BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024267
(270 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255557727|ref|XP_002519893.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223540939|gb|EEF42497.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 264
Score = 340 bits (872), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 224/276 (81%), Positives = 234/276 (84%), Gaps = 18/276 (6%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGRFSRTIYVGNLPSDIRE+EVEDLFYKYGRILDIELKIPPRPPCYCFVEFEN RDAED
Sbjct: 1 MSGRFSRTIYVGNLPSDIREWEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENTRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGYNFDGCRLRVELAHGG RG SSSDRRGGYGG G GG+G G IS
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHGG--RGQSSSDRRGGYGGSGGGGSGSGGRYC------IS 112
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
RHSE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDS+GT+G+VDYTN EDMKYAIR
Sbjct: 113 RHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSDGTFGIVDYTNYEDMKYAIR 172
Query: 181 KLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRSRIVRRNRSKSLERSVSRSVS 240
KLDDTEFRNPWAR I VK Y+ SPSRSRSRSRSRSRS RNRSKSLERS SRSVS
Sbjct: 173 KLDDTEFRNPWARAYIRVKMYENSPSRSRSRSRSRSRSPR----RNRSKSLERSPSRSVS 228
Query: 241 RSMSASPVK------SSRARSRSRSVSPDKVRSGSG 270
+S SASPVK SR+RSRS S SP+K SGSG
Sbjct: 229 KSRSASPVKSSRAKSGSRSRSRSVSGSPNKAPSGSG 264
>gi|359490737|ref|XP_003634148.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 1 [Vitis
vinifera]
gi|359490739|ref|XP_003634149.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 2 [Vitis
vinifera]
gi|302143975|emb|CBI23080.3| unnamed protein product [Vitis vinifera]
Length = 250
Score = 337 bits (864), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 190/241 (78%), Positives = 202/241 (83%), Gaps = 16/241 (6%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGRFSRTIYVGNLPSDIREYE+EDLFYKYGRILD+ELKIPPRPPCYCFVEFEN+RDAED
Sbjct: 1 MSGRFSRTIYVGNLPSDIREYEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENSRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGYNFDGCRLRVELAHGG G+ SS G G GRFG+S
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHGGRGQSSSSD-------------RRGGHGSGGGGRFGVS 107
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRD++GT+G+VDYTN EDMKYAIR
Sbjct: 108 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDADGTFGLVDYTNHEDMKYAIR 167
Query: 181 KLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRSRIVRRNRSKSLERSVSRSVS 240
KLDDTEFRNPWAR I VKRYD RSRSRS S SRSR ++RNRSKSLERSVSRS S
Sbjct: 168 KLDDTEFRNPWARAYIRVKRYD---VSPRSRSRSHSPSRSRSLKRNRSKSLERSVSRSAS 224
Query: 241 R 241
+
Sbjct: 225 K 225
>gi|297816162|ref|XP_002875964.1| hypothetical protein ARALYDRAFT_906222 [Arabidopsis lyrata subsp.
lyrata]
gi|297321802|gb|EFH52223.1| hypothetical protein ARALYDRAFT_906222 [Arabidopsis lyrata subsp.
lyrata]
Length = 301
Score = 334 bits (856), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 201/269 (74%), Positives = 224/269 (83%), Gaps = 24/269 (8%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGRFSR+IYVGNLP DIRE+E+EDLFYKYGRI+DIELK+PPRPPCYCFVEFE++RDAED
Sbjct: 1 MSGRFSRSIYVGNLPGDIREHEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI+GRDGYNFDGCRLRVELAHGG RG SSSDRRGGYGGGG GG GG G G G+ RFG+S
Sbjct: 61 AIKGRDGYNFDGCRLRVELAHGG--RGQSSSDRRGGYGGGGGGGYGGGGGGGGSARFGVS 118
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
RHSE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEV+RDS+GTYGVVDYTN +DMKYAIR
Sbjct: 119 RHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIR 178
Query: 181 KLDDTEFRNPWARGRITVKRYD----------------------RSPSRSRSRSRSRSRS 218
KLDDTEFRNPWARG I VK+Y+ RS R RSRSRSRS S
Sbjct: 179 KLDDTEFRNPWARGFIRVKKYESSRSRSRSPSRSRSRSRSRSRSRSRGRGRSRSRSRSLS 238
Query: 219 RSRIVRRNRSKSLERSVSRSVSRSMSASP 247
RS+ R++ SKS +RS+SRS+S+S S SP
Sbjct: 239 RSKSPRKDLSKSPKRSLSRSISKSRSPSP 267
>gi|357464165|ref|XP_003602364.1| RNA-binding protein [Medicago truncatula]
gi|355491412|gb|AES72615.1| RNA-binding protein [Medicago truncatula]
Length = 380
Score = 330 bits (845), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 172/202 (85%), Positives = 186/202 (92%), Gaps = 2/202 (0%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS RFSRTIYVGNLP+DIRE E+EDLFYKYGRI++IELK+PPRPPCYCFVEF+NARDAED
Sbjct: 108 MSSRFSRTIYVGNLPADIRESEIEDLFYKYGRIMEIELKVPPRPPCYCFVEFDNARDAED 167
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGYNFDGCRLRVELAHGG RGPSSSDRRG GGGG GG GG G AG GRFG+S
Sbjct: 168 AIRGRDGYNFDGCRLRVELAHGG--RGPSSSDRRGYGGGGGGGGRGGGGDSAGGGRFGVS 225
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
RHSE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGT+G+VDYTN +DMKYAIR
Sbjct: 226 RHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIR 285
Query: 181 KLDDTEFRNPWARGRITVKRYD 202
KLDDTEFRNPWAR I V++Y+
Sbjct: 286 KLDDTEFRNPWARSYIRVRKYE 307
>gi|42565781|ref|NP_190512.3| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|334185842|ref|NP_001190041.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|124301106|gb|ABN04805.1| At3g49430 [Arabidopsis thaliana]
gi|332645020|gb|AEE78541.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|332645022|gb|AEE78543.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
Length = 300
Score = 328 bits (840), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 198/269 (73%), Positives = 221/269 (82%), Gaps = 23/269 (8%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGRFSR+IYVGNLP DIRE+E+ED+FYKYGRI+DIELK+PPRPPCYCFVEFE++RDAED
Sbjct: 1 MSGRFSRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI+GRDGYN DGCRLRVELAHGG RG SSSDRRGGYGGGG+G GG G G A RFG+S
Sbjct: 61 AIKGRDGYNLDGCRLRVELAHGG--RGQSSSDRRGGYGGGGSGYGGGGGGGGSA-RFGVS 117
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
RHSE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEV+RDS+GTYGVVDYTN +DMKYAIR
Sbjct: 118 RHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIR 177
Query: 181 KLDDTEFRNPWARGRITVKRYD--------------------RSPSRSRSRSRSRSRSRS 220
KLDDTEFRNPWARG I VK+Y+ RS R RS SRSRS SRS
Sbjct: 178 KLDDTEFRNPWARGFIRVKKYESSRSRSRSPSRSRSRSRSRSRSRGRGRSHSRSRSLSRS 237
Query: 221 RIVRRNRSKSLERSVSRSVSRSMSASPVK 249
+ R++ SKS RS+SRS+S+S S SP K
Sbjct: 238 KSPRKDLSKSPRRSLSRSISKSRSPSPDK 266
>gi|145332797|ref|NP_001078264.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|332645021|gb|AEE78542.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
Length = 297
Score = 328 bits (840), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 198/269 (73%), Positives = 221/269 (82%), Gaps = 23/269 (8%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGRFSR+IYVGNLP DIRE+E+ED+FYKYGRI+DIELK+PPRPPCYCFVEFE++RDAED
Sbjct: 1 MSGRFSRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI+GRDGYN DGCRLRVELAHGG RG SSSDRRGGYGGGG+G GG G G A RFG+S
Sbjct: 61 AIKGRDGYNLDGCRLRVELAHGG--RGQSSSDRRGGYGGGGSGYGGGGGGGGSA-RFGVS 117
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
RHSE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEV+RDS+GTYGVVDYTN +DMKYAIR
Sbjct: 118 RHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIR 177
Query: 181 KLDDTEFRNPWARGRITVKRYD--------------------RSPSRSRSRSRSRSRSRS 220
KLDDTEFRNPWARG I VK+Y+ RS R RS SRSRS SRS
Sbjct: 178 KLDDTEFRNPWARGFIRVKKYESSRSRSRSPSRSRSRSRSRSRSRGRGRSHSRSRSLSRS 237
Query: 221 RIVRRNRSKSLERSVSRSVSRSMSASPVK 249
+ R++ SKS RS+SRS+S+S S SP K
Sbjct: 238 KSPRKDLSKSPRRSLSRSISKSRSPSPDK 266
>gi|12324445|gb|AAG52185.1|AC012329_12 putative splicing factor; 53460-55514 [Arabidopsis thaliana]
Length = 295
Score = 327 bits (839), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 198/269 (73%), Positives = 221/269 (82%), Gaps = 23/269 (8%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGRFSR+IYVGNLP DIRE+E+ED+FYKYGRI+DIELK+PPRPPCYCFVEFE++RDAED
Sbjct: 1 MSGRFSRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI+GRDGYN DGCRLRVELAHGG RG SSSDRRGGYGGGG+G GG G G A RFG+S
Sbjct: 61 AIKGRDGYNLDGCRLRVELAHGG--RGQSSSDRRGGYGGGGSGYGGGGGGGGSA-RFGVS 117
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
RHSE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEV+RDS+GTYGVVDYTN +DMKYAIR
Sbjct: 118 RHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIR 177
Query: 181 KLDDTEFRNPWARGRITVKRYD--------------------RSPSRSRSRSRSRSRSRS 220
KLDDTEFRNPWARG I VK+Y+ RS R RS SRSRS SRS
Sbjct: 178 KLDDTEFRNPWARGFIRVKKYESSRSRSRSPSRSRSRSRSRSRSRGRGRSHSRSRSLSRS 237
Query: 221 RIVRRNRSKSLERSVSRSVSRSMSASPVK 249
+ R++ SKS RS+SRS+S+S S SP K
Sbjct: 238 KSPRKDLSKSPRRSLSRSISKSRSPSPDK 266
>gi|255648057|gb|ACU24484.1| unknown [Glycine max]
Length = 267
Score = 325 bits (832), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 203/249 (81%), Positives = 218/249 (87%), Gaps = 9/249 (3%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGRFSRTIYVGNLPSDIRE E+EDLFYKYGRI+DIELK+PPRPPCYCFVEF+NARDAED
Sbjct: 1 MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGYNFDGCRLRVELAHGG RGPSSSDRR G GG GAG GRFGIS
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHGG--RGPSSSDRR-------GYGGGGGNGGAGGGRFGIS 111
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
RHSE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGT+G+VDYTN +DMKYAIR
Sbjct: 112 RHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIR 171
Query: 181 KLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRSRIVRRNRSKSLERSVSRSVS 240
KLDD EFRNPWAR I V++Y+ S SRSRSRS SRS SRSR +R RS+SLERSVS+S S
Sbjct: 172 KLDDAEFRNPWARAYIRVRKYESSRSRSRSRSPSRSPSRSRSPKRVRSRSLERSVSKSRS 231
Query: 241 RSMSASPVK 249
RS SASP+K
Sbjct: 232 RSQSASPIK 240
>gi|356516144|ref|XP_003526756.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
Length = 263
Score = 325 bits (832), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 171/202 (84%), Positives = 182/202 (90%), Gaps = 3/202 (1%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGRFSRTIYVGNLPSDIRE E+EDLFYKYGRI+DIELK+PPRPPCYCFVEF+NARDAED
Sbjct: 1 MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGYNFDGCRLRVELAHGG RGPSSSDRRG GGGG GG GG G GIS
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHGG--RGPSSSDRRGYGGGGGGGGGGGGSGAGGGRF-GIS 117
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
RHSE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGT+G+VDYTN +DMKYAIR
Sbjct: 118 RHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIR 177
Query: 181 KLDDTEFRNPWARGRITVKRYD 202
KLDDTEFRNPWAR I V++Y+
Sbjct: 178 KLDDTEFRNPWARAYIRVRKYE 199
>gi|357464169|ref|XP_003602366.1| RNA-binding protein [Medicago truncatula]
gi|355491414|gb|AES72617.1| RNA-binding protein [Medicago truncatula]
Length = 273
Score = 324 bits (831), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 172/202 (85%), Positives = 186/202 (92%), Gaps = 2/202 (0%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS RFSRTIYVGNLP+DIRE E+EDLFYKYGRI++IELK+PPRPPCYCFVEF+NARDAED
Sbjct: 1 MSSRFSRTIYVGNLPADIRESEIEDLFYKYGRIMEIELKVPPRPPCYCFVEFDNARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGYNFDGCRLRVELAHGG RGPSSSDRRG GGGG GG GG G AG GRFG+S
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHGG--RGPSSSDRRGYGGGGGGGGRGGGGDSAGGGRFGVS 118
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
RHSE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGT+G+VDYTN +DMKYAIR
Sbjct: 119 RHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIR 178
Query: 181 KLDDTEFRNPWARGRITVKRYD 202
KLDDTEFRNPWAR I V++Y+
Sbjct: 179 KLDDTEFRNPWARSYIRVRKYE 200
>gi|357464167|ref|XP_003602365.1| RNA-binding protein [Medicago truncatula]
gi|355491413|gb|AES72616.1| RNA-binding protein [Medicago truncatula]
Length = 272
Score = 324 bits (831), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 172/202 (85%), Positives = 186/202 (92%), Gaps = 2/202 (0%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS RFSRTIYVGNLP+DIRE E+EDLFYKYGRI++IELK+PPRPPCYCFVEF+NARDAED
Sbjct: 1 MSSRFSRTIYVGNLPADIRESEIEDLFYKYGRIMEIELKVPPRPPCYCFVEFDNARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGYNFDGCRLRVELAHGG RGPSSSDRRG GGGG GG GG G AG GRFG+S
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHGG--RGPSSSDRRGYGGGGGGGGRGGGGDSAGGGRFGVS 118
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
RHSE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGT+G+VDYTN +DMKYAIR
Sbjct: 119 RHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIR 178
Query: 181 KLDDTEFRNPWARGRITVKRYD 202
KLDDTEFRNPWAR I V++Y+
Sbjct: 179 KLDDTEFRNPWARSYIRVRKYE 200
>gi|224132592|ref|XP_002321360.1| predicted protein [Populus trichocarpa]
gi|222868356|gb|EEF05487.1| predicted protein [Populus trichocarpa]
Length = 240
Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 166/202 (82%), Positives = 176/202 (87%), Gaps = 12/202 (5%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGRFSRTIYVGNLP+DIRE E+EDLFYKYGRILD+ELKIPPRPPCYCFVEFENARDAED
Sbjct: 1 MSGRFSRTIYVGNLPADIRESEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGYNFDGCRLRVELAHGG RGPSS+D G G G GRFGIS
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHGG--RGPSSND----------RRGGYGGGGGSGGRFGIS 108
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
RHSE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDS+GT+GVVDYTN EDMKYAIR
Sbjct: 109 RHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSDGTFGVVDYTNHEDMKYAIR 168
Query: 181 KLDDTEFRNPWARGRITVKRYD 202
KLDDTEFRNPWAR I VK+++
Sbjct: 169 KLDDTEFRNPWARAYIRVKQHE 190
>gi|224120944|ref|XP_002318458.1| predicted protein [Populus trichocarpa]
gi|222859131|gb|EEE96678.1| predicted protein [Populus trichocarpa]
Length = 280
Score = 320 bits (821), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 172/203 (84%), Positives = 183/203 (90%), Gaps = 3/203 (1%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGRFSRTIYVGNLP+DIRE +VEDLFYKYGRILD+ELKIPPRPPCYCFVEFENARDAED
Sbjct: 1 MSGRFSRTIYVGNLPADIRESKVEDLFYKYGRILDVELKIPPRPPCYCFVEFENARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRR-GGYGGGGAGGAGGAGAGAGAGRFGI 119
AIRGRDGYNFDG RLRVELAHG GRGPSS+DRR G GGGG GG GG G G G GR GI
Sbjct: 61 AIRGRDGYNFDGSRLRVELAHG--GRGPSSNDRRGGYGGGGGGGGGGGGGGGGGGGRLGI 118
Query: 120 SRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAI 179
SRHSE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEV+RD +GT G+VDYTN EDMKYAI
Sbjct: 119 SRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDGDGTLGLVDYTNHEDMKYAI 178
Query: 180 RKLDDTEFRNPWARGRITVKRYD 202
RKLDDTEF+NPWAR I VK+Y+
Sbjct: 179 RKLDDTEFKNPWARAYIRVKQYE 201
>gi|363807302|ref|NP_001242110.1| uncharacterized protein LOC100786491 [Glycine max]
gi|255636783|gb|ACU18725.1| unknown [Glycine max]
Length = 267
Score = 317 bits (812), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 169/202 (83%), Positives = 179/202 (88%), Gaps = 9/202 (4%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGRFSRTIYVGNLPSDIRE E+EDLFYKYGRI+DIELK+PPRPPCYCFVEF+NARDAED
Sbjct: 1 MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGYNFDGCRLRVELAHGG RGPSSSDRR G GG GAG GRFGIS
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHGG--RGPSSSDRR-------GYGGGGGNGGAGGGRFGIS 111
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
RHSE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGT G+VDYTN +DMKYAIR
Sbjct: 112 RHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTLGIVDYTNYDDMKYAIR 171
Query: 181 KLDDTEFRNPWARGRITVKRYD 202
KLDDTEFRNPWA I V++Y+
Sbjct: 172 KLDDTEFRNPWAIAYIRVRKYE 193
>gi|76573323|gb|ABA46766.1| pre-mRNA splicing factor-like protein [Solanum tuberosum]
Length = 269
Score = 308 bits (790), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 176/250 (70%), Positives = 189/250 (75%), Gaps = 14/250 (5%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGRFSR+IYVGNLP+DI+E EVEDLFYKYGRILDIELKIPPRPPCYCFVEFE++RDAED
Sbjct: 1 MSGRFSRSIYVGNLPADIKELEVEDLFYKYGRILDIELKIPPRPPCYCFVEFESSRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGYNFDGCRLRVELAHGG RGPSSS G G G GR GIS
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHGG--RGPSSS------SDRRGSYGSSGGGGGGGGRHGIS 112
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
RHS+YRVI+RGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGT+G+VDYTN EDMKYAIR
Sbjct: 113 RHSDYRVIIRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYEDMKYAIR 172
Query: 181 KLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRSRIVRRNRSKSLERSVSRS-V 239
KLDDTEFRNPW R I V+ Y + R +S RSVSRS
Sbjct: 173 KLDDTEFRNPWTRTYIRVREY-----KGSPSRSRSRSRSRSRTPRKSRRSPARSVSRSPP 227
Query: 240 SRSMSASPVK 249
+S SASPVK
Sbjct: 228 PKSRSASPVK 237
>gi|449456443|ref|XP_004145959.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor SF2-like
[Cucumis sativus]
Length = 248
Score = 289 bits (739), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 163/232 (70%), Positives = 178/232 (76%), Gaps = 23/232 (9%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS RFSRTIYVGNLPSDI+EYE+EDLFYKYGRILDIELKIPPRPPCYCFVEFE+ RDAED
Sbjct: 1 MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIR RDGYNFDGCRLRVELAHGG RGPSSSDRR YG G G G F +
Sbjct: 61 AIRARDGYNFDGCRLRVELAHGG--RGPSSSDRRSSYG---------GGGGGGGQGFLLL 109
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
+ + ++ +DHMRKAGDVCFAEVSRDSEGT+G+VDYTN +DMKYAIR
Sbjct: 110 DYVDMMNLLEXC--------FQDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIR 161
Query: 181 KLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRSRIVRRNRSKSLE 232
KLDDTEFRNPWAR I VK+YD SP+RSRSRS RSR+ RRNRSKS E
Sbjct: 162 KLDDTEFRNPWARAYIRVKKYDGSPTRSRSRSXERSRT----ARRNRSKSAE 209
>gi|6561944|emb|CAB62448.1| PRE-MRNA SPLICING FACTOR SF2-like protein [Arabidopsis thaliana]
Length = 243
Score = 288 bits (738), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 152/182 (83%), Positives = 168/182 (92%), Gaps = 3/182 (1%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGRFSR+IYVGNLP DIRE+E+ED+FYKYGRI+DIELK+PPRPPCYCFVEFE++RDAED
Sbjct: 1 MSGRFSRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI+GRDGYN DGCRLRVELAHG GRG SSSDRRGGYGGGG+G GG G G A RFG+S
Sbjct: 61 AIKGRDGYNLDGCRLRVELAHG--GRGQSSSDRRGGYGGGGSGYGGGGGGGGSA-RFGVS 117
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
RHSE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEV+RDS+GTYGVVDYTN +DMKYA+R
Sbjct: 118 RHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAVR 177
Query: 181 KL 182
L
Sbjct: 178 NL 179
>gi|147788227|emb|CAN71592.1| hypothetical protein VITISV_015931 [Vitis vinifera]
Length = 267
Score = 287 bits (735), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 176/250 (70%), Positives = 191/250 (76%), Gaps = 29/250 (11%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGRFSRTIYVGNLPSDIREYE+EDLFYKYGRILD+ELKIPPRPPCYCFVEFEN+RDAED
Sbjct: 1 MSGRFSRTIYVGNLPSDIREYEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENSRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGYNFDGCRLRVELAHGG G+ SSSDRRGG+G GG G G + G + I
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHGGRGQS-SSSDRRGGHGSGGGGRFGVSRHSEYRGAYEIG 119
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYA-- 178
R+ W DHMRKAGDVCFAEVSRD++GT+G+VDYTN EDMKYA
Sbjct: 120 RY--------------CWN--LDHMRKAGDVCFAEVSRDADGTFGLVDYTNHEDMKYAQL 163
Query: 179 -------IRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRSRIVRRNRSKSL 231
IRKLDDTEFRNPWAR I VKRYD RSRSRS S SRSR ++RNRSKSL
Sbjct: 164 TCSSLSQIRKLDDTEFRNPWARAYIRVKRYD---VSPRSRSRSHSPSRSRSLKRNRSKSL 220
Query: 232 ERSVSRSVSR 241
ERSVSRS S+
Sbjct: 221 ERSVSRSASK 230
>gi|148909953|gb|ABR18062.1| unknown [Picea sitchensis]
Length = 331
Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 144/201 (71%), Positives = 162/201 (80%), Gaps = 13/201 (6%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIRE EVEDLFYKYG I+DI+LKIPPRPP YCF+EFE+ARDAED
Sbjct: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIVDIDLKIPPRPPGYCFIEFEDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGYNFDG RLRVELAHGG G+ S++DR Y AGG G G+S
Sbjct: 61 AIRGRDGYNFDGNRLRVELAHGGRGQS-STNDRYSSYSS--AGGRSG----------GVS 107
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R SEYRV+V GLPSSASWQDLKDHMR+AGDVCF++V RDS GT G+VDYTN +DMKYAIR
Sbjct: 108 RRSEYRVLVSGLPSSASWQDLKDHMRRAGDVCFSQVFRDSSGTTGIVDYTNYDDMKYAIR 167
Query: 181 KLDDTEFRNPWARGRITVKRY 201
KLDD+EFRN ++RG I VK Y
Sbjct: 168 KLDDSEFRNAFSRGYIRVKEY 188
>gi|168000741|ref|XP_001753074.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695773|gb|EDQ82115.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 279
Score = 276 bits (706), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 149/214 (69%), Positives = 171/214 (79%), Gaps = 4/214 (1%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP D+RE E+EDLFYKYGRI+DI+LK+PPRPP YCF+EFE+ARDAED
Sbjct: 1 MSSRASRTIYVGNLPGDVREREIEDLFYKYGRIVDIDLKLPPRPPGYCFIEFEDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGYNFDG RLRVE+AHGG G P+S DR Y GG G GG+ + G G+S
Sbjct: 61 AIRGRDGYNFDGNRLRVEIAHGGRGPPPASVDRYSIYSSGGGRGGGGSASENGGRAGGVS 120
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRD-SEGTYGVVDYTNPEDMKYAI 179
R SEYRV V GLPSSASWQDLKDHMR+AGDVCFA+V RD S GT G+VD+TN +DMKYAI
Sbjct: 121 RRSEYRVTVTGLPSSASWQDLKDHMRRAGDVCFAQVFRDGSAGTMGIVDFTNYDDMKYAI 180
Query: 180 RKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSR 213
RKLDD+EFRNP++R I V ++SRSRSR
Sbjct: 181 RKLDDSEFRNPFSRSFIRVC---LCVTKSRSRSR 211
>gi|168043399|ref|XP_001774172.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674440|gb|EDQ60948.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 240
Score = 271 bits (692), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 137/198 (69%), Positives = 158/198 (79%), Gaps = 16/198 (8%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP D+RE E+ED+FYKYGRI+DI+LK+PPRPP YCF+EFE+ARDAED
Sbjct: 1 MSSRASRTIYVGNLPGDVREREIEDIFYKYGRIVDIDLKLPPRPPGYCFLEFEDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGYNFDG RLRVE+AHGG G P + DR GG AG G+S
Sbjct: 61 AIRGRDGYNFDGNRLRVEIAHGGRG-PPPAVDRSAAESGGRAG--------------GVS 105
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R SEYRV+V GLPSSASWQDLKDHMR+AGDVCFA+V RD+ GT G+VD+TN +DMKYAIR
Sbjct: 106 RRSEYRVMVTGLPSSASWQDLKDHMRRAGDVCFAQVFRDA-GTMGIVDFTNYDDMKYAIR 164
Query: 181 KLDDTEFRNPWARGRITV 198
KLDD+EFRNP++R I V
Sbjct: 165 KLDDSEFRNPFSRSFIRV 182
>gi|148908052|gb|ABR17145.1| unknown [Picea sitchensis]
Length = 263
Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 137/201 (68%), Positives = 159/201 (79%), Gaps = 10/201 (4%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R +RT+YVGNLP D+RE E+EDLFYKYGRI+D++LK+PPRPP YCF+EFE+ARDAED
Sbjct: 1 MSSRMTRTLYVGNLPGDVREGEIEDLFYKYGRIIDVDLKVPPRPPGYCFIEFEDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGYNFDG R+RVE AHGG R SS R Y + AG GR G++
Sbjct: 61 AIRGRDGYNFDGHRIRVEFAHGGR-RTSSSLGRPSSYS---------SIAGGRGGRGGVT 110
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
RH++YRV+V GLPSSASWQDLKDHMR+AGDVC+AEV RDS GT G VDYTN EDMKYAIR
Sbjct: 111 RHTDYRVLVTGLPSSASWQDLKDHMRRAGDVCYAEVFRDSNGTRGTVDYTNLEDMKYAIR 170
Query: 181 KLDDTEFRNPWARGRITVKRY 201
KLDD+EFRN ++R I VK Y
Sbjct: 171 KLDDSEFRNAFSRSYIQVKEY 191
>gi|108708089|gb|ABF95884.1| Pre-mRNA splicing factor SF2, putative, expressed [Oryza sativa
Japonica Group]
gi|215692748|dbj|BAG88168.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218192809|gb|EEC75236.1| hypothetical protein OsI_11526 [Oryza sativa Indica Group]
gi|222624911|gb|EEE59043.1| hypothetical protein OsJ_10806 [Oryza sativa Japonica Group]
Length = 286
Score = 270 bits (689), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 141/202 (69%), Positives = 158/202 (78%), Gaps = 14/202 (6%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R+SRTIYVGNLP DIRE EVEDLFYKYGRI+DI+LKIPPRPP Y FVEFE+ RDAE+
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAEE 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
A GRDGYNFDG RLRVE AHGG G G SS DR + G GR G+S
Sbjct: 61 ACAGRDGYNFDGHRLRVEPAHGGRGNGGSSFDRPSNF--------------GGGGRRGVS 106
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
RHSEYRV+V GLPSSASWQDLKDHMRKAGDVCF+EV R+ GT G+VDYTN +DMKYAI+
Sbjct: 107 RHSEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIK 166
Query: 181 KLDDTEFRNPWARGRITVKRYD 202
KLDD+EFRN +++G I VK YD
Sbjct: 167 KLDDSEFRNAFSKGHIRVKEYD 188
>gi|302791860|ref|XP_002977696.1| hypothetical protein SELMODRAFT_107678 [Selaginella moellendorffii]
gi|300154399|gb|EFJ21034.1| hypothetical protein SELMODRAFT_107678 [Selaginella moellendorffii]
Length = 298
Score = 270 bits (689), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 133/196 (67%), Positives = 155/196 (79%), Gaps = 17/196 (8%)
Query: 4 RFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIR 63
R SRTIYVGNLP D+RE E++DLF+KYG I+DI+LK+PPRPP YCF+EFE+ RDAEDAIR
Sbjct: 3 RSSRTIYVGNLPGDVREREIDDLFHKYGPIVDIDLKLPPRPPGYCFIEFEDVRDAEDAIR 62
Query: 64 GRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHS 123
GRDGYNFDG RLRVE+AHG GRGP SSDR YGG G +SR S
Sbjct: 63 GRDGYNFDGYRLRVEIAHG--GRGPPSSDRYSSYGGRGG---------------SVSRRS 105
Query: 124 EYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLD 183
EYRVI+ GLPSSASWQDLKDHMR+AGDVCFA+V R+ GT G+VD+TN +DMKYAI+KLD
Sbjct: 106 EYRVIITGLPSSASWQDLKDHMRRAGDVCFAQVFREGNGTTGIVDFTNYDDMKYAIKKLD 165
Query: 184 DTEFRNPWARGRITVK 199
D+EFRNP++R I VK
Sbjct: 166 DSEFRNPFSRSYIRVK 181
>gi|108708090|gb|ABF95885.1| Pre-mRNA splicing factor SF2, putative, expressed [Oryza sativa
Japonica Group]
Length = 236
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 141/202 (69%), Positives = 158/202 (78%), Gaps = 14/202 (6%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R+SRTIYVGNLP DIRE EVEDLFYKYGRI+DI+LKIPPRPP Y FVEFE+ RDAE+
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAEE 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
A GRDGYNFDG RLRVE AHGG G G SS DR + G GR G+S
Sbjct: 61 ACAGRDGYNFDGHRLRVEPAHGGRGNGGSSFDRPSNF--------------GGGGRRGVS 106
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
RHSEYRV+V GLPSSASWQDLKDHMRKAGDVCF+EV R+ GT G+VDYTN +DMKYAI+
Sbjct: 107 RHSEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIK 166
Query: 181 KLDDTEFRNPWARGRITVKRYD 202
KLDD+EFRN +++G I VK YD
Sbjct: 167 KLDDSEFRNAFSKGHIRVKEYD 188
>gi|302795628|ref|XP_002979577.1| hypothetical protein SELMODRAFT_36388 [Selaginella moellendorffii]
gi|300152825|gb|EFJ19466.1| hypothetical protein SELMODRAFT_36388 [Selaginella moellendorffii]
Length = 236
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 133/196 (67%), Positives = 155/196 (79%), Gaps = 17/196 (8%)
Query: 4 RFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIR 63
R SRTIYVGNLP D+RE E++DLF+KYG I+DI+LK+PPRPP YCF+EFE+ RDAEDAIR
Sbjct: 1 RSSRTIYVGNLPGDVREREIDDLFHKYGPIVDIDLKLPPRPPGYCFIEFEDVRDAEDAIR 60
Query: 64 GRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHS 123
GRDGYNFDG RLRVE+AHG GRGP SSDR YGG G +SR S
Sbjct: 61 GRDGYNFDGYRLRVEIAHG--GRGPPSSDRYSSYGGRGG---------------SVSRRS 103
Query: 124 EYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLD 183
EYRVI+ GLPSSASWQDLKDHMR+AGDVCFA+V R+ GT G+VD+TN +DMKYAI+KLD
Sbjct: 104 EYRVIITGLPSSASWQDLKDHMRRAGDVCFAQVFREGNGTTGIVDFTNYDDMKYAIKKLD 163
Query: 184 DTEFRNPWARGRITVK 199
D+EFRNP++R I VK
Sbjct: 164 DSEFRNPFSRSYIRVK 179
>gi|357112280|ref|XP_003557937.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Brachypodium
distachyon]
Length = 289
Score = 267 bits (683), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 141/202 (69%), Positives = 161/202 (79%), Gaps = 8/202 (3%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R+SRTIYVGNLP DIRE EVEDLFYKYGRI+DI+LK+PPRPP Y FVEFE+ RDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDPRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
A GRDGYNFDG RLRVE AHGG G G S DR +GGGG GG GG +S
Sbjct: 61 ACAGRDGYNFDGNRLRVEPAHGGRGSGGPSHDRSSSFGGGGGGGGGGRRG--------VS 112
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
RH++YRV+V GLPSSASWQDLKDHMR+AGDVCF+EV R+ GT G+VDYTN +DMKYAI+
Sbjct: 113 RHTDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSEVYREGSGTTGIVDYTNYDDMKYAIK 172
Query: 181 KLDDTEFRNPWARGRITVKRYD 202
KLDDTEF+N +++G I VK YD
Sbjct: 173 KLDDTEFKNAFSKGYIRVKEYD 194
>gi|115452963|ref|NP_001050082.1| Os03g0344100 [Oryza sativa Japonica Group]
gi|113548553|dbj|BAF11996.1| Os03g0344100 [Oryza sativa Japonica Group]
Length = 264
Score = 266 bits (680), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 141/202 (69%), Positives = 158/202 (78%), Gaps = 14/202 (6%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R+SRTIYVGNLP DIRE EVEDLFYKYGRI+DI+LKIPPRPP Y FVEFE+ RDAE+
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAEE 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
A GRDGYNFDG RLRVE AHGG G G SS DR + G GR G+S
Sbjct: 61 ACAGRDGYNFDGHRLRVEPAHGGRGNGGSSFDRPSNF--------------GGGGRRGVS 106
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
RHSEYRV+V GLPSSASWQDLKDHMRKAGDVCF+EV R+ GT G+VDYTN +DMKYAI+
Sbjct: 107 RHSEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIK 166
Query: 181 KLDDTEFRNPWARGRITVKRYD 202
KLDD+EFRN +++G I VK YD
Sbjct: 167 KLDDSEFRNAFSKGHIRVKEYD 188
>gi|33146854|dbj|BAC79849.1| putative pre-mRNA splicing factor SF2 [Oryza sativa Japonica Group]
Length = 362
Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 136/202 (67%), Positives = 157/202 (77%), Gaps = 17/202 (8%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R+SRTIYVGNLP DIRE EVEDLFYKYGRI+DI+LKIPPRPP + FVEFE+ RDAED
Sbjct: 67 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAED 126
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGYNFDG RLRVELAHGG G S ++ +G G R G+S
Sbjct: 127 AIRGRDGYNFDGNRLRVELAHGGRGNSSSFNN-----------------SGGGGRRGGVS 169
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
RH+EYRV+V GLPSSASWQDLKDHMR AGDVC++EV R+ GT G+VDYTN +DMKYAIR
Sbjct: 170 RHTEYRVLVTGLPSSASWQDLKDHMRNAGDVCYSEVYREGGGTIGIVDYTNYDDMKYAIR 229
Query: 181 KLDDTEFRNPWARGRITVKRYD 202
KLDD+EF+N +++ I VK YD
Sbjct: 230 KLDDSEFKNAFSKAYIRVKEYD 251
>gi|115474019|ref|NP_001060608.1| Os07g0673500 [Oryza sativa Japonica Group]
gi|113612144|dbj|BAF22522.1| Os07g0673500 [Oryza sativa Japonica Group]
Length = 296
Score = 265 bits (678), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 136/202 (67%), Positives = 157/202 (77%), Gaps = 17/202 (8%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R+SRTIYVGNLP DIRE EVEDLFYKYGRI+DI+LKIPPRPP + FVEFE+ RDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGYNFDG RLRVELAHGG G S ++ +G G R G+S
Sbjct: 61 AIRGRDGYNFDGNRLRVELAHGGRGNSSSFNN-----------------SGGGGRRGGVS 103
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
RH+EYRV+V GLPSSASWQDLKDHMR AGDVC++EV R+ GT G+VDYTN +DMKYAIR
Sbjct: 104 RHTEYRVLVTGLPSSASWQDLKDHMRNAGDVCYSEVYREGGGTIGIVDYTNYDDMKYAIR 163
Query: 181 KLDDTEFRNPWARGRITVKRYD 202
KLDD+EF+N +++ I VK YD
Sbjct: 164 KLDDSEFKNAFSKAYIRVKEYD 185
>gi|449485688|ref|XP_004157245.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
Length = 322
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 141/218 (64%), Positives = 159/218 (72%), Gaps = 16/218 (7%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIR EVEDLFYKYG I+DI+LKIPPRPP Y FVEFE+ RDAED
Sbjct: 1 MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGY FDGCRLRVE AHGG G SS DR + +G+ R G+
Sbjct: 61 AIYGRDGYKFDGCRLRVEFAHGGRGHS-SSVDRY---------------SRSGSSRGGVP 104
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R ++YRV+V GLPSSASWQDLKDHMR+AGDVCF+EV RD G G+VDYTN +DMKYAIR
Sbjct: 105 RRTDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIR 164
Query: 181 KLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRS 218
KLDD+EFRN ++R + VK YD S SRS S RS
Sbjct: 165 KLDDSEFRNAFSRAYVRVKEYDSRHSYSRSPSLDSRRS 202
>gi|222637670|gb|EEE67802.1| hypothetical protein OsJ_25544 [Oryza sativa Japonica Group]
Length = 338
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 136/202 (67%), Positives = 157/202 (77%), Gaps = 17/202 (8%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R+SRTIYVGNLP DIRE EVEDLFYKYGRI+DI+LKIPPRPP + FVEFE+ RDAED
Sbjct: 67 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAED 126
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGYNFDG RLRVELAHGG G S ++ +G G R G+S
Sbjct: 127 AIRGRDGYNFDGNRLRVELAHGGRGNSSSFNN-----------------SGGGGRRGGVS 169
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
RH+EYRV+V GLPSSASWQDLKDHMR AGDVC++EV R+ GT G+VDYTN +DMKYAIR
Sbjct: 170 RHTEYRVLVTGLPSSASWQDLKDHMRNAGDVCYSEVYREGGGTIGIVDYTNYDDMKYAIR 229
Query: 181 KLDDTEFRNPWARGRITVKRYD 202
KLDD+EF+N +++ I VK YD
Sbjct: 230 KLDDSEFKNAFSKAYIRVKEYD 251
>gi|168009612|ref|XP_001757499.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691193|gb|EDQ77556.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 262
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 142/199 (71%), Positives = 161/199 (80%), Gaps = 3/199 (1%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP D+RE E+EDLFYKYGRI+DI+LK+PPRPP YCF+EFE+ RDAED
Sbjct: 1 MSSRASRTIYVGNLPGDVREREIEDLFYKYGRIVDIDLKLPPRPPGYCFIEFEDGRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGYNFDG RLRVE+AHGG G P + DR Y GG GG G A A G G+S
Sbjct: 61 AIRGRDGYNFDGNRLRVEIAHGGRG-PPPAVDRYSIYSSGGRGGGGSA-ADCGGRAGGVS 118
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRD-SEGTYGVVDYTNPEDMKYAI 179
R SEYRV V GLPSSASWQDLKDHMR+AGDVCFA+V RD + GT G+VD+TN +DMKYAI
Sbjct: 119 RRSEYRVTVTGLPSSASWQDLKDHMRRAGDVCFAQVFRDGTSGTMGIVDFTNYDDMKYAI 178
Query: 180 RKLDDTEFRNPWARGRITV 198
RKLDD+EFRNP++R I V
Sbjct: 179 RKLDDSEFRNPFSRSFIRV 197
>gi|357121520|ref|XP_003562467.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Brachypodium
distachyon]
Length = 288
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 140/201 (69%), Positives = 159/201 (79%), Gaps = 12/201 (5%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R+SRTIYVGNLP DIRE EVEDLFYKYGRI++I+LK+PPRPP + FVEFE+ RDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVELAHGG R SSS + G G G G R G+S
Sbjct: 61 AIHGRDGYNFDGNRLRVELAHGG--RANSSS----------LPNSYGGGGGGGGRRGGVS 108
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
RH+EYRV+V GLPSSASWQDLKDHMRKAGDVCF+EV R+ +GT G+VDYTN +DMKYAIR
Sbjct: 109 RHTEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGDGTTGIVDYTNYDDMKYAIR 168
Query: 181 KLDDTEFRNPWARGRITVKRY 201
KLDD+EFRN ++R I VK Y
Sbjct: 169 KLDDSEFRNAFSRAPIRVKEY 189
>gi|326490421|dbj|BAJ84874.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326522680|dbj|BAJ88386.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 286
Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 135/201 (67%), Positives = 154/201 (76%), Gaps = 16/201 (7%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R+SRTIYVGNLP DIRE EVEDLFYKYGRI++I+LK+PPRPP + FVEFE+ RDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI+GRDGYNFDG RLRVELAHGG S + G G R G+S
Sbjct: 61 AIQGRDGYNFDGNRLRVELAHGGRANSSSLPNSHG----------------GGGRRGGVS 104
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
RH+EYRV+V GLPSSASWQDLKDHMRKAGDVCF+EV R+ GT G+VDYTN +DMKYAIR
Sbjct: 105 RHTEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIR 164
Query: 181 KLDDTEFRNPWARGRITVKRY 201
KLDDTEF+N ++R I VK Y
Sbjct: 165 KLDDTEFKNAFSRAPIRVKEY 185
>gi|215741122|dbj|BAG97617.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 247
Score = 264 bits (674), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 136/202 (67%), Positives = 157/202 (77%), Gaps = 17/202 (8%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R+SRTIYVGNLP DIRE EVEDLFYKYGRI+DI+LKIPPRPP + FVEFE+ RDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGYNFDG RLRVELAHGG G S ++ +G G R G+S
Sbjct: 61 AIRGRDGYNFDGNRLRVELAHGGRGNSSSFNN-----------------SGGGGRRGGVS 103
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
RH+EYRV+V GLPSSASWQDLKDHMR AGDVC++EV R+ GT G+VDYTN +DMKYAIR
Sbjct: 104 RHTEYRVLVTGLPSSASWQDLKDHMRNAGDVCYSEVYREGGGTIGIVDYTNYDDMKYAIR 163
Query: 181 KLDDTEFRNPWARGRITVKRYD 202
KLDD+EF+N +++ I VK YD
Sbjct: 164 KLDDSEFKNAFSKAYIRVKEYD 185
>gi|68037673|gb|AAY84884.1| alternative splicing regulator [Triticum aestivum]
Length = 284
Score = 263 bits (673), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 138/201 (68%), Positives = 156/201 (77%), Gaps = 16/201 (7%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R+SRTIYVGNLP DIRE EVEDLFYKYGRI++I+LK+PPRPP + FVEFE+ RDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVELAHGG +SS YGGGG G +S
Sbjct: 61 AIHGRDGYNFDGNRLRVELAHGGRA---NSSSLPNSYGGGGRRGG-------------VS 104
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
RH+EYRV+V GLPSSASWQDLKDHMRKAGDVCF+EV R+ GT G+VDYTN +DMKYAIR
Sbjct: 105 RHTEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIR 164
Query: 181 KLDDTEFRNPWARGRITVKRY 201
KLDDTEF+N ++R I VK Y
Sbjct: 165 KLDDTEFKNAFSRAPIRVKEY 185
>gi|55792397|gb|AAV65309.1| splicing factor SF2-like protein [Hordeum vulgare subsp. vulgare]
Length = 245
Score = 263 bits (672), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 135/201 (67%), Positives = 154/201 (76%), Gaps = 16/201 (7%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R+SRTIYVGNLP DIRE EVEDLFYKYGRI++I+LK+PPRPP + FVEFE+ RDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI+GRDGYNFDG RLRVELAHGG S + G G R G+S
Sbjct: 61 AIQGRDGYNFDGNRLRVELAHGGRANSSSLPN----------------SHGGGGRRGGVS 104
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
RH+EYRV+V GLPSSASWQDLKDHMRKAGDVCF+EV R+ GT G+VDYTN +DMKYAIR
Sbjct: 105 RHTEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREVVGTIGIVDYTNYDDMKYAIR 164
Query: 181 KLDDTEFRNPWARGRITVKRY 201
KLDDTEF+N ++R I VK Y
Sbjct: 165 KLDDTEFKNAFSRAPIRVKEY 185
>gi|218188085|gb|EEC70512.1| hypothetical protein OsI_01613 [Oryza sativa Indica Group]
Length = 447
Score = 263 bits (671), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 137/202 (67%), Positives = 153/202 (75%), Gaps = 15/202 (7%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIRE EVEDLFYKYGRILDI+LKIPPRPP Y FVEFE+ RDA+D
Sbjct: 190 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 249
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRD YNFDG RLRVELAHGG G+ S DR Y G G G+S
Sbjct: 250 AICGRDRYNFDGYRLRVELAHGGRGQS-YSYDRPRSYSSGRRG--------------GVS 294
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R SEYRV+V GLPSSASWQDLKDHMR+AGDVCF++V R++ T G+VDYT EDMKYAIR
Sbjct: 295 RRSEYRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGATVGIVDYTTYEDMKYAIR 354
Query: 181 KLDDTEFRNPWARGRITVKRYD 202
KLDD+EFRN ++R I V+ YD
Sbjct: 355 KLDDSEFRNAFSRAYIRVREYD 376
>gi|242040955|ref|XP_002467872.1| hypothetical protein SORBIDRAFT_01g035680 [Sorghum bicolor]
gi|241921726|gb|EER94870.1| hypothetical protein SORBIDRAFT_01g035680 [Sorghum bicolor]
gi|448878354|gb|AGE46140.1| arginine/serine-rich splicing factor SR32 transcript I [Sorghum
bicolor]
Length = 286
Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 145/202 (71%), Positives = 159/202 (78%), Gaps = 12/202 (5%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R+SRTIYVGNLP DIRE EVEDLFYKYGRI+DI+LK+PPRPP Y FVEFE+ARDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVE AHGG G SS DR + G G G G R G+S
Sbjct: 61 AIAGRDGYNFDGHRLRVEAAHGGRGNT-SSYDR-----------SSGFGGGGGGARRGVS 108
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
RHSEYRV+V GLPSSASWQDLKDHMRKAGDVCF+EV R+ GT G+VDYTN +DMKYAI+
Sbjct: 109 RHSEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIK 168
Query: 181 KLDDTEFRNPWARGRITVKRYD 202
KLDDTEFRN + R I VK YD
Sbjct: 169 KLDDTEFRNAFGRAYIRVKEYD 190
>gi|294461096|gb|ADE76115.1| unknown [Picea sitchensis]
Length = 298
Score = 260 bits (665), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 151/283 (53%), Positives = 179/283 (63%), Gaps = 54/283 (19%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M R +R +YVGNLP D RE ++ED+F+KYG ++ I+LK PPRPP YCF+EFENARDAED
Sbjct: 1 MGSRSNRILYVGNLPVDFRERDIEDIFHKYGPVVKIDLKFPPRPPGYCFIEFENARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGY+ DG RLRVELAHGG RG S DR + GG G GR +
Sbjct: 61 AIRGRDGYDIDGHRLRVELAHGG--RGALSVDRYSSFSSGG---------GRRNGR--LQ 107
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
H +YRV + GLPSSASWQDLKDHMR+AGDV FA+V RDS GT GVVDYTN +DMKYAIR
Sbjct: 108 SHCDYRVTISGLPSSASWQDLKDHMRRAGDVTFAQVFRDSNGTTGVVDYTNYDDMKYAIR 167
Query: 181 KLDDTEFRNPWARGRITVKRY--------------------------------------D 202
KLDDTEF+NP++R I VK Y
Sbjct: 168 KLDDTEFKNPFSRSYIRVKEYGSKGSMSRSRSRSFSRSRSRSRSRSRSRSHSHSRTRSPS 227
Query: 203 RSPSRSRSRSRS---RSRSRSRIVRRNRSKSLERSVSRSVSRS 242
RSP+ SR + S RSRSRS ++R RSK + R+ SRS SR+
Sbjct: 228 RSPNVSRRKVHSKPLRSRSRSGSMQRPRSKPVPRTKSRSRSRT 270
>gi|448878356|gb|AGE46141.1| arginine/serine-rich splicing factor SR32 transcript II [Sorghum
bicolor]
Length = 322
Score = 260 bits (664), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 144/202 (71%), Positives = 159/202 (78%), Gaps = 12/202 (5%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R+SRTIYVGNLP DIRE EVEDLFYKYGRI+DI+LK+PPRPP Y FVEFE+ARDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVE AHGG RG +SS + G G G G R G+S
Sbjct: 61 AIAGRDGYNFDGHRLRVEAAHGG--RGNTSS----------YDRSSGFGGGGGGARRGVS 108
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
RHSEYRV+V GLPSSASWQDLKDHMRKAGDVCF+EV R+ GT G+VDYTN +DMKYAI+
Sbjct: 109 RHSEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIK 168
Query: 181 KLDDTEFRNPWARGRITVKRYD 202
KLDDTEFRN + R I VK YD
Sbjct: 169 KLDDTEFRNAFGRAYIRVKEYD 190
>gi|226504020|ref|NP_001150424.1| pre-mRNA-splicing factor SF2 [Zea mays]
gi|195639150|gb|ACG39043.1| pre-mRNA-splicing factor SF2 [Zea mays]
Length = 263
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 144/236 (61%), Positives = 171/236 (72%), Gaps = 29/236 (12%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIRE EVEDLFYKYGRILDI+LKIPPRPP Y FVEFE+ RDA+D
Sbjct: 4 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 63
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVELAHGG G+ S + + + A R G+S
Sbjct: 64 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYD---------------RSSSYSSACRGGVS 108
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V R++ T G+VDYTN +DMKYAIR
Sbjct: 109 RRSDFRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKYAIR 168
Query: 181 KLDDTEFRNPWARGRITVKRYD-------------RSPSRSRSRS-RSRSRSRSRI 222
KLDD++FRN ++R I V+ YD R+PS SRSRS +S S+S S +
Sbjct: 169 KLDDSQFRNAFSRAYIRVREYDARSRSRSRSHSYSRTPSYSRSRSPKSVSQSPSSV 224
>gi|413955773|gb|AFW88422.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [Zea mays]
Length = 283
Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 138/202 (68%), Positives = 154/202 (76%), Gaps = 13/202 (6%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R+SRTIYVGNLP DIRE EVEDLFYKYG+I+DI+LK+PPRPP Y FVEFE+ RDAE+
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGKIVDIDLKVPPRPPGYAFVEFEDPRDAEE 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVE AHGG G SS D G G R G+S
Sbjct: 61 AIAGRDGYNFDGHRLRVEAAHGGRGNA-SSHD------------RSSGFGGGGGARRGVS 107
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
RHSEYRV+V GLPSSASWQDLKDHMRKAGDVCF+EV R+ GT G+VDYTN +DMKYAI+
Sbjct: 108 RHSEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIK 167
Query: 181 KLDDTEFRNPWARGRITVKRYD 202
KLDDTEFRN + R I VK Y+
Sbjct: 168 KLDDTEFRNAFGRAYIRVKEYN 189
>gi|219363191|ref|NP_001137034.1| uncharacterized protein LOC100217203 [Zea mays]
gi|52140005|gb|AAU29328.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [Zea mays]
gi|194693886|gb|ACF81027.1| unknown [Zea mays]
gi|194698082|gb|ACF83125.1| unknown [Zea mays]
gi|413955774|gb|AFW88423.1| ASF/SF2-like pre-mRNA splicing factor SRP32 isoform 1 [Zea mays]
gi|413955775|gb|AFW88424.1| ASF/SF2-like pre-mRNA splicing factor SRP32 isoform 2 [Zea mays]
Length = 285
Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 138/202 (68%), Positives = 154/202 (76%), Gaps = 13/202 (6%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R+SRTIYVGNLP DIRE EVEDLFYKYG+I+DI+LK+PPRPP Y FVEFE+ RDAE+
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGKIVDIDLKVPPRPPGYAFVEFEDPRDAEE 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVE AHGG G SS D G G R G+S
Sbjct: 61 AIAGRDGYNFDGHRLRVEAAHGGRGNA-SSHD------------RSSGFGGGGGARRGVS 107
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
RHSEYRV+V GLPSSASWQDLKDHMRKAGDVCF+EV R+ GT G+VDYTN +DMKYAI+
Sbjct: 108 RHSEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIK 167
Query: 181 KLDDTEFRNPWARGRITVKRYD 202
KLDDTEFRN + R I VK Y+
Sbjct: 168 KLDDTEFRNAFGRAYIRVKEYN 189
>gi|147855944|emb|CAN80749.1| hypothetical protein VITISV_040486 [Vitis vinifera]
Length = 282
Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 145/268 (54%), Positives = 171/268 (63%), Gaps = 21/268 (7%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIRE EVEDLFYKYG I+DI+LKIPPRPP Y FVEFE+ARDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVELAHGG G+ S + + + R G+S
Sbjct: 61 AIYGRDGYNFDGHRLRVELAHGGRGQSSSVD---------------HYSSYSSSSRGGLS 105
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
RHSEYRV+V GLP SASWQDLKDHMR+AGDVCF++V R G G+VDYTN +DMKYAIR
Sbjct: 106 RHSEYRVLVTGLPYSASWQDLKDHMRRAGDVCFSQVFRGRGGMTGIVDYTNYDDMKYAIR 165
Query: 181 KLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRSRIVRRNRSKSLERSVSRSVS 240
KLDD+ F+N ++R I V+ Y+ R S RS+S
Sbjct: 166 KLDDSLFKNQFSRAYIRVREYEPRSFSRSPSRSPSVSRSRSPRRSRSYSYSNHSSGRSLS 225
Query: 241 RSMSASPVKSSRARSRSRSVSPDKVRSG 268
RS+ SS+ARSR D++ G
Sbjct: 226 RSV------SSQARSRGVLTGADQLTRG 247
>gi|448878368|gb|AGE46147.1| arginine/serine-rich splicing factor SR30 transcript VI [Sorghum
bicolor]
Length = 237
Score = 257 bits (656), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 151/251 (60%), Positives = 181/251 (72%), Gaps = 18/251 (7%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M+ R TIYVGNLP DIRE EV+DLFYKYGRI++I+LKIPPRPP + FVEFE+ DAED
Sbjct: 1 MTRRNGCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDPHDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVELAHGG RGPSS + + + AG+ G S
Sbjct: 61 AIYGRDGYNFDGHRLRVELAHGG--RGPSSF--------------DRSSSYSSAGQRGAS 104
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
+ S+YRV+V GLPSSASWQDLKDHMR+AGDVCF +V R++ T G+ DYTN EDMK+AIR
Sbjct: 105 KRSDYRVMVTGLPSSASWQDLKDHMRRAGDVCFTDVYREAGATIGIADYTNYEDMKHAIR 164
Query: 181 KLDDTEFRNPWARGRITVKRYD--RSPSRSRSRSRSRSRSRSRIVRRNRSKSLERSVSRS 238
KLDD+EFRN ++R I V+ YD RS S+S+S ++RS SRS V R KS+ RS +RS
Sbjct: 165 KLDDSEFRNAFSRTYIRVREYDARRSRSQSKSPVKARSPSRSPPVSPPRDKSISRSPARS 224
Query: 239 VSRSMSASPVK 249
S S SP K
Sbjct: 225 KSLPRSCSPAK 235
>gi|194696448|gb|ACF82308.1| unknown [Zea mays]
gi|414877280|tpg|DAA54411.1| TPA: ASF/SF2-like pre-mRNA splicing factor SRP30 [Zea mays]
Length = 263
Score = 256 bits (654), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 132/202 (65%), Positives = 155/202 (76%), Gaps = 15/202 (7%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIRE EVEDLFYKYGRILDI+LKIPPRPP Y FVEFE+ RDA+D
Sbjct: 4 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 63
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVELAHGG G+ S + + + A R G+S
Sbjct: 64 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYD---------------RSSSYSSACRGGVS 108
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V R++ T G+VDYTN +DMKYAIR
Sbjct: 109 RRSDFRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKYAIR 168
Query: 181 KLDDTEFRNPWARGRITVKRYD 202
KLDD++FRN ++R I V+ YD
Sbjct: 169 KLDDSQFRNAFSRAYIRVREYD 190
>gi|414877279|tpg|DAA54410.1| TPA: hypothetical protein ZEAMMB73_543160 [Zea mays]
Length = 272
Score = 256 bits (654), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 132/202 (65%), Positives = 155/202 (76%), Gaps = 15/202 (7%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIRE EVEDLFYKYGRILDI+LKIPPRPP Y FVEFE+ RDA+D
Sbjct: 4 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 63
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVELAHGG G+ S + + + A R G+S
Sbjct: 64 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYD---------------RSSSYSSACRGGVS 108
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V R++ T G+VDYTN +DMKYAIR
Sbjct: 109 RRSDFRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKYAIR 168
Query: 181 KLDDTEFRNPWARGRITVKRYD 202
KLDD++FRN ++R I V+ YD
Sbjct: 169 KLDDSQFRNAFSRAYIRVREYD 190
>gi|296089689|emb|CBI39508.3| unnamed protein product [Vitis vinifera]
Length = 249
Score = 256 bits (654), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 144/257 (56%), Positives = 168/257 (65%), Gaps = 21/257 (8%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIRE EVEDLFYKYG I+DI+LKIPPRPP Y FVEFE+ARDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVELAHGG G+ S + + + R G+S
Sbjct: 61 AIYGRDGYNFDGHRLRVELAHGGRGQSSSVD---------------HYSSYSSSSRGGLS 105
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
RHSEYRV+V GLP SASWQDLKDHMR+AGDVCF++V R G G+VDYTN +DMKYAIR
Sbjct: 106 RHSEYRVLVTGLPYSASWQDLKDHMRRAGDVCFSQVFRGRGGMTGIVDYTNYDDMKYAIR 165
Query: 181 KLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRSRIVRRNRSKSLERSVSRSVS 240
KLDD+ F+N ++R I V+ Y+ R S RS+S
Sbjct: 166 KLDDSLFKNQFSRAYIRVREYEPRSFSRSPSRSPSVSRSRSPRRSRSYSYSNHSSGRSLS 225
Query: 241 RSMSASPVKSSRARSRS 257
RS+ SS+ARSRS
Sbjct: 226 RSV------SSQARSRS 236
>gi|52140009|gb|AAU29331.1| ASF/SF2-like pre-mRNA splicing factor SRP30 [Zea mays]
gi|414877275|tpg|DAA54406.1| TPA: ASF/SF2-like pre-mRNA splicing factor SRP30 isoform 1 [Zea
mays]
gi|414877276|tpg|DAA54407.1| TPA: ASF/SF2-like pre-mRNA splicing factor SRP30 isoform 2 [Zea
mays]
Length = 260
Score = 256 bits (654), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 132/202 (65%), Positives = 155/202 (76%), Gaps = 15/202 (7%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIRE EVEDLFYKYGRILDI+LKIPPRPP Y FVEFE+ RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVELAHGG G+ S + + + A R G+S
Sbjct: 61 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYD---------------RSSSYSSACRGGVS 105
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V R++ T G+VDYTN +DMKYAIR
Sbjct: 106 RRSDFRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKYAIR 165
Query: 181 KLDDTEFRNPWARGRITVKRYD 202
KLDD++FRN ++R I V+ YD
Sbjct: 166 KLDDSQFRNAFSRAYIRVREYD 187
>gi|414877278|tpg|DAA54409.1| TPA: hypothetical protein ZEAMMB73_543160 [Zea mays]
Length = 254
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 132/202 (65%), Positives = 155/202 (76%), Gaps = 15/202 (7%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIRE EVEDLFYKYGRILDI+LKIPPRPP Y FVEFE+ RDA+D
Sbjct: 4 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 63
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVELAHGG G+ S + + + A R G+S
Sbjct: 64 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYD---------------RSSSYSSACRGGVS 108
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V R++ T G+VDYTN +DMKYAIR
Sbjct: 109 RRSDFRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKYAIR 168
Query: 181 KLDDTEFRNPWARGRITVKRYD 202
KLDD++FRN ++R I V+ YD
Sbjct: 169 KLDDSQFRNAFSRAYIRVREYD 190
>gi|414877281|tpg|DAA54412.1| TPA: ASF/SF2-like pre-mRNA splicing factor SRP30 [Zea mays]
Length = 244
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 132/202 (65%), Positives = 155/202 (76%), Gaps = 15/202 (7%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIRE EVEDLFYKYGRILDI+LKIPPRPP Y FVEFE+ RDA+D
Sbjct: 4 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 63
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVELAHGG G+ S + + + A R G+S
Sbjct: 64 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYD---------------RSSSYSSACRGGVS 108
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V R++ T G+VDYTN +DMKYAIR
Sbjct: 109 RRSDFRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKYAIR 168
Query: 181 KLDDTEFRNPWARGRITVKRYD 202
KLDD++FRN ++R I V+ YD
Sbjct: 169 KLDDSQFRNAFSRAYIRVREYD 190
>gi|224068334|ref|XP_002302710.1| predicted protein [Populus trichocarpa]
gi|222844436|gb|EEE81983.1| predicted protein [Populus trichocarpa]
Length = 252
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 141/221 (63%), Positives = 159/221 (71%), Gaps = 15/221 (6%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIRE EVEDLFYKYG + I+LKIPPRPP Y FVEFE ARDAED
Sbjct: 1 MSSRASRTLYVGNLPGDIREKEVEDLFYKYGPVAHIDLKIPPRPPGYAFVEFEEARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGY+FDG RLRVELAHGG G S + G GR G S
Sbjct: 61 AIRGRDGYDFDGHRLRVELAHGGRGHSSSDR---------------HSSYSGGRGRGGAS 105
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R SEYRV+V GLPSSASWQDLKDHMR+AGDVCF++V RD GT G+VDYTN EDMKYAI+
Sbjct: 106 RRSEYRVVVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYEDMKYAIK 165
Query: 181 KLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRSR 221
K+DD+EFRN +++ + V+ YD SRS R RS SR R
Sbjct: 166 KIDDSEFRNAFSQAYVRVREYDSKRDSSRSPGRDRSHSRGR 206
>gi|224032703|gb|ACN35427.1| unknown [Zea mays]
gi|414877277|tpg|DAA54408.1| TPA: hypothetical protein ZEAMMB73_543160 [Zea mays]
Length = 234
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 132/202 (65%), Positives = 155/202 (76%), Gaps = 15/202 (7%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIRE EVEDLFYKYGRILDI+LKIPPRPP Y FVEFE+ RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVELAHGG G+ S + + + A R G+S
Sbjct: 61 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYD---------------RSSSYSSACRGGVS 105
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V R++ T G+VDYTN +DMKYAIR
Sbjct: 106 RRSDFRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKYAIR 165
Query: 181 KLDDTEFRNPWARGRITVKRYD 202
KLDD++FRN ++R I V+ YD
Sbjct: 166 KLDDSQFRNAFSRAYIRVREYD 187
>gi|52140006|gb|AAU29329.1| ASF/SF2-like pre-mRNA splicing factor SRP32' [Zea mays]
gi|413955776|gb|AFW88425.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [Zea mays]
Length = 257
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 136/202 (67%), Positives = 152/202 (75%), Gaps = 13/202 (6%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R+SRTIYVGNLP DIRE EVEDLFYKYG+I+DI+LK+PPRPP Y FVEFE+ RDAE+
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGKIVDIDLKVPPRPPGYAFVEFEDPRDAEE 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVE AHGG G S G G R G+S
Sbjct: 61 AIAGRDGYNFDGHRLRVEAAHGGRGNASSHD-------------RSSGFGGGGGARRGVS 107
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
RHSEYRV+V GLPSSASWQDLKDHMRKAGDVCF+EV R+ GT G+VDYTN +DMKYAI+
Sbjct: 108 RHSEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIK 167
Query: 181 KLDDTEFRNPWARGRITVKRYD 202
KLDDTEFRN + R I VK Y+
Sbjct: 168 KLDDTEFRNAFGRAYIRVKEYN 189
>gi|52140010|gb|AAU29332.1| ASF/SF2-like pre-mRNA splicing factor SRP30' [Zea mays]
Length = 241
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 132/202 (65%), Positives = 155/202 (76%), Gaps = 15/202 (7%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIRE EVEDLFYKYGRILDI+LKIPPRPP Y FVEFE+ RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVELAHGG G+ S + + + A R G+S
Sbjct: 61 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYD---------------RSSSYSSACRGGVS 105
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V R++ T G+VDYTN +DMKYAIR
Sbjct: 106 RRSDFRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKYAIR 165
Query: 181 KLDDTEFRNPWARGRITVKRYD 202
KLDD++FRN ++R I V+ YD
Sbjct: 166 KLDDSQFRNAFSRAYIRVREYD 187
>gi|449436495|ref|XP_004136028.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
gi|449498497|ref|XP_004160553.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
Length = 309
Score = 254 bits (648), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 137/210 (65%), Positives = 158/210 (75%), Gaps = 14/210 (6%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIRE EVEDLFYKYGRI I+LK+PPRPP Y FVEFE+A DA+D
Sbjct: 1 MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGY+FDG RLRVELAHGG RG SSS+ R GG GG G +
Sbjct: 61 AIRGRDGYDFDGHRLRVELAHGG--RGHSSSNDRYSSHGGSRGGRGVSRR---------- 108
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
S+YRV+V GLPSSASWQDLKDHMR+AGDVCF++V RD GT G+VDYTN +DMKYAI+
Sbjct: 109 --SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIK 166
Query: 181 KLDDTEFRNPWARGRITVKRYDRSPSRSRS 210
KLDD+EFRN ++R + V+ YD SRS
Sbjct: 167 KLDDSEFRNAFSRAYVRVREYDSKRDLSRS 196
>gi|218196647|gb|EEC79074.1| hypothetical protein OsI_19658 [Oryza sativa Indica Group]
Length = 328
Score = 253 bits (647), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 133/202 (65%), Positives = 156/202 (77%), Gaps = 17/202 (8%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIRE EVEDLFYKYGRI+DI+LKIPPRPP Y FVEFE+ RDA+D
Sbjct: 24 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQD 83
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GR+GY+FDG RLRVELAHG GRGP S DR + + + AGR G +
Sbjct: 84 AIYGRNGYDFDGHRLRVELAHG--GRGP-SFDR--------------SSSYSSAGRRGAA 126
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
+ ++YRV+V GLPSSASWQDLKDHMR+AGDVCF++V R+ T G+VDYTN EDMK AIR
Sbjct: 127 KRTDYRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREGGATIGIVDYTNYEDMKQAIR 186
Query: 181 KLDDTEFRNPWARGRITVKRYD 202
KLDD+EFRN ++R I V+ YD
Sbjct: 187 KLDDSEFRNAFSRAYIRVREYD 208
>gi|115463447|ref|NP_001055323.1| Os05g0364600 [Oryza sativa Japonica Group]
gi|113578874|dbj|BAF17237.1| Os05g0364600 [Oryza sativa Japonica Group]
Length = 294
Score = 253 bits (646), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 133/202 (65%), Positives = 155/202 (76%), Gaps = 17/202 (8%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIRE EVEDLFYKYGRI+DI+LKIPPRPP Y FVEFE+ RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQD 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GR GY+FDG RLRVELAHG GRGP S DR + + + AGR G +
Sbjct: 61 AIYGRHGYDFDGHRLRVELAHG--GRGP-SFDR--------------SSSYSSAGRRGAA 103
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
+ ++YRV+V GLPSSASWQDLKDHMR+AGDVCF++V R+ T G+VDYTN EDMK AIR
Sbjct: 104 KRTDYRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREGGATIGIVDYTNYEDMKQAIR 163
Query: 181 KLDDTEFRNPWARGRITVKRYD 202
KLDD+EFRN ++R I V+ YD
Sbjct: 164 KLDDSEFRNAFSRAYIRVREYD 185
>gi|326495240|dbj|BAJ85716.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326504388|dbj|BAJ91026.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510429|dbj|BAJ87431.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326523109|dbj|BAJ88595.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 294
Score = 253 bits (646), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 140/202 (69%), Positives = 160/202 (79%), Gaps = 7/202 (3%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R+SRTIYVGNLP DIRE VEDLFYKYGRI+DI+LK+PPRPP Y FVEFE+ RDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIRERAVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDPRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
A GRDGYNFDG RLRVE AHGG G G S DR GG GAG G+GR G+S
Sbjct: 61 ACAGRDGYNFDGNRLRVEPAHGGRGSGGPSHDRS-------GSFGGGGGAGGGSGRRGVS 113
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
RH++YRV+V GLPSSASWQDLKDHMR+AGDVCF+EV R+ GT G+ DYTN +DMKYAI+
Sbjct: 114 RHTDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSEVYREGGGTIGIADYTNYDDMKYAIK 173
Query: 181 KLDDTEFRNPWARGRITVKRYD 202
KLDDTEF+N +++G I VK YD
Sbjct: 174 KLDDTEFKNAFSKGYIRVKEYD 195
>gi|449435631|ref|XP_004135598.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
Length = 315
Score = 253 bits (646), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 139/218 (63%), Positives = 153/218 (70%), Gaps = 23/218 (10%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIR EVEDLFYKYG I+DI+LKIPPRPP Y FVEFE+ RDAED
Sbjct: 1 MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGY FDGCRLRVE AHGG G SS DR R G S
Sbjct: 61 AIYGRDGYKFDGCRLRVEFAHGGRGHS-SSVDR--------------------YSRSGSS 99
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R ++ V+V GLPSSASWQDLKDHMR+AGDVCF+EV RD G G+VDYTN +DMKYAIR
Sbjct: 100 R--DFAVLVTGLPSSASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIR 157
Query: 181 KLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRS 218
KLDD+EFRN ++R + VK YD S SRS S RS
Sbjct: 158 KLDDSEFRNAFSRAYVRVKEYDSRHSYSRSPSLDSRRS 195
>gi|225450797|ref|XP_002283865.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Vitis vinifera]
Length = 288
Score = 253 bits (645), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 130/202 (64%), Positives = 151/202 (74%), Gaps = 15/202 (7%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIRE EVEDLFYKYG I+DI+LKIPPRPP Y FVEFE+ARDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVELAHGG G+ S + + + R G+S
Sbjct: 61 AIYGRDGYNFDGHRLRVELAHGGRGQSSSVD---------------HYSSYSSSSRGGLS 105
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
RHSEYRV+V GLP SASWQDLKDHMR+AGDVCF++V R G G+VDYTN +DMKYAIR
Sbjct: 106 RHSEYRVLVTGLPYSASWQDLKDHMRRAGDVCFSQVFRGRGGMTGIVDYTNYDDMKYAIR 165
Query: 181 KLDDTEFRNPWARGRITVKRYD 202
KLDD+ F+N ++R I V+ Y+
Sbjct: 166 KLDDSLFKNQFSRAYIRVREYE 187
>gi|222631305|gb|EEE63437.1| hypothetical protein OsJ_18250 [Oryza sativa Japonica Group]
Length = 305
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 133/202 (65%), Positives = 155/202 (76%), Gaps = 17/202 (8%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIRE EVEDLFYKYGRI+DI+LKIPPRPP Y FVEFE+ RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQD 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GR GY+FDG RLRVELAHG GRGP S DR + + + AGR G +
Sbjct: 61 AIYGRHGYDFDGHRLRVELAHG--GRGP-SFDR--------------SSSYSSAGRRGAA 103
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
+ ++YRV+V GLPSSASWQDLKDHMR+AGDVCF++V R+ T G+VDYTN EDMK AIR
Sbjct: 104 KRTDYRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREGGATIGIVDYTNYEDMKQAIR 163
Query: 181 KLDDTEFRNPWARGRITVKRYD 202
KLDD+EFRN ++R I V+ YD
Sbjct: 164 KLDDSEFRNAFSRAYIRVREYD 185
>gi|357511859|ref|XP_003626218.1| Arginine/serine-rich splicing factor [Medicago truncatula]
gi|355501233|gb|AES82436.1| Arginine/serine-rich splicing factor [Medicago truncatula]
Length = 296
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 135/203 (66%), Positives = 152/203 (74%), Gaps = 16/203 (7%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIR EVEDLFYK+G I+DIELKIPPRPP Y FVEFE+ARDAED
Sbjct: 1 MSRRSSRTIYVGNLPGDIRLREVEDLFYKFGPIVDIELKIPPRPPGYAFVEFEDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIR RDGY FDG RLRVELAHG GRG SSS + +G G+S
Sbjct: 61 AIRYRDGYKFDGFRLRVELAHG--GRGYSSS--------------VDRYSSYSSGSRGVS 104
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
+HSEYRV+V GLP SASWQDLKDHMR+AGDVCF++V RD G G+V+YTN EDMKYAIR
Sbjct: 105 KHSEYRVLVTGLPPSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVEYTNYEDMKYAIR 164
Query: 181 KLDDTEFRNPWARGRITVKRYDR 203
KLDD+EFRN ++ I V+ YDR
Sbjct: 165 KLDDSEFRNAFSWAYIRVREYDR 187
>gi|448878370|gb|AGE46148.1| arginine/serine-rich splicing factor SR27 transcript I [Sorghum
bicolor]
Length = 230
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 132/202 (65%), Positives = 155/202 (76%), Gaps = 15/202 (7%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIRE EVEDLFYKYGRILDI+LKIPPRPP Y FVEFE+ RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVELAHGG G+ S + + + A R G+S
Sbjct: 61 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYD---------------RSSSYSSARRGGVS 105
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V R++ T G+VDYTN +DMKYAIR
Sbjct: 106 RRSDFRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKYAIR 165
Query: 181 KLDDTEFRNPWARGRITVKRYD 202
KLDD++FRN ++R I V+ YD
Sbjct: 166 KLDDSQFRNAFSRAYIRVREYD 187
>gi|326495758|dbj|BAJ85975.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 255
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 132/202 (65%), Positives = 151/202 (74%), Gaps = 15/202 (7%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M R S TIYVGNLP DIRE EVEDLFYKYGRI+DI+LKIPPRPP Y FVEFE+ RDA+D
Sbjct: 1 MGRRNSCTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGY+FDG RLRVELAHGG + S DR + G G G+S
Sbjct: 61 AIYGRDGYDFDGYRLRVELAHGGKAQS-YSYDRPSSFSSGRRG--------------GVS 105
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R SEYRV+V GLPSSASWQDLKDHMR+AGDVCF++V R++ T G+VDYTN +DMKYAIR
Sbjct: 106 RRSEYRVMVDGLPSSASWQDLKDHMRRAGDVCFSDVYREAGATVGIVDYTNYDDMKYAIR 165
Query: 181 KLDDTEFRNPWARGRITVKRYD 202
KLD TEFRN ++R I V+ YD
Sbjct: 166 KLDGTEFRNAFSRAYIRVREYD 187
>gi|357131986|ref|XP_003567614.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Brachypodium
distachyon]
Length = 262
Score = 250 bits (639), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 143/246 (58%), Positives = 163/246 (66%), Gaps = 21/246 (8%)
Query: 8 TIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDG 67
TIYVGNLP DIRE EVEDLFYKYGRI+DI+LKIPPRPP Y FVEFE+ RDA+DAI GRDG
Sbjct: 8 TIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDG 67
Query: 68 YNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRV 127
YNFDG RLRVELAHGG G+ +R Y G G G+SR SEYRV
Sbjct: 68 YNFDGYRLRVELAHGGRGQS-YQYERPRSYSSGRRG--------------GVSRRSEYRV 112
Query: 128 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
+V GLPSSASWQDLKDHMR+AGDVCF++V R++ G+VDYTN +DMKYAIRKLD TEF
Sbjct: 113 LVDGLPSSASWQDLKDHMRRAGDVCFSDVYREAGAIVGIVDYTNYDDMKYAIRKLDGTEF 172
Query: 188 RNPWARGRITVKRYD------RSPSRSRSRSRSRSRSRSRIVRRNRSKSLERSVSRSVSR 241
RN ++R I V+ YD R V R+ ERS+SRS S
Sbjct: 173 RNAFSRSYIRVREYDARSRSRSRSLSYSRSRSCSRSESPRSVSRSPLPVDERSLSRSRSP 232
Query: 242 SMSASP 247
SASP
Sbjct: 233 DSSASP 238
>gi|255542756|ref|XP_002512441.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223548402|gb|EEF49893.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 300
Score = 249 bits (637), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 129/202 (63%), Positives = 151/202 (74%), Gaps = 14/202 (6%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIR+ EV+DLFYKYG I++++LKIPPRPP Y FVEFE+ARDAED
Sbjct: 38 MSSRASRTLYVGNLPGDIRQREVKDLFYKYGPIVEVDLKIPPRPPGYAFVEFEDARDAED 97
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGYNFDGCRLRVELAHGG RR G G G S
Sbjct: 98 AIRGRDGYNFDGCRLRVELAHGG---------RRHSSPGDRYSSYSGRSGSRGP-----S 143
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R S+YRV+V GLPSSASWQDLKDHMR+AGDVCF++V RD G G+VDYTN +DMK+AI+
Sbjct: 144 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTNYDDMKHAIK 203
Query: 181 KLDDTEFRNPWARGRITVKRYD 202
KLDD+EFRN ++R + V+ YD
Sbjct: 204 KLDDSEFRNAFSRSYVRVREYD 225
>gi|255646543|gb|ACU23746.1| unknown [Glycine max]
Length = 310
Score = 249 bits (637), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 147/201 (73%), Gaps = 14/201 (6%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIRE EVEDLF KYG I I+LK+PPRPP Y FVEFE+A+DAED
Sbjct: 1 MSRRSSRTVYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGY+FDG RLRVE AHGG G SS DR + G G +
Sbjct: 61 AIRGRDGYDFDGHRLRVEPAHGGRGHS-SSKDRHNSHSNGRGGRGVSRRS---------- 109
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
EYRV+V GLPSSASWQDLKDHMRKAGDVCF++V D GT G+VDYTN +DMKYAI+
Sbjct: 110 ---EYRVLVTGLPSSASWQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIK 166
Query: 181 KLDDTEFRNPWARGRITVKRY 201
KLDD+EFRN +++G + V+ Y
Sbjct: 167 KLDDSEFRNAFSKGYVRVREY 187
>gi|356572736|ref|XP_003554522.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
Length = 309
Score = 249 bits (636), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 147/201 (73%), Gaps = 14/201 (6%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIRE EVEDLF KYG I I+LK+PPRPP Y FVEFE+A+DAED
Sbjct: 1 MSRRSSRTVYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGY+FDG RLRVE AHGG G SS DR + G G +
Sbjct: 61 AIRGRDGYDFDGHRLRVEPAHGGRGHS-SSKDRHNSHSNGRGGRGVSRRS---------- 109
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
EYRV+V GLPSSASWQDLKDHMRKAGDVCF++V D GT G+VDYTN +DMKYAI+
Sbjct: 110 ---EYRVLVTGLPSSASWQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIK 166
Query: 181 KLDDTEFRNPWARGRITVKRY 201
KLDD+EFRN +++G + V+ Y
Sbjct: 167 KLDDSEFRNAFSKGYVRVREY 187
>gi|5815235|gb|AAD52609.1|AF173640_1 splicing factor SR1 [Arabidopsis thaliana]
Length = 307
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 139/212 (65%), Positives = 158/212 (74%), Gaps = 5/212 (2%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIRE EVEDLF KYG ++ I+LK+PPRPP Y FVEF++ARDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGY+FDG RLRVELAHG GR S R GGG GG G G G S
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHG--GRRSSDDTRGSFNGGGRGGGRGRGDGRGDGGSRGPS 118
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R SE+RV+V GLPSSASWQDLKDHMRK GDVCF++V RD+ GT GVVDYT EDMKYA++
Sbjct: 119 RRSEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALK 178
Query: 181 KLDDTEFRNPWARGRITVKRYDRSPSRSRSRS 212
KLDDTEFRN ++ G + V+ YD SR SRS
Sbjct: 179 KLDDTEFRNAFSNGYVRVREYD---SRKDSRS 207
>gi|357441753|ref|XP_003591154.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355480202|gb|AES61405.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 322
Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 154/263 (58%), Positives = 181/263 (68%), Gaps = 16/263 (6%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGR SRT+YVGNLP DIR EVEDLFYKYG I+DI+LKIPP+PP Y FVEFE+ARDA+D
Sbjct: 32 MSGRSSRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQD 91
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI RDGY+FDG RL VELAHGG RG SSS R G +G G +S
Sbjct: 92 AIYYRDGYDFDGYRLLVELAHGG--RGSSSSVDRYSRHSGRSGSRG------------VS 137
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R S+YRV+V GLP SASWQDLKDHMRKAG VCF++V R+ G G+VDYTN +D+KYAIR
Sbjct: 138 RRSDYRVLVTGLPPSASWQDLKDHMRKAGHVCFSQVFRERGGLTGIVDYTNYDDVKYAIR 197
Query: 181 KLDDTEFRNPWARGRITVKRY--DRSPSRSRSRSRSRSRSRSRIVRRNRSKSLERSVSRS 238
KLDD+EFRN ++R I V+ Y S S SR RS SRSRS V R+RS SL S S
Sbjct: 198 KLDDSEFRNAFSRSYIRVREYDRSHSRSPSRDSRRSYSRSRSPYVSRSRSCSLSHSYSGR 257
Query: 239 VSRSMSASPVKSSRARSRSRSVS 261
R + VK S+S+++S
Sbjct: 258 SRRFTLVASVKFDLFVSKSKTLS 280
>gi|357441749|ref|XP_003591152.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355480200|gb|AES61403.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 334
Score = 247 bits (631), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 154/263 (58%), Positives = 181/263 (68%), Gaps = 16/263 (6%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGR SRT+YVGNLP DIR EVEDLFYKYG I+DI+LKIPP+PP Y FVEFE+ARDA+D
Sbjct: 32 MSGRSSRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQD 91
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI RDGY+FDG RL VELAHGG RG SSS R G +G G +S
Sbjct: 92 AIYYRDGYDFDGYRLLVELAHGG--RGSSSSVDRYSRHSGRSGSRG------------VS 137
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R S+YRV+V GLP SASWQDLKDHMRKAG VCF++V R+ G G+VDYTN +D+KYAIR
Sbjct: 138 RRSDYRVLVTGLPPSASWQDLKDHMRKAGHVCFSQVFRERGGLTGIVDYTNYDDVKYAIR 197
Query: 181 KLDDTEFRNPWARGRITVKRY--DRSPSRSRSRSRSRSRSRSRIVRRNRSKSLERSVSRS 238
KLDD+EFRN ++R I V+ Y S S SR RS SRSRS V R+RS SL S S
Sbjct: 198 KLDDSEFRNAFSRSYIRVREYDRSHSRSPSRDSRRSYSRSRSPYVSRSRSCSLSHSYSGR 257
Query: 239 VSRSMSASPVKSSRARSRSRSVS 261
R + VK S+S+++S
Sbjct: 258 SRRFTLVASVKFDLFVSKSKTLS 280
>gi|357441755|ref|XP_003591155.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355480203|gb|AES61406.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 316
Score = 247 bits (630), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 154/263 (58%), Positives = 181/263 (68%), Gaps = 16/263 (6%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGR SRT+YVGNLP DIR EVEDLFYKYG I+DI+LKIPP+PP Y FVEFE+ARDA+D
Sbjct: 32 MSGRSSRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQD 91
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI RDGY+FDG RL VELAHGG RG SSS R G +G G +S
Sbjct: 92 AIYYRDGYDFDGYRLLVELAHGG--RGSSSSVDRYSRHSGRSGSRG------------VS 137
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R S+YRV+V GLP SASWQDLKDHMRKAG VCF++V R+ G G+VDYTN +D+KYAIR
Sbjct: 138 RRSDYRVLVTGLPPSASWQDLKDHMRKAGHVCFSQVFRERGGLTGIVDYTNYDDVKYAIR 197
Query: 181 KLDDTEFRNPWARGRITVKRY--DRSPSRSRSRSRSRSRSRSRIVRRNRSKSLERSVSRS 238
KLDD+EFRN ++R I V+ Y S S SR RS SRSRS V R+RS SL S S
Sbjct: 198 KLDDSEFRNAFSRSYIRVREYDRSHSRSPSRDSRRSYSRSRSPYVSRSRSCSLSHSYSGR 257
Query: 239 VSRSMSASPVKSSRARSRSRSVS 261
R + VK S+S+++S
Sbjct: 258 SRRFTLVASVKFDLFVSKSKTLS 280
>gi|52140012|gb|AAU29333.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays]
gi|194698470|gb|ACF83319.1| unknown [Zea mays]
gi|413944987|gb|AFW77636.1| pre-mRNA-splicing factor SF2 [Zea mays]
Length = 276
Score = 247 bits (630), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 125/202 (61%), Positives = 150/202 (74%), Gaps = 16/202 (7%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M+ R TIYVGNLP DIRE EV+DLFYKYGRI++I+LKIPPRPP + FVEFE+ARDAED
Sbjct: 1 MTRRNGCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVELAHGG G + + + AG+ G S
Sbjct: 61 AIYGRDGYNFDGHRLRVELAHGGRG----------------TSSFDRSSSYSSAGQRGAS 104
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
+ S+YRV+V GLPSSASWQDLKDHMR+AGDVCF +V R++ T G+ DYTN EDMK+AIR
Sbjct: 105 KRSDYRVMVTGLPSSASWQDLKDHMRRAGDVCFTDVYREAGATIGIADYTNYEDMKHAIR 164
Query: 181 KLDDTEFRNPWARGRITVKRYD 202
KLDD+EFRN ++R + V+ YD
Sbjct: 165 KLDDSEFRNAFSRTYVRVREYD 186
>gi|217073712|gb|ACJ85216.1| unknown [Medicago truncatula]
Length = 246
Score = 246 bits (629), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 158/267 (59%), Positives = 184/267 (68%), Gaps = 23/267 (8%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGR SRT+YVGNLP DIR EVEDLFYKYG I+DI+LKIPP+PP Y FVEFE+ARDA+D
Sbjct: 1 MSGRSSRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQD 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI RDGY+FDG RL VELAHGG RG SSS R G +G G +S
Sbjct: 61 AIYYRDGYDFDGYRLLVELAHGG--RGSSSSVDRYSRHSGRSGSRG------------VS 106
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R S+YRV+V GLP SASWQDLKDHMRKAG VCF++V R+ G G+VDYTN +D+KYAIR
Sbjct: 107 RRSDYRVLVTGLPPSASWQDLKDHMRKAGHVCFSQVFRERGGLTGIVDYTNYDDVKYAIR 166
Query: 181 KLDDTEFRNPWARGRITVKRY--DRSPSRSRSRSRSRSRSRSRIVRRNRSKSLERSVSRS 238
KLDD+EFRN ++R I V+ Y S S SR RS SRSRS V R+RS SL S S
Sbjct: 167 KLDDSEFRNAFSRSYIRVREYDRSHSRSPSRDSRRSYSRSRSPYVSRSRSCSLSHSYS-- 224
Query: 239 VSRSMSASPVKSSRARSRSRSVSPDKV 265
RS S SP +A+ RS+ P K+
Sbjct: 225 -GRSRSLSP----KAKHSRRSLFPFKM 246
>gi|5815239|gb|AAD52613.1| splicing factor SR1E [Arabidopsis thaliana]
Length = 270
Score = 246 bits (629), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 139/212 (65%), Positives = 158/212 (74%), Gaps = 5/212 (2%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIRE EVEDLF KYG ++ I+LK+PPRPP Y FVEF++ARDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGY+FDG RLRVELAHG GR S R GGG GG G G G S
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHG--GRRSSDDTRGSFNGGGRGGGRGRGDGRGDGGSRGPS 118
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R SE+RV+V GLPSSASWQDLKDHMRK GDVCF++V RD+ GT GVVDYT EDMKYA++
Sbjct: 119 RRSEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALK 178
Query: 181 KLDDTEFRNPWARGRITVKRYDRSPSRSRSRS 212
KLDDTEFRN ++ G + V+ YD SR SRS
Sbjct: 179 KLDDTEFRNAFSNGYVRVREYD---SRKDSRS 207
>gi|225437350|ref|XP_002265998.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 1 [Vitis
vinifera]
gi|359480272|ref|XP_003632425.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 2 [Vitis
vinifera]
Length = 296
Score = 246 bits (629), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 135/202 (66%), Positives = 152/202 (75%), Gaps = 14/202 (6%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIRE EVEDLFYKYG I I+LKIPPRPP Y FVEFE +RDAED
Sbjct: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEESRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGY+FDG RLRVELAHGG G SS DR + + GR G S
Sbjct: 61 AIRGRDGYDFDGHRLRVELAHGGRGHS-SSIDRH-------------SHSSGRGGRGGAS 106
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R SEYRV+V GLPSSASWQDLKDHMR+AGDVCF++V D GT G+VDYTN +DMK+AIR
Sbjct: 107 RRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFHDGGGTVGIVDYTNYDDMKFAIR 166
Query: 181 KLDDTEFRNPWARGRITVKRYD 202
KLDD+EFRN ++R + VK YD
Sbjct: 167 KLDDSEFRNAFSRAYVRVKEYD 188
>gi|30678391|ref|NP_850933.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|30678398|ref|NP_563665.3| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|3929368|sp|O22315.1|SFRS1_ARATH RecName: Full=Pre-mRNA-splicing factor SF2; AltName: Full=SR1
protein
gi|6056417|gb|AAF02881.1|AC009525_15 alternative splicing factor SF2a [Arabidopsis thaliana]
gi|2443472|gb|AAB71385.1| ASF/SF2 homolog [Arabidopsis thaliana]
gi|21554051|gb|AAM63132.1| SF2/ASF-like splicing modulator Srp30, putative [Arabidopsis
thaliana]
gi|26451794|dbj|BAC42991.1| putative ribonucleoprotein SF-2 [Arabidopsis thaliana]
gi|332189356|gb|AEE27477.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|332189358|gb|AEE27479.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
Length = 303
Score = 246 bits (629), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 138/212 (65%), Positives = 157/212 (74%), Gaps = 9/212 (4%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIRE EVEDLF KYG ++ I+LK+PPRPP Y FVEF++ARDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGY+FDG RLRVELAHGG SSD G GG GG G G S
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHGGR----RSSD--DTRGSFNGGGRGGGRGRGDGGSRGPS 114
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R SE+RV+V GLPSSASWQDLKDHMRK GDVCF++V RD+ GT GVVDYT EDMKYA++
Sbjct: 115 RRSEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALK 174
Query: 181 KLDDTEFRNPWARGRITVKRYDRSPSRSRSRS 212
KLDDTEFRN ++ G + V+ YD SR SRS
Sbjct: 175 KLDDTEFRNAFSNGYVRVREYD---SRKDSRS 203
>gi|357441751|ref|XP_003591153.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355480201|gb|AES61404.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 290
Score = 246 bits (628), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 157/260 (60%), Positives = 181/260 (69%), Gaps = 17/260 (6%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGR SRT+YVGNLP DIR EVEDLFYKYG I+DI+LKIPP+PP Y FVEFE+ARDA+D
Sbjct: 32 MSGRSSRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQD 91
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI RDGY+FDG RL VELAHGG RG SSS R G +G G +S
Sbjct: 92 AIYYRDGYDFDGYRLLVELAHGG--RGSSSSVDRYSRHSGRSGSRG------------VS 137
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R S+YRV+V GLP SASWQDLKDHMRKAG VCF++V R+ G G+VDYTN +D+KYAIR
Sbjct: 138 RRSDYRVLVTGLPPSASWQDLKDHMRKAGHVCFSQVFRERGGLTGIVDYTNYDDVKYAIR 197
Query: 181 KLDDTEFRNPWARGRITVKRY--DRSPSRSRSRSRSRSRSRSRIVRRNRSKSLERSVSRS 238
KLDD+EFRN ++R I V+ Y S S SR RS SRSRS V R+RS SL S S
Sbjct: 198 KLDDSEFRNAFSRSYIRVREYDRSHSRSPSRDSRRSYSRSRSPYVSRSRSCSLSHSYS-G 256
Query: 239 VSRSMSASPVKSSRARSRSR 258
SRS+S S R+ S SR
Sbjct: 257 RSRSLSPKAKHSRRSFSLSR 276
>gi|357516353|ref|XP_003628465.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355522487|gb|AET02941.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 326
Score = 246 bits (628), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 130/212 (61%), Positives = 149/212 (70%), Gaps = 19/212 (8%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS SRT+YVGNLP DIRE EVEDLF KYG I I+LK+PPRPP Y FVEFE+ +DAED
Sbjct: 27 MSRHSSRTVYVGNLPGDIREREVEDLFMKYGHITHIDLKVPPRPPGYAFVEFEDVQDAED 86
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGY+FDG RLRVE AHGG G SS DR + G G +
Sbjct: 87 AIRGRDGYDFDGHRLRVEAAHGGRGNS-SSRDRYSSHSNGRGGRGVSRRS---------- 135
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
EYRVIV GLPSSASWQDLKDHMRKAGDVCF++V D GT G+VDYTN +DMKYAI+
Sbjct: 136 ---EYRVIVNGLPSSASWQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIK 192
Query: 181 KLDDTEFRNPWARGRITVKRYD-----RSPSR 207
KLDD+EFRN +++ + V+ YD RSP R
Sbjct: 193 KLDDSEFRNAFSKSYVRVREYDSRRDSRSPGR 224
>gi|5815237|gb|AAD52611.1| splicing factor SR1C [Arabidopsis thaliana]
Length = 276
Score = 246 bits (628), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 139/212 (65%), Positives = 158/212 (74%), Gaps = 5/212 (2%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIRE EVEDLF KYG ++ I+LK+PPRPP Y FVEF++ARDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGY+FDG RLRVELAHG GR S R GGG GG G G G S
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHG--GRRSSDDTRGSFNGGGRGGGRGRGDGRGDGGSRGPS 118
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R SE+RV+V GLPSSASWQDLKDHMRK GDVCF++V RD+ GT GVVDYT EDMKYA++
Sbjct: 119 RRSEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALK 178
Query: 181 KLDDTEFRNPWARGRITVKRYDRSPSRSRSRS 212
KLDDTEFRN ++ G + V+ YD SR SRS
Sbjct: 179 KLDDTEFRNAFSNGYVRVREYD---SRKDSRS 207
>gi|5815236|gb|AAD52610.1| splicing factor SR1B [Arabidopsis thaliana]
Length = 289
Score = 246 bits (627), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 139/212 (65%), Positives = 158/212 (74%), Gaps = 5/212 (2%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIRE EVEDLF KYG ++ I+LK+PPRPP Y FVEF++ARDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGY+FDG RLRVELAHG GR S R GGG GG G G G S
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHG--GRRSSDDTRGSFNGGGRGGGRGRGDGRGDGGSRGPS 118
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R SE+RV+V GLPSSASWQDLKDHMRK GDVCF++V RD+ GT GVVDYT EDMKYA++
Sbjct: 119 RRSEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALK 178
Query: 181 KLDDTEFRNPWARGRITVKRYDRSPSRSRSRS 212
KLDDTEFRN ++ G + V+ YD SR SRS
Sbjct: 179 KLDDTEFRNAFSNGYVRVREYD---SRKDSRS 207
>gi|297849206|ref|XP_002892484.1| hypothetical protein ARALYDRAFT_470995 [Arabidopsis lyrata subsp.
