506956|gb|EEB11016.1| serine/arginine rich splicing factor, putative [Pediculus humanus
corporis]
Length = 246
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PP I SL V N+TFRTT DDL +F++ G+V DI+IPRDR + +SRGFAFVR
Sbjct: 50 YGRP-PPRIDGMVSLKVDNLTFRTTPDDLRRVFERCGEVGDIYIPRDRFSRESRGFAFVR 108
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ +A+ A+D +DGR++DGRE+ VQ A+YG
Sbjct: 109 FYDKRDAEDALDAMDGRILDGRELRVQMARYG 140
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 34/48 (70%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRY 64
SL V NI++RT DL +F K+G V D++IPRD+ + SRGFAFV Y
Sbjct: 3 SLKVGNISYRTRTLDLHHIFGKFGDVGDVYIPRDKHSKHSRGFAFVSY 50
>gi|307169015|gb|EFN61874.1| Splicing factor, arginine/serine-rich 2 [Camponotus floridanus]
Length = 208
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PP I SL V N+T+RTT +DL +F++ G+V DI+IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ +A+ A+D +DGR++DGRE+ VQ A+YG
Sbjct: 62 FYDKRDAEDALDAMDGRLLDGRELRVQMARYG 93
>gi|443429415|gb|AGC92700.1| serine/arginine-rich splicing factor 2-like protein [Heliconius
erato]
Length = 168
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PP I SL V N+T+RTT +DL +F++ G V DI+IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGDVGDIYIPRDRYTRESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ +A++A+D LDGR++DGRE+ VQ A+YG
Sbjct: 62 FYDRRDAEEALDSLDGRMLDGRELRVQMARYG 93
>gi|209736008|gb|ACI68873.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 222
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ + L +F+KYG+V D++IPRDR T +SRGF+FVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFSFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ +A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 62 FHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|393910359|gb|EJD75841.1| hypothetical protein LOAG_17093 [Loa loa]
Length = 203
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 62/89 (69%)
Query: 6 RSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYK 65
R GPP I YSL + NI+++T DL LF+KYG++ DI IPRDR T S+GF FVR+
Sbjct: 4 RPGPPSIDGLYSLKIDNISYQTAPQDLRRLFEKYGEIGDIHIPRDRYTKQSKGFGFVRFY 63
Query: 66 YADEAQKAVDRLDGRVVDGREITVQFAKY 94
+A+ A+DR+DGR VDGREI V A+Y
Sbjct: 64 SRRDAEYAMDRMDGRWVDGREIRVAMARY 92
>gi|41946787|gb|AAH65971.1| Zgc:55876 protein [Danio rerio]
Length = 220
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ + L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVDGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ +A+ A+D +DG ++DGRE+ VQ A+YG
Sbjct: 62 FHDKRDAEDAMDAMDGAILDGRELRVQMARYG 93
>gi|337926|gb|AAA60306.1| splicing factor [Homo sapiens]
Length = 221
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 67/92 (72%), Gaps = 1/92 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ D L +F+KY +V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYRRVGDVYIPRDRYTKESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ +A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 62 FHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|357608819|gb|EHJ66166.1| putative serine/arginine rich splicing factor [Danaus plexippus]
Length = 165
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PP I SL V N+T+RTT DDL +F++ G V DI+IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPRIDGMVSLKVDNLTYRTTPDDLRRVFERCGDVGDIYIPRDRYTRESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ +A++A+D LDGR++DGRE+ VQ A+YG
Sbjct: 62 FFERRDAEEALDSLDGRMLDGRELRVQMARYG 93
>gi|41054475|ref|NP_955945.1| serine/arginine-rich splicing factor 2b [Danio rerio]
gi|28278933|gb|AAH45480.1| Zgc:55876 [Danio rerio]
Length = 218
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ + L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVDGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ +A+ A+D +DG ++DGRE+ VQ A+YG
Sbjct: 62 FHDKRDAEDAMDAMDGAILDGRELRVQMARYG 93
>gi|348509946|ref|XP_003442507.1| PREDICTED: serine/arginine-rich splicing factor 2-like
[Oreochromis niloticus]
Length = 218
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ + L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVDGMTSLKVDNLTYRTSPEALRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ +A+ A+D +DG ++DGRE+ VQ A+YG
Sbjct: 62 FHDKRDAEDAMDAMDGALLDGRELRVQMARYG 93
>gi|21751099|dbj|BAC03903.1| unnamed protein product [Homo sapiens]
Length = 201
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 67/92 (72%), Gaps = 1/92 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ +A+ A+D +DG V+DGRE+ VQ A+ G
Sbjct: 62 FHDKRDAEDAMDAMDGAVLDGRELRVQMARCG 93
>gi|345486316|ref|XP_003425445.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Nasonia
vitripennis]
Length = 198
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PP I SL V N+T+RTT +DL +F++ G+V DI+IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ +A+ A+D +DGR+VDGRE+ VQ A+YG
Sbjct: 62 FYDKRDAEDALDAMDGRMVDGRELRVQMARYG 93
>gi|348019723|gb|AEP43803.1| SR-protein [Biston betularia]
Length = 152
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 69/92 (75%), Gaps = 1/92 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PP I SL V N+T+RTT +DL +F++ G+V DI+IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ +A++A+D LDGR++DGRE+ VQ A+YG
Sbjct: 62 FYDRRDAEEALDSLDGRMLDGRELRVQMARYG 93
>gi|332373880|gb|AEE62081.1| unknown [Dendroctonus ponderosae]
Length = 168
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PP I SL V N+T+RTT DDL +F++ G+V DI+IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ +A+ A+D +DGR++DGRE+ VQ A+YG
Sbjct: 62 FYDKRDAEDALDAMDGRMLDGRELRVQMARYG 93
>gi|340372565|ref|XP_003384814.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Amphimedon
queenslandica]
Length = 169
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/85 (55%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL V N++FR T D++ P+F+KYG+V DI+IPRD T +SRGFAFVR+ +A+ A++R
Sbjct: 3 SLKVDNLSFRMTPDEIKPIFEKYGEVGDIYIPRDPYTKESRGFAFVRFYEKRDAEDAMER 62
Query: 77 LDGRVVDGREITVQFAKYG-PNAER 100
LDG V+DGRE+ VQ A+YG PN +
Sbjct: 63 LDGYVIDGREMRVQLARYGRPNENK 87
>gi|226423972|gb|ACO53091.1| MIP01221p [Drosophila melanogaster]
Length = 195
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 65/87 (74%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT DDL +F++ G+V DI+IPRDR T +SRGFAFVR+
Sbjct: 16 PPRIDGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKR 75
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A++ +DGR++DGRE+ VQ A+YG
Sbjct: 76 DAEDALEAMDGRMLDGRELRVQMARYG 102
>gi|343961547|dbj|BAK62363.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
Length = 221
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 66/92 (71%), Gaps = 1/92 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ D L + +KYG+V D +IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVSEKYGRVGDAYIPRDRYTKESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ +A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 62 FHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|209155586|gb|ACI34025.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|209732124|gb|ACI66931.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 211
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ + L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ +A+ A+D +DG ++DGRE+ VQ A+YG
Sbjct: 62 FHDNRDAEDAMDAMDGALLDGRELRVQMARYG 93
>gi|114050755|ref|NP_001040152.1| Sr protein [Bombyx mori]
gi|87248221|gb|ABD36163.1| Sr protein [Bombyx mori]
Length = 154
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 69/92 (75%), Gaps = 1/92 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PP I SL V N+T+RTT +DL +F++ G+V DI+IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ +A++A+D +DGR++DGRE+ VQ A+YG
Sbjct: 62 FFERRDAEEALDTMDGRMLDGRELRVQMARYG 93
>gi|348544446|ref|XP_003459692.1| PREDICTED: hypothetical protein LOC100710640 [Oreochromis
niloticus]
Length = 227
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 68/93 (73%), Gaps = 1/93 (1%)
Query: 3 HFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFV 62
+GR PPD+ SL V N+T+RT+ + L +F+KYG+V D++IPRDR T +SRGFAFV
Sbjct: 2 SYGRP-PPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
R+ +A+ A+D +DG ++DGRE+ VQ A+YG
Sbjct: 61 RFLDKRDAEDAMDAMDGALLDGRELRVQMARYG 93
>gi|261335957|emb|CBH09290.1| putative Sr protein [Heliconius melpomene]
Length = 165
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PP I SL V N+T+RTT +DL +F++ G V DI+IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGDVGDIYIPRDRYTRESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ +A++A+D LDGR++DGRE+ VQ A+YG
Sbjct: 62 FYDRRDAEEALDSLDGRMLDGRELRVQMARYG 93
>gi|241020201|ref|XP_002405861.1| IFN-response element binding factor, putative [Ixodes scapularis]
gi|215491811|gb|EEC01452.1| IFN-response element binding factor, putative [Ixodes scapularis]
Length = 194
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 65/92 (70%), Gaps = 1/92 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR GPP I SL V N+T+RTT +DL +F+KYG V D++IPR T DSRGFAFVR
Sbjct: 3 YGR-GPPTIDGMTSLKVDNLTYRTTPEDLKRVFEKYGDVGDVYIPRHPYTRDSRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ + + A+D LDG ++DGRE+ VQ A+YG
Sbjct: 62 FYDKRDGEDAMDALDGYILDGRELRVQMARYG 93
>gi|256092432|ref|XP_002581941.1| serine/arginine rich splicing factor [Schistosoma mansoni]
gi|353230939|emb|CCD77356.1| putative serine/arginine rich splicing factor [Schistosoma mansoni]
Length = 102
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/103 (53%), Positives = 68/103 (66%), Gaps = 4/103 (3%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
M+ +GRS PP I SL V N+ +RTT DDL +F ++G+V DI+IPRD T +SRGFA
Sbjct: 1 MNRYGRS-PPRIDGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFA 59
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG---PNAER 100
FVRY EA A+ +DG VDGRE+ VQ AKYG PN R
Sbjct: 60 FVRYCTDREADCAIRGMDGHKVDGREVRVQRAKYGRPTPNRRR 102
>gi|198474085|ref|XP_001356555.2| GA18884 [Drosophila pseudoobscura pseudoobscura]
gi|198138240|gb|EAL33619.2| GA18884 [Drosophila pseudoobscura pseudoobscura]
Length = 207
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 65/87 (74%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT +DL +F++ G+V DI+IPRDR T +SRGFAFVR+
Sbjct: 16 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKR 75
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A++ +DGR++DGRE+ VQ A+YG
Sbjct: 76 DAEDALEAMDGRMLDGRELRVQMARYG 102
>gi|410929633|ref|XP_003978204.1| PREDICTED: uncharacterized protein LOC101070858 [Takifugu
rubripes]
Length = 229
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ + L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ +A+ A+D +DG ++DGRE+ VQ A+YG
Sbjct: 62 FLDKRDAEDAMDAMDGALLDGRELRVQMARYG 93
>gi|410925942|ref|XP_003976438.1| PREDICTED: uncharacterized protein LOC101074667 [Takifugu
rubripes]
Length = 225
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 68/93 (73%), Gaps = 1/93 (1%)
Query: 3 HFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFV 62
++GR PPD+ SL V N+T+RT + L +F+KYG+V D++IPRDR T +SRGFAFV
Sbjct: 2 NYGRP-PPDVEGMVSLKVDNLTYRTAPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
R+ +A+ A+D +DG ++DGRE+ VQ A+YG
Sbjct: 61 RFFDKRDAEDAMDAMDGALLDGRELRVQMARYG 93
>gi|317419577|emb|CBN81614.1| Splicing factor, arginine/serine-rich 2 [Dicentrarchus labrax]
Length = 228
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ + L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ +A+ A+D +DG ++DGRE+ VQ A+YG
Sbjct: 62 FLDKRDAEDAMDAMDGALLDGRELRVQMARYG 93
>gi|240849499|ref|NP_001155685.1| serine/arginine rich splicing factor-like [Acyrthosiphon pisum]
gi|239790824|dbj|BAH71947.1| ACYPI006902 [Acyrthosiphon pisum]
Length = 153
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 65/87 (74%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT +DL +F++ G+V DI+IPRDR T +SRGFAFVR+
Sbjct: 7 PPRIEGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DGR++DGRE+ VQ A+YG
Sbjct: 67 DAEDALDAMDGRMLDGRELRVQMARYG 93
>gi|195351055|ref|XP_002042052.1| GM26218 [Drosophila sechellia]
gi|195578745|ref|XP_002079224.1| GD22120 [Drosophila simulans]
gi|194123876|gb|EDW45919.1| GM26218 [Drosophila sechellia]
gi|194191233|gb|EDX04809.1| GD22120 [Drosophila simulans]
Length = 195
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 65/87 (74%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT +DL +F++ G+V DI+IPRDR T +SRGFAFVR+
Sbjct: 16 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKR 75
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A++ +DGR++DGRE+ VQ A+YG
Sbjct: 76 DAEDALEAMDGRMLDGRELRVQMARYG 102
>gi|195035777|ref|XP_001989348.1| GH11678 [Drosophila grimshawi]
gi|193905348|gb|EDW04215.1| GH11678 [Drosophila grimshawi]
Length = 203
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 65/87 (74%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT +DL +F++ G+V DI+IPRDR T +SRGFAFVR+
Sbjct: 16 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKR 75
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A++ +DGR++DGRE+ VQ A+YG
Sbjct: 76 DAEDALEAMDGRMLDGRELRVQMARYG 102
>gi|21358099|ref|NP_652612.1| SC35, isoform B [Drosophila melanogaster]
gi|320545008|ref|NP_001188794.1| SC35, isoform C [Drosophila melanogaster]
gi|386769542|ref|NP_001246005.1| SC35, isoform D [Drosophila melanogaster]
gi|7243688|gb|AAF43415.1|AF232775_1 SR family splicing factor SC35 [Drosophila melanogaster]
gi|7297948|gb|AAF53192.1| SC35, isoform B [Drosophila melanogaster]
gi|17862504|gb|AAL39729.1| LD32469p [Drosophila melanogaster]
gi|220944588|gb|ACL84837.1| SC35-PA [synthetic construct]
gi|220954528|gb|ACL89807.1| SC35-PA [synthetic construct]
gi|318068433|gb|ADV37044.1| SC35, isoform C [Drosophila melanogaster]
gi|383291463|gb|AFH03679.1| SC35, isoform D [Drosophila melanogaster]
Length = 195
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 65/87 (74%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT +DL +F++ G+V DI+IPRDR T +SRGFAFVR+
Sbjct: 16 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKR 75
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A++ +DGR++DGRE+ VQ A+YG
Sbjct: 76 DAEDALEAMDGRMLDGRELRVQMARYG 102
>gi|395533366|ref|XP_003768731.1| PREDICTED: serine/arginine-rich splicing factor 2 [Sarcophilus
harrisii]
Length = 224
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 68/95 (71%), Gaps = 4/95 (4%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDK---YGKVVDIFIPRDRRTGDSRGFA 60
+GR PPD+ SL V N+T+RT+ D L +F+K YG+V D++IPRDR T +SRGFA
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKDGRYGRVGDVYIPRDRYTKESRGFA 61
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
FVR+ +A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 62 FVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 96
>gi|443696471|gb|ELT97165.1| hypothetical protein CAPTEDRAFT_18729 [Capitella teleta]
Length = 160
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 66/95 (69%), Gaps = 2/95 (2%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MSH PP+I SL V N+T+RTT +DL F+KYG V D++IPRDR + +SRGFA
Sbjct: 1 MSH--SRTPPNIEGMASLKVDNLTYRTTTEDLRRAFEKYGDVGDVYIPRDRFSHESRGFA 58
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
FVR+ +A A++ +DG V+DGRE+ VQ AKYG
Sbjct: 59 FVRFFDKRDADDAMESMDGAVMDGRELRVQSAKYG 93
>gi|432949878|ref|XP_004084303.1| PREDICTED: uncharacterized protein LOC100049528 [Oryzias latipes]
Length = 239
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ + L +F+KYG+V D++IPRDR + +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYSKESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ +A+ A+D +DG ++DGRE+ VQ A+YG
Sbjct: 62 FFDKRDAEDAMDAMDGALLDGRELRVQMARYG 93
>gi|194861231|ref|XP_001969737.1| GG10262 [Drosophila erecta]
gi|190661604|gb|EDV58796.1| GG10262 [Drosophila erecta]
Length = 195
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 65/87 (74%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT +DL +F++ G+V DI+IPRDR T +SRGFAFVR+
Sbjct: 16 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKR 75
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A++ +DGR++DGRE+ VQ A+YG
Sbjct: 76 DAEDALEAMDGRMLDGRELRVQMARYG 102
>gi|322789593|gb|EFZ14819.1| hypothetical protein SINV_10987 [Solenopsis invicta]
gi|332021256|gb|EGI61641.1| Splicing factor, arginine/serine-rich 2 [Acromyrmex echinatior]
Length = 175
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PP I SL V N+T+RTT +DL +F++ G+V DI+IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ +A+ A+D +DGR++DGRE+ VQ A+YG
Sbjct: 62 FYDKRDAEDALDAMDGRLLDGRELRVQMARYG 93
>gi|307197633|gb|EFN78812.1| Splicing factor, arginine/serine-rich 2 [Harpegnathos saltator]
Length = 175
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PP I SL V N+T+RTT +DL +F++ G+V DI+IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ +A+ A+D +DGR++DGRE+ VQ A+YG
Sbjct: 62 FYDKRDAEDALDAMDGRLLDGRELRVQMARYG 93
>gi|226476662|emb|CAX72223.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
Length = 151
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
M+ +GRS PP I SL V N+ +RTT DDL +F ++G+V DI+IPRD T +SRGFA
Sbjct: 1 MNRYGRS-PPRIDGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFA 59
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
FVRY EA A+ +DG VDGRE+ VQ AKYG
Sbjct: 60 FVRYCTDREADCAIRGMDGHKVDGREVRVQIAKYG 94
>gi|226481931|emb|CAX79231.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
Length = 163
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
M+ +GRS PP I SL V N+ +RTT DDL +F ++G+V DI+IPRD T +SRGFA
Sbjct: 1 MNRYGRS-PPRIDGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFA 59
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
FVRY EA A+ +DG VDGRE+ VQ AKYG
Sbjct: 60 FVRYCTDREADCAIRGMDGHKVDGREVRVQRAKYG 94
>gi|110762781|ref|XP_393352.2| PREDICTED: serine/arginine-rich splicing factor 2-like [Apis
mellifera]
gi|340724784|ref|XP_003400761.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Bombus
terrestris]
gi|350398198|ref|XP_003485116.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Bombus
impatiens]
gi|380022396|ref|XP_003695032.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Apis
florea]
gi|383865619|ref|XP_003708270.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Megachile
rotundata]
Length = 176
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PP I SL V N+T+RTT +DL +F++ G+V DI+IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ +A+ A+D +DGR++DGRE+ VQ A+YG
Sbjct: 62 FYDKRDAEDALDAMDGRLLDGRELRVQMARYG 93
>gi|196000460|ref|XP_002110098.1| hypothetical protein TRIADDRAFT_17694 [Trichoplax adhaerens]
gi|190588222|gb|EDV28264.1| hypothetical protein TRIADDRAFT_17694, partial [Trichoplax
adhaerens]
Length = 89
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 66/90 (73%), Gaps = 1/90 (1%)
Query: 10 PDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADE 69
P+I+ SL V NIT+RTT DDL +FDKYG++ D++IPRDRR G+SRG+AFVRY +
Sbjct: 1 PEISSMTSLKVDNITYRTTVDDLKRIFDKYGEIGDVYIPRDRR-GESRGYAFVRYHDRRD 59
Query: 70 AQKAVDRLDGRVVDGREITVQFAKYGPNAE 99
A+ A+D + G+ DGRE+ V A+YG A+
Sbjct: 60 AEDAMDCVHGKNFDGRELRVVMARYGRPAD 89
>gi|194761376|ref|XP_001962905.1| GF15672 [Drosophila ananassae]
gi|190616602|gb|EDV32126.1| GF15672 [Drosophila ananassae]
Length = 199
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 65/87 (74%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT +DL +F++ G+V DI+IPRDR T +SRGFAFVR+
Sbjct: 13 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKR 72
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A++ +DGR++DGRE+ VQ A+YG
Sbjct: 73 DAEDALEAMDGRMLDGRELRVQMARYG 99
>gi|195435065|ref|XP_002065522.1| GK14626 [Drosophila willistoni]
gi|194161607|gb|EDW76508.1| GK14626 [Drosophila willistoni]
Length = 203
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 65/87 (74%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT +DL +F++ G+V DI+IPRDR T +SRGFAFVR+
Sbjct: 18 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKR 77
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A++ +DGR++DGRE+ VQ A+YG
Sbjct: 78 DAEDALEAMDGRMLDGRELRVQMARYG 104
>gi|195401200|ref|XP_002059202.1| GJ16161 [Drosophila virilis]
gi|194156076|gb|EDW71260.1| GJ16161 [Drosophila virilis]
Length = 202
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 65/87 (74%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT +DL +F++ G+V DI+IPRDR T +SRGFAFVR+
Sbjct: 17 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKR 76
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A++ +DGR++DGRE+ VQ A+YG
Sbjct: 77 DAEDALEAMDGRMLDGRELRVQMARYG 103
>gi|289741385|gb|ADD19440.1| putative splicing factor [Glossina morsitans morsitans]
Length = 191
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 68/96 (70%), Gaps = 1/96 (1%)
Query: 1 MSH-FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGF 59
MSH G PP I SL V N+T+RTT +DL +F++ G+V DI+IPRDR T +SRGF
Sbjct: 1 MSHNSGGRPPPRIDGMISLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 60
Query: 60 AFVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
AFVR+ +A+ A++ +DGR +DGRE+ VQ A+YG
Sbjct: 61 AFVRFYDKRDAEDALEAMDGRKLDGRELRVQMARYG 96
>gi|256092428|ref|XP_002581939.1| serine/arginine rich splicing factor [Schistosoma mansoni]
gi|226481905|emb|CAX79218.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|353230937|emb|CCD77354.1| putative serine/arginine rich splicing factor [Schistosoma
mansoni]
Length = 102
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
M+ +GRS PP I SL V N+ +RTT DDL +F ++G+V DI+IPRD T +SRGFA
Sbjct: 1 MNRYGRS-PPRIDGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFA 59
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
FVRY EA A+ +DG VDGRE+ VQ AKYG
Sbjct: 60 FVRYCTDREADCAIRGMDGHKVDGREVRVQRAKYG 94
>gi|303324701|pdb|2KN4|A Chain A, The Structure Of The Rrm Domain Of Sc35
Length = 158
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 61/79 (77%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR+ +A+ A+D
Sbjct: 72 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 131
Query: 77 LDGRVVDGREITVQFAKYG 95
+DG V+DGRE+ VQ A+YG
Sbjct: 132 MDGAVLDGRELRVQMARYG 150
>gi|195114806|ref|XP_002001958.1| GI17122 [Drosophila mojavensis]
gi|193912533|gb|EDW11400.1| GI17122 [Drosophila mojavensis]
Length = 203
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 65/87 (74%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT +DL +F++ G+V DI+IPRDR T +SRGFAFVR+
Sbjct: 17 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKR 76
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A++ +DGR++DGRE+ VQ A+YG
Sbjct: 77 DAEDALEAMDGRMLDGRELRVQMARYG 103
>gi|431908736|gb|ELK12328.1| Splicing factor, arginine/serine-rich 2 [Pteropus alecto]
Length = 178
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 63/87 (72%), Gaps = 1/87 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQ 90
+ +A+ A+D +DG V+DGRE+ Q
Sbjct: 62 FHDKRDAEDAMDAMDGAVLDGRELRPQ 88
>gi|119609849|gb|EAW89443.1| splicing factor, arginine/serine-rich 2, isoform CRA_d [Homo
sapiens]
gi|193783682|dbj|BAG53593.1| unnamed protein product [Homo sapiens]
Length = 209
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 61/79 (77%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR+ +A+ A+D
Sbjct: 3 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 62
Query: 77 LDGRVVDGREITVQFAKYG 95
+DG V+DGRE+ VQ A+YG
Sbjct: 63 MDGAVLDGRELRVQMARYG 81
>gi|321458047|gb|EFX69122.1| hypothetical protein DAPPUDRAFT_62581 [Daphnia pulex]
Length = 109
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 64/88 (72%)
Query: 8 GPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYA 67
GPP I SL V N+T+RTT +DL +F+KYG V D++IP+DR + +SRGFAFVR+
Sbjct: 5 GPPRIEGMTSLKVDNLTYRTTCEDLRRVFEKYGDVGDVYIPKDRFSRESRGFAFVRFYDR 64
Query: 68 DEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ + A+ +DGR++DGRE+ VQ A+YG
Sbjct: 65 RDGEDAMHAMDGRMMDGRELRVQLARYG 92
>gi|226481921|emb|CAX79226.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
Length = 151
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
M+ +GRS PP I SL V N+ +RTT DDL +F ++G+V DI+IPRD T +SRGFA
Sbjct: 1 MNRYGRS-PPRIDGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPCTFESRGFA 59
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
FVRY EA A+ +DG VDGRE+ VQ AKYG
Sbjct: 60 FVRYCTDREADCAIRGMDGHKVDGREVRVQRAKYG 94
>gi|3892187|gb|AAC78303.1| RNA-binding protein [Schistosoma japonicum]
gi|226476664|emb|CAX72224.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226476666|emb|CAX72225.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226476668|emb|CAX72226.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226476670|emb|CAX72227.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226476672|emb|CAX72228.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226476674|emb|CAX72229.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481907|emb|CAX79219.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481909|emb|CAX79220.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481911|emb|CAX79221.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481913|emb|CAX79222.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481915|emb|CAX79223.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481917|emb|CAX79224.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481919|emb|CAX79225.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481923|emb|CAX79227.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481925|emb|CAX79228.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481927|emb|CAX79229.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481929|emb|CAX79230.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481933|emb|CAX79232.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481935|emb|CAX79233.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481937|emb|CAX79234.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481939|emb|CAX79235.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481941|emb|CAX79236.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481943|emb|CAX79237.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481945|emb|CAX79238.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481947|emb|CAX79239.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481949|emb|CAX79240.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481951|emb|CAX79241.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481953|emb|CAX79242.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481955|emb|CAX79243.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481957|emb|CAX79244.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481959|emb|CAX79245.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481961|emb|CAX79246.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
Length = 151
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
M+ +GRS PP I SL V N+ +RTT DDL +F ++G+V DI+IPRD T +SRGFA
Sbjct: 1 MNRYGRS-PPRIDGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFA 59
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
FVRY EA A+ +DG VDGRE+ VQ AKYG
Sbjct: 60 FVRYCTDREADCAIRGMDGHKVDGREVRVQRAKYG 94
>gi|256092430|ref|XP_002581940.1| serine/arginine rich splicing factor [Schistosoma mansoni]
gi|353230938|emb|CCD77355.1| putative serine/arginine rich splicing factor [Schistosoma
mansoni]
Length = 151
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
M+ +GRS PP I SL V N+ +RTT DDL +F ++G+V DI+IPRD T +SRGFA
Sbjct: 1 MNRYGRS-PPRIDGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFA 59
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
FVRY EA A+ +DG VDGRE+ VQ AKYG
Sbjct: 60 FVRYCTDREADCAIRGMDGHKVDGREVRVQRAKYG 94
>gi|226476676|emb|CAX72230.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
Length = 151
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
M+ +GRS PP I SL V N+ +RTT DDL +F ++G+V DI+IPRD T +SRGFA
Sbjct: 1 MNRYGRS-PPRIDGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFA 59
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
FVRY EA A+ +DG VDGRE+ VQ AKYG
Sbjct: 60 FVRYYTDREADCAIRGMDGHKVDGREVRVQRAKYG 94
>gi|389609107|dbj|BAM18165.1| serine/arginine rich splicing factor [Papilio xuthus]
Length = 151
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 62/79 (78%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL V N+T+RTTA+DL +F++ G V DI+IPRDR T +SRGFAFVR+ +A+ A+D
Sbjct: 3 SLKVDNLTYRTTAEDLRRVFERCGDVGDIYIPRDRYTRESRGFAFVRFFDRRDAEDALDS 62
Query: 77 LDGRVVDGREITVQFAKYG 95
LDGR++DGRE+ VQ A+YG
Sbjct: 63 LDGRMLDGRELRVQMARYG 81
>gi|115843186|ref|XP_001198082.1| PREDICTED: serine/arginine-rich splicing factor 2-like
[Strongylocentrotus purpuratus]
Length = 141
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 62/86 (72%)
Query: 10 PDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADE 69
PDI SL V N+T+ TT +DL F+KYG+V DI+IPRD+ + +SRGFAFVRY +
Sbjct: 8 PDIEGMTSLKVDNLTYSTTPEDLRRCFEKYGEVGDIYIPRDKFSRESRGFAFVRYPDKRD 67
Query: 70 AQKAVDRLDGRVVDGREITVQFAKYG 95
A+ A+D +DG + DGR++ VQ A+YG
Sbjct: 68 AEDAMDSMDGNLYDGRKLRVQMARYG 93
>gi|427783535|gb|JAA57219.1| Putative splicing factor sr protein superfamily [Rhipicephalus
pulchellus]
Length = 401
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 65/93 (69%), Gaps = 1/93 (1%)
Query: 3 HFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFV 62
++GR PP I SL V N+T+RTT +DL +F+KYG V D++IPR T +SRGFAFV
Sbjct: 2 NYGR-APPQIDGMTSLKVDNLTYRTTPEDLKRVFEKYGDVGDVYIPRHPYTRESRGFAFV 60
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
R+ + + A+D LDG ++DGRE+ VQ A+YG
Sbjct: 61 RFYDKRDCEDAMDSLDGYILDGRELRVQMARYG 93
>gi|391337692|ref|XP_003743199.1| PREDICTED: uncharacterized protein LOC100907227 [Metaseiulus
occidentalis]
Length = 256
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 65/91 (71%), Gaps = 1/91 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
FG +GPPDI SL V N+T+RTT +DL +F K+G V D++IPR+ R +SRGFAFVR
Sbjct: 63 FG-NGPPDIHGMVSLKVDNLTYRTTVEDLKRVFRKHGDVGDVYIPRNPRNNESRGFAFVR 121
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKY 94
+ +A++A+D LDG +DGRE+ + AKY
Sbjct: 122 FFDRRDAEEAMDALDGYRLDGRELRIAMAKY 152
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 44/61 (72%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
FG GPPDI SL V N+T+RTT +DL +F K+G V D++IPR+ R +SRGFAFVR
Sbjct: 3 FGGRGPPDIHGMVSLKVDNLTYRTTVEDLKRVFRKHGDVGDVYIPRNPRNNESRGFAFVR 62
Query: 64 Y 64
+
Sbjct: 63 F 63
>gi|115843189|ref|XP_001198099.1| PREDICTED: serine/arginine-rich splicing factor 2-like
[Strongylocentrotus purpuratus]
Length = 141
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 61/86 (70%)
Query: 10 PDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADE 69
PD SL V N+T+ TT +DL F+KYG+V DI+IPRD+ + +SRGFAFVRY +
Sbjct: 8 PDFEGMTSLKVDNLTYSTTPEDLRRCFEKYGEVGDIYIPRDKFSRESRGFAFVRYPDKRD 67
Query: 70 AQKAVDRLDGRVVDGREITVQFAKYG 95
A+ A+D +DG + DGR++ VQ A+YG
Sbjct: 68 AEDAMDSMDGNLYDGRKLRVQMARYG 93
>gi|426370158|ref|XP_004052038.1| PREDICTED: serine/arginine-rich splicing factor 8 [Gorilla
gorilla gorilla]
Length = 282
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 60/87 (68%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L P+F+KYG+V D++IPR+ T GFAFVR+
Sbjct: 7 PPDVDGMITLKVDNLTYRTSPDSLRPVFEKYGRVGDVYIPREPHTKAPWGFAFVRFHDRS 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+AQ A +DG V+DGRE+ VQ A+YG
Sbjct: 67 DAQDAEAAMDGAVLDGRELRVQMARYG 93
>gi|427786359|gb|JAA58631.1| Putative splicing factor sr protein superfamily [Rhipicephalus
pulchellus]
Length = 383
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 65/92 (70%), Gaps = 1/92 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR+ PP I SL V N+T+RTT +DL +F++YG V D++IPR T +SRGFAFVR
Sbjct: 3 YGRA-PPTIDGMTSLKVDNLTYRTTPEDLKRVFERYGDVGDVYIPRHPYTRESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ + + A+D LDG ++DGRE+ VQ A+YG
Sbjct: 62 FYDKRDCEDAMDALDGYMMDGRELRVQMARYG 93
>gi|195472373|ref|XP_002088475.1| GE12283 [Drosophila yakuba]
gi|194174576|gb|EDW88187.1| GE12283 [Drosophila yakuba]
Length = 217
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 61/78 (78%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+V N+T+RTT +DL +F++ G+V DI+IPRDR T +SRGFAFVR+ +A+ A++ +
Sbjct: 48 CVVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAM 107
Query: 78 DGRVVDGREITVQFAKYG 95
DGR++DGRE+ VQ A+YG
Sbjct: 108 DGRMLDGRELRVQMARYG 125
>gi|427797867|gb|JAA64385.1| Putative splicing factor sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 300
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 65/92 (70%), Gaps = 1/92 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR+ PP I SL V N+T+RTT +DL +F++YG V D++IPR T +SRGFAFVR
Sbjct: 3 YGRA-PPTIDGMTSLKVDNLTYRTTPEDLKRVFERYGDVGDVYIPRHPYTRESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ + + A+D LDG ++DGRE+ VQ A+YG
Sbjct: 62 FYDKRDCEDAMDALDGYMMDGRELRVQMARYG 93
>gi|270012859|gb|EFA09307.1| hypothetical protein TcasGA2_TC030627 [Tribolium castaneum]
Length = 161
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 65/89 (73%), Gaps = 4/89 (4%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PP I SL V N+T+RTT +DL +F++ G V DI+IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGDVGDIYIPRDRFTRESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFA 92
Y+ +A+ A+D +DGR++DGRE+ VQ A
Sbjct: 62 YR---DAEDALDAMDGRMLDGRELRVQMA 87
>gi|440895154|gb|ELR47416.1| Serine/arginine-rich splicing factor 2, partial [Bos grunniens
mutus]
Length = 86
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 62/84 (73%), Gaps = 1/84 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGREI 87
+ +A+ A+D +DG V+DGRE+
Sbjct: 62 FHDKRDAEDAMDAMDGAVLDGREL 85
>gi|326930671|ref|XP_003211466.1| PREDICTED: hypothetical protein LOC100548975 [Meleagris
gallopavo]
Length = 239
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDGR 85
+ +A+ A+D +DG V+DGR
Sbjct: 62 FHDKRDAEDAMDAMDGAVLDGR 83
>gi|298707093|emb|CBJ29885.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_a
[Ectocarpus siliculosus]
Length = 289
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 62/87 (71%)
Query: 7 SGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKY 66
+GPP+I +L V N+ + ++ DDL +F+KYG++ D+++PRD RTG+ RGFAFVR+
Sbjct: 18 NGPPNIEGMVTLKVDNVPYNSSIDDLRRIFEKYGELGDVYMPRDLRTGEPRGFAFVRFMD 77
Query: 67 ADEAQKAVDRLDGRVVDGREITVQFAK 93
+A A+DR+DG GRE+ +Q+AK
Sbjct: 78 QRDADDAIDRMDGEFFAGRELRIQYAK 104
>gi|308493715|ref|XP_003109047.1| CRE-RSP-4 protein [Caenorhabditis remanei]
gi|308247604|gb|EFO91556.1| CRE-RSP-4 protein [Caenorhabditis remanei]
Length = 199
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 61/89 (68%)
Query: 6 RSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYK 65
R PDI SL + N++++TT +DL +FD+YG + D+ IPRD+ + S+GF FVR+
Sbjct: 8 RRAAPDINGLTSLKIDNLSYQTTPNDLRRVFDRYGDIGDVHIPRDKYSRQSKGFGFVRFY 67
Query: 66 YADEAQKAVDRLDGRVVDGREITVQFAKY 94
+A+ A+DR DG++VDGRE+ V AKY
Sbjct: 68 ERRDAEHALDRTDGKLVDGRELRVTLAKY 96
>gi|355566974|gb|EHH23353.1| hypothetical protein EGK_06805 [Macaca mulatta]
Length = 287
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 59/87 (67%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +F+KYG+V D++IPR+ T RGFAFVR+
Sbjct: 7 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREHHTKAPRGFAFVRFHDRR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+AQ A +DG +DGRE+ VQ A+YG
Sbjct: 67 DAQDAEAAMDGAELDGRELRVQVARYG 93
>gi|9837439|gb|AAG00575.1|AF288041_1 splicing factor arginine/serine rich 2 [Oryzias latipes]
Length = 211
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 61/79 (77%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL V N+T+RT+ + L +F+KYG+V D++IPRDR + +SRGFAFVR+ +A+ A+D
Sbjct: 1 SLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYSKESRGFAFVRFFDKRDAEDAMDA 60
Query: 77 LDGRVVDGREITVQFAKYG 95
+DG ++DGRE+ VQ A+YG
Sbjct: 61 MDGALLDGRELRVQMARYG 79
>gi|332208823|ref|XP_003253510.1| PREDICTED: serine/arginine-rich splicing factor 8 [Nomascus
leucogenys]
Length = 303
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 60/87 (68%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +F+KYG+V D++IP + RT RGFAFVR+
Sbjct: 7 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPLEHRTKAPRGFAFVRFHDWS 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+AQ A +DG V+DGRE+ VQ A+YG
Sbjct: 67 DAQDAEAAMDGAVLDGRELRVQVARYG 93
>gi|198415726|ref|XP_002129926.1| PREDICTED: similar to splicing factor, arginine/serine-rich 2
(SC-35) [Ciona intestinalis]
Length = 178
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS GR PP + + SL V N+T+RT+ + L F+KYG V D++IPRDR + +SRGFA
Sbjct: 1 MSRGGRP-PPGLDNMVSLKVDNLTYRTSPETLKRSFEKYGDVGDVYIPRDRYSRESRGFA 59
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
FVR+ +A+ A+D +DG+ +DGR + V A+YG
Sbjct: 60 FVRFYDKRDAEDAMDCMDGKTMDGRVLRVAMARYG 94
>gi|388490247|ref|NP_001253264.1| serine/arginine-rich splicing factor 8 [Macaca mulatta]
gi|402894987|ref|XP_003910620.1| PREDICTED: serine/arginine-rich splicing factor 8 [Papio anubis]
gi|387542734|gb|AFJ71994.1| serine/arginine-rich splicing factor 8 [Macaca mulatta]
Length = 287
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 59/87 (67%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +F+KYG+V D++IPR+ T RGFAFVR+
Sbjct: 7 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+AQ A +DG +DGRE+ VQ A+YG
Sbjct: 67 DAQDAEAAMDGAELDGRELRVQVARYG 93
>gi|380809044|gb|AFE76397.1| serine/arginine-rich splicing factor 8 [Macaca mulatta]
gi|384944954|gb|AFI36082.1| serine/arginine-rich splicing factor 8 [Macaca mulatta]
Length = 287
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 59/87 (67%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +F+KYG+V D++IPR+ T RGFAFVR+
Sbjct: 7 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+AQ A +DG +DGRE+ VQ A+YG
Sbjct: 67 DAQDAEAAMDGAELDGRELRVQVARYG 93
>gi|17532819|ref|NP_495014.1| Protein RSP-4, isoform b [Caenorhabditis elegans]
gi|351060988|emb|CCD68735.1| Protein RSP-4, isoform b [Caenorhabditis elegans]
Length = 126
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 60/89 (67%)
Query: 6 RSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYK 65
R PDI SL + N++++TT +DL F++YG + D+ IPRD+ + S+GF FVR+
Sbjct: 9 RRAAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFY 68
Query: 66 YADEAQKAVDRLDGRVVDGREITVQFAKY 94
+A+ A+DR DG++VDGRE+ V AKY
Sbjct: 69 ERRDAEHALDRTDGKLVDGRELRVTLAKY 97
>gi|268531152|ref|XP_002630702.1| C. briggsae CBR-RSP-4 protein [Caenorhabditis briggsae]
Length = 195
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 61/89 (68%)
Query: 6 RSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYK 65
R PDI SL + N++++TT +DL +F++YG + D+ IPRD+ + S+GF FVR+
Sbjct: 8 RRAAPDINGLTSLKIDNLSYQTTPNDLRRVFERYGDIGDVHIPRDKYSRQSKGFGFVRFY 67
Query: 66 YADEAQKAVDRLDGRVVDGREITVQFAKY 94
+A+ A+DR DG++VDGRE+ V AKY
Sbjct: 68 ERRDAEHALDRTDGKLVDGRELRVTLAKY 96
>gi|296216761|ref|XP_002754708.1| PREDICTED: serine/arginine-rich splicing factor 8-like
[Callithrix jacchus]
Length = 295
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 59/87 (67%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +F+KYG+V D++IPR+ T RGFAFVR+
Sbjct: 7 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDQR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A +DG +DGRE+ VQ A+YG
Sbjct: 67 DAEDAEAAMDGAELDGRELRVQVARYG 93
>gi|17532817|ref|NP_495013.1| Protein RSP-4, isoform a [Caenorhabditis elegans]
gi|3929375|sp|Q09511.1|RSP4_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 4;
AltName: Full=CeSC35; AltName: Full=RNA-binding protein
srp-2
gi|351060987|emb|CCD68734.1| Protein RSP-4, isoform a [Caenorhabditis elegans]
Length = 196
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 60/89 (67%)
Query: 6 RSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYK 65
R PDI SL + N++++TT +DL F++YG + D+ IPRD+ + S+GF FVR+
Sbjct: 9 RRAAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFY 68
Query: 66 YADEAQKAVDRLDGRVVDGREITVQFAKY 94
+A+ A+DR DG++VDGRE+ V AKY
Sbjct: 69 ERRDAEHALDRTDGKLVDGRELRVTLAKY 97
>gi|426356205|ref|XP_004045477.1| PREDICTED: uncharacterized protein LOC101137976 [Gorilla gorilla
gorilla]
Length = 496
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 58/87 (66%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +F+KY V D++IPR+ T RGFAFVR+
Sbjct: 201 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYWPVGDVYIPREPHTKAPRGFAFVRFHDRS 260
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+AQ A +DG V+DGRE+ V+ A+YG
Sbjct: 261 DAQDAEAAMDGAVLDGRELRVRMARYG 287
>gi|189502900|gb|ACE06831.1| unknown [Schistosoma japonicum]
Length = 138
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/79 (56%), Positives = 56/79 (70%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL V N+ +RTT DDL +F ++G+V DI+IPRD T +SRGFAFVRY EA A+
Sbjct: 3 SLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVRYCTDREADCAIRG 62
Query: 77 LDGRVVDGREITVQFAKYG 95
+DG VDGRE+ VQ AKYG
Sbjct: 63 MDGHKVDGREVRVQRAKYG 81
>gi|15055543|ref|NP_115285.1| serine/arginine-rich splicing factor 8 [Homo sapiens]
gi|74761217|sp|Q9BRL6.1|SRSF8_HUMAN RecName: Full=Serine/arginine-rich splicing factor 8; AltName:
Full=Pre-mRNA-splicing factor SRP46; Short=Splicing
factor SRp46; AltName: Full=Splicing factor,
arginine/serine-rich 2B
gi|14141201|gb|AAK54350.1| SRp46 splicing factor [Homo sapiens]
gi|119587358|gb|EAW66954.1| Splicing factor, arginine/serine-rich, 46kD, isoform CRA_a [Homo
sapiens]
gi|119587359|gb|EAW66955.1| Splicing factor, arginine/serine-rich, 46kD, isoform CRA_a [Homo
sapiens]
gi|119587360|gb|EAW66956.1| Splicing factor, arginine/serine-rich, 46kD, isoform CRA_a [Homo
sapiens]
gi|189069077|dbj|BAG35415.1| unnamed protein product [Homo sapiens]
gi|193785751|dbj|BAG51186.1| unnamed protein product [Homo sapiens]
Length = 282
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 59/87 (67%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +F+KYG+V D++IPR+ T RGFAFVR+
Sbjct: 7 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+AQ A +DG +DGRE+ VQ A+YG
Sbjct: 67 DAQDAEAAMDGAELDGRELRVQVARYG 93
>gi|332837526|ref|XP_001139465.2| PREDICTED: serine/arginine-rich splicing factor 8 isoform 1 [Pan
troglodytes]
gi|410045734|ref|XP_003952050.1| PREDICTED: serine/arginine-rich splicing factor 8 isoform 2 [Pan
troglodytes]
gi|410226370|gb|JAA10404.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410255620|gb|JAA15777.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410295516|gb|JAA26358.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410348530|gb|JAA40869.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410348532|gb|JAA40870.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410348534|gb|JAA40871.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
Length = 282
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 59/87 (67%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +F+KYG+V D++IPR+ T RGFAFVR+
Sbjct: 7 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+AQ A +DG +DGRE+ VQ A+YG
Sbjct: 67 DAQDAEAAMDGAELDGRELRVQVARYG 93
>gi|34784708|gb|AAH57783.1| SFRS2B protein [Homo sapiens]
Length = 275
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 59/87 (67%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +F+KYG+V D++IPR+ T RGFAFVR+
Sbjct: 7 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+AQ A +DG +DGRE+ VQ A+YG
Sbjct: 67 DAQDAEAAMDGAELDGRELRVQVARYG 93
>gi|307219198|ref|NP_001182520.1| splicing factor, arginine/serine-rich 2B [Pongo abelii]
Length = 282
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 59/87 (67%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +F+KYG+V D++IPR+ T RGFAFVR+
Sbjct: 7 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+AQ A +DG +DGRE+ VQ A+YG
Sbjct: 67 DAQDAEAAMDGAELDGRELRVQVARYG 93
>gi|301765996|ref|XP_002918431.1| PREDICTED: hypothetical protein LOC100477809 [Ailuropoda
melanoleuca]
Length = 182
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%), Gaps = 1/81 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDG 84
+ +A+ A+D +DG V+DG
Sbjct: 62 FHDKRDAEDAMDAMDGAVLDG 82
>gi|281342789|gb|EFB18373.1| hypothetical protein PANDA_006871 [Ailuropoda melanoleuca]
Length = 173
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%), Gaps = 1/81 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRVVDG 84
+ +A+ A+D +DG V+DG
Sbjct: 62 FHDKRDAEDAMDAMDGAVLDG 82
>gi|114613263|ref|XP_519086.2| PREDICTED: uncharacterized protein LOC463398 isoform 2 [Pan
troglodytes]
Length = 293
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 59/86 (68%)
Query: 10 PDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADE 69
PD+ +L V N+T+RT+ D L +F+KYG+V D++IPR+ T RGFAFVR+ +
Sbjct: 8 PDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRSD 67
Query: 70 AQKAVDRLDGRVVDGREITVQFAKYG 95
AQ A +DG V+DGRE+ VQ A+YG
Sbjct: 68 AQDAEAAMDGAVLDGRELRVQMARYG 93
>gi|313242082|emb|CBY34259.1| unnamed protein product [Oikopleura dioica]
Length = 186
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
PP+I SL + N+++RT ++ L F KYG++ D++IP+D+ G+SRGFAFVR+
Sbjct: 6 PPNIGGMTSLKIDNLSYRTDSESLRRKFSKYGEIGDVYIPKDK-YGESRGFAFVRFHDKR 64
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKY 94
+A A+D+LDGR +DGREI V +A++
Sbjct: 65 DAGDAIDQLDGRDIDGREIRVDYARH 90
>gi|313227248|emb|CBY22395.1| unnamed protein product [Oikopleura dioica]
Length = 186
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
PP+I SL + N+++RT ++ L F KYG++ D++IP+D+ G+SRGFAFVR+
Sbjct: 6 PPNIGGMTSLKIDNLSYRTDSESLRRKFSKYGEIGDVYIPKDK-YGESRGFAFVRFHDKR 64
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKY 94
+A A+D+LDGR +DGREI V +A++
Sbjct: 65 DAGDAIDQLDGRDIDGREIRVDYARH 90
>gi|395743396|ref|XP_002822424.2| PREDICTED: uncharacterized protein LOC100448817 [Pongo abelii]
Length = 292
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 59/87 (67%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +F+KYG+V D++IPR+ T RGFAFVR+ +
Sbjct: 7 PPDVDGMITLKVDNLTYRTSHDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHHRS 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+AQ A +D ++DGRE+ VQ A YG
Sbjct: 67 DAQDAEAAMDRAMLDGRELRVQMALYG 93
>gi|444520122|gb|ELV12918.1| Serine/arginine-rich splicing factor 2 [Tupaia chinensis]
Length = 361
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 60/81 (74%), Gaps = 1/81 (1%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL V N+T+RT+ D L +F+KYG++ D++IPRDR T SRGFAFVR+ + A+ A+D
Sbjct: 5 SLKVDNLTYRTSPDTLRRVFEKYGRIGDVYIPRDRFTKASRGFAFVRFYCKNHAEDALDA 64
Query: 77 LDGRVVDGREITVQFAKY-GP 96
+DG V+DGR++ VQ A + GP
Sbjct: 65 VDGVVLDGRKLRVQMAYHDGP 85
>gi|341895771|gb|EGT51706.1| hypothetical protein CAEBREN_26166 [Caenorhabditis brenneri]
gi|341900371|gb|EGT56306.1| hypothetical protein CAEBREN_17888 [Caenorhabditis brenneri]
Length = 200
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 60/89 (67%)
Query: 6 RSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYK 65
R PDI SL + N++++TT +DL +F++YG + D+ IPRD+ + S+GF FVR+
Sbjct: 8 RRAAPDIGGLTSLKIDNLSYQTTPNDLRRVFERYGDIGDVHIPRDKYSRQSKGFGFVRFY 67
Query: 66 YADEAQKAVDRLDGRVVDGREITVQFAKY 94
+A+ A+DR DG+ VDGRE+ V AKY
Sbjct: 68 ERRDAEHAMDRTDGKNVDGRELRVTLAKY 96
>gi|427794699|gb|JAA62801.1| Putative splicing factor sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 368
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 57/78 (73%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N+T+RTT +DL +F++YG V D++IPR T +SRGFAFVR+ + + A+D L
Sbjct: 1 LKVDNLTYRTTPEDLKRVFERYGDVGDVYIPRHPYTRESRGFAFVRFYDKRDCEDAMDAL 60
Query: 78 DGRVVDGREITVQFAKYG 95
DG ++DGRE+ VQ A+YG
Sbjct: 61 DGYMMDGRELRVQMARYG 78
>gi|119609848|gb|EAW89442.1| splicing factor, arginine/serine-rich 2, isoform CRA_c [Homo
sapiens]
Length = 163
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDG 79
+ +A+ A+D +DG
Sbjct: 62 FHDKRDAEDAMDAMDG 77
>gi|159164254|pdb|2DNM|A Chain A, Solution Structure Of Rna Binding Domain In Srp46
Splicing Factor
Length = 103
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
Query: 5 GRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRY 64
G SGP D+ +L V N+T+RT+ D L +F+KYG+V D++IPR+ T RGFAFVR+
Sbjct: 4 GSSGP-DVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRF 62
Query: 65 KYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+AQ A +DG +DGRE+ VQ A+YG
Sbjct: 63 HDRRDAQDAEAAMDGAELDGRELRVQVARYG 93
>gi|51094548|gb|EAL23802.1| similar to Splicing factor, arginine/serine-rich, 46kD [Homo
sapiens]
Length = 549
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 58/87 (66%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +F+KYG+V D++IP + T RGFAFVR+
Sbjct: 263 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPLEPHTKAPRGFAFVRFHDRS 322
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+AQ A +DG V+D RE+ V+ A+YG
Sbjct: 323 DAQDAEAAMDGAVLDERELRVRMARYG 349
>gi|301096303|ref|XP_002897249.1| mannitol dehydrogenase, putative [Phytophthora infestans T30-4]
gi|262107334|gb|EEY65386.1| mannitol dehydrogenase, putative [Phytophthora infestans T30-4]
Length = 543
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 60/85 (70%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
PP++ ++L V N+ F+ +D+L LF K+G++ D++IPR R + +SRGFAFVR+
Sbjct: 350 PPNVDSMFTLKVDNVPFQIGSDELRDLFSKFGEIGDVYIPRARGSNESRGFAFVRFIEKR 409
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK 93
+A+ A+D ++G+ GR++ VQFAK
Sbjct: 410 DAEDAIDGMEGQEFQGRDLRVQFAK 434
>gi|395841993|ref|XP_003793806.1| PREDICTED: uncharacterized protein LOC100943026 [Otolemur
garnettii]
Length = 308
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 54/77 (70%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+T+ T++ L +F+KYG + D++IPRDR T +SRGFAF+R+ Y A+ A+
Sbjct: 14 SIKVNNLTYHTSSYTLRRMFEKYGPIDDVYIPRDRLTNESRGFAFIRFCYKHHAEDALGA 73
Query: 77 LDGRVVDGREITVQFAK 93
LDG ++DG E+ VQ A
Sbjct: 74 LDGILLDGHELQVQLAH 90
>gi|397468421|ref|XP_003805885.1| PREDICTED: uncharacterized protein LOC100969202 [Pan paniscus]
Length = 293
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 58/86 (67%)
Query: 10 PDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADE 69
PD+ +L V N+T+RT+ D L +F+KYG+V D++IPR+ T R FAFVR+ +
Sbjct: 8 PDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRSFAFVRFHDRSD 67
Query: 70 AQKAVDRLDGRVVDGREITVQFAKYG 95
AQ A +DG V+DGRE+ VQ A+YG
Sbjct: 68 AQDAEAAMDGAVLDGRELRVQMARYG 93
>gi|21752539|dbj|BAC04206.1| unnamed protein product [Homo sapiens]
gi|119609852|gb|EAW89446.1| splicing factor, arginine/serine-rich 2, isoform CRA_f [Homo
sapiens]
Length = 186
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRV 81
+ +A+ A+D +DG V
Sbjct: 62 FHDKRDAEDAMDAMDGAV 79
>gi|313228380|emb|CBY23531.1| unnamed protein product [Oikopleura dioica]
gi|313241505|emb|CBY33754.1| unnamed protein product [Oikopleura dioica]
Length = 201
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
Query: 6 RSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYK 65
R PPDI SL + N+++RT A+ L F K+G++ D++IP+D+ G+SRGFAFVR+
Sbjct: 3 RRPPPDIGGMTSLKIDNLSYRTDAESLRRTFSKFGEIGDVYIPKDK-HGESRGFAFVRFH 61
Query: 66 YADEAQKAVDRLDGRVVDGREITVQFAKY 94
+A A+D L G+ +DGREI V +A++
Sbjct: 62 DKRDAGDAIDDLAGKDLDGREIRVDYARH 90
>gi|44890463|gb|AAH66958.1| SFRS2 protein [Homo sapiens]
Length = 179
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDG 79
+ +A+ A+D +DG
Sbjct: 62 FHDKRDAEDAMDAMDG 77
>gi|449283101|gb|EMC89804.1| Splicing factor, arginine/serine-rich 2 [Columba livia]
Length = 182
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDGRV 81
+ +A+ A+D +DG V
Sbjct: 62 FHDKRDAEDAMDAMDGAV 79
>gi|299115545|emb|CBN75749.1| serine/arginine rich splicing factor, putative [Ectocarpus
siliculosus]
Length = 308
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 54/77 (70%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V NI F + ++L +F+ GK+ D++IPRD RTG+ RGFAFVRY +A AVDR
Sbjct: 3 TLKVDNIAFTCSPEELREVFEGCGKLGDVYIPRDMRTGEPRGFAFVRYLDKRDADYAVDR 62
Query: 77 LDGRVVDGREITVQFAK 93
LDG +GRE+ +Q+A+
Sbjct: 63 LDGTRFNGRELRIQYAR 79
>gi|332837543|ref|XP_001139222.2| PREDICTED: uncharacterized protein LOC738374 [Pan troglodytes]
Length = 279
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 58/87 (66%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +F+KYG+V D++IP + T RGFAFVR+
Sbjct: 7 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPLEPHTKAPRGFAFVRFHDRS 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+AQ A +DG V+D RE+ V+ A+YG
Sbjct: 67 DAQDAEAAMDGAVLDERELRVRMARYG 93
>gi|303275063|ref|XP_003056831.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461183|gb|EEH58476.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 96
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 59/88 (67%)
Query: 6 RSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYK 65
+S PDI+ YSL V NI +R + +F +G++ D+++PRDR TG+SRGFAFVR+
Sbjct: 1 KSTAPDISGMYSLKVDNIAYRVDVGRVREMFAAHGEIGDVYMPRDRTTGNSRGFAFVRFI 60
Query: 66 YADEAQKAVDRLDGRVVDGREITVQFAK 93
+EA+ A+ ++ + ++GR I V FA+
Sbjct: 61 DKNEAEDAIKAMNEKEIEGRAIRVAFAE 88
>gi|444727801|gb|ELW68279.1| Serine/arginine-rich splicing factor 2 [Tupaia chinensis]
Length = 218
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
Query: 64 YKYADEAQKAVDRLDG 79
+ +A+ A+D +DG
Sbjct: 62 FHDKRDAEDAMDAMDG 77
>gi|119609847|gb|EAW89441.1| splicing factor, arginine/serine-rich 2, isoform CRA_b [Homo
sapiens]
Length = 208
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 58/92 (63%), Gaps = 14/92 (15%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ D ++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDT-------------VYIPRDRYTKESRGFAFVR 48
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ +A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 49 FHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 80
>gi|14141216|gb|AAK54351.1| SRp46 splicing factor [Homo sapiens]
Length = 272
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 55/79 (69%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V N+T+RT+ D L +F+KYG+V D++IPR+ T RGFAFVR+ +AQ A
Sbjct: 5 TLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAA 64
Query: 77 LDGRVVDGREITVQFAKYG 95
+DG +DGRE+ VQ A+YG
Sbjct: 65 MDGAELDGRELRVQVARYG 83
>gi|397516519|ref|XP_003828475.1| PREDICTED: uncharacterized protein LOC100992382 [Pan paniscus]
Length = 384
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 54/82 (65%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +F+KYG+V D++IPR+ T RGFAFVR+
Sbjct: 153 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRR 212
Query: 69 EAQKAVDRLDGRVVDGREITVQ 90
+AQ A +DG +DGRE+ V
Sbjct: 213 DAQDAEAAMDGAELDGRELRVH 234
>gi|380791457|gb|AFE67604.1| serine/arginine-rich splicing factor 8, partial [Macaca mulatta]
Length = 86
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 54/79 (68%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +F+KYG+V D++IPR+ T RGFAFVR+
Sbjct: 7 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREHHTKAPRGFAFVRFHNRR 66
Query: 69 EAQKAVDRLDGRVVDGREI 87
+A+ A D +DG +DGRE+
Sbjct: 67 DAEDAEDAMDGAELDGREL 85
>gi|51094549|gb|EAL23803.1| similar to Splicing factor, arginine/serine-rich, 46kD [Homo
sapiens]
Length = 293
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 58/87 (66%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +F+KYG+V D++IP + T RGFAFVR+
Sbjct: 7 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPLEPHTKAPRGFAFVRFHDRS 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+AQ A +DG V+D RE+ V+ A+YG
Sbjct: 67 DAQDAEAAMDGAVLDERELRVRMARYG 93
>gi|167518892|ref|XP_001743786.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777748|gb|EDQ91364.1| predicted protein [Monosiga brevicollis MX1]
Length = 209
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 61/97 (62%), Gaps = 1/97 (1%)
Query: 5 GRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRY 64
GR P ++ +SL V NIT T D + LF +G++ DI++PRDR T SRGF FVR+
Sbjct: 3 GRPPPSNVDAMFSLKVDNITSDMTEDMMRDLFKDFGEIGDIYMPRDRNTNRSRGFCFVRF 62
Query: 65 KYADEAQKAVDRLDGRVVDGREITVQFAKYG-PNAER 100
+A KA +++DG +GR++ VQ AK+G P ER
Sbjct: 63 YEEADADKAAEKMDGHAFEGRDLIVQKAKFGRPQRER 99
>gi|348671618|gb|EGZ11439.1| hypothetical protein PHYSODRAFT_435859 [Phytophthora sojae]
Length = 92
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 60/84 (71%)
Query: 10 PDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADE 69
P++ + ++L V N+ F+ +D+L LF K+G++ D++IPR R + +SRGFAFVR+ +
Sbjct: 1 PNVDNMFTLKVDNVPFQIGSDELRDLFSKFGEIGDVYIPRARGSNESRGFAFVRFMEKRD 60
Query: 70 AQKAVDRLDGRVVDGREITVQFAK 93
A+ A++ ++G+ GR++ VQFAK
Sbjct: 61 AEDAIEGMEGQEFQGRDLRVQFAK 84
>gi|432113367|gb|ELK35779.1| Serine/arginine-rich splicing factor 2 [Myotis davidii]
Length = 218
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
Query: 64 YKYADEAQKAVD 75
+ +A+ A+D
Sbjct: 62 FHDKRDAEDAMD 73
>gi|325179763|emb|CCA14166.1| splicing factor putative [Albugo laibachii Nc14]
Length = 207
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 55/77 (71%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLL+ NI+ R +D+L F+++G V D++IPRD T + +GFAFV +K +A++A+
Sbjct: 8 SLLIRNISRRMRSDELRKTFEEFGDVRDVYIPRDFHTREVKGFAFVEFKNERDAEEALRN 67
Query: 77 LDGRVVDGREITVQFAK 93
LDG +DGREITV FA+
Sbjct: 68 LDGSRLDGREITVVFAQ 84
>gi|326437616|gb|EGD83186.1| hypothetical protein PTSG_03817 [Salpingoeca sp. ATCC 50818]
Length = 204
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 58/87 (66%)
Query: 8 GPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYA 67
G PD+++ +S+ V NI T +DL F ++G++ DI++PR R T D RG+AFVR+
Sbjct: 5 GRPDVSNLFSVKVDNIDRSTREEDLREAFKEFGEIGDIYMPRYRDTMDPRGYAFVRFINE 64
Query: 68 DEAQKAVDRLDGRVVDGREITVQFAKY 94
+A+ A+ +DG+ ++G+E+ Q AKY
Sbjct: 65 RDAEDAIKHMDGQQLNGKEVYCQLAKY 91
>gi|255084425|ref|XP_002508787.1| predicted protein [Micromonas sp. RCC299]
gi|226524064|gb|ACO70045.1| predicted protein [Micromonas sp. RCC299]
Length = 248
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 57/89 (64%)
Query: 5 GRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRY 64
G GPPDI+ YSL + N+ + T + L LF K+G++ D+++PRD T SRGFAFVR+
Sbjct: 20 GPKGPPDISGLYSLKLDNLDYSVTLEQLKELFGKHGEIGDVYMPRDYYTKRSRGFAFVRF 79
Query: 65 KYADEAQKAVDRLDGRVVDGREITVQFAK 93
K A+ A+ D + ++GR I +FA+
Sbjct: 80 KDRTAAEDAIKEFDQKELNGRPIACRFAE 108
>gi|328865472|gb|EGG13858.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 868
Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 56/89 (62%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
DI ++ L + N+++ TT DD+ F+ +GK+ +++IP DR + S+G AFV + ++A
Sbjct: 319 DIGESGRLFIRNLSYTTTEDDIKKFFEAHGKLSEVYIPIDRDSKKSKGIAFVLFMIPEQA 378
Query: 71 QKAVDRLDGRVVDGREITVQFAKYGPNAE 99
+A + LDG+ + GR I + AK P+ E
Sbjct: 379 MRAANDLDGKTLQGRIIHILAAKNAPSKE 407
Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 20 VLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDG 79
+ NI F ++ LF YG++ + +P + TG RGF FV Y EA+ A++ L
Sbjct: 766 IKNIAFECKPIEIRKLFTTYGELKSVRLP-SKPTGGHRGFGFVEYLTEQEAKNAMEALQN 824
Query: 80 RVVDGREITVQFAKYGPNAERIKE 103
+ GR + + FA+ N E+++E
Sbjct: 825 SHLYGRHLILSFAEEDKNIEQLRE 848
>gi|323455941|gb|EGB11808.1| hypothetical protein AURANDRAFT_9375, partial [Aureococcus
anophagefferens]
Length = 79
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 45/73 (61%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V NI+F T DL LF YGKV D F+P +R TG RGFAFV + EAQ A+ L
Sbjct: 4 LYVGNISFDMTQQDLNGLFGPYGKVTDAFLPTERETGRPRGFAFVTFSSPAEAQAAIADL 63
Query: 78 DGRVVDGREITVQ 90
DG+ +DGR + V
Sbjct: 64 DGKEIDGRALRVN 76
>gi|384916047|ref|ZP_10016247.1| RNA-binding protein (RRM domain) (fragment) [Methylacidiphilum
fumariolicum SolV]
gi|384526575|emb|CCG92118.1| RNA-binding protein (RRM domain) (fragment) [Methylacidiphilum
fumariolicum SolV]
Length = 99
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N+ FR + +DL LF++YG+V +I + D+ TG SRGFAFV + + AQ A+D L
Sbjct: 6 LYVGNLPFRISENDLRELFEQYGQVNEINLIVDKMTGQSRGFAFVTMETSQAAQSAIDSL 65
Query: 78 DGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDR 112
+G + GR+I V AK P ER N R R
Sbjct: 66 NGTSISGRQIVVNEAK--PREERPHRHRENSGRSR 98
>gi|255551589|ref|XP_002516840.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223543928|gb|EEF45454.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 257
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 53/76 (69%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LLV N+ +DL F+KYG V D+++P++ TG+ RGF FV+Y+YA++A +A R+
Sbjct: 54 LLVRNLPLDARPEDLRGPFEKYGPVKDVYLPKNYYTGEPRGFGFVKYRYAEDAAEAKQRM 113
Query: 78 DGRVVDGREITVQFAK 93
+ +++ GREI + +A+
Sbjct: 114 NHKIIGGREIRIVYAE 129
>gi|116831499|gb|ABK28702.1| unknown [Arabidopsis thaliana]
Length = 237
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 54/76 (71%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LL+ N+ +DL F+++G + DI++PR+ TG+ RGF FV+Y+YA++A +A+ R+
Sbjct: 49 LLIRNLPLDARPNDLRDSFERFGPLKDIYLPRNYYTGEPRGFGFVKYRYAEDAAEAMKRM 108
Query: 78 DGRVVDGREITVQFAK 93
+ +V+ GREI + FA+
Sbjct: 109 NHKVIGGREIAIVFAE 124
>gi|30687014|ref|NP_197382.3| SC35-like splicing factor 28 [Arabidopsis thaliana]
gi|91806878|gb|ABE66166.1| 28 kDa SC35-like splicing factor [Arabidopsis thaliana]
gi|332005232|gb|AED92615.1| SC35-like splicing factor 28 [Arabidopsis thaliana]
Length = 236
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 54/76 (71%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LL+ N+ +DL F+++G + DI++PR+ TG+ RGF FV+Y+YA++A +A+ R+
Sbjct: 49 LLIRNLPLDARPNDLRDSFERFGPLKDIYLPRNYYTGEPRGFGFVKYRYAEDAAEAMKRM 108
Query: 78 DGRVVDGREITVQFAK 93
+ +V+ GREI + FA+
Sbjct: 109 NHKVIGGREIAIVFAE 124
>gi|328858559|gb|EGG07671.1| hypothetical protein MELLADRAFT_71659 [Melampsora larici-populina
98AG31]
Length = 163
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 47/75 (62%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N+ + T + L F++YG+VVD + +DR TG SRGF F+ + D+AQ A+D L
Sbjct: 7 LFVGNLAWSTDTNSLTQAFNQYGEVVDAIVMQDRETGRSRGFGFITFSNQDQAQAAIDAL 66
Query: 78 DGRVVDGREITVQFA 92
+ VDGR I V FA
Sbjct: 67 NEADVDGRNIRVNFA 81
>gi|159471227|ref|XP_001693758.1| predicted protein [Chlamydomonas reinhardtii]
gi|158283261|gb|EDP09012.1| predicted protein [Chlamydomonas reinhardtii]
Length = 86
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 53/84 (63%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+LV NI T DDL F+K+G++ D++IPRD T SRGF F+ ++ A +A +A+ +
Sbjct: 1 SVLVRNIPLHMTVDDLRKKFEKFGELRDVYIPRDYYTQRSRGFGFIEFRDARDADEAIYQ 60
Query: 77 LDGRVVDGREITVQFAKYGPNAER 100
LD +DGREI V +K G R
Sbjct: 61 LDKTSIDGREINVCLSKEGRKTPR 84
>gi|193787706|dbj|BAG53419.1| unnamed protein product [Homo sapiens]
Length = 199
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
Query: 64 Y 64
+
Sbjct: 62 F 62
>gi|449017398|dbj|BAM80800.1| similar to SR family splicing factor SC35 [Cyanidioschyzon merolae
strain 10D]
Length = 194
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 53/84 (63%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
++ ++ L+V NI F T +DL LF YG V+DIFIP DR+ RGFAFVR + ++A
Sbjct: 64 ELQNSVGLMVRNIPFGTRQEDLLELFRPYGDVIDIFIPWDRQLRRIRGFAFVRLQTLEQA 123
Query: 71 QKAVDRLDGRVVDGREITVQFAKY 94
+ A+ LDG + R I V+ A+Y
Sbjct: 124 EAAIAALDGSTMRERIIAVKRAEY 147
>gi|449666027|ref|XP_002162990.2| PREDICTED: probable RNA-binding protein 19-like [Hydra
magnipapillata]
Length = 914
Score = 71.2 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 36/99 (36%), Positives = 59/99 (59%), Gaps = 4/99 (4%)
Query: 5 GRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRY 64
G DI+DT L V N+++ T D L LF ++G +V+I +P D+ + + GFAFV +
Sbjct: 397 GDEADEDISDTGRLFVRNLSYTCTEDSLTNLFSQFGPLVEINLPIDKNSNKTTGFAFVTF 456
Query: 65 KYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKE 103
AD A KA+ +LDG + +GR + + K ++++KE
Sbjct: 457 MMADHAIKAMSKLDGSIFEGRILHILPGK----SKKVKE 491
Score = 42.4 bits (98), Expect = 0.24, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
++V NI F T +L LF +G + + +P+ + TG RGFAF+ + +A++A L
Sbjct: 794 MVVRNIPFEATVKELQELFSTFGHIKSLRLPK-KITGTHRGFAFIDFTTKQDAKRAFKAL 852
Query: 78 -DGRVVDGREITVQFA 92
+ GR + +++A
Sbjct: 853 CQSTHLYGRRLVLEWA 868
>gi|26452521|dbj|BAC43345.1| putative Serine/arginine rich protein [Arabidopsis thaliana]
Length = 236
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 54/76 (71%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LL+ N+ +DL F+++G + DI++PR+ TG+ RGF FV+Y+YA++A +A+ R+
Sbjct: 49 LLIRNLPLDARPNDLRDSFERFGPLKDIYLPRNYYTGEPRGFGFVKYRYAEDAAEAMKRM 108
Query: 78 DGRVVDGREITVQFAK 93
+ +V+ GREI + FA+
Sbjct: 109 NHKVIGGREIAIVFAE 124
>gi|300122958|emb|CBK23965.2| unnamed protein product [Blastocystis hominis]
Length = 173
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
P D+ +S+ + N+ T +DL F+KYGK+ DI+IPR+ G +RGF FVRY D
Sbjct: 7 PTDVNSLFSVRIDNLPNDATKEDLNNHFEKYGKIADIYIPRNTHDGGNRGFGFVRYVNED 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFA 92
EA+KA+D +G ++G+ + V A
Sbjct: 67 EARKALDE-NGEELNGQTMRVSMA 89
>gi|388503430|gb|AFK39781.1| unknown [Medicago truncatula]
Length = 336
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 50/77 (64%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
LLV N+ +DL F++YG V D+++PR+ TG+ RGF FV+Y++ ++A A +
Sbjct: 49 GLLVRNLPLDARPEDLRGPFERYGPVKDVYLPRNYYTGEPRGFGFVKYRHGEDAAGAKQQ 108
Query: 77 LDGRVVDGREITVQFAK 93
L+ ++ GREI + FA+
Sbjct: 109 LNHTIIGGREIRIVFAE 125
>gi|411119198|ref|ZP_11391578.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410711061|gb|EKQ68568.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 104
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N++F+ T DDL F +YGKVV + +P+DR TG RGFAFV E A+D
Sbjct: 2 SVYVGNLSFKVTEDDLVETFSEYGKVVSVQLPKDRETGRMRGFAFVEMSSETEEAAAIDA 61
Query: 77 LDGRVVDGREITVQFAKYGPNAER 100
LDG GR++ V AK P ER
Sbjct: 62 LDGAEWMGRDLKVNKAK--PREER 83
>gi|9843655|emb|CAC03601.1| SC35-like splicing factor SCL28, 28 kD [Arabidopsis thaliana]
Length = 236
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 54/76 (71%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LL+ N+ +DL F+++G + DI++PR+ +G+ RGF FV+Y+YA++A +A+ R+
Sbjct: 49 LLIRNLPLDARPNDLRDSFERFGPLKDIYLPRNFNSGEPRGFGFVKYRYAEDAAEAMKRM 108
Query: 78 DGRVVDGREITVQFAK 93
+ +V+ GREI + FA+
Sbjct: 109 NHKVIGGREIAIVFAE 124
>gi|302844725|ref|XP_002953902.1| hypothetical protein VOLCADRAFT_121229 [Volvox carteri f.
nagariensis]
gi|300260714|gb|EFJ44931.1| hypothetical protein VOLCADRAFT_121229 [Volvox carteri f.
