Query 024259
Match_columns 270
No_of_seqs 205 out of 1552
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 05:09:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024259.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024259hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ej7_A HCG3 gene; HCG3 protein 99.7 4.5E-17 1.5E-21 122.8 6.2 64 202-268 5-68 (82)
2 2dn9_A DNAJ homolog subfamily 99.7 5.5E-17 1.9E-21 121.5 5.4 63 202-268 3-65 (79)
3 2ctr_A DNAJ homolog subfamily 99.7 1E-16 3.5E-21 122.9 6.6 61 203-268 4-64 (88)
4 2ys8_A RAB-related GTP-binding 99.7 5E-17 1.7E-21 125.6 4.8 60 205-269 26-85 (90)
5 2dmx_A DNAJ homolog subfamily 99.7 7.2E-17 2.5E-21 124.4 5.3 63 203-268 6-68 (92)
6 2ctp_A DNAJ homolog subfamily 99.7 7.9E-17 2.7E-21 120.5 5.3 61 203-268 4-64 (78)
7 2yua_A Williams-beuren syndrom 99.7 8.9E-17 3.1E-21 125.9 5.7 63 202-268 13-75 (99)
8 1wjz_A 1700030A21RIK protein; 99.6 1.1E-16 3.7E-21 123.3 5.6 65 202-268 12-80 (94)
9 1hdj_A Human HSP40, HDJ-1; mol 99.6 1.3E-16 4.6E-21 119.0 5.0 58 206-268 3-60 (77)
10 1iur_A KIAA0730 protein; DNAJ 99.6 1.1E-16 3.8E-21 124.2 3.8 64 201-267 11-74 (88)
11 2lgw_A DNAJ homolog subfamily 99.6 2.8E-16 9.6E-21 123.7 5.9 61 205-268 1-61 (99)
12 2ctq_A DNAJ homolog subfamily 99.6 2.6E-16 8.9E-21 125.9 5.2 63 202-268 16-78 (112)
13 2cug_A Mkiaa0962 protein; DNAJ 99.6 2.7E-16 9.2E-21 120.6 5.0 60 204-268 15-74 (88)
14 2ctw_A DNAJ homolog subfamily 99.6 5.1E-16 1.7E-20 123.8 6.3 62 203-268 14-75 (109)
15 2och_A Hypothetical protein DN 99.6 4.3E-16 1.5E-20 115.3 4.8 58 204-268 6-63 (73)
16 1bq0_A DNAJ, HSP40; chaperone, 99.6 3.3E-16 1.1E-20 123.3 2.5 59 206-268 3-61 (103)
17 2o37_A Protein SIS1; HSP40, J- 99.6 1.3E-15 4.4E-20 117.9 4.6 57 205-268 7-63 (92)
18 2qwo_B Putative tyrosine-prote 99.6 9.8E-16 3.4E-20 120.2 3.5 58 206-265 33-91 (92)
19 2l6l_A DNAJ homolog subfamily 99.5 4.8E-15 1.6E-19 124.1 6.7 66 202-269 6-75 (155)
20 2qsa_A DNAJ homolog DNJ-2; J-d 99.5 2E-15 7E-20 119.7 3.7 65 203-268 12-77 (109)
21 3ag7_A Putative uncharacterize 99.5 1.3E-15 4.5E-20 121.8 2.4 60 206-268 41-105 (106)
22 3apq_A DNAJ homolog subfamily 99.5 3.4E-15 1.2E-19 127.3 4.1 59 206-268 2-60 (210)
23 1faf_A Large T antigen; J doma 99.5 2.2E-15 7.4E-20 114.2 2.2 56 205-268 10-67 (79)
24 3hho_A CO-chaperone protein HS 99.5 8.1E-15 2.8E-19 125.9 5.3 64 205-268 3-69 (174)
25 2guz_A Mitochondrial import in 99.5 7.5E-15 2.6E-19 108.9 3.9 58 203-268 11-69 (71)
26 1n4c_A Auxilin; four helix bun 99.5 9.6E-15 3.3E-19 127.3 4.4 62 206-269 117-179 (182)
27 1fpo_A HSC20, chaperone protei 99.5 1.4E-14 4.6E-19 124.3 4.6 62 207-268 2-66 (171)
28 1gh6_A Large T antigen; tumor 99.5 2.3E-15 7.9E-20 121.9 -0.5 59 205-269 7-65 (114)
29 3lz8_A Putative chaperone DNAJ 99.5 5.4E-15 1.8E-19 138.5 0.0 65 200-269 22-86 (329)
30 3bvo_A CO-chaperone protein HS 99.5 3E-14 1E-18 125.8 4.4 64 205-268 42-108 (207)
31 2pf4_E Small T antigen; PP2A, 99.3 1E-13 3.5E-18 120.0 -0.8 58 205-268 10-67 (174)
32 3uo3_A J-type CO-chaperone JAC 99.3 4.4E-13 1.5E-17 116.1 1.9 60 202-268 7-73 (181)
33 3apo_A DNAJ homolog subfamily 99.2 1.4E-12 4.9E-17 130.7 -1.1 62 203-268 18-79 (780)
34 2y4t_A DNAJ homolog subfamily 98.7 7.9E-09 2.7E-13 92.4 4.8 62 206-269 382-444 (450)
35 2guz_B Mitochondrial import in 98.5 5.4E-08 1.8E-12 71.7 3.8 52 205-264 3-57 (65)