lyrata]
gi|297338326|gb|EFH68743.1| hypothetical protein ARALYDRAFT_470995 [Arabidopsis lyrata subsp.
lyrata]
Length = 265
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 135/212 (63%), Positives = 151/212 (71%), Gaps = 19/212 (8%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R++RTIYVGNLP DIR EVEDLFYKYG I+DI+LKIPPRPP Y FVEFE+ RDA+D
Sbjct: 1 MSSRWNRTIYVGNLPGDIRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGY+FDGCRLRVE+AHGG S Y G A S
Sbjct: 61 AIYGRDGYDFDGCRLRVEIAHGGRRGSSSVDRYSSSYTGSRAP----------------S 104
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R S YRV+V GLP SASWQDLKDHMRKAGDVCF+EV RD GVVDY+N +DMKYAIR
Sbjct: 105 RRSAYRVLVTGLPPSASWQDLKDHMRKAGDVCFSEVFRDRGRMSGVVDYSNYDDMKYAIR 164
Query: 181 KLDDTEFRNPWARGRITVKRYDRSPSRSRSRS 212
KLDDTEFRN ++R I V+ Y+ SRS SRS
Sbjct: 165 KLDDTEFRNAFSRAYIRVREYE---SRSVSRS 193
>gi|388515137|gb|AFK45630.1| unknown [Medicago truncatula]
Length = 259
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 156/260 (60%), Positives = 181/260 (69%), Gaps = 17/260 (6%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGR SRT+YVGNLP DIR EVEDLFYKYG I+DI+LKIPP+PP Y FVEFE+ARDA+D
Sbjct: 1 MSGRSSRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQD 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI RDGY+FDG RL VELAHGG G SS DR + G +G G+S
Sbjct: 61 AIYYRDGYDFDGYRLLVELAHGGRG-SSSSVDRYSRHSGR-------------SGSRGVS 106
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R S+YRV+V GLP SASWQDLKDHMRKAG VCF++V R+ G G+VDYTN +D+KYAIR
Sbjct: 107 RRSDYRVLVTGLPPSASWQDLKDHMRKAGHVCFSQVFRERGGLTGIVDYTNYDDVKYAIR 166
Query: 181 KLDDTEFRNPWARGRITVKRY--DRSPSRSRSRSRSRSRSRSRIVRRNRSKSLERSVSRS 238
KLDD+EFRN ++R I V+ Y S S SR RS SRSRS V R+RS SL S S
Sbjct: 167 KLDDSEFRNAFSRSYIRVREYDRSHSRSPSRDSRRSYSRSRSPYVSRSRSCSLSHSYS-G 225
Query: 239 VSRSMSASPVKSSRARSRSR 258
SRS+S S R+ S SR
Sbjct: 226 RSRSLSPKAKHSRRSFSLSR 245
>gi|52140013|gb|AAU29334.1| ASF/SF2-like pre-mRNA splicing factor SRP31' [Zea mays]
gi|413944989|gb|AFW77638.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays]
Length = 253
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 125/202 (61%), Positives = 150/202 (74%), Gaps = 16/202 (7%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M+ R TIYVGNLP DIRE EV+DLFYKYGRI++I+LKIPPRPP + FVEFE+ARDAED
Sbjct: 1 MTRRNGCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVELAHGG G + + + AG+ G S
Sbjct: 61 AIYGRDGYNFDGHRLRVELAHGGRGTSSFDR----------------SSSYSSAGQRGAS 104
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
+ S+YRV+V GLPSSASWQDLKDHMR+AGDVCF +V R++ T G+ DYTN EDMK+AIR
Sbjct: 105 KRSDYRVMVTGLPSSASWQDLKDHMRRAGDVCFTDVYREAGATIGIADYTNYEDMKHAIR 164
Query: 181 KLDDTEFRNPWARGRITVKRYD 202
KLDD+EFRN ++R + V+ YD
Sbjct: 165 KLDDSEFRNAFSRTYVRVREYD 186
>gi|297843082|ref|XP_002889422.1| hypothetical protein ARALYDRAFT_311385 [Arabidopsis lyrata subsp.
lyrata]
gi|297335264|gb|EFH65681.1| hypothetical protein ARALYDRAFT_311385 [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 134/202 (66%), Positives = 153/202 (75%), Gaps = 2/202 (0%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIRE EVEDLF KYG ++ I+LK+PPRPP Y FVEF++ARDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI+GRDGY+FDG RLRVELAHG GR S R GGG GG G G G S
Sbjct: 61 AIQGRDGYDFDGHRLRVELAHG--GRRSSDDTRGSFNGGGRGGGRGRGDGRGDGGSRGPS 118
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R SE+RV+V GLPSSASWQDLKDHMRK GDVCF++V RD GT GVVDYT EDMKYA++
Sbjct: 119 RRSEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDGRGTTGVVDYTCYEDMKYAVK 178
Query: 181 KLDDTEFRNPWARGRITVKRYD 202
KLDDTEFRN ++ G + V+ YD
Sbjct: 179 KLDDTEFRNAFSHGYVRVREYD 200
>gi|302804889|ref|XP_002984196.1| hypothetical protein SELMODRAFT_119951 [Selaginella moellendorffii]
gi|300148045|gb|EFJ14706.1| hypothetical protein SELMODRAFT_119951 [Selaginella moellendorffii]
Length = 298
Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 134/200 (67%), Positives = 153/200 (76%), Gaps = 11/200 (5%)
Query: 4 RFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIR 63
R SRTIYVGNLP D+RE E++DLFYKYGRILDI+LK+PPRPP Y F+EF++ RDAEDAI+
Sbjct: 3 RSSRTIYVGNLPGDVRESEIDDLFYKYGRILDIDLKLPPRPPGYAFIEFDDPRDAEDAIK 62
Query: 64 GRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGG----GGAGGAGGAGAGAGAGRFGI 119
RDGY FDG RLRVE AH G GRG S YGG G GG G G G G G+
Sbjct: 63 ARDGYVFDGHRLRVEFAHSG-GRGHPS------YGGDRHSNSYRGGGGGGGGGGGGGRGV 115
Query: 120 SRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAI 179
SR SEYRV+V GLPSSASWQDLKDHMR AGDVCFA+V R+S GT G+VD+TN +DMK AI
Sbjct: 116 SRRSEYRVVVTGLPSSASWQDLKDHMRTAGDVCFAQVFRESNGTRGIVDFTNYDDMKNAI 175
Query: 180 RKLDDTEFRNPWARGRITVK 199
RKLDDTEFRNP++ I V+
Sbjct: 176 RKLDDTEFRNPFSHSYIRVR 195
>gi|297743877|emb|CBI36847.3| unnamed protein product [Vitis vinifera]
Length = 264
Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 135/202 (66%), Positives = 152/202 (75%), Gaps = 14/202 (6%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIRE EVEDLFYKYG I I+LKIPPRPP Y FVEFE +RDAED
Sbjct: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEESRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGY+FDG RLRVELAHGG G SS DR + + GR G S
Sbjct: 61 AIRGRDGYDFDGHRLRVELAHGGRGHS-SSIDRH-------------SHSSGRGGRGGAS 106
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R SEYRV+V GLPSSASWQDLKDHMR+AGDVCF++V D GT G+VDYTN +DMK+AIR
Sbjct: 107 RRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFHDGGGTVGIVDYTNYDDMKFAIR 166
Query: 181 KLDDTEFRNPWARGRITVKRYD 202
KLDD+EFRN ++R + VK YD
Sbjct: 167 KLDDSEFRNAFSRAYVRVKEYD 188
>gi|255564164|ref|XP_002523079.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223537641|gb|EEF39264.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 292
Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 132/202 (65%), Positives = 149/202 (73%), Gaps = 15/202 (7%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIRE EVEDLFYKYG I I+LKIPPRPP Y FVEFE ARDAED
Sbjct: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGY+FDG +LRVELAHGG G S + G G+S
Sbjct: 61 AIRGRDGYDFDGHQLRVELAHGGRGHSSSDR---------------HSSHSGGGRGRGVS 105
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R SEYRV+V GLPSSASWQDLKDHMR+AGDVCF++V RD GT G+VDYTN EDMK+AI+
Sbjct: 106 RRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYEDMKHAIK 165
Query: 181 KLDDTEFRNPWARGRITVKRYD 202
KLDD+EFRN ++R + VK YD
Sbjct: 166 KLDDSEFRNAFSRAYVRVKEYD 187
>gi|5815238|gb|AAD52612.1| splicing factor SR1D [Arabidopsis thaliana]
Length = 261
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 134/202 (66%), Positives = 153/202 (75%), Gaps = 2/202 (0%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIRE EVEDLF KYG ++ I+LK+PPRPP Y FVEF++ARDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGY+FDG RLRVELAHGG R S R GGG GG G G G S
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHGG--RRSSDDTRGSFNGGGRGGGRGRGDGRGDGGSRGPS 118
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R SE+RV+V GLPSSASWQDLKDHMRK GDVCF++V RD+ GT GVVDYT EDMKYA++
Sbjct: 119 RRSEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALK 178
Query: 181 KLDDTEFRNPWARGRITVKRYD 202
KLDDTEFRN ++ G + V+ YD
Sbjct: 179 KLDDTEFRNAFSNGYVRVREYD 200
>gi|448878366|gb|AGE46146.1| arginine/serine-rich splicing factor SR30 transcript V [Sorghum
bicolor]
Length = 278
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 128/202 (63%), Positives = 152/202 (75%), Gaps = 16/202 (7%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M+ R TIYVGNLP DIRE EV+DLFYKYGRI++I+LKIPPRPP + FVEFE+ DAED
Sbjct: 1 MTRRNGCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDPHDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVELAHGG RGPSS + + + AG+ G S
Sbjct: 61 AIYGRDGYNFDGHRLRVELAHGG--RGPSSF--------------DRSSSYSSAGQRGAS 104
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
+ S+YRV+V GLPSSASWQDLKDHMR+AGDVCF +V R++ T G+ DYTN EDMK+AIR
Sbjct: 105 KRSDYRVMVTGLPSSASWQDLKDHMRRAGDVCFTDVYREAGATIGIADYTNYEDMKHAIR 164
Query: 181 KLDDTEFRNPWARGRITVKRYD 202
KLDD+EFRN ++R I V+ YD
Sbjct: 165 KLDDSEFRNAFSRTYIRVREYD 186
>gi|2443473|gb|AAB71386.1| ASF/SF2 homolog [Arabidopsis thaliana]
Length = 272
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 138/212 (65%), Positives = 157/212 (74%), Gaps = 9/212 (4%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIRE EVEDLF KYG ++ I+LK+PPRPP Y FVEF++ARDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGY+FDG RLRVELAHGG SSD G GG GG G G S
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHGGR----RSSD--DTRGSFNGGGRGGGRGRGDGGSRGPS 114
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R SE+RV+V GLPSSASWQDLKDHMRK GDVCF++V RD+ GT GVVDYT EDMKYA++
Sbjct: 115 RRSEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALK 174
Query: 181 KLDDTEFRNPWARGRITVKRYDRSPSRSRSRS 212
KLDDTEFRN ++ G + V+ YD SR SRS
Sbjct: 175 KLDDTEFRNAFSNGYVRVREYD---SRKDSRS 203
>gi|147853033|emb|CAN81258.1| hypothetical protein VITISV_000965 [Vitis vinifera]
Length = 720
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 135/202 (66%), Positives = 152/202 (75%), Gaps = 14/202 (6%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIRE EVEDLFYKYG I I+LKIPPRPP Y FVEFE +RDAED
Sbjct: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEESRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGY+FDG RLRVELAHGG G SS DR + + GR G S
Sbjct: 61 AIRGRDGYDFDGHRLRVELAHGGRGHS-SSIDRH-------------SHSSGRGGRGGAS 106
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R SEYRV+V GLPSSASWQDLKDHMR+AGDVCF++V D GT G+VDYTN +DMK+AIR
Sbjct: 107 RRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFHDGGGTVGIVDYTNYDDMKFAIR 166
Query: 181 KLDDTEFRNPWARGRITVKRYD 202
KLDD+EFRN ++R + VK YD
Sbjct: 167 KLDDSEFRNAFSRAYVRVKEYD 188
>gi|42561847|ref|NP_172386.3| splicing factor, arginine/serine-rich 1/9 [Arabidopsis thaliana]
gi|4775270|emb|CAB42557.1| SF2/ASF-like splicing modulator Srp30 [Arabidopsis thaliana]
gi|23297699|gb|AAN13011.1| putative SF2/ASF splicing modulator Srp30 [Arabidopsis thaliana]
gi|332190279|gb|AEE28400.1| splicing factor, arginine/serine-rich 1/9 [Arabidopsis thaliana]
Length = 268
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 131/212 (61%), Positives = 153/212 (72%), Gaps = 19/212 (8%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R++RTIYVGNLP DIR+ EVEDLFYKYG I+DI+LKIPPRPP Y FVEFE+ RDA+D
Sbjct: 1 MSSRWNRTIYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGY+FDGCRLRVE+AHGG PS + + + S
Sbjct: 61 AIYGRDGYDFDGCRLRVEIAHGGRRFSPSVD----------------RYSSSYSASRAPS 104
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R S+YRV+V GLP SASWQDLKDHMRKAGDVCF+EV D +G GVVDY+N +DMKYAIR
Sbjct: 105 RRSDYRVLVTGLPPSASWQDLKDHMRKAGDVCFSEVFPDRKGMSGVVDYSNYDDMKYAIR 164
Query: 181 KLDDTEFRNPWARGRITVKRYDRSPSRSRSRS 212
KLD TEFRN ++ I V+ Y+ SRS SRS
Sbjct: 165 KLDATEFRNAFSSAYIRVREYE---SRSVSRS 193
>gi|224123080|ref|XP_002318990.1| predicted protein [Populus trichocarpa]
gi|222857366|gb|EEE94913.1| predicted protein [Populus trichocarpa]
Length = 224
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 129/196 (65%), Positives = 147/196 (75%), Gaps = 14/196 (7%)
Query: 4 RFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIR 63
R SRT+YVGNLP DIR EVEDLFYKYG I+DI+LKIPPRPP Y FVEFE ARDAEDAIR
Sbjct: 3 RASRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEEARDAEDAIR 62
Query: 64 GRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHS 123
GRDGYNFDGCRLRVELAHGG R S D + +G G S+ S
Sbjct: 63 GRDGYNFDGCRLRVELAHGGR-RHSSPVDH-------------YSSYSGSSGSRGPSKRS 108
Query: 124 EYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLD 183
+YRV+V GLPSSASWQDLKDHMR+AGDVCF++V RD G G+VDYTN +DMKYAI+KLD
Sbjct: 109 DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTNYDDMKYAIKKLD 168
Query: 184 DTEFRNPWARGRITVK 199
D+EFRN ++R I V+
Sbjct: 169 DSEFRNAFSRAYIRVR 184
>gi|357511267|ref|XP_003625922.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355500937|gb|AES82140.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 401
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 130/212 (61%), Positives = 149/212 (70%), Gaps = 19/212 (8%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS SRT+YVGNLP DIRE EVEDLF KYG I I+LK+PPRPP Y FVEFE+ +DAED
Sbjct: 102 MSRHSSRTVYVGNLPGDIREREVEDLFMKYGHITHIDLKVPPRPPGYAFVEFEDVQDAED 161
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGY+FDG RLRVE AHGG G SS DR + G G +
Sbjct: 162 AIRGRDGYDFDGHRLRVEAAHGGRGNS-SSRDRYSSHSNGRGGRGVSRRS---------- 210
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
EYRVIV GLPSSASWQDLKDHMRKAGDVCF++V D GT G+VDYTN +DMKYAI+
Sbjct: 211 ---EYRVIVNGLPSSASWQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIK 267
Query: 181 KLDDTEFRNPWARGRITVKRYD-----RSPSR 207
KLDD+EFRN +++ + V+ YD RSP R
Sbjct: 268 KLDDSEFRNAFSKSYVRVREYDSRRDSRSPGR 299
>gi|30678395|ref|NP_850934.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|22135918|gb|AAM91541.1| SF2/ASF-like splicing modulator Srp30, putative [Arabidopsis
thaliana]
gi|30023782|gb|AAP13424.1| At1g02840 [Arabidopsis thaliana]
gi|332189357|gb|AEE27478.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
Length = 285
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 138/212 (65%), Positives = 157/212 (74%), Gaps = 9/212 (4%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIRE EVEDLF KYG ++ I+LK+PPRPP Y FVEF++ARDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGY+FDG RLRVELAHGG SSD G GG GG G G S
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHGGR----RSSD--DTRGSFNGGGRGGGRGRGDGGSRGPS 114
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R SE+RV+V GLPSSASWQDLKDHMRK GDVCF++V RD+ GT GVVDYT EDMKYA++
Sbjct: 115 RRSEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALK 174
Query: 181 KLDDTEFRNPWARGRITVKRYDRSPSRSRSRS 212
KLDDTEFRN ++ G + V+ YD SR SRS
Sbjct: 175 KLDDTEFRNAFSNGYVRVREYD---SRKDSRS 203
>gi|357516357|ref|XP_003628467.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355522489|gb|AET02943.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 347
Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 130/212 (61%), Positives = 149/212 (70%), Gaps = 19/212 (8%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS SRT+YVGNLP DIRE EVEDLF KYG I I+LK+PPRPP Y FVEFE+ +DAED
Sbjct: 27 MSRHSSRTVYVGNLPGDIREREVEDLFMKYGHITHIDLKVPPRPPGYAFVEFEDVQDAED 86
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGY+FDG RLRVE AHGG G SS DR + G G +
Sbjct: 87 AIRGRDGYDFDGHRLRVEAAHGGRGNS-SSRDRYSSHSNGRGGRGVSRRS---------- 135
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
EYRVIV GLPSSASWQDLKDHMRKAGDVCF++V D GT G+VDYTN +DMKYAI+
Sbjct: 136 ---EYRVIVNGLPSSASWQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIK 192
Query: 181 KLDDTEFRNPWARGRITVKRYD-----RSPSR 207
KLDD+EFRN +++ + V+ YD RSP R
Sbjct: 193 KLDDSEFRNAFSKSYVRVREYDSRRDSRSPGR 224
>gi|3249109|gb|AAC24092.1| Contains similarity to pre-mRNA splicing factor (SF2), P33 subunit
gb|M72709 from Homo sapiens. ESTs gb|T42588 and
gb|R65514 come from this gene [Arabidopsis thaliana]
Length = 237
Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 131/212 (61%), Positives = 153/212 (72%), Gaps = 19/212 (8%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R++RTIYVGNLP DIR+ EVEDLFYKYG I+DI+LKIPPRPP Y FVEFE+ RDA+D
Sbjct: 1 MSSRWNRTIYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGY+FDGCRLRVE+AHGG PS + + + S
Sbjct: 61 AIYGRDGYDFDGCRLRVEIAHGGRRFSPSVD----------------RYSSSYSASRAPS 104
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R S+YRV+V GLP SASWQDLKDHMRKAGDVCF+EV D +G GVVDY+N +DMKYAIR
Sbjct: 105 RRSDYRVLVTGLPPSASWQDLKDHMRKAGDVCFSEVFPDRKGMSGVVDYSNYDDMKYAIR 164
Query: 181 KLDDTEFRNPWARGRITVKRYDRSPSRSRSRS 212
KLD TEFRN ++ I V+ Y+ SRS SRS
Sbjct: 165 KLDATEFRNAFSSAYIRVREYE---SRSVSRS 193
>gi|79582138|ref|NP_683288.2| splicing factor, arginine/serine-rich 1/9 [Arabidopsis thaliana]
gi|4775271|emb|CAB42558.1| SF2/ASF-like splicing modulator Srp30, variant 1 [Arabidopsis
thaliana]
gi|332190280|gb|AEE28401.1| splicing factor, arginine/serine-rich 1/9 [Arabidopsis thaliana]
Length = 256
Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 131/212 (61%), Positives = 153/212 (72%), Gaps = 19/212 (8%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R++RTIYVGNLP DIR+ EVEDLFYKYG I+DI+LKIPPRPP Y FVEFE+ RDA+D
Sbjct: 1 MSSRWNRTIYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGY+FDGCRLRVE+AHGG PS + + + S
Sbjct: 61 AIYGRDGYDFDGCRLRVEIAHGGRRFSPSVD----------------RYSSSYSASRAPS 104
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R S+YRV+V GLP SASWQDLKDHMRKAGDVCF+EV D +G GVVDY+N +DMKYAIR
Sbjct: 105 RRSDYRVLVTGLPPSASWQDLKDHMRKAGDVCFSEVFPDRKGMSGVVDYSNYDDMKYAIR 164
Query: 181 KLDDTEFRNPWARGRITVKRYDRSPSRSRSRS 212
KLD TEFRN ++ I V+ Y+ SRS SRS
Sbjct: 165 KLDATEFRNAFSSAYIRVREYE---SRSVSRS 193
>gi|242052807|ref|XP_002455549.1| hypothetical protein SORBIDRAFT_03g013010 [Sorghum bicolor]
gi|241927524|gb|EES00669.1| hypothetical protein SORBIDRAFT_03g013010 [Sorghum bicolor]
Length = 186
Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 129/197 (65%), Positives = 151/197 (76%), Gaps = 15/197 (7%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIRE EVEDLFYKYGRILDI+LKIPPRPP Y FVEFE+ RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVELAHGG G+ S + + + A R G+S
Sbjct: 61 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYD---------------RSSSYSSARRGGVS 105
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V R++ T G+VDYTN +DMKYAIR
Sbjct: 106 RRSDFRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKYAIR 165
Query: 181 KLDDTEFRNPWARGRIT 197
KLDD++FRN ++R I
Sbjct: 166 KLDDSQFRNAFSRCSIV 182
>gi|52140015|gb|AAU29336.1| ASF/SF2-like pre-mRNA splicing factor SRP31''' [Zea mays]
gi|413944988|gb|AFW77637.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays]
Length = 264
Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 125/202 (61%), Positives = 150/202 (74%), Gaps = 16/202 (7%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M+ R TIYVGNLP DIRE EV+DLFYKYGRI++I+LKIPPRPP + FVEFE+ARDAED
Sbjct: 1 MTRRNGCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVELAHGG G + + + AG+ G S
Sbjct: 61 AIYGRDGYNFDGHRLRVELAHGGRGTSSFDR----------------SSSYSSAGQRGAS 104
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
+ S+YRV+V GLPSSASWQDLKDHMR+AGDVCF +V R++ T G+ DYTN EDMK+AIR
Sbjct: 105 KRSDYRVMVTGLPSSASWQDLKDHMRRAGDVCFTDVYREAGATIGIADYTNYEDMKHAIR 164
Query: 181 KLDDTEFRNPWARGRITVKRYD 202
KLDD+EFRN ++R + V+ YD
Sbjct: 165 KLDDSEFRNAFSRTYVRVREYD 186
>gi|302781020|ref|XP_002972284.1| hypothetical protein SELMODRAFT_97566 [Selaginella moellendorffii]
gi|300159751|gb|EFJ26370.1| hypothetical protein SELMODRAFT_97566 [Selaginella moellendorffii]
Length = 288
Score = 243 bits (620), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 134/200 (67%), Positives = 153/200 (76%), Gaps = 11/200 (5%)
Query: 4 RFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIR 63
R SRTIYVGNLP D+RE E++DLFYKYGRILDI+LK+PPRPP Y F+EF++ RDAEDAI+
Sbjct: 3 RSSRTIYVGNLPGDVRESEIDDLFYKYGRILDIDLKLPPRPPGYAFIEFDDPRDAEDAIK 62
Query: 64 GRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGG----GGAGGAGGAGAGAGAGRFGI 119
RDGY FDG RLRVE AH G GRG S YGG G GG G G G G G+
Sbjct: 63 ARDGYVFDGHRLRVEFAHSG-GRGHPS------YGGDRHSNSYRGGGGGGGGGGGGGRGV 115
Query: 120 SRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAI 179
SR SEYRV+V GLPSSASWQDLKDHMR AGDVCFA+V R+S GT G+VD+TN +DMK AI
Sbjct: 116 SRRSEYRVVVTGLPSSASWQDLKDHMRTAGDVCFAQVFRESNGTRGIVDFTNYDDMKNAI 175
Query: 180 RKLDDTEFRNPWARGRITVK 199
RKLDDTEFRNP++ I V+
Sbjct: 176 RKLDDTEFRNPFSHSYIRVR 195
>gi|357516355|ref|XP_003628466.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355522488|gb|AET02942.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 329
Score = 243 bits (620), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 130/212 (61%), Positives = 149/212 (70%), Gaps = 19/212 (8%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS SRT+YVGNLP DIRE EVEDLF KYG I I+LK+PPRPP Y FVEFE+ +DAED
Sbjct: 27 MSRHSSRTVYVGNLPGDIREREVEDLFMKYGHITHIDLKVPPRPPGYAFVEFEDVQDAED 86
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGY+FDG RLRVE AHGG G SS DR + G G +
Sbjct: 87 AIRGRDGYDFDGHRLRVEAAHGGRGNS-SSRDRYSSHSNGRGGRGVSRRS---------- 135
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
EYRVIV GLPSSASWQDLKDHMRKAGDVCF++V D GT G+VDYTN +DMKYAI+
Sbjct: 136 ---EYRVIVNGLPSSASWQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIK 192
Query: 181 KLDDTEFRNPWARGRITVKRYD-----RSPSR 207
KLDD+EFRN +++ + V+ YD RSP R
Sbjct: 193 KLDDSEFRNAFSKSYVRVREYDSRRDSRSPGR 224
>gi|448878358|gb|AGE46142.1| arginine/serine-rich splicing factor SR30 transcript I [Sorghum
bicolor]
Length = 255
Score = 243 bits (619), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 130/202 (64%), Positives = 154/202 (76%), Gaps = 16/202 (7%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M+ R TIYVGNLP DIRE EV+DLFYKYGRI++I+LKIPPRPP + FVEFE+ DAED
Sbjct: 1 MTRRNGCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDPHDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVELAHGG RGPSS DR + + + AG+ G S
Sbjct: 61 AIYGRDGYNFDGHRLRVELAHGG--RGPSSFDR--------------SSSYSSAGQRGAS 104
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
+ S+YRV+V GLPSSASWQDLKDHMR+AGDVCF +V R++ T G+ DYTN EDMK+AIR
Sbjct: 105 KRSDYRVMVTGLPSSASWQDLKDHMRRAGDVCFTDVYREAGATIGIADYTNYEDMKHAIR 164
Query: 181 KLDDTEFRNPWARGRITVKRYD 202
KLDD+EFRN ++R I V+ YD
Sbjct: 165 KLDDSEFRNAFSRTYIRVREYD 186
>gi|356574963|ref|XP_003555612.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
Length = 264
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 136/203 (66%), Positives = 155/203 (76%), Gaps = 14/203 (6%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGR SRTIYVGNLP D+R EVEDLFYKYG I+DI+LKIPPRPP Y FVEFE+ARDAED
Sbjct: 1 MSGRSSRTIYVGNLPGDVRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI+ RDGYNFDG RLRVELAHG GRG SSS + G+G G+S
Sbjct: 61 AIQYRDGYNFDGFRLRVELAHG--GRGYSSS------------VDRYSSYSGGSGSRGVS 106
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R S+YRV+V GLP SASWQDLKDHMRKAGDVCF++V R+ G G+VDYTN +DMKYAIR
Sbjct: 107 RRSDYRVLVTGLPPSASWQDLKDHMRKAGDVCFSQVFRERGGMTGIVDYTNYDDMKYAIR 166
Query: 181 KLDDTEFRNPWARGRITVKRYDR 203
KLDD+EFRN ++R I V+ YDR
Sbjct: 167 KLDDSEFRNAFSRAFIRVREYDR 189
>gi|68035998|gb|AAY84875.1| alternative splicing regulator [Triticum aestivum]
Length = 254
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 125/202 (61%), Positives = 147/202 (72%), Gaps = 17/202 (8%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R RTIYVGNLP DIRE E+EDLF KYG I+DI+LKIPPRPP Y FVEFE+ RDA+D
Sbjct: 1 MSRRNGRTIYVGNLPEDIREREIEDLFCKYGPIVDIDLKIPPRPPVYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGY+FDGC+LRVELAHGG G S DR Y +GR G
Sbjct: 61 AIYGRDGYDFDGCKLRVELAHGGKG---PSFDRPNSY--------------TSSGRRGAL 103
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R S+YRVIV GLPSSASWQDLKDHMR+AGDVCF++V + G+V++ N EDMK+AIR
Sbjct: 104 RRSDYRVIVTGLPSSASWQDLKDHMRRAGDVCFSDVYPGAGAITGIVEFPNYEDMKHAIR 163
Query: 181 KLDDTEFRNPWARGRITVKRYD 202
KLDD+EFRN ++R I V+ Y+
Sbjct: 164 KLDDSEFRNAFSRTYIRVREYN 185
>gi|356505580|ref|XP_003521568.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor SF2-like
[Glycine max]
Length = 326
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 130/201 (64%), Positives = 150/201 (74%), Gaps = 14/201 (6%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIRE EVEDLF KYG I I+LK+PPRPP Y FVEFE+A+DAED
Sbjct: 1 MSRRSSRTVYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGY+FDG RLRVE AHGG G SS DR + G G +S
Sbjct: 61 AIRGRDGYDFDGHRLRVEPAHGGRGHS-SSRDRYNSHSNGRGGRG-------------VS 106
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R SEYRV+V GLPSSASWQDLKDHMRKAGDVCF++V D GT G+VDYTN +DMKYAI+
Sbjct: 107 RRSEYRVLVSGLPSSASWQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIK 166
Query: 181 KLDDTEFRNPWARGRITVKRY 201
KLDD+EFRN +++G + V+ Y
Sbjct: 167 KLDDSEFRNAFSKGYVRVREY 187
>gi|226496385|ref|NP_001151386.1| LOC100285019 [Zea mays]
gi|195646352|gb|ACG42644.1| pre-mRNA-splicing factor SF2 [Zea mays]
Length = 275
Score = 241 bits (614), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 124/202 (61%), Positives = 149/202 (73%), Gaps = 17/202 (8%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M+ R TIYVGNLP DIRE EV+DLFYKYGRI++I+LKIPPRPP + FVEFE+A DAED
Sbjct: 1 MTRRNGCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDA-DAED 59
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVELAHGG G + + + AG+ G S
Sbjct: 60 AIYGRDGYNFDGHRLRVELAHGGRG----------------TSSFDRSSSYSSAGQRGAS 103
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
+ S+YRV+V GLPSSASWQDLKDHMR+AGDVCF +V R++ T G+ DYTN EDMK+AIR
Sbjct: 104 KRSDYRVMVTGLPSSASWQDLKDHMRRAGDVCFTDVYREAGATIGIADYTNYEDMKHAIR 163
Query: 181 KLDDTEFRNPWARGRITVKRYD 202
KLDD+EFRN ++R + V+ YD
Sbjct: 164 KLDDSEFRNAFSRTYVRVREYD 185
>gi|224285040|gb|ACN40249.1| unknown [Picea sitchensis]
Length = 398
Score = 240 bits (612), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 124/192 (64%), Positives = 143/192 (74%), Gaps = 15/192 (7%)
Query: 8 TIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDG 67
TIYVGNLP DIRE E+EDLFYKYGRI+DI+LK+PPRPP YCF+EF+NARDAEDAIRGRDG
Sbjct: 7 TIYVGNLPGDIRESEIEDLFYKYGRIIDIDLKLPPRPPGYCFIEFDNARDAEDAIRGRDG 66
Query: 68 YNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRV 127
Y FDG RLRVE AHG + SS D G+ + R + YRV
Sbjct: 67 YKFDGHRLRVERAHGRA----SSVD-----------VYYGSHSSGSRSSGLYRRSTGYRV 111
Query: 128 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
IV GLP+SASWQDLKDHMR+AGDVCF++V R GT GVVDYT+ EDMKYAIRKLDD+EF
Sbjct: 112 IVHGLPTSASWQDLKDHMRRAGDVCFSQVYRKGSGTVGVVDYTSYEDMKYAIRKLDDSEF 171
Query: 188 RNPWARGRITVK 199
RNP++R I V+
Sbjct: 172 RNPFSRSYIRVR 183
>gi|52140014|gb|AAU29335.1| ASF/SF2-like pre-mRNA splicing factor SRP31'' [Zea mays]
gi|224035263|gb|ACN36707.1| unknown [Zea mays]
gi|413944990|gb|AFW77639.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays]
Length = 284
Score = 239 bits (610), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 125/210 (59%), Positives = 150/210 (71%), Gaps = 24/210 (11%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYK--------YGRILDIELKIPPRPPCYCFVEF 52
M+ R TIYVGNLP DIRE EV+DLFYK YGRI++I+LKIPPRPP + FVEF
Sbjct: 1 MTRRNGCTIYVGNLPGDIREREVDDLFYKGRQCGLRMYGRIVEIDLKIPPRPPGFAFVEF 60
Query: 53 ENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGA 112
E+ARDAEDAI GRDGYNFDG RLRVELAHGG G + + +
Sbjct: 61 EDARDAEDAIYGRDGYNFDGHRLRVELAHGGRG----------------TSSFDRSSSYS 104
Query: 113 GAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNP 172
AG+ G S+ S+YRV+V GLPSSASWQDLKDHMR+AGDVCF +V R++ T G+ DYTN
Sbjct: 105 SAGQRGASKRSDYRVMVTGLPSSASWQDLKDHMRRAGDVCFTDVYREAGATIGIADYTNY 164
Query: 173 EDMKYAIRKLDDTEFRNPWARGRITVKRYD 202
EDMK+AIRKLDD+EFRN ++R + V+ YD
Sbjct: 165 EDMKHAIRKLDDSEFRNAFSRTYVRVREYD 194
>gi|224123814|ref|XP_002330215.1| predicted protein [Populus trichocarpa]
gi|222871671|gb|EEF08802.1| predicted protein [Populus trichocarpa]
Length = 226
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 127/199 (63%), Positives = 145/199 (72%), Gaps = 14/199 (7%)
Query: 4 RFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIR 63
R SRT+YVGNLP DIR EVEDLFYKYG I+DI+LKIPPRPP Y FVEFE+A DA+ AIR
Sbjct: 3 RASRTLYVGNLPGDIRVREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDAHDAKYAIR 62
Query: 64 GRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHS 123
G DGYNFD CRLRVELAHGG R S DR Y G +HS
Sbjct: 63 GLDGYNFDACRLRVELAHGGR-RHSSPVDRYSSYSGSSGSRGP-------------PKHS 108
Query: 124 EYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLD 183
+YRV+V GLPSSASWQDLKDHMR+AGDVCF++V RD G G+VDYTN +DMKYAI+KLD
Sbjct: 109 DYRVLVSGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTNYDDMKYAIKKLD 168
Query: 184 DTEFRNPWARGRITVKRYD 202
D+EFRN ++R I V+ YD
Sbjct: 169 DSEFRNAFSRAYIRVREYD 187
>gi|297814065|ref|XP_002874916.1| hypothetical protein ARALYDRAFT_327556 [Arabidopsis lyrata subsp.
lyrata]
gi|297320753|gb|EFH51175.1| hypothetical protein ARALYDRAFT_327556 [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 236 bits (603), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 129/196 (65%), Positives = 145/196 (73%), Gaps = 5/196 (2%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIRE EVEDLF KYG ++ I+LKIPPRPP Y FVEFE+ARDA+D
Sbjct: 1 MSSRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADD 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGY+FDG RLRVELAHGG S G G G G G G S
Sbjct: 61 AIYGRDGYDFDGHRLRVELAHGG-----RRSSHDARGSYSGGGRGGRDGGDGGVRGRGPS 115
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R SEYRV+V GLPSSASWQDLKDHMRK G+VCF++V RD GT G+VDYT+ EDMKYAI+
Sbjct: 116 RRSEYRVVVSGLPSSASWQDLKDHMRKGGEVCFSQVFRDGRGTTGIVDYTSYEDMKYAIK 175
Query: 181 KLDDTEFRNPWARGRI 196
KLDDTEFRN ++ G +
Sbjct: 176 KLDDTEFRNAFSHGYV 191
>gi|166844|gb|AAA32856.1| ribonucleoprotein [Arabidopsis thaliana]
gi|1582992|prf||2119375A Ser/Arg-rich protein
Length = 303
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 134/212 (63%), Positives = 154/212 (72%), Gaps = 9/212 (4%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIRE EVEDLF KYG ++ I+LK+PPRPP Y FVEF++ARDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGY+FDG RLRVELAHGG SSD G GG GG G G S
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHGGR----RSSD--DTRGSFNGGGRGGGRGRGDGGSRGPS 114
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R SE+RV+V L SSASWQDLKDH+ K GDVCF++V RD+ GT GVVDYT EDMKYA++
Sbjct: 115 RRSEFRVLVTWLASSASWQDLKDHIAKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALK 174
Query: 181 KLDDTEFRNPWARGRITVKRYDRSPSRSRSRS 212
KLDDTEFRN ++ G + V+ YD SR SRS
Sbjct: 175 KLDDTEFRNAFSNGYVRVREYD---SRKDSRS 203
>gi|255542752|ref|XP_002512439.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223548400|gb|EEF49891.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 444
Score = 223 bits (569), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 118/214 (55%), Positives = 149/214 (69%), Gaps = 6/214 (2%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS SRT+YVGNLP DIR EV+DLFYKYG I+ ++L+ PPR P Y FV+FE+A +AE+
Sbjct: 1 MSSCASRTLYVGNLPGDIRWREVKDLFYKYGLIVRVDLRNPPRTPGYAFVQFEDACNAEE 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRG-PSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGI 119
AIRGRDGYNF+GCRLRVELA+GG P R+ + G G G
Sbjct: 61 AIRGRDGYNFNGCRLRVELAYGGRKHSTPGHGGRKHSFPGRHYNTCSGISENHGP----- 115
Query: 120 SRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAI 179
S+HS++RV+V GLPSSASWQDLKDHMR+AGDVCF+ V G G+VDY N +DMK+AI
Sbjct: 116 SKHSDHRVLVTGLPSSASWQDLKDHMRQAGDVCFSRVFPGRGGKTGIVDYKNYDDMKHAI 175
Query: 180 RKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSR 213
+KLDD+EFRN ++R + V++ D S S+S S
Sbjct: 176 KKLDDSEFRNAFSRSYVRVRKDDSRRSYSQSPSH 209
>gi|448878372|gb|AGE46149.1| arginine/serine-rich splicing factor SR27 transcript II [Sorghum
bicolor]
Length = 165
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/178 (66%), Positives = 136/178 (76%), Gaps = 15/178 (8%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIRE EVEDLFYKYGRILDI+LKIPPRPP Y FVEFE+ RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVELAHGG G+ S + + + A R G+S
Sbjct: 61 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYD---------------RSSSYSSARRGGVS 105
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYA 178
R S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V R++ T G+VDYTN +DMKYA
Sbjct: 106 RRSDFRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKYA 163
>gi|224128490|ref|XP_002320345.1| predicted protein [Populus trichocarpa]
gi|222861118|gb|EEE98660.1| predicted protein [Populus trichocarpa]
Length = 168
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 122/180 (67%), Positives = 133/180 (73%), Gaps = 13/180 (7%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIRE EVEDLFYKYG I I+LKIPPRPP Y FVEFE ARDAED
Sbjct: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGY+FDG RLRVELAHGG G S G GR G+S
Sbjct: 61 AIRGRDGYDFDGHRLRVELAHGGRGHSSSDR-------------HSSYSGSGGRGRGGVS 107
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R SEYRV+V GLPSSASWQDLKDHMR+AGDVCF++V RD GT G+VDYTN EDMKYA++
Sbjct: 108 RRSEYRVVVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYEDMKYAVK 167
>gi|218200241|gb|EEC82668.1| hypothetical protein OsI_27298 [Oryza sativa Indica Group]
Length = 321
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 119/202 (58%), Positives = 139/202 (68%), Gaps = 34/202 (16%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R+SRTIYVGNLP DIRE EVEDLFYKYGRI+DI+LKIPPRPP + FVEFE+ RDAED
Sbjct: 67 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAED 126
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGYNFDG RLRVELAHGG G S ++ +G G R G+S
Sbjct: 127 AIRGRDGYNFDGNRLRVELAHGGRGNSSSFNN-----------------SGGGGRRGGVS 169
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
RH+EYRV+V GLPSSASWQDLKDHMR AGDV + + ++ IR
Sbjct: 170 RHTEYRVLVTGLPSSASWQDLKDHMRNAGDVVTLKCT-----------------VRVVIR 212
Query: 181 KLDDTEFRNPWARGRITVKRYD 202
KLDD+EF+N +++ I VK YD
Sbjct: 213 KLDDSEFKNAFSKAYIRVKEYD 234
>gi|357442431|ref|XP_003591493.1| Serine/arginine-rich splicing factor [Medicago truncatula]
gi|355480541|gb|AES61744.1| Serine/arginine-rich splicing factor [Medicago truncatula]
Length = 390
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 113/193 (58%), Positives = 133/193 (68%), Gaps = 14/193 (7%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS SRT+YVGNLP DIRE EV+ LF KYG I I+LK+PPRPPCY FV F++A +A+D
Sbjct: 54 MSRHLSRTVYVGNLPGDIREREVKHLFMKYGHITRIDLKVPPRPPCYAFVVFKDALNADD 113
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI DGY+FDGCRLRVE AH G SSS R G GG G+S
Sbjct: 114 AICECDGYDFDGCRLRVEAAHVGYCN--SSSRDRYSIHSNGQGGR------------GVS 159
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
HSEYRV+V LPSSAS QDLKDHMRKAG VCF++V D T G+VDYTN +DMKYAI+
Sbjct: 160 SHSEYRVLVNRLPSSASCQDLKDHMRKAGAVCFSQVVHDGRVTTGIVDYTNCDDMKYAIK 219
Query: 181 KLDDTEFRNPWAR 193
LD +EF+N ++R
Sbjct: 220 NLDGSEFQNAFSR 232
>gi|30679143|ref|NP_567235.3| splicing factor SR1B [Arabidopsis thaliana]
gi|332656770|gb|AEE82170.1| splicing factor SR1B [Arabidopsis thaliana]
Length = 278
Score = 216 bits (550), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 132/251 (52%), Positives = 151/251 (60%), Gaps = 12/251 (4%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIRE EVEDLF KYG ++ I+LKIPPRPP Y FVEFE+ARDA+D
Sbjct: 1 MSSRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADD 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGY+FDG LRVELAHGG S G G G G G G S
Sbjct: 61 AIYGRDGYDFDGHHLRVELAHGGR-----RSSHDARGSYSGRGRGGRGGGDGGGRERGPS 115
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R SEYRV+V GLPSSASWQDLKDHMRK G+VCF++V RD GT G+VDYT+ EDMKYA
Sbjct: 116 RRSEYRVVVSGLPSSASWQDLKDHMRKGGEVCFSQVFRDGRGTTGIVDYTSYEDMKYA-- 173
Query: 181 KLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRSRIVRRNRSKSLERSVSRSV- 239
LDDTEFRN ++ + V+ YD R
Sbjct: 174 -LDDTEFRNAFSHEYVRVREYDSRRDSRSPSRGRSYSKSRSRGRSPSRSRSRSRSRSKSR 232
Query: 240 ---SRSMSASP 247
++S+ SP
Sbjct: 233 SPKAKSLRRSP 243
>gi|30679138|ref|NP_849537.1| splicing factor SR1B [Arabidopsis thaliana]
gi|26451203|dbj|BAC42705.1| unknown protein [Arabidopsis thaliana]
gi|332656771|gb|AEE82171.1| splicing factor SR1B [Arabidopsis thaliana]
Length = 178
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 119/181 (65%), Positives = 132/181 (72%), Gaps = 5/181 (2%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIRE EVEDLF KYG ++ I+LKIPPRPP Y FVEFE+ARDA+D
Sbjct: 1 MSSRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADD 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGY+FDG LRVELAHGG S G G G G G G S
Sbjct: 61 AIYGRDGYDFDGHHLRVELAHGG-----RRSSHDARGSYSGRGRGGRGGGDGGGRERGPS 115
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R SEYRV+V GLPSSASWQDLKDHMRK G+VCF++V RD GT G+VDYT+ EDMKYAI+
Sbjct: 116 RRSEYRVVVSGLPSSASWQDLKDHMRKGGEVCFSQVFRDGRGTTGIVDYTSYEDMKYAIK 175
Query: 181 K 181
K
Sbjct: 176 K 176
>gi|3193304|gb|AAC19288.1| T14P8.21 [Arabidopsis thaliana]
gi|7269003|emb|CAB80736.1| AT4g02430 [Arabidopsis thaliana]
Length = 294
Score = 213 bits (541), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 118/180 (65%), Positives = 131/180 (72%), Gaps = 5/180 (2%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIRE EVEDLF KYG ++ I+LKIPPRPP Y FVEFE+ARDA+D
Sbjct: 1 MSSRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADD 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGY+FDG LRVELAHGG S G G G G G G S
Sbjct: 61 AIYGRDGYDFDGHHLRVELAHGG-----RRSSHDARGSYSGRGRGGRGGGDGGGRERGPS 115
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R SEYRV+V GLPSSASWQDLKDHMRK G+VCF++V RD GT G+VDYT+ EDMKYA+R
Sbjct: 116 RRSEYRVVVSGLPSSASWQDLKDHMRKGGEVCFSQVFRDGRGTTGIVDYTSYEDMKYAVR 175
>gi|222618302|gb|EEE54434.1| hypothetical protein OsJ_01505 [Oryza sativa Japonica Group]
Length = 270
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 127/220 (57%), Positives = 143/220 (65%), Gaps = 40/220 (18%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIRE EVEDLFYK FE+ RDA+D
Sbjct: 72 MSRRNSRTIYVGNLPGDIREREVEDLFYK----------------------FEDPRDADD 109
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVELAHGG G+ S DR Y G GG +S
Sbjct: 110 AICGRDGYNFDGYRLRVELAHGGRGQS-YSYDRPRSYSSGRRGG--------------VS 154
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R SEYRV+V GLPSSASWQDLKDHMR+AGDVCF++V R++ T G+VDYT EDMKYAIR
Sbjct: 155 RRSEYRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGATVGIVDYTTYEDMKYAIR 214
Query: 181 KLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRS 220
KLDD+EFRN ++R I V+ S SRSR+ S SR RS
Sbjct: 215 KLDDSEFRNAFSRAYIRVR---ESISRSRTPVSSPSRGRS 251
>gi|388500622|gb|AFK38377.1| unknown [Lotus japonicus]
Length = 174
Score = 210 bits (534), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 116/183 (63%), Positives = 133/183 (72%), Gaps = 14/183 (7%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIR EVED+FYK+G I+DI+LKIPPRPP Y FV+FE+ARDAED
Sbjct: 1 MSSRSSRTIYVGNLPGDIRLREVEDIFYKFGPIVDIDLKIPPRPPGYAFVQFEDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI RDGY+FDG RLRVELAHGG G S + G+ G S
Sbjct: 61 AIYYRDGYDFDGFRLRVELAHGGRGSSSSVD--------------RYSSYSGGSSSRGAS 106
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R S+YRV+V GLP SASWQDLKDHMRKAGDVCF++V R+ G G+VDYTN +DMKYA+R
Sbjct: 107 RRSDYRVLVTGLPPSASWQDLKDHMRKAGDVCFSQVFRERGGMTGIVDYTNYDDMKYALR 166
Query: 181 KLD 183
KLD
Sbjct: 167 KLD 169
>gi|357516359|ref|XP_003628468.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355522490|gb|AET02944.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 273
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 109/184 (59%), Positives = 127/184 (69%), Gaps = 19/184 (10%)
Query: 29 KYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGP 88
KYG I I+LK+PPRPP Y FVEFE+ +DAEDAIRGRDGY+FDG RLRVE AHGG G
Sbjct: 2 KYGHITHIDLKVPPRPPGYAFVEFEDVQDAEDAIRGRDGYDFDGHRLRVEAAHGGRGNS- 60
Query: 89 SSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKA 148
SS DR + G G + EYRVIV GLPSSASWQDLKDHMRKA
Sbjct: 61 SSRDRYSSHSNGRGGRGVSRRS-------------EYRVIVNGLPSSASWQDLKDHMRKA 107
Query: 149 GDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD-----R 203
GDVCF++V D GT G+VDYTN +DMKYAI+KLDD+EFRN +++ + V+ YD R
Sbjct: 108 GDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSKSYVRVREYDSRRDSR 167
Query: 204 SPSR 207
SP R
Sbjct: 168 SPGR 171
>gi|52140007|gb|AAU29330.1| ASF/SF2-like pre-mRNA splicing factor SRP32'' [Zea mays]
Length = 150
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/162 (67%), Positives = 120/162 (74%), Gaps = 13/162 (8%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R+SRTIYVGNLP DIRE EVEDLFYKYG+I+DI+LK+PPRPP Y FVEFE+ RDAE+
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGKIVDIDLKVPPRPPGYAFVEFEDPRDAEE 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVE AHGG G S G G R G+S
Sbjct: 61 AIAGRDGYNFDGHRLRVEAAHGGRGNASSHD-------------RSSGFGGGGGARRGVS 107
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEG 162
RHSEYRV+V GLPSSASWQDLKDHMRKAGDVCF+EV R+ G
Sbjct: 108 RHSEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGGG 149
>gi|51854465|gb|AAU10844.1| putative SF2/ASF splicing modulator Srp30 [Oryza sativa Japonica
Group]
Length = 145
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 107/162 (66%), Positives = 124/162 (76%), Gaps = 17/162 (10%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIRE EVEDLFYKYGRI+DI+LKIPPRPP Y FVEFE+ RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQD 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GR GY+FDG RLRVELAHG GRGP S DR + + + AGR G +
Sbjct: 61 AIYGRHGYDFDGHRLRVELAHG--GRGP-SFDR--------------SSSYSSAGRRGAA 103
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEG 162
+ ++YRV+V GLPSSASWQDLKDHMR+AGDVCF++V R+ G
Sbjct: 104 KRTDYRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREGGG 145
>gi|54291866|gb|AAV32234.1| putative pre-mRNA splicing factor SF2 [Oryza sativa Japonica Group]
Length = 151
Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 104/155 (67%), Positives = 120/155 (77%), Gaps = 17/155 (10%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIRE EVEDLFYKYGRI+DI+LKIPPRPP Y FVEFE+ RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQD 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GR GY+FDG RLRVELAHG GRGP S DR + + + AGR G +
Sbjct: 61 AIYGRHGYDFDGHRLRVELAHG--GRGP-SFDR--------------SSSYSSAGRRGAA 103
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAE 155
+ ++YRV+V GLPSSASWQDLKDHMR+AGDVCF++
Sbjct: 104 KRTDYRVMVTGLPSSASWQDLKDHMRRAGDVCFSD 138
>gi|340726341|ref|XP_003401518.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Bombus
terrestris]
gi|350423930|ref|XP_003493634.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Bombus
impatiens]
Length = 248
Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 116/220 (52%), Positives = 146/220 (66%), Gaps = 9/220 (4%)
Query: 3 GRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAI 62
GR IYVGNLP DIR +++DLFYK+G+++ ++LK PP + FVEF++ RDAEDA+
Sbjct: 5 GRNECRIYVGNLPPDIRTKDIQDLFYKFGKVIFVDLKNRRGPP-FAFVEFDDPRDAEDAV 63
Query: 63 RGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRH 122
RDGY++DG RLRVE GG GPS++ RGG G G +G G GR +R
Sbjct: 64 HARDGYDYDGYRLRVEFPRGG---GPSNN-FRGGRGAGDSGRGGRGEMSNSRGRGPPARR 119
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKL 182
S+YRV+V GLP S SWQDLKDHMR+AGDVCFA+V +D GT GVV++ EDMKYA++KL
Sbjct: 120 SQYRVLVTGLPPSGSWQDLKDHMREAGDVCFADVYKD--GT-GVVEFLRYEDMKYAVKKL 176
Query: 183 DDTEFRNPWAR-GRITVKRYDRSPSRSRSRSRSRSRSRSR 221
DD+ FR+ I VK S R RS R R RS SR
Sbjct: 177 DDSRFRSHEGEVAYIRVKEDHNSGDRGRSEDRERGRSHSR 216
>gi|66548276|ref|XP_393525.2| PREDICTED: serine/arginine-rich splicing factor 1-like [Apis
mellifera]
Length = 248
Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 116/220 (52%), Positives = 146/220 (66%), Gaps = 9/220 (4%)
Query: 3 GRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAI 62
GR IYVGNLP DIR +++DLFYK+G+++ ++LK PP + FVEF++ RDAEDA+
Sbjct: 5 GRNECRIYVGNLPPDIRTKDIQDLFYKFGKVIFVDLKNRRGPP-FAFVEFDDPRDAEDAV 63
Query: 63 RGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRH 122
RDGY++DG RLRVE GG GPS++ RGG G G +G G GR +R
Sbjct: 64 HARDGYDYDGYRLRVEFPRGG---GPSNN-FRGGRGAGDSGRGGRGEMSNSRGRGPPARR 119
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKL 182
S+YRV+V GLP S SWQDLKDHMR+AGDVCFA+V +D GT GVV++ EDMKYA++KL
Sbjct: 120 SQYRVLVTGLPPSGSWQDLKDHMREAGDVCFADVFKD--GT-GVVEFLRYEDMKYAVKKL 176
Query: 183 DDTEFRNPWAR-GRITVKRYDRSPSRSRSRSRSRSRSRSR 221
DD+ FR+ I VK S R RS R R RS SR
Sbjct: 177 DDSRFRSHEGEVAYIRVKEDHNSGDRGRSEDRERGRSHSR 216
>gi|383848005|ref|XP_003699643.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Megachile
rotundata]
Length = 248
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 116/220 (52%), Positives = 146/220 (66%), Gaps = 9/220 (4%)
Query: 3 GRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAI 62
GR IYVGNLP DIR +++DLFYK+G+++ ++LK PP + FVEF++ RDAEDA+
Sbjct: 5 GRNECRIYVGNLPPDIRTKDIQDLFYKFGKVIFVDLKNRRGPP-FAFVEFDDPRDAEDAV 63
Query: 63 RGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRH 122
RDGY++DG RLRVE GG GPS++ RGG G G +G G GR +R
Sbjct: 64 HARDGYDYDGYRLRVEFPRGG---GPSNN-FRGGRGAGDSGRGGRGEMSNSRGRGPPARR 119
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKL 182
S+YRV+V GLP S SWQDLKDHMR+AGDVCFA+V +D GT GVV++ EDMKYA++KL
Sbjct: 120 SQYRVLVTGLPPSGSWQDLKDHMREAGDVCFADVYKD--GT-GVVEFLRYEDMKYAVKKL 176
Query: 183 DDTEFRNPWAR-GRITVKRYDRSPSRSRSRSRSRSRSRSR 221
DD+ FR+ I VK S R RS R R RS SR
Sbjct: 177 DDSRFRSHEGEVAYIRVKEDHSSGDRGRSEDRERGRSHSR 216
>gi|302847745|ref|XP_002955406.1| hypothetical protein VOLCADRAFT_45192 [Volvox carteri f.
nagariensis]
gi|300259248|gb|EFJ43477.1| hypothetical protein VOLCADRAFT_45192 [Volvox carteri f.