nagariensis]
Length = 294
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 52/79 (65%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLL N++ TTADDL +++G + DI++P+D TGD RG FV + +A++A
Sbjct: 30 SLLFRNLSKTTTADDLRHTTERFGPIRDIYLPKDFYTGDPRGLGFVEFSDPKDAEEARHS 89
Query: 77 LDGRVVDGREITVQFAKYG 95
LDG + GR I+VQFA++G
Sbjct: 90 LDGSTLAGRVISVQFAQHG 108
>gi|189218303|ref|YP_001938945.1| RNA-binding protein (RRM domain) [Methylacidiphilum infernorum V4]
gi|189185161|gb|ACD82346.1| RNA-binding protein (RRM domain) [Methylacidiphilum infernorum V4]
Length = 143
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N+ FR + +DL +F++YG+V +I + D+ TG SRGFAFV + + AQ A++ L
Sbjct: 49 LYVGNLPFRISENDLREIFEQYGQVNEINLIVDKMTGQSRGFAFVTMESSQAAQSAINNL 108
Query: 78 DGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDR 112
+G V GR+I V AK P ER N R R
Sbjct: 109 NGSSVSGRQIVVNEAK--PREERPHRHRENSGRSR 141
>gi|193785174|dbj|BAG54327.1| unnamed protein product [Homo sapiens]
Length = 122
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
>gi|398018793|ref|XP_003862561.1| RNA-binding protein, putative [Leishmania donovani]
gi|322500791|emb|CBZ35868.1| RNA-binding protein, putative [Leishmania donovani]
Length = 639
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V + T DD+ LF++YG ++ + RD TG+S G AFVRY DEA+ A+
Sbjct: 67 NLFVRKLASAVTEDDMRKLFEQYGTIMSFALMRDIHTGESLGTAFVRYSTHDEARAAMAA 126
Query: 77 LDGRVVDGREITVQFAK 93
LDGR + GR I++Q+AK
Sbjct: 127 LDGRELYGRPISIQWAK 143
>gi|168044871|ref|XP_001774903.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673797|gb|EDQ60315.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 257
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 59/98 (60%), Gaps = 3/98 (3%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
D T+ SLLV NI +A+DL F++YG V D+++PRD TG RGF FV++ +A
Sbjct: 37 DSTEPSSLLVRNIPRDCSAEDLRIPFERYGVVKDVYLPRDYYTGQPRGFGFVQFLEPRDA 96
Query: 71 QKAVDRLDGRVVDGREITVQFA---KYGPNAERIKEGL 105
+A LD +++ GREITV FA + P R KE +
Sbjct: 97 AEAQYCLDHQLIQGREITVVFAEENRKKPQEMRTKERI 134
>gi|449685942|ref|XP_002169071.2| PREDICTED: serine/arginine-rich splicing factor 10-like [Hydra
magnipapillata]
Length = 171
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+ ++DL +F+KYG + D++IP D T + RGFA+V++ Y D+A+ AVD
Sbjct: 11 SVFVRNVHHDVRSEDLRRIFEKYGDISDVYIPLDYYTREPRGFAYVQFDYEDDAEDAVDG 70
Query: 77 LDGRVVDGREITVQFAKYG---PNAERIKEG 104
LDG + GR+I + A+ G P+ R K+G
Sbjct: 71 LDGTTLFGRQIFCKNARGGRKTPHQMRYKDG 101
>gi|353235522|emb|CCA67534.1| related to glycine-rich RNA-binding protein [Piriformospora
indica DSM 11827]
Length = 236
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 46/79 (58%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ V N+++ TT D L F +YG VVD + RDR TG SRGF FV Y +EA A+ L
Sbjct: 5 IYVGNLSWNTTDDTLREAFRQYGNVVDSIVMRDRETGRSRGFGFVTYSSEEEASNAISGL 64
Query: 78 DGRVVDGREITVQFAKYGP 96
+ +DGR+I V A P
Sbjct: 65 NETSLDGRQIKVNLANARP 83
>gi|146093095|ref|XP_001466659.1| putative RNA-binding protein [Leishmania infantum JPCM5]
gi|134071022|emb|CAM69702.1| putative RNA-binding protein [Leishmania infantum JPCM5]
Length = 639
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V + T DD+ LF++YG ++ + RD TG+S G AFVRY DEA+ A+
Sbjct: 67 NLFVRKLASAVTEDDMRKLFEQYGTIMSFALMRDIHTGESLGTAFVRYSTHDEARAAMAA 126
Query: 77 LDGRVVDGREITVQFAK 93
LDGR + GR I++Q+AK
Sbjct: 127 LDGRELYGRPISIQWAK 143
>gi|389593931|ref|XP_003722214.1| putative RNA-binding protein [Leishmania major strain Friedlin]
gi|321438712|emb|CBZ12472.1| putative RNA-binding protein [Leishmania major strain Friedlin]
Length = 639
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 48/77 (62%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V + T DD+ LF++YG ++ + RD TG+S G AFVRY DEA A+
Sbjct: 67 NLFVRKLASAVTEDDMRKLFEQYGTIMSFALMRDIHTGESLGTAFVRYSTHDEASAAMAA 126
Query: 77 LDGRVVDGREITVQFAK 93
LDGR + GR I++Q+AK
Sbjct: 127 LDGRELYGRPISIQWAK 143
>gi|119609850|gb|EAW89444.1| splicing factor, arginine/serine-rich 2, isoform CRA_e [Homo
sapiens]
Length = 78
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
Query: 64 YKYADEAQ 71
+ +A+
Sbjct: 62 FHDKRDAE 69
>gi|401415854|ref|XP_003872422.1| putative RNA-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488646|emb|CBZ23893.1| putative RNA-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 638
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V + T DD+ LF++YG ++ + RD TG+S G AFVRY DEA+ A+
Sbjct: 66 NLFVRKLASAVTEDDMRKLFEQYGTIMSFALMRDIHTGESLGTAFVRYSTHDEARAAMAA 125
Query: 77 LDGRVVDGREITVQFAK 93
LDGR + GR I++Q+AK
Sbjct: 126 LDGRELYGRPISIQWAK 142
>gi|448878427|gb|AGE46176.1| arginine/serine-rich splicing factor SCL42 transcript I
[Physcomitrella patens subsp. patens]
Length = 370
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 58/96 (60%), Gaps = 3/96 (3%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
D T+ SLLV NI +A+DL F++YG V D+++PRD TG RGF FV++ +A
Sbjct: 37 DSTEPSSLLVRNIPRDCSAEDLRIPFERYGVVKDVYLPRDYYTGQPRGFGFVQFLEPRDA 96
Query: 71 QKAVDRLDGRVVDGREITVQFA---KYGPNAERIKE 103
+A LD +++ GREITV FA + P R KE
Sbjct: 97 AEAQYCLDHQLIQGREITVVFAEENRKKPQEMRTKE 132
>gi|297722159|ref|NP_001173443.1| Os03g0374575 [Oryza sativa Japonica Group]
gi|255674538|dbj|BAH92171.1| Os03g0374575 [Oryza sativa Japonica Group]
Length = 251
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 5 GRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRY 64
GR G D SLLV N+ DDL F K+G+V DI++PRD TG+ RGF F++Y
Sbjct: 33 GRYGGRDRDLPTSLLVRNLRRDCRPDDLRRPFGKFGRVKDIYLPRDYYTGEPRGFGFIQY 92
Query: 65 KYADEAQKAVDRLDGRVVDGREITVQFA---KYGPNAERIKE 103
++A A +DG+++ GRE+TV FA + P+ R +E
Sbjct: 93 YDPEDAADAKYHMDGQILLGREVTVVFAEENRKKPSEMRARE 134
>gi|224107319|ref|XP_002314444.1| predicted protein [Populus trichocarpa]
gi|222863484|gb|EEF00615.1| predicted protein [Populus trichocarpa]
Length = 252
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 51/75 (68%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LL+ N+ +DL F+K+G + DI++P++ TG+ RGF FV+Y+Y ++A +A R+
Sbjct: 50 LLIRNLPLDARPEDLRGPFEKFGPLKDIYLPKNYHTGEPRGFGFVKYRYGEDAAEAKKRM 109
Query: 78 DGRVVDGREITVQFA 92
D +++ GREI + FA
Sbjct: 110 DHKIIGGREIRIVFA 124
>gi|348688880|gb|EGZ28694.1| hypothetical protein PHYSODRAFT_537360 [Phytophthora sojae]
Length = 460
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 51/77 (66%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV NI+ R +D+ F++YG+V D++IP+D T + +GFAFV ++ EA A
Sbjct: 233 SLLVRNISRRLRPEDIRKEFERYGEVRDVYIPKDYYTKEPKGFAFVEFRSEREADDARRN 292
Query: 77 LDGRVVDGREITVQFAK 93
LDG +DGR+I V FA+
Sbjct: 293 LDGVRIDGRDIRVVFAQ 309
>gi|218186222|gb|EEC68649.1| hypothetical protein OsI_37086 [Oryza sativa Indica Group]
Length = 773
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL V N+T +D+ F K+G V D+++P+D TG+ RGFAFV + ++ +A KA
Sbjct: 332 SLFVSNLTRSCRPEDVQVPFQKFGPVRDVYLPKDYNTGEPRGFAFVEFAHSSDASKARYH 391
Query: 77 LDGRVVDGREITVQFA 92
++ +++ GREI+V FA
Sbjct: 392 MNRKMLSGREISVAFA 407
>gi|118484981|gb|ABK94355.1| unknown [Populus trichocarpa]
Length = 252
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 51/75 (68%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LL+ N+ +DL F+K+G + DI++P++ TG+ RGF FV+Y+Y ++A +A R+
Sbjct: 50 LLIRNLPLDARPEDLRGPFEKFGPLKDIYLPKNYHTGEPRGFGFVKYRYGEDAAEAKKRM 109
Query: 78 DGRVVDGREITVQFA 92
D +++ GREI + FA
Sbjct: 110 DHKIIGGREIRIVFA 124
>gi|403308741|ref|XP_003944810.1| PREDICTED: uncharacterized protein LOC101031882, partial [Saimiri
boliviensis boliviensis]
Length = 346
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 49/75 (65%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +F+KYG+V D++IPR+ T RGFAFVR+
Sbjct: 113 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDQR 172
Query: 69 EAQKAVDRLDGRVVD 83
+A+ A +DG +D
Sbjct: 173 DAEDAEAAMDGAELD 187
>gi|255582554|ref|XP_002532060.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223528264|gb|EEF30315.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 246
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 51/77 (66%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL F+++G + DI++PRD TG+ RGF FV+Y +A +A
Sbjct: 43 SLLVRNLRHDCRPEDLRRPFEQFGALKDIYLPRDYYTGEPRGFGFVQYADPQDAAEAKHH 102
Query: 77 LDGRVVDGREITVQFAK 93
+DGRV+ GRE+TV FA+
Sbjct: 103 MDGRVLLGRELTVVFAE 119
>gi|440295453|gb|ELP88366.1| multiple RNA-binding domain containing protein, putative [Entamoeba
invadens IP1]
Length = 685
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 59/99 (59%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+LV N+ + + D+ F+K+G++ ++ +P D+ +G ++GFAFV Y +A KA + +
Sbjct: 215 ILVNNLPYACSEQDVREAFEKFGEITEVHLPIDKVSGKTKGFAFVMYVVPQDAVKAFNEM 274
Query: 78 DGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDRSTGQ 116
DG+V+ GR I V +AK P A+ +E +D+ +
Sbjct: 275 DGQVIKGRIIHVNYAKADPYAQTTEEKEAKTYKDKKANE 313
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
+H R D+T + LLV N+ F T +++ LF YG + + +P+ + G +G+A
Sbjct: 589 FTHAKRKKAEDVTASTKLLVKNLPFETNLNEVRELFRVYGTLRGVRVPK-KIDGQLKGYA 647
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAK 93
F+ Y EA A + + GR + ++FAK
Sbjct: 648 FIEYATKQEAANAKAAMANSHLYGRHLVIEFAK 680
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 15 TYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAV 74
T++L + N+ +TT D L +F +YG++ + I ++ T F F+ + A A+
Sbjct: 506 THTLYIKNVNPKTTEDTLRKVFTQYGQIHSVSISKN-PTSSKNVFCFLEFARHSSALNAM 564
Query: 75 DRLDGRVVDGREITVQFA 92
G++VDG I ++ +
Sbjct: 565 KNAQGQLVDGNAIAIELS 582
>gi|145346140|ref|XP_001417551.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577778|gb|ABO95844.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 92
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+LV NI+F DD+ F YG V+D+++P+DR TG RG AFV+Y EA AV++
Sbjct: 2 SVLVRNISFDAHEDDIRDKFQAYGNVLDVYMPKDRETGRKRGLAFVKYAIQGEADDAVEK 61
Query: 77 LDGRVVDGREITVQFA 92
G + GRE+ + A
Sbjct: 62 ATGMDIMGREVRCEIA 77
>gi|357162700|ref|XP_003579494.1| PREDICTED: uncharacterized protein LOC100845138 [Brachypodium
distachyon]
Length = 929
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 54/90 (60%)
Query: 7 SGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKY 66
S P + D SL V N++ T ++L F +GK++D +PRD TG ++G+ FVRY
Sbjct: 299 SQPSEEIDMSSLYVRNLSLSMTKEELLQHFLPFGKIIDAKVPRDYATGLNKGYGFVRYSN 358
Query: 67 ADEAQKAVDRLDGRVVDGREITVQFAKYGP 96
+ EA A+ L+G +V+G+++ V+ + P
Sbjct: 359 SHEAANAIIHLNGHLVEGKKMEVRVSGVSP 388
Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 47/85 (55%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D +L V N+ + L LF +G++V + + TG S+G+ FV+Y A A
Sbjct: 202 DNTNLYVGNLPASVGSHKLIELFLPFGRIVRSKVADECFTGLSKGYGFVKYDDPHSATAA 261
Query: 74 VDRLDGRVVDGREITVQFAKYGPNA 98
++R++GR+VDG+ + V+ A P+
Sbjct: 262 INRMNGRLVDGKILEVRVAGVPPSG 286
Score = 42.4 bits (98), Expect = 0.20, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 42/84 (50%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D +L V ++ T + L +F G++ + DR TG S+GF FVR+ A A
Sbjct: 703 DMANLYVCHLPLYITTEKLIEIFLPCGQITQARVVTDRYTGISKGFGFVRFADTYSAAVA 762
Query: 74 VDRLDGRVVDGREITVQFAKYGPN 97
+ ++G ++G + V+ A P+
Sbjct: 763 LTHMNGYPLEGHILEVRIAGVHPS 786
>gi|301118214|ref|XP_002906835.1| splicing factor, arginine/serine-rich, putative [Phytophthora
infestans T30-4]
gi|262108184|gb|EEY66236.1| splicing factor, arginine/serine-rich, putative [Phytophthora
infestans T30-4]
Length = 233
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 52/77 (67%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV NI+ R +D+ F++YG+V D++IP+D T + +GFAFV ++ EA+ A
Sbjct: 8 SLLVRNISRRLRPEDIRKEFERYGEVRDVYIPKDFYTKEPKGFAFVEFRSEREAEDARRN 67
Query: 77 LDGRVVDGREITVQFAK 93
LDG +DGR+I V FA+
Sbjct: 68 LDGVRIDGRDIRVVFAQ 84
>gi|256089346|ref|XP_002580772.1| elav (embryonic lethal abnormal vision drosophila)-like protein
[Schistosoma mansoni]
gi|353230889|emb|CCD77306.1| elav (embryonic lethal, abnormal vision,drosophila)-like protein
[Schistosoma mansoni]
Length = 414
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 57/104 (54%), Gaps = 10/104 (9%)
Query: 1 MSHFGR--SGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRG 58
SHFGR S D ++ S+ + NI T A +F LF ++G ++++ IP+D +T SR
Sbjct: 242 FSHFGRPKSTKIDKNESTSVYIYNIGNMTEAQ-IFVLFSQFGPILNVSIPKDYKTNSSRN 300
Query: 59 FAFVRYKYADEAQKAVDRLDGRVVDGREITVQF-------AKYG 95
F FV Y AQ ++D ++G ++ GR + V F KYG
Sbjct: 301 FGFVTYSNFQSAQNSIDIMNGSLLSGRRLQVSFRQSKGKWTKYG 344
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L++ I T DL LF G + I RDR +G S GF F Y+ +D A KA+ R
Sbjct: 8 NLIINYIPTSITDADLTNLFSSVGAIKTCRIIRDRNSGSSFGFGFCEYEDSDSAHKAISR 67
Query: 77 LDGRVVDGREITVQFAK 93
+G + + + V AK
Sbjct: 68 FNGYRIADKILKVSLAK 84
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
+ + +L V N T DL F ++G VV I RD T S+G A+V ++ +A+
Sbjct: 89 LCQSSNLYVKNFPPTLTEHDLTAEFGQFGPVVQCRILRDHDTNVSKGSAYVLFENPADAE 148
Query: 72 KAVDRLDGRV----VDGREITVQFA 92
A LD R D + ++++FA
Sbjct: 149 AAKRSLDARAWPGSTDNQMLSIKFA 173
>gi|189465920|ref|ZP_03014705.1| hypothetical protein BACINT_02283 [Bacteroides intestinalis DSM
17393]
gi|189434184|gb|EDV03169.1| hypothetical protein BACINT_02283 [Bacteroides intestinalis DSM
17393]
Length = 128
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V N+++ T +D L LF +YG+V +I DR TG SRGF FV +E QKA+D
Sbjct: 2 NIYVANLSWNTNSDSLQELFSQYGEVTSAYIINDRETGRSRGFGFVEMPNDEEGQKAIDT 61
Query: 77 LDGRVVDGREITVQFAKYGPNAER 100
L+ +G+ I V A+ P ER
Sbjct: 62 LNETEFEGKNIAVSVAR--PRTER 83
>gi|168704512|ref|ZP_02736789.1| RNA-binding protein [Gemmata obscuriglobus UQM 2246]
Length = 129
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V NI+F+TT+DDL F +YG V+ I DR TG SRGFAFV D A++A+ L
Sbjct: 5 LYVGNISFQTTSDDLIQAFSQYGTVLGAQIVADRETGRSRGFAFVEMH--DGAEEAIAAL 62
Query: 78 DGRVVDGREITVQFAKYGPNAER 100
+G + GR +TV AK P ER
Sbjct: 63 NGAQLSGRTLTVNEAK--PREER 83
>gi|222637522|gb|EEE67654.1| hypothetical protein OsJ_25252 [Oryza sativa Japonica Group]
Length = 388
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 59/99 (59%), Gaps = 5/99 (5%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL F ++G++ DI+IPRD +G+ RGF FV+Y D+A A
Sbjct: 214 SLLVRNLRRDCRPEDLRRPFGQFGRLKDIYIPRDYYSGEPRGFGFVQYYDPDDAADAKYY 273
Query: 77 LDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDRSTG 115
+DG+V+ GRE+ V FA+ E K+ SRDR +G
Sbjct: 274 MDGQVILGREVAVVFAE-----ENRKKPSEMRSRDRISG 307
>gi|31249706|gb|AAP46199.1| putative splicing factor [Oryza sativa Japonica Group]
gi|108708412|gb|ABF96207.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|218192921|gb|EEC75348.1| hypothetical protein OsI_11773 [Oryza sativa Indica Group]
gi|222625002|gb|EEE59134.1| hypothetical protein OsJ_11026 [Oryza sativa Japonica Group]
Length = 217
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 55/89 (61%)
Query: 5 GRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRY 64
GR G D SLLV N+ DDL F K+G+V DI++PRD TG+ RGF F++Y
Sbjct: 26 GRYGGRDRDLPTSLLVRNLRRDCRPDDLRRPFGKFGRVKDIYLPRDYYTGEPRGFGFIQY 85
Query: 65 KYADEAQKAVDRLDGRVVDGREITVQFAK 93
++A A +DG+++ GRE+TV FA+
Sbjct: 86 YDPEDAADAKYHMDGQILLGREVTVVFAE 114
>gi|108708411|gb|ABF96206.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 218
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 55/89 (61%)
Query: 5 GRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRY 64
GR G D SLLV N+ DDL F K+G+V DI++PRD TG+ RGF F++Y
Sbjct: 26 GRYGGRDRDLPTSLLVRNLRRDCRPDDLRRPFGKFGRVKDIYLPRDYYTGEPRGFGFIQY 85
Query: 65 KYADEAQKAVDRLDGRVVDGREITVQFAK 93
++A A +DG+++ GRE+TV FA+
Sbjct: 86 YDPEDAADAKYHMDGQILLGREVTVVFAE 114
>gi|294921861|ref|XP_002778742.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239887462|gb|EER10537.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 840
Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/83 (42%), Positives = 48/83 (57%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
+ D +S+ V I R DDL F K+G++ D+FIP DR TG SRGF FVR+ +A+
Sbjct: 749 LNDLFSVKVDGIDERVRKDDLREAFSKFGEIGDVFIPVDRYTGVSRGFGFVRFYERRDAE 808
Query: 72 KAVDRLDGRVVDGREITVQFAKY 94
A+ +D + G ITV A Y
Sbjct: 809 DAIRDMDNKEFQGNRITVAAAMY 831
>gi|224121390|ref|XP_002318570.1| predicted protein [Populus trichocarpa]
gi|222859243|gb|EEE96790.1| predicted protein [Populus trichocarpa]
Length = 255
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 46/75 (61%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V I+F+T + L FDKYG VV+ I DR TG SRGF FV Y ++EA A+ L
Sbjct: 42 LFVGGISFQTDDNSLKEAFDKYGNVVEARIIMDRETGRSRGFGFVTYTSSEEASSAIQAL 101
Query: 78 DGRVVDGREITVQFA 92
DG+ + GR + V +A
Sbjct: 102 DGQDLHGRRVRVNYA 116
>gi|224091949|ref|XP_002309412.1| predicted protein [Populus trichocarpa]
gi|222855388|gb|EEE92935.1| predicted protein [Populus trichocarpa]
Length = 139
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 49/83 (59%)
Query: 15 TYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAV 74
T L V ++ TT + L F +YG+VV+ I DR S+GF FV Y DEAQKA+
Sbjct: 38 TTKLFVGGLSIYTTENGLSEAFSQYGQVVEAKIVMDRALDRSKGFGFVTYASEDEAQKAL 97
Query: 75 DRLDGRVVDGREITVQFAKYGPN 97
D ++G+ ++GR I V +AK N
Sbjct: 98 DEMNGKALNGRVIYVDYAKLKTN 120
>gi|168056094|ref|XP_001780057.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668555|gb|EDQ55160.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 225
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV NI TADDL F++YG V D+++PRD TG RGF FV++ +A +A
Sbjct: 57 SLLVRNIPRDCTADDLRIPFERYGVVKDVYLPRDYYTGLPRGFGFVQFLEPRDAAEAQYC 116
Query: 77 LDGRVVDGREITVQFA---KYGPNAERIKE 103
LD +++ GREITV FA + P RIKE
Sbjct: 117 LDHQLIAGREITVVFAEENRKKPQEMRIKE 146
>gi|448878423|gb|AGE46174.1| arginine/serine-rich splicing factor SCL33 transcript II
[Physcomitrella patens subsp. patens]
Length = 248
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV NI TADDL F++YG V D+++PRD TG RGF FV++ +A +A
Sbjct: 57 SLLVRNIPRDCTADDLRIPFERYGVVKDVYLPRDYYTGLPRGFGFVQFLEPRDAAEAQYC 116
Query: 77 LDGRVVDGREITVQFA---KYGPNAERIKE 103
LD +++ GREITV FA + P RIKE
Sbjct: 117 LDHQLIAGREITVVFAEENRKKPQEMRIKE 146
>gi|336371226|gb|EGN99565.1| hypothetical protein SERLA73DRAFT_159820 [Serpula lacrymans var.
lacrymans S7.3]
Length = 127
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 47/79 (59%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ V N+++ TT D L F +YG+VVD + RDR TG SRGF FV + EA+ A++ L
Sbjct: 5 VYVGNLSWSTTDDTLREAFSEYGQVVDSIVMRDRETGRSRGFGFVTFSSEQEAEAAINSL 64
Query: 78 DGRVVDGREITVQFAKYGP 96
+ +DGR I V A P
Sbjct: 65 HEQDLDGRRIKVNLANARP 83
>gi|357478561|ref|XP_003609566.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
gi|355510621|gb|AES91763.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
Length = 192
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 51/76 (67%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LLV N+ +DL F++YG V D+++PR+ TG+ RGF FV+Y++ ++A +A +L
Sbjct: 50 LLVRNLPLDARPEDLRGPFERYGPVKDVYLPRNYYTGEPRGFGFVKYRHGEDAAEAKQQL 109
Query: 78 DGRVVDGREITVQFAK 93
+ ++ GREI + FA+
Sbjct: 110 NHTIIGGREIRIVFAE 125
>gi|303668381|gb|ADM16300.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 121
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 51/81 (62%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
++D L V ++F TT + L F KYG + + + RD+ TG SRGF FV+Y A++A+
Sbjct: 1 MSDEGKLFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAK 60
Query: 72 KAVDRLDGRVVDGREITVQFA 92
A+D ++G+ VDGR I V A
Sbjct: 61 DALDGMNGKSVDGRTIRVDEA 81
>gi|423225541|ref|ZP_17212008.1| hypothetical protein HMPREF1062_04194 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392632469|gb|EIY26429.1| hypothetical protein HMPREF1062_04194 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 129
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V N+++ T +D L LF +YG+V +I DR TG SRGF FV +E QKA+D
Sbjct: 2 NIYVANLSWNTNSDSLQELFSQYGEVTSAYIINDRETGRSRGFGFVEMPNDEEGQKAIDA 61
Query: 77 LDGRVVDGREITVQFAKYGPNAER 100
L+ +G+ I + A+ P ER
Sbjct: 62 LNETEFEGKNIAISVAR--PRTER 83
>gi|224539725|ref|ZP_03680264.1| hypothetical protein BACCELL_04634 [Bacteroides cellulosilyticus
DSM 14838]
gi|224518648|gb|EEF87753.1| hypothetical protein BACCELL_04634 [Bacteroides cellulosilyticus
DSM 14838]
Length = 130
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V N+++ T +D L LF +YG+V +I DR TG SRGF FV +E QKA+D
Sbjct: 2 NIYVANLSWNTNSDSLQELFSQYGEVTSAYIINDRETGRSRGFGFVEMPNDEEGQKAIDA 61
Query: 77 LDGRVVDGREITVQFAKYGPNAER 100
L+ +G+ I + A+ P ER
Sbjct: 62 LNETEFEGKNIAISVAR--PRTER 83
>gi|388505224|gb|AFK40678.1| unknown [Lotus japonicus]
Length = 187
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++FRTT + L F +G++VD+ + D+ RGFAF+RY +E+QKA++ +
Sbjct: 96 LYVSGLSFRTTEESLRNCFKNFGQLVDVNLVMDKLANRPRGFAFLRYATEEESQKAIEGM 155
Query: 78 DGRVVDGREITVQFAK 93
G+ +DGR I V+ AK
Sbjct: 156 HGKFLDGRVIFVEVAK 171
>gi|392570008|gb|EIW63181.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 126
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ V N+++ TT D L F YG+++D + RDR TG SRGF FV + + EAQ A+ L
Sbjct: 5 VYVGNLSWNTTDDSLRSAFSNYGQILDSIVMRDRDTGRSRGFGFVTFSSSGEAQTAISSL 64
Query: 78 DGRVVDGREITVQFAK 93
+ + +DGR I V A
Sbjct: 65 NEQELDGRRIKVNLAN 80
>gi|281201992|gb|EFA76199.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 874
Score = 67.0 bits (162), Expect = 8e-09, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 51/83 (61%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
D+ +T L + N+ + T DDL LF+ +GK+ +I+IP DR + S+G AF+ + + A
Sbjct: 321 DVGETGRLFIRNLAYTVTEDDLKKLFEPFGKLSEIYIPIDRNSKKSKGIAFLLFMIPENA 380
Query: 71 QKAVDRLDGRVVDGREITVQFAK 93
+A+ +DG+ + GR + + AK
Sbjct: 381 MRAMTEMDGKAIQGRLVHILPAK 403
Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
P ++ T + V NI F + ++ LF YG++ + IP+ + TG RGF FV+Y
Sbjct: 771 PANVVST-KISVKNIPFEASPAEVRKLFATYGELQSVRIPK-KPTGGHRGFGFVQYLTEQ 828
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKE 103
EA+ A+D L + GR + ++FA+ N +++++
Sbjct: 829 EAKNAMDALRNSHLYGRHLVLEFAELDKNIDQLRQ 863
>gi|399108266|gb|AFP20557.1| RNA-binding protein [uncultured bacterium]
Length = 114
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N+ +RT + +L LF YG V + + DR TG S+GF FV A EAQ A++ L
Sbjct: 5 LYVGNLNYRTNSAELEQLFAAYGTVKSVQVISDRHTGQSKGFGFVEMGSAQEAQAAMNAL 64
Query: 78 DGRVVDGREITVQFAKYGPNAERIKEG 104
+G+ +GR +TV A+ P E G
Sbjct: 65 NGKDFNGRNLTVNEAR--PQTENQNRG 89
>gi|448878352|gb|AGE46139.1| arginine/serine-rich splicing factor SCL25B transcript IV [Sorghum
bicolor]
Length = 174
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 59/100 (59%), Gaps = 5/100 (5%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL F ++G++ DI++PRD TG+ RGF FV+Y D+A A
Sbjct: 38 SLLVRNLRRDCRPEDLRRPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYYDPDDAADAKYY 97
Query: 77 LDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDRSTGQ 116
+DG+VV GR+ITV FA+ E K+ +RDR G
Sbjct: 98 MDGQVVLGRQITVVFAE-----ENRKKPQEMRARDRVRGH 132
>gi|409044525|gb|EKM54006.1| hypothetical protein PHACADRAFT_257571 [Phanerochaete carnosa
HHB-10118-sp]
Length = 155
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 48/76 (63%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ V N+++ TT D L F ++G+++D + RDR TG SRGF FV + A+EAQ A+ L
Sbjct: 5 VYVGNLSWNTTDDSLRTAFSQFGQILDSIVMRDRDTGRSRGFGFVTFSSANEAQTAITSL 64
Query: 78 DGRVVDGREITVQFAK 93
+ + +DGR I V A
Sbjct: 65 NEQELDGRRIRVNLAN 80
>gi|298708752|emb|CBJ30714.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 270
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 50/77 (64%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+TFRT DD+ +F +G V D+++P D T RGFAFV + +A A DR
Sbjct: 34 SLLVRNLTFRTRVDDVKRIFTDFGDVRDVYLPLDFGTQKPRGFAFVEFYDPGDAAHARDR 93
Query: 77 LDGRVVDGREITVQFAK 93
LDG +DGR I+V +A+
Sbjct: 94 LDGYNLDGRNISVLYAQ 110
>gi|448878421|gb|AGE46173.1| arginine/serine-rich splicing factor SCL33 transcript I
[Physcomitrella patens subsp. patens]
Length = 286
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV NI TADDL F++YG V D+++PRD TG RGF FV++ +A +A
Sbjct: 57 SLLVRNIPRDCTADDLRIPFERYGVVKDVYLPRDYYTGLPRGFGFVQFLEPRDAAEAQYC 116
Query: 77 LDGRVVDGREITVQFA---KYGPNAERIKE 103
LD +++ GREITV FA + P RIKE
Sbjct: 117 LDHQLIAGREITVVFAEENRKKPQEMRIKE 146
>gi|302834399|ref|XP_002948762.1| hypothetical protein VOLCADRAFT_73973 [Volvox carteri f.
nagariensis]
gi|300265953|gb|EFJ50142.1| hypothetical protein VOLCADRAFT_73973 [Volvox carteri f.
nagariensis]
Length = 274
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 53/79 (67%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+LV NI TA+DL F+K+G++ D++IPRD T SRGF F+ ++ A +A +A+ +
Sbjct: 22 SVLVRNIPLNYTAEDLRAKFEKFGELRDVYIPRDYYTQRSRGFGFIEFRDARDADEAIYQ 81
Query: 77 LDGRVVDGREITVQFAKYG 95
D ++DGREI V +K G
Sbjct: 82 TDRTMLDGREINVCLSKEG 100
>gi|224102541|ref|XP_002312718.1| predicted protein [Populus trichocarpa]
gi|222852538|gb|EEE90085.1| predicted protein [Populus trichocarpa]
Length = 133
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 52/76 (68%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LL+ N+ +DL F+K+G + DI++P++ TG+ RGF FV+Y+++++A +A R+
Sbjct: 42 LLIRNLPLDARPEDLRRSFEKFGPLKDIYLPKNYYTGEPRGFGFVKYRHSEDAAEAKQRM 101
Query: 78 DGRVVDGREITVQFAK 93
D + + GREI + FA+
Sbjct: 102 DHKTIGGREIRIVFAE 117
>gi|375144786|ref|YP_005007227.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
gi|361058832|gb|AEV97823.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
Length = 102
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 48/77 (62%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V N+ F+ DDL LF +YG+V + DR TG SRGF FV +EA+KA+
Sbjct: 2 NLYVSNLGFQVNDDDLAKLFSQYGQVSSAKVIMDRETGRSRGFGFVEMSSDEEARKAIKE 61
Query: 77 LDGRVVDGREITVQFAK 93
L+G+ V+GR ++V A+
Sbjct: 62 LEGKPVEGRSLSVSEAR 78
>gi|440684571|ref|YP_007159366.1| putative transcriptional regulator [Anabaena cylindrica PCC 7122]
gi|428681690|gb|AFZ60456.1| putative transcriptional regulator [Anabaena cylindrica PCC 7122]
Length = 604
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 52/87 (59%)
Query: 7 SGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKY 66
SG D +D + + N+ F DL LF ++G++ D+++P+DR TG SRGFA V ++
Sbjct: 516 SGSNDTSDYAKIFIGNVDFNADEQDLETLFSQFGEISDVYLPKDRMTGKSRGFAIVEFEQ 575
Query: 67 ADEAQKAVDRLDGRVVDGREITVQFAK 93
+ A+KA++ + + R++ VQ K
Sbjct: 576 LESAKKALENTNPLFLRNRKLYVQKYK 602
>gi|384254118|gb|EIE27592.1| translation initiation factor 3, RNA-binding subunit [Coccomyxa
subellipsoidea C-169]
Length = 285
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N++ T DDL LF +G + I+I DR TG+SRGFAFV + + ++A +AV +
Sbjct: 203 SVRVTNLSEDTREDDLRELFSPFGPISRIYIAYDRETGESRGFAFVNFVHREDAARAVQK 262
Query: 77 LDGRVVDGREITVQFAKYGPNAERI 101
LDG D + V+FA P AER
Sbjct: 263 LDGHGYDNLILRVEFA--APRAERT 285
>gi|348501352|ref|XP_003438234.1| PREDICTED: cold-inducible RNA-binding protein A-like [Oreochromis
niloticus]
Length = 183
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 49/78 (62%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
++D L + ++F T D L F KYG + + + RD+ TG SRGF FV+Y A++A+
Sbjct: 1 MSDEGKLFIGGLSFETNEDSLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNAEDAK 60
Query: 72 KAVDRLDGRVVDGREITV 89
A+D ++G+ +DGR I V
Sbjct: 61 DALDAMNGKTLDGRAIRV 78
>gi|395325784|gb|EJF58201.1| hypothetical protein DICSQDRAFT_67439, partial [Dichomitus
squalens LYAD-421 SS1]
Length = 94
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 44/72 (61%)
Query: 22 NITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDGRV 81
N+++ TT D+L F YG+++D + RDR TG SRGF FV + EAQ A+ L+ +
Sbjct: 1 NLSWNTTDDNLRNAFSTYGQILDSIVMRDRDTGRSRGFGFVTFSSGSEAQSAIASLNEQE 60
Query: 82 VDGREITVQFAK 93
+DGR I V A
Sbjct: 61 LDGRRIKVNLAN 72
>gi|222616447|gb|EEE52579.1| hypothetical protein OsJ_34868 [Oryza sativa Japonica Group]
Length = 864
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 49/76 (64%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL V N+ +D+ F K+G V D+++P+D TG+ RGFAFV + ++ +A KA
Sbjct: 398 SLFVSNLPRSCRPEDVQVPFQKFGPVRDVYLPKDYNTGEPRGFAFVEFAHSSDASKARYH 457
Query: 77 LDGRVVDGREITVQFA 92
++ +++ GREI+V FA
Sbjct: 458 MNRKMLSGREISVAFA 473
>gi|223647416|gb|ACN10466.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 193
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 51/81 (62%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
++D L V ++F TT + L F KYG + + + RD+ TG SRGF FV+Y A++A+
Sbjct: 1 MSDEGKLFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAK 60
Query: 72 KAVDRLDGRVVDGREITVQFA 92
A++ ++G+ VDGR I V A
Sbjct: 61 DALEGMNGKSVDGRTIRVDEA 81
>gi|402217291|gb|EJT97372.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731
SS1]
Length = 167
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Query: 10 PDITDTYSLL----VLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYK 65
PD + S L + N+++ T D L F ++G+V+D + +DR +G SRGF FV +
Sbjct: 3 PDARSSRSALEYAHIGNLSWNTNDDTLRSAFSQFGQVLDCIVMKDRESGRSRGFGFVTFG 62
Query: 66 YADEAQKAVDRLDGRVVDGREITVQFAKYGP 96
+ EAQ A+D L+ + +DGR I V A P
Sbjct: 63 TSQEAQAAIDGLNEQDLDGRRIRVNLANARP 93
>gi|226493261|ref|NP_001151991.1| LOC100285628 [Zea mays]
gi|195651649|gb|ACG45292.1| splicing factor, arginine/serine-rich 4 [Zea mays]
gi|448878242|gb|AGE46084.1| arginine/serine-rich splicing factor SCL25B transcript I [Zea mays]
gi|448878246|gb|AGE46086.1| arginine/serine-rich splicing factor SCL25B transcript III [Zea
mays]
gi|448878250|gb|AGE46088.1| arginine/serine-rich splicing factor SCL25B transcript V [Zea mays]
gi|448878254|gb|AGE46090.1| arginine/serine-rich splicing factor SCL25B transcript VII [Zea
mays]
gi|448878256|gb|AGE46091.1| arginine/serine-rich splicing factor SCL25B transcript VIII [Zea
mays]
Length = 209
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL F ++G+V DI++PRD TGD RGF FV+Y +A A
Sbjct: 38 SLLVRNLRRDCRPEDLRRPFGQFGRVKDIYLPRDYYTGDPRGFGFVQYYDPADAADAKYY 97
Query: 77 LDGRVVDGREITVQFA---KYGPNAERIKEGLLNHSRD 111
+DG+VV GR+ITV FA + P R ++ + HS D
Sbjct: 98 MDGQVVLGRQITVVFAEENRKKPQEMRARDRVRGHSYD 135
>gi|302834547|ref|XP_002948836.1| hypothetical protein VOLCADRAFT_120666 [Volvox carteri f.
nagariensis]
gi|300266027|gb|EFJ50216.1| hypothetical protein VOLCADRAFT_120666 [Volvox carteri f.
nagariensis]
Length = 262
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 51/79 (64%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL+V N+ A+DL F+KYG++ D++IPRD T RGF FV +K +A+ A+
Sbjct: 18 SLVVRNLPLDIRAEDLRSKFEKYGELKDVYIPRDYYTQRPRGFGFVEFKDTRDAEDAMYS 77
Query: 77 LDGRVVDGREITVQFAKYG 95
LD ++GREI+V F++ G
Sbjct: 78 LDRSTINGREISVTFSREG 96
>gi|323452816|gb|EGB08689.1| hypothetical protein AURANDRAFT_9000, partial [Aureococcus
anophagefferens]
Length = 90
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 47/77 (61%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N++F T L F K+G VVD F+P+DR G SRGF FV ++ A +A+ AV
Sbjct: 2 LFVGNLSFETDGAALESYFSKWGPVVDCFLPQDRDKGGSRGFGFVTFRDAGDARAAVAEA 61
Query: 78 DGRVVDGREITVQFAKY 94
DG +DGR + V A++
Sbjct: 62 DGAELDGRTVRVNEAEH 78
>gi|440714448|ref|ZP_20895027.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SWK14]
gi|436440644|gb|ELP33948.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SWK14]
Length = 196
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V N++F+ T ++L F++YG+V + I DR TG SRGFAFV A+ A+ A++
Sbjct: 56 NIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIEN 115
Query: 77 LDGRVVDGREITVQFAK 93
L+G +DGR +TV A+
Sbjct: 116 LNGHEIDGRSVTVNEAR 132
>gi|421614043|ref|ZP_16055112.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SH28]
gi|408495250|gb|EKJ99839.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SH28]
Length = 189
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V N++F+ T ++L F++YG+V + I DR TG SRGFAFV A+ A+ A++
Sbjct: 56 NIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIEN 115
Query: 77 LDGRVVDGREITVQFAK 93
L+G +DGR +TV A+
Sbjct: 116 LNGHEIDGRSVTVNEAR 132
>gi|417304381|ref|ZP_12091404.1| protein containing RNA recognition motif, RNP-1 domains
[Rhodopirellula baltica WH47]
gi|449136828|ref|ZP_21772190.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula europaea 6C]
gi|327539333|gb|EGF25954.1| protein containing RNA recognition motif, RNP-1 domains
[Rhodopirellula baltica WH47]
gi|448884533|gb|EMB15023.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula europaea 6C]
Length = 195
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V N++F+ T ++L F++YG+V + I DR TG SRGFAFV A+ A+ A++
Sbjct: 56 NIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIEN 115
Query: 77 LDGRVVDGREITVQFAK 93
L+G +DGR +TV A+
Sbjct: 116 LNGHEIDGRSVTVNEAR 132
>gi|293675|gb|AAA39332.1| IFN-response element binding factor 2, partial [Mus musculus]
Length = 277
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
+GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFA
Sbjct: 49 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFA 104
>gi|242046420|ref|XP_002461081.1| hypothetical protein SORBIDRAFT_02g040350 [Sorghum bicolor]
gi|241924458|gb|EER97602.1| hypothetical protein SORBIDRAFT_02g040350 [Sorghum bicolor]
gi|448878346|gb|AGE46136.1| arginine/serine-rich splicing factor SCL25B transcript I [Sorghum
bicolor]
gi|448878348|gb|AGE46137.1| arginine/serine-rich splicing factor SCL25B transcript II [Sorghum
bicolor]
Length = 209
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 59/100 (59%), Gaps = 5/100 (5%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL F ++G++ DI++PRD TG+ RGF FV+Y D+A A
Sbjct: 38 SLLVRNLRRDCRPEDLRRPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYYDPDDAADAKYY 97
Query: 77 LDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDRSTGQ 116
+DG+VV GR+ITV FA+ E K+ +RDR G
Sbjct: 98 MDGQVVLGRQITVVFAE-----ENRKKPQEMRARDRVRGH 132
>gi|113478077|ref|YP_724138.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
gi|110169125|gb|ABG53665.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
Length = 102
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+++ T DDL +F +YG V + +P DR TG RGF FV +E QKA++
Sbjct: 2 SIYVGNLSYDVTQDDLSEVFAEYGTVKRVQLPTDRETGRPRGFGFVEMSSENEEQKAIEA 61
Query: 77 LDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDRSTG 115
LDG GR+I V AK P +R G +S + S G
Sbjct: 62 LDGAEWMGRDIKVNKAK--PREDRGSGGNRRNSPNYSRG 98
>gi|372863947|gb|AEX99749.1| putative serine/arginine-rich protein SCL subfamily member
[Saccharum hybrid cultivar]
Length = 209
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 59/100 (59%), Gaps = 5/100 (5%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL F ++G++ DI++PRD TG+ RGF FV+Y D+A A
Sbjct: 38 SLLVRNLRRDCRPEDLRRPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYYEPDDAADAKYY 97
Query: 77 LDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDRSTGQ 116
+DG+VV GR+ITV FA+ E K+ +RDR G
Sbjct: 98 MDGQVVLGRQITVVFAE-----ENRKKPQEMRARDRVRGH 132
>gi|294942803|ref|XP_002783687.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239896223|gb|EER15483.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 691
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 48/84 (57%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
+ D +S+ V I R DDL F K+G++ D+FIP DR TG SRGF FVR+ +A+
Sbjct: 507 LNDLFSVKVDGIDERVRKDDLREAFSKFGEIGDVFIPVDRYTGVSRGFGFVRFYERRDAE 566
Query: 72 KAVDRLDGRVVDGREITVQFAKYG 95
A+ +D + G ITV A Y
Sbjct: 567 DAIRDMDNKEFQGNRITVAAAMYN 590
>gi|255639915|gb|ACU20250.1| unknown [Glycine max]
Length = 270
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 50/76 (65%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LLV N+ +DL F++YG V D+++P++ TG+ RGF FV+Y+Y ++A +A L
Sbjct: 51 LLVRNLPLDARPEDLRIPFERYGPVKDVYLPKNYYTGEPRGFGFVKYRYGEDAAEAKQHL 110
Query: 78 DGRVVDGREITVQFAK 93
+ ++ GREI + FA+
Sbjct: 111 NHTIIGGREIRIVFAE 126
>gi|408398205|gb|EKJ77338.1| hypothetical protein FPSE_02416 [Fusarium pseudograminearum
CS3096]
Length = 128
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 47/79 (59%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N+++ TT D L F ++G+V D I RDR TG +RGF FV + ++A AVD L
Sbjct: 4 LYVGNLSWNTTDDTLRQTFSEFGEVTDSIIMRDRETGRARGFGFVTFSTEEQANAAVDAL 63
Query: 78 DGRVVDGREITVQFAKYGP 96
+ + +DGR I V A P
Sbjct: 64 NEQELDGRRIRVNVANARP 82
>gi|218200082|gb|EEC82509.1| hypothetical protein OsI_26989 [Oryza sativa Indica Group]
Length = 216
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 59/99 (59%), Gaps = 5/99 (5%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL F ++G++ DI+IPRD +G+ RGF FV+Y D+A A
Sbjct: 42 SLLVRNLRRDCRPEDLRRPFGQFGRLKDIYIPRDYYSGEPRGFGFVQYYDPDDAADAKYY 101
Query: 77 LDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDRSTG 115
+DG+V+ GRE+ V FA+ E K+ SRDR +G
Sbjct: 102 MDGQVILGREVAVVFAE-----ENRKKPSEMRSRDRISG 135
>gi|431838851|gb|ELK00780.1| Insulin-like growth factor 2 mRNA-binding protein 2 [Pteropus
alecto]
Length = 820
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + D+ I D+++ SRGFAFV
Sbjct: 96 HVGNRANPD--PNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFV 153
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D+A++A +R +G +DGR I V F+
Sbjct: 154 YFENVDDAKEAKERANGMELDGRRIRVDFS 183
>gi|255548387|ref|XP_002515250.1| RNA binding protein, putative [Ricinus communis]
gi|223545730|gb|EEF47234.1| RNA binding protein, putative [Ricinus communis]
Length = 564
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 59/105 (56%), Gaps = 6/105 (5%)
Query: 5 GRSGPPDIT---DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAF 61
GR G PD + L V + TT +++ PLF+ +G +V++ +PRDRR+G +G+ F
Sbjct: 118 GRPGSPDHNLDAASVKLFVAPVPIPTTIENICPLFEAHGSIVEVILPRDRRSGQQQGYCF 177
Query: 62 VRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLL 106
V+Y +EA +A+ L+G+ E+ +Y A+R +E L
Sbjct: 178 VKYATIEEADRAIRALNGQYTIPGEVHPLKVRY---ADRERERLC 219
>gi|116779573|gb|ABK21345.1| unknown [Picea sitchensis]
gi|224285462|gb|ACN40453.1| unknown [Picea sitchensis]
Length = 198
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 52/95 (54%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
PP T L V ++ TT L F YGKVVD+ I ++ T S+GF FV + +
Sbjct: 81 PPTRTRNNKLFVTGLSIYTTERTLQNAFSNYGKVVDVRIIMNKTTRRSKGFGFVEFSTEE 140
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKE 103
EA A+ ++G++++G I+V AK P + R +E
Sbjct: 141 EANTALKEMNGKILNGWLISVDIAKPTPRSGRARE 175
>gi|115473547|ref|NP_001060372.1| Os07g0633200 [Oryza sativa Japonica Group]
gi|33146902|dbj|BAC79901.1| putative SC35-like splicing factor SCL30a [Oryza sativa Japonica
Group]
gi|113611908|dbj|BAF22286.1| Os07g0633200 [Oryza sativa Japonica Group]
gi|215692446|dbj|BAG87866.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 213
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 59/99 (59%), Gaps = 5/99 (5%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL F ++G++ DI+IPRD +G+ RGF FV+Y D+A A
Sbjct: 39 SLLVRNLRRDCRPEDLRRPFGQFGRLKDIYIPRDYYSGEPRGFGFVQYYDPDDAADAKYY 98
Query: 77 LDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDRSTG 115
+DG+V+ GRE+ V FA+ E K+ SRDR +G
Sbjct: 99 MDGQVILGREVAVVFAE-----ENRKKPSEMRSRDRISG 132
>gi|328769593|gb|EGF79636.1| hypothetical protein BATDEDRAFT_19718 [Batrachochytrium
dendrobatidis JAM81]
Length = 431
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%)
Query: 5 GRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRY 64
GR P T +L + N++F T D++ F +YG++V + P DR TG +GF +V Y
Sbjct: 270 GRKEAPQSAPTTTLFLGNLSFNVTEDEIRESFSQYGQLVSVRFPTDRDTGAFKGFGYVEY 329
Query: 65 KYADEAQKAVDRLDGRVVDGREITVQFA 92
+ AQKAV+ L+G + GR + + +A
Sbjct: 330 GDVETAQKAVEGLNGVEIAGRSLRLDYA 357
Score = 37.0 bits (84), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V N+++ + L F G V I D+ TG ++GF +V ++ AD A A
Sbjct: 184 TVFVGNLSWNVDEEMLAATFADCGTVESARIITDKETGRAKGFGYVTFESAD-ALTAAMA 242
Query: 77 LDGRVVDGREITV 89
L G +DGREI V
Sbjct: 243 LTGTELDGREIRV 255
>gi|449018190|dbj|BAM81592.1| probable RNA binding protein Mrd1p [Cyanidioschyzon merolae strain
10D]
Length = 815
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/68 (42%), Positives = 43/68 (63%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ + N+ F T +DL L + +G++ D+ + RDR +G SRGF F R+K AQ+A+D L
Sbjct: 314 IFIRNLGFNVTFEDLEKLLEPFGELEDVHLVRDRESGQSRGFGFARFKTVTSAQQAMDAL 373
Query: 78 DGRVVDGR 85
DG V GR
Sbjct: 374 DGSVYQGR 381
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 10 PDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADE 69
P+ + L++ NI F + +L LF +G V + +P+ + G RGF FV Y E
Sbjct: 732 PEAGNETKLIIKNIAFEASKRELHQLFSSFGHVKSLRLPK-KVDGSGRGFCFVEYATPQE 790
Query: 70 AQKAVDRLDGRVVDGREITVQFA 92
+A + G GR++ V+++
Sbjct: 791 TARATALVQGTHFYGRKLVVEYS 813
>gi|224120444|ref|XP_002318331.1| predicted protein [Populus trichocarpa]
gi|222859004|gb|EEE96551.1| predicted protein [Populus trichocarpa]
Length = 181
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++FRTT + L F +G++VD+ + D+ RGFAF+RY+ +EAQKA++ +
Sbjct: 92 LYVSGLSFRTTEESLRNAFQNFGQLVDVNLVMDKVAKRPRGFAFLRYETEEEAQKAIEGM 151
Query: 78 DGRVVDGREITVQFAKYGPNAE 99
G+ +DGR I V+ AK P +E
Sbjct: 152 HGKFLDGRVIFVEVAK--PRSE 171
>gi|323448916|gb|EGB04809.1| hypothetical protein AURANDRAFT_17068, partial [Aureococcus
anophagefferens]
Length = 112
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 49/76 (64%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+LV N+TF+ + +DL F+K+G V D++IP D T + RGFAF+ EA +A+
Sbjct: 14 SVLVRNLTFKLSKEDLREEFEKFGSVKDVYIPLDYMTREPRGFAFIEMSCKAEADEAIAG 73
Query: 77 LDGRVVDGREITVQFA 92
LDG+ +DGR I V A
Sbjct: 74 LDGKDLDGRVIKVLLA 89
>gi|325183684|emb|CCA18143.1| eukaryotic translation initiation factor 3 subunit G putative
[Albugo laibachii Nc14]
Length = 317
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 53/81 (65%)
Query: 13 TDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
T+ +L V NI+ T DDL+ LF +G V+ +++ RDR T SRGFAFV + AD+A++
Sbjct: 206 TENATLRVTNISPDTCEDDLYELFRVFGHVLRVYLARDRETMQSRGFAFVSFARADDAER 265
Query: 73 AVDRLDGRVVDGREITVQFAK 93
A+++L G D + +++A+
Sbjct: 266 ALNKLQGYGYDHLILKLEWAR 286
>gi|333379583|ref|ZP_08471304.1| hypothetical protein HMPREF9456_02899 [Dysgonomonas mossii DSM
22836]
gi|332884976|gb|EGK05229.1| hypothetical protein HMPREF9456_02899 [Dysgonomonas mossii DSM
22836]
Length = 96
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V N+ F TT++ L LF YG+V I DR TG SRGF FV E QKA+D
Sbjct: 2 NIYVSNLNFSTTSESLQELFTAYGEVESTKIITDRETGRSRGFGFVEMPNDAEGQKAIDE 61
Query: 77 LDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDR 112
L+ +G+ ITV A+ P +R G N +R
Sbjct: 62 LNNADYEGKTITVTIAR--PKTDRASGGYNNRGGNR 95
>gi|302679630|ref|XP_003029497.1| hypothetical protein SCHCODRAFT_85789 [Schizophyllum commune
H4-8]
gi|300103187|gb|EFI94594.1| hypothetical protein SCHCODRAFT_85789 [Schizophyllum commune
H4-8]
Length = 174
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ V N+++ TT D L F +G+V+D + RDR TG SRGF FV + + EA+ A+ L
Sbjct: 5 VYVGNLSWNTTDDTLRQAFSNFGQVLDSIVMRDRETGRSRGFGFVTFSSSGEAESAISSL 64
Query: 78 DGRVVDGREITVQFAK 93
+ + +DGR I V A
Sbjct: 65 NEQELDGRRIKVNLAN 80
>gi|312375766|gb|EFR23071.1| hypothetical protein AND_13723 [Anopheles darlingi]
Length = 414
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 51/74 (68%)
Query: 27 TTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDGRVVDGRE 86
TT + L LF +YG+V DI + D +T SRG++F+ +K+A +A++A +L+G ++DGR+
Sbjct: 294 TTENTLMKLFSRYGQVKDIKLIYDGKTNVSRGYSFIYFKHASDARRAQRKLNGTMLDGRK 353
Query: 87 ITVQFAKYGPNAER 100
+ V F++ P+ R
Sbjct: 354 VRVDFSRSKPHEAR 367
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S++V NI TT L+ F ++GK+ I IP + G A+V + Y +E Q+A++
Sbjct: 113 SIIVRNIRDDTTDWQLYEAFRRFGKIYGILIP-------THGTAYVGFYYEEETQRALE- 164
Query: 77 LDGRVVDGREITV 89
+D + +G + V
Sbjct: 165 MDNNMFNGNRMRV 177
>gi|327282636|ref|XP_003226048.1| PREDICTED: probable RNA-binding protein 19-like isoform 2 [Anolis
carolinensis]
Length = 938
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/79 (40%), Positives = 47/79 (59%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
D++D+ L V N+ + +T +DL LF KYG + +I P D T +GFAFV Y + + A
Sbjct: 394 DLSDSGRLFVRNLPYTSTEEDLEKLFSKYGPLSEIHFPIDGLTKKPKGFAFVTYMFPEHA 453
Query: 71 QKAVDRLDGRVVDGREITV 89
KA +DG+V GR + V
Sbjct: 454 VKAFAEVDGQVFQGRMLHV 472
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGD---SRGFAFVRYKYADEAQKA 73
+L V N+ F TT + L +F K G V + R R S GF FV Y+ + AQKA
Sbjct: 711 TLFVKNLNFNTTEETLKEVFTKAGAVKSCTVSRKRDKAGTLLSMGFGFVEYRKPEHAQKA 770
Query: 74 VDRLDGRVVDGREITVQFAK 93
+ +L G VDG ++ V+ ++
Sbjct: 771 LKQLQGCSVDGHQLEVKISE 790
>gi|291286869|ref|YP_003503685.1| RNP-1 like RNA-binding protein [Denitrovibrio acetiphilus DSM
12809]
gi|290884029|gb|ADD67729.1| RNP-1 like RNA-binding protein [Denitrovibrio acetiphilus DSM
12809]
Length = 89
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/77 (41%), Positives = 49/77 (63%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V N+++ T DD+ LF K G+V + I DR TG S+GF FV +D+A+ A+D+
Sbjct: 2 NIYVGNLSYSTNEDDISALFSKIGEVDSVRIITDRDTGRSKGFGFVEMANSDQAKAAIDK 61
Query: 77 LDGRVVDGREITVQFAK 93
L+ +DGR +TV AK
Sbjct: 62 LNETELDGRNLTVNEAK 78
>gi|327282634|ref|XP_003226047.1| PREDICTED: probable RNA-binding protein 19-like isoform 1 [Anolis
carolinensis]
Length = 945
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/79 (40%), Positives = 47/79 (59%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
D++D+ L V N+ + +T +DL LF KYG + +I P D T +GFAFV Y + + A
Sbjct: 394 DLSDSGRLFVRNLPYTSTEEDLEKLFSKYGPLSEIHFPIDGLTKKPKGFAFVTYMFPEHA 453
Query: 71 QKAVDRLDGRVVDGREITV 89
KA +DG+V GR + V
Sbjct: 454 VKAFAEVDGQVFQGRMLHV 472
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGD---SRGFAFVRYKYADEAQKA 73
+L V N+ F TT + L +F K G V + R R S GF FV Y+ + AQKA
Sbjct: 718 TLFVKNLNFNTTEETLKEVFTKAGAVKSCTVSRKRDKAGTLLSMGFGFVEYRKPEHAQKA 777
Query: 74 VDRLDGRVVDGREITVQFAK 93
+ +L G VDG ++ V+ ++
Sbjct: 778 LKQLQGCSVDGHQLEVKISE 797
>gi|32476441|ref|NP_869435.1| RNA-binding protein [Rhodopirellula baltica SH 1]
gi|32446986|emb|CAD78892.1| RNA-binding protein [Rhodopirellula baltica SH 1]
Length = 206
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V N++F+ T ++L F++YG+V + I DR TG SRGFAFV A+ A+ A++
Sbjct: 67 NIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIEN 126
Query: 77 LDGRVVDGREITVQFAK 93
L+G +DGR +TV A+
Sbjct: 127 LNGHEIDGRSVTVNEAR 143
>gi|357457429|ref|XP_003598995.1| 28 kDa ribonucleoprotein [Medicago truncatula]
gi|355488043|gb|AES69246.1| 28 kDa ribonucleoprotein [Medicago truncatula]
Length = 447
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V I++ T L F KYG+V+D I DR +G S+GF FV Y +EA A+ L
Sbjct: 46 LFVGGISYNTDEQSLSDAFSKYGQVLDARIIMDRESGRSKGFGFVTYNTVEEASSAIQAL 105
Query: 78 DGRVVDGREITVQFAKYGPNAERIKEGL 105
DG+ + GR + V FA ER ++G
Sbjct: 106 DGQDLYGRRVGVNFAN-----ERPRDGF 128
>gi|195631119|gb|ACG36660.1| splicing factor, arginine/serine-rich 4 [Zea mays]
gi|195642888|gb|ACG40912.1| splicing factor, arginine/serine-rich 4 [Zea mays]
gi|195645762|gb|ACG42349.1| splicing factor, arginine/serine-rich 4 [Zea mays]
Length = 209
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 58/100 (58%), Gaps = 5/100 (5%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL F ++G+V DI++PRD TGD RGF FV+Y +A A
Sbjct: 38 SLLVRNLRRDCRPEDLRRPFGQFGRVKDIYLPRDYYTGDPRGFGFVQYYDPADAADAKYY 97
Query: 77 LDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDRSTGQ 116
+DG+VV GR+ITV FA+ E K+ +RDR G
Sbjct: 98 MDGQVVLGRQITVVFAE-----ENRKKPQEMRARDRVRGH 132
>gi|422295561|gb|EKU22860.1| glycine-rich rna-binding protein 4 [Nannochloropsis gaditana
CCMP526]
Length = 186
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 50/87 (57%)
Query: 7 SGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKY 66
+ P + Y L V N++FRT + L F+ +G++V + +R TG SRGF FV Y+
Sbjct: 21 TSPGQSEEGYKLFVGNLSFRTESAALREAFEPFGRIVFSTVIENRETGQSRGFGFVVYEQ 80
Query: 67 ADEAQKAVDRLDGRVVDGREITVQFAK 93
EA A+ R+D +DGR + V FA+
Sbjct: 81 KHEADAAISRMDNAELDGRTLRVNFAR 107
>gi|145346679|ref|XP_001417812.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578040|gb|ABO96105.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 98
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 52/86 (60%)
Query: 10 PDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADE 69
PDI++ S+ + N+++ +DL F+K+G V D++IP++R + +RGFAFVRY +
Sbjct: 1 PDISNLVSVKIDNVSYELREEDLREAFEKFGDVGDVYIPKERGSYRARGFAFVRYHSREH 60
Query: 70 AQKAVDRLDGRVVDGREITVQFAKYG 95
A+ AV + + GR I A+ G
Sbjct: 61 AEAAVSAMHETELGGRHIRAAIAERG 86
>gi|392593257|gb|EIW82582.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 136
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 45/79 (56%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N+++ T D L F +YG V D + RDR TG SRGF FV + A+EA A+ ++
Sbjct: 5 LYVGNLSWSTGDDGLRNAFGRYGAVTDSIVMRDRETGRSRGFGFVTFTTAEEANAAMGQM 64
Query: 78 DGRVVDGREITVQFAKYGP 96
D +DGR I V A P
Sbjct: 65 DQTELDGRTIRVNVANAKP 83
>gi|224130158|ref|XP_002328668.1| predicted protein [Populus trichocarpa]
gi|222838844|gb|EEE77195.1| predicted protein [Populus trichocarpa]
Length = 142
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 47/79 (59%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ + I+F+T + L FDKYG VV+ I DR TG SRGF FV Y ++EA A+ +
Sbjct: 42 IFIGGISFQTDDNGLKEAFDKYGNVVEGIIIMDRDTGRSRGFGFVTYTSSEEASSAIQAM 101
Query: 78 DGRVVDGREITVQFAKYGP 96
DG+ + GR + V +A P
Sbjct: 102 DGQDLHGRRVRVNYATERP 120
>gi|331241781|ref|XP_003333538.1| hypothetical protein PGTG_14960 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309312528|gb|EFP89119.1| hypothetical protein PGTG_14960 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 179
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N+ + T + L F ++G V+D + +DR TG SRGF F+ +K +A A++ L
Sbjct: 10 LFVGNLAWTTDSGSLKSAFGQFGDVIDAIVMQDRETGRSRGFGFITFKEEADAPGAIEAL 69
Query: 78 DGRVVDGREITVQFAK 93
+G+ +DGREI V +A
Sbjct: 70 NGQELDGREIRVNYAN 85
>gi|149924767|ref|ZP_01913111.1| probable nucleic acid-binding protein [Plesiocystis pacifica SIR-1]
gi|149814351|gb|EDM73949.1| probable nucleic acid-binding protein [Plesiocystis pacifica SIR-1]
Length = 155
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 5 GRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRY 64
G SGPP L V +++ T +D L LF K G VVD I DR TGDSRGF FV
Sbjct: 70 GNSGPP-----CRLFVGGLSWDTESDSLRELFAKVGAVVDAMIVTDRDTGDSRGFGFVTM 124
Query: 65 KYADEAQKAVDRLDGRVVDGREITVQFA 92
+A KA+ L G +DGR I + A
Sbjct: 125 ANRKDATKAMKELGGTELDGRSIRIDLA 152
>gi|330842446|ref|XP_003293189.1| hypothetical protein DICPUDRAFT_41662 [Dictyostelium purpureum]
gi|325076506|gb|EGC30286.1| hypothetical protein DICPUDRAFT_41662 [Dictyostelium purpureum]
Length = 880
Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 53/94 (56%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
D+ D+ + + N+++ T +DL +F KYGK+ +I IP + + S G AF+ Y + A
Sbjct: 338 DVGDSGRIFIRNLSYTTKEEDLEKVFSKYGKISEIHIPINYESKQSIGIAFILYLIPENA 397
Query: 71 QKAVDRLDGRVVDGREITVQFAKYGPNAERIKEG 104
A++ +DG+V GR I V AK P + +G
Sbjct: 398 VTALNEMDGKVFQGRIIHVLPAKQAPAKTPVLDG 431
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+++ N+ F +T ++ LF YG++ + IP+ + G RGF FV + +EA+ A++ L
Sbjct: 782 IIIKNLPFESTTKEIRKLFAAYGEIQSVRIPK-KPNGGHRGFGFVEFLTEEEAKNAMEAL 840
Query: 78 DGRVVDGREITVQFAKYGPNAERIKE 103
GR + +Q+A+ N + ++E
Sbjct: 841 GSSHFYGRHLVLQYAEQDKNVDELRE 866
>gi|393217699|gb|EJD03188.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 142
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 46/82 (56%)
Query: 15 TYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAV 74
T + V N+++ TT D L F YG+VVD + RDR TG SRGF FV + EA A+
Sbjct: 2 TAKVYVGNLSWNTTDDTLRKAFSDYGQVVDSIVMRDRDTGRSRGFGFVTFSSETEATGAI 61
Query: 75 DRLDGRVVDGREITVQFAKYGP 96
L+ + +GR I V FA P
Sbjct: 62 SALNEQEFEGRRIKVNFANARP 83
>gi|156084440|ref|XP_001609703.1| RNA-binding protein P22H7.02c [Babesia bovis T2Bo]
gi|154796955|gb|EDO06135.1| RNA-binding protein P22H7.02c, putative [Babesia bovis]
Length = 702
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 15 TYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAV 74
T ++V N+ F+ T DL+ LF YG V + IP+ ++ ++RGFAFV Y E+ +AV
Sbjct: 617 TSKIIVKNLAFQATKQDLYKLFSFYGNVKSVRIPKSLKS-NNRGFAFVEYSSKQESARAV 675
Query: 75 DRLDGRVVDGREITVQFAKYGPNAER 100
+ L + GR + ++FA+ N+E+
Sbjct: 676 ESLQHSHLYGRHLVLEFAEEDENSEQ 701
>gi|343459003|gb|AEM37660.1| cold inducible RNA binding protein [Epinephelus bruneus]
Length = 176
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 53/89 (59%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
++D L + ++F T + L F KYG + + + RD+ TG SRGF FV+Y +D+A+
Sbjct: 1 MSDEGKLFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNSDDAK 60
Query: 72 KAVDRLDGRVVDGREITVQFAKYGPNAER 100
A++ ++G+ +DGR I V A G + R
Sbjct: 61 DALEGMNGKTLDGRAIRVDEAGKGGRSNR 89
>gi|331241775|ref|XP_003333535.1| hypothetical protein PGTG_14957 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309312525|gb|EFP89116.1| small subunit ribosomal protein S19 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 206
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N+ + T + L F ++G VVD + +DR TG SRGF F+ +K A A++ L
Sbjct: 34 LFVGNLAWTTDSGSLKSAFGQFGDVVDAIVMQDRETGRSRGFGFITFKEEAAAPGAIEAL 93
Query: 78 DGRVVDGREITVQFAK 93
+G+ +DGREI V +A
Sbjct: 94 NGQELDGREIRVNYAN 109
>gi|363754371|ref|XP_003647401.1| hypothetical protein Ecym_6201 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891038|gb|AET40584.1| hypothetical protein Ecym_6201 [Eremothecium cymbalariae
DBVPG#7215]
Length = 448
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
P +DT L + N++F D++F LF YG ++ + IP T +GF +V+Y +
Sbjct: 307 PSQPSDT--LFLGNLSFNADRDNIFELFKDYGSIISVRIPTHPETNQPKGFGYVQYASIE 364
Query: 69 EAQKAVDRLDGRVVDGREITVQFA 92
EAQKA+D+L G +D R + + F+
Sbjct: 365 EAQKALDKLQGEYIDNRPVRLDFS 388
Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 43/84 (51%)
Query: 13 TDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
T+ ++ V +++ + L F+ G V+ + +R T SRG+ +V ++ A+K
Sbjct: 208 TEPATIFVGRLSWSIDDEWLKTEFEHIGGVISARVIYERGTERSRGYGYVDFEDKSYAEK 267
Query: 73 AVDRLDGRVVDGREITVQFAKYGP 96
A+ + G+ +DGR I V + P
Sbjct: 268 AIKEMQGKEIDGRPINVDMSTSKP 291
>gi|299751777|ref|XP_001830476.2| glycine-rich RNA binding protein [Coprinopsis cinerea
okayama7#130]
gi|298409530|gb|EAU91356.2| glycine-rich RNA binding protein [Coprinopsis cinerea
okayama7#130]
Length = 142
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 44/76 (57%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ V N+++ TT D L F +YG V+D + RDR TG SRGF FV Y +EA A+ L
Sbjct: 5 VYVGNLSWNTTDDSLRQAFSQYGNVLDSIVMRDRDTGRSRGFGFVTYSATEEADAAIASL 64
Query: 78 DGRVVDGREITVQFAK 93
+ +DGR I V A
Sbjct: 65 HDQELDGRRIKVNIAN 80
>gi|159463786|ref|XP_001690123.1| predicted protein [Chlamydomonas reinhardtii]
gi|158284111|gb|EDP09861.1| predicted protein [Chlamydomonas reinhardtii]
Length = 118
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLL N++ TT +DL ++YG + DI++P+D +TG+ RG FV + +A++A
Sbjct: 31 SLLFRNLSKTTTTEDLRHYAERYGPIRDIYLPKDFQTGEPRGLGFVEFSDPKDAEEARHC 90
Query: 77 LDGRVVDGREITVQFAKYG 95
+DG V GR I+V FA++G
Sbjct: 91 MDGSTVAGRVISVTFAQHG 109
>gi|194688600|gb|ACF78384.1| unknown [Zea mays]
gi|194700100|gb|ACF84134.1| unknown [Zea mays]
gi|219887871|gb|ACL54310.1| unknown [Zea mays]
gi|224035011|gb|ACN36581.1| unknown [Zea mays]
gi|238908719|gb|ACF81490.2| unknown [Zea mays]
gi|448878248|gb|AGE46087.1| arginine/serine-rich splicing factor SCL25B transcript IV [Zea
mays]
Length = 209
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 56/95 (58%), Gaps = 3/95 (3%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL F ++G+V DI++PRD TGD RGF FV+Y +A A
Sbjct: 38 SLLVRNLRRDCRPEDLRRPFGQFGRVKDIYLPRDYYTGDPRGFGFVQYYDPADAADAKYY 97
Query: 77 LDGRVVDGREITVQFA---KYGPNAERIKEGLLNH 108
+DG+VV GR+ITV FA + P R ++ + H
Sbjct: 98 MDGQVVLGRQITVVFAEENRKKPQEMRARDRVRGH 132
>gi|358248974|ref|NP_001239716.1| uncharacterized protein LOC100816913 [Glycine max]
gi|255645650|gb|ACU23319.1| unknown [Glycine max]
Length = 205
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 58/100 (58%), Gaps = 7/100 (7%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL F ++G + D+++PRD TG+ RGF FV+Y +A A
Sbjct: 41 SLLVRNLNRDCRPEDLHGPFGQFGPLKDVYLPRDYYTGEPRGFGFVQYVDPADAADAKYH 100
Query: 77 LDGRVVDGREITVQFA---KYGPNAERIKEGLLNHSRDRS 113
+DGR++ GREITV FA + P R +E H RDRS
Sbjct: 101 MDGRILLGREITVVFAEENRKKPAEMRARE----HRRDRS 136
>gi|351725889|ref|NP_001237108.1| uncharacterized protein LOC100305561 [Glycine max]
gi|255625921|gb|ACU13305.1| unknown [Glycine max]
Length = 180
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++FRTT + L F +G++V++ + DR RGFAF+RY +E+QKA++ +
Sbjct: 90 LYVSGLSFRTTEESLRNAFKNFGQLVEVKLVMDRIANRPRGFAFLRYATEEESQKAIEGM 149
Query: 78 DGRVVDGREITVQFAK 93
G+ +DGR I V+ AK
Sbjct: 150 HGKFLDGRVIFVEVAK 165