36 2pzi_A Probable serine/threoni 82.2 0.8 2.8E-05 45.0 3.5 45 206-262 629-675 (681)
37 1q1s_A Large T antigen; import 29.2 12 0.0004 22.7 0.0 10 23-32 11-20 (26)
No 1
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.67 E-value=4.5e-17 Score=122.78 Aligned_cols=64 Identities=38% Similarity=0.560 Sum_probs=57.8
Q ss_pred CCCccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCC
Q 024259 202 ESDMASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLA 268 (270)
Q Consensus 202 ~~~~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k 268 (270)
.....++|+||||++++ +.++||+||++|+++||||+++.. .+.++++|++|++||++|+||.+
T Consensus 5 ~~~~~~~y~iLgv~~~a--s~~eIk~ayr~l~~~~HPDk~~~~-~~~a~~~f~~i~~Ay~~L~d~~~ 68 (82)
T 2ej7_A 5 SSGMVDYYEVLDVPRQA--SSEAIKKAYRKLALKWHPDKNPEN-KEEAERRFKQVAEAYEVLSDAKK 68 (82)
T ss_dssp CSSSCCHHHHTTCCTTC--CHHHHHHHHHHHHTTSCTTTCSTT-HHHHHHHHHHHHHHHHHHSSTTH
T ss_pred CCCCcCHHHHcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCCc-HHHHHHHHHHHHHHHHHHCCHHH
Confidence 34567999999999999 999999999999999999998764 35789999999999999999975
No 2
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.66 E-value=5.5e-17 Score=121.51 Aligned_cols=63 Identities=30% Similarity=0.454 Sum_probs=56.7
Q ss_pred CCCccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCC
Q 024259 202 ESDMASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLA 268 (270)
Q Consensus 202 ~~~~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k 268 (270)
.....++|+||||++++ +.++||+|||+|+++||||++++. +.++++|++|++||++|+||.+
T Consensus 3 ~~~~~~~y~iLgv~~~a--~~~~Ik~ayr~l~~~~HPD~~~~~--~~a~~~f~~i~~Ay~~L~d~~~ 65 (79)
T 2dn9_A 3 SGSSGDYYQILGVPRNA--SQKEIKKAYYQLAKKYHPDTNKDD--PKAKEKFSQLAEAYEVLSDEVK 65 (79)
T ss_dssp SSCCSCHHHHHTCCTTC--CHHHHHHHHHHHHHHTCTTTCSSC--TTHHHHHHHHHHHHHHHHSHHH
T ss_pred CCCCCCHHHHcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCCC--HHHHHHHHHHHHHHHHHCCHHH
Confidence 34457899999999999 999999999999999999999864 4689999999999999999864
No 3
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.66 E-value=1e-16 Score=122.93 Aligned_cols=61 Identities=31% Similarity=0.468 Sum_probs=56.4
Q ss_pred CCccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCC
Q 024259 203 SDMASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLA 268 (270)
Q Consensus 203 ~~~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k 268 (270)
....++|+||||++++ +.++||+|||+|+++||||+++. +.++++|++|++||++|+||.+
T Consensus 4 ~~~~~~y~iLgv~~~a--s~~eIk~ayr~l~~~~HPDk~~~---~~a~~~f~~i~~Ay~~L~d~~~ 64 (88)
T 2ctr_A 4 GSSGSYYDILGVPKSA--SERQIKKAFHKLAMKYHPDKNKS---PDAEAKFREIAEAYETLSDANR 64 (88)
T ss_dssp CCCCSHHHHHTCCTTC--CHHHHHHHHHHHHHHTCTTTCCS---HHHHHHHHHHHHHHHHHHSSHH
T ss_pred CCCCCHHHHcCcCCCC--CHHHHHHHHHHHHHHHCcCCCCC---hHHHHHHHHHHHHHHHHCCHHH
Confidence 4457899999999999 99999999999999999999985 6799999999999999999964
No 4
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.66 E-value=5e-17 Score=125.64 Aligned_cols=60 Identities=25% Similarity=0.360 Sum_probs=55.5
Q ss_pred ccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCCC
Q 024259 205 MASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 205 ~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
..++|+||||++++ +.++||+|||+|+++||||+++. +.++++|++|++||++|+||.+.
