Query 024259
Match_columns 270
No_of_seqs 205 out of 1552
Neff 4.8
Searched_HMMs 46136
Date Fri Mar 29 03:16:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024259.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024259hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0484 DnaJ DnaJ-class molecu 99.8 2.1E-19 4.5E-24 172.3 6.5 61 205-269 3-63 (371)
2 KOG0713 Molecular chaperone (D 99.7 6.1E-18 1.3E-22 159.7 5.8 62 204-269 14-75 (336)
3 PRK14288 chaperone protein Dna 99.6 2.2E-16 4.7E-21 151.1 6.0 60 206-269 3-62 (369)
4 smart00271 DnaJ DnaJ molecular 99.6 1E-15 2.3E-20 108.9 7.2 60 206-268 1-60 (60)
5 PRK14296 chaperone protein Dna 99.6 4.8E-16 1E-20 149.0 6.1 59 206-269 4-62 (372)
6 PRK14279 chaperone protein Dna 99.6 1.1E-15 2.4E-20 147.4 6.7 60 206-269 9-68 (392)
7 PRK14286 chaperone protein Dna 99.6 1.6E-15 3.5E-20 145.3 6.1 60 206-269 4-63 (372)
8 cd06257 DnaJ DnaJ domain or J- 99.6 4.6E-15 1E-19 103.7 6.7 55 207-265 1-55 (55)
9 KOG0712 Molecular chaperone (D 99.6 1.4E-15 3.1E-20 144.4 5.4 58 205-269 3-60 (337)
10 PRK14282 chaperone protein Dna 99.6 4.1E-15 8.8E-20 142.2 6.6 62 205-269 3-64 (369)
11 PRK14285 chaperone protein Dna 99.6 4.8E-15 1E-19 141.7 6.5 60 206-269 3-62 (365)
12 PRK14287 chaperone protein Dna 99.5 5E-15 1.1E-19 141.9 6.4 59 206-269 4-62 (371)
13 PRK14295 chaperone protein Dna 99.5 6.5E-15 1.4E-19 141.9 6.4 60 206-269 9-68 (389)
14 PRK14277 chaperone protein Dna 99.5 6.9E-15 1.5E-19 141.5 6.3 60 206-269 5-64 (386)
15 PF00226 DnaJ: DnaJ domain; I 99.5 8.5E-15 1.9E-19 106.0 5.3 59 207-268 1-59 (64)
16 PRK14283 chaperone protein Dna 99.5 7.3E-15 1.6E-19 140.9 6.0 60 205-269 4-63 (378)
17 PRK14297 chaperone protein Dna 99.5 1E-14 2.2E-19 140.0 6.9 60 206-269 4-63 (380)
18 PRK14278 chaperone protein Dna 99.5 8.3E-15 1.8E-19 140.7 6.3 59 206-269 3-61 (378)
19 PRK14276 chaperone protein Dna 99.5 7E-15 1.5E-19 141.2 5.8 59 206-269 4-62 (380)
20 KOG0717 Molecular chaperone (D 99.5 8.6E-15 1.9E-19 143.1 5.6 63 204-269 6-68 (508)
21 PRK14301 chaperone protein Dna 99.5 1.3E-14 2.8E-19 139.1 6.7 60 206-269 4-63 (373)
22 PRK14299 chaperone protein Dna 99.5 1.2E-14 2.7E-19 134.9 6.2 59 206-269 4-62 (291)
23 PRK14298 chaperone protein Dna 99.5 1.1E-14 2.5E-19 139.8 6.1 59 206-269 5-63 (377)
24 PTZ00037 DnaJ_C chaperone prot 99.5 9.3E-15 2E-19 142.5 5.5 57 205-269 27-83 (421)
25 PRK14294 chaperone protein Dna 99.5 1.5E-14 3.2E-19 138.2 6.5 61 205-269 3-63 (366)
26 KOG0716 Molecular chaperone (D 99.5 1.2E-14 2.6E-19 134.2 5.5 62 205-270 30-91 (279)
27 PRK10767 chaperone protein Dna 99.5 1.8E-14 3.8E-19 137.7 6.7 61 205-269 3-63 (371)
28 PRK14280 chaperone protein Dna 99.5 1.3E-14 2.9E-19 139.1 5.8 59 206-269 4-62 (376)
29 PRK14284 chaperone protein Dna 99.5 1.5E-14 3.3E-19 139.3 5.9 59 207-269 2-60 (391)
30 PRK14291 chaperone protein Dna 99.5 1.4E-14 3E-19 139.2 5.4 59 206-269 3-61 (382)
31 PRK14281 chaperone protein Dna 99.5 1.9E-14 4.1E-19 139.0 6.2 60 206-269 3-62 (397)
32 KOG0691 Molecular chaperone (D 99.5 2.6E-14 5.7E-19 134.0 5.3 61 205-269 4-64 (296)
33 PRK14290 chaperone protein Dna 99.5 3.8E-14 8.2E-19 135.4 6.4 61 206-269 3-63 (365)
34 KOG0718 Molecular chaperone (D 99.5 4.1E-14 8.9E-19 138.7 5.2 66 202-269 5-71 (546)
35 PRK10266 curved DNA-binding pr 99.5 4.7E-14 1E-18 131.8 5.4 60 205-269 3-62 (306)
36 PRK14289 chaperone protein Dna 99.5 7.6E-14 1.6E-18 134.1 6.4 59 206-268 5-63 (386)
37 PRK14292 chaperone protein Dna 99.5 8.3E-14 1.8E-18 133.1 6.6 59 206-269 2-60 (371)
38 PRK14300 chaperone protein Dna 99.4 7.5E-14 1.6E-18 133.7 5.3 59 206-269 3-61 (372)
39 KOG0715 Molecular chaperone (D 99.4 8.8E-14 1.9E-18 129.8 5.2 59 206-269 43-101 (288)
40 COG2214 CbpA DnaJ-class molecu 99.4 1.5E-13 3.3E-18 115.5 5.5 64 203-269 3-66 (237)
41 PRK14293 chaperone protein Dna 99.4 1.5E-13 3.3E-18 131.7 5.4 59 206-269 3-61 (374)
42 KOG0719 Molecular chaperone (D 99.4 1.4E-13 3E-18 125.3 4.0 64 204-269 12-75 (264)
43 PTZ00341 Ring-infected erythro 99.4 5.4E-13 1.2E-17 139.9 5.9 60 205-269 572-631 (1136)
44 KOG0721 Molecular chaperone (D 99.3 1.5E-12 3.3E-17 117.3 5.9 63 203-269 96-158 (230)
45 PRK05014 hscB co-chaperone Hsc 99.3 2.9E-12 6.4E-17 111.4 6.9 63 207-269 2-67 (171)
46 PRK00294 hscB co-chaperone Hsc 99.3 1E-11 2.2E-16 108.5 7.3 66 204-269 2-70 (173)
47 PRK01356 hscB co-chaperone Hsc 99.3 5.9E-12 1.3E-16 109.1 5.3 64 206-269 2-66 (166)
48 PRK03578 hscB co-chaperone Hsc 99.2 1.4E-11 3.1E-16 107.7 7.4 65 205-269 5-72 (176)
49 PRK09430 djlA Dna-J like membr 99.2 7.6E-12 1.6E-16 115.5 5.9 63 202-266 196-263 (267)
50 PHA03102 Small T antigen; Revi 99.2 9.1E-12 2E-16 107.1 4.5 58 205-268 4-61 (153)
51 KOG0624 dsRNA-activated protei 99.2 1.3E-11 2.7E-16 118.7 3.9 67 201-269 389-456 (504)
52 TIGR03835 termin_org_DnaJ term 99.2 2.2E-11 4.9E-16 125.5 5.9 59 206-269 2-60 (871)
53 PTZ00100 DnaJ chaperone protei 99.2 3.8E-11 8.3E-16 99.1 5.4 54 203-264 62-115 (116)
54 KOG0714 Molecular chaperone (D 99.1 6.3E-11 1.4E-15 104.6 3.8 62 205-269 2-63 (306)
55 KOG0720 Molecular chaperone (D 99.0 1.7E-10 3.8E-15 113.1 4.8 63 202-269 231-293 (490)
56 KOG0550 Molecular chaperone (D 99.0 2E-10 4.3E-15 112.1 3.9 63 203-268 370-432 (486)
57 KOG0722 Molecular chaperone (D 99.0 1.8E-10 3.8E-15 106.7 2.9 61 203-268 30-90 (329)
58 PRK01773 hscB co-chaperone Hsc 98.9 3.5E-09 7.6E-14 92.6 6.3 63 206-268 2-67 (173)
59 PHA02624 large T antigen; Prov 98.8 2.6E-09 5.6E-14 108.8 4.6 58 205-268 10-67 (647)
60 COG5407 SEC63 Preprotein trans 98.8 2.3E-09 4.9E-14 105.6 3.8 62 205-268 97-161 (610)
61 TIGR00714 hscB Fe-S protein as 98.7 3.8E-08 8.3E-13 84.6 6.0 50 220-269 3-55 (157)
62 KOG1150 Predicted molecular ch 98.5 7.8E-08 1.7E-12 86.6 4.8 61 204-267 51-111 (250)
63 TIGR02349 DnaJ_bact chaperone 98.5 1.4E-07 3.1E-12 89.7 6.5 35 207-243 1-35 (354)
64 KOG1789 Endocytosis protein RM 98.3 4.8E-07 1E-11 96.4 5.1 67 194-265 1269-1337(2235)
65 COG5269 ZUO1 Ribosome-associat 98.2 9.3E-07 2E-11 83.0 2.8 68 199-268 36-106 (379)
66 KOG0568 Molecular chaperone (D 97.8 2E-05 4.3E-10 72.9 4.8 55 205-264 46-101 (342)
67 KOG0723 Molecular chaperone (D 97.2 0.00072 1.6E-08 55.6 5.0 53 206-266 56-108 (112)
68 COG1076 DjlA DnaJ-domain-conta 96.8 0.00088 1.9E-08 58.2 2.9 56 206-263 113-173 (174)
69 KOG0431 Auxilin-like protein a 96.5 0.0033 7.1E-08 62.7 5.0 45 220-264 400-449 (453)
70 KOG3192 Mitochondrial J-type c 96.1 0.0045 9.7E-08 54.1 2.8 67 203-269 5-74 (168)
71 COG1076 DjlA DnaJ-domain-conta 94.7 0.015 3.3E-07 50.5 1.6 62 207-268 2-66 (174)
72 PF03656 Pam16: Pam16; InterP 85.3 2 4.3E-05 36.3 5.3 39 202-242 54-92 (127)
73 PF13446 RPT: A repeated domai 83.0 2.7 5.8E-05 30.3 4.5 30 203-234 2-31 (62)
74 PF14687 DUF4460: Domain of un 72.2 9.3 0.0002 31.5 5.2 47 221-267 7-55 (112)
75 COG2879 Uncharacterized small 35.9 49 0.0011 25.1 3.2 28 228-259 27-54 (65)
76 PF07709 SRR: Seven Residue Re 25.1 44 0.00094 17.7 1.0 13 252-264 2-14 (14)
77 PF12434 Malate_DH: Malate deh 21.9 94 0.002 19.9 2.2 17 221-237 9-25 (28)
78 PHA03308 transcriptional regul 20.2 44 0.00095 36.4 0.8 16 17-32 877-892 (1463)
No 1
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=99.78 E-value=2.1e-19 Score=172.33 Aligned_cols=61 Identities=39% Similarity=0.536 Sum_probs=57.9
Q ss_pred ccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCCC
Q 024259 205 MASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 205 ~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
..+||+||||+++| +.+|||+|||+||++||||+++++ ++|+++|++|++||+||+||+|.