>gi|302782525|ref|XP_002973036.1| hypothetical protein SELMODRAFT_8400 [Selaginella moellendorffii]
gi|302805506|ref|XP_002984504.1| hypothetical protein SELMODRAFT_8401 [Selaginella moellendorffii]
gi|300147892|gb|EFJ14554.1| hypothetical protein SELMODRAFT_8401 [Selaginella moellendorffii]
gi|300159637|gb|EFJ26257.1| hypothetical protein SELMODRAFT_8400 [Selaginella moellendorffii]
Length = 93
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 59/90 (65%), Gaps = 3/90 (3%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV NI+ T ADDL F++YG V D+++P+D +G+ RGF FV++ +A +A +
Sbjct: 4 SLLVRNISRDTRADDLRGPFERYGAVKDVYLPKDFYSGEPRGFGFVQFIDPRDAIEAQYK 63
Query: 77 LDGRVVDGREITVQFA---KYGPNAERIKE 103
++ +++ GRE++V FA + P R+KE
Sbjct: 64 MNHQLIRGREVSVVFAEETRKKPAEMRMKE 93
>gi|115486805|ref|NP_001068546.1| Os11g0704700 [Oryza sativa Japonica Group]
gi|62733154|gb|AAX95271.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative
[Oryza sativa Japonica Group]
gi|77552711|gb|ABA95508.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113645768|dbj|BAF28909.1| Os11g0704700 [Oryza sativa Japonica Group]
Length = 502
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL V N+ +D+ F K+G V D+++P+D TG+ RGFAFV + ++ +A KA
Sbjct: 36 SLFVSNLPRSCRPEDVQVPFQKFGPVRDVYLPKDYNTGEPRGFAFVEFAHSSDASKARYH 95
Query: 77 LDGRVVDGREITVQFA 92
++ +++ GREI+V FA
Sbjct: 96 MNRKMLSGREISVAFA 111
>gi|256092434|ref|XP_002581942.1| serine/arginine rich splicing factor [Schistosoma mansoni]
gi|353230936|emb|CCD77353.1| putative serine/arginine rich splicing factor [Schistosoma mansoni]
Length = 80
Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/58 (58%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 44 DIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG-PNAER 100
DI+IPRD T +SRGFAFVRY EA A+ +DG VDGRE+ VQ AKYG P R
Sbjct: 21 DIYIPRDPYTFESRGFAFVRYCTDREADCAIRGMDGHKVDGREVRVQRAKYGRPTPNR 78
>gi|156098735|ref|XP_001615383.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148804257|gb|EDL45656.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 1057
Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 51/182 (28%), Positives = 91/182 (50%), Gaps = 15/182 (8%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLL+ N++F T+ + + +F +G++ D+++P D T RGF FV Y A++A+
Sbjct: 7 SLLIKNLSFHTSPEKIRKIFQSFGRIRDVYLPLDHYTRRPRGFGFVEYYEPQYAKEALTI 66
Query: 77 LDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRD-RSTGQGVAVLGEDTEMITEIEIIE 135
L+ +DG+EI + A+ N + E + + + T G V G + TE+E +
Sbjct: 67 LNHSKIDGKEIKIIIAQ---NRRKSPETMKMYQHGAQGTPIGATVGGSER---TEVEADQ 120
Query: 136 GGVTVEAGIGTNVTDTVGGIEITVDEVEAEVPVLITPEAVAEADMMIIAGVLVDRLAVPP 195
G NV + + IE+ + EV AE V + E +AE ++A V+ + +
Sbjct: 121 -----PKGGDANVIEVM--IEV-MSEVMAEAMVEVIAEVMAEVMAEVMAEVMTEAMTEEK 172
Query: 196 QL 197
+L
Sbjct: 173 KL 174
>gi|449541007|gb|EMD31994.1| hypothetical protein CERSUDRAFT_119299 [Ceriporiopsis subvermispora
B]
Length = 291
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 52/80 (65%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D +L V NI+ T +DL LF ++G+V +++ RDR TG +GFAFV ++ +AQ A
Sbjct: 207 DMPTLRVTNISEDTQENDLRELFSRFGRVARVYVGRDRETGAGKGFAFVSFESKGDAQLA 266
Query: 74 VDRLDGRVVDGREITVQFAK 93
++++ GR D ++VQ+++
Sbjct: 267 MEKMHGRGYDNLILSVQWSQ 286
>gi|159470953|ref|XP_001693621.1| SR protein factor [Chlamydomonas reinhardtii]
gi|158283124|gb|EDP08875.1| SR protein factor [Chlamydomonas reinhardtii]
Length = 286
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 51/79 (64%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL+V N+ +DL F+KYG++ D++IPRD T RGF F+ +K +A+ A+
Sbjct: 52 SLVVRNLPLDIRMEDLRAKFEKYGELKDVYIPRDYYTQRPRGFGFIEFKETRDAEDAMYN 111
Query: 77 LDGRVVDGREITVQFAKYG 95
LD VV+GREI+V F++ G
Sbjct: 112 LDRSVVNGREISVTFSREG 130
>gi|46115998|ref|XP_384017.1| hypothetical protein FG03841.1 [Gibberella zeae PH-1]
Length = 1163
Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/77 (41%), Positives = 45/77 (58%)
Query: 20 VLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDG 79
V N+ + TT D L F YG+++D + RDR TG SRGF FV + + EA+ A+ L+
Sbjct: 7 VGNLGWNTTDDSLRNAFQDYGQILDSIVMRDRDTGRSRGFGFVTFGSSQEAETAIISLNE 66
Query: 80 RVVDGREITVQFAKYGP 96
+ +DGR I V A P
Sbjct: 67 QELDGRRIKVNLANARP 83
>gi|225156280|ref|ZP_03724758.1| RNP-1 like RNA-binding protein [Diplosphaera colitermitum TAV2]
gi|224803012|gb|EEG21257.1| RNP-1 like RNA-binding protein [Diplosphaera colitermitum TAV2]
Length = 106
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N++F T+ DL F G + D+F+ DR TG RGFAFV + A+E+Q A ++L
Sbjct: 5 LYVGNLSFNTSEADLRTAFSTCGTLTDVFLATDRETGRPRGFAFVTFDTAEESQLATEKL 64
Query: 78 DGRVVDGREITVQFAK 93
+G + GR ITV A+
Sbjct: 65 NGTDLGGRAITVNEAR 80
>gi|221048043|gb|ACL98129.1| hyperosmotic glycine rich protein [Epinephelus coioides]
Length = 175
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 52/89 (58%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
++D L + ++F T + L F KYG + + + RD+ TG SRGF FV+Y D+A+
Sbjct: 1 MSDEGKLFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNCDDAK 60
Query: 72 KAVDRLDGRVVDGREITVQFAKYGPNAER 100
A++ ++G+ +DGR I V A G + R
Sbjct: 61 DALEGMNGKTLDGRAIRVDEAGKGGRSNR 89
>gi|220910060|ref|YP_002485371.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7425]
gi|219866671|gb|ACL47010.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7425]
Length = 99
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 3/98 (3%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+++ T +DL F +YG V + +P DR TG RGFAFV +DE A++
Sbjct: 2 SIYVGNLSYSVTQNDLIQAFTEYGSVKSVHLPTDRETGRLRGFAFVEMSTSDEETAAIEA 61
Query: 77 LDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDRST 114
LDG GR++ V A+ P +R G + S++RS+
Sbjct: 62 LDGAEWMGRDLKVNKAR--PREDRSGSGNWS-SQNRSS 96
>gi|388511713|gb|AFK43918.1| unknown [Lotus japonicus]
Length = 141
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 2 SHFGRSGPPDITD----TYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSR 57
S F +GPP + +L V + RTT + L F K+G+VV + DR +G S+
Sbjct: 26 SPFTLTGPPTTRQMGEPSTNLFVSGLNKRTTTEKLREEFAKFGEVVHARVVTDRVSGYSK 85
Query: 58 GFAFVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGP 96
GF FV+Y +EA K + +DG+ +DG I ++AK P
Sbjct: 86 GFGFVKYATIEEASKGIQGMDGKFLDGWVIFAEYAKSSP 124
>gi|154341070|ref|XP_001566488.1| putative RNA-binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063811|emb|CAM40000.1| putative RNA-binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 619
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V + T DD+ LF +YG ++ + RD TG+S G AFVRY +EA+ A+
Sbjct: 68 NLFVRKLASAVTEDDMRRLFGQYGTIISFALMRDIYTGESLGTAFVRYSTHEEARSAMAA 127
Query: 77 LDGRVVDGREITVQFAK 93
LDG + GR I++Q+AK
Sbjct: 128 LDGHELYGRPISIQWAK 144
>gi|449268059|gb|EMC78930.1| putative RNA-binding protein 19, partial [Columba livia]
Length = 922
Score = 64.3 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 43/74 (58%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
+ ++ L V N+ F +T +DL +F KYG + DI P DR T +GFAFV Y + A
Sbjct: 402 LAESGRLFVRNLPFTSTEEDLEKIFSKYGPLSDIHFPIDRLTKKPKGFAFVTYMIPEHAV 461
Query: 72 KAVDRLDGRVVDGR 85
KA LDG+V GR
Sbjct: 462 KAYAELDGQVFQGR 475
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/101 (34%), Positives = 48/101 (47%), Gaps = 9/101 (8%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGD---SRGFAFVRYKYADEAQKA 73
+L + N+ F TT D L F K G V I + + S GF FV YK + AQKA
Sbjct: 725 TLFIKNLNFATTEDTLRETFSKVGAVKSCTISKKKDKAGALLSMGFGFVEYKKPEGAQKA 784
Query: 74 VDRLDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDRST 114
+ RL G VDG ++ V+ +ER + SR + T
Sbjct: 785 LRRLQGCTVDGHKLEVKI------SERALRPTVKSSRKKQT 819
Score = 44.7 bits (104), Expect = 0.043, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 15 TYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRR-TGDSRGFAFVRYKYADEAQKA 73
T +LV NI F+ T ++ LF +G++ + +P+ TG RGF FV + +A+KA
Sbjct: 825 TSKILVRNIPFQATVREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDFLTKQDAKKA 884
Query: 74 VDRL-DGRVVDGREITVQFAKYGPNAERIKEGLLNH 108
+ L + GR + +++A E ++ +H
Sbjct: 885 FNALCHSTHLYGRRLVLEWADTEETVEALRRKTADH 920
Score = 39.3 bits (90), Expect = 1.8, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L+V N+ + LF +G + D + + + G R F F+ YK DEAQ A++
Sbjct: 4 LIVKNLPNGMKEERFRKLFAAFGTLTDCCL-KFTKDGKFRKFGFIGYKSEDEAQMALNHF 62
Query: 78 DGRVVDGREITVQFAK 93
+ +D ITV+ K
Sbjct: 63 NRSFIDTSRITVELCK 78
>gi|440789720|gb|ELR11019.1| RNA binding protein, putative [Acanthamoeba castellanii str. Neff]
Length = 838
Score = 64.3 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 46/83 (55%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
DT L V N+ F + DDL+ LF K+G + ++ IP DR T RG A+V + + A +A
Sbjct: 325 DTGRLFVRNLPFSASEDDLYKLFKKHGDISEVHIPIDRETKKPRGMAYVTFMLPEVAAQA 384
Query: 74 VDRLDGRVVDGREITVQFAKYGP 96
LDG + GR + + AK P
Sbjct: 385 HAALDGSIFQGRLLHIMPAKMAP 407
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 17/131 (12%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPR--DRRTGD---SRGFAFVRYKYADEAQ 71
+L V N+ F+TT D L +F+K V + + + D + G S G+ FV + D A
Sbjct: 638 TLYVKNLNFKTTDDGLRTMFEKVAPVRSVTVAKRKDVKKGGQMISLGYGFVEFVKRDGAL 697
Query: 72 KAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDRSTGQGVAVLGEDTEMITEI 131
KA+ +L G+ +D + + FAK G A+ ++ S R QG T+M
Sbjct: 698 KAIKQLQGKQLDNHALEITFAKGGRKADTKQQ-----SNKRKAAQG-------TQMKPTC 745
Query: 132 EIIEGGVTVEA 142
I+ V EA
Sbjct: 746 TILVKNVAFEA 756
Score = 46.6 bits (109), Expect = 0.010, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 15 TYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAV 74
T ++LV N+ F T ++ LF +G++ + +P+ + G +RGFAFV + EA+ A
Sbjct: 744 TCTILVKNVAFEATKAEIRELFATFGQLKSVRVPK-KMDGRARGFAFVDFITKQEAKNAF 802
Query: 75 DRLDGRVVDGREITVQFAK 93
L + GR + ++F +
Sbjct: 803 QSLQDTHLYGRHLVLEFVQ 821
>gi|219118652|ref|XP_002180094.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408351|gb|EEC48285.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 106
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 49/77 (63%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLL+ N+ + DL F + G+V D++IPRD + +GFAF+ Y A++A++A D
Sbjct: 19 SLLIRNVAPDIQSQDLLTAFGRIGEVRDVYIPRDFHSQQPKGFAFIEYATAEQAREARDE 78
Query: 77 LDGRVVDGREITVQFAK 93
+D VV GRE+ V FA+
Sbjct: 79 MDRFVVRGRELEVVFAQ 95
>gi|12323160|gb|AAG51556.1|AC027034_2 unknown protein; 47745-45927 [Arabidopsis thaliana]
Length = 220
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL F+++G V DI++PRD TGD RGF FV++ +A A
Sbjct: 37 SLLVRNLRHDCRQEDLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHH 96
Query: 77 LDGRVVDGREITVQFAK 93
+DG ++ GRE+TV FA+
Sbjct: 97 MDGYLLLGRELTVVFAE 113
>gi|390480607|ref|XP_003735962.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Callithrix
jacchus]
Length = 123
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 9/107 (8%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS + R PP+ SL V N+ T ++DL F +YG +VD+++P D T RGFA
Sbjct: 1 MSRYLR--PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFA 54
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFA---KYGPNAERIKEG 104
+V+++ +A+ A+ LD + + GR+I +QFA + PN + KEG
Sbjct: 55 YVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKDKEG 101
>gi|389746476|gb|EIM87656.1| translation initiation factor 3 RNA-binding subunit [Stereum
hirsutum FP-91666 SS1]
Length = 298
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D +L V NI+ T +DL LF +G+V +++ RDR TG +GFAFV ++ AQKA
Sbjct: 214 DLPTLRVTNISEDTQENDLRDLFGTFGRVARVYVGRDRETGIGKGFAFVSFEDKSTAQKA 273
Query: 74 VDRLDGRVVDGREITVQFAK 93
+D++ GR D + VQ+++
Sbjct: 274 MDKMHGRGYDSLILNVQWSQ 293
>gi|115461392|ref|NP_001054296.1| Os04g0682400 [Oryza sativa Japonica Group]
gi|113565867|dbj|BAF16210.1| Os04g0682400 [Oryza sativa Japonica Group]
Length = 1008
Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 48/84 (57%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
P TD L V N++ D L LF +G+V + + +D TG S+G+ FV+Y
Sbjct: 381 PSKETDMAKLYVCNLSLSMNTDRLIHLFLPFGEVTNAKVAKDHTTGLSKGYGFVQYSSPH 440
Query: 69 EAQKAVDRLDGRVVDGREITVQFA 92
A +AV L+GR+VDGR+I V+ +
Sbjct: 441 HAAEAVIHLNGRLVDGRKIEVRVS 464
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D +L V N+ + L LF +G++V + D TG S+G+ FV+Y A +A
Sbjct: 291 DNTNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEA 350
Query: 74 VDRLDGRVVDGREITVQFAKYGPNAE 99
+ R++GR+V+G + V+ + P++E
Sbjct: 351 IKRMNGRLVEGTALKVRVTGF-PSSE 375
Score = 45.4 bits (106), Expect = 0.023, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 43/85 (50%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D +L V N+ L LF +GK+ + D T ++G+ F+++ ++ A KA
Sbjct: 499 DMSNLYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATKA 558
Query: 74 VDRLDGRVVDGREITVQFAKYGPNA 98
+ ++G +V G I V+ A P+A
Sbjct: 559 IAAMNGALVGGEMIIVRVAGLSPSA 583
Score = 41.6 bits (96), Expect = 0.38, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 43/85 (50%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D +L V ++ + L LF G++ + +R TG S+GF FV++ A A A
Sbjct: 782 DMTNLYVSHLPSYVNNERLIDLFLPCGQITQAKVVVERYTGVSKGFGFVKFADAYSAAVA 841
Query: 74 VDRLDGRVVDGREITVQFAKYGPNA 98
+ ++G +DG + V+ A P+A
Sbjct: 842 LTHMNGYPLDGHVLEVRIAGVHPDA 866
>gi|428203936|ref|YP_007082525.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
gi|427981368|gb|AFY78968.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
Length = 97
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 45/77 (58%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+++ T DL +F +YG V + IP DR TG RGFAFV + A E A++
Sbjct: 2 SIFVGNLSYEVTQADLNSVFAEYGSVKRVHIPTDRETGRMRGFAFVEMETAAEETSAIEA 61
Query: 77 LDGRVVDGREITVQFAK 93
LDG GRE+ V AK
Sbjct: 62 LDGAEWYGREMKVNQAK 78
>gi|242076828|ref|XP_002448350.1| hypothetical protein SORBIDRAFT_06g025590 [Sorghum bicolor]
gi|241939533|gb|EES12678.1| hypothetical protein SORBIDRAFT_06g025590 [Sorghum bicolor]
Length = 217
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 51/81 (62%)
Query: 13 TDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
D S+ V N++ T+ DLF LF K+G V F+ +DRRTG SRGF FV + + ++ ++
Sbjct: 134 NDENSIRVNNLSEDTSEFDLFELFSKFGPVNRAFVAKDRRTGSSRGFGFVNFVHREDGER 193
Query: 73 AVDRLDGRVVDGREITVQFAK 93
A+ +L+G D + V++++
Sbjct: 194 AISKLNGYGYDNLILRVEWSE 214
>gi|222629794|gb|EEE61926.1| hypothetical protein OsJ_16667 [Oryza sativa Japonica Group]
Length = 1011
Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 48/84 (57%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
P TD L V N++ D L LF +G+V + + +D TG S+G+ FV+Y
Sbjct: 384 PSKETDMAKLYVCNLSLSMNTDRLIHLFLPFGEVTNAKVAKDHTTGLSKGYGFVQYSSPH 443
Query: 69 EAQKAVDRLDGRVVDGREITVQFA 92
A +AV L+GR+VDGR+I V+ +
Sbjct: 444 HAAEAVIHLNGRLVDGRKIEVRVS 467
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D +L V N+ + L LF +G++V + D TG S+G+ FV+Y A +A
Sbjct: 294 DNTNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEA 353
Query: 74 VDRLDGRVVDGREITVQFAKYGPNAE 99
+ R++GR+V+GR + V+ A + P++E
Sbjct: 354 IKRMNGRLVEGRALEVRVAGF-PSSE 378
Score = 45.4 bits (106), Expect = 0.023, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 43/85 (50%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D +L V N+ L LF +GK+ + D T ++G+ F+++ ++ A KA
Sbjct: 502 DMSNLYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATKA 561
Query: 74 VDRLDGRVVDGREITVQFAKYGPNA 98
+ ++G +V G I V+ A P+A
Sbjct: 562 IAAMNGALVGGEMIIVRVAGLSPSA 586
Score = 41.6 bits (96), Expect = 0.38, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 43/85 (50%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D +L V ++ + L LF G++ + +R TG S+GF FV++ A A A
Sbjct: 785 DMTNLYVSHLPSYVNNERLIDLFLPCGQITQAKVVVERYTGVSKGFGFVKFADAYSAAVA 844
Query: 74 VDRLDGRVVDGREITVQFAKYGPNA 98
+ ++G +DG + V+ A P+A
Sbjct: 845 LTHMNGYPLDGHVLEVRIAGVHPDA 869
>gi|215734873|dbj|BAG95595.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 478
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL V N+ +D+ F K+G V D+++P+D TG+ RGFAFV + ++ +A KA
Sbjct: 36 SLFVSNLPRSCRPEDVQVPFQKFGPVRDVYLPKDYNTGEPRGFAFVEFAHSSDASKARYH 95
Query: 77 LDGRVVDGREITVQFA 92
++ +++ GREI+V FA
Sbjct: 96 MNRKMLSGREISVAFA 111
>gi|294946599|ref|XP_002785125.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239898581|gb|EER16921.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 114
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 57/109 (52%), Gaps = 14/109 (12%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
+ D +S+ V I R DDL F K+G++ D+FIP DR TG SRGF FVR+ +A+
Sbjct: 6 LNDLFSIKVDGIDERVRKDDLREAFSKFGEIGDVFIPLDRYTGVSRGFGFVRFYERRDAE 65
Query: 72 KAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDRSTGQGVAV 120
A+ +D + G TV A Y +++ S GQGV++
Sbjct: 66 DAIRDMDNKEFQGCRHTVAAAMY--------------NKESSYGQGVSI 100
>gi|218195846|gb|EEC78273.1| hypothetical protein OsI_17967 [Oryza sativa Indica Group]
Length = 1001
Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 48/84 (57%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
P TD L V N++ D L LF +G+V + + +D TG S+G+ FV+Y
Sbjct: 385 PSKETDMAKLYVCNLSLSMNTDRLIHLFLPFGEVTNAKVAKDHTTGLSKGYGFVQYSSPH 444
Query: 69 EAQKAVDRLDGRVVDGREITVQFA 92
A +AV L+GR+VDGR+I V+ +
Sbjct: 445 HAAEAVIHLNGRLVDGRKIEVRVS 468
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D +L V N+ + L LF +G++V + D TG S+G+ FV+Y A +A
Sbjct: 295 DNTNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEA 354
Query: 74 VDRLDGRVVDGREITVQFAKYGPNAE 99
+ R++GR+V+GR + V+ A + P++E
Sbjct: 355 IKRMNGRLVEGRALEVRVAGF-PSSE 379
Score = 45.4 bits (106), Expect = 0.023, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 43/85 (50%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D +L V N+ L LF +GK+ + D T ++G+ F+++ ++ A KA
Sbjct: 492 DMSNLYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATKA 551
Query: 74 VDRLDGRVVDGREITVQFAKYGPNA 98
+ ++G +V G I V+ A P+A
Sbjct: 552 IAAMNGALVGGEMIIVRVAGLSPSA 576
Score = 41.6 bits (96), Expect = 0.38, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 43/85 (50%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D +L V ++ + L LF G++ + +R TG S+GF FV++ A A A
Sbjct: 775 DMTNLYVSHLPSYVNNERLIDLFLPCGQITQAKVVVERYTGVSKGFGFVKFADAYSAAVA 834
Query: 74 VDRLDGRVVDGREITVQFAKYGPNA 98
+ ++G +DG + V+ A P+A
Sbjct: 835 LTHMNGYPLDGHVLEVRIAGVHPDA 859
>gi|307180956|gb|EFN68744.1| Probable RNA-binding protein 19 [Camponotus floridanus]
Length = 903
Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 52/91 (57%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
+I ++ + + N+T+ T DD+ LF+KYG + ++ +P DR T +GF V + + A
Sbjct: 357 NIAESGRMFIRNLTYTITEDDIRKLFEKYGPLSEVNLPVDRVTRKPKGFGTVTFLMPEHA 416
Query: 71 QKAVDRLDGRVVDGREITVQFAKYGPNAERI 101
KA LDG V+DGR + + AK + E I
Sbjct: 417 LKAYSELDGTVLDGRMLHILPAKMKASLEDI 447
Score = 44.7 bits (104), Expect = 0.044, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFI-----PRDRRTGDSRGFAFVR 63
PP+ DT +L V NI F TT + L F K G + I I P + S G+ FVR
Sbjct: 671 PPE-PDT-TLFVKNINFSTTEEQLKDYFGKCGPLHYITIATKKDPENPTNKLSMGYGFVR 728
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQ 90
YK +A +A+ L V+DG+ + ++
Sbjct: 729 YKRKHDADRALKTLQMSVLDGKSLELK 755
Score = 42.4 bits (98), Expect = 0.19, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDR-RTGDSRGFAFVRYKYADEAQKAVDR 76
+LV NI F+ T ++ LF YG++ + +P+ T RGF F+ Y +A+KA
Sbjct: 782 ILVRNIPFQATLQEITELFKSYGELKAVRLPKKLVGTEKHRGFGFIEYYTKTDAKKAFKA 841
Query: 77 L-DGRVVDGREITVQFAKYGPNAERIKE 103
L + GR + +++A+ E I++
Sbjct: 842 LCQSTHLYGRRLVLEWAQAEEGIEEIRK 869
>gi|302762278|ref|XP_002964561.1| hypothetical protein SELMODRAFT_81392 [Selaginella moellendorffii]
gi|302814304|ref|XP_002988836.1| hypothetical protein SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300143407|gb|EFJ10098.1| hypothetical protein SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300168290|gb|EFJ34894.1| hypothetical protein SELMODRAFT_81392 [Selaginella moellendorffii]
Length = 149
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%)
Query: 15 TYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAV 74
+ L + + + T L F +G+++++ + +DR TG SRGF FV Y EAQKA+
Sbjct: 36 SSKLFIGGLAWGTEERGLRDAFSPFGEIIEVRVIQDRETGRSRGFGFVSYITDQEAQKAM 95
Query: 75 DRLDGRVVDGREITVQFA 92
+ +DGRV+DGR I V +A
Sbjct: 96 EAMDGRVLDGRTIRVNYA 113
>gi|408794570|ref|ZP_11206175.1| hypothetical protein LEP1GSC017_3646 [Leptospira meyeri serovar
Hardjo str. Went 5]
gi|408461805|gb|EKJ85535.1| hypothetical protein LEP1GSC017_3646 [Leptospira meyeri serovar
Hardjo str. Went 5]
Length = 89
Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 49/76 (64%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ V N+ F +++ +F YG + D+ + DR TG+ RGFAF+ Y +EA++AV ++
Sbjct: 6 IYVGNLKFTLKEENIRQIFSVYGVIQDLKMIHDRETGNFRGFAFITYANPEEAEEAVTQM 65
Query: 78 DGRVVDGREITVQFAK 93
+G+ VDGR + V FA+
Sbjct: 66 NGQPVDGRNLKVTFAE 81
>gi|320581887|gb|EFW96106.1| multiple RNA-binding domain-containing protein 1 [Ogataea
parapolymorpha DL-1]
Length = 824
Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 45/74 (60%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
I+ T L + NI + T DD LF YG + ++ I D RTG+S+GFA+V++ AD+A
Sbjct: 298 ISQTGRLFLRNILYSATEDDFRELFGTYGSLDEVHIAVDTRTGNSKGFAYVKFTSADDAV 357
Query: 72 KAVDRLDGRVVDGR 85
KA LD ++ GR
Sbjct: 358 KAYLELDKQIFQGR 371
Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
++V N+ F +T +D+F LF +G + + +P+ + +RGFAFV + EA+ A+D+L
Sbjct: 703 IIVKNLAFESTRNDIFELFSPFGNLKSVRVPK-KFDKSARGFAFVEFSTLKEAESAMDQL 761
Query: 78 DGRVVDGREITVQFA 92
G + GR + + FA
Sbjct: 762 QGVHLLGRRLVMDFA 776
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 38/130 (29%), Positives = 59/130 (45%), Gaps = 24/130 (18%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
++V + T D L F K G V D+ + R+R+ G+SR FAF+ Y+ +A+ AV
Sbjct: 4 IIVKGLPLYYTEDKLKTHFQKKGVVTDVKLVRNRQ-GESRRFAFIGYRSQQDAENAVKYF 62
Query: 78 DGRVVDGREITVQFAK---------------------YGPNAERIK--EGLLNHSRDRST 114
D +D I+VQ AK E++K E + N R+++T
Sbjct: 63 DKTFIDTARISVQPAKTFSDPTVPLPWREKRLQAKRQLQETEEKLKKLEEIQNKRRNKNT 122
Query: 115 GQGVAVLGED 124
+GV ED
Sbjct: 123 KKGVDAFIED 132
Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 10/91 (10%)
Query: 7 SGPPDITDTYSLLVLNITFRTTADDLFPLFDKY-GKVVDIFI--PRDRRTG--DSRGFAF 61
SGP T S+ V N+ F TT ++L F G VV + P +RTG S GF F
Sbjct: 596 SGP-----TVSVFVKNLNFSTTTNELTATFKSLPGFVVAVVRTRPDPKRTGKTQSMGFGF 650
Query: 62 VRYKYADEAQKAVDRLDGRVVDGREITVQFA 92
V +K ++A+ A+ ++G ++DG ++ ++ +
Sbjct: 651 VEFKTKEQAENAIKIMNGHLLDGHQLQLKLS 681
>gi|240254274|ref|NP_001031195.4| SC35-like splicing factor 33 [Arabidopsis thaliana]
gi|332195102|gb|AEE33223.1| SC35-like splicing factor 33 [Arabidopsis thaliana]
Length = 220
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL F+++G V DI++PRD TGD RGF FV++ +A A
Sbjct: 37 SLLVRNLRHDCRQEDLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHH 96
Query: 77 LDGRVVDGREITVQFAK 93
+DG ++ GRE+TV FA+
Sbjct: 97 MDGYLLLGRELTVVFAE 113
>gi|255090217|gb|ACU00434.1| RNA binding protein [Schistosoma japonicum]
Length = 70
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 5 GRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRY 64
GRS PP I SL V N+ ++TT DDL +F ++G+V DI+IPRD T +SRGFAFVRY
Sbjct: 1 GRS-PPRIYGMVSLKVDNLVYKTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVRY 59
Query: 65 KYADEAQKAV 74
EA A+
Sbjct: 60 CTDREADCAI 69
>gi|90399074|emb|CAJ86296.1| H0124B04.13 [Oryza sativa Indica Group]
Length = 913
Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 48/84 (57%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
P TD L V N++ D L LF +G+V + + +D TG S+G+ FV+Y
Sbjct: 297 PSKETDMAKLYVCNLSLSMNTDRLIHLFLPFGEVTNAKVAKDHTTGLSKGYGFVQYSSPH 356
Query: 69 EAQKAVDRLDGRVVDGREITVQFA 92
A +AV L+GR+VDGR+I V+ +
Sbjct: 357 HAAEAVIHLNGRLVDGRKIEVRVS 380
Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D +L V N+ + L LF +G++V + D TG S+G+ FV+Y A +A
Sbjct: 207 DNTNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEA 266
Query: 74 VDRLDGRVVDGREITVQFAKYGPNAE 99
+ R++GR+V+GR + V+ A + P++E
Sbjct: 267 IKRMNGRLVEGRALEVRVAGF-PSSE 291
Score = 45.4 bits (106), Expect = 0.023, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 43/85 (50%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D +L V N+ L LF +GK+ + D T ++G+ F+++ ++ A KA
Sbjct: 404 DMSNLYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATKA 463
Query: 74 VDRLDGRVVDGREITVQFAKYGPNA 98
+ ++G +V G I V+ A P+A
Sbjct: 464 IAAMNGALVGGEMIIVRVAGLSPSA 488
Score = 41.6 bits (96), Expect = 0.40, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 43/85 (50%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D +L V ++ + L LF G++ + +R TG S+GF FV++ A A A
Sbjct: 687 DMTNLYVSHLPSYVNNERLIDLFLPCGQITQAKVVVERYTGVSKGFGFVKFADAYSAAVA 746
Query: 74 VDRLDGRVVDGREITVQFAKYGPNA 98
+ ++G +DG + V+ A P+A
Sbjct: 747 LTHMNGYPLDGHVLEVRIAGVHPDA 771
>gi|38345560|emb|CAE03434.2| OSJNBa0032F06.17 [Oryza sativa Japonica Group]
Length = 924
Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 48/84 (57%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
P TD L V N++ D L LF +G+V + + +D TG S+G+ FV+Y
Sbjct: 297 PSKETDMAKLYVCNLSLSMNTDRLIHLFLPFGEVTNAKVAKDHTTGLSKGYGFVQYSSPH 356
Query: 69 EAQKAVDRLDGRVVDGREITVQFA 92
A +AV L+GR+VDGR+I V+ +
Sbjct: 357 HAAEAVIHLNGRLVDGRKIEVRVS 380
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D +L V N+ + L LF +G++V + D TG S+G+ FV+Y A +A
Sbjct: 207 DNTNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEA 266
Query: 74 VDRLDGRVVDGREITVQFAKYGPNAE 99
+ R++GR+V+G + V+ + P++E
Sbjct: 267 IKRMNGRLVEGTALKVRVTGF-PSSE 291
Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 43/85 (50%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D +L V N+ L LF +GK+ + D T ++G+ F+++ ++ A KA
Sbjct: 415 DMSNLYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATKA 474
Query: 74 VDRLDGRVVDGREITVQFAKYGPNA 98
+ ++G +V G I V+ A P+A
Sbjct: 475 IAAMNGALVGGEMIIVRVAGLSPSA 499
Score = 41.6 bits (96), Expect = 0.40, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 43/85 (50%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D +L V ++ + L LF G++ + +R TG S+GF FV++ A A A
Sbjct: 698 DMTNLYVSHLPSYVNNERLIDLFLPCGQITQAKVVVERYTGVSKGFGFVKFADAYSAAVA 757
Query: 74 VDRLDGRVVDGREITVQFAKYGPNA 98
+ ++G +DG + V+ A P+A
Sbjct: 758 LTHMNGYPLDGHVLEVRIAGVHPDA 782
>gi|380018594|ref|XP_003693212.1| PREDICTED: probable RNA-binding protein 19-like [Apis florea]
Length = 900
Score = 63.9 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 50/82 (60%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
I ++ + + N+++ TT DD+ LF+KYG + ++ +P DR T S+GF + + + A
Sbjct: 362 IAESGRMFIRNLSYTTTEDDIRKLFEKYGPLTEVNLPIDRITRKSKGFGTITFLMTEHAV 421
Query: 72 KAVDRLDGRVVDGREITVQFAK 93
KA LDG ++DGR + + AK
Sbjct: 422 KAYSELDGSILDGRMLHLLPAK 443
Score = 45.8 bits (107), Expect = 0.018, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTG--DSRGFAFVRYKYADEAQKAVD 75
+L+ N+ F+ TA+++ LF +G++ + +P+ + G RGFAFV Y EA+KA
Sbjct: 783 ILIRNVPFQATAEEITELFKAFGELKAVRLPK-KLVGVEKHRGFAFVEYYTKSEAKKAFK 841
Query: 76 RL-DGRVVDGREITVQFAKYGPNAERIKEGLLNH 108
L + GR + +++A+ E I++ H
Sbjct: 842 ALCQSTHLYGRRLVLEWAQTEEGVEDIRKRTAKH 875
Score = 44.3 bits (103), Expect = 0.049, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFI-----PRDRRTGDSRGFAFVRYKYADEAQ 71
+L V NI F TT + L FDK G + + I P++ S G+ FVRYK +A
Sbjct: 678 TLFVKNINFSTTDEQLKSYFDKCGPLHYVSIATKKDPKNPGAKLSMGYGFVRYKRKADAD 737
Query: 72 KAVDRLDGRVVDGREITVQ 90
+A+ L V+DG+ + ++
Sbjct: 738 RALKVLQMTVLDGKTLELK 756
>gi|395854840|ref|XP_003799887.1| PREDICTED: serine/arginine-rich splicing factor 10 [Otolemur
garnettii]
Length = 221
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 9/107 (8%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS + R PP+ SL V N+ T ++DL F +YG +VD+++P D T RGFA
Sbjct: 1 MSRYLR--PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFA 54
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFA---KYGPNAERIKEG 104
+V+++ +A+ A+ LD + + GR+I +QFA + PN + KEG
Sbjct: 55 YVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEG 101
>gi|327405345|ref|YP_004346183.1| RNP-1 like RNA-binding protein [Fluviicola taffensis DSM 16823]
gi|327320853|gb|AEA45345.1| RNP-1 like RNA-binding protein [Fluviicola taffensis DSM 16823]
Length = 224
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 45/76 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V + F TT + L LF+ YGKV + I +DR TG RGFAFV EA KA++
Sbjct: 3 SIFVAKLDFNTTEEQLKSLFEDYGKVNRVTIAKDRETGKPRGFAFVEMADESEADKAIEA 62
Query: 77 LDGRVVDGREITVQFA 92
LD V+GR I V+ A
Sbjct: 63 LDDSSVNGRNIAVKKA 78
>gi|300360554|ref|NP_001177938.1| serine/arginine-rich splicing factor 10 isoform 6 [Homo sapiens]
gi|332266733|ref|XP_003282352.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|332807985|ref|XP_001166490.2| PREDICTED: uncharacterized protein LOC456627 isoform 4 [Pan
troglodytes]
gi|344287392|ref|XP_003415437.1| PREDICTED: serine/arginine-rich splicing factor 10-like isoform 3
[Loxodonta africana]
gi|345793665|ref|XP_866416.2| PREDICTED: serine/arginine-rich splicing factor 10 isoform 5 [Canis
lupus familiaris]
gi|403287346|ref|XP_003934910.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
gi|410170861|ref|XP_003960063.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|426328343|ref|XP_004024962.1| PREDICTED: serine/arginine-rich splicing factor 10 [Gorilla gorilla
gorilla]
gi|194382312|dbj|BAG58911.1| unnamed protein product [Homo sapiens]
gi|410223012|gb|JAA08725.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
Length = 165
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 9/107 (8%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS + R PP+ SL V N+ T ++DL F +YG +VD+++P D T RGFA
Sbjct: 1 MSRYLR--PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFA 54
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFA---KYGPNAERIKEG 104
+V+++ +A+ A+ LD + + GR+I +QFA + PN + KEG
Sbjct: 55 YVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEG 101
>gi|285808363|gb|ADC35892.1| RNP-1 like RNA-binding protein [uncultured bacterium 246]
Length = 104
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V N++F+TT +L F+ YG++ I I DR TG +RGFAFV ++A KA+
Sbjct: 3 NVFVGNMSFQTTEGELRAAFETYGEIARIQIMTDRDTGQARGFAFVEMTNDEDAAKAIAG 62
Query: 77 LDGRVVDGREITVQFAKYGPNAERIKEG--LLNHSRDRST 114
L+G +DGR + V AK P + G +SRDR +
Sbjct: 63 LNGTQLDGRALNVNEAKPKPQGGGARGGNDRGGYSRDRGS 102
>gi|392562711|gb|EIW55891.1| translation initiation factor 3 RNA-binding subunit [Trametes
versicolor FP-101664 SS1]
Length = 292
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 50/77 (64%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V NI+ T +DL LF +G+V +++ RDR TG +GFAFV ++ AQKA+++
Sbjct: 211 TLRVTNISEDTQENDLRDLFGVFGRVARVYVGRDRETGAGKGFAFVSFEEKSSAQKAMEK 270
Query: 77 LDGRVVDGREITVQFAK 93
+ GR D ++VQ+++
Sbjct: 271 MHGRGYDNLILSVQWSQ 287
>gi|328952775|ref|YP_004370109.1| RNP-1 like RNA-binding protein [Desulfobacca acetoxidans DSM
11109]
gi|328453099|gb|AEB08928.1| RNP-1 like RNA-binding protein [Desulfobacca acetoxidans DSM
11109]
Length = 97
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 44/79 (55%)
Query: 15 TYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAV 74
+ L V N++F T + L LF + G V I DR+TG RGF FV + E +KA+
Sbjct: 2 SMKLYVGNLSFEMTEEQLGTLFSEAGPVTSAKIITDRQTGQPRGFGFVEMETKSEGRKAI 61
Query: 75 DRLDGRVVDGREITVQFAK 93
L+GR VDGR + V AK
Sbjct: 62 SMLNGRTVDGRPLAVNEAK 80
>gi|183221265|ref|YP_001839261.1| RNA binding protein [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189911356|ref|YP_001962911.1| RNA-binding protein [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167776032|gb|ABZ94333.1| RNA-binding protein [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167779687|gb|ABZ97985.1| RNA binding protein [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
Length = 89
Score = 63.5 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 48/76 (63%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ V N+ F +++ +F YG + D+ + DR TG+ RGFAF+ Y EA++AV ++
Sbjct: 6 IYVGNLKFSLKEENIRQIFSVYGAIQDLKMIHDRETGNFRGFAFITYASPSEAEEAVAQM 65
Query: 78 DGRVVDGREITVQFAK 93
+G+ +DGR + V FA+
Sbjct: 66 NGQPIDGRNLKVTFAE 81
>gi|162454265|ref|YP_001616632.1| RNA-binding protein [Sorangium cellulosum So ce56]
gi|161164847|emb|CAN96152.1| RNA-binding protein [Sorangium cellulosum So ce56]
Length = 138
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 46/79 (58%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N++F TT + L F G+V +I +P DR TG RGFAFV A A A+ +L
Sbjct: 5 LYVGNLSFSTTRETLESAFAAAGEVREIAMPTDRETGQPRGFAFVTMGSAQAANSAISQL 64
Query: 78 DGRVVDGREITVQFAKYGP 96
+G V+DGR + V A+ P
Sbjct: 65 NGAVLDGRALKVNEAQERP 83
>gi|427382637|ref|ZP_18879357.1| hypothetical protein HMPREF9447_00390 [Bacteroides oleiciplenus YIT
12058]
gi|425729882|gb|EKU92733.1| hypothetical protein HMPREF9447_00390 [Bacteroides oleiciplenus YIT
12058]
Length = 130
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V N+++ T +D L LF +YG+V +I DR TG SRGF FV ++ QKA+D
Sbjct: 2 NIYVANLSWNTNSDSLQELFTQYGEVTSAYIINDRETGRSRGFGFVEMPNDEDGQKAIDG 61
Query: 77 LDGRVVDGREITVQFAKYGPNAER 100
L+ +G+ I V A+ P ER
Sbjct: 62 LNETDFEGKTIAVSVAR--PRTER 83
>gi|407410696|gb|EKF33036.1| RNA-binding protein, putative [Trypanosoma cruzi marinkellei]
Length = 477
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 6 RSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYK 65
R D +L + NI + +L LF YG+++ + R+ TG+S G AFVRY
Sbjct: 105 RGSASDNQSRTNLFISNIPHKMEQRELENLFAPYGQILSAAVMRNIHTGNSLGTAFVRYA 164
Query: 66 YADEAQKAVDRLDGRVVDGREITVQFAK----YGPNAERIKE 103
+EA +A++ + G+ + GR I VQ+AK Y P E K+
Sbjct: 165 TTEEAMRAIEGMSGKRIGGRAIAVQWAKKQHDYAPVGEARKK 206
>gi|332807982|ref|XP_513202.3| PREDICTED: uncharacterized protein LOC456627 isoform 5 [Pan
troglodytes]
Length = 176
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 9/107 (8%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS + R PP+ SL V N+ T ++DL F +YG +VD+++P D T RGFA
Sbjct: 1 MSRYLR--PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFA 54
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFA---KYGPNAERIKEG 104
+V+++ +A+ A+ LD + + GR+I +QFA + PN + KEG
Sbjct: 55 YVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEG 101
>gi|297847894|ref|XP_002891828.1| hypothetical protein ARALYDRAFT_892527 [Arabidopsis lyrata subsp.
lyrata]
gi|297337670|gb|EFH68087.1| hypothetical protein ARALYDRAFT_892527 [Arabidopsis lyrata subsp.
lyrata]
Length = 289
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL F+++G V DI++PRD TGD RGF FV++ +A A
Sbjct: 37 SLLVRNLRHDCRQEDLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHH 96
Query: 77 LDGRVVDGREITVQFAK 93
+DG ++ GRE+TV FA+
Sbjct: 97 MDGYLLLGRELTVVFAE 113
>gi|255633638|gb|ACU17178.1| unknown [Glycine max]
Length = 196
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 44/79 (55%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L + +++ T L F KYG+VVD I DR TG SRGF F+ Y +EA A+ L
Sbjct: 44 LFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSAIQAL 103
Query: 78 DGRVVDGREITVQFAKYGP 96
DG+ + GR I V +A P
Sbjct: 104 DGQDLHGRPIRVNYANERP 122
>gi|367017792|ref|XP_003683394.1| hypothetical protein TDEL_0H03240 [Torulaspora delbrueckii]
gi|359751058|emb|CCE94183.1| hypothetical protein TDEL_0H03240 [Torulaspora delbrueckii]
Length = 167
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%)
Query: 7 SGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKY 66
S + D + + + T D+ +F +YG VD+F+ RDR TGDS+GF +++Y+
Sbjct: 25 SWHNEYKDRAYIFIGGLNVELTEADILTIFSQYGIPVDVFLVRDRETGDSKGFGYLKYED 84
Query: 67 ADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIK 102
A A+D L+G + GR I V A Y P + I+
Sbjct: 85 QRSAVLAIDNLNGSKIAGRIIKVDHAWYTPRDDMIE 120
>gi|225464267|ref|XP_002271224.1| PREDICTED: cold-inducible RNA-binding protein [Vitis vinifera]
gi|296088019|emb|CBI35302.3| unnamed protein product [Vitis vinifera]
Length = 170
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Query: 10 PDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADE 69
P I T L V ++FRTT + L F+ +G++V++ + D+ RGFAF+RY +E
Sbjct: 74 PSIPKT-RLYVSGLSFRTTEESLRNAFETFGQLVEVNLVMDKIANRPRGFAFLRYSTEEE 132
Query: 70 AQKAVDRLDGRVVDGREITVQFAK 93
++KA++ + G+ +DGR I V+ AK
Sbjct: 133 SEKAIEGMHGKFLDGRVIFVEVAK 156
>gi|324520554|gb|ADY47664.1| Serine/arginine-rich splicing factor 12 [Ascaris suum]
Length = 183
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 49/77 (63%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V + + +DL LF++ G V D++IP D T +SRGFA+V+Y+Y +A++A +
Sbjct: 15 TLYVRQVHYAARPEDLRTLFERMGPVRDVYIPLDYYTHESRGFAYVKYEYVGDAERAYKQ 74
Query: 77 LDGRVVDGREITVQFAK 93
L G + GR I + +A+
Sbjct: 75 LHGCAILGRRIAIDWAQ 91
>gi|118488717|gb|ABK96169.1| unknown [Populus trichocarpa]
Length = 241
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 47/79 (59%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ + I+F+T + L FDKYG VV+ I DR TG SRGF FV Y ++EA A+ +
Sbjct: 42 IFIGGISFQTDDNGLKEAFDKYGNVVEARIIMDRDTGRSRGFGFVTYTSSEEASSAIQAM 101
Query: 78 DGRVVDGREITVQFAKYGP 96
DG+ + GR + V +A P
Sbjct: 102 DGQDLHGRRVRVNYATERP 120
>gi|392593259|gb|EIW82584.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 116
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 46/80 (57%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
++ + V N+++ TT D L F +G VVD + RDR TG SRGF FV Y EA+ A
Sbjct: 2 NSAKIYVGNLSWNTTDDTLRQAFSTFGNVVDSVVMRDRDTGRSRGFGFVTYSSTQEAESA 61
Query: 74 VDRLDGRVVDGREITVQFAK 93
+ L+ + +DGR I V A
Sbjct: 62 ISGLNDQDLDGRRIKVNIAN 81
>gi|260826177|ref|XP_002608042.1| hypothetical protein BRAFLDRAFT_213668 [Branchiostoma floridae]
gi|229293392|gb|EEN64052.1| hypothetical protein BRAFLDRAFT_213668 [Branchiostoma floridae]
Length = 111
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 62/115 (53%), Gaps = 13/115 (11%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS + R PP+ SL V N+ T D+L LF KYG +VD++IP D T RGFA
Sbjct: 1 MSRYSR--PPNT----SLYVRNVPDGTRPDELRSLFGKYGPIVDVYIPLDHFTRHPRGFA 54
Query: 61 FVRYKY------ADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLLNHS 109
+V+Y + +A+ A+ LD GRE+ +QFA+ G + + G L H+
Sbjct: 55 YVQYPFLLTFEDVRDAEDAMYGLDRSRFYGRELEIQFAE-GDRKSKYRSGHLTHT 108
>gi|197097312|ref|NP_001125358.1| splicing factor, arginine/serine-rich 13A [Pongo abelii]
gi|55727814|emb|CAH90660.1| hypothetical protein [Pongo abelii]
Length = 262
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VD+++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFA---KYGPNAERIKEG 104
+A+ A+ LD + + GR+I +QFA + PN ++KEG
Sbjct: 63 DAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKVKEG 101
>gi|425461447|ref|ZP_18840925.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9808]
gi|389825682|emb|CCI24355.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9808]
Length = 97
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 53/101 (52%), Gaps = 12/101 (11%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+ F DD+ +F +YGK+ + +P DR TG RGFAFV + +E KA+
Sbjct: 2 SIYVGNLPFEVDQDDVVEVFKEYGKIKRVHLPMDRETGKKRGFAFVEMETPEEETKAIAA 61
Query: 77 LDGRVVDGREITVQFAKYGPNAERIKE-----GLLNHSRDR 112
LDG GRE+ V N R KE G N +RDR
Sbjct: 62 LDGAQWMGRELKV-------NQAREKEPKSSFGGGNRNRDR 95
>gi|15293081|gb|AAK93651.1| unknown protein [Arabidopsis thaliana]
Length = 263
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL F+++G V DI++PRD TGD RGF FV++ +A A
Sbjct: 37 SLLVRNLRHDCRQEDLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHH 96
Query: 77 LDGRVVDGREITVQFAK 93
+DG ++ GRE+TV FA+
Sbjct: 97 MDGYLLLGRELTVVFAE 113
>gi|290993156|ref|XP_002679199.1| RNA binding domain-containing protein [Naegleria gruberi]
gi|284092815|gb|EFC46455.1| RNA binding domain-containing protein [Naegleria gruberi]
Length = 763
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 50/96 (52%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
D DT L V N+ F TT D+L LF+ +G++ ++ IP D T SRG AFV + + A
Sbjct: 222 DDEDTGRLFVYNLHFTTTEDELKELFEPFGEISELHIPIDNETKISRGVAFVHFLIPENA 281
Query: 71 QKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLL 106
KA L + GR I + AK PN KE +
Sbjct: 282 DKAKKALHNSIFQGRMIHIAKAKEKPNFNVEKENMF 317
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L+V N+ F T DL LF YG+V + +P+ + RGFAF+ + E A L
Sbjct: 649 LVVRNVAFEATRQDLLQLFSAYGQVKTVRLPKKVGSNSHRGFAFIEFVSPKECHAAYQAL 708
Query: 78 DGRVVDGREITVQFA 92
+ GR + ++F+
Sbjct: 709 KHSHLYGRTLKIEFS 723
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 11/84 (13%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRR----TGDSRGFAFVRYKYADEAQKA 73
L + N+ F+TT D L LF Y PR R G S+GF F + EA KA
Sbjct: 543 LFIKNLNFKTTEDSLRELFKSYN-------PRSVRIVVENGKSKGFGFAEFNNVKEAVKA 595
Query: 74 VDRLDGRVVDGREITVQFAKYGPN 97
+ L +D + + ++ N
Sbjct: 596 HEELHNAQLDNHILVIHYSNIQSN 619
>gi|254564595|ref|XP_002489408.1| Splicing factor that reanneals U4 and U6 snRNPs during spliceosome
recycling [Komagataella pastoris GS115]
gi|238029204|emb|CAY67124.1| Splicing factor that reanneals U4 and U6 snRNPs during spliceosome
recycling [Komagataella pastoris GS115]
gi|328349837|emb|CCA36237.1| Squamous cell carcinoma antigen recognized by T-cells 3
[Komagataella pastoris CBS 7435]
Length = 865
Score = 63.5 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L + N+ F+ T +DL PLF+KYG++ I++P D T + GFAF+ +K D A+ A++
Sbjct: 673 LFIRNLDFKLTKEDLVPLFEKYGQIDKIYVPCDSETKKNNGFAFITFKEKDAAESALELN 732
Query: 78 DGRVVDGREITVQFAKYGPNAERIKE 103
++D R + V AK P + E
Sbjct: 733 SVPLLD-RPLDVSLAKKKPKKVSVLE 757
>gi|357478559|ref|XP_003609565.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
gi|355510620|gb|AES91762.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
Length = 314
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 50/75 (66%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LLV N+ +DL F++YG V D+++PR+ TG+ RGF FV+Y++ ++A +A +L
Sbjct: 50 LLVRNLPLDARPEDLRGPFERYGPVKDVYLPRNYYTGEPRGFGFVKYRHGEDAAEAKQQL 109
Query: 78 DGRVVDGREITVQFA 92
+ ++ GREI + FA
Sbjct: 110 NHTIIGGREIRIVFA 124
>gi|90079587|dbj|BAE89473.1| unnamed protein product [Macaca fascicularis]
Length = 219
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 9/107 (8%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS + R PP+ SL V N+ T ++DL F +YG +VD+++P D T RGFA
Sbjct: 1 MSRYLR--PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFA 54
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFA---KYGPNAERIKEG 104
+V+++ +A+ A+ LD + + GR+I +QFA + PN + KEG
Sbjct: 55 YVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEG 101
>gi|297842099|ref|XP_002888931.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297334772|gb|EFH65190.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 181
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 52/86 (60%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
L V ++FRTT D L F+++GK++ + + D+ RGFAF+RY+ +EA KA+
Sbjct: 78 KLYVSGLSFRTTEDTLRDTFEQFGKLIHMNLVMDKVANRPRGFAFLRYETEEEAMKAIQG 137
Query: 77 LDGRVVDGREITVQFAKYGPNAERIK 102
+ G+ +DGR I V+ AK + R K
Sbjct: 138 MHGKFLDGRVIFVEEAKTRSDISRAK 163
>gi|242046266|ref|XP_002461004.1| hypothetical protein SORBIDRAFT_02g039025 [Sorghum bicolor]
gi|241924381|gb|EER97525.1| hypothetical protein SORBIDRAFT_02g039025 [Sorghum bicolor]
Length = 83
Score = 63.5 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 48/76 (63%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ V ++F TT ++ +F +G V + + RD++TG +GF FV+Y EA+KAV +
Sbjct: 8 IFVSRLSFYTTEEEFKDVFSSFGTVEEARLMRDQQTGRIKGFGFVKYSSQAEAEKAVKAM 67
Query: 78 DGRVVDGREITVQFAK 93
DGR++ GR I V+ AK
Sbjct: 68 DGRILRGRLIFVEMAK 83
>gi|291514454|emb|CBK63664.1| RNA-binding proteins (RRM domain) [Alistipes shahii WAL 8301]
Length = 116
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V ++++ T+++ L LF ++G+V + DR TG SRGF FV +E QKA+D+
Sbjct: 2 NIYVSHLSWGTSSEGLGNLFMQFGEVASANVITDRETGRSRGFGFVEMPNEEEGQKAIDQ 61
Query: 77 LDGRVVDGREITVQFAKYGPNAER 100
L+G +G+ ITV A+ P ER
Sbjct: 62 LNGTSFEGQTITVNVAR--PREER 83
>gi|452819344|gb|EME26405.1| translation initiation factor eIF-3 subunit 4 [Galdieria
sulphuraria]
Length = 290
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D+ ++ V N++ TT DL LF +G + IFI +DR TG+ +GFAFV + ++A+K
Sbjct: 202 DSATVRVSNLSPNTTESDLQELFHPFGNIRRIFISKDRHTGEGKGFAFVAFSNREDARKC 261
Query: 74 VDRLDGRVVDGREITVQFAKYGPN 97
+++LDG D + ++AK N
Sbjct: 262 IEKLDGYGYDHLILRCEWAKPSEN 285
>gi|393906773|gb|EFO27553.2| hypothetical protein LOAG_00933 [Loa loa]
Length = 344
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 56/89 (62%)
Query: 5 GRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRY 64
GRSG + +L V + + DDL LF++ G V D++IP D T +SRGFA+V++
Sbjct: 3 GRSGRYRDDEIPTLYVRQVHYSARPDDLRALFERMGPVRDVYIPLDYYTRESRGFAYVKF 62
Query: 65 KYADEAQKAVDRLDGRVVDGREITVQFAK 93
++ +A+ A+ +L+G + GR I V++A+
Sbjct: 63 EFTRDAEDALRKLNGASILGRPIEVEWAE 91
>gi|328767903|gb|EGF77951.1| hypothetical protein BATDEDRAFT_27077 [Batrachochytrium
dendrobatidis JAM81]
Length = 106
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 10 PDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADE 69
P+ + V N+++ T + L F ++G+VVD + +DR TG SRGF FV + +
Sbjct: 5 PEAAPGTKVFVGNLSWGTDNNSLADAFSQFGEVVDSIVLKDRETGRSRGFGFVTFSSPES 64
Query: 70 AQKAVDRLDGRVVDGREITVQFAK----YGPNAERIKEGLLN 107
A AVD ++G+ ++GR I V A YG A+ EG N
Sbjct: 65 ASAAVDAMNGQDLNGRNIRVNLANERPAYGGGAQ---EGGFN 103
>gi|313231584|emb|CBY08698.1| unnamed protein product [Oikopleura dioica]
Length = 278
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 57/94 (60%), Gaps = 5/94 (5%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V N++ T DD+ LF K+GK+ I + RDRRT +SRGFAF+ + + D+AQ+A+D
Sbjct: 182 AIRVSNLSPAATQDDVQTLFAKFGKIARIHLGRDRRTNESRGFAFINFHHRDDAQRAIDT 241
Query: 77 LDGRVVDGREITVQFAKYGPNAERIKEGLLNHSR 110
++ D ++V++++ R KE S+
Sbjct: 242 MNRYGYDNLILSVEWSE-----NRKKENATEASK 270
>gi|326327708|pdb|2KXN|B Chain B, Nmr Structure Of Human Tra2beta1 Rrm In Complex With
Aagaac Rna
Length = 129
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + D+ I D+++ SRGFAFV
Sbjct: 36 HVGNRANPD--PNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFV 93
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D+A++A +R +G +DGR I V F+
Sbjct: 94 YFENVDDAKEAKERANGMELDGRRIRVDFS 123
>gi|113478076|ref|YP_724137.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
gi|110169124|gb|ABG53664.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
Length = 97
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+++ T +DL +F +YG V + +P DR TG RGF FV +E QKA+D
Sbjct: 2 SIYVGNLSYDVTQEDLSEVFAEYGTVKRVQLPTDRETGRPRGFGFVEMSSEEEEQKAIDA 61
Query: 77 LDGRVVDGREITVQFAKYGPNAER 100
LD GR+I V AK P ER
Sbjct: 62 LDSAEWMGRDIKVNKAK--PREER 83
>gi|410170863|ref|XP_003960064.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
Length = 146
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 9/107 (8%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS + R PP+ SL V N+ T ++DL F +YG +VD+++P D T RGFA
Sbjct: 1 MSRYLR--PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFA 54
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFA---KYGPNAERIKEG 104
+V+++ +A+ A+ LD + + GR+I +QFA + PN + KEG
Sbjct: 55 YVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEG 101
>gi|430745977|ref|YP_007205106.1| RRM domain-containing RNA-binding protein [Singulisphaera
acidiphila DSM 18658]
gi|430017697|gb|AGA29411.1| RRM domain-containing RNA-binding protein [Singulisphaera
acidiphila DSM 18658]
Length = 130
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V N+ + TT DDL LF+ YG V + + D+ +G SRGF FV + DEAQ A+D
Sbjct: 4 NIYVGNLPYDTTGDDLKQLFETYGAVSNGQVIIDKFSGRSRGFGFVEMDHDDEAQAAIDA 63
Query: 77 LDGRVVDGREITVQFAKYGPNAER 100
L+G GR +TV A+ P ER
Sbjct: 64 LNGTAYGGRPLTVNEAR--PRDER 85
>gi|226506948|ref|NP_001149776.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|195633803|gb|ACG36746.1| glycine-rich RNA-binding protein 7 [Zea mays]
Length = 276
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 45/76 (59%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V I+++T L F KYG+V++ I DR +G SRGF FV Y ++EA A+ L
Sbjct: 32 LFVGGISYQTDDHSLRDEFAKYGQVIEARIIIDRESGRSRGFGFVTYTSSEEASAAITAL 91
Query: 78 DGRVVDGREITVQFAK 93
DG+ +DGR I V A
Sbjct: 92 DGKTLDGRSIRVNHAN 107
>gi|240254272|ref|NP_564685.4| SC35-like splicing factor 33 [Arabidopsis thaliana]
gi|75337149|sp|Q9SEU4.1|SR33_ARATH RecName: Full=Serine/arginine-rich splicing factor 33; AltName:
Full=SC35-like splicing factor 33; Short=At-SCL33;
Short=AtSCL33
gi|6572475|gb|AAF17288.1|AF099940_1 Serine/arginine-rich protein [Arabidopsis thaliana]
gi|9843659|emb|CAC03603.1| SC35-like splicing factor SCL33, 33 kD [Arabidopsis thaliana]
gi|56744214|gb|AAW28547.1| At1g55310 [Arabidopsis thaliana]
gi|332195101|gb|AEE33222.1| SC35-like splicing factor 33 [Arabidopsis thaliana]
Length = 287
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL F+++G V DI++PRD TGD RGF FV++ +A A
Sbjct: 37 SLLVRNLRHDCRQEDLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHH 96
Query: 77 LDGRVVDGREITVQFAK 93
+DG ++ GRE+TV FA+
Sbjct: 97 MDGYLLLGRELTVVFAE 113
>gi|224008472|ref|XP_002293195.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971321|gb|EED89656.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 77
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/76 (43%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N++F TT + + LF++YG+V D F+P DR +G RGFAFV A EA+ A +
Sbjct: 1 LYVGNLSFETTEESVRGLFEQYGQVTDCFLPTDRDSGRVRGFAFVTMP-AKEAETACSKT 59
Query: 78 DGRVVDGREITVQFAK 93
+G +DGR + V A+
Sbjct: 60 NGAELDGRTLRVNEAQ 75
>gi|17508587|ref|NP_493023.1| Protein R09B3.3 [Caenorhabditis elegans]
gi|3879016|emb|CAB03237.1| Protein R09B3.3 [Caenorhabditis elegans]
Length = 85
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 46/78 (58%)
Query: 16 YSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVD 75
+S+ V N F+TT DDL F + G V ++ I DR TG RGFAFV + AQ+AVD
Sbjct: 4 FSVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVD 63
Query: 76 RLDGRVVDGREITVQFAK 93
+ +G +GR + V A+
Sbjct: 64 QFNGVDFNGRALRVNLAQ 81
>gi|332024948|gb|EGI65135.1| Putative RNA-binding protein 19 [Acromyrmex echinatior]
Length = 862
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/101 (30%), Positives = 55/101 (54%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
I ++ + + N+T+ TT DD+ LF+KYG + ++ +P DR T +GF + + + A
Sbjct: 317 IAESGRMFIRNLTYTTTEDDVRKLFEKYGPLSEVDLPIDRMTRKPKGFGTITFLMPEHAV 376
Query: 72 KAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDR 112
KA LDG ++DGR + + K + E I L + + +
Sbjct: 377 KAYSELDGSILDGRMLHILPGKTKTSLENIDTENLTYKQKK 417
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDR-RTGDSRGFAFVRYKYADEAQKAVDR 76
+LV NI F+ T ++ LF YG++ + +P+ T RGFAF+ Y +A+KA
Sbjct: 740 ILVRNIPFQATVQEVTELFKSYGELKAVRLPKKLVGTEKHRGFAFIEYYTKSDAKKAFKA 799
Query: 77 L-DGRVVDGREITVQFAKYGPNAERIKEGLLNH-SRDRSTGQ 116
L + GR + +++A+ E I++ + H ++ ST Q
Sbjct: 800 LCQSTHLYGRRLVLEWAQTEEGIEEIRKRTVKHFYQENSTKQ 841
Score = 43.9 bits (102), Expect = 0.080, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFI-----PRDRRTGDSRGFAFVR 63
PP+ +DT +L V NI F TT + L F K G + I I P + S G+ F+R
Sbjct: 629 PPE-SDT-TLFVKNINFSTTEEQLKDYFGKCGPLHYITIATKMDPENPAKKLSMGYGFIR 686
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQ 90
YK +A +A+ L V+DG+ + ++
Sbjct: 687 YKRKFDADRALKTLQMSVLDGKSLELK 713
>gi|168700972|ref|ZP_02733249.1| RNA-binding protein [Gemmata obscuriglobus UQM 2246]
Length = 117
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V N++F TT D+L LF +YG V I DR TG RGFAFV + +D ++A+
Sbjct: 2 NLYVGNMSFSTTEDELRELFSQYGTVTKAQIVMDRETGRPRGFAFV--EMSDGGEQAIQA 59
Query: 77 LDGRVVDGREITVQFAK 93
L+G V GR +TV AK
Sbjct: 60 LNGTQVGGRSLTVNEAK 76
>gi|74204113|dbj|BAE29044.1| unnamed protein product [Mus musculus]
gi|74211878|dbj|BAE29284.1| unnamed protein product [Mus musculus]
Length = 183
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 9/107 (8%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS + R PP+ SL V N+ T ++DL F +YG +VD+++P D T RGFA
Sbjct: 1 MSRYLR--PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFA 54
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFA---KYGPNAERIKEG 104
+V+++ +A+ A+ LD + + GR+I +QFA + PN + KEG
Sbjct: 55 YVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEG 101
>gi|4001722|dbj|BAA35093.1| neural specific sr protein NSSR 2 [Mus musculus]
Length = 183
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 9/107 (8%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS + R PP+ SL V N+ T ++DL F +YG +VD+++P D T RGFA
Sbjct: 1 MSRYLR--PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFA 54
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFA---KYGPNAERIKEG 104
+V+++ +A+ A+ LD + + GR+I +QFA + PN + KEG
Sbjct: 55 YVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEG 101
>gi|412988955|emb|CCO15546.1| Splicing factor, arginine/serine-rich 2 [Bathycoccus prasinos]
Length = 296
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 55/88 (62%)
Query: 6 RSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYK 65
+ GPPDI++ +S+ + N++F T +++ +F YG++ D+++PR+ T RGFAFVRY
Sbjct: 48 KKGPPDISNLHSVKIDNLSFDLTQEEITDMFASYGEIGDVYVPRNHHTQRMRGFAFVRYV 107
Query: 66 YADEAQKAVDRLDGRVVDGREITVQFAK 93
A A+D + + + GR I V A+
Sbjct: 108 EKQSADAAIDAMHEKEIAGRIIRVGMAE 135
>gi|162450147|ref|YP_001612514.1| RNA-binding protein [Sorangium cellulosum So ce56]
gi|161160729|emb|CAN92034.1| RNA-binding protein [Sorangium cellulosum So ce56]
Length = 95
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 46/79 (58%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N++F TT + L F G+V +I +P DR TG RGFAFV A A A+ +L
Sbjct: 5 LYVGNLSFNTTRETLESAFAAAGEVREIAMPTDRETGQPRGFAFVTMGTAQAANSAISQL 64
Query: 78 DGRVVDGREITVQFAKYGP 96
+G ++DGR + V A+ P
Sbjct: 65 NGAMLDGRTLKVNEAQERP 83
>gi|428169524|gb|EKX38457.1| hypothetical protein GUITHDRAFT_48511, partial [Guillardia theta
CCMP2712]
Length = 83
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 46/76 (60%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D+ + V + +R T D+ +F +YG+ VD+ +PRD++TG S GFAF+ Y+ A
Sbjct: 8 DSAYIYVGGLDYRLTEGDVITIFSQYGEPVDVHLPRDKKTGKSHGFAFLAYEDQRSTNLA 67
Query: 74 VDRLDGRVVDGREITV 89
VD L+G + GR + V
Sbjct: 68 VDNLNGSKLLGRTLRV 83
>gi|66809481|ref|XP_638463.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|74996868|sp|Q54PB2.1|MRD1_DICDI RecName: Full=Multiple RNA-binding domain-containing protein 1;
AltName: Full=RNA-binding motif protein 19 homolog;
AltName: Full=RNA-binding protein 19 homolog
gi|60467060|gb|EAL65101.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 895
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
D+ ++ + V N+++ T +DL +F K+GK+ +I IP D + S+G AF+ Y + A
Sbjct: 356 DVGESGRIFVRNLSYSTKEEDLEKVFSKFGKISEIHIPIDYDSKKSKGIAFILYLIPENA 415
Query: 71 QKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDRSTG 115
+A++ +DG+V GR I V K P A++ E N++ G
Sbjct: 416 VQALNDMDGKVFQGRLIHVLPGKAAP-AKQFSENKDNNNNGAEGG 459
Score = 53.9 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+++ N+ F +T ++ LF YG++ + IP+ + G RGF FV + +EA+ A++ L
Sbjct: 797 IIIKNLPFESTIKEIRKLFTAYGEIQSVRIPK-KPNGGHRGFGFVEFLTEEEAKNAMEAL 855
Query: 78 DGRVVDGREITVQFAKYGPNAERIKE 103
GR + +Q+A+ N + ++E
Sbjct: 856 GNSHFYGRHLVLQYAEQDKNIDELRE 881
>gi|428165677|gb|EKX34667.1| hypothetical protein GUITHDRAFT_119213 [Guillardia theta CCMP2712]
Length = 219
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
D ++L V N+ FR + +L LF+K+G+VV + + D+ +G RGF FV Y A
Sbjct: 130 DRKGAFTLFVGNLPFRISEAELQALFEKHGEVVSVSLIHDQESGRPRGFGFVDYDNEQSA 189
Query: 71 QKAVDRLDGRVVDGREITVQFA--KYGPN 97
+ AV L+G +DGREI+V + K+ N
Sbjct: 190 KDAVSNLNGMPLDGREISVSISEDKFAAN 218
>gi|397642327|gb|EJK75167.1| hypothetical protein THAOC_03118, partial [Thalassiosira oceanica]
Length = 452
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 10 PDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADE 69
P + L V N++F T + + +F++YG V D F+P DR TG RGFAFV A E
Sbjct: 122 PQGREDVKLYVGNLSFDTNEEAVRSMFEQYGTVSDCFLPSDRDTGRPRGFAFVTMP-AKE 180
Query: 70 AQKAVDRLDGRVVDGREITVQFAK 93
A+ A ++++G +DGR + V A+
Sbjct: 181 AETACNKVNGMELDGRTVRVNEAQ 204
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L + N+ + T L +F +G V D+F+P +R T RGF FV A+ A+ ++
Sbjct: 21 LYIGNLDYSTDEPQLRSVFGAFGAVTDVFLPMERGTSRPRGFGFVTLSTRQAAEDAIAKM 80
Query: 78 DGRVVDGREITVQFAK---YGPNAERIKE 103
D +DGR I V ++ GP A R E
Sbjct: 81 DQSQLDGRTIRVNESRPRGEGPGARRSNE 109
>gi|297834182|ref|XP_002884973.1| hypothetical protein ARALYDRAFT_478747 [Arabidopsis lyrata subsp.
lyrata]
gi|297330813|gb|EFH61232.1| hypothetical protein ARALYDRAFT_478747 [Arabidopsis lyrata subsp.