T Consensus 26 ~~~~y~iLgv~~~a--s~~eIk~aYr~la~~~HPDk~~~---~~~~~~f~~i~~Ay~~L~d~~~R 85 (90)
T 2ys8_A 26 SKDSWDMLGVKPGA--SRDEVNKAYRKLAVLLHPDKCVA---PGSEDAFKAVVNARTALLKNIKS 85 (90)
T ss_dssp CSSHHHHHTCCTTC--CHHHHHHHHHHHHHHHCTTTCCC---TTHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCHHHHcCcCCCC--CHHHHHHHHHHHHHHHCcCCCCC---ccHHHHHHHHHHHHHHHCCcccc
Confidence 47899999999999 99999999999999999999986 45889999999999999999764
No 5
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.65 E-value=7.2e-17 Score=124.40 Aligned_cols=63 Identities=48% Similarity=0.702 Sum_probs=57.4
Q ss_pred CCccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCC
Q 024259 203 SDMASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLA 268 (270)
Q Consensus 203 ~~~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k 268 (270)
....++|+||||++++ +.++||+|||+|+++||||+++... +.++++|++|++||++|+||.+
T Consensus 6 ~~~~~~y~iLgv~~~a--s~~eIk~ayr~l~~~~HPDk~~~~~-~~a~~~f~~i~~Ay~~L~d~~~ 68 (92)
T 2dmx_A 6 SGMANYYEVLGVQASA--SPEDIKKAYRKLALRWHPDKNPDNK-EEAEKKFKLVSEAYEVLSDSKK 68 (92)
T ss_dssp CCCCCHHHHHTCCTTC--CTTHHHHHHHHHHHHTCTTTCSSCS-HHHHHHHHHHHHHHHHHHSHHH
T ss_pred CCCcCHHHHcCCCCCC--CHHHHHHHHHHHHHHHCCCCCCccH-HHHHHHHHHHHHHHHHHCCHHH
Confidence 4567999999999999 9999999999999999999988653 6799999999999999999864
No 6
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.65 E-value=7.9e-17 Score=120.54 Aligned_cols=61 Identities=34% Similarity=0.485 Sum_probs=56.3
Q ss_pred CCccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCC
Q 024259 203 SDMASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLA 268 (270)
Q Consensus 203 ~~~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k 268 (270)
....++|+||||++++ +.++||+||++|+++||||+++. +.+.++|++|++||++|+||.+
T Consensus 4 ~~~~~~y~iLgv~~~a--s~~eIk~ayr~l~~~~HPDk~~~---~~~~~~f~~i~~Ay~~L~d~~~ 64 (78)
T 2ctp_A 4 GSSGDYYEILGVSRGA--SDEDLKKAYRRLALKFHPDKNHA---PGATEAFKAIGTAYAVLSNPEK 64 (78)
T ss_dssp SCSCCHHHHHTCCTTC--CHHHHHHHHHHHHTTSCTTTCSS---HHHHHHHHHHHHHHHHHTSHHH
T ss_pred CCCCCHHHHcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCC---ccHHHHHHHHHHHHHHHCCHHH
Confidence 4457999999999999 99999999999999999999976 6789999999999999999864
No 7
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.65 E-value=8.9e-17 Score=125.91 Aligned_cols=63 Identities=30% Similarity=0.390 Sum_probs=57.4
Q ss_pred CCCccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCC
Q 024259 202 ESDMASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLA 268 (270)
Q Consensus 202 ~~~~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k 268 (270)
.....++|+||||++++ +.++||+|||+|+++||||++++. +.++++|++|++||++|+||.+
T Consensus 13 ~~~~~~~Y~vLgv~~~a--s~~eIk~ayr~l~~~~HPDk~~~~--~~a~~~f~~i~~Ay~~L~d~~~ 75 (99)
T 2yua_A 13 SYSRTALYDLLGVPSTA--TQAQIKAAYYRQCFLYHPDRNSGS--AEAAERFTRISQAYVVLGSATL 75 (99)
T ss_dssp SSCSSHHHHHHTCCTTC--CHHHHHHHHHHHHHHSCTTTCSSC--SHHHHHHHHHHHHHHHTTSHHH
T ss_pred CCCccCHHHHcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCCC--HHHHHHHHHHHHHHHHHCCHHH
Confidence 45567999999999999 999999999999999999999764 5689999999999999999964
No 8
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.65 E-value=1.1e-16 Score=123.33 Aligned_cols=65 Identities=22% Similarity=0.300 Sum_probs=57.9
Q ss_pred CCCccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC----ChHHHHHHHHHHHHHHHHccCCCC
Q 024259 202 ESDMASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGS----SKAVAEEKFKLCSAAYQSLCDKLA 268 (270)
Q Consensus 202 ~~~~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~----~k~~AeekFk~I~eAYevLsDp~k 268 (270)
.....++|+||||++++ +.++||+|||+|+++||||+++.. ..+.++++|++|++||++|+||.+
T Consensus 12 ~~~~~~~y~iLgv~~~a--s~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~ 80 (94)
T 1wjz_A 12 QTLKKDWYSILGADPSA--NMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEET 80 (94)
T ss_dssp SSSCSCHHHHTTCCTTC--CHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSH
T ss_pred cCCCCChHHHcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHH
Confidence 35567999999999999 999999999999999999998742 135689999999999999999975
No 9
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.64 E-value=1.3e-16 Score=119.02 Aligned_cols=58 Identities=43% Similarity=0.587 Sum_probs=53.9
Q ss_pred cccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCC
Q 024259 206 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLA 268 (270)
Q Consensus 206 ~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k 268 (270)
.++|+||||++++ +.++||+||++|+++||||+++. +.+++.|+.|++||++|+||.+
T Consensus 3 ~~~y~iLgv~~~a--s~~~Ik~ayr~l~~~~HPD~~~~---~~~~~~f~~i~~Ay~~L~d~~~ 60 (77)
T 1hdj_A 3 KDYYQTLGLARGA--SDEEIKRAYRRQALRYHPDKNKE---PGAEEKFKEIAEAYDVLSDPRK 60 (77)
T ss_dssp CCSHHHHTCCTTC--CHHHHHHHHHHHHHTTCTTTCCC---TTHHHHHHHHHHHHHHTTCHHH
T ss_pred CCHHHHcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCC---ccHHHHHHHHHHHHHHHCCHHH
Confidence 5899999999999 99999999999999999999886 3588999999999999999864
No 10
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.63 E-value=1.1e-16 Score=124.18 Aligned_cols=64 Identities=22% Similarity=0.235 Sum_probs=57.3
Q ss_pred CCCCccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCC
Q 024259 201 SESDMASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKL 267 (270)
Q Consensus 201 ~~~~~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~ 267 (270)
......++|+||||++++ +.++||+|||+|+++||||+++++. +.++++|++|++||++|+|..