T Consensus 3 ~~dyYeiLGV~k~A--s~~EIKkAYRkLA~kyHPD~n~g~--~~AeeKFKEI~eAYEVLsD~eKR 63 (371)
T COG0484 3 KRDYYEILGVSKDA--SEEEIKKAYRKLAKKYHPDRNPGD--KEAEEKFKEINEAYEVLSDPEKR 63 (371)
T ss_pred ccchhhhcCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCC--HHHHHHHHHHHHHHHHhCCHHHH
Confidence 47899999999999 999999999999999999999964 78999999999999999999875
No 2
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.71 E-value=6.1e-18 Score=159.72 Aligned_cols=62 Identities=35% Similarity=0.457 Sum_probs=58.7
Q ss_pred CccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCCC
Q 024259 204 DMASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 204 ~~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
..+|||+||||+++| +..+||+|||+||++|||||++++ +.|.++|+.|+.||+||+||+++
T Consensus 14 ~~rDfYelLgV~k~A--sd~eIKkAYRKLALk~HPDkNpdd--p~A~e~F~~in~AYEVLsDpekR 75 (336)
T KOG0713|consen 14 AGRDFYELLGVPKNA--SDQEIKKAYRKLALKYHPDKNPDD--PNANEKFKEINAAYEVLSDPEKR 75 (336)
T ss_pred cCCCHHHHhCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCC--HHHHHHHHHHHHHHHHhcCHHHH
Confidence 347999999999999 999999999999999999999987 78999999999999999999864
No 3
>PRK14288 chaperone protein DnaJ; Provisional
Probab=99.63 E-value=2.2e-16 Score=151.14 Aligned_cols=60 Identities=42% Similarity=0.555 Sum_probs=55.8
Q ss_pred cccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCCC
Q 024259 206 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 206 ~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
.+||+||||+++| +.+|||+|||+||++||||+++++ ++|+++|++|++||+||+||+|.
T Consensus 3 ~dyY~vLgv~~~A--s~~eIkkayrkla~k~HPD~~~~~--~~a~~~f~~i~~AYevLsd~~kR 62 (369)
T PRK14288 3 LSYYEILEVEKHS--NQETIKKSYRKLALKYHPDRNAGD--KEAEEKFKLINEAYGVLSDEKKR 62 (369)
T ss_pred CChHHHcCCCCCC--CHHHHHHHHHHHHHHHCCCCCCCc--cHHHHHHHHHHHHHHHhccHHHH
Confidence 5899999999999 999999999999999999999754 56899999999999999999864
No 4
>smart00271 DnaJ DnaJ molecular chaperone homology domain.
Probab=99.62 E-value=1e-15 Score=108.89 Aligned_cols=60 Identities=42% Similarity=0.626 Sum_probs=55.2
Q ss_pred cccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCC
Q 024259 206 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLA 268 (270)
Q Consensus 206 ~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k 268 (270)
.++|+||||++++ +.++|+++|+++++++|||++++. .+.+++.|+.|++||++|+||.+
T Consensus 1 ~~~y~vLgl~~~~--~~~~ik~ay~~l~~~~HPD~~~~~-~~~~~~~~~~l~~Ay~~L~~~~~ 60 (60)
T smart00271 1 TDYYEILGVPRDA--SLDEIKKAYRKLALKYHPDKNPGD-KEEAEEKFKEINEAYEVLSDPEK 60 (60)
T ss_pred CCHHHHcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCCc-hHHHHHHHHHHHHHHHHHcCCCC
Confidence 3799999999999 999999999999999999999864 37899999999999999999864
No 5
>PRK14296 chaperone protein DnaJ; Provisional
Probab=99.61 E-value=4.8e-16 Score=148.97 Aligned_cols=59 Identities=25% Similarity=0.347 Sum_probs=55.4
Q ss_pred cccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCCC
Q 024259 206 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 206 ~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
.+||+||||+++| +.+|||+|||+||++||||++++ +.|+++|++|++||+||+||+|.
T Consensus 4 ~dyY~~Lgv~~~a--~~~eik~ayrkla~~~HPD~n~~---~~a~~~F~~i~~AyevLsD~~KR 62 (372)
T PRK14296 4 KDYYEVLGVSKTA--SEQEIRQAYRKLAKQYHPDLNKS---PDAHDKMVEINEAADVLLDKDKR 62 (372)
T ss_pred CCHHHhcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCC---chHHHHHHHHHHHHHHhcCHHHh
Confidence 6999999999999 99999999999999999999875 56999999999999999999874
No 6
>PRK14279 chaperone protein DnaJ; Provisional
Probab=99.59 E-value=1.1e-15 Score=147.38 Aligned_cols=60 Identities=35% Similarity=0.479 Sum_probs=56.4
Q ss_pred cccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCCC
Q 024259 206 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 206 ~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
.|||+||||+++| +.+|||+|||+||++||||+++++ +.|+++|++|++||+||+||+|.
T Consensus 9 ~Dyy~~Lgv~~~a--~~~eik~ayr~la~~~HPD~~~~~--~~a~~~f~~i~~Ay~vLsD~~KR 68 (392)
T PRK14279 9 KDFYKELGVSSDA--SAEEIKKAYRKLARELHPDANPGD--PAAEERFKAVSEAHDVLSDPAKR 68 (392)
T ss_pred cCHHHhcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCCC--hHHHHHHHHHHHHHHHhcchhhh
Confidence 6999999999999 999999999999999999998764 57999999999999999999875
No 7
>PRK14286 chaperone protein DnaJ; Provisional
Probab=99.58 E-value=1.6e-15 Score=145.31 Aligned_cols=60 Identities=40% Similarity=0.583 Sum_probs=55.9
Q ss_pred cccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCCC
Q 024259 206 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 206 ~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
.+||+||||+++| +.+|||+|||+||++||||+++++ ++|+++|++|++||+||+||++.
T Consensus 4 ~d~y~~Lgv~~~a--~~~eik~ayr~la~~~HPD~~~~~--~~a~~~f~~i~~Ay~vL~d~~kR 63 (372)
T PRK14286 4 RSYYDILGVSKSA--NDEEIKSAYRKLAIKYHPDKNKGN--KESEEKFKEATEAYEILRDPKKR 63 (372)
T ss_pred CCHHHhcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCCc--hHHHHHHHHHHHHHHHhccHHHH
Confidence 5999999999999 999999999999999999998754 57999999999999999999864
No 8
>cd06257 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
Probab=99.58 E-value=4.6e-15 Score=103.66 Aligned_cols=55 Identities=42% Similarity=0.604 Sum_probs=51.7
Q ss_pred ccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccC
Q 024259 207 SDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCD 265 (270)
Q Consensus 207 d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsD 265 (270)
+||+||||++++ +.++||++|++|++++|||++++. +.+.+.|+.|++||++|+|
T Consensus 1 ~~y~vLgl~~~~--~~~~ik~~y~~l~~~~HPD~~~~~--~~~~~~~~~l~~Ay~~L~d 55 (55)
T cd06257 1 DYYDILGVPPDA--SDEEIKKAYRKLALKYHPDKNPDD--PEAEEKFKEINEAYEVLSD 55 (55)
T ss_pred ChHHHcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCCc--HHHHHHHHHHHHHHHHhcC
Confidence 589999999999 999999999999999999999864 6799999999999999987
No 9
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.58 E-value=1.4e-15 Score=144.40 Aligned_cols=58 Identities=40% Similarity=0.534 Sum_probs=55.1
Q ss_pred ccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCCC
Q 024259 205 MASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 205 ~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
...+|+||||+++| +.+|||+|||+||++|||||+++ +.++|++|++||+||+||+|.
T Consensus 3 ~~~~y~il~v~~~A--s~~eikkayrkla~k~HpDkn~~-----~~ekfkei~~AyevLsd~ekr 60 (337)
T KOG0712|consen 3 NTKLYDILGVSPDA--SEEEIKKAYRKLALKYHPDKNPD-----AGEKFKEISQAYEVLSDPEKR 60 (337)
T ss_pred ccccceeeccCCCc--CHHHHHHHHHHHHHHhCCCCCcc-----HHHHHHHHHHHHHHhcCHHHH
Confidence 46799999999999 99999999999999999999987 899999999999999999875
No 10
>PRK14282 chaperone protein DnaJ; Provisional
Probab=99.56 E-value=4.1e-15 Score=142.20 Aligned_cols=62 Identities=34% Similarity=0.534 Sum_probs=56.4
Q ss_pred ccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCCC
Q 024259 205 MASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 205 ~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
..+||+||||+++| +.+|||+|||+||++||||+++++. ..|+++|++|++||+||+||.+.
T Consensus 3 ~~d~y~~lgv~~~a--~~~eik~ayr~la~~~HPD~~~~~~-~~a~~~f~~i~~Ay~vL~d~~kR 64 (369)
T PRK14282 3 KKDYYEILGVSRNA--TQEEIKRAYKRLVKEWHPDRHPENR-KEAEQKFKEIQEAYEVLSDPQKR 64 (369)
T ss_pred CCChHHhcCCCCCC--CHHHHHHHHHHHHHHHCCCCCccch-hHHHHHHHHHHHHHHHhcChhhH
Confidence 36899999999999 9999999999999999999987542 46899999999999999999874
No 11
>PRK14285 chaperone protein DnaJ; Provisional
Probab=99.55 E-value=4.8e-15 Score=141.70 Aligned_cols=60 Identities=35% Similarity=0.555 Sum_probs=56.0
Q ss_pred cccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCCC
Q 024259 206 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 206 ~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
.+||+||||+++| +.++||+|||+||++||||+++++ +.|+++|++|++||+||+||++.