lyrata]
Length = 262
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL F+++G V DI++PRD TGD RGF F++Y +A +A
Sbjct: 38 SLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQYVDPADAAEAKHH 97
Query: 77 LDGRVVDGREITVQFAK 93
+DG + GRE+TV FA+
Sbjct: 98 MDGSHLLGRELTVVFAE 114
>gi|9843661|emb|CAC03604.1| SC35-like splicing factor SCL30a, 30a kD [Arabidopsis thaliana]
Length = 261
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 51/77 (66%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL F+++G V DI++PRD TGD RGF F+++ +A +A +
Sbjct: 38 SLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQFMDPADAAEAKHQ 97
Query: 77 LDGRVVDGREITVQFAK 93
+DG ++ GRE+TV FA+
Sbjct: 98 MDGYLLLGRELTVVFAE 114
>gi|373854326|ref|ZP_09597124.1| RNP-1 like RNA-binding protein [Opitutaceae bacterium TAV5]
gi|391231688|ref|ZP_10267894.1| RRM domain-containing RNA-binding protein [Opitutaceae bacterium
TAV1]
gi|372472193|gb|EHP32205.1| RNP-1 like RNA-binding protein [Opitutaceae bacterium TAV5]
gi|391221349|gb|EIP99769.1| RRM domain-containing RNA-binding protein [Opitutaceae bacterium
TAV1]
Length = 122
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N++F+T+ D+L F ++G V D+++ D+ TG RGFAFV +EA+ A ++L
Sbjct: 6 LYVGNMSFKTSEDELRSAFGQFGNVTDVYVAMDKMTGRPRGFAFVTMSTPEEAKIAAEKL 65
Query: 78 DGRVVDGREITVQFAK 93
+G + GR +TV A+
Sbjct: 66 NGVDLGGRALTVNEAR 81
>gi|116747535|ref|YP_844222.1| RNP-1 like RNA-binding protein [Syntrophobacter fumaroxidans
MPOB]
gi|116696599|gb|ABK15787.1| RNP-1 like RNA-binding protein [Syntrophobacter fumaroxidans
MPOB]
Length = 122
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%)
Query: 15 TYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAV 74
+ L V N++F+T+++ L LF + G V + DR +G SRGF FV +E QKA+
Sbjct: 2 SMKLYVGNLSFQTSSEQLRELFSQVGTVESATVVEDRESGRSRGFGFVEMSTKEEGQKAI 61
Query: 75 DRLDGRVVDGREITVQFAK 93
L+G+ +GR +TV AK
Sbjct: 62 AELNGKDFNGRPLTVNEAK 80
>gi|348570784|ref|XP_003471177.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Cavia
porcellus]
Length = 173
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 9/107 (8%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS + R PP+ SL V N+ T ++DL F +YG +VD+++P D T RGFA
Sbjct: 1 MSRYLR--PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFA 54
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFA---KYGPNAERIKEG 104
+V+++ +A+ A+ LD + + GR+I +QFA + PN + KEG
Sbjct: 55 YVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEG 101
>gi|301754964|ref|XP_002913325.1| PREDICTED: splicing factor, arginine/serine-rich 13A-like
[Ailuropoda melanoleuca]
gi|359318923|ref|XP_003638943.1| PREDICTED: serine/arginine-rich splicing factor 10 [Canis lupus
familiaris]
Length = 183
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 9/107 (8%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS + R PP+ SL V N+ T ++DL F +YG +VD+++P D T RGFA
Sbjct: 1 MSRYLR--PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFA 54
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFA---KYGPNAERIKEG 104
+V+++ +A+ A+ LD + + GR+I +QFA + PN + KEG
Sbjct: 55 YVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEG 101
>gi|72387123|ref|XP_843986.1| RNA-binding protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175980|gb|AAX70103.1| RNA-binding protein, putative [Trypanosoma brucei]
gi|70800518|gb|AAZ10427.1| RNA-binding protein, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 593
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V NI ++L LF YG+++ + R+ TGDS G AFVR+ ++AQ A++
Sbjct: 131 NLFVSNIPHLLGKNELVDLFSPYGEILSAAVMRNIHTGDSLGTAFVRFATTEQAQAAMEA 190
Query: 77 LDGRVVDGREITVQFAK 93
L G V++GR + VQ+AK
Sbjct: 191 LTGYVLEGRSMVVQWAK 207
>gi|268569468|ref|XP_002640530.1| Hypothetical protein CBG18692 [Caenorhabditis briggsae]
Length = 85
Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/77 (40%), Positives = 45/77 (58%)
Query: 16 YSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVD 75
YS+ V N F++T ++ F + G V ++ I DR TG RGFAFV Y AQ+AV+
Sbjct: 5 YSVYVGNAPFQSTEQEIGDFFSQKGNVTNVRIVYDRETGRPRGFAFVEYSDEQSAQRAVN 64
Query: 76 RLDGRVVDGREITVQFA 92
L+G +GR++ V A
Sbjct: 65 ELNGADFNGRQLRVNLA 81
>gi|5730079|ref|NP_006616.1| serine/arginine-rich splicing factor 10 isoform 1 [Homo sapiens]
gi|6753820|ref|NP_034308.1| serine/arginine-rich splicing factor 10 isoform 1 [Mus musculus]
gi|346986279|ref|NP_001231297.1| serine/arginine-rich splicing factor 10 isoform 2 [Sus scrofa]
gi|114554649|ref|XP_001166460.1| PREDICTED: uncharacterized protein LOC456627 isoform 3 [Pan
troglodytes]
gi|332266729|ref|XP_003282350.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|344287394|ref|XP_003415438.1| PREDICTED: serine/arginine-rich splicing factor 10-like isoform 4
[Loxodonta africana]
gi|403287342|ref|XP_003934908.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
gi|410032453|ref|XP_003949372.1| PREDICTED: uncharacterized protein LOC456627 [Pan troglodytes]
gi|426328337|ref|XP_004024959.1| PREDICTED: serine/arginine-rich splicing factor 10 [Gorilla gorilla
gorilla]
gi|441676940|ref|XP_004092716.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|16265857|gb|AAL16665.1|AF419331_1 TLS-associated protein TASR-1 [Homo sapiens]
gi|2961107|gb|AAC70916.1| TLS-associated protein with SR repeats [Mus musculus]
gi|2961149|gb|AAC70918.1| TLS-associated protein TASR [Homo sapiens]
gi|7022446|dbj|BAA91601.1| unnamed protein product [Homo sapiens]
gi|12654547|gb|AAH01107.1| FUS interacting protein (serine/arginine-rich) 1 [Homo sapiens]
gi|15787482|gb|AAL06098.1| TLS-associated SR protein 1 [Homo sapiens]
gi|25006524|gb|AAN65381.1| splicing factor SRp38-2 [Homo sapiens]
gi|74178032|dbj|BAE29809.1| unnamed protein product [Mus musculus]
gi|74195900|dbj|BAE30509.1| unnamed protein product [Mus musculus]
gi|74214411|dbj|BAE40441.1| unnamed protein product [Mus musculus]
gi|261861046|dbj|BAI47045.1| splicing factor, arginine/serine-rich 13A [synthetic construct]
gi|312153330|gb|ADQ33177.1| FUS interacting protein (serine/arginine-rich) 1 [synthetic
construct]
gi|410223008|gb|JAA08723.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261894|gb|JAA18913.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302462|gb|JAA29831.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410330571|gb|JAA34232.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|417396659|gb|JAA45363.1| Putative serine/arginine-rich splicing factor [Desmodus rotundus]
Length = 183
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 9/107 (8%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS + R PP+ SL V N+ T ++DL F +YG +VD+++P D T RGFA
Sbjct: 1 MSRYLR--PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFA 54
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFA---KYGPNAERIKEG 104
+V+++ +A+ A+ LD + + GR+I +QFA + PN + KEG
Sbjct: 55 YVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEG 101
>gi|118151320|ref|NP_001071594.1| splicing factor, arginine/serine-rich 13A [Bos taurus]
gi|73586753|gb|AAI03101.1| FUS interacting protein (serine/arginine-rich) 1 [Bos taurus]
gi|296490040|tpg|DAA32153.1| TPA: FUS interacting protein (serine/arginine-rich) 1 [Bos taurus]
Length = 182
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 9/107 (8%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS + R PP+ SL V N+ T ++DL F +YG +VD+++P D T RGFA
Sbjct: 1 MSRYLR--PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFA 54
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFA---KYGPNAERIKEG 104
+V+++ +A+ A+ LD + + GR+I +QFA + PN + KEG
Sbjct: 55 YVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEG 101
>gi|125586354|gb|EAZ27018.1| hypothetical protein OsJ_10948 [Oryza sativa Japonica Group]
Length = 254
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 51/76 (67%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LLV NI+ +D+ F+++G V D+++PR+ T + RGF FV+++Y ++A A L
Sbjct: 63 LLVRNISLTARPEDIRIPFEQFGPVKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKQEL 122
Query: 78 DGRVVDGREITVQFAK 93
+ +V+ GREI++ FA+
Sbjct: 123 NHQVIGGREISIVFAE 138
>gi|300360549|ref|NP_001177936.1| serine/arginine-rich splicing factor 10 isoform 5 [Homo sapiens]
gi|291393216|ref|XP_002713069.1| PREDICTED: FUS interacting protein (serine-arginine rich) 1
[Oryctolagus cuniculus]
gi|410170859|ref|XP_003960062.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|74139434|dbj|BAE40858.1| unnamed protein product [Mus musculus]
Length = 182
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 9/107 (8%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS + R PP+ SL V N+ T ++DL F +YG +VD+++P D T RGFA
Sbjct: 1 MSRYLR--PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFA 54
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFA---KYGPNAERIKEG 104
+V+++ +A+ A+ LD + + GR+I +QFA + PN + KEG
Sbjct: 55 YVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEG 101
>gi|261327113|emb|CBH10089.1| RNA-binding protein, putative [Trypanosoma brucei gambiense DAL972]
Length = 601
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V NI ++L LF YG+++ + R+ TGDS G AFVR+ ++AQ A++
Sbjct: 131 NLFVSNIPHLLGKNELVDLFSPYGEILSAAVMRNIHTGDSLGTAFVRFATTEQAQAAMEA 190
Query: 77 LDGRVVDGREITVQFAK 93
L G V++GR + VQ+AK
Sbjct: 191 LTGYVLEGRSMVVQWAK 207
>gi|452820405|gb|EME27448.1| RNA-binding protein 8A isoform 1 [Galdieria sulphuraria]
Length = 156
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Query: 7 SGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKY 66
SGP + Y L+ N+ T +D++ F + G+V +I + DRRTG ++G+A + Y++
Sbjct: 53 SGPQKSVEGYILIACNLHEECTEEDIYDKFSELGEVKNIHLNLDRRTGFTKGYALIEYQH 112
Query: 67 ADEAQKAVDRLDGRVVDGREITVQFA-KYGPNAERI 101
EAQ A++ L+G + R + V +A GP R+
Sbjct: 113 FKEAQSAIEALNGAELHDRLLEVSWAFSRGPLGTRL 148
>gi|162455777|ref|YP_001618144.1| RNA-binding protein [Sorangium cellulosum So ce56]
gi|161166359|emb|CAN97664.1| RNA-binding protein [Sorangium cellulosum So ce56]
Length = 107
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N+++ T+ + L F G+V ++ +P DR TG RGFAFV A EA A+ +L
Sbjct: 5 LYVGNLSYNTSRESLEAAFAGSGEVREVAMPTDRETGQPRGFAFVTMGSAQEANSAISQL 64
Query: 78 DGRVVDGREITVQFAKYGP 96
+G ++DGR + V A+ P
Sbjct: 65 NGMMLDGRSLKVNEAQERP 83
>gi|432915990|ref|XP_004079241.1| PREDICTED: cold-inducible RNA-binding protein-like [Oryzias
latipes]
Length = 174
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
++D L + ++F T D L F KYG + + + RD+ TG SRGF FV+Y ++A+
Sbjct: 1 MSDEGKLFIGGLSFETNEDSLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNVEDAK 60
Query: 72 KAVDRLDGRVVDGREITV 89
A+D ++G+ +DGR I V
Sbjct: 61 DALDAMNGKTLDGRAIRV 78
>gi|359487440|ref|XP_002267230.2| PREDICTED: uncharacterized protein LOC100259677 [Vitis vinifera]
Length = 225
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 61/100 (61%), Gaps = 5/100 (5%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL F ++G + DI++PRD TG+ RGF FV+Y +A +A +
Sbjct: 37 SLLVRNLRHDCRPEDLRRPFGQFGPLKDIYLPRDYYTGEPRGFGFVQYVDPADAAEAKYQ 96
Query: 77 LDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDRSTGQ 116
+DG+V+ GRE+TV FA+ E K + +R+R+ G+
Sbjct: 97 MDGQVLLGRELTVVFAE-----ENRKRPVDMRARERTRGR 131
>gi|326510421|dbj|BAJ87427.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510771|dbj|BAJ91733.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 278
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 47/83 (56%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N+++ L LF + GKV+D + DR +G SRGF FV Y ADE A+ L
Sbjct: 194 LYVGNLSWGVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNL 253
Query: 78 DGRVVDGREITVQFAKYGPNAER 100
DG +DGR+I V A+ P +R
Sbjct: 254 DGVDLDGRQIRVTVAESKPREQR 276
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
+ ++ + V N+ F + L LF++ G V + + DR TG SRGF FV +E
Sbjct: 82 EYSEDLKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEV 141
Query: 71 QKAVDRLDGRVVDGREITVQ 90
AV++ +G GR + V
Sbjct: 142 AAAVEQFNGYTFQGRPLRVN 161
>gi|224139940|ref|XP_002323350.1| predicted protein [Populus trichocarpa]
gi|222867980|gb|EEF05111.1| predicted protein [Populus trichocarpa]
Length = 131
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 48/77 (62%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL F ++G + D+++PRD TG+ RGF FV+Y +A A
Sbjct: 39 SLLVRNLRLDCRPEDLRGPFGRFGPLKDVYLPRDYYTGEPRGFGFVQYLEPADAADAKHH 98
Query: 77 LDGRVVDGREITVQFAK 93
+DG ++ GRE+TV FA+
Sbjct: 99 MDGEILFGRELTVVFAE 115
>gi|403287344|ref|XP_003934909.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
Length = 173
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 9/107 (8%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS + R PP+ SL V N+ T ++DL F +YG +VD+++P D T RGFA
Sbjct: 1 MSRYLR--PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFA 54
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFA---KYGPNAERIKEG 104
+V+++ +A+ A+ LD + + GR+I +QFA + PN + KEG
Sbjct: 55 YVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEG 101
>gi|387913830|gb|AFK10524.1| cold inducible RNA binding protein isoform 3 [Callorhinchus
milii]
gi|392873312|gb|AFM85488.1| cold inducible RNA binding protein isoform 3 [Callorhinchus
milii]
gi|392873324|gb|AFM85494.1| cold inducible RNA binding protein isoform 3 [Callorhinchus
milii]
gi|392873420|gb|AFM85542.1| cold inducible RNA binding protein isoform 3 [Callorhinchus
milii]
gi|392873526|gb|AFM85595.1| cold inducible RNA binding protein isoform 3 [Callorhinchus
milii]
gi|392873598|gb|AFM85631.1| cold inducible RNA binding protein isoform 3 [Callorhinchus
milii]
gi|392877296|gb|AFM87480.1| cold inducible RNA binding protein isoform 3 [Callorhinchus
milii]
Length = 136
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 49/78 (62%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
+++ L V + F T L +F +YG+V ++ I RDR TG SRGF FV ++ D+AQ
Sbjct: 1 MSEERKLFVGGLNFNTEEQSLEEVFSEYGQVSEVRIIRDRDTGTSRGFGFVTFESPDDAQ 60
Query: 72 KAVDRLDGRVVDGREITV 89
A+ ++GR ++GR+I V
Sbjct: 61 DALTSMNGRSLEGRQIRV 78
>gi|15231285|ref|NP_187966.1| SC35-like splicing factor 30A [Arabidopsis thaliana]
gi|13878011|gb|AAK44083.1|AF370268_1 putative serine/arginine-rich protein [Arabidopsis thaliana]
gi|11994559|dbj|BAB02599.1| unnamed protein product [Arabidopsis thaliana]
gi|17104623|gb|AAL34200.1| putative serine/arginine-rich protein [Arabidopsis thaliana]
gi|332641854|gb|AEE75375.1| SC35-like splicing factor 30A [Arabidopsis thaliana]
Length = 262
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 51/77 (66%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL F+++G V DI++PRD TGD RGF F+++ +A +A +
Sbjct: 38 SLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQFMDPADAAEAKHQ 97
Query: 77 LDGRVVDGREITVQFAK 93
+DG ++ GRE+TV FA+
Sbjct: 98 MDGYLLLGRELTVVFAE 114
>gi|125543974|gb|EAY90113.1| hypothetical protein OsI_11679 [Oryza sativa Indica Group]
Length = 254
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 51/76 (67%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LLV NI+ +D+ F+++G V D+++PR+ T + RGF FV+++Y ++A A L
Sbjct: 63 LLVRNISLTARPEDIRIPFEQFGPVKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKQEL 122
Query: 78 DGRVVDGREITVQFAK 93
+ +V+ GREI++ FA+
Sbjct: 123 NHQVIGGREISIVFAE 138
>gi|300360545|ref|NP_001177935.1| serine/arginine-rich splicing factor 10 isoform 4 [Homo sapiens]
gi|332266731|ref|XP_003282351.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|397140012|ref|XP_003846473.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|426328341|ref|XP_004024961.1| PREDICTED: serine/arginine-rich splicing factor 10 [Gorilla gorilla
gorilla]
gi|14603220|gb|AAH10074.1| FUSIP1 protein [Homo sapiens]
Length = 173
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 9/107 (8%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS + R PP+ SL V N+ T ++DL F +YG +VD+++P D T RGFA
Sbjct: 1 MSRYLR--PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFA 54
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFA---KYGPNAERIKEG 104
+V+++ +A+ A+ LD + + GR+I +QFA + PN + KEG
Sbjct: 55 YVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEG 101
>gi|298492825|ref|YP_003723002.1| RNP-1 like RNA-binding protein ['Nostoc azollae' 0708]
gi|298234743|gb|ADI65879.1| RNP-1 like RNA-binding protein ['Nostoc azollae' 0708]
Length = 101
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 47/77 (61%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N++++ T DDL F +YGKV + +P DR TG RGFAFV + D+ A++
Sbjct: 2 SIYVGNLSYQVTEDDLKQAFAEYGKVSRVQLPTDRETGRLRGFAFVEMETEDQETAAIEA 61
Query: 77 LDGRVVDGREITVQFAK 93
LDG GR++ V AK
Sbjct: 62 LDGAEWMGRDLKVNKAK 78
>gi|226500552|ref|NP_001148723.1| ELAV-like protein 4 [Zea mays]
gi|195621654|gb|ACG32657.1| ELAV-like protein 4 [Zea mays]
Length = 127
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V + RTT++ L F K+G+V++ + DR +G SRGF FV+Y EA +A++
Sbjct: 35 NLFVSGLNKRTTSEGLKEAFSKFGQVIEARVITDRISGYSRGFGFVKYATVQEAGEAIEG 94
Query: 77 LDGRVVDGREITVQFAK 93
+DG+ +DG I ++AK
Sbjct: 95 MDGKFLDGWVIFAEYAK 111
>gi|374373120|ref|ZP_09630780.1| RNP-1 like RNA-binding protein [Niabella soli DSM 19437]
gi|373234093|gb|EHP53886.1| RNP-1 like RNA-binding protein [Niabella soli DSM 19437]
Length = 88
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/77 (42%), Positives = 43/77 (55%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V N+ F + DDL LF +G+V + DR TG SRGF FV +A A+
Sbjct: 2 NMYVSNLGFHASDDDLRELFSSFGQVSSAKVIMDRTTGKSRGFGFVEMGSVSDATLAMKE 61
Query: 77 LDGRVVDGREITVQFAK 93
LDG+ VDGR I V AK
Sbjct: 62 LDGKDVDGRRIAVSAAK 78
>gi|86606333|ref|YP_475096.1| RNA-binding protein [Synechococcus sp. JA-3-3Ab]
gi|86554875|gb|ABC99833.1| putative RNA-binding protein [Synechococcus sp. JA-3-3Ab]
Length = 96
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V N++F+ + +DL +F +YG V I +P DR TG RGFAFV + + QKA+D
Sbjct: 2 TIFVGNLSFKASEEDLRLVFSEYGTVKQIKLPVDRETGRKRGFAFVELENEADEQKAIDE 61
Query: 77 LDGRVVDGREITVQFA 92
LDG GR++ V A
Sbjct: 62 LDGATWMGRDLRVNKA 77
>gi|425434339|ref|ZP_18814808.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9432]
gi|425450077|ref|ZP_18829909.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 7941]
gi|440751641|ref|ZP_20930844.1| RNA recognition motif family protein [Microcystis aeruginosa
TAIHU98]
gi|389676192|emb|CCH94745.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9432]
gi|389769258|emb|CCI05857.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 7941]
gi|440176134|gb|ELP55407.1| RNA recognition motif family protein [Microcystis aeruginosa
TAIHU98]
Length = 97
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+ F DD+ +F +YGK+ + +P DR TG RGFAFV + +E KA+
Sbjct: 2 SIYVGNLPFEVDQDDVVEVFKEYGKIKRVHLPMDRETGKKRGFAFVEMETPEEETKAIAA 61
Query: 77 LDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDR 112
LDG GRE+ V A+ + G N +RDR
Sbjct: 62 LDGAQWMGRELKVNQAR--EREPKSSFGGGNRNRDR 95
>gi|357492235|ref|XP_003616406.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
gi|355517741|gb|AES99364.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
Length = 286
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 64/114 (56%), Gaps = 6/114 (5%)
Query: 13 TDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
++ SLLV NI ++L F+++G V D++IP+D +G RGFAFV++ A EA +
Sbjct: 44 SNNGSLLVRNIPLDCRPEELRAPFERFGPVRDVYIPKDYYSGQPRGFAFVQFVDAYEASE 103
Query: 73 AVDRLDGRVVDGREITVQFAKYGPNAE-RIKEGLLNHSRDRSTGQGVAVLGEDT 125
A +D ++ GREI+V A AE R + + H RS G G + G+ +
Sbjct: 104 AQYHMDRQIFAGREISVVVA-----AETRKRPEEMRHRTSRSRGPGGSYGGQRS 152
>gi|409993905|ref|ZP_11277031.1| RNA-binding region RNP-1 [Arthrospira platensis str. Paraca]
gi|291569285|dbj|BAI91557.1| RNA-binding protein [Arthrospira platensis NIES-39]
gi|409935253|gb|EKN76791.1| RNA-binding region RNP-1 [Arthrospira platensis str. Paraca]
Length = 103
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 44/77 (57%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+++ T DDL +F +YG V + +P DR TG RGF FV E Q A+D
Sbjct: 2 SIYVGNLSYEVTEDDLTAVFAEYGSVKRVKLPTDRETGRMRGFGFVEMDTEAEEQSAIDA 61
Query: 77 LDGRVVDGREITVQFAK 93
LDG GR++ V AK
Sbjct: 62 LDGAEWCGRDLRVNKAK 78
>gi|296476640|tpg|DAA18755.1| TPA: FUS interacting protein (serine-arginine rich) 1-like [Bos
taurus]
Length = 262
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 9/107 (8%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS + R PP+ SL V N+ T ++DL F +YG +VD+++P D T RGFA
Sbjct: 1 MSRYLR--PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFA 54
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFA---KYGPNAERIKEG 104
+V+++ +A+ A+ LD + + GR+I +QFA + PN + KEG
Sbjct: 55 YVQFEDVRDAEDALHNLDRKCICGRQIEIQFAQGDRKTPNQMKAKEG 101
>gi|196232841|ref|ZP_03131691.1| RNP-1 like RNA-binding protein [Chthoniobacter flavus Ellin428]
gi|196223040|gb|EDY17560.1| RNP-1 like RNA-binding protein [Chthoniobacter flavus Ellin428]
Length = 107
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 54/100 (54%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N++F TT DL F + G V + + +D+ TG SRGF FV ++EAQKA+D
Sbjct: 5 LYVGNLSFDTTEMDLQDTFAEAGTVSEATLMQDKFTGKSRGFGFVTMSSSEEAQKAIDLF 64
Query: 78 DGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDRSTGQG 117
G+ V GR +TV A+ G + +RS GQG
Sbjct: 65 HGKTVQGRALTVNEARPREERGGGGGGSRSFGGNRSGGQG 104
>gi|168054234|ref|XP_001779537.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669018|gb|EDQ55613.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 194
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 46/85 (54%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
+ +T + + N+++ AD L +F +YG VVD + DR TG SRGF FV A E
Sbjct: 110 LDNTNKMFIGNLSWSCDADALVQVFSEYGSVVDAKVVYDRDTGKSRGFGFVTMSAASEVS 169
Query: 72 KAVDRLDGRVVDGREITVQFAKYGP 96
AV LDG +GRE+ V A P
Sbjct: 170 NAVQNLDGAEFEGREMRVSEAGERP 194
Score = 40.4 bits (93), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N+ + + L + V + + D+++G SRGFAFV + AQ +DRL
Sbjct: 2 LYVGNLPWTCDSAQLAEICGDISSVEAVDVVYDQQSGRSRGFAFVTMSTNEGAQSVIDRL 61
Query: 78 DGRVVDGREITVQF 91
DG GR + V F
Sbjct: 62 DGSDFGGRPLKVSF 75
>gi|71043780|ref|NP_001020909.1| serine/arginine-rich splicing factor 10 [Rattus norvegicus]
gi|68533686|gb|AAH98831.1| FUS interacting protein (serine-arginine rich) 1 [Rattus
norvegicus]
Length = 164
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 9/107 (8%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS + R PP+ SL V N+ T ++DL F +YG +VD+++P D T RGFA
Sbjct: 1 MSRYLR--PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFA 54
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFA---KYGPNAERIKEG 104
+V+++ +A+ A+ LD + + GR+I +QFA + PN + KEG
Sbjct: 55 YVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEG 101
>gi|359318925|ref|XP_003638944.1| PREDICTED: serine/arginine-rich splicing factor 10 [Canis lupus
familiaris]
Length = 173
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 9/107 (8%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS + R PP+ SL V N+ T ++DL F +YG +VD+++P D T RGFA
Sbjct: 1 MSRYLR--PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFA 54
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFA---KYGPNAERIKEG 104
+V+++ +A+ A+ LD + + GR+I +QFA + PN + KEG
Sbjct: 55 YVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEG 101
>gi|224112763|ref|XP_002316285.1| predicted protein [Populus trichocarpa]
gi|222865325|gb|EEF02456.1| predicted protein [Populus trichocarpa]
Length = 232
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%)
Query: 13 TDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
++ SLLV NI D+L F+++G V D++IP+D TG+ RGFAFV++ EA +
Sbjct: 3 QNSGSLLVRNIPLDCRPDELRGPFERFGVVRDVYIPKDYYTGEPRGFAFVQFVDPYEAME 62
Query: 73 AVDRLDGRVVDGREITV 89
A R++G++ GR+I+V
Sbjct: 63 AQHRMNGQIFAGRQISV 79
>gi|58269650|ref|XP_571981.1| glycine-rich RNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|134113905|ref|XP_774200.1| hypothetical protein CNBG1820 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256835|gb|EAL19553.1| hypothetical protein CNBG1820 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228217|gb|AAW44674.1| glycine-rich RNA binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 161
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ V N+++ +T D L +F YG V D + +DR TG SRGF FV Y EA+ A+ +
Sbjct: 6 VYVGNLSWNSTDDTLLQVFSAYGTVTDCIVMKDRETGRSRGFGFVTYGSPQEAEAAIAAM 65
Query: 78 DGRVVDGREITVQFAK 93
+ + +DGR + V A
Sbjct: 66 NEQELDGRRVRVNMAN 81
>gi|428308134|ref|YP_007144959.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
gi|428249669|gb|AFZ15449.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
Length = 113
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 46/77 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+++ T DDL +F +YG V + +P DR TG RGFAFV + D+ A++
Sbjct: 2 SIYVGNLSYEVTEDDLNSVFAEYGTVKRVNLPNDRETGRPRGFAFVEMQTEDQENAAIEA 61
Query: 77 LDGRVVDGREITVQFAK 93
LDG GR++ V AK
Sbjct: 62 LDGAEWMGRDLKVNKAK 78
>gi|74141008|dbj|BAE22085.1| unnamed protein product [Mus musculus]
Length = 278
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 9/107 (8%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS + R PP+ SL V N+ T ++DL F +YG +VD+++P D T RGFA
Sbjct: 1 MSRYLR--PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFA 54
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFA---KYGPNAERIKEG 104
+V+++ +A+ A+ LD + + GR+I +QFA + PN + KEG
Sbjct: 55 YVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEG 101
>gi|344287390|ref|XP_003415436.1| PREDICTED: serine/arginine-rich splicing factor 10-like isoform 2
[Loxodonta africana]
Length = 173
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 9/107 (8%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS + R PP+ SL V N+ T ++DL F +YG +VD+++P D T RGFA
Sbjct: 1 MSRYLR--PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFA 54
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFA---KYGPNAERIKEG 104
+V+++ +A+ A+ LD + + GR+I +QFA + PN + KEG
Sbjct: 55 YVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEG 101
>gi|168054274|ref|XP_001779557.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669038|gb|EDQ55633.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 213
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 45/83 (54%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D L V NI + + LF YG VVD I DR +G SRGF FV + +AQ A
Sbjct: 125 DPNKLFVGNIPWGCDEAAMTSLFSPYGSVVDAKIVYDRDSGRSRGFGFVTMEKVGDAQTA 184
Query: 74 VDRLDGRVVDGREITVQFAKYGP 96
++ LDG +DGRE+ V FA P
Sbjct: 185 MENLDGTELDGRELRVNFAGEKP 207
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ V N+ + + L + ++G V + + D+ +G SRGFAFV D+AQ ++ L
Sbjct: 25 VYVGNLPWTCDSAQLAEICSQHGTVDVVEVIYDKLSGRSRGFAFVTMASHDDAQALINAL 84
Query: 78 DGRVVDGREITVQFAKYGPNAERIKE 103
DG + GR + V F + + R ++
Sbjct: 85 DGSDMGGRALKVNFPQSQKDKPRFEK 110
>gi|123471459|ref|XP_001318929.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121901700|gb|EAY06706.1| hypothetical protein TVAG_211580 [Trichomonas vaginalis G3]
Length = 220
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ + N+ F T L +F KYG+V+D IP + G SRG+ FV + ++AQKAVD
Sbjct: 30 SVHIGNLPFEYTEAKLKEIFGKYGEVLDSKIPTNP-AGRSRGYGFVSFALKEDAQKAVDE 88
Query: 77 LDGRVVDGREITVQFAK 93
L+ + ++GR++ V FAK
Sbjct: 89 LNNKEMEGRKVEVAFAK 105
>gi|119486604|ref|ZP_01620654.1| RNA-binding region [Lyngbya sp. PCC 8106]
gi|119456221|gb|EAW37353.1| RNA-binding region [Lyngbya sp. PCC 8106]
Length = 100
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 43/77 (55%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ + N+ + T DDL +F YG V + IP DR TG SRGFAFV E A++
Sbjct: 2 SVYIGNLAYEVTEDDLKSVFTDYGSVKRVHIPTDRETGRSRGFAFVEMDTDSEETSAIEE 61
Query: 77 LDGRVVDGREITVQFAK 93
LDG GR++ V AK
Sbjct: 62 LDGAEWMGRDLKVNKAK 78
>gi|296207043|ref|XP_002750472.1| PREDICTED: serine/arginine-rich splicing factor 10 isoform 2
[Callithrix jacchus]
Length = 262
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 9/107 (8%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS + R PP+ SL V N+ T ++DL F +YG +VD+++P D T RGFA
Sbjct: 1 MSRYLR--PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFA 54
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFA---KYGPNAERIKEG 104
+V+++ +A+ A+ LD + + GR+I +QFA + PN + KEG
Sbjct: 55 YVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEG 101
>gi|281354031|gb|EFB29615.1| hypothetical protein PANDA_003724 [Ailuropoda melanoleuca]
Length = 249
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + D+ I D+++ SRGFAFV
Sbjct: 144 HVGNRANPDPN--CCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFV 201
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D+A++A +R +G +DGR I V F+
Sbjct: 202 YFENVDDAKEAKERANGMELDGRRIRVDFS 231
>gi|422304104|ref|ZP_16391453.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9806]
gi|389790787|emb|CCI13324.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9806]
Length = 97
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 45/77 (58%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+ F DD+ +F +YGK+ + +P DR TG RGFAFV + +E KA+
Sbjct: 2 SIYVGNLPFEVDQDDVVEVFKEYGKIKRVHLPMDRETGKKRGFAFVEMETPEEEAKAIAA 61
Query: 77 LDGRVVDGREITVQFAK 93
LDG GRE+ V A+
Sbjct: 62 LDGAQWMGRELKVNQAR 78
>gi|242035637|ref|XP_002465213.1| hypothetical protein SORBIDRAFT_01g034200 [Sorghum bicolor]
gi|241919067|gb|EER92211.1| hypothetical protein SORBIDRAFT_01g034200 [Sorghum bicolor]
gi|448878340|gb|AGE46133.1| arginine/serine-rich splicing factor SCL25A transcript I [Sorghum
bicolor]
gi|448878342|gb|AGE46134.1| arginine/serine-rich splicing factor SCL25A transcript II [Sorghum
bicolor]
Length = 213
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 58/97 (59%), Gaps = 3/97 (3%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ DDL F K+G+V DI++P+D T + +GF F++Y ++A A
Sbjct: 38 SLLVRNLRRDCRPDDLRRPFGKFGRVKDIYLPKDYYTREPKGFGFIQYFDPEDASDAKYH 97
Query: 77 LDGRVVDGREITVQFA---KYGPNAERIKEGLLNHSR 110
+DG+++ GREITV FA + P+ R +E + SR
Sbjct: 98 MDGQMLLGREITVVFAEENRKKPSDMRARERMSGRSR 134
>gi|410170856|ref|XP_003960061.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|426328339|ref|XP_004024960.1| PREDICTED: serine/arginine-rich splicing factor 10 [Gorilla gorilla
gorilla]
Length = 217
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 9/107 (8%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS + R PP+ SL V N+ T ++DL F +YG +VD+++P D T RGFA
Sbjct: 1 MSRYLR--PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFA 54
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFA---KYGPNAERIKEG 104
+V+++ +A+ A+ LD + + GR+I +QFA + PN + KEG
Sbjct: 55 YVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEG 101
>gi|388579351|gb|EIM19676.1| translation initiation factor 3, RNA-binding subunit [Wallemia sebi
CBS 633.66]
Length = 288
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 55/86 (63%)
Query: 8 GPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYA 67
G P + +L V N++ T DDL LF ++G+V +FI RDR T S+GFAFV ++
Sbjct: 199 GGPSRDEYPTLRVTNVSEDTHEDDLRELFRRFGRVQRVFIGRDRETRASKGFAFVSFELR 258
Query: 68 DEAQKAVDRLDGRVVDGREITVQFAK 93
+A+KA+++++G D ++VQ+++
Sbjct: 259 SDAEKALEKVNGMGYDNLILSVQWSQ 284
>gi|392578419|gb|EIW71547.1| hypothetical protein TREMEDRAFT_56482 [Tremella mesenterica DSM
1558]
Length = 223
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 50/79 (63%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ V N+++ TT D L F ++G+V+D + +DR TG SRGF FV + A+EA+ ++ ++
Sbjct: 6 VYVGNLSWNTTDDTLRDAFMQFGQVLDSIVMKDRETGRSRGFGFVTFSTAEEAEISIQQM 65
Query: 78 DGRVVDGREITVQFAKYGP 96
+ + +DGR I V A P
Sbjct: 66 NEQPLDGRNIRVNMANAKP 84
>gi|115453135|ref|NP_001050168.1| Os03g0363800 [Oryza sativa Japonica Group]
gi|108708312|gb|ABF96107.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113548639|dbj|BAF12082.1| Os03g0363800 [Oryza sativa Japonica Group]
gi|215737124|dbj|BAG96053.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 243
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 51/76 (67%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LLV NI+ +D+ F+++G V D+++PR+ T + RGF FV+++Y ++A A L
Sbjct: 63 LLVRNISLTARPEDIRIPFEQFGPVKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKQEL 122
Query: 78 DGRVVDGREITVQFAK 93
+ +V+ GREI++ FA+
Sbjct: 123 NHQVIGGREISIVFAE 138
>gi|148228969|ref|NP_001088073.1| RNA binding motif protein 19 [Xenopus laevis]
gi|52354760|gb|AAH82875.1| LOC494769 protein [Xenopus laevis]
Length = 920
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
D++++ L V N+ + T DDL LF KYG + +I P D T +GFAFV + + A
Sbjct: 381 DLSESGRLFVRNLPYSCTEDDLDKLFSKYGPISEIHFPIDSLTKKPKGFAFVTFLITEHA 440
Query: 71 QKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDRSTG 115
KA +DG++ GR + V P+A + +E +N S ++G
Sbjct: 441 VKAYAEVDGQIFQGRLLHVL-----PSAAKKEE--VNESEGDASG 478
Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDR-RTGD--SRGFAFVRYKYADEAQKA 73
+L + N+ F T+ + L +F K G V I + + ++G S GF FV Y ++AQKA
Sbjct: 696 TLFIKNLNFSTSEETLKEVFSKVGTVKSCSISKKKDKSGSLLSMGFGFVEYMKPEQAQKA 755
Query: 74 VDRLDGRVVDGREITVQFAK 93
+ RL +VDG ++ ++ ++
Sbjct: 756 LRRLQQCMVDGHQVEIKLSE 775
Score = 42.0 bits (97), Expect = 0.29, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRR-TGDSRGFAFVRYKYADEAQKAVDR 76
+LV N+ F+ T ++ LF +G++ + +P+ TG RGF FV + +A++A
Sbjct: 799 ILVRNVPFQATVREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDFVTKQDAKRAFSA 858
Query: 77 L-DGRVVDGREITVQFAKYGPNAERIKEGLLNH 108
L + GR + +++A+ + E ++ H
Sbjct: 859 LCHSTHLYGRRLVLEWAETEDSVETLRRKTAEH 891
>gi|117619969|ref|YP_856326.1| RNA-binding protein [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
gi|117561376|gb|ABK38324.1| RNA-binding protein [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
Length = 95
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 4/89 (4%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKV--VDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
D + V N+++R TAD+L +F ++G+V VDI I RD TG S+GF F+ EA+
Sbjct: 2 DGMKIYVGNLSYRMTADELTTVFSQFGQVDKVDIIIDRD--TGQSKGFGFIEMPVNGEAE 59
Query: 72 KAVDRLDGRVVDGREITVQFAKYGPNAER 100
KA+ L G + GR ITV AK +A R
Sbjct: 60 KAIAGLHGTEIGGRTITVNQAKPKTDAPR 88
>gi|403413086|emb|CCL99786.1| predicted protein [Fibroporia radiculosa]
Length = 290
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 50/80 (62%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D +L V NI+ T +DL LF +G+V +++ RDR TG +GFAFV ++ AQ+A
Sbjct: 206 DLPTLRVTNISEDTQENDLRDLFGAFGRVARVYVGRDRETGAGKGFAFVSFEDRGVAQRA 265
Query: 74 VDRLDGRVVDGREITVQFAK 93
+D+L GR D + +Q+++
Sbjct: 266 MDKLHGRGYDNLILNIQWSQ 285
>gi|170585176|ref|XP_001897362.1| RNA recognition motif domain containing protein [Brugia malayi]
gi|158595237|gb|EDP33806.1| RNA recognition motif domain containing protein [Brugia malayi]
Length = 340
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 54/89 (60%)
Query: 5 GRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRY 64
GR G + +L V + + DDL LF++ G V D++IP D T +SRGFA+V++
Sbjct: 3 GRRGSYRDDEIPTLYVRQVHYSARPDDLRALFEQMGPVRDVYIPLDYYTRESRGFAYVKF 62
Query: 65 KYADEAQKAVDRLDGRVVDGREITVQFAK 93
++ +A+ A+ L+G + GR I V++A+
Sbjct: 63 EFTRDAEDALRELNGTSILGRRIEVEWAE 91
>gi|358253472|dbj|GAA53142.1| serine/arginine-rich splicing factor 10 [Clonorchis sinensis]
Length = 346
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 52/83 (62%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L + N+ T +D++ F K+G+VV++ IP D T ++G+AFV Y D+A +A++ +
Sbjct: 42 LHIRNLPDSITYNDVWLEFKKFGEVVNVTIPMDVNTAKAKGYAFVEYADCDDAARALNEM 101
Query: 78 DGRVVDGREITVQFAKYGPNAER 100
G ++ GR +TVQ+++ P R
Sbjct: 102 HGILLWGRILTVQYSRSYPKTSR 124
>gi|129562659|gb|ABO31095.1| tsunagi [Schistosoma japonicum]
Length = 176
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 6 RSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYK 65
+SGP + + L V N+ T +D+ F +YG + +I + DRRTG +G+A V Y+
Sbjct: 60 KSGPQRSVEGWILFVRNVQEEATEEDIRDKFCEYGDIKNIHLNLDRRTGYLKGYALVEYE 119
Query: 66 YADEAQKAVDRLDGRVVDGREITVQFA-KYGPN 97
EA A+++L+G ++G+ I V +A GPN
Sbjct: 120 NFKEAHTAMEQLNGSELNGQRIHVDWAFTKGPN 152
>gi|22902265|gb|AAH37591.1| FUS interacting protein (serine-arginine rich) 1 [Mus musculus]
Length = 261
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 9/107 (8%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS + R PP+ SL V N+ T ++DL F +YG +VD+++P D T RGFA
Sbjct: 1 MSRYLR--PPNT----SLFVRNVADDTQSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFA 54
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFA---KYGPNAERIKEG 104
+V+++ +A+ A+ LD + + GR+I +QFA + PN + KEG
Sbjct: 55 YVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEG 101
>gi|304376936|gb|ACI70007.2| Cold-inducible RNA-binding protein [Salmo salar]
Length = 82
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
++D L V ++F TT + L F KYG + + + RD+ TG SRGF FV+Y A++A+
Sbjct: 1 MSDEGKLFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAK 60
Query: 72 KAVDRLDGRVVD 83
A+D ++G+ VD
Sbjct: 61 DALDGMNGKSVD 72
>gi|410910852|ref|XP_003968904.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Takifugu
rubripes]
Length = 238
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 58/98 (59%), Gaps = 7/98 (7%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V NI+ + +DL F +YG +VD++IP D T RGFA+++++
Sbjct: 7 PPNT----SLFVRNISDESRPEDLRREFGRYGPIVDVYIPLDFYTRQPRGFAYIQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFA---KYGPNAERIKE 103
+A+ A+ LD + V GR+I +QFA + PN + KE
Sbjct: 63 DAEDALHSLDRKWVCGRQIEIQFAQGDRKTPNQMKSKE 100
>gi|301120270|ref|XP_002907862.1| eukaryotic translation initiation factor 3 subunit G, putative
[Phytophthora infestans T30-4]
gi|262102893|gb|EEY60945.1| eukaryotic translation initiation factor 3 subunit G, putative
[Phytophthora infestans T30-4]
Length = 325
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D+ +L V N++ T DDL LF +G V +++ +DR T SRGFAFV + Y ++A+KA
Sbjct: 211 DSATLRVTNVSPDTREDDLKELFRAFGPVARVYLAKDRETFQSRGFAFVSFMYREDAEKA 270
Query: 74 VDRLDGRVVDGREITVQFAK 93
+++L G D + +++AK
Sbjct: 271 LNKLQGYGYDHLILKLEWAK 290
>gi|71897267|ref|NP_001026077.1| splicing factor, arginine/serine-rich 13A [Gallus gallus]
gi|53126728|emb|CAG30979.1| hypothetical protein RCJMB04_1g4 [Gallus gallus]
Length = 262
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 9/107 (8%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS + R PP+ SL V N+ T ++DL F +YG +VD+++P D T RGFA
Sbjct: 1 MSRYLR--PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFA 54
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFA---KYGPNAERIKEG 104
+V+++ +A+ A+ LD + + GR+I +QFA + PN + KEG
Sbjct: 55 YVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEG 101
>gi|397576490|gb|EJK50286.1| hypothetical protein THAOC_30767 [Thalassiosira oceanica]
Length = 397
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N+++ T L LF +YG V+D +IP DR TG RGFAFV D+A +A D
Sbjct: 287 LYVGNLSWGTEEGALRELFGEYGSVIDCYIPTDRETGQHRGFAFVTMG-PDDALRAADET 345
Query: 78 DGRVVDGREITVQFAKYGPNAERIKEGLLN 107
DG +DGR + V A+ P +R N
Sbjct: 346 DGYELDGRILRVNEAQ--PKGQRNNYNSYN 373
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ V N+ F TTA+DL F+++G V+D F+P D G++RGF F++ D + KA++ +
Sbjct: 198 IYVGNLNFDTTAEDLKAAFEEFGDVMDCFLPVD-YDGNARGFGFIQMSDED-SLKAIEGM 255
Query: 78 DGRVVDGREITVQ 90
+G DGR + V
Sbjct: 256 NGVEFDGRTLNVN 268
>gi|195546808|ref|NP_001091837.2| Elav protein [Bombyx mori]
gi|195542256|gb|ABM21482.2| ELAV [Bombyx mori]
Length = 301
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 50/91 (54%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
++H G + +T+S+ + NI L+ LF YG +V + I RD +T S+G+
Sbjct: 206 INHISAVGEHNSPNTWSIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYG 265
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQF 91
FV + D+A A+ L+G ++ G+ ++V F
Sbjct: 266 FVTMRNYDQAAMAIQALNGYLLHGQPLSVSF 296
>gi|428673153|gb|EKX74066.1| serine/arginine rich splicing factor, putative [Babesia equi]
Length = 183
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 50/79 (63%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ + T+ D + LF +YG++ D+++P D T RGF FV + ++A +A+
Sbjct: 14 SLLVKNLKYETSPDKVRSLFSRYGEIRDVYLPLDYYTKKPRGFGFVEFYKEEDADEALRG 73
Query: 77 LDGRVVDGREITVQFAKYG 95
+DG +DG ++ V AK+G
Sbjct: 74 MDGEEIDGNKVEVFPAKHG 92
>gi|327285770|ref|XP_003227605.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 10-like [Anolis carolinensis]
Length = 262
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 9/107 (8%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS + R PP+ SL V N+ T ++DL F +YG +VD+++P D T RGFA
Sbjct: 1 MSRYLR--PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFA 54
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFA---KYGPNAERIKEG 104
+V+++ +A+ A LD + + GR+I +QFA + PN + KEG
Sbjct: 55 YVQFEDVRDAEDAFHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEG 101
>gi|186685885|ref|YP_001869081.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
gi|186468337|gb|ACC84138.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
Length = 109
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 45/77 (58%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+++ T D L +F +YG V + +P DR TG RGFAFV DE KA++
Sbjct: 2 SIYVGNLSYEVTQDALSTVFAEYGSVKRVQLPTDRETGRLRGFAFVEMSSEDEETKAIES 61
Query: 77 LDGRVVDGREITVQFAK 93
LDG GR++ V AK
Sbjct: 62 LDGAEWMGRDLKVNKAK 78
>gi|383767221|ref|YP_005446202.1| RNA-binding protein [Phycisphaera mikurensis NBRC 102666]
gi|381387489|dbj|BAM04305.1| RNA-binding protein [Phycisphaera mikurensis NBRC 102666]
Length = 112
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ V N+ +RTT +DL LF YG V D + DR TG SRGF FV D A+KA+D L
Sbjct: 3 MYVGNLAWRTTTEDLEALFSNYGSVSDAIVLTDRETGRSRGFGFVTMGDED-AKKAIDAL 61
Query: 78 DGRVVDGREITVQFAK 93
DG +GR + V A+
Sbjct: 62 DGSDFEGRPLRVNEAQ 77
>gi|4001720|dbj|BAA35092.1| neural specific sr protein NSSR 1 [Mus musculus]
Length = 262
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 9/107 (8%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS + R PP+ SL V N+ T ++DL F +YG +VD+++P D T RGFA
Sbjct: 1 MSRYLR--PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFA 54
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFA---KYGPNAERIKEG 104
+V+++ +A+ A+ LD + + GR+I +QFA + PN + KEG
Sbjct: 55 YVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEG 101
>gi|449477354|ref|XP_002196178.2| PREDICTED: probable RNA-binding protein 19 [Taeniopygia guttata]
Length = 944
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 45/74 (60%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
++++ L V N+ F +T +DL +F KYG + +I P D+ T +GFAF+ Y + A
Sbjct: 399 LSESGRLFVRNLPFTSTEEDLEKIFSKYGPLSEIHFPIDKLTKKPKGFAFITYMIPEHAV 458
Query: 72 KAVDRLDGRVVDGR 85
KA+ LDG+V GR
Sbjct: 459 KALAELDGQVFQGR 472
Score = 50.4 bits (119), Expect = 9e-04, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGD---SRGFAFVRYKYADEAQKA 73
+L + N+ F TT D L F K G + I + + S GF FV YK + AQKA
Sbjct: 717 TLFIKNLNFATTEDTLKETFSKVGALKSCTISKKKDKAGTLLSMGFGFVEYKKPESAQKA 776
Query: 74 VDRLDGRVVDGREITVQFAK 93
+ +L G VDG ++ V+ ++
Sbjct: 777 LRQLQGCTVDGHKLEVKLSE 796
Score = 44.3 bits (103), Expect = 0.049, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Query: 15 TYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRR-TGDSRGFAFVRYKYADEAQKA 73
T +LV NI F+ T ++ LF +G++ + +P+ TG RGF FV + +A+KA
Sbjct: 817 TSKILVRNIPFQATVREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDFVTKQDAKKA 876
Query: 74 VDRL-DGRVVDGREITVQFAKYGPNAERIKEGLLNHSRD 111
L + GR + +++A E ++ H D
Sbjct: 877 FQALCHSTHLYGRRLVLEWADTEETLEALRRKTAQHFHD 915
Score = 38.9 bits (89), Expect = 2.2, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L+V N+ + LF +G + D + + + G R F F+ YK DEAQ A++
Sbjct: 4 LIVKNLPSGMKEERFRKLFAAFGTLTDCCL-KYTKDGRFRKFGFIGYKSEDEAQAALNHF 62
Query: 78 DGRVVDGREITVQFAK 93
+ +D +TV+ K
Sbjct: 63 NKSFIDTSRLTVELCK 78
>gi|108708313|gb|ABF96108.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 238
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 51/76 (67%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LLV NI+ +D+ F+++G V D+++PR+ T + RGF FV+++Y ++A A L
Sbjct: 63 LLVRNISLTARPEDIRIPFEQFGPVKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKQEL 122
Query: 78 DGRVVDGREITVQFAK 93
+ +V+ GREI++ FA+
Sbjct: 123 NHQVIGGREISIVFAE 138
>gi|427706332|ref|YP_007048709.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
gi|427358837|gb|AFY41559.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
Length = 110
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N++++ T +DL F +YGKV + +P DR TG RGFAFV + + A++
Sbjct: 2 SIYVGNLSYQVTEEDLKMAFSEYGKVSRVQLPTDRETGRPRGFAFVEMETESQETAAIEA 61
Query: 77 LDGRVVDGREITVQFAKYGPNAER 100
LDG GR++ V AK P ER
Sbjct: 62 LDGAEWMGRDLKVNKAK--PREER 83
>gi|406988412|gb|EKE08420.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 123
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N+ F + D + LF YG+V ++ I DR +G SRGFAFVR ADEA KA D L
Sbjct: 8 LYVGNLNFDASEDQVRELFGSYGEVQEVKIIMDRFSGRSRGFAFVRMATADEAGKAKDAL 67
Query: 78 DGRVVDGREITVQFAK 93
G+ G+ + + +A+
Sbjct: 68 SGQPFQGKSLVIDWAR 83
>gi|115441831|ref|NP_001045195.1| Os01g0916600 [Oryza sativa Japonica Group]
gi|2624328|emb|CAA05729.1| OsGRP2 [Oryza sativa Japonica Group]
gi|19386753|dbj|BAB86134.1| OsGRP2 [Oryza sativa Japonica Group]
gi|20805007|dbj|BAB92683.1| OsGRP2 [Oryza sativa Japonica Group]
gi|113534726|dbj|BAF07109.1| Os01g0916600 [Oryza sativa Japonica Group]
gi|125528847|gb|EAY76961.1| hypothetical protein OsI_04919 [Oryza sativa Indica Group]
gi|125573102|gb|EAZ14617.1| hypothetical protein OsJ_04542 [Oryza sativa Japonica Group]
gi|215765299|dbj|BAG86996.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768370|dbj|BAH00599.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 150
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V +++ T D L F +G V + + DR +G SRGF FV + D+A+ A+D +
Sbjct: 39 LFVGGLSWNTNDDSLKEAFTSFGDVTEARVINDRESGRSRGFGFVSFANGDDAKSAMDAM 98
Query: 78 DGRVVDGREITVQFAKYGP 96
DG+ ++GR I V FA P
Sbjct: 99 DGKELEGRSIRVNFANERP 117
>gi|356511826|ref|XP_003524623.1| PREDICTED: uncharacterized protein LOC100782808 [Glycine max]
Length = 274
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 44/79 (55%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L + +++ T L F KYG+VVD I DR TG SRGF F+ Y +EA A+ L
Sbjct: 44 LFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSAIQAL 103
Query: 78 DGRVVDGREITVQFAKYGP 96
DG+ + GR I V +A P
Sbjct: 104 DGQDLHGRPIRVNYANERP 122
>gi|359318927|ref|XP_003638945.1| PREDICTED: serine/arginine-rich splicing factor 10 [Canis lupus
familiaris]
Length = 262
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 9/107 (8%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS + R PP+ SL V N+ T ++DL F +YG +VD+++P D T RGFA
Sbjct: 1 MSRYLR--PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFA 54
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFA---KYGPNAERIKEG 104
+V+++ +A+ A+ LD + + GR+I +QFA + PN + KEG
Sbjct: 55 YVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEG 101
>gi|291399268|ref|XP_002716024.1| PREDICTED: FUS interacting protein (serine-arginine rich) 1
[Oryctolagus cuniculus]
Length = 182
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL V N+ T ++DL F +YG +VD+++P D T RGFA+V+++ +A+ A+
Sbjct: 11 SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHN 70
Query: 77 LDGRVVDGREITVQFA---KYGPNAERIKEG 104
LD + + GR+I +QFA + PN + KEG
Sbjct: 71 LDRKWICGRQIEIQFAQGDRKTPNQMKAKEG 101
>gi|170078237|ref|YP_001734875.1| RNA-binding protein [Synechococcus sp. PCC 7002]
gi|169885906|gb|ACA99619.1| RNA-binding protein [Synechococcus sp. PCC 7002]
Length = 95
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 46/77 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ + N++++ T +DL F +YGKV + +P DR TG RGFAFV DE A++
Sbjct: 2 SIYIGNLSYQVTDEDLKETFAEYGKVNRVQVPTDRETGRPRGFAFVEMSSEDEENAAIEA 61
Query: 77 LDGRVVDGREITVQFAK 93
LDG GR++ V AK
Sbjct: 62 LDGAEWMGRDLKVNKAK 78
>gi|168029395|ref|XP_001767211.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681466|gb|EDQ67892.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 192
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 46/91 (50%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
P D + V N+++ L LF YGKVVD + DR +G SRGF FV Y
Sbjct: 100 PAARDDPNKVFVGNLSWGVDNGALQELFSDYGKVVDARVVYDRESGRSRGFGFVTYSDVS 159
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYGPNAE 99
E A+D LDG DGRE+ V A P ++
Sbjct: 160 EVDAAIDSLDGAEFDGRELRVNLAGNKPASK 190
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L + N+ ++ + L + ++G V + + D+ +G SRGFAFV ++A+ ++RL
Sbjct: 2 LYIGNLPWQCDSAQLAGICQEFGSVELVEVIYDQESGRSRGFAFVTMATQEDAENVIERL 61
Query: 78 DGRVVDGREITVQFAKYGPN 97
DG V GR + V F + N
Sbjct: 62 DGHDVGGRPLKVSFPQSKQN 81
>gi|126328572|ref|XP_001362618.1| PREDICTED: serine/arginine-rich splicing factor 10-like
[Monodelphis domestica]
Length = 262
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 9/107 (8%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS + R PP+ SL V N+ T ++DL F +YG +VD+++P D T RGFA
Sbjct: 1 MSRYLR--PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFA 54
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFA---KYGPNAERIKEG 104
+V+++ +A+ A+ LD + + GR+I +QFA + PN + KEG
Sbjct: 55 YVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEG 101
>gi|321260943|ref|XP_003195191.1| glycine-rich RNA binding protein [Cryptococcus gattii WM276]
gi|317461664|gb|ADV23404.1| Glycine-rich RNA binding protein, putative [Cryptococcus gattii
WM276]
Length = 177
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ V N+++ +T D L +F YG V D + +DR TG SRGF FV Y EA+ A+ +
Sbjct: 6 VYVGNLSWNSTDDTLLQVFSAYGTVTDCIVMKDRETGRSRGFGFVTYGSPQEAEAAIAAM 65
Query: 78 DGRVVDGREITVQFAK 93
+ + +DGR + V A
Sbjct: 66 NEQELDGRRVRVNMAN 81
>gi|86608641|ref|YP_477403.1| RNA-binding protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557183|gb|ABD02140.1| putative RNA-binding protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 94
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V N++F+ + +DL +F +YG V I +P DR TG RGFAFV + + QKA+D
Sbjct: 2 TIFVGNLSFKASEEDLRLVFAEYGTVKQIKLPVDRETGRKRGFAFVELENEADEQKAIDE 61
Query: 77 LDGRVVDGREITVQFA 92
LDG GR++ V A
Sbjct: 62 LDGATWMGRDLRVNKA 77
>gi|350407885|ref|XP_003488228.1| PREDICTED: probable RNA-binding protein 19-like [Bombus impatiens]
Length = 900
Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
I ++ + + N+++ T D++ LF+KYG + ++ +P DR T +GF + + A+ A
Sbjct: 354 IAESGRMFIRNLSYTITEDNIRQLFEKYGPISEVNLPIDRTTRKPKGFGTITFLMAEHAV 413
Query: 72 KAVDRLDGRVVDGREITV--QFAKYGPNAERIKEGLLNHSRDRSTGQ 116
KA LDG ++DGR + V AK P E + GL + T +
Sbjct: 414 KAYSELDGSILDGRMLHVLPAKAKSDPMEELDERGLTYKQKKELTAK 460
Score = 43.9 bits (102), Expect = 0.074, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTG--DSRGFAFVRYKYADEAQKAVD 75
+L+ N+ F+ T +++ LF +G++ + +P+ + G RGFAFV Y EA+KA
Sbjct: 781 ILIRNVPFQATVEEVTELFKAFGELKAVRLPK-KLVGVEKHRGFAFVEYYTKSEAKKAFK 839
Query: 76 RL-DGRVVDGREITVQFAKYGPNAERIKEGLLNH 108
L + GR + +++A+ E +++ H
Sbjct: 840 ALCQSTHLYGRRLVLEWAQTEEGVEEVRKRTAKH 873
>gi|116793427|gb|ABK26743.1| unknown [Picea sitchensis]
Length = 252
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 51/76 (67%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LLV NI+ +DL F+++G V D+++P++ T + RGF FV+Y+ D+A +A +
Sbjct: 57 LLVRNISLDARPEDLRIPFERFGPVKDVYLPKNFYTREPRGFGFVKYRNHDDAAEAKRHM 116
Query: 78 DGRVVDGREITVQFAK 93
+ +V+ GREI++ FA+
Sbjct: 117 NHQVIGGREISIVFAE 132
>gi|355557671|gb|EHH14451.1| hypothetical protein EGK_00378 [Macaca mulatta]
gi|355745027|gb|EHH49652.1| hypothetical protein EGM_00350 [Macaca fascicularis]
Length = 261
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 9/107 (8%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS + R PP+ SL V N+ T ++DL F +YG +VD+++P D T RGFA
Sbjct: 1 MSRYLR--PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFA 54
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFA---KYGPNAERIKEG 104
+V+++ +A+ A+ LD + + GR+I +QFA + PN + KEG
Sbjct: 55 YVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEG 101
>gi|409991967|ref|ZP_11275186.1| RNA-binding region RNP-1 [Arthrospira platensis str. Paraca]
gi|409937161|gb|EKN78606.1| RNA-binding region RNP-1 [Arthrospira platensis str. Paraca]
Length = 93
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+++ T DDL F +YG V IP DR TG SRGF FV DE + A+D
Sbjct: 2 SIYVGNLSYDVTPDDLSAAFAEYGTVKRSMIPTDRETGRSRGFGFVEMSSEDEEKVAIDA 61
Query: 77 LDGRVVDGREITVQFAKYGPNAERIKEGLLNH 108
LDG GR + V A+ P + G N
Sbjct: 62 LDGAEWKGRSLKVNKAR--PRDNNRQRGGFNR 91
>gi|401399856|ref|XP_003880652.1| probable RNA-binding protein 19, related [Neospora caninum Liverpool]
gi|325115063|emb|CBZ50619.1| probable RNA-binding protein 19, related [Neospora caninum Liverpool]
Length = 1099
Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/75 (45%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+LV N+ F+ +A DL LF YG V + IPR + G SRGFAFV + EAQ AVD L
Sbjct: 1015 VLVKNLAFQASASDLRGLFSAYGNVTRVCIPR-QHEGRSRGFAFVDFATKQEAQNAVDAL 1073
Query: 78 DGRVVDGREITVQFA 92
G + GR + ++ A
Sbjct: 1074 SGSHLYGRRLVLEPA 1088
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 39/68 (57%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LL+ N+ F T D+L L ++YG+V + + D T RGF FV + + + A A+ RL
Sbjct: 496 LLIQNLPFATAVDELRALCEEYGEVAEAHLVVDEETRKPRGFGFVTFVFPEHAVAALPRL 555
Query: 78 DGRVVDGR 85
+G + GR
Sbjct: 556 NGSIFQGR 563
>gi|119732355|gb|ABL98209.1| ELAV-like protein [Bombyx mori]
Length = 268
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 50/91 (54%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
++H G + +T+S+ + NI L+ LF YG +V + I RD +T S+G+
Sbjct: 173 INHISAVGEHNSPNTWSIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYG 232
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQF 91
FV + D+A A+ L+G ++ G+ ++V F
Sbjct: 233 FVTMRNYDQAAMAIQALNGYLLHGQPLSVSF 263
>gi|16905517|ref|NP_473357.1| serine/arginine-rich splicing factor 10 isoform 2 [Homo sapiens]
gi|122937372|ref|NP_001073856.1| serine/arginine-rich splicing factor 10 isoform 2 [Mus musculus]
gi|332807987|ref|XP_003307925.1| PREDICTED: uncharacterized protein LOC456627 [Pan troglodytes]
gi|344287388|ref|XP_003415435.1| PREDICTED: serine/arginine-rich splicing factor 10-like isoform 1
[Loxodonta africana]
gi|397140010|ref|XP_003846472.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|397478979|ref|XP_003810811.1| PREDICTED: serine/arginine-rich splicing factor 10 [Pan paniscus]
gi|403287348|ref|XP_003934911.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
gi|403287350|ref|XP_003934912.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
gi|441676930|ref|XP_004092715.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|47605579|sp|O75494.1|SRS10_HUMAN RecName: Full=Serine/arginine-rich splicing factor 10; AltName:
Full=40 kDa SR-repressor protein; Short=SRrp40; AltName:
Full=FUS-interacting serine-arginine-rich protein 1;
AltName: Full=Splicing factor SRp38; AltName:
Full=Splicing factor, arginine/serine-rich 13A; AltName:
Full=TLS-associated protein with Ser-Arg repeats;
Short=TASR; Short=TLS-associated protein with SR
repeats; AltName: Full=TLS-associated serine-arginine
protein; Short=TLS-associated SR protein
gi|47605750|sp|Q9R0U0.2|SRS10_MOUSE RecName: Full=Serine/arginine-rich splicing factor 10; AltName:
Full=FUS-interacting serine-arginine-rich protein 1;
AltName: Full=Neural-salient serine/arginine-rich
protein; AltName: Full=Neural-specific SR protein;
AltName: Full=Splicing factor, arginine/serine-rich 13A;
AltName: Full=TLS-associated protein with Ser-Arg
repeats; Short=TASR; Short=TLS-associated protein with
SR repeats; AltName: Full=TLS-associated serine-arginine
protein; Short=TLS-associated SR protein
gi|18034489|gb|AAL57514.1|AF449427_1 SRrp40 [Homo sapiens]
gi|3327957|gb|AAC26715.1| TLS-associated protein TASR-2 [Mus musculus]
gi|3327976|gb|AAC26727.1| TLS-associated protein TASR-2 [Homo sapiens]
gi|12852132|dbj|BAB29286.1| unnamed protein product [Mus musculus]
gi|13477159|gb|AAH05039.1| FUS interacting protein (serine/arginine-rich) 1 [Homo sapiens]
gi|15787483|gb|AAL06099.1| TLS-associated SR protein 2 [Homo sapiens]
gi|25006522|gb|AAN65380.1| splicing factor SRp38 [Homo sapiens]
gi|29144881|gb|AAH43060.1| FUS interacting protein (serine-arginine rich) 1 [Mus musculus]
gi|52789308|gb|AAH83082.1| FUS interacting protein (serine-arginine rich) 1 [Mus musculus]
gi|74214326|dbj|BAE40403.1| unnamed protein product [Mus musculus]
gi|74214388|dbj|BAE40431.1| unnamed protein product [Mus musculus]
gi|410223010|gb|JAA08724.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261892|gb|JAA18912.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261896|gb|JAA18914.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261898|gb|JAA18915.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302464|gb|JAA29832.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302466|gb|JAA29833.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302468|gb|JAA29834.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410330569|gb|JAA34231.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410330573|gb|JAA34233.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|417398022|gb|JAA46044.1| Putative serine/arginine-rich splicing factor 10 [Desmodus
rotundus]
Length = 262
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 9/107 (8%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS + R PP+ SL V N+ T ++DL F +YG +VD+++P D T RGFA
Sbjct: 1 MSRYLR--PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFA 54
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFA---KYGPNAERIKEG 104
+V+++ +A+ A+ LD + + GR+I +QFA + PN + KEG
Sbjct: 55 YVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEG 101
>gi|346986281|ref|NP_001231298.1| serine/arginine-rich splicing factor 10 isoform 1 [Sus scrofa]
gi|338784425|gb|AEI98875.1| serine/arginine-rich splicing factor 10 isoform 2 [Sus scrofa]
Length = 262
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 9/107 (8%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS + R PP+ SL V N+ T ++DL F +YG +VD+++P D T RGFA
Sbjct: 1 MSRYLR--PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFA 54
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFA---KYGPNAERIKEG 104
+V+++ +A+ A+ LD + + GR+I +QFA + PN + KEG
Sbjct: 55 YVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEG 101
>gi|226533389|ref|NP_001034357.2| RNA binding motif protein 19 [Gallus gallus]
Length = 957
Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 44/74 (59%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
++++ L V N+ F +T +DL +F KYG + +I P DR T +GFAF+ Y + A
Sbjct: 410 LSESGRLFVRNLPFTSTEEDLEKIFSKYGPLSEIHFPIDRLTKKPKGFAFITYMIPEHAV 469
Query: 72 KAVDRLDGRVVDGR 85
KA +DG+V GR
Sbjct: 470 KAYAEMDGQVFQGR 483
Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGD---SRGFAFVRYKYADEAQKA 73
+L + N+ F TT L F K G V I + + S GF FV YK + AQKA
Sbjct: 730 TLFIKNLNFTTTEGTLKETFSKVGAVKSCTISKKKDKAGTLLSMGFGFVEYKKPESAQKA 789
Query: 74 VDRLDGRVVDGREITVQFAK 93
+ RL G +VDG ++ V+ ++
Sbjct: 790 LRRLQGCIVDGHKLEVKISE 809
Score = 44.7 bits (104), Expect = 0.040, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRR-TGDSRGFAFVRYKYADEAQKAVDR 76
+LV NI F+ T ++ LF +G++ + +P+ TG RGF FV + +A+KA +
Sbjct: 833 ILVRNIPFQATVREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDFLTKQDAKKAFNA 892
Query: 77 L-DGRVVDGREITVQFAKYGPNAERIKEGLLNHSRD 111
L + GR + +++A E ++ +H D
Sbjct: 893 LCHSTHLYGRRLVLEWADTEETVEALRRRTADHFHD 928
Score = 40.8 bits (94), Expect = 0.58, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L+V N+ D LF +G + D + + + G R F F+ YK DEAQ A++
Sbjct: 4 LIVKNLPNGMKEDRFRKLFAAFGTLTDCCL-KFTKDGKFRKFGFIGYKSEDEAQAALNHF 62
Query: 78 DGRVVDGREITVQFAK 93
+ +D +TV+ K
Sbjct: 63 NRSFIDTSRVTVELCK 78
>gi|300360547|ref|NP_001177934.1| serine/arginine-rich splicing factor 10 isoform 3 [Homo sapiens]
gi|307133714|ref|NP_001182513.1| splicing factor, arginine/serine-rich 13A [Macaca mulatta]
gi|16265859|gb|AAL16666.1|AF419332_1 TLS-associated protein TASR-2 [Homo sapiens]
gi|193786066|dbj|BAG50956.1| unnamed protein product [Homo sapiens]
Length = 261
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 9/107 (8%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS + R PP+ SL V N+ T ++DL F +YG +VD+++P D T RGFA
Sbjct: 1 MSRYLR--PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFA 54
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFA---KYGPNAERIKEG 104
+V+++ +A+ A+ LD + + GR+I +QFA + PN + KEG
Sbjct: 55 YVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEG 101
>gi|46139099|ref|XP_391240.1| hypothetical protein FG11064.1 [Gibberella zeae PH-1]
Length = 127
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 47/79 (59%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N+++ TT + L F ++G+V D I RDR TG +RGF FV + ++A AVD L
Sbjct: 4 LYVGNLSWNTTDETLRQTFSEFGEVTDSIIMRDRDTGRARGFGFVTFSTEEQATAAVDAL 63
Query: 78 DGRVVDGREITVQFAKYGP 96
+ + +DGR I V A P
Sbjct: 64 NEQELDGRRIRVNVANARP 82
>gi|74179690|dbj|BAE22485.1| unnamed protein product [Mus musculus]
Length = 262
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 9/107 (8%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS + R PP+ SL V N+ T ++DL F +YG +VD+++P D T RGFA
Sbjct: 1 MSRYLR--PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFA 54
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAK---YGPNAERIKEG 104
+V+++ +A+ A+ LD + + GR+I +QFA+ PN + KEG
Sbjct: 55 YVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDLKTPNQMKAKEG 101
>gi|294933970|ref|XP_002780926.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239891073|gb|EER12721.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 235
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 55/95 (57%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
++ SL+V N+ + T+ + LF +YG++ D+++P D +G RGF FV + + +A
Sbjct: 66 ESCSLIVRNLNYDTSPQHVRSLFSRYGEIRDVYLPLDYNSGRPRGFGFVEFCDPRDVVEA 125
Query: 74 VDRLDGRVVDGREITVQFAKYGPNAERIKEGLLNH 108
+ +DG+VVDG I V A+ G + R L++
Sbjct: 126 KNAMDGKVVDGNAIQVDIAQRGRKSPRTMRRLISR 160
>gi|213513443|ref|NP_001133450.1| FUS-interacting serine-arginine-rich protein 1 [Salmo salar]
gi|209154048|gb|ACI33256.1| FUS-interacting serine-arginine-rich protein 1 [Salmo salar]
Length = 271
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 59/99 (59%), Gaps = 7/99 (7%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL + NI+ + +DL F +YG VVD++IP D + RGFA+++++
Sbjct: 7 PPNT----SLFIRNISDESRPEDLRREFGRYGPVVDVYIPLDFYSRRPRGFAYIQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFA---KYGPNAERIKEG 104
+A+ A+ LD + V GR+I +QFA + PN + KEG
Sbjct: 63 DAEDALHNLDRKWVCGRQIEIQFAQGDRKTPNQMQGKEG 101
>gi|409080475|gb|EKM80835.1| hypothetical protein AGABI1DRAFT_112564 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426197375|gb|EKV47302.1| hypothetical protein AGABI2DRAFT_192533 [Agaricus bisporus var.
bisporus H97]
Length = 168
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 22 NITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDGRV 81
N+++ TT + L F +G+V+D + RDR TG SRGF FV + + EA A++ L+ +
Sbjct: 33 NLSWNTTDETLRQAFSDFGQVLDSIVMRDRDTGRSRGFGFVTFSNSGEADAAINGLNEQE 92
Query: 82 VDGREITVQFAKYGP 96
+DGR I V A P
Sbjct: 93 LDGRRIKVNMANARP 107
>gi|388583201|gb|EIM23503.1| hypothetical protein WALSEDRAFT_67167 [Wallemia sebi CBS 633.66]
Length = 89
Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 47/81 (58%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
+ D + + N+++ T +DL F +G++ D + +DR+TG SRGF FV Y EA
Sbjct: 1 MNDNSKIYISNLSWSTNDEDLARAFSPFGQISDYIVMKDRQTGRSRGFGFVTYANDREAS 60
Query: 72 KAVDRLDGRVVDGREITVQFA 92
A++ ++ +DGR I V +A
Sbjct: 61 SALESMNEVELDGRRIRVNYA 81
>gi|195654321|gb|ACG46628.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|238010482|gb|ACR36276.1| unknown [Zea mays]
Length = 252
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 45/76 (59%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V I+++T L F KYG+V++ I DR +G SRGF FV Y ++EA A+ L
Sbjct: 32 LFVGGISYQTDDHSLRDEFAKYGQVIEARIIIDRESGRSRGFGFVTYTSSEEASAAITAL 91
Query: 78 DGRVVDGREITVQFAK 93
DG+ +DGR I V A
Sbjct: 92 DGKTLDGRSIRVNHAN 107
>gi|58269652|ref|XP_571982.1| glycine-rich RNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57228218|gb|AAW44675.1| glycine-rich RNA binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 182
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ V N+++ +T D L +F YG V D + +DR TG SRGF FV Y EA+ A+ +
Sbjct: 6 VYVGNLSWNSTDDTLLQVFSAYGTVTDCIVMKDRETGRSRGFGFVTYGSPQEAEAAIAAM 65
Query: 78 DGRVVDGREITVQFAK 93
+ + +DGR + V A
Sbjct: 66 NEQELDGRRVRVNMAN 81
>gi|428214099|ref|YP_007087243.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
gi|428002480|gb|AFY83323.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
Length = 104
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 45/77 (58%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+++ T +DL +F +YG V + +P DR TG RGFAFV K E A++
Sbjct: 2 SIYVGNLSYEVTQEDLTAVFAEYGSVQRVHLPTDRETGRPRGFAFVEMKSETEETAAIEA 61
Query: 77 LDGRVVDGREITVQFAK 93
LDG GR++ V AK
Sbjct: 62 LDGAEWMGRDMKVNKAK 78
>gi|22298986|ref|NP_682233.1| RNA binding protein [Thermosynechococcus elongatus BP-1]
gi|22295168|dbj|BAC08995.1| RNA binding protein [Thermosynechococcus elongatus BP-1]
Length = 90
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 49/79 (62%), Gaps = 4/79 (5%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAV-- 74
+L + N+++ T +DL +F+KYG + I +P DR TG RGFAFV + ADE Q+AV
Sbjct: 2 TLYIGNLSYEATENDLREVFEKYGAIRRIVLPVDRETGKRRGFAFV--ELADETQEAVAI 59
Query: 75 DRLDGRVVDGREITVQFAK 93
D LDG GR + V AK
Sbjct: 60 DDLDGATWLGRVLKVNKAK 78
>gi|395513917|ref|XP_003761168.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-binding protein 19
[Sarcophilus harrisii]
Length = 954
Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/79 (39%), Positives = 46/79 (58%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
D+ D+ L V N+ + +T +DL +F KYG + +I P D T +GFAFV Y + + A
Sbjct: 386 DLADSGRLFVRNLPYTSTEEDLEKIFAKYGPLSEIHYPIDGLTKKPKGFAFVTYMFPEHA 445
Query: 71 QKAVDRLDGRVVDGREITV 89
KA +DG+V GR + V
Sbjct: 446 VKAFAEVDGQVFQGRMLHV 464
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 9/103 (8%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGD---SRGFAFVRYKYADEAQKA 73
+L + N+ F TT + L +F K G V + + + S GF FV Y+ ++AQKA
Sbjct: 718 TLFIKNLNFSTTEEMLKEVFSKVGTVKSCTVSKKKNKAGVLLSMGFGFVEYRKPEQAQKA 777
Query: 74 VDRLDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDRSTGQ 116
+ +L G VVDG ++ V+ +ER + ++ +R R T
Sbjct: 778 LKQLQGSVVDGHKLEVKI------SERAIKPVVTSARQRQTAH 814
Score = 38.9 bits (89), Expect = 2.0, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L+V N+ + LF +G + D + + + G R F F+ +K +EAQ A+D
Sbjct: 4 LIVKNLPSGMKEERFRQLFAAFGTLTDCSL-KFTKDGKFRKFGFIGFKSEEEAQNALDHF 62
Query: 78 DGRVVDGREITVQFAK 93
+D +TV+F K
Sbjct: 63 HRSFIDTSRVTVEFCK 78
>gi|411119073|ref|ZP_11391453.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410710936|gb|EKQ68443.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 85
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 45/77 (58%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V N+++R TADDL +F +YG V + +P DR TG RGFAFV + A+
Sbjct: 2 TIYVGNLSYRATADDLTEVFAEYGAVKRVSLPMDRETGKMRGFAFVELEEDAHEDTAISE 61
Query: 77 LDGRVVDGREITVQFAK 93
LDG GR++ V AK
Sbjct: 62 LDGAEWMGRQLKVNKAK 78
>gi|357112195|ref|XP_003557895.1| PREDICTED: uncharacterized protein LOC100829528 [Brachypodium
distachyon]
Length = 244
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 52/76 (68%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LLV NI+ +D+ F+++G + D+++PR+ T + RGF FV+++Y+++A A L
Sbjct: 60 LLVRNISLTARLEDIRGPFEQFGPIKDVYLPRNFHTKELRGFGFVKFRYSEDAAYAKQEL 119
Query: 78 DGRVVDGREITVQFAK 93
+ +V+ GREI++ FA+
Sbjct: 120 NHQVICGREISIVFAE 135
>gi|119589928|gb|EAW69522.1| cold inducible RNA binding protein, isoform CRA_c [Homo sapiens]
gi|119589930|gb|EAW69524.1| cold inducible RNA binding protein, isoform CRA_c [Homo sapiens]
Length = 297
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Query: 13 TDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+D L V ++F T L +F KYG++ ++ + +DR T SRGF FV ++ D+A+
Sbjct: 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62
Query: 73 AVDRLDGRVVDGREITV-QFAKYGPNAERIKEG 104
A+ ++G+ VDGR+I V Q K N R G
Sbjct: 63 AMMAMNGKSVDGRQIRVDQAGKSSDNRSRGYRG 95
>gi|402219166|gb|EJT99240.1| eukaryotic translation initiation factor 3 [Dacryopinax sp. DJM-731
SS1]
Length = 297
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D +L V N++ DDL LF ++G+V +FI RDR TG +G+AFV ++ D AQ+A
Sbjct: 210 DMPTLRVTNLSEDAEEDDLRDLFQRFGRVARVFIGRDRETGVGKGYAFVSFEDRDSAQRA 269
Query: 74 VDRLDGRVVDGREITVQFA 92
+DR+ G ++VQ++
Sbjct: 270 LDRVHGMGYANLILSVQWS 288
>gi|389583810|dbj|GAB66544.1| RNA binding protein [Plasmodium cynomolgi strain B]
Length = 1084
Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 48/77 (62%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLL+ N++F T+ + + +F +GK+ D+++P D T RGF FV Y + A++A+
Sbjct: 7 SLLIKNLSFHTSPEKIRKIFQSFGKIRDVYLPLDHYTRRPRGFGFVEYYEPEYAKEAMSI 66
Query: 77 LDGRVVDGREITVQFAK 93
L+ +DG+EI + A+
Sbjct: 67 LNHSKIDGKEIKIIIAQ 83
>gi|388509350|gb|AFK42741.1| unknown [Lotus japonicus]
Length = 221
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ T +DL F +G + D+++PRD TG+ RGF FV+Y +A A
Sbjct: 40 SLLVRNLHRDTRTEDLHGPFSHFGPIKDVYLPRDYYTGNPRGFGFVQYVDPADAADAKYH 99
Query: 77 LDGRVVDGREITVQFAK 93
LDG+++ GRE+TV FA+
Sbjct: 100 LDGQILLGRELTVVFAE 116
>gi|440577321|emb|CCI55328.1| PH01B001I13.24 [Phyllostachys edulis]
Length = 196
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 52/85 (61%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
PP + +L + ++FRTT + L F+++G++ ++ + DR RGFAF+ Y +
Sbjct: 109 PPSLHAHVALFIEGLSFRTTEESLRSAFERFGQLTEVNLVMDRVAKRPRGFAFLSYANEE 168
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK 93
E++ A++ + G+ +DGR I V+ AK
Sbjct: 169 ESKNAMEGMHGKFLDGRVIFVEVAK 193
>gi|359806697|ref|NP_001241034.1| uncharacterized protein LOC100799124 [Glycine max]
gi|255645259|gb|ACU23127.1| unknown [Glycine max]
Length = 275
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 44/79 (55%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L + +++ T L F KYG+VVD I DR TG SRGF F+ Y +EA A+ L
Sbjct: 44 LFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSAIQAL 103
Query: 78 DGRVVDGREITVQFAKYGP 96
DG+ + GR I V +A P
Sbjct: 104 DGQDLHGRPIRVNYANERP 122
>gi|440793396|gb|ELR14581.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 964
Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 48/74 (64%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L++ N+ F+ T DL F +GK+VD+ IP+++ TG+ RGF FV + +EA A++++
Sbjct: 287 LIIRNLPFQATEADLSEKFAAHGKLVDVIIPKNKETGNPRGFGFVEFFTKEEAANALEKV 346
Query: 78 DGRVVDGREITVQF 91
+ + + GR + V +
Sbjct: 347 NAQPIRGRRVAVDW 360
>gi|303282859|ref|XP_003060721.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458192|gb|EEH55490.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 93
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 50/77 (64%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ + T +++ F++YG+V D++IP+D T +GFAFV + EA+ A D+
Sbjct: 2 SLLVRNLPYDATVEEIRTAFEEYGEVRDVYIPKDYHTKRPKGFAFVEFPDPREAELAEDK 61
Query: 77 LDGRVVDGREITVQFAK 93
LD + G E++VQ AK
Sbjct: 62 LDKTRLCGVEVSVQVAK 78
>gi|351725383|ref|NP_001238370.1| uncharacterized protein LOC100527079 [Glycine max]
gi|255631508|gb|ACU16121.1| unknown [Glycine max]
Length = 130
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 16 YSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVD 75
Y L V ++F TT + L F YG+V++ I DR + S+GF FV + DEA+ A++
Sbjct: 29 YKLFVGGLSFYTTENALSEAFSNYGQVIEAKIVTDRVSDRSKGFGFVTFASQDEAENAIE 88
Query: 76 RLDGRVVDGREITVQFAKYGPN 97
+ G+ ++GR I V +AK PN
Sbjct: 89 DMKGKTLNGRVIFVDYAK--PN 108
>gi|408393961|gb|EKJ73218.1| hypothetical protein FPSE_06642 [Fusarium pseudograminearum
CS3096]
Length = 112
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L + N+++ TT D L ++G ++D + RDR TG SRGF FV + +EA+ AV+ L
Sbjct: 5 LYIGNLSWNTTDDTLRNACQEFGMIIDSIVMRDRDTGRSRGFGFVTFGSVEEAENAVNGL 64
Query: 78 DGRVVDGREITVQFAK 93
+ + +DGR I V A
Sbjct: 65 NEQELDGRRIKVNMAN 80
>gi|224002947|ref|XP_002291145.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220972921|gb|EED91252.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 324
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 8 GPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYA 67
GPP + SLLV N+ + DL F + G+V D++IPRD + +GFAF+ Y
Sbjct: 185 GPPGV----SLLVRNVNGEISTQDLQMAFGRIGEVRDVYIPRDFHSQQPKGFAFIEYATP 240
Query: 68 DEAQKAVDRLDGRVVDGREITVQFAK 93
++A++A D ++ ++ GREI V +A+
Sbjct: 241 EQAREARDEMNHFMMKGREIEVVYAQ 266
>gi|326507732|dbj|BAJ86609.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 100
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 47/83 (56%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N+++ L LF + GKV+D + DR +G SRGF FV Y ADE A+ L
Sbjct: 16 LYVGNLSWGVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNL 75
Query: 78 DGRVVDGREITVQFAKYGPNAER 100
DG +DGR+I V A+ P +R
Sbjct: 76 DGVDLDGRQIRVTVAESKPREQR 98
>gi|66815353|ref|XP_641693.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|74997136|sp|Q54WM4.1|EIF3G_DICDI RecName: Full=Eukaryotic translation initiation factor 3 subunit G;
Short=eIF3g; AltName: Full=Eukaryotic translation
initiation factor 3 RNA-binding subunit; Short=eIF-3
RNA-binding subunit; AltName: Full=Eukaryotic
translation initiation factor 3 subunit 4
gi|60469725|gb|EAL67713.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 233
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 10 PDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADE 69
P +D S++V N++ T DL+ LF ++G V + IP+ G S+GFA+V Y + D
Sbjct: 146 PSGSDVPSIMVSNLSQNATEKDLYELFGQFGPVSRVSIPKSME-GSSKGFAYVTYNHLDS 204
Query: 70 AQKAVDRLDGRVVDGREITVQFAK 93
A+KA+ +L+G D ++++FAK
Sbjct: 205 AEKALKQLNGHRYDYLVLSLEFAK 228
>gi|326527061|dbj|BAK04472.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 139
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V + RTT+D L F K+G+V D + DR +G SRGF FV+Y +EA + +
Sbjct: 41 NLFVSGLNKRTTSDGLREAFSKFGQVTDARVITDRISGYSRGFGFVKYATVEEAAEGIKG 100
Query: 77 LDGRVVDGREITVQFAK 93
+DG+ DG I ++AK
Sbjct: 101 MDGKFFDGWVIFAEYAK 117
>gi|401408831|ref|XP_003883864.1| CBR-RSP-4 protein, related [Neospora caninum Liverpool]
gi|325118281|emb|CBZ53832.1| CBR-RSP-4 protein, related [Neospora caninum Liverpool]
Length = 192
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 48/77 (62%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLL+ N+ F T+ D + +F+K+G+V D+++P D T RGF FV + AQ+A+
Sbjct: 6 SLLIRNLCFETSPDRVRQIFEKFGRVRDVYLPLDHFTKRPRGFGFVEFYEEAAAQEAMRE 65
Query: 77 LDGRVVDGREITVQFAK 93
+D ++DG E+ V A+
Sbjct: 66 MDRTMIDGNEVYVIIAQ 82
>gi|317139650|ref|XP_003189187.1| C6 transcription factor [Aspergillus oryzae RIB40]
Length = 1086
Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 10 PDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADE 69
PD +T + V N+ + TADDL +KYG V ++I D R G S+GF +V++ D
Sbjct: 902 PDPKET--VFVGNLFYDVTADDLRKQMEKYGVVESVYITFDNR-GMSKGFGYVQFDSIDS 958
Query: 70 AQKAVDRLDGRVVDGREITVQFAKYGPNAER 100
A++A+D + RV +GR + V FA+ + R
Sbjct: 959 ARRAIDAMHMRVYEGRRVIVAFAQNNIDQHR 989
Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 47/87 (54%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L + N+ F T D+ LF V+D+ + DRRTG RGFA + + A+ A +
Sbjct: 997 TLYLGNLPFEMTDRDINELFRDIVNVIDVRVSVDRRTGMFRGFAHAEFINVESARAAFEI 1056
Query: 77 LDGRVVDGREITVQFAKYGPNAERIKE 103
L + GR++ + +++ A+R+++
Sbjct: 1057 LSRKAPYGRKLRLDYSQTNRRADRLED 1083
>gi|449488891|ref|XP_004174435.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 10 [Taeniopygia guttata]
Length = 262
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL V N+ T ++DL F +YG +VD+++P D T RGFA+V+++ +A+ A+
Sbjct: 11 SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHN 70
Query: 77 LDGRVVDGREITVQFA---KYGPNAERIKEG 104
LD + + GR+I +QFA + PN + KEG
Sbjct: 71 LDRKWICGRQIEIQFAQGDRKTPNQMKAKEG 101
>gi|125558733|gb|EAZ04269.1| hypothetical protein OsI_26412 [Oryza sativa Indica Group]
Length = 133
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V + RTT+D L F K+G+V++ + DR +G SRGF FV+Y +EA + +
Sbjct: 36 NLFVSGLNKRTTSDGLREAFSKFGQVIEARVITDRISGYSRGFGFVKYATVEEAGEGIKG 95
Query: 77 LDGRVVDGREITVQFAK 93
+DG+ +DG I ++AK
Sbjct: 96 MDGKFLDGWVIFAEYAK 112
>gi|411118097|ref|ZP_11390478.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410711821|gb|EKQ69327.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 100
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+++ T+DDL F +YG V + +P DR TG RGFAFV + E KA++
Sbjct: 2 SIYVGNLSYNVTSDDLTQTFAEYGTVKRVQLPTDRETGRLRGFAFVEMETDAEEDKAIEA 61
Query: 77 LDGRVVDGREITVQFAKYGPNAERIKEG 104
LDG GR++ V A+ P ER G
Sbjct: 62 LDGAEWMGRDLKVNKAR--PREERGSSG 87
>gi|115474525|ref|NP_001060859.1| Os08g0117100 [Oryza sativa Japonica Group]
gi|50725630|dbj|BAD33097.1| putative RNA-binding protein RNP-D precursor [Oryza sativa Japonica
Group]
gi|113622828|dbj|BAF22773.1| Os08g0117100 [Oryza sativa Japonica Group]
gi|125559951|gb|EAZ05399.1| hypothetical protein OsI_27607 [Oryza sativa Indica Group]
gi|215704603|dbj|BAG94231.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 319
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 45/76 (59%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N+ R DDL+ LF YG V+ + I RD TG SRG FV + EA+ A++ L
Sbjct: 136 LFVCNLPRRCDVDDLYELFKPYGTVLSVEISRDPETGLSRGCGFVTMRSLPEARTAMNAL 195
Query: 78 DGRVVDGREITVQFAK 93
DG +DGRE+ V+ +
Sbjct: 196 DGFDLDGREMLVKLSS 211
>gi|212275199|ref|NP_001130054.1| uncharacterized protein LOC100191146 [Zea mays]
gi|194688180|gb|ACF78174.1| unknown [Zea mays]
gi|414878270|tpg|DAA55401.1| TPA: glycine-rich RNA-binding protein 7 [Zea mays]
Length = 254
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 45/76 (59%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V I+++T L F KYG+V++ I DR +G SRGF FV Y ++EA A+ L
Sbjct: 32 LFVGGISYQTDDHSLRDEFAKYGQVIEARIIIDRESGRSRGFGFVTYTSSEEASAAITAL 91
Query: 78 DGRVVDGREITVQFAK 93
DG+ +DGR I V A
Sbjct: 92 DGKTLDGRSIRVNHAN 107
>gi|119589931|gb|EAW69525.1| cold inducible RNA binding protein, isoform CRA_d [Homo sapiens]
Length = 311
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Query: 13 TDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+D L V ++F T L +F KYG++ ++ + +DR T SRGF FV ++ D+A+
Sbjct: 15 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 74
Query: 73 AVDRLDGRVVDGREITV-QFAKYGPNAERIKEG 104
A+ ++G+ VDGR+I V Q K N R G
Sbjct: 75 AMMAMNGKSVDGRQIRVDQAGKSSDNRSRGYRG 107
>gi|50552081|ref|XP_503515.1| YALI0E03828p [Yarrowia lipolytica]
gi|74689524|sp|Q6C747.1|EIF3G_YARLI RecName: Full=Eukaryotic translation initiation factor 3 subunit G;
Short=eIF3g; AltName: Full=Eukaryotic translation
initiation factor 3 RNA-binding subunit; Short=eIF-3
RNA-binding subunit; AltName: Full=Translation
initiation factor eIF3 p33 subunit homolog; Short=eIF3
p33 homolog
gi|49649384|emb|CAG79094.1| YALI0E03828p [Yarrowia lipolytica CLIB122]
Length = 294
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
D D +L V N++ T DDL +F KYG + +++ +DR TG RGFAFV Y A
Sbjct: 209 DDDDELTLRVTNLSEEATDDDLRRMFGKYGMINRVYVAKDRDTGRPRGFAFVTYTLKSHA 268
Query: 71 QKAVDRLDGRVVDGREITVQFAK 93
Q A++ +DG D + V ++K
Sbjct: 269 QAALEAMDGHGFDNLIMKVDYSK 291
>gi|47209886|emb|CAF94406.1| unnamed protein product [Tetraodon nigroviridis]
Length = 98
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 6/87 (6%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V NI+ + +DL F +YG +VD++IP D T RGFA+++Y + D
Sbjct: 7 PPNT----SLFVRNISDESRPEDLRREFGRYGPIVDVYIPLDFYTRQPRGFAYIQYIFED 62
Query: 69 --EAQKAVDRLDGRVVDGREITVQFAK 93
+A+ A+ LD + V GR+I +QFA+
Sbjct: 63 VRDAEDALHSLDRKWVCGRQIEIQFAQ 89
>gi|395324282|gb|EJF56725.1| translation initiation factor 3, RNA-binding subunit [Dichomitus
squalens LYAD-421 SS1]
Length = 290
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 50/80 (62%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D +L V NI+ T +DL LF +G+V +++ RDR TG +GFAFV ++ AQKA
Sbjct: 206 DLPTLRVTNISEDTQENDLRDLFGGFGRVARVYVGRDRETGAGKGFAFVSFEEKAVAQKA 265
Query: 74 VDRLDGRVVDGREITVQFAK 93
++++ GR D + +Q+++
Sbjct: 266 MEKMHGRGYDNLILNIQWSQ 285
>gi|357144628|ref|XP_003573359.1| PREDICTED: nucleolin-like [Brachypodium distachyon]
Length = 153
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V ++ RTT D L F K+G+V+ + DR TG S+GF FVRY ++A K ++
Sbjct: 49 NLFVSGLSKRTTTDGLREAFAKFGEVMHARVVTDRVTGFSKGFGFVRYASVEDASKGIEG 108
Query: 77 LDGRVVDGREITVQFAKYGP 96
+DG+ +DG I ++A+ P
Sbjct: 109 MDGKFLDGWVIFAEYARPRP 128
>gi|225435731|ref|XP_002285703.1| PREDICTED: uncharacterized protein LOC100263951 [Vitis vinifera]
Length = 245
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 51/77 (66%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL F ++G + DI++PRD TG+ RGF FV+Y +A +A +
Sbjct: 39 SLLVRNLRHDCRGEDLRRPFGQFGPLKDIYLPRDYYTGEPRGFGFVQYVDPADAAEAKYQ 98
Query: 77 LDGRVVDGREITVQFAK 93
+DG+++ GRE+TV FA+
Sbjct: 99 MDGQILHGRELTVVFAE 115
>gi|172035063|ref|YP_001801564.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|354551929|ref|ZP_08971237.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
gi|171696517|gb|ACB49498.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|353555251|gb|EHC24639.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
Length = 81
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 42/77 (54%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+ + T DL +F YG V I IP DR TG RGFAFV +E KA+D
Sbjct: 2 SIYVGNLAYEVTDADLNTVFSDYGSVKRIHIPTDRETGRPRGFAFVEMDTEEEESKAIDT 61
Query: 77 LDGRVVDGREITVQFAK 93
LDG GR + V A+
Sbjct: 62 LDGAEWMGRSMKVNQAR 78
>gi|115472673|ref|NP_001059935.1| Os07g0549800 [Oryza sativa Japonica Group]
gi|28564803|dbj|BAC57733.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|113611471|dbj|BAF21849.1| Os07g0549800 [Oryza sativa Japonica Group]
gi|125600644|gb|EAZ40220.1| hypothetical protein OsJ_24665 [Oryza sativa Japonica Group]
gi|215767980|dbj|BAH00209.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 133
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V + RTT+D L F K+G+V++ + DR +G SRGF FV+Y +EA + +
Sbjct: 36 NLFVSGLNKRTTSDGLREAFSKFGQVIEARVITDRISGYSRGFGFVKYATVEEAGEGIKG 95
Query: 77 LDGRVVDGREITVQFAK 93
+DG+ +DG I ++AK
Sbjct: 96 MDGKFLDGWVIFAEYAK 112
>gi|336374814|gb|EGO03150.1| hypothetical protein SERLA73DRAFT_174588 [Serpula lacrymans var.
lacrymans S7.3]
gi|336387791|gb|EGO28935.1| hypothetical protein SERLADRAFT_456184 [Serpula lacrymans var.