T Consensus 11 ~~~~~~~~y~vLgv~~~a--s~~eIKkaYrkla~~~HPDk~~~~~-~~a~~~F~~I~~AYevL~~~~ 74 (88)
T 1iur_A 11 RGSILKEVTSVVEQAWKL--PESERKKIIRRLYLKWHPDKNPENH-DIANEVFKHLQNEINRLEKQA 74 (88)
T ss_dssp SSSCHHHHHHHHHHTTSS--CSHHHHHHHHHHHHHTCTTTSSSCH-HHHHHHHHHHHHHHHHHHHHT
T ss_pred CCccHHHHHHHhCCCCCC--CHHHHHHHHHHHHHHHCCCCCCCch-HHHHHHHHHHHHHHHHHHhhc
Confidence 345567899999999999 9999999999999999999988753 568999999999999999854
No 11
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.62 E-value=2.8e-16 Score=123.75 Aligned_cols=61 Identities=43% Similarity=0.633 Sum_probs=55.9
Q ss_pred ccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCC
Q 024259 205 MASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLA 268 (270)
Q Consensus 205 ~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k 268 (270)
+.++|+||||++++ +.++||+|||+|+++||||+++... +.++++|++|++||++|+||.+
T Consensus 1 M~d~Y~iLgv~~~a--s~~eIk~aYr~la~~~HPDk~~~~~-~~a~~~f~~I~~AY~vL~d~~~ 61 (99)
T 2lgw_A 1 MASYYEILDVPRSA--SADDIKKAYRRKALQWHPDKNPDNK-EFAEKKFKEVAEAYEVLSDKHK 61 (99)
T ss_dssp CCCHHHHSSSCTTS--CHHHHHHHHHHHHHHTSTTTCCSCC-HHHHHHHHHHHHHHHHHHSHHH
T ss_pred CCCHHHHcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCccH-HHHHHHHHHHHHHHHHHCCHHH
Confidence 36899999999999 9999999999999999999988653 6799999999999999999864
No 12
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.62 E-value=2.6e-16 Score=125.92 Aligned_cols=63 Identities=25% Similarity=0.345 Sum_probs=57.3
Q ss_pred CCCccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCC
Q 024259 202 ESDMASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLA 268 (270)
Q Consensus 202 ~~~~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k 268 (270)
.....++|+||||++++ +.++||+|||+|+++||||++++. +.++++|++|++||++|+||.+
T Consensus 16 ~~~~~d~Y~iLgv~~~a--s~~eIk~ayr~l~~~~HPDk~~~~--~~a~~~f~~i~~Ay~vL~d~~~ 78 (112)
T 2ctq_A 16 SEDTEDYYTLLGCDELS--SVEQILAEFKVRALECHPDKHPEN--PKAVETFQKLQKAKEILTNEES 78 (112)
T ss_dssp CCCCCCHHHHTTCCTTS--CHHHHHHHHHHHHHTTCTTTCTTC--STHHHHHHHHHHHHHHHHSHHH
T ss_pred ccCCCCHHHHcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCCc--HHHHHHHHHHHHHHHHHCCHHH
Confidence 34568999999999999 999999999999999999999864 4689999999999999999975
No 13
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.62 E-value=2.7e-16 Score=120.60 Aligned_cols=60 Identities=30% Similarity=0.486 Sum_probs=55.3
Q ss_pred CccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCC
Q 024259 204 DMASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLA 268 (270)
Q Consensus 204 ~~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k 268 (270)
...++|+||||++++ +.++||+|||+|+++||||+++. +.++++|++|++||++|+||.+
T Consensus 15 ~~~d~y~iLgv~~~a--s~~eIk~ayr~l~~~~HPDk~~~---~~~~~~f~~i~~Ay~~L~d~~~ 74 (88)
T 2cug_A 15 LDFDPYRVLGVSRTA--SQADIKKAYKKLAREWHPDKNKD---PGAEDRFIQISKAYEILSNEEK 74 (88)
T ss_dssp SSSCHHHHHTCCTTC--CHHHHHHHHHHHHHHSCTTTCCS---TTHHHHHHHHHHHHHHHHSHHH
T ss_pred CCCCHHHHcCcCCCC--CHHHHHHHHHHHHHHHCcCCCCC---hhHHHHHHHHHHHHHHHCCHHH
Confidence 346899999999999 99999999999999999999986 4589999999999999999864
No 14
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.61 E-value=5.1e-16 Score=123.81 Aligned_cols=62 Identities=34% Similarity=0.448 Sum_probs=56.6
Q ss_pred CCccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCC
Q 024259 203 SDMASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLA 268 (270)
Q Consensus 203 ~~~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k 268 (270)
....++|+||||++++ +.++||+|||+|+++||||++++. +.++++|++|++||++|+||.+
T Consensus 14 ~~~~~~Y~vLgv~~~a--s~~eIk~aYr~la~~~HPDk~~~~--~~a~~~f~~i~~Ay~vL~d~~~ 75 (109)
T 2ctw_A 14 TSGESLYHVLGLDKNA--TSDDIKKSYRKLALKYHPDKNPDN--PEAADKFKEINNAHAILTDATK 75 (109)
T ss_dssp SCSCCHHHHHTCCTTC--CHHHHHHHHHHHHHHSCTTTSTTC--HHHHHHHHHHHHHHHHHTCHHH
T ss_pred CCCCCHHHHcCcCCCC--CHHHHHHHHHHHHHHHCcCCCCCc--HHHHHHHHHHHHHHHHHcCHHH
Confidence 3446899999999999 999999999999999999999864 5789999999999999999865
No 15
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.60 E-value=4.3e-16 Score=115.31 Aligned_cols=58 Identities=34% Similarity=0.520 Sum_probs=52.9
Q ss_pred CccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCC
Q 024259 204 DMASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLA 268 (270)
Q Consensus 204 ~~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k 268 (270)
...++|+||||++++ +.++||+||++|+++||||++++. .++|++|++||++|+||.+
T Consensus 6 ~~~~~y~iLgl~~~a--~~~eIk~ayr~l~~~~HPD~~~~~-----~~~f~~i~~Ay~~L~d~~~ 63 (73)
T 2och_A 6 KETGYYDVLGVKPDA--SDNELKKAYRKMALKFHPDKNPDG-----AEQFKQISQAYEVLSDEKK 63 (73)
T ss_dssp CCCCHHHHHTCCTTC--CHHHHHHHHHHHHHHTCTTTCTTC-----HHHHHHHHHHHHHHTSHHH
T ss_pred CCCCHHHHcCCCCCC--CHHHHHHHHHHHHHHHCcCCCcCH-----HHHHHHHHHHHHHHCCHHH
Confidence 346899999999999 999999999999999999998763 5789999999999999864
No 16
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.58 E-value=3.3e-16 Score=123.31 Aligned_cols=59 Identities=36% Similarity=0.580 Sum_probs=54.5