T Consensus 3 ~d~y~iLgv~~~a--~~~eIk~ayr~la~~~HPD~~~~~--~~a~~~f~~i~~Ay~vL~d~~kr 62 (365)
T PRK14285 3 RDYYEILGLSKGA--SKDEIKKAYRKIAIKYHPDKNKGN--KEAESIFKEATEAYEVLIDDNKR 62 (365)
T ss_pred CCHHHhcCCCCCC--CHHHHHHHHHHHHHHHCCCCCCCC--HHHHHHHHHHHHHHHHHcCcchh
Confidence 5899999999999 999999999999999999998764 57899999999999999999874
No 12
>PRK14287 chaperone protein DnaJ; Provisional
Probab=99.55 E-value=5e-15 Score=141.88 Aligned_cols=59 Identities=36% Similarity=0.517 Sum_probs=55.2
Q ss_pred cccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCCC
Q 024259 206 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 206 ~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
.+||+||||+++| +.+|||+|||+||++||||+++. +.|+++|++|++||++|+||++.
T Consensus 4 ~d~y~~Lgv~~~a--~~~eik~ayr~la~~~HpD~~~~---~~~~~~f~~i~~Ay~~L~d~~kR 62 (371)
T PRK14287 4 RDYYEVLGVDRNA--SVDEVKKAYRKLARKYHPDVNKA---PDAEDKFKEVKEAYDTLSDPQKK 62 (371)
T ss_pred CCHHHhcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCC---hhHHHHHHHHHHHHHHhCcHhHH
Confidence 5899999999999 99999999999999999999874 56899999999999999999864
No 13
>PRK14295 chaperone protein DnaJ; Provisional
Probab=99.54 E-value=6.5e-15 Score=141.95 Aligned_cols=60 Identities=37% Similarity=0.517 Sum_probs=55.8
Q ss_pred cccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCCC
Q 024259 206 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 206 ~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
.+||+||||+++| +.++||+|||+||++||||+++++ +.|+++|++|++||+||+||++.
T Consensus 9 ~d~y~~Lgv~~~a--~~~eik~ayr~la~~~HPD~~~~~--~~a~~~f~~i~~Ay~vL~d~~~r 68 (389)
T PRK14295 9 KDYYKVLGVPKDA--TEAEIKKAYRKLAREYHPDANKGD--AKAEERFKEISEAYDVLSDEKKR 68 (389)
T ss_pred cCHHHhcCCCCCC--CHHHHHHHHHHHHHHHCCCcCCCc--hhHHHHHHHHHHHHHHHCchhhH
Confidence 5999999999999 999999999999999999998764 56999999999999999999864
No 14
>PRK14277 chaperone protein DnaJ; Provisional
Probab=99.54 E-value=6.9e-15 Score=141.47 Aligned_cols=60 Identities=37% Similarity=0.488 Sum_probs=55.9
Q ss_pred cccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCCC
Q 024259 206 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 206 ~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
.+||+||||+++| +.++||+|||+||++||||+++++ +.|+++|++|++||+||+||++.
T Consensus 5 ~d~y~~Lgv~~~a--~~~eik~ayr~la~~~HPD~~~~~--~~a~~~f~~i~~Ay~vL~d~~kr 64 (386)
T PRK14277 5 KDYYEILGVDRNA--TEEEIKKAYRRLAKKYHPDLNPGD--KEAEQKFKEINEAYEILSDPQKR 64 (386)
T ss_pred CCHHHhcCCCCCC--CHHHHHHHHHHHHHHHCCCcCCCc--hHHHHHHHHHHHHHHHhCCHHHH
Confidence 5999999999999 999999999999999999999854 57899999999999999999864
No 15
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....
Probab=99.54 E-value=8.5e-15 Score=105.98 Aligned_cols=59 Identities=37% Similarity=0.549 Sum_probs=54.6
Q ss_pred ccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCC
Q 024259 207 SDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLA 268 (270)
Q Consensus 207 d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k 268 (270)
++|+||||++++ +.++|+++|+++++++|||++++.. ..+++.|+.|++||++|+||.+
T Consensus 1 ~~y~iLgl~~~~--~~~eik~~y~~l~~~~HPD~~~~~~-~~~~~~~~~i~~Ay~~L~~~~~ 59 (64)
T PF00226_consen 1 NPYEILGLPPDA--SDEEIKKAYRRLSKQYHPDKNSGDE-AEAEEKFARINEAYEILSDPER 59 (64)
T ss_dssp HHHHHCTSTTTS--SHHHHHHHHHHHHHHTSTTTGTSTH-HHHHHHHHHHHHHHHHHHSHHH
T ss_pred ChHHHCCCCCCC--CHHHHHHHHHhhhhccccccchhhh-hhhhHHHHHHHHHHHHhCCHHH
Confidence 589999999999 9999999999999999999988754 5799999999999999999864
No 16
>PRK14283 chaperone protein DnaJ; Provisional
Probab=99.53 E-value=7.3e-15 Score=140.86 Aligned_cols=60 Identities=37% Similarity=0.442 Sum_probs=55.8
Q ss_pred ccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCCC
Q 024259 205 MASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 205 ~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
..+||+||||+++| +.+|||+|||+||++||||++++ +.|+++|++|++||+||+||.+.
T Consensus 4 ~~d~y~~Lgv~~~a--~~~eik~ayr~la~~~HPD~~~~---~~a~~~f~~i~~Ay~~Lsd~~kR 63 (378)
T PRK14283 4 KRDYYEVLGVDRNA--DKKEIKKAYRKLARKYHPDVSEE---EGAEEKFKEISEAYAVLSDDEKR 63 (378)
T ss_pred cCChHHhhCCCCCC--CHHHHHHHHHHHHHHHCcCCCCC---ccHHHHHHHHHHHHHHhchhHHH
Confidence 46999999999999 99999999999999999999875 56999999999999999999863
No 17
>PRK14297 chaperone protein DnaJ; Provisional
Probab=99.53 E-value=1e-14 Score=139.97 Aligned_cols=60 Identities=38% Similarity=0.566 Sum_probs=56.0
Q ss_pred cccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCCC
Q 024259 206 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 206 ~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
.+||+||||+++| +.++||+|||+||++||||+++++ +.|+++|++|++||+||+||++.
T Consensus 4 ~d~y~~Lgv~~~a--~~~~ik~ayr~la~~~HPD~~~~~--~~a~~~f~~i~~Ay~vL~d~~~r 63 (380)
T PRK14297 4 KDYYEVLGLEKGA--SDDEIKKAFRKLAIKYHPDKNKGN--KEAEEKFKEINEAYQVLSDPQKK 63 (380)
T ss_pred CChHHhhCCCCCC--CHHHHHHHHHHHHHHHCcCCCCCc--HHHHHHHHHHHHHHHHhcCHhhh
Confidence 5999999999999 999999999999999999998764 57999999999999999999864
No 18
>PRK14278 chaperone protein DnaJ; Provisional
Probab=99.53 E-value=8.3e-15 Score=140.67 Aligned_cols=59 Identities=34% Similarity=0.399 Sum_probs=55.3
Q ss_pred cccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCCC
Q 024259 206 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 206 ~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
.+||+||||+++| +.++||+|||+||++||||++++ ++|+++|++|++||+||+||++.
T Consensus 3 ~d~y~iLgv~~~a--~~~eik~ayr~la~~~hpD~~~~---~~a~~~f~~i~~Ay~vL~d~~~r 61 (378)
T PRK14278 3 RDYYGLLGVSRNA--SDAEIKRAYRKLARELHPDVNPD---EEAQEKFKEISVAYEVLSDPEKR 61 (378)
T ss_pred CCcceecCCCCCC--CHHHHHHHHHHHHHHHCCCCCCc---HHHHHHHHHHHHHHHHhchhhhh
Confidence 5899999999999 99999999999999999999874 67999999999999999999864
No 19
>PRK14276 chaperone protein DnaJ; Provisional
Probab=99.53 E-value=7e-15 Score=141.15 Aligned_cols=59 Identities=32% Similarity=0.492 Sum_probs=55.3
Q ss_pred cccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCCC
Q 024259 206 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 206 ~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
.+||+||||+++| +.+|||+|||+||++||||+++. +.|+++|++|++||+||+||++.
T Consensus 4 ~d~y~~Lgv~~~a--~~~eik~ayr~la~~~HpD~~~~---~~a~~~f~~i~~Ay~vL~d~~kR 62 (380)
T PRK14276 4 TEYYDRLGVSKDA--SQDEIKKAYRKLSKKYHPDINKE---PGAEEKYKEVQEAYETLSDPQKR 62 (380)
T ss_pred CCHHHhhCCCCCC--CHHHHHHHHHHHHHHHCcCCCCC---cCHHHHHHHHHHHHHHhcCHhhh
Confidence 5999999999999 99999999999999999999875 46899999999999999999874
No 20
>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.52 E-value=8.6e-15 Score=143.07 Aligned_cols=63 Identities=29% Similarity=0.455 Sum_probs=57.8
Q ss_pred CccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCCC
Q 024259 204 DMASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 204 ~~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
..+.||+||||..++ +..+||++||+|||+||||+++... ++|+++|++|+.||+||+||..+
T Consensus 6 ~~~c~YE~L~v~~~a--~d~eik~~YRklALq~HPDknpd~i-eeat~~F~~i~aAYeVLSdp~eR 68 (508)
T KOG0717|consen 6 KKRCYYEVLGVERDA--DDDEIKKNYRKLALQYHPDKNPDRI-EEATQQFQLIQAAYEVLSDPQER 68 (508)
T ss_pred hhhHHHHHhcccccC--CHHHHHHHHHHHHHhhCCCCCCccH-HHHHHHHHHHHHHHHHhcChHhh
Confidence 457899999999999 9999999999999999999987654 88999999999999999999753
No 21
>PRK14301 chaperone protein DnaJ; Provisional
Probab=99.52 E-value=1.3e-14 Score=139.10 Aligned_cols=60 Identities=35% Similarity=0.532 Sum_probs=56.0
Q ss_pred cccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCCC
Q 024259 206 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 206 ~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
.+||+||||++++ +.++||+|||+||++||||+++++ ++|+++|++|++||+||+||.+.