nagariensis]
Length = 245
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/183 (58%), Positives = 132/183 (72%), Gaps = 2/183 (1%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VGNLP D+RE EVEDLF+KYGRI ++LKI PRPP + FVEFE+ RDA DA+RGRDG
Sbjct: 1 VFVGNLPMDVREREVEDLFFKYGRIRSVDLKIGPRPPAFAFVEFEDQRDAYDAVRGRDGI 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
F G RLRVE++HG G GG G GG GG G G G +G SR ++YRVI
Sbjct: 61 EFQGQRLRVEISHGRRGGFGGGGGGGGGGGYGGGGGGGYGGGGPNP--YGPSRRTDYRVI 118
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S+SWQDLKDHMR+AG+V F++V RD G G++DY EDM+ A+RKLD +EFR
Sbjct: 119 VTGLPISSSWQDLKDHMRRAGEVTFSQVMRDGRGMLGLIDYATREDMETALRKLDGSEFR 178
Query: 189 NPW 191
NP+
Sbjct: 179 NPY 181
>gi|380024306|ref|XP_003695942.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 1-like [Apis florea]
Length = 248
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 115/220 (52%), Positives = 145/220 (65%), Gaps = 9/220 (4%)
Query: 3 GRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAI 62
GR IYVGNLP DIR +++DLFYK+G+++ ++LK PP + FVEF++ RDAEDA+
Sbjct: 5 GRNECRIYVGNLPPDIRTKDIQDLFYKFGKVIFVDLKNRRGPP-FAFVEFDDPRDAEDAV 63
Query: 63 RGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRH 122
RDGY++DG RLRVE GG GPS++ RGG G G +G G GR +R
Sbjct: 64 HARDGYDYDGYRLRVEFPRGG---GPSNN-FRGGRGAGDSGRGGRGEMSNSRGRGPPARR 119
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKL 182
S+YRV+V GLP S SWQDLKDHMR+AGDVCFA+V +D GT GVV++ EDMKYA++K
Sbjct: 120 SQYRVLVTGLPPSGSWQDLKDHMREAGDVCFADVFKD--GT-GVVEFLRYEDMKYAVKKX 176
Query: 183 DDTEFRNPWAR-GRITVKRYDRSPSRSRSRSRSRSRSRSR 221
DD+ FR+ I VK S R RS R R RS SR
Sbjct: 177 DDSRFRSHEGEVAYIRVKEDHNSGDRGRSEDRERGRSHSR 216
>gi|301116808|ref|XP_002906132.1| pre-mRNA-splicing factor SF2 [Phytophthora infestans T30-4]
gi|262107481|gb|EEY65533.1| pre-mRNA-splicing factor SF2 [Phytophthora infestans T30-4]
Length = 297
Score = 190 bits (482), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 106/195 (54%), Positives = 124/195 (63%), Gaps = 28/195 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNLP DIR EVED+FYKYGRI DI++K P RPP + FV+FE+ARDAEDAIRGRDGY
Sbjct: 6 VYVGNLPMDIRTREVEDIFYKYGRIRDIDVKFPSRPPAFAFVDFEDARDAEDAIRGRDGY 65
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRF--GISRHSEYR 126
++DG RLRVE A+GG S R G+ R+ I + E+
Sbjct: 66 DYDGARLRVEAANGGRRESARDSAR-------------------GSARYPRNIRGNGEFT 106
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTE 186
V V LP SWQDLKD MRKAGDV F EV D G GVV+Y+N DMKYA+ KLDDTE
Sbjct: 107 VEVSNLPPRVSWQDLKDFMRKAGDVTFTEV--DGRGG-GVVEYSNKRDMKYAVEKLDDTE 163
Query: 187 FR----NPWARGRIT 197
FR N + R R T
Sbjct: 164 FRGRSENSYVRVRQT 178
>gi|332027470|gb|EGI67553.1| Splicing factor, arginine/serine-rich 1 [Acromyrmex echinatior]
Length = 248
Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 110/214 (51%), Positives = 140/214 (65%), Gaps = 9/214 (4%)
Query: 3 GRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAI 62
GR IYVGNLP DIR +++DLFYK+G++ ++LK PP + FVEF++ RDAEDA+
Sbjct: 5 GRNECRIYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRRGPP-FAFVEFDDPRDAEDAV 63
Query: 63 RGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRH 122
RDGY++DG RLRVE GG GPS++ RGG G G +G G GR +R
Sbjct: 64 HARDGYDYDGYRLRVEFPRGG---GPSNN-FRGGRGAGDSGRGGRGEMSNSRGRGPPARR 119
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKL 182
S+YRV+V GLP S SWQDLKDHMR+AGDVCFA+V +D GT GVV++ +DMKYA++KL
Sbjct: 120 SQYRVLVSGLPPSGSWQDLKDHMREAGDVCFADVYKD--GT-GVVEFLRHDDMKYAVKKL 176
Query: 183 DDTEFRNPWAR-GRITVKRYDRSPSRSRSRSRSR 215
DD+ FR+ I VK R RS R R
Sbjct: 177 DDSRFRSHEGEVAYIRVKEDHSGGDRGRSEDRER 210
>gi|449522400|ref|XP_004168214.1| PREDICTED: pre-mRNA-splicing factor SF2-like, partial [Cucumis
sativus]
Length = 106
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/97 (89%), Positives = 90/97 (92%), Gaps = 2/97 (2%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS RFSRTIYVGNLPSDI+EYE+EDLFYKYGRILDIELKIPPRPPCYCFVEFE+ RDAED
Sbjct: 1 MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGY 97
AIR RDGYNFDGCRLRVELAHG GRGPSSSDRR Y
Sbjct: 61 AIRARDGYNFDGCRLRVELAHG--GRGPSSSDRRSSY 95
>gi|322789865|gb|EFZ15012.1| hypothetical protein SINV_14247 [Solenopsis invicta]
Length = 186
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/186 (54%), Positives = 131/186 (70%), Gaps = 8/186 (4%)
Query: 3 GRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAI 62
GR IYVGNLP DIR +++DLFYK+G++ ++LK PP + FVEF++ RDAEDA+
Sbjct: 6 GRNECRIYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRRGPP-FAFVEFDDPRDAEDAV 64
Query: 63 RGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRH 122
RDGY++DG RLRVE GG GPS++ RGG G G +G G GR +R
Sbjct: 65 HARDGYDYDGYRLRVEFPRGG---GPSNN-FRGGRGAGDSGRGGRGEMSNSRGRGPPARR 120
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKL 182
S+YRV+V GLP S SWQDLKDHMR+AGDVCFA+V +D GT GVV++ +DMKYA++KL
Sbjct: 121 SQYRVLVSGLPPSGSWQDLKDHMREAGDVCFADVYKD--GT-GVVEFLRHDDMKYAVKKL 177
Query: 183 DDTEFR 188
DD+ FR
Sbjct: 178 DDSRFR 183
>gi|428183363|gb|EKX52221.1| hypothetical protein GUITHDRAFT_41825, partial [Guillardia theta
CCMP2712]
Length = 195
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/191 (49%), Positives = 121/191 (63%), Gaps = 24/191 (12%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++EDLFYKYGRI DIE+K P RPP + FV FE+ RDAEDAIRGRDG
Sbjct: 1 IYVGNLPLDIRTRDIEDLFYKYGRIRDIEVKTPNRPPAFAFVSFEDYRDAEDAIRGRDGI 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+F+G RLR E++ G RG RR R S+YRVI
Sbjct: 61 SFEGARLRCEMSRGNGPRGSRQQPRRD------------------------LRRSDYRVI 96
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V LP SASWQDLKDH R+ G+V + +V R + + G+V++ + + + AI++LDDTEF+
Sbjct: 97 VSNLPPSASWQDLKDHFRQVGEVVYTDVDRSLKSSGGIVEFASRSEQEAAIKQLDDTEFK 156
Query: 189 NPWARGRITVK 199
NP+ + I VK
Sbjct: 157 NPFDKVYIRVK 167
>gi|157113456|ref|XP_001657837.1| arginine/serine-rich splicing factor [Aedes aegypti]
gi|108877724|gb|EAT41949.1| AAEL006473-PA [Aedes aegypti]
Length = 237
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/188 (55%), Positives = 132/188 (70%), Gaps = 15/188 (7%)
Query: 3 GRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAI 62
GR IYVGNLP DIR +++DLF+K+G++ ++LK PP + FVEFE+ARDA+DA+
Sbjct: 4 GRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADDAV 62
Query: 63 RGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYG--GGGAGGAGGAGAGAGAGRFGIS 120
+ RDGY++DG RLRVE GG G G SS RGG GGGA G G A
Sbjct: 63 KARDGYDYDGYRLRVEFPRGG-GPGRYSSSSRGGNSDRGGGARDRGNRGPPA-------- 113
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R S++RV+V GLP+S SWQDLKDHMR+AGDVCFA+V +D GT GVV++ EDMKYAI+
Sbjct: 114 RRSQFRVMVTGLPASGSWQDLKDHMREAGDVCFADVYKD--GT-GVVEFLRHEDMKYAIK 170
Query: 181 KLDDTEFR 188
KLDD+ FR
Sbjct: 171 KLDDSRFR 178
>gi|307203784|gb|EFN82720.1| Splicing factor, arginine/serine-rich 1 [Harpegnathos saltator]
Length = 193
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/187 (54%), Positives = 132/187 (70%), Gaps = 8/187 (4%)
Query: 3 GRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAI 62
GR IYVGNLP DIR +++DLFYK+G++ ++LK PP + FVEF++ RDAEDA+
Sbjct: 5 GRNECRIYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRRGPP-FAFVEFDDPRDAEDAV 63
Query: 63 RGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRH 122
RDGY++DG RLRVE GG GPS++ RGG G G +G G GR +R
Sbjct: 64 HARDGYDYDGYRLRVEFPRGG---GPSNN-FRGGRGAGDSGRGGRGEMSNSRGRGPPARR 119
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKL 182
S+YRV+V GLP S SWQDLKDHMR+AGDVCFA+V +D GT GVV++ +DMKYA++KL
Sbjct: 120 SQYRVLVTGLPPSGSWQDLKDHMREAGDVCFADVYKD--GT-GVVEFLRHDDMKYAVKKL 176
Query: 183 DDTEFRN 189
DD+ FR+
Sbjct: 177 DDSRFRS 183
>gi|384252888|gb|EIE26363.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 343
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/199 (52%), Positives = 123/199 (61%), Gaps = 9/199 (4%)
Query: 8 TIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDG 67
I+VGNLP D+RE E+EDLFYKYGRI +I+LK+PPRPP + FVEFE AEDA++GRDG
Sbjct: 7 VIFVGNLPGDVREREIEDLFYKYGRIRNIDLKLPPRPPAFAFVEFEKPSHAEDAVKGRDG 66
Query: 68 YNFDGCRLRVELAHGGSGR--------GPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGI 119
Y FD +RVEL+ GG G G DR GGGG G A F
Sbjct: 67 YVFDNNPIRVELSRGGMGGRSGGDKTSGAPPRDRDEPRGGGGGATFGRAAPPPVPSNFR- 125
Query: 120 SRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAI 179
+ S YR V+ LP SASWQDLKDH RK + V RD G GVV++ PED+ AI
Sbjct: 126 QKGSAYRATVKNLPMSASWQDLKDHFRKVCTPNYVNVFRDRGGVLGVVEFDTPEDLARAI 185
Query: 180 RKLDDTEFRNPWARGRITV 198
RKLDDTEFRNP+ R I V
Sbjct: 186 RKLDDTEFRNPFERAYIRV 204
>gi|325190523|emb|CCA25022.1| premRNAsplicing factor SF2 putative [Albugo laibachii Nc14]
Length = 303
Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 93/196 (47%), Positives = 123/196 (62%), Gaps = 28/196 (14%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S+ IYVGNLP IR EVEDLFYK+G+I DI+LK+P RPP Y F++FE+ARDAEDAI
Sbjct: 1 MSKRIYVGNLPMSIRTREVEDLFYKHGKIQDIDLKLPLRPPAYAFIDFEDARDAEDAIEA 60
Query: 65 RDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
RDGY ++G RLRVE A P + ++ G + G+
Sbjct: 61 RDGYKYEGQRLRVERA------NPKNIEKEKHVRGSRSKGSNT----------------- 97
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDD 184
V V LPS SWQDLKD MRKAG+V FA++ + + G+VD+ + +DMKYAI++LDD
Sbjct: 98 --VKVTNLPSRVSWQDLKDFMRKAGEVTFAKIDKHGD---GIVDFKHHDDMKYAIKRLDD 152
Query: 185 TEFRNPWARGRITVKR 200
T+FRN + R + VK+
Sbjct: 153 TKFRNRFDRAYVRVKQ 168
>gi|307103808|gb|EFN52065.1| hypothetical protein CHLNCDRAFT_36976 [Chlorella variabilis]
Length = 302
Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 95/190 (50%), Positives = 118/190 (62%), Gaps = 20/190 (10%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNLP DIRE EVEDLF KYG+++ I++K P RPP + FVEF + RDAEDA+RGRDGY
Sbjct: 12 VYVGNLPDDIREREVEDLFSKYGKVVSIDMKAPVRPPAFAFVEFADPRDAEDAVRGRDGY 71
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+F G RLRVELA G GRG G +RV+
Sbjct: 72 DFYGNRLRVELAKGAGGRGRGFGGGPPPGFRPRQTG--------------------FRVL 111
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V+GLP SASWQDLKDH+R+ + V RD +G GVV++ +DM+ IRKLDDTEFR
Sbjct: 112 VKGLPMSASWQDLKDHVRQVCKPAYTNVFRDRDGVTGVVEFETADDMERTIRKLDDTEFR 171
Query: 189 NPWARGRITV 198
NP+ R + V
Sbjct: 172 NPFDRAYVRV 181
>gi|312074319|ref|XP_003139917.1| arginine/serine-rich splicing factor 1B [Loa loa]
gi|307764919|gb|EFO24153.1| arginine/serine-rich splicing factor 1B [Loa loa]
Length = 266
Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 109/224 (48%), Positives = 143/224 (63%), Gaps = 23/224 (10%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M+GR ++VGNLPSD+++ ++ED+FYKYGRI I++K P + FVEF++ RDA D
Sbjct: 1 MAGRRDCRVFVGNLPSDVKQRDLEDIFYKYGRINFIDIKFTRDVP-FAFVEFDDPRDARD 59
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
A+ GRDGY+FDGCR+RVEL G R YG G
Sbjct: 60 AVHGRDGYDFDGCRIRVELTRGVGP---RGPGGRPLYGPDPRSPRHGPPP---------- 106
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R S YRV++ GLP + SWQDLKDHMR AG++C+A+V RD GT GVV+YTN EDMKYA+R
Sbjct: 107 RRSGYRVVISGLPDTGSWQDLKDHMRDAGEICYADVFRD--GT-GVVEYTNYEDMKYALR 163
Query: 181 KLDDTEFRNPWARGRITVKRYDR----SPSRSRSRSRSRSRSRS 220
KLDDT+F++ G +T R SP+RSRSRS + ++RS
Sbjct: 164 KLDDTKFKS--HEGEVTYIRVREANINSPNRSRSRSYTPRKTRS 205
>gi|170591727|ref|XP_001900621.1| SF2 [Brugia malayi]
gi|158591773|gb|EDP30376.1| SF2, putative [Brugia malayi]
Length = 298
Score = 180 bits (456), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 109/224 (48%), Positives = 142/224 (63%), Gaps = 23/224 (10%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M+GR ++VGNLPSD+++ ++ED+FYKYGRI I++K P + F+EF++ RDA D
Sbjct: 1 MAGRRDCRVFVGNLPSDVKQRDLEDIFYKYGRINFIDIKFTRDVP-FAFIEFDDPRDARD 59
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
A+ GRDGY+FDGCR+RVEL G R YG G
Sbjct: 60 AVHGRDGYDFDGCRIRVELTRGVGP---RGPGGRPLYGPDSRSPRRGPPPRR-------- 108
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
S YRVIV GLP + SWQDLKDHMR AG++C+A+V RD GT GVV+YTN EDMKYA+R
Sbjct: 109 --SGYRVIVSGLPDTGSWQDLKDHMRDAGEICYADVFRD--GT-GVVEYTNYEDMKYALR 163
Query: 181 KLDDTEFRNPWARGRITVKRYDR----SPSRSRSRSRSRSRSRS 220
KLDDT+F++ G +T R SP+RSRSRS + ++RS
Sbjct: 164 KLDDTKFKS--HEGEVTYIRVKEANINSPNRSRSRSHTPRKTRS 205
>gi|11527011|gb|AAG36874.1|AF242767_1 SF2 [Caenorhabditis elegans]
Length = 258
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 104/184 (56%), Positives = 127/184 (69%), Gaps = 7/184 (3%)
Query: 6 SRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGR 65
+ +YVGNLP D+RE EVED+F+KYGRI +++K R P + FVEFE+ RDAEDA+R R
Sbjct: 8 DQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK-SGRGPAFAFVEFEDHRDAEDAVRAR 66
Query: 66 DGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
DGY FDG R+RVE G RGPS R GG G G G G R + Y
Sbjct: 67 DGYEFDGRRIRVEFTRGVGPRGPSG---RPLQDGGDHRGGDFRGGRGGGRGGGPQRRTGY 123
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
RVIV GLP + SWQDLKDHMR AGDVC+A+V+RD GT GVV++T ED+KYA+RKLDDT
Sbjct: 124 RVIVEGLPPTGSWQDLKDHMRDAGDVCYADVARD--GT-GVVEFTRYEDVKYAVRKLDDT 180
Query: 186 EFRN 189
+FR+
Sbjct: 181 KFRS 184
>gi|299469752|emb|CBN76606.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 330
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 97/190 (51%), Positives = 131/190 (68%), Gaps = 6/190 (3%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IY+GNLP D+ E +++D+FYK+GRI+DI+LK P RPP + F+ F++ARDAE+A+R RDGY
Sbjct: 4 IYIGNLPMDVTEKDMDDVFYKFGRIVDIDLKTPARPPAFGFITFQDARDAEEAVRARDGY 63
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ DG RLRVE++ GR GG+GG GG G G + +EYRVI
Sbjct: 64 DMDGSRLRVEISR---GRRDPFGMGGGGHGGRMGMPMGGGRGGFGGRGGAGFQQTEYRVI 120
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP SASWQDLKDHMRKAG+ + +V D +G G+V + +DM YA+RKLD ++FR
Sbjct: 121 VTGLPPSASWQDLKDHMRKAGEPTYTDV--DHKGG-GIVHFRTRDDMDYALRKLDGSDFR 177
Query: 189 NPWARGRITV 198
NP+ + RI+V
Sbjct: 178 NPFEKSRISV 187
>gi|348687956|gb|EGZ27770.1| hypothetical protein PHYSODRAFT_246920 [Phytophthora sojae]
Length = 838
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 103/194 (53%), Positives = 124/194 (63%), Gaps = 31/194 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNLP DIR EVED+FYKYGRI DI++K P RPP + FV+FE+ RDAEDAIRGRDGY
Sbjct: 533 VYVGNLPMDIRTREVEDIFYKYGRIRDIDVKFPSRPPAFAFVDFEDPRDAEDAIRGRDGY 592
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRF--GISRHSEYR 126
++DG RLRVE A+GG RR A G+GR+ I +Y
Sbjct: 593 DYDGARLRVEPANGG---------RR-------------ESAPRGSGRYPRNIRGTGDYT 630
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTE 186
V + LP SWQDLKD MRKAGDV F EV D G G+V+Y+N DMKYA+ KLDD+E
Sbjct: 631 VEISNLPPRVSWQDLKDFMRKAGDVVFTEV--DGRGG-GIVEYSNKRDMKYAVEKLDDSE 687
Query: 187 FR----NPWARGRI 196
FR N + R R+
Sbjct: 688 FRGRSENSYVRVRL 701
>gi|158293128|ref|XP_314469.4| AGAP010496-PA [Anopheles gambiae str. PEST]
gi|157016810|gb|EAA09889.4| AGAP010496-PA [Anopheles gambiae str. PEST]
Length = 258
Score = 177 bits (448), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 100/187 (53%), Positives = 129/187 (68%), Gaps = 14/187 (7%)
Query: 3 GRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAI 62
GR IYVGNLP DIR +++DLF+K+G++ ++LK PP + FVEFE+ARDA+DA+
Sbjct: 4 GRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADDAV 62
Query: 63 RGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAG-GAGAGAGAGRFGISR 121
+ RDGY++DG RLRVE GG GP G Y G G + + G R +R
Sbjct: 63 KARDGYDYDGYRLRVEFPRGG---GP------GSYRGSRQGNSDRNSRGGDRNNRGPPAR 113
Query: 122 HSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRK 181
S++RV+V GLPSS SWQDLKDHMR+AGDVCFA+V +D GT GVV++ EDMKYAI+K
Sbjct: 114 RSQFRVMVTGLPSSGSWQDLKDHMREAGDVCFADVYKD--GT-GVVEFLRHEDMKYAIKK 170
Query: 182 LDDTEFR 188
LDD+ FR
Sbjct: 171 LDDSRFR 177
>gi|312088410|ref|XP_003145851.1| arginine/serine-rich splicing factor 3 [Loa loa]
gi|307758983|gb|EFO18217.1| arginine/serine-rich splicing factor 3 [Loa loa]
Length = 228
Score = 176 bits (446), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 108/206 (52%), Positives = 137/206 (66%), Gaps = 10/206 (4%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+ +R +VED+F KYG++L ++LK R P + FVEFE+ARDAEDA+RGRDGY
Sbjct: 7 IYVGNLPTTVRAKDVEDIFSKYGKVLYVDLK-DRRQPYFAFVEFEDARDAEDAVRGRDGY 65
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+++G RLRVE G RGP G + A G G+ +G R + YRVI
Sbjct: 66 DYEGYRLRVEFPRGLGPRGPGGRPYDTGRNLSLSRNASGGGSSSGG------RRANYRVI 119
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP+S SWQDLKDHMR+AGDVC+ +V RD GT G+V+Y EDMKYA+RKLDDT+F+
Sbjct: 120 VSGLPASGSWQDLKDHMREAGDVCYTDVLRD--GT-GIVEYGRYEDMKYALRKLDDTKFK 176
Query: 189 NPWARGRITVKRYDRSPSRSRSRSRS 214
+ R D SR+ SRSRS
Sbjct: 177 SHEGETSYIRVREDNGESRAHSRSRS 202
>gi|410976794|ref|XP_003994798.1| PREDICTED: serine/arginine-rich splicing factor 9 [Felis catus]
Length = 340
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/186 (51%), Positives = 123/186 (66%), Gaps = 34/186 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELK-----IPPRPPCYCFVEFENARDAEDAIR 63
IYVGNLP+D+RE ++EDLFYKYGRI +IELK +P + FV FE+ RDAEDAI
Sbjct: 135 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVP-----FAFVRFEDPRDAEDAIY 189
Query: 64 GRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHS 123
GR+GY++ CRLRVE P + RGG+ GG G +R S
Sbjct: 190 GRNGYDYGQCRLRVEF--------PRTYGSRGGWPRGGRNGPP-------------TRRS 228
Query: 124 EYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLD 183
++RV+V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y EDM+YA+RKLD
Sbjct: 229 DFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKLD 285
Query: 184 DTEFRN 189
DT+FR+
Sbjct: 286 DTKFRS 291
>gi|115436242|ref|NP_001042879.1| Os01g0316600 [Oryza sativa Japonica Group]
gi|113532410|dbj|BAF04793.1| Os01g0316600, partial [Oryza sativa Japonica Group]
Length = 178
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/151 (62%), Positives = 109/151 (72%), Gaps = 15/151 (9%)
Query: 52 FENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAG 111
FE+ RDA+DAI GRDGYNFDG RLRVELAHGG G+ S DR Y G GG
Sbjct: 1 FEDPRDADDAICGRDGYNFDGYRLRVELAHGGRGQS-YSYDRPRSYSSGRRGG------- 52
Query: 112 AGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTN 171
+SR SEYRV+V GLPSSASWQDLKDHMR+AGDVCF++V R++ T G+VDYT
Sbjct: 53 -------VSRRSEYRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGATVGIVDYTT 105
Query: 172 PEDMKYAIRKLDDTEFRNPWARGRITVKRYD 202
EDMKYAIRKLDD+EFRN ++R I V+ YD
Sbjct: 106 YEDMKYAIRKLDDSEFRNAFSRAYIRVREYD 136
>gi|156545752|ref|XP_001605411.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Nasonia
vitripennis]
Length = 257
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/206 (52%), Positives = 135/206 (65%), Gaps = 13/206 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR +++DLFYK+G++ ++LK PP + FVEF++ RDAEDA+ RDGY
Sbjct: 22 IYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRRGPP-FAFVEFDDPRDAEDAVHARDGY 80
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE GG GPSSS R G G G G G G +R S+YRV+
Sbjct: 81 DYDGYRLRVEFPRGG---GPSSSFRGRGGGDSRGRGDMGNSRGRGPP----ARRSQYRVL 133
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVCFA+V +D GT GVV++ EDMKYA++KLDD+ FR
Sbjct: 134 VTGLPPSGSWQDLKDHMREAGDVCFADVYKD--GT-GVVEFLRYEDMKYAVKKLDDSRFR 190
Query: 189 NPWARGRITVKRYDRSPSRSRSRSRS 214
+ G + R S RSRS
Sbjct: 191 S--HEGEVAYIRVKEDHGGSGDRSRS 214
>gi|324504398|gb|ADY41900.1| Serine/arginine-rich splicing factor 1 [Ascaris suum]
Length = 233
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 107/206 (51%), Positives = 134/206 (65%), Gaps = 4/206 (1%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+ +R ++ED+F K+G++L ++LK RPP + FVEFE+ RDAEDA+R RDGY
Sbjct: 7 IYVGNLPTSVRTKDIEDIFTKFGKVLFVDLK-DKRPPYFAFVEFEDPRDAEDAVRSRDGY 65
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+F G RLRVE G RGP G G G G G+G R + YRVI
Sbjct: 66 DFYGYRLRVEFPRGVGPRGPGGRPLHGNDRGYSGSRGDGGYGGGGSGSRSGGRRTNYRVI 125
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP+S SWQDLKDHMR+AGDVC+A+++RD GT GVV+Y +DMKYAIRKLDDT+F+
Sbjct: 126 VTGLPTSGSWQDLKDHMREAGDVCYADITRD--GT-GVVEYARLDDMKYAIRKLDDTKFK 182
Query: 189 NPWARGRITVKRYDRSPSRSRSRSRS 214
+ R D RSRSRS
Sbjct: 183 SHEGETAYIRVREDDINGGGRSRSRS 208
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 124 EYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLD 183
E R+ V LP+S +D++D K G V F ++ + V++ +P D + A+R D
Sbjct: 4 ESRIYVGNLPTSVRTKDIEDIFTKFGKVLFVDLKDKRPPYFAFVEFEDPRDAEDAVRSRD 63
Query: 184 DTEF 187
+F
Sbjct: 64 GYDF 67
>gi|348518702|ref|XP_003446870.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Oreochromis
niloticus]
Length = 243
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 109/182 (59%), Positives = 126/182 (69%), Gaps = 19/182 (10%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR +VED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDVEDVFYKYGIIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFG-ISRHSEYRV 127
++DG RLRVE P S G GGGGA G GR+G SR SEYRV
Sbjct: 78 DYDGYRLRVEF--------PRSGRGGGRGGGGGA-------LGTPRGRYGPPSRRSEYRV 122
Query: 128 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
IV GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ EDM YAIRKLD+T+F
Sbjct: 123 IVSGLPPSGSWQDLKDHMREAGDVCYADVYRD--GT-GVVEFVRKEDMTYAIRKLDNTKF 179
Query: 188 RN 189
R+
Sbjct: 180 RS 181
>gi|82233969|sp|Q5ZML3.3|SRSF1_CHICK RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|53127294|emb|CAG31030.1| hypothetical protein RCJMB04_1l5 [Gallus gallus]
Length = 257
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 113/240 (47%), Positives = 143/240 (59%), Gaps = 18/240 (7%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG G SR SEYRVI
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGG-------------GGGGGGAPRGRYGPPSRRSEYRVI 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ EDM YA+RKLD+T+FR
Sbjct: 125 VSGLPPSGSWQDLKDHMREAGDVCYADVFRD--GT-GVVEFVRKEDMTYAVRKLDNTKFR 181
Query: 189 NPWARGRITVKRYD--RSPSRSRSRSRSRSRSRSRIVRRNRSKSLERSVSRSVSRSMSAS 246
+ + D RSPS RSRSRS + + + + + + + + ++ A+
Sbjct: 182 SHEGETAYIRVKVDGPRSPSYGRSRSRSVVVAEAVVGATAEAAVIPQEEAEDLHATLPAT 241
>gi|355718943|gb|AES06437.1| splicing factor, arginine/serine-rich 9 [Mustela putorius furo]
Length = 220
Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 95/181 (52%), Positives = 121/181 (66%), Gaps = 24/181 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+D+RE ++EDLFYKYGRI +IELK + FV FE+ RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ CRLRVE P + RGG+ GG G +R S++RV+
Sbjct: 76 DYGQCRLRVEF--------PRTYGSRGGWPRGGRNGP-------------PTRRSDFRVL 114
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y EDM+YA+RKLDDT+FR
Sbjct: 115 VSGLPPSGSWQDLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKLDDTKFR 171
Query: 189 N 189
+
Sbjct: 172 S 172
>gi|427777641|gb|JAA54272.1| Putative sf2 [Rhipicephalus pulchellus]
Length = 223
Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 97/182 (53%), Positives = 123/182 (67%), Gaps = 26/182 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++EDLFYK+G+I I+LK PP + FVEF++ RDAEDA++ RDGY
Sbjct: 10 IYVGNLPPDIRSKDIEDLFYKFGKITFIDLKNRRGPP-FAFVEFDDPRDAEDAVQARDGY 68
Query: 69 NFDGCRLRVELAHGGS-GRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRV 127
++DG RLRVE G + GRG G G GR +R S+YRV
Sbjct: 69 DYDGYRLRVEFPRGSAPGRG---------------------SMGPGRGRGPPARRSQYRV 107
Query: 128 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
+V GLP S SWQDLKDHMR+AGDVC+A+V +D GT GVV++ EDMKYA++KLDD+ F
Sbjct: 108 LVSGLPPSGSWQDLKDHMREAGDVCYADVFKD--GT-GVVEFLRYEDMKYAVKKLDDSRF 164
Query: 188 RN 189
R+
Sbjct: 165 RS 166
>gi|227206256|dbj|BAH57183.1| AT4G02430 [Arabidopsis thaliana]
Length = 176
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 97/156 (62%), Positives = 110/156 (70%), Gaps = 5/156 (3%)
Query: 26 LFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSG 85
F KYG ++ I+LKIPPRPP Y FVEFE+ARDA+DAI GRDGY+FDG LRVELAHGG
Sbjct: 24 FFLKYGPVVQIDLKIPPRPPGYAFVEFEDARDADDAIYGRDGYDFDGHHLRVELAHGGR- 82
Query: 86 RGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHM 145
S G G G G G G SR SEYRV+V GLPSSASWQDLKDHM
Sbjct: 83 ----RSSHDARGSYSGRGRGGRGGGDGGGRERGPSRRSEYRVVVSGLPSSASWQDLKDHM 138
Query: 146 RKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRK 181
RK G+VCF++V RD GT G+VDYT+ EDMKYAI+K
Sbjct: 139 RKGGEVCFSQVFRDGRGTTGIVDYTSYEDMKYAIKK 174
>gi|57105666|ref|XP_534706.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 1 [Canis
lupus familiaris]
Length = 221
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 95/181 (52%), Positives = 121/181 (66%), Gaps = 24/181 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+D+RE ++EDLFYKYGRI +IELK + FV FE+ RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ CRLRVE P + RGG+ GG G +R S++RV+
Sbjct: 76 DYGQCRLRVEF--------PRTYGSRGGWPRGGRNGP-------------PTRRSDFRVL 114
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y EDM+YA+RKLDDT+FR
Sbjct: 115 VSGLPPSGSWQDLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKLDDTKFR 171
Query: 189 N 189
+
Sbjct: 172 S 172
>gi|195996923|ref|XP_002108330.1| hypothetical protein TRIADDRAFT_49822 [Trichoplax adhaerens]
gi|190589106|gb|EDV29128.1| hypothetical protein TRIADDRAFT_49822 [Trichoplax adhaerens]
Length = 223
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 108/202 (53%), Positives = 131/202 (64%), Gaps = 17/202 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IY+GNLPSDIRE ++EDLFYKYG+IL I LK R P + FVEFE+ RDAEDAI GRDGY
Sbjct: 9 IYIGNLPSDIRERDLEDLFYKYGKILSISLKDNRRGPPFAFVEFEDKRDAEDAIDGRDGY 68
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+FDGCRLRVE P GG G G G G A R S++RVI
Sbjct: 69 DFDGCRLRVE--------APRGGGGGGGDYGRRGRGNGSGGGRGPA------RRSDHRVI 114
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP + SWQDLKDHMR+AG+V FA+V RD GT GVV++ + D+KYA++ LDD++FR
Sbjct: 115 VSGLPQTGSWQDLKDHMREAGEVYFADVYRD--GT-GVVEFAHYSDVKYALKHLDDSKFR 171
Query: 189 NPWARGRITVKRYDRSPSRSRS 210
+ + DR SRSRS
Sbjct: 172 SHEGETSYVRVKEDRGRSRSRS 193
>gi|346471975|gb|AEO35832.1| hypothetical protein [Amblyomma maculatum]
Length = 223
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 97/182 (53%), Positives = 122/182 (67%), Gaps = 26/182 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++EDLFYK+G+I I+LK PP + FVEF++ RDAEDA+ RDGY
Sbjct: 10 IYVGNLPPDIRSKDIEDLFYKFGKITFIDLKNRRGPP-FAFVEFDDPRDAEDAVHARDGY 68
Query: 69 NFDGCRLRVELAHGGS-GRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRV 127
++DG RLRVE G + GRG G G GR +R S+YRV
Sbjct: 69 DYDGYRLRVEFPRGSAPGRG---------------------SMGPGRGRGPPARRSQYRV 107
Query: 128 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
+V GLP S SWQDLKDHMR+AGDVC+A+V +D GT GVV++ EDMKYA++KLDD+ F
Sbjct: 108 LVSGLPPSGSWQDLKDHMREAGDVCYADVFKD--GT-GVVEFLRYEDMKYAVKKLDDSRF 164
Query: 188 RN 189
R+
Sbjct: 165 RS 166
>gi|325303176|tpg|DAA34416.1| TPA_inf: alternative splicing factor ASF/SF2 [Amblyomma variegatum]
Length = 222
Score = 173 bits (438), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 97/181 (53%), Positives = 121/181 (66%), Gaps = 24/181 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++EDLFYK+G+I I+LK PP + FVEF++ RDAEDA+ RDGY
Sbjct: 10 IYVGNLPPDIRSKDIEDLFYKFGKITFIDLKNRRGPP-FAFVEFDDPRDAEDAVHARDGY 68
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G A G G G G G G +R S+YRV+
Sbjct: 69 DYDGYRLRVEFPRGS------------------APGRGSMGPGRGRG--PPARRSQYRVL 108
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V +D GT GVV++ EDMKYA++KLDD+ FR
Sbjct: 109 VSGLPPSGSWQDLKDHMREAGDVCYADVFKD--GT-GVVEFLRYEDMKYAVKKLDDSRFR 165
Query: 189 N 189
+
Sbjct: 166 S 166
>gi|391330558|ref|XP_003739725.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Metaseiulus
occidentalis]
Length = 217
Score = 172 bits (437), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 98/189 (51%), Positives = 124/189 (65%), Gaps = 25/189 (13%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS + +YVGNLP DIR ++EDLF+KYG+I I+LK R P + FVEFE+ RDAED
Sbjct: 1 MSYKAESRVYVGNLPPDIRTKDIEDLFHKYGKITFIDLKNR-RGPPFAFVEFEDPRDAED 59
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
A+ RDGY++DG +LRVE G S R RGG GR +
Sbjct: 60 AVSARDGYDYDGYKLRVEFPRGNSARP------RGG---------------PSRGRGPPA 98
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R S+YRVIV GLP + SWQDLKDHMR+AGDVC+A+V +D GT GVV++ EDMKYA++
Sbjct: 99 RRSQYRVIVTGLPPTGSWQDLKDHMREAGDVCYADVYKD--GT-GVVEFLRYEDMKYAVK 155
Query: 181 KLDDTEFRN 189
KLDD+ FR+
Sbjct: 156 KLDDSRFRS 164
>gi|256092018|ref|XP_002581797.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
Length = 194
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/211 (51%), Positives = 133/211 (63%), Gaps = 25/211 (11%)
Query: 4 RFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPR-PPCYCFVEFENARDAEDAI 62
R + IYVGNLP D + ++E+LF KYG I I+LK R P + FVEFE+ DA DA+
Sbjct: 7 RTTHKIYVGNLPPDTKTRDIENLFSKYGPIAAIDLKAGQRRGPPFAFVEFEDELDASDAV 66
Query: 63 RGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRH 122
RGRDGYNFDG LRVEL G +RR GGGGA G SR
Sbjct: 67 RGRDGYNFDGYALRVELPRTGV------PERRFNRGGGGASGP--------------SRR 106
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKL 182
S++RVIV GLP + SWQDLKDHMR+AGDV +A+V RD GT GVV++ EDMKYAIR+L
Sbjct: 107 SDFRVIVTGLPPTGSWQDLKDHMREAGDVGYADVFRD--GT-GVVEFLRYEDMKYAIRRL 163
Query: 183 DDTEFRNPWARGRITVKRYDRS-PSRSRSRS 212
DD++FR+ R +R+ SRSRSRS
Sbjct: 164 DDSKFRSHEGESSYIRVREERAGGSRSRSRS 194
>gi|289739445|gb|ADD18470.1| alternative splicing factor ASF/SF2 [Glossina morsitans morsitans]
Length = 236
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 100/188 (53%), Positives = 129/188 (68%), Gaps = 11/188 (5%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M R IYVGNLP DIR +++DLF+K+G++ ++LK PP + FVEFE+ARDA+D
Sbjct: 1 MGSRNESRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADD 59
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
A++ RDGY++DG RLRVE GG GR ++R G G G G GR +
Sbjct: 60 AVKARDGYDYDGYRLRVEFPRGG-GRNEHRNNR------GNERGNQREGGRGGGGRGPPT 112
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
+ S+YRV+V GLPSS SWQDLKDHMR+AGDVCFA+ +D GT GVV++ EDMKYAI+
Sbjct: 113 KRSQYRVLVTGLPSSGSWQDLKDHMREAGDVCFADTYKD--GT-GVVEFLRHEDMKYAIK 169
Query: 181 KLDDTEFR 188
KLDD+ FR
Sbjct: 170 KLDDSRFR 177
>gi|13385016|ref|NP_079849.1| serine/arginine-rich splicing factor 9 [Mus musculus]
gi|66774167|sp|Q9D0B0.1|SRSF9_MOUSE RecName: Full=Serine/arginine-rich splicing factor 9; AltName:
Full=Splicing factor, arginine/serine-rich 9
gi|12847866|dbj|BAB27740.1| unnamed protein product [Mus musculus]
gi|15126569|gb|AAH12217.1| Splicing factor, arginine/serine rich 9 [Mus musculus]
gi|148687919|gb|EDL19866.1| splicing factor, arginine/serine rich 9, isoform CRA_b [Mus
musculus]
Length = 222
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/181 (52%), Positives = 120/181 (66%), Gaps = 24/181 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLPSD+RE ++EDLFYKYGRI +IELK + FV FE+ RDAEDAI GR+GY
Sbjct: 17 IYVGNLPSDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 76
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ CRLRVE P + RGG+ G G +R S++RV+
Sbjct: 77 DYGQCRLRVEF--------PRTYGGRGGWPRGARNGP-------------PTRRSDFRVL 115
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y EDM+YA+RKLDDT+FR
Sbjct: 116 VSGLPPSGSWQDLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKLDDTKFR 172
Query: 189 N 189
+
Sbjct: 173 S 173
>gi|170588713|ref|XP_001899118.1| SF2 [Brugia malayi]
gi|158593331|gb|EDP31926.1| SF2, putative [Brugia malayi]
Length = 228
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/206 (51%), Positives = 135/206 (65%), Gaps = 10/206 (4%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+ +R +VED+F KYGR+L ++LK R P + FVEFE+ARDAEDA+RGRDGY
Sbjct: 7 IYVGNLPTTVRAKDVEDIFSKYGRVLYVDLK-DRRQPYFAFVEFEDARDAEDAVRGRDGY 65
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+++G RLRVE G RGP G + + G G SR + YRVI
Sbjct: 66 DYEGYRLRVEFPRGLGPRGPGGRPYDSG------RNLSVSRSAGGGGSSSGSRRANYRVI 119
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP+S SWQDLKDHMR+AGDVC+ +V RD GT G+V+Y EDMKYA+RKLDDT+F+
Sbjct: 120 VSGLPASGSWQDLKDHMREAGDVCYTDVLRD--GT-GIVEYGRYEDMKYALRKLDDTKFK 176
Query: 189 NPWARGRITVKRYDRSPSRSRSRSRS 214
+ + D SR+ SRSRS
Sbjct: 177 SHEGETSYIRVKEDNGESRAHSRSRS 202
>gi|74192738|dbj|BAE34886.1| unnamed protein product [Mus musculus]
Length = 222
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/181 (52%), Positives = 120/181 (66%), Gaps = 24/181 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLPSD+RE ++EDLFYKYGRI +IELK + FV FE+ RDAEDAI GR+GY
Sbjct: 17 IYVGNLPSDVRERDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 76
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ CRLRVE P + RGG+ G G +R S++RV+
Sbjct: 77 DYGQCRLRVEF--------PRTYGGRGGWPRGARNGP-------------PTRRSDFRVL 115
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y EDM+YA+RKLDDT+FR
Sbjct: 116 VSGLPPSGSWQDLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKLDDTKFR 172
Query: 189 N 189
+
Sbjct: 173 S 173
>gi|198432543|ref|XP_002131859.1| PREDICTED: similar to splicing factor, arginine/serine-rich 1
[Ciona intestinalis]
Length = 235
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/180 (53%), Positives = 123/180 (68%), Gaps = 20/180 (11%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNLP D+RE +VEDLFYKYG I + LK PP + FVEFE+ RDAED++ GR+GY
Sbjct: 11 VYVGNLPPDVREKDVEDLFYKYGSIRHVNLKNRRGPP-FAFVEFEDRRDAEDSVHGRNGY 69
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
NFDG +LRVE G GPS +R YG GG SR +++RV+
Sbjct: 70 NFDGYKLRVEHPRGN---GPS---QRPAYGMSSFRARGGPP----------SRRTDFRVM 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP + SWQDLKDHMR+AGDVC+A+V RD GT GVV++ N +DM++A++ LDDT+FR
Sbjct: 114 VSGLPPTGSWQDLKDHMREAGDVCYADVYRD--GT-GVVEFVNRDDMQFAVKHLDDTKFR 170
>gi|301790878|ref|XP_002930446.1| PREDICTED: splicing factor, arginine/serine-rich 9-like [Ailuropoda
melanoleuca]
Length = 253
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/181 (51%), Positives = 120/181 (66%), Gaps = 24/181 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+D+RE ++EDLFYKYGRI +IELK + FV FE+ RDAEDAI GR+GY
Sbjct: 48 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 107
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ CRLRVE P + R G+ GG G +R S++RV+
Sbjct: 108 DYGQCRLRVEF--------PRTYGGRAGWPRGGRNGPP-------------TRRSDFRVL 146
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y EDM+YA+RKLDDT+FR
Sbjct: 147 VSGLPPSGSWQDLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKLDDTKFR 203
Query: 189 N 189
+
Sbjct: 204 S 204
>gi|324504146|gb|ADY41791.1| Splicing factor, arginine/serine-rich 3 [Ascaris suum]
Length = 215
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/192 (52%), Positives = 129/192 (67%), Gaps = 4/192 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+ +R ++ED+F K+G++L ++LK RPP + FVEFE+ RDAEDA+R RDGY
Sbjct: 7 IYVGNLPTSVRTKDIEDIFTKFGKVLFVDLK-DKRPPYFAFVEFEDPRDAEDAVRSRDGY 65
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+F G RLRVE G RGP G G G G G+G R + YRVI
Sbjct: 66 DFYGYRLRVEFPRGVGPRGPGGRPLHGNDRGYSGSRGDGGYGGGGSGSRSGGRRTNYRVI 125
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP+S SWQDLKDHMR+AGDVC+A+++RD GT GVV+Y +DMKYAIRKLDDT+F+
Sbjct: 126 VTGLPTSGSWQDLKDHMREAGDVCYADITRD--GT-GVVEYARLDDMKYAIRKLDDTKFK 182
Query: 189 NPWARGRITVKR 200
+ +G R
Sbjct: 183 SHEFQGETAYIR 194
Score = 37.0 bits (84), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 124 EYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLD 183
E R+ V LP+S +D++D K G V F ++ + V++ +P D + A+R D
Sbjct: 4 ESRIYVGNLPTSVRTKDIEDIFTKFGKVLFVDLKDKRPPYFAFVEFEDPRDAEDAVRSRD 63
Query: 184 DTEF 187
+F
Sbjct: 64 GYDF 67
>gi|281340832|gb|EFB16416.1| hypothetical protein PANDA_020890 [Ailuropoda melanoleuca]
Length = 215
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 94/181 (51%), Positives = 120/181 (66%), Gaps = 24/181 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+D+RE ++EDLFYKYGRI +IELK + FV FE+ RDAEDAI GR+GY
Sbjct: 10 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 69
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ CRLRVE P + R G+ GG G +R S++RV+
Sbjct: 70 DYGQCRLRVEF--------PRTYGGRAGWPRGGRNGP-------------PTRRSDFRVL 108
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y EDM+YA+RKLDDT+FR
Sbjct: 109 VSGLPPSGSWQDLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKLDDTKFR 165
Query: 189 N 189
+
Sbjct: 166 S 166
>gi|170045710|ref|XP_001850441.1| arginine/serine-rich splicing factor [Culex quinquefasciatus]
gi|167868651|gb|EDS32034.1| arginine/serine-rich splicing factor [Culex quinquefasciatus]
Length = 241
Score = 170 bits (431), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 101/187 (54%), Positives = 128/187 (68%), Gaps = 7/187 (3%)
Query: 2 SGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDA 61
SGR IYVGNLP DIR +++DLF+K+G++ ++LK PP + FVEFE+ RDA+DA
Sbjct: 3 SGRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDNRDADDA 61
Query: 62 IRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISR 121
++ RDGY++DG RLRVE GG GP S G G GG G R +R
Sbjct: 62 VKARDGYDYDGYRLRVEFPRGG---GPGSYRGSRGSTSGDRGGGSSGRDRGGNNRGPPAR 118
Query: 122 HSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRK 181
S++RV+V GLP+S SWQDLKDHMR+AGDVCFA+V +D GT GVV+Y EDMKYAI+K
Sbjct: 119 RSQFRVVVTGLPASGSWQDLKDHMREAGDVCFADVYKD--GT-GVVEYLRHEDMKYAIKK 175
Query: 182 LDDTEFR 188
LDD+ FR
Sbjct: 176 LDDSRFR 182
>gi|57164147|ref|NP_001009255.1| serine/arginine-rich splicing factor 9 [Rattus norvegicus]
gi|92058728|sp|Q5PPI1.1|SRSF9_RAT RecName: Full=Serine/arginine-rich splicing factor 9; AltName:
Full=Splicing factor, arginine/serine-rich 9
gi|56388745|gb|AAH87684.1| Splicing factor, arginine/serine rich 9 [Rattus norvegicus]
gi|149063569|gb|EDM13892.1| splicing factor, arginine/serine rich 9, isoform CRA_b [Rattus
norvegicus]
Length = 221
Score = 170 bits (431), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 96/183 (52%), Positives = 122/183 (66%), Gaps = 28/183 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+D+RE ++EDLFYKYGRI +IELK + FV FE+ RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGCRLRVEL--AHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
++ CRLRVE A+GG G P +S R G +R S++R
Sbjct: 76 DYGQCRLRVEFPRAYGGRGGWPRAS--RNG---------------------PPTRRSDFR 112
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTE 186
V+V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y EDM+YA+RKLDDT+
Sbjct: 113 VLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKLDDTK 169
Query: 187 FRN 189
FR+
Sbjct: 170 FRS 172
>gi|195038647|ref|XP_001990768.1| GH18077 [Drosophila grimshawi]
gi|193894964|gb|EDV93830.1| GH18077 [Drosophila grimshawi]
Length = 252
Score = 170 bits (430), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 97/188 (51%), Positives = 124/188 (65%), Gaps = 13/188 (6%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M R IYVGNLP DIR +++DLF+K+G++ ++LK PP + FVEFE+ARDA+D
Sbjct: 1 MGSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADD 59
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
A++ RDGY++DG RLRVE GG GP G Y G G G GR +
Sbjct: 60 AVKARDGYDYDGYRLRVEFPRGG---GP------GSYRGNNRNDRSRDGGGRMGGRGPPA 110
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
+ S+YRV+V GLP S SWQDLKDHMR+AGDVCFA+ +D GVV++ EDMKYAI+
Sbjct: 111 KRSQYRVMVTGLPGSGSWQDLKDHMREAGDVCFADTYKDGS---GVVEFLRHEDMKYAIK 167
Query: 181 KLDDTEFR 188
KLDD+ FR
Sbjct: 168 KLDDSRFR 175
>gi|195110201|ref|XP_001999670.1| GI24651 [Drosophila mojavensis]
gi|193916264|gb|EDW15131.1| GI24651 [Drosophila mojavensis]
Length = 246
Score = 170 bits (430), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 97/188 (51%), Positives = 124/188 (65%), Gaps = 13/188 (6%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M R IYVGNLP DIR +++DLF+K+G++ ++LK PP + FVEFE+ARDA+D
Sbjct: 1 MGSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADD 59
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
A++ RDGY++DG RLRVE GG GP G Y G G G GR +
Sbjct: 60 AVKARDGYDYDGYRLRVEFPRGG---GP------GSYRGNNRNDRSRDGGGRMGGRGPPA 110
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
+ S+YRV+V GLP S SWQDLKDHMR+AGDVCFA+ +D GVV++ EDMKYAI+
Sbjct: 111 KRSQYRVMVTGLPGSGSWQDLKDHMREAGDVCFADTYKDGS---GVVEFLRHEDMKYAIK 167
Query: 181 KLDDTEFR 188
KLDD+ FR
Sbjct: 168 KLDDSRFR 175
>gi|195388956|ref|XP_002053144.1| GJ23504 [Drosophila virilis]
gi|194151230|gb|EDW66664.1| GJ23504 [Drosophila virilis]
Length = 247
Score = 170 bits (430), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 97/188 (51%), Positives = 124/188 (65%), Gaps = 13/188 (6%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M R IYVGNLP DIR +++DLF+K+G++ ++LK PP + FVEFE+ARDA+D
Sbjct: 1 MGSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADD 59
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
A++ RDGY++DG RLRVE GG GP G Y G G G GR +
Sbjct: 60 AVKARDGYDYDGYRLRVEFPRGG---GP------GSYRGNNRNDRSRDGGGRMGGRGPPA 110
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
+ S+YRV+V GLP S SWQDLKDHMR+AGDVCFA+ +D GVV++ EDMKYAI+
Sbjct: 111 KRSQYRVMVTGLPGSGSWQDLKDHMREAGDVCFADTYKDGS---GVVEFLRHEDMKYAIK 167
Query: 181 KLDDTEFR 188
KLDD+ FR
Sbjct: 168 KLDDSRFR 175
>gi|432889874|ref|XP_004075374.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Oryzias
latipes]
Length = 245
Score = 170 bits (430), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 100/182 (54%), Positives = 121/182 (66%), Gaps = 20/182 (10%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR +VED+FYKYG I DI+LK P + F+EFE+ RDA+DA+ GRDGY
Sbjct: 16 IYVGNLPPDIRTKDVEDVFYKYGTIRDIDLKNRRGGPPFAFIEFEDPRDADDAVYGRDGY 75
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFG-ISRHSEYRV 127
++DG RLRVE G G GA GR+G SR SEYRV
Sbjct: 76 DYDGYRLRVEFPRSGRGSRGGFG----------------GIGGAPRGRYGPPSRRSEYRV 119
Query: 128 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
+V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ EDM YA+RKLD+T+F
Sbjct: 120 VVSGLPQSGSWQDLKDHMREAGDVCYADVYRD--GT-GVVEFVRKEDMTYAVRKLDNTKF 176
Query: 188 RN 189
R+
Sbjct: 177 RS 178
>gi|348505538|ref|XP_003440318.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Oreochromis
niloticus]
Length = 244
Score = 169 bits (429), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 100/182 (54%), Positives = 121/182 (66%), Gaps = 21/182 (11%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR +VED+FYKYG I DI+LK P + F+EFE+ RDA+DA+ GRDGY
Sbjct: 16 IYVGNLPPDIRTKDVEDVFYKYGTIRDIDLKNRRGGPPFAFIEFEDPRDADDAVYGRDGY 75
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFG-ISRHSEYRV 127
++DG RLRVE G G GA GR+G SR SEYRV
Sbjct: 76 DYDGYRLRVEFPRSGR-----------------GSRGGFGIGGAPRGRYGPPSRRSEYRV 118
Query: 128 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
+V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ EDM YA+RKLD+T+F
Sbjct: 119 VVSGLPQSGSWQDLKDHMREAGDVCYADVYRD--GT-GVVEFVRKEDMTYAVRKLDNTKF 175
Query: 188 RN 189
R+
Sbjct: 176 RS 177
>gi|410910210|ref|XP_003968583.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Takifugu
rubripes]
gi|47227796|emb|CAG08959.1| unnamed protein product [Tetraodon nigroviridis]
Length = 245
Score = 169 bits (429), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 100/182 (54%), Positives = 121/182 (66%), Gaps = 20/182 (10%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR +VED+FYKYG I DI+LK P + F+EFE+ RDA+DA+ GRDGY
Sbjct: 16 IYVGNLPPDIRTKDVEDVFYKYGTIRDIDLKNRRGGPPFAFIEFEDPRDADDAVYGRDGY 75
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFG-ISRHSEYRV 127
++DG RLRVE G G GA GR+G SR SEYRV
Sbjct: 76 DYDGYRLRVEFPRSGRGSRGGFG----------------GIGGAPRGRYGPPSRRSEYRV 119
Query: 128 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
+V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ EDM YA+RKLD+T+F
Sbjct: 120 LVSGLPQSGSWQDLKDHMREAGDVCYADVYRD--GT-GVVEFVRKEDMTYAVRKLDNTKF 176
Query: 188 RN 189
R+
Sbjct: 177 RS 178
>gi|25150290|ref|NP_499649.2| Protein RSP-3 [Caenorhabditis elegans]
gi|56749665|sp|Q9NEW6.2|RSP3_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 3;
AltName: Full=CeSF2; AltName: Full=CeSF2/ASF
gi|21615505|emb|CAC35847.2| Protein RSP-3 [Caenorhabditis elegans]
Length = 258
Score = 169 bits (429), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 102/184 (55%), Positives = 126/184 (68%), Gaps = 7/184 (3%)
Query: 6 SRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGR 65
+ +YVGNLP D+RE EVED+F+KYGRI +++K R P + FVEFE+ RDAEDA+R R
Sbjct: 8 DQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK-SGRGPAFAFVEFEDHRDAEDAVRAR 66
Query: 66 DGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
DGY FDG R+RVE G RGP + G G G G G G R + Y
Sbjct: 67 DGYEFDGRRIRVEFTRGVGPRGPGGRPLQDG---GDHRGGDFRGGRGGGRGGGPQRRTGY 123
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
RVIV GLP + SWQDLKDHMR AGDVC+A+V+RD GT GVV++T ED+KYA+RKLDDT
Sbjct: 124 RVIVEGLPPTGSWQDLKDHMRDAGDVCYADVARD--GT-GVVEFTRYEDVKYAVRKLDDT 180
Query: 186 EFRN 189
+FR+
Sbjct: 181 KFRS 184
>gi|324500331|gb|ADY40159.1| Splicing factor, arginine/serine-rich 3 [Ascaris suum]
Length = 244
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/189 (52%), Positives = 125/189 (66%), Gaps = 11/189 (5%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M R IY+GNLPSD+++ ++EDLFYKYGRI I++K+ P + F+EF++ RDA D
Sbjct: 1 MGSRRESRIYIGNLPSDVKQRDLEDLFYKYGRINYIDIKLSRGAP-FAFIEFDDPRDARD 59
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
A+ GRDGY+ DGCR+RVE+ G RGP A A R
Sbjct: 60 AVHGRDGYDMDGCRIRVEMTRGVGPRGPGGRPLY-------ASERDRDRRPPPAPRGPPP 112
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R S YRVIV GLPSS SWQDLKDHMR AGD+C+A+V RD GT GVV+YT +DMKYAIR
Sbjct: 113 RRSGYRVIVSGLPSSGSWQDLKDHMRDAGDICYADVYRD--GT-GVVEYTKYDDMKYAIR 169
Query: 181 KLDDTEFRN 189
KLDDT+F++
Sbjct: 170 KLDDTKFKS 178
>gi|432113649|gb|ELK35931.1| Vascular endothelial zinc finger 1 [Myotis davidii]
Length = 688
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/184 (55%), Positives = 121/184 (65%), Gaps = 24/184 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKI----PPRPPCYCFVEFENARDAEDAIRG 64
IYVGNLP DIR ++ED+FYKYG I DI+LK PP + FVEFE+ RDAEDA+ G
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPP----FAFVEFEDPRDAEDAVYG 73
Query: 65 RDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
RDGY++DG RLRVE R G G G GG GG G SR SE
Sbjct: 74 RDGYDYDGYRLRVEFP-------------RSGRGTGRGGGGGGGGGAPRGRYGPPSRRSE 120
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDD 184
RV+V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ EDM YA+RKLD+
Sbjct: 121 NRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD--GT-GVVEFVRKEDMTYAVRKLDN 177
Query: 185 TEFR 188
T+FR
Sbjct: 178 TKFR 181
>gi|195152782|ref|XP_002017315.1| GL22249 [Drosophila persimilis]
gi|198454070|ref|XP_001359460.2| GA20008 [Drosophila pseudoobscura pseudoobscura]
gi|194112372|gb|EDW34415.1| GL22249 [Drosophila persimilis]
gi|198132637|gb|EAL28606.2| GA20008 [Drosophila pseudoobscura pseudoobscura]
Length = 263
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/188 (51%), Positives = 124/188 (65%), Gaps = 13/188 (6%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M R IYVGNLP DIR +++DLF+K+G++ ++LK PP + FVEFE+ARDA+D
Sbjct: 1 MGSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADD 59
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
A++ RDGY++DG RLRVE GG GP G Y G G G GR +
Sbjct: 60 AVKARDGYDYDGYRLRVEFPRGG---GP------GSYRGNRNDRNNGRDGGRMGGRGPPA 110
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
+ S+YRV+V GLP S SWQDLKDHMR+AGDVCFA+ +D GVV++ EDMKYAI+
Sbjct: 111 KRSQYRVMVTGLPPSGSWQDLKDHMREAGDVCFADTYKDGS---GVVEFLRHEDMKYAIK 167
Query: 181 KLDDTEFR 188
KLDD+ FR
Sbjct: 168 KLDDSRFR 175
>gi|260833614|ref|XP_002611807.1| hypothetical protein BRAFLDRAFT_243385 [Branchiostoma floridae]
gi|229297179|gb|EEN67816.1| hypothetical protein BRAFLDRAFT_243385 [Branchiostoma floridae]
Length = 177
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/180 (53%), Positives = 118/180 (65%), Gaps = 26/180 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I I+LK PP + FVEF++ RDAEDA+RGRDGY
Sbjct: 10 IYVGNLPPDIRVKDIEDIFYKYGNIRHIDLKNKRGPP-FAFVEFDDKRDAEDAVRGRDGY 68
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
N+DG RLRVE G G G SR SEYRV+
Sbjct: 69 NYDGYRLRVEFP----------------------RGTSRGGYRGGRRVGQPSRRSEYRVL 106
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP + SWQDLKDHMR+AGDVC+A+V RD GT GVV++ N EDMKYA+++LDD++FR
Sbjct: 107 VSGLPPTGSWQDLKDHMREAGDVCYADVFRD--GT-GVVEFLNYEDMKYAVKQLDDSKFR 163
>gi|47086241|ref|NP_998064.1| splicing factor, arginine/serine-rich 9 [Danio rerio]
gi|45501375|gb|AAH67134.1| Zgc:77449 [Danio rerio]
Length = 244
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 98/181 (54%), Positives = 121/181 (66%), Gaps = 17/181 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP D++E ++EDLF+KYG+I DIELK + FV FE+ RDAEDA+ GR+GY
Sbjct: 6 IYVGNLPMDVQERDIEDLFFKYGKIRDIELKNNRSTIPFAFVRFEDPRDAEDAVFGRNGY 65
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
F C+LRVE P SS G +G AGG G G +R SE+RVI
Sbjct: 66 GFGDCKLRVEY--------PRSS------GSKFSGPAGGGGGGPRGRFGPPTRRSEFRVI 111
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP + SWQDLKDHMR+AGDVCFA+V RD E GVV++ EDM+YA+R+LD TEFR
Sbjct: 112 VTGLPPTGSWQDLKDHMREAGDVCFADVQRDGE---GVVEFLRREDMEYALRRLDSTEFR 168
Query: 189 N 189
+
Sbjct: 169 S 169
>gi|291228500|ref|XP_002734208.1| PREDICTED: splicing factor, arginine/serine-rich 1-like isoform 2
[Saccoglossus kowalevskii]
Length = 244
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 108/180 (60%), Positives = 126/180 (70%), Gaps = 4/180 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG ILDI+LK PP + FVEFE+ RDAEDA+RGRDGY
Sbjct: 16 IYVGNLPPDIRVKDIEDIFYKYGNILDIDLKNRRGPP-FSFVEFEDKRDAEDAVRGRDGY 74
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE GG G GG GGGG GG G G +R SEYR +
Sbjct: 75 DYDGYRLRVEFPRGGRAGGGPPRGIGGGGGGGGGGGGGLGGGPGRGRGGPPARRSEYRCL 134
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP + SWQDLKDHMR+AGDVCFA+V RD GT GVV++ EDMKYA + LDDT+FR
Sbjct: 135 VSGLPPTGSWQDLKDHMREAGDVCFADVYRD--GT-GVVEFLRYEDMKYAAKHLDDTKFR 191
>gi|357631525|gb|EHJ78995.1| hypothetical protein KGM_15683 [Danaus plexippus]
Length = 249
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 94/181 (51%), Positives = 121/181 (66%), Gaps = 16/181 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR +++DLFYK+G++ ++LK PP + FVEFE+ RDA+DA+R RDGY
Sbjct: 14 IYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRKGPP-FAFVEFEDPRDADDAVRARDGY 72
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE GG G + +G A R +R SEYRV+
Sbjct: 73 DYDGYRLRVEFPRGGGGGARGGRSQPDRFGP------------RPAARGPPARRSEYRVL 120
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVCFA+ +D GT GVV++ EDMKYA++KLDD+ FR
Sbjct: 121 VTGLPPSGSWQDLKDHMREAGDVCFADTFKD--GT-GVVEFLRHEDMKYAVKKLDDSRFR 177
Query: 189 N 189
+
Sbjct: 178 S 178
>gi|45433540|ref|NP_956887.2| serine/arginine-rich splicing factor 1B [Danio rerio]
gi|71162369|sp|Q6NYA0.1|SRS1B_DANRE RecName: Full=Serine/arginine-rich splicing factor 1B; AltName:
Full=Splicing factor, arginine/serine-rich 1; AltName:
Full=Splicing factor, arginine/serine-rich 1B
gi|44890669|gb|AAH66682.1| Splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor) [Danio rerio]
Length = 245
Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 102/181 (56%), Positives = 119/181 (65%), Gaps = 16/181 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR +VED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 17 IYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 76
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G G G G SR SEYRVI
Sbjct: 77 DYDGYRLRVEFPRSGRGGGRGGGGGGGVGAPRGRYGPP-------------SRRSEYRVI 123
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ EDM YA+RKLD+T+FR
Sbjct: 124 VSGLPPSGSWQDLKDHMREAGDVCYADVFRD--GT-GVVEFVRKEDMTYAVRKLDNTKFR 180
Query: 189 N 189
+
Sbjct: 181 S 181
>gi|291228498|ref|XP_002734207.1| PREDICTED: splicing factor, arginine/serine-rich 1-like isoform 1
[Saccoglossus kowalevskii]
Length = 230
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 101/181 (55%), Positives = 120/181 (66%), Gaps = 18/181 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG ILDI+LK PP + FVEFE+ RDAEDA+RGRDGY
Sbjct: 16 IYVGNLPPDIRVKDIEDIFYKYGNILDIDLKNRRGPP-FSFVEFEDKRDAEDAVRGRDGY 74
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE GG G G G G +R SEYR +
Sbjct: 75 DYDGYRLRVEFPRGGGGGGGGGG--------------GLGGGPGRGRGGPPARRSEYRCL 120
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP + SWQDLKDHMR+AGDVCFA+V RD GT GVV++ EDMKYA + LDDT+FR
Sbjct: 121 VSGLPPTGSWQDLKDHMREAGDVCFADVYRD--GT-GVVEFLRYEDMKYAAKHLDDTKFR 177
Query: 189 N 189
+
Sbjct: 178 S 178
>gi|324512727|gb|ADY45260.1| Splicing factor, arginine/serine-rich 3 [Ascaris suum]
Length = 242
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 96/181 (53%), Positives = 125/181 (69%), Gaps = 13/181 (7%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNLPS++++ ++EDLF KYGRI I++K P + F+EFE++RDAEDAIRGRDGY
Sbjct: 9 VYVGNLPSNVKQRDLEDLFDKYGRICFIDVKYSRGAP-FAFLEFEDSRDAEDAIRGRDGY 67
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ DGCR+RVE+ G RGP GG G A +G YRVI
Sbjct: 68 DLDGCRIRVEMTRGVGPRGPGGRPIYGGGGYDRRPPAPRGPPVRRSG---------YRVI 118
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
+ GLP+S SWQDLKDHMR AGD+C+A+V +D GT GVV+YT +DMKYA+RKLDDT+F+
Sbjct: 119 ISGLPASGSWQDLKDHMRDAGDICYADVYKD--GT-GVVEYTKYDDMKYAVRKLDDTKFK 175
Query: 189 N 189
+
Sbjct: 176 S 176
>gi|308490885|ref|XP_003107634.1| CRE-RSP-3 protein [Caenorhabditis remanei]
gi|308250503|gb|EFO94455.1| CRE-RSP-3 protein [Caenorhabditis remanei]
Length = 262
Score = 167 bits (422), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 105/184 (57%), Positives = 129/184 (70%), Gaps = 4/184 (2%)
Query: 6 SRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGR 65
+ +YVGNLP D+RE EVED+F+KYGRI I++K R P + FVEFE+ RDAEDA+R R
Sbjct: 8 DQKVYVGNLPGDVREKEVEDIFHKYGRIKYIDIK-SGRGPAFAFVEFEDHRDAEDAVRAR 66
Query: 66 DGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
DGY FDG R+RVE G RGP GG GG G G G G G R + Y
Sbjct: 67 DGYEFDGRRIRVEFTRGVGPRGPGGRPLNEEGGGYRGGGDFRGGRGGGRGGGGPQRRTGY 126
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
RVIV GLP + SWQDLKDHMR+AGDVC+A+V+RD GT GVV++T +D+KYA+RKLDDT
Sbjct: 127 RVIVEGLPPTGSWQDLKDHMREAGDVCYADVARD--GT-GVVEFTRYDDVKYAVRKLDDT 183
Query: 186 EFRN 189
+FR+
Sbjct: 184 KFRS 187
>gi|194744791|ref|XP_001954876.1| GF16525 [Drosophila ananassae]
gi|190627913|gb|EDV43437.1| GF16525 [Drosophila ananassae]
Length = 253
Score = 167 bits (422), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 98/188 (52%), Positives = 123/188 (65%), Gaps = 15/188 (7%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M R IYVGNLP DIR +++DLF+K+G++ ++LK PP + FVEFE+ARDA+D
Sbjct: 1 MGSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADD 59
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
A++ RDGY++DG RLRVE GG GP S RG G G G A R
Sbjct: 60 AVKARDGYDYDGYRLRVEFPRGG---GPGSY--RGNRNDRSRDGGRMGGRGPPAKR---- 110
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
S+YRV+V GLP S SWQDLKDHMR+AGDVCFA+ +D GVV++ EDMKYAI+
Sbjct: 111 --SQYRVMVTGLPGSGSWQDLKDHMREAGDVCFADTYKDGS---GVVEFLRHEDMKYAIK 165
Query: 181 KLDDTEFR 188
KLDD+ FR
Sbjct: 166 KLDDSRFR 173
>gi|34785174|gb|AAH56752.1| Sfrs1 protein [Danio rerio]
Length = 188
Score = 167 bits (422), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 102/181 (56%), Positives = 119/181 (65%), Gaps = 16/181 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR +VED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 17 IYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 76
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G G G G SR SEYRVI
Sbjct: 77 DYDGYRLRVEFPRSGRGGGRGGGGGGGVGAPRGRYGPP-------------SRRSEYRVI 123
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ EDM YA+RKLD+T+FR
Sbjct: 124 VSGLPPSGSWQDLKDHMREAGDVCYADVFRD--GT-GVVEFVRKEDMTYAVRKLDNTKFR 180
Query: 189 N 189
+
Sbjct: 181 S 181
>gi|159155810|gb|AAI54584.1| Zgc:77449 protein [Danio rerio]
Length = 246
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 96/181 (53%), Positives = 118/181 (65%), Gaps = 15/181 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP D++E ++EDLF+KYG+I DIELK + FV FE+ RDAEDA+ GR+GY
Sbjct: 6 IYVGNLPMDVQERDIEDLFFKYGKIRDIELKNNRSTIPFAFVRFEDPRDAEDAVFGRNGY 65
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
F C+LRVE R G G G GG G G +R SE+RVI
Sbjct: 66 GFGDCKLRVEYP------------RSSGSKFSGPAGGGGGGGGPRGRFGPPTRRSEFRVI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP + SWQDLKDHMR+AGDVCFA+V RD E GVV++ EDM+YA+R+LD TEFR
Sbjct: 114 VTGLPPTGSWQDLKDHMREAGDVCFADVQRDGE---GVVEFLRREDMEYALRRLDSTEFR 170
Query: 189 N 189
+
Sbjct: 171 S 171
>gi|172046470|emb|CAQ34907.1| ASF/SF2 protein [Chironomus tentans]
Length = 246
Score = 166 bits (421), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 96/180 (53%), Positives = 122/180 (67%), Gaps = 13/180 (7%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR +VEDLF+++G++ ++LK PP + FVEFE+ RDA DA++ R Y
Sbjct: 11 IYVGNLPPDIRTKDVEDLFFRFGKVSFVDLKNRRGPP-FVFVEFEDHRDASDAVKARSNY 69
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG +LRVE GG GP SS R G + G G +R S+YRV+
Sbjct: 70 DYDGYKLRVEFPRGG---GPGSSYR------GRSNNDRGGSGRGGGNNRPAARRSQYRVL 120
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLPSS SWQDLKDHMR+AGDVCFA+V +D GT GVV++ EDMKYAI+KLDD+ FR
Sbjct: 121 VSGLPSSGSWQDLKDHMREAGDVCFADVYKD--GT-GVVEFLRYEDMKYAIKKLDDSRFR 177
>gi|170591729|ref|XP_001900622.1| SF2 [Brugia malayi]
gi|158591774|gb|EDP30377.1| SF2, putative [Brugia malayi]
Length = 277
Score = 166 bits (421), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 97/189 (51%), Positives = 125/189 (66%), Gaps = 12/189 (6%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M+GR +Y+GNLP DIR+ ++EDLFYKYG I I++K+ P + F+EF++ RDA D
Sbjct: 41 MAGRRDCRVYIGNLPPDIRQRDLEDLFYKYGHINFIDVKLTRGAP-FAFIEFDDPRDARD 99
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGY DGCR+RVE+ G RGP G G G
Sbjct: 100 AIRGRDGYELDGCRIRVEMTRGVGPRGPGGRPL--------YGPDRGERDRRPPPPRGPP 151
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R S YRV+V GLP + SWQDLKDHMR+AGD+C+A+V +D GT GVV+YT +DMKYAI+
Sbjct: 152 RRSGYRVLVTGLPVTGSWQDLKDHMREAGDICYADVFKD--GT-GVVEYTRQDDMKYAIK 208
Query: 181 KLDDTEFRN 189
KLDDT+F++
Sbjct: 209 KLDDTKFKS 217
>gi|402587972|gb|EJW81906.1| splicing factor [Wuchereria bancrofti]
Length = 228
Score = 166 bits (420), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 107/206 (51%), Positives = 135/206 (65%), Gaps = 10/206 (4%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+ +R +VED+F KYGR+L ++LK R P + FVEFE+ARDAEDA+RGRDGY
Sbjct: 7 IYVGNLPTTVRAKDVEDIFSKYGRVLYVDLK-DRRQPYFAFVEFEDARDAEDAVRGRDGY 65
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+++G RLRVE G RGP G + + G G SR + YRVI
Sbjct: 66 DYEGYRLRVEFPRGLGPRGPGGRPYDSG------RNLSVSRSACGGGSSSGSRRASYRVI 119
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP+S SWQDLKDHMR+AGDVC+ +V RD GT G+V+Y EDMKYA+RKLDDT+F+
Sbjct: 120 VSGLPASGSWQDLKDHMREAGDVCYTDVLRD--GT-GIVEYGRYEDMKYALRKLDDTKFK 176
Query: 189 NPWARGRITVKRYDRSPSRSRSRSRS 214
+ + D SR+ SRSRS
Sbjct: 177 SHEGETSYIRVKEDNGESRAHSRSRS 202
>gi|55742372|ref|NP_001006919.1| serine/arginine-rich splicing factor 1 [Xenopus (Silurana)
tropicalis]
gi|92058727|sp|Q6DII2.1|SRSF1_XENTR RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|49523075|gb|AAH75558.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor) [Xenopus (Silurana)
tropicalis]
Length = 267
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/187 (60%), Positives = 133/187 (71%), Gaps = 9/187 (4%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGA-----GRFG-ISRH 122
++DG RLRVE G G G GG GGGG GG GG G G G GR+G SR
Sbjct: 78 DYDGYRLRVEFPRSGRGAGGRGGGGGGGGGGGGGGGGGGGGGGGGGGGAPRGRYGPPSRR 137
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKL 182
SEYRV+V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ EDM YA+RKL
Sbjct: 138 SEYRVVVSGLPPSGSWQDLKDHMREAGDVCYADVFRD--GT-GVVEFVRKEDMTYAVRKL 194
Query: 183 DDTEFRN 189
D+T+FR+
Sbjct: 195 DNTKFRS 201
>gi|428170004|gb|EKX38933.1| hypothetical protein GUITHDRAFT_39633, partial [Guillardia theta
CCMP2712]
Length = 171
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/192 (48%), Positives = 118/192 (61%), Gaps = 25/192 (13%)
Query: 11 VGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDA----IRGRD 66
VGNLP DIRE +++DLFYKYGRI DIE+K P RPP + FVEF+N DAEDA + D
Sbjct: 1 VGNLPLDIRERDIDDLFYKYGRIRDIEVKTPSRPPAFAFVEFDNLYDAEDAGMCALPCTD 60
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G F+G RLRVE++ G + GY G+G A R S+YR
Sbjct: 61 GVMFEGARLRVEMSRGTAATY--------GYDKRGSGKAPPRNL----------RRSDYR 102
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTE 186
VI+ GLP SASWQDLKD R+AG++ + +V R G+V++ N +D YAI+K DDTE
Sbjct: 103 VIISGLPKSASWQDLKDFFRQAGEIVYTDVDRQGG---GIVEFANEDDRDYAIKKFDDTE 159
Query: 187 FRNPWARGRITV 198
F NP+ RG I V
Sbjct: 160 FSNPFDRGYIRV 171
>gi|291190420|ref|NP_001167114.1| Splicing factor, arginine/serine-rich 1 [Salmo salar]
gi|223648208|gb|ACN10862.1| Splicing factor, arginine/serine-rich 1 [Salmo salar]
Length = 251
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/181 (56%), Positives = 122/181 (67%), Gaps = 15/181 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR +VED+FYKYG I DI+LK P + F+EFE+ RDA+DA+ GRDGY
Sbjct: 17 IYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFIEFEDPRDADDAVYGRDGY 76
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE P S G G GG G G G SR SEYRVI
Sbjct: 77 DYDGYRLRVEF--------PRSGRGGGRGGFGGGGVGGAPRGRYGPP----SRRSEYRVI 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ EDM YA+RKLD+T+FR
Sbjct: 125 VSGLPQSGSWQDLKDHMREAGDVCYADVFRD--GT-GVVEFVRKEDMTYAVRKLDNTKFR 181
Query: 189 N 189
+
Sbjct: 182 S 182
>gi|166091440|ref|NP_001107213.1| serine/arginine-rich splicing factor 1 [Gallus gallus]
Length = 248
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/181 (55%), Positives = 119/181 (65%), Gaps = 16/181 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG G SR SEYRVI
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGG-------------GGGGGGAPRGRYGPPSRRSEYRVI 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ EDM YA+RKLD+T+FR
Sbjct: 125 VSGLPPSGSWQDLKDHMREAGDVCYADVFRD--GT-GVVEFVRKEDMTYAVRKLDNTKFR 181
Query: 189 N 189
+
Sbjct: 182 S 182
>gi|312074323|ref|XP_003139919.1| arginine/serine-rich splicing factor 1 [Loa loa]
gi|307764921|gb|EFO24155.1| arginine/serine-rich splicing factor 1 [Loa loa]
gi|393908262|gb|EJD74982.1| arginine/serine-rich splicing factor 1, variant 1 [Loa loa]
gi|393908263|gb|EJD74983.1| arginine/serine-rich splicing factor 1, variant 2 [Loa loa]
gi|393908264|gb|EJD74984.1| arginine/serine-rich splicing factor 1, variant 3 [Loa loa]
gi|393908265|gb|EJD74985.1| arginine/serine-rich splicing factor 1, variant 4 [Loa loa]
gi|402591888|gb|EJW85817.1| hypothetical protein WUBG_03274 [Wuchereria bancrofti]
Length = 237
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/189 (51%), Positives = 125/189 (66%), Gaps = 12/189 (6%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M+GR +Y+GNLP DIR+ ++EDLFYKYG I I++K+ P + F+EF++ RDA D
Sbjct: 1 MAGRRDCRVYIGNLPPDIRQRDLEDLFYKYGHINFIDVKLTRGAP-FAFIEFDDPRDARD 59
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGY DGCR+RVE+ G RGP G G G
Sbjct: 60 AIRGRDGYELDGCRIRVEMTRGVGPRGPGGRPL--------YGPDRGERDRRPPPPRGPP 111
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R S YRV+V GLP + SWQDLKDHMR+AGD+C+A+V +D GT GVV+YT +DMKYAI+
Sbjct: 112 RRSGYRVLVTGLPVTGSWQDLKDHMREAGDICYADVFKD--GT-GVVEYTRQDDMKYAIK 168
Query: 181 KLDDTEFRN 189
KLDDT+F++
Sbjct: 169 KLDDTKFKS 177
>gi|341889616|gb|EGT45551.1| hypothetical protein CAEBREN_06053 [Caenorhabditis brenneri]
Length = 260
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/186 (56%), Positives = 132/186 (70%), Gaps = 7/186 (3%)
Query: 6 SRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGR 65
+ +YVGNLP D+R+ EVED+F+KYGRI I++K R P + FVEFE+ RDAEDA+R R
Sbjct: 9 DQKVYVGNLPGDVRDKEVEDIFHKYGRIKYIDIK-SGRGPAFAFVEFEDHRDAEDAVRAR 67
Query: 66 DGYNFDGCRLRVELAHGGSGRGPSSS--DRRGGYGGGGAGGAGGAGAGAGAGRFGISRHS 123
DGY FDG R+RVE G RGP + GGY GG G G G G G G R +
Sbjct: 68 DGYEFDGRRIRVEFTRGVGPRGPGGRPLNDDGGYSGGRDRGDYRGGRGGGRGG-GPQRRT 126
Query: 124 EYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLD 183
YRVIV GLP + SWQDLKDHMR+AGDVC+A+V+RD GT GVV++T +D+KYA+RKLD
Sbjct: 127 GYRVIVEGLPPTGSWQDLKDHMREAGDVCYADVARD--GT-GVVEFTRYDDVKYAVRKLD 183
Query: 184 DTEFRN 189
DT+FR+
Sbjct: 184 DTKFRS 189
>gi|334322457|ref|XP_003340247.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Monodelphis
domestica]
gi|395531888|ref|XP_003768005.1| PREDICTED: serine/arginine-rich splicing factor 1 [Sarcophilus
harrisii]
Length = 249
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/181 (55%), Positives = 120/181 (66%), Gaps = 15/181 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G G GG G SR SEYRV+
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGG------------GGGGGGGAPRGRYGPPSRRSEYRVV 125
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ EDM YA+RKLD+T+FR
Sbjct: 126 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD--GT-GVVEFVRKEDMTYAVRKLDNTKFR 182
Query: 189 N 189
+
Sbjct: 183 S 183
>gi|47087630|ref|NP_998180.1| serine/arginine-rich splicing factor 1A [Danio rerio]
gi|33416587|gb|AAH55511.1| Splicing factor, arginine/serine-rich 1, like [Danio rerio]
Length = 245
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/181 (60%), Positives = 127/181 (70%), Gaps = 5/181 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR +VED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ RDGY
Sbjct: 17 IYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYARDGY 76
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE SGRG GG GGGG GG GG G SR SEYRVI
Sbjct: 77 DYDGYRLRVEFPR--SGRGMGRGGFGGGGGGGGGGGGGGGGGAPRGRYGPPSRRSEYRVI 134
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ EDM YA+RKLD+T+FR
Sbjct: 135 VSGLPPSGSWQDLKDHMREAGDVCYADVFRD--GT-GVVEFVRKEDMTYAVRKLDNTKFR 191
Query: 189 N 189
+
Sbjct: 192 S 192
>gi|395833916|ref|XP_003789963.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 1
[Otolemur garnettii]
gi|395833918|ref|XP_003789964.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 2
[Otolemur garnettii]
Length = 221
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 117/181 (64%), Gaps = 24/181 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+D+RE ++EDLFYKYGRI +IELK + FV FE+ RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ CRLRVE G+G R G +R S++RV+
Sbjct: 76 DYGQCRLRVEFPRTYGGQGGWPRGGRNG---------------------PPTRRSDFRVL 114
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y EDM+YA+RKLDDT+FR
Sbjct: 115 VSGLPPSGSWQDLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKLDDTKFR 171
Query: 189 N 189
+
Sbjct: 172 S 172
>gi|114108043|gb|AAI23123.1| Sfrs1 protein [Xenopus laevis]
Length = 296
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 111/184 (60%), Positives = 130/184 (70%), Gaps = 6/184 (3%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 50 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 109
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGI---SRHSEY 125
++DG RLRVE G G G GG GGG GG GG G G GA R SR SEY
Sbjct: 110 DYDGYRLRVEFPRSGRGAGGRGGGGGGGGSGGGGGGGGGGGGGGGAPRGRYGPPSRRSEY 169
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
RV+V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ EDM YA+RKLD+T
Sbjct: 170 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVFRD--GT-GVVEFVRKEDMTYAVRKLDNT 226
Query: 186 EFRN 189
+FR+
Sbjct: 227 KFRS 230
>gi|269849649|sp|Q7SXP4.2|SRS1A_DANRE RecName: Full=Serine/arginine-rich splicing factor 1A; AltName:
Full=Splicing factor, arginine/serine-rich 1; AltName:
Full=Splicing factor, arginine/serine-rich 1A
gi|157423199|gb|AAI53597.1| Sfrs1l protein [Danio rerio]
gi|157423322|gb|AAI53598.1| Sfrs1l protein [Danio rerio]
Length = 257
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/181 (59%), Positives = 125/181 (69%), Gaps = 6/181 (3%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR +VED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ RDGY
Sbjct: 17 IYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYARDGY 76
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G GG GGGG GG GG G SR SEYRVI
Sbjct: 77 DYDGYRLRVEFPRSGRG---MGRGGFGGGGGGGGGGGGGGGGAPRGRYGPPSRRSEYRVI 133
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ EDM YA+RKLD+T+FR
Sbjct: 134 VSGLPPSGSWQDLKDHMREAGDVCYADVFRD--GT-GVVEFVRKEDMTYAVRKLDNTKFR 190
Query: 189 N 189
+
Sbjct: 191 S 191
>gi|118835441|gb|AAI28932.1| Sfrs1 protein [Xenopus laevis]
Length = 294
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 111/184 (60%), Positives = 130/184 (70%), Gaps = 6/184 (3%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 48 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 107
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGI---SRHSEY 125
++DG RLRVE G G G GG GGG GG GG G G GA R SR SEY
Sbjct: 108 DYDGYRLRVEFPRSGRGAGGRGGGGGGGGSGGGGGGGGGGGGGGGAPRGRYGPPSRRSEY 167
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
RV+V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ EDM YA+RKLD+T
Sbjct: 168 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVFRD--GT-GVVEFVRKEDMTYAVRKLDNT 224
Query: 186 EFRN 189
+FR+
Sbjct: 225 KFRS 228
>gi|27503247|gb|AAH42354.1| Sfrs1 protein, partial [Xenopus laevis]
Length = 283
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 111/184 (60%), Positives = 130/184 (70%), Gaps = 6/184 (3%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 37 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 96
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGI---SRHSEY 125
++DG RLRVE G G G GG GGG GG GG G G GA R SR SEY
Sbjct: 97 DYDGYRLRVEFPRSGRGAGGRGGGGGGGGSGGGGGGGGGGGGGGGAPRGRYGPPSRRSEY 156
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
RV+V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ EDM YA+RKLD+T
Sbjct: 157 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVFRD--GT-GVVEFVRKEDMTYAVRKLDNT 213
Query: 186 EFRN 189
+FR+
Sbjct: 214 KFRS 217
>gi|402899743|ref|XP_003912847.1| PREDICTED: serine/arginine-rich splicing factor 1 [Papio anubis]
Length = 375
Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 99/181 (54%), Positives = 118/181 (65%), Gaps = 16/181 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 145 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 204
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG G SR SE RV+
Sbjct: 205 DYDGYRLRVEFPRSGRGTGRGGG-------------GGGGGGAPRGRYGPPSRRSENRVV 251
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ EDM YA+RKLD+T+FR
Sbjct: 252 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD--GT-GVVEFVRKEDMTYAVRKLDNTKFR 308
Query: 189 N 189
+
Sbjct: 309 S 309
>gi|63101956|gb|AAH95586.1| Sfrs1 protein [Danio rerio]
gi|182889684|gb|AAI65510.1| Sfrs1 protein [Danio rerio]
Length = 258
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 101/181 (55%), Positives = 118/181 (65%), Gaps = 16/181 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR +VED+FYKYG I DI+LK + FVEFE+ RDAEDA+ GRDGY
Sbjct: 17 IYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGQPFAFVEFEDPRDAEDAVYGRDGY 76
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G G G G SR SEYRVI
Sbjct: 77 DYDGYRLRVEFPRSGRGGGRGGGGGGGVGAPRGRYGPP-------------SRRSEYRVI 123
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ EDM YA+RKLD+T+FR
Sbjct: 124 VSGLPPSGSWQDLKDHMREAGDVCYADVFRD--GT-GVVEFVRKEDMTYAVRKLDNTKFR 180
Query: 189 N 189
+
Sbjct: 181 S 181
>gi|260833612|ref|XP_002611806.1| hypothetical protein BRAFLDRAFT_141671 [Branchiostoma floridae]
gi|229297178|gb|EEN67815.1| hypothetical protein BRAFLDRAFT_141671 [Branchiostoma floridae]
Length = 175
Score = 163 bits (413), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 96/181 (53%), Positives = 124/181 (68%), Gaps = 16/181 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP ++R+ +++D+FYKYG+I+ ++LKI PP + FVEFE+ RDA+DA+ GRDGY
Sbjct: 8 IYVGNLPPEVRQEDIKDVFYKYGKIIHVDLKIGRGPP-FAFVEFEDKRDADDAVYGRDGY 66
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
DG RLRVE G + G S G GG G G SR SEYRV+
Sbjct: 67 TLDGYRLRVEFPRGSARGGYGRS------------GGGGGGGGGARRGGAPSRRSEYRVL 114
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP + SWQDLKDHMR+AGDVCFA+V RD GT GVV++ +DMKYA++ LDD++FR
Sbjct: 115 VSGLPPTGSWQDLKDHMREAGDVCFADVFRD--GT-GVVEFLRYDDMKYAVKHLDDSKFR 171
Query: 189 N 189
+
Sbjct: 172 S 172
>gi|348518531|ref|XP_003446785.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Oreochromis
niloticus]
Length = 264
Score = 163 bits (413), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 106/181 (58%), Positives = 125/181 (69%), Gaps = 7/181 (3%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR +VEDLFYKYG I DI+LK P + FV+F++ RDAEDA+ GRDGY
Sbjct: 17 IYVGNLPPDIRSKDVEDLFYKYGSIRDIDLKNRRGGPPFAFVQFDDPRDAEDAVYGRDGY 76
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG GGGG GG G G SR SE RV+
Sbjct: 77 DYDGYRLRVEFPRSGRGGGGGGGGGGGGGGGGGGGGMGPPRGRYGPP----SRRSENRVV 132
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ EDM YA+RKLD+T+FR
Sbjct: 133 VSGLPPSGSWQDLKDHMREAGDVCYADVFRD--GT-GVVEFVRKEDMTYAVRKLDNTKFR 189
Query: 189 N 189
+
Sbjct: 190 S 190
>gi|213515460|ref|NP_001133886.1| Splicing factor, arginine/serine-rich 9 [Salmo salar]
gi|209155694|gb|ACI34079.1| Splicing factor, arginine/serine-rich 9 [Salmo salar]
gi|223649152|gb|ACN11334.1| Splicing factor, arginine/serine-rich 9 [Salmo salar]
Length = 252
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 101/187 (54%), Positives = 122/187 (65%), Gaps = 25/187 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELK-----IPPRPPCYCFVEFENARDAEDAIR 63
IYVGNLP D++E ++EDLF+KYG+I DIELK IP + FV FE+ RDAEDA+
Sbjct: 6 IYVGNLPMDVQERDIEDLFFKYGKIRDIELKNNRGTIP-----FAFVRFEDPRDAEDAVY 60
Query: 64 GRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGI-SRH 122
GR+GY +LRVE P SS G G GG G GRFG +R
Sbjct: 61 GRNGYGLGDSKLRVEY--------PRSS---GAKFSGPMGGGERGEGGGPKGRFGPPTRR 109
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKL 182
SE+RVIV GLP S SWQDLKDHMR+AGDVCFA+V RD E GVV++ EDM+YA+R+L
Sbjct: 110 SEFRVIVTGLPPSGSWQDLKDHMREAGDVCFADVQRDGE---GVVEFVRREDMEYALRRL 166
Query: 183 DDTEFRN 189
D TEFR+
Sbjct: 167 DRTEFRS 173
>gi|306966179|ref|NP_001182476.1| splicing factor, arginine/serine-rich 1B [Pan troglodytes]
gi|291405734|ref|XP_002719321.1| PREDICTED: splicing factor, arginine/serine-rich 1 [Oryctolagus
cuniculus]
gi|297272653|ref|XP_001103473.2| PREDICTED: splicing factor, arginine/serine-rich 1-like isoform 1
[Macaca mulatta]
gi|348562139|ref|XP_003466868.1| PREDICTED: serine/arginine-rich splicing factor 1-like isoform 2
[Cavia porcellus]
gi|119614898|gb|EAW94492.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_g [Homo sapiens]
Length = 253
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/181 (54%), Positives = 118/181 (65%), Gaps = 16/181 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG G SR SE RV+
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGG-------------GGGGGGAPRGRYGPPSRRSENRVV 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ EDM YA+RKLD+T+FR
Sbjct: 125 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD--GT-GVVEFVRKEDMTYAVRKLDNTKFR 181
Query: 189 N 189
+
Sbjct: 182 S 182
>gi|308466765|ref|XP_003095634.1| hypothetical protein CRE_13671 [Caenorhabditis remanei]
gi|308244633|gb|EFO88585.1| hypothetical protein CRE_13671 [Caenorhabditis remanei]
Length = 328
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 117/290 (40%), Positives = 160/290 (55%), Gaps = 55/290 (18%)
Query: 8 TIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPR-PPCYCFVEFENARDAEDAIRGRD 66
T+YVGNLPS++RE E+ED+F+KYG I +I++K R P + F++F++ RDA++A+R RD
Sbjct: 5 TVYVGNLPSNVREKEIEDIFHKYGEIRNIDIKSRSRDSPAFAFIQFDDRRDAKEAVRARD 64
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
GY FDG RLRVE G R G G G G + S YR
Sbjct: 65 GYEFDGKRLRVEFPRGQGP---RGPGGRPTRDNGSRFGRNG----------GPPKRSNYR 111
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTE 186
+IV GLP S SWQD+KDH+++AG++C+A V GVV++ ED++YAIRK DDT+
Sbjct: 112 LIVEGLPRSGSWQDIKDHLKQAGEICYANV----HNGEGVVEFERYEDLEYAIRKYDDTK 167
Query: 187 FRN---PWARGRITV---------KRYDRSPSRSRSR----------------------S 212
FR+ A R+ KR RS SRS+S S
Sbjct: 168 FRSHKGETAYIRLKEDKSEYAKENKRRTRSISRSKSPIRGRCSRSSSRSKSSIRGRRNGS 227
Query: 213 RSRSRSRSRIVRRNRSKSLERSVSRSVSRSMSASPVKSSRARSRSRSVSP 262
S+SRSRS + R++R +S S +R VSRS SP+ R R+RS S +P
Sbjct: 228 ASKSRSRSPVSRQHRDRSESGSPARRVSRSR--SPISRQR-RARSESGTP 274
>gi|417409273|gb|JAA51151.1| Putative splicing factor arginine/serine-rich 1-like protein,
partial [Desmodus rotundus]
Length = 278
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/181 (54%), Positives = 118/181 (65%), Gaps = 16/181 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 48 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 107
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG G SR SE RV+
Sbjct: 108 DYDGYRLRVEFPRSGRGTGRGGG-------------GGGGGGAPRGRYGPPSRRSENRVV 154
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ EDM YA+RKLD+T+FR
Sbjct: 155 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD--GT-GVVEFVRKEDMTYAVRKLDNTKFR 211
Query: 189 N 189
+
Sbjct: 212 S 212
>gi|390336105|ref|XP_003724280.1| PREDICTED: serine/arginine-rich splicing factor 1-like
[Strongylocentrotus purpuratus]
Length = 299
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/195 (48%), Positives = 118/195 (60%), Gaps = 42/195 (21%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCY--------------CFVEFEN 54
IYVGNLP DIRE ++ED+FYK+G + DI+LK RPP + FVEF +
Sbjct: 18 IYVGNLPPDIREKDIEDMFYKFGSVADIDLK-NKRPPSFSSSGSERERFGTPFAFVEFYD 76
Query: 55 ARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGA 114
RDA+DA+ RDGYN+DG R+RVE G G S
Sbjct: 77 RRDADDAVLARDGYNYDGYRIRVEFPRGTKGFKGSRPRGPP------------------- 117
Query: 115 GRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPED 174
R S YRVIV GLPS+ SWQDLKDHMR+AGDVC+A+V RD GT GVV++ PED
Sbjct: 118 -----PRRSSYRVIVSGLPSTGSWQDLKDHMREAGDVCYADVYRD--GT-GVVEFLRPED 169
Query: 175 MKYAIRKLDDTEFRN 189
MKYA+++LDDT+FR+
Sbjct: 170 MKYAVKQLDDTKFRS 184
>gi|240848767|ref|NP_001155687.1| serine/arginine-rich splicing factor 1-like [Acyrthosiphon pisum]
gi|239789607|dbj|BAH71418.1| ACYPI006929 [Acyrthosiphon pisum]
Length = 244
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/193 (52%), Positives = 133/193 (68%), Gaps = 10/193 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR +++DLFYK+G++L ++LK PP + FVEF++ RDAEDA+ RDGY
Sbjct: 8 IYVGNLPPDIRTKDIQDLFYKFGKVLFVDLKNQRGPP-FAFVEFDDPRDAEDAVHARDGY 66
Query: 69 NFDGCRLRVELAHGGSGRGPS-SSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRV 127
++DG RLRVE G GP S G GGG+ GGA G+G R +R S+YRV
Sbjct: 67 DYDGYRLRVEFPRGN---GPHRSGGGGGSSSGGGSYNRGGASGGSGRSRGPPARRSQYRV 123