Q ss_pred cccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCC
Q 024259 206 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLA 268 (270)
Q Consensus 206 ~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k 268 (270)
.++|+||||++++ +.++||+|||+|+++||||++++. +.++++|++|++||++|+||.+
T Consensus 3 ~~~y~iLgv~~~a--s~~eIk~ayr~l~~~~HPDk~~~~--~~a~~~f~~i~~Ay~~L~d~~~ 61 (103)
T 1bq0_A 3 QDYYEILGVSKTA--EEREIRKAYKRLAMKYHPDRNQGD--KEAEAKFKEIKEAYEVLTDSQK 61 (103)
T ss_dssp CCSTTTTSSCSSC--CHHHHHHHHHHHHTTTCTTTCTTT--CTHHHHHHHHTTTTTSTTCSHH
T ss_pred CCHHHHcCcCCCC--CHHHHHHHHHHHHHHHCcCCCCCc--HHHHHHHHHHHHHHHHHCCHHH
Confidence 5899999999999 999999999999999999999864 4588999999999999999964
No 17
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.57 E-value=1.3e-15 Score=117.86 Aligned_cols=57 Identities=37% Similarity=0.543 Sum_probs=52.4
Q ss_pred ccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCC
Q 024259 205 MASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLA 268 (270)
Q Consensus 205 ~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k 268 (270)
..++|+||||++++ +.++||+||++|+++||||++++. .++|++|++||++|+||.+
T Consensus 7 ~~~~y~iLgv~~~a--s~~eIk~ayr~l~~~~HPDk~~~~-----~~~f~~i~~Ay~~L~d~~~ 63 (92)
T 2o37_A 7 ETKLYDLLGVSPSA--NEQELKKGYRKAALKYHPDKPTGD-----TEKFKEISEAFEILNDPQK 63 (92)
T ss_dssp CCHHHHHHTCCTTC--CHHHHHHHHHHHHHHHCTTSTTCC-----HHHHHHHHHHHHHHTSHHH
T ss_pred CCCHHHHcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCCh-----HHHHHHHHHHHHHHCCHHH
Confidence 46899999999999 999999999999999999999763 4699999999999999865
No 18
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.56 E-value=9.8e-16 Score=120.23 Aligned_cols=58 Identities=22% Similarity=0.317 Sum_probs=52.6
Q ss_pred cccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHHHHHHHHccC
Q 024259 206 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSS-KAVAEEKFKLCSAAYQSLCD 265 (270)
Q Consensus 206 ~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~-k~~AeekFk~I~eAYevLsD 265 (270)
.++|++|||++.+ +.++||+|||++|++||||++++.. ...|+++|++|++||+||.+
T Consensus 33 ~~~y~~Lgv~~~a--s~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLV--TPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSS--SHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCC--CHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 4789999999999 9999999999999999999998754 23589999999999999975
No 19
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.55 E-value=4.8e-15 Score=124.10 Aligned_cols=66 Identities=21% Similarity=0.271 Sum_probs=58.1
Q ss_pred CCCccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCC----hHHHHHHHHHHHHHHHHccCCCCC
Q 024259 202 ESDMASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSS----KAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 202 ~~~~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~----k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
.....++|+||||++++ +.++||+|||+|++++|||+++... ++.+.++|++|++||++|+||.+.
T Consensus 6 ~~~~~~~y~iLgv~~~a--~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R 75 (155)
T 2l6l_A 6 QMPKKDWYSILGADPSA--NISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETK 75 (155)
T ss_dssp CCCCSHHHHHHTCCTTC--CHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHH
T ss_pred cCCCCChhHhcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 34567999999999999 9999999999999999999988653 345889999999999999999753
No 20
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.54 E-value=2e-15 Score=119.74 Aligned_cols=65 Identities=31% Similarity=0.466 Sum_probs=57.4
Q ss_pred CCccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-CChHHHHHHHHHHHHHHHHccCCCC
Q 024259 203 SDMASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQG-SSKAVAEEKFKLCSAAYQSLCDKLA 268 (270)
Q Consensus 203 ~~~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~-~~k~~AeekFk~I~eAYevLsDp~k 268 (270)
....++|+||||++++ ++.++||+|||+|+++||||++++ ...+.++++|++|++||++|+||.+
T Consensus 12 ~~~~~~y~iLgv~~~a-~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~ 77 (109)
T 2qsa_A 12 CGLENCYDVLEVNREE-FDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEA 77 (109)
T ss_dssp TTTSCHHHHTTCCGGG-CCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHH
T ss_pred cCCCCHHHHcCCCCCC-CCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHH
Confidence 3457999999999985 699999999999999999999885 3346799999999999999999965
No 21
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.54 E-value=1.3e-15 Score=121.80 Aligned_cols=60 Identities=23% Similarity=0.230 Sum_probs=53.0
Q ss_pred cccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--CC---hHHHHHHHHHHHHHHHHccCCCC
Q 024259 206 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQG--SS---KAVAEEKFKLCSAAYQSLCDKLA 268 (270)
Q Consensus 206 ~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~--~~---k~~AeekFk~I~eAYevLsDp~k 268 (270)
.+||+|||++. + +.++||+|||+++++|||||+++ .. +..|+++|++|++||++|+|+..