lacrymans S7.9]
Length = 291
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
M G +G D D +L V NI+ T +DL LF +G+V +++ RDR TG +GFA
Sbjct: 195 MGRAGGTGSRD--DLPTLRVTNISEDTQENDLRELFGGFGRVARVYVGRDRETGAGKGFA 252
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNA 98
FV ++ AQKA++++ G+ D ++VQ+++ P+
Sbjct: 253 FVSFEDRAVAQKAMEKVHGKGYDNLILSVQWSQPRPDG 290
>gi|225423629|ref|XP_002274983.1| PREDICTED: glycine-rich RNA-binding protein 2 [Vitis vinifera]
gi|359473083|ref|XP_003631246.1| PREDICTED: glycine-rich RNA-binding protein 2-like [Vitis vinifera]
gi|297738010|emb|CBI27211.3| unnamed protein product [Vitis vinifera]
gi|297738011|emb|CBI27212.3| unnamed protein product [Vitis vinifera]
Length = 140
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 50/80 (62%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
++V N+++ T+ L F K+G++V++ + +D+ RG+AF++Y D A A++ +
Sbjct: 40 IMVTNLSYATSKSSLQEEFSKFGQIVEVDVVKDKAAKRPRGYAFIQYTSQDHAMLALENM 99
Query: 78 DGRVVDGREITVQFAKYGPN 97
D + +DGR + V+ AK G N
Sbjct: 100 DHKYLDGRVVCVELAKPGKN 119
>gi|185133178|ref|NP_001117016.1| hyperosmotic glycine rich protein [Salmo salar]
gi|28173040|gb|AAO32675.1| hyperosmotic glycine rich protein [Salmo salar]
Length = 205
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
++D L V ++F TT L F KYG + + DR TG RGF FV+Y ++A+
Sbjct: 1 MSDEGKLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAK 60
Query: 72 KAVDRLDGRVVDGREITVQFA 92
A+D ++G+ +DGR I V A
Sbjct: 61 DAMDAMNGQSLDGRTIRVNEA 81
>gi|449524006|ref|XP_004169014.1| PREDICTED: uncharacterized protein LOC101227075 [Cucumis sativus]
Length = 305
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV NI ++L F+++G V D++IP+D TG+ RGFAFV + EA +A
Sbjct: 54 SLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYH 113
Query: 77 LDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDRSTGQG 117
++G+ GREITV A + + E + SR +G G
Sbjct: 114 MNGKKFAGREITVVLAA---ESRKRPEQMRQRSRRGPSGYG 151
>gi|347970549|ref|XP_003436593.1| AGAP013051-PA [Anopheles gambiae str. PEST]
gi|333466723|gb|EGK96347.1| AGAP013051-PA [Anopheles gambiae str. PEST]
Length = 420
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 49/74 (66%)
Query: 27 TTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDGRVVDGRE 86
TT L LF +YG V DI + D +T SRG++F+ +K+A +A++A +L+G +++GR+
Sbjct: 302 TTEKTLMKLFSRYGHVKDIKLIYDGKTNVSRGYSFIYFKHASDARRAQRKLNGTMLEGRK 361
Query: 87 ITVQFAKYGPNAER 100
+ V F++ P+ R
Sbjct: 362 VRVDFSRSKPHEPR 375
>gi|255584869|ref|XP_002533150.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223527045|gb|EEF29231.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 265
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 49/73 (67%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV NI ++L F+++G V D++IP+D TG+ RGFAFV++ +A +A R
Sbjct: 44 SLLVRNIPLDCRPEELRAPFERFGVVRDVYIPKDYYTGEPRGFAFVQFVDTYDAMEAQHR 103
Query: 77 LDGRVVDGREITV 89
++G++ GREI+V
Sbjct: 104 MNGQIFAGREISV 116
>gi|159163576|pdb|1X5S|A Chain A, Solution Structure Of Rrm Domain In A18 Hnrnp
Length = 102
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 13 TDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+D L V ++F T L +F KYG++ ++ + +DR T SRGF FV ++ D+A+
Sbjct: 10 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 69
Query: 73 AVDRLDGRVVDGREITV-QFAKYGPN 97
A+ ++G+ VDGR+I V Q K N
Sbjct: 70 AMMAMNGKSVDGRQIRVDQAGKSSDN 95
>gi|356519124|ref|XP_003528224.1| PREDICTED: uncharacterized protein LOC100801928 [Glycine max]
Length = 656
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L + +++ A L + +YG+VVD I DR TG RGF F+ Y DEA +A+ L
Sbjct: 44 LFIGGVSYSIDAQSLGEICSQYGQVVDARIIMDRETGRHRGFGFITYSNVDEASRALQAL 103
Query: 78 DGRVVDGREITVQFA 92
DG+ +DGR + V+FA
Sbjct: 104 DGQDLDGRRVEVKFA 118
>gi|255691172|ref|ZP_05414847.1| RNA-binding protein [Bacteroides finegoldii DSM 17565]
gi|260623075|gb|EEX45946.1| hypothetical protein BACFIN_06178 [Bacteroides finegoldii DSM
17565]
Length = 99
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ + +++RT DL LF ++G+V + DR TG+SRGFAFV +E QKA+D
Sbjct: 2 NIYIAGLSYRTNDADLTNLFAEFGEVSSAKVIMDRETGNSRGFAFVEMTSDEEGQKAIDE 61
Query: 77 LDGRVVDGREITVQFAKYGPNAER 100
L+G D + I+V A+ P AE+
Sbjct: 62 LNGVEYDQKVISVSVAR--PRAEK 83
>gi|357121842|ref|XP_003562626.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 275
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 46/83 (55%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N+++ L LF + GKV+D + DR +G SRGF FV Y ADE A+ L
Sbjct: 191 LYVGNLSWGVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNL 250
Query: 78 DGRVVDGREITVQFAKYGPNAER 100
DG +DGR+I V A+ P R
Sbjct: 251 DGVDLDGRQIRVTVAESKPREPR 273
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%)
Query: 13 TDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
++ L V N+ F + L LF++ G V + + DR TG SRGF FV A+E
Sbjct: 81 SEDLKLFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMSTAEEVSA 140
Query: 73 AVDRLDGRVVDGREITVQ 90
AV++ +G GR + V
Sbjct: 141 AVEQFNGYTFQGRPLRVN 158
>gi|242045928|ref|XP_002460835.1| hypothetical protein SORBIDRAFT_02g035890 [Sorghum bicolor]
gi|241924212|gb|EER97356.1| hypothetical protein SORBIDRAFT_02g035890 [Sorghum bicolor]
Length = 131
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V + RTT++ L F K+G+V++ + DR +G SRGF FV+Y EA +A+
Sbjct: 37 NLFVSGLNKRTTSNGLKEAFSKFGQVIEARVITDRISGYSRGFGFVKYATVQEAGEAIKG 96
Query: 77 LDGRVVDGREITVQFAK 93
+DG+ +DG I ++AK
Sbjct: 97 MDGKFLDGWVIFAEYAK 113
>gi|255556984|ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223541388|gb|EEF42939.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 280
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 45/79 (56%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N+++ L F + GKVVD + DR +G SRGF FV Y A+E + A+D L
Sbjct: 198 LYVGNLSWSVDNLALESFFSEQGKVVDAKVVYDRESGRSRGFGFVTYSSAEEVENAIDSL 257
Query: 78 DGRVVDGREITVQFAKYGP 96
+G +DGR I V A+ P
Sbjct: 258 NGAELDGRAIRVSVAEARP 276
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N+ F + L LF+ G V + + D+ TG SRGF FV DE + A +
Sbjct: 94 LFVGNLPFNVDSAQLAGLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSIDEVEAAAQQF 153
Query: 78 DGRVVDGREITVQFAKYGPNAER 100
+G ++GR + V GP +R
Sbjct: 154 NGYELEGRALRV---NSGPPPQR 173
>gi|302543566|ref|ZP_07295908.1| RNA-binding protein [Streptomyces hygroscopicus ATCC 53653]
gi|302461184|gb|EFL24277.1| RNA-binding protein [Streptomyces himastatinicus ATCC 53653]
Length = 86
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N++++TT DDL LF +G V+D + DR TG SRGF FV D A+KA+ +L
Sbjct: 5 LHVGNLSYQTTKDDLEKLFAPFGAVMDATVITDRDTGRSRGFGFVEMADMD-AEKAMAQL 63
Query: 78 DGRVVDGREITVQFAK 93
DG+ ++GR +TV A+
Sbjct: 64 DGQEMNGRCVTVTEAR 79
>gi|322787083|gb|EFZ13307.1| hypothetical protein SINV_16564 [Solenopsis invicta]
Length = 859
Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 54/101 (53%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
I ++ + + N+T+ T DD+ LF+KYG + ++ +P DR T +GF V + + A
Sbjct: 311 IAESGRIFIRNLTYTVTEDDIKKLFEKYGPLSEVDLPVDRITRKPKGFGTVTFLMPEHAV 370
Query: 72 KAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDR 112
KA LDG V+DGR + + K + E I L + + +
Sbjct: 371 KAYSELDGSVLDGRMLHILPGKTKASLEDIDTENLTYKQKK 411
Score = 45.8 bits (107), Expect = 0.020, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDR-RTGDSRGFAFVRYKYADEAQKAVDR 76
+LV NI F+ T ++ LF YG++ + +P+ T RGFAF+ Y +A+KA +
Sbjct: 737 ILVRNIPFQATIQEVTELFKSYGELKAVRLPKKLIGTEKHRGFAFIEYYTKTDAKKAFEA 796
Query: 77 L-DGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDRST 114
L + GR + +++A+ E I+ H S+
Sbjct: 797 LCQSTHLYGRRLVLEWAQAEEGIEEIRRRTAKHFYQESS 835
Score = 41.2 bits (95), Expect = 0.44, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 10 PDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFI-----PRDRRTGDSRGFAFVRY 64
PD T L V NI F TT + L F K G + + I P + S G+ F+RY
Sbjct: 629 PDTT----LFVKNINFSTTEEQLKDYFGKCGPLHYVTIATKMNPENPAEKLSMGYGFIRY 684
Query: 65 KYADEAQKAVDRLDGRVVDGREITVQ 90
K +A +A+ L V+DG+ + ++
Sbjct: 685 KRKLDADRALKTLQMSVLDGKSLELK 710
>gi|145493210|ref|XP_001432601.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399714|emb|CAK65204.1| unnamed protein product [Paramecium tetraurelia]
Length = 388
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 6 RSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYK 65
++GPP +L V ++ DL LF YG V+ + D +TG S+GF FV +
Sbjct: 278 KTGPPGA----NLFVFHLPNEHKDSDLMDLFSSYGNVISARVMTDPKTGKSKGFGFVSFD 333
Query: 66 YADEAQKAVDRLDGRVVDGREITVQFAK 93
+ AQKA + +DG ++D ++++V F +
Sbjct: 334 KQESAQKAKEAMDGHLIDKKKLSVTFKQ 361
>gi|340721943|ref|XP_003399372.1| PREDICTED: probable RNA-binding protein 19-like [Bombus terrestris]
Length = 901
Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/96 (34%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
I ++ + + N+++ T D++ LF+KYG + ++ +P DR T +GF V + + A
Sbjct: 355 IAESGRMFIRNLSYTITEDNIRQLFEKYGPLSEVNLPIDRTTRKPKGFGTVAFLMPEHAV 414
Query: 72 KAVDRLDGRVVDGREITV--QFAKYGPNAERIKEGL 105
KA LDG ++DGR + V AK P E K+GL
Sbjct: 415 KAYSELDGSILDGRMLHVLPAKAKSDPMEELDKKGL 450
Score = 43.9 bits (102), Expect = 0.074, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTG--DSRGFAFVRYKYADEAQKAVD 75
+L+ N+ F+ T +++ LF +G++ + +P+ + G RGFAFV Y EA+KA
Sbjct: 782 ILIRNVPFQATVEEVTELFKAFGELKAVRLPK-KLVGVEKHRGFAFVEYYTKSEAKKAFK 840
Query: 76 RL-DGRVVDGREITVQFAKYGPNAERIKEGLLNH 108
L + GR + +++A+ E +++ H
Sbjct: 841 ALCQSTHLYGRRLVLEWAQTEEGVEEVRKRTAKH 874
>gi|3342756|gb|AAC41383.1| RNA-binding protein AxRNBP [Ambystoma mexicanum]
Length = 144
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%)
Query: 13 TDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+D L V ++F + L F KYG V D + +DR TG SRGF FV ++ +A++
Sbjct: 4 SDEGKLFVGGLSFDSNEHSLESAFSKYGDVCDAVVVKDRETGRSRGFGFVTFRNPSDAKE 63
Query: 73 AVDRLDGRVVDGREITVQFA 92
A+ ++G +DGR+I V A
Sbjct: 64 ALHAMNGESLDGRQIRVDLA 83
>gi|407850128|gb|EKG04639.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 477
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L + NI + +L LF YG+++ + R+ TG S G AFVRY +EA A+
Sbjct: 116 NLFISNIPHKMEQRELENLFAPYGQILSAAVMRNIHTGKSLGTAFVRYASTEEAMSAIKG 175
Query: 77 LDGRVVDGREITVQFAK----YGPNAERIKE 103
+ G+ + GR I VQ+AK Y P E K+
Sbjct: 176 MSGKRIGGRAIAVQWAKKQHDYAPVGEARKK 206
>gi|301759721|ref|XP_002915754.1| PREDICTED: hypothetical protein LOC100477296 [Ailuropoda
melanoleuca]
Length = 440
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + D+ I D+++ SRGFAFV
Sbjct: 259 HVGNRANPDPN--CCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFV 316
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D+A++A +R +G +DGR I V F+
Sbjct: 317 YFENVDDAKEAKERANGMELDGRRIRVDFS 346
>gi|226504376|ref|NP_001146285.1| uncharacterized protein LOC100279860 [Zea mays]
gi|219886507|gb|ACL53628.1| unknown [Zea mays]
gi|413919482|gb|AFW59414.1| hypothetical protein ZEAMMB73_904714 [Zea mays]
Length = 881
Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LLV N+ F T DL LF +G++ + +P + G RGFAFV Y EAQ A+ L
Sbjct: 760 LLVRNVAFEATEKDLRQLFSPFGQIKSLRLPM--KFGSHRGFAFVEYVTKQEAQNALQAL 817
Query: 78 DGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDRSTG 115
+ GR + ++ AK G E ++E D S+G
Sbjct: 818 ASTHLYGRHLVIERAKEGETLEELRERTAAQFVDESSG 855
Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 41/80 (51%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
+T L + N+ + T+ DDL L +YG V I ++ T S G +V + D A +A
Sbjct: 343 ETGRLYICNLPYATSEDDLVELCRQYGDVEQAHIVVNKATKISTGRGYVLFSLPDSAVRA 402
Query: 74 VDRLDGRVVDGREITVQFAK 93
+D LD GR + V+ AK
Sbjct: 403 LDELDNSSFQGRVLRVKAAK 422
Score = 40.0 bits (92), Expect = 1.1, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 9/110 (8%)
Query: 10 PDITDTYSLLVLNITFRTTADDLFPLFD---KYGKVVDIFIPRDRRTGD--SRGFAFVRY 64
PD ++ S+ V N+ F+TT + L F K G + + + + G S GF FV +
Sbjct: 652 PDRVESRSVFVKNLNFKTTDESLKQHFSTKLKSGSLKSATVKKHVKKGKNVSMGFGFVEF 711
Query: 65 KYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDRST 114
+ A L G V+DG + +Q + + K+ + +D+S+
Sbjct: 712 DSVETATGVCKDLQGTVLDGHALILQLCHVKKDGQAAKK----NGKDKSS 757
>gi|50307487|ref|XP_453723.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74690224|sp|Q6CQR6.1|MRD1_KLULA RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|49642857|emb|CAH00819.1| KLLA0D14949p [Kluyveromyces lactis]
Length = 878
Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 43/74 (58%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
I +T L + NI + T DD LF YG++ ++ I D RTG S+GFA+V +K AD A
Sbjct: 326 IRETGRLFLRNILYTATEDDFRKLFSPYGELEEVHIAVDTRTGQSKGFAYVLFKNADNAA 385
Query: 72 KAVDRLDGRVVDGR 85
A LD ++ GR
Sbjct: 386 TAFVELDKQIFQGR 399
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
++V N+ F T D+F LF +G++ + +P+ + +RGFAFV + EA+ A+D+L
Sbjct: 754 IIVKNLPFEATRKDVFELFSSFGQLKSVRVPK-KFDKSARGFAFVEFLLPKEAENAMDQL 812
Query: 78 DGRVVDGREITVQFAKYGP 96
G + GR + ++F + P
Sbjct: 813 QGVHLLGRRLVMEFVEQDP 831
Score = 37.0 bits (84), Expect = 9.9, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 45/92 (48%), Gaps = 10/92 (10%)
Query: 6 RSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFI---PRDRRTGD--SRGFA 60
++GP T S+ + N+ F TT+ L F + V + P ++ G S GF
Sbjct: 646 QAGP-----TVSIFIKNLNFSTTSQQLTEKFKPFNGFVVAQVKTKPDPKQPGKTLSMGFG 700
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFA 92
F +K ++A + ++G ++DG ++ ++ +
Sbjct: 701 FAEFKTKEQANAVISAMEGTILDGHKLQLKLS 732
>gi|37520960|ref|NP_924337.1| RNA-binding protein [Gloeobacter violaceus PCC 7421]
gi|35211955|dbj|BAC89332.1| RNA-binding protein [Gloeobacter violaceus PCC 7421]
Length = 122
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 44/80 (55%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V N+ F T ++ F +YG+V + IP DR TG RGFAFV + Q A+D
Sbjct: 2 TLFVGNLPFSATEQEIVEAFTEYGEVKSVKIPMDRETGRPRGFAFVDLESETAEQAAIDD 61
Query: 77 LDGRVVDGREITVQFAKYGP 96
LDG + REI V A+ P
Sbjct: 62 LDGATWNNREIRVNKAEPRP 81
>gi|255713222|ref|XP_002552893.1| KLTH0D03916p [Lachancea thermotolerans]
gi|238934273|emb|CAR22455.1| KLTH0D03916p [Lachancea thermotolerans CBS 6340]
Length = 505
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
P +DT L + N++F D++F F ++G+VV + +P T +GF +V+Y D
Sbjct: 352 PSQPSDT--LFLGNLSFNADRDNIFETFAEHGEVVSVRLPTHPETNQPKGFGYVQYSSVD 409
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYGPNAE 99
EAQKA + L G +D R + + F+ P E
Sbjct: 410 EAQKAFEALQGHYIDNRPVRLDFSTPKPRDE 440
>gi|223999513|ref|XP_002289429.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974637|gb|EED92966.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 77
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N+++ T L LF++YG+V+D +IP DR TG RGFAF+ DEA A D
Sbjct: 1 LYVGNLSWGTEEGALRELFEEYGRVIDCYIPVDRETGQHRGFAFITMG-PDEALVAADET 59
Query: 78 DGRVVDGREITVQFAK 93
DG +DGR + V A+
Sbjct: 60 DGYELDGRILRVNEAQ 75
>gi|392588092|gb|EIW77425.1| translation initiation factor eIF3g [Coniophora puteana RWD-64-598
SS2]
Length = 298
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 57/95 (60%), Gaps = 2/95 (2%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
GR G D D +L V NI+ T +DL LF ++G+V +++ RDR TG +GFAFV
Sbjct: 205 MGRPGRGD--DLPTLRVTNISEDTQENDLRDLFGRFGRVARVYVGRDRETGAGKGFAFVS 262
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNA 98
++ AQKA++++ G D ++VQ+++ P+
Sbjct: 263 FEERAVAQKAMEKVHGMGYDNLILSVQWSQPRPDG 297
>gi|326532152|dbj|BAK01452.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 208
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 9/100 (9%)
Query: 3 HFGRSGPPDITDTY---------SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRT 53
+ GR+ P D Y SLLV N+ DDL F ++G++ D++IPRD T
Sbjct: 16 YRGRARSPSPRDRYDGRGRDLPTSLLVRNLRRDCRPDDLRRPFAQFGRLKDVYIPRDYYT 75
Query: 54 GDSRGFAFVRYKYADEAQKAVDRLDGRVVDGREITVQFAK 93
+ RGF FV+Y D+A A +DG+V+ GRE+ V FA+
Sbjct: 76 QEPRGFGFVQYFDPDDAADAKYYMDGQVILGREVAVVFAQ 115
>gi|45198625|ref|NP_985654.1| AFR107Wp [Ashbya gossypii ATCC 10895]
gi|44984635|gb|AAS53478.1| AFR107Wp [Ashbya gossypii ATCC 10895]
gi|374108884|gb|AEY97790.1| FAFR107Wp [Ashbya gossypii FDAG1]
Length = 396
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
P +DT L + N++F D LF LF K+G V+ + IP + +GF +V+Y +
Sbjct: 263 PSQPSDT--LFLGNLSFNADRDALFELFSKHGNVISVRIPTHPESNQPKGFGYVQYGSVE 320
Query: 69 EAQKAVDRLDGRVVDGREITVQFA 92
EAQ A+D L G +D R + + F+
Sbjct: 321 EAQAALDALQGEYIDNRPVRIDFS 344
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V +++ + L FD G VV + +R T SRG+ +V ++ A+KAV
Sbjct: 168 TIFVGRLSWSVDDEWLKTEFDHIGGVVGARVIYERGTDKSRGYGYVDFEDVSYAEKAVKE 227
Query: 77 LDGRVVDGREITVQFAKYGP 96
+ G+ +DGR I + P
Sbjct: 228 MHGKEIDGRAINCDMSTSKP 247
>gi|282896319|ref|ZP_06304341.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
gi|281198815|gb|EFA73694.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
Length = 104
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+++ T +DL F KYG V + +P DR TG RGF FV E A+D
Sbjct: 2 SIYVGNLSYDVTLEDLKSAFSKYGNVSKVQLPTDRETGRPRGFGFVEMSNEAEENAAIDA 61
Query: 77 LDGRVVDGREITVQFAKYGPNAER 100
L+G+ GR++ V A+ P ER
Sbjct: 62 LNGKEFKGRQLKVNKAR--PREER 83
>gi|359479548|ref|XP_003632289.1| PREDICTED: cold-inducible RNA-binding protein-like [Vitis vinifera]
gi|296084877|emb|CBI28286.3| unnamed protein product [Vitis vinifera]
Length = 111
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V I+F TT L F ++G+VV+ I D+R +GFA+V + DEA+KA+
Sbjct: 35 TLFVKGISFSTTEKTLAEAFSQFGEVVEAKIIMDKRKLRPKGFAYVTFTREDEAEKALTE 94
Query: 77 LDGRVVDGREITVQFA 92
++G+VVDGR + V +A
Sbjct: 95 MNGKVVDGRTVLVDYA 110
>gi|213510736|ref|NP_001133148.1| cold inducible RNA binding protein [Salmo salar]
gi|197632151|gb|ACH70799.1| hyperosmotic glycine rich protein-like [Salmo salar]
gi|221219968|gb|ACM08645.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|221221054|gb|ACM09188.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 154
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
++D L V ++F TT L F KYG + + DR TG RGF FV+Y A++A+
Sbjct: 1 MSDEGKLFVGGLSFDTTEQSLAEAFSKYGNIAKCDVIMDRETGRPRGFGFVKYDNAEDAK 60
Query: 72 KAVDRLDGRVVDGREITVQFA 92
A++ ++G+ +DGR I V A
Sbjct: 61 DAMEGMNGQSLDGRTIRVNEA 81
>gi|221056270|ref|XP_002259273.1| RNA binding protein [Plasmodium knowlesi strain H]
gi|193809344|emb|CAQ40046.1| RNA binding protein, putative [Plasmodium knowlesi strain H]
Length = 946
Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLL+ N++F T+ D + +F +GKV D+++P D T RGF FV Y A++A+
Sbjct: 7 SLLIKNLSFHTSPDKIRKIFQSFGKVRDVYLPLDHYTRRPRGFGFVEYYEPQYAKEALIT 66
Query: 77 LDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDRSTGQ 116
L+ +DG E+ + A+ N + E + + R G+
Sbjct: 67 LNHTKIDGNEVKIIIAQ---NRRKSPETMKMYQRSVHKGR 103
>gi|209527224|ref|ZP_03275736.1| RNP-1 like RNA-binding protein [Arthrospira maxima CS-328]
gi|376003288|ref|ZP_09781101.1| Glycine-rich RNA-binding protein, rbp-like [Arthrospira sp. PCC
8005]
gi|209492382|gb|EDZ92725.1| RNP-1 like RNA-binding protein [Arthrospira maxima CS-328]
gi|375328318|emb|CCE16854.1| Glycine-rich RNA-binding protein, rbp-like [Arthrospira sp. PCC
8005]
Length = 93
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 44/77 (57%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+++ T DDL +F +YG V IP DR TG SRGF FV DE KA++
Sbjct: 2 SIYVGNLSYDVTPDDLSEVFAQYGTVKRSMIPTDRETGRSRGFGFVEMVNEDEETKAIEA 61
Query: 77 LDGRVVDGREITVQFAK 93
LDG GR + V A+
Sbjct: 62 LDGAEWMGRSLKVNKAR 78
>gi|348519627|ref|XP_003447331.1| PREDICTED: serine/arginine-rich splicing factor 10-like
[Oreochromis niloticus]
Length = 240
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 58/98 (59%), Gaps = 7/98 (7%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V NI+ + +DL F +YG +VD++IP D T RGFA+++++
Sbjct: 7 PPNT----SLFVRNISDESRPEDLRREFGRYGPIVDVYIPLDFYTRQPRGFAYIQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFA---KYGPNAERIKE 103
+A+ A+ LD + V GR+I +QFA + PN + KE
Sbjct: 63 DAEDALHSLDRKWVCGRQIEIQFAQGDRKTPNQMKSKE 100
>gi|255572355|ref|XP_002527116.1| mRNA splicing factor, putative [Ricinus communis]
gi|223533539|gb|EEF35279.1| mRNA splicing factor, putative [Ricinus communis]
Length = 509
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 18/158 (11%)
Query: 13 TDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+ + V NI + T + L + + G VV + DR TG +G+ F YK + A
Sbjct: 5 SQQRCVFVGNIPYDATEEQLIDICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALS 64
Query: 73 AVDRLDGRVVDGREITVQFAKYGPNAERIKE------GLLNHSRDRSTGQGVAVLGEDTE 126
A L G ++GR++ V FA+ NA+R +E GL N + G G A+LGE +
Sbjct: 65 ARRNLQGYEINGRQLRVDFAENDKNADRNREQGRGGPGLANIDPQKQIG-GPAILGESAQ 123
Query: 127 M--------ITEIEIIEGGVTVEAGIGTNVTDTVGGIE 156
IT ++ G + G+ T + + G++
Sbjct: 124 HQPIGLHIAITAATVMAGAL---GGVQTGMQSNLNGLQ 158
>gi|428166035|gb|EKX35018.1| translation initiation factor 3, subunit G [Guillardia theta
CCMP2712]
Length = 351
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 51/86 (59%)
Query: 8 GPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYA 67
G P + +L V N++ T +D+ LF ++G + + +P DR TG+ RGFAF+ +
Sbjct: 188 GGPQEEEKATLRVTNVSTDATREDMHELFKQFGPIARVSVPTDRATGEGRGFAFIDFYNR 247
Query: 68 DEAQKAVDRLDGRVVDGREITVQFAK 93
++AQ+A++ L+G D + V +A+
Sbjct: 248 EDAQRAINALNGTGFDSLILNVDWAR 273
>gi|348677474|gb|EGZ17291.1| hypothetical protein PHYSODRAFT_559962 [Phytophthora sojae]
Length = 330
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D+ +L V N++ T DDL LF +G V +++ +DR T SRGFAFV + Y ++A+KA
Sbjct: 216 DSATLRVTNVSPDTREDDLKELFRAFGPVSRVYLAKDRETFQSRGFAFVSFVYREDAEKA 275
Query: 74 VDRLDGRVVDGREITVQFAK 93
+++L G D + +++AK
Sbjct: 276 LNKLQGYGYDHLILKLEWAK 295
>gi|62897549|dbj|BAD96714.1| FUS interacting protein (serine-arginine rich) 1 isoform 2 variant
[Homo sapiens]
Length = 262
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 9/107 (8%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS + R PP+ SL V N+ T ++DL F +YG +VD+++P D T RGFA
Sbjct: 1 MSRYLR--PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFA 54
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFA---KYGPNAERIKEG 104
+V+++ +A+ A+ LD + + GR+I +QFA + PN + KEG
Sbjct: 55 YVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQIKAKEG 101
>gi|389741761|gb|EIM82949.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 145
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ V N+++ TT D L F ++G ++D + RDR TG SRGF FV + +EA A++ L
Sbjct: 5 VYVGNLSWNTTDDTLRQAFSEFGAILDSIVMRDRETGRSRGFGFVTFGTPEEADAAINNL 64
Query: 78 DGRVVDGREITVQFAK 93
+ + +DGR I V A
Sbjct: 65 NEQELDGRRIRVNLAN 80
>gi|357112219|ref|XP_003557907.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Brachypodium
distachyon]
Length = 219
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 49/77 (63%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ DDL F K+G++ DI++PRD T + RGF F++Y ++A A
Sbjct: 38 SLLVRNLRRDCRPDDLRRPFGKFGRLKDIYLPRDYYTQEPRGFGFIQYYDPEDAADAQYH 97
Query: 77 LDGRVVDGREITVQFAK 93
+DG+++ GRE+ V FA+
Sbjct: 98 MDGQILLGREVAVVFAE 114
>gi|396472554|ref|XP_003839148.1| hypothetical protein LEMA_P028210.1 [Leptosphaeria maculans JN3]
gi|312215717|emb|CBX95669.1| hypothetical protein LEMA_P028210.1 [Leptosphaeria maculans JN3]
Length = 379
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 8/105 (7%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L + N+ + TAD L +F ++G++ ++ I D R G SRGF +V +K +AQ A+D
Sbjct: 193 TLYIGNLYYEVTADQLQRVFSRFGEIENVKIIYDNR-GLSRGFGYVEFKNIPDAQTAIDN 251
Query: 77 LDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDRSTGQGVAVL 121
LD +V +GR + VQF R K G ++R ST L
Sbjct: 252 LDMQVFEGRNLVVQF-------HREKPGFGKNNRANSTNSPSKTL 289
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 4 FGRSGPPDITDTYS--LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAF 61
FG++ + T++ S L + N++F + DL LF + VVD+ + DRRTG RGFA
Sbjct: 273 FGKNNRANSTNSPSKTLFIGNMSFEMSDKDLNDLFREVRNVVDVRVAIDRRTGQPRGFAH 332
Query: 62 VRYKYADEAQKAVDRLDGRVVDGREITVQFA 92
+ A A + L +VV GRE+ + F+
Sbjct: 333 ADFLDIASATHAKNILANKVVYGRELRIDFS 363
>gi|71652518|ref|XP_814914.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70879928|gb|EAN93063.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 477
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
D +L + NI + +L LF YG+++ + R+ TG S G AFVRY +EA
Sbjct: 110 DNQSRTNLFISNIPHKMEQRELENLFAPYGQILSAAVMRNIHTGKSLGTAFVRYASTEEA 169
Query: 71 QKAVDRLDGRVVDGREITVQFAK----YGPNAERIKE 103
A+ + G+ + GR I VQ+AK Y P E K+
Sbjct: 170 MSAIKGMSGKRIGGRAIAVQWAKKQHDYAPVGEARKK 206
>gi|409076532|gb|EKM76903.1| hypothetical protein AGABI1DRAFT_115556 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 300
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 52/85 (61%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D +L V NI+ T +DL LF +G+V +++ RDR TG +GFAFV ++ AQKA
Sbjct: 215 DLPTLRVTNISEDTGENDLRELFGNFGRVARVYVGRDRETGAGKGFAFVSFEDRAVAQKA 274
Query: 74 VDRLDGRVVDGREITVQFAKYGPNA 98
++++ GR D + VQ+++ P+
Sbjct: 275 MEKVHGRGYDNLILNVQWSQPRPDG 299
>gi|302340505|ref|YP_003805711.1| RNP-1 like RNA-binding protein [Spirochaeta smaragdinae DSM
11293]
gi|301637690|gb|ADK83117.1| RNP-1 like RNA-binding protein [Spirochaeta smaragdinae DSM
11293]
Length = 88
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ V N+ + T + L LF +YG+V + I DR TG S+GF FV + D A+ A+ L
Sbjct: 5 IYVGNLNYSTREESLQDLFGQYGQVNSVNIITDRYTGQSKGFGFVEMEEMDAAEAAISAL 64
Query: 78 DGRVVDGREITVQFAK 93
DG +DGRE+ V AK
Sbjct: 65 DGTSLDGRELRVNEAK 80
>gi|298714689|emb|CBJ27614.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 473
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 5/107 (4%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D +L V +I T + LF LF K+G V+ I ++ TG SRGF FV Y D A+KA
Sbjct: 159 DGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKA 218
Query: 74 VDRLDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDRSTGQGVAV 120
+ +++G ++ + + VQ K ++ +E + R G GVA
Sbjct: 219 ISQMNGYQIEHKRLKVQHKK-----DKERERYVTAPSPRMMGPGVAA 260
>gi|390473557|ref|XP_003734621.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Callithrix
jacchus]
Length = 262
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 59/99 (59%), Gaps = 7/99 (7%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VD+++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVANDTRSEDLRREFGRYGPIVDVYVPPDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFA---KYGPNAERIKEG 104
+A+ A+ LD + + GR++ +QFA + PN + KEG
Sbjct: 63 DAEDALRNLDRKWICGRQMEIQFAQGDRKTPNQMKAKEG 101
>gi|427415488|ref|ZP_18905672.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
gi|425756163|gb|EKU97020.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
Length = 90
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+++ T +DL +F +YG V + +P DR TG RGFAFV E A++
Sbjct: 2 SIYVGNLSYDATNEDLTAVFAEYGTVKSVHLPTDRETGRMRGFAFVEMGAESEETAAIEA 61
Query: 77 LDGRVVDGREITVQFAKYGPNAER 100
LDG GR++ V AK P ER
Sbjct: 62 LDGAEWMGRDLKVNKAK--PREER 83
>gi|417404448|gb|JAA48976.1| Putative nucleolar protein fibrillarin nop77 rrm superfamily
[Desmodus rotundus]
Length = 763
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L++ N++F+ + DDL +F +YG V+++ IPR + G RGFAFV++K EA KA+ +
Sbjct: 116 LIIRNLSFKCSEDDLKTIFAQYGAVLEVNIPR-KPDGKMRGFAFVQFKNLLEAGKALKSM 174
Query: 78 DGRVVDGREITVQFA 92
+ + + GR I V +A
Sbjct: 175 NMKEIKGRTIAVDWA 189
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 6 RSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYG--KVVDIFIPRDRRTGDSRGFAFVR 63
R P D+ + ++ + N++F + +DL L ++G K V I + D T S+G AF +
Sbjct: 329 RKLPSDVNEGKTVFIRNLSFDSEEEDLGELLQQFGDLKYVRIVLHPD--TEHSKGCAFAQ 386
Query: 64 YKYADEAQKAVDRLD------GRVVDGREITVQFA 92
+ AQK + G +DGR++ V A
Sbjct: 387 FMTQGAAQKCLAAASPETEGGGLKLDGRQLKVDLA 421
>gi|367015628|ref|XP_003682313.1| hypothetical protein TDEL_0F02910 [Torulaspora delbrueckii]
gi|359749975|emb|CCE93102.1| hypothetical protein TDEL_0F02910 [Torulaspora delbrueckii]
Length = 436
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 49/81 (60%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L + N++F D+++ +F K+G++V + IP T +GF +V+Y D+A+KA+D
Sbjct: 289 TLFLGNLSFNADRDNIYEMFSKFGEIVSVRIPTHPETEQPKGFGYVQYGNVDDAKKALDA 348
Query: 77 LDGRVVDGREITVQFAKYGPN 97
L G +D R + + ++ PN
Sbjct: 349 LQGEYIDNRPVRLDYSTPRPN 369
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V +++ + L FD G VV + +R T SRG+ +V ++ A+KAV
Sbjct: 188 TIFVGRLSWSIDDEWLKNEFDHIGGVVSARVIYERGTDRSRGYGYVDFEDKSYAEKAVKE 247
Query: 77 LDGRVVDGREITVQFAKYGP 96
+ G+ +DGR I + P
Sbjct: 248 MHGKEIDGRPINCDLSTSKP 267
>gi|326497679|dbj|BAK05929.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 321
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N+ R D+L LF YG V+ + + RD TG SRG FV + EA+ A++ L
Sbjct: 130 LFVCNLPRRCGVDELLELFGPYGTVLSVEVSRDAETGISRGCGFVTMRSLAEARTAINAL 189
Query: 78 DGRVVDGREITVQFAKYGPNAERIKEGLLNHS 109
DG +DGRE+ V+ A + A R G L+H+
Sbjct: 190 DGFDLDGREMFVKLAAH-VIASRRNPGGLSHT 220
>gi|255580168|ref|XP_002530915.1| RNA binding protein, putative [Ricinus communis]
gi|223529509|gb|EEF31464.1| RNA binding protein, putative [Ricinus communis]
Length = 354
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 48/76 (63%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++ RTT + L F K+G+VV + DR +G S+GF FVRY ++A+K ++ +
Sbjct: 54 LFVSGLSKRTTTEGLKQAFSKFGEVVQARVVTDRVSGYSKGFGFVRYGSLEDAEKGIEGM 113
Query: 78 DGRVVDGREITVQFAK 93
DG+ +DG I ++A+
Sbjct: 114 DGKFLDGWVIFAEYAR 129
>gi|425772895|gb|EKV11275.1| hypothetical protein PDIG_51110 [Penicillium digitatum PHI26]
gi|425782122|gb|EKV20050.1| hypothetical protein PDIP_20330 [Penicillium digitatum Pd1]
Length = 835
Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 45/74 (60%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
I ++ L + N+ + TT DL P+F+++G + +I I D R+ S+GFA+V+Y AD A
Sbjct: 308 IRNSARLFLRNLAYDTTESDLQPIFERFGNIEEIHIAFDTRSTTSKGFAYVQYSLADAAI 367
Query: 72 KAVDRLDGRVVDGR 85
A LDG+ GR
Sbjct: 368 DAYRNLDGKHFQGR 381
Score = 45.1 bits (105), Expect = 0.033, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 15/111 (13%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFI-------PRDRRTGD- 55
F P D T +L V N+ F TT + +F + +D FI P +R G
Sbjct: 596 FAADEPDDSVATTTLFVKNLNFSTTNEKFLEVF----RSLDGFITGRIKTKPDPKRPGQT 651
Query: 56 -SRGFAFVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNA--ERIKE 103
S GFAF +K +AQ A+ ++G +D E+ ++ + G +A ER +E
Sbjct: 652 LSMGFAFADFKTKAQAQAALSAMNGYKLDQHELLIRASHKGKDAAEERRRE 702
Score = 44.3 bits (103), Expect = 0.052, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+++ N+ F+ T D+ LF YG++ + +P+ + +RGF F + A EA+ A+D L
Sbjct: 715 IIIKNLPFQATKKDIRSLFGAYGQLRSVRVPQ-KFDHTARGFGFADFVSAREAENAMDAL 773
Query: 78 DGRVVDGREITVQF 91
+ GR + ++F
Sbjct: 774 KNTHLLGRRLVLEF 787
Score = 38.9 bits (89), Expect = 2.3, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++LV N ++ T+ +L LFD YGK++ + +P S A V + DEAQKA
Sbjct: 496 AILVKNFSYGVTSAELRGLFDPYGKIIRLLMP------PSGTIAIVEFAQPDEAQKAFKG 549
Query: 77 LDGR 80
L R
Sbjct: 550 LAYR 553
>gi|384483751|gb|EIE75931.1| hypothetical protein RO3G_00635 [Rhizopus delemar RA 99-880]
Length = 831
Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 59/219 (26%), Positives = 95/219 (43%), Gaps = 34/219 (15%)
Query: 9 PPD-ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYA 67
P D I +T L + N+T+ T DDL +F+KYG + ++ +P + T S+G+A++ Y
Sbjct: 350 PKDLIAETGRLFIRNLTYACTEDDLKEVFEKYGTLSEVHMPIAKDTKKSKGYAYISYLLP 409
Query: 68 DEAQKAVDRLDGRVVDGREITV----------QFAKYGPNAERIK--EGLLNHSRDRSTG 115
+ A KA + LD + GR + + + GPN ++ + + DR
Sbjct: 410 EHALKAYEALDMKTFQGRLLHIIPGEEKPPTKEEELMGPNGTKLSSADAIAESIADRLGV 469
Query: 116 QGVAVLGED-TEMITEIEIIEGGVTVEA-------GIGTNVTDTVGGIEITVDEVEAEVP 167
VL D M + + E + E GI V DT G E +E
Sbjct: 470 SKSEVLNADANNMAVRLALAETQIVNETKEFFEKHGI---VLDTFGKKE------RSETI 520
Query: 168 VLIT--PEAVAEADMMIIAGVL--VDRLAVPPQLSIAPV 202
+L+ P E DM + G + R+ +PP +IA V
Sbjct: 521 ILVKNIPYGTTEEDMRELFGKYGELGRVLMPPAKTIAVV 559
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
+T L+V N+ F T DL LF YG++ + +P+ + TG RGFAF+ + EA+
Sbjct: 731 ETTKLVVRNVPFEATDKDLRELFGSYGQLKSLRMPK-KFTGGHRGFAFLDFLTKQEAKNV 789
Query: 74 VDRLDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDR 112
D + + GR + +++A+ G ++ E L+ SR R
Sbjct: 790 YDNMGNIHLYGRHLVLEWAQEG---DKASESSLDGSRKR 825
>gi|328791232|ref|XP_624611.3| PREDICTED: probable RNA-binding protein 19-like [Apis mellifera]
Length = 889
Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 49/82 (59%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
I ++ + + N+++ TT DD+ LF+KYG + ++ +P DR T +GF + + + A
Sbjct: 352 IAESGRMFIRNLSYTTTEDDIRKLFEKYGPLTEVNLPIDRITRKLKGFGTITFLMTEHAV 411
Query: 72 KAVDRLDGRVVDGREITVQFAK 93
KA LDG ++DGR + + AK
Sbjct: 412 KAYSELDGSILDGRMLHLLPAK 433
Score = 45.8 bits (107), Expect = 0.018, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTG--DSRGFAFVRYKYADEAQKAVD 75
+L+ N+ F+ TA+++ LF +G++ + +P+ + G RGFAFV Y EA+KA
Sbjct: 772 ILIRNVPFQATAEEITELFKAFGELKAVRLPK-KLVGVEKHRGFAFVEYYTKSEAKKAFK 830
Query: 76 RL-DGRVVDGREITVQFAKYGPNAERIKEGLLNH 108
L + GR + +++A+ E I++ H
Sbjct: 831 ALCQSTHLYGRRLVLEWAQTEEGVEDIRKRTAKH 864
Score = 45.1 bits (105), Expect = 0.036, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKV--VDIFIPRDRRTGDSR---GFAFVRYKYADEAQ 71
+L V NI F TT + L FDK G + V I + +D + ++ G+ FVRYK +A
Sbjct: 667 TLFVKNINFSTTDEQLKTYFDKCGPLHYVSIAMKKDPKNPGAKLSMGYGFVRYKRKADAD 726
Query: 72 KAVDRLDGRVVDGREITVQ 90
+A+ L V+DG+ + ++
Sbjct: 727 RALKVLQMTVLDGKTLELK 745
>gi|284929607|ref|YP_003422129.1| RRM domain-containing RNA-binding protein [cyanobacterium UCYN-A]
gi|284810051|gb|ADB95748.1| RRM domain-containing RNA-binding protein [cyanobacterium UCYN-A]
Length = 81
Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 46/77 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N++F T D+ +F +YG+V +++P DR TG RGF FV + ++ A+D+
Sbjct: 2 SIYVGNLSFEATEADVTNVFKEYGEVKKVYLPSDRETGKMRGFGFVEMETENQESAAIDK 61
Query: 77 LDGRVVDGREITVQFAK 93
L+G GR + V AK
Sbjct: 62 LNGSEWMGRILKVNKAK 78
>gi|221221302|gb|ACM09312.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 131
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
++D L V ++F TT L F KYG + + DR TG RGF FV+Y A++A+
Sbjct: 1 MSDEGKLFVGGLSFDTTEQSLAEAFSKYGNIAKCDVIMDRETGRPRGFGFVKYDNAEDAK 60
Query: 72 KAVDRLDGRVVDGREITVQFA 92
A++ ++G+ +DGR I V A
Sbjct: 61 DAMEGMNGQSLDGRTIRVNEA 81
>gi|145506438|ref|XP_001439180.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406363|emb|CAK71783.1| unnamed protein product [Paramecium tetraurelia]
Length = 386
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 6 RSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYK 65
++GPP +L V ++ DL LF YG V+ + D +TG S+GF FV +
Sbjct: 276 KTGPPGA----NLFVFHLPNEHKDSDLMDLFSSYGNVISARVMTDPKTGKSKGFGFVSFD 331
Query: 66 YADEAQKAVDRLDGRVVDGREITVQFAK 93
+ AQKA + +DG ++D ++++V F +
Sbjct: 332 KQESAQKAKEAMDGHLIDKKKLSVTFKQ 359
>gi|126654754|ref|ZP_01726288.1| RNA-binding region RNP-1 [Cyanothece sp. CCY0110]
gi|126623489|gb|EAZ94193.1| RNA-binding region RNP-1 [Cyanothece sp. CCY0110]
Length = 97
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+++ T +DL +F YG+V + IP DR TG RGFAFV D+ +KA+
Sbjct: 2 SIYVGNLSYDVTKEDLSEVFTDYGQVKRVHIPTDRDTGRMRGFAFVEMTSDDQEEKAIST 61
Query: 77 LDGRVVDGREITVQFAKYGPNAERIKEGLLN 107
LDG GR + V AK ER G N
Sbjct: 62 LDGAEWMGRTLKVNKAK-----ERQPRGSFN 87
>gi|449266970|gb|EMC77948.1| Transformer-2 like protein beta, partial [Columba livia]
Length = 156
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + D+ I D+++ SRGFAFV
Sbjct: 51 HIGNRANPD--PNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFV 108
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ ++A++A +R +G +DGR I V F+
Sbjct: 109 YFENVEDAKEAKERANGMELDGRRIRVDFS 138
>gi|345313668|ref|XP_001512332.2| PREDICTED: cold-inducible RNA-binding protein-like
[Ornithorhynchus anatinus]
Length = 270
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%)
Query: 13 TDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+D L V ++F T L +F KYG++ ++ + +DR T SRGF FV ++ D+A+
Sbjct: 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62
Query: 73 AVDRLDGRVVDGREITVQFA 92
A+ ++G+ VDGR+I V A
Sbjct: 63 AMMAMNGKSVDGRQIRVDQA 82
>gi|345008357|ref|YP_004810711.1| RNP-1 like RNA-binding protein [Streptomyces violaceusniger Tu
4113]
gi|344034706|gb|AEM80431.1| RNP-1 like RNA-binding protein [Streptomyces violaceusniger Tu
4113]
Length = 86
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 51/78 (65%), Gaps = 5/78 (6%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADE--AQKAVD 75
L V N++++TT DL LF ++G+V+D + DR +G SRGF FV DE A+KA+
Sbjct: 5 LHVGNLSYQTTTRDLATLFGQFGEVLDATVITDRESGRSRGFGFVEM---DETAAEKAMA 61
Query: 76 RLDGRVVDGREITVQFAK 93
+LDG +DGR +TV A+
Sbjct: 62 QLDGTEMDGRAVTVTEAR 79
>gi|426194777|gb|EKV44708.1| hypothetical protein AGABI2DRAFT_194634 [Agaricus bisporus var.
bisporus H97]
Length = 300
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 52/85 (61%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D +L V NI+ T +DL LF +G+V +++ RDR TG +GFAFV ++ AQKA
Sbjct: 215 DLPTLRVTNISEDTGENDLRELFGNFGRVARVYVGRDRETGAGKGFAFVSFEDRAVAQKA 274
Query: 74 VDRLDGRVVDGREITVQFAKYGPNA 98
++++ GR D + VQ+++ P+
Sbjct: 275 MEKVHGRGYDNLILNVQWSQPRPDG 299
>gi|70942643|ref|XP_741463.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56519859|emb|CAH77253.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 254
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 58/100 (58%), Gaps = 3/100 (3%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLL+ N++F T+ D + +F+ +GK+ D+++P D T RGF FV Y A++A++
Sbjct: 7 SLLIRNLSFETSPDKVRKIFEHFGKIRDVYLPLDHYTRRPRGFGFVEYYDPKHAKEALNI 66
Query: 77 LDGRVVDGREITV---QFAKYGPNAERIKEGLLNHSRDRS 113
L+ +DG+EI + Q + P+ + LN S+ RS
Sbjct: 67 LNNSKIDGKEIRIIVAQNRRKSPDTMKKYHNNLNESKYRS 106
>gi|434396627|ref|YP_007130631.1| RNP-1 like RNA-binding protein [Stanieria cyanosphaera PCC 7437]
gi|428267724|gb|AFZ33665.1| RNP-1 like RNA-binding protein [Stanieria cyanosphaera PCC 7437]
Length = 102
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 53/100 (53%), Gaps = 9/100 (9%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V NI + T +DL +F +YG V +++P DR TG RGF FV E +A++
Sbjct: 2 SIYVGNIPYEVTQEDLSSIFAEYGTVTRVYLPVDRETGRMRGFGFVEMSNETEEDQAIET 61
Query: 77 LDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDRSTGQ 116
LDG GRE+ V N R KE N++R+ S G
Sbjct: 62 LDGAEWMGRELRV-------NKARPKEN--NNNRNYSGGN 92
>gi|403357290|gb|EJY78271.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 109
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 51/85 (60%)
Query: 8 GPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYA 67
GP + Y+L V + +DL LF YG+V ++ + DRRTG +G+AF+ ++
Sbjct: 17 GPMKSVEGYTLCVSGLHGEVQEEDLQDLFGAYGQVRNLHLNLDRRTGYVKGYAFLEFEEL 76
Query: 68 DEAQKAVDRLDGRVVDGREITVQFA 92
A+K +D L+G+++ G++I V FA
Sbjct: 77 KTAKKVIDELNGKMLLGQQIKVDFA 101
>gi|15239958|ref|NP_196239.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
gi|9759319|dbj|BAB09686.1| unnamed protein product [Arabidopsis thaliana]
gi|17065276|gb|AAL32792.1| Unknown protein [Arabidopsis thaliana]
gi|20260002|gb|AAM13348.1| unknown protein [Arabidopsis thaliana]
gi|21593170|gb|AAM65119.1| unknown [Arabidopsis thaliana]
gi|332003601|gb|AED90984.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
Length = 146
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L + ++F TT L F K G+VV+ I DR + S+GF FV + ADEAQKA+
Sbjct: 36 LFIGGLSFCTTEQGLSEAFSKCGQVVEAQIVMDRVSDRSKGFGFVTFASADEAQKALMEF 95
Query: 78 DGRVVDGREITVQFAK 93
+G+ ++GR I V +AK
Sbjct: 96 NGQQLNGRTIFVDYAK 111
>gi|345313298|ref|XP_001514404.2| PREDICTED: transformer-2 protein homolog beta-like [Ornithorhynchus
anatinus]
Length = 478
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + D+ I D+++ SRGFAFV
Sbjct: 209 HVGNRANPDPN--CCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFV 266
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D+A++A +R +G +DGR I V F+
Sbjct: 267 YFENVDDAKEAKERANGMELDGRRIRVDFS 296
>gi|66362632|ref|XP_628282.1| splicing factor RRM domain containing protein; T22E16.120 SC35-like
splicing factor [Cryptosporidium parvum Iowa II]
gi|67590297|ref|XP_665474.1| dentin phosphoryn [Cryptosporidium hominis TU502]
gi|46229752|gb|EAK90570.1| splicing factor RRM domain containing protein; T22E16.120 SC35-like
splicing factor [Cryptosporidium parvum Iowa II]
gi|54656181|gb|EAL35244.1| dentin phosphoryn [Cryptosporidium hominis]
gi|323508677|dbj|BAJ77232.1| cgd7_940 [Cryptosporidium parvum]
gi|323510599|dbj|BAJ78193.1| cgd7_940 [Cryptosporidium parvum]
Length = 286
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 49/79 (62%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
D+++ SLLV N+ F T+ + F++YG V D+++P D T RGF FV Y +A
Sbjct: 85 DVSEGCSLLVRNLRFETSPGRVRHHFERYGPVRDVYLPLDYYTRRPRGFGFVEYMDPRDA 144
Query: 71 QKAVDRLDGRVVDGREITV 89
Q AV+RLDG ++DG I V
Sbjct: 145 QDAVNRLDGSLLDGSTIRV 163
>gi|406676693|ref|ZP_11083878.1| hypothetical protein HMPREF1170_02086 [Aeromonas veronii AMC35]
gi|423201900|ref|ZP_17188479.1| hypothetical protein HMPREF1167_02062 [Aeromonas veronii AER39]
gi|423207067|ref|ZP_17193623.1| hypothetical protein HMPREF1168_03258 [Aeromonas veronii AMC34]
gi|423209269|ref|ZP_17195823.1| hypothetical protein HMPREF1169_01341 [Aeromonas veronii AER397]
gi|404615847|gb|EKB12806.1| hypothetical protein HMPREF1167_02062 [Aeromonas veronii AER39]
gi|404617127|gb|EKB14063.1| hypothetical protein HMPREF1169_01341 [Aeromonas veronii AER397]
gi|404621360|gb|EKB18249.1| hypothetical protein HMPREF1168_03258 [Aeromonas veronii AMC34]
gi|404625007|gb|EKB21824.1| hypothetical protein HMPREF1170_02086 [Aeromonas veronii AMC35]
Length = 93
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKV--VDIFIPRDRRTGDSRGFAFVRYKYADEAQKAV 74
+ V N+++R TAD+L LF ++G+V VDI I RD TG S+GF F+ +A+KA+
Sbjct: 2 KIYVGNLSYRMTADELKTLFSQFGQVDKVDIIIDRD--TGQSKGFGFIEMPVNGDAEKAI 59
Query: 75 DRLDGRVVDGREITVQFAKYGPNAER 100
L G V GR ITV AK +A R
Sbjct: 60 AGLHGTEVGGRTITVNQAKPKTDAPR 85
>gi|159472653|ref|XP_001694459.1| glycine-rich RNA-binding protein [Chlamydomonas reinhardtii]
gi|158276683|gb|EDP02454.1| glycine-rich RNA-binding protein [Chlamydomonas reinhardtii]
Length = 165
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N+++ T ADDL LF K+G V D F+ DR TG SRGF FV + A+ A+ A
Sbjct: 5 LYVGNLSWDTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLE-ANAAKSACSEC 63
Query: 78 DGRVVDGREITVQFA 92
DG GR I V A
Sbjct: 64 DGTEFMGRTIRVNEA 78
>gi|195574505|ref|XP_002105229.1| GD21374 [Drosophila simulans]
gi|194201156|gb|EDX14732.1| GD21374 [Drosophila simulans]
Length = 2951
Score = 60.8 bits (146), Expect = 5e-07, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYA---DEAQKA- 73
L + + +RTT ++L F+K+G +VD+ + +D RT SRGF F+ Y ++ DEAQK+
Sbjct: 2619 LFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQKSR 2678
Query: 74 VDRLDGRVVDGREITVQFAKYGPNA-ERIKEGLLNHSRDRSTGQGVAVLGEDTEMITEIE 132
++DGRVV+ + + PNA +K+ + +D Q + ++ I +I
Sbjct: 2679 PHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQNFGNIVDIN 2738
Query: 133 II 134
I+
Sbjct: 2739 IV 2740
Score = 43.1 bits (100), Expect = 0.13, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 36 FDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAV----DRLDGRVVD 83
F +G +VDI I D+ TG RGFAFV + D K V +L+G++VD
Sbjct: 2728 FQNFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVD 2779
>gi|443477523|ref|ZP_21067364.1| RNP-1 like RNA-binding protein [Pseudanabaena biceps PCC 7429]
gi|443017338|gb|ELS31803.1| RNP-1 like RNA-binding protein [Pseudanabaena biceps PCC 7429]
Length = 111
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 43/77 (55%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+++ T D L P+F+ YGKV + P DR TG +RGFAFV E A+
Sbjct: 2 SIYVGNLSYEVTQDHLKPVFEDYGKVTRVHFPTDRETGRARGFAFVEMSQDAEEDAAITA 61
Query: 77 LDGRVVDGREITVQFAK 93
LDG GR + V AK
Sbjct: 62 LDGAEWMGRVLKVNKAK 78
>gi|255081268|ref|XP_002507856.1| predicted protein [Micromonas sp. RCC299]
gi|226523132|gb|ACO69114.1| predicted protein [Micromonas sp. RCC299]
Length = 292
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N++ T DL LF +G V I++ +R TG+SRGFAFV + D+AQ+A+++
Sbjct: 210 SVRVSNLSEDTREQDLQELFRPFGPVTRIYVAFNRETGESRGFAFVNFVNKDDAQRAINK 269
Query: 77 LDGRVVDGREITVQFAKYGPNAER 100
LDG D + V++A P ER
Sbjct: 270 LDGYGYDNLILRVEWA--APREER 291
>gi|194385818|dbj|BAG65284.1| unnamed protein product [Homo sapiens]
Length = 263
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%)
Query: 13 TDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+D L V ++F T L +F KYG++ ++ + +DR T SRGF FV ++ D+A+
Sbjct: 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62
Query: 73 AVDRLDGRVVDGREITVQFA 92
A+ ++G+ VDGR+I V A
Sbjct: 63 AMMAMNGKSVDGRQIRVDQA 82
>gi|427740185|ref|YP_007059729.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC
7116]
gi|427375226|gb|AFY59182.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC
7116]
Length = 95
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+++ T +DL +F +YG V + +P DR TG SRGF FV + DE A+
Sbjct: 2 SIYVGNLSYDVTQEDLSKVFAEYGSVKRVQLPTDRETGRSRGFGFVEMQSEDEESSAIQA 61
Query: 77 LDGRVVDGREITVQFAK 93
LDG GR + V A+
Sbjct: 62 LDGAEWMGRAMKVNKAR 78
>gi|242035621|ref|XP_002465205.1| hypothetical protein SORBIDRAFT_01g034120 [Sorghum bicolor]
gi|241919059|gb|EER92203.1| hypothetical protein SORBIDRAFT_01g034120 [Sorghum bicolor]
Length = 262
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 7 SGPPDITDTYS----------LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDS 56
SGPP D S + V N+++ L LF + G+V++ I DR +G S
Sbjct: 158 SGPPPPRDPSSQRGPRGDANRVYVGNLSWGVDNSALANLFSEQGEVLEARIVYDRESGRS 217
Query: 57 RGFAFVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGP 96
RGF FV Y A+E + A+ LDG +DGR+I V A+ P
Sbjct: 218 RGFGFVTYGSAEEVENAISNLDGSDLDGRQIRVTVAESKP 257
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 11/118 (9%)
Query: 8 GPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYA 67
G + ++ + V N+ F + L LF++ G V + + D+ TG SRGF FV
Sbjct: 75 GEEEFSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSV 134
Query: 68 DEAQKAVDRLDGRVVDGREITVQ---------FAKYGP--NAERIKEGLLNHSRDRST 114
E + AV++ +G V+DGR + V ++ GP +A R+ G L+ D S
Sbjct: 135 QEVEAAVEQFNGYVLDGRSLRVNSGPPPPRDPSSQRGPRGDANRVYVGNLSWGVDNSA 192
>gi|432896166|ref|XP_004076291.1| PREDICTED: uncharacterized protein LOC101157077 [Oryzias latipes]
Length = 515
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 4/107 (3%)
Query: 6 RSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYK 65
R+ PP+ T + V N++ +ADDL LF +G+V+D + R + G+AFV +
Sbjct: 75 RARPPNSTK---IFVGNLSATCSADDLHGLFSTFGRVLDCDKVKARLCSNV-GYAFVHME 130
Query: 66 YADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDR 112
+EAQ A+D L+G + GR++ V+ +K P ++ N S DR
Sbjct: 131 RKEEAQAAIDALNGTMFKGRQLAVELSKAQPLVNQMSGNSANSSGDR 177
>gi|428313428|ref|YP_007124405.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
gi|428255040|gb|AFZ20999.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
Length = 93
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N++++ T++DL +F +YG V + IP DR TG SRGF FV + E A+
Sbjct: 2 SIYVGNLSYQVTSEDLSSVFAEYGTVKRVQIPTDRETGRSRGFGFVEMETEAEEDAAIQE 61
Query: 77 LDGRVVDGREITVQFAKYGPNAERIKEGLLNHSR 110
LDG GR + V AK P ++ + G ++SR
Sbjct: 62 LDGAEWMGRSLKVNKAK--PREDQKRSG--SYSR 91
>gi|423196273|ref|ZP_17182856.1| hypothetical protein HMPREF1171_00888 [Aeromonas hydrophila SSU]
gi|404632497|gb|EKB29102.1| hypothetical protein HMPREF1171_00888 [Aeromonas hydrophila SSU]
Length = 92
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKV--VDIFIPRDRRTGDSRGFAFVRYKYADEAQKAV 74
+ V N+++R TAD+L +F ++G+V VDI I RD TG S+GF F+ EA+KA+
Sbjct: 2 KIYVGNLSYRMTADELKTVFSQFGQVDKVDIIIDRD--TGQSKGFGFIEMPVNGEAEKAI 59
Query: 75 DRLDGRVVDGREITVQFAKYGPNAER 100
L G + GR ITV AK +A R
Sbjct: 60 AGLHGTEIGGRTITVNQAKPKTDAPR 85
>gi|390468249|ref|XP_002753088.2| PREDICTED: probable RNA-binding protein 19 [Callithrix jacchus]
Length = 1066
Score = 60.8 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 46/79 (58%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
D+ ++ L V N+ + +T +DL LF KYG + ++ P D T +GFAFV + + + A
Sbjct: 503 DLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHA 562
Query: 71 QKAVDRLDGRVVDGREITV 89
KA +DG+V GR + V
Sbjct: 563 VKAYSEVDGQVFQGRMLHV 581
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGD---SRGFAFVRYKYADEAQKA 73
+L + N+ F TT + L +F K G V I + + S GF FV Y+ ++AQKA
Sbjct: 837 TLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGALLSMGFGFVEYRKPEQAQKA 896
Query: 74 VDRLDGRVVDGREITVQFAK 93
+ +L G +VDG ++ V+ ++
Sbjct: 897 LKQLQGHIVDGHKLEVRISE 916
Score = 40.4 bits (93), Expect = 0.83, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L+V N+ + LF +G + D + + + G R F F+ +K +EAQKA+
Sbjct: 110 LIVKNLPNGMKEERFRQLFAAFGTLTDCSL-KFTKDGKFRKFGFIGFKTEEEAQKALKHF 168
Query: 78 DGRVVDGREITVQFAK 93
+ +D ITV+F K
Sbjct: 169 NKSFIDTSRITVEFCK 184
>gi|425434850|ref|ZP_18815314.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
9432]
gi|389675574|emb|CCH95321.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
9432]
Length = 97
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 45/77 (58%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+++ + DDL +F YGKV + IP D+ TG RGFAFV + + KA++
Sbjct: 2 SIFVGNLSYEISQDDLVEVFQDYGKVQRVHIPVDKETGRKRGFAFVEMENKAQEAKAIEA 61
Query: 77 LDGRVVDGREITVQFAK 93
LDG GR I V A+
Sbjct: 62 LDGADWMGRSIKVNEAR 78
>gi|170098488|ref|XP_001880463.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644901|gb|EDR09150.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 154
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 45/76 (59%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ V N+++ TT D L F ++G+V+D + RDR TG SRGF FV + EA A+ L
Sbjct: 5 VYVGNLSWNTTDDTLRQAFSEFGQVLDSIVMRDRDTGRSRGFGFVTFSSGQEADAAIGGL 64
Query: 78 DGRVVDGREITVQFAK 93
+ + +DGR I V A
Sbjct: 65 NEQELDGRRIKVNLAN 80
>gi|402593936|gb|EJW87863.1| hypothetical protein WUBG_01225 [Wuchereria bancrofti]
Length = 103
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 54/89 (60%)
Query: 5 GRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRY 64
GR G + +L V + + DDL LF++ G V D++IP D T +SRGFA+V++
Sbjct: 3 GRRGSYRDDEIPTLYVRQVHYSARPDDLRALFEQMGPVRDVYIPLDYYTRESRGFAYVKF 62
Query: 65 KYADEAQKAVDRLDGRVVDGREITVQFAK 93
++ +A+ A+ L+G + GR I V++A+
Sbjct: 63 EFTRDAEDALRELNGTSILGRRIEVEWAE 91
>gi|357121831|ref|XP_003562621.1| PREDICTED: probable RNA-binding protein 19-like [Brachypodium
distachyon]
Length = 205
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL F ++G++ D++IPRD T + RGF FV+Y ++A A
Sbjct: 39 SLLVRNLRRDCRPEDLRRPFGQFGRLKDVYIPRDYYTREPRGFGFVQYFDPEDAADAKYY 98
Query: 77 LDGRVVDGREITVQFA---KYGPNAERIKEGLLNHSRDR 112
+DG+VV GREI V FA + P+ R +E S DR
Sbjct: 99 MDGQVVLGREIAVVFAQENRKHPSEMRTRESSRGRSYDR 137
>gi|332710459|ref|ZP_08430406.1| RRM domain RNA-binding protein [Moorea producens 3L]
gi|332350790|gb|EGJ30383.1| RRM domain RNA-binding protein [Moorea producens 3L]
Length = 93
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V N++++ T DDL +F YG V + +P DR TG RGFAFV +D+ A++
Sbjct: 2 TIYVGNLSYQATEDDLKTVFGDYGTVKRVVMPTDRETGKMRGFAFVEMTESDQEDSAIES 61
Query: 77 LDGRVVDGREITVQFAK 93
LDG GR I V A+
Sbjct: 62 LDGAEWMGRRIRVNKAR 78
>gi|209528246|ref|ZP_03276711.1| RNP-1 like RNA-binding protein [Arthrospira maxima CS-328]
gi|376004999|ref|ZP_09782569.1| Glycine-rich RNA-binding protein, rbp-like [Arthrospira sp. PCC
8005]
gi|423065550|ref|ZP_17054340.1| RNP-1 like RNA-binding protein [Arthrospira platensis C1]
gi|209491318|gb|EDZ91708.1| RNP-1 like RNA-binding protein [Arthrospira maxima CS-328]
gi|375326593|emb|CCE18322.1| Glycine-rich RNA-binding protein, rbp-like [Arthrospira sp. PCC
8005]
gi|406712993|gb|EKD08168.1| RNP-1 like RNA-binding protein [Arthrospira platensis C1]
Length = 100
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 44/77 (57%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+++ T +DL +F +YG V + +P DR TG RGF FV E Q A+D
Sbjct: 2 SIYVGNLSYEVTEEDLTAVFAEYGAVKRVKLPTDRETGRMRGFGFVEMDTEAEEQSAIDA 61
Query: 77 LDGRVVDGREITVQFAK 93
LDG GR++ V AK
Sbjct: 62 LDGAEWCGRDLRVNKAK 78
>gi|428203095|ref|YP_007081684.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
gi|427980527|gb|AFY78127.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
Length = 99
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+++ T +DL +F +YG V + +P DR TG RGFAFV E A++
Sbjct: 2 SIYVGNLSYEVTQEDLERVFKEYGTVNRVQMPTDRETGRPRGFAFVEMGTEAEETTAIEA 61
Query: 77 LDGRVVDGREITVQFAKYGPNAERIKEGLLNHSR 110
LDG GR++ V AK P ER G ++R
Sbjct: 62 LDGAQWMGRDLKVNKAK--PREERGSSGSWGNNR 93
>gi|253181|gb|AAB22809.1| NSR1=nucleolin homolog [Saccharomyces cerevisiae, Peptide, 249 aa]
Length = 249
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
P + +DT L + N++F D +F LF K+G+VV + IP T +GF +V++ +
Sbjct: 97 PSEPSDT--LFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNME 154
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYGPNAE 99
+A+KA+D L G +D R + + F+ PN +
Sbjct: 155 DAKKALDALQGEYIDNRPVRLDFSSPRPNND 185
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V +++ + L F+ G V+ + +R T SRG+ +V ++ A+KA+
Sbjct: 4 TIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQE 63
Query: 77 LDGRVVDGREITVQFAKYGP--NAERIKE 103
+ G+ +DGR I + P N +R K+
Sbjct: 64 MQGKEIDGRPINCDMSTSKPAGNNDRAKK 92
>gi|186682695|ref|YP_001865891.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
gi|186465147|gb|ACC80948.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
Length = 104
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 46/77 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N++++ T +DL F +YG V + +P DR TG RGFAFV + + Q A+D
Sbjct: 2 SIYVGNLSYQVTEEDLKQAFAEYGTVSRVQLPTDRETGRPRGFAFVEMESDTQEQAAIDA 61
Query: 77 LDGRVVDGREITVQFAK 93
LDG GR++ V AK
Sbjct: 62 LDGAEWMGRDLKVNKAK 78
>gi|7076789|emb|CAB75904.1| putative RNA binding protein [Arabidopsis thaliana]
Length = 309
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 66/125 (52%), Gaps = 10/125 (8%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LLV NI ++L F+++G V D++IPRD +G RGFAFV + A +A +A +
Sbjct: 49 LLVRNIPLDCRPEELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFVDAYDAGEAQRSM 108
Query: 78 DGRVVDGREITVQFA---KYGPNAERIKEGLLNH----SRDRSTGQGVAVLGE---DTEM 127
+ R GREITV A + P R+K + SRDRS + +L + D +
Sbjct: 109 NRRSFAGREITVVVASESRKRPEEMRVKTRTRSREPSGSRDRSHAKFTQILAQLDWDALV 168
Query: 128 ITEIE 132
T++E
Sbjct: 169 YTQLE 173
>gi|348510881|ref|XP_003442973.1| PREDICTED: transformer-2 protein homolog beta-like [Oreochromis
niloticus]
Length = 290
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 3 HFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFV 62
H G PD + L V ++ TT DL +F KYG + D+ I D+++ SRGFAFV
Sbjct: 109 HIGNRANPDPNNC--LGVFGLSLYTTERDLREVFSKYGPLADVNIVYDQQSRRSRGFAFV 166
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ +++++A +R +G +DGR I V F+
Sbjct: 167 YFENCEDSKEAKERANGMELDGRRIRVDFS 196
>gi|242080503|ref|XP_002445020.1| hypothetical protein SORBIDRAFT_07g002960 [Sorghum bicolor]
gi|241941370|gb|EES14515.1| hypothetical protein SORBIDRAFT_07g002960 [Sorghum bicolor]
Length = 140
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V ++ RTT + L F K+G+VV + DR +G S+GF FVRY +EA K ++
Sbjct: 36 NLFVSGLSKRTTTEGLRDAFAKFGEVVHARVVTDRVSGFSKGFGFVRYATTEEATKGIEG 95
Query: 77 LDGRVVDGREITVQFAK 93
+DG+ +DG I ++A+
Sbjct: 96 MDGKFLDGWVIFAEYAR 112
>gi|293336981|ref|NP_001169115.1| uncharacterized protein LOC100382959 [Zea mays]
gi|223975005|gb|ACN31690.1| unknown [Zea mays]
gi|414887554|tpg|DAA63568.1| TPA: hypothetical protein ZEAMMB73_633512 [Zea mays]
Length = 103
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 47/76 (61%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ V ++F TT ++ +F +G V + + RD +TG +GF FV+Y EA+KAV +
Sbjct: 23 IFVSRLSFYTTEEEFKDIFSPFGTVEEARLMRDHQTGRMKGFGFVKYSSQAEAEKAVKAM 82
Query: 78 DGRVVDGREITVQFAK 93
DG+++ GR I V+ AK
Sbjct: 83 DGKILRGRLIFVEMAK 98
>gi|41055454|ref|NP_956710.1| transformer-2 protein homolog alpha [Danio rerio]
gi|32451924|gb|AAH54632.1| Transformer-2 alpha [Danio rerio]
Length = 297
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 50/75 (66%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++ TT DL +F +YG + + + D+RTG SRGFAFV +++ D+A++A++R
Sbjct: 137 LGVFGLSLYTTERDLREVFSRYGSLAGVNVVYDQRTGRSRGFAFVYFEHIDDAKEAMERA 196
Query: 78 DGRVVDGREITVQFA 92
+G +DGR I V ++
Sbjct: 197 NGMELDGRRIRVDYS 211
>gi|390602556|gb|EIN11949.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 161
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ V N+++ TT + L F YG+++D + RDR TG SRGF FV + + EA A+ L
Sbjct: 5 VYVGNLSWNTTDESLRAAFSHYGQILDSIVMRDRDTGRSRGFGFVTFSSSAEADNAIASL 64
Query: 78 DGRVVDGREITVQFAK 93
+ + +DGR I V A
Sbjct: 65 NEQDLDGRRIRVNLAN 80
>gi|158516903|gb|ABW70168.1| putative glycine-rich RNA-binding protein 2 [Bambusa oldhamii]
Length = 162
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V +++ T L F +G+VV+ + DR TG SRGF FV + D+A+ A+ +
Sbjct: 39 LFVGGLSWGTDDQSLKDAFTSFGEVVEARVITDRDTGKSRGFGFVSFSNGDDAKNAMSSM 98
Query: 78 DGRVVDGREITVQFAKYGPNAER 100
DG+ ++GR I V FA P R
Sbjct: 99 DGQELEGRNIHVNFANERPAGNR 121
>gi|974605|gb|AAA75104.1| single-stranded nucleic acid binding protein [Triticum aestivum]
Length = 167
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%)
Query: 16 YSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVD 75
Y V + + T ++L F +YG+++D I DR TG SRGF FV + + ++A++
Sbjct: 6 YRCFVGGLAWATDDNNLQQAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMRQAIE 65
Query: 76 RLDGRVVDGREITVQFAK 93
++G+ +DGR ITV A+
Sbjct: 66 EMNGKELDGRNITVNEAQ 83
>gi|452820290|gb|EME27334.1| RNA-binding protein [Galdieria sulphuraria]
Length = 596
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 49/75 (65%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V +I F + DDL +F+ +G+V+ + + +D TG SRGF FV+YK ++A+KA ++L
Sbjct: 308 LYVGSIHFSISEDDLRTIFEPFGEVISLQLHKDPETGRSRGFGFVQYKNHEDAKKAFEQL 367
Query: 78 DGRVVDGREITVQFA 92
+G + GR + V A
Sbjct: 368 NGLDLAGRPLKVGLA 382
Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 10 PDIT-DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
PD D ++ V + + T D++ F GKV DI + D+R+G +G A+V + Y
Sbjct: 179 PDYERDLRTIFVWQLAQKVTEKDVYNFFSAAGKVRDIRMIIDKRSGRHKGAAYVEF-YYK 237
Query: 69 EAQKAVDRLDGRVVDGREITVQ 90
EA + RL G+ + G + ++
Sbjct: 238 EAIPSAMRLAGQQLCGYPVAIK 259
>gi|255941010|ref|XP_002561274.1| Pc16g09620 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585897|emb|CAP93632.1| Pc16g09620 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 835
Score = 60.8 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
I ++ L + N+ + TT DL P+F+++GK+ +I + D R+ S+GFA+V+Y AD A