T Consensus 4 ~~~y~~Lgv~~~a--~~~~ik~ayr~la~~~HPD~~~~~--~~a~~~f~~i~~Ay~vL~d~~kr 63 (373)
T PRK14301 4 RDYYEVLGVSRDA--SEDEIKKAYRKLALQYHPDRNPDN--PEAEQKFKEAAEAYEVLRDAEKR 63 (373)
T ss_pred CChHHhcCCCCCC--CHHHHHHHHHHHHHHhCCCcCCCC--hHHHHHHHHHHHHHHHhcchhhh
Confidence 6999999999999 999999999999999999998764 57899999999999999999864
No 22
>PRK14299 chaperone protein DnaJ; Provisional
Probab=99.52 E-value=1.2e-14 Score=134.91 Aligned_cols=59 Identities=32% Similarity=0.432 Sum_probs=55.0
Q ss_pred cccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCCC
Q 024259 206 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 206 ~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
.+||+||||+++| +.++||+|||+||++||||++++ +.++++|++|++||++|+||++.
T Consensus 4 ~d~y~vLgv~~~a--~~~eik~ayr~la~~~HPD~~~~---~~~~~~f~~i~~Ay~~L~d~~kr 62 (291)
T PRK14299 4 KDYYAILGVPKNA--SQDEIKKAFKKLARKYHPDVNKS---PGAEEKFKEINEAYTVLSDPEKR 62 (291)
T ss_pred CCHHHHcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCC---hhHHHHHHHHHHHHHHhcCHHHH
Confidence 6899999999999 99999999999999999999874 56899999999999999999753
No 23
>PRK14298 chaperone protein DnaJ; Provisional
Probab=99.52 E-value=1.1e-14 Score=139.77 Aligned_cols=59 Identities=42% Similarity=0.589 Sum_probs=55.2
Q ss_pred cccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCCC
Q 024259 206 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 206 ~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
.+||+||||++++ +.+|||+|||+||++||||+++. +.++++|++|++||+||+||++.
T Consensus 5 ~d~y~iLgv~~~a--~~~eik~ayr~la~~~HPD~~~~---~~~~~~f~~i~~Ay~vL~d~~kR 63 (377)
T PRK14298 5 RDYYEILGLSKDA--SVEDIKKAYRKLAMKYHPDKNKE---PDAEEKFKEISEAYAVLSDAEKR 63 (377)
T ss_pred CCHHHhhCCCCCC--CHHHHHHHHHHHHHHhCccccCC---hhHHHHHHHHHHHHHHhcchHhh
Confidence 5999999999999 99999999999999999999875 56899999999999999999864
No 24
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=99.52 E-value=9.3e-15 Score=142.53 Aligned_cols=57 Identities=35% Similarity=0.425 Sum_probs=52.5
Q ss_pred ccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCCC
Q 024259 205 MASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 205 ~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
..+||+||||+++| +.+|||+|||+||++||||++++ .++|++|++||+||+||+|.
T Consensus 27 ~~d~Y~vLGV~~~A--s~~eIKkAYrkla~k~HPDk~~~------~e~F~~i~~AYevLsD~~kR 83 (421)
T PTZ00037 27 NEKLYEVLNLSKDC--TTSEIKKAYRKLAIKHHPDKGGD------PEKFKEISRAYEVLSDPEKR 83 (421)
T ss_pred chhHHHHcCCCCCC--CHHHHHHHHHHHHHHHCCCCCch------HHHHHHHHHHHHHhccHHHH
Confidence 46999999999999 99999999999999999999752 47999999999999999864
No 25
>PRK14294 chaperone protein DnaJ; Provisional
Probab=99.51 E-value=1.5e-14 Score=138.18 Aligned_cols=61 Identities=36% Similarity=0.536 Sum_probs=56.0
Q ss_pred ccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCCC
Q 024259 205 MASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 205 ~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
..+||+||||+++| +.+|||+|||+||++||||+++++ ++++++|++|++||+||+||.+.
T Consensus 3 ~~d~y~~lgv~~~a--~~~eik~ayr~la~~~HPD~~~~~--~~~~~~f~~~~~Ay~vL~d~~~r 63 (366)
T PRK14294 3 KRDYYEILGVTRDA--SEEEIKKSYRKLAMKYHPDRNPGD--KEAEELFKEAAEAYEVLSDPKKR 63 (366)
T ss_pred CCChHHHhCCCCCC--CHHHHHHHHHHHHHHHCCCCCCCc--hHHHHHHHHHHHHHHHhccHHHH
Confidence 36999999999999 999999999999999999999764 56899999999999999999763
No 26
>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.51 E-value=1.2e-14 Score=134.25 Aligned_cols=62 Identities=34% Similarity=0.486 Sum_probs=58.0
Q ss_pred ccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCCCC
Q 024259 205 MASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAVD 270 (270)
Q Consensus 205 ~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k~~ 270 (270)
-.++|+||||++++ +.++||++||+|+++||||+++++ +++.++|++||.||+||+||.+++
T Consensus 30 ~~~LYdVLgl~k~a--t~d~IKKaYR~L~~k~HPD~~gd~--P~~~dkf~eIN~Ay~ILsD~~kR~ 91 (279)
T KOG0716|consen 30 RLDLYDVLGLPKTA--TKDEIKKAYRKLALKYHPDKNGDN--PEATDKFKEINTAYAILSDPTKRN 91 (279)
T ss_pred hhHHHHHhCCCccc--chHHHHHHHHHHHHHhCCCcCCCC--chhHHHHHHHHHHHHHhcChhhhh
Confidence 45799999999999 999999999999999999999986 789999999999999999998753
No 27
>PRK10767 chaperone protein DnaJ; Provisional
Probab=99.51 E-value=1.8e-14 Score=137.71 Aligned_cols=61 Identities=38% Similarity=0.564 Sum_probs=56.0
Q ss_pred ccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCCC
Q 024259 205 MASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 205 ~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
..+||+||||+++| +.++||+|||+||++||||+++++ +.|+++|++|++||++|+||.+.
T Consensus 3 ~~d~y~iLgv~~~a--s~~eik~ayr~la~~~HPD~~~~~--~~a~~~f~~i~~Ay~~L~d~~~r 63 (371)
T PRK10767 3 KRDYYEVLGVSRNA--SEDEIKKAYRKLAMKYHPDRNPGD--KEAEEKFKEIKEAYEVLSDPQKR 63 (371)
T ss_pred CCChHHhcCCCCCC--CHHHHHHHHHHHHHHHCCCCCCCc--HHHHHHHHHHHHHHHHhcchhhh
Confidence 36999999999999 999999999999999999998754 56899999999999999999864
No 28
>PRK14280 chaperone protein DnaJ; Provisional
Probab=99.51 E-value=1.3e-14 Score=139.11 Aligned_cols=59 Identities=36% Similarity=0.501 Sum_probs=55.2
Q ss_pred cccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCCC
Q 024259 206 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 206 ~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
.+||+||||+++| +.++||+|||+||++||||+++. +.|+++|++|++||+||+||++.
T Consensus 4 ~~~y~iLgv~~~a--~~~eik~ayr~la~~~HpD~~~~---~~a~~~f~~i~~Ay~vL~d~~kr 62 (376)
T PRK14280 4 RDYYEVLGVSKSA--SKDEIKKAYRKLSKKYHPDINKE---EGADEKFKEISEAYEVLSDDQKR 62 (376)
T ss_pred CChHHhhCCCCCC--CHHHHHHHHHHHHHHHCcCCCCC---ccHHHHHHHHHHHHHHhccHhHH
Confidence 6999999999999 99999999999999999999875 46899999999999999999864
No 29
>PRK14284 chaperone protein DnaJ; Provisional
Probab=99.51 E-value=1.5e-14 Score=139.33 Aligned_cols=59 Identities=39% Similarity=0.595 Sum_probs=55.2
Q ss_pred ccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCCC
Q 024259 207 SDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 207 d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
+||+||||+++| +.++||+|||+||++||||+++++ +.|+++|++|++||+||+||++.
T Consensus 2 d~y~iLgv~~~a--~~~eikkayr~la~~~HPD~~~~~--~~a~~~f~~i~~Ay~vL~d~~kR 60 (391)
T PRK14284 2 DYYTILGVSKTA--SPEEIKKAYRKLAVKYHPDKNPGD--AEAEKRFKEVSEAYEVLSDAQKR 60 (391)
T ss_pred CHHHhcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCCc--hHHHHHHHHHHHHHHHhcCHHHH
Confidence 799999999999 999999999999999999999864 57999999999999999999764
No 30
>PRK14291 chaperone protein DnaJ; Provisional
Probab=99.50 E-value=1.4e-14 Score=139.24 Aligned_cols=59 Identities=39% Similarity=0.505 Sum_probs=55.1
Q ss_pred cccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCCC
Q 024259 206 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 206 ~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
.+||+||||+++| +.++||+|||+||++||||++++ +.|+++|++|++||+||+||.+.
T Consensus 3 ~d~Y~~Lgv~~~a--~~~~ik~ayr~la~~~HPD~~~~---~~~~~~f~~i~~Ay~vLsd~~kR 61 (382)
T PRK14291 3 KDYYEILGVSRNA--TQEEIKKAYRRLARKYHPDFNKN---PEAEEKFKEINEAYQVLSDPEKR 61 (382)
T ss_pred CCHHHhhCCCCCC--CHHHHHHHHHHHHHHHCCCCCCC---ccHHHHHHHHHHHHHHhcCHHHH
Confidence 5899999999999 99999999999999999999876 56899999999999999999764
No 31
>PRK14281 chaperone protein DnaJ; Provisional
Probab=99.50 E-value=1.9e-14 Score=139.03 Aligned_cols=60 Identities=35% Similarity=0.531 Sum_probs=55.6
Q ss_pred cccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCCC
Q 024259 206 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 206 ~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
.+||+||||++++ +.++||+|||+||++||||++++. ..|+++|++|++||++|+||.+.