Query: 128 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
+V GLP+S SWQDLKDHMR+AGDVC+A+V +D GVV++ +DMKYA+RKLDD+ F
Sbjct: 124 LVTGLPASGSWQDLKDHMREAGDVCYADVYKDGS---GVVEFLRYDDMKYAVRKLDDSRF 180
Query: 188 RNPWARGRITVKR 200
R+ G +T R
Sbjct: 181 RS--HEGEVTYIR 191
>gi|327282648|ref|XP_003226054.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Anolis
carolinensis]
Length = 245
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/181 (51%), Positives = 118/181 (65%), Gaps = 22/181 (12%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+++RE ++E+LFYKYGRI DIELK + FV FE+ RDAEDA+ GR+GY
Sbjct: 38 IYVGNLPANVREKDLEELFYKYGRIRDIELKSKRGLVPFAFVRFEDPRDAEDAVYGRNGY 97
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ CRLRVE + G GG G G SR SE+RV+
Sbjct: 98 DYGQCRLRVEFPK-------------------PSRGRGGFGGGPRGRNGPPSRRSEFRVL 138
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V +D GVV++ EDM+YA+RKLDDT+FR
Sbjct: 139 VSGLPPSGSWQDLKDHMREAGDVCYADVQKDG---MGVVEFLRKEDMEYALRKLDDTKFR 195
Query: 189 N 189
+
Sbjct: 196 S 196
>gi|426236979|ref|XP_004023550.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 1 [Ovis aries]
Length = 190
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/180 (53%), Positives = 114/180 (63%), Gaps = 27/180 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRXGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G SR SE RV+
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRRGRYGPP------------------------SRRSENRVV 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ EDM YA+RKLD+T+FR
Sbjct: 114 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD--GT-GVVEFVRKEDMTYAVRKLDNTKFR 170
>gi|60811245|gb|AAX36166.1| splicing factor arginine/serine-rich 1 [synthetic construct]
Length = 249
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/180 (55%), Positives = 117/180 (65%), Gaps = 16/180 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG G SR SE RV+
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGG-------------GGGGGGAPRGRYGPPSRRSENRVV 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ EDM YA+RKLD+T+FR
Sbjct: 125 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD--GT-GVVEFVRKEDMTYAVRKLDNTKFR 181
>gi|197099026|ref|NP_001126337.1| serine/arginine-rich splicing factor 1 [Pongo abelii]
gi|68724975|sp|Q5R7H2.3|SRSF1_PONAB RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|55731147|emb|CAH92288.1| hypothetical protein [Pongo abelii]
Length = 248
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/180 (55%), Positives = 117/180 (65%), Gaps = 16/180 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG G SR SE RV+
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGG-------------GGGGGGAPRGRYGPPSRRSENRVV 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ EDM YA+RKLD+T+FR
Sbjct: 125 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD--GT-GVVEFVRKEDMTYAVRKLDNTKFR 181
>gi|358336433|dbj|GAA54942.1| splicing factor arginine/serine-rich 1/9 [Clonorchis sinensis]
Length = 251
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/186 (52%), Positives = 122/186 (65%), Gaps = 14/186 (7%)
Query: 3 GRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAI 62
R + IYVGNLP D++ +VE+LF KYG I +I+LK R P + F+EFE+ DA DA+
Sbjct: 2 ARSTTKIYVGNLPPDVKTRDVENLFSKYGPIAEIDLK-SRRGPPFAFIEFEDELDAADAV 60
Query: 63 RGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRH 122
RGRDGYNFDG LRVE GG+ Y G G G G G G SR
Sbjct: 61 RGRDGYNFDGYALRVEFPRGGTA----------SYNGSGGNFNSFRRGGFGRGGGGPSRR 110
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKL 182
S++RV+V GLP + SWQDLKDHMR+AGDV +A+V RD GT GVV++ EDMKYA+RKL
Sbjct: 111 SDFRVVVTGLPPTGSWQDLKDHMREAGDVGYADVFRD--GT-GVVEFLRYEDMKYAVRKL 167
Query: 183 DDTEFR 188
DD++FR
Sbjct: 168 DDSKFR 173
>gi|5902076|ref|NP_008855.1| serine/arginine-rich splicing factor 1 isoform 1 [Homo sapiens]
gi|34328400|ref|NP_775550.2| serine/arginine-rich splicing factor 1 isoform 1 [Mus musculus]
gi|83921643|ref|NP_001033096.1| serine/arginine-rich splicing factor 1 [Sus scrofa]
gi|115497078|ref|NP_001069862.1| serine/arginine-rich splicing factor 1 [Bos taurus]
gi|157818019|ref|NP_001103022.1| splicing factor, arginine/serine-rich 1B [Rattus norvegicus]
gi|306966181|ref|NP_001182477.1| splicing factor, arginine/serine-rich 1 [Equus caballus]
gi|306966183|ref|NP_001182478.1| splicing factor, arginine/serine-rich 1 [Macaca mulatta]
gi|73966540|ref|XP_866729.1| PREDICTED: serine/arginine-rich splicing factor 1 isoform 2 [Canis
lupus familiaris]
gi|296202380|ref|XP_002748436.1| PREDICTED: serine/arginine-rich splicing factor 1-like isoform 1
[Callithrix jacchus]
gi|332246407|ref|XP_003272345.1| PREDICTED: serine/arginine-rich splicing factor 1 [Nomascus
leucogenys]
gi|344285799|ref|XP_003414647.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Loxodonta
africana]
gi|397493084|ref|XP_003817443.1| PREDICTED: serine/arginine-rich splicing factor 1 [Pan paniscus]
gi|403279712|ref|XP_003931390.1| PREDICTED: serine/arginine-rich splicing factor 1 [Saimiri
boliviensis boliviensis]
gi|410980663|ref|XP_003996696.1| PREDICTED: serine/arginine-rich splicing factor 1 [Felis catus]
gi|426347344|ref|XP_004041313.1| PREDICTED: serine/arginine-rich splicing factor 1 [Gorilla gorilla
gorilla]
gi|730773|sp|Q07955.2|SRSF1_HUMAN RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Alternative-splicing factor 1; Short=ASF-1;
AltName: Full=Splicing factor, arginine/serine-rich 1;
AltName: Full=pre-mRNA-splicing factor SF2, P33 subunit
gi|68725069|sp|Q6PDM2.3|SRSF1_MOUSE RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=ASF/SF2; AltName: Full=Pre-mRNA-splicing factor
SRp30a; AltName: Full=Splicing factor,
arginine/serine-rich 1
gi|114152157|sp|Q3YLA6.3|SRSF1_PIG RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|122145605|sp|Q0VCY7.1|SRSF1_BOVIN RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|179075|gb|AAA35565.1| alternative [Homo sapiens]
gi|338047|gb|AAA03476.1| SF2p33 [Homo sapiens]
gi|16307434|gb|AAH10264.1| Splicing factor, arginine/serine-rich 1 [Homo sapiens]
gi|21104372|dbj|BAB93456.1| OK/SW-cl.3 [Homo sapiens]
gi|28386236|gb|AAH46773.1| Sfrs1 protein [Mus musculus]
gi|35192949|gb|AAH58627.1| Splicing factor, arginine/serine-rich 1 (ASF/SF2) [Mus musculus]
gi|61364743|gb|AAX42596.1| splicing factor arginine/serine-rich 1 [synthetic construct]
gi|73810229|gb|AAZ86088.1| splicing factor arginine/serine-rich 1 [Sus scrofa]
gi|73810231|gb|AAZ86089.1| splicing factor arginine/serine-rich 1 [Sus scrofa]
gi|74151692|dbj|BAE29641.1| unnamed protein product [Mus musculus]
gi|111306978|gb|AAI19931.1| Splicing factor, arginine/serine-rich 1 [Bos taurus]
gi|119614891|gb|EAW94485.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_a [Homo sapiens]
gi|119614892|gb|EAW94486.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_a [Homo sapiens]
gi|149053807|gb|EDM05624.1| rCG34610, isoform CRA_c [Rattus norvegicus]
gi|189053478|dbj|BAG35644.1| unnamed protein product [Homo sapiens]
gi|296477057|tpg|DAA19172.1| TPA: splicing factor, arginine/serine-rich 1 [Bos taurus]
gi|336088097|dbj|BAK39908.1| splicing factor, arginine/serine-rich 1, transcript variant 1
[Cricetulus griseus]
gi|344243483|gb|EGV99586.1| Splicing factor, arginine/serine-rich 1 [Cricetulus griseus]
gi|380784743|gb|AFE64247.1| serine/arginine-rich splicing factor 1 isoform 1 [Macaca mulatta]
gi|383420721|gb|AFH33574.1| serine/arginine-rich splicing factor 1 isoform 1 [Macaca mulatta]
gi|384941916|gb|AFI34563.1| serine/arginine-rich splicing factor 1 isoform 1 [Macaca mulatta]
gi|410224700|gb|JAA09569.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410263644|gb|JAA19788.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410308964|gb|JAA33082.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410351427|gb|JAA42317.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410351431|gb|JAA42319.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|431890828|gb|ELK01707.1| Splicing factor, arginine/serine-rich 1 [Pteropus alecto]
Length = 248
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/180 (55%), Positives = 117/180 (65%), Gaps = 16/180 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG G SR SE RV+
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGG-------------GGGGGGAPRGRYGPPSRRSENRVV 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ EDM YA+RKLD+T+FR
Sbjct: 125 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD--GT-GVVEFVRKEDMTYAVRKLDNTKFR 181
>gi|308459689|ref|XP_003092160.1| hypothetical protein CRE_20046 [Caenorhabditis remanei]
gi|308254090|gb|EFO98042.1| hypothetical protein CRE_20046 [Caenorhabditis remanei]
Length = 333
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/215 (42%), Positives = 128/215 (59%), Gaps = 18/215 (8%)
Query: 8 TIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPR-PPCYCFVEFENARDAEDAIRGRD 66
T+YVGNLPSD+RE E+ED+F+KYG I +I++K R P + F++F++ RDA++A+R RD
Sbjct: 5 TVYVGNLPSDVREKEIEDIFHKYGEIRNIDIKSRSRDSPAFAFIQFDDRRDAKEAVRARD 64
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
GY FDG RLRVE G R G G G G + S YR
Sbjct: 65 GYEFDGKRLRVEFPRGQGP---RGPGGRPTRDNGSRFGRNG----------GPPKRSNYR 111
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTE 186
+IV GLP S SWQD+KDH+++AG++C+A V GVV++ ED++YA RK DDT+
Sbjct: 112 LIVEGLPRSGSWQDIKDHLKQAGEICYANV----HNGEGVVEFERYEDLEYAFRKYDDTK 167
Query: 187 FRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRSR 221
FR+ + D+S ++ R+RS SRS+
Sbjct: 168 FRSHKGETAYIRLKEDKSEYAKENKRRTRSISRSK 202
>gi|268561908|ref|XP_002646556.1| Hypothetical protein CBG20414 [Caenorhabditis briggsae]
Length = 308
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/187 (48%), Positives = 121/187 (64%), Gaps = 6/187 (3%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS S TI++GNLP D+RE E++ LF KYGRI +++K + FV+F ++RDA+D
Sbjct: 1 MSRDASDTIFIGNLPGDVREKELDSLFSKYGRINKVDVKSGRGGAAFGFVQFSDSRDADD 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
A+RGRDGY+FDG R+RVEL G RGP R GY G G G G
Sbjct: 61 AVRGRDGYDFDGKRIRVELTRGSGPRGPGGRPVRDGYDRGYDRRDDGYGRRQS---HGPP 117
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R SE R I+ GLP + SWQD+KDH++ AGD+C+A+V R+ + G+V++ EDMKYAI+
Sbjct: 118 RRSENRAIIEGLPPTGSWQDIKDHLKSAGDICYADVGRNGD---GIVEFEKHEDMKYAIK 174
Query: 181 KLDDTEF 187
K DDT+F
Sbjct: 175 KFDDTKF 181
>gi|444723179|gb|ELW63840.1| Serine/arginine-rich splicing factor 9 [Tupaia chinensis]
Length = 235
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 116/181 (64%), Gaps = 24/181 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+D+RE ++EDLFYKYGRI +IELK + FV FE+ RDAEDAI GR+GY
Sbjct: 30 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNQHGLVPFAFVRFEDPRDAEDAIYGRNGY 89
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ CRLRVE GR G G +R S++RV+
Sbjct: 90 DYGQCRLRVEFPRTYGGR---------------------GGWPRGGRNGPPTRRSDFRVL 128
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y EDM+YA+RKLDDT+FR
Sbjct: 129 VSGLPPSGSWQDLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKLDDTKFR 185
Query: 189 N 189
+
Sbjct: 186 S 186
>gi|118582269|ref|NP_001071634.1| serine/arginine-rich splicing factor 1 isoform 2 [Homo sapiens]
gi|45708738|gb|AAH33785.1| SFRS1 protein [Homo sapiens]
gi|119614895|gb|EAW94489.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_d [Homo sapiens]
gi|168277706|dbj|BAG10831.1| splicing factor, arginine/serine-rich 1 [synthetic construct]
gi|410263646|gb|JAA19789.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410308966|gb|JAA33083.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410351429|gb|JAA42318.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
Length = 201
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/180 (55%), Positives = 117/180 (65%), Gaps = 16/180 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG G SR SE RV+
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGG-------------GGGGGGAPRGRYGPPSRRSENRVV 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ EDM YA+RKLD+T+FR
Sbjct: 125 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD--GT-GVVEFVRKEDMTYAVRKLDNTKFR 181
>gi|384950066|gb|AFI38638.1| serine/arginine-rich splicing factor 9 [Macaca mulatta]
Length = 221
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 117/181 (64%), Gaps = 24/181 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+D+RE ++EDLFYKYGRI +IELK + FV FE+ RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKTRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ CRLRVE P + G G G +R S++RV+
Sbjct: 76 DYGQCRLRVEF--------PRTY-------------GGRGGWPRGGRNGPPTRRSDFRVL 114
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y EDM+YA+RKLDDT+FR
Sbjct: 115 VSGLPPSGSWQDLKDHMREAGDVCYADVQKDG---VGMVEYLRKEDMEYALRKLDDTKFR 171
Query: 189 N 189
+
Sbjct: 172 S 172
>gi|62088696|dbj|BAD92795.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor) variant [Homo sapiens]
Length = 233
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/181 (54%), Positives = 118/181 (65%), Gaps = 16/181 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 50 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 109
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG G SR SE RV+
Sbjct: 110 DYDGYRLRVEFPRSGRGTGRGGG-------------GGGGGGAPRGRYGPPSRRSENRVV 156
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ EDM YA+RKLD+T+FR
Sbjct: 157 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD--GT-GVVEFVRKEDMTYAVRKLDNTKFR 213
Query: 189 N 189
+
Sbjct: 214 S 214
>gi|21358097|ref|NP_652611.1| SF2, isoform A [Drosophila melanogaster]
gi|386765902|ref|NP_001247139.1| SF2, isoform B [Drosophila melanogaster]
gi|194901262|ref|XP_001980171.1| GG20059 [Drosophila erecta]
gi|195349404|ref|XP_002041235.1| GM15444 [Drosophila sechellia]
gi|7243684|gb|AAF43413.1|AF232773_1 SR family splicing factor SF2 [Drosophila melanogaster]
gi|7331146|gb|AAF60294.1|AF234157_1 SR family splicing factor [Drosophila melanogaster]
gi|7300132|gb|AAF55300.1| SF2, isoform A [Drosophila melanogaster]
gi|15292149|gb|AAK93343.1| LD40489p [Drosophila melanogaster]
gi|190651874|gb|EDV49129.1| GG20059 [Drosophila erecta]
gi|194122840|gb|EDW44883.1| GM15444 [Drosophila sechellia]
gi|220946268|gb|ACL85677.1| SF2-PA [synthetic construct]
gi|220955952|gb|ACL90519.1| SF2-PA [synthetic construct]
gi|383292748|gb|AFH06457.1| SF2, isoform B [Drosophila melanogaster]
Length = 255
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/188 (48%), Positives = 121/188 (64%), Gaps = 13/188 (6%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M R IYVGNLP DIR +++DLF+K+G++ ++LK PP + FVEFE+ARDA+D
Sbjct: 1 MGSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADD 59
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
A++ RDGY++DG RLRVE GG +R GG G +
Sbjct: 60 AVKARDGYDYDGYRLRVEFPRGGGPGSYRGGNRNDRSRDGGGRMGGRGPP---------A 110
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
+ S+YRV+V GLP+S SWQDLKDHMR+AGDVCFA+ +D GVV++ EDMKYAI+
Sbjct: 111 KRSQYRVMVTGLPASGSWQDLKDHMREAGDVCFADTYKDGS---GVVEFLRHEDMKYAIK 167
Query: 181 KLDDTEFR 188
KLDD+ FR
Sbjct: 168 KLDDSRFR 175
>gi|195501014|ref|XP_002097620.1| GE26323 [Drosophila yakuba]
gi|194183721|gb|EDW97332.1| GE26323 [Drosophila yakuba]
Length = 254
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/188 (48%), Positives = 121/188 (64%), Gaps = 13/188 (6%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M R IYVGNLP DIR +++DLF+K+G++ ++LK PP + FVEFE+ARDA+D
Sbjct: 1 MGSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADD 59
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
A++ RDGY++DG RLRVE GG +R GG G +
Sbjct: 60 AVKARDGYDYDGYRLRVEFPRGGGPGSYRGGNRNDRSRDGGGRMGGRGPP---------A 110
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
+ S+YRV+V GLP+S SWQDLKDHMR+AGDVCFA+ +D GVV++ EDMKYAI+
Sbjct: 111 KRSQYRVMVTGLPASGSWQDLKDHMREAGDVCFADTYKDGS---GVVEFLRHEDMKYAIK 167
Query: 181 KLDDTEFR 188
KLDD+ FR
Sbjct: 168 KLDDSRFR 175
>gi|179074|gb|AAA35564.1| alternative [Homo sapiens]
gi|119614894|gb|EAW94488.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_c [Homo sapiens]
Length = 292
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/180 (55%), Positives = 117/180 (65%), Gaps = 16/180 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG G SR SE RV+
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGG-------------GGGGGGAPRGRYGPPSRRSENRVV 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ EDM YA+RKLD+T+FR
Sbjct: 125 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD--GT-GVVEFVRKEDMTYAVRKLDNTKFR 181
>gi|156394189|ref|XP_001636709.1| predicted protein [Nematostella vectensis]
gi|156223814|gb|EDO44646.1| predicted protein [Nematostella vectensis]
Length = 223
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 89/185 (48%), Positives = 114/185 (61%), Gaps = 44/185 (23%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKI-----PPRPPCYCFVEFENARDAEDAIR 63
+YVGNLP D+RE ++ D+FYKYG I D++LK PP + FVEFE+ RDAEDA++
Sbjct: 11 VYVGNLPQDVREKDLHDIFYKYGHIADVDLKNRRGAGPP----FAFVEFEDPRDAEDAVK 66
Query: 64 GRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHS 123
GRDG+ FDG R+RVE GGSG P R S
Sbjct: 67 GRDGHEFDGYRIRVEFPRGGSGPPP--------------------------------RRS 94
Query: 124 EYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLD 183
++RV V GLP + SWQDLKDHMR+AGDV F +V +D GT GVV++ +DMK+AIR LD
Sbjct: 95 DFRVQVSGLPPTGSWQDLKDHMREAGDVLFTDVFKD--GT-GVVEFARYDDMKFAIRNLD 151
Query: 184 DTEFR 188
D++FR
Sbjct: 152 DSKFR 156
>gi|351713363|gb|EHB16282.1| Splicing factor, arginine/serine-rich 1 [Heterocephalus glaber]
Length = 292
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/180 (55%), Positives = 117/180 (65%), Gaps = 16/180 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG G SR SE RV+
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGG-------------GGGGGGAPRGRYGPPSRRSENRVV 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ EDM YA+RKLD+T+FR
Sbjct: 125 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD--GT-GVVEFVRKEDMTYAVRKLDNTKFR 181
>gi|336088099|dbj|BAK39909.1| splicing factor, arginine/serine-rich 1, transcript variant 2
[Cricetulus griseus]
Length = 201
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/180 (55%), Positives = 117/180 (65%), Gaps = 16/180 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG G SR SE RV+
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGG-------------GGGGGGAPRGRYGPPSRRSENRVV 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ EDM YA+RKLD+T+FR
Sbjct: 125 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD--GT-GVVEFVRKEDMTYAVRKLDNTKFR 181
>gi|118582271|ref|NP_001071635.1| serine/arginine-rich splicing factor 1 isoform 2 [Mus musculus]
gi|26347437|dbj|BAC37367.1| unnamed protein product [Mus musculus]
Length = 201
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/180 (55%), Positives = 117/180 (65%), Gaps = 16/180 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG G SR SE RV+
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGG-------------GGGGGGAPRGRYGPPSRRSENRVV 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ EDM YA+RKLD+T+FR
Sbjct: 125 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD--GT-GVVEFVRKEDMTYAVRKLDNTKFR 181
>gi|148669917|gb|EDL01864.1| splicing factor, arginine/serine-rich 1 (ASF/SF2), isoform CRA_b
[Mus musculus]
Length = 193
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/180 (55%), Positives = 117/180 (65%), Gaps = 16/180 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG G SR SE RV+
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGG-------------GGGGGGAPRGRYGPPSRRSENRVV 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ EDM YA+RKLD+T+FR
Sbjct: 125 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD--GT-GVVEFVRKEDMTYAVRKLDNTKFR 181
>gi|395845812|ref|XP_003795615.1| PREDICTED: serine/arginine-rich splicing factor 1 [Otolemur
garnettii]
Length = 312
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/181 (54%), Positives = 118/181 (65%), Gaps = 16/181 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 82 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 141
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG G SR SE RV+
Sbjct: 142 DYDGYRLRVEFPRSGRGTGRGGG-------------GGGGGGAPRGRYGPPSRRSENRVV 188
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ EDM YA+RKLD+T+FR
Sbjct: 189 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD--GT-GVVEFVRKEDMTYAVRKLDNTKFR 245
Query: 189 N 189
+
Sbjct: 246 S 246
>gi|348562137|ref|XP_003466867.1| PREDICTED: serine/arginine-rich splicing factor 1-like isoform 1
[Cavia porcellus]
gi|380788319|gb|AFE66035.1| serine/arginine-rich splicing factor 1 isoform 2 [Macaca mulatta]
gi|383420723|gb|AFH33575.1| serine/arginine-rich splicing factor 1 isoform 2 [Macaca mulatta]
gi|384941914|gb|AFI34562.1| serine/arginine-rich splicing factor 1 isoform 2 [Macaca mulatta]
Length = 201
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/180 (55%), Positives = 117/180 (65%), Gaps = 16/180 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG G SR SE RV+
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGG-------------GGGGGGAPRGRYGPPSRRSENRVV 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ EDM YA+RKLD+T+FR
Sbjct: 125 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD--GT-GVVEFVRKEDMTYAVRKLDNTKFR 181
>gi|417397107|gb|JAA45587.1| Putative serine/arginine-rich splicing factor 1 isoform 2 [Desmodus
rotundus]
Length = 207
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 99/180 (55%), Positives = 117/180 (65%), Gaps = 16/180 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG G SR SE RV+
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGG-------------GGGGGGAPRGRYGPPSRRSENRVV 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ EDM YA+RKLD+T+FR
Sbjct: 125 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD--GT-GVVEFVRKEDMTYAVRKLDNTKFR 181
>gi|354472029|ref|XP_003498243.1| PREDICTED: serine/arginine-rich splicing factor 1 [Cricetulus
griseus]
Length = 201
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 99/180 (55%), Positives = 117/180 (65%), Gaps = 16/180 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG G SR SE RV+
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGG-------------GGGGGGAPRGRYGPPSRRSENRVV 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ EDM YA+RKLD+T+FR
Sbjct: 125 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD--GT-GVVEFVRKEDMTYAVRKLDNTKFR 181
>gi|195451089|ref|XP_002072763.1| GK13511 [Drosophila willistoni]
gi|194168848|gb|EDW83749.1| GK13511 [Drosophila willistoni]
Length = 263
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 97/188 (51%), Positives = 124/188 (65%), Gaps = 10/188 (5%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M R IYVGNLP DIR +++DLF+K+G++ ++LK PP + FVEFE+ARDA+D
Sbjct: 1 MGSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADD 59
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
A++ RDGY++DG RLRVE GG +R GG GG G G A R
Sbjct: 60 AVKARDGYDYDGYRLRVEFPRGGGPGSYRGGNRNDRNRDGGGGGGRMGGRGPPAKR---- 115
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
S+YRV+V GLP+S SWQDLKDHMR+AGDVCFA+ +D GVV++ EDMKYAI+
Sbjct: 116 --SQYRVMVTGLPTSGSWQDLKDHMREAGDVCFADTYKDGS---GVVEFLRHEDMKYAIK 170
Query: 181 KLDDTEFR 188
KLDD+ FR
Sbjct: 171 KLDDSRFR 178
>gi|348585449|ref|XP_003478484.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Cavia
porcellus]
gi|351702214|gb|EHB05133.1| Splicing factor, arginine/serine-rich 9 [Heterocephalus glaber]
Length = 221
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 117/181 (64%), Gaps = 24/181 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+D+RE ++EDLFYKYGRI +IELK + FV FE+ RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ CRLRVE P + G G G +R S++RV+
Sbjct: 76 DYGQCRLRVEF--------PRTY-------------GGRGGWPRGGRTGPPTRRSDFRVL 114
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y EDM+YA+RKLDDT+FR
Sbjct: 115 VSGLPPSGSWQDLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKLDDTKFR 171
Query: 189 N 189
+
Sbjct: 172 S 172
>gi|417397369|gb|JAA45718.1| Putative splicing factor arginine/serine-rich 9-like protein
[Desmodus rotundus]
gi|431914272|gb|ELK15530.1| Splicing factor, arginine/serine-rich 9 [Pteropus alecto]
Length = 221
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 117/181 (64%), Gaps = 24/181 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+D+RE ++EDLFYKYGRI +IELK + FV FE+ RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ CRLRVE P + G G G +R S++RV+
Sbjct: 76 DYGQCRLRVEF--------PRTY-------------GGRGGWPRGGRNGPPTRRSDFRVL 114
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y EDM+YA+RKLDDT+FR
Sbjct: 115 VSGLPPSGSWQDLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKLDDTKFR 171
Query: 189 N 189
+
Sbjct: 172 S 172
>gi|307078155|ref|NP_001182495.1| splicing factor, arginine/serine-rich 9 [Sus scrofa]
Length = 221
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 117/181 (64%), Gaps = 24/181 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+D+RE ++EDLFYKYGRI +IELK + FV FE+ RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ CRLRVE P + G G G +R S++RV+
Sbjct: 76 DYGQCRLRVEF--------PRTY-------------GGRGGWPRGGRNGPPTRRSDFRVL 114
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y EDM+YA+RKLDDT+FR
Sbjct: 115 VSGLPPSGSWQDLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKLDDTKFR 171
Query: 189 N 189
+
Sbjct: 172 S 172
>gi|426247384|ref|XP_004017466.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 2 [Ovis
aries]
Length = 200
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 117/181 (64%), Gaps = 24/181 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLPSD+RE ++EDLFYKYGRI +IELK + FV FE+ RDAEDAI GR+GY
Sbjct: 16 IYVGNLPSDVREKDLEDLFYKYGRISEIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ CRLRVE P + G G G +R S++RV+
Sbjct: 76 DYGQCRLRVEF--------PRTY-------------GGRGGWPRGGRSGPPTRRSDFRVL 114
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y EDM+YA+RKLD+T+FR
Sbjct: 115 VSGLPPSGSWQDLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKLDETKFR 171
Query: 189 N 189
+
Sbjct: 172 S 172
>gi|4506903|ref|NP_003760.1| serine/arginine-rich splicing factor 9 [Homo sapiens]
gi|114647286|ref|XP_001160785.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 2 [Pan
troglodytes]
gi|297693182|ref|XP_002823915.1| PREDICTED: serine/arginine-rich splicing factor 9 [Pongo abelii]
gi|332262536|ref|XP_003280317.1| PREDICTED: serine/arginine-rich splicing factor 9 [Nomascus
leucogenys]
gi|402887863|ref|XP_003907300.1| PREDICTED: serine/arginine-rich splicing factor 9 [Papio anubis]
gi|410047369|ref|XP_003952371.1| PREDICTED: serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|3929377|sp|Q13242.1|SRSF9_HUMAN RecName: Full=Serine/arginine-rich splicing factor 9; AltName:
Full=Pre-mRNA-splicing factor SRp30C; AltName:
Full=Splicing factor, arginine/serine-rich 9
gi|1049078|gb|AAA93069.1| SRp30c [Homo sapiens]
gi|4099429|gb|AAD00626.1| splicing factor SRp30c [Homo sapiens]
gi|62739648|gb|AAH93973.1| Splicing factor, arginine/serine-rich 9 [Homo sapiens]
gi|62740064|gb|AAH93971.1| Splicing factor, arginine/serine-rich 9 [Homo sapiens]
gi|119618600|gb|EAW98194.1| splicing factor, arginine/serine-rich 9 [Homo sapiens]
gi|261861074|dbj|BAI47059.1| splicing factor, arginine/serine-rich 9 [synthetic construct]
gi|380817540|gb|AFE80644.1| serine/arginine-rich splicing factor 9 [Macaca mulatta]
gi|383422449|gb|AFH34438.1| serine/arginine-rich splicing factor 9 [Macaca mulatta]
gi|410227624|gb|JAA11031.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410227626|gb|JAA11032.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410227628|gb|JAA11033.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410263740|gb|JAA19836.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410263742|gb|JAA19837.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410263744|gb|JAA19838.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410305344|gb|JAA31272.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410305346|gb|JAA31273.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410305348|gb|JAA31274.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410340983|gb|JAA39438.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410340985|gb|JAA39439.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
Length = 221
Score = 160 bits (404), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 117/181 (64%), Gaps = 24/181 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+D+RE ++EDLFYKYGRI +IELK + FV FE+ RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ CRLRVE P + G G G +R S++RV+
Sbjct: 76 DYGQCRLRVEF--------PRTY-------------GGRGGWPRGGRNGPPTRRSDFRVL 114
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y EDM+YA+RKLDDT+FR
Sbjct: 115 VSGLPPSGSWQDLKDHMREAGDVCYADVQKDG---VGMVEYLRKEDMEYALRKLDDTKFR 171
Query: 189 N 189
+
Sbjct: 172 S 172
>gi|241849002|ref|XP_002415663.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
gi|215509877|gb|EEC19330.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
Length = 223
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 97/181 (53%), Positives = 120/181 (66%), Gaps = 24/181 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++EDLFYK+G+I I+LK PP + FVEFE+ RDAEDA RDGY
Sbjct: 10 IYVGNLPPDIRTKDIEDLFYKFGKITFIDLKNRRGPP-FAFVEFEDPRDAEDAAHARDGY 68
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G + G G G G GR +R S+YRV+
Sbjct: 69 DYDGYRLRVEFPRGSA--------------------PGRGGMGPGRGRGPPARRSQYRVL 108
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V +D GT GVV++ EDMKYA++KLDD+ FR
Sbjct: 109 VSGLPPSGSWQDLKDHMREAGDVCYADVFKD--GT-GVVEFLRYEDMKYAVKKLDDSRFR 165
Query: 189 N 189
+
Sbjct: 166 S 166
>gi|426247382|ref|XP_004017465.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 1 [Ovis
aries]
Length = 226
Score = 159 bits (403), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 117/181 (64%), Gaps = 24/181 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLPSD+RE ++EDLFYKYGRI +IELK + FV FE+ RDAEDAI GR+GY
Sbjct: 16 IYVGNLPSDVREKDLEDLFYKYGRISEIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ CRLRVE P + G G G +R S++RV+
Sbjct: 76 DYGQCRLRVEF--------PRTY-------------GGRGGWPRGGRSGPPTRRSDFRVL 114
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y EDM+YA+RKLD+T+FR
Sbjct: 115 VSGLPPSGSWQDLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKLDETKFR 171
Query: 189 N 189
+
Sbjct: 172 S 172
>gi|134085783|ref|NP_001076867.1| serine/arginine-rich splicing factor 9 [Bos taurus]
gi|358421698|ref|XP_003585083.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Bos taurus]
gi|133777441|gb|AAI14700.1| SFRS9 protein [Bos taurus]
gi|296478484|tpg|DAA20599.1| TPA: splicing factor, arginine/serine-rich 9 [Bos taurus]
Length = 221
Score = 159 bits (403), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 117/181 (64%), Gaps = 24/181 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLPSD+RE ++EDLFYKYGRI +IELK + FV FE+ RDAEDAI GR+GY
Sbjct: 16 IYVGNLPSDVREKDLEDLFYKYGRISEIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ CRLRVE P + G G G +R S++RV+
Sbjct: 76 DYGQCRLRVEF--------PRTY-------------GGRGGWPRGGRSGPPTRRSDFRVL 114
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y EDM+YA+RKLD+T+FR
Sbjct: 115 VSGLPPSGSWQDLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKLDETKFR 171
Query: 189 N 189
+
Sbjct: 172 S 172
>gi|308459677|ref|XP_003092154.1| hypothetical protein CRE_20061 [Caenorhabditis remanei]
gi|308254084|gb|EFO98036.1| hypothetical protein CRE_20061 [Caenorhabditis remanei]
Length = 336
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/290 (40%), Positives = 159/290 (54%), Gaps = 55/290 (18%)
Query: 8 TIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPR-PPCYCFVEFENARDAEDAIRGRD 66
T+YVGNLPSD+RE E+ED+F+KYG I +I++K R P + F++F++ RDA++A+R D
Sbjct: 5 TVYVGNLPSDVREKEIEDIFHKYGEIRNIDIKSRSRDSPAFAFIQFDDRRDAKEAVRACD 64
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
GY FDG RLRVE G R G G G G + S YR
Sbjct: 65 GYEFDGKRLRVEFPRGKGP---RGPGGRPTRDNGSRFGRNG----------GPPKRSNYR 111
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTE 186
+IV GLP S SWQD+KDH+++AG++C+A V GVV++ E+++YAIRK DDT+
Sbjct: 112 LIVEGLPRSGSWQDIKDHLKQAGEICYANV----HNGEGVVEFERYENLEYAIRKYDDTK 167
Query: 187 FRN---PWARGRITV---------KRYDRSPSRSRSR----------------------S 212
FR+ A R+ KR RS SRS+S S
Sbjct: 168 FRSHKGETAYIRLKEDKSEYAKENKRRTRSISRSKSPNRGRCSRSSSRSKSSIRGRRTGS 227
Query: 213 RSRSRSRSRIVRRNRSKSLERSVSRSVSRSMSASPVKSSRARSRSRSVSP 262
S+SRSRS + R++R +S S +R VSRS SP+ R R+RS S +P
Sbjct: 228 ASKSRSRSPVSRQHRDRSESGSPARRVSRSR--SPISRQR-RARSESGTP 274
>gi|321460885|gb|EFX71923.1| hypothetical protein DAPPUDRAFT_59706 [Daphnia pulex]
Length = 255
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/212 (50%), Positives = 134/212 (63%), Gaps = 7/212 (3%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++EDLFYK+G+I I+LK PP + FVEFE+ RDAEDA+ RDGY
Sbjct: 11 IYVGNLPPDIRTKDIEDLFYKFGKIAYIDLKNRRGPP-FAFVEFEDPRDAEDAVHARDGY 69
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG GG GG G G R +R + YRVI
Sbjct: 70 DYDGYRLRVEFPRGSQNSG-GGHSGGRGGDGGRGGGDGGGSNGGGRSRGPPARRTNYRVI 128
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP + SWQDLKDHMR+AGDVC+A+ +D GT G+V++ EDMKYAI+KLDD+ FR
Sbjct: 129 VTGLPPTGSWQDLKDHMREAGDVCYADTYKD--GT-GMVEFLRYEDMKYAIKKLDDSRFR 185
Query: 189 NPWARGRITVKRYDRSPSRSRSRSRSRSRSRS 220
+ G ++ R +R RSRS S
Sbjct: 186 S--HEGEVSYVRVKEDSGDGNGGTRDRSRSYS 215
>gi|387219571|gb|AFJ69494.1| splicing factor, arginine/serine-rich 1/9 [Nannochloropsis gaditana
CCMP526]
Length = 277
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/191 (47%), Positives = 117/191 (61%), Gaps = 27/191 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP D+RE +++DLFYKYGRI I++K P RPP Y FV FE+ RDA+DA+ RD Y
Sbjct: 5 IYVGNLPMDVRERDLDDLFYKYGRIRGIDIKRPSRPPAYAFVAFEDPRDAKDAVHYRDNY 64
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+FDG R+RVELA+ P D R G+GGG +++R+
Sbjct: 65 DFDGGRIRVELAN----ETPRRRDDR-GFGGG-------------------RNRTDFRLE 100
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V LP SWQDLKD+ + GDV +A+VSR+ E GVV++ EDM A RKLD + FR
Sbjct: 101 VSDLPDRTSWQDLKDYFKPVGDVLYADVSRNGE---GVVEFATKEDMFAAKRKLDGSTFR 157
Query: 189 NPWARGRITVK 199
NP+ I V+
Sbjct: 158 NPFDSREIRVR 168
>gi|158260889|dbj|BAF82622.1| unnamed protein product [Homo sapiens]
Length = 248
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/180 (53%), Positives = 116/180 (64%), Gaps = 16/180 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ +DAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPQDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG G SR SE RV+
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGG-------------GGGGGGAPRGRYGPPSRRSENRVV 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT G V++ EDM YA+RKLD+T+FR
Sbjct: 125 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD--GT-GAVEFVRKEDMTYAVRKLDNTKFR 181
>gi|26383576|dbj|BAC25546.1| unnamed protein product [Mus musculus]
Length = 248
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/200 (52%), Positives = 124/200 (62%), Gaps = 18/200 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG G SR +E RV+
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGG-------------GGGGGGAPRGRYGPPSRRAENRVV 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV+ EDM YA+RKLD+T+FR
Sbjct: 125 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD--GT-GVVECVPKEDMTYAVRKLDNTKFR 181
Query: 189 -NPWARGRIT-VKRYDRSPS 206
+ W I + RSPS
Sbjct: 182 SHEWETAYIPRIVDRPRSPS 201
>gi|158254720|dbj|BAF83333.1| unnamed protein product [Homo sapiens]
Length = 221
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/181 (50%), Positives = 116/181 (64%), Gaps = 24/181 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+D+RE ++EDLFYKYGRI +IELK + FV FE+ RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ CRLRVE P + G G G +R S++RV+
Sbjct: 76 DYGQCRLRVEF--------PRTY-------------GGRGGWPRGGRNGPPTRRSDFRVL 114
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGD C+A+V +D G+V+Y EDM+YA+RKLDDT+FR
Sbjct: 115 VSGLPPSGSWQDLKDHMREAGDACYADVQKDG---VGMVEYLRKEDMEYALRKLDDTKFR 171
Query: 189 N 189
+
Sbjct: 172 S 172
>gi|355754034|gb|EHH57999.1| hypothetical protein EGM_07756 [Macaca fascicularis]
Length = 248
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/180 (55%), Positives = 117/180 (65%), Gaps = 16/180 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ G RLRVE G G G S GG G SR SE RV+
Sbjct: 78 DYYGYRLRVEFPRSGRGTGRGGS-------------GGGGGGAPRGRYGPPSRRSENRVV 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ EDM YA+RKLD+T+FR
Sbjct: 125 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD--GT-GVVEFVRKEDMTYAVRKLDNTKFR 181
>gi|410915734|ref|XP_003971342.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Takifugu
rubripes]
Length = 238
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/182 (53%), Positives = 119/182 (65%), Gaps = 23/182 (12%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++EDLFYK+G I DI+LK P + FVEFE+ RD+ DA+ RDGY
Sbjct: 17 IYVGNLPPDIRSKDIEDLFYKFGAIRDIDLKNRRGGPPFAFVEFEDPRDSGDAVYERDGY 76
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFG-ISRHSEYRV 127
++DG RLRVE G G GG G G R+G SR S+YRV
Sbjct: 77 DYDGYRLRVEFPR-------------------GGRGGGGRGMGPPRTRYGPPSRRSDYRV 117
Query: 128 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
+V GLP S SWQDLKDHMR+AGDVC+ +V RD GT GVV++ EDM YA+RKLD+T+F
Sbjct: 118 VVSGLPQSGSWQDLKDHMREAGDVCYTDVYRD--GT-GVVEFVRKEDMTYAVRKLDNTKF 174
Query: 188 RN 189
R+
Sbjct: 175 RS 176
>gi|334327169|ref|XP_003340840.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 9-like [Monodelphis domestica]
Length = 220
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/181 (49%), Positives = 113/181 (62%), Gaps = 27/181 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYV NLP+D+RE ++EDLFYKYGRI DIELK + FV FE+ RDAEDAI GR+GY
Sbjct: 18 IYVENLPADVREKDLEDLFYKYGRIRDIELKNRRGLAPFAFVRFEDPRDAEDAIYGRNGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ CRLRVEL G G SR SE+RV+
Sbjct: 78 DYGQCRLRVELP------------------------RNPGGGGPRGRTGPPSRRSEFRVL 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AG VC+A+V +D GVV++ EDM+YA+R+LDD++FR
Sbjct: 114 VSGLPPSGSWQDLKDHMREAGGVCYADVQKDG---MGVVEFLRKEDMEYALRRLDDSKFR 170
Query: 189 N 189
+
Sbjct: 171 S 171
>gi|355565042|gb|EHH21531.1| hypothetical protein EGK_04623, partial [Macaca mulatta]
Length = 231
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/181 (53%), Positives = 116/181 (64%), Gaps = 16/181 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAED + GRDGY
Sbjct: 48 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDLRDAEDVVYGRDGY 107
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ G RLRVE PS G GG G SR SE RV+
Sbjct: 108 DYYGYRLRVEFP-------PSGRGTG------RGGSGGGGGGAPRGRYGPPSRRSENRVV 154
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ EDM YA+RKLD+T+FR
Sbjct: 155 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD--GT-GVVEFVRKEDMTYAVRKLDNTKFR 211
Query: 189 N 189
+
Sbjct: 212 S 212
>gi|148228289|ref|NP_001088400.1| serine/arginine-rich splicing factor 9 [Xenopus laevis]
gi|54261635|gb|AAH84289.1| LOC495254 protein [Xenopus laevis]
Length = 230
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/187 (50%), Positives = 117/187 (62%), Gaps = 27/187 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELK------IPPRPPCYCFVEFENARDAEDAI 62
IYVGNLPSDIRE E+EDLF +YGRI +ELK P + F+ +++ RDAEDA+
Sbjct: 18 IYVGNLPSDIREKELEDLFDRYGRIRTVELKNRGGSSAP-----FAFISYQDPRDAEDAV 72
Query: 63 RGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRH 122
GR+GY+F CRLRVE G G GG G+ SR
Sbjct: 73 FGRNGYDFGSCRLRVEFPRSFRGSGGGGG-------------GGGGYGGSRGRNGPPSRR 119
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKL 182
SEYRVIV GLP S SWQDLKDHMR+AGDVC+A+V +D G+V++ EDM+YA+RKL
Sbjct: 120 SEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVHKDG---MGIVEFIRKEDMEYALRKL 176
Query: 183 DDTEFRN 189
DDT+FR+
Sbjct: 177 DDTKFRS 183
>gi|355568562|gb|EHH24843.1| hypothetical protein EGK_08569 [Macaca mulatta]
Length = 292
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/180 (56%), Positives = 121/180 (67%), Gaps = 16/180 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ G RLRVE PS G GGGG GGA G SR SE RV+
Sbjct: 78 DYYGYRLRVEFP-------PSGRGTGRGGGGGGGGGAPRGRYGPP------SRRSENRVV 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GV+++ EDM YA+RKLD+T+FR
Sbjct: 125 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD--GT-GVMEFVRKEDMTYAVRKLDNTKFR 181
>gi|397525476|ref|XP_003832692.1| PREDICTED: serine/arginine-rich splicing factor 9 [Pan paniscus]
Length = 274
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/183 (50%), Positives = 117/183 (63%), Gaps = 34/183 (18%)
Query: 12 GNLPSDIREYEVEDLFYKYGRILDIELK-----IPPRPPCYCFVEFENARDAEDAIRGRD 66
GNLP+D+RE ++EDLFYKYGRI +IELK +P + FV FE+ RDAEDAI GR+
Sbjct: 72 GNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVP-----FAFVRFEDPRDAEDAIYGRN 126
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
GY++ CRLRVE YGG G GG +R S++R
Sbjct: 127 GYDYGQCRLRVEFPRT--------------YGGRGGWPRGGRNGPP-------TRRSDFR 165
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTE 186
V+V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y EDM+YA+RKLDDT+
Sbjct: 166 VLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDG---VGMVEYLRKEDMEYALRKLDDTK 222
Query: 187 FRN 189
FR+
Sbjct: 223 FRS 225
>gi|302828648|ref|XP_002945891.1| hypothetical protein VOLCADRAFT_72532 [Volvox carteri f.
nagariensis]
gi|300268706|gb|EFJ52886.1| hypothetical protein VOLCADRAFT_72532 [Volvox carteri f.
nagariensis]
Length = 288
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 117/189 (61%), Gaps = 21/189 (11%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R I+VGNLP D+RE E++++FYK+GRI I++K P RPP + F+EF++ R AE+A R R+
Sbjct: 10 RAIFVGNLPIDVREKELDEIFYKFGRIRMIDIKKPARPPGFAFIEFDDPRSAEEAARRRN 69
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
Y F G R+RVE+A GG G G S R GY I +R
Sbjct: 70 NYEFAGMRMRVEIARGGEGSG-SQQPLRIGYR-------------------PIRNTLGFR 109
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDS-EGTYGVVDYTNPEDMKYAIRKLDDT 185
+ V+GLP SASWQDLKD +R+ + E+ +D + GVV++ + +DMK A+RKLDD+
Sbjct: 110 LYVKGLPRSASWQDLKDFVRRVCKPLYTEIFKDHRDNVLGVVEFESKDDMKAALRKLDDS 169
Query: 186 EFRNPWARG 194
EF NP+ +G
Sbjct: 170 EFTNPFDKG 178
>gi|296490264|tpg|DAA32377.1| TPA: splicing factor, arginine/serine-rich 9-like [Bos taurus]
Length = 221
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 116/181 (64%), Gaps = 24/181 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+D+RE ++EDLFYKYG I +IELK + FV FE+ RDAEDA+ GR+GY
Sbjct: 16 IYVGNLPNDVREKDLEDLFYKYGHISEIELKNRHGLVPFAFVRFEDPRDAEDAVYGRNGY 75
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ CRLRVE P + G G G +R S++RV+
Sbjct: 76 DYGQCRLRVEF--------PRTY-------------GGRGGWPRGGRSGPPTRRSDFRVL 114
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y EDM+YA+RKLD+T+FR
Sbjct: 115 VSGLPPSGSWQDLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKLDETKFR 171
Query: 189 N 189
+
Sbjct: 172 S 172
>gi|297264540|ref|XP_001103237.2| PREDICTED: splicing factor, arginine/serine-rich 1-like [Macaca
mulatta]
Length = 300
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/181 (52%), Positives = 115/181 (63%), Gaps = 16/181 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAED + GRDGY
Sbjct: 70 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDLRDAEDVVYGRDGY 129
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ G RLRVE PS G GG G SR E RV+
Sbjct: 130 DYYGYRLRVEFP-------PSGRGTG------RGGSGGGGGGAPRGRYGPPSRRCENRVV 176
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GV+++ EDM YA+RKLD+T+FR
Sbjct: 177 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD--GT-GVMEFVRKEDMTYAVRKLDNTKFR 233
Query: 189 N 189
+
Sbjct: 234 S 234
>gi|52345494|ref|NP_001004795.1| serine/arginine-rich splicing factor 9 [Xenopus (Silurana)
tropicalis]
gi|49257722|gb|AAH74531.1| splicing factor, arginine/serine-rich 9 [Xenopus (Silurana)
tropicalis]
gi|89272901|emb|CAJ83204.1| splicing factor, arginine/serine-rich 9 [Xenopus (Silurana)
tropicalis]
Length = 225
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/187 (49%), Positives = 115/187 (61%), Gaps = 32/187 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELK------IPPRPPCYCFVEFENARDAEDAI 62
IYVGNLP+DIRE E+EDLF +YGRI IELK P + F+ F++ RDAEDA+
Sbjct: 18 IYVGNLPADIREKELEDLFDRYGRIRTIELKNRGGSSAAP----FAFISFQDPRDAEDAV 73
Query: 63 RGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRH 122
R+GY F CRLRVE G +GG G+ SR
Sbjct: 74 FARNGYEFGSCRLRVEFPRSFRG-------------------SGGGYGGSRGRNGPPSRR 114
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKL 182
SEYRVIV GLP S SWQDLKDHMR+AGDVC+A+V +D G+V++ EDM+YA+RKL
Sbjct: 115 SEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVHKDG---MGIVEFIRKEDMEYALRKL 171
Query: 183 DDTEFRN 189
DDT+FR+
Sbjct: 172 DDTKFRS 178
>gi|350646485|emb|CCD58884.1| arginine/serine-rich splicing factor, putative [Schistosoma
mansoni]
Length = 207
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/187 (52%), Positives = 119/187 (63%), Gaps = 28/187 (14%)
Query: 4 RFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPR-PPCYCFVEFENARDAEDAI 62
R + IYVGNLP D + ++E+LF KYG I I+LK R P + FVEFE+ DA DA+
Sbjct: 3 RTTHKIYVGNLPPDTKTRDIENLFSKYGPIAAIDLKAGQRRGPPFAFVEFEDELDASDAV 62
Query: 63 RGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRH 122
RGRDGYNFDG LRVEL R G G GGA G SR
Sbjct: 63 RGRDGYNFDGYALRVELP-------------RTGGFNRGGGGASGP-----------SRR 98
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKL 182
S++RVIV GLP + SWQDLKDHMR+AGDV +A+V RD GT GVV++ EDMKYAIR+L
Sbjct: 99 SDFRVIVTGLPPTGSWQDLKDHMREAGDVGYADVFRD--GT-GVVEFLRYEDMKYAIRRL 155
Query: 183 DDTEFRN 189
DD++FR+
Sbjct: 156 DDSKFRS 162
>gi|348532825|ref|XP_003453906.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Oreochromis
niloticus]
Length = 241
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/186 (50%), Positives = 116/186 (62%), Gaps = 31/186 (16%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELK-----IPPRPPCYCFVEFENARDAEDAIR 63
IYVGNLP D++E ++EDLFYKYG+I +IELK IP + FV FE+ RDA+DA+
Sbjct: 6 IYVGNLPMDVQERDIEDLFYKYGKIREIELKNNRGTIP-----FAFVRFEDPRDADDAVY 60
Query: 64 GRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHS 123
GR+GY + +LRVE Y G GG G +R S
Sbjct: 61 GRNGYGYGDSKLRVE------------------YPRSKPGPMGGGGGAPRGRFGPPTRRS 102
Query: 124 EYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLD 183
E+RVIV GLP S SWQDLKDHMR+AGDVCFA+V RD E GVV++ EDM+YA+R+LD
Sbjct: 103 EFRVIVSGLPPSGSWQDLKDHMREAGDVCFADVQRDGE---GVVEFLRREDMEYALRRLD 159
Query: 184 DTEFRN 189
TEFR+
Sbjct: 160 GTEFRS 165
>gi|339244049|ref|XP_003377950.1| splicing factor, arginine/serine-rich 1 [Trichinella spiralis]
gi|316973185|gb|EFV56805.1| splicing factor, arginine/serine-rich 1 [Trichinella spiralis]
Length = 300
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/197 (44%), Positives = 121/197 (61%), Gaps = 17/197 (8%)
Query: 3 GRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAI 62
GR IYVGNLP DIR ++E F ++G+++ ++LK PP + FVEFE+ARDAEDA+
Sbjct: 6 GRSDARIYVGNLPPDIRSRDIESCFERFGKVVAVDLKNRKGPP-FAFVEFEDARDAEDAV 64
Query: 63 RGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRH 122
R +DGY DG +LRVE G SG P GY AG G A SRH
Sbjct: 65 RYKDGYELDGYKLRVEFPRG-SGVHP-------GYNQRNRMLAGRNGCRTNA-----SRH 111
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKL 182
+ +R + GLP+S SWQDLKDHMR+AGDVCF++V ++ GVV+Y ED++YA+ L
Sbjct: 112 TGFRCYISGLPASGSWQDLKDHMREAGDVCFSDVYKNGN---GVVEYMRAEDLEYALANL 168
Query: 183 DDTEFRNPWARGRITVK 199
+++ FR+ + +K
Sbjct: 169 NESRFRSHEYTVNVNIK 185
>gi|159479816|ref|XP_001697982.1| SR protein factor [Chlamydomonas reinhardtii]
gi|158273781|gb|EDO99567.1| SR protein factor [Chlamydomonas reinhardtii]
Length = 320
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 113/188 (60%), Gaps = 21/188 (11%)
Query: 8 TIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDG 67
I+VGNLP D+RE E++++FYK+GRI I++K P RPP + FVEFE+ R AE+A R R+
Sbjct: 36 AIFVGNLPYDVREKELDEIFYKFGRIRMIDIKKPARPPGFAFVEFEDPRSAEEAARRRNN 95
Query: 68 YNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRV 127
Y F G R+RVE+A GG A GA G I +R+
Sbjct: 96 YEFAGMRMRVEIARGGE--------------------AAGAQQPLRIGYRPIRNTMGFRL 135
Query: 128 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDS-EGTYGVVDYTNPEDMKYAIRKLDDTE 186
V+ LP SASWQDLKD +R+ + EV +D+ + GVV++ + EDMK +RKLDDTE
Sbjct: 136 YVKNLPRSASWQDLKDFVRRVCKPLYTEVFKDNRDNVVGVVEFESKEDMKATVRKLDDTE 195
Query: 187 FRNPWARG 194
F NP+ +G
Sbjct: 196 FANPFDKG 203
>gi|405968123|gb|EKC33223.1| Splicing factor, arginine/serine-rich 1 [Crassostrea gigas]
Length = 232
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/181 (55%), Positives = 122/181 (67%), Gaps = 10/181 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNLP DIR ++EDLFYK+G+I ++LK PP +CFVEFE+ RDA DA+ RDGY
Sbjct: 9 VYVGNLPPDIRARDIEDLFYKFGKIAFVDLKTRRGPP-FCFVEFEDPRDASDAVHERDGY 67
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
N+DG LRVE GG G S GGGG G G G SR SEYRV+
Sbjct: 68 NYDGYTLRVEFPRGGGPGGSRSR------GGGGGYGFRGGRGPPGGRGGPPSRRSEYRVL 121
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+ +V +D GT GVV++ EDMK+A+ KLDDT+FR
Sbjct: 122 VSGLPPSGSWQDLKDHMREAGDVCYTDVYKD--GT-GVVEFLRKEDMKHAVSKLDDTKFR 178
Query: 189 N 189
+
Sbjct: 179 S 179
>gi|56758822|gb|AAW27551.1| SJCHGC05822 protein [Schistosoma japonicum]
gi|226469552|emb|CAX76606.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469554|emb|CAX76607.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469556|emb|CAX76608.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469558|emb|CAX76609.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469560|emb|CAX76610.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469562|emb|CAX76611.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469564|emb|CAX76612.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226472960|emb|CAX71166.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226472964|emb|CAX71168.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226472966|emb|CAX71169.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
Length = 225
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/187 (52%), Positives = 122/187 (65%), Gaps = 10/187 (5%)
Query: 4 RFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPR-PPCYCFVEFENARDAEDAI 62
R + IYVGNLP D + ++E+LF KYG I I+LK R P + FVEFE+ DA DA+
Sbjct: 3 RTTHKIYVGNLPPDAKTRDIENLFSKYGPIAAIDLKAGQRRGPPFAFVEFEDELDASDAV 62
Query: 63 RGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRH 122
RGRDGYNFDG LRVEL GS + + GG GG G+ SR
Sbjct: 63 RGRDGYNFDGYALRVELPRTGSYNNGNGGPNNNQFRRGGFNRGGGGGSSGP------SRR 116
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKL 182
S++RVIV GLP + SWQDLKDHMR+AGDV +A+V RD GT GVV++ EDMKYAIR+L
Sbjct: 117 SDFRVIVTGLPPTGSWQDLKDHMREAGDVGYADVFRD--GT-GVVEFLRYEDMKYAIRRL 173
Query: 183 DDTEFRN 189
DD++FR+
Sbjct: 174 DDSKFRS 180
>gi|297693630|ref|XP_002824116.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Pongo
abelii]
Length = 221
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/181 (48%), Positives = 114/181 (62%), Gaps = 24/181 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+D+RE ++EDLFYKYGRI ++ELK + FV E+ RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREMELKNRHGLVPFAFVRLEDPRDAEDAIYGRNGY 75
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ CRLRVE P + G G G +R S++RV+
Sbjct: 76 DYGQCRLRVEF--------PRTY-------------GGRGGWPRGGRNGPPTRRSDFRVL 114
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y EDM+YA+RKL DT+F
Sbjct: 115 VSGLPPSGSWQDLKDHMREAGDVCYADVRKDG---VGMVEYLRKEDMEYALRKLHDTKFH 171
Query: 189 N 189
+
Sbjct: 172 S 172
>gi|357134013|ref|XP_003568614.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor SF2-like
[Brachypodium distachyon]
Length = 169
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/186 (50%), Positives = 110/186 (59%), Gaps = 45/186 (24%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYK--------------------------YGRIL 34
MS S T+Y+GNLP+DIRE E EDLFYK YGRIL
Sbjct: 1 MSRWNSCTVYLGNLPNDIREREHEDLFYKDGVTPHHLDSTCGYHPIWVMQEDLHKYGRIL 60
Query: 35 DIELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRR 94
DI+LK PPR P Y FVE DAEDAI G DGY+F ++VELAHGG+G S DR
Sbjct: 61 DIDLKXPPRRPVYAFVEVIYRCDAEDAIYGHDGYDFX--IIQVELAHGGTG---PSFDRL 115
Query: 95 GGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFA 154
Y + +GR +RHS YRV+V GLPSSASWQDLKDHMR+AGDVCF+
Sbjct: 116 RSY--------------SSSGRREAARHSNYRVMVTGLPSSASWQDLKDHMRRAGDVCFS 161
Query: 155 EVSRDS 160
+V R++
Sbjct: 162 DVYREA 167
>gi|449529130|ref|XP_004171554.1| PREDICTED: pre-mRNA-splicing factor SF2-like, partial [Cucumis
sativus]
Length = 158
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 69/79 (87%), Positives = 74/79 (93%)
Query: 128 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGT+G+VDYTN +DMKYAIRKLDDTEF
Sbjct: 1 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEF 60
Query: 188 RNPWARGRITVKRYDRSPS 206
RNPWAR I VK+YD SP+
Sbjct: 61 RNPWARAYIRVKKYDGSPT 79
>gi|291407986|ref|XP_002720309.1| PREDICTED: splicing factor, arginine/serine-rich 1 [Oryctolagus
cuniculus]
Length = 343
Score = 149 bits (377), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 88/180 (48%), Positives = 111/180 (61%), Gaps = 22/180 (12%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DI EV+D+FYKYG + D++LK + FVEF + RDA +A+ GRDGY
Sbjct: 17 IYVGNLPPDIGTREVKDMFYKYGTVRDVDLKNRRWGRPFAFVEFNSPRDAHNAVHGRDGY 76
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+++G RLRVE + R YGGG G R SR S+ RV+
Sbjct: 77 DYEGYRLRVEFPR----------NYRAIYGGG---------RGLLETRGTSSRRSDNRVL 117
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AG VC+A V RD GVV++ EDM YA+RKL++T+FR
Sbjct: 118 VSGLPPSGSWQDLKDHMREAGYVCYAAVRRDGS---GVVEFVWKEDMSYAVRKLNNTKFR 174
>gi|384950064|gb|AFI38637.1| serine/arginine-rich splicing factor 9 [Macaca mulatta]
Length = 216
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 114/181 (62%), Gaps = 29/181 (16%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+D+RE ++EDLFYKYGRI +IELK + FV FE+ RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKTRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ CRLRVE P + G G G +R S++RV+
Sbjct: 76 DYGQCRLRVEF--------PRTY-------------GGRGGWPRGGRNGPPTRRSDFRVL 114
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V G SWQDLKDHMR+AGDVC+A+V +D G+V+Y EDM+YA+RKLDDT+FR
Sbjct: 115 VSG-----SWQDLKDHMREAGDVCYADVQKDG---VGMVEYLRKEDMEYALRKLDDTKFR 166
Query: 189 N 189
+
Sbjct: 167 S 167
>gi|268563921|ref|XP_002647045.1| C. briggsae CBR-RSP-3 protein [Caenorhabditis briggsae]
Length = 234
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/184 (46%), Positives = 112/184 (60%), Gaps = 30/184 (16%)
Query: 6 SRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGR 65
+ +YVGNLP+D+R+ EVED+F+KYGRI I++K R P + F+EFE+ RDAEDA+R R
Sbjct: 7 DQKVYVGNLPADVRDKEVEDIFHKYGRIKYIDVK-SGRGPAFAFIEFEDNRDAEDAVRAR 65
Query: 66 DGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
DGY FDG R+RVE G RGP + R A
Sbjct: 66 DGYEFDGRRIRVEFTRGVGPRGPVAQSTRKEVATVEAVTI-------------------- 105
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
+ +DLKDHMR+AGDVC+A+V+RD GT GVV++T +D+KYAIRKLDDT
Sbjct: 106 ------VEDVVVVKDLKDHMREAGDVCYADVARD--GT-GVVEFTRYDDVKYAIRKLDDT 156
Query: 186 EFRN 189
+FR+
Sbjct: 157 KFRS 160
>gi|383422447|gb|AFH34437.1| serine/arginine-rich splicing factor 9 [Macaca mulatta]
Length = 216
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 114/181 (62%), Gaps = 29/181 (16%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+D+RE ++EDLFYKYGRI +IELK + FV FE+ RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ CRLRVE P + G G G +R S++RV+
Sbjct: 76 DYGQCRLRVEF--------PRTY-------------GGRGGWPRGGRNGPPTRRSDFRVL 114
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V G SWQDLKDHMR+AGDVC+A+V +D G+V+Y EDM+YA+RKLDDT+FR
Sbjct: 115 VSG-----SWQDLKDHMREAGDVCYADVQKDG---VGMVEYLRKEDMEYALRKLDDTKFR 166
Query: 189 N 189
+
Sbjct: 167 S 167
>gi|149053805|gb|EDM05622.1| rCG34610, isoform CRA_a [Rattus norvegicus]
Length = 214
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 86/181 (47%), Positives = 104/181 (57%), Gaps = 50/181 (27%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G
Sbjct: 78 DYDGYRLRVEFPRSGR-------------------------------------------- 93
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
LP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ EDM YA+RKLD+T+FR
Sbjct: 94 ---LPPSGSWQDLKDHMREAGDVCYADVYRD--GT-GVVEFVRKEDMTYAVRKLDNTKFR 147
Query: 189 N 189
+
Sbjct: 148 S 148
>gi|167515992|ref|XP_001742337.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778961|gb|EDQ92575.1| predicted protein [Monosiga brevicollis MX1]
Length = 164
Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 83/179 (46%), Positives = 110/179 (61%), Gaps = 34/179 (18%)
Query: 6 SRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGR 65
SR +YVGNLP DIRE E+++LFYKYGRILDI +K P Y FV FE+ RDAEDA+ GR
Sbjct: 5 SRRVYVGNLPRDIRERELDELFYKYGRILDIHIKGP-----YAFVTFEDERDAEDAVHGR 59
Query: 66 DGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
DG NF G RLRVEL++ G RG + D G +HSE+
Sbjct: 60 DGINFAGGRLRVELSNPGR-RGANPRDNFSG------------------------KHSEF 94
Query: 126 RVIVRGLPSSASWQDLKDHMRKA-GDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLD 183
RV+++GLP +ASWQD+KD + DV F +V+RD G+ ++ N EDM +A+ K++
Sbjct: 95 RVLIKGLPRTASWQDVKDFFKDERLDVVFTDVNRDG---VGMAEFGNQEDMNFALDKMN 150
>gi|12860555|dbj|BAB31986.1| unnamed protein product [Mus musculus]
Length = 190
Score = 146 bits (368), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 105/165 (63%), Gaps = 24/165 (14%)
Query: 25 DLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGS 84
DLFYKYGRI +IELK + FV FE+ RDAEDAI GR+GY++ CRLRVE
Sbjct: 1 DLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEF----- 55
Query: 85 GRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDH 144
P + RGG+ G G +R S++RV+V GLP S SWQDLKDH
Sbjct: 56 ---PRTYGGRGGWPRGARNGPP-------------TRRSDFRVLVSGLPPSGSWQDLKDH 99
Query: 145 MRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFRN 189
MR+AGDVC+A+V +D G+V+Y EDM+YA+RKLDDT+FR+
Sbjct: 100 MREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKLDDTKFRS 141
>gi|21954085|gb|AAK93589.2| putative SF2/ASF splicing modulator Srp30 protein [Arabidopsis
thaliana]
Length = 207
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/151 (54%), Positives = 98/151 (64%), Gaps = 19/151 (12%)
Query: 62 IRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISR 121
I GRDGY+FDGCRLRVE+AHGG PS + + + SR
Sbjct: 1 IYGRDGYDFDGCRLRVEIAHGGRRFSPSVD----------------RYSSSYSASRAPSR 44
Query: 122 HSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRK 181
S+Y V+V GLP SASWQDLKDHMRKAGDVCF+EV D +G GVVDY+N +DMKYAIRK
Sbjct: 45 RSDYHVLVTGLPPSASWQDLKDHMRKAGDVCFSEVFPDRKGMSGVVDYSNYDDMKYAIRK 104
Query: 182 LDDTEFRNPWARGRITVKRYDRSPSRSRSRS 212
LD TEFRN ++ I V+ Y+ SRS SRS
Sbjct: 105 LDATEFRNAFSSAYIRVREYE---SRSVSRS 132
>gi|326433655|gb|EGD79225.1| splicing factor [Salpingoeca sp. ATCC 50818]
Length = 255
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/197 (46%), Positives = 119/197 (60%), Gaps = 34/197 (17%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R IYVGNLP DIRE E++DLFYK+GRI +I +K P Y FV FE++RDAEDA+R RD
Sbjct: 4 RRIYVGNLPYDIREREIDDLFYKFGRIEEITIKGP-----YAFVSFEDSRDAEDAVRRRD 58
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
GY F G RLRVE A+GG RR GA A G +HSE+R
Sbjct: 59 GYEFGGGRLRVEFANGG---------RR----------ERGARAFNG-------QHSEFR 92
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTE 186
+ V LP +ASWQD+KD R+AG+V FAEV D GT G+V++ +DM++A+R L++ +
Sbjct: 93 LRVSNLPRTASWQDVKDFCREAGEVLFAEVFHD--GT-GLVEFRREDDMEWALRNLNERK 149
Query: 187 FRNPWARGRITVKRYDR 203
R+ I DR
Sbjct: 150 LRSHLGDSDIVTLVEDR 166
>gi|91085405|ref|XP_967263.1| PREDICTED: similar to GA20008-PA [Tribolium castaneum]
gi|270009156|gb|EFA05604.1| hypothetical protein TcasGA2_TC015810 [Tribolium castaneum]
Length = 226
Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 110/243 (45%), Positives = 139/243 (57%), Gaps = 34/243 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR +++DLFYK+G++ ++LK PP + FVEFE+ RDA+DA+ RDGY
Sbjct: 10 IYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRRGPP-FAFVEFEDPRDADDAVHARDGY 68
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE P GG G G G + G A R S++RV+
Sbjct: 69 DYDGYRLRVEF--------PRGGGHGSFRGGRGGGDRGRSSRGPPA------RRSQFRVL 114
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVCFA+ +D G VV++ EDMKYAI+KLDD+ FR
Sbjct: 115 VTGLPPSGSWQDLKDHMREAGDVCFADAFKDGSG---VVEFLRYEDMKYAIKKLDDSRFR 171
Query: 189 NPWARGRITVKRYDRSPSRSRSRSRSRSRSRSRIVRRNRSKSLERSVSRSVSRSMSASPV 248
+ G ++ R S RS RSRSRS S S + SPV
Sbjct: 172 S--HEGEVSYIRVKEDRGGSDRRSGGRSRSRSY--------------SPRRRGSPTYSPV 215
Query: 249 KSS 251
K S
Sbjct: 216 KRS 218
>gi|148669918|gb|EDL01865.1| splicing factor, arginine/serine-rich 1 (ASF/SF2), isoform CRA_c
[Mus musculus]
Length = 212
Score = 143 bits (360), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 107/192 (55%), Gaps = 53/192 (27%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE
Sbjct: 78 DYDGYRLRVEFP------------------------------------------------ 89
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
R LP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ EDM YA+RKLD+T+FR
Sbjct: 90 -RRLPPSGSWQDLKDHMREAGDVCYADVYRD--GT-GVVEFVRKEDMTYAVRKLDNTKFR 145
Query: 189 -NPWARGRITVK 199
+ I VK
Sbjct: 146 SHEGETAYIRVK 157
>gi|221504321|gb|EEE29996.1| arginine/serine-rich splicing factor, putative [Toxoplasma gondii
VEG]
Length = 513
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/215 (44%), Positives = 123/215 (57%), Gaps = 17/215 (7%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIP-PRPPCYCFVEFENARDAEDAIRGRDG 67
I+V NLP D+ E E+EDLFYK+GRI DIE++ FV+F + A+DAI GRDG
Sbjct: 22 IFVANLPLDVTENELEDLFYKFGRIEDIEMRRDRTNDSTIAFVQFAEYKAADDAIEGRDG 81
Query: 68 YNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRV 127
+ R+R+E R R G + G G G G +G R SE+RV
Sbjct: 82 AHLGFHRIRIE-------RSRQRLRRPGEFRRDRGGYGGRESGGNGPA-YGPPRRSEFRV 133
Query: 128 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V GLP +ASWQDLKDHMR+AGDV +A + EG GVV+Y+N +DM YA+RKL + F
Sbjct: 134 RVYGLPPTASWQDLKDHMRRAGDVGYANI----EGGVGVVEYSNGDDMDYALRKLHGSVF 189
Query: 188 RNPWARGRITVKR---YDRSPSRSR-SRSRSRSRS 218
RN + +I V+R D PSR R S R R R
Sbjct: 190 RNIFHTAKIRVERDLGDDYVPSRRRPSLGRERDRQ 224
>gi|237841065|ref|XP_002369830.1| splicing factor, putative [Toxoplasma gondii ME49]
gi|211967494|gb|EEB02690.1| splicing factor, putative [Toxoplasma gondii ME49]
Length = 512
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/215 (44%), Positives = 123/215 (57%), Gaps = 17/215 (7%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIP-PRPPCYCFVEFENARDAEDAIRGRDG 67
I+V NLP D+ E E+EDLFYK+GRI DIE++ FV+F + A+DAI GRDG
Sbjct: 22 IFVANLPLDVTENELEDLFYKFGRIEDIEMRRDRTNDSTIAFVQFAEYKAADDAIEGRDG 81
Query: 68 YNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRV 127
+ R+R+E R R G + G G G G +G R SE+RV
Sbjct: 82 AHLGFHRIRIE-------RSRQRLRRPGEFRRDRGGYGGRESGGNGPA-YGPPRRSEFRV 133
Query: 128 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V GLP +ASWQDLKDHMR+AGDV +A + EG GVV+Y+N +DM YA+RKL + F
Sbjct: 134 RVYGLPPTASWQDLKDHMRRAGDVGYANI----EGGVGVVEYSNGDDMDYALRKLHGSVF 189
Query: 188 RNPWARGRITVKR---YDRSPSRSR-SRSRSRSRS 218
RN + +I V+R D PSR R S R R R
Sbjct: 190 RNIFHTAKIRVERDLGDDYVPSRRRPSLGRERDRQ 224
>gi|221483656|gb|EEE21968.1| hypothetical protein TGGT1_121760 [Toxoplasma gondii GT1]
Length = 513
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/215 (44%), Positives = 123/215 (57%), Gaps = 17/215 (7%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIP-PRPPCYCFVEFENARDAEDAIRGRDG 67
I+V NLP D+ E E+EDLFYK+GRI DIE++ FV+F + A+DAI GRDG
Sbjct: 22 IFVANLPLDVTENELEDLFYKFGRIEDIEMRRDRTNDSTIAFVQFAEYKAADDAIEGRDG 81
Query: 68 YNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRV 127
+ R+R+E R R G + G G G G +G R SE+RV
Sbjct: 82 AHLGFHRIRIE-------RSRQRLRRPGEFRRDRGGYGGRESGGNGPA-YGPPRRSEFRV 133
Query: 128 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V GLP +ASWQDLKDHMR+AGDV +A + EG GVV+Y+N +DM YA+RKL + F
Sbjct: 134 RVYGLPPTASWQDLKDHMRRAGDVGYANI----EGGVGVVEYSNGDDMDYALRKLHGSVF 189
Query: 188 RNPWARGRITVKR---YDRSPSRSR-SRSRSRSRS 218
RN + +I V+R D PSR R S R R R
Sbjct: 190 RNIFHTAKIRVERDLGDDYVPSRRRPSLGRERDRQ 224
>gi|340371197|ref|XP_003384132.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Amphimedon
queenslandica]
Length = 242
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 85/181 (46%), Positives = 116/181 (64%), Gaps = 13/181 (7%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNLP DIR+ ++ED+FYKYG+++D++L P + F+EFE+ RDA+DAIRGRDGY
Sbjct: 11 VYVGNLPGDIRKRDLEDIFYKYGKLVDVDLHDRRETP-FAFIEFEDPRDADDAIRGRDGY 69
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
FDG +LRVEL GY GGG G G G +G ++++
Sbjct: 70 MFDGYKLRVELPRSSPRYVGGRGGGGRGYYGGGRRDGYGRGGGRQSG---------HKLM 120
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
+ GLP + SWQD+KDH R+AGDV +A V RD GT GVV++ E K A+R LDD++FR
Sbjct: 121 ITGLPPTGSWQDIKDHFRQAGDVIYANVERD--GT-GVVEFARYEHAKRAVRDLDDSKFR 177
Query: 189 N 189
+
Sbjct: 178 S 178
>gi|49037494|gb|AAT49042.1| splice factor [Toxoplasma gondii]
Length = 345
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 87/193 (45%), Positives = 114/193 (59%), Gaps = 13/193 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIP-PRPPCYCFVEFENARDAEDAIRGRDG 67
I+V NLP D+ E E+EDLFYK+GRI DIE++ FV+F + A+DAI GRDG
Sbjct: 22 IFVANLPLDVTENELEDLFYKFGRIEDIEMRRDRTNDSTIAFVQFAEYKAADDAIEGRDG 81
Query: 68 YNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRV 127
+ R+R+E R R G + G G G G +G R SE+RV
Sbjct: 82 AHLGFHRIRIE-------RSRQRLRRPGEFRRDRGGYGGRESGGNGPA-YGPPRRSEFRV 133
Query: 128 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V GLP +ASWQDLKDHMR+AGDV +A + EG GVV+Y+N +DM YA+RKL + F
Sbjct: 134 RVYGLPPTASWQDLKDHMRRAGDVGYANI----EGGVGVVEYSNGDDMDYALRKLHGSVF 189
Query: 188 RNPWARGRITVKR 200
RN + +I V+R
Sbjct: 190 RNIFHTAKIRVER 202
>gi|401399758|ref|XP_003880627.1| cDNA FLJ53078, highly similar to Splicing
factor,arginine/serine-rich 1, related [Neospora caninum
Liverpool]
gi|325115038|emb|CBZ50594.1| cDNA FLJ53078, highly similar to Splicing
factor,arginine/serine-rich 1, related [Neospora caninum
Liverpool]
Length = 448
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 112/193 (58%), Gaps = 13/193 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIP-PRPPCYCFVEFENARDAEDAIRGRDG 67
I+V NLP D+ E E+EDLFYK+GRI DIEL+ FV+F + + A++AI GRDG
Sbjct: 23 IFVANLPLDVTENELEDLFYKFGRIEDIELRRDRTNDSTIAFVQFADYKAADEAIEGRDG 82
Query: 68 YNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRV 127
R+R+E + RR G G G G +G R SE+RV
Sbjct: 83 TRLGFHRIRIERSR--------QRLRRPGEFGRSDRSGYGREGGGSGPAYGPPRRSEFRV 134
Query: 128 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V GLP +ASWQDLKDHMR+AGDV +A + +G GVV+Y+N DM YA+RKL + F
Sbjct: 135 RVYGLPPTASWQDLKDHMRRAGDVGYANI----DGGVGVVEYSNGSDMDYALRKLHGSVF 190
Query: 188 RNPWARGRITVKR 200
RN + +I V+R
Sbjct: 191 RNIFHTAKIRVER 203
>gi|428673079|gb|EKX73992.1| pre-mRNA splicing factor, putative [Babesia equi]
Length = 325
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 113/215 (52%), Gaps = 23/215 (10%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKI--PPRPPCYCFVEFENARDAEDAIRGRD 66
++VGNLP + + ++ ++F KYG I DI++K Y F+EFE+ R AEDA+ RD
Sbjct: 15 VFVGNLPEKVDDRDIHEIFDKYGEIRDIDIKHGKTSNYTSYAFIEFESVRSAEDAVECRD 74
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
GY FD RLRVE A G S R Y G+ R+ ++YR
Sbjct: 75 GYEFDRYRLRVEFA----GEKKSRRHPRSSYEDRGS-------------RYPPPTRTDYR 117
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTE 186
+++ LP WQ LKDHMRKAG V + + + G VD+ + DMKYA+RKLD TE
Sbjct: 118 LVISNLPHGCRWQHLKDHMRKAGPVGYVNI----QHGRGYVDFMHKSDMKYALRKLDGTE 173
Query: 187 FRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRSR 221
RI +K+ D SRSR R RS SR R
Sbjct: 174 LSTSEDSARIRIKKDDYRRSRSRDAYRRRSHSRGR 208
>gi|428162693|gb|EKX31812.1| hypothetical protein GUITHDRAFT_82780, partial [Guillardia theta
CCMP2712]
Length = 208
Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 82/176 (46%), Positives = 103/176 (58%), Gaps = 21/176 (11%)
Query: 11 VGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGR-DGYN 69
VGNLP DIR +VEDLFYKYGR+ P PP + FV FE DAEDA+RGR DG
Sbjct: 5 VGNLPLDIRTRDVEDLFYKYGRL-------PTIPPAFAFVSFEYPEDAEDAVRGRADGVM 57
Query: 70 FDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRH---SEYR 126
F+G RLRVE++ SS D +GG G G + AG R S++R
Sbjct: 58 FEGQRLRVEMSR-------SSQDGYVEWGGSWVGKEEDGGRASQAGNRAPPRDLRRSDHR 110
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKL 182
+I+ GLP SASWQDLKD R AG+V F++V R G+V++ N D +YAI K+
Sbjct: 111 IIISGLPPSASWQDLKDFFRSAGEVIFSDVDRQGG---GIVEFANKSDQEYAISKV 163
>gi|324516767|gb|ADY46629.1| Splicing factor, arginine/serine-rich 3 [Ascaris suum]
Length = 210
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/151 (51%), Positives = 98/151 (64%), Gaps = 15/151 (9%)
Query: 39 KIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYG 98
+I R F+EF++ RDA DA+RGRDGY+FDGCRLRVEL G RGP Y
Sbjct: 6 QIHTRRTILSFIEFDDPRDARDAVRGRDGYSFDGCRLRVELTRGVGPRGPGGRPL---YA 62
Query: 99 GGGAGGAGGAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSR 158
A +G YRV++ GLP+S SWQDLKDHMR+AGD+C+AEVS+
Sbjct: 63 AEQMSPRRRAPPPRRSG---------YRVVISGLPASGSWQDLKDHMREAGDICYAEVSK 113
Query: 159 DSEGTYGVVDYTNPEDMKYAIRKLDDTEFRN 189
D GT GVV+Y N +DMKYA+RKLDDT+F++
Sbjct: 114 D--GT-GVVEYINYDDMKYAVRKLDDTKFKS 141
>gi|402581303|gb|EJW75251.1| alternative splicing regulator, partial [Wuchereria bancrofti]
Length = 217
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/235 (45%), Positives = 134/235 (57%), Gaps = 34/235 (14%)
Query: 49 FVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGA 108
F + E+ RDA DA+ GRDGY+FDGCR+RVEL G RGP YG G
Sbjct: 1 FGKLEDCRDARDAVHGRDGYDFDGCRIRVELTRGVGPRGPGGR---PLYGPDPRSPRRGP 57
Query: 109 GAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVD 168
S YRVIV GLP + SWQDLKDHMR AG++C+A+V RD GT GVV+
Sbjct: 58 PPRR----------SGYRVIVSGLPDTGSWQDLKDHMRDAGEICYADVFRD--GT-GVVE 104
Query: 169 YTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDR----SPSRSRSRSRSRSRSRS---- 220
YTN EDMKYA+RKLDDT+F++ G +T R SP+RSRSRS + ++RS
Sbjct: 105 YTNYEDMKYALRKLDDTKFKS--HEGEVTYIRVKEANINSPNRSRSRSHTPRKTRSSPKY 162
Query: 221 ------RIVRRNRSKSLERSVSRSVSRSMSASPVKSSRARSRSRSVSPDKVRSGS 269
R S+S S + V R S SPV SS +RS S++ S + RSGS
Sbjct: 163 SPTRSPSKSRSRSSRSRSHSRTSFVRR--STSPVHSSNSRSPSKTRSKTRSRSGS 215
>gi|307173759|gb|EFN64546.1| Splicing factor, arginine/serine-rich 1 [Camponotus floridanus]
Length = 262
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 77/151 (50%), Positives = 101/151 (66%), Gaps = 7/151 (4%)
Query: 39 KIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYG 98
K+ P+ ++RDAEDA+ RDGY++DG RLRVE GG GPS++ RGG G
Sbjct: 54 KLEPKSKAPIISLQNDSRDAEDAVHARDGYDYDGYRLRVEFPRGG---GPSNN-FRGGRG 109
Query: 99 GGGAGGAGGAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSR 158
G +G G GR +R S+YRV+V GLP + SWQDLKDHMR+AGDVCFA+V +
Sbjct: 110 AGDSGRGGRGEMSNSRGRGPPARRSQYRVLVSGLPPTGSWQDLKDHMREAGDVCFADVYK 169
Query: 159 DSEGTYGVVDYTNPEDMKYAIRKLDDTEFRN 189
D GT GVV++ +DMKYA++KLDD+ FR+
Sbjct: 170 D--GT-GVVEFLRHDDMKYAVKKLDDSRFRS 197
>gi|399216785|emb|CCF73472.1| unnamed protein product [Babesia microti strain RI]
Length = 230
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 108/195 (55%), Gaps = 40/195 (20%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPR--PPCYCFVEFENARDAEDAIRGRD 66
IYV NLP DI E+E++D FYK+GRI I +K R CY ++EF+++ +DAI+ RD
Sbjct: 8 IYVANLPPDITEHELDDKFYKFGRIRQITIKQSRRRDDECYAYIEFDSSSSVDDAIKYRD 67
Query: 67 GYNFDGCRLRVELAH---GGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHS 123
GY F R+ V++ G S RGP +
Sbjct: 68 GYKFGRYRIFVDILREKGGKSSRGPP-------------------------------MRT 96
Query: 124 EYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLD 183
+YRVIV LPSSASWQDLKDHMRKAG V ++ V+R G V+Y +DM++A+ LD
Sbjct: 97 DYRVIVDNLPSSASWQDLKDHMRKAGPVGYSSVNRGK----GYVEYETKKDMEWALENLD 152
Query: 184 DTEFRNPWARGRITV 198
+EF+N +++ I V
Sbjct: 153 KSEFKNIYSKSIIRV 167
>gi|221130501|ref|XP_002159641.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Hydra
magnipapillata]
Length = 265
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/183 (43%), Positives = 113/183 (61%), Gaps = 18/183 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRI--LDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+YVGNLP ++ ++EDLF KYG I +DI + P + F+EFE+ RDA DA+ G+D
Sbjct: 14 VYVGNLPQFVKNRDIEDLFDKYGPIKAIDIHNRFDP---AFAFLEFEDPRDASDAVYGKD 70
Query: 67 GYNFDGCRLRVELA-HGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
G F+G R+RV+ + +GR + S GGG G G R SE
Sbjct: 71 GERFEGQRIRVQFPRNSAAGRERTESGSNNNGGGGYVRGRGRGPP---------IRRSEN 121
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
RV+V GLP + SWQDLKDHMR+AG+V +A+V +D GT V ++ N EDMK+A++ LDD+
Sbjct: 122 RVLVSGLPPTGSWQDLKDHMREAGEVLYADVYKD--GT-AVCEFANYEDMKWAVKYLDDS 178
Query: 186 EFR 188
+F+
Sbjct: 179 KFK 181
>gi|412989158|emb|CCO15749.1| predicted protein [Bathycoccus prasinos]
Length = 347
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/202 (44%), Positives = 112/202 (55%), Gaps = 11/202 (5%)
Query: 8 TIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDG 67
TI+VGNLP DIRE E++DLFYKYGRI+ I++ PP + F+EFE+ RDAEDA RDG
Sbjct: 16 TIFVGNLPLDIRERELDDLFYKYGRIVHIKMPRCNHPPAFAFIEFEDKRDAEDAQYYRDG 75
Query: 68 YNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAG---------AGRFG 118
Y FDG RLRVE++ G SG G R GG G GG G+ G F
Sbjct: 76 YEFDGNRLRVEISKGSSGGGGFGGTRDDRGGGERGGRGGGRFGGSADERGGGRGGRGSFE 135
Query: 119 ISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEG--TYGVVDYTNPEDMK 176
R +E+ V+VR LP ASWQDLKD R++G V +A DS G VD+ D +
Sbjct: 136 RPRRTEFCVVVRNLPPRASWQDLKDFFRRSGKVTYANAFIDSNTGEQIGEVDFEYLTDAE 195
Query: 177 YAIRKLDDTEFRNPWARGRITV 198
A D EF N + +I
Sbjct: 196 NACDDCDGIEFENRFGVSKIQC 217
>gi|119614893|gb|EAW94487.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_b [Homo sapiens]
Length = 230
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/180 (48%), Positives = 103/180 (57%), Gaps = 34/180 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR + G P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKN------RRGG------------PPFAFVEFEDPRDAEDAVYGRDGY 59
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG G SR SE RV+
Sbjct: 60 DYDGYRLRVEFPRSGRGTGRGGG-------------GGGGGGAPRGRYGPPSRRSENRVV 106
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ EDM YA+RKLD+T+FR
Sbjct: 107 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD--GT-GVVEFVRKEDMTYAVRKLDNTKFR 163
>gi|301104435|ref|XP_002901302.1| splicing factor, arginine/serine-rich, putative [Phytophthora
infestans T30-4]
gi|262100777|gb|EEY58829.1| splicing factor, arginine/serine-rich, putative [Phytophthora
infestans T30-4]
Length = 214
Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 95/179 (53%), Gaps = 35/179 (19%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VGNLP D+RE E+ D F +YGRI + +K P RPP + F+ +EN +DA DA+R +
Sbjct: 4 VFVGNLPEDVRERELSDKFERYGRITSVRIKFPARPPPFAFLTYENEQDASDAVRSMNNT 63
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
F G R+RVE++ G P R ++YRV
Sbjct: 64 TFGGSRIRVEMSRGIDDARP--------------------------------RGTQYRVK 91
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
+ GLP + SWQDLKD +RK GDV ++V R G+ + P++M AIRKLD T+
Sbjct: 92 ISGLPDTMSWQDLKDFLRKGGDVVHSDVDRRGNGS---ASFATPDEMLRAIRKLDGTDL 147
>gi|221053983|ref|XP_002261739.1| pre-mRNA splicing factor [Plasmodium knowlesi strain H]
gi|193808199|emb|CAQ38902.1| pre-mRNA splicing factor, putative [Plasmodium knowlesi strain H]
Length = 495
Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 102/188 (54%), Gaps = 28/188 (14%)
Query: 4 RFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPC---YCFVEFENARDAED 60
R S IYVGNLP ++ E EV DLF KYGRI I++K P P + FV + ++RDAE
Sbjct: 10 RISSCIYVGNLPGNVVEDEVYDLFSKYGRIKYIDVKKPRAPGVPYSFAFVHYFDSRDAEY 69
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI RDGY +DG RLRVE + G R G Y G G
Sbjct: 70 AIDRRDGYKYDGVRLRVEYS--GENRS------YGKYRNKEEG-------------TGPP 108
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
+E+R+I+ LP S WQ LKD MR+ GDV +A V R GVV++ + +DM YAI
Sbjct: 109 VRTEHRIIISNLPESCKWQHLKDVMRQCGDVGYANVERGK----GVVEFISRDDMLYAIE 164
Query: 181 KLDDTEFR 188
K D +EF+
Sbjct: 165 KFDGSEFK 172
>gi|156082103|ref|XP_001608544.1| pre-mRNA splicing factor [Plasmodium vivax Sal-1]
gi|148801115|gb|EDL42520.1| pre-mRNA splicing factor, putative [Plasmodium vivax]
Length = 544
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 102/189 (53%), Gaps = 28/189 (14%)
Query: 3 GRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPC---YCFVEFENARDAE 59
R S IYVGNLP ++ E EV DLF K+GRI I++K P P + FV + ++RDAE
Sbjct: 9 NRISSCIYVGNLPGNVVEDEVYDLFAKFGRIKYIDVKKPRAPGVPYSFAFVHYFDSRDAE 68
Query: 60 DAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGI 119
AI RDGY +DG RLRVE SG S YG G G
Sbjct: 69 YAIDRRDGYKYDGVRLRVEY----SGENKS-------YGKYRKKEEGA----------GP 107
Query: 120 SRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAI 179
+E+R+I+ LP S WQ LKD MR+ GDV +A + R GVV++ + +DM YAI
Sbjct: 108 PVRTEHRIIISNLPESCKWQHLKDVMRQCGDVGYANIER----GRGVVEFISRDDMLYAI 163
Query: 180 RKLDDTEFR 188
K D +EF+
Sbjct: 164 EKFDGSEFK 172
>gi|399218146|emb|CCF75033.1| unnamed protein product [Babesia microti strain RI]
Length = 230
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/216 (38%), Positives = 119/216 (55%), Gaps = 28/216 (12%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKI--PPRPPCYCFVEFENARDAEDAIRGRD 66
I+VGNLP DI E+E++F K+G I DI++K Y F+EF + RDAEDA+ RD
Sbjct: 16 IFVGNLPEDITVREIENIFGKFGEIRDIDIKKGKTSNYTAYAFIEFYHMRDAEDAVESRD 75
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
GYNFD RLRVE + G R + D+ Y + +R +E+R
Sbjct: 76 GYNFDKYRLRVEFS--GRKRSGNQGDKLRRYND-----------------YSNTR-TEHR 115
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTE 186
+++ + SS WQD+KDHM++AG V + + G V+Y N DMKYA+ K D +E
Sbjct: 116 LVISNISSSCRWQDIKDHMKRAGPVGHVCI----KDGRGYVEYINKSDMKYALEKYDGSE 171
Query: 187 FRNPWARGRITVKRYD-RSPSRSRSRSRSRSRSRSR 221
++ RI V+ D RS S S RSR RS S+++
Sbjct: 172 LQSAGRSYRIKVRMDDHRSHSHSNERSR-RSASQNK 206
>gi|355778262|gb|EHH63298.1| Adapter-related protein complex 3 subunit beta-2 [Macaca
fascicularis]
Length = 1156
Score = 124 bits (311), Expect = 4e-26, Method: Composition-based stats.