Sbjct: 308 IRNSARLFLRNLAYDTTESDLQPIFERFGKIEEIHVAFDTRSTTSKGFAYVQYCDADAAV 367
Query: 72 KAVDRLDGRVVDGR 85
A LDG+ GR
Sbjct: 368 DAYQTLDGKHFQGR 381
Score = 44.7 bits (104), Expect = 0.045, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+++ N+ F+ T D+ LF YG++ + +P+ + +RGF F + A EA+ A+D L
Sbjct: 715 IIIKNLPFQATKKDIRSLFGAYGQLRSVRVPQ-KFDHSARGFGFADFVSAREAENAMDAL 773
Query: 78 DGRVVDGREITVQF 91
+ GR + ++F
Sbjct: 774 KNTHLLGRRLVLEF 787
Score = 38.9 bits (89), Expect = 2.0, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 6/57 (10%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
++LV N ++ T+ +L LFD YGK++ + +P S A V + DEAQKA
Sbjct: 496 AILVKNFSYGVTSAELRSLFDPYGKIIRLLMP------PSGTIAIVEFAQPDEAQKA 546
Score = 38.1 bits (87), Expect = 3.5, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 15/111 (13%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFI-------PRDRRTGD- 55
F P D T +L V N+ F TT + +F + +D FI P +R G
Sbjct: 596 FAADEPDDSVGTTTLFVKNLNFSTTNEKFLEVF----RPLDGFITGRIKTKPDPKRPGQT 651
Query: 56 -SRGFAFVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNA--ERIKE 103
S GFAF +K +AQ A+ ++G +D E+ V+ + G +A ER +E
Sbjct: 652 LSMGFAFADFKTKAQAQAALAAMNGYKLDQHELLVRASHKGKDAAEERRRE 702
>gi|148703339|gb|EDL35286.1| mCG1657 [Mus musculus]
Length = 288
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + D+ I D+++ SRGFAFV
Sbjct: 107 HVGNRANPDPN--CCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFV 164
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D+A++A +R +G +DGR I V F+
Sbjct: 165 YFENVDDAKEAKERANGMELDGRRIRVDFS 194
>gi|89272025|emb|CAJ83230.1| FUS interacting protein (serine/arginine-rich) 1 [Xenopus
(Silurana) tropicalis]
Length = 257
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 58/99 (58%), Gaps = 7/99 (7%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V NI ++DL F +YG +VD+++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNIADDIRSEDLRREFGRYGPIVDVYVPLDYYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFA---KYGPNAERIKEG 104
+A+ A+ LD + + GR+I +QFA + PN + KEG
Sbjct: 63 DAEDALHNLDKKWICGRQIEIQFAQGDRKTPNQMKAKEG 101
>gi|209735756|gb|ACI68747.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 81
Score = 60.8 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 46/72 (63%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
++D L V ++F TT + L F KYG + + + RD+ TG SRGF FV+Y A++A+
Sbjct: 1 MSDEGKLFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAK 60
Query: 72 KAVDRLDGRVVD 83
A++ ++G+ VD
Sbjct: 61 DALEGMNGKSVD 72
>gi|410952831|ref|XP_003983081.1| PREDICTED: RNA-binding protein 28-like, partial [Felis catus]
Length = 302
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L++ N++F+ + DDL +F +YG V+++ IPR + G RGFAFV++K EA KA+ +
Sbjct: 116 LIIRNLSFKCSEDDLRTVFAQYGAVLEVSIPR-KPDGKMRGFAFVQFKNLLEAGKALKSM 174
Query: 78 DGRVVDGREITVQFA 92
+ + + GR + V +A
Sbjct: 175 NMKEIKGRTVAVDWA 189
>gi|333999539|ref|YP_004532151.1| RNA-binding protein [Treponema primitia ZAS-2]
gi|333738431|gb|AEF83921.1| RNA-binding protein [Treponema primitia ZAS-2]
Length = 89
Score = 60.8 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 45/82 (54%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N+++ T D+L LF +YG V + I DR TG+S+GF FV +EAQ A+
Sbjct: 5 LYVGNLSYNTYEDNLRTLFSQYGTVESVKIITDRDTGNSKGFGFVEMSTEEEAQAAIRGT 64
Query: 78 DGRVVDGREITVQFAKYGPNAE 99
+ +DGR I V A P E
Sbjct: 65 NSTDLDGRSIKVNEAMDKPRRE 86
>gi|58331865|ref|NP_001011096.1| serine/arginine-rich splicing factor 10 [Xenopus (Silurana)
tropicalis]
gi|54038246|gb|AAH84490.1| FUS interacting protein (serine/arginine-rich) 1 [Xenopus
(Silurana) tropicalis]
Length = 258
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 58/99 (58%), Gaps = 7/99 (7%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V NI ++DL F +YG +VD+++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNIADDIRSEDLRREFGRYGPIVDVYVPLDYYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFA---KYGPNAERIKEG 104
+A+ A+ LD + + GR+I +QFA + PN + KEG
Sbjct: 63 DAEDALHNLDKKWICGRQIEIQFAQGDRKTPNQMKAKEG 101
>gi|348519914|ref|XP_003447474.1| PREDICTED: transformer-2 protein homolog beta-like [Oreochromis
niloticus]
Length = 279
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + D+ I D+++ SRGFAFV
Sbjct: 106 HIGNRANPDPN--CCLGVFGLSLYTTERDLRDVFSKYGPLEDVCIVYDQQSRRSRGFAFV 163
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D+A++A +R +G +DGR I V F+
Sbjct: 164 YFENTDDAKEAKERANGMELDGRRIRVDFS 193
>gi|296086246|emb|CBI31687.3| unnamed protein product [Vitis vinifera]
Length = 353
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV NI +DL F+++G V D+++P+D TG+ RGFAFV++ EA +A
Sbjct: 118 SLLVRNIPLNCRPEDLRVPFERFGLVRDVYLPKDYYTGEPRGFAFVQFVDPYEASEAQYH 177
Query: 77 LDGRVVDGREITV 89
++G++ GREI+V
Sbjct: 178 MNGQIFAGREISV 190
>gi|229367642|gb|ACQ58801.1| Cold-inducible RNA-binding protein [Anoplopoma fimbria]
Length = 179
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
++D L + ++F T + L F KYG + + + RDR T SRGF FV+Y A++A+
Sbjct: 1 MSDEGKLFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDRETEKSRGFGFVKYDNAEDAK 60
Query: 72 KAVDRLDGRVVDGREITVQFAKYGPNA 98
A+D ++G+ +DGR I V A G +
Sbjct: 61 DAMDGMNGQTLDGRTIRVDEAGKGGRS 87
>gi|444723044|gb|ELW63709.1| putative RNA-binding protein 19 [Tupaia chinensis]
Length = 1033
Score = 60.8 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 46/78 (58%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
+ D+ L V N+ + +T +DL LF KYG V ++ P D T +GFAFV + + + A
Sbjct: 500 LADSGRLFVRNLPYTSTEEDLEKLFSKYGPVSELHYPIDSLTKKPKGFAFVTFMFPEHAV 559
Query: 72 KAVDRLDGRVVDGREITV 89
KA ++DG+V GR + V
Sbjct: 560 KAYAQVDGQVFQGRMLHV 577
Score = 53.5 bits (127), Expect = 9e-05, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGD---SRGFAFVRYKYADEAQKA 73
+L + N+ F T + L +F K G V I R + S GF FV YK ++AQKA
Sbjct: 835 TLFIKNLNFDTAEETLRKVFSKVGMVKSCSISRKKNKAGALLSMGFGFVEYKKPEQAQKA 894
Query: 74 VDRLDGRVVDGREITVQFAK 93
+ +L G VVDG ++ V+ ++
Sbjct: 895 LKQLQGHVVDGHKLEVRISE 914
Score = 39.3 bits (90), Expect = 1.8, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L+V N+ + LF +G + D + + + G R F F+ +K +EAQ A++
Sbjct: 49 LIVKNLPNGMKEERFRQLFSTFGTLTDCSL-KFTKDGKFRKFGFIGFKSEEEAQTALNHF 107
Query: 78 DGRVVDGREITVQFAK 93
+ +D ITV+F K
Sbjct: 108 NKSFIDTSRITVEFCK 123
>gi|405117757|gb|AFR92532.1| transformer-2-beta isoform 3 [Cryptococcus neoformans var. grubii
H99]
Length = 214
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 47/75 (62%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++ RTT DL F ++GK+ I I D+RTG SRGFAF+ + ++A + +DRL
Sbjct: 43 LGVFGLSVRTTERDLQDEFSRHGKIEKIVIVYDQRTGRSRGFAFITMRSIEDATQCIDRL 102
Query: 78 DGRVVDGREITVQFA 92
+G + GR I V ++
Sbjct: 103 NGLTIHGRNIRVDYS 117
>gi|225427688|ref|XP_002274081.1| PREDICTED: uncharacterized protein LOC100257200 [Vitis vinifera]
Length = 972
Score = 60.8 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 46/80 (57%)
Query: 13 TDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
T + L+V N+ F+ ++ +F G V D FIP++ TG SRGFAFV++ +A+
Sbjct: 279 TQKWKLIVRNLPFKAKVTEIKDIFSSAGFVWDAFIPQNSETGLSRGFAFVKFTSKQDAEN 338
Query: 73 AVDRLDGRVVDGREITVQFA 92
A+ + +G + R I V +A
Sbjct: 339 AIQKFNGEKIGKRPIAVDWA 358
Score = 45.1 bits (105), Expect = 0.035, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 57/123 (46%), Gaps = 10/123 (8%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V N + T L F G + F+ + + + RGF FV++ ++A +A++
Sbjct: 20 TVFVSNFPYSFTNSQLEETFSDVGPIRRCFMVTQKGSTEHRGFGFVQFAVKEDANRAIEL 79
Query: 77 LDGRVVDGREITVQFAKYGPNAE--RIKEGLLNHSRDRSTGQGVAVLGEDTEMITEIEII 134
+G + GR+I V+ A + E R KE HS D ++ TE + E++
Sbjct: 80 KNGSSIGGRKIGVKLAMHRTPLEQRRSKENQAVHSDD--------IIKTRTEKDSSSEVV 131
Query: 135 EGG 137
+ G
Sbjct: 132 KQG 134
>gi|125536731|gb|EAY83219.1| hypothetical protein OsI_38428 [Oryza sativa Indica Group]
Length = 257
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V +++ T L F YG+V++ I DR TG SRGF F+ Y ++EA A+ L
Sbjct: 33 LFVGGLSYGTDEQSLRDTFANYGQVIEAKIINDRETGRSRGFGFITYASSEEASAAITAL 92
Query: 78 DGRVVDGREITVQFAK 93
DG+ +DGR I V A
Sbjct: 93 DGKDLDGRNIRVNTAN 108
>gi|432101161|gb|ELK29445.1| DAZ-associated protein 1 [Myotis davidii]
Length = 435
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 6/135 (4%)
Query: 5 GRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRY 64
G + PP T+ L V + + TT + L F +YG+VVD I +D+ T SRGF FV++
Sbjct: 28 GFAAPPVRAQTWKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKF 87
Query: 65 KYADEAQKAV----DRLDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDRSTGQGVAV 120
K + + LDGR +D + T + + P R KEG R+ ++
Sbjct: 88 KDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQ--PERTRPKEGWQKGPRNDNSKSNKIF 145
Query: 121 LGEDTEMITEIEIIE 135
+G E E+ E
Sbjct: 146 VGGIPHNCGETELRE 160
>gi|425459045|ref|ZP_18838531.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9808]
gi|389823285|emb|CCI28615.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9808]
Length = 97
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+++ + DDL +F YG V ++IP DR TG RGFAFV+ + D+ KA+
Sbjct: 2 SIFVGNLSYEISEDDLTDVFKDYGIVQRVYIPVDRDTGRKRGFAFVQMENKDQETKAIAA 61
Query: 77 LDGRVVDGREITVQFAK 93
LDG GR I V A+
Sbjct: 62 LDGAEWMGRSIKVNEAR 78
>gi|320591142|gb|EFX03581.1| polyadenylate-binding protein [Grosmannia clavigera kw1407]
Length = 780
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ + N+ T D+ LF++YG V I RD+ TG SRGF F+ + + A KAV+
Sbjct: 241 NIYIKNLHADVTDDEFRKLFEQYGAVTSSTIARDQETGKSRGFGFINFTTHESAAKAVEE 300
Query: 77 LDGRVVDGREITV 89
L+ R + G+E+ V
Sbjct: 301 LNSREIHGQELYV 313
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL V + T LF LF + G V I + RD T S G+A+V Y + +KA++
Sbjct: 60 SLYVGELDESVTEAMLFELFSQIGPVASIRVCRDAVTRRSLGYAYVNYNSTADGEKALEE 119
Query: 77 LDGRVVDGREITVQFAKYGPNAERIKEG 104
L+ ++ R + +++ P + +G
Sbjct: 120 LNYTLIKNRPCRIMWSQRDPALRKTGQG 147
>gi|198450175|ref|XP_002137048.1| GA26796 [Drosophila pseudoobscura pseudoobscura]
gi|198130926|gb|EDY67606.1| GA26796 [Drosophila pseudoobscura pseudoobscura]
Length = 368
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 48/71 (67%), Gaps = 4/71 (5%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYA---DEAQKA 73
L + + +RTT D+L F+K+G++VD+ + +D RT SRGF F+ Y ++ DEAQKA
Sbjct: 27 KLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSTMIDEAQKA 86
Query: 74 V-DRLDGRVVD 83
++DGRVV+
Sbjct: 87 RPHKIDGRVVE 97
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 32 LFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAV----DRLDGRVVD 83
L F +G +VDI I D+ TG RGFAFV + D K V +L+G++VD
Sbjct: 133 LRDYFQHFGSIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVD 188
>gi|323348433|gb|EGA82678.1| Nsr1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 254
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
P + +DT L + N++F D +F LF K+G+VV + IP T +GF +V++ +
Sbjct: 102 PSEPSDT--LFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNME 159
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYGPNAE 99
+A+KA+D L G +D R + + F+ PN +
Sbjct: 160 DAKKALDALQGEYIDNRPVRLDFSSPRPNND 190
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 18 LLVLNITFRTTADD--LFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVD 75
LL + + + DD L F+ G V+ + +R T SRG+ +V ++ A+KA+
Sbjct: 8 LLFSLVDYTWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQ 67
Query: 76 RLDGRVVDGREITVQFAKYGP--NAERIKE 103
+ G+ +DGR I + P N +R K+
Sbjct: 68 EMQGKEIDGRPINCDMSTSKPAGNNDRAKK 97
>gi|60098573|emb|CAH65117.1| hypothetical protein RCJMB04_3n1 [Gallus gallus]
Length = 621
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
++++ L V N+ F +T +DL +F KYG + +I P DR T +GFAF+ Y + A
Sbjct: 74 LSESGRLFVRNLPFTSTEEDLEKIFSKYGPLSEIHFPIDRLTKKPKGFAFITYMIPEHAV 133
Query: 72 KAVDRLDGRVVDGR 85
KA +DG+V GR
Sbjct: 134 KAYAEMDGQVFQGR 147
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDR-RTGD--SRGFAFVRYKYADEAQKA 73
+L + N+ F TT L F K G V I + + + G S GF FV YK + AQKA
Sbjct: 394 TLFIKNLNFTTTEGTLKETFSKVGAVKSCTISKKKDKAGTLLSMGFGFVEYKKPESAQKA 453
Query: 74 VDRLDGRVVDGREITVQFA 92
+ RL G +VDG ++ V+ +
Sbjct: 454 LRRLQGCIVDGHKLEVKIS 472
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Query: 15 TYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRR-TGDSRGFAFVRYKYADEAQKA 73
T +LV NI F+ T ++ LF +G++ + +P+ TG RGF FV + +A+KA
Sbjct: 494 TSKILVRNIPFQATVREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDFLTKQDAKKA 553
Query: 74 VDRL-DGRVVDGREITVQFAKYGPNAERIKEGLLNHSRD 111
+ L + GR + +++A E ++ +H D
Sbjct: 554 FNALCHSTHLYGRRLVLEWADTEETVEALRRRTADHFHD 592
>gi|449432785|ref|XP_004134179.1| PREDICTED: uncharacterized protein LOC101216537 [Cucumis sativus]
gi|449495419|ref|XP_004159835.1| PREDICTED: uncharacterized LOC101216537 [Cucumis sativus]
Length = 248
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 52/76 (68%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LLV N+ +DL F+++G V D+++P++ TG+ RGF FV++++A++A +A +L
Sbjct: 52 LLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAEAKQQL 111
Query: 78 DGRVVDGREITVQFAK 93
+ V+ GREI + FA+
Sbjct: 112 NHTVIGGREIRIVFAE 127
>gi|359482021|ref|XP_002276063.2| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Vitis vinifera]
gi|297740158|emb|CBI30340.3| unnamed protein product [Vitis vinifera]
Length = 133
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++F TT L F +YG+VV+ I DR + S+GF FV + +EAQKA +
Sbjct: 36 LFVGGLSFYTTEKGLSEHFSQYGQVVEAKIVMDRVSDRSKGFGFVTFASEEEAQKARTEM 95
Query: 78 DGRVVDGREITVQFAK 93
DG+ ++GR I V +AK
Sbjct: 96 DGKELNGRTIFVDYAK 111
>gi|212723388|ref|NP_001131976.1| Splicing factor, arginine/serine-rich 2 [Zea mays]
gi|194693082|gb|ACF80625.1| unknown [Zea mays]
gi|195620736|gb|ACG32198.1| splicing factor, arginine/serine-rich 2 [Zea mays]
gi|413955616|gb|AFW88265.1| Splicing factor, arginine/serine-rich 2 [Zea mays]
gi|448878236|gb|AGE46081.1| arginine/serine-rich splicing factor SCL25A transcript I [Zea mays]
Length = 216
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 61/107 (57%), Gaps = 5/107 (4%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ DDL F K+G V DI++P+D T + RGF F++Y ++A A
Sbjct: 40 SLLVRNLRRDCRPDDLRRPFGKFGPVKDIYLPKDYYTREPRGFGFIQYFDPEDASDAKYY 99
Query: 77 LDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDRSTGQGVAVLGE 123
+DG+++ GREI V FA+ E K+ +R++ +G+G + G
Sbjct: 100 MDGKMLLGREIAVVFAE-----ENRKKPSDMRAREKISGRGRSYDGR 141
>gi|195113003|ref|XP_002001061.1| GI10577 [Drosophila mojavensis]
gi|193917655|gb|EDW16522.1| GI10577 [Drosophila mojavensis]
Length = 359
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 48/71 (67%), Gaps = 4/71 (5%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYA---DEAQKA 73
L + + +RTT D+L F+K+G++VD+ + +D RT SRGF F+ Y ++ DEAQKA
Sbjct: 28 KLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSSMVDEAQKA 87
Query: 74 V-DRLDGRVVD 83
++DGRVV+
Sbjct: 88 RPHKIDGRVVE 98
Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 32 LFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAV----DRLDGRVVD 83
L F YG +VDI I D+ TG RGFAFV + D K V +L+G++VD
Sbjct: 134 LRDYFQHYGNIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVD 189
>gi|115474735|ref|NP_001060964.1| Os08g0139000 [Oryza sativa Japonica Group]
gi|38636774|dbj|BAD03017.1| putative RNA recognition motif (RRM)-containing protein [Oryza
sativa Japonica Group]
gi|113622933|dbj|BAF22878.1| Os08g0139000 [Oryza sativa Japonica Group]
gi|215767574|dbj|BAG99802.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222639884|gb|EEE68016.1| hypothetical protein OsJ_25986 [Oryza sativa Japonica Group]
Length = 141
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 48/77 (62%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L + ++ RTT D L F K+G+V+ + DR TG S+GF FVRY ++A K ++
Sbjct: 37 NLFISGLSKRTTTDGLKEAFAKFGEVIHARVVTDRVTGFSKGFGFVRYATVEDAAKGIEG 96
Query: 77 LDGRVVDGREITVQFAK 93
+DG+ +DG I ++A+
Sbjct: 97 MDGKFLDGWVIFAEYAR 113
>gi|356546384|ref|XP_003541606.1| PREDICTED: RNA-binding protein 28-like [Glycine max]
Length = 956
Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 48/80 (60%)
Query: 13 TDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
T + L++ N+ F+ +++ +F G V D+FIP+ TG S+GFAFV++ +A+K
Sbjct: 272 TQKWKLIIRNLPFKAKDNEIRDMFSSAGYVWDVFIPQKPDTGLSKGFAFVKFTCKQDAEK 331
Query: 73 AVDRLDGRVVDGREITVQFA 92
A+ +L+G R I V +A
Sbjct: 332 AIQKLNGSKFAKRLIAVDWA 351
Score = 45.1 bits (105), Expect = 0.036, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 43/83 (51%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V N+ + + L F + G V F+ + + RGF +V++ ++A +A++
Sbjct: 19 TLFVSNLPYSFSNSQLEETFSQVGPVRRCFMVTQKGSAQHRGFGYVQFAVEEDANRAIEL 78
Query: 77 LDGRVVDGREITVQFAKYGPNAE 99
+G V+GR+I V+ A P E
Sbjct: 79 KNGTSVEGRKIVVKHAMPRPPRE 101
>gi|158338654|ref|YP_001519831.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|359461822|ref|ZP_09250385.1| RNA-binding protein [Acaryochloris sp. CCMEE 5410]
gi|158308895|gb|ABW30512.1| RNA-binding protein [Acaryochloris marina MBIC11017]
Length = 86
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+++ + DD+ +F +YGKVV + +P DR TG RGF FV + E + A+
Sbjct: 2 SIYVGNLSYEASQDDVTAVFAEYGKVVKVHLPVDRETGRKRGFGFVDMENDSEEEAAIAD 61
Query: 77 LDGRVVDGREITVQFAK 93
LDG GR++ V A+
Sbjct: 62 LDGAEWMGRQLKVNKAR 78
>gi|294054726|ref|YP_003548384.1| RNP-1 like RNA-binding protein [Coraliomargarita akajimensis DSM
45221]
gi|293614059|gb|ADE54214.1| RNP-1 like RNA-binding protein [Coraliomargarita akajimensis DSM
45221]
Length = 147
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ V N++F T +DL LF +G V D+FI +DR +G RGFAFV + +E A++ L
Sbjct: 1 MYVGNLSFDATQEDLEGLFSAHGTVTDVFILKDRESGRPRGFAFVSMETPEEMNAAIEAL 60
Query: 78 DGRVVDGREITVQFAK 93
+G GR +T+ A+
Sbjct: 61 NGEEFMGRNLTINEAR 76
>gi|195391065|ref|XP_002054186.1| GJ22934 [Drosophila virilis]
gi|194152272|gb|EDW67706.1| GJ22934 [Drosophila virilis]
Length = 355
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 48/71 (67%), Gaps = 4/71 (5%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYA---DEAQKA 73
L + + +RTT D+L F+K+G++VD+ + +D RT SRGF F+ Y ++ DEAQKA
Sbjct: 28 KLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSSMVDEAQKA 87
Query: 74 V-DRLDGRVVD 83
++DGRVV+
Sbjct: 88 RPHKIDGRVVE 98
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 32 LFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAV----DRLDGRVVD 83
L F YG +VDI I D+ TG RGFAFV + D K V +L+G++VD
Sbjct: 134 LRDYFQHYGSIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVD 189
>gi|451849890|gb|EMD63193.1| hypothetical protein COCSADRAFT_38066 [Cochliobolus sativus ND90Pr]
Length = 326
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L + N+ + T D L +F ++G + I I D R G SRGFA+V YK +AQ A+D L
Sbjct: 138 LYIGNLYYEVTPDQLKRVFSRFGDIESIKIVYDNR-GLSRGFAYVEYKNVSDAQAAIDNL 196
Query: 78 DGRVVDGREITVQFA--KYGP 96
D +V +GR + VQF KY P
Sbjct: 197 DMQVFEGRNLVVQFHAPKYQP 217
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 8 GPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYA 67
PP T L + N++F + DL LF V+D+ + DRRTG RGFA +
Sbjct: 229 NPPSKT----LFIGNMSFEMSDKDLNDLFRDIRNVLDVRVAIDRRTGQPRGFAHADFIDV 284
Query: 68 DEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIK 102
A +A + L +V+ GR++ V F+K P +R K
Sbjct: 285 ASATRAREVLKEKVIYGRQLRVDFSKSSPQTQREK 319
>gi|428305437|ref|YP_007142262.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
gi|428246972|gb|AFZ12752.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
Length = 102
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 45/77 (58%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N++++ T +DL +F +YG V + +P DR TG RGF FV DE A+D
Sbjct: 2 SIYVGNLSYQVTEEDLTEVFAEYGTVKRVQLPTDRETGRMRGFGFVEMSTDDEETAAIDA 61
Query: 77 LDGRVVDGREITVQFAK 93
LDG GR++ V AK
Sbjct: 62 LDGAEWMGRDLKVNKAK 78
>gi|307106841|gb|EFN55086.1| hypothetical protein CHLNCDRAFT_24218 [Chlorella variabilis]
Length = 91
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D S+ V N++ T DDL LF +G + IF+ +DR TG+SRGFAF+ + + ++A +A
Sbjct: 6 DENSVRVSNLSEDVTEDDLADLFGPFGPIQRIFVAKDRETGESRGFAFINFIHREDALRA 65
Query: 74 VDRLDGRVVDGREITVQFAKYGPNAER 100
+ +LDG D ++V A P ER
Sbjct: 66 ISKLDGFGYDNLILSVSMA--APRPER 90
>gi|299739685|ref|XP_002910225.1| translation initiation factor eIF3g [Coprinopsis cinerea
okayama7#130]
gi|298403892|gb|EFI26731.1| translation initiation factor eIF3g [Coprinopsis cinerea
okayama7#130]
Length = 293
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 51/77 (66%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V NI+ T +DL LF +G+V +++ RDR TG +GFAFV ++ AQ+A+++
Sbjct: 211 TLRVTNISEDTAENDLRELFGVFGRVARVYVGRDRETGAGKGFAFVSFEDRAVAQRAMEK 270
Query: 77 LDGRVVDGREITVQFAK 93
++GR D ++VQ+++
Sbjct: 271 VNGRGYDNLILSVQWSQ 287
>gi|301755236|ref|XP_002913467.1| PREDICTED: RNA-binding protein 28-like [Ailuropoda melanoleuca]
gi|281348807|gb|EFB24391.1| hypothetical protein PANDA_001275 [Ailuropoda melanoleuca]
Length = 751
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L++ N++F+ + DDL +F +YG V+++ IPR + G RGFAFV++K EA KA+ +
Sbjct: 116 LIIRNLSFKCSEDDLKTVFAQYGAVLEVNIPR-KPDGKMRGFAFVQFKNLLEAGKALKSM 174
Query: 78 DGRVVDGREITVQFA 92
+ + + GR + V +A
Sbjct: 175 NMKEIKGRTVAVDWA 189
>gi|195055059|ref|XP_001994440.1| GH17116 [Drosophila grimshawi]
gi|193892203|gb|EDV91069.1| GH17116 [Drosophila grimshawi]
Length = 379
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 48/71 (67%), Gaps = 4/71 (5%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYA---DEAQKA 73
L + + +RTT D+L F+K+G++VD+ + +D RT SRGF F+ Y ++ DEAQKA
Sbjct: 28 KLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSSMVDEAQKA 87
Query: 74 V-DRLDGRVVD 83
++DGRVV+
Sbjct: 88 RPHKIDGRVVE 98
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 32 LFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAV----DRLDGRVVD 83
L F YG +VDI I D+ TG RGFAFV + D K V +L+G++VD
Sbjct: 134 LRDYFQHYGSIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVD 189
>gi|1934994|emb|CAA73034.1| SGRP-1 [Solanum commersonii]
Length = 162
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%)
Query: 16 YSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVD 75
YS V + + TT L F YG+VVD I DR TG SRGF FV +K ++A+
Sbjct: 7 YSCFVGGLAWATTDRTLSDAFSTYGEVVDSKIINDRETGRSRGFGFVTFKDEKSMKEAIS 66
Query: 76 RLDGRVVDGREITVQFAK 93
++G +DGR ITV A+
Sbjct: 67 GMNGSELDGRNITVNEAQ 84
>gi|375149693|ref|YP_005012134.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
gi|361063739|gb|AEW02731.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
Length = 112
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V N++F T DDL F +YG+V + D+ TG SRGF FV + A+KA+
Sbjct: 2 NIYVSNLSFNVTDDDLEGFFAEYGEVSSARVITDKFTGKSRGFGFVEMPNDEAAKKAITE 61
Query: 77 LDGRVVDGREITVQFAKYGPNAER 100
LDG V+GREI V A+ P ER
Sbjct: 62 LDGGRVEGREIKVAEAR--PREER 83
>gi|410343221|gb|JAA40557.1| cold inducible RNA binding protein [Pan troglodytes]
Length = 203
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Query: 13 TDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+D L V ++F T L +F KYG++ ++ + +DR T SRGF FV ++ D+A+
Sbjct: 34 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 93
Query: 73 AVDRLDGRVVDGREITV-QFAKYGPNAERIKEG 104
A+ ++G+ VDGR+I V Q K N R G
Sbjct: 94 AMMAMNGKSVDGRQIRVDQAGKSSDNRSRGYRG 126
>gi|291566709|dbj|BAI88981.1| RNA-binding protein [Arthrospira platensis NIES-39]
Length = 93
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+++ T DDL F +YG V IP DR TG SRGF FV DE + A++
Sbjct: 2 SIYVGNLSYDVTPDDLSAAFAEYGTVKRSMIPTDRETGRSRGFGFVEMSSEDEEKVAINA 61
Query: 77 LDGRVVDGREITVQFAKYGPNAERIKEGLLNH 108
LDG GR + V A+ P + G N
Sbjct: 62 LDGAEWKGRSLKVNKAR--PRDNNRQRGGFNR 91
>gi|195158385|ref|XP_002020072.1| GL13791 [Drosophila persimilis]
gi|194116841|gb|EDW38884.1| GL13791 [Drosophila persimilis]
Length = 431
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 53/86 (61%), Gaps = 4/86 (4%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYA---DEAQKA 73
L + + +RTT D+L F+K+G++VD+ + +D RT SRGF F+ Y ++ DEAQKA
Sbjct: 27 KLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSTMIDEAQKA 86
Query: 74 V-DRLDGRVVDGREITVQFAKYGPNA 98
++DGRVV+ + + PNA
Sbjct: 87 RPHKIDGRVVEPKRAVPRQDIDSPNA 112
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 32 LFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAV----DRLDGRVVD 83
L F +G +VDI I D+ TG RGFAFV + D K V +L+G++VD
Sbjct: 133 LRDYFQHFGSIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVD 188
>gi|90076360|dbj|BAE87860.1| unnamed protein product [Macaca fascicularis]
Length = 207
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Query: 13 TDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+D L V ++F T L +F KYG++ ++ + +DR T SRGF FV ++ D+A+
Sbjct: 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62
Query: 73 AVDRLDGRVVDGREITV-QFAKYGPNAERIKEG 104
A+ ++G+ VDGR+I V Q K N R G
Sbjct: 63 AMMAMNGKSVDGRQIRVDQAGKSSDNRSRGYRG 95
>gi|116624848|ref|YP_827004.1| RNP-1 like RNA-binding protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116228010|gb|ABJ86719.1| RNP-1 like RNA-binding protein [Candidatus Solibacter usitatus
Ellin6076]
Length = 97
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V N++F T D + LF+ +GKV + I DR +G RGF FV EA+KA+
Sbjct: 3 NIFVGNLSFGATEDTVRALFETHGKVDRVNICTDRDSGQPRGFGFVEMANDSEAEKAISA 62
Query: 77 LDGRVVDGREITVQFAKYGPNAER 100
++G+ +DGR + V A+ P AER
Sbjct: 63 VNGKELDGRALNVNEAR--PKAER 84
>gi|67923265|ref|ZP_00516750.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|67854891|gb|EAM50165.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
Length = 94
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+++ +DL +F +YG V + IP+DR +G RGFAFV D+ Q+A+
Sbjct: 2 SIYVGNLSYDVNKEDLEEVFTEYGSVKRVHIPKDRESGRMRGFAFVEMDSDDQEQEAIST 61
Query: 77 LDGRVVDGREITVQFAK 93
LDG GR + V AK
Sbjct: 62 LDGAEWMGRTLKVNKAK 78
>gi|406983427|gb|EKE04629.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 96
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
L + N+ F+T+ +DL L +YG+V + I +DR TG S+GF FV ++A+ ++
Sbjct: 2 KLFIGNLNFKTSEEDLMELLKEYGEVKSLQIIKDRDTGRSKGFGFVEMATKEQAESVMEN 61
Query: 77 LDGRVVDGREITVQFAK 93
L+G DG+ + V +AK
Sbjct: 62 LNGAEFDGKVLKVDYAK 78
>gi|317036295|ref|XP_001398046.2| C6 transcription factor [Aspergillus niger CBS 513.88]
Length = 1095
Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 52/85 (61%), Gaps = 3/85 (3%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
PP T ++ + N+ + T +DL +KYG V + + D R G S+G+ +V++ D
Sbjct: 905 PP--TPKETVFIGNVFYDVTREDLKKAMEKYGVVEKVVLVLDNR-GISKGYGYVQFDSID 961
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK 93
AQ+AVD L+ R+ +GR +TVQFA+
Sbjct: 962 AAQRAVDALNMRLFEGRRVTVQFAQ 986
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 43/79 (54%)
Query: 15 TYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAV 74
T +L + N+ F T DL LF VVDI + DRRTG +RGFA + A+ A+
Sbjct: 999 TRTLYIGNLPFEMTDRDLNELFKDVQNVVDIRVAVDRRTGQARGFAHAEFVSTSSAKAAM 1058
Query: 75 DRLDGRVVDGREITVQFAK 93
L+ ++ GR + + ++K
Sbjct: 1059 AILENKLPYGRRLRLDYSK 1077
>gi|297744765|emb|CBI38027.3| unnamed protein product [Vitis vinifera]
Length = 918
Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 46/80 (57%)
Query: 13 TDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
T + L+V N+ F+ ++ +F G V D FIP++ TG SRGFAFV++ +A+
Sbjct: 260 TQKWKLIVRNLPFKAKVTEIKDIFSSAGFVWDAFIPQNSETGLSRGFAFVKFTSKQDAEN 319
Query: 73 AVDRLDGRVVDGREITVQFA 92
A+ + +G + R I V +A
Sbjct: 320 AIQKFNGEKIGKRPIAVDWA 339
Score = 41.6 bits (96), Expect = 0.38, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 40/78 (51%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V N + T L F G + F+ + + + RGF FV++ ++A +A++
Sbjct: 20 TVFVSNFPYSFTNSQLEETFSDVGPIRRCFMVTQKGSTEHRGFGFVQFAVKEDANRAIEL 79
Query: 77 LDGRVVDGREITVQFAKY 94
+G + GR+I V+ A +
Sbjct: 80 KNGSSIGGRKIGVKLAMH 97
>gi|114051910|ref|NP_001039420.1| probable RNA-binding protein 19 [Bos taurus]
gi|88954099|gb|AAI14030.1| RNA binding motif protein 19 [Bos taurus]
Length = 920
Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 46/79 (58%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
D+ D+ L V N+ + ++ +DL LF +YG V ++ P D T +GFAFV + + + A
Sbjct: 358 DLADSGRLFVRNLPYTSSEEDLEKLFSRYGPVSELHYPIDSLTKKPKGFAFVTFMFPEHA 417
Query: 71 QKAVDRLDGRVVDGREITV 89
KA +DG+V GR + V
Sbjct: 418 VKAYAEVDGQVFQGRMLHV 436
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGD---SRGFAFVRYKYADEAQKA 73
+L + N+ F TT + L +F K G V I + + S GF FV Y+ ++AQKA
Sbjct: 691 TLFIKNLNFDTTEETLKGVFSKVGAVKSCSISKKKNKAGALLSMGFGFVEYRKPEQAQKA 750
Query: 74 VDRLDGRVVDGREITVQFAK 93
+ +L G VVDG ++ V+ ++
Sbjct: 751 LKQLQGHVVDGHKLEVRISE 770
Score = 38.9 bits (89), Expect = 2.1, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L+V N+ + LF +G + D + + + G R F F+ +K +EAQ A++
Sbjct: 4 LIVKNLPNGMKEERFRQLFTAFGTLTDCSL-KFTKDGKFRKFGFIGFKSEEEAQTALNHF 62
Query: 78 DGRVVDGREITVQFAK 93
+ +D ITV+F K
Sbjct: 63 NKSFIDTSRITVEFCK 78
>gi|73987338|ref|XP_868602.1| PREDICTED: cold-inducible RNA-binding protein isoform 4 [Canis
lupus familiaris]
Length = 219
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Query: 13 TDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+D L V ++F T L +F KYG++ ++ + +DR T SRGF FV ++ D+A+
Sbjct: 50 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 109
Query: 73 AVDRLDGRVVDGREITV-QFAKYGPNAERIKEG 104
A+ ++G+ VDGR+I V Q K N R G
Sbjct: 110 AMMAMNGKSVDGRQIRVDQAGKSSDNRSRGYRG 142
>gi|380818506|gb|AFE81126.1| putative RNA-binding protein 19 [Macaca mulatta]
gi|383412169|gb|AFH29298.1| putative RNA-binding protein 19 [Macaca mulatta]
Length = 960
Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 46/79 (58%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
D+ ++ L V N+ + +T +DL LF KYG + ++ P D T +GFAFV + + + A
Sbjct: 397 DLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHA 456
Query: 71 QKAVDRLDGRVVDGREITV 89
KA +DG+V GR + V
Sbjct: 457 VKAYSEVDGQVFQGRMLHV 475
Score = 53.5 bits (127), Expect = 8e-05, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDR-RTGD--SRGFAFVRYKYADEAQKA 73
+L + N+ F TT + L +F K G V I + + +TG S GF FV Y+ ++AQKA
Sbjct: 731 TLFIKNLNFDTTEEKLKGVFSKVGTVKSCSISKKKNKTGALLSMGFGFVEYRKPEQAQKA 790
Query: 74 VDRLDGRVVDGREITVQFAK 93
+ +L G +VDG ++ V+ ++
Sbjct: 791 LKQLQGHIVDGHKLEVRISE 810
Score = 40.0 bits (92), Expect = 1.0, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L+V N+ + LF +G + D + + + G R F F+ +K +EAQKA+
Sbjct: 4 LIVKNLPNGMKEERFRQLFAAFGTLTDCSL-KFTKDGKFRKFGFIGFKSEEEAQKALKHF 62
Query: 78 DGRVVDGREITVQFAK 93
+ +D ITV+F K
Sbjct: 63 NKSFIDTSRITVEFCK 78
>gi|355786561|gb|EHH66744.1| hypothetical protein EGM_03792 [Macaca fascicularis]
Length = 960
Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 46/79 (58%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
D+ ++ L V N+ + +T +DL LF KYG + ++ P D T +GFAFV + + + A
Sbjct: 397 DLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHA 456
Query: 71 QKAVDRLDGRVVDGREITV 89
KA +DG+V GR + V
Sbjct: 457 VKAYSEVDGQVFQGRMLHV 475
Score = 53.5 bits (127), Expect = 8e-05, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDR-RTGD--SRGFAFVRYKYADEAQKA 73
+L + N+ F TT + L +F K G V I + + +TG S GF FV Y+ ++AQKA
Sbjct: 731 TLFIKNLNFDTTEEKLKGVFSKVGTVKSCSISKKKNKTGALLSMGFGFVEYRKPEQAQKA 790
Query: 74 VDRLDGRVVDGREITVQFAK 93
+ +L G +VDG ++ V+ ++
Sbjct: 791 LKQLQGHIVDGHKLEVRISE 810
Score = 40.0 bits (92), Expect = 1.0, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L+V N+ + LF +G + D + + + G R F F+ +K +EAQKA+
Sbjct: 4 LIVKNLPNGMKEERFRQLFAAFGTLTDCSL-KFTKDGKFRKFGFIGFKSEEEAQKALKHF 62
Query: 78 DGRVVDGREITVQFAK 93
+ +D ITV+F K
Sbjct: 63 NKSFIDTSRITVEFCK 78
>gi|355564713|gb|EHH21213.1| hypothetical protein EGK_04225 [Macaca mulatta]
Length = 960
Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 46/79 (58%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
D+ ++ L V N+ + +T +DL LF KYG + ++ P D T +GFAFV + + + A
Sbjct: 397 DLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHA 456
Query: 71 QKAVDRLDGRVVDGREITV 89
KA +DG+V GR + V
Sbjct: 457 VKAYSEVDGQVFQGRMLHV 475
Score = 53.5 bits (127), Expect = 9e-05, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDR-RTGD--SRGFAFVRYKYADEAQKA 73
+L + N+ F TT + L +F K G V I + + +TG S GF FV Y+ ++AQKA
Sbjct: 731 TLFIKNLNFDTTEEKLKGVFSKVGTVKSCSISKKKNKTGALLSMGFGFVEYRKPEQAQKA 790
Query: 74 VDRLDGRVVDGREITVQFAK 93
+ +L G +VDG ++ V+ ++
Sbjct: 791 LKQLQGHIVDGHKLEVRISE 810
Score = 40.0 bits (92), Expect = 1.0, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L+V N+ + LF +G + D + + + G R F F+ +K +EAQKA+
Sbjct: 4 LIVKNLPNGMKEERFRQLFAAFGTLTDCSL-KFTKDGKFRKFGFIGFKSEEEAQKALKHF 62
Query: 78 DGRVVDGREITVQFAK 93
+ +D ITV+F K
Sbjct: 63 NKSFIDTSRITVEFCK 78
>gi|256070790|ref|XP_002571725.1| serine/arginine rich splicing factor [Schistosoma mansoni]
gi|360043151|emb|CCD78563.1| putative serine/arginine rich splicing factor [Schistosoma mansoni]
Length = 143
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Query: 6 RSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYK 65
+SGP + + L V N+ T +D+ F +YG + +I + DRRTG +G+A V Y+
Sbjct: 27 KSGPQRSVEGWILFVRNVQEEATEEDIRDKFCEYGDIKNIHLNLDRRTGYLKGYALVEYE 86
Query: 66 YADEAQKAVDRLDGRVVDGREITVQFA-KYGPN 97
EA A++ L+G ++G+ I V +A GPN
Sbjct: 87 NFKEAFTAMEHLNGSELNGQRILVDWAFTKGPN 119
>gi|403281594|ref|XP_003932266.1| PREDICTED: probable RNA-binding protein 19 [Saimiri boliviensis
boliviensis]
Length = 960
Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 46/79 (58%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
D+ ++ L V N+ + +T +DL LF KYG + ++ P D T +GFAFV + + + A
Sbjct: 397 DLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHA 456
Query: 71 QKAVDRLDGRVVDGREITV 89
KA +DG+V GR + V
Sbjct: 457 VKAYSEVDGQVFQGRMLHV 475
Score = 40.0 bits (92), Expect = 1.0, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L+V N+ + LF +G + D + + + G R F F+ +K +EAQKA+
Sbjct: 4 LIVKNLPNGMKEERFRQLFAAFGTLTDCSL-KFTKDGKFRKFGFIGFKTEEEAQKALKHF 62
Query: 78 DGRVVDGREITVQFAK 93
+ +D ITV+F K
Sbjct: 63 NKSFIDTSRITVEFCK 78
>gi|388858327|emb|CCF48115.1| related to glycine-rich RNA-binding protein [Ustilago hordei]
Length = 193
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 44/79 (55%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ V N+++ TT D L F YG++ D + +DR TG SRGF FV + EA A+ L
Sbjct: 5 VYVGNLSWNTTDDSLAHAFSAYGQLTDYIVMKDRETGRSRGFGFVTFATQGEADAAIAAL 64
Query: 78 DGRVVDGREITVQFAKYGP 96
+ + +DGR I V A P
Sbjct: 65 NEQELDGRRIRVNMANSRP 83
>gi|126660986|ref|ZP_01732073.1| RNA-binding region RNP-1 [Cyanothece sp. CCY0110]
gi|126617726|gb|EAZ88508.1| RNA-binding region RNP-1 [Cyanothece sp. CCY0110]
Length = 81
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 42/77 (54%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+ + T DL +F YG V + IP DR TG RGFAFV +E KA++
Sbjct: 2 SIYVGNLAYEVTDADLNTVFSDYGSVKRVHIPTDRETGRPRGFAFVEMNTEEEESKAIET 61
Query: 77 LDGRVVDGREITVQFAK 93
LDG GR + V A+
Sbjct: 62 LDGAEWMGRSMKVNQAR 78
>gi|428306262|ref|YP_007143087.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
gi|428247797|gb|AFZ13577.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
Length = 111
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N++++ T +D+ F +YG V + +P DR TG RGFAFV + E +KA++
Sbjct: 2 SIYVGNLSYQVTQEDISQTFAEYGTVKRVQLPTDRETGRMRGFAFVEMETDAEEEKAIEA 61
Query: 77 LDGRVVDGREITVQFAK 93
LDG GR++ V AK
Sbjct: 62 LDGAEWMGRDLKVNKAK 78
>gi|15219486|ref|NP_177494.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|11120799|gb|AAG30979.1|AC012396_15 RNA-binding glycine-rich protein, putative [Arabidopsis thaliana]
gi|62867629|gb|AAY17418.1| At1g73530 [Arabidopsis thaliana]
gi|114050615|gb|ABI49457.1| At1g73530 [Arabidopsis thaliana]
gi|332197351|gb|AEE35472.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 181
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 51/86 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
L V ++FRTT D L F+++G ++ + + D+ +GFAF+RY+ +EA KA+
Sbjct: 78 KLYVSGLSFRTTEDTLRDTFEQFGNLIHMNMVMDKVANRPKGFAFLRYETEEEAMKAIQG 137
Query: 77 LDGRVVDGREITVQFAKYGPNAERIK 102
+ G+ +DGR I V+ AK + R K
Sbjct: 138 MHGKFLDGRVIFVEEAKTRSDMSRAK 163
>gi|349578366|dbj|GAA23532.1| K7_Nsr1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 416
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
P + +DT L + N++F D +F LF K+G+VV + IP T +GF +V++ +
Sbjct: 264 PSEPSDT--LFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNME 321
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYGPN 97
+A+KA+D L G +D R + + F+ PN
Sbjct: 322 DAKKALDALQGEYIDNRPVRLDFSSPRPN 350
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V +++ + L F+ G V+ + +R T SRG+ +V ++ A+KA+
Sbjct: 171 TIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQE 230
Query: 77 LDGRVVDGREITVQFAKYGP--NAERIKE 103
+ G+ +DGR I + P N +R K+
Sbjct: 231 MQGKEIDGRPINCDMSTSKPAGNNDRAKK 259
>gi|6321599|ref|NP_011675.1| Nsr1p [Saccharomyces cerevisiae S288c]
gi|128576|sp|P27476.1|NSR1_YEAST RecName: Full=Nuclear localization sequence-binding protein;
AltName: Full=p67
gi|4058|emb|CAA40472.1| nuclear localization sequence binding protein [Saccharomyces
cerevisiae]
gi|1045265|emb|CAA59817.1| NSR1 [Saccharomyces cerevisiae]
gi|1323271|emb|CAA97173.1| NSR1 [Saccharomyces cerevisiae]
gi|285812350|tpg|DAA08250.1| TPA: Nsr1p [Saccharomyces cerevisiae S288c]
gi|392299413|gb|EIW10507.1| Nsr1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 414
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
P + +DT L + N++F D +F LF K+G+VV + IP T +GF +V++ +
Sbjct: 262 PSEPSDT--LFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNME 319
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYGPN 97
+A+KA+D L G +D R + + F+ PN
Sbjct: 320 DAKKALDALQGEYIDNRPVRLDFSSPRPN 348
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V +++ + L F+ G V+ + +R T SRG+ +V ++ A+KA+
Sbjct: 169 TIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQE 228
Query: 77 LDGRVVDGREITVQFAKYGP--NAERIKE 103
+ G+ +DGR I + P N +R K+
Sbjct: 229 MQGKEIDGRPINCDMSTSKPAGNNDRAKK 257
>gi|440906208|gb|ELR56498.1| Putative RNA-binding protein 19 [Bos grunniens mutus]
Length = 947
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 46/79 (58%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
D+ D+ L V N+ + ++ +DL LF +YG V ++ P D T +GFAFV + + + A
Sbjct: 400 DLADSGRLFVRNLPYTSSEEDLEKLFSRYGPVSELHYPIDSLTKKPKGFAFVTFMFPEHA 459
Query: 71 QKAVDRLDGRVVDGREITV 89
KA +DG+V GR + V
Sbjct: 460 VKAYAEVDGQVFQGRMLHV 478
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGD---SRGFAFVRYKYADEAQKA 73
+L + N+ F TT + L +F K G V I + + S GF FV Y+ ++AQKA
Sbjct: 718 TLFIKNLNFDTTEETLKGVFSKVGAVKSCSISKKKNKAGALLSMGFGFVEYRKPEQAQKA 777
Query: 74 VDRLDGRVVDGREITVQFAK 93
+ +L G VVDG ++ V+ ++
Sbjct: 778 LKQLQGHVVDGHKLEVRISE 797
Score = 38.9 bits (89), Expect = 2.2, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L+V N+ + LF +G + D + + + G R F F+ +K +EAQ A++
Sbjct: 4 LIVKNLPNGMKEERFRQLFTAFGTLTDCSL-KFTKDGKFRKFGFIGFKSEEEAQTALNHF 62
Query: 78 DGRVVDGREITVQFAK 93
+ +D ITV+F K
Sbjct: 63 NKSFIDTSRITVEFCK 78
>gi|296478475|tpg|DAA20590.1| TPA: RNA binding motif protein 19 [Bos taurus]
Length = 825
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 46/79 (58%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
D+ D+ L V N+ + ++ +DL LF +YG V ++ P D T +GFAFV + + + A
Sbjct: 358 DLADSGRLFVRNLPYTSSEEDLEKLFSRYGPVSELHYPIDSLTKKPKGFAFVTFMFPEHA 417
Query: 71 QKAVDRLDGRVVDGREITV 89
KA +DG+V GR + V
Sbjct: 418 VKAYAEVDGQVFQGRMLHV 436
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGD---SRGFAFVRYKYADEAQKA 73
+L + N+ F TT + L +F K G V I + + S GF FV Y+ ++AQKA
Sbjct: 691 TLFIKNLNFDTTEETLKGVFSKVGAVKSCSISKKKNKAGALLSMGFGFVEYRKPEQAQKA 750
Query: 74 VDRLDGRVVDGREITVQFAK 93
+ +L G VVDG ++ V+ ++
Sbjct: 751 LKQLQGHVVDGHKLEVRISE 770
Score = 38.9 bits (89), Expect = 2.2, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L+V N+ + LF +G + D + + + G R F F+ +K +EAQ A++
Sbjct: 4 LIVKNLPNGMKEERFRQLFTAFGTLTDCSL-KFTKDGKFRKFGFIGFKSEEEAQTALNHF 62
Query: 78 DGRVVDGREITVQFAK 93
+ +D ITV+F K
Sbjct: 63 NKSFIDTSRITVEFCK 78
>gi|442749963|gb|JAA67141.1| Putative rna-binding protein rrm superfamily [Ixodes ricinus]
Length = 863
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 45/74 (60%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
+ DT + V N+++ T DD+ LF K+G + ++ + D+ T +GFAFV + + + A
Sbjct: 320 LADTGRIFVRNLSYTVTEDDIEALFKKFGPISEVHLSIDKITRKPKGFAFVSFMFPEHAI 379
Query: 72 KAVDRLDGRVVDGR 85
KA LDG+++ GR
Sbjct: 380 KAFSELDGKLLQGR 393
Score = 45.1 bits (105), Expect = 0.037, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRR-TGDSRGFAFVRYKYADEAQK 72
++ +LV NI F T +L LF +G + DI +P+ TG RGFAFV + ++A++
Sbjct: 735 ESTKILVRNIPFEATKKELQELFSVFGTLRDIRLPKKMAGTGRHRGFAFVDFLTKNDAKR 794
Query: 73 AVDRL-DGRVVDGREITVQFA 92
A L + GR + +++A
Sbjct: 795 AFQALCQSTHLYGRRLVLEWA 815
>gi|432091266|gb|ELK24470.1| RNA-binding protein 28 [Myotis davidii]
Length = 762
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L++ N++F+ + DDL +F +YG V+++ IPR + G RGFAFV++K EA KA+ +
Sbjct: 116 LIIRNLSFKCSEDDLKTIFAQYGAVLEVNIPR-KPDGKMRGFAFVQFKNLLEAGKALKSM 174
Query: 78 DGRVVDGREITVQFA 92
+ + + GR + V +A
Sbjct: 175 NMKEIKGRTVAVDWA 189
>gi|449459926|ref|XP_004147697.1| PREDICTED: uncharacterized protein LOC101221788 [Cucumis sativus]
Length = 286
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV NI ++L F+++G V D++IP+D TG+ RGFAFV + EA +A
Sbjct: 52 SLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYH 111
Query: 77 LDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDRSTGQG 117
++G+ GREITV A + + E + SR +G G
Sbjct: 112 MNGKKFAGREITVVLAA---ESRKRPEQMRQRSRRGPSGYG 149
>gi|355715663|gb|AES05398.1| RNA binding motif protein 28 [Mustela putorius furo]
Length = 756
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L++ N++F+ + DDL +F +YG V+++ IPR + G RGFAFV++K EA KA+ +
Sbjct: 116 LIIRNLSFKCSEDDLKTVFAQYGAVLEVNIPR-KPDGKMRGFAFVQFKNLLEAGKALKSM 174
Query: 78 DGRVVDGREITVQFA 92
+ + + GR + V +A
Sbjct: 175 NMKEIKGRTVAVDWA 189
>gi|323452108|gb|EGB07983.1| hypothetical protein AURANDRAFT_71733 [Aureococcus anophagefferens]
Length = 702
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 48/83 (57%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
D D SL V NI+ T DL LF YG++ I++ +DR T SRGFAFV Y + +A
Sbjct: 578 DDRDQASLRVTNISEDTCEADLQVLFAPYGRIARIYLAKDRETMVSRGFAFVSYIHRQDA 637
Query: 71 QKAVDRLDGRVVDGREITVQFAK 93
++A+ L G D + +++AK
Sbjct: 638 ERAMAALQGHGYDHLILKIEWAK 660
>gi|363543257|ref|NP_001241843.1| uncharacterized protein LOC100857047 [Zea mays]
gi|238007748|gb|ACR34909.1| unknown [Zea mays]
gi|413916459|gb|AFW56391.1| putative glycine-rich protein [Zea mays]
Length = 261
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V +++ T L F KYG+V++ I DR +G SRGF F+ Y ++EA A+ +
Sbjct: 33 LFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTSSEEASAAITAM 92
Query: 78 DGRVVDGREITVQFAK 93
DG+ +DGR I V A
Sbjct: 93 DGKTLDGRNIRVNHAN 108
>gi|221132804|ref|XP_002167622.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Hydra
magnipapillata]
Length = 161
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 48/82 (58%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
+ D L + + + DL LF KYG VV + I +DR T RGFAFV + ++A+
Sbjct: 1 MGDAGKLYIGQLDYNADERDLEDLFGKYGTVVKVSIIKDRETQRPRGFAFVEFDSEEDAE 60
Query: 72 KAVDRLDGRVVDGREITVQFAK 93
A+D +G+ V+GR+ITV AK
Sbjct: 61 AAIDGCNGQDVNGRQITVARAK 82
>gi|109098882|ref|XP_001106082.1| PREDICTED: probable RNA-binding protein 19 [Macaca mulatta]
Length = 998
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 46/79 (58%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
D+ ++ L V N+ + +T +DL LF KYG + ++ P D T +GFAFV + + + A
Sbjct: 435 DLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHA 494
Query: 71 QKAVDRLDGRVVDGREITV 89
KA +DG+V GR + V
Sbjct: 495 VKAYSEVDGQVFQGRMLHV 513
Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDR-RTGD--SRGFAFVRYKYADEAQKA 73
+L + N+ F TT + L +F K G V I + + +TG S G FV Y+ ++AQKA
Sbjct: 769 TLFIKNLNFDTTEEKLKGVFSKVGTVKSCSISKKKNKTGALLSMGVGFVEYRKPEQAQKA 828
Query: 74 VDRLDGRVVDGREITVQFAK 93
+ +L G +VDG ++ V+ ++
Sbjct: 829 LKQLQGHIVDGHKLEVRISE 848
Score = 40.0 bits (92), Expect = 1.0, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L+V N+ + LF +G + D + + + G R F F+ +K +EAQKA+
Sbjct: 42 LIVKNLPNGMKEERFRQLFAAFGTLTDCSL-KFTKDGKFRKFGFIGFKSEEEAQKALKHF 100
Query: 78 DGRVVDGREITVQFAK 93
+ +D ITV+F K
Sbjct: 101 NKSFIDTSRITVEFCK 116
>gi|428768452|ref|YP_007160242.1| RNP-1 like RNA-binding protein [Cyanobacterium aponinum PCC
10605]
gi|428682731|gb|AFZ52198.1| RNP-1 like RNA-binding protein [Cyanobacterium aponinum PCC
10605]
Length = 101
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 46/77 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+ + T++DL +F +YG V + IP DR TG RGFAFV + ++ + A+D
Sbjct: 2 SIYVGNLPYEVTSEDLMEVFAEYGTVSRVHIPTDRETGRMRGFAFVEMENDNQEESAIDA 61
Query: 77 LDGRVVDGREITVQFAK 93
LDG RE+ V AK
Sbjct: 62 LDGAEWMKRELRVNKAK 78
>gi|417408391|gb|JAA50749.1| Putative translation initiation factor 3 subunit g eif-3g, partial
[Desmodus rotundus]
Length = 180
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 3 HFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + + + D+RTG SRGFAFV
Sbjct: 74 HTGSRANPDPNTC--LGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 131
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D++++A++R +G +DGR I V ++
Sbjct: 132 YFERIDDSKEAMERANGMELDGRRIRVDYS 161
>gi|355755275|gb|EHH59022.1| hypothetical protein EGM_09015 [Macaca fascicularis]
Length = 202
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Query: 13 TDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+D L V ++F T L +F KYG++ ++ + +DR T SRGF FV ++ D+A+
Sbjct: 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62
Query: 73 AVDRLDGRVVDGREITV-QFAKYGPNAERIKEG 104
A+ ++G+ VDGR+I V Q K N R G
Sbjct: 63 AMMAMNGKSVDGRQIRVDQAGKSSDNRSRGYRG 95
>gi|334349137|ref|XP_001369711.2| PREDICTED: transformer-2 protein homolog alpha-like [Monodelphis
domestica]
Length = 418
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 3 HFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + + + D+RTG SRGFAFV
Sbjct: 149 HTGSRANPDPNTC--LGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 206
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D++++A++R +G +DGR I V ++
Sbjct: 207 YFERIDDSKEAMERANGMELDGRRIRVDYS 236
>gi|113475531|ref|YP_721592.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
gi|110166579|gb|ABG51119.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
Length = 89
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+++ T +DL F KYG V + +P DR TG RGFAFV + DE A++
Sbjct: 2 SVYVGNLSYDATDEDLKTAFAKYGNVKRVQVPNDRETGRPRGFAFVEMESEDEETAAIEG 61
Query: 77 LDGRVVDGREITVQFAKYGPNAER 100
LDG + GR + V A+ P ER
Sbjct: 62 LDGSELMGRILKVNKAR--PREER 83
>gi|412993042|emb|CCO16575.1| predicted protein [Bathycoccus prasinos]
Length = 296
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N++ T DL LF +G V I++ +R TG+SRGFAFV + D+ Q+A+DR
Sbjct: 214 SVRVSNLSEDTREQDLQELFRPFGPVTRIYVAFNRETGESRGFAFVNFVNRDDGQRAIDR 273
Query: 77 LDGRVVDGREITVQFAKYGPNAER 100
LDG D + V+++ P ER
Sbjct: 274 LDGFGYDNLILRVEWS--APREER 295
>gi|294944087|ref|XP_002784080.1| RNA-binding domain protein, putative [Perkinsus marinus ATCC 50983]
gi|239897114|gb|EER15876.1| RNA-binding domain protein, putative [Perkinsus marinus ATCC 50983]
Length = 849
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 49/85 (57%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
+ DT LL++N+ + T DD+ F K+G + D+ + RD + SRG A+V Y + + A
Sbjct: 259 LMDTARLLLVNLPYIATEDDIKKAFQKFGSIEDVVVLRDEDSKKSRGMAYVTYLFPEHAV 318
Query: 72 KAVDRLDGRVVDGREITVQFAKYGP 96
+A + G+V GR + ++ A+ P
Sbjct: 319 RAKAEMHGKVFQGRVLRIKAAQARP 343
Score = 44.3 bits (103), Expect = 0.058, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 39/80 (48%)
Query: 15 TYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAV 74
T L V N+ F + D+ LF YG VV + +P RGFAFV + EA A+
Sbjct: 732 TNRLCVRNVAFEASRRDIRKLFSTYGNVVAVRMPLKVDRSGHRGFAFVEFVSRSEALAAM 791
Query: 75 DRLDGRVVDGREITVQFAKY 94
+ L + GR + ++ A +
Sbjct: 792 EALQHTHLYGRRLVLEPAAH 811
Score = 38.9 bits (89), Expect = 2.3, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSR----GFAFVRYKY 66
D + S+ V ++F TT + L F K + I R + D R GF FV +K
Sbjct: 621 DGAGSVSVFVKGLSFDTTEETLREHFKKQAGYIKCSISR-KTMPDGRQLSMGFGFVEFKN 679
Query: 67 ADEAQKAVDRLDGRVVDGREITVQ 90
A++ + RL G +DGR + +Q
Sbjct: 680 HKAAKECIKRLQGSSLDGRTLELQ 703
>gi|74152700|dbj|BAE42623.1| unnamed protein product [Mus musculus]
Length = 212
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 3 HFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + + + D+RTG SRGFAFV
Sbjct: 106 HTGSRANPDPNTC--LGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 163
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D++++A++R +G +DGR I V ++
Sbjct: 164 YFERIDDSKEAMERANGMELDGRRIRVDYS 193
>gi|357167535|ref|XP_003581210.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like
[Brachypodium distachyon]
Length = 137
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%)
Query: 15 TYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAV 74
T+ L + ++ T D L F +YG+V++ I D+ T S+GF FV++ +EA KA
Sbjct: 35 THKLFIGGLSQFATEDTLAEAFARYGQVLEATIVTDKMTNRSKGFGFVKFASEEEANKAR 94
Query: 75 DRLDGRVVDGREITVQFAK 93
D ++G+V++GR I V AK
Sbjct: 95 DEMNGKVLNGRVIYVDIAK 113
>gi|259146662|emb|CAY79919.1| Nsr1p [Saccharomyces cerevisiae EC1118]
Length = 414
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
P + +DT L + N++F D +F LF K+G+VV + IP T +GF +V++ +
Sbjct: 262 PSEPSDT--LFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNME 319
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYGPN 97
+A+KA+D L G +D R + + F+ PN
Sbjct: 320 DAKKALDALQGEYIDNRPVRLDFSSPRPN 348
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V +++ + L F+ G V+ + +R T SRG+ +V ++ A+KA+
Sbjct: 169 TIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQE 228
Query: 77 LDGRVVDGREITVQFAKYGP--NAERIKE 103
+ G+ +DGR I + P N +R K+
Sbjct: 229 MQGKEIDGRPINCDMSTSKPAGNNDRAKK 257
>gi|190406825|gb|EDV10092.1| nuclear localization sequence binding protein [Saccharomyces
cerevisiae RM11-1a]
gi|207345058|gb|EDZ72003.1| YGR159Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272028|gb|EEU07041.1| Nsr1p [Saccharomyces cerevisiae JAY291]
gi|323354844|gb|EGA86677.1| Nsr1p [Saccharomyces cerevisiae VL3]
gi|365765431|gb|EHN06939.1| Nsr1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 416
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
P + +DT L + N++F D +F LF K+G+VV + IP T +GF +V++ +
Sbjct: 264 PSEPSDT--LFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNME 321
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYGPN 97
+A+KA+D L G +D R + + F+ PN
Sbjct: 322 DAKKALDALQGEYIDNRPVRLDFSSPRPN 350
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V +++ + L F+ G V+ + +R T SRG+ +V ++ A+KA+
Sbjct: 171 TIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQE 230
Query: 77 LDGRVVDGREITVQFAKYGP--NAERIKE 103
+ G+ +DGR I + P N +R K+
Sbjct: 231 MQGKEIDGRPINCDMSTSKPAGNNDRAKK 259
>gi|151943436|gb|EDN61747.1| nuclear localization sequence binding protein [Saccharomyces
cerevisiae YJM789]
Length = 418
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
P + +DT L + N++F D +F LF K+G+VV + IP T +GF +V++ +
Sbjct: 266 PSEPSDT--LFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNME 323
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYGPN 97
+A+KA+D L G +D R + + F+ PN
Sbjct: 324 DAKKALDALQGEYIDNRPVRLDFSSPRPN 352
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V +++ + L F+ G V+ + +R T SRG+ +V ++ A+KA+
Sbjct: 173 TIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQE 232
Query: 77 LDGRVVDGREITVQFAKYGP--NAERIKE 103
+ G+ +DGR I + P N +R K+
Sbjct: 233 MQGKEIDGRPINCDMSTSKPAGNNDRAKK 261
>gi|319902685|ref|YP_004162413.1| RNP-1 like RNA-binding protein [Bacteroides helcogenes P 36-108]
gi|319417716|gb|ADV44827.1| RNP-1 like RNA-binding protein [Bacteroides helcogenes P 36-108]
Length = 102
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ + + F TT DL LF +YG+V + DR TG SRGFAFV + AQKA+D
Sbjct: 2 NIYIAGLNFSTTDADLNDLFSEYGEVSSARVITDRETGRSRGFAFVEMPDDEAAQKAIDE 61
Query: 77 LDGRVVDGREITVQFAKYGPNAER 100
L+G D + I+V A+ P ER
Sbjct: 62 LNGAEYDNKTISVNVAR--PREER 83
>gi|434389333|ref|YP_007099944.1| RRM domain-containing RNA-binding protein [Chamaesiphon minutus PCC
6605]
gi|428020323|gb|AFY96417.1| RRM domain-containing RNA-binding protein [Chamaesiphon minutus PCC
6605]
Length = 93
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+++ T DDL F +YGKV + +P DR TG RGFAFV + E A++
Sbjct: 2 SIYVGNLSYEVTQDDLTQTFAEYGKVKRVQLPTDRETGRLRGFAFVEMETDAEESAAIEA 61
Query: 77 LDGRVVDGREITVQFAKYGPNAER 100
LDG GR++ V AK P E+
Sbjct: 62 LDGAEWMGRDLKVNKAK--PREEK 83
>gi|115488680|ref|NP_001066827.1| Os12g0502200 [Oryza sativa Japonica Group]
gi|77555842|gb|ABA98638.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113649334|dbj|BAF29846.1| Os12g0502200 [Oryza sativa Japonica Group]
gi|125579440|gb|EAZ20586.1| hypothetical protein OsJ_36195 [Oryza sativa Japonica Group]
gi|215694288|dbj|BAG89281.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215708787|dbj|BAG94056.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 258
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V +++ T L F YG+V++ I DR TG SRGF F+ Y ++EA A+ L
Sbjct: 33 LFVGGLSYGTDEQSLRDTFANYGQVIEAKIINDRETGRSRGFGFITYASSEEASAAITAL 92
Query: 78 DGRVVDGREITVQFAK 93
DG+ +DGR I V A
Sbjct: 93 DGKDLDGRNIRVNTAN 108
>gi|384247695|gb|EIE21181.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 184
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 57/95 (60%), Gaps = 4/95 (4%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS GR + D SLLV N++ T DDL + +KYG++ D++IP+D +G+ RG
Sbjct: 3 MSRSGR----ERADGCSLLVRNLSRSVTLDDLRYVAEKYGRLRDVYIPKDYYSGEPRGIG 58
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
F+ + +A+ A+ LD +V+ G+E++V A G
Sbjct: 59 FLEFTDPRDAEDAIYGLDRKVIQGKEVSVVLALQG 93
>gi|355725838|gb|AES08680.1| transformer 2 beta-like protein [Mustela putorius furo]
Length = 297
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + D+ I D+++ SRGFAFV
Sbjct: 165 HVGNRANPDPN--CCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFV 222
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D+A++A +R +G +DGR I V F+
Sbjct: 223 YFENVDDAKEAKERANGMELDGRRIRVDFS 252
>gi|345860560|ref|ZP_08812871.1| RNA recognition motif family protein [Desulfosporosinus sp. OT]
gi|344326414|gb|EGW37881.1| RNA recognition motif family protein [Desulfosporosinus sp. OT]
Length = 83
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 15 TYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAV 74
T +L V N+ + TTAD+L F +YG+V I DR TG SRGF F+ + AD + AV
Sbjct: 2 TTTLYVGNLPWNTTADELGQFFSEYGQVESSRIITDRETGRSRGFGFIEVEEADAERMAV 61
Query: 75 DRLDGRVVDGREITVQFAK 93
+ L+G+ GR +TV AK
Sbjct: 62 E-LNGKDFGGRPLTVNEAK 79
>gi|395545949|ref|XP_003774858.1| PREDICTED: uncharacterized protein LOC100927808 [Sarcophilus
harrisii]
Length = 442
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + + I D+++ SRGFAFV
Sbjct: 279 HLGNRSNPDPN--CCLGVFGLSLYTTERDLRQIFTKYGPISHVSIVYDQQSRRSRGFAFV 336
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ +EA+KA +R+DG +DGR I V F+
Sbjct: 337 YFENVEEAKKAKERVDGIELDGRRIRVDFS 366
>gi|358372661|dbj|GAA89263.1| C6 transcription factor [Aspergillus kawachii IFO 4308]
Length = 1068
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 3/85 (3%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
PP T ++ + NI + T +DL +KYG V + + D R G S+G+ +V++ D
Sbjct: 878 PP--TPKETVFIGNIFYDVTREDLKKAMEKYGVVEKVVLVLDNR-GISKGYGYVQFDSID 934
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK 93
AQ+AVD L+ R+ +GR +TVQFA+
Sbjct: 935 AAQRAVDALNLRLFEGRRVTVQFAQ 959
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 43/79 (54%)
Query: 15 TYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAV 74
T +L + N+ F T DL LF VVDI + DRRTG +RGFA + A+ A+
Sbjct: 972 TRTLYIGNLPFEMTDRDLNELFKDVQNVVDIRVAVDRRTGQARGFAHAEFVSTSSAKAAM 1031
Query: 75 DRLDGRVVDGREITVQFAK 93
L+ ++ GR + + ++K
Sbjct: 1032 AVLENKLPYGRRLRLDYSK 1050
>gi|355702927|gb|EHH29418.1| hypothetical protein EGK_09841 [Macaca mulatta]
Length = 202
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Query: 13 TDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+D L V ++F T L +F KYG++ ++ + +DR T SRGF FV ++ D+A+
Sbjct: 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62
Query: 73 AVDRLDGRVVDGREITV-QFAKYGPNAERIKEG 104
A+ ++G+ VDGR+I V Q K N R G
Sbjct: 63 AMMAMNGKSVDGRQIRVDQAGKSSDNRSRGYRG 95
>gi|300176496|emb|CBK24161.2| unnamed protein product [Blastocystis hominis]
Length = 562
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 43/74 (58%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L + ++ T DL LF +GK+V I RDR+TG SRGF FV + D A A+ +
Sbjct: 301 NLFIYDVPLSFTESDLMSLFSPFGKIVSTKIYRDRKTGKSRGFGFVSFDNVDSADVAIQK 360
Query: 77 LDGRVVDGREITVQ 90
+DG ++ + + VQ
Sbjct: 361 MDGYEIESKVLQVQ 374
>gi|226532482|ref|NP_001150574.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|195640298|gb|ACG39617.1| glycine-rich RNA-binding protein 7 [Zea mays]
Length = 253
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V +++ T L F KYG+V++ I DR +G SRGF F+ Y ++EA A+ +
Sbjct: 36 LFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTSSEEASAAITAM 95
Query: 78 DGRVVDGREITVQFAK 93
DG+ +DGR I V A
Sbjct: 96 DGKTLDGRNIRVNHAN 111
>gi|380793113|gb|AFE68432.1| transformer-2 protein homolog alpha, partial [Macaca mulatta]
Length = 222
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 3 HFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + + + D+RTG SRGFAFV
Sbjct: 108 HTGSRANPDPNTC--LGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 165
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D++++A++R +G +DGR I V ++
Sbjct: 166 YFERIDDSKEAMERANGMELDGRRIRVDYS 195
>gi|260814928|ref|XP_002602165.1| hypothetical protein BRAFLDRAFT_268357 [Branchiostoma floridae]
gi|229287472|gb|EEN58177.1| hypothetical protein BRAFLDRAFT_268357 [Branchiostoma floridae]
Length = 224
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V N+ F T +DL +F+KYGKVV + + RD+ T S+G AFV + +EA V
Sbjct: 11 TVYVSNLPFALTNNDLHKIFEKYGKVVKVTVMRDKITRQSKGVAFVLFLKREEAHACVRA 70
Query: 77 LDGRVVDGREITVQFAK 93
L+G+V+ GR + AK
Sbjct: 71 LNGKVLFGRTVKCSMAK 87
>gi|399031232|ref|ZP_10731328.1| RRM domain-containing RNA-binding protein [Flavobacterium sp.
CF136]
gi|398070499|gb|EJL61796.1| RRM domain-containing RNA-binding protein [Flavobacterium sp.