T Consensus 3 ~d~y~iLgv~~~a--~~~eikkayr~la~~~HPD~~~~~--~~a~~~f~~i~~Ay~vL~d~~~r 62 (397)
T PRK14281 3 RDYYEVLGVSRSA--DKDEIKKAYRKLALKYHPDKNPDN--KEAEEHFKEVNEAYEVLSNDDKR 62 (397)
T ss_pred CChhhhcCCCCCC--CHHHHHHHHHHHHHHHCCCcCCCc--hHHHHHHHHHHHHHHHhhhhhhh
Confidence 5899999999999 999999999999999999998764 56899999999999999999863
No 32
>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.48 E-value=2.6e-14 Score=133.97 Aligned_cols=61 Identities=34% Similarity=0.513 Sum_probs=57.3
Q ss_pred ccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCCC
Q 024259 205 MASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 205 ~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
..+||+||||.+++ +..+|++|||..|++|||||++++ +.|.++|+.|.+||+||+|+.++
T Consensus 4 ~~dyY~lLgi~~~a--t~~eIkKaYr~kaL~~HPDKNp~d--P~A~ekFq~L~eAy~VL~D~~~R 64 (296)
T KOG0691|consen 4 DTDYYDLLGISEDA--TDAEIKKAYRKKALQYHPDKNPGD--PQAAEKFQELSEAYEVLSDEESR 64 (296)
T ss_pred cchHHHHhCCCCCC--CHHHHHHHHHHHHHhcCCCCCCCC--hHHHHHHHHHHHHHHHhcCHHHH
Confidence 57999999999999 999999999999999999999998 45999999999999999999753
No 33
>PRK14290 chaperone protein DnaJ; Provisional
Probab=99.48 E-value=3.8e-14 Score=135.40 Aligned_cols=61 Identities=44% Similarity=0.603 Sum_probs=55.9
Q ss_pred cccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCCC
Q 024259 206 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 206 ~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
.+||+||||+++| +.+|||+|||+||++||||+++++. +.|+++|++|++||++|+||.+.
T Consensus 3 ~d~y~vLgv~~~a--~~~eik~ayr~la~~~HPD~~~~~~-~~a~~~f~~i~~Ay~~L~d~~~r 63 (365)
T PRK14290 3 KDYYKILGVDRNA--SQEDIKKAFRELAKKWHPDLHPGNK-AEAEEKFKEISEAYEVLSDPQKR 63 (365)
T ss_pred CChhhhcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCCch-hHHHHHHHHHHHHHHHhcChhhh
Confidence 5899999999999 9999999999999999999987542 47999999999999999999864
No 34
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.46 E-value=4.1e-14 Score=138.66 Aligned_cols=66 Identities=35% Similarity=0.425 Sum_probs=60.4
Q ss_pred CCCccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-CChHHHHHHHHHHHHHHHHccCCCCC
Q 024259 202 ESDMASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQG-SSKAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 202 ~~~~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~-~~k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
..+..++|.+|+|+++| |.+||++|||++++.|||||+.+ +.++.|+++|+.|..||+||+||.+.
T Consensus 5 e~~e~e~Ya~LNlpkdA--t~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kR 71 (546)
T KOG0718|consen 5 ELDEIELYALLNLPKDA--TDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKR 71 (546)
T ss_pred ccchhhHHHHhCCCccc--CHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHH
Confidence 45567999999999999 99999999999999999999985 45788999999999999999999874
No 35
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=99.46 E-value=4.7e-14 Score=131.76 Aligned_cols=60 Identities=30% Similarity=0.455 Sum_probs=55.3
Q ss_pred ccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCCC
Q 024259 205 MASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 205 ~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
..+||+||||++++ +.++||+|||+||++||||+++. ..++++|++|++||++|+||.+.
T Consensus 3 ~~d~y~~Lgv~~~a--~~~eik~ayr~la~k~HPD~~~~---~~~~~~f~~i~~Ay~~L~~~~kr 62 (306)
T PRK10266 3 LKDYYAIMGVKPTD--DLKTIKTAYRRLARKYHPDVSKE---PDAEARFKEVAEAWEVLSDEQRR 62 (306)
T ss_pred cCChHHHcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCC---ccHHHHHHHHHHHHHHhhhHHHH
Confidence 36999999999999 99999999999999999999765 46999999999999999999764
No 36
>PRK14289 chaperone protein DnaJ; Provisional
Probab=99.45 E-value=7.6e-14 Score=134.09 Aligned_cols=59 Identities=36% Similarity=0.601 Sum_probs=55.5
Q ss_pred cccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCC
Q 024259 206 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLA 268 (270)
Q Consensus 206 ~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k 268 (270)
.+||+||||++++ +.+|||+|||+||++||||+++++ ++|+++|++|++||++|+||.+
T Consensus 5 ~~~y~~Lgv~~~a--~~~eik~ayr~la~~~HpD~~~~~--~~a~~~f~~i~~Ay~~L~d~~~ 63 (386)
T PRK14289 5 RDYYEVLGVSKTA--TVDEIKKAYRKKAIQYHPDKNPGD--KEAEEKFKEAAEAYDVLSDPDK 63 (386)
T ss_pred CCHHHHcCCCCCC--CHHHHHHHHHHHHHHHCCCCCCCC--hHHHHHHHHHHHHHHHhcCHHH
Confidence 6999999999999 999999999999999999999864 5799999999999999999975
No 37
>PRK14292 chaperone protein DnaJ; Provisional
Probab=99.45 E-value=8.3e-14 Score=133.09 Aligned_cols=59 Identities=36% Similarity=0.514 Sum_probs=55.2
Q ss_pred cccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCCC
Q 024259 206 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 206 ~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
.+||+||||++++ +.++||+|||+||++||||+++. +.++++|++|++||++|+||++.
T Consensus 2 ~d~y~~Lgv~~~a--~~~~ik~ayr~l~~~~hpD~~~~---~~a~~~~~~i~~Ay~vL~d~~~r 60 (371)
T PRK14292 2 MDYYELLGVSRTA--SADEIKSAYRKLALKYHPDRNKE---KGAAEKFAQINEAYAVLSDAEKR 60 (371)
T ss_pred CChHHHcCCCCCC--CHHHHHHHHHHHHHHHCCCCCCC---hhHHHHHHHHHHHHHHhcchhhh
Confidence 5899999999999 99999999999999999999874 57999999999999999999864
No 38
>PRK14300 chaperone protein DnaJ; Provisional
Probab=99.44 E-value=7.5e-14 Score=133.73 Aligned_cols=59 Identities=36% Similarity=0.441 Sum_probs=54.6
Q ss_pred cccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCCC
Q 024259 206 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 206 ~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
.+||+||||++++ +.+|||+|||+||++||||+++. ..++++|++|++||++|+||.+.
T Consensus 3 ~~~y~iLgv~~~a--s~~eik~ayr~la~~~HPD~~~~---~~~~~~f~~i~~Ay~~L~d~~~r 61 (372)
T PRK14300 3 QDYYQILGVSKTA--SQADLKKAYLKLAKQYHPDTTDA---KDAEKKFKEINAAYDVLKDEQKR 61 (372)
T ss_pred CChHHHcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCC---cCHHHHHHHHHHHHHHhhhHhHh
Confidence 5899999999999 99999999999999999999874 45889999999999999999864
No 39
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.44 E-value=8.8e-14 Score=129.79 Aligned_cols=59 Identities=34% Similarity=0.485 Sum_probs=55.7
Q ss_pred cccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCCC
Q 024259 206 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 206 ~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
.+||+||||++++ +..|||+||++||++||||.+.+ ..|+++|++|.+||++|+|+++.
T Consensus 43 ~d~Y~vLgv~~~A--t~~EIK~Af~~LaKkyHPD~n~~---~~a~~kF~eI~~AYEiLsd~eKR 101 (288)
T KOG0715|consen 43 EDYYKVLGVSRNA--TLSEIKSAFRKLAKKYHPDVNKD---KEASKKFKEISEAYEILSDEEKR 101 (288)
T ss_pred cchhhhhCcCCCC--CHHHHHHHHHHHHHhhCCCCCCC---cchhhHHHHHHHHHHHhcCHHHH
Confidence 3999999999999 99999999999999999999988 47999999999999999999864
No 40
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=99.43 E-value=1.5e-13 Score=115.47 Aligned_cols=64 Identities=47% Similarity=0.664 Sum_probs=57.6
Q ss_pred CCccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCCC
Q 024259 203 SDMASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 203 ~~~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
....++|+||||++++ +..+|++|||++|++||||++++... .++++|+.|++||++|+|+.+.
T Consensus 3 ~~~~~~y~iLgv~~~a--s~~eik~ayrkla~~~HPD~~~~~~~-~a~~~f~~i~~Ay~vLsd~~~r 66 (237)
T COG2214 3 SDLLDYYEILGVPPNA--SLEEIKKAYRKLALKYHPDRNPGDPK-VAEEKFKEINEAYEILSDPERR 66 (237)
T ss_pred hhhhhHHHHhCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCchh-HHHHHHHHHHHHHHHhhCHHHH
Confidence 3457899999999999 99999999999999999999997632 5999999999999999998653
No 41
>PRK14293 chaperone protein DnaJ; Provisional
Probab=99.41 E-value=1.5e-13 Score=131.67 Aligned_cols=59 Identities=34% Similarity=0.486 Sum_probs=54.7
Q ss_pred cccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCCC
Q 024259 206 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 206 ~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
.+||+||||++++ +.++||+|||+||++||||+++. +.++++|++|++||++|+||++.