Identities = 73/179 (40%), Positives = 90/179 (50%), Gaps = 52/179 (29%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYV LP+D+RE ++ED FYKY RI +IELK + FV FE+ RDAEDAI GR+GY
Sbjct: 8 IYVVGLPTDVREKDLEDFFYKYDRIHEIELKNWHGLVPFAFVHFEDPRDAEDAIYGRNGY 67
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ CRLRVE GRG
Sbjct: 68 DYGQCRLRVEFPRTYGGRG----------------------------------------- 86
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
SWQDLKDHMR DVC+A V +D G+V+Y DM+YA+RKLDD +F
Sbjct: 87 --------SWQDLKDHMRAVWDVCYAHVQKDG---VGMVEYLRKADMEYALRKLDDIKF 134
>gi|84998374|ref|XP_953908.1| splicing factor (SR protein) [Theileria annulata]
gi|65304906|emb|CAI73231.1| splicing factor (SR protein), putative [Theileria annulata]
Length = 341
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 100/194 (51%), Gaps = 20/194 (10%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKI--PPRPPCYCFVEFENARDAEDAIRGRD 66
++VGNLP + E ++ DLF K+G I D+++K Y F+EF + R AEDA+ RD
Sbjct: 15 VFVGNLPDRVDERDIHDLFDKFGEIKDVDIKHGKTSNYTSYAFIEFASVRSAEDAVDSRD 74
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
GY +D RLRVE A R S DR + R+ ++YR
Sbjct: 75 GYEYDRYRLRVEFAGEKKPRRYPSYDR--------------PRDRDRSNRYPPPTRTDYR 120
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTE 186
+++ LP WQ LKDHMRKAG V + + G VDY + DMKYAIRKLD +E
Sbjct: 121 LVISNLPHGCRWQHLKDHMRKAGPVGYVNIVHGK----GFVDYMHKSDMKYAIRKLDGSE 176
Query: 187 FRNPWARGRITVKR 200
P RI VK+
Sbjct: 177 LTTPDDSCRIRVKK 190
>gi|444720822|gb|ELW61591.1| Vascular endothelial zinc finger 1 [Tupaia chinensis]
Length = 399
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 88/185 (47%), Positives = 107/185 (57%), Gaps = 34/185 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE R G G G GG GG G SR SE RV+
Sbjct: 78 DYDGYRLRVEFP-------------RSGRGAGRGGGGGGGGGAPRGRYGPPSRRSENRVV 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V +GDVC+A+V RD GT GVV++ EDM YA+RKLD+T+FR
Sbjct: 125 V------------------SGDVCYADVYRD--GT-GVVEFVRKEDMTYAVRKLDNTKFR 163
Query: 189 NPWAR 193
+ A
Sbjct: 164 SHEAH 168
>gi|83273559|ref|XP_729451.1| splicing factor [Plasmodium yoelii yoelii 17XNL]
gi|23487306|gb|EAA21016.1| splicing factor, arginine/serine-rich 4 [Plasmodium yoelii yoelii]
Length = 516
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 84/209 (40%), Positives = 108/209 (51%), Gaps = 29/209 (13%)
Query: 2 SGRFSRT--IYVGNLPSDIREYEVEDLFYKYGRI--LDIELKIPPRPPCYCFVEFENARD 57
S R++RT IYVGNLP ++ E EV DLF K+GRI +DI+L Y FV + + +D
Sbjct: 5 SSRYNRTSCIYVGNLPGNVLEDEVYDLFGKFGRIKYIDIKLTRGSSSTAYAFVHYYDIKD 64
Query: 58 AEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRF 117
AE AI RDGY FDG RLRVE SG S R G
Sbjct: 65 AEYAIERRDGYKFDGERLRVEF----SGENKSFGKYRRKEDG-----------------I 103
Query: 118 GISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKY 177
G +E+R+IV LP + WQ LKD MR+ GDV +A + E G+V++ + + M Y
Sbjct: 104 GPPLRTEHRIIVSNLPDNCKWQHLKDIMRQCGDVGYANI----EHGKGIVEFVDRDGMLY 159
Query: 178 AIRKLDDTEFRNPWARGRITVKRYDRSPS 206
AI K D EF+ I V+R RS S
Sbjct: 160 AIEKFDRAEFKVHDQVTNIKVRRDKRSLS 188
>gi|82540657|ref|XP_724630.1| splicing factor 1 [Plasmodium yoelii yoelii 17XNL]
gi|23479337|gb|EAA16195.1| splicing factor, arginine/serine-rich 1 [Plasmodium yoelii yoelii]
Length = 309
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 106/193 (54%), Gaps = 21/193 (10%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLPS + +VE+ F K+G IL ++K + F+EFE+ARDA DAI+ +DG
Sbjct: 10 IYVGNLPSHVTSRDVENEFRKFGTILKCDVKKTVSGAAFAFIEFEDARDAADAIKEKDGC 69
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+F G +LRVE+ G +S RG G G SR Y V
Sbjct: 70 DFGGNKLRVEVPFNARDNGKYNSRGRGMMGRGSK-----------------SRRGRYVVE 112
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDH+R+AG+ A+V ++ G V + + EDM AI K + + FR
Sbjct: 113 VSGLPLSGSWQDLKDHLREAGECGHADVFKNGTGE---VSFFHKEDMLEAIEKFNGSTFR 169
Query: 189 -NPWARGRITVKR 200
+ + +IT+++
Sbjct: 170 SHEGEKAKITIRQ 182
>gi|348683415|gb|EGZ23230.1| hypothetical protein PHYSODRAFT_556082 [Phytophthora sojae]
Length = 222
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 96/179 (53%), Gaps = 34/179 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VGNLP D+RE ++ D F ++GRI + +K P RPP + F+ ++N DA DA+R G
Sbjct: 4 VFVGNLPEDVRERDLSDKFERFGRISSVRIKFPTRPPPFAFIAYDNEEDASDAVRSMHGA 63
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
GCRLRVE++ G D R R ++YRV
Sbjct: 64 MLSGCRLRVEMSRG------LVDDAR-------------------------PRGTQYRVK 92
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
+ GLP++ SWQDLKD +RK GDV ++V R GT + ++M+ AIR+LD T+
Sbjct: 93 ISGLPATMSWQDLKDFLRKGGDVVHSDVDRRGNGTAS---FATSDEMRRAIRQLDGTDL 148
>gi|325186279|emb|CCA20785.1| splicing factor putative [Albugo laibachii Nc14]
Length = 275
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 100/179 (55%), Gaps = 27/179 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
I+VGNLP +I E E+E F ++G+I+++ LK P RPP + F+E+E+ RDAEDA++ G
Sbjct: 27 IFVGNLPQEISEPELEKTFGEFGKIVNVILKFPRRPPPFAFIEYEDLRDAEDAVQQMHGK 86
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G +RVE+ S GP +S R +GG G +++RV
Sbjct: 87 ELHGAEIRVEI----SRNGPKAS-RDEKFGGRHHG-------------------TQFRVE 122
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
+ +P S SWQDLKD +R G V A+V R GV +TN ++M+ AIRKL D +
Sbjct: 123 LSNIPRSVSWQDLKDFLRIGGVVVHADVDRRGN---GVASFTNQQEMERAIRKLKDAKL 178
>gi|325189186|emb|CCA23709.1| splicing factor putative [Albugo laibachii Nc14]
Length = 233
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 100/179 (55%), Gaps = 27/179 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
I+VGNLP +I E E+E F ++G+I+++ LK P RPP + F+E+E+ RDAEDA++ G
Sbjct: 27 IFVGNLPQEISEPELEKTFGEFGKIVNVILKFPRRPPPFAFIEYEDLRDAEDAVQQMHGK 86
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G +RVE+ S GP +S R +GG G +++RV
Sbjct: 87 ELHGAEIRVEI----SRNGPKAS-RDEKFGGRHHG-------------------TQFRVE 122
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
+ +P S SWQDLKD +R G V A+V R GV +TN ++M+ AIRKL D +
Sbjct: 123 LSNIPRSVSWQDLKDFLRIGGVVVHADVDRRGN---GVASFTNQQEMERAIRKLKDAKL 178
>gi|124802534|ref|XP_001347501.1| pre-mRNA splicing factor, putative [Plasmodium falciparum 3D7]
gi|23495082|gb|AAN35414.1|AE014832_36 pre-mRNA splicing factor, putative [Plasmodium falciparum 3D7]
Length = 538
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 100/189 (52%), Gaps = 29/189 (15%)
Query: 4 RFSRT---IYVGNLPSDIREYEVEDLFYKYGRILDIELK-IPPRPPCYCFVEFENARDAE 59
RFS++ IYVGNLP ++ E EV DLF KYGRI I++K Y FV + + +DA+
Sbjct: 6 RFSKSSSCIYVGNLPGNVIEEEVYDLFGKYGRIKYIDIKPSRSSSSSYAFVHYYDLKDAD 65
Query: 60 DAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGI 119
AI RDGY FDG RLRVE H G R G Y G G
Sbjct: 66 YAIERRDGYKFDGFRLRVE--HSGENRSF------GKYRKKDDG-------------VGP 104
Query: 120 SRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAI 179
+E RVIV LP + WQ LKD MR+ GDV +A + R G+V++ + +DM YAI
Sbjct: 105 PIRTENRVIVTNLPDNCRWQHLKDIMRQCGDVGYANIERGK----GIVEFVSYDDMLYAI 160
Query: 180 RKLDDTEFR 188
K D EF+
Sbjct: 161 EKFDGAEFK 169
>gi|71033489|ref|XP_766386.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353343|gb|EAN34103.1| hypothetical protein TP01_0865 [Theileria parva]
Length = 343
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 101/194 (52%), Gaps = 20/194 (10%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKI--PPRPPCYCFVEFENARDAEDAIRGRD 66
++VGNLP + E +++DLF K+G I DI++K Y F+EF + R AEDA+ RD
Sbjct: 15 VFVGNLPDRVDERDIQDLFDKFGEIKDIDIKHGKTSNYTSYAFIEFASVRSAEDAVDSRD 74
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
GY +D RLRVE A R S +R + R+ ++YR
Sbjct: 75 GYEYDRYRLRVEFAGEKRPRRYPSYER--------------PRDRDRSNRYPPPTRTDYR 120
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTE 186
+++ LP WQ LKDHMRKAG V + + G VD+ + DMKYAIRKLD +E
Sbjct: 121 LVISNLPHGCRWQHLKDHMRKAGPVGYVNIVHGK----GFVDFLHKSDMKYAIRKLDGSE 176
Query: 187 FRNPWARGRITVKR 200
P RI VK+
Sbjct: 177 LSTPDDSCRIRVKK 190
>gi|70945413|ref|XP_742529.1| pre-mRNA splicing factor [Plasmodium chabaudi chabaudi]
gi|56521563|emb|CAH75989.1| pre-mRNA splicing factor, putative [Plasmodium chabaudi chabaudi]
Length = 373
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/200 (40%), Positives = 102/200 (51%), Gaps = 27/200 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRI--LDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
IYVGNLP ++ E EV DLF KYGRI +DI+L Y FV + + +DAE AI RD
Sbjct: 13 IYVGNLPGNVLEDEVYDLFGKYGRIKYIDIKLTRGSSSTAYAFVHYYDIKDAEYAIERRD 72
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
GY FDG RLRVE SG S R G G +E+R
Sbjct: 73 GYKFDGERLRVEF----SGENKSFGKYRRKEDG-----------------IGPPLRTEHR 111
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTE 186
+IV LP + WQ LKD MR+ GDV +A + E G+V++ + + M YAI K D E
Sbjct: 112 IIVSNLPDNCKWQHLKDIMRQCGDVGYANI----EHGKGIVEFVDRDGMLYAIEKFDRAE 167
Query: 187 FRNPWARGRITVKRYDRSPS 206
F+ I V+R RS S
Sbjct: 168 FKVHDQVTNIKVRRDKRSLS 187
>gi|84996527|ref|XP_952985.1| splicing factor [Theileria annulata strain Ankara]
gi|65303981|emb|CAI76360.1| splicing factor, putative [Theileria annulata]
Length = 269
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 105/193 (54%), Gaps = 30/193 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IY+GNLP D + E+E+ F K+GRI+ +LK + F+EF ++RDA DAIR +DGY
Sbjct: 9 IYIGNLPEDCSQRELEEEFEKFGRIIYCDLKKSYSGSPFAFIEFSDSRDARDAIRDKDGY 68
Query: 69 NFDGCRLRVELA--HGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
F G +LRVEL + R PSS R+G +R +Y
Sbjct: 69 EFHGKKLRVELPFRYRDEPRRPSSR------------------------RYGTTRRGKYV 104
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTE 186
+ V GLP + SWQDLKDHMR AG+ A+V R G G + + + DM YAI + D +
Sbjct: 105 LEVTGLPPTGSWQDLKDHMRDAGECGHADVFR---GGVGEITFFSRSDMDYAIERFDGST 161
Query: 187 FR-NPWARGRITV 198
FR + + RI+V
Sbjct: 162 FRSHEGEKSRISV 174
>gi|413948773|gb|AFW81422.1| hypothetical protein ZEAMMB73_489346 [Zea mays]
Length = 446
Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/132 (48%), Positives = 76/132 (57%), Gaps = 17/132 (12%)
Query: 28 YKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRG 87
Y+YGRILDI+LKIPPRPP Y VEFE+ DA+DAI GRD YNFDG RL + +A
Sbjct: 269 YQYGRILDIDLKIPPRPPRYAVVEFEDPHDADDAIYGRDEYNFDGYRLLLIVAEASLILM 328
Query: 88 PSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRK 147
A A + V+V GLPSS SWQDLKDHMR+
Sbjct: 329 IVQ-----------------AAISVHAVEVFLGALISMVVMVTGLPSSVSWQDLKDHMRR 371
Query: 148 AGDVCFAEVSRD 159
AGDVCF++V R+
Sbjct: 372 AGDVCFSDVYRE 383
>gi|325302612|tpg|DAA34674.1| TPA_inf: alternative splicing factor SRp55/B52/SRp75 [Amblyomma
variegatum]
Length = 281
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 103/179 (57%), Gaps = 7/179 (3%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G+L +RE +V+ F YGR+ DI LK + FVEFE+ RDA+DAI+ +G
Sbjct: 5 VFIGHLSYQVRERDVDRFFKGYGRVGDIHLK-----NGFGFVEFEDHRDADDAIKDLNGK 59
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VELAHG S RGP G + GG RFG + Y+++
Sbjct: 60 ELLGERVSVELAHG-SRRGPGGRIVAPGSRDWRSPPGGGRFNAPRESRFGPPVRTNYQLV 118
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V F + + + G+V+++N DM+ A+ KLD+T+
Sbjct: 119 VENLSSHVSWQDLKDYMRQAGEVTFTD-AHSNRPNQGIVEFSNYADMRNALNKLDNTDL 176
>gi|351700803|gb|EHB03722.1| Splicing factor, arginine/serine-rich 9 [Heterocephalus glaber]
Length = 266
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/219 (42%), Positives = 118/219 (53%), Gaps = 43/219 (19%)
Query: 8 TIYVGNLPSDIREYEVEDLFYKYGRILDIELK-----IPPRPPCYCFVEFENARDAEDAI 62
IYV NL K GRI +IELK +P + FV F++ RDAEDAI
Sbjct: 65 CIYVANLRQTCSRRTC-----KCGRICEIELKNRHGLVP-----FAFVRFKDPRDAEDAI 114
Query: 63 RGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRH 122
GR+GY++ CRLRVE P + RGG GG GA G
Sbjct: 115 CGRNGYDYGQCRLRVEF--------PRTYGGRGGCPRGGRTGAPARG------------- 153
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKL 182
S++RV+V GLP S SWQDLKDH+ +AGDVC+A+V +D G+V++ EDM YA+RKL
Sbjct: 154 SDFRVLVSGLPPSGSWQDLKDHIPEAGDVCYADVQKDG---MGMVEHLRKEDMDYALRKL 210
Query: 183 DDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRSR 221
DDT+FR+ G + R P R+ S S SRS SR
Sbjct: 211 DDTKFRS--HEGETSYIRV--YPERNTSYCYSWSRSGSR 245
>gi|346468507|gb|AEO34098.1| hypothetical protein [Amblyomma maculatum]
Length = 280
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 104/187 (55%), Gaps = 25/187 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G+L +RE +V+ F YGR+ DI LK + FVEFE+ RDA+DAI+ +G
Sbjct: 5 VFIGHLSYQVRERDVDRFFKGYGRVGDIHLKN-----GFGFVEFEDHRDADDAIKDLNGK 59
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHS----- 123
G R+ VELAHG S RGP GG G + GRF R S
Sbjct: 60 ELLGERVSVELAHG-SRRGP----------GGRIVAPGSRDWRSPPGRFNAPRESRFGPP 108
Query: 124 ---EYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
Y++IV L S SWQDLKD+MR+AG+V F + + + G+V+++N DM+ A+
Sbjct: 109 VRTNYQLIVENLSSHVSWQDLKDYMRQAGEVTFTD-AHSNRPNQGIVEFSNYADMRNALN 167
Query: 181 KLDDTEF 187
KLD+T+
Sbjct: 168 KLDNTDL 174
>gi|344295340|ref|XP_003419370.1| PREDICTED: serine/arginine-rich splicing factor 9-like, partial
[Loxodonta africana]
Length = 174
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/143 (47%), Positives = 86/143 (60%), Gaps = 24/143 (16%)
Query: 47 YCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAG 106
+ FV FE RDAEDAI GR+GY++ CRLRVE GR
Sbjct: 7 FAFVRFETPRDAEDAIYGRNGYDYGQCRLRVEFPRAYGGR-------------------- 46
Query: 107 GAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGV 166
G G +R S++RV+V GLP S SWQDLKDHMR+AGDVC+A+V +D G+
Sbjct: 47 -GGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGM---GM 102
Query: 167 VDYTNPEDMKYAIRKLDDTEFRN 189
V+Y EDM+YA+RKLDDT+FR+
Sbjct: 103 VEYLRKEDMEYALRKLDDTKFRS 125
>gi|300121283|emb|CBK21663.2| unnamed protein product [Blastocystis hominis]
Length = 381
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 102/178 (57%), Gaps = 29/178 (16%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++V NLP D+RE E++D F +YG ++D+ LK+ P Y FVEFE AE+A++G++G
Sbjct: 5 VFVANLPKDVRESELKDEFSRYGTVIDVTLKLTGHTP-YGFVEFEEESAAEEAVKGKNGS 63
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G LRVE+A+G RGP G ++G H+ YRV
Sbjct: 64 VLGGLSLRVEVANG---RGP---------------------KGDRGSKYGPPVHTNYRVE 99
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTE 186
V LP SWQDLKDHMRK GDV + V +G G+V+YTN +DM AI+ LDD++
Sbjct: 100 VTHLPYHCSWQDLKDHMRKEGDVGYCSV----DGGVGIVEYTNYDDMMRAIKYLDDSK 153
>gi|427777415|gb|JAA54159.1| Putative alternative splicing factor [Rhipicephalus pulchellus]
Length = 484
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 100/179 (55%), Gaps = 21/179 (11%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG+L +RE ++E F +G+I ++ LK + FVEF++ RDA+DA+ +G
Sbjct: 4 VYVGHLSYRVRERDLERFFRGFGKIREVLLK-----NGFGFVEFDDYRDADDAVYELNGR 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
DG R+ VELAHG + R P A A +G R+G ++YRVI
Sbjct: 59 ELDGERVVVELAHGTARRPPPPR---------------SAWADSGTNRYGPPTRTDYRVI 103
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
+ L S SWQDLKD MR+ GDV +A+ R GVV++ + DMK AI KLD+TE
Sbjct: 104 IENLSSRISWQDLKDRMRQVGDVTYADAHRHRRNE-GVVEFASYSDMKRAIEKLDNTEI 161
>gi|148224986|ref|NP_001080148.1| splicing factor, arginine/serine-rich 6 [Xenopus laevis]
gi|28422195|gb|AAH44265.1| B52-prov protein [Xenopus laevis]
Length = 660
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 105/183 (57%), Gaps = 17/183 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L +RE +++ F YG++L+++LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYVGRLGYHVREKDIQRFFGSYGKLLEVDLKN-----GYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAG----AGAGAGRFGISRHSE 124
+ G R+ VE A RGP R GYG G G G +G ++G +E
Sbjct: 59 DLCGERVIVEHA-----RGPRRD--RDGYGYGSRSKHGSPGGYRNQRSGRDKYGPPVRTE 111
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDD 184
+R++V L S SWQDLKD MR+AG+V +A+ ++ GV+++ + D+K A+ KLD
Sbjct: 112 FRLVVENLSSRCSWQDLKDFMRQAGEVTYADAHKE-RPNEGVIEFRSYSDLKRAVEKLDG 170
Query: 185 TEF 187
TE
Sbjct: 171 TEI 173
>gi|443724659|gb|ELU12563.1| hypothetical protein CAPTEDRAFT_175470 [Capitella teleta]
Length = 321
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 112/299 (37%), Positives = 148/299 (49%), Gaps = 57/299 (19%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGR IYVG L +RE ++E F YGRI+D+ LK Y FVEF++ RDA+D
Sbjct: 1 MSGR----IYVGRLSYSVRERDIERFFRNYGRIVDVLLK-----NGYGFVEFDDYRDADD 51
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAG----- 115
A+ +G G R+ +E A RGP+ D R G GG G G G
Sbjct: 52 AVYELNGKELCGERVVIEHA-----RGPNRKDDRDGGYRDRGDRGGGRGGGRQPGWMDKS 106
Query: 116 --RFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPE 173
R+G +EYR++V L S SWQDLKD+MR+AG+V +A+ + + G+V++++
Sbjct: 107 GSRYGPPARTEYRLVVENLSSRVSWQDLKDYMRQAGEVTYADAHKQHKNE-GIVEFSSRA 165
Query: 174 DMKYAIRKLDDTEFRNPWAR--------------------------------GRITVKRY 201
DMK A+ KLDDTE R R
Sbjct: 166 DMKTALEKLDDTEINGRRIRLVEDRSRSRRRSHSRSHSRGRYRSRSPRSRSRSRRRSVSR 225
Query: 202 DRSPSRSRSRSRSRSRSRSRIVRRNRSKSLERSVSRSVSRSMSASPVKSSRARSRSRSV 260
RSP +SRS SR RS V R RSKS++RSVSR S+S S V R++SR RSV
Sbjct: 226 SRSPVHRNGKSRSLSRDRS--VSRGRSKSMDRSVSRDRSKSRDRS-VSRDRSKSRDRSV 281
>gi|354497469|ref|XP_003510842.1| PREDICTED: serine/arginine-rich splicing factor 9-like, partial
[Cricetulus griseus]
Length = 201
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/133 (48%), Positives = 82/133 (61%), Gaps = 24/133 (18%)
Query: 57 DAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGR 116
DAEDAI GR+GY++ CRLRVE GR AG GA
Sbjct: 44 DAEDAIYGRNGYDYGQCRLRVEFPRTYGGR---------------------AGWPRGARN 82
Query: 117 FGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMK 176
+R S++RV+V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y EDM+
Sbjct: 83 GPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDME 139
Query: 177 YAIRKLDDTEFRN 189
YA+RKLDDT+FR+
Sbjct: 140 YALRKLDDTKFRS 152
>gi|296004548|ref|XP_001351730.2| splicing factor, putative [Plasmodium falciparum 3D7]
gi|225631680|emb|CAD51537.2| splicing factor, putative [Plasmodium falciparum 3D7]
Length = 298
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 101/180 (56%), Gaps = 18/180 (10%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLPS + +VE+ F KYG IL ++K + F+EFE+ARDA DAI+ +DG
Sbjct: 10 IYVGNLPSHVSSRDVENEFRKYGNILKCDVKKTVSGAAFAFIEFEDARDAADAIKEKDGC 69
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+F+G +LRVE+ P ++ G Y G G SR Y V
Sbjct: 70 DFEGNKLRVEV--------PFNARENGRYNARGGGRGMMHRGPK-------SRRGRYVVE 114
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDH+R+AG+ A+V +D GT G V + N +DM AI K + + FR
Sbjct: 115 VTGLPISGSWQDLKDHLREAGECGHADVFKD--GT-GEVSFFNKDDMLEAIDKFNGSIFR 171
>gi|165377173|ref|NP_065612.2| serine/arginine-rich splicing factor 4 [Mus musculus]
gi|26449170|dbj|BAC36925.1| unnamed protein product [Mus musculus]
gi|74152317|dbj|BAE33925.1| unnamed protein product [Mus musculus]
gi|148698178|gb|EDL30125.1| splicing factor, arginine/serine-rich 4 (SRp75) [Mus musculus]
Length = 491
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 104/179 (58%), Gaps = 17/179 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLKN-----GYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP RR G G G G G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGP----RRDGSYGSGRSGYGYRRSGRD--KYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ + + GV+++ + DMK A+ KLD TE
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNE-GVIEFVSYSDMKRALEKLDGTEV 165
>gi|296213104|ref|XP_002753142.1| PREDICTED: serine/arginine-rich splicing factor 9, partial
[Callithrix jacchus]
Length = 167
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/141 (47%), Positives = 85/141 (60%), Gaps = 24/141 (17%)
Query: 49 FVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGA 108
FV FE+ RDAEDAI GR+GY++ CRLRVE G
Sbjct: 2 FVRFEDPRDAEDAIYGRNGYDYGQCRLRVEFPRTY---------------------GGRG 40
Query: 109 GAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVD 168
G G +R S++RV+V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+
Sbjct: 41 GWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDG---VGMVE 97
Query: 169 YTNPEDMKYAIRKLDDTEFRN 189
Y EDM+YA+RKLDDT+FR+
Sbjct: 98 YLRKEDMEYALRKLDDTKFRS 118
>gi|156095500|ref|XP_001613785.1| splicing factor, arginine/serine-rich 1 [Plasmodium vivax Sal-1]
gi|148802659|gb|EDL44058.1| splicing factor, arginine/serine-rich 1, putative [Plasmodium
vivax]
Length = 314
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 107/200 (53%), Gaps = 20/200 (10%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLPS + +VE+ F KYG IL ++K + F+EFE+ARDA DAI+ +DG
Sbjct: 10 IYVGNLPSHVTPRDVENEFRKYGTILKCDVKKTVSGAAFAFIEFEDARDAADAIKEKDGC 69
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+F G +LRVE+ G SS G GR SR Y V
Sbjct: 70 DFGGNKLRVEVPFNARDNGKYSS----------------RGGRGMMGRGMKSRRGRYVVE 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDH+R+AG+ A+V ++ G V + + EDM AI K + + FR
Sbjct: 114 VSGLPLSGSWQDLKDHLREAGECGHADVFKNG---LGEVSFFHKEDMLEAIEKFNGSTFR 170
Query: 189 -NPWARGRITVKRYDRSPSR 207
+ + +IT+++ S R
Sbjct: 171 SHEGEKSKITIRQKKTSWHR 190
>gi|47575808|ref|NP_001001248.1| arginine/serine-rich splicing factor 4 isoform 1 [Xenopus
(Silurana) tropicalis]
gi|45872604|gb|AAH68213.1| splicing factor, arginine/serine-rich 6 [Xenopus (Silurana)
tropicalis]
Length = 568
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 105/179 (58%), Gaps = 15/179 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L +RE +++ F YG++L+++LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLGYHVREKDIQRFFGGYGKLLEVDLKN-----GYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP R GYG G +G +G ++G +E+R+I
Sbjct: 59 DLCGERVIVEHA-----RGPRRD--RDGYGYGSR--SGYRNQRSGRDKYGPPVRTEFRLI 109
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MR+AG+V +A+ ++ GV+++ + DMK A+ KLD TE
Sbjct: 110 VENLSSRCSWQDLKDFMRQAGEVTYADAHKE-RANEGVIEFRSYSDMKRAMEKLDGTEI 167
>gi|1403024|emb|CAA90876.1| hnRNP protein [Chironomus tentans]
Length = 322
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 99/179 (55%), Gaps = 7/179 (3%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGTRERDLEKFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A G + RG S DR G + R+G +EYR+I
Sbjct: 61 ELLGERVVVEPARG-TARGGSHRDRYDDRYGRRGRYDRYNNSSRSNSRYGPPLRTEYRLI 119
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ + + GVV++ +DMK AI KLDDTE
Sbjct: 120 VENLSSRVSWQDLKDYMRQAGEVTYADAHKQNRNE-GVVEFATLKDMKTAIEKLDDTEL 177
>gi|147904116|ref|NP_001079647.1| serine/arginine-rich splicing factor 6 [Xenopus laevis]
gi|28436899|gb|AAH46668.1| MGC52985 protein [Xenopus laevis]
Length = 667
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 104/179 (58%), Gaps = 15/179 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L +RE +++ F YG++L+I+LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLGYHVREKDLQRFFGGYGKLLEIDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ +E A RGP R GYG G +G G ++G +E+R++
Sbjct: 59 DLCGERVIIEHA-----RGPRRD--RDGYGYGSR--SGYRNQRTGRDKYGPPVRTEFRLV 109
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MR+AG+V +A+ ++ GV+++ + DMK A+ KLD TE
Sbjct: 110 VENLSSRCSWQDLKDFMRQAGEVTYADAHKE-RANEGVIEFRSYSDMKRAVEKLDGTEI 167
>gi|198436398|ref|XP_002124933.1| PREDICTED: similar to splicing factor, arginine/serine-rich 1,
partial [Ciona intestinalis]
Length = 166
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 66/133 (49%), Positives = 85/133 (63%), Gaps = 23/133 (17%)
Query: 57 DAEDAIRGRDGYNFDGCRLRVELAHGGSG-RGPSSSDRRGGYGGGGAGGAGGAGAGAGAG 115
DA+DA+R R+GYNFDG +L+VE SG +G S+ RG G
Sbjct: 1 DADDAVRARNGYNFDGYKLKVERPRSSSGFQGRPSNYIRGRPGPP--------------- 45
Query: 116 RFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDM 175
S+ +EYRVIV GLP S SWQDLKDHMR+AGDVC+A+V RD GVV++ N EDM
Sbjct: 46 ----SKRTEYRVIVEGLPGSGSWQDLKDHMREAGDVCYADVYRDGS---GVVEFVNKEDM 98
Query: 176 KYAIRKLDDTEFR 188
K+A++ +DDT+FR
Sbjct: 99 KFALKHMDDTKFR 111
>gi|449480417|ref|XP_002196866.2| PREDICTED: serine/arginine-rich splicing factor 1 [Taeniopygia
guttata]
Length = 210
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/136 (55%), Positives = 87/136 (63%), Gaps = 16/136 (11%)
Query: 54 NARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAG 113
RDAEDA+ GRDGY++DG RLRVE G G G GG GG G
Sbjct: 20 QPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRG-------------TGRGGGGGGGGGAPR 66
Query: 114 AGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPE 173
SR SEYRVIV GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ E
Sbjct: 67 GRYGPPSRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRD--GT-GVVEFVRKE 123
Query: 174 DMKYAIRKLDDTEFRN 189
DM YA+RKLD+T+FR+
Sbjct: 124 DMTYAVRKLDNTKFRS 139
>gi|389584162|dbj|GAB66895.1| splicing factor arginine/serine-rich 1 [Plasmodium cynomolgi strain
B]
Length = 316
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 108/192 (56%), Gaps = 20/192 (10%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLPS + +VE+ F KYG IL ++K + F+EFE+ARDA DAI+ +DG
Sbjct: 10 IYVGNLPSHVTPRDVENEFRKYGTILKCDVKKTVSGAAFAFIEFEDARDAADAIKEKDGC 69
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+F G +LRVE+ P ++ G Y G G G G + GR Y V
Sbjct: 70 DFGGNKLRVEV--------PFNARDNGKYNSRGGRGMMGRGMKSRRGR--------YVVE 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDH+R+AG+ A+V ++ G V + + EDM AI K + + FR
Sbjct: 114 VSGLPLSGSWQDLKDHLREAGECGHADVFKNG---LGEVSFFHKEDMLEAIEKFNGSTFR 170
Query: 189 -NPWARGRITVK 199
+ + +IT++
Sbjct: 171 SHEGEKSKITIR 182
>gi|20978758|sp|Q8VE97.1|SRSF4_MOUSE RecName: Full=Serine/arginine-rich splicing factor 4; AltName:
Full=Splicing factor, arginine/serine-rich 4
gi|18043896|gb|AAH19437.1| Sfrs4 protein [Mus musculus]
Length = 489
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 104/179 (58%), Gaps = 17/179 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLKN-----GYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP RR G G G G G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGP----RRDGSYGSGRSGYGYRRSGRD--KYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ + + GV+++ + DMK A+ KLD TE
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNE-GVIEFVSYSDMKRALEKLDGTEV 165
>gi|157822515|ref|NP_001102155.1| splicing factor, arginine/serine-rich 4 [Rattus norvegicus]
gi|149024115|gb|EDL80612.1| similar to Sfrs4 protein (predicted) [Rattus norvegicus]
Length = 488
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 104/179 (58%), Gaps = 17/179 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLKN-----GYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP RR G G G G G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGP----RRDGSYGSGRSGYGYRRSGRD--KYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ + + GV+++ + DMK A+ KLD TE
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNE-GVIEFVSYSDMKRALEKLDGTEV 165
>gi|348571040|ref|XP_003471304.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Cavia
porcellus]
Length = 497
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 104/179 (58%), Gaps = 17/179 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLKN-----GYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP RR G G G G G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGP----RRDGSYGSGRSGYGYRRSGRD--KYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ + + GV+++ + DMK A+ KLD TE
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNE-GVIEFVSYSDMKRALEKLDGTEV 165
>gi|126328783|ref|XP_001365267.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Monodelphis
domestica]
Length = 491
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 104/179 (58%), Gaps = 17/179 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP RR G G G G G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGP----RRDGSYGSGRSGYGYRRSGRD--KYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ + + GV+++ + DMK A+ KLD TE
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNE-GVIEFVSYSDMKRALEKLDGTEV 165
>gi|241574285|ref|XP_002403076.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
gi|215502149|gb|EEC11643.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
Length = 268
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 100/179 (55%), Gaps = 9/179 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G+L +RE +++ F YGR+ DI LK + FVEF++ RDA+DAI +G
Sbjct: 5 VFIGHLSCQVREKDLDKFFKGYGRVGDIHLK-----NGFGFVEFDDHRDADDAISDLNGK 59
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VELA+G S RGP R RFG + +EY++I
Sbjct: 60 ELLGERVSVELAYG-SRRGPGG--RIVPPRPDWRSPPPRRPFAPRDTRFGPPQRTEYQLI 116
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ + GVV++ N DMK AI KLD+T+
Sbjct: 117 VENLSSHVSWQDLKDYMRQAGEVTYADAHK-IRPNEGVVEFANYSDMKNAISKLDNTDL 174
>gi|155372181|ref|NP_001094701.1| serine/arginine-rich splicing factor 4 [Bos taurus]
gi|154425888|gb|AAI51319.1| SFRS4 protein [Bos taurus]
gi|296490028|tpg|DAA32141.1| TPA: splicing factor, arginine/serine-rich 4 [Bos taurus]
Length = 493
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 104/179 (58%), Gaps = 17/179 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP RR G G G G G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGP----RRDGSYGSGRSGYGYRRSGRD--KYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ + + GV+++ + DMK A+ KLD TE
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNE-GVIEFVSYSDMKRALEKLDGTEV 165
>gi|326932930|ref|XP_003212564.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Meleagris
gallopavo]
Length = 475
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 103/179 (57%), Gaps = 17/179 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP RR G G G G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGP----RRDSSYGSGRSGYGYRRSGRD--KYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ + + GV+++ + DMK A+ KLD TE
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNE-GVIEFKSYSDMKRALEKLDGTEV 165
>gi|347972223|ref|XP_315232.3| AGAP004592-PA [Anopheles gambiae str. PEST]
gi|347972225|ref|XP_003436861.1| AGAP004592-PH [Anopheles gambiae str. PEST]
gi|333469344|gb|EAA10559.4| AGAP004592-PA [Anopheles gambiae str. PEST]
gi|333469351|gb|EGK97262.1| AGAP004592-PH [Anopheles gambiae str. PEST]
Length = 345
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 99/179 (55%), Gaps = 11/179 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A G+ RGPS R G + R+G +EYR++
Sbjct: 61 ELLGERVVVEPAR-GTARGPSGYRER----DRYDRDRRGGRYDKNSSRYGPPLRTEYRLV 115
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L + SWQDLKD+MR+AG+V +A+ + + GVV++ DMK AI KLDDTE
Sbjct: 116 VENLSTRVSWQDLKDYMRQAGEVTYADAHKQRKNE-GVVEFATLSDMKTAIEKLDDTEL 173
>gi|301788378|ref|XP_002929604.1| PREDICTED: hypothetical protein LOC100475275 [Ailuropoda
melanoleuca]
Length = 498
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 104/179 (58%), Gaps = 17/179 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP RR G G G G G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGP----RRDGSYGSGRSGYGYRRSGRD--KYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ + + GV+++ + DMK A+ KLD TE
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNE-GVIEFVSYSDMKRALEKLDGTEV 165
>gi|395730870|ref|XP_003775801.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 4 [Pongo abelii]
Length = 492
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 104/179 (58%), Gaps = 17/179 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP RR G G G G G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGP----RRDGSYGSGRSGYGYRRSGRD--KYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ + + GV+++ + DMK A+ KLD TE
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNE-GVIEFVSYSDMKRALEKLDGTEV 165
>gi|395856813|ref|XP_003800813.1| PREDICTED: serine/arginine-rich splicing factor 4 [Otolemur
garnettii]
Length = 503
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 105/179 (58%), Gaps = 17/179 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP R G YG +G +G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGPR---RDGSYG---SGRSGYGYRRSGRDKYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ + + GV+++ + DMK A+ KLD TE
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNE-GVIEFVSYSDMKRALEKLDGTEV 165
>gi|281340422|gb|EFB16006.1| hypothetical protein PANDA_019831 [Ailuropoda melanoleuca]
Length = 488
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 104/179 (58%), Gaps = 17/179 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP RR G G G G G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGP----RRDGSYGSGRSGYGYRRSGRD--KYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ + + GV+++ + DMK A+ KLD TE
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNE-GVIEFVSYSDMKRALEKLDGTEV 165
>gi|8497|emb|CAA41556.1| SRp55 [Drosophila melanogaster]
Length = 350
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/179 (45%), Positives = 105/179 (58%), Gaps = 8/179 (4%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A G S RG S+ DR GG GG GG + R+G +EYR+I
Sbjct: 61 ELLGERVVVEPARG-SARG-SNRDRYDDRYGGRRGGGGGRYNEKSSSRYGPPLRTEYRLI 118
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ + GVV++ + DMK AI KLDDTE
Sbjct: 119 VENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNE-GVVEFASLSDMKTAIEKLDDTEL 176
>gi|332245240|ref|XP_003271770.1| PREDICTED: uncharacterized protein LOC100597914 isoform 1 [Nomascus
leucogenys]
Length = 494
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 105/179 (58%), Gaps = 17/179 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP R G YG +G +G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGPR---RDGSYG---SGRSGYGYRRSGRDKYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ + + GV+++ + DMK A+ KLD TE
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNE-GVIEFVSYSDMKRALEKLDGTEV 165
>gi|402853658|ref|XP_003891508.1| PREDICTED: serine/arginine-rich splicing factor 4 [Papio anubis]
Length = 494
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 104/179 (58%), Gaps = 17/179 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP RR G G G G G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGP----RRDGSYGSGRSGYGYRRSGRD--KYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ + + GV+++ + DMK A+ KLD TE
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNE-GVIEFVSYSDMKRALEKLDGTEV 165
>gi|410966619|ref|XP_003989828.1| PREDICTED: serine/arginine-rich splicing factor 4 [Felis catus]
Length = 499
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 104/179 (58%), Gaps = 17/179 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP RR G G G G G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGP----RRDGSYGSGRSGYGYRRSGRD--KYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ + + GV+++ + DMK A+ KLD TE
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNE-GVIEFVSYSDMKRALEKLDGTEV 165
>gi|71028610|ref|XP_763948.1| splicing factor [Theileria parva strain Muguga]
gi|68350902|gb|EAN31665.1| splicing factor, putative [Theileria parva]
Length = 257
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 102/193 (52%), Gaps = 30/193 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IY+GNLP D + E+E+ F K+GRI+ ELK + F+EF ++RDA DAIR +DGY
Sbjct: 9 IYIGNLPEDCSQRELEEEFEKFGRIIYCELKKSYSGSPFAFIEFSDSRDARDAIRDKDGY 68
Query: 69 NFDGCRLRVELA--HGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
F G +LRVEL + R PS R +R +Y
Sbjct: 69 EFHGKKLRVELPFRYKDEPRRPSGRRYRT------------------------TRRGKYV 104
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTE 186
+ V GLP S SWQDLKDHMR AG+ A+V R G G + + + DM YAI + D +
Sbjct: 105 LEVTGLPPSGSWQDLKDHMRDAGECGHADVFR---GGVGEITFFSRSDMDYAIERFDGST 161
Query: 187 FR-NPWARGRITV 198
FR + + RI+V
Sbjct: 162 FRSHEGEKSRISV 174
>gi|384939756|gb|AFI33483.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
Length = 494
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 105/179 (58%), Gaps = 17/179 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP R G YG +G +G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGPR---RDGSYG---SGRSGYGYRRSGRDKYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ + + GV+++ + DMK A+ KLD TE
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNE-GVIEFVSYSDMKRALEKLDGTEV 165
>gi|386780975|ref|NP_001247807.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
gi|355745074|gb|EHH49699.1| hypothetical protein EGM_00406 [Macaca fascicularis]
gi|380787433|gb|AFE65592.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
gi|383408863|gb|AFH27645.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
Length = 494
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 104/179 (58%), Gaps = 17/179 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP RR G G G G G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGP----RRDGSYGSGRSGYGYRRSGRD--KYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ + + GV+++ + DMK A+ KLD TE
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNE-GVIEFVSYSDMKRALEKLDGTEV 165
>gi|119628063|gb|EAX07658.1| splicing factor, arginine/serine-rich 4, isoform CRA_b [Homo
sapiens]
gi|158256450|dbj|BAF84198.1| unnamed protein product [Homo sapiens]
Length = 494
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 104/179 (58%), Gaps = 17/179 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP RR G G G G G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGP----RRDGSYGSGRSGYGYRRSGRD--KYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ + + GV+++ + DMK A+ KLD TE
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNE-GVIEFVSYSDMKRALEKLDGTEV 165
>gi|119628064|gb|EAX07659.1| splicing factor, arginine/serine-rich 4, isoform CRA_c [Homo
sapiens]
Length = 464
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 105/179 (58%), Gaps = 17/179 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP R G YG +G +G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGPR---RDGSYG---SGRSGYGYRRSGRDKYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ + + GV+++ + DMK A+ KLD TE
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNE-GVIEFVSYSDMKRALEKLDGTEV 165
>gi|30585347|gb|AAP36946.1| Homo sapiens splicing factor, arginine/serine-rich 4 [synthetic
construct]
gi|60652653|gb|AAX29021.1| splicing factor arginine/serine-rich 4 [synthetic construct]
Length = 495
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 105/179 (58%), Gaps = 17/179 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP R G YG +G +G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGPR---RDGSYG---SGRSGYGYRRSGRDKYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ + + GV+++ + DMK A+ KLD TE
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNE-GVIEFVSYSDMKRALEKLDGTEV 165
>gi|114555162|ref|XP_001155042.1| PREDICTED: serine/arginine-rich splicing factor 4 isoform 5 [Pan
troglodytes]
gi|397515847|ref|XP_003828154.1| PREDICTED: serine/arginine-rich splicing factor 4 [Pan paniscus]
gi|261858864|dbj|BAI45954.1| splicing factor, arginine/serine-rich 4 [synthetic construct]
gi|410219650|gb|JAA07044.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410253776|gb|JAA14855.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410253778|gb|JAA14856.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410300938|gb|JAA29069.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410356834|gb|JAA44544.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
Length = 494
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 105/179 (58%), Gaps = 17/179 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP R G YG +G +G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGPR---RDGSYG---SGRSGYGYRRSGRDKYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ + + GV+++ + DMK A+ KLD TE
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNE-GVIEFVSYSDMKRALEKLDGTEV 165
>gi|21361282|ref|NP_005617.2| serine/arginine-rich splicing factor 4 [Homo sapiens]
gi|20981726|sp|Q08170.2|SRSF4_HUMAN RecName: Full=Serine/arginine-rich splicing factor 4; AltName:
Full=Pre-mRNA-splicing factor SRP75; AltName:
Full=SRP001LB; AltName: Full=Splicing factor,
arginine/serine-rich 4
gi|12803875|gb|AAH02781.1| Splicing factor, arginine/serine-rich 4 [Homo sapiens]
gi|30583669|gb|AAP36083.1| splicing factor, arginine/serine-rich 4 [Homo sapiens]
gi|60655747|gb|AAX32437.1| splicing factor arginine/serine-rich 4 [synthetic construct]
gi|123994341|gb|ABM84772.1| splicing factor, arginine/serine-rich 4 [synthetic construct]
Length = 494
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 105/179 (58%), Gaps = 17/179 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP R G YG +G +G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGPR---RDGSYG---SGRSGYGYRRSGRDKYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ + + GV+++ + DMK A+ KLD TE
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNE-GVIEFVSYSDMKRALEKLDGTEV 165
>gi|296207272|ref|XP_002750572.1| PREDICTED: serine/arginine-rich splicing factor 4 [Callithrix
jacchus]
Length = 500
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 105/179 (58%), Gaps = 17/179 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP R G YG +G +G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGPR---RDGSYG---SGRSGYGYRRSGRDKYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ + + GV+++ + DMK A+ KLD TE
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNE-GVIEFVSYSDMKRALEKLDGTEV 165
>gi|431891168|gb|ELK02045.1| Splicing factor, arginine/serine-rich 4 [Pteropus alecto]
Length = 500
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 104/179 (58%), Gaps = 17/179 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP RR G G G G G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGP----RRDGSYGSGRSGYGYRRSGRD--KYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ + + GV+++ + DMK A+ KLD TE
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNE-GVIEFVSYSDMKRALEKLDGTEV 165
>gi|403293287|ref|XP_003937651.1| PREDICTED: serine/arginine-rich splicing factor 4 [Saimiri
boliviensis boliviensis]
Length = 500
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 105/179 (58%), Gaps = 17/179 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP R G YG +G +G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGPR---RDGSYG---SGRSGYGYRRSGRDKYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ + + GV+++ + DMK A+ KLD TE
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNE-GVIEFVSYSDMKRALEKLDGTEV 165
>gi|442749577|gb|JAA66948.1| Putative alternative splicing factor srp55/b52/srp75 rrm
superfamily [Ixodes ricinus]
Length = 268
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 100/179 (55%), Gaps = 9/179 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G+L +RE +++ F YGR+ DI LK + FVEF++ RDA+DAI +G
Sbjct: 5 VFIGHLSCQVREKDLDKFFKGYGRVGDIHLK-----NGFGFVEFDDHRDADDAISDLNGK 59
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VELA+G S RGP R RFG + +EY++I
Sbjct: 60 ELLGERVSVELAYG-SRRGPGG--RIVPPRPDWRSPPPRRPFAPRDTRFGPPQRTEYQLI 116
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ + GVV++ N DMK AI KLD+T+
Sbjct: 117 VENLSSHVSWQDLKDYMRQAGEVTYADAHK-IRPNEGVVEFANYSDMKNAISKLDNTDL 174
>gi|429329410|gb|AFZ81169.1| splicing factor 1, putative [Babesia equi]
Length = 207
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 103/192 (53%), Gaps = 31/192 (16%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNLP D + EVE+ F K+G+I+ ELK + FVEF + RDA DAI+ +DG
Sbjct: 9 LYVGNLPDDCTQREVEEEFEKFGKIVYCELKRTVSGLPFAFVEFSDYRDARDAIKNKDGA 68
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
F+G RLRVE+ P SS R+ + R R +Y V
Sbjct: 69 EFNGKRLRVEV--------PFSSKRQ-------------------SRRSDPPRKGKYLVE 101
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP + SWQDLKDH+R AG+ A V R G G V + + DM+YAI K D + F+
Sbjct: 102 VTGLPPTGSWQDLKDHLRAAGECGHANVFR---GGVGEVSFFSRGDMEYAIDKFDGSTFK 158
Query: 189 -NPWARGRITVK 199
+ + RITV+
Sbjct: 159 SHQGEKARITVR 170
>gi|341902095|gb|EGT58030.1| CBN-RSP-3 protein [Caenorhabditis brenneri]
Length = 275
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 100/179 (55%), Gaps = 13/179 (7%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGN+P D + ++ DLF YGR+L +++K + + FV + + RDA+DA+ D +
Sbjct: 9 LYVGNIPEDATKEDIYDLFETYGRVLYVDIK-NGKISRFAFVAYRDFRDADDAVNYLDKF 67
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ G LRVE + +G GP G+GG G G G R S++RV
Sbjct: 68 DYHGRSLRVEHS---TGVGPR------GWGGQPLSSINGDNFRIARGPGGPQRRSDFRVF 118
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V G+P + SWQDLKDH R AG++CFA +S + G+V++ ++ +I D TEF
Sbjct: 119 VEGIPQTGSWQDLKDHFRPAGEICFAMISHNKT---GIVEFEKKSSVQRSIDIFDKTEF 174
>gi|307438|gb|AAA36649.1| pre-mRNA splicing factor [Homo sapiens]
Length = 494
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 104/179 (58%), Gaps = 17/179 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP RR G G G G G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGP----RRDGSYGSGRSGYGYRRSGRD--KYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ + + GV+++ + DMK A+ KLD TE
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNE-GVIEFVSYSDMKRALEKLDGTEV 165
>gi|351695941|gb|EHA98859.1| Splicing factor, arginine/serine-rich 4 [Heterocephalus glaber]
Length = 489
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 104/179 (58%), Gaps = 17/179 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP RR G G G G G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGP----RRDGSYGSGRSGYGYRRSGRD--KYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ + + GV+++ + DMK A+ KLD TE
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNE-GVIEFVSYSDMKRALEKLDGTEV 165
>gi|170045194|ref|XP_001850202.1| 52K active chromatin boundary protein [Culex quinquefasciatus]
gi|167868189|gb|EDS31572.1| 52K active chromatin boundary protein [Culex quinquefasciatus]
Length = 370
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/181 (43%), Positives = 103/181 (56%), Gaps = 9/181 (4%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSS--SDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G R+ VE A G + RGP RGG G G GG + R+G +EYR
Sbjct: 61 ELLGERVVVEPARG-TARGPGGRREYDRGGDRYGDRGRGGGGRYDKNSSRYGPPLRTEYR 119
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTE 186
+IV L S SWQDLKD+MR+AG+V +A+ + + GVV++ DMK AI KLDDTE
Sbjct: 120 LIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRKNE-GVVEFATSSDMKTAIEKLDDTE 178
Query: 187 F 187
Sbjct: 179 L 179
>gi|159463554|ref|XP_001690007.1| SR protein factor [Chlamydomonas reinhardtii]
gi|158283995|gb|EDP09745.1| SR protein factor [Chlamydomonas reinhardtii]
Length = 338
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 50/74 (67%), Positives = 61/74 (82%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VGNLP D+RE EVEDLF+KYGRI ++LKI PRPP + FVEFE+ RDA DA+RGRDG
Sbjct: 6 VFVGNLPMDVREREVEDLFFKYGRIRSVDLKIGPRPPAFAFVEFEDERDAADAVRGRDGI 65
Query: 69 NFDGCRLRVELAHG 82
F G RLRVE++HG
Sbjct: 66 EFQGQRLRVEVSHG 79
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 60/127 (47%), Gaps = 47/127 (37%)
Query: 113 GAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNP 172
G FG SR +++RVIV LP S SWQDLKDHMR+AG+V F++V RD G G++DY
Sbjct: 157 GPNPFGPSRRTDFRVIVTNLPLSCSWQDLKDHMRRAGEVTFSQVMRDGRGMLGLIDYATR 216
Query: 173 EDMKYAIRKLDDTEFRNPW----------------------------------------- 191
D++ A+RKLDD+EF+NP+
Sbjct: 217 SDLELALRKLDDSEFKNPYDTARIRVREDRGDGPAGVSGGGSRGRRSRSRSKSRSKSRSR 276
Query: 192 ------A 192
+
Sbjct: 277 SRSKSRS 283
>gi|62898449|dbj|BAD97164.1| splicing factor, arginine/serine-rich 4 variant [Homo sapiens]
Length = 382
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 105/179 (58%), Gaps = 17/179 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP R G YG +G +G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGPR---RDGSYG---SGRSGYGYRRSGRDKYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ + + GV+++ + DMK A+ KLD TE
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNE-GVIEFVSYSDMKRALEKLDGTEV 165
>gi|307192389|gb|EFN75624.1| Serine-arginine protein 55 [Harpegnathos saltator]
Length = 313
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 101/193 (52%), Gaps = 17/193 (8%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S ++VG L +RE ++E F KYGRI ++ +K + FVEF++ RDA+DA+
Sbjct: 1 MSTRVFVGGLTYRVRERDLEKFFRKYGRIKEVAMKN-----GFAFVEFDDYRDADDAVYE 55
Query: 65 RDGYNFDGCRLRVELAHGGSGRGPSS---SDRRGGYGGG-------GAGGAGGAGAGAGA 114
+G G R+ VE A G + RG D RGGYG +
Sbjct: 56 LNGKELLGERITVERARG-TPRGSDQWRYGDSRGGYGDSRRSADSVNRNTRTASSYKQSL 114
Query: 115 GRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPED 174
R+G +EYR+ V L S SWQDLKD+MR+AG+V +A+ + GVV++ D
Sbjct: 115 PRYGPPTRTEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNE-GVVEFATYSD 173
Query: 175 MKYAIRKLDDTEF 187
+K AI KLDDTE
Sbjct: 174 LKNAIDKLDDTEL 186
>gi|347972221|ref|XP_003436860.1| AGAP004592-PE [Anopheles gambiae str. PEST]
gi|333469348|gb|EGK97259.1| AGAP004592-PE [Anopheles gambiae str. PEST]
Length = 351
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 75/181 (41%), Positives = 101/181 (55%), Gaps = 9/181 (4%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGG--AGAGAGAGRFGISRHSEYR 126
G R+ VE A G+ RGPS R Y GG + R+G +EYR
Sbjct: 61 ELLGERVVVEPAR-GTARGPSGYRERDRYDRDRRGGRYDKYKSNSRNSSRYGPPLRTEYR 119
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTE 186
++V L + SWQDLKD+MR+AG+V +A+ + + GVV++ DMK AI KLDDTE
Sbjct: 120 LVVENLSTRVSWQDLKDYMRQAGEVTYADAHKQRKNE-GVVEFATLSDMKTAIEKLDDTE 178
Query: 187 F 187
Sbjct: 179 L 179
>gi|195144342|ref|XP_002013155.1| GL23543 [Drosophila persimilis]
gi|194102098|gb|EDW24141.1| GL23543 [Drosophila persimilis]
Length = 358
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 78/179 (43%), Positives = 103/179 (57%), Gaps = 9/179 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A G + RG S+ R GG G GG + R+G +EYR+I
Sbjct: 61 ELLGERVVVEPARG-TARG--SNRDRYDDRYGGRRGGGGRYNDKSSSRYGPPLRTEYRLI 117
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ + GVV++ + DMK AI KLDDTE
Sbjct: 118 VENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNE-GVVEFASLSDMKTAIEKLDDTEL 175
>gi|116175257|ref|NP_001070684.1| serine/arginine-rich splicing factor 4 [Sus scrofa]
gi|115371753|gb|ABI96201.1| SFRS4 [Sus scrofa]
Length = 491
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 105/179 (58%), Gaps = 17/179 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP R G YG +G +G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGPR---RDGSYG---SGRSGYGYRRSGRDKYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ + + GV+++ + DMK A+ KLD TE
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNE-GVIEFVSYSDMKRALEKLDGTEV 165
>gi|344287504|ref|XP_003415493.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Loxodonta
africana]
Length = 500
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 104/179 (58%), Gaps = 17/179 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP RR G G G G G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGP----RRDGSYGSGRSGYGYRRSGRD--KYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ + + GV+++ + DMK A+ KLD TE
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNE-GVIEFLSYSDMKRALEKLDGTEV 165
>gi|28571689|ref|NP_788665.1| B52, isoform A [Drosophila melanogaster]
gi|28571699|ref|NP_788666.1| B52, isoform C [Drosophila melanogaster]
gi|386765710|ref|NP_788667.2| B52, isoform N [Drosophila melanogaster]
gi|21064205|gb|AAM29332.1| AT29232p [Drosophila melanogaster]
gi|23171192|gb|AAF54969.2| B52, isoform A [Drosophila melanogaster]
gi|23171193|gb|AAN13575.1| B52, isoform C [Drosophila melanogaster]
gi|25012274|gb|AAN71250.1| LD30815p [Drosophila melanogaster]
gi|27820026|gb|AAO25044.1| GM10155p [Drosophila melanogaster]
gi|220950988|gb|ACL88037.1| B52-PA [synthetic construct]
gi|220957884|gb|ACL91485.1| B52-PA [synthetic construct]
gi|383292690|gb|AAN13576.2| B52, isoform N [Drosophila melanogaster]
Length = 350
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 105/179 (58%), Gaps = 8/179 (4%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A G + RG S+ DR GG GG GG + R+G +EYR+I
Sbjct: 61 ELLGERVVVEPARG-TARG-SNRDRYDDRYGGRRGGGGGRYNEKSSSRYGPPLRTEYRLI 118
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ + GVV++ + DMK AI KLDDTE
Sbjct: 119 VENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNE-GVVEFASLSDMKTAIEKLDDTEL 176
>gi|399219025|emb|CCF75912.1| unnamed protein product [Babesia microti strain RI]
Length = 227
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 102/192 (53%), Gaps = 31/192 (16%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNLPS+ + E+E+ F K+G+I ++K + FVEFE+ RDA+DAI+ +DGY
Sbjct: 10 VYVGNLPSECDQREIEEEFEKFGKIKRCDVKRGANGSSFAFVEFEDPRDAKDAIKEKDGY 69
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
F G RLRVE+ SDR GY + R R Y V
Sbjct: 70 EFKGSRLRVEVPF---------SDR--GY----------------SRRRPTPRRGHYTVE 102
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR AG+ A+V R G G V + + DM AI D + FR
Sbjct: 103 VLGLPPSGSWQDLKDHMRDAGECGHADVFR---GGVGEVSFFSRRDMDAAIEMFDGSTFR 159
Query: 189 -NPWARGRITVK 199
+ + +ITV+
Sbjct: 160 SHEGEKAKITVR 171
>gi|198452967|ref|XP_001359013.2| GA10599 [Drosophila pseudoobscura pseudoobscura]
gi|198132156|gb|EAL28156.2| GA10599 [Drosophila pseudoobscura pseudoobscura]
Length = 357
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/179 (43%), Positives = 103/179 (57%), Gaps = 9/179 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A G + RG S+ R GG G GG + R+G +EYR+I
Sbjct: 61 ELLGERVVVEPARG-TARG--SNRDRYDDRYGGRRGGGGRYNDKSSSRYGPPLRTEYRLI 117
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ + GVV++ + DMK AI KLDDTE
Sbjct: 118 VENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNE-GVVEFASLSDMKTAIEKLDDTEL 175
>gi|194741292|ref|XP_001953123.1| GF17608 [Drosophila ananassae]
gi|190626182|gb|EDV41706.1| GF17608 [Drosophila ananassae]
Length = 350
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/179 (43%), Positives = 103/179 (57%), Gaps = 9/179 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A G + RG S+ R GG G GG + R+G +EYR+I
Sbjct: 61 ELLGERVVVEPARG-TARG--SNRDRYDDRYGGRRGGGGRYNDKSSSRYGPPLRTEYRLI 117
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ + GVV++ + DMK AI KLDDTE
Sbjct: 118 VENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNE-GVVEFASLSDMKTAIEKLDDTEL 175
>gi|388856974|emb|CCF49394.1| related to pre-mrna splicing factor srp55 [Ustilago hordei]
Length = 259
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 106/193 (54%), Gaps = 18/193 (9%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVG LP+D+R ++EDLF YGR+ D+ + + FVEFE+ RDAEDA++
Sbjct: 1 MSTRVYVGKLPADVRRGDIEDLFRDYGRLYDVRIM-----GTFGFVEFEHHRDAEDAVKD 55
Query: 65 RDGYNFDGCRLRVELAHGGSGRGPSSS-------DRRGGYGGGGAGGAGGAGAGAGAGRF 117
DG NF G R+ V+ A R P + DRRGG GG G+ R
Sbjct: 56 FDGKNFMGERIVVQHAKQSERRRPEPAGYGSDPYDRRGG-GGREPPSRYGSSVAPPPRRE 114
Query: 118 GISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEV--SRDSEGTYGVVDYTNPEDM 175
R ++R IV LP + SWQDLKD R+ G V FA+V +R E GV++Y N +D
Sbjct: 115 PRLRRGQFRCIVSNLPPNTSWQDLKDIGREHGSVSFADVDAARPDE---GVIEYDNRDDY 171
Query: 176 KYAIRKLDDTEFR 188
+ A+ K++ TE R
Sbjct: 172 ERALDKIEGTELR 184
>gi|78099805|sp|P26686.4|SRR55_DROME RecName: Full=Serine-arginine protein 55; Short=SRP55; AltName:
Full=52 kDa bracketing protein; AltName: Full=B52
protein; AltName: Full=Protein enhancer of deformed
Length = 376
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/182 (42%), Positives = 100/182 (54%), Gaps = 9/182 (4%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHG---GSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
G R+ VE A G GS R G GGGG + R+G +EY
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEY 120
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
R+IV L S SWQDLKD+MR+AG+V +A+ + GVV++ + DMK AI KLDDT
Sbjct: 121 RLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNE-GVVEFASLSDMKTAIEKLDDT 179
Query: 186 EF 187
E
Sbjct: 180 EL 181
>gi|386765708|ref|NP_788671.2| B52, isoform M [Drosophila melanogaster]
gi|386765712|ref|NP_001014619.2| B52, isoform O [Drosophila melanogaster]
gi|312596948|gb|ADQ89797.1| GH20537p [Drosophila melanogaster]
gi|383292689|gb|AAN13579.2| B52, isoform M [Drosophila melanogaster]
gi|383292691|gb|AAX52949.2| B52, isoform O [Drosophila melanogaster]
Length = 355
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/182 (42%), Positives = 100/182 (54%), Gaps = 9/182 (4%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHG---GSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
G R+ VE A G GS R G GGGG + R+G +EY
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEY 120
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
R+IV L S SWQDLKD+MR+AG+V +A+ + GVV++ + DMK AI KLDDT
Sbjct: 121 RLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNE-GVVEFASLSDMKTAIEKLDDT 179
Query: 186 EF 187
E
Sbjct: 180 EL 181
>gi|320168404|gb|EFW45303.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 239
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 97/176 (55%), Gaps = 28/176 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG + +D RE +VE LF KYGR D+ LK + FVEF++ RDA+DA+R G
Sbjct: 4 LYVGRVSADARERDVEHLFGKYGRTRDVTLK-----NGFGFVEFDDVRDADDAMRDLHGR 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+F G RL VE A+ G R R RF ++YRV+
Sbjct: 59 DFMGDRLIVERANSGGRRDRGEPRER---------------------RFAPPTRTQYRVL 97
Query: 129 VRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLD 183
V L + SWQDLKD +R G +V FA+ R+ +GT GVV++ N DM++AIR+LD
Sbjct: 98 VENLSTRISWQDLKDFVRTCGVEVTFADAHRERDGT-GVVEFANSTDMRHAIRRLD 152
>gi|221057011|ref|XP_002259643.1| Splicing factor [Plasmodium knowlesi strain H]
gi|193809715|emb|CAQ40417.1| Splicing factor, putative [Plasmodium knowlesi strain H]
Length = 312
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 111/200 (55%), Gaps = 21/200 (10%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS SR IYVGNLPS + +VE+ F KYG IL ++K + F+EFE+ARDA D
Sbjct: 3 MSESISR-IYVGNLPSHVSPRDVENEFRKYGNILKCDVKKTVSGAAFAFIEFEDARDAAD 61
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI+ +DG ++ G +LRVE+ P ++ G YG G G G G +
Sbjct: 62 AIKEKDGSDYGGNKLRVEV--------PFNARDNGKYGPRGGRGMMGRGMRSRR------ 107
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
Y V V GLP S SWQDLKDH+R+AG+ A+V ++ G V + + EDM AI
Sbjct: 108 --GRYVVEVSGLPLSGSWQDLKDHLREAGECGHADVFKNG---IGEVSFFHKEDMLEAIE 162
Query: 181 KLDDTEFR-NPWARGRITVK 199
K + + FR + + +IT++
Sbjct: 163 KFNGSTFRSHEGEKSKITIR 182
>gi|403221223|dbj|BAM39356.1| splicing factor [Theileria orientalis strain Shintoku]
Length = 334
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 94/192 (48%), Gaps = 29/192 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKI--PPRPPCYCFVEFENARDAEDAIRGRD 66
++VGNLP + ++ DLF K+G I DI++K Y F++F + R AEDA+ RD
Sbjct: 15 VFVGNLPEKVDNRDIHDLFDKFGEIKDIDIKHGKTTNYTSYAFIDFASVRSAEDAVDSRD 74
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
GY +D +LRVE A G G R ++YR
Sbjct: 75 GYEYDRYKLRVEFA-----------------------GEGKPRKHDDDRRDRDRHRTDYR 111
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTE 186
+++ LP WQ LKDHMRKAG V + +S G VD+ + DMKYA+RK+D +E
Sbjct: 112 LVISNLPHGCRWQHLKDHMRKAGPVGYVNISHGK----GYVDFIHKSDMKYALRKMDGSE 167
Query: 187 FRNPWARGRITV 198
P RI +
Sbjct: 168 LSTPDDTSRIKL 179
>gi|325182716|emb|CCA17171.1| splicing factor putative [Albugo laibachii Nc14]
Length = 224
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 95/175 (54%), Gaps = 28/175 (16%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
I+VGNLP++I E ++ F K+G+I I LK+P RPP + F+E+E + A++A+R +G
Sbjct: 4 IFVGNLPTEIDEETLQSHFSKHGQIACIRLKVPSRPPAFAFIEYEESSGADNAVRESNGI 63
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G ++RVE++ G + +S + RFG ++YRV
Sbjct: 64 ELLGSKIRVEISRSGPNQTRDTSSNK---------------------RFG----TQYRVT 98
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLD 183
V L S SWQDLKD R+ GDV V D G+ GV + ++M+ AIRKLD
Sbjct: 99 VSNLSSKISWQDLKDFFRRGGDVVHTNV--DHSGS-GVGSFATYDEMERAIRKLD 150
>gi|195451842|ref|XP_002073099.1| GK13948 [Drosophila willistoni]
gi|194169184|gb|EDW84085.1| GK13948 [Drosophila willistoni]
Length = 362
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/182 (42%), Positives = 102/182 (56%), Gaps = 10/182 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPS---SSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
G R+ VE A G + RG + DR G GGG + R+G +EY
Sbjct: 61 ELLGERVVVEPARG-TARGSNRDRYDDRYGNRRGGGGRYNDKNKNSRSSSRYGPPLRTEY 119
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
R+IV L S SWQDLKD+MR+AG+V +A+ + GVV++ + DMK AI KLDDT
Sbjct: 120 RLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNE-GVVEFASLSDMKTAIEKLDDT 178
Query: 186 EF 187
E
Sbjct: 179 EL 180
>gi|7637|emb|CAA44483.1| 52-kD bracketing protein [Drosophila melanogaster]
Length = 376
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/182 (42%), Positives = 100/182 (54%), Gaps = 9/182 (4%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHG---GSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
G R+ VE A G GS R G GGGG + R+G +EY
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEY 120
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
R+IV L S SWQDLKD+MR+AG+V +A+ + GVV++ + DMK AI KLDDT
Sbjct: 121 RLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNE-GVVEFASLSDMKTAIEKLDDT 179
Query: 186 EF 187
E
Sbjct: 180 EL 181
>gi|70947849|ref|XP_743501.1| splicing factor [Plasmodium chabaudi chabaudi]
gi|56523027|emb|CAH75823.1| splicing factor, putative [Plasmodium chabaudi chabaudi]
Length = 283
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 85/154 (55%), Gaps = 17/154 (11%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLPS + +VE+ F K+G IL ++K + F+EFE+ARDA DAI+ +DG
Sbjct: 10 IYVGNLPSHVTSRDVENEFRKFGTILKCDVKKTVSGAAFAFIEFEDARDAADAIKEKDGC 69
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+F G +LRVE+ G SS RG G G SR Y V
Sbjct: 70 DFGGNKLRVEVPFNARDNGKYSSRGRGMMGRGSK-----------------SRRGRYVVE 112
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEG 162
V GLP S SWQDLKDH+R+AG+ A+V ++ G
Sbjct: 113 VSGLPLSGSWQDLKDHLREAGECGHADVFKNGTG 146
>gi|28571691|ref|NP_788668.1| B52, isoform B [Drosophila melanogaster]
gi|7299789|gb|AAF54968.1| B52, isoform B [Drosophila melanogaster]
Length = 329
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/182 (42%), Positives = 100/182 (54%), Gaps = 9/182 (4%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHG---GSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
G R+ VE A G GS R G GGGG + R+G +EY
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEY 120
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
R+IV L S SWQDLKD+MR+AG+V +A+ + GVV++ + DMK AI KLDDT
Sbjct: 121 RLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNE-GVVEFASLSDMKTAIEKLDDT 179
Query: 186 EF 187
E
Sbjct: 180 EL 181
>gi|195036928|ref|XP_001989920.1| GH18528 [Drosophila grimshawi]
gi|193894116|gb|EDV92982.1| GH18528 [Drosophila grimshawi]
Length = 360
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/179 (44%), Positives = 105/179 (58%), Gaps = 9/179 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A G + RG S+ DR GG GG G + + R+G +EYR+I
Sbjct: 61 ELLGERVVVEPARG-TARG-SNRDRYEDRYGGRRGGGGRYNDKSSS-RYGPPLRTEYRLI 117
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ + GVV++ + DMK AI KLDDTE
Sbjct: 118 VENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNE-GVVEFASLSDMKTAIEKLDDTEL 175
>gi|410911524|ref|XP_003969240.1| PREDICTED: uncharacterized protein LOC101080136 isoform 2 [Takifugu
rubripes]
Length = 374
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 101/179 (56%), Gaps = 15/179 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYRARENDVERFFKGYGKILEVDLK-----NGYGFVEFDDPRDADDAVYDLNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE +GP R GGY G GG G G R+G ++YR+I
Sbjct: 59 ELCGERVIVEHT-----KGPR---RDGGYSGRSKPRPGGYGR-WGRDRYGPPIRTDYRLI 109
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ + + GV+++ DMK A+ KLD TE
Sbjct: 110 VENLSSRCSWQDLKDYMRQAGEVTYADTHKGRKNE-GVIEFRQYSDMKRALEKLDGTEV 167
>gi|195390405|ref|XP_002053859.1| GJ24113 [Drosophila virilis]
gi|194151945|gb|EDW67379.1| GJ24113 [Drosophila virilis]
Length = 347
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/179 (43%), Positives = 103/179 (57%), Gaps = 9/179 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A G + RG S+ R GG G GG + R+G +EYR+I
Sbjct: 61 ELLGERVVVEPARG-TARG--SNRDRYDDRYGGRRGGGGRYNDKSSSRYGPPLRTEYRLI 117
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ + GVV++ + DMK AI KLDDTE
Sbjct: 118 VENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNE-GVVEFASLSDMKTAIEKLDDTEL 175
>gi|299472989|emb|CBN77390.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 313
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 64/74 (86%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+GNLP D++E ++ED+FYKYG+I D++LK+P RPP + FV FE++RDA++A+R RDGY
Sbjct: 56 LYIGNLPMDMKEKDLEDIFYKYGKITDMQLKMPERPPAFGFVTFEDSRDADEAVRARDGY 115
Query: 69 NFDGCRLRVELAHG 82
+FDG RLRVE++ G
Sbjct: 116 DFDGYRLRVEMSRG 129
>gi|241159531|ref|XP_002408582.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
gi|215494365|gb|EEC04006.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
Length = 339
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 99/179 (55%), Gaps = 23/179 (12%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VG L D+RE ++E F YGRI ++ LK Y FVEF++ RDAEDA+ +G
Sbjct: 5 VFVGRLNYDVRERDLEKFFKGYGRIGEVLLK-----NGYGFVEFDDYRDAEDAVHDLNGK 59
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VELA G RGP + GYGG + + R+G +EY+++
Sbjct: 60 KLMGERISVELARGIR-RGPGT-----GYGGASS-----------SRRYGPPSRTEYQLL 102
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L SS SWQDLKD MR+AG+V + + + GVV++ DMK A+ KL+ +
Sbjct: 103 VENLSSSVSWQDLKDFMRQAGEVTYTDAHKLRRNE-GVVEFATYSDMKNALIKLNHMDL 160
>gi|68075657|ref|XP_679748.1| splicing factor [Plasmodium berghei strain ANKA]
gi|56500569|emb|CAH96908.1| splicing factor, putative [Plasmodium berghei]
Length = 287
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 85/154 (55%), Gaps = 17/154 (11%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLPS + +VE+ F K+G IL ++K + F+EFE+ARDA DAI+ +DG
Sbjct: 10 IYVGNLPSHVTSRDVENEFRKFGTILKCDVKKTVSGAAFAFIEFEDARDAADAIKEKDGC 69
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+F G +LRVE+ G +S RG G G SR Y V
Sbjct: 70 DFGGNKLRVEVPFNARDNGKYNSRGRGMMGRGSK-----------------SRRGRYVVE 112
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEG 162
V GLP S SWQDLKDH+R+AG+ A+V ++ G
Sbjct: 113 VSGLPLSGSWQDLKDHLREAGECGHADVFKNGTG 146
>gi|443899862|dbj|GAC77190.1| alternative splicing factor SRp55/B52/SRp75 [Pseudozyma antarctica
T-34]
Length = 260
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 102/190 (53%), Gaps = 15/190 (7%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVG LP D+R +++DLF YGR+ D+ + + FVEFE+ RDAEDA++
Sbjct: 1 MSTRVYVGKLPPDVRRGDIDDLFRDYGRLQDVRIMG-----SFGFVEFEHPRDAEDAVKD 55
Query: 65 RDGYNFDGCRLRVELAHGG------SGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFG 118
DG NF G R+ V+ A G +G G DRRGG G GA R
Sbjct: 56 FDGRNFMGERIVVQHAKSGERRREPAGYGADPYDRRGGPPGREPPSRYGAPPPRREPR-- 113
Query: 119 ISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYA 178
R ++R IV LP + SWQDLKD R+ G + FA+V S GV++Y N +D + A
Sbjct: 114 -IRRGQFRCIVSNLPPNTSWQDLKDIGREHGSISFADVDP-SRPDEGVIEYDNRDDYERA 171
Query: 179 IRKLDDTEFR 188
+ K++ E R
Sbjct: 172 LDKIEGIELR 181
>gi|294950021|ref|XP_002786421.1| Serine-arginine protein, putative [Perkinsus marinus ATCC 50983]
gi|239900713|gb|EER18217.1| Serine-arginine protein, putative [Perkinsus marinus ATCC 50983]
Length = 317
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/199 (38%), Positives = 106/199 (53%), Gaps = 28/199 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELK------IPPRPPCYCFVEFENARDAEDAI 62
I V N+PS++RE E++D+FYK+GRI IE++ R Y +V+F + +DA DA
Sbjct: 4 IVVSNIPSNLRERELDDIFYKFGRIESIEIRGARINESSRRRTAYAYVQFRDWQDAADAA 63
Query: 63 RGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGR------ 116
+ R+GY DG + VE+ S D RG Y G G G G G+
Sbjct: 64 KSRNGYEIDGQPITVEVD------SDSRDDSRGPYAKGKGKGGRYDDYGGGYGKGGSGSP 117
Query: 117 ------FGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYT 170
G+S + YRV+V LP ASWQDLKD MR AG+ F EV+RD GV +
Sbjct: 118 LGFYDSMGMSENY-YRVVVTNLPRGASWQDLKDRMRDAGECRFTEVTRDG---VGVAGFA 173
Query: 171 NPEDMKYAIRKLDDTEFRN 189
D++ A+R LDDTE ++
Sbjct: 174 GQSDVERAVRTLDDTEMKS 192
>gi|195113427|ref|XP_002001269.1| GI22065 [Drosophila mojavensis]
gi|193917863|gb|EDW16730.1| GI22065 [Drosophila mojavensis]
Length = 361
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 101/182 (55%), Gaps = 10/182 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGA---GRFGISRHSEY 125
G R+ VE A G + RG + YGG GG + R+G +EY
Sbjct: 61 ELLGERVVVEPARG-TARGSNRDRYDDRYGGRRGGGGRYNDKNKNSRSSSRYGPPLRTEY 119
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
R+IV L S SWQDLKD+MR+AG+V +A+ + GVV++ + DMK AI KLDDT
Sbjct: 120 RLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNE-GVVEFASLSDMKTAIEKLDDT 178
Query: 186 EF 187
E
Sbjct: 179 EL 180
>gi|428182228|gb|EKX51089.1| hypothetical protein GUITHDRAFT_161608 [Guillardia theta CCMP2712]
Length = 258
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 93/185 (50%), Gaps = 36/185 (19%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG+L S +RE +++D F ++G+I DI LK + FVE++++ DAE A+R DG
Sbjct: 7 VYVGHLSSRVRERDLDDEFSRFGKIRDISLK-----QGFAFVEYDHSEDAEYAVRKMDGV 61
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
N +G R+ VE A RGP RGG G YR+
Sbjct: 62 NLEGMRILVEFAKETPKRGP-----RGGSG--------------------------YRIY 90
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
L + SWQDLKD RKAG V + +V + GV++Y EDM+ A+ KLD TE
Sbjct: 91 AENLSQNTSWQDLKDFARKAGKVIYTDVFSERGEKLGVIEYATREDMEDALYKLDGTELH 150
Query: 189 NPWAR 193
R
Sbjct: 151 RSKVR 155
>gi|2914669|gb|AAC04476.1| SRP0001LB [Homo sapiens]
Length = 192
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 105/178 (58%), Gaps = 17/178 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP R G YG +G +G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGPR---RDGSYG---SGRSGYGYRRSGRDKYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTE 186
V L S SWQDLKD+MR+AG+V +A+ + + GV+++ + DMK A+ KLD TE
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNE-GVIEFVSYSDMKRALEKLDGTE 164
>gi|395513899|ref|XP_003761159.1| PREDICTED: serine/arginine-rich splicing factor 9 [Sarcophilus
harrisii]
Length = 274
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/133 (46%), Positives = 78/133 (58%), Gaps = 27/133 (20%)
Query: 57 DAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGR 116
DAEDAI GR+GY++ CRLRVEL G G
Sbjct: 120 DAEDAIYGRNGYDYGQCRLRVELP------------------------RNPGGGGPRGRT 155
Query: 117 FGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMK 176
SR SEYRV+V GLP S SWQDLKDHMR+AG VC+A+V +D GVV++ EDM+
Sbjct: 156 GPPSRRSEYRVLVSGLPPSGSWQDLKDHMREAGGVCYADVQKDG---MGVVEFLRKEDME 212
Query: 177 YAIRKLDDTEFRN 189
YA+R+LDD++FR+
Sbjct: 213 YALRRLDDSKFRS 225
>gi|432092851|gb|ELK25217.1| Serine/arginine-rich splicing factor 9 [Myotis davidii]
Length = 199
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/134 (47%), Positives = 81/134 (60%), Gaps = 24/134 (17%)
Query: 56 RDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAG 115
RDAEDA+ GR+GY++ CRLRVE GR G G
Sbjct: 41 RDAEDAVYGRNGYDYGQCRLRVEFPRAYGGR---------------------GGWPRGGR 79
Query: 116 RFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDM 175
+R S++RV+V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y EDM
Sbjct: 80 NGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDM 136
Query: 176 KYAIRKLDDTEFRN 189
+YA+RKLDDT+FR+
Sbjct: 137 EYALRKLDDTKFRS 150
>gi|196004628|ref|XP_002112181.1| hypothetical protein TRIADDRAFT_23659 [Trichoplax adhaerens]
gi|190586080|gb|EDV26148.1| hypothetical protein TRIADDRAFT_23659 [Trichoplax adhaerens]
Length = 266
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 99/179 (55%), Gaps = 16/179 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L RE +VE F +G+I ++ LK + FVEF++ RDAEDAI +
Sbjct: 4 VYVGRLSYRARERDVEHFFRGFGKIREVTLK-----NGFGFVEFDDPRDAEDAIYELNNR 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A +G DRRG Y RFG R++E+R++
Sbjct: 59 DLMGERVIVEFA-----KGTRYDDRRGAYP------LITPSYLLFRPRFGRPRNTEWRLV 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
+ L S A+W+D+KD+MR+AGDV FA+ + GVVD+ +DMK A+++LD TE
Sbjct: 108 INNLSSRATWRDIKDYMRQAGDVTFADAHKQLGEGRGVVDFATYDDMKDALKRLDGTEL 166
>gi|189233695|ref|XP_001812208.1| PREDICTED: similar to B52 CG10851-PA [Tribolium castaneum]
Length = 300
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 99/179 (55%), Gaps = 14/179 (7%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VG L +RE ++E F KYGRI ++ +K + FVEF++ RDA+DA+ +G
Sbjct: 5 VFVGGLTYRVRERDIEKFFRKYGRIKEVAMK-----NGFAFVEFDDYRDADDAVYELNGK 59
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A G P D+ G G G G ++G +EYR+I
Sbjct: 60 ELLGERVSVERARG----TPRGCDQ----WRGSGGRGYGPPRGRSRDKYGPPTRTEYRLI 111
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ + GVV++ + DMK AI KLDDTE
Sbjct: 112 VENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNE-GVVEFASYSDMKNAIDKLDDTEL 169
>gi|440907568|gb|ELR57702.1| Serine/arginine-rich splicing factor 4, partial [Bos grunniens
mutus]
Length = 488
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 102/176 (57%), Gaps = 17/176 (9%)
Query: 12 GNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNFD 71
G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G +
Sbjct: 1 GRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGKDLC 55
Query: 72 GCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVIVRG 131
G R+ VE A RGP R G YG +G +G +G ++G +EYR+IV
Sbjct: 56 GERVIVEHA-----RGPR---RDGSYG---SGRSGYGYRRSGRDKYGPPTRTEYRLIVEN 104
Query: 132 LPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
L S SWQDLKD+MR+AG+V +A+ + + GV+++ + DMK A+ KLD TE
Sbjct: 105 LSSRCSWQDLKDYMRQAGEVTYADAHKGRKNE-GVIEFVSYSDMKRALEKLDGTEV 159
>gi|345491212|ref|XP_001603815.2| PREDICTED: serine-arginine protein 55-like isoform 2 [Nasonia
vitripennis]
Length = 364
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 101/201 (50%), Gaps = 25/201 (12%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S ++VG L +RE ++E F KYGRI ++ +K + FVEF++ RDA+DA+
Sbjct: 1 MSTRVFVGGLTYRVRERDLEKFFRKYGRIKEVAMK-----NGFAFVEFDDYRDADDAVYE 55
Query: 65 RDGYNFDGCRLRVELAHGGSGRGPSS---SDRRGGYGGG---------------GAGGAG 106
+G G R+ VE A G+ RG D RGGYG
Sbjct: 56 LNGKELLGERITVERAR-GTPRGSDQWRYGDSRGGYGDSRRSARDDMRHDRDSVNRNTRT 114
Query: 107 GAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGV 166
+ R+G +EYR+ V L S SWQDLKD+MR+AG+V +A+ + GV
Sbjct: 115 TSSYKQSLPRYGPPTRTEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNE-GV 173
Query: 167 VDYTNPEDMKYAIRKLDDTEF 187
V++ D+K AI KLDDTE
Sbjct: 174 VEFATYSDLKNAIEKLDDTEL 194
>gi|328770953|gb|EGF80994.1| hypothetical protein BATDEDRAFT_36927 [Batrachochytrium
dendrobatidis JAM81]
Length = 246
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 100/194 (51%), Gaps = 46/194 (23%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPC---YCFVEFENARD 57
MS ++R +Y+G LP DI E EVE L ++GRI D+ C + FVE+ ++RD
Sbjct: 1 MSSGYTR-VYIGRLPRDITEREVERLAREFGRIRDVR--------CLNGFAFVEYSDSRD 51
Query: 58 AEDAIRGRDGYNFDGCRLRVELAHGGSGR---GPSSSDRRGGYGGGGAGGAGGAGAGAGA 114
A D +R DG +D RL V+ A GS R SSS RRG YG
Sbjct: 52 ARDCVRELDGSRYDRERLSVQPAKSGSDRRDRPASSSLRRGDYG---------------- 95
Query: 115 GRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPED 174
++V+GLP+ SWQDLKD RK GDV F + D+ G G+V++T+ D
Sbjct: 96 ------------IVVQGLPARTSWQDLKDLFRKVGDVIFTNI--DNSGD-GIVEFTSETD 140
Query: 175 MKYAIRKLDDTEFR 188
AI + D TEF+
Sbjct: 141 KNSAIEQFDKTEFQ 154
>gi|297263673|ref|XP_001089031.2| PREDICTED: splicing factor, arginine/serine-rich 9-like [Macaca
mulatta]
Length = 162
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/134 (47%), Positives = 80/134 (59%), Gaps = 24/134 (17%)
Query: 56 RDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAG 115
RDAEDAI GR+GY++ CRLRVE G G G
Sbjct: 4 RDAEDAIYGRNGYDYGQCRLRVEFPRTY---------------------GGRGGWPRGGR 42
Query: 116 RFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDM 175
+R S++RV+V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y EDM
Sbjct: 43 NGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDG---VGMVEYLRKEDM 99
Query: 176 KYAIRKLDDTEFRN 189
+YA+RKLDDT+FR+
Sbjct: 100 EYALRKLDDTKFRS 113
>gi|289739639|gb|ADD18567.1| arginine/serine-rich 6 splicing factor [Glossina morsitans
morsitans]
Length = 346
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/182 (41%), Positives = 101/182 (55%), Gaps = 10/182 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGA---GRFGISRHSEY 125
G R+ VE A G + RG + YGG GG + R+G +EY
Sbjct: 61 ELLGERVVVEPARG-TARGSNRDRYDDRYGGRRGGGGRYNDKNKNSRSSSRYGPPLRTEY 119
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
R+IV L S SWQDLKD+MR+AG+V +A+ + GVV++ + DMK AI KLDDT
Sbjct: 120 RLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNE-GVVEFASLSDMKTAIEKLDDT 178
Query: 186 EF 187
+
Sbjct: 179 DL 180
>gi|291224545|ref|XP_002732262.1| PREDICTED: splicing factor, arginine/serine-rich 4-like
[Saccoglossus kowalevskii]
Length = 274
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 110/214 (51%), Gaps = 27/214 (12%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YGR+ +I LK + FVEFE+ RD++DA+ +G
Sbjct: 30 VYIGRLSYQTRERDVERFFRGYGRLREINLK-----NGFGFVEFEDPRDSDDAVYELNGK 84
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRR-GGYGGGGA---------GGAGGAGAGAGAGRFG 118
G R+ +E A RGP D R GY G GG G G ++G
Sbjct: 85 ELCGERVTIEHA-----RGPVRRDYRDSGYSNRGGDRDSYRSDRGGFGPPRRRGGVDKYG 139
Query: 119 ISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYA 178
+E+R+IV L S SWQDLKD+MR+AG+V FA+ + + GVV+ + D+K
Sbjct: 140 PPTRTEHRLIVENLSSRCSWQDLKDYMRQAGEVTFADAHKQHKNE-GVVELASHSDLKNV 198
Query: 179 IRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRS 212
I KLD TE GR +K + P R RSRS
Sbjct: 199 IAKLDGTEI-----SGR-KIKLIEDRPKRHRSRS 226
>gi|156084620|ref|XP_001609793.1| splicing factor, arginine/serine-rich 3 [Babesia bovis T2Bo]
gi|154797045|gb|EDO06225.1| splicing factor, arginine/serine-rich 3, putative [Babesia bovis]
Length = 239
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 97/181 (53%), Gaps = 25/181 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNLP + ++ED F K+G+++ +LK + F+E+E+ARDA DAI+ RDG
Sbjct: 10 VYVGNLPESCTQKDIEDEFGKFGKLISCDLKKNAGGSTFAFLEYEDARDAHDAIKDRDGS 69
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++G RLRVE P S A G A G R Y V
Sbjct: 70 EYEGRRLRVET--------PFS--------------AKDDGRPARRRGPGAPRRGRYIVE 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP + SWQDLKDHMR+AG+ A+V R G G V + + DM+YAI K D + F+
Sbjct: 108 VSGLPPTGSWQDLKDHMREAGECAHADVFR---GGVGEVSFYSRSDMEYAIDKFDGSTFK 164
Query: 189 N 189
+
Sbjct: 165 S 165
>gi|355786589|gb|EHH66772.1| hypothetical protein EGM_03825, partial [Macaca fascicularis]
Length = 159
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/134 (47%), Positives = 80/134 (59%), Gaps = 24/134 (17%)
Query: 56 RDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAG 115
RDAEDAI GR+GY++ CRLRVE G G G
Sbjct: 1 RDAEDAIYGRNGYDYGQCRLRVEFPRTY---------------------GGRGGWPRGGR 39
Query: 116 RFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDM 175
+R S++RV+V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y EDM
Sbjct: 40 NGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDG---VGMVEYLRKEDM 96
Query: 176 KYAIRKLDDTEFRN 189
+YA+RKLDDT+FR+
Sbjct: 97 EYALRKLDDTKFRS 110
>gi|198432077|ref|XP_002131581.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 4
(Pre-mRNA-splicing factor SRP75) (SRP001LB) [Ciona
intestinalis]
Length = 332
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 104/194 (53%), Gaps = 16/194 (8%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGR I+VG L RE ++E F +GRI DI +K +CFVEF+++RDA+D
Sbjct: 1 MSGR---RIFVGRLSYRAREGDIERFFKGFGRITDINIK-----NGFCFVEFDDSRDADD 52
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGA-------GAGAG 113
A+ + G R+ VELA G G D GG G GG G G
Sbjct: 53 AVYEMNNQMLCGERVTVELAKGTQRWGQERRDYGGGRDYGRGDYGGGYGGRNNDRGFGRR 112
Query: 114 AGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPE 173
+F +EYRVIV L + +WQ+LKDH+R+AG++ +A+ + GVVD+ + +
Sbjct: 113 QSKFAPPMRTEYRVIVENLSTRVAWQELKDHLRQAGEITYADAHKHRRNE-GVVDFASYD 171
Query: 174 DMKYAIRKLDDTEF 187
DMK AI K ++TE
Sbjct: 172 DMKNAIEKFNNTEL 185
>gi|289740685|gb|ADD19090.1| serine-arginine protein 55 [Glossina morsitans morsitans]
Length = 351
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/182 (42%), Positives = 102/182 (56%), Gaps = 9/182 (4%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHG---GSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
G R+ VE A G GS R DR GG GGG + R+G +EY
Sbjct: 61 ELLGERVVVEPARGTARGSHRDRYGDDRYGGRRGGGGRYNDKNKNSRSSSRYGPPLRTEY 120
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
R+IV L S SWQDLKD+MR+AG+V +A+ + GVV++ + DMK AI KLDDT
Sbjct: 121 RLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNE-GVVEFASLSDMKTAIEKLDDT 179
Query: 186 EF 187
+
Sbjct: 180 DL 181
>gi|401397011|ref|XP_003879960.1| hypothetical protein NCLIV_004090 [Neospora caninum Liverpool]
gi|325114368|emb|CBZ49925.1| hypothetical protein NCLIV_004090 [Neospora caninum Liverpool]
Length = 378
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/148 (46%), Positives = 83/148 (56%), Gaps = 24/148 (16%)
Query: 46 CYCFVEFENARDAEDAIRGRDGYNFDGCRLRVELA-----HGGSGRGPSSSDRRGGYGGG 100
CY FVEFE R AEDA+ R GY + G LRVE GSG P++ G +GGG
Sbjct: 5 CYAFVEFETIRAAEDAVACRHGYLYRGRSLRVEFTAQPSRRAGSGVNPNTIPT-GSFGGG 63
Query: 101 GAGGAGGAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDS 160
AG R + +RV+V LP WQ LKDHMRKAG V FAEV S
Sbjct: 64 SAG---------------PPRRTGHRVLVSFLPPGCRWQHLKDHMRKAGPVGFAEVL--S 106
Query: 161 EGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
+G GVV+Y +PED++YA+R LD TE R
Sbjct: 107 QG-RGVVEYEHPEDLQYAVRSLDKTELR 133
>gi|298710995|emb|CBJ32302.1| arginine/serine-rich splicing factor 6 [Ectocarpus siliculosus]
Length = 235
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 97/187 (51%), Gaps = 33/187 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IY+G+L R+ +++ F +YGRI I++++ + F+EFE+ RDAEDA+ DG
Sbjct: 5 IYIGHLSPHTRDRDLDRAFGRYGRIEKIDVRM-----GFAFIEFEDRRDAEDAVAEMDGR 59
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
FDG R+ V+ G GP + RR +E+R+
Sbjct: 60 EFDGARIVVQPGRGHRPNGPKFATRR----------------------------TEHRIT 91
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GL S SWQDLKD R+AG V +++V +GVV+Y + +DMK AIR LDDT
Sbjct: 92 VEGLDSHTSWQDLKDFGRQAGQVLYSDVFFRQGRRWGVVEYVSRDDMKAAIRTLDDTRLG 151
Query: 189 NPWARGR 195
+ R R
Sbjct: 152 GKYIRVR 158
>gi|390462611|ref|XP_003732879.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 6-like [Callithrix jacchus]
Length = 344
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 103/179 (57%), Gaps = 11/179 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+++LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A RGP YG GG + +G ++G +EYR+I
Sbjct: 59 ELCGERVIVEHA-----RGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MR+AG+V +A+ ++ GV+++ + DMK A+ KLD TE
Sbjct: 114 VENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNE-GVIEFRSYSDMKRALDKLDGTEI 171
>gi|403290688|ref|XP_003936440.1| PREDICTED: serine/arginine-rich splicing factor 6 [Saimiri
boliviensis boliviensis]
Length = 344
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 103/179 (57%), Gaps = 11/179 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+++LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A RGP YG GG + +G ++G +EYR+I
Sbjct: 59 ELCGERVIVEHA-----RGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MR+AG+V +A+ ++ GV+++ + DMK A+ KLD TE
Sbjct: 114 VENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNE-GVIEFRSYSDMKRALDKLDGTEI 171
>gi|338727750|ref|XP_001488704.3| PREDICTED: serine/arginine-rich splicing factor 9 [Equus caballus]
Length = 289
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/133 (47%), Positives = 80/133 (60%), Gaps = 24/133 (18%)
Query: 57 DAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGR 116
DAEDAI GR+GY++ CRLRVE GR G G
Sbjct: 132 DAEDAIYGRNGYDYGQCRLRVEFPRTYGGR---------------------GGWPRGGRN 170
Query: 117 FGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMK 176
+R S++RV+V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y EDM+
Sbjct: 171 GPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDME 227
Query: 177 YAIRKLDDTEFRN 189
YA+RKLDDT+FR+
Sbjct: 228 YALRKLDDTKFRS 240
>gi|307189409|gb|EFN73819.1| Serine-arginine protein 55 [Camponotus floridanus]
Length = 387
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 98/197 (49%), Gaps = 25/197 (12%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP RE ++E F YGR D+ +K Y FVEF++ RDA+DA+ +G
Sbjct: 59 VYVGGLPYGTRERDLERFFRGYGRFRDVLIK-----NGYGFVEFDDYRDADDAVYELNGK 113
Query: 69 NFDGCRLRVELAHGGSGRGPSS---SDRRGGYGGG---------------GAGGAGGAGA 110
G R+ VE A G + RG D RGGYG +
Sbjct: 114 ELLGERITVERARG-TPRGSDQWRYGDSRGGYGDSRRSARDDMRHDRDSVNRNTRTASSY 172