CF136]
Length = 119
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V ++ F DL F+ YG V + I D+ TG S+GF FV DEAQKA+D
Sbjct: 2 NIFVGSLPFSIEEADLRESFEAYGAVDSVKIITDKFTGRSKGFGFVEMTNDDEAQKAIDE 61
Query: 77 LDGRVVDGREITVQFAKYGPNAERIKEGLLNHSR 110
L+G V GR I V ++ P ER N+SR
Sbjct: 62 LNGATVQGRAIVVNKSEPKPEGER--RSFNNNSR 93
>gi|381186866|ref|ZP_09894434.1| RNA-binding region RNP-1 [Flavobacterium frigoris PS1]
gi|379651172|gb|EIA09739.1| RNA-binding region RNP-1 [Flavobacterium frigoris PS1]
Length = 120
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V ++ F DL F+ YG V + I D+ TG S+GF FV DEAQKA+D
Sbjct: 2 NIFVGSLPFSIEEADLRESFEAYGAVDSVKIITDKFTGRSKGFGFVEMTNDDEAQKAIDE 61
Query: 77 LDGRVVDGREITVQFAKYGPNAERIKEGLLNHSR 110
L+G V GR I V ++ P ER N+SR
Sbjct: 62 LNGATVQGRAIVVNKSEPKPEGER--RSFNNNSR 93
>gi|221220658|gb|ACM08990.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|304376965|gb|ACI70202.2| Cold-inducible RNA-binding protein [Salmo salar]
Length = 161
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
++D L V ++F TT L F KYG + + DR TG RGF FV+Y ++A+
Sbjct: 1 MSDEGKLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAK 60
Query: 72 KAVDRLDGRVVDGREITVQFA 92
A+D ++G+ +DGR I V A
Sbjct: 61 DAMDAMNGQSLDGRTIRVNEA 81
>gi|198285593|gb|ACH85335.1| hyperosmotic glycine rich protein-like [Salmo salar]
gi|221219546|gb|ACM08434.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 160
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
++D L V ++F TT L F KYG + + DR TG RGF FV+Y ++A+
Sbjct: 1 MSDEGKLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAK 60
Query: 72 KAVDRLDGRVVDGREITVQFA 92
A+D ++G+ +DGR I V A
Sbjct: 61 DAMDAMNGQSLDGRTIRVNEA 81
>gi|383847362|ref|XP_003699323.1| PREDICTED: probable RNA-binding protein 19-like [Megachile
rotundata]
Length = 886
Score = 60.1 bits (144), Expect = 9e-07, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 45/74 (60%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
I ++ + V N+++ TT DD+ LF+KYG + ++ +P D+ T +GF + + + A
Sbjct: 346 IAESGRMFVRNLSYTTTEDDIRKLFEKYGPLTEVNLPIDKVTRKPKGFGTITFLMPEHAV 405
Query: 72 KAVDRLDGRVVDGR 85
KA LDG ++DGR
Sbjct: 406 KAYSELDGSILDGR 419
Score = 41.2 bits (95), Expect = 0.45, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 10 PDITDTYSLLVLNITFRTTADDLFPLFDKYGKV--VDIFIPRDRRTGD---SRGFAFVRY 64
PD T L V NI F TT + L F K G + I +D + S G+ FVRY
Sbjct: 661 PDTT----LFVKNINFATTEEQLHSYFSKCGPLSYASIATKKDVKNPGGKLSMGYGFVRY 716
Query: 65 KYADEAQKAVDRLDGRVVDGREITVQ 90
K +A +A+ L V+DG+ + ++
Sbjct: 717 KRKADADRALKVLQMTVLDGKTLELK 742
Score = 40.4 bits (93), Expect = 0.82, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTG--DSRGFAFVRYKYADEAQKAVD 75
+L+ N+ F+ ++ LF +G++ + +PR + G RGF FV Y EA+KA
Sbjct: 769 ILIRNVPFQANVHEITELFKAFGELKAVRLPR-KLVGVEKHRGFGFVEYYTKGEAKKAFK 827
Query: 76 RLDGRV-VDGREITVQFAKYGPNAERIKEGLLNH 108
L + GR + +++A+ E I++ H
Sbjct: 828 ALGQSTHLYGRRLVLEWAQTEEGIEDIRKRTAKH 861
>gi|354545488|emb|CCE42216.1| hypothetical protein CPAR2_807650 [Candida parapsilosis]
Length = 819
Score = 60.1 bits (144), Expect = 9e-07, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 45/74 (60%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
I +T L + NI++ T DD LF+KYG + ++ I D RTG S+GF ++++ ++A
Sbjct: 290 IEETGRLFIRNISYEATEDDFKHLFEKYGPLEEVHIAVDTRTGKSKGFVYIQFVNTEDAV 349
Query: 72 KAVDRLDGRVVDGR 85
A + LD ++ GR
Sbjct: 350 NAFEALDKQIFQGR 363
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 7 SGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKY 66
+ P + T +++ N+ F T+ D+ LF +G++ + +P+ + +RGFAFV +
Sbjct: 687 TAPSKSSKTSKIIIKNLPFETSRKDILELFGAFGQLKSVRVPK-KFDQSARGFAFVEFNL 745
Query: 67 ADEAQKAVDRLDGRVVDGREITVQFAK 93
E + A+ +L+G + GR + +Q+A+
Sbjct: 746 LKETENAMKQLEGVHLLGRRLVMQYAE 772
Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L+V + T D+L F + G V D+ + + + G+SR FAF+ YK D AQKAV
Sbjct: 4 LIVKGLPKYYTEDNLKKHFSQQGDVTDVKLVKSK-NGESRRFAFIGYKSDDAAQKAVKFF 62
Query: 78 DGRVVDGREITVQFAK 93
+ +D I VQ AK
Sbjct: 63 NKSFIDTSRIDVQLAK 78
Score = 43.1 bits (100), Expect = 0.13, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 15 TYSLLVLNITFRTTADDLFPLFDKYGKVVDIFI---PRDRRTGD--SRGFAFVRYKYADE 69
T S+ V N+ F TT L LF V + P + TG S GF FV +K +
Sbjct: 595 TVSVFVKNLNFSTTVQQLSDLFKPLHGFVLATVKTKPDPKNTGKTLSMGFGFVEFKSLAQ 654
Query: 70 AQKAVDRLDGRVVDGREITVQFA 92
A A+ LDG V+DG ++ ++ +
Sbjct: 655 ANAAIATLDGHVLDGHKLQLKIS 677
>gi|242078001|ref|XP_002443769.1| hypothetical protein SORBIDRAFT_07g001610 [Sorghum bicolor]
gi|241940119|gb|EES13264.1| hypothetical protein SORBIDRAFT_07g001610 [Sorghum bicolor]
Length = 308
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 44/76 (57%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N+ R DL LF +G V+ + I RD TG SRG AFV + EA+ A++ L
Sbjct: 125 LFVCNLPRRCDVQDLLQLFTPHGTVLSVEISRDAETGISRGTAFVTMRSLAEARTAINAL 184
Query: 78 DGRVVDGREITVQFAK 93
DG +DGRE+ V+ A
Sbjct: 185 DGFELDGREVFVKLAS 200
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 16 YSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVD 75
+ + V N+ + DL LF + G VV + DR+ G +R + F+ + A+E + A+
Sbjct: 226 HKVYVGNLAWSVQPQDLRELFTQCGTVVSTRLLTDRKGGRNRVYGFLSFSSAEELEAAL- 284
Query: 76 RLDGRVVDGREITVQFA 92
+LD V GR+I V+ A
Sbjct: 285 KLDRTVFFGRDIVVKEA 301
>gi|225451102|ref|XP_002265951.1| PREDICTED: uncharacterized protein LOC100262434 [Vitis vinifera]
gi|298205010|emb|CBI34317.3| unnamed protein product [Vitis vinifera]
Length = 287
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 49/75 (65%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LLV NI +DL F+++G V D+++P++ TG+ RGF FV+++ A++A +A L
Sbjct: 46 LLVRNIALDARPEDLRVPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRNAEDAAEAKHHL 105
Query: 78 DGRVVDGREITVQFA 92
+ V+ GREI + FA
Sbjct: 106 NHSVIGGREIAIVFA 120
>gi|224373359|ref|YP_002607731.1| RNA-binding protein [Nautilia profundicola AmH]
gi|223589280|gb|ACM93016.1| RNA-binding protein [Nautilia profundicola AmH]
Length = 84
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V NI ++ T DDL P+F +YG+V+ + I DR TG S+GF FV + A A++
Sbjct: 3 TIYVGNINYQATEDDLRPVFAEYGEVISVKIINDRETGRSKGFGFVEMESG--ADTAIEE 60
Query: 77 LDGRVVDGREITVQFAKYGPNAER 100
LDG+ GR + V A+ P A R
Sbjct: 61 LDGKDFQGRRLRVNEAR--PRAPR 82
>gi|225449547|ref|XP_002283722.1| PREDICTED: uncharacterized protein LOC100258210 [Vitis vinifera]
Length = 276
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV NI +DL F+++G V D+++P+D TG+ RGFAFV++ EA +A
Sbjct: 41 SLLVRNIPLNCRPEDLRVPFERFGLVRDVYLPKDYYTGEPRGFAFVQFVDPYEASEAQYH 100
Query: 77 LDGRVVDGREITV 89
++G++ GREI+V
Sbjct: 101 MNGQIFAGREISV 113
>gi|330689292|pdb|2RRA|A Chain A, Solution Structure Of Rna Binding Domain In Human Tra2
Beta Protein In Complex With Rna (Gaagaa)
Length = 99
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 48/75 (64%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++ TT DL +F KYG + D+ I D+++ SRGFAFV ++ D+A++A +R
Sbjct: 18 LGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERA 77
Query: 78 DGRVVDGREITVQFA 92
+G +DGR I V F+
Sbjct: 78 NGMELDGRRIRVDFS 92
>gi|345780008|ref|XP_532435.3| PREDICTED: RNA-binding protein 28 isoform 2 [Canis lupus
familiaris]
Length = 751
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L++ N++F+ + DDL +F +YG V+++ IPR + G RGFAFV++K EA KA+ +
Sbjct: 116 LIIRNLSFKCSEDDLKTVFGQYGAVLEVNIPR-KPDGKMRGFAFVQFKNLLEAGKALKSM 174
Query: 78 DGRVVDGREITVQFA 92
+ + + GR + V +A
Sbjct: 175 NMKEIKGRTVAVDWA 189
>gi|291404036|ref|XP_002718366.1| PREDICTED: FUS interacting protein (serine-arginine rich) 1
[Oryctolagus cuniculus]
Length = 182
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 9/107 (8%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS + R PP+ SL V N+ T ++DL F +YG +VD+++P D T RGFA
Sbjct: 1 MSRYLR--PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPIDFYTRRPRGFA 54
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFA---KYGPNAERIKEG 104
+V+++ +A+ A+ LD + + G +I +QFA + PN + KEG
Sbjct: 55 YVQFEDVRDAEDALHNLDRKWICGHQIEIQFAQGDRKTPNQMKAKEG 101
>gi|194043009|ref|XP_001928191.1| PREDICTED: probable RNA-binding protein 19 [Sus scrofa]
Length = 967
Score = 60.1 bits (144), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 46/79 (58%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
D+ D+ L V N+ + ++ +DL LF KYG + ++ P D T +GFAFV + + + A
Sbjct: 404 DLADSGRLFVRNLPYTSSEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHA 463
Query: 71 QKAVDRLDGRVVDGREITV 89
KA +DG+V GR + V
Sbjct: 464 VKAYAEVDGQVFQGRMLHV 482
Score = 57.0 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGD---SRGFAFVRYKYADEAQKA 73
+L + N+ F TT + L +F K G V I + + S GF FV YK ++AQKA
Sbjct: 738 TLFIKNLNFSTTEETLKGVFSKVGAVKSCSISKKKNKAGALLSMGFGFVEYKKPEQAQKA 797
Query: 74 VDRLDGRVVDGREITVQFA----KYGPNAERIKE 103
+ +L G VVDG ++ V+ + K P A R K+
Sbjct: 798 LKQLQGHVVDGHKLEVRISERATKPAPTATRKKQ 831
Score = 38.9 bits (89), Expect = 2.2, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L+V N+ + LF +G + D + + + G R F F+ +K +EAQ A++
Sbjct: 4 LIVKNLPNGMKEERFRQLFTAFGTLTDCSL-KFTKDGKFRKFGFIGFKSEEEAQTALNHF 62
Query: 78 DGRVVDGREITVQFAK 93
+ +D ITV+F K
Sbjct: 63 NKSFIDTSRITVEFCK 78
>gi|416401897|ref|ZP_11687293.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
gi|357261987|gb|EHJ11191.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
Length = 94
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+++ +DL +F +YG V + IP+DR +G RGFAFV D+ Q+A+
Sbjct: 2 SIYVGNLSYDVNKEDLEEVFTEYGSVKRVHIPKDRESGRVRGFAFVEMDSDDQEQEAIST 61
Query: 77 LDGRVVDGREITVQFAK 93
LDG GR + V AK
Sbjct: 62 LDGAEWMGRTLKVNKAK 78
>gi|315046346|ref|XP_003172548.1| hypothetical protein MGYG_05139 [Arthroderma gypseum CBS 118893]
gi|311342934|gb|EFR02137.1| hypothetical protein MGYG_05139 [Arthroderma gypseum CBS 118893]
Length = 304
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 10 PDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADE 69
PD ++ V NI F TA DL KYGKV+ I D R G SRGF +VR++ +E
Sbjct: 88 PDPEPKATIYVGNILFDITAADLKEFASKYGKVLGTRIIYDTR-GLSRGFGYVRFQSVEE 146
Query: 70 AQKAVDRLDGRVVDGREITVQFAK 93
A+KA+D + +GR+++V FA+
Sbjct: 147 AKKAIDEMHLSEYEGRKLSVNFAQ 170
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%)
Query: 15 TYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAV 74
T ++ V NI + T DL +FD V D+ + DRRTG RGF + + A
Sbjct: 185 TRTIFVGNIAHQITERDLHAIFDDIPNVFDVRVAVDRRTGMPRGFVHAEFTDVESAIAGF 244
Query: 75 DRLDGRVVDGREITVQFA 92
+ L G+ GR + + ++
Sbjct: 245 EILKGQAPYGRPLRLDYS 262
>gi|209734900|gb|ACI68319.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|303657347|gb|ADM15872.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 114
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
++D L V ++F TT L F KYG + + DR TG RGF FV+Y ++A+
Sbjct: 1 MSDEGKLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAK 60
Query: 72 KAVDRLDGRVVDGREITVQFA 92
A+D ++G+ +DGR I V A
Sbjct: 61 DAMDAMNGQSLDGRTIRVNEA 81
>gi|213513270|ref|NP_001133190.1| hyperosmotic glycine rich protein [Salmo salar]
gi|197632401|gb|ACH70924.1| hyperosmotic glycine rich protein [Salmo salar]
Length = 126
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
++D L V ++F TT L F KYG + + DR TG RGF FV+Y ++A+
Sbjct: 1 MSDEGKLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAK 60
Query: 72 KAVDRLDGRVVDGREITVQFA 92
A+D ++G+ +DGR I V A
Sbjct: 61 DAMDAMNGQSLDGRTIRVNEA 81
>gi|325191972|emb|CCA26441.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 248
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKY-GKVVDIFIPRDRRTGDSRGFAFVRYKYADE 69
+ T SLLV N+ +TT DDL F + G + D++IP+D T + R FAFV ++ A E
Sbjct: 138 ETTRPQSLLVRNLNPKTTGDDLRRAFSRRPGDIRDVYIPKDHSTNELRTFAFVEFRDARE 197
Query: 70 AQKAVDRLDGRVVDGREITVQFAK 93
A++ +D +DG EI V FA+
Sbjct: 198 AREVKYEMDRTTLDGNEIAVLFAQ 221
>gi|421976742|gb|AFX73254.1| glycine rich RNA binding protein 1a [Solanum lycopersicum]
Length = 164
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%)
Query: 16 YSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVD 75
YS V + + TT L F YG+VVD I DR TG SRGF FV +K + A+
Sbjct: 7 YSCFVGGLAWATTDRTLSDAFSTYGEVVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIS 66
Query: 76 RLDGRVVDGREITVQFAK 93
++G+ +DGR ITV A+
Sbjct: 67 GMNGQELDGRNITVNEAQ 84
>gi|297693058|ref|XP_002823848.1| PREDICTED: probable RNA-binding protein 19 [Pongo abelii]
Length = 999
Score = 60.1 bits (144), Expect = 9e-07, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 46/79 (58%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
D+ ++ L V N+ + +T +DL LF KYG + ++ P D T +GFAF+ + + + A
Sbjct: 436 DLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHA 495
Query: 71 QKAVDRLDGRVVDGREITV 89
KA +DG+V GR + V
Sbjct: 496 VKAYSEVDGQVFQGRMLHV 514
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGD---SRGFAFVRYKYADEAQKA 73
+L + N+ F TT + L +F K G V I + + S GF FV Y+ ++AQKA
Sbjct: 770 TLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGALLSMGFGFVEYRKPEQAQKA 829
Query: 74 VDRLDGRVVDGREITVQFAK 93
+ +L G +VDG ++ V+ ++
Sbjct: 830 LKQLQGHIVDGHKLEVRISE 849
Score = 40.0 bits (92), Expect = 0.96, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L+V N+ + LF +G + D + + + G R F F+ +K +EAQKA+
Sbjct: 42 LIVKNLPNGMKEERFRQLFAAFGTLTDCSL-KFTKDGKFRKFGFIGFKSEEEAQKALKHF 100
Query: 78 DGRVVDGREITVQFAK 93
+ +D ITV+F K
Sbjct: 101 NKSFIDTSRITVEFCK 116
>gi|56269656|gb|AAH86795.1| Sfrs10 protein [Mus musculus]
Length = 229
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + D+ I D+++ SRGFAFV
Sbjct: 107 HVGNRANPDPN--CCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFV 164
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D+A++A +R +G +DGR I V F+
Sbjct: 165 YFENVDDAKEAKERANGMELDGRRIRVDFS 194
>gi|329960883|ref|ZP_08299162.1| hypothetical protein HMPREF9446_00723 [Bacteroides fluxus YIT
12057]
gi|328532169|gb|EGF58973.1| hypothetical protein HMPREF9446_00723 [Bacteroides fluxus YIT
12057]
Length = 101
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ + + F TT DL LF +YG+V + DR TG SRGF FV AQKA+D
Sbjct: 2 NIYIAGLNFSTTDADLNDLFSEYGEVSSARVITDRETGRSRGFGFVEMSDDTAAQKAIDE 61
Query: 77 LDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDRSTG 115
L+G D + I+V A+ P ER + G +RDR G
Sbjct: 62 LNGAEYDQKTISVNVAR--PREERPRNG---GNRDRRGG 95
>gi|330689294|pdb|2RRB|A Chain A, Refinement Of Rna Binding Domain In Human Tra2 Beta
Protein
Length = 96
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
L V ++ TT DL +F KYG + D+ I D+++ SRGFAFV ++ D+A++A +R
Sbjct: 14 CLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKER 73
Query: 77 LDGRVVDGREITVQFA 92
+G +DGR I V F+
Sbjct: 74 ANGMELDGRRIRVDFS 89
>gi|226510663|gb|ACO59906.1| eukaryotic translation initiation factor 3 subunit G [Penaeus
monodon]
Length = 292
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 6/93 (6%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS GR +T ++ V N++ T DL LF +G + IF+ +D+ TG S+GFA
Sbjct: 201 MSSRGRD------ETATVRVTNLSENTREQDLQDLFRPFGDISRIFLAKDKNTGQSKGFA 254
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAK 93
F+ +K ++A KA+ L+G D ++V++AK
Sbjct: 255 FINFKRREDAAKAIQVLNGYGYDHLILSVEWAK 287
>gi|351725637|ref|NP_001238379.1| uncharacterized protein LOC100499944 [Glycine max]
gi|255627903|gb|ACU14296.1| unknown [Glycine max]
Length = 164
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
GRS P + DT L V ++ R T DL F K GKV F+ + RT SRGFAFV
Sbjct: 61 HGRSEPSNPGDT--LYVTGLSSRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGFAFVT 118
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQ 90
+ A++A++ + L+ V++GR IT++
Sbjct: 119 MESAEDAERCIKYLNQSVLEGRYITIE 145
>gi|353241625|emb|CCA73428.1| related to NSR1-nuclear localization sequence binding protein
[Piriformospora indica DSM 11827]
Length = 657
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 45/76 (59%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N++F D L+ F ++G +V + +P DR TG +GF +V + + A+ A + L
Sbjct: 492 LFVGNVSFNANEDMLWETFGEHGDIVSVRLPTDRETGQMKGFGYVEFTSVENAKSAFNAL 551
Query: 78 DGRVVDGREITVQFAK 93
+G+ + GR I + F++
Sbjct: 552 NGKDIAGRNIRLDFSQ 567
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 44/76 (57%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V +++ + L F+ G+VV + DR+TG S+GF +V + + A+KA+
Sbjct: 392 NIFVGKLSWNVDDEWLKSEFEACGEVVRASVQMDRQTGRSKGFGYVSFSTPEAAEKAIAE 451
Query: 77 LDGRVVDGREITVQFA 92
++G+ +DGR + V A
Sbjct: 452 MNGKEIDGRAVNVNAA 467
>gi|281353862|gb|EFB29446.1| hypothetical protein PANDA_010269 [Ailuropoda melanoleuca]
Length = 157
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 3 HFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + + + D+RTG SRGFAFV
Sbjct: 52 HTGSRANPDPNT--CLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 109
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D++++A++R +G +DGR I V ++
Sbjct: 110 YFERIDDSKEAMERANGMELDGRRIRVDYS 139
>gi|218200448|gb|EEC82875.1| hypothetical protein OsI_27755 [Oryza sativa Indica Group]
Length = 141
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 48/77 (62%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L + ++ RTT D L F K+G+V+ + DR TG S+GF F+RY ++A K ++
Sbjct: 37 NLFISGLSKRTTTDGLKEAFAKFGEVIHARVVTDRVTGFSKGFGFIRYATVEDAAKGIEG 96
Query: 77 LDGRVVDGREITVQFAK 93
+DG+ +DG I ++A+
Sbjct: 97 MDGKFLDGWVIFAEYAR 113
>gi|15228279|ref|NP_187651.1| small nuclear ribonucleoprotein 31 kDa protein [Arabidopsis
thaliana]
gi|12322795|gb|AAG51392.1|AC011560_24 hypothetical protein; 114721-113936 [Arabidopsis thaliana]
gi|54261729|gb|AAV31168.1| At3g10400 [Arabidopsis thaliana]
gi|61656137|gb|AAX49371.1| At3g10400 [Arabidopsis thaliana]
gi|332641379|gb|AEE74900.1| small nuclear ribonucleoprotein 31 kDa protein [Arabidopsis
thaliana]
Length = 261
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V N+ F T D+ LF +GKV + + +DR T SRG AFV Y ++A KA
Sbjct: 58 TLYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVSREDAAKAARS 117
Query: 77 LDGRVVDGREITVQFA 92
+D ++++GR++TV A
Sbjct: 118 MDAKILNGRKLTVSIA 133
>gi|397525018|ref|XP_003832476.1| PREDICTED: probable RNA-binding protein 19 [Pan paniscus]
Length = 961
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 46/79 (58%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
D+ ++ L V N+ + +T +DL LF KYG + ++ P D T +GFAF+ + + + A
Sbjct: 397 DLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHA 456
Query: 71 QKAVDRLDGRVVDGREITV 89
KA +DG+V GR + V
Sbjct: 457 VKAYSEVDGQVFQGRMLHV 475
Score = 53.5 bits (127), Expect = 8e-05, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGD---SRGFAFVRYKYADEAQKA 73
+L + N+ F TT + L +F K G V I + + S GF FV Y+ ++AQKA
Sbjct: 732 TLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGALLSMGFGFVEYRKPEQAQKA 791
Query: 74 VDRLDGRVVDGREITVQFAK 93
+ +L G VVDG ++ V+ ++
Sbjct: 792 LKQLQGHVVDGHKLEVRISE 811
Score = 38.9 bits (89), Expect = 2.3, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L+V N+ + LF +G + D + + + G R F F+ +K +EAQKA
Sbjct: 4 LIVKNLPNGMKEERFRQLFAAFGTLTDCSL-KFTKDGKFRKFGFIGFKSEEEAQKAQKHF 62
Query: 78 DGRVVDGREITVQFAK 93
+ +D ITV+F K
Sbjct: 63 NKSFIDTSRITVEFCK 78
>gi|342180347|emb|CCC89824.1| putative RNA-binding protein [Trypanosoma congolense IL3000]
Length = 534
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V NI L LF+ YG++V + R+ TG+S G AFVR+ ++AQ+A++
Sbjct: 112 NLFVSNIPRTMGKSGLTTLFEPYGEIVSAAVMRNIHTGESLGTAFVRFATTEQAQRAMEA 171
Query: 77 LDGRVVDGREITVQFAK 93
L G + +GR + VQ+AK
Sbjct: 172 LTGSMQEGRAMIVQWAK 188
>gi|328773827|gb|EGF83864.1| hypothetical protein BATDEDRAFT_8977, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 873
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 9 PPD--ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKY 66
PP I DT ++V N+T+ + +D+ LF +G + ++ IP DR T S+G+AF+ Y
Sbjct: 330 PPAELIADTGRIMVRNLTYLCSPEDIEELFKPFGPISEVHIPIDRETKKSKGYAFIMYLM 389
Query: 67 ADEAQKAVDRLDGRVVDGREITVQFAKYGPNA 98
+ A A LD + GR + + AK P A
Sbjct: 390 PENAVNAYTTLDNTIFQGRIMQIVPAKERPKA 421
Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
D L+V N+ F + D+ LF + +V + IP + G RGFAFV + EA
Sbjct: 756 DTIKGTKLVVRNVPFEASKKDIKELFSSFAQVKSVRIP-TKYDGQHRGFAFVDFLTKQEA 814
Query: 71 QKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDRSTGQGVAVLGEDTEM 127
+ A D L + GR + +++A+ + E ++ + + ST + + ++ +M
Sbjct: 815 KTAYDTLGATHLYGRHLVLEWAQDDESVEAVRSKTIRNFVKTSTKKQRVEMDDEDDM 871
Score = 37.0 bits (84), Expect = 8.6, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L+V N+ + T + L F K G+V D+ + + G R F FV +K ++A+ A+
Sbjct: 3 LIVKNLPYNITPERLKNHFSKKGQVTDVKLA-TTKDGVFRCFGFVGFKTQEQAESALAYF 61
Query: 78 DGRVVDGREITVQFAK 93
+ +D I V+ AK
Sbjct: 62 NKSYIDTSRIEVEVAK 77
>gi|323650232|gb|ADX97202.1| cold-inducible RNA-binding protein [Perca flavescens]
Length = 80
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 48/72 (66%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L + ++F TT + L F K+G + + + +DR TG SRGF FV+Y+ +++A+ A++ +
Sbjct: 4 LFIGGLSFDTTEESLAAAFGKFGTIEKVDVIKDRDTGYSRGFGFVKYENSEDAKDAMEGM 63
Query: 78 DGRVVDGREITV 89
+G+ +DGR I V
Sbjct: 64 NGKTLDGRAIRV 75
>gi|226497574|ref|NP_057280.2| probable RNA-binding protein 19 [Homo sapiens]
gi|226497654|ref|NP_001140170.1| probable RNA-binding protein 19 [Homo sapiens]
gi|226497734|ref|NP_001140171.1| probable RNA-binding protein 19 [Homo sapiens]
gi|308153566|sp|Q9Y4C8.3|RBM19_HUMAN RecName: Full=Probable RNA-binding protein 19; AltName:
Full=RNA-binding motif protein 19
Length = 960
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 46/79 (58%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
D+ ++ L V N+ + +T +DL LF KYG + ++ P D T +GFAF+ + + + A
Sbjct: 397 DLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHA 456
Query: 71 QKAVDRLDGRVVDGREITV 89
KA +DG+V GR + V
Sbjct: 457 VKAYSEVDGQVFQGRMLHV 475
Score = 53.5 bits (127), Expect = 8e-05, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGD---SRGFAFVRYKYADEAQKA 73
+L + N+ F TT + L +F K G V I + + S GF FV Y+ ++AQKA
Sbjct: 731 TLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKA 790
Query: 74 VDRLDGRVVDGREITVQFAK 93
+ +L G VVDG ++ V+ ++
Sbjct: 791 LKQLQGHVVDGHKLEVRISE 810
Score = 38.9 bits (89), Expect = 2.3, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L+V N+ + LF +G + D + + + G R F F+ +K +EAQKA
Sbjct: 4 LIVKNLPNGMKEERFRQLFAAFGTLTDCSL-KFTKDGKFRKFGFIGFKSEEEAQKAQKHF 62
Query: 78 DGRVVDGREITVQFAK 93
+ +D ITV+F K
Sbjct: 63 NKSFIDTSRITVEFCK 78
>gi|5912081|emb|CAB55987.1| hypothetical protein [Homo sapiens]
Length = 960
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 46/79 (58%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
D+ ++ L V N+ + +T +DL LF KYG + ++ P D T +GFAF+ + + + A
Sbjct: 397 DLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHA 456
Query: 71 QKAVDRLDGRVVDGREITV 89
KA +DG+V GR + V
Sbjct: 457 VKAYSEVDGQVFQGRMLHV 475
Score = 53.5 bits (127), Expect = 8e-05, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGD---SRGFAFVRYKYADEAQKA 73
+L + N+ F TT + L +F K G V I + + S GF FV Y+ ++AQKA
Sbjct: 731 TLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKA 790
Query: 74 VDRLDGRVVDGREITVQFAK 93
+ +L G VVDG ++ V+ ++
Sbjct: 791 LKQLQGHVVDGHKLEVRISE 810
Score = 38.9 bits (89), Expect = 2.3, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L+V N+ + LF +G + D + + + G R F F+ +K +EAQKA
Sbjct: 4 LIVKNLPNGMKEERFRQLFAAFGTLTDCSL-KFTKDGKFRKFGFIGFKSEEEAQKAQKHF 62
Query: 78 DGRVVDGREITVQFAK 93
+ +D ITV+F K
Sbjct: 63 NKSFIDTSRITVEFCK 78
>gi|358253577|dbj|GAA53451.1| RNA-binding protein 8A [Clonorchis sinensis]
Length = 712
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 51/88 (57%)
Query: 5 GRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRY 64
G GP + + + V N+ T +D+ F +YG + ++ + DRRTG +G+A V Y
Sbjct: 603 GGPGPQRSIEGWIVFVRNVHEEATEEDIRDKFCEYGDIKNLHLNLDRRTGYLKGYALVEY 662
Query: 65 KYADEAQKAVDRLDGRVVDGREITVQFA 92
+ EAQ A+++LDG V+ G+ I V +A
Sbjct: 663 ELFKEAQTALEQLDGSVLHGQTIRVDWA 690
>gi|402903547|ref|XP_003914625.1| PREDICTED: cold-inducible RNA-binding protein [Papio anubis]
Length = 199
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Query: 13 TDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+D L V ++F T L +F KYG++ ++ + +DR T SRGF FV ++ D+A+
Sbjct: 30 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 89
Query: 73 AVDRLDGRVVDGREITV-QFAKYGPNAERIKEG 104
A+ ++G+ VDGR+I V Q K N R G
Sbjct: 90 AMMAMNGKSVDGRQIRVDQAGKSSDNRSRGYRG 122
>gi|158256324|dbj|BAF84133.1| unnamed protein product [Homo sapiens]
gi|189054403|dbj|BAG37176.1| unnamed protein product [Homo sapiens]
Length = 960
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 46/79 (58%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
D+ ++ L V N+ + +T +DL LF KYG + ++ P D T +GFAF+ + + + A
Sbjct: 397 DLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHA 456
Query: 71 QKAVDRLDGRVVDGREITV 89
KA +DG+V GR + V
Sbjct: 457 VKAYSEVDGQVFQGRMLHV 475
Score = 53.5 bits (127), Expect = 8e-05, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGD---SRGFAFVRYKYADEAQKA 73
+L + N+ F TT + L +F K G V I + + S GF FV Y+ ++AQKA
Sbjct: 731 TLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKA 790
Query: 74 VDRLDGRVVDGREITVQFAK 93
+ +L G VVDG ++ V+ ++
Sbjct: 791 LKQLQGHVVDGHKLEVRISE 810
Score = 38.9 bits (89), Expect = 2.3, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L+V N+ + LF +G + D + + + G R F F+ +K +EAQKA
Sbjct: 4 LIVKNLPNGMKEERFRQLFAAFGTLTDCSL-KFTKDGKFRKFGFIGFKSEEEAQKAQKHF 62
Query: 78 DGRVVDGREITVQFAK 93
+ +D ITV+F K
Sbjct: 63 NKSFIDTSRITVEFCK 78
>gi|342180346|emb|CCC89823.1| unnamed protein product, partial [Trypanosoma congolense IL3000]
Length = 259
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
P + +L+V N+ R L +F YG++V + R+ TG S G AFVR+ +
Sbjct: 56 PNESQSHTNLIVRNLAVRVDESALKRIFSAYGEIVSAAVMRNIHTGGSLGTAFVRFAATE 115
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK 93
A+ A+ GRVV GR ++VQ+AK
Sbjct: 116 HARNALANCHGRVVYGRALSVQWAK 140
>gi|114647138|ref|XP_522578.2| PREDICTED: probable RNA-binding protein 19 [Pan troglodytes]
gi|410216396|gb|JAA05417.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410216398|gb|JAA05418.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410263956|gb|JAA19944.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410263958|gb|JAA19945.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410292596|gb|JAA24898.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410292598|gb|JAA24899.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410339181|gb|JAA38537.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410339183|gb|JAA38538.1| RNA binding motif protein 19 [Pan troglodytes]
Length = 961
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 46/79 (58%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
D+ ++ L V N+ + +T +DL LF KYG + ++ P D T +GFAF+ + + + A
Sbjct: 397 DLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHA 456
Query: 71 QKAVDRLDGRVVDGREITV 89
KA +DG+V GR + V
Sbjct: 457 VKAYSEVDGQVFQGRMLHV 475
Score = 53.5 bits (127), Expect = 9e-05, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGD---SRGFAFVRYKYADEAQKA 73
+L + N+ F TT + L +F K G V I + + S GF FV Y+ ++AQKA
Sbjct: 732 TLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGALLSMGFGFVEYRKPEQAQKA 791
Query: 74 VDRLDGRVVDGREITVQFAK 93
+ +L G VVDG ++ V+ ++
Sbjct: 792 LKQLQGHVVDGHKLEVRISE 811
Score = 38.9 bits (89), Expect = 2.4, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L+V N+ + LF +G + D + + + G R F F+ +K +EAQKA
Sbjct: 4 LIVKNLPNGMKEERFRQLFAAFGTLTDCSL-KFTKDGKFRKFGFIGFKSEEEAQKAQKHF 62
Query: 78 DGRVVDGREITVQFAK 93
+ +D ITV+F K
Sbjct: 63 NKSFIDTSRITVEFCK 78
>gi|116620134|ref|YP_822290.1| RNP-1 like RNA-binding protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116223296|gb|ABJ82005.1| RNP-1 like RNA-binding protein [Candidatus Solibacter usitatus
Ellin6076]
Length = 132
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V N+ F + + + LF++YG+V I DR TG SRGFAFV + EA +A+
Sbjct: 3 NIFVGNLDFNASEEGVRSLFERYGQVNSARIMTDRETGRSRGFAFVEMENEGEADQAISA 62
Query: 77 LDGRVVDGREITVQFAKYGP 96
L+G +DGR + V A+ P
Sbjct: 63 LNGYTLDGRALNVNEARPKP 82
>gi|357122488|ref|XP_003562947.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like
[Brachypodium distachyon]
Length = 138
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V + RTT D L F K+G+V + + DR +G SRGF FV+Y +EA + +
Sbjct: 41 NLFVSGLNKRTTTDGLREAFSKFGQVTEARVITDRISGYSRGFGFVKYATVEEAGEGIKG 100
Query: 77 LDGRVVDGREITVQFAK 93
+DG+ +DG I ++AK
Sbjct: 101 MDGKFLDGWVIFAEYAK 117
>gi|213403304|ref|XP_002172424.1| multiple RNA-binding domain-containing protein [Schizosaccharomyces
japonicus yFS275]
gi|212000471|gb|EEB06131.1| multiple RNA-binding domain-containing protein [Schizosaccharomyces
japonicus yFS275]
Length = 804
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
I+++ L + N+T+ DD+ LF YG + + +P D++T +GFA+V +K D+A
Sbjct: 283 ISESKRLFLRNLTYSCQEDDIVELFQDYGALEQVHVPVDKKTNAPKGFAYVEFKNKDDAI 342
Query: 72 KAVDRLDGRVVDGREITVQFAKYGPN 97
+A LDG GR + + AK N
Sbjct: 343 RAYQDLDGLAFQGRLLHILPAKSRTN 368
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPR--DRRTGDSRGFAFVRYKYADEAQKAVD 75
+L+ N+ F T D+ LF YG++ + +P+ DR +RGFAF + A EA+ A+
Sbjct: 690 ILIKNLPFEATKKDVVSLFGAYGQLRSVRVPKKFDR---TARGFAFAEFVTAREAENAMK 746
Query: 76 RLDGRVVDGREITVQFA 92
L + GR + +Q+A
Sbjct: 747 ALKHTHLLGRHLVLQYA 763
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPR--DRRTGD--SRGFAFVRYKYADE 69
+T +L V NI+F T+ D +F + I +R G S GF FV ++ ++
Sbjct: 584 ETSTLFVKNISFSTSQTDFQRIFASLNGFLSAVIRAKPSKRPGQLMSMGFGFVEFRSKED 643
Query: 70 AQKAVDRLDGRVVDGREITVQFAKYGPNA 98
A A++ + G ++DG ++ ++ + G +A
Sbjct: 644 AVTAMNAMQGFLLDGHKLEIKLSHKGADA 672
>gi|453086560|gb|EMF14602.1| multiple RNA-binding domain-containing protein 1 [Mycosphaerella
populorum SO2202]
Length = 828
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
+ T L V N+++ + +DL F +G + I IP D+ TG S+GFA+V+Y D A+
Sbjct: 302 VRSTMRLFVRNLSYDVSYEDLEAEFSSFGNLEQIHIPLDKTTGSSKGFAYVQYTDPDSAE 361
Query: 72 KAVDRLDGRVVDGREITV 89
KA+ DGR GR I +
Sbjct: 362 KALVDRDGRTFQGRLIHI 379
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+++ N+ F T D+ LF +YG++ + +P+ G +RGFAF + EAQ A+D L
Sbjct: 704 VIIKNLPFEATKKDVRALFGEYGQLRSVRVPKKMDRG-ARGFAFADFTTVKEAQSAMDAL 762
Query: 78 DGRVVDGREITVQFAKYGP-NAER 100
+ GR + + FA+ P +AE+
Sbjct: 763 KDTHLLGRRLVLDFAEEDPEDAEK 786
>gi|356526389|ref|XP_003531800.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
1-like [Glycine max]
Length = 617
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 47/83 (56%)
Query: 7 SGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKY 66
S D+ + V I F T DL P+F +YG+VVD+ + RD+ TG S+ FAF+ Y+
Sbjct: 27 SWHTKYKDSAYIFVGGIPFDLTEGDLLPVFAQYGEVVDVNLVRDKGTGKSKDFAFLAYED 86
Query: 67 ADEAQKAVDRLDGRVVDGREITV 89
A AVD L+G V GR I V
Sbjct: 87 QRSADLAVDNLNGAQVLGRIIKV 109
>gi|443897539|dbj|GAC74879.1| translation initiation factor 3, subunit g [Pseudozyma antarctica
T-34]
Length = 308
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 50/79 (63%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D +L V N++ DDL LF ++G+VV +++ RDR TG +G+AFV ++ ++A +A
Sbjct: 223 DLPTLRVTNLSEDADDDDLRELFGRFGRVVRVYVGRDRETGICKGYAFVSFETREDADRA 282
Query: 74 VDRLDGRVVDGREITVQFA 92
++DGR D ++ Q++
Sbjct: 283 RQKVDGRGYDNLILSCQWS 301
>gi|431922216|gb|ELK19307.1| Cold-inducible RNA-binding protein [Pteropus alecto]
Length = 220
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Query: 13 TDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+D L V ++F T L +F KYG++ ++ + +DR T SRGF FV ++ D+A+
Sbjct: 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62
Query: 73 AVDRLDGRVVDGREITV-QFAKYGPNAERIKEG 104
A+ ++G+ VDGR+I V Q K N R G
Sbjct: 63 AMMAMNGKSVDGRQIRVDQAGKSSDNRSRGYRG 95
>gi|78779883|ref|YP_397995.1| RNA-binding region RNP-1 [Prochlorococcus marinus str. MIT 9312]
gi|78713382|gb|ABB50559.1| RNA-binding region RNP-1 [Prochlorococcus marinus str. MIT 9312]
Length = 100
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ + N+++ T +DL LF YG V ++P DR TG RGFAF+ + +KA+D
Sbjct: 2 TIFIGNLSWETEVEDLEQLFSNYGVVKKCYLPLDRETGRKRGFAFLDLNNQNSEKKAIDD 61
Query: 77 LDGRVVDGREITVQFA--KYGPNAERIKEGLLNH 108
L GREI V A + GPN ++ + N+
Sbjct: 62 LQDVEWMGREIRVNEAEKRKGPNNKKRNKSYSNN 95
>gi|13279134|gb|AAH04289.1| RBM19 protein [Homo sapiens]
gi|13544005|gb|AAH06137.1| RBM19 protein [Homo sapiens]
gi|190689379|gb|ACE86464.1| RNA binding motif protein 19 protein [synthetic construct]
gi|190690741|gb|ACE87145.1| RNA binding motif protein 19 protein [synthetic construct]
Length = 960
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 46/79 (58%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
D+ ++ L V N+ + +T +DL LF KYG + ++ P D T +GFAF+ + + + A
Sbjct: 397 DLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHA 456
Query: 71 QKAVDRLDGRVVDGREITV 89
KA +DG+V GR + V
Sbjct: 457 VKAYSEVDGQVFQGRMLHV 475
Score = 53.5 bits (127), Expect = 9e-05, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGD---SRGFAFVRYKYADEAQKA 73
+L + N+ F TT + L +F K G V I + + S GF FV Y+ ++AQKA
Sbjct: 731 TLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKA 790
Query: 74 VDRLDGRVVDGREITVQFAK 93
+ +L G VVDG ++ V+ ++
Sbjct: 791 LKQLQGHVVDGHKLEVRISE 810
Score = 38.9 bits (89), Expect = 2.4, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L+V N+ + LF +G + D + + + G R F F+ +K +EAQKA
Sbjct: 4 LIVKNLPNGMKEERFRQLFAAFGTLTDCSL-KFTKDGKFRKFGFIGFKSEEEAQKAQKHF 62
Query: 78 DGRVVDGREITVQFAK 93
+ +D ITV+F K
Sbjct: 63 NKSFIDTSRITVEFCK 78
>gi|423302507|ref|ZP_17280529.1| hypothetical protein HMPREF1057_03670 [Bacteroides finegoldii
CL09T03C10]
gi|408470383|gb|EKJ88917.1| hypothetical protein HMPREF1057_03670 [Bacteroides finegoldii
CL09T03C10]
Length = 99
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ + +++RT DL LF ++G+V + DR TG SRGFAFV +E QKA+D
Sbjct: 2 NIYIAGLSYRTNDADLTNLFAEFGEVSSAKVIMDRETGKSRGFAFVEMTSDEEGQKAIDE 61
Query: 77 LDGRVVDGREITVQFAKYGPNAER 100
L+G D + I+V A+ P AE+
Sbjct: 62 LNGVEYDQKVISVSVAR--PRAEK 83
>gi|307192625|gb|EFN75799.1| Probable RNA-binding protein 19 [Harpegnathos saltator]
Length = 863
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 56/101 (55%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
I ++ + + N+T+ TT DD+ LF+KYG + ++ +P D+ T +GF V + + A
Sbjct: 319 IAESGRMFIRNLTYTTTEDDVRKLFEKYGPLSEVNLPVDKVTRRLKGFGTVTFLMPEHAI 378
Query: 72 KAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDR 112
KA LDG V+DGR + + K + E I L++ + +
Sbjct: 379 KAYTELDGSVLDGRMLHLLPGKAKTSLEDIDLSNLSYKQKK 419
Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 12/106 (11%)
Query: 13 TDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFI-----PRDRRTGDSRGFAFVRYKYA 67
+DT +L V NI F TT ++L F K G++ + I P++ S G+ FVRYK
Sbjct: 637 SDT-TLFVKNINFSTTTEELKSYFSKCGRLHYVMIATKKDPKNPGNNLSMGYGFVRYKRK 695
Query: 68 DEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDRS 113
+A +A+ L V+DG+ + ++ +ERI + +R +S
Sbjct: 696 YDADRALKTLQMSVLDGKSLELK------RSERILTSDVKTARKKS 735
Score = 44.3 bits (103), Expect = 0.058, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTG--DSRGFAFVRYKYADEAQKAVD 75
+LV N+ F+ A+++ LF +G++ +PR + G RGFAF+ Y ++A++A
Sbjct: 745 ILVRNVPFQAKAEEITELFKAFGELKATRLPR-KLVGFEKHRGFAFIEYHTKEDAKRAFT 803
Query: 76 RL-DGRVVDGREITVQFAKYGPNAERIKE 103
L + GR + +++A+ N E I++
Sbjct: 804 SLCQSTHLYGRRLVLEWAQAEENLEEIRK 832
>gi|172038249|ref|YP_001804750.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|354554398|ref|ZP_08973703.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
gi|171699703|gb|ACB52684.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|353554077|gb|EHC23468.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
Length = 97
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+++ T +DL +F YG+V + IP DR TG RGFAFV D+ ++A+
Sbjct: 2 SIYVGNLSYDVTKEDLSEVFTDYGEVKRVHIPTDRDTGRMRGFAFVEMNSDDQEEQAIST 61
Query: 77 LDGRVVDGREITVQFAKYGPNAERIKEGLLN 107
LDG GR + V AK ER G N
Sbjct: 62 LDGAEWMGRTLKVNKAK-----ERQPRGSFN 87
>gi|22328599|ref|NP_193122.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|48310472|gb|AAT41827.1| At4g13860 [Arabidopsis thaliana]
gi|332657937|gb|AEE83337.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 87
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 44/73 (60%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ V N++ TT D L F YG VVD + RDR T SRGF FV Y EA+ AV +
Sbjct: 5 VYVGNLSPTTTDDMLREAFSGYGNVVDAIVMRDRYTDRSRGFGFVTYSSHSEAEAAVSGM 64
Query: 78 DGRVVDGREITVQ 90
DG+ ++GR ++V+
Sbjct: 65 DGKELNGRRVSVK 77
>gi|168278697|dbj|BAG11228.1| RNA binding motif protein 19 [synthetic construct]
Length = 960
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 46/79 (58%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
D+ ++ L V N+ + +T +DL LF KYG + ++ P D T +GFAF+ + + + A
Sbjct: 397 DLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHA 456
Query: 71 QKAVDRLDGRVVDGREITV 89
KA +DG+V GR + V
Sbjct: 457 VKAYSEVDGQVFQGRMLHV 475
Score = 53.5 bits (127), Expect = 9e-05, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGD---SRGFAFVRYKYADEAQKA 73
+L + N+ F TT + L +F K G V I + + S GF FV Y+ ++AQKA
Sbjct: 731 TLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKA 790
Query: 74 VDRLDGRVVDGREITVQFAK 93
+ +L G VVDG ++ V+ ++
Sbjct: 791 LKQLQGHVVDGHKLEVRISE 810
Score = 38.9 bits (89), Expect = 2.4, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L+V N+ + LF +G + D + + + G R F F+ +K +EAQKA
Sbjct: 4 LIVKNLPNGMKEERFRQLFAAFGTLTDCSL-KFTKDGKFRKFGFIGFKSEEEAQKAQKHF 62
Query: 78 DGRVVDGREITVQFAK 93
+ +D ITV+F K
Sbjct: 63 NKSFIDTSRITVEFCK 78
>gi|67479353|ref|XP_655058.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56472162|gb|EAL49670.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
Length = 685
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ + N+ F T DD+ FD++G + +I +P D+ T S+GF FV + +A KA + +
Sbjct: 189 IYITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFVLFVVPQDAVKACNEM 248
Query: 78 DGRVVDGREITVQFAKYGP 96
D + + GR + V +AK P
Sbjct: 249 DNKFIKGRIVHVTYAKADP 267
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 15 TYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPR--DRRTGDSRGFAFVRYKYADEAQK 72
+ +L V NI+F+T D + +F+K G+V+ I + + D++ + GF FV Y ++A
Sbjct: 503 SKTLYVKNISFKTKEDVIRKVFEKCGRVLAITLSKTKDKKVEKNSGFGFVEYAKHEDAIN 562
Query: 73 AVDRLDGRVVDGREITVQFAK 93
A+ L G+V+DG + ++ ++
Sbjct: 563 AIKTLQGKVIDGHAVQIEISQ 583
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 15 TYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAV 74
+ LLV N+ F T ++ LF YG + + +P+ + G ++GFAFV Y EA A+
Sbjct: 603 SNKLLVKNVPFETNIKEVRELFRTYGTLRGVRLPK-KVDGQNKGFAFVEYATKQEAANAM 661
Query: 75 DRLDGRVVDGREITVQFAK 93
L GR + +++AK
Sbjct: 662 AALKNSHFYGRHLIIEYAK 680
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+++ N+ R L F+K+G + D + R + G+SR F F+ ++ D+AQ A+ ++
Sbjct: 4 IIIKNLPERADEKILKQQFEKFGGITDCKVMRTPQ-GNSRKFGFIGFENEDQAQTAITKM 62
Query: 78 DGRVVDGREITVQFAK 93
+G + ++ V AK
Sbjct: 63 NGAYIQSSKLQVSLAK 78
>gi|300869358|ref|ZP_07113948.1| RNA-binding region RNP-1 [Oscillatoria sp. PCC 6506]
gi|300332657|emb|CBN59146.1| RNA-binding region RNP-1 [Oscillatoria sp. PCC 6506]
Length = 106
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL V N++++ T +D+ +F +YG V + +P DR TG RGF FV E + A+
Sbjct: 2 SLYVGNLSYQVTQEDIITVFAEYGTVKRVHLPTDRETGRPRGFGFVEMATDAEEEAAITA 61
Query: 77 LDGRVVDGREITVQFAK 93
LDG GRE+ V AK
Sbjct: 62 LDGAEWMGRELKVNKAK 78
>gi|449515273|ref|XP_004164674.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 288
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
D+ L + N+ + + D+ LF + G V D+ I + ++ G SRGFAFV DEA
Sbjct: 89 DVNQKRKLYIFNLPWSLSVVDIKELFGQCGTVSDVEIIK-QKNGRSRGFAFVTMASPDEA 147
Query: 71 QKAVDRLDGRVVDGREITVQFAK 93
Q A+ + D + + GR I V+FAK
Sbjct: 148 QAAIQKFDSQEISGRVIKVEFAK 170
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N+ ++ +++L F + + + D G S G+ FV + +EAQ A+ L
Sbjct: 192 LYVSNLAWKVRSNNLRDFFSENFNPIAARVVFDSPAGRSAGYGFVSFATREEAQTALSSL 251
Query: 78 DGRVVDGREITVQFAKYGPN-AERIKEGLLNHSRDRS 113
+G+ + GR + ++F++ N AE KE ++ + S
Sbjct: 252 EGKELMGRPLRLKFSERNVNEAETPKEDIVESQPEES 288
>gi|40788328|dbj|BAA31657.2| KIAA0682 protein [Homo sapiens]
Length = 973
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 46/79 (58%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
D+ ++ L V N+ + +T +DL LF KYG + ++ P D T +GFAF+ + + + A
Sbjct: 410 DLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHA 469
Query: 71 QKAVDRLDGRVVDGREITV 89
KA +DG+V GR + V
Sbjct: 470 VKAYSEVDGQVFQGRMLHV 488
Score = 53.5 bits (127), Expect = 9e-05, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGD---SRGFAFVRYKYADEAQKA 73
+L + N+ F TT + L +F K G V I + + S GF FV Y+ ++AQKA
Sbjct: 744 TLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKA 803
Query: 74 VDRLDGRVVDGREITVQFAK 93
+ +L G VVDG ++ V+ ++
Sbjct: 804 LKQLQGHVVDGHKLEVRISE 823
Score = 38.9 bits (89), Expect = 2.4, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L+V N+ + LF +G + D + + + G R F F+ +K +EAQKA
Sbjct: 17 LIVKNLPNGMKEERFRQLFAAFGTLTDCSL-KFTKDGKFRKFGFIGFKSEEEAQKAQKHF 75
Query: 78 DGRVVDGREITVQFAK 93
+ +D ITV+F K
Sbjct: 76 NKSFIDTSRITVEFCK 91
>gi|409047364|gb|EKM56843.1| hypothetical protein PHACADRAFT_254184 [Phanerochaete carnosa
HHB-10118-sp]
Length = 287
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D +L V NI+ T +DL LF +G+V +++ RDR TG +GFAFV ++ AQ+A
Sbjct: 203 DLPTLRVTNISEDTQENDLRDLFGAFGRVARVYVGRDRETGAGKGFAFVSFEDKAVAQRA 262
Query: 74 VDRLDGRVVDGREITVQFAKYGPNAER 100
+++ GR D ++VQ+++ P +R
Sbjct: 263 MEKTHGRGYDNLILSVQWSQ--PREQR 287
>gi|291225685|ref|XP_002732813.1| PREDICTED: splicing factor, arginine/serine-rich 10-like
[Saccoglossus kowalevskii]
Length = 269
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFV 62
H G P+ + L V ++ TT +L F +YG + +I + D ++G SRGFAF+
Sbjct: 104 HIGSRANPETNNC--LGVFGLSLSTTERELREAFGRYGPIANINVVYDHQSGRSRGFAFL 161
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
Y+ ++A++A DR +G +DGR I V ++
Sbjct: 162 SYESEEDAREAKDRTNGMEIDGRRIRVDYS 191
>gi|242083506|ref|XP_002442178.1| hypothetical protein SORBIDRAFT_08g015580 [Sorghum bicolor]
gi|241942871|gb|EES16016.1| hypothetical protein SORBIDRAFT_08g015580 [Sorghum bicolor]
Length = 250
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V +++ T L F KYG+V++ I DR +G SRGF FV Y ++EA A+ +
Sbjct: 32 LFVGGLSYGTDDHSLRDEFAKYGEVIEARIILDRESGRSRGFGFVTYTSSEEASAAITAM 91
Query: 78 DGRVVDGREITVQFAK 93
DG+ +DGR I V A
Sbjct: 92 DGKTLDGRSIRVNHAN 107
>gi|443919574|gb|ELU39701.1| RNA recognition motif domain-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 716
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
++ ++ V +++ D L F G VV + DR +G SRGFA+V + EAQKA
Sbjct: 108 ESNTVFVGRLSWNVDNDWLAQEFQGCGTVVAARVQMDRNSGKSRGFAYVEFSSPAEAQKA 167
Query: 74 VDRLDGRVVDGREITVQFAK-YGPNAER 100
V+ ++G+ +DGRE+ V ++ PN E+
Sbjct: 168 VEEMNGKQIDGREVNVDISQPRQPNPEK 195
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 48/79 (60%)
Query: 15 TYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAV 74
+ +L V N+++ TT D L+ F ++G V + +P D+ +G +GF +V + + A KA
Sbjct: 208 STTLFVGNLSWNTTEDGLWTAFGEFGDVTHVRLPTDQESGKPKGFGYVEFGDQEGATKAY 267
Query: 75 DRLDGRVVDGREITVQFAK 93
+ + G+ +DGR + + +++
Sbjct: 268 EAMKGKDLDGRTLRLDYSQ 286
>gi|294868078|ref|XP_002765370.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239865389|gb|EEQ98087.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 204
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 49/87 (56%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
+ D +S+ V I R DDL F K+G++ D+FIP DR TG SRGF FVR+ +A+
Sbjct: 6 LNDLFSIKVDGIDERVRKDDLREAFSKFGEIGDVFIPLDRYTGVSRGFGFVRFYERRDAE 65
Query: 72 KAVDRLDGRVVDGREITVQFAKYGPNA 98
A+ +D + G ITV A Y +
Sbjct: 66 DAIRDMDNKEFQGCRITVAAAMYNKES 92
>gi|255547195|ref|XP_002514655.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223546259|gb|EEF47761.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 267
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ V I+++T L F KYG+V++ + DR TG SRGFAFV Y ++EA A+ L
Sbjct: 42 VFVGGISYQTDDTSLREAFGKYGEVIEARVIIDRETGRSRGFAFVTYTSSEEASSAIQAL 101
Query: 78 DGRVVDGREITVQFAKYGP 96
DG+ + GR + V +A P
Sbjct: 102 DGQDLHGRRVRVNYANDRP 120
>gi|209155104|gb|ACI33784.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|223648252|gb|ACN10884.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 167
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 49/78 (62%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
++D L V ++F T L +F KYG++ ++ + +DR T SRGF FV ++ DEA+
Sbjct: 1 MSDEGKLFVGGLSFDTNEQSLEDVFSKYGQISEVVVIKDRETQRSRGFGFVTFENPDEAK 60
Query: 72 KAVDRLDGRVVDGREITV 89
A+ ++G+ +DGR+I V
Sbjct: 61 DAMLAMNGKSLDGRQIRV 78
>gi|157870247|ref|XP_001683674.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68126740|emb|CAJ05119.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 692
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 48/85 (56%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
P D+ +L V + +L LF+K+G++ + D TG SRG AFV++K +
Sbjct: 223 PNDVEVRSNLFVCGLPVSVRDKELLELFEKHGEIESAKVMLDIHTGRSRGIAFVKFKNVE 282
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK 93
A+ AVD L+G V+G +ITV+ A
Sbjct: 283 HAENAVDALNGTTVNGHQITVRVAN 307
>gi|434405771|ref|YP_007148656.1| RRM domain-containing RNA-binding protein [Cylindrospermum stagnale
PCC 7417]
gi|428260026|gb|AFZ25976.1| RRM domain-containing RNA-binding protein [Cylindrospermum stagnale
PCC 7417]
Length = 103
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N++++ T +DL F +YG V + +P DR TG RGFAFV + + Q A+D
Sbjct: 2 SIYVGNLSYQVTEEDLKLAFKEYGTVNRVQLPTDRETGRPRGFAFVEMETDVQEQAAIDA 61
Query: 77 LDGRVVDGREITVQFAKYGPNAER 100
LDG GR++ V AK P ER
Sbjct: 62 LDGAEWMGRDLKVNKAK--PREER 83
>gi|226496497|ref|NP_001150207.1| LOC100283837 [Zea mays]
gi|195621336|gb|ACG32498.1| nucleolin [Zea mays]
gi|195637560|gb|ACG38248.1| nucleolin [Zea mays]
gi|223948323|gb|ACN28245.1| unknown [Zea mays]
gi|413917478|gb|AFW57410.1| nucleolin [Zea mays]
Length = 140
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 3/106 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V ++ RTT++ L F ++G+V+ + DR +G S+GF FVRY +EA K ++
Sbjct: 36 NLFVSGLSKRTTSEGLREAFAEFGEVLHARVVTDRVSGFSKGFGFVRYATTEEAAKGIEG 95
Query: 77 LDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDRSTGQGVAVLG 122
DG+ +DG I ++AK P E E +N +S G G
Sbjct: 96 KDGKFLDGWVIFAEYAKPRPPPE---ETGMNSQPQQSWGAPSGSWG 138
>gi|449674933|ref|XP_002158647.2| PREDICTED: transformer-2 protein homolog beta-like [Hydra
magnipapillata]
Length = 221
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++ TT ++ F++YG+VVD + D TG SRGFAF+ EA+ A +R+
Sbjct: 98 LGVFGLSLYTTDREVREAFERYGRVVDCNVVHDHNTGRSRGFAFLNMSSISEAEDAKERM 157
Query: 78 DGRVVDGREITVQFA 92
+G +DGR I V F+
Sbjct: 158 NGAELDGRRIRVDFS 172
>gi|348582426|ref|XP_003476977.1| PREDICTED: transformer-2 protein homolog beta-like [Cavia
porcellus]
Length = 337
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + D+ I D+++ SRGFAFV
Sbjct: 153 HVGNRANPDPNCC--LGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFV 210
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D+A++A +R +G +DGR I V F+
Sbjct: 211 YFENVDDAKEAKERANGMELDGRRIRVDFS 240
>gi|326434653|gb|EGD80223.1| RNA-binding protein 8A [Salpingoeca sp. ATCC 50818]
Length = 144
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 50/84 (59%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
P + + ++V N+ DD++ F ++GK+ ++ + DRRTG +G+A V Y+ +
Sbjct: 45 PQRSVEGWIVIVTNVHEEAQDDDIYDKFTEFGKIKNLHLNLDRRTGYVKGYALVEYEQQE 104
Query: 69 EAQKAVDRLDGRVVDGREITVQFA 92
EA +AV G+ V G+E+TV +A
Sbjct: 105 EAARAVSEGTGQEVLGQEVTVNWA 128
>gi|339258866|ref|XP_003369619.1| putative peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Trichinella spiralis]
gi|316966115|gb|EFV50740.1| putative peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Trichinella spiralis]
Length = 403
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 3 HFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFV 62
H+ PPD L V + TT DDL +F ++G ++ + RDR+TGDS +AF+
Sbjct: 231 HYAEEKPPDNV----LFVCKLNAVTTEDDLEVIFGRFGPILSCEVIRDRKTGDSLQYAFI 286
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFAK 93
+ A + A ++D ++D R I V F++
Sbjct: 287 EFADAKHCENAYFKMDNVLIDDRRIHVDFSQ 317
>gi|212720737|ref|NP_001131267.1| uncharacterized protein LOC100192580 [Zea mays]
gi|194691034|gb|ACF79601.1| unknown [Zea mays]
gi|195655121|gb|ACG47028.1| eukaryotic translation initiation factor 3 subunit 4 [Zea mays]
gi|413921416|gb|AFW61348.1| eukaryotic translation initiation factor 3 subunit 4 [Zea mays]
Length = 287
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 51/85 (60%)
Query: 13 TDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
D S+ V N++ T DL LF +G V +++ D++TG SRGF FV + + ++A+K
Sbjct: 203 NDENSVRVTNLSEDTREPDLLELFRAFGPVSRVYVAVDQKTGSSRGFGFVNFVHREDAEK 262
Query: 73 AVDRLDGRVVDGREITVQFAKYGPN 97
A+++L+G D + V++A PN
Sbjct: 263 AINKLNGYGYDNLILRVEWATPRPN 287
>gi|395513325|ref|XP_003760877.1| PREDICTED: cold-inducible RNA-binding protein [Sarcophilus
harrisii]
Length = 172
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 48/77 (62%)
Query: 13 TDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+D L V ++F T L +F KYG++ ++ + +DR T SRGF FV ++ D+A+
Sbjct: 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKD 62
Query: 73 AVDRLDGRVVDGREITV 89
A+ ++G+ VDGR+I V
Sbjct: 63 AMMAMNGKSVDGRQIRV 79
>gi|385301644|gb|EIF45821.1| multiple rna-binding domain-containing protein 1 [Dekkera
bruxellensis AWRI1499]
Length = 633
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
+I T L + NI + +T D LF+ YG++ ++ + D RTG S+GFA+V++K EA
Sbjct: 328 EIEKTGRLFLRNILYTSTESDFQTLFESYGELKEVHVAVDSRTGASKGFAYVQFKNPSEA 387
Query: 71 QKAVDRLDGRVVDGR 85
A LDG + GR
Sbjct: 388 IXAYKELDGSIFQGR 402
Score = 43.5 bits (101), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 30 DDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDGRVVDGREITV 89
D L +F + G V D+ + R +R G SR FAF+ +K ++A++ V DG D ++TV
Sbjct: 16 DKLRKVFSEDGPVTDVKLVR-KRNGQSRRFAFIGFKTMEDAERVVKFRDGTYXDTAKVTV 74
Query: 90 QFAK 93
Q AK
Sbjct: 75 QLAK 78
>gi|351694750|gb|EHA97668.1| Putative RNA-binding protein 19 [Heterocephalus glaber]
Length = 955
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 45/79 (56%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
D+ D+ L V N+ + +T +DL LF YG + ++ P D T +GFAFV + + + A
Sbjct: 392 DLADSGRLFVRNLPYTSTEEDLEKLFSTYGPLSELHFPIDSLTKKPKGFAFVTFLFPEHA 451
Query: 71 QKAVDRLDGRVVDGREITV 89
KA +DG+V GR + V
Sbjct: 452 VKAYSAVDGQVFQGRMLHV 470
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGD---SRGFAFVRYKYADEAQKA 73
+L + N+ F TT + L +F K G V + + + S GF FV Y+ + AQKA
Sbjct: 726 TLFIKNLNFDTTEETLKEVFSKAGAVRSCSVSKKKNKEGALLSMGFGFVEYRKPEHAQKA 785
Query: 74 VDRLDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDR 112
+ +L G VVDG ++ ++ +ER L SR +
Sbjct: 786 LRQLQGHVVDGHKLELRI------SERATRPALTSSRKK 818
>gi|282900575|ref|ZP_06308517.1| RNA-binding region protein RNP-1 [Cylindrospermopsis raciborskii
CS-505]
gi|281194375|gb|EFA69330.1| RNA-binding region protein RNP-1 [Cylindrospermopsis raciborskii
CS-505]
Length = 103
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+++ T +DL F KYG V + +P D+ TG RGF FV E A+D
Sbjct: 2 SIYVGNLSYDVTLEDLKSAFSKYGNVSKVQLPTDKETGRPRGFGFVDMSSEAEENAAIDA 61
Query: 77 LDGRVVDGREITVQFAKYGPNAERIKEGLL 106
L+G GR++ V A+ P ER +G
Sbjct: 62 LNGAEWMGRQLKVNKAR--PREERSSQGTW 89
>gi|449462067|ref|XP_004148763.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like [Cucumis
sativus]
Length = 282
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
D+ L + N+ + + D+ LF + G V D+ I + ++ G SRGFAFV DEA
Sbjct: 83 DVNQKRKLYIFNLPWSLSVVDIKELFGQCGTVSDVEIIK-QKNGRSRGFAFVTMASPDEA 141
Query: 71 QKAVDRLDGRVVDGREITVQFAK 93
Q A+ + D + + GR I V+FAK
Sbjct: 142 QAAIQKFDSQEISGRVIKVEFAK 164
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N+ ++ +++L F + + + D G S G+ FV + +EAQ A+ L
Sbjct: 186 LYVSNLAWKVRSNNLRDFFSENFNPIAARVVFDSPAGRSAGYGFVSFATREEAQTALSSL 245
Query: 78 DGRVVDGREITVQFAKYGPN-AERIKEGLLNHSRDRS 113
+G+ + GR + ++F++ N AE KE ++ + S
Sbjct: 246 EGKELMGRPLRLKFSERNVNEAETPKEDIVESQPEES 282
>gi|441656594|ref|XP_003277032.2| PREDICTED: cold-inducible RNA-binding protein [Nomascus leucogenys]
Length = 144
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 13 TDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+D L V ++F T L +F KYG++ ++ + +DR T SRGF FV ++ D+A+
Sbjct: 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62
Query: 73 AVDRLDGRVVDGREITV-QFAKYGPNAER 100
A+ ++G+ VDGR+I V Q K N R
Sbjct: 63 AMMAMNGKSVDGRQIRVDQAGKSSDNRSR 91
>gi|417405465|gb|JAA49443.1| Putative rna-binding protein rrm superfamily [Desmodus rotundus]
Length = 968
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 46/79 (58%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
D+ D+ L V N+ + +T +DL LF K+G + ++ P D T +GFAFV + + + A
Sbjct: 399 DLADSGRLFVRNLPYTSTEEDLEQLFSKFGPLSELHYPIDSLTKKPKGFAFVTFMFPEHA 458
Query: 71 QKAVDRLDGRVVDGREITV 89
KA +DG+V GR + V
Sbjct: 459 VKAYAEVDGQVFQGRMLHV 477
Score = 50.4 bits (119), Expect = 7e-04, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGD---SRGFAFVRYKYADEAQKA 73
+L + N+ F TT + L +F K G V I R S GF FV Y+ ++AQKA
Sbjct: 730 TLFIKNLNFDTTEETLKGVFSKVGAVKSCSISRKTNKAGALLSMGFGFVEYRKPEQAQKA 789
Query: 74 VDRLDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDR 112
+ +L G VVD ++ V+ +ER + L +R +
Sbjct: 790 LKQLQGHVVDSHKLEVRI------SERATKPALTSTRKK 822
Score = 40.0 bits (92), Expect = 1.2, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 10 PDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRR-TGDSRGFAFVRYKYAD 68
P T +LV NI F+ + ++ LF +G++ + +P+ TG RGF FV +
Sbjct: 825 PRKQTTSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDFLTKQ 884
Query: 69 EAQKAVDRL-DGRVVDGREITVQFA 92
+A++A + L + GR + +++A
Sbjct: 885 DAKRAFNALCHSTHLYGRRLVLEWA 909
Score = 38.9 bits (89), Expect = 2.1, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L+V N+ + LF +G + D + + + G R F F+ +K +EAQ+A++
Sbjct: 4 LIVKNLPNGMKEERFKQLFAAFGTLTDCSL-KFTKDGKFRKFGFIGFKSEEEAQQALNHF 62
Query: 78 DGRVVDGREITVQFAK 93
+ +D ITV+F K
Sbjct: 63 NRSFIDTSRITVEFCK 78
>gi|334326698|ref|XP_001365067.2| PREDICTED: cold-inducible RNA-binding protein-like [Monodelphis
domestica]
Length = 172
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 48/77 (62%)
Query: 13 TDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+D L V ++F T L +F KYG++ ++ + +DR T SRGF FV ++ D+A+
Sbjct: 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKD 62
Query: 73 AVDRLDGRVVDGREITV 89
A+ ++G+ VDGR+I V
Sbjct: 63 AMMAMNGKSVDGRQIRV 79
>gi|167382576|ref|XP_001736171.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165901525|gb|EDR27604.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 697
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ + N+ F T DD+ FD++G + +I +P D+ T S+GF FV + +A KA + +
Sbjct: 188 IYITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFVLFVVPQDAVKACNEM 247
Query: 78 DGRVVDGREITVQFAKYGP 96
D + + GR + V +AK P
Sbjct: 248 DNKFIKGRIVHVTYAKADP 266
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 55/92 (59%), Gaps = 4/92 (4%)
Query: 6 RSGPPDITD--TYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPR--DRRTGDSRGFAF 61
++ P++ + + +L + N++F+T D + +F+K G+V+ + + + D++ + GF F
Sbjct: 504 KTDQPELVEEGSKTLYIKNLSFKTKEDVIRKVFEKCGRVLAVTLSKTKDKKVEKNSGFGF 563
Query: 62 VRYKYADEAQKAVDRLDGRVVDGREITVQFAK 93
V Y ++A A+ L G+V+DG + ++ ++
Sbjct: 564 VEYARHEDAINAIKTLQGKVIDGHAVQIEISQ 595
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 15 TYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAV 74
+ LLV N+ F T ++ LF YG + + +P+ + G ++GFAFV Y EA A+
Sbjct: 615 SNKLLVKNVPFETNIKEVRELFRTYGTLRGVRLPK-KVDGQNKGFAFVEYATKQEAANAM 673
Query: 75 DRLDGRVVDGREITVQFAK 93
L GR + +++AK
Sbjct: 674 AALKNSHFYGRHLIIEYAK 692
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+++ N+ R L F+K+G + D + R + G SR F F+ ++ D+AQ A+ ++
Sbjct: 4 IIIKNLPERADEKILKQQFEKFGGITDCKVMRTPQ-GVSRKFGFIGFENEDQAQTAITKM 62
Query: 78 DGRVVDGREITVQFAK 93
+G + ++ V AK
Sbjct: 63 NGAYIQSSKLQVSLAK 78
>gi|75908205|ref|YP_322501.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
gi|75701930|gb|ABA21606.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
Length = 109
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ + N++++ T +DL F +YGKV + +P DR TG RGFAFV + + A++
Sbjct: 2 SIYIGNLSYQVTEEDLKLAFAEYGKVSRVQLPTDRETGRPRGFAFVEMETEAQETAAIEA 61
Query: 77 LDGRVVDGREITVQFAKYGPNAER 100
LDG GR++ V AK P ER
Sbjct: 62 LDGAEWMGRDLKVNKAK--PREER 83
>gi|15231311|ref|NP_190188.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|7630030|emb|CAB88326.1| RNA binding protein-like [Arabidopsis thaliana]
gi|46931202|gb|AAT06405.1| At3g46020 [Arabidopsis thaliana]
gi|50253530|gb|AAT71967.1| At3g46020 [Arabidopsis thaliana]
gi|332644581|gb|AEE78102.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 102
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 4/99 (4%)
Query: 15 TYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAV 74
+ L V ++ TT L LF +G++ + + RD T +GF F+ + D+A+KA+
Sbjct: 6 SAQLFVSRLSAYTTDQSLRQLFSPFGQIKEARLIRDSETQRPKGFGFITFDSEDDARKAL 65
Query: 75 DRLDGRVVDGREITVQFAKYGPNAERIKEGL-LNHSRDR 112
LDG++VDGR I V+ AK NAE ++ G+ N + DR
Sbjct: 66 KSLDGKIVDGRLIFVEVAK---NAEEVRAGINSNKAEDR 101
>gi|449707231|gb|EMD46930.1| RNA recognition domain containing protein [Entamoeba histolytica
KU27]
Length = 685
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ + N+ F T DD+ FD++G + +I +P D+ T S+GF FV + +A KA + +
Sbjct: 189 IYITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFVLFVVPQDAVKACNEM 248
Query: 78 DGRVVDGREITVQFAKYGP 96
D + + GR + V +AK P
Sbjct: 249 DNKFIKGRIVHVTYAKADP 267
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 15 TYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPR--DRRTGDSRGFAFVRYKYADEAQK 72
+ +L V NI+F+T D + +F+K G+V+ I + + D++ + GF FV Y ++A
Sbjct: 503 SKTLYVKNISFKTKEDVIRKVFEKCGRVLAITLSKTKDKKVEKNSGFGFVEYAKHEDAIN 562
Query: 73 AVDRLDGRVVDGREITVQFAK 93
A+ L G+V+DG + ++ ++
Sbjct: 563 AIKTLQGKVIDGHAVQIEISQ 583
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 15 TYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAV 74
+ LLV N+ F T ++ LF YG + + +P+ + G ++GFAFV Y EA A+
Sbjct: 603 SNKLLVKNVPFETNIKEVRELFRTYGTLRGVRLPK-KVDGQNKGFAFVEYATKQEAANAM 661
Query: 75 DRLDGRVVDGREITVQFAK 93
L GR + +++AK
Sbjct: 662 AALKNSHFYGRHLIIEYAK 680
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+++ N+ R L F+K+G + D + R + G+SR F F+ ++ D+AQ A+ ++
Sbjct: 4 IIIKNLPERADEKILKQQFEKFGGITDCKVMRTPQ-GNSRKFGFIGFENEDQAQTAITKM 62
Query: 78 DGRVVDGREITVQFAK 93
+G + ++ V AK
Sbjct: 63 NGAYIQSSKLQVSLAK 78
>gi|383415877|gb|AFH31152.1| serine/arginine-rich splicing factor 12 [Macaca mulatta]
Length = 261
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 56/93 (60%), Gaps = 6/93 (6%)
Query: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
MS + R PP+ SL + N+ T +DL F +YG +VD++IP D T RGFA
Sbjct: 1 MSRYTR--PPNT----SLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFA 54
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAK 93
+V+++ EA+ A+ L+ + V GR+I +QFA+
Sbjct: 55 YVQFEDVREAEDALYNLNRKWVCGRQIEIQFAQ 87
>gi|327398778|ref|YP_004339647.1| RNP-1 like RNA-binding protein [Hippea maritima DSM 10411]
gi|327181407|gb|AEA33588.1| RNP-1 like RNA-binding protein [Hippea maritima DSM 10411]
Length = 86
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V N+ + TT D+L LF +YG+V I DR TG SRGF FV D+AQKA+D
Sbjct: 4 TLYVGNLPYSTTEDELKELFGEYGEVSSTKIITDRETGRSRGFGFVEMS-DDDAQKAIDS 62
Query: 77 LDGRVVDGREITVQFAK 93
L+G GR + V A+
Sbjct: 63 LNGVNFGGRNLKVNEAR 79
>gi|325279880|ref|YP_004252422.1| RNP-1 like RNA-binding protein [Odoribacter splanchnicus DSM 20712]
gi|324311689|gb|ADY32242.1| RNP-1 like RNA-binding protein [Odoribacter splanchnicus DSM 20712]
Length = 99
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ + +++ TT DL LF +YG++ I DR TG SRGF FV E QKA+D
Sbjct: 2 NIYISGLSYGTTDADLNELFSEYGEISSAKIISDRETGRSRGFGFVEMTNDTEGQKAIDE 61
Query: 77 LDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDRST 114
L+G D + I V A+ P ER G RDR++
Sbjct: 62 LNGAEYDHKVIAVSIAR--PRTERQSNGGY---RDRNS 94
>gi|254416097|ref|ZP_05029852.1| RNA-binding protein, putative [Coleofasciculus chthonoplastes PCC
7420]
gi|196177030|gb|EDX72039.1| RNA-binding protein, putative [Coleofasciculus chthonoplastes PCC
7420]
Length = 95
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+ + T++DL +F +YG V + +P DR TG RGF FV DE A+
Sbjct: 2 SIYVGNLDYSVTSEDLSEVFAEYGTVKRVHLPTDRETGRLRGFGFVEMGTEDEEASAISE 61
Query: 77 LDGRVVDGREITVQFAKYGPNAERIKEG 104
L+G GRE+ V A+ P +R K G
Sbjct: 62 LNGAEWMGRELKVNQAR--PREDRPKSG 87
>gi|374385669|ref|ZP_09643172.1| hypothetical protein HMPREF9449_01558 [Odoribacter laneus YIT
12061]
gi|373225371|gb|EHP47705.1| hypothetical protein HMPREF9449_01558 [Odoribacter laneus YIT
12061]
Length = 100
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ + N++ +L LF++YG++ + DR +G SRGF FV K DE QKA+
Sbjct: 2 NIYISNLSHGINDANLHELFNEYGEISSAKVITDRESGRSRGFGFVEMKNDDEGQKAISE 61
Query: 77 LDGRVVDGREITVQFAKYGPNAERIKEGLLN 107
L+ DGR I+V A+ P ER G N
Sbjct: 62 LNEAEYDGRIISVAVAR--PRTERSNNGSYN 90
>gi|357139508|ref|XP_003571323.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 288
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 44/77 (57%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N+ R DDL LF YG V+ + + RD TG SRG FV + A+ A++ L
Sbjct: 103 LFVCNLPRRCGVDDLLHLFQPYGTVLSVEVSRDPETGISRGCGFVTMRSLAAARTAMNAL 162
Query: 78 DGRVVDGREITVQFAKY 94
DG +DGRE+ V+ A +
Sbjct: 163 DGFDLDGREMFVKLASH 179
>gi|393788074|ref|ZP_10376205.1| hypothetical protein HMPREF1068_02485 [Bacteroides nordii
CL02T12C05]
gi|392656287|gb|EIY49926.1| hypothetical protein HMPREF1068_02485 [Bacteroides nordii
CL02T12C05]
Length = 97
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ + ++F DL LF +YG+V + DR TG SRGFAFV E QKA+D
Sbjct: 2 NIYISGLSFSANDADLNNLFAEYGEVSSAKVILDRETGKSRGFAFVEMTNDTEGQKAIDE 61
Query: 77 LDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDR 112
L+G D + I V A+ P E+ G N++ R
Sbjct: 62 LNGVEYDQKVIAVSIAR--PRTEKTSNGGRNYNNSR 95
>gi|348564374|ref|XP_003467980.1| PREDICTED: transformer-2 protein homolog alpha-like [Cavia
porcellus]
Length = 393
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 3 HFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + + + D+RTG SRGFAFV
Sbjct: 113 HTGSRANPDPNTC--LGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 170
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D++++A++R +G +DGR I V ++
Sbjct: 171 YFERIDDSKEAMERANGMELDGRRIRVDYS 200
>gi|255644989|gb|ACU22994.1| unknown [Glycine max]
Length = 214
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL F ++G + DI++P+D TG+ RGF FV+Y +A A
Sbjct: 42 SLLVRNLRHDCRPEDLRRPFGQFGPLKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKYH 101
Query: 77 LDGRVVDGREITVQFAK 93
+DG+V+ GRE+TV FA+
Sbjct: 102 MDGQVLLGRELTVVFAE 118
>gi|169626491|ref|XP_001806645.1| hypothetical protein SNOG_16535 [Phaeosphaeria nodorum SN15]
gi|160706106|gb|EAT76075.2| hypothetical protein SNOG_16535 [Phaeosphaeria nodorum SN15]
Length = 321
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
PP T L + N+ + T + L +F ++G+V + I D R G SRGF +V +K D
Sbjct: 126 PPHNT----LYIGNLYYEVTTEQLQKVFSRFGEVASVKIVYDNR-GMSRGFGYVEFKSID 180
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYGPNAERIK 102
+AQ A+D LD +V +GR + VQ+ + +++R K
Sbjct: 181 DAQTAIDNLDMQVFEGRNLVVQYHRAKSDSDRPK 214
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%)
Query: 6 RSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYK 65
R PP + +L + N++F + DL LF V D+ + DRRTG RGFA +
Sbjct: 215 REFPPANLPSKTLFIGNMSFEMSDKDLNDLFRDIRNVNDVRVAIDRRTGQPRGFAHADFL 274
Query: 66 YADEAQKAVDRLDGRVVDGREITVQFAK 93
A KA + L + + GRE+ V F++
Sbjct: 275 DVASATKAKEILSAKTIYGRELRVDFSR 302
>gi|187282153|ref|NP_001119768.1| transformer-2 protein homolog alpha [Rattus norvegicus]
gi|149033412|gb|EDL88213.1| similar to RIKEN cDNA G430041M01 (predicted) [Rattus norvegicus]
Length = 235
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 3 HFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + + + D+RTG SRGFAFV
Sbjct: 106 HTGSRANPDPNTC--LGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 163
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D++++A++R +G +DGR I V ++
Sbjct: 164 YFERIDDSKEAMERANGMELDGRRIRVDYS 193
>gi|728594|emb|CAA88558.1| glycine rich protein, RNA binding protein [Hordeum vulgare subsp.