T Consensus 3 ~d~y~vLgv~~~a--~~~eik~ayr~la~~~HPD~~~~---~~a~~~f~~i~~Ay~vL~~~~~R 61 (374)
T PRK14293 3 ADYYEILGVSRDA--DKDELKRAYRRLARKYHPDVNKE---PGAEDRFKEINRAYEVLSDPETR 61 (374)
T ss_pred CChhhhcCCCCCC--CHHHHHHHHHHHHHHHCCCCCCC---cCHHHHHHHHHHHHHHHhchHHH
Confidence 5899999999999 99999999999999999999875 45889999999999999999863
No 42
>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.40 E-value=1.4e-13 Score=125.31 Aligned_cols=64 Identities=30% Similarity=0.424 Sum_probs=59.0
Q ss_pred CccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCCC
Q 024259 204 DMASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 204 ~~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
...+.|+||||..++ +..+|++||++|+++||||+++...+.+|.++|+.|+.||+||+|.+++
T Consensus 12 ~~~d~YevLGVer~a--~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR 75 (264)
T KOG0719|consen 12 NKKDLYEVLGVERDA--TDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKR 75 (264)
T ss_pred cccCHHHHhhhcccC--CHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 345999999999999 9999999999999999999998766788999999999999999998753
No 43
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional
Probab=99.36 E-value=5.4e-13 Score=139.94 Aligned_cols=60 Identities=23% Similarity=0.256 Sum_probs=55.6
Q ss_pred ccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCCC
Q 024259 205 MASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 205 ~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
..+||+||||+++| +..+||+|||+||++||||+++++ .|.++|+.|++||+||+||.++
T Consensus 572 d~dYYdILGVs~dA--S~~EIKKAYRKLAlkyHPDKN~~~---~A~ekFq~I~EAYeVLSDp~kR 631 (1136)
T PTZ00341 572 DTLFYDILGVGVNA--DMKEISERYFKLAENYYPPKRSGN---EGFHKFKKINEAYQILGDIDKK 631 (1136)
T ss_pred CCChHHHcCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCc---hHHHHHHHHHHHHHHhCCHHHH
Confidence 47899999999999 999999999999999999999873 5888999999999999999764
No 44
>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.33 E-value=1.5e-12 Score=117.35 Aligned_cols=63 Identities=32% Similarity=0.459 Sum_probs=56.7
Q ss_pred CCccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCCC
Q 024259 203 SDMASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 203 ~~~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
...-|.|+||||++++ ++.|||+|||+|+++|||||++.. .+.++.|..|.+||+.|+|++.+
T Consensus 96 ~~~fDPyEILGl~pga--s~~eIKkaYR~LSik~HPDK~~~~--~~~e~~~~~I~KAY~aLTD~~sr 158 (230)
T KOG0721|consen 96 RQKFDPYEILGLDPGA--SEKEIKKAYRRLSIKYHPDKQPPE--EGDEEFFEAIAKAYQALTDKKSR 158 (230)
T ss_pred hhcCCcHHhhCCCCCC--CHHHHHHHHHHhhhhhCCCcCCCc--chhHHHHHHHHHHHHHhcchhhH
Confidence 3446899999999999 999999999999999999999874 46888999999999999998764
No 45
>PRK05014 hscB co-chaperone HscB; Provisional
Probab=99.32 E-value=2.9e-12 Score=111.36 Aligned_cols=63 Identities=22% Similarity=0.272 Sum_probs=55.1
Q ss_pred ccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHHHHHHHHHccCCCCC
Q 024259 207 SDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSS---KAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 207 d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~---k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
+||+||||++...++..+|+++||++++++|||+..+.. +..+.+.|..|++||++|+||.+.
T Consensus 2 ~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~R 67 (171)
T PRK05014 2 DYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKR 67 (171)
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHH
Confidence 799999999986669999999999999999999987543 234788999999999999999753
No 46
>PRK00294 hscB co-chaperone HscB; Provisional
Probab=99.26 E-value=1e-11 Score=108.46 Aligned_cols=66 Identities=26% Similarity=0.268 Sum_probs=58.2
Q ss_pred CccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHHHHHHHHHccCCCCC
Q 024259 204 DMASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSS---KAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 204 ~~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~---k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
...+||++|||++...++..+|+++||++++++|||++.+.. +..+.+.+..||+||++|+||.+.
T Consensus 2 ~~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~R 70 (173)
T PRK00294 2 GTPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRR 70 (173)
T ss_pred CCCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhh
Confidence 457899999999998889999999999999999999987643 345788999999999999999764
No 47
>PRK01356 hscB co-chaperone HscB; Provisional
Probab=99.26 E-value=5.9e-12 Score=109.14 Aligned_cols=64 Identities=25% Similarity=0.243 Sum_probs=54.4
Q ss_pred cccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHHHHHHHHccCCCCC
Q 024259 206 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSS-KAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 206 ~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~-k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
.+||+||||++...++..+|+++|+++++++|||+..... +..+.+.+..|++||++|+||.++
T Consensus 2 ~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~R 66 (166)
T PRK01356 2 QNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKR 66 (166)
T ss_pred CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHH
Confidence 5899999999986669999999999999999999987532 233556789999999999999753
No 48
>PRK03578 hscB co-chaperone HscB; Provisional
Probab=99.25 E-value=1.4e-11 Score=107.69 Aligned_cols=65 Identities=31% Similarity=0.334 Sum_probs=55.5
Q ss_pred ccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHHHHHHHHHccCCCCC
Q 024259 205 MASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSS---KAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 205 ~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~---k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
..+||+||||++...++..+|+++|++|++++|||+++... +..+.+.+..||+||++|+||.+.
T Consensus 5 ~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~R 72 (176)
T PRK03578 5 KDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKR 72 (176)
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhH
Confidence 36999999999987679999999999999999999987543 223566789999999999999754
No 49
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=99.25 E-value=7.6e-12 Score=115.54 Aligned_cols=63 Identities=25% Similarity=0.364 Sum_probs=55.0
Q ss_pred CCCccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----CChHHHHHHHHHHHHHHHHccCC
Q 024259 202 ESDMASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQG-----SSKAVAEEKFKLCSAAYQSLCDK 266 (270)
Q Consensus 202 ~~~~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~-----~~k~~AeekFk~I~eAYevLsDp 266 (270)
.....++|+||||++++ +.++||+|||+|+++||||+..+ +..+.++++|++|++||++|+..
T Consensus 196 ~~~~~~ay~vLgv~~~a--s~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~~ 263 (267)
T PRK09430 196 GPTLEDAYKVLGVSESD--DDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKKQ 263 (267)
T ss_pred CCcHHhHHHHcCCCCCC--CHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHh
Confidence 35668999999999999 99999999999999999999743 12356999999999999999853
No 50
>PHA03102 Small T antigen; Reviewed
Probab=99.22 E-value=9.1e-12 Score=107.11 Aligned_cols=58 Identities=28% Similarity=0.314 Sum_probs=51.2
Q ss_pred ccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCC
Q 024259 205 MASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLA 268 (270)
Q Consensus 205 ~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k 268 (270)
...+|+||||++++-.+.++||+|||++|+++|||+++ .+++|++|++||++|+|+.+
T Consensus 4 ~~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg------~~e~~k~in~Ay~~L~d~~~ 61 (153)
T PHA03102 4 SKELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGG------DEEKMKELNTLYKKFRESVK 61 (153)
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCc------hhHHHHHHHHHHHHHhhHHH
Confidence 45789999999987669999999999999999999964 34699999999999999865
No 51
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]
Probab=99.18 E-value=1.3e-11 Score=118.73 Aligned_cols=67 Identities=33% Similarity=0.415 Sum_probs=61.8
Q ss_pred CCCCccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHHHHHHHHccCCCCC
Q 024259 201 SESDMASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSS-KAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 201 ~~~~~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~-k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
.+...+|||+||||.++| +..||.+|||++|++||||-.++.. +..|+.+|.-|..|-+||+||+++
T Consensus 389 kqs~kRDYYKILGVkRnA--sKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkR 456 (504)
T KOG0624|consen 389 KQSGKRDYYKILGVKRNA--SKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKR 456 (504)
T ss_pred HHhccchHHHHhhhcccc--cHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHH
Confidence 467789999999999999 9999999999999999999998765 667999999999999999999874
No 52
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=99.18 E-value=2.2e-11 Score=125.54 Aligned_cols=59 Identities=25% Similarity=0.342 Sum_probs=54.7
Q ss_pred cccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCCC
Q 024259 206 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 206 ~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
.+||+||||++++ +..+||+|||+|+++||||++++ +.+.++|++|++||++|+||.++
T Consensus 2 ~DYYeVLGVs~dA--S~eEIKKAYRKLAKKyHPDKn~~---~eAeekFqeINEAYEVLSDP~KR 60 (871)
T TIGR03835 2 RDYYEVLGIDRDA--DEQEIKKAFRKLAKKYHPDRNKA---PDAASIFAEINEANDVLSNPKKR 60 (871)
T ss_pred CChhHhcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCC---hhHHHHHHHHHHHHHHhCCHHHH
Confidence 5899999999999 99999999999999999999876 56889999999999999998753
No 53
>PTZ00100 DnaJ chaperone protein; Provisional
Probab=99.16 E-value=3.8e-11 Score=99.10 Aligned_cols=54 Identities=19% Similarity=0.201 Sum_probs=47.7
Q ss_pred CCccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHcc
Q 024259 203 SDMASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLC 264 (270)
Q Consensus 203 ~~~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLs 264 (270)
....++|+||||++++ +.++|+++||+|++++|||+. + ..+.|++|++||++|.
T Consensus 62 Ms~~eAy~ILGv~~~A--s~~eIkkaYRrLa~~~HPDkg-G-----s~~~~~kIneAyevL~ 115 (116)
T PTZ00100 62 MSKSEAYKILNISPTA--SKERIREAHKQLMLRNHPDNG-G-----STYIASKVNEAKDLLL 115 (116)
T ss_pred CCHHHHHHHcCCCCCC--CHHHHHHHHHHHHHHhCCCCC-C-----CHHHHHHHHHHHHHHh
Confidence 3457999999999999 999999999999999999984 3 3467899999999985
No 54
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.09 E-value=6.3e-11 Score=104.59 Aligned_cols=62 Identities=42% Similarity=0.564 Sum_probs=56.1
Q ss_pred ccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCCC
Q 024259 205 MASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 205 ~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
..++|.||||.+++ +..+|++||+.+|++||||+++.. ...++++|++|.+||++|+||.+.
T Consensus 2 ~~d~~~~l~i~~~a--s~~~i~ka~~~~a~~~hpdk~~~~-~~~~~~~~~~~~ea~~~ls~~~kr 63 (306)
T KOG0714|consen 2 GKDYYKILGIARSA--SEEDIKKAYRKLALKYHPDKNPSP-KEVAEAKFKEIAEAYEVLSDPKKR 63 (306)
T ss_pred cccHHHHhCccccc--cHHHHHHHHHHHHHhhCCCCCCCc-hhhHHHHHhhhhccccccCCHHHh
Confidence 35899999999999 888999999999999999998876 567877999999999999999764
No 55
>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.04 E-value=1.7e-10 Score=113.14 Aligned_cols=63 Identities=30% Similarity=0.380 Sum_probs=58.2
Q ss_pred CCCccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCCC
Q 024259 202 ESDMASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 202 ~~~~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
..+..|+|.||||+++. ++++||+.||++|...||||+.. +.|+|.|+.|..||++|+|+.+.