Query: 111 GAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYT 170
R+G +EYR+ V L S SWQDLKD+MR+AG+V +A+ + GVV++
Sbjct: 173 KQSLPRYGPPTRTEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNE-GVVEFA 231
Query: 171 NPEDMKYAIRKLDDTEF 187
D+K AI KLDDTE
Sbjct: 232 TYSDLKNAIDKLDDTEL 248
>gi|440909520|gb|ELR59420.1| Serine/arginine-rich splicing factor 9, partial [Bos grunniens
mutus]
Length = 159
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/134 (46%), Positives = 80/134 (59%), Gaps = 24/134 (17%)
Query: 56 RDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAG 115
RDAEDAI GR+GY++ CRLRVE G G G
Sbjct: 1 RDAEDAIYGRNGYDYGQCRLRVEFPRTY---------------------GGRGGWPRGGR 39
Query: 116 RFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDM 175
+R S++RV+V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y EDM
Sbjct: 40 SGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDM 96
Query: 176 KYAIRKLDDTEFRN 189
+YA+RKLD+T+FR+
Sbjct: 97 EYALRKLDETKFRS 110
>gi|395505266|ref|XP_003756964.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 2
[Sarcophilus harrisii]
Length = 321
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 103/179 (57%), Gaps = 15/179 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L +RE +++ F YGR+L+++LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP R GY G + + G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGPRRD--RDGYSYGSRRYS--SRRATGRDKYGPPVRTEYRLI 109
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MR+AG+V +A+ ++ GV+++ + DMK A+ KLD TE
Sbjct: 110 VENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNE-GVIEFRSYSDMKRALDKLDGTEI 167
>gi|328786878|ref|XP_391860.4| PREDICTED: serine/arginine-rich splicing factor 4 [Apis mellifera]
Length = 419
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 98/197 (49%), Gaps = 25/197 (12%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP RE ++E F YGR D+ +K Y FVEF++ RDA+DA+ +G
Sbjct: 59 VYVGGLPYGTRERDLERFFRGYGRFRDVLIK-----NGYGFVEFDDYRDADDAVYELNGK 113
Query: 69 NFDGCRLRVELAHGGSGRGPSS---SDRRGGYGGG---------------GAGGAGGAGA 110
G R+ VE A G+ RG D RGGYG +
Sbjct: 114 ELLGERITVERAR-GTPRGSDQWRYGDSRGGYGDSRRSARDDMRHDRDSVNRNTRTASSY 172
Query: 111 GAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYT 170
R+G +EYR+ V L S SWQDLKD+MR+AG+V +A+ + GVV++
Sbjct: 173 KQSLPRYGPPTRTEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNE-GVVEFA 231
Query: 171 NPEDMKYAIRKLDDTEF 187
D+K AI KLDDTE
Sbjct: 232 TYSDLKNAIDKLDDTEL 248
>gi|225711268|gb|ACO11480.1| Serine-arginine protein 55 [Caligus rogercresseyi]
Length = 197
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 96/179 (53%), Gaps = 15/179 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LPSD+ EV ++F KY D+ LK + FVEF++ RDA+ A+ DG
Sbjct: 19 VYVGGLPSDVTTSEVGEIFAKYRNRFDVVLKTR-----FAFVEFDHNRDADHALERLDGT 73
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
F G R+ VE+A RGP ++D+ GG ++G ++Y++I
Sbjct: 74 LFRGQRIVVEIA-----RGPKTADKYLFRGGMDREPT----QATWVQKYGAPEITQYKLI 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
+R L + WQDLKD MRKAG V +A+V R++ G+V + N DM AI DD E
Sbjct: 125 IRNLSTRIEWQDLKDLMRKAGRVTYAQVHRNNLRE-GIVCFENKHDMLRAIDIFDDYEL 182
>gi|403281819|ref|XP_003932372.1| PREDICTED: serine/arginine-rich splicing factor 9 [Saimiri
boliviensis boliviensis]
Length = 155
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/134 (47%), Positives = 82/134 (61%), Gaps = 24/134 (17%)
Query: 56 RDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAG 115
+DAEDAI GR+GY++ CRLRVE P + G G G
Sbjct: 15 QDAEDAIYGRNGYDYGQCRLRVEF--------PRTY-------------GGRGGWPRGGR 53
Query: 116 RFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDM 175
+R S++RV+V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y EDM
Sbjct: 54 NGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDG---VGMVEYLRKEDM 110
Query: 176 KYAIRKLDDTEFRN 189
+YA+RKLDDT+FR+
Sbjct: 111 EYALRKLDDTKFRS 124
>gi|401412768|ref|XP_003885831.1| Function: human SRp75 can complement a splicing-deficient extract,
related [Neospora caninum Liverpool]
gi|325120251|emb|CBZ55805.1| Function: human SRp75 can complement a splicing-deficient extract,
related [Neospora caninum Liverpool]
Length = 353
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 100/199 (50%), Gaps = 27/199 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAI---RGR 65
IY+G+LP + E +VE F K+G+I+ +E K YCF+E+ + RDA DAI GR
Sbjct: 17 IYIGSLPGEYTEKDVEREFEKFGKIVKLEFKRTVSGAGYCFLEYADPRDARDAIAQLHGR 76
Query: 66 DGYNF-DGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
F D LRVE+ SGR SD A G GRF +
Sbjct: 77 PPPGFRDAAPLRVEIPLARSGRTDGFSD-----------DAMPRGLAGRRGRFVLE---- 121
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEG---TYGVVDYTNPEDMKYAIRK 181
VRGLP S SWQDLKDH R GDV FAEV +D + G V + + DM AI
Sbjct: 122 ----VRGLPPSGSWQDLKDHFRGIGDVGFAEVRKDPDAPDSVMGKVSFFSKRDMMEAIEA 177
Query: 182 LDDTEFR-NPWARGRITVK 199
LD + FR + + RITV+
Sbjct: 178 LDGSTFRSHEGEKSRITVR 196
>gi|357621499|gb|EHJ73311.1| splicing factor arginine/serine-rich 6 [Danaus plexippus]
Length = 408
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 95/179 (53%), Gaps = 11/179 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F +GRI DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPFGVRERDLEKFFKGFGRIRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A RG S R G + R+G +EYR+I
Sbjct: 61 ELLGERVVVEPA-----RGIDRSADRYRRDRYYERDRGRSRYDDYNYRYGPPTRTEYRLI 115
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ + GVV++ DM+ AI KLD TE
Sbjct: 116 VENLSSRISWQDLKDYMRQAGEVTYADAHKQHRNE-GVVEFATHSDMRAAIEKLDGTEL 173
>gi|343426008|emb|CBQ69540.1| related to pre-mrna splicing factor srp55 [Sporisorium reilianum
SRZ2]
Length = 248
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 102/191 (53%), Gaps = 16/191 (8%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +Y+G LP+D+R ++EDLF YGR+ D+ + + FVEFE+ RDAEDA++
Sbjct: 1 MSTRVYIGKLPADVRRGDIEDLFRDYGRLYDVRIM-----GSFGFVEFEHPRDAEDAVKD 55
Query: 65 RDGYNFDGCRLRVELAHGG-------SGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRF 117
DG NF G R+ V+ A G +G DRR GG + GA R
Sbjct: 56 FDGKNFMGERILVQHAKSGERRRAEPAGYASDPYDRR---GGARDAPSSRYGAPPPPRRE 112
Query: 118 GISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKY 177
R ++R ++ LP + SWQDLKD R+ G + FA+V ++ G ++Y N +D +
Sbjct: 113 PRLRRGQFRCVISNLPPNTSWQDLKDIGREHGSISFADVDPNNPDE-GFIEYDNRDDYER 171
Query: 178 AIRKLDDTEFR 188
A+ K++ E R
Sbjct: 172 ALDKIEGIELR 182
>gi|350408072|ref|XP_003488292.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Bombus impatiens]
Length = 394
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 98/197 (49%), Gaps = 25/197 (12%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP RE ++E F YGR D+ +K Y FVEF++ RDA+DA+ +G
Sbjct: 59 VYVGGLPYGTRERDLERFFRGYGRFRDVLIK-----NGYGFVEFDDYRDADDAVYELNGK 113
Query: 69 NFDGCRLRVELAHGGSGRGPSS---SDRRGGYGGG---------------GAGGAGGAGA 110
G R+ VE A G + RG D RGGYG +
Sbjct: 114 ELLGERITVERARG-TPRGSDQWRYGDSRGGYGDSRRSARDDMRHDRDSVNRNTRTASSY 172
Query: 111 GAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYT 170
R+G +EYR+ V L S SWQDLKD+MR+AG+V +A+ + GVV++
Sbjct: 173 KQSLPRYGPPTRTEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNE-GVVEFA 231
Query: 171 NPEDMKYAIRKLDDTEF 187
D+K AI KLDDTE
Sbjct: 232 TYSDLKNAIDKLDDTEL 248
>gi|383848642|ref|XP_003699957.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Megachile
rotundata]
Length = 418
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 98/197 (49%), Gaps = 25/197 (12%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP RE ++E F YGR D+ +K Y FVEF++ RDA+DA+ +G
Sbjct: 59 VYVGGLPYGTRERDLERFFRGYGRFRDVLIK-----NGYGFVEFDDYRDADDAVYELNGK 113
Query: 69 NFDGCRLRVELAHGGSGRGPSS---SDRRGGYGGG---------------GAGGAGGAGA 110
G R+ VE A G+ RG D RGGYG +
Sbjct: 114 ELLGERITVERAR-GTPRGSDQWRYGDSRGGYGDSRRSARDDMRHDRDSVNRNTRTASSY 172
Query: 111 GAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYT 170
R+G +EYR+IV L S SWQDLKD+MR AG+V +A+ + GVV++
Sbjct: 173 KQSLPRYGPPTRTEYRLIVENLSSRVSWQDLKDYMRHAGEVTYADAHKQRRNE-GVVEFA 231
Query: 171 NPEDMKYAIRKLDDTEF 187
D+K AI KLDDTE
Sbjct: 232 TYSDLKNAIDKLDDTEL 248
>gi|270015083|gb|EFA11531.1| hypothetical protein TcasGA2_TC016051 [Tribolium castaneum]
Length = 303
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 101/185 (54%), Gaps = 16/185 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VG L +RE ++E F KYGRI ++ +K + FVEF++ RDA+DA+ +G
Sbjct: 5 VFVGGLTYRVRERDIEKFFRKYGRIKEVAMK-----NGFAFVEFDDYRDADDAVYELNGK 59
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGA------GAGRFGISRH 122
G R+ VE A G P D+ G GG G G G R+G
Sbjct: 60 ELLGERVSVERARG----TPRGCDQWRGSGGRGYGPPRGRSRDNREPDMRSHDRYGPPTR 115
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKL 182
+EYR+IV L S SWQDLKD+MR+AG+V +A+ + GVV++ + DMK AI KL
Sbjct: 116 TEYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNE-GVVEFASYSDMKNAIDKL 174
Query: 183 DDTEF 187
DDTE
Sbjct: 175 DDTEL 179
>gi|74226809|dbj|BAE27050.1| unnamed protein product [Mus musculus]
Length = 339
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 102/179 (56%), Gaps = 11/179 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+I+LK Y FVEFE++RDA+DA+ +
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLKN-----GYGFVEFEDSRDADDAVYELNSK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A RGP YG GG + +G ++G +EYR+I
Sbjct: 59 ELCGERVIVEHA-----RGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MR+AG+V +A+ ++ GV+++ + DMK A+ KLD TE
Sbjct: 114 VENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNE-GVIEFRSYSDMKRALDKLDGTEI 171
>gi|350408075|ref|XP_003488293.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Bombus impatiens]
Length = 418
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 98/197 (49%), Gaps = 25/197 (12%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP RE ++E F YGR D+ +K Y FVEF++ RDA+DA+ +G
Sbjct: 59 VYVGGLPYGTRERDLERFFRGYGRFRDVLIK-----NGYGFVEFDDYRDADDAVYELNGK 113
Query: 69 NFDGCRLRVELAHGGSGRGPSS---SDRRGGYGGG---------------GAGGAGGAGA 110
G R+ VE A G+ RG D RGGYG +
Sbjct: 114 ELLGERITVERAR-GTPRGSDQWRYGDSRGGYGDSRRSARDDMRHDRDSVNRNTRTASSY 172
Query: 111 GAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYT 170
R+G +EYR+ V L S SWQDLKD+MR+AG+V +A+ + GVV++
Sbjct: 173 KQSLPRYGPPTRTEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNE-GVVEFA 231
Query: 171 NPEDMKYAIRKLDDTEF 187
D+K AI KLDDTE
Sbjct: 232 TYSDLKNAIDKLDDTEL 248
>gi|327283237|ref|XP_003226348.1| PREDICTED: serine/arginine-rich splicing factor 6-like [Anolis
carolinensis]
Length = 343
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 103/179 (57%), Gaps = 13/179 (7%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L +RE +++ F YGR+L+++LK Y FVEFE++RDAEDA+ +G
Sbjct: 4 VYIGRLSYHVREKDLQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDAEDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP R GY G + +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGPRRD--RDGYSYSSRSGGYSSRRTSGRDKYGPPVRTEYRLI 111
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MR+AG+V +A+ ++ GV+++ + DMK A+ KLD TE
Sbjct: 112 VENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNE-GVIEFRSYSDMKRALDKLDGTEI 169
>gi|112982956|ref|NP_001037676.1| splicing factor arginine/serine-rich 6 [Bombyx mori]
gi|109706819|gb|ABG42996.1| splicing factor arginine/serine-rich 6 [Bombyx mori]
Length = 306
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/181 (40%), Positives = 99/181 (54%), Gaps = 18/181 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F +GRI DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPFGVRERDLEKFFKGFGRIRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDR--RGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G R+ VE A G S+DR RG +GG G +G +EYR
Sbjct: 61 ELLGERVVVEPARGID----RSADRYRRGDRHYERSGG------GRSRYEYGPPTRTEYR 110
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTE 186
+IV + S SWQDLKD+MR+AG+V +A+ + GVV++ DM+ AI KLD TE
Sbjct: 111 LIVENVSSRISWQDLKDYMRQAGEVTYADAHKQHRNE-GVVEFATHSDMRAAIEKLDGTE 169
Query: 187 F 187
Sbjct: 170 L 170
>gi|355564745|gb|EHH21245.1| hypothetical protein EGK_04262, partial [Macaca mulatta]
Length = 159
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/134 (46%), Positives = 79/134 (58%), Gaps = 24/134 (17%)
Query: 56 RDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAG 115
RDAEDAI GR+GY++ C LRVE G G G
Sbjct: 1 RDAEDAIYGRNGYDYGQCWLRVEFPRTY---------------------GGRGGWPRGGR 39
Query: 116 RFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDM 175
+R S++RV+V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y EDM
Sbjct: 40 NGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDG---VGMVEYLRKEDM 96
Query: 176 KYAIRKLDDTEFRN 189
+YA+RKLDDT+FR+
Sbjct: 97 EYALRKLDDTKFRS 110
>gi|395505264|ref|XP_003756963.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1
[Sarcophilus harrisii]
Length = 340
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 103/179 (57%), Gaps = 11/179 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L +RE +++ F YGR+L+++LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP YG G GG + G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGPRRDRDGYSYGSRGGGGGYSSRRATGRDKYGPPVRTEYRLI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MR+AG+V +A+ ++ GV+++ + DMK A+ KLD TE
Sbjct: 114 VENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNE-GVIEFRSYSDMKRALDKLDGTEI 171
>gi|20127499|ref|NP_006266.2| serine/arginine-rich splicing factor 6 [Homo sapiens]
gi|307078161|ref|NP_001182497.1| splicing factor, arginine/serine-rich 6 [Pongo abelii]
gi|332209067|ref|XP_003253632.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1
[Nomascus leucogenys]
gi|397511164|ref|XP_003825949.1| PREDICTED: serine/arginine-rich splicing factor 6 [Pan paniscus]
gi|426391709|ref|XP_004062210.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1
[Gorilla gorilla gorilla]
gi|20981728|sp|Q13247.2|SRSF6_HUMAN RecName: Full=Serine/arginine-rich splicing factor 6; AltName:
Full=Pre-mRNA-splicing factor SRP55; AltName:
Full=Splicing factor, arginine/serine-rich 6
gi|13905094|gb|AAH06832.1| Splicing factor, arginine/serine-rich 6 [Homo sapiens]
gi|119596370|gb|EAW75964.1| splicing factor, arginine/serine-rich 6, isoform CRA_a [Homo
sapiens]
gi|119596373|gb|EAW75967.1| splicing factor, arginine/serine-rich 6, isoform CRA_a [Homo
sapiens]
Length = 344
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 103/179 (57%), Gaps = 11/179 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+++LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A RGP YG GG + +G ++G +EYR+I
Sbjct: 59 ELCGERVIVEHA-----RGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MR+AG+V +A+ ++ GV+++ + DMK A+ KLD TE
Sbjct: 114 VENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNE-GVIEFRSYSDMKRALDKLDGTEI 171
>gi|30584231|gb|AAP36364.1| Homo sapiens splicing factor, arginine/serine-rich 6 [synthetic
construct]
gi|61371415|gb|AAX43663.1| splicing factor arginine/serine-rich 6 [synthetic construct]
gi|61371422|gb|AAX43664.1| splicing factor arginine/serine-rich 6 [synthetic construct]
Length = 345
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 103/179 (57%), Gaps = 11/179 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+++LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A RGP YG GG + +G ++G +EYR+I
Sbjct: 59 ELCGERVIVEHA-----RGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MR+AG+V +A+ ++ GV+++ + DMK A+ KLD TE
Sbjct: 114 VENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNE-GVIEFRSYSDMKRALDKLDGTEI 171
>gi|62087532|dbj|BAD92213.1| arginine/serine-rich splicing factor 6 variant [Homo sapiens]
Length = 279
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 103/179 (57%), Gaps = 11/179 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+++LK Y FVEFE++RDA+DA+ +G
Sbjct: 38 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 92
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A RGP YG GG + +G ++G +EYR+I
Sbjct: 93 ELCGERVIVEHA-----RGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLI 147
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MR+AG+V +A+ ++ GV+++ + DMK A+ KLD TE
Sbjct: 148 VENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNE-GVIEFRSYSDMKRALDKLDGTEI 205
>gi|348563835|ref|XP_003467712.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 6-like [Cavia porcellus]
Length = 341
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 103/179 (57%), Gaps = 11/179 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+++LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A RGP YG GG + +G ++G +EYR+I
Sbjct: 59 ELCGERVIVEHA-----RGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MR+AG+V +A+ ++ GV+++ + DMK A+ KLD TE
Sbjct: 114 VENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNE-GVIEFRSYSDMKRALDKLDGTEI 171
>gi|158255842|dbj|BAF83892.1| unnamed protein product [Homo sapiens]
Length = 344
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 103/179 (57%), Gaps = 11/179 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+++LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A RGP YG GG + +G ++G +EYR+I
Sbjct: 59 ELCGERVIVEHA-----RGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MR+AG+V +A+ ++ GV+++ + DMK A+ KLD TE
Sbjct: 114 VENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNE-GVIEFRSYSDMKRALDKLDGTEI 171
>gi|427777529|gb|JAA54216.1| Putative alternative splicing factor asf/sf2 [Rhipicephalus
pulchellus]
Length = 308
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 94/179 (52%), Gaps = 26/179 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VG L D+RE ++E F YGRI DI LK + FV+ + RDAEDA+R +G
Sbjct: 5 VFVGRLNYDVRERDLERFFRGYGRIEDIVLK-----NGFGFVDISDYRDAEDAVRDLNGK 59
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VELA G RGP DR G RFG + Y+++
Sbjct: 60 RLMGERVTVELARGMR-RGPPDYDR-------------------GPRRFGPPTRTNYQLL 99
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L +S SWQDLKD MR+AGDV + + + GVV++ + DMK A+R LD+
Sbjct: 100 VENLSTSVSWQDLKDFMRQAGDVTYTDAHKLRRHQ-GVVEFASYSDMKNALRSLDNVSL 157
>gi|402882500|ref|XP_003904778.1| PREDICTED: serine/arginine-rich splicing factor 6 [Papio anubis]
gi|380815566|gb|AFE79657.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|380815568|gb|AFE79658.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|383420733|gb|AFH33580.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|383420735|gb|AFH33581.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|384948770|gb|AFI37990.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|384948772|gb|AFI37991.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
Length = 343
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 103/179 (57%), Gaps = 11/179 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+++LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A RGP YG GG + +G ++G +EYR+I
Sbjct: 59 ELCGERVIVEHA-----RGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MR+AG+V +A+ ++ GV+++ + DMK A+ KLD TE
Sbjct: 114 VENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNE-GVIEFRSYSDMKRALDKLDGTEI 171
>gi|410215040|gb|JAA04739.1| serine/arginine-rich splicing factor 6 [Pan troglodytes]
gi|410302392|gb|JAA29796.1| serine/arginine-rich splicing factor 6 [Pan troglodytes]
gi|410360346|gb|JAA44682.1| serine/arginine-rich splicing factor 6 [Pan troglodytes]
Length = 344
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 103/179 (57%), Gaps = 11/179 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+++LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A RGP YG GG + +G ++G +EYR+I
Sbjct: 59 ELCGERVIVEHA-----RGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MR+AG+V +A+ ++ GV+++ + DMK A+ KLD TE
Sbjct: 114 VENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNE-GVIEFRSYSDMKRALDKLDGTEI 171
>gi|126291113|ref|XP_001371339.1| PREDICTED: serine/arginine-rich splicing factor 6-like [Monodelphis
domestica]
Length = 340
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 103/179 (57%), Gaps = 11/179 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L +RE +++ F YGR+L+++LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP YG G GG + G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGPRRDRDGYSYGSRGGGGGYSSRRATGRDKYGPPVRTEYRLI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MR+AG+V +A+ ++ GV+++ + DMK A+ KLD TE
Sbjct: 114 VENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNE-GVIEFRSYSDMKRALDKLDGTEI 171
>gi|156356000|ref|XP_001623720.1| predicted protein [Nematostella vectensis]
gi|156210446|gb|EDO31620.1| predicted protein [Nematostella vectensis]
Length = 188
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 107/212 (50%), Gaps = 24/212 (11%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSG+ +Y G LP+ E ++E+L +G++ +++ K Y +V F+ +DA+
Sbjct: 1 MSGK----VYCGRLPATATEKDLENLVKVFGKVREVDFK-----EGYAYVVFKENKDADR 51
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
A+ + F G ++ +E A + R G GG A G G A + G
Sbjct: 52 AVAALNNSEFHGAKILMEKA----------KEMRNGVGGYTAAG----GYTARTRQMGPP 97
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
SE+RVIV L + A W +LK+ M AG+VC+A+ R G GVV++T EDMK AI
Sbjct: 98 VRSEFRVIVENLSTRAKWLELKEFMNNAGEVCYADTHRRRPGE-GVVEFTTEEDMKRAIA 156
Query: 181 KLDDTEFRNPWARGRITVKRYDRSPSRSRSRS 212
LD EF R R + R S SRSRS S
Sbjct: 157 SLDKCEFYGKRIRLRQELPRSGTSKSRSRSPS 188
>gi|359322750|ref|XP_003639908.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1 [Canis
lupus familiaris]
Length = 344
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 103/179 (57%), Gaps = 11/179 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+I+LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A RGP YG GG + +G ++G +E+R+I
Sbjct: 59 ELCGERVIVEHA-----RGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEFRLI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MR+AG+V +A+ ++ GV+++ + DMK A+ KLD TE
Sbjct: 114 VENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNE-GVIEFRSYSDMKRALDKLDGTEI 171
>gi|116175261|ref|NP_001070685.1| serine/arginine-rich splicing factor 6 [Sus scrofa]
gi|115371751|gb|ABI96200.1| SFRS6 [Sus scrofa]
Length = 345
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 103/179 (57%), Gaps = 11/179 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+I+LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A RGP YG GG + +G ++G +E+R+I
Sbjct: 59 ELCGERVIVEHA-----RGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEFRLI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MR+AG+V +A+ ++ GV+++ + DMK A+ KLD TE
Sbjct: 114 VENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNE-GVIEFRSYSDMKRALDKLDGTEI 171
>gi|431894401|gb|ELK04201.1| Splicing factor, arginine/serine-rich 6 [Pteropus alecto]
Length = 343
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 103/179 (57%), Gaps = 11/179 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L +RE +++ F YGR+L+I+LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP YG GG + +G ++G +E+R+I
Sbjct: 59 DLCGERVIVEHA-----RGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEFRLI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MR+AG+V +A+ ++ GV+++ + DMK A+ KLD TE
Sbjct: 114 VENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNE-GVIEFRSYSDMKRALDKLDGTEI 171
>gi|403224084|dbj|BAM42214.1| splicing factor [Theileria orientalis strain Shintoku]
Length = 259
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 96/181 (53%), Gaps = 27/181 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IY+GNLPSD + E+E+ F K+GRIL +LK + F+EF ++RDA DAIR +DG+
Sbjct: 9 IYIGNLPSDCSQKELEEEFEKFGRILYCDLKRSYTGSSFAFIEFSDSRDARDAIRDKDGF 68
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
F G +LRVEL + S R G R +Y +
Sbjct: 69 EFHGKKLRVELPFRERDQASGGSRRHG------------------------PRRGKYVLE 104
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V GLP S SWQDLKDHMR AG A+V R G G + + + DM+YAI K D + F+
Sbjct: 105 VTGLPPSGSWQDLKDHMRDAGHCGHADVFR---GGVGEISFFSRSDMEYAIEKYDGSTFK 161
Query: 189 N 189
+
Sbjct: 162 S 162
>gi|296481070|tpg|DAA23185.1| TPA: splicing factor, arginine/serine-rich 6 [Bos taurus]
Length = 345
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 103/179 (57%), Gaps = 11/179 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+I+LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A RGP YG GG + +G ++G +E+R+I
Sbjct: 59 ELCGERVIVEHA-----RGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEFRLI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MR+AG+V +A+ ++ GV+++ + DMK A+ KLD TE
Sbjct: 114 VENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNE-GVIEFRSYSDMKRALDKLDGTEI 171
>gi|395829006|ref|XP_003787652.1| PREDICTED: serine/arginine-rich splicing factor 6 [Otolemur
garnettii]
Length = 345
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 103/179 (57%), Gaps = 11/179 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+++LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A RGP YG GG + +G ++G +EYR+I
Sbjct: 59 ELCGERVIVEHA-----RGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MR+AG+V +A+ ++ GV+++ + DMK A+ +LD TE
Sbjct: 114 VENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNE-GVIEFRSYSDMKRALDRLDGTEI 171
>gi|56270156|gb|AAH87121.1| Splicing factor, arginine/serine-rich 6 [Rattus norvegicus]
Length = 339
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 102/179 (56%), Gaps = 11/179 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+I+LK Y FVEFE++RDA+DA+ +
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNSK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A RGP YG GG + +G ++G +EYR+I
Sbjct: 59 ELCGERVIVEHA-----RGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MR+AG+V +A+ ++ GV+++ + DMK A+ KLD TE
Sbjct: 114 VENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNE-GVIEFRSYSDMKRALDKLDGTEI 171
>gi|241574282|ref|XP_002403075.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
gi|215502148|gb|EEC11642.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
Length = 364
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 95/179 (53%), Gaps = 19/179 (10%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L D+RE ++E F +GRI +I +K + FVEF++ RDA+DA+ +G
Sbjct: 5 VYVGRLNYDVRERDLERFFKGFGRIREISIKN-----GFGFVEFDDPRDADDAVYELNGK 59
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VELA RG G + R+G +EY++
Sbjct: 60 DLMGDRVSVELA-------------RGIRRGADYYRSRSTAPSPPRRRYGPPTRTEYQLT 106
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ + GVV++ DMK A+ KLD+T+
Sbjct: 107 VENLSSRVSWQDLKDYMRQAGEVTYADAHKLRRNE-GVVEFATYSDMKNALDKLDNTDL 164
>gi|224967104|ref|NP_080775.3| arginine/serine-rich splicing factor 6 [Mus musculus]
gi|306922366|ref|NP_001014207.2| splicing factor, arginine/serine-rich 6 [Rattus norvegicus]
gi|74197209|dbj|BAE35148.1| unnamed protein product [Mus musculus]
gi|74228832|dbj|BAE21902.1| unnamed protein product [Mus musculus]
gi|148674361|gb|EDL06308.1| splicing factor, arginine/serine-rich 6 [Mus musculus]
gi|149043026|gb|EDL96600.1| similar to dJ862K6.2.2 (splicing factor, arginine/serine-rich 6
(SRP55-2)(isoform 2)), isoform CRA_a [Rattus norvegicus]
Length = 339
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 102/179 (56%), Gaps = 11/179 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+I+LK Y FVEFE++RDA+DA+ +
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNSK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A RGP YG GG + +G ++G +EYR+I
Sbjct: 59 ELCGERVIVEHA-----RGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MR+AG+V +A+ ++ GV+++ + DMK A+ KLD TE
Sbjct: 114 VENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNE-GVIEFRSYSDMKRALDKLDGTEI 171
>gi|12836310|dbj|BAB23599.1| unnamed protein product [Mus musculus]
Length = 339
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 102/179 (56%), Gaps = 11/179 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+I+LK Y FVEFE++RDA+DA+ +
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNSK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A RGP YG GG + +G ++G +EYR+I
Sbjct: 59 ELCGERVIVEHA-----RGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MR+AG+V +A+ ++ GV+++ + DMK A+ KLD TE
Sbjct: 114 VENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNE-GVIEFRSYSDMKRALDKLDGTEI 171
>gi|15080592|gb|AAH12039.1| Splicing factor, arginine/serine-rich 6 [Mus musculus]
Length = 339
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 102/179 (56%), Gaps = 11/179 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+I+LK Y FVEFE++RDA+DA+ +
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNSK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A RGP YG GG + +G ++G +EYR+I
Sbjct: 59 ELCGERVIVEHA-----RGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MR+AG+V +A+ ++ GV+++ + DMK A+ KLD TE
Sbjct: 114 VENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNE-GVIEFRSYSDMKRALDKLDGTEI 171
>gi|340378226|ref|XP_003387629.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Amphimedon
queenslandica]
Length = 309
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 101/184 (54%), Gaps = 10/184 (5%)
Query: 4 RFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIR 63
R+SR IY+G LP RE +VE F +GRI DI LK + FVEF++ RDAEDA+
Sbjct: 3 RYSR-IYIGRLPYQAREKDVERFFRGFGRIRDINLK-----NGFGFVEFDDYRDAEDAVY 56
Query: 64 GRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHS 123
G G R+ VE A G R R GG G G + A ++G +
Sbjct: 57 ELHGRELLGERVIVEHARGNRDRDDYRDRRGGGRDFRQDRGRDGR---SNASKYGPPLRT 113
Query: 124 EYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLD 183
++R++V + S SWQDLKD MR AG++ +A+ + G G+V+Y EDMK AIRKL+
Sbjct: 114 DFRILVENVSSRVSWQDLKDFMRTAGEITYADAHKQKTGE-GIVEYATYEDMKNAIRKLN 172
Query: 184 DTEF 187
T+
Sbjct: 173 GTDL 176
>gi|242011682|ref|XP_002426576.1| Splicing factor, arginine/serine-rich, putative [Pediculus humanus
corporis]
gi|212510716|gb|EEB13838.1| Splicing factor, arginine/serine-rich, putative [Pediculus humanus
corporis]
Length = 176
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/128 (50%), Positives = 81/128 (63%), Gaps = 13/128 (10%)
Query: 62 IRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISR 121
+ RDGY++DG RLRVE GG GP S G G G R +R
Sbjct: 1 VHARDGYDYDGYRLRVEFPRGG---GPGSYRGN-------RSGGSSGGDRGGGRRGPPAR 50
Query: 122 HSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRK 181
S++RV+V GLP S SWQDLKDHMR+AGDVCFA+V +D GT GVV++ EDMKYA++K
Sbjct: 51 RSQFRVLVTGLPPSGSWQDLKDHMREAGDVCFADVFKD--GT-GVVEFLRLEDMKYAVKK 107
Query: 182 LDDTEFRN 189
LDD+ FR+
Sbjct: 108 LDDSRFRS 115
>gi|91091338|ref|XP_966697.1| PREDICTED: similar to hnRNP protein [Tribolium castaneum]
Length = 282
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 95/182 (52%), Gaps = 27/182 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP E ++E F YGR+ D+ +K Y FVEF++ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGTTERDLERFFRGYGRMRDVLIK-----NGYGFVEFDDHRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHG---GSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
G R+ VE A G G + S SD R R+G + Y
Sbjct: 61 KLLGERVTVERARGTPRGRDQWSSRSDHR------------------SHERYGPPTRTNY 102
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
R+IV L S SWQDLKD+MR+AG+V +A+ + GVV++ + D+K AI KLDDT
Sbjct: 103 RLIVENLSSRISWQDLKDYMRQAGEVTYADAHKQHRNE-GVVEFASYSDLKNAIEKLDDT 161
Query: 186 EF 187
E
Sbjct: 162 EL 163
>gi|442754133|gb|JAA69226.1| Putative alternative splicing factor srp55/b52/srp75 rrm
superfamily [Ixodes ricinus]
Length = 363
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 95/179 (53%), Gaps = 19/179 (10%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L D+RE ++E F +GRI +I +K + FVEF++ RDA+DA+ +G
Sbjct: 5 VYVGRLNYDVRERDLERFFKGFGRIREISIKN-----GFGFVEFDDPRDADDAVYELNGK 59
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VELA RG G + R+G +EY++
Sbjct: 60 DLMGDRVSVELA-------------RGIRRGADYYRSRSTAPSPPRRRYGPPTRTEYQLT 106
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ + GVV++ DMK A+ KLD+T+
Sbjct: 107 VENLSSRVSWQDLKDYMRQAGEVTYADAHKLRRNE-GVVEFATYSDMKNALDKLDNTDL 164
>gi|348510431|ref|XP_003442749.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Oreochromis
niloticus]
Length = 342
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 101/179 (56%), Gaps = 12/179 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L +RE +++ F YG++L+I+LK Y FVEFE+ RDA+DA+ +G
Sbjct: 4 VYVGKLSYHVREKDIQRFFSGYGKLLEIDLK-----NGYGFVEFEDMRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ +E A RGP D G G G GG + G ++G +E+R+I
Sbjct: 59 ELCGERVVIEHA-----RGPRR-DGYGYGGHQGDGGGYSSWNRTGRDKYGPPVRTEHRLI 112
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MR+AG+V +A+ + GV+++ + DMK A+ KLD T+
Sbjct: 113 VENLSSRCSWQDLKDFMRQAGEVTYADAHK-GRANEGVIEFRSRSDMKRALEKLDGTDI 170
>gi|1049088|gb|AAA93073.1| SRp55-1 [Homo sapiens]
Length = 344
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 102/179 (56%), Gaps = 11/179 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+++LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G + VE A RGP YG GG + +G ++G +EYR+I
Sbjct: 59 ELCGEHVIVEHA-----RGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MR+AG+V +A+ ++ GV+++ + DMK A+ KLD TE
Sbjct: 114 VENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNE-GVIEFRSYSDMKRALDKLDGTEI 171
>gi|355557751|gb|EHH14531.1| hypothetical protein EGK_00474, partial [Macaca mulatta]
Length = 477
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 97/165 (58%), Gaps = 17/165 (10%)
Query: 23 VEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHG 82
VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G + G R+ VE A
Sbjct: 1 VERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHA-- 53
Query: 83 GSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLK 142
RGP R G YG +G +G +G ++G +EYR+IV L S SWQDLK
Sbjct: 54 ---RGPR---RDGSYG---SGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLK 104
Query: 143 DHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
D+MR+AG+V +A+ + + GV+++ + DMK A+ KLD TE
Sbjct: 105 DYMRQAGEVTYADAHKGRKNE-GVIEFVSYSDMKRALEKLDGTEV 148
>gi|417399301|gb|JAA46673.1| Putative serine/arginine-rich splicing factor 6 [Desmodus rotundus]
Length = 345
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 103/179 (57%), Gaps = 11/179 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L +RE +++ F YGR+L+I+LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP YG GG + +G ++G +E+R+I
Sbjct: 59 DLCGERVIVEHA-----RGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEFRLI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MR+AG+V +A+ ++ GV+++ + DMK A+ KLD TE
Sbjct: 114 VENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNE-GVIEFRSYSDMKRALDKLDGTEI 171
>gi|449486099|ref|XP_002195735.2| PREDICTED: serine/arginine-rich splicing factor 6 [Taeniopygia
guttata]
Length = 348
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 103/180 (57%), Gaps = 12/180 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L +RE +++ F YGR+L+++LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGP-SSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRV 127
+ G R+ VE A RGP D G GG + +G ++G +E+R+
Sbjct: 59 DLCGERVIVEHA-----RGPRRDRDGYSYSSRSGGGGGYSSRRQSGRDKYGPPVRTEFRL 113
Query: 128 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
IV L S SWQDLKD MR+AG+V +A+ ++ GV+++ + DMK A+ KLD TE
Sbjct: 114 IVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNE-GVIEFRSYSDMKRALDKLDGTEI 172
>gi|1049086|gb|AAA93072.1| SRp55-3, partial [Homo sapiens]
Length = 335
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 102/179 (56%), Gaps = 11/179 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+++LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G + VE A RGP YG GG + +G ++G +EYR+I
Sbjct: 59 ELCGEHVIVEHA-----RGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MR+AG+V +A+ ++ GV+++ + DMK A+ KLD TE
Sbjct: 114 VENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNE-GVIEFRSYSDMKRALDKLDGTEI 171
>gi|384494440|gb|EIE84931.1| hypothetical protein RO3G_09641 [Rhizopus delemar RA 99-880]
Length = 252
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 97/186 (52%), Gaps = 36/186 (19%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +Y+G L D + ++E LF YG I +I LK + FVEF + RDA+D +
Sbjct: 1 MSTRVYIGRLARDASKRDIERLFKNYGDIREINLKT-----GFGFVEFADERDAKDVVYD 55
Query: 65 RDGYNFDGCRLRVELAHGG---SGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISR 121
G +F G RL VE+A G R P +DR SR
Sbjct: 56 FHGKSFLGERLIVEIAKGTRRHDERRPRGNDR--------------------------SR 89
Query: 122 HSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRK 181
S YR+IV + +WQDLKD MRKAG+V FA++SRD + G+V++ +DM+YA++K
Sbjct: 90 -SHYRLIVENIAPGTNWQDLKDMMRKAGEVTFADISRD-RPSEGIVEFHVRDDMEYALKK 147
Query: 182 LDDTEF 187
L+D E
Sbjct: 148 LNDREL 153
>gi|328714675|ref|XP_003245425.1| PREDICTED: serine-arginine protein 55-like isoform 2 [Acyrthosiphon
pisum]
Length = 309
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 99/182 (54%), Gaps = 10/182 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IY+G+LP +RE +V+ F +GRI +I LK Y F+EF++ RDA+DA+ +G
Sbjct: 7 IYIGHLPYGVRERDVKKFFKGFGRIKEILLK-----NGYGFIEFDDYRDADDAVYELNGR 61
Query: 69 NFDGCRLRVELAHGGSGRGPS---SSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
+G R+ VE A G+ RG S R G R+G + Y
Sbjct: 62 ELNGERVSVERAR-GTPRGSDVWRGSGRGGDLPPPPPRRPRRDARDDRNDRYGPPTRTNY 120
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
R+IV L S SWQDLKD MR+AG+V +A+ + + GVV++ + D+K A+ KLDDT
Sbjct: 121 RLIVENLSSRVSWQDLKDFMRQAGEVTYADAHKQRKNE-GVVEFASYSDLKTALDKLDDT 179
Query: 186 EF 187
E
Sbjct: 180 EL 181
>gi|119614896|gb|EAW94490.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_e [Homo sapiens]
Length = 142
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/133 (51%), Positives = 78/133 (58%), Gaps = 13/133 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG G SR SE RV+
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGG-------------GGGGGGAPRGRYGPPSRRSENRVV 124
Query: 129 VRGLPSSASWQDL 141
V GLP S SWQDL
Sbjct: 125 VSGLPPSGSWQDL 137
>gi|294890805|ref|XP_002773323.1| arginine/serine-rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239878375|gb|EER05139.1| arginine/serine-rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 317
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/196 (40%), Positives = 106/196 (54%), Gaps = 21/196 (10%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELK------IPPRPPCYCFVEFENARDAEDAI 62
I V N+PS +RE E++D+FYK+GRI IE++ R Y +V+F + +DA DA
Sbjct: 4 IVVSNIPSTLRERELDDIFYKFGRIESIEIRGARINESSRRRTAYAYVQFRDWQDAADAA 63
Query: 63 RGRDGYNFDGCRLRVELAHGGSGRGPSSS---------DRRGGYGGGGAGGAGGAGAGAG 113
+ R+GY DG + VE+ G R S S R G GGG G G AG
Sbjct: 64 KSRNGYEIDGQPITVEV--DGDYRDDSRSIPSKGKGKGGGRYGDYGGGYGKGGSGSPSAG 121
Query: 114 AGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPE 173
G+S YRV+V LP ASWQDLKD MR AG+ F EV+RD G G +
Sbjct: 122 YDSMGMS-EKYYRVVVTNLPRGASWQDLKDKMRDAGECRFTEVTRDGVGVAG---FAGQS 177
Query: 174 DMKYAIRKLDDTEFRN 189
D++ A+R LDDTE ++
Sbjct: 178 DVERAVRTLDDTEMKS 193
>gi|432936464|ref|XP_004082128.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Oryzias latipes]
Length = 289
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 97/182 (53%), Gaps = 19/182 (10%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI +I LK + FVEF++ RDA+DA+ Y
Sbjct: 23 VFIGRLSPQARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAV-----Y 72
Query: 69 NFDGCRL---RVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
+G L RV + H S RG GGG + G+ R+G +E+
Sbjct: 73 ELNGKELLSERVTIEHARSRRGRGGGPPGMARFGGGYRQSRNTGS-----RYGPPVRTEH 127
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
R+IV L S SWQDLKD MRKAG+V F + R ++ GVV++ + D+K AI KLD T
Sbjct: 128 RLIVENLSSRISWQDLKDLMRKAGEVTFVDAHRPTKNE-GVVEFASRSDLKNAISKLDGT 186
Query: 186 EF 187
E
Sbjct: 187 EL 188
>gi|78369222|ref|NP_001030349.1| serine/arginine-rich splicing factor 6 [Bos taurus]
gi|122145041|sp|Q3B7L6.1|SRSF6_BOVIN RecName: Full=Serine/arginine-rich splicing factor 6; AltName:
Full=Splicing factor, arginine/serine-rich 6
gi|77567850|gb|AAI07554.1| Splicing factor, arginine/serine-rich 6 [Bos taurus]
Length = 345
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 102/179 (56%), Gaps = 11/179 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L I+LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLGIDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A RGP YG GG + +G ++G +E+R+I
Sbjct: 59 ELCGERVIVEHA-----RGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEFRLI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MR+AG+V +A+ ++ GV+++ + DMK A+ KLD TE
Sbjct: 114 VENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNE-GVIEFRSYSDMKRALDKLDGTEI 171
>gi|432936462|ref|XP_004082127.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Oryzias latipes]
Length = 272
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 97/182 (53%), Gaps = 19/182 (10%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI +I LK + FVEF++ RDA+DA+ Y
Sbjct: 6 VFIGRLSPQARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAV-----Y 55
Query: 69 NFDGCRL---RVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
+G L RV + H S RG GGG + G+ R+G +E+
Sbjct: 56 ELNGKELLSERVTIEHARSRRGRGGGPPGMARFGGGYRQSRNTGS-----RYGPPVRTEH 110
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
R+IV L S SWQDLKD MRKAG+V F + R ++ GVV++ + D+K AI KLD T
Sbjct: 111 RLIVENLSSRISWQDLKDLMRKAGEVTFVDAHRPTKNE-GVVEFASRSDLKNAISKLDGT 169
Query: 186 EF 187
E
Sbjct: 170 EL 171
>gi|403166701|ref|XP_003326577.2| hypothetical protein PGTG_07555 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375166678|gb|EFP82158.2| hypothetical protein PGTG_07555 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 258
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 96/182 (52%), Gaps = 31/182 (17%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R IYVG +P D +VE F +YG ++D+ + + F+E+++ RDAEDA+ +
Sbjct: 6 RRIYVGRIPPDASRTDVEKYFGRYGTLMDVRIM-----AGFGFLEYDSVRDAEDAVHDLN 60
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G +F G RL VE A GR S GG+G R +R
Sbjct: 61 GRDFMGERLIVEFAKAPRGRDIHS----GGHG---------------------PRRGGFR 95
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTE 186
++V+GL SWQDLKD R+AG+V A+V R+ G G++++ + +D AIRKLD TE
Sbjct: 96 LLVKGLSHETSWQDLKDFARQAGNVTRADVDRNMPGE-GLIEFASQDDADNAIRKLDGTE 154
Query: 187 FR 188
+
Sbjct: 155 LK 156
>gi|198421232|ref|XP_002126906.1| PREDICTED: similar to splicing factor, arginine/serine-rich 4
isoform 1 [Ciona intestinalis]
Length = 272
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 100/179 (55%), Gaps = 17/179 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+I D+ LK + FV F++ RDA+DAI +G
Sbjct: 7 VYIGRLSHRARENDVEHFFRGYGKINDLMLK-----NGFGFVIFDDERDADDAIHDLNGK 61
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ +E+A G + RGP GG + + + GI H YR+I
Sbjct: 62 SLCGERVMLEIAKG-TPRGP---------GGESSSSSYYQQQQPRSSTKGIPNHG-YRLI 110
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S +WQDLKD+MR+ G+V +A+ +R GVV++++ ++MKYAI KL+ TE
Sbjct: 111 VENLSSRVTWQDLKDYMRQCGEVVYADANRYRRNE-GVVEFSSRKEMKYAIEKLNGTEI 168
>gi|170087376|ref|XP_001874911.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650111|gb|EDR14352.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 297
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 95/184 (51%), Gaps = 21/184 (11%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
SR +Y+G LP+D R +V F YGRI+D + + FVEFENA+DAEDA+
Sbjct: 1 MSRRLYLGRLPTDARSDDVSKFFDGYGRIIDCRVMT-----GFGFVEFENAKDAEDAVHN 55
Query: 65 RDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
+G F G + VE A R + RGG GG GA GI
Sbjct: 56 FNGKPFMGVNIVVEFAKESRPRREVYDNDRGG---------GGHGAPRSRRPPGI----- 101
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDD 184
R+IV G+ SWQDLKD R AG V FA++ RD G GV++Y + ED A+++LD
Sbjct: 102 -RLIVSGVSRDTSWQDLKDFGRDAGSVSFADIDRDVPGQ-GVLEYLSREDADRAVKELDG 159
Query: 185 TEFR 188
+ R
Sbjct: 160 KDLR 163
>gi|440893251|gb|ELR46093.1| Serine/arginine-rich splicing factor 6 [Bos grunniens mutus]
Length = 348
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 104/184 (56%), Gaps = 18/184 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+I+LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHG-----GSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHS 123
G R+ VE A G G SS D+ GG + +G ++G +
Sbjct: 59 ELCGERVIVEHARGPRRDRGDWVVVSSHDKG-------GGGGYSSRRTSGRDKYGPPVRT 111
Query: 124 EYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLD 183
E+R+IV L S SWQDLKD MR+AG+V +A+ ++ GV+++ + DMK A+ KLD
Sbjct: 112 EFRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNE-GVIEFRSYSDMKRALDKLD 170
Query: 184 DTEF 187
TE
Sbjct: 171 GTEI 174
>gi|348514746|ref|XP_003444901.1| PREDICTED: hypothetical protein LOC100690823 [Oreochromis
niloticus]
Length = 396
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 103/181 (56%), Gaps = 13/181 (7%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L +RE +++ F YG++++I+LK Y FVEFE+ RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGKLMEIDLK-----NGYGFVEFEDNRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGR--FGISRHSEYR 126
G R+ VE A RGP G G G G + G + + +GR +G +EYR
Sbjct: 59 ELCGERVIVEHA-----RGPRRDRDGYGGGYWGGGRSNGYSSRSRSGRDKYGPPVRTEYR 113
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTE 186
+IV L S SWQDLKD MR+AG+V +A+ ++ GV+++ DMK A+ KLD T+
Sbjct: 114 LIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNE-GVIEFRTYSDMKRALDKLDGTD 172
Query: 187 F 187
Sbjct: 173 I 173
>gi|225718298|gb|ACO14995.1| Splicing factor, arginine/serine-rich 4 [Caligus clemensi]
Length = 234
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 96/182 (52%), Gaps = 16/182 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+GN+ + RE +VE F YG++ +I LK Y FVEFE+ RDA+DA++ DG
Sbjct: 8 LYLGNVSDETRERDVEKFFKGYGKLREIALK-----NGYGFVEFEDHRDADDAVQDLDGK 62
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGY---GGGGAGGAGGAGAGAGAGRFGISRHSEY 125
+ +G R+RVE A S D+RGG GA R R ++Y
Sbjct: 63 DMNGSRVRVEFAR-------SPRDKRGGSRYPSTSSRRSPPRGRRGAPIKRNPPGRRTQY 115
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
R+ V L S ASWQDLKD+ R GD+ + + GVV++ + M+ A+ +LDDT
Sbjct: 116 RIRVENLSSRASWQDLKDYFRSCGDITYTNAHK-PRNNEGVVEFGDKRAMENALDRLDDT 174
Query: 186 EF 187
E
Sbjct: 175 EL 176
>gi|193716028|ref|XP_001949124.1| PREDICTED: serine-arginine protein 55-like isoform 1 [Acyrthosiphon
pisum]
Length = 309
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 97/182 (53%), Gaps = 10/182 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VG L +RE ++E F K GR+ DI +K Y FVEF++ RDA+DA+ +G
Sbjct: 7 VFVGGLSHRVRERDLERFFQKIGRVKDIAMK-----NGYAFVEFDDYRDADDAVYELNGR 61
Query: 69 NFDGCRLRVELAHGGSGRGPS---SSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
+G R+ VE A G+ RG S R G R+G + Y
Sbjct: 62 ELNGERVSVERAR-GTPRGSDVWRGSGRGGDLPPPPPRRPRRDARDDRNDRYGPPTRTNY 120
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
R+IV L S SWQDLKD MR+AG+V +A+ + + GVV++ + D+K A+ KLDDT
Sbjct: 121 RLIVENLSSRVSWQDLKDFMRQAGEVTYADAHKQRKNE-GVVEFASYSDLKTALDKLDDT 179
Query: 186 EF 187
E
Sbjct: 180 EL 181
>gi|327280352|ref|XP_003224916.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Anolis
carolinensis]
Length = 261
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 94/179 (52%), Gaps = 16/179 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VG L RE +VE F YGRI +I LK + FVEFE+ RDA+DA+ +G
Sbjct: 6 VFVGRLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFEDHRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
R+ +E A G S R Y G G+ ++G +E+R+I
Sbjct: 61 ELCNERVTIEHARARRGGRGRYSQRFSYY----------QSYGGGSSQYGPPLRTEHRLI 110
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MRKAG+V F + R++ GVV++ + DMK A+ KLD +E
Sbjct: 111 VENLSSRVSWQDLKDFMRKAGEVTFVDAHRNNPNE-GVVEFASSSDMKSAMDKLDGSEL 168
>gi|410930984|ref|XP_003978877.1| PREDICTED: uncharacterized protein LOC101068731 [Takifugu rubripes]
Length = 379
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 100/179 (55%), Gaps = 16/179 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L +RE +++ F YG++++I+LK Y FVEFE+ RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGKLMEIDLK-----NGYGFVEFEDNRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A RGP R G G + + G ++G +EYR++
Sbjct: 59 ELCGERVIVEHA-----RGP-----RRDRDFYGGGSGYSSRSRTGRDKYGPPVRTEYRLV 108
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MR+AG+V +A+ ++ GV+++ + DMK A+ KLD T+
Sbjct: 109 VENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNE-GVIEFRSHSDMKRALDKLDGTDI 166
>gi|45120092|ref|NP_957161.1| serine/arginine-rich splicing factor 5a [Danio rerio]
gi|37681945|gb|AAQ97850.1| splicing factor, arginine/serine-rich 5 [Danio rerio]
Length = 259
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 98/187 (52%), Gaps = 26/187 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI +I LK + FVEF++ RDA+DA+ +G
Sbjct: 6 VFIGRLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSS--------SDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
C RV + H S RG S R GGY +GG+ R+G
Sbjct: 61 EL--CSERVTIEHARSRRGRGGGPGMGGRFSPRFGGYRQSRSGGS----------RYGPP 108
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
+E+R+IV L S SWQDLKD MRK G+V F + R ++ GVV++ + DMK AI
Sbjct: 109 VRTEHRIIVENLSSRISWQDLKDLMRKVGEVTFVDAHR-TKKNEGVVEFASHSDMKNAIE 167
Query: 181 KLDDTEF 187
KLD T+
Sbjct: 168 KLDGTDL 174
>gi|270014159|gb|EFA10607.1| hypothetical protein TcasGA2_TC012868 [Tribolium castaneum]
Length = 424
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 95/182 (52%), Gaps = 27/182 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP E ++E F YGR+ D+ +K Y FVEF++ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGTTERDLERFFRGYGRMRDVLIK-----NGYGFVEFDDHRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHG---GSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
G R+ VE A G G + S SD R R+G + Y
Sbjct: 61 KLLGERVTVERARGTPRGRDQWSSRSDHR------------------SHERYGPPTRTNY 102
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
R+IV L S SWQDLKD+MR+AG+V +A+ + GVV++ + D+K AI KLDDT
Sbjct: 103 RLIVENLSSRISWQDLKDYMRQAGEVTYADAHKQHRNE-GVVEFASYSDLKNAIEKLDDT 161
Query: 186 EF 187
E
Sbjct: 162 EL 163
>gi|402219133|gb|EJT99207.1| hypothetical protein DACRYDRAFT_23817 [Dacryopinax sp. DJM-731 SS1]
Length = 319
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 96/183 (52%), Gaps = 26/183 (14%)
Query: 6 SRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGR 65
S+ IY+G +P D + ++E F YGRI DI + + FVEFEN +DAED +
Sbjct: 3 SKRIYIGKMPRDAMKQDIEKFFEGYGRIQDIRIMN-----GFGFVEFENPKDAEDVVANF 57
Query: 66 DGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
G N G + +ELA S +R GG+ G +R Y
Sbjct: 58 QGKNLLGEPIIIELAKE------SRRERGGGFEERGPRP--------------FTRRPGY 97
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
RV++ G+ SWQDLKD R+AG V F+++ R++ G G+++Y P+D++ A+R L++
Sbjct: 98 RVLIHGVSRDTSWQDLKDFGREAGAVTFSDLDRENPGE-GILEYLTPDDLENALRLLNNR 156
Query: 186 EFR 188
E R
Sbjct: 157 ELR 159
>gi|148238297|ref|NP_001085381.1| serine/arginine-rich splicing factor 4 [Xenopus laevis]
gi|49257226|gb|AAH71160.1| MGC83263 protein [Xenopus laevis]
Length = 259
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 95/179 (53%), Gaps = 9/179 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI +I LK + FVEF++ RDA+DA+ +G
Sbjct: 6 VFIGRLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
R+ +ELA GRG G Y A +G G R+G +E+R+I
Sbjct: 61 VLCNERVTIELARNRRGRGGMMGGGGGRYPNRFAYRQSNSG---GPSRYGPPVRTEHRII 117
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MRKAG+V + + R S GVV++ + DMK A+ KLD E
Sbjct: 118 VENLSSRVSWQDLKDFMRKAGEVTYVDAHR-SNRNEGVVEFASYSDMKSALDKLDGVEL 175
>gi|71895047|ref|NP_001026014.1| splicing factor, arginine/serine-rich 6 [Gallus gallus]
gi|53133810|emb|CAG32234.1| hypothetical protein RCJMB04_20j14 [Gallus gallus]
Length = 348
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 103/180 (57%), Gaps = 12/180 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L +RE +++ F YGR+L+++LK Y FV+FE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGRLLEVDLK-----NGYGFVKFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGP-SSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRV 127
+ G R+ VE A RGP D G GG + +G ++G +E+R+
Sbjct: 59 DLCGERVIVEHA-----RGPRRDRDGYSYSSRSGGGGGYSSRRQSGRDKYGPPVRTEHRL 113
Query: 128 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
IV L S SWQDLKD MR+AG+V +A+ ++ GV+++ + DMK A+ KLD TE
Sbjct: 114 IVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNE-GVIEFRSYSDMKRALDKLDGTEI 172
>gi|156379214|ref|XP_001631353.1| predicted protein [Nematostella vectensis]
gi|156218392|gb|EDO39290.1| predicted protein [Nematostella vectensis]
Length = 200
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 94/179 (52%), Gaps = 14/179 (7%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
I++G LP D+RE +VE YG+I DI LK Y FVEF++ RDAEDA+ +G
Sbjct: 4 IFLGRLPRDVRESDVEKFLRGYGKIRDISLK-----RGYGFVEFDDHRDAEDAVHDLNGR 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE + G G DRR G G +G + Y VI
Sbjct: 59 DLIGERVVVEFSKGRRSEG-GGRDRRDF-------SGRGGRDGGRRPIYGPPVRTNYSVI 110
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+ RK G V +A+ + G GVV++ + +D+ AI KLDDTE
Sbjct: 111 VENLSSRTSWQDLKDYFRKYGKVTYADAHKKRIGE-GVVEFESKDDLNTAIEKLDDTEL 168
>gi|213401865|ref|XP_002171705.1| pre-mRNA-splicing factor srp2 [Schizosaccharomyces japonicus
yFS275]
gi|211999752|gb|EEB05412.1| pre-mRNA-splicing factor srp2 [Schizosaccharomyces japonicus
yFS275]
Length = 375
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 90/175 (51%), Gaps = 28/175 (16%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G LPS +VED F YGRILD +L + F+E EN RDA D + DG
Sbjct: 6 LFIGRLPSQAAREDVEDFFKGYGRILDCKLMN-----GFGFLELENPRDARDIVN--DGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
F G R+ VE A G R + D GA ++ R + YR+I
Sbjct: 59 EFMGERIIVEPARGERRRRDTFRD--------------------GAAKYPRPRRTGYRLI 98
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLD 183
V L SWQDLKD MRKAG+ F + R+ GT GVV+++ +DMK+A+ L+
Sbjct: 99 VENLAEDVSWQDLKDVMRKAGEPTFTDAHREQRGT-GVVEFSTEDDMKHALDTLN 152
>gi|432882989|ref|XP_004074178.1| PREDICTED: uncharacterized protein LOC101163182 isoform 2 [Oryzias
latipes]
Length = 384
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 99/191 (51%), Gaps = 29/191 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYRAREKDVERFFKGYGKILEVDLK-----NGYGFVEFDDPRDADDAVYDLNGK 58
Query: 69 NFDGCRLRVELAHGGS------------GRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGR 116
G R+ VE G + S S + GGYG G G R
Sbjct: 59 ELCGERVIVEHTKGPRRDGGYGGGGRNLDQESSRSSKNGGYGRWG-----------GRDR 107
Query: 117 FGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMK 176
+G ++YR+IV L S SWQDLKD+MR+AG+V +A+ + GV+++ DMK
Sbjct: 108 YGPPVRTDYRLIVENLSSRCSWQDLKDYMRQAGEVTYADTHKGRRNE-GVIEFRQYSDMK 166
Query: 177 YAIRKLDDTEF 187
A+ KLD TE
Sbjct: 167 RALEKLDGTEV 177
>gi|426241491|ref|XP_004014624.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1 [Ovis
aries]
Length = 344
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 100/179 (55%), Gaps = 12/179 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+I+LK Y FVEFE++RDA+DA+
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYEP--- 55
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
N C RV + H RGP G GG + +G ++G +E+R+I
Sbjct: 56 NAKLCGERVIVEH---ARGPXXXXXXFSSHDKGGGGGYSSRRTSGRDKYGPPVRTEFRLI 112
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MR+AG+V +A+ ++ GV+++ + DMK A+ KLD TE
Sbjct: 113 VENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNE-GVIEFRSYSDMKRALDKLDGTEI 170
>gi|392567011|gb|EIW60186.1| hypothetical protein TRAVEDRAFT_27854 [Trametes versicolor
FP-101664 SS1]
Length = 288
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 96/184 (52%), Gaps = 27/184 (14%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
+R +Y+G LP D+R EV F YGRI+D + + FVEFE++RDAEDA++
Sbjct: 1 MARRLYLGRLPPDVRSEEVSKFFDGYGRIVDCRVMT-----GFGFVEFESSRDAEDAMQN 55
Query: 65 RDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
+G NF G + VE A + RR Y A A R
Sbjct: 56 FNGKNFMGSNIVVEFAK-------ETRPRRDPYDADRAVRA--------------RRPPG 94
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDD 184
+RVIV G+ SWQDLKD R+AG V +A++ RD+ G G+++Y + ED + A++ LD
Sbjct: 95 FRVIVSGISRDTSWQDLKDFGREAGSVSYADIDRDNPGE-GILEYLSREDSERAVKDLDG 153
Query: 185 TEFR 188
+ R
Sbjct: 154 RDLR 157
>gi|391330800|ref|XP_003739841.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Metaseiulus
occidentalis]
Length = 303
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 96/182 (52%), Gaps = 26/182 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L RE ++E LF YGRI +I LK + FVEFE+ RDAEDA +G
Sbjct: 9 LYVGRLSHRTRERDLERLFSPYGRIREILLK-----SGFAFVEFEDTRDAEDACYELNGK 63
Query: 69 NFDGCRLRVELAHGGS-GRG--PSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
+ G R+ VE+A G GRG P R G+ ++G + ++Y
Sbjct: 64 DLLGDRIVVEMAKGTERGRGGLPMRGQRDKGW----------------MDKYGPFKRTDY 107
Query: 126 RVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDD 184
RVIV L + SWQDLKD MRK G +VC+A+ + + V+++ DMK AI+K D
Sbjct: 108 RVIVGNLSTRVSWQDLKDMMRKVGCEVCYADAHKHRKNE-AVIEFATRSDMKRAIQKYDG 166
Query: 185 TE 186
E
Sbjct: 167 HE 168
>gi|346468607|gb|AEO34148.1| hypothetical protein [Amblyomma maculatum]
Length = 338
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 95/179 (53%), Gaps = 19/179 (10%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L ++RE ++E F +GRI +I +K + FVEF++ RDA+DA+ +G
Sbjct: 5 VYVGRLNYEVRERDLERFFKGFGRIREISIK-----NGFGFVEFDDHRDADDAVYELNGK 59
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VELA RG G + A R+G +EY++
Sbjct: 60 ELLGDRVSVELA-------------RGIRRGADYYRSRAASRSPPRRRYGPPTRTEYQLT 106
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ R GVV++ DMK A+ KLD+T+
Sbjct: 107 VENLSSRVSWQDLKDYMRQAGEVTYADAHRLRRNE-GVVEFATYSDMKNALEKLDNTDL 164
>gi|198421230|ref|XP_002126938.1| PREDICTED: similar to splicing factor, arginine/serine-rich 4
isoform 2 [Ciona intestinalis]
Length = 280
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 101/179 (56%), Gaps = 9/179 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+I D+ LK + FV F++ RDA+DAI +G
Sbjct: 7 VYIGRLSHRARENDVEHFFRGYGKINDLMLK-----NGFGFVIFDDERDADDAIHDLNGK 61
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ +E+A G + RGP DRR + + + GI H YR+I
Sbjct: 62 SLCGERVMLEIAKG-TPRGPGG-DRRESSSRRSSSSSYYQQQQPRSSTKGIPNHG-YRLI 118
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S +WQDLKD+MR+ G+V +A+ +R GVV++++ ++MKYAI KL+ TE
Sbjct: 119 VENLSSRVTWQDLKDYMRQCGEVVYADANRYRRNE-GVVEFSSRKEMKYAIEKLNGTEI 176
>gi|338721826|ref|XP_001500325.3| PREDICTED: serine/arginine-rich splicing factor 4 [Equus caballus]
Length = 497
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 97/167 (58%), Gaps = 23/167 (13%)
Query: 24 EDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGG 83
+D YG+IL+++LK Y FVEF++ RDA+DA+ +G + G R+ VE A
Sbjct: 15 QDNTMGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHA--- 66
Query: 84 SGRGPSSSDRRGGYGGGGAGGAGGAGAG---AGAGRFGISRHSEYRVIVRGLPSSASWQD 140
RGP R G YG +G +G G +G ++G +EYR+IV L S SWQD
Sbjct: 67 --RGPR---RDGSYG------SGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQD 115
Query: 141 LKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
LKD+MR+AG+V +A+ + + GV+++ + DMK A+ KLD TE
Sbjct: 116 LKDYMRQAGEVTYADAHKGRKNE-GVIEFVSYSDMKRALEKLDGTEV 161
>gi|390352204|ref|XP_003727843.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Strongylocentrotus purpuratus]
Length = 302
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 101/182 (55%), Gaps = 9/182 (4%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L RE +VE F +GRI +I LK + FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGRLSYQARERDVERFFRGFGRIREINLK-----NGFGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHG---GSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
G R+ +E A G G + GG GG G G GG G + R+G +E+
Sbjct: 61 ELVGERVIIEHARGPARGRDEYRFGGEGGGGGGGRGRDGGGGGGGSRSSQRYGPPVRTEF 120
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
R++V L S SWQDLKD+MR+AG+V FA+ + + G+V++ DMK A+ KLD T
Sbjct: 121 RIVVENLSSRVSWQDLKDYMRQAGEVTFADAHKQHKNE-GIVEFATYSDMKNAVEKLDGT 179
Query: 186 EF 187
E
Sbjct: 180 EI 181
>gi|198415633|ref|XP_002121331.1| PREDICTED: similar to splicing factor, arginine/serine-rich 4
[Ciona intestinalis]
Length = 292
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 96/192 (50%), Gaps = 20/192 (10%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F +G+I DI LK Y FVEF+++RDA+DA+ +
Sbjct: 6 VFIGRLSHRARENDVERFFKGFGKIRDINLK-----NGYGFVEFDDSRDADDAVYEMNNR 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGA-------------GAG 115
+ G R+ VELA G R D R + G
Sbjct: 61 DLCGERVTVELARG-VPRSSGGRDYRPDFRNDYRNDYRRRDDRGGGGGGRVNYFDSRAIG 119
Query: 116 RFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDM 175
++G + YRVIV L + SWQDLKD++R+AG+V +A+ + GVVD+ +DM
Sbjct: 120 KYGPPTRTNYRVIVENLSTRVSWQDLKDYLREAGEVTYADAHKHRRNE-GVVDFATYDDM 178
Query: 176 KYAIRKLDDTEF 187
K AI KLD+TE
Sbjct: 179 KRAIDKLDNTEI 190
>gi|156358473|ref|XP_001624543.1| predicted protein [Nematostella vectensis]
gi|156211330|gb|EDO32443.1| predicted protein [Nematostella vectensis]
Length = 189
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 98/179 (54%), Gaps = 17/179 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y G LP D RE ++E YGR+ +I +K+ Y FVEF++ RDA+D + +G
Sbjct: 7 VYFGRLPRDCRERDLEKFVRGYGRVREISMKLG-----YGFVEFDDYRDADDCVYDLNGR 61
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
N G R+ VE R PS G G + + GR R +E+R+
Sbjct: 62 NLLGERVVVE-----HSRNPSR-----GSDYGYRRDSSSRSRSSRRGRTPPIR-TEHRLA 110
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S ++WQDLK++M K G+V FA+ + +G GVV++ +DMK A++KLDDTEF
Sbjct: 111 VENLSSRSNWQDLKEYMGKVGEVTFADAHKRRQGE-GVVEFATKDDMKTALKKLDDTEF 168
>gi|432864636|ref|XP_004070385.1| PREDICTED: uncharacterized protein LOC101162527 isoform 1 [Oryzias
latipes]
Length = 367
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 101/179 (56%), Gaps = 7/179 (3%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L +RE +++ F YG++L++++K Y FVEFE+ RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGKLLEVDMK-----NGYGFVEFEDNRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A G R +GGG + + + G ++G +EYR+I
Sbjct: 59 ELCGERVIVEHARGPR-RDRDGYGGGSSWGGGRSNNSSSSRTRVGRDKYGPPVRTEYRLI 117
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MR+AG+V +A+ ++ GV+++ + DMK A+ KLD T+
Sbjct: 118 VENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNQ-GVIEFRSYSDMKRALDKLDGTDI 175
>gi|426241493|ref|XP_004014625.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 2 [Ovis
aries]
Length = 339
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 100/179 (55%), Gaps = 17/179 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+I+LK Y FVEFE++RDA+DA+
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYEP--- 55
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
N C RV + H RGPS GG + +G ++G +E+R+I
Sbjct: 56 NAKLCGERVIVEH---ARGPSRE-----GSYSSGGGGYSSRRTSGRDKYGPPVRTEFRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MR+AG+V +A+ ++ GV+++ + DMK A+ KLD TE
Sbjct: 108 VENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNE-GVIEFRSYSDMKRALDKLDGTEI 165
>gi|221485545|gb|EEE23826.1| splicing factor, putative [Toxoplasma gondii GT1]
Length = 351
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 100/199 (50%), Gaps = 27/199 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IY+G+LP + + +VE F K+G+I+ +E K YCF+E+ + RDA DAI G
Sbjct: 17 IYIGSLPGEYTDKDVEREFEKFGKIIKLEFKRTVSGAGYCFLEYADPRDARDAIAQLHGR 76
Query: 69 NFDGCR----LRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
G R LRVE+ + S R G+G A G GRF +
Sbjct: 77 PPPGMRGAAPLRVEIPL-------ARSSRPDGFG----EEALPRGLAGRRGRFVLE---- 121
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEG---TYGVVDYTNPEDMKYAIRK 181
VRGLP S SWQDLKDH R GDV FAEV +D + G V + + DM AI
Sbjct: 122 ----VRGLPPSGSWQDLKDHFRGIGDVGFAEVRKDPDAPDSVMGKVSFFSKRDMMEAIEV 177
Query: 182 LDDTEFR-NPWARGRITVK 199
LD + FR + + RI+V+
Sbjct: 178 LDGSTFRSHEGEKSRISVR 196
>gi|320038617|gb|EFW20552.1| pre-RNA splicing factor Srp2 [Coccidioides posadasii str. Silveira]
gi|392870837|gb|EJB12074.1| pre-RNA splicing factor Srp2 [Coccidioides immitis RS]
Length = 302
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 111/220 (50%), Gaps = 29/220 (13%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDA 58
MS S +Y+GNLP ++ + +VE+ F ++G +I DI+L + F+E+E+A DA
Sbjct: 1 MSEVSSTRLYLGNLPRNVTKQDVEEHFNQHGSGKITDIKLMS-----GFGFIEYEDALDA 55
Query: 59 EDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFG 118
D + G +F G RL V+ A RGP + G + A R
Sbjct: 56 RDVVPAYHGTDFKGSRLTVQFA-----RGPRHKE-----------TFSGPSDRSNAPR-- 97
Query: 119 ISRHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKY 177
R + YR+ + GLP + SWQDLKD R++G DV ++E RD EG G V++ D+K
Sbjct: 98 -PRRTPYRMQISGLPET-SWQDLKDFARQSGLDVVYSETLRDHEGR-GFVEFETGADLKT 154
Query: 178 AIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSR 217
AI KLD EF+ ++ D P R RSRS R
Sbjct: 155 AIEKLDGREFKGSRVTCTQDIQAPDDRPVRDPYRSRSPVR 194
>gi|237844047|ref|XP_002371321.1| splicing factor, putative [Toxoplasma gondii ME49]
gi|211968985|gb|EEB04181.1| splicing factor, putative [Toxoplasma gondii ME49]
gi|221506395|gb|EEE32030.1| splicing factor, putative [Toxoplasma gondii VEG]
Length = 351
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 100/199 (50%), Gaps = 27/199 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IY+G+LP + + +VE F K+G+I+ +E K YCF+E+ + RDA DAI G
Sbjct: 17 IYIGSLPGEYTDKDVEREFEKFGKIIKLEFKRTVSGAGYCFLEYADPRDARDAIAQLHGR 76
Query: 69 NFDGCR----LRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
G R LRVE+ + S R G+G A G GRF +
Sbjct: 77 PPPGMRGAAPLRVEIPL-------ARSSRPDGFG----EEALPRGLAGRRGRFVLE---- 121
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEG---TYGVVDYTNPEDMKYAIRK 181
VRGLP S SWQDLKDH R GDV FAEV +D + G V + + DM AI
Sbjct: 122 ----VRGLPPSGSWQDLKDHFRGIGDVGFAEVRKDPDAPDSVMGKVSFFSKRDMMEAIEV 177
Query: 182 LDDTEFR-NPWARGRITVK 199
LD + FR + + RI+V+
Sbjct: 178 LDGSTFRSHEGEKSRISVR 196
>gi|346326093|gb|EGX95689.1| Nucleotide-binding, alpha-beta plait [Cordyceps militaris CM01]
Length = 332
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 103/192 (53%), Gaps = 28/192 (14%)
Query: 1 MSGRFSRT-IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARD 57
MS S T +Y+GNLP + + ++E F +G I +++L + F+E+++ D
Sbjct: 1 MSNEVSNTRLYLGNLPPNATKADIEAHFATHGTGEITEVKLMH-----GFGFIEYKDPMD 55
Query: 58 AEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRF 117
A D + DG +F G RL V+ A G R P GYG AGGA A R
Sbjct: 56 ARDVVP--DGSDFKGTRLTVQFARGPRPREPP------GYG------AGGAHHERAAPR- 100
Query: 118 GISRHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMK 176
R + +R+ + GLP+ SWQDLKD R+AG DV ++E +RDS G V+Y N D++
Sbjct: 101 --PRRTIHRMTITGLPNETSWQDLKDFARQAGPDVVYSETARDS--GRGFVEYENANDLR 156
Query: 177 YAIRKLDDTEFR 188
A+ KLD EF+
Sbjct: 157 TAVEKLDGFEFK 168
>gi|159163525|pdb|1X4A|A Chain A, Solution Structure Of Rrm Domain In Splicing Factor Sf2
Length = 109
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/84 (61%), Positives = 62/84 (73%), Gaps = 2/84 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 25 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 84
Query: 69 NFDGCRLRVELAHG--GSGRGPSS 90
++DG RLRVE G+G GPSS
Sbjct: 85 DYDGYRLRVEFPRSGRGTGSGPSS 108
>gi|410911522|ref|XP_003969239.1| PREDICTED: uncharacterized protein LOC101080136 isoform 1 [Takifugu
rubripes]
Length = 374
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 94/179 (52%), Gaps = 20/179 (11%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYRARENDVERFFKGYGKILEVDLK-----NGYGFVEFDDPRDADDAVYDLNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE +GP G G R+G ++YR+I
Sbjct: 59 ELCGERVIVEHT-----KGPRRD---------GGYSGRSGYGRWGRDRYGPPIRTDYRLI 104
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ + + GV+++ DMK A+ KLD TE
Sbjct: 105 VENLSSRCSWQDLKDYMRQAGEVTYADTHKGRKNE-GVIEFRQYSDMKRALEKLDGTEV 162
>gi|348688828|gb|EGZ28642.1| hypothetical protein PHYSODRAFT_353568 [Phytophthora sojae]
Length = 173
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 97/179 (54%), Gaps = 10/179 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP D E++D F +YG + +I + PP + FV+FE+ RDA+DAIR DG
Sbjct: 5 VYVGGLPRDATSREIQDGFNRYGHVSNI--WVARNPPGFAFVDFEDPRDADDAIRSMDGR 62
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+F G R+RVELA GGS R GG G G G + ++YRV
Sbjct: 63 DFLGGRIRVELARGGSRRDGGGRRGDDDRGGYGGRGGDRFDRGRNP-----PQRTDYRVR 117
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V LP W+++KD +R G+V + + D + ++ +DM+ AI+KLDDTEF
Sbjct: 118 VTDLPRDVDWRNVKDFLRTGGEVTYCNIEADGS---AIAEFQTKDDMEDAIKKLDDTEF 173
>gi|332024474|gb|EGI64672.1| Serine-arginine protein 55 [Acromyrmex echinatior]
Length = 367
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 103/230 (44%), Gaps = 49/230 (21%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELK-----IPPRPPCYC----------- 48
S ++VG L +RE ++E F KYGRI ++ +K + R C
Sbjct: 1 MSTRVFVGGLTYRVRERDLEKFFRKYGRIKEVAMKNGFAFVYGRDKSLCQRDLERFFRGY 60
Query: 49 -------------FVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSS---SD 92
FVEF++ RDA+DA+ +G G R+ VE A G + RG D
Sbjct: 61 GRFRDVLIKNGYGFVEFDDYRDADDAVYELNGKELLGERITVERARG-TPRGSDQWRYGD 119
Query: 93 RRGGYGGG---------------GAGGAGGAGAGAGAGRFGISRHSEYRVIVRGLPSSAS 137
RGGYG + R+G +EYR+ V L S S
Sbjct: 120 SRGGYGDSRRSARDDMRHDRDSVNRNTRTASSYKQSLPRYGPPTRTEYRLTVENLSSRVS 179
Query: 138 WQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
WQDLKD+MR+AG+V +A+ + GVV++ D+K AI KLDDTE
Sbjct: 180 WQDLKDYMRQAGEVTYADAHKQRRNE-GVVEFATYSDLKNAIDKLDDTEL 228
>gi|225712276|gb|ACO11984.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
Length = 329
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 102/190 (53%), Gaps = 13/190 (6%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M R +++GNLP +RE ++E F +YGR+ +I +K Y F EF++ RDA+D
Sbjct: 1 MPSREGCRVFLGNLPYSVRERDIERFFERYGRVYNIFIKSGK----YGFCEFDDYRDADD 56
Query: 61 AIRGRDGYNFDGCRL---RVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRF 117
A+ Y +GC L R+ + H GR G GGGG G G G G++
Sbjct: 57 AV-----YKLNGCELNSERITVEHARGGRRAEGRSSGGSGGGGGYRGDRYRGRRGGRGKY 111
Query: 118 GISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKY 177
G + YRVIV L + SWQDLKD MR+AG+V FA+ D GVV++ + DM+
Sbjct: 112 GPPTRTNYRVIVENLSTRVSWQDLKDVMRRAGEVTFADAHNDKRNE-GVVEFISRRDMER 170
Query: 178 AIRKLDDTEF 187
AI K D+ E
Sbjct: 171 AIDKFDNHEL 180
>gi|47212671|emb|CAF94152.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1550
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 108/208 (51%), Gaps = 26/208 (12%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYRARENDVERFFKGYGKILEVDLKN-----GYGFVEFDDPRDADDAVYDLNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE +GP RR G G R+G ++YR+I
Sbjct: 59 ELCGERVIVE-----HTKGP----RRDG-----GYSGRSGYGRWGRDRYGPPIRTDYRLI 104
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V L S SWQDLKD+MR+AG+V +A+ + + GV+++ DMK A+ KLD TE
Sbjct: 105 VENLSSRCSWQDLKDYMRQAGEVTYADTHKGRKNE-GVIEFRQYSDMKRALEKLDGTE-- 161
Query: 189 NPWARGRITVKRYDRSPSRSRSRSRSRS 216
GR ++ + P R RS SRS
Sbjct: 162 ---VNGR-KIRLIEDRPGAKRRRSYSRS 185
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 75/140 (53%), Gaps = 15/140 (10%)
Query: 47 YCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAG 106
Y FVEF++ RDA+DA+ +G G R+ VE +GP RR G
Sbjct: 1209 YGFVEFDDPRDADDAVYDLNGKELCGERVIVE-----HTKGP----RRDG-----GYSGR 1254
Query: 107 GAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGV 166
G R+G ++YR+IV L S SWQDLKD+MR+AG+V +A+ + + GV
Sbjct: 1255 SGYGRWGRDRYGPPIRTDYRLIVENLSSRCSWQDLKDYMRQAGEVTYADTHKGRKNE-GV 1313
Query: 167 VDYTNPEDMKYAIRKLDDTE 186
+++ DMK A+ KLD TE
Sbjct: 1314 IEFRQYSDMKRALEKLDGTE 1333
>gi|169404002|ref|NP_955868.1| serine/arginine-rich splicing factor 4 [Danio rerio]
gi|326676581|ref|XP_003200617.1| PREDICTED: hypothetical protein LOC321872 [Danio rerio]
gi|28461393|gb|AAH46895.1| Zgc:55809 [Danio rerio]
gi|182890456|gb|AAI64410.1| Zgc:55809 protein [Danio rerio]
Length = 366
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 101/179 (56%), Gaps = 14/179 (7%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYVGKLSYRAREKDVERFFKGYGKILEVDLK-----NGYGFVEFDDPRDADDAVYDLNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE G R GG G + G G G G R+G ++YR+I
Sbjct: 59 DLCGKRVIVEHTIG--------QRRDGGNRSGRSNRYGRGGGGGGGDRYGPPTRTDYRLI 110
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ ++ + GV+++ DMK A+ KLD TE
Sbjct: 111 VENLSSRCSWQDLKDYMRQAGEVTYADTNKGRKNE-GVIEFRQYSDMKRALEKLDGTEV 168
>gi|427777525|gb|JAA54214.1| Putative alternative splicing factor asf/sf2 [Rhipicephalus
pulchellus]
Length = 333
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 97/203 (47%), Gaps = 49/203 (24%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VG L D+RE ++E F YGRI DI LK + FV+ + RDAEDA+R +G
Sbjct: 5 VFVGRLNYDVRERDLERFFRGYGRIEDIVLK-----NGFGFVDISDYRDAEDAVRDLNGK 59
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VELA G RGP DR G RFG + Y+++
Sbjct: 60 RLMGERVTVELARGMR-RGPPDYDR-------------------GPRRFGPPTRTNYQLL 99
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAE--------------VSRDSEGTY---------- 164
V L +S SWQDLKD MR+AGDV + + + + TY
Sbjct: 100 VENLSTSVSWQDLKDFMRQAGDVTYTXNLSTSVSWQDLKDFMRQAGDVTYTDAHKLRRHQ 159
Query: 165 GVVDYTNPEDMKYAIRKLDDTEF 187
GVV++ + DMK A+R LD+
Sbjct: 160 GVVEFASYSDMKNALRSLDNVSL 182
>gi|390352206|ref|XP_798746.2| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Strongylocentrotus purpuratus]
Length = 349
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 102/196 (52%), Gaps = 28/196 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L RE +VE F +GRI +I LK + FVEFE+ RDA+DA+ +G
Sbjct: 44 VYVGRLSYQARERDVERFFRGFGRIREINLK-----NGFGFVEFEDYRDADDAVYELNGK 98
Query: 69 NFDGCRLRVELAHGGSGRGPSS--SDRRGGYGGGG---------------AGGAGGAGAG 111
G R+ +E A RGP+ + R GY G G GG G
Sbjct: 99 ELVGERVIIEHA-----RGPARGRDEYRYGYRRRGDKFGGEGGGGGGGRGRDGGGGGGGS 153
Query: 112 AGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTN 171
+ R+G +E+R++V L S SWQDLKD+MR+AG+V FA+ + + G+V++
Sbjct: 154 RSSQRYGPPVRTEFRIVVENLSSRVSWQDLKDYMRQAGEVTFADAHKQHKNE-GIVEFAT 212
Query: 172 PEDMKYAIRKLDDTEF 187
DMK A+ KLD TE
Sbjct: 213 YSDMKNAVEKLDGTEI 228
>gi|157133042|ref|XP_001662753.1| arginine/serine-rich splicing factor [Aedes aegypti]
gi|108870967|gb|EAT35192.1| AAEL012621-PA [Aedes aegypti]
Length = 342
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 95/185 (51%), Gaps = 13/185 (7%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA + Y
Sbjct: 6 VYVGGLPHGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAP-TQTHY 59
Query: 69 NFDGCRLRVEL------AHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRH 122
F RV + A GG R R GGG + R+G
Sbjct: 60 IFLLLIYRVTVEPARGTARGGGSRRDHDRYDRYDRRGGGGRYDKNRSNSRNSSRYGPPLR 119
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKL 182
+EYR+ V L S SWQDLKD+MR+AG+V +A+ + + GVV++ DMK AI KL
Sbjct: 120 TEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRKNE-GVVEFATSSDMKTAIDKL 178
Query: 183 DDTEF 187
DDTE
Sbjct: 179 DDTEL 183
>gi|405963003|gb|EKC28616.1| Splicing factor, arginine/serine-rich 4 [Crassostrea gigas]
Length = 553
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 104/218 (47%), Gaps = 43/218 (19%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M R +Y+G L RE +VE F YGR+ D+ LK Y FVEFE+ RDA+D
Sbjct: 236 MKNRMGTRVYIGRLSHHARERDVERFFKGYGRLRDVMLK-----NGYGFVEFEDYRDADD 290
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
A+ +G + G R+ VE A G GP DRR Y A + G G ++G
Sbjct: 291 AVYELNGKDLAGERVIVEHARG----GPRGDDRRNSYRDYPP--ARRSRGGGGRDKYGPP 344
Query: 121 RHSEYRVIVRGLPSSASWQ-------------------------------DLKDHMRKAG 149
+EYR+IV L S SWQ DLKD+MR+AG
Sbjct: 345 TRTEYRLIVENLSSRVSWQVSWFHCEDELGNHATTLTVGGAFRVQSTAVEDLKDYMRQAG 404
Query: 150 DVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
+V +A+ ++ + G+V++ + DMK A+ KLD TE
Sbjct: 405 EVTYADAHKEHKNE-GIVEFASYSDMKNAVSKLDGTEI 441
>gi|156402467|ref|XP_001639612.1| predicted protein [Nematostella vectensis]
gi|156226741|gb|EDO47549.1| predicted protein [Nematostella vectensis]
Length = 174
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 97/186 (52%), Gaps = 25/186 (13%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGR--ILDIELKIPPRPPCYCFVEFENARDAEDAI 62
S +Y+G LP RE +V+ FY YGR I +I LK Y FVEF+ + DAEDA+
Sbjct: 1 MSNRVYLGRLPYGTREDDVKKFFYTYGRFKIREIILK-----DGYGFVEFDYSDDAEDAV 55
Query: 63 RGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRH 122
+G G R+ VE A G S +GGY G G A ++G
Sbjct: 56 YECNGKKMLGERILVEPARGTS---------KGGYSSGRRGRA--------RDKYGPPLR 98
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKL 182
+ +R+ V L S SWQDLKD+ R+ GDV + + + +G GV+++ +D+K A+RKL
Sbjct: 99 TPWRMTVENLSSRVSWQDLKDYCRQIGDVTYGDAHKQKQGE-GVIEFATKKDLKKALRKL 157
Query: 183 DDTEFR 188
D E +
Sbjct: 158 DGKELK 163
>gi|157110209|ref|XP_001651001.1| arginine/serine-rich splicing factor [Aedes aegypti]
gi|108883952|gb|EAT48177.1| AAEL000769-PA [Aedes aegypti]
Length = 247
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 90/190 (47%), Gaps = 40/190 (21%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y G LP D RE ++E F +GRI +I L+ Y FVEF++ RDAEDAI +G
Sbjct: 5 VYAGKLPHDTRERDLERFFEGFGRIREILLR-----RGYAFVEFDDYRDAEDAIYELNGA 59
Query: 69 NFDGCRLRVELA-----HGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHS 123
G R+ VE GGS P R +
Sbjct: 60 KLLGQRIVVEATKRPPRFGGSSNRPKPPQR-----------------------------T 90
Query: 124 EYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLD 183
+R+IV L S W++LK +MRKAG+V FA+ RD GVV++ + DMK A++ D
Sbjct: 91 YHRLIVENLSSRIDWRELKAYMRKAGNVTFADAHRDRMNE-GVVEFASRHDMKQALKMFD 149
Query: 184 DTEFRNPWAR 193
DTE + R
Sbjct: 150 DTELNGRYIR 159
>gi|427777527|gb|JAA54215.1| Putative alternative splicing factor srp55/b52/srp75 rrm
superfamily [Rhipicephalus pulchellus]
Length = 363
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 95/179 (53%), Gaps = 19/179 (10%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L ++RE ++E F +GRI +I +K + FVEF++ RDA+DA+ +G
Sbjct: 5 VYVGRLNYEVRERDLERFFKGFGRIREISIK-----NGFGFVEFDDHRDADDAVYELNGK 59
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VELA RG G + A R+G +EY++
Sbjct: 60 ELLGDRVSVELA-------------RGIRRGADYYRSRAASRSPPRRRYGPPTRTEYQLT 106
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ R GVV++ DMK A+ KLD+T+
Sbjct: 107 VENLSSRVSWQDLKDYMRQAGEVTYADAHRLRRNE-GVVEFATYSDMKNALDKLDNTDL 164
>gi|339239261|ref|XP_003381185.1| 26S protease regulatory subunit 4 [Trichinella spiralis]
gi|316975801|gb|EFV59199.1| 26S protease regulatory subunit 4 [Trichinella spiralis]
Length = 646
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 115/216 (53%), Gaps = 14/216 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L SDIRE ++E+ F YGRI +I LK Y FVEF+ RDA+DA+ +G
Sbjct: 6 VYVGQLTSDIRENDLENFFKGYGRIREITLK-----NGYGFVEFDERRDADDAVHDLNGK 60
Query: 69 NFDGCRLRVELAHGGS---GRGPSSSDRRGGYGGG-GAGGAGGAGAGAGAGRFGISRHSE 124
G ++RVE+AH S RG Y G G + G R S
Sbjct: 61 PLLGEKIRVEMAHRFSRDRFASGRGGGFRGRYNGDRGYDRSRHGGRWERRRPVNPPRRSR 120
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDD 184
YR++V L S+ SW++LKD M +AG+VCF +V + G+V++ + M+ A++KL+
Sbjct: 121 YRLLVENLSSAISWRELKDFMNQAGEVCFTDVY--PQRREGIVEFESSSAMENALKKLNG 178
Query: 185 TEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRS 220
E R RIT ++ D + S +R+R+ + +S
Sbjct: 179 EELNG--RRIRITEEKLDSNKS-NRNRNSVMGQQQS 211
>gi|303317336|ref|XP_003068670.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240108351|gb|EER26525.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 300
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 112/220 (50%), Gaps = 31/220 (14%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDA 58
MS S +Y+GNLP ++ + +VE+ F ++G +I DI+L + F+E+E+A DA
Sbjct: 1 MSEVSSTRLYLGNLPRNVTKQDVEEHFNQHGSGKITDIKLMS-----GFGFIEYEDALDA 55
Query: 59 EDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFG 118
D + DG +F G RL V+ A RGP + G + A R
Sbjct: 56 RDVVP--DGTDFKGSRLTVQFA-----RGPRHKE-----------TFSGPSDRSNAPR-- 95
Query: 119 ISRHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKY 177
R + YR+ + GLP + SWQDLKD R++G DV ++E RD EG G V++ D+K
Sbjct: 96 -PRRTPYRMQISGLPET-SWQDLKDFARQSGLDVVYSETLRDHEGR-GFVEFETGADLKT 152
Query: 178 AIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSR 217
AI KLD EF+ ++ D P R RSRS R
Sbjct: 153 AIEKLDGREFKGSRVTCTQDIQAPDDRPVRDPYRSRSPVR 192
>gi|322792693|gb|EFZ16561.1| hypothetical protein SINV_05882 [Solenopsis invicta]
Length = 386
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 88/179 (49%), Gaps = 21/179 (11%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP RE ++E F YGR D+ +K Y FVEF++ RDA+DA+ Y
Sbjct: 59 VYVGGLPYGTRERDLERFFRGYGRFRDVLIK-----NGYGFVEFDDYRDADDAV-----Y 108
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+G L G S D R + R+G +EYR+
Sbjct: 109 ELNGKEL----------LGESRDDMRHDRDSVNRNTRTASSYKQSLPRYGPPTRTEYRLT 158
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ + GVV++ D+K AI KLDDTE
Sbjct: 159 VENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNE-GVVEFATYSDLKNAIDKLDDTEL 216
>gi|171849000|pdb|3BEG|B Chain B, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 115
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/80 (65%), Positives = 63/80 (78%), Gaps = 4/80 (5%)
Query: 111 GAGAGRFGI-SRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDY 169
GA GR+G SR SE RV+V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++
Sbjct: 2 GAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD--GT-GVVEF 58
Query: 170 TNPEDMKYAIRKLDDTEFRN 189
EDM YA+RKLD+T+FR+
Sbjct: 59 VRKEDMTYAVRKLDNTKFRS 78
>gi|47220462|emb|CAG03242.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1292
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 103/181 (56%), Gaps = 13/181 (7%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L +RE +++ F YG++++I+LK Y FVEFE+ RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGKLMEIDLKN-----GYGFVEFEDNRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGR--FGISRHSEYR 126
G R+ VE A RGP G G GG G + + + GR +G +EYR
Sbjct: 59 ELCGERVIVEHA-----RGPRRDRDFYGGGYGGGGRSSSYNSRSRTGRDKYGPPVRTEYR 113
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTE 186
++V L S SWQDLKD MR+AG+V +A+ ++ GV+++ + DMK A+ KLD T+
Sbjct: 114 LVVENLSSRCSWQDLKDFMRQAGEVTYADAHKEHTNE-GVIEFRSYSDMKRALDKLDGTD 172
Query: 187 F 187
Sbjct: 173 I 173
>gi|290562251|gb|ADD38522.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
Length = 331
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 105/187 (56%), Gaps = 5/187 (2%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M R +++GNLP +RE ++E F +YGR+ +I +K Y F EF++ RDA+D
Sbjct: 1 MPSREGCRVFLGNLPYSVRERDIERFFERYGRVYNIFIKSGK----YGFCEFDDYRDADD 56
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
A+ +G + R+ VE A GG SS GG GGGG G G G G G++G
Sbjct: 57 AVYKLNGCELNSERITVEHARGGRRAEGRSSGGSGGGGGGGYRGDRYRGRGGGRGKYGPP 116
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
+ YRVIV L + SWQDLKD MR+AG+V FA+ D GVV++ + DM+ AI
Sbjct: 117 TRTNYRVIVENLSTRVSWQDLKDVMRRAGEVTFADAHNDKRNE-GVVEFISRRDMERAID 175
Query: 181 KLDDTEF 187
K D+ E
Sbjct: 176 KFDNHEL 182
>gi|54020785|ref|NP_001005638.1| keratin 5, gene 1 [Xenopus (Silurana) tropicalis]
gi|49250524|gb|AAH74634.1| keratin 5, gene 1 [Xenopus (Silurana) tropicalis]
Length = 262
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 93/179 (51%), Gaps = 6/179 (3%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI +I LK + FVEF++ RDA+DA+ +G
Sbjct: 6 VFIGRLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
R+ +E A GRG GG G A G R+G +E+R+I
Sbjct: 61 VLCNERVTIEHARNRRGRGGMMGGGGGGGGRYPNRFAYRQSNSGGPSRYGPPVRTEHRII 120
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MRKAG+V + + R S GVV++ + DMK A+ KLD E
Sbjct: 121 VENLSSRVSWQDLKDFMRKAGEVTYVDAHR-SNRNEGVVEFASYTDMKNALDKLDGVEL 178
>gi|432864638|ref|XP_004070386.1| PREDICTED: uncharacterized protein LOC101162527 isoform 2 [Oryzias
latipes]
Length = 373
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 100/184 (54%), Gaps = 11/184 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L +RE +++ F YG++L++++K Y FVEFE+ RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGKLLEVDMK-----NGYGFVEFEDNRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHG-----GSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHS 123
G R+ VE A G G SS G + + + G ++G +
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYGGGSSWGGGRSSGYSSSSNSSSSRTRVGRDKYGPPVRT 118
Query: 124 EYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLD 183
EYR+IV L S SWQDLKD MR+AG+V +A+ ++ GV+++ + DMK A+ KLD
Sbjct: 119 EYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNQ-GVIEFRSYSDMKRALDKLD 177
Query: 184 DTEF 187
T+
Sbjct: 178 GTDI 181
>gi|336367304|gb|EGN95649.1| hypothetical protein SERLA73DRAFT_186792 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380022|gb|EGO21176.1| hypothetical protein SERLADRAFT_441550 [Serpula lacrymans var.