T Consensus 41 ~d~Y~vl~~~~-A--s~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~~ 105 (106)
T 3ag7_A 41 SGWKPVPLMDM-I--EGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLGP 105 (106)
T ss_dssp SCCCCCCGGGS-C--SHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred CCHHHHcCCCC-C--CHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCccc
Confidence 68999999996 8 99999999999999999999863 11 33589999999999999999975
No 22
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.53 E-value=3.4e-15 Score=127.33 Aligned_cols=59 Identities=25% Similarity=0.381 Sum_probs=54.8
Q ss_pred cccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCC
Q 024259 206 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLA 268 (270)
Q Consensus 206 ~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k 268 (270)
.++|+||||++++ +.++||+|||+|+++||||++++. +.++++|++|++||++|+||.+
T Consensus 2 ~~~y~~l~~~~~a--~~~~ik~ay~~l~~~~HPD~~~~~--~~~~~~f~~i~~Ay~~L~~~~~ 60 (210)
T 3apq_A 2 QNFYSLLGVSKTA--SSREIRQAFKKLALKLHPDKNPNN--PNAHGDFLKINRAYEVLKDEDL 60 (210)
T ss_dssp CCHHHHHTCCTTC--CHHHHHHHHHHHHHHHCGGGCTTC--TTHHHHHHHHHHHHHHHTSHHH
T ss_pred CCHHHHcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCCC--hHHHHHHHHHHHHHHHhCCHHH
Confidence 5899999999999 999999999999999999999765 4689999999999999999865
No 23
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.52 E-value=2.2e-15 Score=114.20 Aligned_cols=56 Identities=16% Similarity=0.230 Sum_probs=50.5
Q ss_pred ccccchhcCcCCC--CCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCC
Q 024259 205 MASDRQTLGLCAS--GPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLA 268 (270)
Q Consensus 205 ~~d~YeVLGL~~~--a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k 268 (270)
..++|+||||+++ + +.++||+|||+|+++||||+++. .++|++|++||++|+|+.+
T Consensus 10 ~~~~y~iLgl~~~~~a--~~~eIk~aYr~la~~~HPDk~~~------~~~f~~i~~AYe~L~~~~~ 67 (79)
T 1faf_A 10 KERLLELLKLPRQLWG--DFGRMQQAYKQQSLLLHPDKGGS------HALMQELNSLWGTFKTEVY 67 (79)
T ss_dssp HHHHHHHHTCCSSSTT--CHHHHHHHHHHHHHHSSGGGSCC------HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCC--CHHHHHHHHHHHHHHHCcCCCCC------HHHHHHHHHHHHHHhhHHH
Confidence 4679999999999 8 99999999999999999999753 5789999999999998753
No 24
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.51 E-value=8.1e-15 Score=125.94 Aligned_cols=64 Identities=23% Similarity=0.267 Sum_probs=56.2
Q ss_pred ccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHHHHHHHHHccCCCC
Q 024259 205 MASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSS---KAVAEEKFKLCSAAYQSLCDKLA 268 (270)
Q Consensus 205 ~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~---k~~AeekFk~I~eAYevLsDp~k 268 (270)
..+||+||||++++.++..+||+|||+|+++||||++++.. +..+.++|+.|++||++|+||.+
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~ 69 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLR 69 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHH
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHH
Confidence 46899999999999556999999999999999999998754 23388999999999999999965
No 25
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.50 E-value=7.5e-15 Score=108.91 Aligned_cols=58 Identities=19% Similarity=0.065 Sum_probs=51.1
Q ss_pred CCccccchhcCcCC-CCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCC
Q 024259 203 SDMASDRQTLGLCA-SGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLA 268 (270)
Q Consensus 203 ~~~~d~YeVLGL~~-~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k 268 (270)
+...++|+||||++ ++ +.++||+|||+|+++||||+.. ..++|++|++||++|+|+..
T Consensus 11 m~~~~~y~iLgl~~~~a--~~~eIk~ayr~l~~~~HPDk~g------~~~~f~~i~~Aye~L~~~~~ 69 (71)
T 2guz_A 11 MNSKEALQILNLTENTL--TKKKLKEVHRKIMLANHPDKGG------SPFLATKINEAKDFLEKRGI 69 (71)
T ss_dssp CCHHHHHHHTTCCTTTC--CHHHHHHHHHHHHHHHCGGGTC------CHHHHHHHHHHHHHHHHHCC
T ss_pred CCHHHHHHHcCCCCCCC--CHHHHHHHHHHHHHHHCCCCCC------CHHHHHHHHHHHHHHhhhhh
Confidence 45578999999998 78 9999999999999999999953 24589999999999998754
No 26
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.49 E-value=9.6e-15 Score=127.28 Aligned_cols=62 Identities=23% Similarity=0.296 Sum_probs=56.2
Q ss_pred cccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHHHHHHHccCCCCC
Q 024259 206 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSK-AVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 206 ~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k-~~AeekFk~I~eAYevLsDp~k~ 269 (270)
.++|+||||++++ +.++||+|||+|+++||||++++... ..|+++|++|++||++|+||.+.