T Consensus 231 e~~~~daYsvlGl~~d~--sd~~lKk~Yrk~A~LVhPDKn~~---~~A~Eafk~Lq~Afevig~~~kR 293 (490)
T KOG0720|consen 231 ELNILDAYSALGLPSDC--SDADLKKNYRKKAMLVHPDKNMI---PRAEEAFKKLQVAFEVIGDSVKR 293 (490)
T ss_pred hhcCCCchhhcCCCCCC--CHHHHHHHHHhhceEeCCCccCC---hhHHHHHHHHHHHHHHhcchhhh
Confidence 34478999999999999 99999999999999999999985 78999999999999999999764
No 56
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.01 E-value=2e-10 Score=112.08 Aligned_cols=63 Identities=37% Similarity=0.512 Sum_probs=58.5
Q ss_pred CCccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCC
Q 024259 203 SDMASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLA 268 (270)
Q Consensus 203 ~~~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k 268 (270)
..-.+||.||||..++ +..+||+|||++|+.||||++.++ +.+++.+|++|-+||.+|+||.+
T Consensus 370 SkRkd~ykilGi~~~a--s~~eikkayrk~AL~~Hpd~~ags-q~eaE~kFkevgeAy~il~d~~k 432 (486)
T KOG0550|consen 370 SKRKDWYKILGISRNA--SDDEIKKAYRKLALVHHPDKNAGS-QKEAEAKFKEVGEAYTILSDPMK 432 (486)
T ss_pred hhhhhHHHHhhhhhhc--ccchhhhHHHHHHHHhCCCcCcch-hHHHHHHHHHHHHHHHHhcCHHH
Confidence 3456899999999999 999999999999999999999987 57899999999999999999975
No 57
>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.99 E-value=1.8e-10 Score=106.65 Aligned_cols=61 Identities=25% Similarity=0.381 Sum_probs=55.7
Q ss_pred CCccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCC
Q 024259 203 SDMASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLA 268 (270)
Q Consensus 203 ~~~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k 268 (270)
.+..++|+||||..++ +..+|.+|||+||++||||++.+ +++.+.|+.|..||++|.|.+.
T Consensus 30 CG~enCYdVLgV~Rea--~KseIakAYRqLARrhHPDr~r~---~e~k~~F~~iAtayeilkd~e~ 90 (329)
T KOG0722|consen 30 CGAENCYDVLGVAREA--NKSEIAKAYRQLARRHHPDRNRD---PESKKLFVKIATAYEILKDNET 90 (329)
T ss_pred ccchhHHHHhhhhhhc--cHHHHHHHHHHHHHHhCCcccCC---chhhhhhhhhhcccccccchhh
Confidence 4567999999999999 99999999999999999999998 4567999999999999999764
No 58
>PRK01773 hscB co-chaperone HscB; Provisional
Probab=98.87 E-value=3.5e-09 Score=92.60 Aligned_cols=63 Identities=22% Similarity=0.143 Sum_probs=56.4
Q ss_pred cccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHHHHHHHHHccCCCC
Q 024259 206 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSS---KAVAEEKFKLCSAAYQSLCDKLA 268 (270)
Q Consensus 206 ~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~---k~~AeekFk~I~eAYevLsDp~k 268 (270)
.+||++|||++...++...|+++|+.|.+++|||+....+ +..+.+.-..||+||++|.||.+
T Consensus 2 ~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~ 67 (173)
T PRK01773 2 NNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPIL 67 (173)
T ss_pred CChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHH
Confidence 5899999999998889999999999999999999987654 34577889999999999999975
No 59
>PHA02624 large T antigen; Provisional
Probab=98.83 E-value=2.6e-09 Score=108.81 Aligned_cols=58 Identities=26% Similarity=0.285 Sum_probs=51.0
Q ss_pred ccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCC
Q 024259 205 MASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLA 268 (270)
Q Consensus 205 ~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k 268 (270)
..++|+||||++++=.+..+||+|||++|++||||+.+ .+++|++|++||++|+|+.+
T Consensus 10 ~~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgG------deekfk~Ln~AYevL~d~~k 67 (647)
T PHA02624 10 SKELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGG------DEEKMKRLNSLYKKLQEGVK 67 (647)
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCC------cHHHHHHHHHHHHHHhcHHH
Confidence 56899999999976458999999999999999999953 36799999999999999764
No 60
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]
Probab=98.82 E-value=2.3e-09 Score=105.61 Aligned_cols=62 Identities=31% Similarity=0.439 Sum_probs=56.9
Q ss_pred ccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---CChHHHHHHHHHHHHHHHHccCCCC
Q 024259 205 MASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQG---SSKAVAEEKFKLCSAAYQSLCDKLA 268 (270)
Q Consensus 205 ~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~---~~k~~AeekFk~I~eAYevLsDp~k 268 (270)
.-|.|+||||..++ +..+||++||+|+.++||||.+. ..+.+.++++++|++||..|+|.+.
T Consensus 97 ~fDPyEILGI~~~t--s~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k~ 161 (610)
T COG5407 97 GFDPYEILGIDQDT--SERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKKR 161 (610)
T ss_pred CCChHHhhcccCCC--cHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHHH
Confidence 34899999999999 99999999999999999999886 5578899999999999999999753
No 61
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB. This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.
Probab=98.66 E-value=3.8e-08 Score=84.62 Aligned_cols=50 Identities=28% Similarity=0.414 Sum_probs=43.3
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHHHHHHHHHccCCCCC
Q 024259 220 LKLEDVKLAYRVCALKWHPDRHQGSS---KAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 220 lt~~eIKkAYRkLAlk~HPDK~~~~~---k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
++..+|+++|+++++++|||+++... +..+.+.+..||+||++|+||.++
T Consensus 3 iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~R 55 (157)
T TIGR00714 3 LDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMR 55 (157)
T ss_pred CCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhh
Confidence 58889999999999999999976543 345888999999999999999864
No 62
>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.54 E-value=7.8e-08 Score=86.64 Aligned_cols=61 Identities=23% Similarity=0.302 Sum_probs=55.8
Q ss_pred CccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCC
Q 024259 204 DMASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKL 267 (270)
Q Consensus 204 ~~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~ 267 (270)
-..+.|+||.|.|+. +.++||+.||+|++..|||+++++. +.|...|-.|..||.+|-|+.
T Consensus 51 fnLNpfeVLqIdpev--~~edikkryRklSilVHPDKN~Dd~-~rAqkAFdivkKA~k~l~n~~ 111 (250)
T KOG1150|consen 51 FNLNPFEVLQIDPEV--TDEDIKKRYRKLSILVHPDKNPDDA-ERAQKAFDIVKKAYKLLENDK 111 (250)
T ss_pred cccChHHHHhcCCCC--CHHHHHHHHHhhheeecCCCCcccH-HHHHHHHHHHHHHHHHHhCHH
Confidence 346899999999999 9999999999999999999999864 679999999999999998875
No 63
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=98.53 E-value=1.4e-07 Score=89.69 Aligned_cols=35 Identities=37% Similarity=0.600 Sum_probs=33.3
Q ss_pred ccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC
Q 024259 207 SDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQG 243 (270)
Q Consensus 207 d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~ 243 (270)
+||+||||++++ +.++||+|||+||++||||+++.
T Consensus 1 d~y~~Lgv~~~a--~~~~ik~ayr~la~~~HPD~~~~ 35 (354)
T TIGR02349 1 DYYEILGVSKDA--SEEEIKKAYRKLAKKYHPDRNKD 35 (354)
T ss_pred ChHHhCCCCCCC--CHHHHHHHHHHHHHHHCCCCCCC
Confidence 689999999999 99999999999999999999873
No 64
>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]
Probab=98.33 E-value=4.8e-07 Score=96.44 Aligned_cols=67 Identities=24% Similarity=0.346 Sum_probs=54.9
Q ss_pred cccccccCCCCccccchhcCcCCC-CCC-CHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccC
Q 024259 194 FEEESESSESDMASDRQTLGLCAS-GPL-KLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCD 265 (270)
Q Consensus 194 ~~~e~~~~~~~~~d~YeVLGL~~~-a~l-t~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsD 265 (270)
.+-|..+......+.|+||.|+-+ .+. +.+.||++|++||.+|||||+|. ..++|..+++||+.|+.
T Consensus 1269 ~ElekKP~~mS~d~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNPE-----GRemFe~VnKAYE~L~~ 1337 (2235)
T KOG1789|consen 1269 NELEKKPATMSVDLAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNPE-----GREMFERVNKAYELLSS 1337 (2235)
T ss_pred HHHhcCCCccchHHHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCch-----HHHHHHHHHHHHHHHHH
Confidence 344456667777889999999843 323 34889999999999999999974 78999999999999984
No 65
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
Probab=98.17 E-value=9.3e-07 Score=82.99 Aligned_cols=68 Identities=22% Similarity=0.238 Sum_probs=55.2
Q ss_pred ccCCCCccccchhcCcCC---CCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCC
Q 024259 199 ESSESDMASDRQTLGLCA---SGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLA 268 (270)
Q Consensus 199 ~~~~~~~~d~YeVLGL~~---~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k 268 (270)
+...-...++|.+|||+. -+ +..+|.+|.++.+.+||||+........+.+.|++|..||+||+|+..
T Consensus 36 d~k~Wk~~DlYa~lgLskyR~ka--~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~~ 106 (379)
T COG5269 36 DFKNWKKVDLYALLGLSKYRTKA--IPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKL 106 (379)
T ss_pred hhhhhhhhhHHHHhchHhhhcCC--CcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHHH
Confidence 344555689999999984 34 778899999999999999997432225688999999999999999864
No 66
>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=97.84 E-value=2e-05 Score=72.90 Aligned_cols=55 Identities=20% Similarity=0.296 Sum_probs=49.4
Q ss_pred ccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHH-Hcc
Q 024259 205 MASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQ-SLC 264 (270)
Q Consensus 205 ~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYe-vLs 264 (270)
...+|.||||..++ +.++|+.||..||+++|||-..+ +...+.|.+|.+||. ||.