lacrymans S7.9]
Length = 324
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 96/197 (48%), Gaps = 30/197 (15%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELK-------------IPPRPPCYCFVE 51
+R +Y+G LP D R +V F YGRI+D + + + FVE
Sbjct: 1 MARRLYLGRLPPDARSDDVAKFFDGYGRIVDCRVMTGSSDKRRSANPGLTAPSSGFGFVE 60
Query: 52 FENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAG 111
FEN++DAEDA+ +G F G + VE A S RR Y GGG G G A +
Sbjct: 61 FENSKDAEDAVHHFNGKPFMGVNIVVEFAK-------ESRPRRDVYEGGGERGFGSARS- 112
Query: 112 AGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTN 171
R R+IV G+ SWQDLKD R+AG V FA++ RD G G+++Y +
Sbjct: 113 --------RRPPGIRLIVSGISRDTSWQDLKDFGREAGSVSFADIDRDFPGQ-GILEYLS 163
Query: 172 PEDMKYAIRKLDDTEFR 188
+D A++ LD + R
Sbjct: 164 RDDADRAVKDLDGKDLR 180
>gi|47221305|emb|CAG13241.1| unnamed protein product [Tetraodon nigroviridis]
Length = 315
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 97/179 (54%), Gaps = 10/179 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G+L RE +VE F YGRI +I LK + FVEF++ RDA+DA+ +G
Sbjct: 6 VFIGHLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
C RV + H S R G GG GG G + + R+G +E+R+I
Sbjct: 61 EL--CSERVTIEHARSRR--GRGGGPGMGRFGGGGGGGYRPSRSSGPRYGPPVRTEHRLI 116
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MRKAG+V F + R ++ GVV++ + DMK AI K D TE
Sbjct: 117 VENLSSRISWQDLKDMMRKAGEVTFVDAHRPNKNE-GVVEFASRSDMKSAISKFDGTEL 174
>gi|290562259|gb|ADD38526.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
Length = 195
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 94/179 (52%), Gaps = 15/179 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP+D ++ D+F KY D++LK + F+EF+ RDA+ A+ DG
Sbjct: 19 VYVGGLPTDTSRSDIRDIFSKYRDRFDMKLKTR-----FAFIEFDYHRDADHAVDNLDGL 73
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
F G R+ VE+A RGP ++D+ GG R+G ++Y+++
Sbjct: 74 TFRGRRISVEVA-----RGPRTADKYRFKGGLNHEPV----QATWVKRYGTPEITKYKIL 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V+ L + WQDLKD M+KAG V +A +++ G+V ++N E M AI +D +
Sbjct: 125 VKNLSTRIEWQDLKDLMKKAGTVTYALAHKNNMHE-GMVCFSNEEGMLKAIDIFNDYDL 182
>gi|149063568|gb|EDM13891.1| splicing factor, arginine/serine rich 9, isoform CRA_a [Rattus
norvegicus]
Length = 124
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 63/85 (74%), Gaps = 2/85 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+D+RE ++EDLFYKYGRI +IELK + FV FE+ RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGCRLRVEL--AHGGSGRGPSSS 91
++ CRLRVE A+GG G P +S
Sbjct: 76 DYGQCRLRVEFPRAYGGRGGWPRAS 100
>gi|225718228|gb|ACO14960.1| Serine-arginine protein 55 [Caligus clemensi]
Length = 355
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 95/188 (50%), Gaps = 13/188 (6%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M R +++GNLP +RE ++E F +YGR+ +I +K Y F EF++ RDA+D
Sbjct: 1 MPSREGSRVFLGNLPYSVRERDIERFFERYGRVYNIFIK----SGKYGFCEFDDYRDADD 56
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
A+ +G +G R+ VE H GR G GG G R
Sbjct: 57 AVYKLNGGELNGERITVE--HARGGRRAEGRGGGFRGDRNRGRGVGGRGKYGPPTR---- 110
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
+ YRVIV L S SWQDLKD MR+AG+V FA+ D GVV++ + DM AI
Sbjct: 111 --TNYRVIVENLSSRVSWQDLKDVMRRAGEVTFADAHNDRRNE-GVVEFISRRDMDRAIE 167
Query: 181 KLDDTEFR 188
K D+ E +
Sbjct: 168 KFDNHELQ 175
>gi|89273959|emb|CAJ82241.1| splicing factor, arginine/serine-rich 5 [Xenopus (Silurana)
tropicalis]
Length = 261
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 94/193 (48%), Gaps = 35/193 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI +I LK + FVEF++ RDA+DA+ Y
Sbjct: 6 VFIGRLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAV-----Y 55
Query: 69 NFDG---CRLRVELAHGGSGRGPSSSD-----------RRGGYGGGGAGGAGGAGAGAGA 114
+G C RV + H + RG R Y +GG
Sbjct: 56 ELNGKVLCNERVTIEHARNRRGRGGMMGGGGGGGGRYPNRFAYRQSNSGGP--------- 106
Query: 115 GRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPED 174
R+G +E+R+IV L S SWQDLKD MRKAG+V + + R S GVV++ + D
Sbjct: 107 -RYGPPVRTEHRIIVENLSSRVSWQDLKDFMRKAGEVTYVDAHR-SNRNEGVVEFASYTD 164
Query: 175 MKYAIRKLDDTEF 187
MK A+ KLD E
Sbjct: 165 MKNALDKLDGVEL 177
>gi|313227405|emb|CBY22552.1| unnamed protein product [Oikopleura dioica]
Length = 318
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 101/227 (44%), Gaps = 58/227 (25%)
Query: 3 GRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAI 62
G++ ++++G LP +R +++D F YGRI+DI +K Y FVEFE+ RDA DA+
Sbjct: 2 GKYGFSVWMGGLPERVRSRDIDDFFKGYGRIVDISIKTK-----YAFVEFEDERDAADAV 56
Query: 63 RGRDGYNFDGCRLRVELAHG------------------------------------GSGR 86
+ D +G R+R+E++ G G GR
Sbjct: 57 KDLDDQKLNGSRVRLEVSKGCKDKYRDFQRTGRVRYRSYSKSVSPGRRRHRSRSPVGKGR 116
Query: 87 GPS-----SSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDL 141
S SDRR + A ++G + + V V L S SWQDL
Sbjct: 117 SRSRSPARGSDRRETFYSKPA-----------YKKYGAPEKTRWTVEVDNLSSRCSWQDL 165
Query: 142 KDHMRKAGDVCFAEVSRDSEG-TYGVVDYTNPEDMKYAIRKLDDTEF 187
KD MRKAG+V + + G GVV Y +D K AI +LD EF
Sbjct: 166 KDFMRKAGEVTYGDAHGSDIGRNRGVVCYEREDDAKRAIEELDGREF 212
>gi|348517719|ref|XP_003446380.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Oreochromis
niloticus]
Length = 293
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 93/179 (51%), Gaps = 9/179 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
I++G L RE +VE F YGRI DI+LK + FVEF++ RDAEDA+ DG
Sbjct: 6 IFIGRLSPSAREKDVERFFKGYGRIRDIDLKR-----GFGFVEFDDPRDAEDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
C RV + H R R GG GGG G G+ R +E R+I
Sbjct: 61 EL--CNERVTIEHA-RVRLRGGRGRGGGGGGGRFSDRYGRGSQNSRSRNPPPMRTENRLI 117
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MR+AG+V FA+ R + GVV++ + D+K A+ KL E
Sbjct: 118 VENLSSRVSWQDLKDFMRQAGEVTFADAHR-PKLNEGVVEFASHSDLKNALDKLSGKEI 175
>gi|410916817|ref|XP_003971883.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Takifugu
rubripes]
Length = 310
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 91/179 (50%), Gaps = 11/179 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
I++G L RE +VE F YGRI DI+LK + FVEF++ RDAEDA+ DG
Sbjct: 6 IFIGRLSPTAREKDVERFFKGYGRIRDIDLK-----KGFGFVEFDDPRDAEDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
C RV + H R GGG G G+ + R +E R+I
Sbjct: 61 EL--CNERVTIEHARVR---LRGGRGRRPGGGRFSDRYGRGSQSSRSRNPPPVRTENRLI 115
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MR+AG+V FA+ R + GVV++ + D+K A+ KL E
Sbjct: 116 VENLSSRVSWQDLKDFMRQAGEVTFADAHR-PKLNEGVVEFASYSDLKNALEKLSGKEM 173
>gi|409082207|gb|EKM82565.1| hypothetical protein AGABI1DRAFT_111169 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200034|gb|EKV49958.1| hypothetical protein AGABI2DRAFT_190388 [Agaricus bisporus var.
bisporus H97]
Length = 289
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 92/184 (50%), Gaps = 25/184 (13%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
SR +Y+G LP D R +V+ F +GRI+D + + FVEFE+ +DAE+A+
Sbjct: 1 MSRRLYLGRLPPDARSEDVQKFFDGFGRIIDCRVMT-----GFGFVEFESPKDAEEAVHT 55
Query: 65 RDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
+G +F G + VE A R + RG G A R
Sbjct: 56 FNGKSFMGANIVVEFAKESRPRREPYENERG--------------HGPRA-----RRPPG 96
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDD 184
R++V G+ SWQDLKD R AG V FA++ R+S G GV++Y N ED A+R+LD
Sbjct: 97 IRLVVTGVSRDTSWQDLKDFGRDAGSVSFADIDRESPGQ-GVLEYLNREDADRAVRELDG 155
Query: 185 TEFR 188
E R
Sbjct: 156 KELR 159
>gi|90076960|dbj|BAE88160.1| unnamed protein product [Macaca fascicularis]
Length = 182
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/76 (65%), Positives = 61/76 (80%), Gaps = 4/76 (5%)
Query: 115 GRFGI-SRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPE 173
GR+G SR SE RV+V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ E
Sbjct: 39 GRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD--GT-GVVEFVRKE 95
Query: 174 DMKYAIRKLDDTEFRN 189
DM YA+RKLD+T+FR+
Sbjct: 96 DMTYAVRKLDNTKFRS 111
>gi|226467223|emb|CAX76092.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 372
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 97/179 (54%), Gaps = 10/179 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG +P E ++E F YGR+ DI LK Y FVEF+N +DA+DA+ G
Sbjct: 4 VYVGRIPPRCTERDIERFFKGYGRLRDIVLK-----NGYGFVEFDNEKDADDAVYDLHGR 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G RL VE A P + GGGG GG GG G R+G +EYRVI
Sbjct: 59 DLRGERLIVEHAR----LPPGTRGGSRRAGGGGGGGGGGGGGSGRDRRYGPPTRTEYRVI 114
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MRKAG+V +A+ + ++ G+V++ DMK AI K D E
Sbjct: 115 VENLSSRVSWQDLKDLMRKAGEVTYADAHKSAKND-GIVEFAAYADMKEAIEKFDGYEL 172
>gi|226467219|emb|CAX76090.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 372
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 97/179 (54%), Gaps = 10/179 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG +P E ++E F YGR+ DI LK Y FVEF+N +DA+DA+ G
Sbjct: 4 VYVGRIPPRCTERDIERFFKGYGRLRDIVLK-----NGYGFVEFDNEKDADDAVYDLHGR 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G RL VE A P + GGGG GG GG G R+G +EYRVI
Sbjct: 59 DLRGERLIVEHAR----LPPGTRGGSRRAGGGGGGGGGGGGGSGRDRRYGPPTRTEYRVI 114
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MRKAG+V +A+ + ++ G+V++ DMK AI K D E
Sbjct: 115 VENLSSRVSWQDLKDLMRKAGEVTYADAHKSAKND-GIVEFAAYADMKEAIEKFDGYEL 172
>gi|158429186|pdb|2O3D|A Chain A, Structure Of Human Sf2ASF RNA RECOGNITION MOTIF 2 (RRM2)
Length = 113
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/76 (65%), Positives = 61/76 (80%), Gaps = 4/76 (5%)
Query: 115 GRFGI-SRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPE 173
GR+G SR SE RV+V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ E
Sbjct: 5 GRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD--GT-GVVEFVRKE 61
Query: 174 DMKYAIRKLDDTEFRN 189
DM YA+RKLD+T+FR+
Sbjct: 62 DMTYAVRKLDNTKFRS 77
>gi|226467221|emb|CAX76091.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 372
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 97/179 (54%), Gaps = 10/179 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG +P E ++E F YGR+ DI LK Y FVEF+N +DA+DA+ G
Sbjct: 4 VYVGRIPPRCTERDIERFFKGYGRLRDIVLK-----NGYGFVEFDNEKDADDAVYDLHGR 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G RL VE A P + GGGG GG GG G R+G +EYRVI
Sbjct: 59 DLRGERLIVEHAR----LPPGTRGGSRRAGGGGGGGGGGGGGSGRDRRYGPPTRTEYRVI 114
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MRKAG+V +A+ + ++ G+V++ DMK AI K D E
Sbjct: 115 VENLSSRVSWQDLKDLMRKAGEVTYADAHKSAKND-GIVEFAAYADMKEAIEKFDGYEL 172
>gi|119628062|gb|EAX07657.1| splicing factor, arginine/serine-rich 4, isoform CRA_a [Homo
sapiens]
Length = 484
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 87/150 (58%), Gaps = 12/150 (8%)
Query: 38 LKIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGY 97
L++ P Y FVEF++ RDA+DA+ +G + G R+ VE A RGP RR G
Sbjct: 18 LEVLHPAPRYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHA-----RGP----RRDGS 68
Query: 98 GGGGAGGAGGAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVS 157
G G G G +G ++G +EYR+IV L S SWQDLKD+MR+AG+V +A+
Sbjct: 69 YGSGRSGYGYRRSGRD--KYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAH 126
Query: 158 RDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
+ + GV+++ + DMK A+ KLD TE
Sbjct: 127 KGRKNE-GVIEFVSYSDMKRALEKLDGTEV 155
>gi|432898455|ref|XP_004076510.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Oryzias
latipes]
Length = 222
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/71 (66%), Positives = 55/71 (77%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR +VEDLFYKYG I DI+LK P + FV+FE+ RDAEDA+ GRDGY
Sbjct: 17 IYVGNLPPDIRSKDVEDLFYKYGSIRDIDLKNRRGGPPFAFVQFEDPRDAEDAVYGRDGY 76
Query: 69 NFDGCRLRVEL 79
++DG RLRVE
Sbjct: 77 DYDGYRLRVEF 87
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 30/38 (78%), Gaps = 3/38 (7%)
Query: 152 CFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFRN 189
C+A+V RD GT GVV++ EDM YA+RKLD+T+FR+
Sbjct: 114 CYADVFRD--GT-GVVEFVRKEDMTYAVRKLDNTKFRS 148
>gi|147907282|ref|NP_001079543.1| keratin 5, gene 1 b [Xenopus laevis]
gi|28278124|gb|AAH44085.1| MGC52712 protein [Xenopus laevis]
Length = 261
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 93/182 (51%), Gaps = 14/182 (7%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI +I LK + FVEF++ RDA+DA+ Y
Sbjct: 6 VFIGRLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAV-----Y 55
Query: 69 NFDG---CRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
+G C RV + H + RG GG G A G R+G +E+
Sbjct: 56 ELNGKVLCSERVTIEHARNHRGRGGMMGGGGGGRYPNRFAYRQSNSGGNSRYGPPVRTEH 115
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
R+IV L S SWQDLK MRKAG+V + + R S GVV++ + DMK A+ KLD
Sbjct: 116 RIIVENLSSRVSWQDLKGFMRKAGEVTYVDAHR-SNRNEGVVEFASYTDMKSALDKLDGV 174
Query: 186 EF 187
E
Sbjct: 175 EL 176
>gi|159163317|pdb|1WG4|A Chain A, Solution Structure Of Rrm Domain In Protein Bab31986
Length = 98
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 57/70 (81%), Gaps = 3/70 (4%)
Query: 120 SRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAI 179
+R S++RV+V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y EDM+YA+
Sbjct: 11 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYAL 67
Query: 180 RKLDDTEFRN 189
RKLDDT+FR+
Sbjct: 68 RKLDDTKFRS 77
>gi|225712990|gb|ACO12341.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
gi|290462763|gb|ADD24429.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
gi|290562097|gb|ADD38445.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
Length = 250
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 97/181 (53%), Gaps = 8/181 (4%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNLP ++RE +VE LF +YGRI ++ +K Y FVEF++ RDA+D + DG
Sbjct: 7 VYVGNLPENVRERDVEKLFKEYGRIREVVIK-----SGYGFVEFDDPRDADDVVNDMDGK 61
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS--RHSEYR 126
F G R+RVE+A R DR GGG GG GR G + YR
Sbjct: 62 EFQGGRVRVEMARDPRERRGRDRDRGYERRGGGGGGYDRRDTRGDRGRRGNPPGPRTNYR 121
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTE 186
+ V+ L S SWQDLKD+ R AG++ + +G GVV++ + + YAI D+ E
Sbjct: 122 ITVQNLSSRTSWQDLKDYFRAAGEITYTNAHTPRQGE-GVVEFASSRGLDYAIDHQDELE 180
Query: 187 F 187
Sbjct: 181 L 181
>gi|226471686|emb|CAX70924.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 371
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 99/179 (55%), Gaps = 11/179 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG +P E ++E F YGR+ DI LK Y FVEF+N +DA+DA+ G
Sbjct: 4 VYVGRIPPRCTERDIERFFKGYGRLRDIVLK-----NGYGFVEFDNEKDADDAVYDLHGR 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G RL VE A R P + GGG GG GG G G+G R+G +EYRVI
Sbjct: 59 DLRGERLIVEHA-----RLPPGTRGGSRRAGGGGGGGGGGGGGSGRDRYGPPTRTEYRVI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD RKAG+V +A+ + ++ G+V++ DMK AI K D E
Sbjct: 114 VENLSSRVSWQDLKDLTRKAGEVTYADAHKSAKND-GIVEFAAYADMKEAIEKFDGYEL 171
>gi|67537616|ref|XP_662582.1| hypothetical protein AN4978.2 [Aspergillus nidulans FGSC A4]
gi|40741866|gb|EAA61056.1| hypothetical protein AN4978.2 [Aspergillus nidulans FGSC A4]
gi|259482149|tpe|CBF76354.1| TPA: pre-RNA splicing factor Srp2, putative (AFU_orthologue;
AFUA_3G10100) [Aspergillus nidulans FGSC A4]
Length = 296
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 120/247 (48%), Gaps = 35/247 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP ++ + ++E+ F +G +I +I+L + F+E+E+A DA D +
Sbjct: 9 LYLGNLPRNVTKQDIEEHFSTHGTGKITEIKLMN-----GFGFIEYEDAMDARDIVPAFH 63
Query: 67 GYNFDGCRLRVELAHGGSGRG--PSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
G +F G RL V+ A G + P +DR R +
Sbjct: 64 GSDFKGERLTVQFARGPRRKENFPVPTDRPN---------------------LPRPRRTI 102
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLD 183
+R+I+ GLP + SWQDLKD R++G DV ++E R E G+V++ D+K A+ KLD
Sbjct: 103 FRMIISGLPET-SWQDLKDFARQSGLDVVYSETGR--EPGRGIVEFETANDLKTAVEKLD 159
Query: 184 DTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRSRIVRRNRSKSLERSVS-RSVSRS 242
EF+ ++ YD P R RSRS R + +R S+ R S RS R
Sbjct: 160 GREFKGTRVTCVPDIQPYDDRPYRDPYRSRSPRRGYPPMDEYDRRYSVPRGYSPRSHYRE 219
Query: 243 MSASPVK 249
S P++
Sbjct: 220 RSPIPMR 226
>gi|432882993|ref|XP_004074180.1| PREDICTED: uncharacterized protein LOC101163182 isoform 4 [Oryzias
latipes]
Length = 344
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 91/179 (50%), Gaps = 41/179 (22%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ Y
Sbjct: 4 VYIGRLSYRAREKDVERFFKGYGKILEVDLKN-----GYGFVEFDDPRDADDAV-----Y 53
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ +G L GYG G G R+G ++YR+I
Sbjct: 54 DLNGKEL-------------------CGYGRWG-----------GRDRYGPPVRTDYRLI 83
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ + GV+++ DMK A+ KLD TE
Sbjct: 84 VENLSSRCSWQDLKDYMRQAGEVTYADTHKGRRNE-GVIEFRQYSDMKRALEKLDGTEV 141
>gi|389748594|gb|EIM89771.1| hypothetical protein STEHIDRAFT_128672 [Stereum hirsutum FP-91666
SS1]
Length = 276
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 90/184 (48%), Gaps = 28/184 (15%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
SR +Y+G LP+D R +V F YG+I+D + + FVEFE++RDAEDA+
Sbjct: 1 MSRRLYLGRLPTDARTDDVSKFFEGYGKIVDCRVMT-----GFGFVEFESSRDAEDALNH 55
Query: 65 RDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
+G F G L VE A R DR A R R
Sbjct: 56 FNGKPFMGTNLVVEFAKESRPRRDPYDDR------------------APRAR----RPPG 93
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDD 184
R+IV G+ SWQDLKD R+AG V FA++ RD G GV++Y ED + A++ LD
Sbjct: 94 IRIIVSGISRDTSWQDLKDFGREAGSVSFADIERDVPGQ-GVLEYLAREDAERAVKDLDG 152
Query: 185 TEFR 188
+ R
Sbjct: 153 KDLR 156
>gi|225714068|gb|ACO12880.1| Splicing factor, arginine/serine-rich 4 [Lepeophtheirus salmonis]
gi|290462833|gb|ADD24464.1| Splicing factor, arginine/serine-rich 4 [Lepeophtheirus salmonis]
Length = 233
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 101/189 (53%), Gaps = 19/189 (10%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M G R +Y+GN+ D RE +VE F YG++ ++ LK Y FVEFE+ RDA+D
Sbjct: 1 MPGNHHR-LYLGNISDDTRERDVEKFFKGYGKLREVALK-----NGYGFVEFEDHRDADD 54
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
A++ DG + +G R+RVE A R P R Y + G G G
Sbjct: 55 AVQDLDGKDMNGSRVRVEFA-----RSPREK-RNSRYQSRRSPPRGRRGPPMKRNPPG-- 106
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCF--AEVSRDSEGTYGVVDYTNPEDMKYA 178
R ++YR+ V L + SWQDLKD+ R G++ + A R++E GVV++ + M+ A
Sbjct: 107 RRTQYRIRVENLSTRTSWQDLKDYFRSCGEITYTNAHKPRNNE---GVVEFGDKRAMENA 163
Query: 179 IRKLDDTEF 187
+ +LDDT+
Sbjct: 164 LDRLDDTDL 172
>gi|225712350|gb|ACO12021.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
gi|290463073|gb|ADD24584.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
Length = 195
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 93/179 (51%), Gaps = 15/179 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP+D + D+F KY D++LK + F+EF+ RDA+ A+ DG
Sbjct: 19 VYVGGLPTDTSRSGIRDIFSKYRDRFDMKLKTR-----FAFIEFDYHRDADHAVDNLDGL 73
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
F G R+ VE+A RGP ++D+ GG R+G ++Y+++
Sbjct: 74 TFRGRRISVEVA-----RGPRTADKYRFKGGLNHEPV----QATWVKRYGTPEITKYKIL 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V+ L + WQDLKD M+KAG V +A +++ G+V ++N E M AI +D +
Sbjct: 125 VKNLSTRIEWQDLKDLMKKAGTVTYALAHKNNMHE-GMVCFSNEEGMLKAIDIFNDYDL 182
>gi|291224547|ref|XP_002732263.1| PREDICTED: splicing factor, arginine/serine-rich 4-like
[Saccoglossus kowalevskii]
Length = 261
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 102/190 (53%), Gaps = 22/190 (11%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F +G + ++ LK + FVEF++ RDA+DA+ +G
Sbjct: 5 VYIGRLSYQTRERDVERFFRGFGHLREVNLK-----NGFGFVEFDDPRDADDAVYELNGK 59
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDR-RGGYGGG----------GAGGAGGAGAGAGAGRF 117
+ G R+ +E A RGP DR GGY G G G G G G ++
Sbjct: 60 DLCGERVIIEHA-----RGPVRRDRDSGGYRGSERDYRGDRGGGYGPPRRRGGGGGIDKY 114
Query: 118 GISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKY 177
G ++ R+IV L S SWQDLKD+MR+AG+V +A+ ++ + GVV++ DMK
Sbjct: 115 GPPTRTDNRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKEHKNE-GVVEFATYSDMKN 173
Query: 178 AIRKLDDTEF 187
A+ KLD TE
Sbjct: 174 AMSKLDGTEI 183
>gi|260819154|ref|XP_002604902.1| hypothetical protein BRAFLDRAFT_114372 [Branchiostoma floridae]
gi|229290231|gb|EEN60912.1| hypothetical protein BRAFLDRAFT_114372 [Branchiostoma floridae]
Length = 289
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 100/182 (54%), Gaps = 9/182 (4%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G LP RE +VE F YGRI +I LK + FVEF++ RDA+DA+ +G
Sbjct: 5 VYIGRLPYHAREKDVERFFRGYGRIREINLK-----NGFGFVEFDDPRDADDAVYELNGK 59
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGG---GGAGGAGGAGAGAGAGRFGISRHSEY 125
G R+ VE A G + G GY G+GG R+G ++Y
Sbjct: 60 ELCGERVIVENARGPARGGGGFRGGGYGYRPGWLDNGRGSGGGRGSDSRNRYGPPVRTDY 119
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
R+IV L S SWQDLKD+MR+AG+V +A+ + ++ G+V++ DM+ A+RKLD T
Sbjct: 120 RLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKQNKNE-GIVEFATYRDMENALRKLDGT 178
Query: 186 EF 187
E
Sbjct: 179 EI 180
>gi|221130960|ref|XP_002164119.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Hydra magnipapillata]
Length = 264
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 100/182 (54%), Gaps = 22/182 (12%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
I+VG L + R ++E+ F G R+ D+ +K+ Y FVEFE+ RDA+DA+ D
Sbjct: 12 IFVGRLNPEARVRDLENFFKDNGFSRLKDVNIKL-----GYAFVEFEDKRDADDAVYELD 66
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDR-RGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
F G R+ VE A G + G + +R RGGY + G GR ++E+
Sbjct: 67 RKEFFGSRITVEHATGTARGGDTRGERDRGGY----------SVRERGRGR---PYNTEW 113
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
R+IV L S W DLKD+ R AG+V F + +++ G GVV++ + +MK A++K D +
Sbjct: 114 RLIVTNLSSRVGWMDLKDYFRSAGEVTFTKANKERVGE-GVVEFRSYREMKRALKKFDGS 172
Query: 186 EF 187
EF
Sbjct: 173 EF 174
>gi|68066368|ref|XP_675167.1| pre-mRNA splicing factor [Plasmodium berghei strain ANKA]
gi|56494193|emb|CAH97347.1| pre-mRNA splicing factor, putative [Plasmodium berghei]
Length = 457
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 87/179 (48%), Gaps = 27/179 (15%)
Query: 30 YGRI--LDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRG 87
+GRI +DI+L Y FV + + +DAE AI RDGY FDG RLRVE SG
Sbjct: 1 FGRIKYIDIKLTRGSTSTAYAFVHYYDIKDAEYAIERRDGYKFDGERLRVEF----SGEN 56
Query: 88 PSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRK 147
S G Y G G +E+R+IV LP + WQ LKD MR+
Sbjct: 57 KSF----GKYRRKEDG-------------IGPPLRTEHRIIVSNLPDNCKWQHLKDIMRQ 99
Query: 148 AGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPS 206
GDV +A + E G+V++ + + M YAI K D EF+ I V+R RS S
Sbjct: 100 CGDVGYANI----EHGKGIVEFVDRDGMLYAIEKFDRAEFKVHDQVTNIKVRRDKRSLS 154
>gi|95007448|emb|CAJ20669.1| splicing factor, putative [Toxoplasma gondii RH]
Length = 216
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 74/143 (51%), Gaps = 20/143 (13%)
Query: 46 CYCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGA 105
CY FVEFE R AEDA+ R GY + G LRVE + RR G
Sbjct: 73 CYAFVEFETIRAAEDAVACRHGYLYRGRSLRVEFT--------AQPARRLGSNPNFIPMG 124
Query: 106 GGAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYG 165
G +G R + +R +V LP WQ LKDHMR+AG V FAEV S G G
Sbjct: 125 GASGP---------PRRTGFRALVSFLPPGCRWQHLKDHMRRAGPVGFAEVL--SHGR-G 172
Query: 166 VVDYTNPEDMKYAIRKLDDTEFR 188
VV++ + ED+KYA+R LD +E R
Sbjct: 173 VVEFEHAEDLKYAVRSLDKSEMR 195
>gi|384498124|gb|EIE88615.1| hypothetical protein RO3G_13326 [Rhizopus delemar RA 99-880]
Length = 429
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 87/180 (48%), Gaps = 52/180 (28%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+GNLP ++ + E+E +F Y + E+ + R + FVEF+N DA+DAI
Sbjct: 188 VYLGNLPVNVSKSEIESVFKNYNPV---EVTLKER---FGFVEFDNKVDADDAIHD---- 237
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
HG G S +R YRV+
Sbjct: 238 -----------LHGTKVSGSSREER------------------------------SYRVV 256
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
++ LP +WQD+KD MRKAG V FA+V +D +G GVV++ +DMKYA+R+LDD +
Sbjct: 257 IKNLPPRTTWQDVKDFMRKAGRVVFADVLKDCDGE-GVVEFAQYDDMKYALRELDDKKLN 315
>gi|149053808|gb|EDM05625.1| rCG34610, isoform CRA_d [Rattus norvegicus]
Length = 181
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/69 (68%), Positives = 56/69 (81%), Gaps = 3/69 (4%)
Query: 120 SRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAI 179
SR SE RV+V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ EDM YA+
Sbjct: 49 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD--GT-GVVEFVRKEDMTYAV 105
Query: 180 RKLDDTEFR 188
RKLD+T+FR
Sbjct: 106 RKLDNTKFR 114
Score = 43.5 bits (101), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 18/25 (72%), Positives = 21/25 (84%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRI 33
IYVGNLP DIR ++ED+FYKYG I
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAI 42
>gi|432882987|ref|XP_004074177.1| PREDICTED: uncharacterized protein LOC101163182 isoform 1 [Oryzias
latipes]
Length = 372
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 95/179 (53%), Gaps = 17/179 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYRAREKDVERFFKGYGKILEVDLK-----NGYGFVEFDDPRDADDAVYDLNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE G G GG G G G R+G ++YR+I
Sbjct: 59 ELCGERVIVEHTKGPRRDGGYGG-----------GGRSGYGRWGGRDRYGPPVRTDYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ + GV+++ DMK A+ KLD TE
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADTHKGRRNE-GVIEFRQYSDMKRALEKLDGTEV 165
>gi|226467225|emb|CAX76093.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 372
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 97/179 (54%), Gaps = 10/179 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG +P E ++E F YGR+ DI LK Y FVEF+N +DA+DA+ G
Sbjct: 4 VYVGRIPPRCTERDIERFFKGYGRLRDIVLK-----NGYGFVEFDNEKDADDAVYDLHGR 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G RL VE A P + GGGG GG GG G R+G +EYRVI
Sbjct: 59 DLRGERLIVEHAR----LPPGTRGGSRRAGGGGGGGGGGGGGSGRDRRYGPPTRTEYRVI 114
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQ+LKD MRKAG+V +A+ + ++ G+V++ DMK AI K D E
Sbjct: 115 VENLSSRVSWQELKDLMRKAGEVTYADAHKSAKND-GIVEFAAYADMKEAIEKFDGYEL 172
>gi|296412014|ref|XP_002835723.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629512|emb|CAZ79880.1| unnamed protein product [Tuber melanosporum]
Length = 342
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 103/191 (53%), Gaps = 25/191 (13%)
Query: 1 MSGRFSRT-IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAE 59
M+ +S T +Y+GNL D R+ EVED F ++G +E+K+ + F+++++ DA+
Sbjct: 1 MANEYSGTRLYLGNLHKDARKQEVEDFFKEHGSGNVVEIKLMN---GFGFIQYDSEADAK 57
Query: 60 DAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGR-FG 118
D + G +F G L V+ A G S P D GG A R F
Sbjct: 58 DVVPAYHGRDFKGQPLTVQFARG-SRHNPRHHDFPGG-----------------ADRTFP 99
Query: 119 ISRHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKY 177
R + +R+ + GL SWQDLKD RK+G DV F+EV+R+ +G G+V++ +D++
Sbjct: 100 RPRRTAFRMNISGLNPDTSWQDLKDFARKSGSDVVFSEVTRERDGR-GMVEFETHDDLRR 158
Query: 178 AIRKLDDTEFR 188
A+ LD TEF+
Sbjct: 159 AVAFLDRTEFK 169
>gi|321472329|gb|EFX83299.1| hypothetical protein DAPPUDRAFT_195083 [Daphnia pulex]
Length = 221
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 98/179 (54%), Gaps = 7/179 (3%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G LP ++E ++E F YG++ ++ +K Y FVEFE+ RDA+DA+ +G
Sbjct: 5 VYIGGLPYRVKERDIERFFRGYGKLREVLIK-----NGYGFVEFEDYRDADDAVYELNGK 59
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A G RG + G+ + A R+G ++YR++
Sbjct: 60 ELCGERVSVEHARGSGRRGGRDDRNDRDHRDRGSRRSNWMDNNAPP-RYGPPTRTDYRLV 118
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+MR+AG+V +A+ + GVV++ + D+K AI KLD T+
Sbjct: 119 VENLSSRVSWQDLKDYMRQAGEVTYADAHKQHRNE-GVVEFASYSDLKTAIEKLDGTDL 176
>gi|256077392|ref|XP_002574989.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|353229591|emb|CCD75762.1| putative arginine/serine-rich splicing factor [Schistosoma mansoni]
Length = 370
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 98/179 (54%), Gaps = 14/179 (7%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG +P E ++E F YGR+ DI LK Y FVEF+N +DA+DA+ G
Sbjct: 4 VYVGRIPPRCTERDIERFFKGYGRLRDIVLK-----NGYGFVEFDNEKDADDAVYDLHGR 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G RL VE A R P + G GG GG G G+G R+G +EYRVI
Sbjct: 59 DLRGERLIVEHA-----RLPPGT---RGGSRRAGGGGGGGGGGSGRDRYGPPTRTEYRVI 110
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MRKAG+V +A+ + ++ G+V++ DMK AI K D E
Sbjct: 111 VENLSSRVSWQDLKDLMRKAGEVTYADAHKSAKND-GIVEFAAYADMKEAIEKFDGYEL 168
>gi|242782227|ref|XP_002479958.1| electron transfer flavoprotein-ubiquinone oxidoreductase
[Talaromyces stipitatus ATCC 10500]
gi|218720105|gb|EED19524.1| electron transfer flavoprotein-ubiquinone oxidoreductase
[Talaromyces stipitatus ATCC 10500]
Length = 1100
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 111/223 (49%), Gaps = 33/223 (14%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLF--YKYGRILDIELKIPPRPPCYCFVEFENARDA 58
MS S +Y+GNLP ++ + ++E+ F + G+I +I+L + F+E+E+A DA
Sbjct: 796 MSEVSSTRLYLGNLPRNVTKKDIEEYFGSHGTGKITEIKLMN-----GFGFIEYEDAMDA 850
Query: 59 EDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFG 118
D + G +F G RL V+ A RGP + G A R
Sbjct: 851 RDVVPAFHGSDFKGERLTVQFA-----RGPRHKET-----------FNGPSDRPAAPR-- 892
Query: 119 ISRHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKY 177
R + +R+ V GLP+ SWQDLKD R++G DV ++E +R+ +G G V++ + D+K
Sbjct: 893 -PRRTVFRMQVSGLPTETSWQDLKDFARQSGLDVVYSETTRERDGR-GFVEFESHADLKT 950
Query: 178 AIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRS 220
A+ KLD E +G D P+ R+ R RSRS
Sbjct: 951 AVEKLDGREL-----KGSQVTCVADVQPAEERAPYRDPYRSRS 988
>gi|345315998|ref|XP_001512981.2| PREDICTED: hypothetical protein LOC100082305, partial
[Ornithorhynchus anatinus]
Length = 393
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 86/147 (58%), Gaps = 18/147 (12%)
Query: 44 PPCYCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAG 103
P Y FVEF++ RDA+DA+ +G + G R+ VE A RGP R G YG
Sbjct: 23 PVWYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHA-----RGPR---RDGSYG----- 69
Query: 104 GAGGAGAG---AGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDS 160
+G +G G +G ++G +EYR+IV L S SWQDLKD+MR+AG+V +A+ +
Sbjct: 70 -SGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGR 128
Query: 161 EGTYGVVDYTNPEDMKYAIRKLDDTEF 187
+ GV+++ + DMK A+ KLD TE
Sbjct: 129 K-NEGVIEFVSYSDMKRALEKLDGTEV 154
>gi|300123677|emb|CBK24949.2| unnamed protein product [Blastocystis hominis]
Length = 325
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 91/183 (49%), Gaps = 28/183 (15%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S+ +YVGNL + ++ LF ++G I DI +K + Y FVEF +A++A
Sbjct: 1 MSKRLYVGNLEYGVENDDLSKLFGQFGEITDIAIKDRGQGAVYAFVEFSKEEEADNAQSS 60
Query: 65 RDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
+ +F G +RVE G Y G + R G R ++
Sbjct: 61 LNSTHFMGRDIRVEYTRGLR------------YSTGDSI------------RRGPPRRTD 96
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDD 184
YR+ V LP + SWQDLKD+M + G V + ++ YGVV++ + EDMK A+RKLDD
Sbjct: 97 YRIEVTHLPHNCSWQDLKDYMSRIGPVGYCDIRH----GYGVVEFIHYEDMKRAVRKLDD 152
Query: 185 TEF 187
T+
Sbjct: 153 TKM 155
>gi|256077394|ref|XP_002574990.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|353229592|emb|CCD75763.1| putative arginine/serine-rich splicing factor [Schistosoma mansoni]
Length = 371
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 98/179 (54%), Gaps = 13/179 (7%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG +P E ++E F YGR+ DI LK Y FVEF+N +DA+DA+ G
Sbjct: 4 VYVGRIPPRCTERDIERFFKGYGRLRDIVLK-----NGYGFVEFDNEKDADDAVYDLHGR 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G RL VE A R P + RGG G GG GG G R+G +EYRVI
Sbjct: 59 DLRGERLIVEHA-----RLPPGT--RGGSRRAGGGGGGGGGGSGRDRRYGPPTRTEYRVI 111
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MRKAG+V +A+ + ++ G+V++ DMK AI K D E
Sbjct: 112 VENLSSRVSWQDLKDLMRKAGEVTYADAHKSAKND-GIVEFAAYADMKEAIEKFDGYEL 169
>gi|47087341|ref|NP_998631.1| serine/arginine-rich splicing factor 6a [Danio rerio]
gi|32822789|gb|AAH55238.1| Splicing factor, arginine/serine-rich 6a [Danio rerio]
Length = 347
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 92/179 (51%), Gaps = 39/179 (21%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L +RE +++ F YG++L+++LK Y FVEFE+ RDA+DA+ Y
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGKLLEVDLK-----NGYGFVEFEDTRDADDAV-----Y 53
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+G L G SS R G ++G +EYR+I
Sbjct: 54 ELNGKEL----------CGYSSRSR------------------TGRDKYGPPVRTEYRLI 85
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MR+AG+V +A+ ++ GV+++ + DM+ A+ KLD T+
Sbjct: 86 VENLSSRCSWQDLKDFMRQAGEVTYADAHKE-RANEGVIEFRSYSDMRRALEKLDGTDI 143
>gi|225709420|gb|ACO10556.1| Serine-arginine protein 55 [Caligus rogercresseyi]
Length = 244
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 90/179 (50%), Gaps = 12/179 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+GNLP ++RE +VE +GRI ++ +K Y FVEF++ RDA+D + DG
Sbjct: 7 VYIGNLPENVRERDVEKFLKDHGRIREVVIK-----SGYGFVEFDDPRDADDVVNDMDGK 61
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+F G R+RVE+A R G GG + + YRV+
Sbjct: 62 DFQGGRIRVEMARDPRDRRDRDRGSDRRGGFDRGRDRGGRRGNPPGPK------TNYRVV 115
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD+ R AGD+ + +G G+V++ + + + YA+ ++ E
Sbjct: 116 VENLSSRTSWQDLKDYFRAAGDITYTNAHTPRQGE-GIVEFASSKGLDYALDHQNELEL 173
>gi|22268151|gb|AAH26944.1| Sfrs4 protein [Mus musculus]
Length = 489
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 83/141 (58%), Gaps = 12/141 (8%)
Query: 47 YCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAG 106
Y FVEF++ RDA+DA+ +G + G R+ VE A RGP RR G G G G G
Sbjct: 37 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHA-----RGP----RRDGSYGSGRSGYG 87
Query: 107 GAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGV 166
+G ++G +EYR+IV L S SWQDLKD+MR+AG+V +A+ + + GV
Sbjct: 88 YRRSGRD--KYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNE-GV 144
Query: 167 VDYTNPEDMKYAIRKLDDTEF 187
+++ + DMK A+ KLD TE
Sbjct: 145 IEFVSYSDMKRALEKLDGTEV 165
>gi|56797744|ref|NP_001008732.1| serine/arginine-rich splicing factor 6b [Danio rerio]
gi|56541079|gb|AAH86820.1| Splicing factor, arginine/serine-rich 6b [Danio rerio]
Length = 355
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 101/183 (55%), Gaps = 15/183 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L +RE +++ F YG++++ +LK Y FVEFE+ RDA+DA+ +G
Sbjct: 4 VYIGKLSYHVREKDIQRFFGGYGKLMETDLK-----NGYGFVEFEDTRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGP----SSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
G R+ VE A RGP G GG + + + +G ++G +E
Sbjct: 59 ELCGERVIVEHA-----RGPRRDRDGYGGGYGGFGGRSNSGYSSRSRSGRDKYGPPVRTE 113
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDD 184
YR+IV L S SWQDLKD MR+AG+V +A+ ++ GV+++ + DM+ A+ KLD
Sbjct: 114 YRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNE-GVIEFRSHSDMRRALDKLDV 172
Query: 185 TEF 187
T+
Sbjct: 173 TDI 175
>gi|336465804|gb|EGO53969.1| hypothetical protein NEUTE1DRAFT_118022 [Neurospora tetrasperma
FGSC 2508]
gi|350287365|gb|EGZ68612.1| hypothetical protein NEUTE2DRAFT_146011 [Neurospora tetrasperma
FGSC 2509]
Length = 315
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 104/213 (48%), Gaps = 32/213 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP + +VE F +G I +I+L + F+E+++A DA D +
Sbjct: 9 LYLGNLPRHATKADVEAHFATHGTGEITEIKLMN-----GFGFIEYKDAMDARDVVPAFH 63
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G +F G RL V+ A G R GG G R + +R
Sbjct: 64 GSDFMGERLTVQFARGARHR------------------EGGPGFTHERNSQPRPRRTPHR 105
Query: 127 VIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
+ + GLP+ SWQDLKD R++G DV ++E +R+ G G V++ N D++ A+ KLD+
Sbjct: 106 MQISGLPNETSWQDLKDFARQSGLDVVYSETTRNQNGE-GFVEFENAADLRTAVEKLDNR 164
Query: 186 EFRNPWARGRITVKRYDRSPSRSRSRSRSRSRS 218
EF +G+ + P R+ R+RSRS
Sbjct: 165 EF-----KGQRVTCVANTQPDIPRNDHRARSRS 192
>gi|196007380|ref|XP_002113556.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190583960|gb|EDV24030.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 263
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/210 (37%), Positives = 113/210 (53%), Gaps = 22/210 (10%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L S +RE +VE F YG++ ++ LK + FVEF+++RDAEDA+ +
Sbjct: 4 VYLGRLNSSVRERDVEKFFRDYGKLKEVTLK-----GTFGFVEFDDSRDAEDAVYDLNNK 58
Query: 69 NFDGCRLRVELAHG---GSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
G R+ VE A GRG D R G GG GG G G AG ++Y
Sbjct: 59 ELCGDRIIVEFARNRREARGRG----DDRYGRSRGGRSSGGGGGGGPAAGYGSAPVRTDY 114
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGD--VCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLD 183
R+ + L S SWQDLKD++R D V +A+ + S G +V++ + +D++YAI+KLD
Sbjct: 115 RLYINNLSSRVSWQDLKDYIRNKTDISVSYADAHKQSVGQ-AIVEFDSKDDLRYAIKKLD 173
Query: 184 DTEFRNPWARGRITVKR---YDRSPSRSRS 210
+TE +ITV R RSP SRS
Sbjct: 174 NTEINGK----KITVSRDGGDSRSPIASRS 199
>gi|336266018|ref|XP_003347779.1| hypothetical protein SMAC_03877 [Sordaria macrospora k-hell]
gi|380091314|emb|CCC11171.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 315
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 104/213 (48%), Gaps = 32/213 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP + +VE F +G I +I+L + F+E+++A DA D +
Sbjct: 9 LYLGNLPRHATKADVEAHFATHGTGEITEIKLMN-----GFGFIEYKDAMDARDVVPAFH 63
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G +F G RL V+ A G R GG G R + +R
Sbjct: 64 GSDFMGERLTVQFARGARHR------------------EGGPGFTHERNSQPRPRRTPHR 105
Query: 127 VIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
+ + GLP+ SWQDLKD R++G DV ++E +R+ G G V++ N D++ A+ KLD+
Sbjct: 106 MQISGLPNETSWQDLKDFARQSGLDVVYSETTRNQNGE-GFVEFENAADLRTAVEKLDNR 164
Query: 186 EFRNPWARGRITVKRYDRSPSRSRSRSRSRSRS 218
EF +G+ + P R+ R+RSRS
Sbjct: 165 EF-----KGQRVTCVANTQPDIPRNDHRARSRS 192
>gi|148669916|gb|EDL01863.1| splicing factor, arginine/serine-rich 1 (ASF/SF2), isoform CRA_a
[Mus musculus]
gi|149053806|gb|EDM05623.1| rCG34610, isoform CRA_b [Rattus norvegicus]
Length = 168
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 55/71 (77%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVEL 79
++DG RLRVE
Sbjct: 78 DYDGYRLRVEF 88
>gi|432882991|ref|XP_004074179.1| PREDICTED: uncharacterized protein LOC101163182 isoform 3 [Oryzias
latipes]
Length = 388
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 95/178 (53%), Gaps = 17/178 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYRAREKDVERFFKGYGKILEVDLK-----NGYGFVEFDDPRDADDAVYDLNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE G G GG G G G R+G ++YR+I
Sbjct: 59 ELCGERVIVEHTKGPRRDGGYGG-----------GGRSGYGRWGGRDRYGPPVRTDYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTE 186
V L S SWQDLKD+MR+AG+V +A+ + GV+++ DMK A+ KLD TE
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADTHKGRRNE-GVIEFRQYSDMKRALEKLDGTE 164
>gi|345793997|ref|XP_865416.2| PREDICTED: serine/arginine-rich splicing factor 4 isoform 3 [Canis
lupus familiaris]
Length = 469
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 83/142 (58%), Gaps = 12/142 (8%)
Query: 46 CYCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGA 105
Y FVEF++ RDA+DA+ +G + G R+ VE A RGP RR G G G G
Sbjct: 5 AYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHA-----RGP----RRDGSYGSGRSGY 55
Query: 106 GGAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYG 165
G +G ++G +EYR+IV L S SWQDLKD+MR+AG+V +A+ + + G
Sbjct: 56 GYRRSGRD--KYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNE-G 112
Query: 166 VVDYTNPEDMKYAIRKLDDTEF 187
V+++ + DMK A+ KLD TE
Sbjct: 113 VIEFVSYSDMKRALEKLDGTEV 134
>gi|390597697|gb|EIN07096.1| hypothetical protein PUNSTDRAFT_71302 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 282
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 90/183 (49%), Gaps = 28/183 (15%)
Query: 6 SRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGR 65
+R +Y+G LP D R +V F YG I+D + + FVEFE+ RDAEDA+
Sbjct: 3 ARRLYLGRLPPDTRSEDVSKFFDGYGHIVDCRVMT-----GFGFVEFESTRDAEDALNHF 57
Query: 66 DGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
+G F+G + +E A S RR Y A R R
Sbjct: 58 NGKPFNGANIVIEFAK-------ESRPRRDVYE---------------ADRPRARRPPGI 95
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
R+IV G+ SWQDLKD R+AG+V +A++ RD G G+++Y ED A+R+LD
Sbjct: 96 RLIVSGVSRDTSWQDLKDFGREAGNVSYADIDRDHPGE-GILEYLTREDADRAVRELDGK 154
Query: 186 EFR 188
+ R
Sbjct: 155 DLR 157
>gi|402576825|gb|EJW70782.1| hypothetical protein WUBG_18310 [Wuchereria bancrofti]
Length = 153
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 74/127 (58%), Gaps = 14/127 (11%)
Query: 16 SDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDGCRL 75
SD+++ ++ED+FYKYGRI I++K P + F+EF++ RDA DA+ GRDGY+FDGCR+
Sbjct: 30 SDVKQRDLEDIFYKYGRINFIDIKFTRDVP-FAFIEFDDPRDARDAVHGRDGYDFDGCRI 88
Query: 76 RVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVIVRGLPSS 135
RVEL G RGP YG G S YRVIV GLP +
Sbjct: 89 RVELTRGVGPRGPGGR---PLYGPDPRSPRRGPPPRR----------SGYRVIVSGLPDT 135
Query: 136 ASWQDLK 142
SWQDLK
Sbjct: 136 GSWQDLK 142
>gi|395522106|ref|XP_003765081.1| PREDICTED: serine/arginine-rich splicing factor 4 [Sarcophilus
harrisii]
Length = 338
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 83/141 (58%), Gaps = 12/141 (8%)
Query: 47 YCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAG 106
Y FVEF++ RDA+DA+ +G + G R+ VE A RGP RR G G G G G
Sbjct: 32 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHA-----RGP----RRDGSYGSGRSGYG 82
Query: 107 GAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGV 166
+G ++G +EYR+IV L S SWQDLKD+MR+AG+V +A+ + + GV
Sbjct: 83 YRRSGRD--KYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNE-GV 139
Query: 167 VDYTNPEDMKYAIRKLDDTEF 187
+++ + DMK A+ KLD TE
Sbjct: 140 IEFVSYSDMKRALEKLDGTEV 160
>gi|308499132|ref|XP_003111752.1| hypothetical protein CRE_02981 [Caenorhabditis remanei]
gi|308239661|gb|EFO83613.1| hypothetical protein CRE_02981 [Caenorhabditis remanei]
Length = 317
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 65/103 (63%), Gaps = 4/103 (3%)
Query: 118 GISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKY 177
G R S+YR+IV GLP S SWQD+KDH+R+AGD+C+A V E G+V++T EDM
Sbjct: 152 GPLRRSDYRLIVEGLPPSGSWQDVKDHLREAGDICYANV----ENGRGIVEFTRAEDMHK 207
Query: 178 AIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRS 220
AIRK DDT+ ++ + D SRSRS SR RSRS
Sbjct: 208 AIRKFDDTKLKSHKGETAYIRVKEDTRSSRSRSPKTSRRRSRS 250
>gi|346977018|gb|EGY20470.1| pre-mRNA splicing factor [Verticillium dahliae VdLs.17]
Length = 322
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 106/209 (50%), Gaps = 22/209 (10%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP ++ + EVE F +G I +I+L + F+E+++A DA D + D
Sbjct: 9 LYLGNLPRNVTKAEVEGHFATHGTGEITEIKLMN-----GFGFIEYKDAMDARDVVP--D 61
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G +F G RL V+ A G + R GG GG A R R +++R
Sbjct: 62 GSDFMGERLTVQFARG-------TRHRDGGAAPGGFNNNNNTHNERAAPR---PRRTQHR 111
Query: 127 VIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
+ + GLP+ SWQDLKD R++ DV ++E RD G G V++ D++ A+ KLD
Sbjct: 112 MQITGLPTDTSWQDLKDFARQSSLDVVYSETGRDGNGR-GFVEFETAADLRTAVEKLDGR 170
Query: 186 EFRNPWARGRITVKRYDRSPSRSRSRSRS 214
EF+ + + D P +R RSRS
Sbjct: 171 EFKGKPVNC-VADTQPDIPPRDNRGRSRS 198
>gi|345571438|gb|EGX54252.1| hypothetical protein AOL_s00004g285 [Arthrobotrys oligospora ATCC
24927]
Length = 377
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 106/209 (50%), Gaps = 29/209 (13%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+ +Y+ S + +VED F K+G E+K+ + F+E+ N DA D +
Sbjct: 24 QLVYLCPFVSTATKKDVEDFFVKHGHGTIQEIKLMN---GFGFIEYSNPSDARDIVPIFH 80
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G F RL V+ A G P+ +D G G R R + YR
Sbjct: 81 GKEFMDSRLTVQFARGPR---PTRNDFNGPSGD----------------RTPRPRRTPYR 121
Query: 127 VIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
+ + GLP+ SWQDLKD RK+G DV F+EVSR+ +G+ G+V++ +D++ AI KLD+
Sbjct: 122 MNISGLPTDTSWQDLKDFARKSGVDVVFSEVSRNRDGS-GIVEFETADDLRIAINKLDNY 180
Query: 186 EFRNPWARGRITVKRYDRSPSRSRSRSRS 214
+F+ GR++ D+ SR RSRS
Sbjct: 181 DFKG----GRVSCTS-DQQARNSRGRSRS 204
>gi|341881506|gb|EGT37441.1| hypothetical protein CAEBREN_07353 [Caenorhabditis brenneri]
Length = 401
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 93/179 (51%), Gaps = 13/179 (7%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNLP D+ + +V F +G + ++ K C FV + + R+A+DA+ +
Sbjct: 8 VYVGNLPLDVTKEQVGQFFSNWGEVTYVDFKQTKTGRC-AFVGYYDRREAQDAVMMMNSA 66
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
F G RLRVE +G GP RG G + A G+ GI R +++RV
Sbjct: 67 VFHGRRLRVEFP---NGLGP-----RGRNGQPMSSMNSNARIRRPPGQ-GIQRRTDFRVQ 117
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
VRG+P + SWQD+KDH+R AG+V FA++ G+V++ ++ I + +F
Sbjct: 118 VRGIPETGSWQDIKDHVRAAGEVVFADIRGHG---IGIVEFEEEGSVRKCIEMFHNQDF 173
>gi|194376808|dbj|BAG57550.1| unnamed protein product [Homo sapiens]
Length = 125
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 55/71 (77%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+D+RE ++EDLFYKYGRI +IELK + FV FE+ RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGCRLRVEL 79
++ CRLRVE
Sbjct: 76 DYGQCRLRVEF 86
>gi|449488807|ref|XP_002189002.2| PREDICTED: serine/arginine-rich splicing factor 4 [Taeniopygia
guttata]
Length = 446
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 82/141 (58%), Gaps = 12/141 (8%)
Query: 47 YCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAG 106
Y FVEF++ RDA+DA+ +G + G R+ VE A RGP RR G G G G
Sbjct: 6 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHA-----RGP----RRDSSYGSGRSGYG 56
Query: 107 GAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGV 166
+G ++G +EYR+IV L S SWQDLKD+MR+AG+V +A+ + + GV
Sbjct: 57 YRRSGRD--KYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNE-GV 113
Query: 167 VDYTNPEDMKYAIRKLDDTEF 187
+++ + DMK A+ KLD TE
Sbjct: 114 IEFKSYSDMKRALEKLDGTEV 134
>gi|223648456|gb|ACN10986.1| Splicing factor, arginine/serine-rich 5 [Salmo salar]
Length = 315
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 99/192 (51%), Gaps = 21/192 (10%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI ++ LK + FVEF++ RDA+DA+ +G
Sbjct: 6 VFIGRLSPHARERDVEKFFKGYGRIREVNLK-----NGFGFVEFDDHRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGG-------------YGGGGAGGAGGAGAGAGAG 115
C RV + H S RG GG + G G G G G+
Sbjct: 61 EL--CSERVTIEHARSRRGRGGGPGMGGGGGGGGGGRFSPRFSSYRQGSGGHGGGGGGSS 118
Query: 116 RFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDM 175
R+G +E+R+IV L S SWQDLKD MRKAG+V F + R ++ GVV++ + DM
Sbjct: 119 RYGPPVRTEHRIIVENLSSRISWQDLKDLMRKAGEVTFVDAHRTNKNE-GVVEFASHSDM 177
Query: 176 KYAIRKLDDTEF 187
K AI KLD T+
Sbjct: 178 KNAIDKLDGTDL 189
>gi|354472339|ref|XP_003498397.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Cricetulus
griseus]
Length = 476
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 83/141 (58%), Gaps = 12/141 (8%)
Query: 47 YCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAG 106
Y FVEF++ RDA+DA+ +G + G R+ VE A RGP RR G G G G G
Sbjct: 22 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHA-----RGP----RRDGSYGSGRSGYG 72
Query: 107 GAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGV 166
+G ++G +EYR+IV L S SWQDLKD+MR+AG+V +A+ + + GV
Sbjct: 73 YRRSGRD--KYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNE-GV 129
Query: 167 VDYTNPEDMKYAIRKLDDTEF 187
+++ + DMK A+ KLD TE
Sbjct: 130 IEFVSYSDMKRALEKLDGTEV 150
>gi|302894677|ref|XP_003046219.1| hypothetical protein NECHADRAFT_33691 [Nectria haematococca mpVI
77-13-4]
gi|256727146|gb|EEU40506.1| hypothetical protein NECHADRAFT_33691 [Nectria haematococca mpVI
77-13-4]
Length = 329
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 103/205 (50%), Gaps = 35/205 (17%)
Query: 1 MSGRFSRT-IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARD 57
M+ S T +Y+GNLP + + +VE F +G I +++L + F+E+++ D
Sbjct: 1 MTTEVSSTRLYLGNLPRNATKSDVEAHFATHGTGEITEVKLM-----NGFGFIEYKDPMD 55
Query: 58 AEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRF 117
A+D + DG NF G RL V+ AHG R GG+G
Sbjct: 56 AQDVVP--DGSNFMGERLTVQFAHG-------PRHREGGFGNHERAAPR----------- 95
Query: 118 GISRHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMK 176
R + +R+ + GLP+ SWQDLKD R++ DV ++E RDS G G V++ D++
Sbjct: 96 --PRRTPHRMQITGLPNDTSWQDLKDFARQSSLDVVYSETGRDSNG-RGFVEFETAADLR 152
Query: 177 YAIRKLDDTEF---RNPWARGRITV 198
A+ KLD EF RN R R+++
Sbjct: 153 TAVEKLDGREFKGQRNMLTRSRLSL 177
>gi|348515955|ref|XP_003445505.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Oreochromis niloticus]
Length = 258
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 90/179 (50%), Gaps = 41/179 (22%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI +I LK + FVEF++ RDA+DA+ Y
Sbjct: 6 VFIGRLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAV-----Y 55
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+G L S+R + +G R+G +++R++
Sbjct: 56 ELNGKEL--------------CSER----------------SLSGPNRYGPPVRTDHRLV 85
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MRKAG+V F + R ++ GVV++ + DMK AI KLD TE
Sbjct: 86 VENLSSRTSWQDLKDLMRKAGEVTFVDAHRPTKNE-GVVEFASRSDMKNAISKLDGTEL 143
>gi|410897813|ref|XP_003962393.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Takifugu
rubripes]
Length = 288
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 100/179 (55%), Gaps = 10/179 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G+L RE +VE F YGRI +I LK + FVEF++ RDA+DA+ +G
Sbjct: 6 VFIGHLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
C RV + H S RG G +GGGG GG GG G G + +E+R+I
Sbjct: 61 EL--CSERVTIEHARSRRGRGGGPGMGRFGGGGGGGGGGGGGGGYRYGPPVR--TEHRLI 116
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MRKAG+V F + R ++ GVV++ + DMK AI K D TE
Sbjct: 117 VENLSSRISWQDLKDMMRKAGEVTFVDAHRPNKNE-GVVEFASRSDMKSAISKFDGTEL 174
>gi|403418011|emb|CCM04711.1| predicted protein [Fibroporia radiculosa]
Length = 328
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 100/196 (51%), Gaps = 27/196 (13%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
+R +Y+G LP D R +V F YGRI+D + + FVEFE++RDA+DA+R
Sbjct: 1 MARRLYLGRLPPDARSEDVSKFFDGYGRIVDCRVMT-----GFGFVEFESSRDADDAVRD 55
Query: 65 RDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
+G F G + VE A S RR + A A R
Sbjct: 56 FNGKAFMGANIVVEFAK-------ESRPRREVFEPERAPRA--------------RRPPG 94
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDD 184
+R++V G+ SWQDLKD R+AG V +A++ RD+ G G+++Y + +D + A+++LD
Sbjct: 95 FRLVVSGISRDTSWQDLKDFGREAGSVSYADIDRDAAGE-GILEYLSRDDAERAVKELDG 153
Query: 185 TEFRNPWARGRITVKR 200
+ R R + ++R
Sbjct: 154 KDLRGQPVRVALDLER 169
>gi|326482144|gb|EGE06154.1| pre-mRNA splicing factor [Trichophyton equinum CBS 127.97]
Length = 304
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 114/225 (50%), Gaps = 43/225 (19%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLF--YKYGRILDIELKIPPRPPCYCFVEFENARDA 58
MS S +Y+GNLP ++ + ++E+ F + G+I +I+L + F+E+E+A DA
Sbjct: 1 MSEVSSTRLYLGNLPRNVNKQDIEEHFGSHGTGKITEIKLMQ-----GFGFIEYEDAMDA 55
Query: 59 EDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFG 118
+D + G +F G RL V+ A G R P G + A R
Sbjct: 56 KDVVPAFHGTDFKGERLTVQFARGPRRREPFP----------------GPPERSAAPR-- 97
Query: 119 ISRHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKY 177
R + YR+ + GLP + SWQDLKD R++G DV ++E +RD +G G V++ N D++
Sbjct: 98 -PRRTIYRMQITGLPET-SWQDLKDFARQSGLDVVYSE-TRDRDGK-GFVEFENGNDLRT 153
Query: 178 AIRKLDDTEFRNPWARGRITVK---------RYDRSPSRSRSRSR 213
A+ KLD T+F+ R+T R R P RSRS R
Sbjct: 154 AVEKLDGTDFKG----SRVTCTADIQPPMEDRVPRDPYRSRSPRR 194
>gi|209155162|gb|ACI33813.1| Splicing factor, arginine/serine-rich 5 [Salmo salar]
Length = 316
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 92/184 (50%), Gaps = 13/184 (7%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
I+VG L RE +VE F YGRI DI+LK + FVEF++ RDAEDA+ DG
Sbjct: 6 IFVGRLNPSAREKDVERFFKGYGRIRDIDLKR-----GFGFVEFDDPRDAEDAVYELDGK 60
Query: 69 NFDGCRLRVELAHG-----GSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHS 123
C RV + H G GG GGG G G+ R +
Sbjct: 61 EL--CNERVTIEHARVRLRGGRGRGGDRGGGGGGGGGRFPDRYGRGSQDSRSRNPPPMRT 118
Query: 124 EYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLD 183
E R+IV L S SWQDLKD MR+AG+V FA+ R + GVV++ + D+K A+ KL
Sbjct: 119 ENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR-PKLNEGVVEFASYSDLKNALEKLS 177
Query: 184 DTEF 187
E
Sbjct: 178 GKEI 181
>gi|221130958|ref|XP_002164143.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Hydra magnipapillata]
Length = 264
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 96/183 (52%), Gaps = 24/183 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
I+VG L + R ++E+ F G R+ D+ +K+ Y FVEFE+ RDA+DA+ D
Sbjct: 12 IFVGRLNPEARVRDLENFFKDNGFSRLKDVNIKL-----GYAFVEFEDKRDADDAVYELD 66
Query: 67 GYNFDGCRLRVELAHGG--SGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
F G RL VE A G + DRR G+ G GR ++E
Sbjct: 67 RKEFFGSRLTVEHAKHGPRADMDKRDGDRRKGHEN-----------DRGRGR---PYNTE 112
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDD 184
+R+IV L S W DLKD+ R AG+V F + +++ G GVV++ + +MK A++K D
Sbjct: 113 WRLIVTNLSSRVGWMDLKDYFRSAGEVTFTKANKERVGE-GVVEFRSYREMKRALKKFDG 171
Query: 185 TEF 187
+EF
Sbjct: 172 SEF 174
>gi|417410943|gb|JAA51935.1| Putative serine/arginine-rich splicing factor 4, partial [Desmodus
rotundus]
Length = 467
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 84/141 (59%), Gaps = 12/141 (8%)
Query: 47 YCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAG 106
Y FVEF++ RDA+DA+ +G + G R+ VE A RGP R G YG +G +G
Sbjct: 1 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHA-----RGPR---RDGSYG---SGRSG 49
Query: 107 GAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGV 166
+G ++G +EYR+IV L S SWQDLKD+MR+AG+V +A+ + + GV
Sbjct: 50 YGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNE-GV 108
Query: 167 VDYTNPEDMKYAIRKLDDTEF 187
+++ + DMK A+ KLD TE
Sbjct: 109 IEFVSYSDMKRALEKLDGTEV 129
>gi|328849877|gb|EGF99050.1| hypothetical protein MELLADRAFT_79554 [Melampsora larici-populina
98AG31]
Length = 259
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 106/210 (50%), Gaps = 27/210 (12%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R +Y+G +P + ++E F +YG +LD+ + + F+E++ RDAEDA+ +
Sbjct: 6 RRLYIGRIPQEATRTDIEKYFGRYGTLLDVRIM-----AGFGFLEYDQVRDAEDAVHDLN 60
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G F G RL VE A + P G G G G G R S +R
Sbjct: 61 GREFMGDRLIVEFA-----KAPRGGRE-----------MYGGGGGGSYGGGGGPRRSGFR 104
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTE 186
+IV+G+ SWQDLKD R+AG+V A+V R+ G G+++Y++ +D A+RKLD T+
Sbjct: 105 LIVKGISHETSWQDLKDFARQAGNVIRADVDRNMPGE-GLIEYSSQDDADNALRKLDGTD 163
Query: 187 FRNPWARGRITVKRYDRSPSRSRSRSRSRS 216
+G + DR R RSRS S
Sbjct: 164 L-----KGMVVTLFEDRPGGGRRDRSRSPS 188
>gi|85096852|ref|XP_960334.1| hypothetical protein NCU07069 [Neurospora crassa OR74A]
gi|28921822|gb|EAA31098.1| predicted protein [Neurospora crassa OR74A]
Length = 313
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 105/213 (49%), Gaps = 34/213 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP + +VE F +G I +I+L + F+E+++A DA D + D
Sbjct: 9 LYLGNLPRHATKADVEAHFATHGTGEITEIKLMN-----GFGFIEYKDAMDARDVVP--D 61
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G +F G RL V+ A G R GG G R + +R
Sbjct: 62 GSDFMGERLTVQFARGARHR------------------EGGPGFTHERNSQPRPRRTPHR 103
Query: 127 VIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
+ + GLP+ SWQDLKD R++G DV ++E +R+ G G V++ N D++ A+ KLD+
Sbjct: 104 MQISGLPNETSWQDLKDFARQSGLDVVYSETTRNQNGE-GFVEFENAADLRTAVEKLDNR 162
Query: 186 EFRNPWARGRITVKRYDRSPSRSRSRSRSRSRS 218
EF +G+ + P R+ R+RSRS
Sbjct: 163 EF-----KGQRVTCVANTQPDIPRNDHRARSRS 190
>gi|50540286|ref|NP_001002610.1| splicing factor, arginine/serine-rich 5 [Danio rerio]
gi|49900455|gb|AAH75982.1| Splicing factor, arginine/serine-rich 5b [Danio rerio]
Length = 285
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 93/182 (51%), Gaps = 19/182 (10%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
I++G L RE +VE F YGRI DI+LK + FVEF++ RDAEDA+ DG
Sbjct: 6 IFIGRLNPSAREKDVERFFKGYGRIRDIDLKR-----GFGFVEFDDPRDAEDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAG---RFGISRHSEY 125
C RV + H R G G G GG A G G+ R +E
Sbjct: 61 EL--CNERVTIEHARV--------RLRGGRGRGGGGRFPARYGRGSQDSRRNPPPMRTEN 110
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
R+IV L S SWQDLKD MR+AG+V FA+ R + GVV++ + D+K A+ KL
Sbjct: 111 RLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPNLNE-GVVEFASHSDLKNALEKLSGK 169
Query: 186 EF 187
E
Sbjct: 170 EI 171
>gi|53130660|emb|CAG31659.1| hypothetical protein RCJMB04_9e4 [Gallus gallus]
Length = 165
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 92/168 (54%), Gaps = 19/168 (11%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VG+L S RE +VE F YGRI +I LK + FVEFE+ RDA+DAI +G
Sbjct: 6 VFVGHLSSRARERDVEKFFKGYGRIREIHLK-----NGFGFVEFEDHRDADDAIYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
C RV + H + RG +R Y + +G+ R+G +E+R+I
Sbjct: 61 EL--CDERVTIEHARARRGRGRFAQRFSYY-----------SQSGSSRYGPPVRTEHRII 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMK 176
V L S SWQDLKD MRKAG+V + + R++ GVV++ + D++
Sbjct: 108 VENLSSRISWQDLKDVMRKAGEVTYVDAHRNNRNE-GVVEFASYSDIE 154
>gi|348519443|ref|XP_003447240.1| PREDICTED: hypothetical protein LOC100690923 isoform 1 [Oreochromis
niloticus]
Length = 390
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 96/178 (53%), Gaps = 18/178 (10%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYRAREKDVERFFKGYGKILEVDLK-----NGYGFVEFDDPRDADDAVYDLNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE G G G GG G G R+G ++YR+I
Sbjct: 59 ELCGERVIVEHTRGPRRDGGYGG------------GGGGYGRWGGRDRYGPPIRTDYRLI 106
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTE 186
V L S SWQDLKD+MR+AG+V +A+ + + GV+++ DMK A+ KLD TE
Sbjct: 107 VENLSSRCSWQDLKDYMRQAGEVTYADTHKGRKNE-GVIEFRLYSDMKRALEKLDGTE 163
>gi|449502441|ref|XP_002200515.2| PREDICTED: serine/arginine-rich splicing factor 4-like [Taeniopygia
guttata]
Length = 277
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 104/216 (48%), Gaps = 43/216 (19%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VG+L S RE +VE F YGRI +I LK + FVEFE+ RDA+DAI +G
Sbjct: 6 VFVGHLSSRARERDVEKFFKGYGRIREIHLK-----NGFGFVEFEDHRDADDAIYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
C RV + H + RG +R Y + +G+ R+G +E+R+I
Sbjct: 61 EL--CDERVTIEHARARRGRGRFSQRFSY----------YQSTSGSSRYGPPVRTEHRII 108
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V L S SWQDLKD MRKAG+V + + R++ GVV++ + DMK A+ KLD TE
Sbjct: 109 VENLSSRISWQDLKDVMRKAGEVTYVDAHRNNRNE-GVVEFASYSDMKSALEKLDGTELN 167
Query: 189 NPWARGRITVKRYDRSPSRSRSRSRSRSRSRSRIVR 224
R ++T R
Sbjct: 168 G--RRIKLTEDH-----------------------R 178
>gi|302690366|ref|XP_003034862.1| hypothetical protein SCHCODRAFT_84382 [Schizophyllum commune H4-8]
gi|300108558|gb|EFI99959.1| hypothetical protein SCHCODRAFT_84382 [Schizophyllum commune H4-8]
Length = 292
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 92/188 (48%), Gaps = 27/188 (14%)
Query: 2 SGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDA 61
S R +Y+G LP D +V+ F YG ++D + + F+E+E+++DAEDA
Sbjct: 4 SATMGRRLYLGKLPPDTAPEDVKKTFGAYGTVVDCRVMT-----GFGFIEYESSKDAEDA 58
Query: 62 IRGRDGYNFDGCRLRVELAHGGSGR-GPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
+ +G F+G + VE A R P DR G GG
Sbjct: 59 VNEMNGKTFNGNSIAVEFARENRPRREPYERDREYGAPRRRPGG---------------- 102
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
+RV+V G+ SWQDLKD R+AG V FA++ RD G GV++Y + +D +A+R
Sbjct: 103 ----FRVLVTGVSRDTSWQDLKDFGREAGSVTFADIDRDVPGQ-GVLEYMSRDDADHAVR 157
Query: 181 KLDDTEFR 188
LD + R
Sbjct: 158 YLDRRDLR 165
>gi|241846316|ref|XP_002415562.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
gi|215509774|gb|EEC19227.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
Length = 355
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 94/180 (52%), Gaps = 7/180 (3%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G+L +RE ++E F +G+I ++ LK + FVEF++ RDA+DA+ +G
Sbjct: 6 VYIGHLSYRVRERDLEKFFRGFGKIREVLLK-----NGFGFVEFDDDRDADDAVYELNGR 60
Query: 69 NFDGCRLRVELAH-GGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRV 127
DG R L GS G YG A A R+G ++YRV
Sbjct: 61 ELDGERYFTTLGRRAGSRNGTPRPGCAQLYGHVSNCFRLFGRATAPVNRYGPPTRTDYRV 120
Query: 128 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
I+ L S SWQDLKD MR+ GDV +A+ R GVV++ + DM+ AI KLD+TE
Sbjct: 121 IIENLSSRISWQDLKDRMRQVGDVTYADAHRRKRNE-GVVEFASYSDMRRAIDKLDNTEL 179
>gi|225717806|gb|ACO14749.1| Serine-arginine protein 55 [Caligus clemensi]
Length = 189
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 89/182 (48%), Gaps = 22/182 (12%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNLP ++RE +VE F +YGRI ++ +K Y FVEF++ RDA+D + DG
Sbjct: 7 VYVGNLPENVRERDVEKFFKEYGRIREVVIK-----SGYGFVEFDDPRDADDVVNDMDGK 61
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISR------- 121
F G R+RVE+A R P R G+ G+ +
Sbjct: 62 EFQGGRVRVEMA-----RDPRDRRGRDRGSDRGSDRGSDRGSDRRSSYDRRDSGRGRRGN 116
Query: 122 ----HSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKY 177
+ YR+ V+ L S SWQDLKD+ R AGD+ + +G GVV++ + +D
Sbjct: 117 PPGPKTNYRITVQNLSSRTSWQDLKDYFRAAGDITYTNAHTPRQGE-GVVEFASSQDWNT 175
Query: 178 AI 179
+
Sbjct: 176 PL 177
>gi|209154606|gb|ACI33535.1| Splicing factor, arginine/serine-rich 5 [Salmo salar]
Length = 329
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 96/190 (50%), Gaps = 21/190 (11%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI ++ LK + FVEF++ RDA+DA+ +G
Sbjct: 6 VFIGRLSPHARERDVEKFFKGYGRIREVNLKN-----GFGFVEFDDPRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSS-----------SDRRGGYGGGGAGGAGGAGAGAGAGRF 117
C RV + H S RG S R Y G GG G G+
Sbjct: 61 EL--CSERVTIEHARSRRGRGGGPGMGGGGGRFSPRFSSYRQGSGDRRGGGGGGSSRYGP 118
Query: 118 GISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKY 177
+ +E+R+IV L S SWQDLKD MRK G+V F + R ++ GVV++ + DMK
Sbjct: 119 PV--RTEHRIIVENLSSRISWQDLKDLMRKVGEVTFVDAHRTNKNE-GVVEFASHSDMKN 175
Query: 178 AIRKLDDTEF 187
A+ KLD T+
Sbjct: 176 ALDKLDGTDL 185
>gi|159163527|pdb|1X4C|A Chain A, Solution Structure Of Rrm Domain In Splicing Factor 2
Length = 108
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 54/66 (81%), Gaps = 3/66 (4%)
Query: 124 EYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLD 183
E RV+V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ EDM YA+RKLD
Sbjct: 15 ENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD--GT-GVVEFVRKEDMTYAVRKLD 71
Query: 184 DTEFRN 189
+T+FR+
Sbjct: 72 NTKFRS 77
>gi|393216709|gb|EJD02199.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 270
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 92/184 (50%), Gaps = 27/184 (14%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
+R +Y+G LP D R EV F +G ++D+ + + FVEFE++RDAEDA+R
Sbjct: 1 MARRLYLGKLPPDTRTDEVTKYFDGFGPLVDVRVMT-----GFGFVEFESSRDAEDALRD 55
Query: 65 RDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
G F G + VE A GR DR + A R R +
Sbjct: 56 IRGKPFLGSNIVVEFAKENRGRRNDYEDR------------------SFAPR---RRPAG 94
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDD 184
R+ V + SWQDLKD R+AG V FA++ R+ G G+++Y + +D + A+++LD
Sbjct: 95 IRISVDNISKDTSWQDLKDFGREAGSVSFADIDREVPGR-GILEYASRDDAEQAVKELDG 153
Query: 185 TEFR 188
E R
Sbjct: 154 KELR 157
>gi|156030683|ref|XP_001584668.1| hypothetical protein SS1G_14437 [Sclerotinia sclerotiorum 1980]