vulgare]
Length = 173
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%)
Query: 16 YSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVD 75
Y V + + T +L F +YG+++D I DR TG SRGF FV + + ++A++
Sbjct: 6 YRCFVGGLAWATDDHNLQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMRQAIE 65
Query: 76 RLDGRVVDGREITVQFAK 93
++G+ +DGR++TV A+
Sbjct: 66 EMNGKELDGRQVTVNEAQ 83
>gi|448088433|ref|XP_004196543.1| Piso0_003765 [Millerozyma farinosa CBS 7064]
gi|448092564|ref|XP_004197574.1| Piso0_003765 [Millerozyma farinosa CBS 7064]
gi|359377965|emb|CCE84224.1| Piso0_003765 [Millerozyma farinosa CBS 7064]
gi|359378996|emb|CCE83193.1| Piso0_003765 [Millerozyma farinosa CBS 7064]
Length = 751
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 18 LLVLNITFR-TTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
L++ N+ + A++L PLF KYG V D +IPR ++ G GFAFV K A+KAV
Sbjct: 130 LIIRNLPWSCKNAEELKPLFSKYGAVFDAYIPR-KKGGRMCGFAFVVMKKQSAAEKAVKE 188
Query: 77 LDGRVVDGREITVQFAKYGPNAERIKE 103
G + GRE+ V FA E IKE
Sbjct: 189 SVGLKIHGREVAVDFAVEKSKWEEIKE 215
>gi|156403590|ref|XP_001639991.1| predicted protein [Nematostella vectensis]
gi|156227123|gb|EDO47928.1| predicted protein [Nematostella vectensis]
Length = 91
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%)
Query: 16 YSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVD 75
+ L V NI DD+ LF YG++ ++ + DRRTG +G+A V Y+ EAQ A++
Sbjct: 5 WILFVTNIHEEAQEDDIHELFSDYGEIKNLHVNLDRRTGFIKGYALVEYETFKEAQSALE 64
Query: 76 RLDGRVVDGREITVQFA 92
L+G + G+ I+V +A
Sbjct: 65 ALNGAEMLGQNISVDWA 81
>gi|417397313|gb|JAA45690.1| Putative rasgap sh3 binding protein rasputin [Desmodus rotundus]
Length = 218
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 48/77 (62%)
Query: 13 TDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+D L V ++F T L +F KYG++ ++ + +DR T SRGF FV ++ D+A+
Sbjct: 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62
Query: 73 AVDRLDGRVVDGREITV 89
A+ ++G+ VDGR+I V
Sbjct: 63 AMMAMNGKSVDGRQIRV 79
>gi|220903771|ref|YP_002479083.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219868070|gb|ACL48405.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 88
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+++ TT D+ LF +G+V+ + + DR TG +RGF FV + D+A A+
Sbjct: 4 SIYVGNLSWSTTQGDVESLFSAFGQVLSVNLISDRETGRARGFGFVEME-DDDAANAISA 62
Query: 77 LDGRVVDGREITVQFAKYGPNAER 100
LDG+ VDGR + V A+ A R
Sbjct: 63 LDGKEVDGRSLRVNKAEPKKPAAR 86
>gi|299530322|ref|ZP_07043747.1| RNA-binding region RNP-1 [Comamonas testosteroni S44]
gi|298721693|gb|EFI62625.1| RNA-binding region RNP-1 [Comamonas testosteroni S44]
Length = 113
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 41/76 (53%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ V N+ + T +L F ++G V + DR TG S+GFAFV ADE Q A+ L
Sbjct: 5 IYVGNLPYSVTDSNLRSNFAEFGTVTSAKVMMDRETGRSKGFAFVEMTSADECQAAISAL 64
Query: 78 DGRVVDGREITVQFAK 93
G VDGR I V AK
Sbjct: 65 HGMSVDGRSIVVNLAK 80
>gi|256070788|ref|XP_002571724.1| serine/arginine rich splicing factor [Schistosoma mansoni]
gi|360043150|emb|CCD78562.1| putative serine/arginine rich splicing factor [Schistosoma mansoni]
Length = 177
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Query: 6 RSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYK 65
+SGP + + L V N+ T +D+ F +YG + +I + DRRTG +G+A V Y+
Sbjct: 61 KSGPQRSVEGWILFVRNVQEEATEEDIRDKFCEYGDIKNIHLNLDRRTGYLKGYALVEYE 120
Query: 66 YADEAQKAVDRLDGRVVDGREITVQFA-KYGPN 97
EA A++ L+G ++G+ I V +A GPN
Sbjct: 121 NFKEAFTAMEHLNGSELNGQRILVDWAFTKGPN 153
>gi|449435011|ref|XP_004135289.1| PREDICTED: cold-inducible RNA-binding protein B-like isoform 1
[Cucumis sativus]
gi|449435013|ref|XP_004135290.1| PREDICTED: cold-inducible RNA-binding protein B-like isoform 2
[Cucumis sativus]
Length = 89
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L + ++ TT + L LF +G + + + RD +T +GF FV ++ EA+KA+ +
Sbjct: 9 LFISRLSSYTTLERLKNLFSPFGSISEARLIRDPKTERPKGFGFVTFQSPAEAKKALKAM 68
Query: 78 DGRVVDGREITVQFAKYG 95
DGR+VDGR I V+FAK G
Sbjct: 69 DGRIVDGRLIFVEFAKTG 86
>gi|72012128|ref|XP_784623.1| PREDICTED: uncharacterized protein LOC579411 [Strongylocentrotus
purpuratus]
Length = 341
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Query: 9 PPDIT-DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYA 67
PPD Y L V +I R +DL FD+YG + D+++ R+ GFAFV Y Y
Sbjct: 4 PPDRAFGGYRLFVGDIGTRVGKNDLEREFDRYGPITDVWVARN-----PPGFAFVVYMYR 58
Query: 68 DEAQKAVDRLDGRVVDGREITVQFAKYGP 96
++A KAV LDGR++ GR + V+ A+ P
Sbjct: 59 EDADKAVRSLDGRLMCGRRVRVEHARPYP 87
>gi|328948645|ref|YP_004365982.1| RNP-1 like RNA-binding protein [Treponema succinifaciens DSM 2489]
gi|328448969|gb|AEB14685.1| RNP-1 like RNA-binding protein [Treponema succinifaciens DSM 2489]
Length = 109
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 47/83 (56%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N+++ TT D L LF YG VV I DR T S+GF FV + E KA+ +L
Sbjct: 5 LYVGNLSYATTQDTLSSLFSAYGNVVSATIIIDRDTNQSKGFGFVEMEDPAETDKAIAKL 64
Query: 78 DGRVVDGREITVQFAKYGPNAER 100
G+ VDGR+I V +A+ ER
Sbjct: 65 AGKEVDGRKIRVNYAEEKKPRER 87
>gi|444317805|ref|XP_004179560.1| hypothetical protein TBLA_0C02300 [Tetrapisispora blattae CBS 6284]
gi|387512601|emb|CCH60041.1| hypothetical protein TBLA_0C02300 [Tetrapisispora blattae CBS 6284]
Length = 868
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 64/120 (53%), Gaps = 3/120 (2%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
++V N+ F T D+F LF +G++ + +P+ + +RGFAFV + EA+ A+D+L
Sbjct: 743 IIVKNLPFEATRKDIFELFSSFGQLKSVRVPK-KFDKSARGFAFVEFLLPKEAENAMDQL 801
Query: 78 DGRVVDGREITVQFAKYGP-NAERIKEGLLNHSRDRSTGQGVAVLGEDTEMITEIEIIEG 136
G + GR + +Q+A+ NAE E + R ++ + A + D IEI EG
Sbjct: 802 QGVHLLGRRLVMQYAEQDAVNAEEEIERMTKKVRKQAATREYAQIKNDGGR-KRIEIEEG 860
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 44/74 (59%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
I+ T L + NI + +T +D LF +G++ ++ + D RTG S+GFA+V +K +A
Sbjct: 318 ISATGRLFLRNILYTSTENDFKKLFSSFGEIDEVHVALDTRTGKSKGFAYVLFKNPADAV 377
Query: 72 KAVDRLDGRVVDGR 85
+A LD ++ GR
Sbjct: 378 QAYIELDKQIFQGR 391
Score = 48.1 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 15 TYSLLVLNITFRTTADDLFPLFDKYGKVVDIFI-----PRDRRTGDSRGFAFVRYKYADE 69
T S+ + N+ F TT L F +G V + P+D + S GF FV ++ ++
Sbjct: 639 TVSIFIKNLNFTTTTSQLVERFKSFGGFVVAQVKTKPDPKDSQRTLSMGFGFVEFRTKEQ 698
Query: 70 AQKAVDRLDGRVVDGREITVQFA 92
A ++ +DG V+DG +I ++ +
Sbjct: 699 ALAVIEAMDGSVIDGHKIQMKLS 721
Score = 40.4 bits (93), Expect = 0.91, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 42 VVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDGRVVDGREITVQFAK 93
+ D+ I +D+ G+SR FAF+ ++ D+A AVD +G +D ++ V AK
Sbjct: 39 ITDVKILKDK-NGNSRRFAFIGFRNEDDAYDAVDYFNGSYIDTAKLNVSIAK 89
>gi|90077754|dbj|BAE88557.1| unnamed protein product [Macaca fascicularis]
Length = 172
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 13 TDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+D L V ++F T L +F KYG++ ++ + +DR T SRGF FV ++ D+A+
Sbjct: 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62
Query: 73 AVDRLDGRVVDGREITV-QFAKYGPNAER 100
A+ ++G+ VDGR+I V Q K N R
Sbjct: 63 AMMAMNGKSVDGRQIRVDQAGKSSDNRSR 91
>gi|410924411|ref|XP_003975675.1| PREDICTED: cold-inducible RNA-binding protein-like [Takifugu
rubripes]
Length = 170
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 50/84 (59%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
++D L + ++F T + L F KYG + + + RD+ TG SRGF FV+Y+ ++A+
Sbjct: 1 MSDEGKLFIGGLSFETNEESLAEAFGKYGTIEKVDVIRDKETGRSRGFGFVKYESVEDAK 60
Query: 72 KAVDRLDGRVVDGREITVQFAKYG 95
A+ ++G+ +DGR I V A G
Sbjct: 61 DAMTAMNGKSLDGRAIRVDEAGKG 84
>gi|410075077|ref|XP_003955121.1| hypothetical protein KAFR_0A05510 [Kazachstania africana CBS 2517]
gi|372461703|emb|CCF55986.1| hypothetical protein KAFR_0A05510 [Kazachstania africana CBS 2517]
Length = 850
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 45/74 (60%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
I +T L + NI + +T DD LF K+G++ +I + D RTG S+GFA+V +K +A
Sbjct: 305 IQETGRLFLRNILYTSTEDDFKALFGKFGELEEIHVALDTRTGQSKGFAYVLFKNPQDAV 364
Query: 72 KAVDRLDGRVVDGR 85
+A LD ++ GR
Sbjct: 365 QAYIELDKQIFQGR 378
Score = 57.0 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
++V N+ F T D+F LF+ +G++ + +P+ + +RGFAFV + EA+ A+D+L
Sbjct: 725 IIVKNLPFEATRKDVFELFNSFGQLKSVRVPK-KFDKSARGFAFVEFLLPKEAEAAMDQL 783
Query: 78 DGRVVDGREITVQFAKY-GPNAE 99
G + GR + +Q+A+ NAE
Sbjct: 784 QGVHLLGRRLVMQYAQQDAENAE 806
Score = 42.0 bits (97), Expect = 0.28, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 15 TYSLLVLNITFRTTADDLFPLFDKYGKVVDIFI---PRDRRTGD--SRGFAFVRYKYADE 69
T S+ + N+ F TT+ L F ++ V + P + G S GF FV ++ ++
Sbjct: 622 TVSVFIKNLNFSTTSAQLNDKFSQFSGFVIAQVKTKPDSKHPGKTVSMGFGFVEFRTKEQ 681
Query: 70 AQKAVDRLDGRVVDGREITVQFA 92
A + LDG V+DG +I ++ +
Sbjct: 682 ANAVIAALDGTVIDGHKIQLKLS 704
>gi|300121123|emb|CBK21504.2| unnamed protein product [Blastocystis hominis]
Length = 302
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Query: 6 RSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYK 65
++ P + DT +++ ++ + D L F KYG + + + +DR++G SRG VR+
Sbjct: 98 QAAPKEFIDTNKIIITSLAWSVNDDSLRQAFSKYGNLEECTVLKDRQSGKSRGRGIVRFA 157
Query: 66 YADEAQKAVDRLDGRVVDGREITV-QFAKYGPNAERIKE 103
+ +KA++ ++G ++GR I V QF AE+ KE
Sbjct: 158 TEEAMKKAIEEMNGTELEGRAIAVRQFLPKSQMAEKAKE 196
>gi|291287189|ref|YP_003504005.1| RNP-1 like RNA-binding protein [Denitrovibrio acetiphilus DSM
12809]
gi|290884349|gb|ADD68049.1| RNP-1 like RNA-binding protein [Denitrovibrio acetiphilus DSM
12809]
Length = 94
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 2/94 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V N+++ ++ D+LF LF+ G+V I DR TG S+GF FV A++A+ A+++
Sbjct: 2 NIYVGNLSYTSSEDELFELFENMGQVDSARIITDRDTGRSKGFGFVEMADAEQAKAAIEQ 61
Query: 77 LDGRVVDGREITVQFAKYGPNAERIKEGLLNHSR 110
L+G GR +TV AK P G N+ R
Sbjct: 62 LNGTEFGGRNLTVNEAK--PRNNDRSGGGFNNRR 93
>gi|255573485|ref|XP_002527668.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223532973|gb|EEF34739.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 278
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
+ T L V N+ + + D+ LF + G V D+ I + ++ G SRGFAFV +EA
Sbjct: 78 ETTQKRKLYVFNLPWSLSVVDIKNLFGQCGTVTDVEIIK-QKNGRSRGFAFVTLASGEEA 136
Query: 71 QKAVDRLDGRVVDGREITVQFAK 93
Q A+D+LD V GR I V+FAK
Sbjct: 137 QAAIDKLDSHEVSGRIIRVEFAK 159
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 39/77 (50%)
Query: 16 YSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVD 75
+ + V N+ ++ + L F V + D TG S G+ FV + +EA+ A+
Sbjct: 179 HKIYVSNLAWKVRSTHLREFFSTNFSPVSSRVVFDSPTGRSSGYGFVSFATREEAEAAIS 238
Query: 76 RLDGRVVDGREITVQFA 92
LDG+ + GR + ++F+
Sbjct: 239 ALDGKELMGRPLRLKFS 255
>gi|384488552|gb|EIE80732.1| hypothetical protein RO3G_05437 [Rhizopus delemar RA 99-880]
Length = 238
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 49/77 (63%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L + +T RT DL +F KYGKV+ I D T +SRGF F+R A++A++A++
Sbjct: 62 NLFITGLTIRTNGADLEDIFGKYGKVIKAEIMYDPHTRESRGFGFIRMANAEDAERALNG 121
Query: 77 LDGRVVDGREITVQFAK 93
+ G +DGR +TV+ AK
Sbjct: 122 VSGTEIDGRVVTVEKAK 138
>gi|145298735|ref|YP_001141576.1| RNA-binding protein [Aeromonas salmonicida subsp. salmonicida A449]
gi|142851507|gb|ABO89828.1| RNA-binding protein [Aeromonas salmonicida subsp. salmonicida A449]
Length = 92
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKV--VDIFIPRDRRTGDSRGFAFVRYKYADEAQKAV 74
+ V N+++R TAD+L +F ++G+V VDI I RD TG S+GF F+ +A+KA+
Sbjct: 2 KIYVGNLSYRMTADELTTVFSQFGQVDKVDIIIDRD--TGQSKGFGFIEMPVNGDAEKAI 59
Query: 75 DRLDGRVVDGREITVQFAKYGPNAER 100
L G + GR ITV AK +A R
Sbjct: 60 AGLHGTEIGGRTITVNQAKPKTDAPR 85
>gi|449441097|ref|XP_004138320.1| PREDICTED: uncharacterized protein LOC101218446 [Cucumis sativus]
Length = 232
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 46/80 (57%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
++ + V I+F T L F KYG+V++ + DR TG SRGF FV Y ++EA A
Sbjct: 41 ESSKVFVGGISFSTDDQSLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSA 100
Query: 74 VDRLDGRVVDGREITVQFAK 93
+ LDG+ + GR + V +A
Sbjct: 101 IQALDGQDLHGRRVRVNYAN 120
>gi|428185150|gb|EKX54003.1| hypothetical protein GUITHDRAFT_132430 [Guillardia theta CCMP2712]
Length = 162
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 47/83 (56%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
D + L V I F +++DL F+K+G V D ++ +DR TG SRGFAF+ + + A
Sbjct: 54 DKINDKKLFVSGIPFALSSEDLRETFEKFGPVEDSYVVKDRETGRSRGFAFITFSSKEAA 113
Query: 71 QKAVDRLDGRVVDGREITVQFAK 93
+A L+ + GR + V FAK
Sbjct: 114 SQACSALNESDLGGRTVKVSFAK 136
>gi|407039238|gb|EKE39532.1| RNA recognition motif domain containing protein [Entamoeba nuttalli
P19]
Length = 697
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ + N+ F T DD+ FD++G + +I +P D+ T S+GF FV + +A KA + +
Sbjct: 188 IYITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFVLFVVPQDAVKACNEM 247
Query: 78 DGRVVDGREITVQFAKYGP 96
D + + GR + V +AK P
Sbjct: 248 DNKFIKGRIVHVTYAKADP 266
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 15 TYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPR--DRRTGDSRGFAFVRYKYADEAQK 72
+ +L V NI+F+T D + +F+K G+V+ + + + D++ + GF FV Y ++A
Sbjct: 515 SKTLYVKNISFKTKEDVIRKVFEKCGRVLAVTLSKTKDKKVEKNSGFGFVEYAKHEDAIN 574
Query: 73 AVDRLDGRVVDGREITVQFAK 93
A+ L G+V+DG + ++ ++
Sbjct: 575 AIKTLQGKVIDGHAVQIEISQ 595
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 15 TYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAV 74
+ LLV N+ F T ++ LF YG + + +P+ + G ++GFAFV Y EA A+
Sbjct: 615 SNKLLVKNVPFETNIKEVRELFRTYGTLRGVRLPK-KVDGQNKGFAFVEYATKQEAANAM 673
Query: 75 DRLDGRVVDGREITVQFAK 93
L GR + +++AK
Sbjct: 674 AALKNSHFYGRHLIIEYAK 692
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+++ N+ R L F+K+G + D + R + G+SR F F+ ++ D+AQ A+ ++
Sbjct: 4 IIIKNLPERADEKILKQQFEKFGGITDCKVMRTPQ-GNSRKFGFIGFENEDQAQTAITKM 62
Query: 78 DGRVVDGREITVQFAK 93
+G + ++ V AK
Sbjct: 63 NGAYIQSSKLQVSLAK 78
>gi|302792100|ref|XP_002977816.1| ATP-binding cassette transporter, subfamily C, member 19, SmABCC19
[Selaginella moellendorffii]
gi|300154519|gb|EFJ21154.1| ATP-binding cassette transporter, subfamily C, member 19, SmABCC19
[Selaginella moellendorffii]
Length = 1494
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D SL V N++ T DL LF ++G + IF+ DR TG RGFAF+ + ++A++A
Sbjct: 1401 DGNSLRVTNLSEDTREADLQELFGRFGSISRIFVASDRETGLGRGFAFITFVRREDAERA 1460
Query: 74 VDRLDGRVVDGREITVQFAKYGPNAERIKE 103
+ +LDG D + V++A P +KE
Sbjct: 1461 MKKLDGYGYDSLILHVEWA--APRERPVKE 1488
>gi|161408091|dbj|BAF94149.1| cold-inducible RNA binding protein [Alligator mississippiensis]
Length = 165
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Query: 13 TDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+D L V ++F T L +F KYG++ ++ + +DR T SRGF FV ++ D+A+
Sbjct: 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62
Query: 73 AVDRLDGRVVDGREITV-QFAKYGPNAERIKEG 104
A+ ++G+ VDGR+I V Q K N R G
Sbjct: 63 AMMAMNGKSVDGRQIRVDQAGKSSENRSRGYRG 95
>gi|356553015|ref|XP_003544854.1| PREDICTED: uncharacterized protein LOC100775883 isoform 1 [Glycine
max]
gi|356553017|ref|XP_003544855.1| PREDICTED: uncharacterized protein LOC100775883 isoform 2 [Glycine
max]
Length = 249
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL F ++G + DI++P+D TG+ RGF FV+Y +A A
Sbjct: 42 SLLVRNLRHDCRPEDLRRPFGQFGPLKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKYH 101
Query: 77 LDGRVVDGREITVQFAK 93
+DG+V+ GRE+TV FA+
Sbjct: 102 MDGQVLLGRELTVVFAE 118
>gi|326503656|dbj|BAJ86334.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 268
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ V N+++ L LF++ G V+ + DR +G SRGF FV Y +DE QKAV L
Sbjct: 185 VYVGNLSWNVDDSALANLFNEQGSVLGARVIYDRESGRSRGFGFVTYGTSDEVQKAVSNL 244
Query: 78 DGRVVDGREITVQFAK 93
DG +DGR+I V A+
Sbjct: 245 DGTDMDGRQIRVTVAE 260
Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 50/99 (50%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
+ ++ + V N+ F + L LF++ G V + + D+ TG SRGF FV +E
Sbjct: 69 EFSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEV 128
Query: 71 QKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLLNHS 109
++AV+RL+G V+DGR + V P + G S
Sbjct: 129 EEAVERLNGYVLDGRALKVNSGPPPPKDQSSPRGFREQS 167
>gi|303285796|ref|XP_003062188.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456599|gb|EEH53900.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 292
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D S+ V N++ T DL LF +G V I++ +R TG+SRGFAFV + D+A +A
Sbjct: 207 DENSVRVSNLSEDTREQDLQELFRPFGPVTRIYVAFNRETGESRGFAFVNFVNKDDANRA 266
Query: 74 VDRLDGRVVDGREITVQFAKYGPNAER 100
+ +LDG D + V++A P ER
Sbjct: 267 ISKLDGYGYDNLILRVEWA--APREER 291
>gi|432101154|gb|ELK29438.1| Cold-inducible RNA-binding protein [Myotis davidii]
Length = 204
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Query: 13 TDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+D L V ++F T L +F KYG++ ++ + +DR T SRGF FV ++ D+A+
Sbjct: 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62
Query: 73 AVDRLDGRVVDGREITV-QFAKYGPNAERIKEG 104
A+ ++G+ VDGR+I V Q K N R G
Sbjct: 63 AMMAMNGKSVDGRQIRVDQAGKSSDNRSRGYRG 95
>gi|156841314|ref|XP_001644031.1| hypothetical protein Kpol_1026p21 [Vanderwaltozyma polyspora DSM
70294]
gi|156114664|gb|EDO16173.1| hypothetical protein Kpol_1026p21 [Vanderwaltozyma polyspora DSM
70294]
Length = 437
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
P +DT L + N++F D ++ LF K+G+++ + +P T +GF +V+Y +
Sbjct: 274 PSQPSDT--LFLGNLSFNADRDQIYELFSKHGEIISVRLPTHPETEQPKGFGYVQYGNVN 331
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYGPN 97
+AQ A+D L G +D R + + F+ PN
Sbjct: 332 DAQSALDALQGEYIDNRPVRLDFSTPKPN 360
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 42/83 (50%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
+T ++ V +++ + L F+ G V+ + +R T SRG+ +V + A++A
Sbjct: 176 ETATIFVGRLSWSVDDEWLKNEFEHIGDVIGARVIYERGTDRSRGYGYVDFSSKSAAERA 235
Query: 74 VDRLDGRVVDGREITVQFAKYGP 96
V + G+ +DGREI + P
Sbjct: 236 VKEMHGKQIDGREINCDMSTSKP 258
>gi|345320496|ref|XP_001519931.2| PREDICTED: hypothetical protein LOC100090925, partial
[Ornithorhynchus anatinus]
Length = 369
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 3 HFGRSGPPD-ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAF 61
HF G P I D SL + ++DL F +YG +VD+++P D T RGFA+
Sbjct: 75 HFSAVGDPGPIDDAGSLRCVPAFVLERSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAY 134
Query: 62 VRYKYADEAQKAVDRLDGRVVDGREITVQFAK 93
V+++ +A+ A+ LD + + GR+I +QFA+
Sbjct: 135 VQFEDVRDAEDALHNLDRKWICGRQIEIQFAQ 166
>gi|313231155|emb|CBY19153.1| unnamed protein product [Oikopleura dioica]
gi|313242052|emb|CBY34232.1| unnamed protein product [Oikopleura dioica]
Length = 266
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL V NI D+L F +YG + D++IPRD RGFA+V++ +A+ A +
Sbjct: 12 SLFVRNIADDIDQDELTREFSRYGSIKDVYIPRDYYNKRPRGFAYVQFADIHDAEDAQEG 71
Query: 77 LDGRVVDGREITVQFAK 93
+DGR V GR I VQFAK
Sbjct: 72 MDGRKVCGRFIDVQFAK 88
>gi|388857428|emb|CCF48936.1| related to TIF35-translation initiation factor eIF3 subunit
[Ustilago hordei]
Length = 310
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 49/76 (64%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V N++ +DL LF ++G+VV +++ RDR TG +G+AFV ++ +EA +A R
Sbjct: 228 TLRVTNLSEDADDEDLRVLFGRFGRVVRVYVGRDRETGICKGYAFVSFEDREEADRARQR 287
Query: 77 LDGRVVDGREITVQFA 92
+DGR D ++ Q++
Sbjct: 288 IDGRGYDNLILSCQWS 303
>gi|348550387|ref|XP_003461013.1| PREDICTED: LOW QUALITY PROTEIN: cold-inducible RNA-binding
protein-like [Cavia porcellus]
Length = 173
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 48/77 (62%)
Query: 13 TDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+D L + ++F T L +F KYG++ ++ + +DR T SRGF FV ++ D+A+
Sbjct: 3 SDEGKLFIGGLSFDTNEQSLEEVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKD 62
Query: 73 AVDRLDGRVVDGREITV 89
A+ ++G+ VDGR+I V
Sbjct: 63 AMMAMNGKSVDGRQIRV 79
>gi|300176090|emb|CBK23401.2| unnamed protein product [Blastocystis hominis]
Length = 259
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 38/59 (64%)
Query: 35 LFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDGRVVDGREITVQFAK 93
+F KYG V D+ IPRD T RGFAF+ ++ ++A+ A+ LDGR V G ++V AK
Sbjct: 121 IFSKYGNVHDVHIPRDYYTHKQRGFAFIEFENREQAEDAISHLDGRSVCGSTVSVSIAK 179
>gi|226492142|ref|NP_001148607.1| ribonucleoprotein A precursor [Zea mays]
gi|195620768|gb|ACG32214.1| ribonucleoprotein A [Zea mays]
Length = 264
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D + V N+++ L LF + G+V++ I DR +G SRGF FV Y A+E + A
Sbjct: 177 DANRVYVGNLSWGVDNSALANLFSEQGEVLEARIIYDRESGRSRGFGFVTYGSAEEVENA 236
Query: 74 VDRLDGRVVDGREITVQFAKYGP 96
+ LDG +DGR+I V A+ P
Sbjct: 237 ISNLDGADLDGRQIRVTVAESKP 259
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%)
Query: 5 GRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRY 64
GRSG + +D + V N+ F + L LF++ G V + + D+ TG SRGF FV
Sbjct: 72 GRSGGDEFSDDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTM 131
Query: 65 KYADEAQKAVDRLDGRVVDGREITVQ 90
+E + AVD+ +G V+DGR + V
Sbjct: 132 SSVEEVEVAVDQFNGYVLDGRSLRVN 157
>gi|6911144|gb|AAF31403.1|AF200322_1 putative glycine-rich RNA binding protein 3 [Catharanthus roseus]
Length = 164
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%)
Query: 16 YSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVD 75
Y V + + TT L F +YG++++ I DR TG SRGF FV +K + A++
Sbjct: 8 YRCFVGGLAWATTDQSLSEAFSQYGEILESKIINDRETGRSRGFGFVTFKDEQSMRDAIE 67
Query: 76 RLDGRVVDGREITVQFAK 93
++G+ +DGR ITV A+
Sbjct: 68 GMNGQTLDGRNITVNEAQ 85
>gi|77735511|ref|NP_001029450.1| cold-inducible RNA-binding protein [Bos taurus]
gi|74353851|gb|AAI02774.1| Cold inducible RNA binding protein [Bos taurus]
gi|296485364|tpg|DAA27479.1| TPA: cold inducible RNA binding protein [Bos taurus]
Length = 213
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Query: 13 TDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+D L V ++F T L +F KYG++ ++ + +DR T SRGF FV ++ D+A+
Sbjct: 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62
Query: 73 AVDRLDGRVVDGREITV-QFAKYGPNAERIKEG 104
A+ ++G+ VDGR+I V Q K N R G
Sbjct: 63 AMMAMNGKSVDGRQIRVDQAGKSSDNRSRGYRG 95
>gi|357152879|ref|XP_003576265.1| PREDICTED: glycine-rich RNA-binding protein blt801-like
[Brachypodium distachyon]
Length = 165
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D Y V + + T +L F +G+++D I +DR TG SRGF FV + + Q A
Sbjct: 2 DEYRCFVGGLAWATDDHNLQSAFSNFGEILDAKIIQDRETGRSRGFGFVTFATEESMQAA 61
Query: 74 VDRLDGRVVDGREITVQFAK 93
++ ++G+ +DGR ITV A+
Sbjct: 62 IEGMNGKELDGRSITVNQAQ 81
>gi|330937139|ref|XP_003305556.1| hypothetical protein PTT_18431 [Pyrenophora teres f. teres 0-1]
gi|311317390|gb|EFQ86366.1| hypothetical protein PTT_18431 [Pyrenophora teres f. teres 0-1]
Length = 283
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%)
Query: 8 GPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYA 67
G D D+ +L V N++ DL +F +YG V +F+ +DR TG ++GFAFV Y
Sbjct: 196 GKFDRDDSATLRVTNVSEFAEEQDLRDMFSRYGHVTRVFLAKDRETGRAKGFAFVSYADR 255
Query: 68 DEAQKAVDRLDGRVVDGREITVQFAK 93
+A KA +++DG + V+FAK
Sbjct: 256 SDAAKACEKMDGFGFGHLILRVEFAK 281
>gi|149392545|gb|ABR26075.1| chloroplast 29 kDa ribonucleoprotein [Oryza sativa Indica Group]
Length = 205
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 47/91 (51%)
Query: 6 RSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYK 65
R G + + L V N+ + L LF + G V+D + DR +G SRGF FV Y
Sbjct: 111 RGGGSNFDSSNKLYVGNLAWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSRGFGFVTYG 170
Query: 66 YADEAQKAVDRLDGRVVDGREITVQFAKYGP 96
A+E A+ LDG +DGR+I V A+ P
Sbjct: 171 SAEEVNNAISNLDGVDLDGRQIRVTVAESKP 201
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ V N+ F + L LF++ G V + + DR+TG SRGF FV A+EA A+++
Sbjct: 23 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAIEQF 82
Query: 78 DGRVVDGREITVQ 90
+G GR + V
Sbjct: 83 NGYTFQGRPLRVN 95
>gi|213402769|ref|XP_002172157.1| RNA-binding protein [Schizosaccharomyces japonicus yFS275]
gi|212000204|gb|EEB05864.1| RNA-binding protein [Schizosaccharomyces japonicus yFS275]
Length = 213
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 58/101 (57%), Gaps = 5/101 (4%)
Query: 4 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVR 63
+ RS P + ++L+ NIT T + + +F YG + DI P R++ + +G+ +V
Sbjct: 48 YSRSPSPRRYSS-TILIENITRNVTKEHINEIFGAYGTIDDIDFPLFRKSHEPKGYCYVT 106
Query: 64 YKYADEAQKAVDRLDGRVVDGREITV----QFAKYGPNAER 100
Y YAD+A+ AVDR++ ++DG E+ V Q KYG ER
Sbjct: 107 YAYADQAETAVDRMNSGMLDGEELFVSLQEQPQKYGDRRER 147
>gi|428768443|ref|YP_007160233.1| RNP-1 like RNA-binding protein [Cyanobacterium aponinum PCC
10605]
gi|428682722|gb|AFZ52189.1| RNP-1 like RNA-binding protein [Cyanobacterium aponinum PCC
10605]
Length = 81
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/77 (40%), Positives = 45/77 (58%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+++ + +DL +F YG+V +++P DR T RGF FV DE KA++
Sbjct: 2 SIYVGNLSYDISENDLQSVFADYGEVKRVYLPLDRETKRKRGFGFVEMSNDDEEIKAIET 61
Query: 77 LDGRVVDGREITVQFAK 93
LDG GR+I V AK
Sbjct: 62 LDGAQWMGRQIKVNKAK 78
>gi|384252135|gb|EIE25612.1| hypothetical protein COCSUDRAFT_83619, partial [Coccomyxa
subellipsoidea C-169]
Length = 207
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 49/81 (60%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V N+ T+ L F++YG+V+ + + TG S+GF FV++ A +A+ A+ +
Sbjct: 36 TIFVGNLNHETSERRLREFFEEYGRVLSTKVVFNPETGRSKGFGFVKFDDARDAEDAIKQ 95
Query: 77 LDGRVVDGREITVQFAKYGPN 97
DG+ +DGR I FAKY P+
Sbjct: 96 ADGQTMDGRTIKCNFAKYQPH 116
>gi|256421371|ref|YP_003122024.1| RNP-1 like RNA-binding protein [Chitinophaga pinensis DSM 2588]
gi|256036279|gb|ACU59823.1| RNP-1 like RNA-binding protein [Chitinophaga pinensis DSM 2588]
Length = 108
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V N+ +R DL +F ++G+V I +D TG SRGF FV +E KA+D
Sbjct: 2 NIYVANLHYRLNDADLHQIFSEFGEVTSAKIIKDHETGRSRGFGFVEMPNQEEGSKAMDS 61
Query: 77 LDGRVVDGREITVQFAK 93
L+G ++G+++ V A+
Sbjct: 62 LNGTEIEGKQLMVNEAR 78
>gi|449468518|ref|XP_004151968.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
gi|449496932|ref|XP_004160266.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
Length = 174
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V ++ RTT + L F K+G+V + DR TG S+GF FV+Y ++A K ++
Sbjct: 80 NLFVSGLSKRTTTEKLHEAFAKFGEVAHARVVTDRVTGYSKGFGFVKYATLEDAAKGIEG 139
Query: 77 LDGRVVDGREITVQFAKYGPNAE 99
+DG+ +DG I ++A+ P E
Sbjct: 140 MDGKFLDGWVIFAEYARPRPPPE 162
>gi|254580399|ref|XP_002496185.1| ZYRO0C12452p [Zygosaccharomyces rouxii]
gi|238939076|emb|CAR27252.1| ZYRO0C12452p [Zygosaccharomyces rouxii]
Length = 866
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 47/74 (63%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
I++T L + NI + +T DD LF K+G++ ++ I D RTG S+GFA+V++K +A
Sbjct: 327 ISETGRLFLRNILYGSTEDDFKELFGKFGELEEVHIALDTRTGQSKGFAYVQFKDPKDAV 386
Query: 72 KAVDRLDGRVVDGR 85
+A LD ++ GR
Sbjct: 387 EAYIELDKQIFQGR 400
Score = 53.5 bits (127), Expect = 8e-05, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Query: 5 GRSGPPDITDTYS--LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFV 62
G + P T S ++V N+ F D+F LF +G++ + +P+ + +RGFAFV
Sbjct: 727 GSTNAPKQTRKKSGKIIVKNLPFEAARKDVFELFSSFGQLKSVRVPK-KFDKSARGFAFV 785
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFAK 93
+ EA+ A+D+L G + GR + +Q+A+
Sbjct: 786 EFLLPKEAENAMDQLQGVHLLGRRLVMQYAQ 816
Score = 37.7 bits (86), Expect = 4.7, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 10/93 (10%)
Query: 5 GRSGPPDITDTYSLLVLNITFRTTADDL---FPLFDKYGKVVDIFIPRDRRTGD--SRGF 59
G GP T S+ V N+ F TT L F FD + P TG S GF
Sbjct: 635 GFEGP-----TASIFVKNLNFATTTQQLAEKFKPFDGFVVAQVKTKPDPSNTGKVLSMGF 689
Query: 60 AFVRYKYADEAQKAVDRLDGRVVDGREITVQFA 92
FV +K +A ++ LDG +DG ++ ++ +
Sbjct: 690 GFVEFKSRAQAVAVINALDGTALDGHKLQLKLS 722
Score = 37.4 bits (85), Expect = 6.0, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 35 LFDKYGK------VVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDGRVVDGREIT 88
L DKY + D+ I +DR G SR FAF+ Y+ D+A+ AV +D I
Sbjct: 26 LVDKYSSTNVGNLITDLKILKDR-DGQSRRFAFIGYRNEDDAKDAVQFFHRTFIDATRID 84
Query: 89 VQFAK 93
V AK
Sbjct: 85 VSMAK 89
>gi|414866997|tpg|DAA45554.1| TPA: ribonucleoprotein A [Zea mays]
Length = 262
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D + V N+++ L LF + G+V++ I DR +G SRGF FV Y A+E + A
Sbjct: 175 DANRVYVGNLSWGVDNSALANLFSEQGEVLEARIIYDRESGRSRGFGFVTYGSAEEVENA 234
Query: 74 VDRLDGRVVDGREITVQFAKYGP 96
+ LDG +DGR+I V A+ P
Sbjct: 235 ISNLDGADLDGRQIRVTVAESKP 257
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%)
Query: 5 GRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRY 64
GRSG + +D + V N+ F + L LF++ G V + + D+ TG SRGF FV
Sbjct: 70 GRSGGDEFSDDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTM 129
Query: 65 KYADEAQKAVDRLDGRVVDGREITVQ 90
+E + AVD+ +G V+DGR + V
Sbjct: 130 SSVEEVEVAVDQFNGYVLDGRSLRVN 155
>gi|359463214|ref|ZP_09251777.1| RNA-binding protein [Acaryochloris sp. CCMEE 5410]
Length = 99
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 43/77 (55%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ + N++F T DL +F +YG V + +P DR TG RGFAFV E KA+D
Sbjct: 12 SIYIGNLSFDATEQDLNAVFAEYGTVKQVKMPTDRETGRKRGFAFVEMGNDAEEAKAIDE 71
Query: 77 LDGRVVDGREITVQFAK 93
L+G GR + V AK
Sbjct: 72 LEGAEWMGRTLKVNKAK 88
>gi|12835985|dbj|BAB23448.1| unnamed protein product [Mus musculus]
Length = 590
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
D+ D+ L V N+++ ++ +DL LF YG + ++ P D T +GFAFV + + + A
Sbjct: 33 DLADSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHA 92
Query: 71 QKAVDRLDGRVVDGREITV 89
KA +DG+V GR + V
Sbjct: 93 VKAYAEVDGQVFQGRMLHV 111
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGD---SRGFAFVRYKYADEAQKA 73
+L + N+ F TT + L +F K G + I + + S GF FV YK ++AQKA
Sbjct: 361 TLFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKA 420
Query: 74 VDRLDGRVVDGREITVQFAK 93
+ +L G VDG ++ V+ ++
Sbjct: 421 LKQLQGHTVDGHKLEVRISE 440
>gi|326493798|dbj|BAJ85361.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 175
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%)
Query: 16 YSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVD 75
Y V + + T +L F +YG+++D I DR TG SRGF FV + + ++A++
Sbjct: 6 YRCFVGGLAWATDDHNLQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMRQAIE 65
Query: 76 RLDGRVVDGREITVQFAK 93
++G+ +DGR ITV A+
Sbjct: 66 EMNGKELDGRSITVNEAQ 83
>gi|189210555|ref|XP_001941609.1| translation initiation factor eIF3g [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187977702|gb|EDU44328.1| translation initiation factor eIF3g [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 283
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%)
Query: 8 GPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYA 67
G D D+ +L V N++ DL +F +YG V +F+ +DR TG ++GFAFV Y
Sbjct: 196 GKFDRDDSATLRVTNVSEFAEEQDLRDMFSRYGHVTRVFLAKDRETGRAKGFAFVSYADR 255
Query: 68 DEAQKAVDRLDGRVVDGREITVQFAK 93
+A KA +++DG + V+FAK
Sbjct: 256 SDAAKACEKMDGFGFGHLILRVEFAK 281
>gi|124804262|ref|XP_001347950.1| conserved Plasmodium protein [Plasmodium falciparum 3D7]
gi|23496204|gb|AAN35863.1| conserved Plasmodium protein [Plasmodium falciparum 3D7]
Length = 914
Score = 59.3 bits (142), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 47/77 (61%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+L+ N+ + T+ D + +F+ GKV D+++P D T RGF FV Y + A++A++
Sbjct: 7 SILIRNLNYDTSPDKVRKIFENVGKVKDVYLPLDHYTRKPRGFGFVEYFESKYAKEAINI 66
Query: 77 LDGRVVDGREITVQFAK 93
L+ +DG EI + A+
Sbjct: 67 LNHSRIDGNEIRIIIAQ 83
>gi|406944721|gb|EKD76419.1| hypothetical protein ACD_43C00118G0001 [uncultured bacterium]
Length = 84
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 44/77 (57%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V I F++T D L F + G VV I D+ TG SRGF FV +EAQ A+
Sbjct: 4 NLFVGGIAFKSTDDTLREAFMQAGNVVSAKIIMDKMTGRSRGFGFVEMSTPEEAQAAIQM 63
Query: 77 LDGRVVDGREITVQFAK 93
DG+ +DGR I V+ A+
Sbjct: 64 WDGKELDGRRIAVKEAQ 80
>gi|344282129|ref|XP_003412827.1| PREDICTED: transformer-2 protein homolog beta-like [Loxodonta
africana]
Length = 390
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + D+ I D+++ SRGFAFV
Sbjct: 201 HVGNRANPDPNCC--LGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFV 258
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D+A++A +R +G +DGR I V F+
Sbjct: 259 YFENVDDAKEAKERANGMELDGRRIRVDFS 288
>gi|449442606|ref|XP_004139072.1| PREDICTED: serine/arginine-rich splicing factor 33-like [Cucumis
sativus]
gi|449528235|ref|XP_004171111.1| PREDICTED: serine/arginine-rich splicing factor 33-like [Cucumis
sativus]
Length = 285
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N++ +DL F ++G + DI++P+D TG+ RGF FV+Y +A A
Sbjct: 37 SLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHH 96
Query: 77 LDGRVVDGREITVQFAK 93
+DG V+ GRE+TV FA+
Sbjct: 97 MDGCVLLGRELTVVFAE 113
>gi|330914835|ref|XP_003296804.1| hypothetical protein PTT_06993 [Pyrenophora teres f. teres 0-1]
gi|311330893|gb|EFQ95099.1| hypothetical protein PTT_06993 [Pyrenophora teres f. teres 0-1]
Length = 326
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 55/94 (58%), Gaps = 2/94 (2%)
Query: 6 RSGPPDITDTYSLLVL-NITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRY 64
R+ P T+ +L + N+ + TAD L +F ++G+V + I D R G SRGF +V +
Sbjct: 125 RTNAPRSTEPNKMLYIGNLYYEVTADQLKRVFSRFGEVESVKIVYDNR-GLSRGFGYVEF 183
Query: 65 KYADEAQKAVDRLDGRVVDGREITVQFAKYGPNA 98
+AQ A+D LD +V +GR + VQ+ + PN+
Sbjct: 184 GNLADAQAAIDNLDMQVFEGRNMVVQYHQPKPNS 217
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 50/90 (55%)
Query: 13 TDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
T + +L + N++F + DL LF V+D+ + DRRTG RGFA + A K
Sbjct: 230 TPSKTLFIGNMSFEMSDKDLNDLFRDIRNVMDVRVAIDRRTGQPRGFAHADFIDVASATK 289
Query: 73 AVDRLDGRVVDGREITVQFAKYGPNAERIK 102
A + L +++ GR++ + ++K G + +R K
Sbjct: 290 AKEVLSEKIIYGRQLRIDYSKSGTSEQRGK 319
>gi|242080387|ref|XP_002444962.1| hypothetical protein SORBIDRAFT_07g001980 [Sorghum bicolor]
gi|241941312|gb|EES14457.1| hypothetical protein SORBIDRAFT_07g001980 [Sorghum bicolor]
Length = 290
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 50/85 (58%)
Query: 13 TDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
D S+ V N++ T DL LF +G V +++ D++TG SRGF FV + + ++A+K
Sbjct: 206 NDENSVRVTNLSEDTREPDLLELFRAFGPVSRVYVAVDQKTGSSRGFGFVNFVHREDAEK 265
Query: 73 AVDRLDGRVVDGREITVQFAKYGPN 97
A+ +L+G D + V++A PN
Sbjct: 266 AISKLNGYGYDNLILRVEWATPRPN 290
>gi|121702823|ref|XP_001269676.1| pre-rRNA processing protein Mrd1, putative [Aspergillus clavatus
NRRL 1]
gi|119397819|gb|EAW08250.1| pre-rRNA processing protein Mrd1, putative [Aspergillus clavatus
NRRL 1]
Length = 822
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 41/68 (60%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N+ + DL P+F KYGKV +I + D R+ S+GFA+V+Y AD A +A L
Sbjct: 300 LFVRNLPYDAKESDLEPIFSKYGKVEEIHVAFDTRSTTSKGFAYVQYFDADAAVQAYKEL 359
Query: 78 DGRVVDGR 85
DG+ GR
Sbjct: 360 DGKHFQGR 367
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 9/86 (10%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPR--DRRTGDSRGFAFVRYKYADEAQKAVD 75
+++ N+ F+ T D+ LF YG++ + +P+ DR +RGF F + A EA+ A+D
Sbjct: 701 IIIKNLPFQATKKDVRSLFGAYGQLRSVRVPQKFDR---SARGFGFADFVSAREAENAMD 757
Query: 76 RLDGRVVDGREITVQFAKYGPNAERI 101
L + GR + ++FA NAE I
Sbjct: 758 ALKNTHLLGRRLVLEFA----NAEAI 779
>gi|426247328|ref|XP_004017438.1| PREDICTED: probable RNA-binding protein 19 [Ovis aries]
Length = 916
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 46/79 (58%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
D+ D+ L V N+ + ++ +DL LF +YG + ++ P D T +GFAFV + + + A
Sbjct: 355 DLADSGRLFVRNLPYTSSEEDLEKLFSRYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHA 414
Query: 71 QKAVDRLDGRVVDGREITV 89
KA +DG+V GR + V
Sbjct: 415 VKAYAEVDGQVFQGRMLHV 433
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGD---SRGFAFVRYKYADEAQKA 73
+L + N+ F TT + L +F K G V I + + S GF FV Y+ ++AQKA
Sbjct: 687 TLFIKNLNFDTTEETLKGVFSKVGAVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKA 746
Query: 74 VDRLDGRVVDGREITVQFAK 93
+ +L G VVDG ++ V+ ++
Sbjct: 747 LKQLQGHVVDGHKLEVRISE 766
Score = 39.3 bits (90), Expect = 2.0, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L+V N+ + LF +G + D + + + G R F F+ +K +EAQ A++
Sbjct: 4 LIVKNLPNGMKEERFRQLFTAFGTLTDCSL-KFTKDGKFRKFGFIGFKSEEEAQTALNHF 62
Query: 78 DGRVVDGREITVQFAK 93
+ +D ITV+F K
Sbjct: 63 NKSFIDTSRITVEFCK 78
>gi|358059890|dbj|GAA94320.1| hypothetical protein E5Q_00970 [Mixia osmundae IAM 14324]
Length = 173
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V + + TT D LF F +YG+V D + +DR TG SRGF FV A++A++ L
Sbjct: 23 LFVGGLAWATTDDSLFSAFSQYGEVTDCIVMKDRETGRSRGFGFVTMSDPAAAEQAIEAL 82
Query: 78 DGRVVDGREITV 89
+ +DGR++ V
Sbjct: 83 NNGDLDGRQVRV 94
>gi|224105333|ref|XP_002313773.1| predicted protein [Populus trichocarpa]
gi|222850181|gb|EEE87728.1| predicted protein [Populus trichocarpa]
Length = 974
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 48/80 (60%)
Query: 13 TDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
T + L++ N+ F+ +++ +F+ G V D+F+P + TG S+GFAFV++ +A+
Sbjct: 277 TQKWKLIIRNLPFKAKPNEIKGVFESAGCVWDVFVPHNSETGLSKGFAFVKFTCKQDAEN 336
Query: 73 AVDRLDGRVVDGREITVQFA 92
A+ + +G+ R I V +A
Sbjct: 337 AIQKFNGQKFGKRPIAVDWA 356
Score = 45.1 bits (105), Expect = 0.036, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 44/84 (52%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V ++ + T L F G + F+ + + + RGF FV++ D+A +A++
Sbjct: 20 TLFVSSLPYSFTKSQLEETFSDVGPIRRCFMVTQKGSTEHRGFGFVQFALKDDANRAIEI 79
Query: 77 LDGRVVDGREITVQFAKYGPNAER 100
+G V GR+I V+ A + + E+
Sbjct: 80 KNGSSVGGRKIAVKHAMHRASLEQ 103
>gi|158339703|ref|YP_001520710.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|158309944|gb|ABW31560.1| RNA-binding protein [Acaryochloris marina MBIC11017]
Length = 89
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/77 (41%), Positives = 43/77 (55%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N++F T DL +F +YG V + +P DR TG RGFAFV E KA+D
Sbjct: 2 SIYVGNLSFDATEQDLNAVFAEYGTVKQVKMPTDRETGRKRGFAFVEMGNDAEEAKAIDE 61
Query: 77 LDGRVVDGREITVQFAK 93
L+G GR + V A+
Sbjct: 62 LEGAEWMGRTLKVNKAR 78
>gi|392579140|gb|EIW72267.1| hypothetical protein TREMEDRAFT_24060, partial [Tremella
mesenterica DSM 1558]
Length = 111
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%)
Query: 7 SGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKY 66
S + D+ + + +++ T D+ +F ++G+VVDI +PRD+ TG +RGF F+ Y+
Sbjct: 21 SWHDEYKDSAYVFIGGLSYEMTEGDVIIVFSQWGEVVDINLPRDKETGKTRGFGFLMYED 80
Query: 67 ADEAQKAVDRLDGRVVDGREITVQFAK 93
AVD ++G + GR I V K
Sbjct: 81 QRSTVLAVDNMNGAQILGRTIRVDHCK 107
>gi|302678229|ref|XP_003028797.1| hypothetical protein SCHCODRAFT_44661 [Schizophyllum commune H4-8]
gi|300102486|gb|EFI93894.1| hypothetical protein SCHCODRAFT_44661 [Schizophyllum commune H4-8]
Length = 252
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 52/80 (65%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D +L V NI+ T +DL LF +G+V +++ RDR TG +GFAFV ++ AQ+A
Sbjct: 170 DLPTLRVTNISEDTQENDLRELFGVFGRVARVYVGRDRETGQGKGFAFVSFEDRAIAQRA 229
Query: 74 VDRLDGRVVDGREITVQFAK 93
+++++G+ D ++VQ+++
Sbjct: 230 MEKVNGKGYDNLILSVQWSR 249
>gi|195611722|gb|ACG27691.1| ribonucleoprotein [Zea mays]
Length = 341
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 55/109 (50%)
Query: 6 RSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYK 65
RS PP D L V N+ + T+++L +F + G+V D I D+ T SRGFAFV
Sbjct: 102 RSRPPRGDDPGRLFVGNLPYTYTSEELAQVFSEAGRVDDAQIIYDKVTNRSRGFAFVTMA 161
Query: 66 YADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDRST 114
A+EA KA+ DG ++ GR V + + ER + RD T
Sbjct: 162 TAEEAAKAIQMFDGALLGGRTARVNYPEVPRGGERRTVTMSGRRRDDGT 210
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 15 TYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAV 74
TY + N+ + AD L +F+ ++D + +R TG SRGF FV + A++AQ A+
Sbjct: 210 TYKIYAGNLGWGVRADTLRNVFEGRAGLLDARVIFERETGRSRGFGFVSFSTAEDAQAAL 269
Query: 75 DRLDGRVVDGREITVQFAKYGP 96
+ LDG ++GR + + A+ P
Sbjct: 270 ESLDGVELEGRPLRLSLAEQNP 291
>gi|254424963|ref|ZP_05038681.1| RNA-binding protein, putative [Synechococcus sp. PCC 7335]
gi|196192452|gb|EDX87416.1| RNA-binding protein, putative [Synechococcus sp. PCC 7335]
Length = 92
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 45/77 (58%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+++ +DL +F +YG V I +P DR TG RGFAFV + +KA++
Sbjct: 2 SIYVGNLSYSAKEEDLEGVFGEYGTVKRITLPTDRETGRPRGFAFVEMEEDATEEKAIEA 61
Query: 77 LDGRVVDGREITVQFAK 93
LDG GRE+ V AK
Sbjct: 62 LDGAEWMGRELRVNKAK 78
>gi|451995810|gb|EMD88278.1| hypothetical protein COCHEDRAFT_1197317 [Cochliobolus
heterostrophus C5]
Length = 282
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%)
Query: 8 GPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYA 67
G D D+ +L V N++ DL +F +YG V +F+ +DR TG ++GFAFV Y
Sbjct: 195 GKFDRDDSATLRVTNVSEFAEEQDLRDMFSRYGHVTRVFLAKDRETGRAKGFAFVSYADR 254
Query: 68 DEAQKAVDRLDGRVVDGREITVQFAK 93
+A KA +++DG + V+FAK
Sbjct: 255 SDAAKACEKMDGFGFGHLILRVEFAK 280
>gi|351703575|gb|EHB06494.1| Polyadenylate-binding protein 1-like protein [Heterocephalus
glaber]
Length = 605
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 58/104 (55%), Gaps = 3/104 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V N+ L LF ++GK++ + + RD +G SRGF FV ++ +EAQKAVD
Sbjct: 192 NIYVKNLHVDMDEQGLQDLFFEFGKMLSVKVMRDN-SGHSRGFGFVNFEKHEEAQKAVDH 250
Query: 77 LDGRVVDGREITVQFA-KYGPNAERIKEGLLNHSRDRSTG-QGV 118
++G+ V G+++ V A K G +K +DR T QGV
Sbjct: 251 MNGKEVSGQQLYVGRAQKRGERQNELKRRFEQMKQDRQTRYQGV 294
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 44/80 (55%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL V ++ T L+ F G ++ I + RD T S G+A++ ++ +A++A+D
Sbjct: 12 SLYVGDLHPDVTEAMLYETFSPVGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 77 LDGRVVDGREITVQFAKYGP 96
++ V+ G+ I + +++ P
Sbjct: 72 MNFEVIKGQPIRIMWSQRDP 91
>gi|392352553|ref|XP_003751242.1| PREDICTED: probable RNA-binding protein 19 [Rattus norvegicus]
Length = 955
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 46/79 (58%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
D+ D+ L V N+++ ++ +DL LF YG + ++ P D T +GFAFV + + + A
Sbjct: 397 DLADSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHA 456
Query: 71 QKAVDRLDGRVVDGREITV 89
KA +DG+V GR + V
Sbjct: 457 VKAYAEVDGQVFQGRMLHV 475
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGD---SRGFAFVRYKYADEAQKA 73
+L + N+ F TT + L +F + G V I + + S GF FV YK ++AQKA
Sbjct: 726 TLFIKNLNFNTTEETLKEVFSRVGAVKSCTISKKKSKAGVLLSMGFGFVEYKKPEQAQKA 785
Query: 74 VDRLDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDR 112
+ RL G +VDG ++ V+ +ER + L +R +
Sbjct: 786 LKRLQGHIVDGHKLEVRI------SERATKPALTSTRKK 818
Score = 39.3 bits (90), Expect = 1.6, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L+V N+ D LF +G + D + + + G R F F+ +K +EAQ A++
Sbjct: 4 LIVKNLPNGMKEDRFRQLFAAFGTLTDCSL-KFTKEGKFRKFGFIGFKSEEEAQAALNHF 62
Query: 78 DGRVVDGREITVQFAK 93
+D ITV+F K
Sbjct: 63 HRSFIDTSRITVEFCK 78
>gi|395833986|ref|XP_003789998.1| PREDICTED: probable RNA-binding protein 19 [Otolemur garnettii]
Length = 959
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 45/79 (56%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
D+ D+ L V N+ + +T +DL LF K+G + +I P D +GFAFV + + + A
Sbjct: 397 DLADSGRLFVRNLPYTSTEEDLEKLFSKFGPLSEIHYPIDSLIKKPKGFAFVTFMFPEHA 456
Query: 71 QKAVDRLDGRVVDGREITV 89
KA +DG+V GR + V
Sbjct: 457 VKAYTEVDGQVFQGRMLHV 475
Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 9/103 (8%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGD---SRGFAFVRYKYADEAQKA 73
+L + N+ F TT + L +F K G V I + + S GF FV Y+ ++AQKA
Sbjct: 730 TLFIKNLNFDTTEETLKNVFSKVGMVKSCSISKKKNKAGALLSMGFGFVEYRKPEQAQKA 789
Query: 74 VDRLDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDRSTGQ 116
+ + G VVD ++ V+ +ER + L +R + +
Sbjct: 790 LKQPQGLVVDNHKLEVRI------SERATKPALTSARKKQVSK 826
Score = 38.9 bits (89), Expect = 2.4, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L+V N+ + LF +G + D + + + G R F F+ +K +EAQ A++
Sbjct: 4 LIVKNLPNGMKEERFRQLFAAFGTLTDCSL-KFTKEGKFRKFGFIGFKSEEEAQTALNHF 62
Query: 78 DGRVVDGREITVQFAK 93
+ +D ITV+F K
Sbjct: 63 NKSFIDTSRITVEFCK 78
>gi|357454121|ref|XP_003597341.1| Cold-inducible RNA-binding protein [Medicago truncatula]
gi|355486389|gb|AES67592.1| Cold-inducible RNA-binding protein [Medicago truncatula]
gi|388509994|gb|AFK43063.1| unknown [Medicago truncatula]
Length = 89
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 44/76 (57%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++F TT L LF +G + + + D+ T +GF FV YK EA+KA L
Sbjct: 9 LFVSRLSFYTTQQQLESLFSPFGVLTEATLITDQNTQRPKGFGFVSYKSEIEAEKARKAL 68
Query: 78 DGRVVDGREITVQFAK 93
+GR+VDGR I V+ AK
Sbjct: 69 NGRIVDGRLIFVEHAK 84
>gi|344295376|ref|XP_003419388.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-binding protein
19-like [Loxodonta africana]
Length = 1089
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 46/79 (58%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
D+ D+ L V N+ + +T ++L LF KYG + ++ P D T +GFAF+ + + + A
Sbjct: 397 DLADSGRLFVRNLPYTSTEEELEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHA 456
Query: 71 QKAVDRLDGRVVDGREITV 89
KA +DG+V GR + V
Sbjct: 457 VKAYAEVDGQVFQGRMLHV 475
Score = 50.4 bits (119), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGD---SRGFAFVRYKYADEAQKA 73
+L + N+ F TT L +F K G V I R + S GF FV Y+ + AQKA
Sbjct: 724 TLFIKNLNFDTTEATLKEVFSKVGMVKSCSISRKKNKAGALLSMGFGFVEYRKPEHAQKA 783
Query: 74 VDRLDGRVVDGREITVQFAK 93
+ +L G VVDG ++ ++ ++
Sbjct: 784 LRQLQGHVVDGHKLELRISE 803
Score = 39.7 bits (91), Expect = 1.5, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L+V N+ + LF +G + D + + + G R F F+ +K +EAQ A++
Sbjct: 4 LIVKNLPNGMKEERFRQLFSSFGTLTDCSL-KFTKDGKFRKFGFIGFKSEEEAQTALNHF 62
Query: 78 DGRVVDGREITVQFAK 93
+ +D ITV+F K
Sbjct: 63 NKSFIDTSRITVEFCK 78
>gi|73987334|ref|XP_868600.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Canis
lupus familiaris]
Length = 185
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Query: 13 TDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+D L V ++F T L +F KYG++ ++ + +DR T SRGF FV ++ D+A+
Sbjct: 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62
Query: 73 AVDRLDGRVVDGREITV-QFAKYGPNAERIKEG 104
A+ ++G+ VDGR+I V Q K N R G
Sbjct: 63 AMMAMNGKSVDGRQIRVDQAGKSSDNRSRGYRG 95
>gi|115449133|ref|NP_001048346.1| Os02g0788300 [Oryza sativa Japonica Group]
gi|47497761|dbj|BAD19861.1| putative initiation factor 3g [Oryza sativa Japonica Group]
gi|113537877|dbj|BAF10260.1| Os02g0788300 [Oryza sativa Japonica Group]
gi|125541408|gb|EAY87803.1| hypothetical protein OsI_09222 [Oryza sativa Indica Group]
gi|125583953|gb|EAZ24884.1| hypothetical protein OsJ_08662 [Oryza sativa Japonica Group]
Length = 289
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 50/85 (58%)
Query: 13 TDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
D S+ V N++ T +DL LF +G + ++ D RTG+SRGF F+ + Y ++A++
Sbjct: 205 NDENSVRVTNLSEDTREEDLRELFGSFGPLTRAYVALDHRTGESRGFGFLSFVYREDAER 264
Query: 73 AVDRLDGRVVDGREITVQFAKYGPN 97
A+ +L+G D + V++A PN
Sbjct: 265 AIAKLNGYGYDSLILNVEWAAPRPN 289
>gi|357150983|ref|XP_003575643.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 108
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 47/76 (61%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ V ++F TT ++L +F +G + + + RD +TG +GF FV+Y A+KAV +
Sbjct: 28 IFVSKLSFYTTEEELKNIFSPFGAIEEARLMRDNQTGRPKGFGFVKYSSQVAAEKAVKAM 87
Query: 78 DGRVVDGREITVQFAK 93
DGR++ GR I V+ AK
Sbjct: 88 DGRIIRGRIIFVETAK 103
>gi|398016131|ref|XP_003861254.1| hypothetical protein, conserved [Leishmania donovani]
gi|322499479|emb|CBZ34552.1| hypothetical protein, conserved [Leishmania donovani]
Length = 693
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 7 SGPPDITDTYS-LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYK 65
SG P+ + S L V + +L LF+K+G++ + D TG SRG AFV++K
Sbjct: 220 SGQPNDAEVRSNLFVCGLPVSVRDKELLELFEKHGEIESAKVMLDIHTGRSRGIAFVKFK 279
Query: 66 YADEAQKAVDRLDGRVVDGREITVQFAK 93
+ A+ AVD L+G V+G +ITV+ A
Sbjct: 280 NVEHAENAVDALNGTTVNGHQITVRVAN 307
>gi|284929630|ref|YP_003422152.1| RRM domain-containing RNA-binding protein [cyanobacterium UCYN-A]
gi|284810074|gb|ADB95771.1| RRM domain-containing RNA-binding protein [cyanobacterium UCYN-A]
Length = 96
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 45/77 (58%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+++ T +DL +F YG+V + IP DR TG RGFAFV D+ ++A+
Sbjct: 2 SIYVGNLSYDVTKEDLNEVFTDYGEVKRVHIPTDRDTGRMRGFAFVEMNSDDQEEQAIST 61
Query: 77 LDGRVVDGREITVQFAK 93
LDG GR + V AK
Sbjct: 62 LDGAEWMGRTLKVNKAK 78
>gi|238010804|gb|ACR36437.1| unknown [Zea mays]
Length = 262
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D + V N+++ L LF + G+V++ I DR +G SRGF FV Y A+E + A
Sbjct: 175 DANRVYVGNLSWGVDNSALANLFSEQGEVLEARIIYDRESGRSRGFGFVTYGSAEEVENA 234
Query: 74 VDRLDGRVVDGREITVQFAKYGP 96
+ LDG +DGR+I V A+ P
Sbjct: 235 ISNLDGADLDGRQIRVTVAESKP 257
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%)
Query: 5 GRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRY 64
GRSG + ++ + V N+ F + L LF++ G V + + D+ TG SRGF FV
Sbjct: 70 GRSGGDEFSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTM 129
Query: 65 KYADEAQKAVDRLDGRVVDGREITVQ 90
+E + AVD+ +G V+DGR + V
Sbjct: 130 SSVEEVEVAVDQFNGYVLDGRSLRVN 155
>gi|116782736|gb|ABK22635.1| unknown [Picea sitchensis]
Length = 275
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 50/77 (64%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV NI +D+L F+++G + D+++P+D TG+ RGF FV++ +A +A
Sbjct: 37 SLLVRNIPRDCRSDELRMPFERFGPLKDVYLPKDFYTGEPRGFGFVQFMDPQDAAEAQYH 96
Query: 77 LDGRVVDGREITVQFAK 93
+DG+ + GREITV A+
Sbjct: 97 MDGQYIGGREITVVLAE 113
>gi|417408518|gb|JAA50808.1| Putative rna-binding protein seb4 rrm superfamily, partial
[Desmodus rotundus]
Length = 193
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 48/77 (62%)
Query: 13 TDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+D L V ++F T L +F KYG++ ++ + +DR T SRGF FV ++ D+A+
Sbjct: 24 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 83
Query: 73 AVDRLDGRVVDGREITV 89
A+ ++G+ VDGR+I V
Sbjct: 84 AMMAMNGKSVDGRQIRV 100
>gi|411119813|ref|ZP_11392189.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410709969|gb|EKQ67480.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 90
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V N++F+ +D+ +F +YGKV + +P DR TG RGFAFV + E A+
Sbjct: 2 TIYVGNLSFQAEEEDIREVFSEYGKVSRVSLPTDRETGRKRGFAFVDMESDAEEDAAIAE 61
Query: 77 LDGRVVDGREITVQFAK 93
LDG GRE+ V AK
Sbjct: 62 LDGAEWLGRELKVNKAK 78
>gi|237832865|ref|XP_002365730.1| RNA binding motif-containing protein [Toxoplasma gondii ME49]
gi|211963394|gb|EEA98589.1| RNA binding motif-containing protein [Toxoplasma gondii ME49]
Length = 208
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 48/77 (62%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLL+ N+ F T+ D + +F+K+G+V D+++P D T RGF FV + AQ+A+
Sbjct: 6 SLLIRNLCFETSPDRVRQIFEKFGRVRDVYLPLDHFTKRPRGFGFVEFYEESTAQEAMRE 65
Query: 77 LDGRVVDGREITVQFAK 93
+D ++DG E+ V A+
Sbjct: 66 MDRTMIDGNEVHVIIAQ 82
>gi|119488026|ref|ZP_01621470.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
gi|119455315|gb|EAW36454.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
Length = 100
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+ + T +DL +F +YG V + IP DR TG RGFAFV E A++
Sbjct: 2 SIYVGNLAYEVTEEDLKSVFAEYGAVQRVSIPTDRETGRPRGFAFVEMGAESEEDAAIEA 61
Query: 77 LDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDRST 114
LDG GR++ V AK P + G N R R +
Sbjct: 62 LDGAEWMGRDLKVNKAK--PRENKGSFGGGNRQRGRYS 97
>gi|119485430|ref|ZP_01619758.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
gi|119457186|gb|EAW38312.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
Length = 100
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N++++ T +DL +F +YG V + IP DR TG RGFAFV + Q A+++
Sbjct: 2 SVYVGNLSYQVTEEDLRSVFAEYGTVKQVSIPTDRETGRPRGFAFVEMDADTQEQAAIEK 61
Query: 77 LDGRVVDGREITVQFAK 93
LDG GR++ V A+
Sbjct: 62 LDGAEWMGRDLKVNKAR 78
>gi|308803152|ref|XP_003078889.1| putative small nuclear ribonucleoprotein (ISS) [Ostreococcus tauri]
gi|116057342|emb|CAL51769.1| putative small nuclear ribonucleoprotein (ISS) [Ostreococcus tauri]
Length = 269
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 47/78 (60%), Gaps = 5/78 (6%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+LV N+++ DD+ F YG ++D+++P+DR TG RG AFV+Y EA AV
Sbjct: 45 SVLVRNLSWDAREDDVRDRFAGYGNILDVYMPKDRETGRPRGLAFVKYATQSEADAAV-- 102
Query: 77 LDGRVVD--GREITVQFA 92
DG V D GREI + A
Sbjct: 103 -DGGVGDFLGREIRCEIA 119
>gi|30794154|ref|NP_083038.1| probable RNA-binding protein 19 [Mus musculus]
gi|73621449|sp|Q8R3C6.1|RBM19_MOUSE RecName: Full=Probable RNA-binding protein 19; AltName:
Full=RNA-binding motif protein 19
gi|19343654|gb|AAH25619.1| RNA binding motif protein 19 [Mus musculus]
gi|21707580|gb|AAH34010.1| RNA binding motif protein 19 [Mus musculus]
gi|148687830|gb|EDL19777.1| RNA binding motif protein 19 [Mus musculus]
Length = 952
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 46/79 (58%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
D+ D+ L V N+++ ++ +DL LF YG + ++ P D T +GFAFV + + + A
Sbjct: 395 DLADSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHA 454
Query: 71 QKAVDRLDGRVVDGREITV 89
KA +DG+V GR + V
Sbjct: 455 VKAYAEVDGQVFQGRMLHV 473
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGD---SRGFAFVRYKYADEAQKA 73
+L + N+ F TT + L +F K G + I + + S GF FV YK ++AQKA
Sbjct: 723 TLFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKA 782
Query: 74 VDRLDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDR 112
+ +L G VDG ++ V+ +ER + L +R +
Sbjct: 783 LKQLQGHTVDGHKLEVRI------SERATKPALTSTRKK 815
>gi|390599914|gb|EIN09310.1| translation initiation factor eIF3g [Punctularia strigosozonata
HHB-11173 SS5]
Length = 296
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 53/86 (61%)
Query: 8 GPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYA 67
G + D +L V NI+ T +DL LF ++G+V +F+ RDR TG +GFAFV ++
Sbjct: 206 GSGNRDDLPTLRVTNISEDTQENDLRDLFGRFGRVARVFVGRDRETGAGKGFAFVSFEEK 265
Query: 68 DEAQKAVDRLDGRVVDGREITVQFAK 93
A++A+ +++G D ++VQ+++
Sbjct: 266 AVAERAMQKMNGFGYDNLILSVQWSQ 291
>gi|221488187|gb|EEE26401.1| hypothetical protein TGGT1_109290 [Toxoplasma gondii GT1]
gi|221508700|gb|EEE34269.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 208
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 48/77 (62%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLL+ N+ F T+ D + +F+K+G+V D+++P D T RGF FV + AQ+A+
Sbjct: 6 SLLIRNLCFETSPDRVRQIFEKFGRVRDVYLPLDHFTKRPRGFGFVEFYEESTAQEAMRE 65
Query: 77 LDGRVVDGREITVQFAK 93
+D ++DG E+ V A+
Sbjct: 66 MDRTMIDGNEVHVIIAQ 82
>gi|403308137|ref|XP_003944528.1| PREDICTED: cold-inducible RNA-binding protein isoform 1 [Saimiri
boliviensis boliviensis]
gi|403308139|ref|XP_003944529.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Saimiri
boliviensis boliviensis]
Length = 172
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 52/86 (60%)
Query: 13 TDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+D L V ++F T L +F KYG++ ++ + +DR T SRGF FV ++ D+A+
Sbjct: 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62
Query: 73 AVDRLDGRVVDGREITVQFAKYGPNA 98
A+ ++G+ VDGR+I V A P++
Sbjct: 63 AMMAMNGKSVDGRQIRVDQAGKSPDS 88
>gi|357137357|ref|XP_003570267.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
G-like isoform 1 [Brachypodium distachyon]
Length = 287
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 50/85 (58%)
Query: 13 TDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
D S+ V N++ T DL LF +G V +++ D++TG SRGF FV + + ++A+K
Sbjct: 203 NDENSVRVTNLSEDTREPDLLELFRTFGPVSRVYVAVDQKTGSSRGFGFVNFVHREDAEK 262
Query: 73 AVDRLDGRVVDGREITVQFAKYGPN 97
A+ +L+G D + V++A PN
Sbjct: 263 AISKLNGYGYDNLILRVEWATPRPN 287
>gi|296232406|ref|XP_002761576.1| PREDICTED: cold-inducible RNA-binding protein [Callithrix
jacchus]
Length = 172
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 52/86 (60%)
Query: 13 TDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+D L V ++F T L +F KYG++ ++ + +DR T SRGF FV ++ D+A+
Sbjct: 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62
Query: 73 AVDRLDGRVVDGREITVQFAKYGPNA 98
A+ ++G+ VDGR+I V A P++
Sbjct: 63 AMMAMNGKSVDGRQIRVDQAGKSPDS 88
>gi|254585491|ref|XP_002498313.1| ZYRO0G07326p [Zygosaccharomyces rouxii]
gi|238941207|emb|CAR29380.1| ZYRO0G07326p [Zygosaccharomyces rouxii]
Length = 468
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 9 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYAD 68
P + +DT L + N++F D ++ LF +G+V+ + IP T +GF +V+Y D
Sbjct: 332 PSEPSDT--LFLGNLSFNADRDQIYELFSPHGEVISVRIPTHPETEQPKGFGYVQYASVD 389
Query: 69 EAQKAVDRLDGRVVDGREITVQFA 92
AQKA++ L G +D R + + F+
Sbjct: 390 SAQKALETLQGEYIDNRPVRLDFS 413
>gi|126660168|ref|ZP_01731286.1| RNA binding protein [Cyanothece sp. CCY0110]
gi|126618533|gb|EAZ89284.1| RNA binding protein [Cyanothece sp. CCY0110]
Length = 98
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V N+ + T++DL +F +YG V + +P DR TG RGF FV + DE A++
Sbjct: 2 TIYVGNLVYDVTSEDLTEVFSEYGTVKRVSLPTDRETGRPRGFGFVEMESDDEETAAIET 61
Query: 77 LDGRVVDGREITVQFAKYGPNAERIKEGLL 106
LDG GR++ V AK N+ R G
Sbjct: 62 LDGADWMGRQMRVNKAKPRENSGRSGSGSF 91
>gi|71897051|ref|NP_001026518.1| cold-inducible RNA-binding protein [Gallus gallus]
gi|53128363|emb|CAG31295.1| hypothetical protein RCJMB04_4m1 [Gallus gallus]
Length = 190
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Query: 13 TDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+D L V ++F T L +F KYG++ ++ + +DR T SRGF FV ++ D+A+
Sbjct: 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62
Query: 73 AVDRLDGRVVDGREITV-QFAKYGPNAERIKEG 104
A+ ++G+ VDGR+I V Q K N R G
Sbjct: 63 AMMAMNGKSVDGRQIRVDQAGKSSENRSRGYRG 95
>gi|20975278|dbj|BAB92956.1| cold inducible RNA-binding protein beta [Hyla japonica]
Length = 166
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%)
Query: 13 TDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+D L V ++F T +L +F KYG++ ++ + +DR T SRGF FV ++ ++A+
Sbjct: 4 SDEGKLFVGGLSFDTEEQNLEQVFGKYGQISEVVVVKDRETQRSRGFGFVTFENPEDAKD 63
Query: 73 AVDRLDGRVVDGREITVQFA 92
A++ ++G+ VDGR+I V A
Sbjct: 64 AMEAMNGKSVDGRQIRVDQA 83
>gi|298708065|emb|CBJ30418.1| RNA-binding protein, putative [Ectocarpus siliculosus]
Length = 192
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 48/85 (56%)
Query: 8 GPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYA 67
GP + + L V N+ DD+ F +YG V ++ + DRRTG +G+ V ++
Sbjct: 93 GPQRSVEGWILFVRNVHEEAQEDDIMDKFSEYGAVKNLHVNLDRRTGFVKGYCLVEFEKK 152
Query: 68 DEAQKAVDRLDGRVVDGREITVQFA 92
+EAQ A+D +DG + ++I+V +A
Sbjct: 153 EEAQSAIDEMDGSQLLEQDISVSWA 177
>gi|71019737|ref|XP_760099.1| hypothetical protein UM03952.1 [Ustilago maydis 521]
gi|74701184|sp|Q4P7G1.1|EIF3G_USTMA RecName: Full=Eukaryotic translation initiation factor 3 subunit G;
Short=eIF3g; AltName: Full=Eukaryotic translation
initiation factor 3 RNA-binding subunit; Short=eIF-3
RNA-binding subunit; AltName: Full=Translation
initiation factor eIF3 p33 subunit homolog; Short=eIF3
p33 homolog
gi|46099864|gb|EAK85097.1| hypothetical protein UM03952.1 [Ustilago maydis 521]
Length = 308
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 50/79 (63%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D +L V N++ DDL LF ++G+VV +++ RDR TG +G+AFV ++ ++A +A
Sbjct: 223 DLPTLRVTNLSEDADDDDLRELFMRFGRVVRVYVGRDRETGICKGYAFVSFENREDADRA 282
Query: 74 VDRLDGRVVDGREITVQFA 92
++DGR D ++ Q++
Sbjct: 283 RQKVDGRGYDNLILSCQWS 301
>gi|451851414|gb|EMD64712.1| hypothetical protein COCSADRAFT_25710 [Cochliobolus sativus ND90Pr]
Length = 282
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 48/83 (57%)
Query: 11 DITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEA 70
D D+ +L V N++ DL +F +YG V +F+ +DR TG ++GFAFV Y +A
Sbjct: 198 DRDDSATLRVTNVSEFAEEQDLRDMFSRYGHVTRVFLAKDRETGRAKGFAFVSYADRSDA 257
Query: 71 QKAVDRLDGRVVDGREITVQFAK 93
KA +++DG + V+FAK
Sbjct: 258 AKACEKMDGFGFGHLILRVEFAK 280
>gi|255581554|ref|XP_002531582.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223528778|gb|EEF30785.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 216
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL F +G + DI++PRD TG+ RGF FV+Y +A A
Sbjct: 41 SLLVRNLRHDCRTEDLRGPFGHFGPLKDIYLPRDYYTGEPRGFGFVQYVDPADAADAKHH 100
Query: 77 LDGRVVDGREITVQFA---KYGPNAERIKEGLLNHSRDR 112
+DG ++ GRE+TV FA + P R +E + S DR
Sbjct: 101 MDGEILLGRELTVVFAEENRKKPAEMRARERVRGRSYDR 139
>gi|219117467|ref|XP_002179528.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409419|gb|EEC49351.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 84
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ + N++F T + L LF+++G V+D ++P D TG +RGF FV + AQ+A++ +
Sbjct: 1 MYIGNLSFYTVPETLQELFEEFGTVIDCYMPEDPETGSARGFGFVTMD-KEAAQRAIEEI 59
Query: 78 DGRVVDGREITVQFAK 93
DG +DGR I V A+
Sbjct: 60 DGCELDGRIIRVNEAQ 75
>gi|443895166|dbj|GAC72512.1| hypothetical protein PANT_7d00134 [Pseudozyma antarctica T-34]
Length = 301
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 44/79 (55%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ V N+++ TT D L F +G++ D + +DR TG SRGF FV + EA A+ L
Sbjct: 5 VYVGNLSWNTTDDSLAHAFSAFGQLTDYIVMKDRETGRSRGFGFVTFATQGEADAAIAAL 64
Query: 78 DGRVVDGREITVQFAKYGP 96
+ + +DGR I V A P
Sbjct: 65 NEQELDGRRIRVNMANSRP 83
>gi|349804063|gb|AEQ17504.1| putative cold-inducible rna-binding protein b [Hymenochirus
curtipes]
Length = 123
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%)
Query: 13 TDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+D L + + F T D L +F KYG++ ++ + +DR T SRGF FV ++ D+A+
Sbjct: 1 SDDGKLFIGGLNFDTNEDGLEQVFGKYGQISEVVVVKDRETKRSRGFGFVTFENPDDAKD 60
Query: 73 AVDRLDGRVVDGREITVQFA 92
A+ ++G+ VDGR+I V A
Sbjct: 61 AMMAMNGKAVDGRQIRVDQA 80
>gi|449477140|ref|XP_004154942.1| PREDICTED: uncharacterized LOC101218446 [Cucumis sativus]
Length = 287
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ V I+F T L F KYG+V++ + DR TG SRGF FV Y ++EA A+ L
Sbjct: 45 VFVGGISFSTDDQSLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQAL 104
Query: 78 DGRVVDGREITVQFAK 93
DG+ + GR + V +A
Sbjct: 105 DGQDLHGRRVRVNYAN 120
>gi|218437654|ref|YP_002375983.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7424]
gi|218170382|gb|ACK69115.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7424]
Length = 110
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V NI ++ T DD+ +F +YG V + +P DR +G RGFAFV D+ A++
Sbjct: 2 SIYVGNIPYQVTQDDIKEVFGEYGTVKQVKLPVDRESGRVRGFAFVDLDTEDQENSAIEA 61
Query: 77 LDGRVVDGREITVQFAKYGPNAERIKEGLLNH 108
LDG GRE+ V A+ P ++ G N
Sbjct: 62 LDGAEWMGRELKVSKAR--PRQDKGPSGSYNK 91
>gi|320588622|gb|EFX01090.1| transformer-SR ribonucleoprotein [Grosmannia clavigera kw1407]
Length = 235
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V I R + +++ LF+KYG+V I RD T +SRGF FV+ +D+A A D
Sbjct: 80 NLFVTGIHPRLSEEEVSRLFEKYGEVEKCQIMRDPHTKESRGFGFVKMVTSDQADAAKDG 139
Query: 77 LDGRVVDGREITVQFAK 93
L G V+DGR ++++ A+
Sbjct: 140 LQGEVIDGRSLSIEKAR 156
>gi|110737295|dbj|BAF00594.1| hypothetical protein [Arabidopsis thaliana]
Length = 261
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V N+ F T D+ LF +GKV + + +DR T SRG AFV Y ++A KA
Sbjct: 58 TLYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVPREDAAKAARS 117
Query: 77 LDGRVVDGREITVQFA 92
+D ++++GR++TV A
Sbjct: 118 MDAKILNGRKLTVSIA 133
>gi|444316958|ref|XP_004179136.1| hypothetical protein TBLA_0B08010 [Tetrapisispora blattae CBS 6284]
gi|387512176|emb|CCH59617.1| hypothetical protein TBLA_0B08010 [Tetrapisispora blattae CBS 6284]
Length = 939
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 65/129 (50%), Gaps = 5/129 (3%)
Query: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
+T +L + I T DDL P+FD +GKV+ + I D TG+S G+ F+ +K EA
Sbjct: 225 LTHPGNLYIRGIPKDLTIDDLKPIFDTFGKVLSLKIICDLITGESLGYGFISFKLGSEAS 284
Query: 72 KAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDRSTGQGVAV-----LGEDTE 126
+++L+G ++G + + + E++ + D + +G+ + + +
Sbjct: 285 NCINKLNGTAMNGSTLFINYHVERKEREKVFWNNFKENNDDNKFKGIFIGNIPKYKNNKQ 344
Query: 127 MITEIEIIE 135
++T EIIE
Sbjct: 345 LVTTKEIIE 353
>gi|339898392|ref|XP_003392565.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|321399546|emb|CBZ08733.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 693
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 7 SGPPDITDTYS-LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYK 65
SG P+ + S L V + +L LF+K+G++ + D TG SRG AFV++K
Sbjct: 220 SGQPNDAEVRSNLFVCGLPVSVRDKELLELFEKHGEIESAKVMLDIHTGRSRGIAFVKFK 279
Query: 66 YADEAQKAVDRLDGRVVDGREITVQFAK 93
+ A+ AVD L+G V+G +ITV+ A
Sbjct: 280 NVEHAENAVDALNGTTVNGHQITVRVAN 307
>gi|320163510|gb|EFW40409.1| Snrp70 protein [Capsaspora owczarzaki ATCC 30864]
Length = 320
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 6 RSGPPDITDTY-SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRY 64
+ P +D + +L + N+++ TT + L ++YG + I I R+ +T RG+AFV +
Sbjct: 93 KENPNATSDPFKTLFISNLSYDTTEESLKREMEEYGSIKQIHIVRNTQTSKPRGYAFVEF 152
Query: 65 KYADEAQKAVDRLDGRVVDGREITVQFAK 93
++ + + A + DGR VDGR I V F +
Sbjct: 153 EHERDMKDAYKQADGRKVDGRRIVVDFER 181
>gi|116787606|gb|ABK24573.1| unknown [Picea sitchensis]
Length = 290
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%)
Query: 13 TDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+ T + V N+ ++ + L LF ++GKV++ + DR TG SRGF FV Y E
Sbjct: 204 SSTNKIYVGNLPWQADDNSLLQLFSEHGKVLEARVVYDRETGRSRGFGFVTYSSESEVND 263
Query: 73 AVDRLDGRVVDGREITVQFAK 93
A+ LDG +DGR + V A+
Sbjct: 264 AIAALDGTDMDGRPLRVNIAE 284
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N+ F L LF+ G+V+D+ I DR TG+SRGF FV +EA+K V+
Sbjct: 115 LFVGNLPFNLDNQQLGELFEGAGEVLDVNIITDRETGNSRGFGFVTMGTVEEAEKGVELF 174
Query: 78 DGRVVDGREITVQFA 92
+ ++GR +TV A
Sbjct: 175 NRHSLEGRLLTVNKA 189
>gi|260943806|ref|XP_002616201.1| hypothetical protein CLUG_03443 [Clavispora lusitaniae ATCC 42720]
gi|238849850|gb|EEQ39314.1| hypothetical protein CLUG_03443 [Clavispora lusitaniae ATCC 42720]
Length = 419
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 45/76 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L + N++F T + LF +F +YG VV +P T +GF +V++ +EAQ A++
Sbjct: 283 TLFIGNLSFNTERNKLFEIFGEYGTVVSCRLPTHPDTQQPKGFGYVQFSSVEEAQNALNS 342
Query: 77 LDGRVVDGREITVQFA 92
L+G +DGR + F+
Sbjct: 343 LNGEYLDGRPCRLDFS 358
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 43/80 (53%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V +++ + L F++ G V+ + +R TG SRG+ +V + A+KA++
Sbjct: 182 TLFVGRLSWNVDDEWLKREFEEAGGVISARVMIERSTGKSRGYGYVDFSSKAAAEKALNE 241
Query: 77 LDGRVVDGREITVQFAKYGP 96
L G+ +DGR + + + P
Sbjct: 242 LQGKEIDGRPVNLDMSTGKP 261
>gi|357137359|ref|XP_003570268.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
G-like isoform 2 [Brachypodium distachyon]
Length = 281
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 50/85 (58%)
Query: 13 TDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
D S+ V N++ T DL LF +G V +++ D++TG SRGF FV + + ++A+K
Sbjct: 197 NDENSVRVTNLSEDTREPDLLELFRTFGPVSRVYVAVDQKTGSSRGFGFVNFVHREDAEK 256
Query: 73 AVDRLDGRVVDGREITVQFAKYGPN 97
A+ +L+G D + V++A PN
Sbjct: 257 AISKLNGYGYDNLILRVEWATPRPN 281
>gi|453088501|gb|EMF16541.1| RRM_1-domain-containing protein, partial [Mycosphaerella populorum
SO2202]
Length = 114
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 46/88 (52%)
Query: 7 SGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKY 66
S D DT L + + F + D+ +F +YG V I + RD+ TG SRGF F++Y+
Sbjct: 24 SWHTDYRDTAYLYIGGLPFELSEGDILTIFSQYGNPVHINLVRDKDTGKSRGFCFLKYED 83
Query: 67 ADEAQKAVDRLDGRVVDGREITVQFAKY 94
AVD L G V GR I+V +Y
Sbjct: 84 QRSCDLAVDNLSGAGVMGRVISVDHTRY 111
>gi|334324956|ref|XP_001377181.2| PREDICTED: transformer-2 protein homolog beta-like [Monodelphis
domestica]
Length = 299
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + D+ I D+++ SRGFAFV
Sbjct: 118 HVGNRANPDPN--CCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFV 175
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D+A++A +R +G +DGR I V F+
Sbjct: 176 YFENVDDAKEAKERANGMELDGRRIRVDFS 205
>gi|307106096|gb|EFN54343.1| hypothetical protein CHLNCDRAFT_135593 [Chlorella variabilis]
Length = 224
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 48/85 (56%)
Query: 8 GPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYA 67
GP D SLLV N+ + DDL +KYG+V D+++P+D TG RG AFV +
Sbjct: 3 GPRDPPTGCSLLVRNLAPDVSGDDLRYAAEKYGRVKDVYVPKDYYTGRPRGIAFVEFDDR 62
Query: 68 DEAQKAVDRLDGRVVDGREITVQFA 92
+A+ A +D ++ EI VQFA
Sbjct: 63 RDAEDAKYGMDRSMLGSGEIAVQFA 87
>gi|226497258|ref|NP_001140274.1| uncharacterized protein LOC100272318 [Zea mays]
gi|194698792|gb|ACF83480.1| unknown [Zea mays]
gi|414883568|tpg|DAA59582.1| TPA: ribonucleoprotein [Zea mays]
Length = 341
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 55/109 (50%)
Query: 6 RSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYK 65
RS PP D L V N+ + T+++L +F + G+V D I D+ T SRGFAFV
Sbjct: 102 RSRPPRGDDPGRLFVGNLPYTYTSEELAQVFSEAGRVDDAQIIYDKVTNRSRGFAFVTMA 161
Query: 66 YADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIKEGLLNHSRDRST 114
A+EA KA+ DG ++ GR V + + ER + RD T
Sbjct: 162 TAEEAAKAIQMFDGALLGGRTARVNYPEVPRGGERRTVTMSGRRRDDGT 210
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 15 TYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAV 74
TY + N+ + AD L +F+ ++D + +R TG SRGF FV + A++AQ A+
Sbjct: 210 TYKIYAGNLGWGVRADTLRNVFEGRAGLLDARVIFERETGRSRGFGFVSFSTAEDAQAAL 269
Query: 75 DRLDGRVVDGREITVQFAKYGP 96
+ LDG ++GR + + A+ P
Sbjct: 270 ESLDGVELEGRSLRLSLAEQNP 291
>gi|125559266|gb|EAZ04802.1| hypothetical protein OsI_26976 [Oryza sativa Indica Group]
Length = 259
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 47/91 (51%)
Query: 6 RSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYK 65
R G + + L V N+ + L LF + G V+D + DR +G SRGF FV Y
Sbjct: 165 RGGGSNFDSSNKLYVGNLAWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSRGFGFVTYG 224
Query: 66 YADEAQKAVDRLDGRVVDGREITVQFAKYGP 96
A+E A+ LDG +DGR+I V A+ P
Sbjct: 225 SAEEVNNAISNLDGVDLDGRQIRVTVAESKP 255
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ V N+ F + L LF++ G V + + DR+TG SRGF FV A+EA AV++
Sbjct: 77 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAVEQF 136
Query: 78 DGRVVDGREITVQ 90
+G GR + V
Sbjct: 137 NGYTFQGRPLRVN 149
>gi|4544401|gb|AAD22311.1| putative glycine-rich RNA-binding protein [Arabidopsis thaliana]
Length = 185
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
+ Y V + + T + F+++G+V D I DR TG S+GF FV +K D + A
Sbjct: 42 NEYRCFVGGLAWATDEQSIERCFNEFGEVFDSKIIIDRETGRSKGFRFVTFKDEDSMRTA 101
Query: 74 VDRLDGRVVDGREITVQ 90
+DR++G+ +DGR IT Q
Sbjct: 102 IDRMNGQELDGRNITAQ 118
>gi|115473531|ref|NP_001060364.1| Os07g0631900 [Oryza sativa Japonica Group]
gi|22296371|dbj|BAC10140.1| putative 29 kDa ribonucleoprotein A, chloroplast precursor [Oryza
sativa Japonica Group]
gi|113611900|dbj|BAF22278.1| Os07g0631900 [Oryza sativa Japonica Group]
gi|125601192|gb|EAZ40768.1| hypothetical protein OsJ_25244 [Oryza sativa Japonica Group]
Length = 264
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 47/91 (51%)
Query: 6 RSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYK 65
R G + + L V N+ + L LF + G V+D + DR +G SRGF FV Y
Sbjct: 170 RGGGSNFDSSNKLYVGNLAWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSRGFGFVTYG 229
Query: 66 YADEAQKAVDRLDGRVVDGREITVQFAKYGP 96
A+E A+ LDG +DGR+I V A+ P
Sbjct: 230 SAEEVNNAISNLDGVDLDGRQIRVTVAESKP 260
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ V N+ F + L LF++ G V + + DR+TG SRGF FV A+EA AV++
Sbjct: 82 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAVEQF 141
Query: 78 DGRVVDGREITVQ 90
+G GR + V
Sbjct: 142 NGYTFQGRPLRVN 154
>gi|149706198|ref|XP_001502696.1| PREDICTED: RNA-binding protein 28 isoform 1 [Equus caballus]
Length = 768
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L++ N++F+ + DDL +F ++G V+++ IPR + G RGFAFV++K EA KA+ +
Sbjct: 116 LIIRNLSFKCSEDDLKTIFAQFGAVLEVNIPR-KPDGKMRGFAFVQFKNLLEAGKALKSM 174
Query: 78 DGRVVDGREITVQFA 92
+ + + GR + V +A
Sbjct: 175 NMKEIKGRTVAVDWA 189
>gi|116070776|ref|ZP_01468045.1| RNA-binding region RNP-1 [Synechococcus sp. BL107]
gi|116066181|gb|EAU71938.1| RNA-binding region RNP-1 [Synechococcus sp. BL107]
Length = 81
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ + N+++ +DL LF +YG+V +P DR TG RGFAFV ADE +KA+D
Sbjct: 2 TIFIGNLSWDAEREDLIHLFSQYGEVSKCSMPLDRETGRKRGFAFVDLGNADEEKKAIDD 61
Query: 77 LDGRVVDGREITVQFAK 93
L GR I+V+ A+
Sbjct: 62 LQDVEWMGRAISVRVAE 78
>gi|115529229|dbj|BAF34340.1| putative glycine-rich RNA-binding protein [Dianthus caryophyllus]
Length = 163
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 44/78 (56%)
Query: 16 YSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVD 75
Y V +++ T L F+K+G+V D I DR TG SRGF FV + + A+D
Sbjct: 6 YRCFVGGLSWGTDDRSLAEAFNKFGEVTDSKIINDRETGRSRGFGFVTFANEQSMRDAID 65
Query: 76 RLDGRVVDGREITVQFAK 93
++G+ +DGR ITV A+
Sbjct: 66 EMNGKELDGRSITVNEAQ 83
>gi|62857699|ref|NP_001017228.1| cold-inducible RNA-binding protein [Xenopus (Silurana)
tropicalis]
gi|123910273|sp|Q28IQ9.1|CIRBP_XENTR RecName: Full=Cold-inducible RNA-binding protein; AltName:
Full=Glycine-rich RNA-binding protein CIRP
gi|89268649|emb|CAJ83306.1| cold inducible RNA binding protein [Xenopus (Silurana)
tropicalis]
Length = 166
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V + F TT + L +F KYG+V ++ + +DR + SRGF FV ++ ++A+ A+ +
Sbjct: 8 LFVGGLNFETTEESLEQVFSKYGQVAEVVVVKDRESKRSRGFGFVTFENPEDAKDAMMAM 67
Query: 78 DGRVVDGREITVQFAKYGPN 97
+G+ VDGR+I V A N
Sbjct: 68 NGKSVDGRQIRVDQAGKSSN 87
>gi|357126492|ref|XP_003564921.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 156
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%)
Query: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V +++ T L F +G+V + + DR TG SRGF FV + ++A+KA +
Sbjct: 39 LFVGGLSWGTNDGSLKEAFSSFGEVYEARVITDRETGRSRGFGFVEFSNEEDAKKAASSM 98
Query: 78 DGRVVDGREITVQFAKYGP 96
DG+ +DGR + V FA P
Sbjct: 99 DGQELDGRSVRVNFANERP 117
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.142 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,305,172,482
Number of Sequences: 23463169
Number of extensions: 185315344
Number of successful extensions: 568001
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 14913
Number of HSP's successfully gapped in prelim test: 6418
Number of HSP's that attempted gapping in prelim test: 537670
Number of HSP's gapped (non-prelim): 33637
length of query: 270
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 130
effective length of database: 9,074,351,707
effective search space: 1179665721910
effective search space used: 1179665721910
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 75 (33.5 bits)