T Consensus 46 ~~e~fril~v~e~~--~adevr~af~~lakq~hpdsgs~---~adaa~f~qideafrkvlq 101 (342)
T KOG0568|consen 46 IMECFRILGVEEGA--DADEVREAFHDLAKQVHPDSGSE---EADAARFIQIDEAFRKVLQ 101 (342)
T ss_pred HHHHHHHhcccccC--chhHHHHHHHHHHHHcCCCCCCc---cccHHHHHHHHHHHHHHHH
Confidence 45799999999999 99999999999999999998765 567789999999998 765
No 67
>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=97.16 E-value=0.00072 Score=55.60 Aligned_cols=53 Identities=25% Similarity=0.170 Sum_probs=43.8
Q ss_pred cccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCC
Q 024259 206 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDK 266 (270)
Q Consensus 206 ~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp 266 (270)
...-.||||.++. +.+.||.|+|++.+..|||+...+ - .=..||+|+++|...
T Consensus 56 ~EA~lIL~v~~s~--~k~KikeaHrriM~~NHPD~GGSP---Y---lAsKINEAKdlLe~~ 108 (112)
T KOG0723|consen 56 REAALILGVTPSL--DKDKIKEAHRRIMLANHPDRGGSP---Y---LASKINEAKDLLEGT 108 (112)
T ss_pred HHHHHHhCCCccc--cHHHHHHHHHHHHHcCCCcCCCCH---H---HHHHHHHHHHHHhcc
Confidence 3556799999999 999999999999999999997652 2 224799999999754
No 68
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=96.80 E-value=0.00088 Score=58.24 Aligned_cols=56 Identities=23% Similarity=0.359 Sum_probs=49.2
Q ss_pred cccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHHHHHHHHHc
Q 024259 206 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSS-----KAVAEEKFKLCSAAYQSL 263 (270)
Q Consensus 206 ~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~-----k~~AeekFk~I~eAYevL 263 (270)
.+.|.+||+...+ ...+|+++|+.+...+|||+..... ...+++++++|++||+.+
T Consensus 113 ~~~l~~l~~~~~~--~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~ 173 (174)
T COG1076 113 EDALKVLGVEIKA--DQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI 173 (174)
T ss_pred hhHHHHhcCchhh--hHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence 7899999999999 9999999999999999999965321 345899999999999865
No 69
>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]
Probab=96.52 E-value=0.0033 Score=62.72 Aligned_cols=45 Identities=36% Similarity=0.466 Sum_probs=35.8
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHHHHHHHHHcc
Q 024259 220 LKLEDVKLAYRVCALKWHPDRHQGSS-----KAVAEEKFKLCSAAYQSLC 264 (270)
Q Consensus 220 lt~~eIKkAYRkLAlk~HPDK~~~~~-----k~~AeekFk~I~eAYevLs 264 (270)
++.++||++||+.+|..||||.++.. +-.|++.|-.+.+|++...
T Consensus 400 Vtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~eawn~f~ 449 (453)
T KOG0431|consen 400 VTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALSEAWNKFN 449 (453)
T ss_pred cCHHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHHHHHHhhh
Confidence 38899999999999999999998642 3347777888888877543
No 70
>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=96.08 E-value=0.0045 Score=54.14 Aligned_cols=67 Identities=27% Similarity=0.220 Sum_probs=54.9
Q ss_pred CCccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHHHHHHHHHccCCCCC
Q 024259 203 SDMASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSS---KAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 203 ~~~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~---k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
.....||.++|.....++..+.++.-|--...+.|||+..... ...|.+...+|++||..|.||+++
T Consensus 5 ~~~~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~R 74 (168)
T KOG3192|consen 5 GSPSRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLAR 74 (168)
T ss_pred chHHHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHHH
Confidence 3456899999999888788888888999999999999954322 125888899999999999999764
No 71
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=94.73 E-value=0.015 Score=50.52 Aligned_cols=62 Identities=31% Similarity=0.388 Sum_probs=49.8
Q ss_pred ccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHHHHHHHHHccCCCC
Q 024259 207 SDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSS---KAVAEEKFKLCSAAYQSLCDKLA 268 (270)
Q Consensus 207 d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~---k~~AeekFk~I~eAYevLsDp~k 268 (270)
+++.++|+++.+....+.++..|+.+.+.+|||+....+ +..+-+.+..++.||.+|.||.+
T Consensus 2 ~~~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l~ 66 (174)
T COG1076 2 DGFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPLL 66 (174)
T ss_pred CcccccccHHHHHHHHhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 355667777777667888999999999999999987544 23366789999999999998853
No 72
>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []. In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.
Probab=85.33 E-value=2 Score=36.27 Aligned_cols=39 Identities=15% Similarity=0.170 Sum_probs=28.4
Q ss_pred CCCccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCC
Q 024259 202 ESDMASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQ 242 (270)
Q Consensus 202 ~~~~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~ 242 (270)
.+.+.....||||++.. +.++|.+.|..|-...+|++..
T Consensus 54 ~Mtl~EA~~ILnv~~~~--~~eeI~k~y~~Lf~~Nd~~kGG 92 (127)
T PF03656_consen 54 GMTLDEARQILNVKEEL--SREEIQKRYKHLFKANDPSKGG 92 (127)
T ss_dssp ---HHHHHHHHT--G----SHHHHHHHHHHHHHHT-CCCTS
T ss_pred CCCHHHHHHHcCCCCcc--CHHHHHHHHHHHHhccCCCcCC
Confidence 46667889999999977 9999999999999999999754
No 73
>PF13446 RPT: A repeated domain in UCH-protein
Probab=83.02 E-value=2.7 Score=30.34 Aligned_cols=30 Identities=13% Similarity=0.109 Sum_probs=26.4
Q ss_pred CCccccchhcCcCCCCCCCHHHHHHHHHHHHH
Q 024259 203 SDMASDRQTLGLCASGPLKLEDVKLAYRVCAL 234 (270)
Q Consensus 203 ~~~~d~YeVLGL~~~a~lt~~eIKkAYRkLAl 234 (270)
++....|++|||+++. +.+.|-.+|.....
T Consensus 2 ~~~~~Ay~~Lgi~~~~--~Dd~Ii~~f~~~~~ 31 (62)
T PF13446_consen 2 MDVEEAYEILGIDEDT--DDDFIISAFQSKVN 31 (62)
T ss_pred CCHHHHHHHhCcCCCC--CHHHHHHHHHHHHH
Confidence 3456789999999998 99999999998887
No 74
>PF14687 DUF4460: Domain of unknown function (DUF4460)
Probab=72.21 E-value=9.3 Score=31.46 Aligned_cols=47 Identities=30% Similarity=0.329 Sum_probs=36.8
Q ss_pred CHHHHHHHHHHHHHHhCCCCCCCC--ChHHHHHHHHHHHHHHHHccCCC
Q 024259 221 KLEDVKLAYRVCALKWHPDRHQGS--SKAVAEEKFKLCSAAYQSLCDKL 267 (270)
Q Consensus 221 t~~eIKkAYRkLAlk~HPDK~~~~--~k~~AeekFk~I~eAYevLsDp~ 267 (270)
+..+++.|.|..-++.|||..... .+..-++-++.|+.-.+.|..+.
T Consensus 7 ~~~~l~~aLr~Fy~~VHPDlF~~~P~~k~~Ne~SLk~Ln~~Ld~l~~~~ 55 (112)
T PF14687_consen 7 SSPDLRSALRPFYFAVHPDLFGQHPEEKQVNEESLKLLNSYLDSLKKRK 55 (112)
T ss_pred hhHHHHHHHHHHHHHhCCcccccChHHHHhhHHHHHHHHHHHHHHhccC
Confidence 678899999999999999976543 24456677888888888877643
No 75
>COG2879 Uncharacterized small protein [Function unknown]
Probab=35.88 E-value=49 Score=25.08 Aligned_cols=28 Identities=36% Similarity=0.450 Sum_probs=22.1
Q ss_pred HHHHHHHHhCCCCCCCCChHHHHHHHHHHHHH
Q 024259 228 AYRVCALKWHPDRHQGSSKAVAEEKFKLCSAA 259 (270)
Q Consensus 228 AYRkLAlk~HPDK~~~~~k~~AeekFk~I~eA 259 (270)
-|-+-.++.|||+.+- .-+|.|+++.+|
T Consensus 27 nYVehmr~~hPd~p~m----T~~EFfrec~da 54 (65)
T COG2879 27 NYVEHMRKKHPDKPPM----TYEEFFRECQDA 54 (65)
T ss_pred HHHHHHHHhCcCCCcc----cHHHHHHHHHHh
Confidence 4667788999999874 478888888876
No 76
>PF07709 SRR: Seven Residue Repeat; InterPro: IPR011714 This repeat is found in some Plasmodium and Theileria proteins.
Probab=25.09 E-value=44 Score=17.73 Aligned_cols=13 Identities=38% Similarity=0.649 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHcc
Q 024259 252 KFKLCSAAYQSLC 264 (270)
Q Consensus 252 kFk~I~eAYevLs 264 (270)
.|..+..||+.|.
T Consensus 2 ~~~~V~~aY~~l~ 14 (14)
T PF07709_consen 2 KFEKVKNAYEQLS 14 (14)
T ss_pred cHHHHHHHHHhcC
Confidence 4777888888773
No 77
>PF12434 Malate_DH: Malate dehydrogenase enzyme
Probab=21.88 E-value=94 Score=19.91 Aligned_cols=17 Identities=35% Similarity=0.550 Sum_probs=14.6
Q ss_pred CHHHHHHHHHHHHHHhC
Q 024259 221 KLEDVKLAYRVCALKWH 237 (270)
Q Consensus 221 t~~eIKkAYRkLAlk~H 237 (270)
..++.+.+-|+.|+.||
T Consensus 9 ~~~~~r~~lR~AALeYH 25 (28)
T PF12434_consen 9 NKEDKRAQLRQAALEYH 25 (28)
T ss_pred chHHHHHHHHHHHHHhc
Confidence 34778899999999999
No 78
>PHA03308 transcriptional regulator ICP4; Provisional
Probab=20.23 E-value=44 Score=36.38 Aligned_cols=16 Identities=50% Similarity=0.692 Sum_probs=12.8
Q ss_pred cchhhhhcccchhhhh
Q 024259 17 INLRAALFHSTPVLER 32 (270)
Q Consensus 17 ~~~~~a~fHSTp~~~~ 32 (270)
+.+.-|+||||||+.-
T Consensus 877 s~i~~alfhstpvspt 892 (1463)
T PHA03308 877 SEIGEALFHSTPVSPT 892 (1463)
T ss_pred HHHHHhhhccCCCCcc
Confidence 4568899999999753
Done!