T Consensus 117 ~d~Y~vLgv~~~A--s~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR 179 (182)
T 1n4c_A 117 ETKWKPVGMADLV--TPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQK 179 (182)
T ss_dssp CCCCCCCCGGGGS--SHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred cchhhcCCCCCCC--CHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhh
Confidence 5899999999999 99999999999999999999986542 24899999999999999999764
No 27
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.48 E-value=1.4e-14 Score=124.33 Aligned_cols=62 Identities=23% Similarity=0.294 Sum_probs=56.2
Q ss_pred ccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHHHHHHHHHccCCCC
Q 024259 207 SDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSS---KAVAEEKFKLCSAAYQSLCDKLA 268 (270)
Q Consensus 207 d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~---k~~AeekFk~I~eAYevLsDp~k 268 (270)
+||+||||++++.++..+||++||+|+++||||++++.. +..|.++|+.|++||++|+||.+
T Consensus 2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~ 66 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLM 66 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHH
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchH
Confidence 699999999998889999999999999999999998754 33578899999999999999975
No 28
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.48 E-value=2.3e-15 Score=121.89 Aligned_cols=59 Identities=25% Similarity=0.273 Sum_probs=51.2
Q ss_pred ccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCCC
Q 024259 205 MASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 205 ~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
..++|+||||++++..+.++||+|||+|+++||||++++ +++|++|++||+||+||.+.
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~------~e~f~~I~~AYevL~d~~~R 65 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD------EEKMKKMNTLYKKMEDGVKY 65 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT------TTTTHHHHHHHHHHHHHHHS
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc------HHHHHHHHHHHHHHCCHHHH
Confidence 358999999999993333999999999999999999875 46899999999999999754
No 29
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.46 E-value=5.4e-15 Score=138.47 Aligned_cols=65 Identities=32% Similarity=0.422 Sum_probs=0.0
Q ss_pred cCCCCccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCCC
Q 024259 200 SSESDMASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 200 ~~~~~~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
+..+...+||+||||++++ +.++||+|||+||++||||++++ ..|+++|++|++||++|+||.+.
T Consensus 22 ~~~m~~~d~Y~vLgv~~~a--s~~eIk~aYr~la~~~HPDk~~~---~~a~~~f~~i~~Ay~vL~d~~~R 86 (329)
T 3lz8_A 22 SNAMELKDYYAILGVQPTD--DLKTIKTAYRRLARKYHPDVSKE---NDAEAKFKDLAEAWEVLKDEQRR 86 (329)
T ss_dssp ----------------------------------------------------------------------
T ss_pred cccccccCHHHHcCcCCCC--CHHHHHHHHHHHHHHHCCCCCCC---hHHHHHHHHHHHHHHHhhhhhhh
Confidence 4445678999999999999 99999999999999999999886 46899999999999999999764
No 30
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.45 E-value=3e-14 Score=125.82 Aligned_cols=64 Identities=20% Similarity=0.191 Sum_probs=56.1
Q ss_pred ccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHHHHHHHHHccCCCC
Q 024259 205 MASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSS---KAVAEEKFKLCSAAYQSLCDKLA 268 (270)
Q Consensus 205 ~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~---k~~AeekFk~I~eAYevLsDp~k 268 (270)
..+||+||||++++.++..+||++||+|+++||||++++.. +..+.++|+.|++||++|+||.+
T Consensus 42 ~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~ 108 (207)
T 3bvo_A 42 TRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLS 108 (207)
T ss_dssp TCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHH
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH
Confidence 46899999999875459999999999999999999998653 34578899999999999999975
No 31
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.32 E-value=1e-13 Score=120.03 Aligned_cols=58 Identities=26% Similarity=0.284 Sum_probs=48.6
Q ss_pred ccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCC
Q 024259 205 MASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLA 268 (270)
Q Consensus 205 ~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k 268 (270)
..++|+||||++++..+.++||+|||++|+++|||++++ +++|++|++||++|+||.+
T Consensus 10 ~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~------~e~F~~I~~AYevLsdp~k 67 (174)
T 2pf4_E 10 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD------EEKMKKMNTLYKKMEDGVK 67 (174)
T ss_dssp HHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C------CTTTTHHHHHHHHHHHHHH
T ss_pred cccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC------HHHHHHHHHHHHHhCCHHH
Confidence 368999999999993337999999999999999999765 3679999999999999864
No 32
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.30 E-value=4.4e-13 Score=116.11 Aligned_cols=60 Identities=22% Similarity=0.223 Sum_probs=52.6
Q ss_pred CCCccccchhc------CcCC-CCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCC
Q 024259 202 ESDMASDRQTL------GLCA-SGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLA 268 (270)
Q Consensus 202 ~~~~~d~YeVL------GL~~-~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k 268 (270)
.....+||+|| |+++ ++ +..+||+|||+|+++||||++++ +.++|+.|++||++|+||.+
T Consensus 7 ~~~~~d~y~ll~~~~p~~~~~~~a--~~~eIk~aYr~la~~~HPDk~~~-----a~~~f~~i~~AY~vL~dp~~ 73 (181)
T 3uo3_A 7 RRFTSTFYELFPKTFPKKLPIWTI--DQSRLRKEYRQLQAQHHPDMAQQ-----GSEQSSTLNQAYHTLKDPLR 73 (181)
T ss_dssp CCCSCCTGGGCTTTCTTCSCCSCC--CHHHHHHHHHHHHHTCCTTSCCS-----CSSGGGSHHHHHHHHHSHHH
T ss_pred CCCCCCHHHHhccccccCCCCCCC--CHHHHHHHHHHHHHHhCcCCCcc-----HHHHHHHHHHHHHHHcChHH
Confidence 34567999999 4665 67 99999999999999999999876 66789999999999999975
No 33
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.18 E-value=1.4e-12 Score=130.68 Aligned_cols=62 Identities=24% Similarity=0.348 Sum_probs=32.9
Q ss_pred CCccccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCCC
Q 024259 203 SDMASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLA 268 (270)
Q Consensus 203 ~~~~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLsDp~k 268 (270)
....+||+||||++++ +.++||+|||+|+++||||++++. +.++++|++|++||++|+||.+
T Consensus 18 ~~~~~~y~~lg~~~~a--~~~~i~~ay~~l~~~~hpd~~~~~--~~~~~~f~~i~~ay~~L~~~~~ 79 (780)
T 3apo_A 18 RHDQNFYSLLGVSKTA--SSREIRQAFKKLALKLHPDKNPNN--PNAHGDFLKINRAYEVLKDEDL 79 (780)
T ss_dssp -----CHHHHTCCTTC--CHHHHHHHHCC-------------------------CTHHHHHHSHHH
T ss_pred CCCCCHHHHcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCCC--hHHHHHHHHHHHHHHHHcChHH
Confidence 3447899999999999 999999999999999999998754 5689999999999999999965
No 34
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.72 E-value=7.9e-09 Score=92.39 Aligned_cols=62 Identities=35% Similarity=0.460 Sum_probs=56.0
Q ss_pred cccchhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHHHHHHHHccCCCCC
Q 024259 206 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSS-KAVAEEKFKLCSAAYQSLCDKLAV 269 (270)
Q Consensus 206 ~d~YeVLGL~~~a~lt~~eIKkAYRkLAlk~HPDK~~~~~-k~~AeekFk~I~eAYevLsDp~k~ 269 (270)
.++|.+||+...+ +.++|+++|+++++++|||+.+.+. ++.++++|+.|.+||++|+||++.
T Consensus 382 ~~~y~~lg~~~~~--~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r 444 (450)
T 2y4t_A 382 RDYYKILGVKRNA--KKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMR 444 (450)
T ss_dssp CCSGGGSCSSTTC--CTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC
T ss_pred hhHHHHhCCCccC--CHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHH
Confidence 3899999999999 9999999999999999999987642 456999999999999999999875
No 35
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.52 E-value=5.4e-08 Score=71.67 Aligned_cols=52 Identities=8% Similarity=-0.033 Sum_probs=43.8
Q ss_pred ccccchhcCcCCC---CCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHcc
Q 024259 205 MASDRQTLGLCAS---GPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLC 264 (270)
Q Consensus 205 ~~d~YeVLGL~~~---a~lt~~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYevLs 264 (270)
....|.||||+++ + +.++|+++||+|...+|||+.. .......|+.|+++|.
T Consensus 3 ~~EA~~ILgv~~~~~~a--~~~~Ik~~yr~Lm~~nhPDkGG------S~yl~~ki~~Ake~l~ 57 (65)
T 2guz_B 3 LDESCKILNIEESKGDL--NMDKINNRFNYLFEVNDKEKGG------SFYLQSKVYRAAERLK 57 (65)
T ss_dssp HHHHHHHTTCCGGGTCC--SHHHHHHHHHHHHHHTCGGGTC------CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCcCcC--CHHHHHHHHHHHHHHhCCCCCC------CHHHHHHHHHHHHHHH
Confidence 3467899999998 8 9999999999999999999954 3455678888888874
No 36
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=82.24 E-value=0.8 Score=45.05 Aligned_cols=45 Identities=20% Similarity=0.177 Sum_probs=35.3
Q ss_pred cccchhcCcCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHH
Q 024259 206 ASDRQTLGLCASGPLKL--EDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQS 262 (270)
Q Consensus 206 ~d~YeVLGL~~~a~lt~--~eIKkAYRkLAlk~HPDK~~~~~k~~AeekFk~I~eAYev 262 (270)
.++|.+||++.+. .. .+|++|||++|+...++ ++++..|..|+.|
T Consensus 629 ~~~~~~lG~~~~~--~~lr~~~~~ayr~la~~~~~~----------~~r~~lvd~a~~v 675 (681)
T 2pzi_A 629 ASTNHILGFPFTS--HGLRLGVEASLRSLARVAPTQ----------RHRYTLVDMANKV 675 (681)
T ss_dssp CSSSEETTEESSH--HHHHHHHHHHHHHHHHHCSSH----------HHHHHHHHHHHHH
T ss_pred CCCcccCCCCCCh--HHHHHHHHHHHHHHHHhCCCh----------HHHHHHHHHhccc
Confidence 3499999997665 44 66999999999966433 5689999999876
No 37
>1q1s_A Large T antigen; importin alpha/karyopherin alpha, nuclear localisation sequence (NLS) recognition, phosphorylation; 2.30A {Synthetic} PDB: 1q1t_A
Probab=29.22 E-value=12 Score=22.73 Aligned_cols=10 Identities=20% Similarity=0.385 Sum_probs=8.0
Q ss_pred hcccchhhhh
Q 024259 23 LFHSTPVLER 32 (270)
Q Consensus 23 ~fHSTp~~~~ 32 (270)
+|||||+-..
T Consensus 11 s~~sTPPKkK 20 (26)
T 1q1s_A 11 AQHAAPPKKK 20 (26)
T ss_pred ccccCCCccc
Confidence 8999998543
Done!