gi|154700828|gb|EDO00567.1| hypothetical protein SS1G_14437 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 307
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 102/211 (48%), Gaps = 34/211 (16%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP + + +VE F +G I +I+L + F+E+++A DA D +
Sbjct: 9 LYLGNLPRNATKADVEAHFNTHGTGEITEIKLMN-----GFGFIEYKDAMDARDVVPAFH 63
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G +F G RL V+ A G R ++ R A R R + +R
Sbjct: 64 GSDFMGERLTVQFARGTRNRDTFANPERT------------------APR---PRRTPHR 102
Query: 127 VIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
+ + GLP SWQDLKD R++ DV ++E RD +G V++ D+K A+ KLD
Sbjct: 103 MQISGLPGETSWQDLKDFARQSSLDVVYSETGRDRDGKGSFVEFETAADLKTAVEKLDGR 162
Query: 186 EFRNPWARGRITVKRYDRSPSRSRSRSRSRS 216
EF+ R+T D P R R+RSRS
Sbjct: 163 EFKG----ARVTCTA-DTQPDLPRDRARSRS 188
>gi|393912529|gb|EFO18201.2| Sfrs5 protein [Loa loa]
Length = 287
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 92/182 (50%), Gaps = 18/182 (9%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVG L E ++E F YGRI DI LK + FVEF++ RDA+DA+
Sbjct: 4 MSARVYVGRLSYRASERDIEHFFRGYGRIRDIVLK-----NGFGFVEFDDPRDADDAVYE 58
Query: 65 RDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
+G G R+ +E S RGP S R G+GG R+G + +
Sbjct: 59 LNGKELCGERVILEF----SRRGPRS---RMGFGGFDR-----FPPPRRESRYGPPQQTR 106
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDD 184
YR+IV L S SWQDLKD MR AG+V FA+ + G+V + +D++ A+ KL
Sbjct: 107 YRLIVENLSSRCSWQDLKDIMRTAGEVTFADAHKQHPNE-GIVCFLTRDDLERALDKLQG 165
Query: 185 TE 186
E
Sbjct: 166 KE 167
>gi|426222714|ref|XP_004005530.1| PREDICTED: uncharacterized protein LOC101109078 [Ovis aries]
Length = 437
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 85/144 (59%), Gaps = 18/144 (12%)
Query: 47 YCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAG 106
Y FVEF++ RDA+DA+ +G + G R+ VE A RGP R G YG +G
Sbjct: 23 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHA-----RGPR---RDGSYG------SG 68
Query: 107 GAGAG---AGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGT 163
+G G +G ++G +EYR+IV L S SWQDLKD+MR+AG+V +A+ + +
Sbjct: 69 RSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNE 128
Query: 164 YGVVDYTNPEDMKYAIRKLDDTEF 187
GV+++ + DMK A+ KLD TE
Sbjct: 129 -GVIEFVSYSDMKRALEKLDGTEV 151
>gi|317143798|ref|XP_003189536.1| pre-RNA splicing factor Srp2 [Aspergillus oryzae RIB40]
Length = 299
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 117/245 (47%), Gaps = 31/245 (12%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP ++ + ++E+ F +G +I +I+L + F+E+E+A DA D +
Sbjct: 9 LYLGNLPRNVTKQDIEEHFSTHGSGKITEIKLMN-----GFGFIEYEDAMDARDVVPAFH 63
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G +F G RL V+ A RGP R+ + G R + YR
Sbjct: 64 GSDFKGERLTVQFA-----RGPR---RKENFPGP-----------MDRPNMPRPRRTVYR 104
Query: 127 VIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
++V GLP + SWQDLKD R AG DV ++E R E G V++ D+K AI KLD
Sbjct: 105 MMVSGLPET-SWQDLKDFARGAGLDVVYSETGR--EPGRGFVEFETANDLKTAIEKLDGR 161
Query: 186 EFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRSRIVRRNRSKSLERSVS-RSVSRSMS 244
+F+ ++ D P R RSRS RS + +R R S R+ R S
Sbjct: 162 DFKGSRVSCVADIQPVDERPFRDPYRSRSPRRSYPPVDEYDRRFPPPRGYSPRAHYRERS 221
Query: 245 ASPVK 249
P++
Sbjct: 222 PIPMR 226
>gi|298714075|emb|CBJ33838.1| similar to arginine/serine-rich splicing factor 7 [Ectocarpus
siliculosus]
Length = 249
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/181 (43%), Positives = 107/181 (59%), Gaps = 8/181 (4%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VGNL S E ++ D F K+G + ++ + PP + FV F + RDA DA+R DG
Sbjct: 9 VWVGNLGSTCEERDLRDEFSKFGELN--KVWVARNPPGFAFVWFADDRDAGDAVREIDGK 66
Query: 69 NFDGCRLRVELAH-GGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFG-ISRHSEYR 126
+ G RVE++H G RGP GG GGGG GG GG G G GA R G + + Y+
Sbjct: 67 SIAGREWRVEVSHQRGRDRGPPGGGYGGGGGGGGYGGGGGGGGGYGAPRVGGAAPRTGYK 126
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTE 186
V + GLP W +LKD +RKAGDV +A+V G GV +++N +DM A+R+LDDT
Sbjct: 127 VRITGLPEGMRWSELKDFVRKAGDVTYADV----RGDEGVAEFSNRDDMSRAVRELDDTY 182
Query: 187 F 187
F
Sbjct: 183 F 183
>gi|449296860|gb|EMC92879.1| hypothetical protein BAUCODRAFT_114866 [Baudoinia compniacensis
UAMH 10762]
Length = 326
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 108/212 (50%), Gaps = 32/212 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP + + +VE+ F +G I +I+L + F+E+++A DA D +
Sbjct: 16 LYLGNLPRNATKADVENHFNTHGTGEITEIKLMN-----GFGFIEYKDAMDARDVVPAFH 70
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G F G RL V+ A GG+ R GY A A R R + +R
Sbjct: 71 GSEFMGERLVVQFARGGN-------RPRDGYND----------APRMAPR---PRRTVHR 110
Query: 127 VIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRD---SEGTYGVVDYTNPEDMKYAIRKL 182
+ + GLP SWQDLKD R++G DV ++EV+R+ S G G V+Y +D+ A+ KL
Sbjct: 111 MTITGLPFETSWQDLKDFARQSGLDVVYSEVARERDASGGGKGFVEYETAQDLASAVEKL 170
Query: 183 DDTEFRNPWARGRITVKRYDRSPSRSRSRSRS 214
D+ +F+ R I+ + D R R RSRS
Sbjct: 171 DNHDFKGSTVRC-ISDPQADIPRPRERFRSRS 201
>gi|238487096|ref|XP_002374786.1| pre-RNA splicing factor Srp2, putative [Aspergillus flavus
NRRL3357]
gi|317143800|ref|XP_001819713.2| pre-RNA splicing factor Srp2 [Aspergillus oryzae RIB40]
gi|220699665|gb|EED56004.1| pre-RNA splicing factor Srp2, putative [Aspergillus flavus
NRRL3357]
Length = 300
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 117/245 (47%), Gaps = 31/245 (12%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP ++ + ++E+ F +G +I +I+L + F+E+E+A DA D +
Sbjct: 9 LYLGNLPRNVTKQDIEEHFSTHGSGKITEIKLMN-----GFGFIEYEDAMDARDVVPAFH 63
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G +F G RL V+ A RGP R+ + G R + YR
Sbjct: 64 GSDFKGERLTVQFA-----RGPR---RKENFPGP-----------MDRPNMPRPRRTVYR 104
Query: 127 VIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
++V GLP + SWQDLKD R AG DV ++E R E G V++ D+K AI KLD
Sbjct: 105 MMVSGLPET-SWQDLKDFARGAGLDVVYSETGR--EPGRGFVEFETANDLKTAIEKLDGR 161
Query: 186 EFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRSRIVRRNRSKSLERSVS-RSVSRSMS 244
+F+ ++ D P R RSRS RS + +R R S R+ R S
Sbjct: 162 DFKGSRVSCVADIQPVDERPFRDPYRSRSPRRSYPPVDEYDRRFPPPRGYSPRAHYRERS 221
Query: 245 ASPVK 249
P++
Sbjct: 222 PIPMR 226
>gi|443710288|gb|ELU04543.1| hypothetical protein CAPTEDRAFT_220292 [Capitella teleta]
Length = 291
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 101/200 (50%), Gaps = 32/200 (16%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGR +Y+G L +RE +VE F YGR+ DI LK Y FVEFE+ RDA+D
Sbjct: 1 MSGR----VYIGRLSYQVRERDVERFFKGYGRVTDILLK-----NGYGFVEFEDYRDADD 51
Query: 61 ---------AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGA- 110
+ G R+ VE A G SS G GG G + A
Sbjct: 52 AVYELNGKDLM---------GDRVLVEHAKGTPRGEGRSSSGGRGSDRGGGGDRYNSYAP 102
Query: 111 ---GAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVV 167
A R+G ++YR++V L S SWQDLKD+MR+AG+V +A+ + S+ G+V
Sbjct: 103 PRRSARDSRYGPPVRTQYRLVVENLSSRVSWQDLKDYMRQAGEVTYADAHK-SKRNEGIV 161
Query: 168 DYTNPEDMKYAIRKLDDTEF 187
++ DM AIRKL+ TE
Sbjct: 162 EFATRSDMDNAIRKLNKTEI 181
>gi|348515953|ref|XP_003445504.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Oreochromis niloticus]
Length = 295
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 98/183 (53%), Gaps = 12/183 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI +I LK + FVEF++ RDA+DA+ +G
Sbjct: 6 VFIGRLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRH----SE 124
C RV + H S RG G +GGGG GG GG G ++
Sbjct: 61 EL--CSERVTIEHARSRRGRGGGPGMGRFGGGGGGGGGGGGYRQSRSSGSSRYGPPVRTD 118
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDD 184
+R++V L S SWQDLKD MRKAG+V F + R ++ GVV++ + DMK AI KLD
Sbjct: 119 HRLVVENLSSRTSWQDLKDLMRKAGEVTFVDAHRPTKNE-GVVEFASRSDMKNAISKLDG 177
Query: 185 TEF 187
TE
Sbjct: 178 TEL 180
>gi|449274709|gb|EMC83787.1| Splicing factor, arginine/serine-rich 4, partial [Columba livia]
Length = 257
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 114/256 (44%), Gaps = 21/256 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VG+L S RE +VE F YGRI +I LK + FVEFE+ RDA+DAI +G
Sbjct: 6 VFVGHLSSRARERDVEKFFKGYGRIREIHLK-----NGFGFVEFEDHRDADDAIYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
C RV + H + RG +R Y +G R+G +E+R+I
Sbjct: 61 EL--CDERVTIEHARARRGRGRFSQRFSYYPSQSGS-----------RYGPPIRTEHRII 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V L S SWQDLKD MRKAG+V + + R++ GVV++ + DMK A+ KLD TE
Sbjct: 108 VENLSSRISWQDLKDVMRKAGEVTYVDAHRNNRNE-GVVEFASYSDMKSALEKLDGTELN 166
Query: 189 NPWARGRITVKRYDRSPSRSRSRSRSRSRSRSRIVRRNRSKSLERSVSRSVSRSMSASPV 248
R R+T +
Sbjct: 167 G--RRIRLTEDHRRHRSRSRSRSYSRSRSRSRSTGSSRSDSRSRSRSRSRSRSRSRSRSR 224
Query: 249 KSSRARSRSRSVSPDK 264
SR+RSRSRS +P K
Sbjct: 225 SRSRSRSRSRSRTPKK 240
>gi|299753075|ref|XP_001833047.2| hypothetical protein CC1G_01109 [Coprinopsis cinerea okayama7#130]
gi|298410132|gb|EAU88736.2| hypothetical protein CC1G_01109 [Coprinopsis cinerea okayama7#130]
Length = 279
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 86/189 (45%), Gaps = 32/189 (16%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
SR +Y+G LP D R +V F YGRI+D + + FVEFE+++DAEDA+
Sbjct: 1 MSRRLYLGRLPPDARSDDVSKFFEGYGRIIDCRVMT-----GFGFVEFESSKDAEDAVHQ 55
Query: 65 RDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
+G F G + VE A R + R R
Sbjct: 56 FNGKPFMGTAIVVEFAKESRPRREVAPRAR--------------------------RPPG 89
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDD 184
R+IV G+ SWQDLKD R+ V FA++ RD G GV++Y + ED A++ LD
Sbjct: 90 VRLIVSGISRDTSWQDLKDFGREVASVSFADIDRDVPGQ-GVLEYLSREDADRAVKDLDG 148
Query: 185 TEFRNPWAR 193
E R R
Sbjct: 149 RELRGKLVR 157
>gi|83767572|dbj|BAE57711.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391867601|gb|EIT76847.1| alternative splicing factor SRp55/B52/SRp75 [Aspergillus oryzae
3.042]
Length = 298
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 118/245 (48%), Gaps = 33/245 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP ++ + ++E+ F +G +I +I+L + F+E+E+A DA D + D
Sbjct: 9 LYLGNLPRNVTKQDIEEHFSTHGSGKITEIKLMN-----GFGFIEYEDAMDARDVVP--D 61
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G +F G RL V+ A RGP R+ + G R + YR
Sbjct: 62 GSDFKGERLTVQFA-----RGPR---RKENFPGP-----------MDRPNMPRPRRTVYR 102
Query: 127 VIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
++V GLP + SWQDLKD R AG DV ++E R E G V++ D+K AI KLD
Sbjct: 103 MMVSGLPET-SWQDLKDFARGAGLDVVYSETGR--EPGRGFVEFETANDLKTAIEKLDGR 159
Query: 186 EFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRSRIVRRNRSKSLERSVS-RSVSRSMS 244
+F+ ++ D P R RSRS RS + +R R S R+ R S
Sbjct: 160 DFKGSRVSCVADIQPVDERPFRDPYRSRSPRRSYPPVDEYDRRFPPPRGYSPRAHYRERS 219
Query: 245 ASPVK 249
P++
Sbjct: 220 PIPMR 224
>gi|119596372|gb|EAW75966.1| splicing factor, arginine/serine-rich 6, isoform CRA_c [Homo
sapiens]
Length = 383
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 85/156 (54%), Gaps = 12/156 (7%)
Query: 38 LKIPPR------PPCYCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSS 91
L PPR P Y FVEFE++RDA+DA+ +G G R+ VE A RGP
Sbjct: 61 LTTPPRLSGPRTAPRYGFVEFEDSRDADDAVYELNGKELCGERVIVEHA-----RGPRRD 115
Query: 92 DRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDV 151
YG GG + +G ++G +EYR+IV L S SWQDLKD MR+AG+V
Sbjct: 116 RDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEV 175
Query: 152 CFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
+A+ ++ GV+++ + DMK A+ KLD TE
Sbjct: 176 TYADAHKERT-NEGVIEFRSYSDMKRALDKLDGTEI 210
>gi|452989025|gb|EME88780.1| hypothetical protein MYCFIDRAFT_209897, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 209
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 107/212 (50%), Gaps = 32/212 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP + + +VE+ F +G I +I+L + F+E+++A DA D +
Sbjct: 22 LYLGNLPRNATKADVENHFNTHGTGEITEIKLMN-----GFGFIEYKDAMDARDVVPAFH 76
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G F G RL V+ A G S+ R G+ A R R + +R
Sbjct: 77 GSEFMGERLVVQFARG-------STRPREGF----------EHQPRMAPR---PRRTIHR 116
Query: 127 VIVRGLPSSASWQDLKDHMRKAG-DVCFAEVS--RDSEGT-YGVVDYTNPEDMKYAIRKL 182
+ + GLP SWQDLKD R++G DV ++EV+ RD GT G V+Y D+ A+ KL
Sbjct: 117 MTITGLPFETSWQDLKDFARQSGLDVVYSEVNRERDPSGTGKGFVEYETAADLASAVEKL 176
Query: 183 DDTEFRNPWARGRITVKRYDRSPSRSRSRSRS 214
D++EF+ R I+ + D R R RSRS
Sbjct: 177 DNSEFKGSTVRC-ISDPQTDIPRPRERFRSRS 207
>gi|221117454|ref|XP_002167286.1| PREDICTED: uncharacterized protein LOC100197032 [Hydra
magnipapillata]
Length = 394
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 96/182 (52%), Gaps = 10/182 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IY+G LP DIRE +++ F K+G + +I +K YCF+++E R+AEDA+
Sbjct: 28 IYIGKLPGDIRERDIDKAFSKFGHVREIAMK-----GNYCFLQYEKTREAEDAVYEMHDR 82
Query: 69 NFDGCRLRVELAHGGSG---RGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
+F G R++VE A R PS GYGG + R R S+Y
Sbjct: 83 SFFGERIQVEHARQPKEFGFRAPSRFGGSRGYGGYSRSSTYSSSRDYSRRRSPPQR-SDY 141
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
R+ V L + QDLK M+KAGDV F++ R G GVV++ + +DM+ A++KLD
Sbjct: 142 RLSVTNLSTRCDAQDLKAVMQKAGDVVFSDAHRRRVGE-GVVEFASRKDMERALKKLDGL 200
Query: 186 EF 187
E
Sbjct: 201 EI 202
>gi|348519445|ref|XP_003447241.1| PREDICTED: hypothetical protein LOC100690923 isoform 2 [Oreochromis
niloticus]
Length = 386
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 94/178 (52%), Gaps = 22/178 (12%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYRAREKDVERFFKGYGKILEVDLK-----NGYGFVEFDDPRDADDAVYDLNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE G G G G G R+G ++YR+I
Sbjct: 59 ELCGERVIVEHTRGPRRDGGYGG----------------GGGGGGRDRYGPPIRTDYRLI 102
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTE 186
V L S SWQDLKD+MR+AG+V +A+ + + GV+++ DMK A+ KLD TE
Sbjct: 103 VENLSSRCSWQDLKDYMRQAGEVTYADTHKGRKNE-GVIEFRLYSDMKRALEKLDGTE 159
>gi|154304025|ref|XP_001552418.1| pre-mRNA splicing factor [Botryotinia fuckeliana B05.10]
Length = 308
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 101/211 (47%), Gaps = 33/211 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP + +VE F +G I +I+L + F+E+++A DA D +
Sbjct: 9 LYLGNLPRSATKADVEAHFNTHGTGEITEIKLMN-----GFGFIEYKDAMDARDVVPAFH 63
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G +F G RL V+ A G R +++ A R R + +R
Sbjct: 64 GSDFMGERLTVQFARGTRNRDTFANN-----------------PERTAPR---PRRTPHR 103
Query: 127 VIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
+ + GLP SWQDLKD R++ DV ++E RD +G V++ D+K A+ KLD
Sbjct: 104 MQISGLPGETSWQDLKDFARQSSLDVVYSETGRDRDGKGSFVEFETAADLKTAVEKLDGR 163
Query: 186 EFRNPWARGRITVKRYDRSPSRSRSRSRSRS 216
EF+ R+T D P R R+RSRS
Sbjct: 164 EFKG----ARVTCTA-DTQPDIPRDRARSRS 189
>gi|239606902|gb|EEQ83889.1| pre-RNA splicing factor Srp2 [Ajellomyces dermatitidis ER-3]
gi|327351368|gb|EGE80225.1| RNA recognition domain-containing protein containing protein
[Ajellomyces dermatitidis ATCC 18188]
Length = 299
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 106/213 (49%), Gaps = 38/213 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKY---GRILDIELKIPPRPPCYCFVEFENARDAEDAIRGR 65
+Y+GNLP ++ + E+ED F + G+I +I+L + F+E+E+A DA+D +
Sbjct: 9 LYLGNLPRNVTKQEIEDHFNSHHGSGKITEIKLMS-----GFGFIEYEDAMDAKDVVP-- 61
Query: 66 DGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
DG +F G RL V+ A RGP + G + A R R + Y
Sbjct: 62 DGTDFKGERLTVQFA-----RGPRHKE-----------TFSGPSDRSSAPR---PRRTIY 102
Query: 126 RVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDD 184
R+ + GLP + SWQDLKD R++G DV ++E D G V++ D+K A+ KLD
Sbjct: 103 RMQISGLPET-SWQDLKDFARQSGLDVVYSETGHDGRG---FVEFETGSDLKTAVEKLDG 158
Query: 185 TEFRNPWARGRITVK----RYDRSPSRSRSRSR 213
EF+ ++ R R P RSRS R
Sbjct: 159 REFKGSRVLCTQDIQSLEDRQSRDPYRSRSPGR 191
>gi|432852804|ref|XP_004067393.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Oryzias
latipes]
Length = 146
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 52/69 (75%), Gaps = 3/69 (4%)
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R E V V GLP + SWQDLKDHMR+AGDVCFA+V RD E GVV++ EDM+YA+R
Sbjct: 6 RRREEDVGVPGLPPTGSWQDLKDHMREAGDVCFADVQRDGE---GVVEFLRREDMEYALR 62
Query: 181 KLDDTEFRN 189
+LD TEFR+
Sbjct: 63 RLDRTEFRS 71
>gi|226288775|gb|EEH44287.1| hypothetical protein PADG_00576 [Paracoccidioides brasiliensis
Pb18]
Length = 303
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 109/221 (49%), Gaps = 38/221 (17%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKY---GRILDIELKIPPRPPCYCFVEFENARD 57
MS S +Y+GNLP ++ + E+ED F + G+I +I+L + F+E+E+A D
Sbjct: 1 MSEVSSTRLYLGNLPRNVTKQEIEDHFNSHHGSGKITEIKLMS-----GFGFIEYEDAMD 55
Query: 58 AEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRF 117
A+D + DG +F G RL V+ A RGP + G + A R
Sbjct: 56 AKDVVP--DGTDFKGERLTVQFA-----RGPRHKE-----------TFSGPPDRSSAPR- 96
Query: 118 GISRHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMK 176
R + YR+ + GLP + SWQDLKD R++G DV ++E D G V++ D+K
Sbjct: 97 --PRRTIYRMQISGLPET-SWQDLKDFARQSGLDVVYSETGHDGRG---FVEFETGSDLK 150
Query: 177 YAIRKLDDTEFRNPWARGRITVK----RYDRSPSRSRSRSR 213
A+ KLD EF+ ++ R R P RSRS R
Sbjct: 151 TAVEKLDGREFKGSRVLCTQDIQSQEDRQPREPYRSRSPGR 191
>gi|347441498|emb|CCD34419.1| hypothetical protein [Botryotinia fuckeliana]
Length = 324
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 101/211 (47%), Gaps = 33/211 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP + +VE F +G I +I+L + F+E+++A DA D +
Sbjct: 9 LYLGNLPRSATKADVEAHFNTHGTGEITEIKLMN-----GFGFIEYKDAMDARDVVPAFH 63
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G +F G RL V+ A G R +++ A R R + +R
Sbjct: 64 GSDFMGERLTVQFARGTRNRDTFANN-----------------PERTAPR---PRRTPHR 103
Query: 127 VIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
+ + GLP SWQDLKD R++ DV ++E RD +G V++ D+K A+ KLD
Sbjct: 104 MQISGLPGETSWQDLKDFARQSSLDVVYSETGRDRDGKGSFVEFETAADLKTAVEKLDGR 163
Query: 186 EFRNPWARGRITVKRYDRSPSRSRSRSRSRS 216
EF+ R+T D P R R+RSRS
Sbjct: 164 EFKG----ARVTCTA-DTQPDIPRDRARSRS 189
>gi|154284490|ref|XP_001543040.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150406681|gb|EDN02222.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 300
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 96/184 (52%), Gaps = 34/184 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKY---GRILDIELKIPPRPPCYCFVEFENARDAEDAIRGR 65
+Y+GNLP ++ + E+ED F + G+I +I+L + F+E+E+A DA+D +
Sbjct: 9 LYLGNLPRNVTKQEIEDHFNSHHGSGKITEIKLMS-----GFGFIEYEDAMDAKDVVP-- 61
Query: 66 DGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
DG +F G RL V+ A RGP + G + A R R + Y
Sbjct: 62 DGTDFKGERLTVQFA-----RGPRHKE-----------TFSGPSDRSSAPR---PRRTIY 102
Query: 126 RVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDD 184
R+ + GLP + SWQDLKD R++G DV ++E D G V++ D+K A+ KLD
Sbjct: 103 RMQISGLPET-SWQDLKDFARQSGLDVVYSEAGHDGRG---FVEFETGSDLKTAVEKLDG 158
Query: 185 TEFR 188
EF+
Sbjct: 159 REFK 162
>gi|449502419|ref|XP_004174507.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Taeniopygia guttata]
Length = 265
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 86/179 (48%), Gaps = 16/179 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
C RV + H + R + A +E R+I
Sbjct: 61 EL--CSERVTIEHARARSRGRGRGRYSDRFSSRRPRSDRRNAPP--------LRTENRLI 110
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MR+AG+V FA+ R + GVV++ + D+K AI KL E
Sbjct: 111 VENLSSRVSWQDLKDFMRQAGEVTFADAHR-PKLNEGVVEFASYSDLKNAIEKLSGKEI 168
>gi|224051266|ref|XP_002200500.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Taeniopygia guttata]
Length = 264
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 86/179 (48%), Gaps = 16/179 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
C RV + H + R + A +E R+I
Sbjct: 61 EL--CSERVTIEHARARSRGRGRGRYSDRFSSRRPRSDRRNAPP--------LRTENRLI 110
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MR+AG+V FA+ R + GVV++ + D+K AI KL E
Sbjct: 111 VENLSSRVSWQDLKDFMRQAGEVTFADAHR-PKLNEGVVEFASYSDLKNAIEKLSGKEI 168
>gi|148687918|gb|EDL19865.1| splicing factor, arginine/serine rich 9, isoform CRA_a [Mus
musculus]
Length = 184
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 51/67 (76%), Gaps = 3/67 (4%)
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKL 182
+ + + GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y EDM+YA+RKL
Sbjct: 72 AHFPFMTPGLPPSGSWQDLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKL 128
Query: 183 DDTEFRN 189
DDT+FR+
Sbjct: 129 DDTKFRS 135
>gi|367029667|ref|XP_003664117.1| hypothetical protein MYCTH_2306567 [Myceliophthora thermophila ATCC
42464]
gi|347011387|gb|AEO58872.1| hypothetical protein MYCTH_2306567 [Myceliophthora thermophila ATCC
42464]
Length = 296
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 93/184 (50%), Gaps = 31/184 (16%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP + +VE F +G I +I+L + F+E+++A DA D +
Sbjct: 9 LYLGNLPRHATKADVEAHFATHGTGEITEIKLMN-----GFGFIEYKDAMDARDVVPAFH 63
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G +F G RL V+ A G S R G+ A R + +R
Sbjct: 64 GSDFMGERLTVQFARG-------SRHREHGHDRNSAP---------------RPRRTPHR 101
Query: 127 VIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
+ + GLP+ SWQDLKD R++G DV ++E +R+ GT G V++ D++ A+ KLD
Sbjct: 102 MQITGLPNDTSWQDLKDFARQSGADVVYSETNRNG-GTEGFVEFETAADLRTAVEKLDGR 160
Query: 186 EFRN 189
EF+N
Sbjct: 161 EFKN 164
>gi|392870838|gb|EJB12075.1| pre-RNA splicing factor Srp2, variant [Coccidioides immitis RS]
Length = 399
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 105/216 (48%), Gaps = 33/216 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+ L + + +VE+ F ++G +I DI+L + F+E+E+A DA D +
Sbjct: 106 FFAWTLLFPVTKQDVEEHFNQHGSGKITDIKLMS-----GFGFIEYEDALDARDVVPAYH 160
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G +F G RL V+ A RGP + G + A R R + YR
Sbjct: 161 GTDFKGSRLTVQFA-----RGPRHKE-----------TFSGPSDRSNAPR---PRRTPYR 201
Query: 127 VIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
+ + GLP + SWQDLKD R++G DV ++E RD EG G V++ D+K AI KLD
Sbjct: 202 MQISGLPET-SWQDLKDFARQSGLDVVYSETLRDHEGR-GFVEFETGADLKTAIEKLDGR 259
Query: 186 EFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRSR 221
EF+ R+T + ++P R RSRS R
Sbjct: 260 EFKG----SRVTCTQDIQAPDDRPVRDPYRSRSPVR 291
>gi|52345470|ref|NP_001004783.1| serine/arginine-rich splicing factor 5 [Xenopus (Silurana)
tropicalis]
gi|49522053|gb|AAH74518.1| splicing factor, arginine/serine-rich 5 [Xenopus (Silurana)
tropicalis]
gi|89273344|emb|CAJ81460.1| splicing factor, arginine/serine-rich 5 [Xenopus (Silurana)
tropicalis]
Length = 272
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 90/180 (50%), Gaps = 15/180 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEF++ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFDDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHG-GSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRV 127
C RV + H RG RG Y + A R +E R+
Sbjct: 61 EL--CNERVTIEHARLRSRGGPRGLGRGRYNDRFSSRRPRGDRSAPPIR------TENRL 112
Query: 128 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
IV L S SWQDLKD MR+AG+V FA+ R + GVV++ + D+K AI KL E
Sbjct: 113 IVENLSSRVSWQDLKDFMRQAGEVTFADAHR-PKLNEGVVEFASYSDLKNAIEKLSGKEI 171
>gi|332858668|ref|XP_003317036.1| PREDICTED: serine/arginine-rich splicing factor 6 [Pan troglodytes]
Length = 407
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 81/143 (56%), Gaps = 6/143 (4%)
Query: 45 PCYCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGG 104
P Y FVEFE++RDA+DA+ +G G R+ VE A RGP YG GG
Sbjct: 98 PRYGFVEFEDSRDADDAVYELNGKELCGERVIVEHA-----RGPRRDRDGYSYGSRSGGG 152
Query: 105 AGGAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTY 164
+ +G ++G +EYR+IV L S SWQDLKD MR+AG+V +A+ ++
Sbjct: 153 GYSSRRTSGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERT-NE 211
Query: 165 GVVDYTNPEDMKYAIRKLDDTEF 187
GV+++ + DMK A+ KLD TE
Sbjct: 212 GVIEFRSYSDMKRALDKLDGTEI 234
>gi|160333128|ref|NP_001026368.2| splicing factor, arginine/serine-rich 5 [Gallus gallus]
Length = 264
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 86/179 (48%), Gaps = 16/179 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
C RV + H + R + A +E R+I
Sbjct: 61 EL--CSERVTIEHARARSRGRGRGRYSDRFSSRRPRSDRRSAPP--------LRTENRLI 110
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MR+AG+V FA+ R + GVV++ + D+K AI KL E
Sbjct: 111 VENLSSRVSWQDLKDFMRQAGEVTFADAHR-PKLNEGVVEFASYSDLKNAIEKLSGKEI 168
>gi|393245625|gb|EJD53135.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 265
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 95/184 (51%), Gaps = 22/184 (11%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
+R +Y+G +P+D R +V+ F YGRI+D + + FVEFE+++DAE+ ++
Sbjct: 1 MTRRLYLGRIPTDARSEDVQKFFEGYGRIVDCRVMT-----GFGFVEFESSKDAEEVVQV 55
Query: 65 RDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
+G F G + VE A +R G GG G A R
Sbjct: 56 FNGKAFMGAPILVEFAK---------ENRPRRDDDRGYGGGGAYPPRA-------RRPPG 99
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDD 184
R+IV G+ SWQDLKD R+AG++ FA++ RD G GV++Y + +D +A++ LD
Sbjct: 100 VRLIVSGISRDTSWQDLKDFGREAGNITFADIDRDVPGQ-GVLEYMSRDDADHAVKTLDG 158
Query: 185 TEFR 188
+ R
Sbjct: 159 KDLR 162
>gi|452839557|gb|EME41496.1| hypothetical protein DOTSEDRAFT_73793 [Dothistroma septosporum
NZE10]
Length = 327
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 107/218 (49%), Gaps = 38/218 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP + + +VE+ F +G I++I+L + F+E+++A DA D +
Sbjct: 11 LYLGNLPRNATKADVENHFNTHGTGEIMEIKLMN-----GFGFIEYKDAMDARDVVPAFH 65
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G F G RL V+ A G S+ R G+ A R R + +R
Sbjct: 66 GSEFMGERLVVQFARG-------SNRPREGF----------EHQPRMAPR---PRRTVHR 105
Query: 127 VIVRGLPSSASWQDLKDHMRKAG-DVCFAEVS--RDSEGT-YGVVDYTNPEDMKYAIRKL 182
+ + GLP SWQDLKD R++G DV ++EV+ RD GT G V+Y D+ A+ KL
Sbjct: 106 MTITGLPFETSWQDLKDFARQSGLDVVYSEVNRERDPSGTGKGYVEYETAADLATAVEKL 165
Query: 183 DDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRS 220
D++EF+ + R P R R R RSRS
Sbjct: 166 DNSEFKG-------SNVRCISDPQTEIPRPRERYRSRS 196
>gi|2435503|gb|AAC39946.1| HRS [Mus musculus]
Length = 270
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 89/180 (49%), Gaps = 27/180 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSS-----SDRRGGYGGGGAGGAGGAGAGAGAGRFGISR-H 122
C RV + H + SDR A A G R S
Sbjct: 61 EL--CSERVTIEHARARSRGGRGRGRYSDRL-------------AVADLGNDRRKCSTCK 105
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKL 182
+ R+IV L S SWQDLKD MR+AG+V FA+ R + GVV++ + D+K AI KL
Sbjct: 106 NRNRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR-PKLNEGVVEFASYGDLKNAIEKL 164
>gi|317036141|ref|XP_001397700.2| pre-RNA splicing factor Srp2 [Aspergillus niger CBS 513.88]
gi|358368362|dbj|GAA84979.1| pre-RNA splicing factor Srp2 [Aspergillus kawachii IFO 4308]
Length = 301
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 106/214 (49%), Gaps = 35/214 (16%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP ++ + ++E+ F +G +I +I+L + F+E+E+A DA D +
Sbjct: 9 LYLGNLPRNVTKQDIEEHFSTHGSGKITEIKLMN-----GFGFIEYEDAMDARDVVPAFH 63
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G +F G RL V+ A RGP R+ + G R + +R
Sbjct: 64 GSDFKGERLTVQFA-----RGPR---RKENFPGP-----------MDRPNMPRPRRTIFR 104
Query: 127 VIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
++V GLP + SWQDLKD R++G DV ++E R E G V++ D+K AI KLD
Sbjct: 105 MMVSGLPET-SWQDLKDFARQSGLDVVYSETGR--ELGRGFVEFETANDLKTAIEKLDGR 161
Query: 186 EFRNPWARGRITVKRYD-----RSPSRSRSRSRS 214
EF+ ++ Y R P RSRS RS
Sbjct: 162 EFKGSRVTCIADIQTYPDERAIRDPYRSRSPRRS 195
>gi|19115482|ref|NP_594570.1| mRNA export factor Srp2 [Schizosaccharomyces pombe 972h-]
gi|26399937|sp|P78814.2|SRP2_SCHPO RecName: Full=Pre-mRNA-splicing factor srp2
gi|2749972|gb|AAC39357.1| putative pre-mRNA splicing factor [Schizosaccharomyces pombe]
gi|6013092|emb|CAB57400.1| mRNA export factor Srp2 [Schizosaccharomyces pombe]
Length = 365
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 84/175 (48%), Gaps = 25/175 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VG +P ++ D F YG+ILD +L + FVE E+ARDA D + G
Sbjct: 6 LFVGRIPPQATREDMMDFFKGYGQILDCKLMN-----GFGFVEVEDARDARDIVNDFQGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
F G R+ VE A G + A ++ R + +R+I
Sbjct: 61 EFMGSRIVVEPARGERR-------------------RRENFRESAASKYPRPRRTGFRLI 101
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLD 183
V L SWQDLKD MRKAG+ F + R++ G GVV+++ EDM+ A+ L+
Sbjct: 102 VENLSEDVSWQDLKDVMRKAGEPTFTDAHRENPGA-GVVEFSTEEDMRNALTSLN 155
>gi|327281934|ref|XP_003225700.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Anolis
carolinensis]
Length = 266
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 86/179 (48%), Gaps = 14/179 (7%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
C RV + H + + A R +E R+I
Sbjct: 61 EL--CSERVTIEHARARSRGGRGRGGRYSDRFSSRRPRNDRRNAPPVR------TENRLI 112
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MR+AG+V FA+ R + GVV++ + D+K AI KL E
Sbjct: 113 VENLSSRVSWQDLKDFMRQAGEVTFADAHR-PKLNEGVVEFASYSDLKNAIEKLSGKEI 170
>gi|313212059|emb|CBY17785.1| unnamed protein product [Oikopleura dioica]
Length = 259
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 8 TIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDG 67
T+++G L R+ ++ED F KYG++ I L+ Y FV+F++ RDAEDAI+ DG
Sbjct: 6 TVFIGGLSDRARDKDIEDFFDKYGKVTQIRLR-----DRYGFVDFDDRRDAEDAIKDLDG 60
Query: 68 YNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRV 127
+ G R+R+ELA+ G S S RG GG G RF +
Sbjct: 61 SSLCGERVRLELANRSRGSRRSGSRDRGRRGGDRGGDERRGSNRPHRTRFTLE------- 113
Query: 128 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLD 183
V L S SW DLKD MRKAG+V + + + G V + N ED++ A +K D
Sbjct: 114 -VENLSSRVSWADLKDMMRKAGEVTYTDAHQRMGKNRGEVCFANSEDLRAAYKKFD 168
>gi|1749534|dbj|BAA13825.1| unnamed protein product [Schizosaccharomyces pombe]
Length = 361
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 84/175 (48%), Gaps = 25/175 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VG +P ++ D F YG+ILD +L + FVE E+ARDA D + G
Sbjct: 2 LFVGRIPPQATREDMMDFFKGYGQILDCKLMN-----GFGFVEVEDARDARDIVNDFQGK 56
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
F G R+ VE A G + A ++ R + +R+I
Sbjct: 57 EFMGSRIVVEPARGERR-------------------RRENFRESAASKYPRPRRTGFRLI 97
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLD 183
V L SWQDLKD MRKAG+ F + R++ G GVV+++ EDM+ A+ L+
Sbjct: 98 VENLSEDVSWQDLKDVMRKAGEPTFTDAHRENPGA-GVVEFSTEEDMRNALTSLN 151
>gi|425767261|gb|EKV05835.1| Pre-RNA splicing factor Srp2, putative [Penicillium digitatum
PHI26]
gi|425780059|gb|EKV18081.1| Pre-RNA splicing factor Srp2, putative [Penicillium digitatum Pd1]
Length = 303
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 108/220 (49%), Gaps = 30/220 (13%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDA 58
M+ S +Y+GNLP ++ + ++E+ F +G +I +I+L + F+E+++ DA
Sbjct: 1 MTEVSSTRLYLGNLPRNVTKSDIEEHFSSHGSGKITEIKLMN-----GFGFIEYDDQLDA 55
Query: 59 EDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFG 118
D + G +F G RL V+ A RGP R+ + G A
Sbjct: 56 RDIVPAFHGSDFKGERLTVQFA-----RGPR---RKEAFQGPPDRNA-----------LP 96
Query: 119 ISRHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKY 177
R + +R+ + GLP + SWQDLKD R++G DV ++E R E G V++ D+K
Sbjct: 97 RPRRTMFRMQISGLPET-SWQDLKDFARQSGLDVVYSETGR--EQGRGFVEFETASDLKT 153
Query: 178 AIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSR 217
A+ KLD EF+ ++ ++ P R RSRS R
Sbjct: 154 AVEKLDQREFKGSVVSCVADIQNFEERPVRDPYRSRSPPR 193
>gi|119187025|ref|XP_001244119.1| hypothetical protein CIMG_03560 [Coccidioides immitis RS]
Length = 398
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 103/212 (48%), Gaps = 31/212 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+ L + + +VE+ F ++G +I DI+L + F+E+E+A DA D + D
Sbjct: 107 FFAWTLLFPVTKQDVEEHFNQHGSGKITDIKLMS-----GFGFIEYEDALDARDVVP--D 159
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G +F G RL V+ A RGP + G + A R R + YR
Sbjct: 160 GTDFKGSRLTVQFA-----RGPRHKE-----------TFSGPSDRSNAPR---PRRTPYR 200
Query: 127 VIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
+ + GLP + SWQDLKD R++G DV ++E RD EG G V++ D+K AI KLD
Sbjct: 201 MQISGLPET-SWQDLKDFARQSGLDVVYSETLRDHEGR-GFVEFETGADLKTAIEKLDGR 258
Query: 186 EFRNPWARGRITVKRYDRSPSRSRSRSRSRSR 217
EF+ ++ D P R RSRS R
Sbjct: 259 EFKGSRVTCTQDIQAPDDRPVRDPYRSRSPVR 290
>gi|395504171|ref|XP_003756430.1| PREDICTED: serine/arginine-rich splicing factor 5 [Sarcophilus
harrisii]
Length = 266
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 88/190 (46%), Gaps = 37/190 (19%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISR------- 121
C RV + H + G + RF R
Sbjct: 61 EL--CSERVTIEHARARSRGGRG------------------RGRYSDRFSSRRPRNDRRN 100
Query: 122 ----HSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKY 177
+E R+IV L S SWQDLKD MR+AG+V FA+ R + GVV++ + D+K
Sbjct: 101 APPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR-PKLNEGVVEFASYSDLKN 159
Query: 178 AIRKLDDTEF 187
AI KL E
Sbjct: 160 AIEKLSGKEI 169
>gi|126282694|ref|XP_001370225.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Monodelphis
domestica]
Length = 265
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 88/190 (46%), Gaps = 37/190 (19%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISR------- 121
C RV + H + G + RF R
Sbjct: 61 EL--CSERVTIEHARARSRGGRG------------------RGRYSDRFSSRRPRNDRRN 100
Query: 122 ----HSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKY 177
+E R+IV L S SWQDLKD MR+AG+V FA+ R + GVV++ + D+K
Sbjct: 101 APPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR-PKLNEGVVEFASYSDLKN 159
Query: 178 AIRKLDDTEF 187
AI KL E
Sbjct: 160 AIEKLSGKEI 169
>gi|156402923|ref|XP_001639839.1| predicted protein [Nematostella vectensis]
gi|156226970|gb|EDO47776.1| predicted protein [Nematostella vectensis]
Length = 185
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 95/186 (51%), Gaps = 34/186 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VG LP + ++E F +GRI DI LK + FVEF++ARDA+DA+ +
Sbjct: 8 VFVGRLPPRANDRDLEKFFKGFGRINDINLK-----QGFAFVEFDDARDADDAVYELNHK 62
Query: 69 NFDGCRLRVELAHGGSGRGPSS-------SDRRGGYGGGGAGGAGGAGAGAGAGRFGISR 121
G R+ VE AH G G S RR Y
Sbjct: 63 ELLGERVSVEHAHPSRGGGGGGGRGFRDRSPRRDRYP---------------------PY 101
Query: 122 HSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRK 181
++EYR+IV L + A WQDLKD+MR+AG+V F + +D G GV D++N DM YA++K
Sbjct: 102 NTEYRLIVENLSTRAGWQDLKDYMRQAGEVTFTQCHKDRVGE-GVCDFSNESDMLYALKK 160
Query: 182 LDDTEF 187
LD TE
Sbjct: 161 LDGTEL 166
>gi|417398268|gb|JAA46167.1| Putative serine/arginine-rich splicing factor 5 [Desmodus rotundus]
Length = 278
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 88/190 (46%), Gaps = 37/190 (19%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPSAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISR------- 121
C RV + H + G + RF R
Sbjct: 61 EL--CSERVTIEHARARSRGGRG------------------RGRYSDRFSSRRPRNDRRN 100
Query: 122 ----HSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKY 177
+E R+IV L S SWQDLKD MR+AG+V FA+ R + GVV++ + D+K
Sbjct: 101 APPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR-PKLNEGVVEFASYGDLKN 159
Query: 178 AIRKLDDTEF 187
AI KL E
Sbjct: 160 AIEKLSGKEI 169
>gi|310772202|ref|NP_001006476.2| serine/arginine-rich splicing factor 5a [Gallus gallus]
gi|326920574|ref|XP_003206544.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Meleagris
gallopavo]
Length = 278
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 100/227 (44%), Gaps = 62/227 (27%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VG+L S RE +VE F YGRI +I LK + FVEFE+ RDA+DAI +G
Sbjct: 6 VFVGHLSSRARERDVEKFFKGYGRIREIHLK-----NGFGFVEFEDHRDADDAIYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
C RV + H + RG +R Y + +G+ R+G +E+R+I
Sbjct: 61 EL--CDERVTIEHARARRGRGRFAQRFSYY-----------SQSGSSRYGPPVRTEHRII 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
V L S SWQDLKD MRKAG+V + + R++ GVV++ + DMK A+ KLD TE
Sbjct: 108 VENLSSRISWQDLKDVMRKAGEVTYVDAHRNNRNE-GVVEFASYSDMKSALEKLDGTELN 166
Query: 189 -------------------------------------------NPWA 192
+
Sbjct: 167 GRRIKLIEDHRRHRSRSRSRSYSRSRSKSKSTGSSRSYSRSRSRSRS 213
>gi|449274700|gb|EMC83778.1| Splicing factor, arginine/serine-rich 5 [Columba livia]
Length = 265
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 86/179 (48%), Gaps = 16/179 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEF++ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFDDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
C RV + H + R + A +E R+I
Sbjct: 61 EL--CSERVTIEHARARSRGRGRGRYSDRFSSRRPRSDRRSAPP--------LRTENRLI 110
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MR+AG+V FA+ R + GVV++ + D+K AI KL E
Sbjct: 111 VENLSSRVSWQDLKDFMRQAGEVTFADAHR-PKLNEGVVEFASYSDLKNAIEKLSGKEI 168
>gi|349604033|gb|AEP99695.1| Splicing factor, arginine/serine-rich 9-like protein, partial
[Equus caballus]
Length = 105
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/59 (64%), Positives = 48/59 (81%), Gaps = 3/59 (5%)
Query: 131 GLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFRN 189
GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y EDM+YA+RKLDDT+FR+
Sbjct: 1 GLPPSGSWQDLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKLDDTKFRS 56
>gi|432107111|gb|ELK32534.1| Serine/arginine-rich splicing factor 5 [Myotis davidii]
Length = 280
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 88/190 (46%), Gaps = 37/190 (19%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISR------- 121
C RV + H + G + RF R
Sbjct: 61 EL--CSERVTIEHARARSRGGRG------------------RGRYSDRFSSRRPRNDRRN 100
Query: 122 ----HSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKY 177
+E R+IV L S SWQDLKD MR+AG+V FA+ R + GVV++ + D+K
Sbjct: 101 APPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR-PKLNEGVVEFASYGDLKN 159
Query: 178 AIRKLDDTEF 187
AI KL E
Sbjct: 160 AIEKLSGKEI 169
>gi|121705498|ref|XP_001271012.1| pre-RNA splicing factor Srp2, putative [Aspergillus clavatus NRRL
1]
gi|119399158|gb|EAW09586.1| pre-RNA splicing factor Srp2, putative [Aspergillus clavatus NRRL
1]
Length = 296
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 117/244 (47%), Gaps = 32/244 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP ++ + ++E+ F +G +I +I+L + F+E+E+A DA D + D
Sbjct: 9 LYLGNLPRNVTKQDIEEHFSSHGSGKITEIKLMN-----GFGFIEYEDAMDARDVVP--D 61
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G +F G RL V+ A RGP R+ + G R + +R
Sbjct: 62 GSDFKGERLTVQFA-----RGPR---RKENFPGP-----------MDRPNMPRPRRTVFR 102
Query: 127 VIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
+++ GLP + SWQDLKD R++G DV ++E R E G V++ D+K A+ KLD
Sbjct: 103 MLISGLPET-SWQDLKDFARQSGLDVVYSETGR--EPGRGFVEFETAADLKTAVDKLDGR 159
Query: 186 EFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRSRIVRRNRSKSLERSVSRSVSRSMSA 245
+F+ ++ +D R RSRS RS + +R R S R S
Sbjct: 160 DFKGSRVSCIADIQSHDDRALRDPYRSRSPRRSYPPMEEYDRRFPAPRGYSPRHYRERSP 219
Query: 246 SPVK 249
PV+
Sbjct: 220 VPVR 223
>gi|363742346|ref|XP_417747.3| PREDICTED: serine/arginine-rich splicing factor 4 [Gallus gallus]
Length = 214
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 76/140 (54%), Gaps = 22/140 (15%)
Query: 47 YCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAG 106
Y FVEF++ RDA+DA+ +G + G R+ VE A G G G S
Sbjct: 4 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRGYGYRRS--------------- 48
Query: 107 GAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGV 166
G ++G +EYR+IV L S SWQDLKD+MR+AG+V +A+ + + GV
Sbjct: 49 ------GRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNE-GV 101
Query: 167 VDYTNPEDMKYAIRKLDDTE 186
+++ + DMK A+ KLD TE
Sbjct: 102 IEFKSYSDMKRALEKLDGTE 121
>gi|340516476|gb|EGR46724.1| predicted protein [Trichoderma reesei QM6a]
Length = 311
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 103/220 (46%), Gaps = 32/220 (14%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDA 58
M+ S +Y+GNLP + +VE F +G I +++L + F+E+++A DA
Sbjct: 1 MTEVSSTRLYLGNLPRHATKSDVEAHFATHGTGEITEVKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFG 118
D + G +F G RL V+ A G + R GG G A
Sbjct: 56 RDVVPAFHGSDFMGERLTVQFARG-------TRHREGGMGHERAPPRPRRTPHR------ 102
Query: 119 ISRHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKY 177
+ + GLP+ SWQDLKD R++ DV ++E RDS G G V++ D++
Sbjct: 103 --------MQITGLPNDTSWQDLKDFARQSSLDVVYSETGRDSNGR-GFVEFETAADLRT 153
Query: 178 AIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSR 217
AI KLD EF+ +R + V P R R+RSRS R
Sbjct: 154 AIEKLDGREFKG--SRVQCIVDLQPDMPPRDRARSRSPGR 191
>gi|335307313|ref|XP_003360793.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Sus scrofa]
Length = 221
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 89/195 (45%), Gaps = 47/195 (24%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGG----------------SGRGPSSSDRRGGYGGGGAGGAGGAGAGA 112
C RV + H S R P + DRR
Sbjct: 61 EL--CSERVTIEHARARSRGGRGRGRYSDRFSSRRPRN-DRRNAP--------------- 102
Query: 113 GAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNP 172
+E R+IV L S SWQDLKD MR+AG+V FA+ R + GVV++ +
Sbjct: 103 -------PVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR-PKLNEGVVEFASY 154
Query: 173 EDMKYAIRKLDDTEF 187
D+K AI KL E
Sbjct: 155 GDLKNAIEKLSGKEI 169
>gi|350633625|gb|EHA21990.1| hypothetical protein ASPNIDRAFT_56436 [Aspergillus niger ATCC 1015]
Length = 299
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 107/214 (50%), Gaps = 37/214 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP ++ + ++E+ F +G +I +I+L + F+E+E+A DA D + D
Sbjct: 9 LYLGNLPRNVTKQDIEEHFSTHGSGKITEIKLMN-----GFGFIEYEDAMDARDVVP--D 61
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G +F G RL V+ A RGP R+ + G R + +R
Sbjct: 62 GSDFKGERLTVQFA-----RGPR---RKENFPGP-----------MDRPNMPRPRRTIFR 102
Query: 127 VIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
++V GLP + SWQDLKD R++G DV ++E R E G V++ D+K AI KLD
Sbjct: 103 MMVSGLPET-SWQDLKDFARQSGLDVVYSETGR--ELGRGFVEFETANDLKTAIEKLDGR 159
Query: 186 EFRNPWARGRITVKRYD-----RSPSRSRSRSRS 214
EF+ ++ Y R P RSRS RS
Sbjct: 160 EFKGSRVTCIADIQTYPDERAIRDPYRSRSPRRS 193
>gi|348573304|ref|XP_003472431.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Cavia
porcellus]
Length = 273
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 88/190 (46%), Gaps = 37/190 (19%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISR------- 121
C RV + H + G + RF R
Sbjct: 61 EL--CSERVTIEHARARSRGGRG------------------RGRYSDRFSSRRPRNDRRN 100
Query: 122 ----HSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKY 177
+E R+IV L S SWQDLKD MR+AG+V FA+ R + GVV++ + D+K
Sbjct: 101 APPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR-PKLNEGVVEFASYGDLKN 159
Query: 178 AIRKLDDTEF 187
AI KL E
Sbjct: 160 AIEKLSGKEI 169
>gi|291410875|ref|XP_002721708.1| PREDICTED: splicing factor, arginine/serine-rich 5 [Oryctolagus
cuniculus]
Length = 275
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 88/190 (46%), Gaps = 37/190 (19%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISR------- 121
C RV + H + G + RF R
Sbjct: 61 EL--CSERVTIEHARARSRGGRG------------------RGRYSDRFSSRRPRNDRRN 100
Query: 122 ----HSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKY 177
+E R+IV L S SWQDLKD MR+AG+V FA+ R + GVV++ + D+K
Sbjct: 101 APPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR-PKLNEGVVEFASYGDLKN 159
Query: 178 AIRKLDDTEF 187
AI KL E
Sbjct: 160 AIEKLSGKEI 169
>gi|344273957|ref|XP_003408785.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Loxodonta
africana]
Length = 271
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 89/195 (45%), Gaps = 47/195 (24%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIKDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGG----------------SGRGPSSSDRRGGYGGGGAGGAGGAGAGA 112
C RV + H S R P + DRR
Sbjct: 61 EL--CSERVTIEHARARSRGGRGRGRYSDRFSSRRPRN-DRRNAP--------------- 102
Query: 113 GAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNP 172
+E R+IV L S SWQDLKD MR+AG+V FA+ R + GVV++ +
Sbjct: 103 -------PVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR-PKLNEGVVEFASY 154
Query: 173 EDMKYAIRKLDDTEF 187
D+K AI KL E
Sbjct: 155 GDLKNAIEKLSGKEI 169
>gi|391343504|ref|XP_003746049.1| PREDICTED: serine-arginine protein 55-like [Metaseiulus
occidentalis]
Length = 296
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G LP RE ++E F + GRI I LK Y FV+F RDA DA+ +G
Sbjct: 6 VFIGRLPRGSREQDIEKFFSRCGRIRGIMLKR-----GYAFVDFRTDRDASDAVHDMNGR 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE+A G +G R A G EY+++
Sbjct: 61 SMRGERMTVEIASGRQRKGSRDQKHRSSSARNDASSNG-----------------EYQIV 103
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEV-SRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SW+D KD +R+ D+ V + G+V + D+K AI+K + E
Sbjct: 104 VENLSSRISWKDFKDMIRRE-DIEVVHVDAHKLHKHQGIVKFRTHSDLKRAIKKFQNRE- 161
Query: 188 RNPWARGRITVKRYDRSPSRSRSRSRSRSR 217
I +R + + +RS SR RS SR
Sbjct: 162 --------IEGRRLEITETRSGSRERSGSR 183
>gi|351708666|gb|EHB11585.1| Splicing factor, arginine/serine-rich 5 [Heterocephalus glaber]
Length = 270
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 88/190 (46%), Gaps = 37/190 (19%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISR------- 121
C RV + H + G + RF R
Sbjct: 61 EL--CSERVTIEHARARSRGGRG------------------RGRYSDRFSSRRPRNDRRS 100
Query: 122 ----HSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKY 177
+E R+IV L S SWQDLKD MR+AG+V FA+ R + GVV++ + D+K
Sbjct: 101 APPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR-PKLNEGVVEFASYGDLKN 159
Query: 178 AIRKLDDTEF 187
AI KL E
Sbjct: 160 AIEKLSGKEI 169
>gi|426374380|ref|XP_004054052.1| PREDICTED: serine/arginine-rich splicing factor 9 [Gorilla gorilla
gorilla]
Length = 115
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/59 (64%), Positives = 48/59 (81%), Gaps = 3/59 (5%)
Query: 131 GLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFRN 189
GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y EDM+YA+RKLDDT+FR+
Sbjct: 11 GLPPSGSWQDLKDHMREAGDVCYADVQKDG---VGMVEYLRKEDMEYALRKLDDTKFRS 66
>gi|307133720|ref|NP_001182516.1| splicing factor, arginine/serine-rich 5 [Equus caballus]
Length = 271
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 89/195 (45%), Gaps = 47/195 (24%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGG----------------SGRGPSSSDRRGGYGGGGAGGAGGAGAGA 112
C RV + H S R P + DRR
Sbjct: 61 EL--CSERVTIEHARARSRGGRGRGRYSDRFSSRRPRN-DRRNA---------------- 101
Query: 113 GAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNP 172
+E R+IV L S SWQDLKD MR+AG+V FA+ R + GVV++ +
Sbjct: 102 ------PPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR-PKLNEGVVEFASY 154
Query: 173 EDMKYAIRKLDDTEF 187
D+K AI KL E
Sbjct: 155 GDLKNAIEKLSGKEI 169
>gi|402876562|ref|XP_003902030.1| PREDICTED: serine/arginine-rich splicing factor 5 [Papio anubis]
Length = 272
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 88/190 (46%), Gaps = 37/190 (19%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISR------- 121
C RV + H + G + RF R
Sbjct: 61 EL--CSERVTIEHARARSRGGRG------------------RGRYSDRFSSRRPRNDRRN 100
Query: 122 ----HSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKY 177
+E R+IV L S SWQDLKD MR+AG+V FA+ R + GVV++ + D+K
Sbjct: 101 APPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR-PKLNEGVVEFASYGDLKN 159
Query: 178 AIRKLDDTEF 187
AI KL E
Sbjct: 160 AIEKLSGKEI 169
>gi|410904228|ref|XP_003965594.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Takifugu
rubripes]
Length = 227
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 54/77 (70%), Gaps = 10/77 (12%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELK-----IPPRPPCYCFVEFENARDAEDAIR 63
IYVGNLP D++E ++EDLFYKYG+I +IELK IP + F+ FE+ RDA+DA+
Sbjct: 6 IYVGNLPMDVQERDIEDLFYKYGKIREIELKNNRGTIP-----FAFIRFEDPRDADDAVY 60
Query: 64 GRDGYNFDGCRLRVELA 80
GR+GY + +LRVE
Sbjct: 61 GRNGYVYGDSKLRVEYP 77
>gi|307133730|ref|NP_001182521.1| splicing factor, arginine/serine-rich 5 [Pongo abelii]
gi|109084084|ref|XP_001109903.1| PREDICTED: splicing factor, arginine/serine-rich 5 isoform 2
[Macaca mulatta]
gi|297298154|ref|XP_001110094.2| PREDICTED: splicing factor, arginine/serine-rich 5 isoform 3
[Macaca mulatta]
gi|297298156|ref|XP_001110146.2| PREDICTED: splicing factor, arginine/serine-rich 5 isoform 4
[Macaca mulatta]
gi|119601409|gb|EAW81003.1| splicing factor, arginine/serine-rich 5, isoform CRA_b [Homo
sapiens]
Length = 271
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 89/195 (45%), Gaps = 47/195 (24%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGG----------------SGRGPSSSDRRGGYGGGGAGGAGGAGAGA 112
C RV + H S R P + DRR
Sbjct: 61 EL--CSERVTIEHARARSRGGRGRGRYSDRFSSRRPRN-DRRNAP--------------- 102
Query: 113 GAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNP 172
+E R+IV L S SWQDLKD MR+AG+V FA+ R + GVV++ +
Sbjct: 103 -------PVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR-PKLNEGVVEFASY 154
Query: 173 EDMKYAIRKLDDTEF 187
D+K AI KL E
Sbjct: 155 GDLKNAIEKLSGKEI 169
>gi|149643059|ref|NP_001092399.1| serine/arginine-rich splicing factor 5 [Bos taurus]
gi|73963391|ref|XP_867135.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 9 [Canis
lupus familiaris]
gi|301763317|ref|XP_002917076.1| PREDICTED: splicing factor, arginine/serine-rich 5-like [Ailuropoda
melanoleuca]
gi|345803610|ref|XP_867196.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 15 [Canis
lupus familiaris]
gi|410962543|ref|XP_003987828.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1 [Felis
catus]
gi|410962545|ref|XP_003987829.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2 [Felis
catus]
gi|410962547|ref|XP_003987830.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 3 [Felis
catus]
gi|148878097|gb|AAI46186.1| SFRS5 protein [Bos taurus]
gi|281349392|gb|EFB24976.1| hypothetical protein PANDA_005250 [Ailuropoda melanoleuca]
gi|296482956|tpg|DAA25071.1| TPA: splicing factor, arginine/serine-rich 5 [Bos taurus]
gi|440897364|gb|ELR49075.1| Serine/arginine-rich splicing factor 5 [Bos grunniens mutus]
Length = 272
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 89/195 (45%), Gaps = 47/195 (24%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGG----------------SGRGPSSSDRRGGYGGGGAGGAGGAGAGA 112
C RV + H S R P + DRR
Sbjct: 61 EL--CSERVTIEHARARSRGGRGRGRYSDRFSSRRPRN-DRRNAP--------------- 102
Query: 113 GAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNP 172
+E R+IV L S SWQDLKD MR+AG+V FA+ R + GVV++ +
Sbjct: 103 -------PVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR-PKLNEGVVEFASY 154
Query: 173 EDMKYAIRKLDDTEF 187
D+K AI KL E
Sbjct: 155 GDLKNAIEKLSGKEI 169
>gi|86991438|ref|NP_001034554.1| serine/arginine-rich splicing factor 5 [Homo sapiens]
gi|86991440|ref|NP_008856.2| serine/arginine-rich splicing factor 5 [Homo sapiens]
gi|296215383|ref|XP_002754098.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Callithrix jacchus]
gi|332229001|ref|XP_003263676.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Nomascus leucogenys]
gi|332229003|ref|XP_003263677.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Nomascus leucogenys]
gi|332842591|ref|XP_510034.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 6 [Pan
troglodytes]
gi|332842593|ref|XP_001143701.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2 [Pan
troglodytes]
gi|390469250|ref|XP_002754097.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Callithrix jacchus]
gi|397507326|ref|XP_003824150.1| PREDICTED: serine/arginine-rich splicing factor 5 [Pan paniscus]
gi|403264529|ref|XP_003924530.1| PREDICTED: serine/arginine-rich splicing factor 5 [Saimiri
boliviensis boliviensis]
gi|426377318|ref|XP_004055414.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Gorilla gorilla gorilla]
gi|426377320|ref|XP_004055415.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Gorilla gorilla gorilla]
gi|3929378|sp|Q13243.1|SRSF5_HUMAN RecName: Full=Serine/arginine-rich splicing factor 5; AltName:
Full=Delayed-early protein HRS; AltName:
Full=Pre-mRNA-splicing factor SRP40; AltName:
Full=Splicing factor, arginine/serine-rich 5
gi|1049080|gb|AAA93070.1| SRp40-1 [Homo sapiens]
gi|17511888|gb|AAH18823.1| Splicing factor, arginine/serine-rich 5 [Homo sapiens]
gi|30583017|gb|AAP35752.1| splicing factor, arginine/serine-rich 5 [Homo sapiens]
gi|61362109|gb|AAX42162.1| splicing factor arginine/serine-rich 5 [synthetic construct]
gi|61362114|gb|AAX42163.1| splicing factor arginine/serine-rich 5 [synthetic construct]
gi|71297198|gb|AAH40209.1| Splicing factor, arginine/serine-rich 5 [Homo sapiens]
gi|90075796|dbj|BAE87578.1| unnamed protein product [Macaca fascicularis]
gi|119601408|gb|EAW81002.1| splicing factor, arginine/serine-rich 5, isoform CRA_a [Homo
sapiens]
gi|119601411|gb|EAW81005.1| splicing factor, arginine/serine-rich 5, isoform CRA_a [Homo
sapiens]
gi|119601412|gb|EAW81006.1| splicing factor, arginine/serine-rich 5, isoform CRA_a [Homo
sapiens]
gi|208967490|dbj|BAG73759.1| splicing factor, arginine/serine-rich 5 [synthetic construct]
gi|355693393|gb|EHH27996.1| hypothetical protein EGK_18328 [Macaca mulatta]
gi|355778697|gb|EHH63733.1| hypothetical protein EGM_16760 [Macaca fascicularis]
gi|380815560|gb|AFE79654.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|380815562|gb|AFE79655.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|380815564|gb|AFE79656.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|383420727|gb|AFH33577.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|383420729|gb|AFH33578.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|383420731|gb|AFH33579.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|410218428|gb|JAA06433.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410218430|gb|JAA06434.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410252412|gb|JAA14173.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410252414|gb|JAA14174.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410303912|gb|JAA30556.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410303914|gb|JAA30557.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410357772|gb|JAA44585.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410357774|gb|JAA44586.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410358000|gb|JAA44587.1| splicing factor, arginine/serine-rich 5 [Pan troglodytes]
Length = 272
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 89/195 (45%), Gaps = 47/195 (24%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGG----------------SGRGPSSSDRRGGYGGGGAGGAGGAGAGA 112
C RV + H S R P + DRR
Sbjct: 61 EL--CSERVTIEHARARSRGGRGRGRYSDRFSSRRPRN-DRRNAP--------------- 102
Query: 113 GAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNP 172
+E R+IV L S SWQDLKD MR+AG+V FA+ R + GVV++ +
Sbjct: 103 -------PVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR-PKLNEGVVEFASY 154
Query: 173 EDMKYAIRKLDDTEF 187
D+K AI KL E
Sbjct: 155 GDLKNAIEKLSGKEI 169
>gi|119226243|ref|NP_001073162.1| serine/arginine-rich splicing factor 5 [Mus musculus]
gi|119226245|ref|NP_033185.2| serine/arginine-rich splicing factor 5 [Mus musculus]
gi|119226247|ref|NP_001073163.1| serine/arginine-rich splicing factor 5 [Mus musculus]
gi|158631248|ref|NP_062130.2| serine/arginine-rich splicing factor 5 [Rattus norvegicus]
gi|306774128|ref|NP_001182434.1| serine/arginine-rich splicing factor 5 [Rattus norvegicus]
gi|306774130|ref|NP_001182435.1| serine/arginine-rich splicing factor 5 [Rattus norvegicus]
gi|354472150|ref|XP_003498303.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Cricetulus
griseus]
gi|1168968|sp|Q09167.1|SRSF5_RAT RecName: Full=Serine/arginine-rich splicing factor 5; AltName:
Full=Delayed-early protein HRS; AltName:
Full=Insulin-induced growth response protein CL-4;
AltName: Full=Pre-mRNA-splicing factor SRP40; AltName:
Full=Splicing factor, arginine/serine-rich 5
gi|410516929|sp|O35326.2|SRSF5_MOUSE RecName: Full=Serine/arginine-rich splicing factor 5; AltName:
Full=Delayed-early protein HRS; AltName:
Full=Pre-mRNA-splicing factor SRP40; AltName:
Full=Splicing factor, arginine/serine-rich 5
gi|349079|gb|AAA62266.1| growth response protein [Rattus norvegicus]
gi|34849628|gb|AAH58479.1| Sfrs5 protein [Rattus norvegicus]
gi|52139013|gb|AAH82593.1| Splicing factor, arginine/serine-rich 5 (SRp40, HRS) [Mus musculus]
gi|74144656|dbj|BAE27313.1| unnamed protein product [Mus musculus]
gi|148670738|gb|EDL02685.1| mCG7614, isoform CRA_a [Mus musculus]
gi|148670740|gb|EDL02687.1| mCG7614, isoform CRA_a [Mus musculus]
gi|148670743|gb|EDL02690.1| mCG7614, isoform CRA_a [Mus musculus]
gi|148670745|gb|EDL02692.1| mCG7614, isoform CRA_a [Mus musculus]
gi|148670746|gb|EDL02693.1| mCG7614, isoform CRA_a [Mus musculus]
gi|149025034|gb|EDL81401.1| splicing factor, arginine/serine-rich 5, isoform CRA_b [Rattus
norvegicus]
gi|149025037|gb|EDL81404.1| splicing factor, arginine/serine-rich 5, isoform CRA_b [Rattus
norvegicus]
gi|344235744|gb|EGV91847.1| Splicing factor, arginine/serine-rich 5 [Cricetulus griseus]
Length = 269
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 89/195 (45%), Gaps = 47/195 (24%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGG----------------SGRGPSSSDRRGGYGGGGAGGAGGAGAGA 112
C RV + H S R P + DRR
Sbjct: 61 EL--CSERVTIEHARARSRGGRGRGRYSDRFSSRRPRN-DRRNAP--------------- 102
Query: 113 GAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNP 172
+E R+IV L S SWQDLKD MR+AG+V FA+ R + GVV++ +
Sbjct: 103 -------PVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR-PKLNEGVVEFASY 154
Query: 173 EDMKYAIRKLDDTEF 187
D+K AI KL E
Sbjct: 155 GDLKNAIEKLSGKEI 169
>gi|335292735|ref|XP_001927454.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1 [Sus
scrofa]
gi|335292737|ref|XP_001927469.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2 [Sus
scrofa]
Length = 272
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 89/195 (45%), Gaps = 47/195 (24%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGG----------------SGRGPSSSDRRGGYGGGGAGGAGGAGAGA 112
C RV + H S R P + DRR
Sbjct: 61 EL--CSERVTIEHARARSRGGRGRGRYSDRFSSRRPRN-DRRNAP--------------- 102
Query: 113 GAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNP 172
+E R+IV L S SWQDLKD MR+AG+V FA+ R + GVV++ +
Sbjct: 103 -------PVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR-PKLNEGVVEFASY 154
Query: 173 EDMKYAIRKLDDTEF 187
D+K AI KL E
Sbjct: 155 GDLKNAIEKLSGKEI 169
>gi|12841460|dbj|BAB25217.1| unnamed protein product [Mus musculus]
gi|148670741|gb|EDL02688.1| mCG7614, isoform CRA_c [Mus musculus]
gi|148670742|gb|EDL02689.1| mCG7614, isoform CRA_c [Mus musculus]
gi|148670747|gb|EDL02694.1| mCG7614, isoform CRA_c [Mus musculus]
Length = 270
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 89/195 (45%), Gaps = 47/195 (24%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGG----------------SGRGPSSSDRRGGYGGGGAGGAGGAGAGA 112
C RV + H S R P + DRR
Sbjct: 61 EL--CSERVTIEHARARSRGGRGRGRYSDRFSSRRPRN-DRRNAP--------------- 102
Query: 113 GAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNP 172
+E R+IV L S SWQDLKD MR+AG+V FA+ R + GVV++ +
Sbjct: 103 -------PVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR-PKLNEGVVEFASY 154
Query: 173 EDMKYAIRKLDDTEF 187
D+K AI KL E
Sbjct: 155 GDLKNAIEKLSGKEI 169
>gi|119601416|gb|EAW81010.1| splicing factor, arginine/serine-rich 5, isoform CRA_e [Homo
sapiens]
Length = 209
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 88/190 (46%), Gaps = 37/190 (19%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISR------- 121
C RV + H + G + RF R
Sbjct: 61 EL--CSERVTIEHARARSRGGRG------------------RGRYSDRFSSRRPRNDRRN 100
Query: 122 ----HSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKY 177
+E R+IV L S SWQDLKD MR+AG+V FA+ R + GVV++ + D+K
Sbjct: 101 APPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR-PKLNEGVVEFASYGDLKN 159
Query: 178 AIRKLDDTEF 187
AI KL E
Sbjct: 160 AIEKLSGKEI 169
>gi|30583835|gb|AAP36166.1| Homo sapiens splicing factor, arginine/serine-rich 5 [synthetic
construct]
gi|60653861|gb|AAX29623.1| splicing factor arginine/serine-rich 5 [synthetic construct]
Length = 273
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 89/195 (45%), Gaps = 47/195 (24%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGG----------------SGRGPSSSDRRGGYGGGGAGGAGGAGAGA 112
C RV + H S R P + DRR
Sbjct: 61 EL--CSERVTIEHARARSRGGRGRGRYSDRFSSRRPRN-DRRNAP--------------- 102
Query: 113 GAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNP 172
+E R+IV L S SWQDLKD MR+AG+V FA+ R + GVV++ +
Sbjct: 103 -------PVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR-PKLNEGVVEFASY 154
Query: 173 EDMKYAIRKLDDTEF 187
D+K AI KL E
Sbjct: 155 GDLKNAIEKLSGKEI 169
>gi|255936927|ref|XP_002559490.1| Pc13g10700 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584110|emb|CAP92139.1| Pc13g10700 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 301
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 108/220 (49%), Gaps = 32/220 (14%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDA 58
M+ S +Y+GNLP ++ + ++E+ F +G +I +I+L + F+E+++ DA
Sbjct: 1 MTEVSSTRLYLGNLPRNVTKSDIEEHFSSHGSGKITEIKLMN-----GFGFIEYDDQLDA 55
Query: 59 EDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFG 118
D + DG F G RL V+ A RGP R+ + G A
Sbjct: 56 RDIVP--DGSEFKGERLTVQFA-----RGPR---RKEAFPGPSERNA-----------LP 94
Query: 119 ISRHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKY 177
R + +R+ + GLP + SWQDLKD R++G DV ++E R E G V++ D+K
Sbjct: 95 RPRRTIFRMQISGLPET-SWQDLKDFARQSGLDVVYSETGR--EQGRGFVEFETANDLKT 151
Query: 178 AIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSR 217
A+ KLD EF+ ++ ++ P R RSRS R
Sbjct: 152 AVEKLDQREFKGSVVSCVADIQSFEERPMRDPYRSRSPPR 191
>gi|395849594|ref|XP_003797407.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Otolemur garnettii]
gi|395849596|ref|XP_003797408.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Otolemur garnettii]
Length = 270
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 87/185 (47%), Gaps = 37/185 (20%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISR------- 121
C RV + H + G + RF R
Sbjct: 61 EL--CSERVTIEHARARSRGGRG------------------RGRYSDRFSSRRPRNDRRN 100
Query: 122 ----HSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKY 177
+E R+IV L S SWQDLKD MR+AG+V FA+ R + GVV++ + D+K
Sbjct: 101 APPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR-PKLNEGVVEFASYGDLKN 159
Query: 178 AIRKL 182
AI KL
Sbjct: 160 AIEKL 164
>gi|47224367|emb|CAG09213.1| unnamed protein product [Tetraodon nigroviridis]
Length = 151
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 77/150 (51%), Gaps = 10/150 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
I++G L RE +VE F YGRI DI+LK + FVEF++ RDAEDA+ DG
Sbjct: 6 IFIGRLSPTAREKDVERFFKGYGRIRDIDLK-----KGFGFVEFDDPRDAEDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
C RV + H R + GG G G+ +G R +E R+I
Sbjct: 61 EL--CNERVTIEHARVR---LRGGRGRTWTGGRFSDRYGRGSQSGRSRNPPPVRTENRLI 115
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSR 158
V L S SWQDLKD MR+AG+V FA+ R
Sbjct: 116 VENLSSRVSWQDLKDFMRQAGEVTFADAHR 145
>gi|221042258|dbj|BAH12806.1| unnamed protein product [Homo sapiens]
Length = 143
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 56/79 (70%), Gaps = 4/79 (5%)
Query: 110 AGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDY 169
+G G R G + +++ R+ V LP SWQDLKDHMR+AGDVC+A+V RD GVV++
Sbjct: 2 SGGGVIR-GPAGNNDCRIYVGNLPPGGSWQDLKDHMREAGDVCYADVYRDGT---GVVEF 57
Query: 170 TNPEDMKYAIRKLDDTEFR 188
EDM YA+RKLD+T+FR
Sbjct: 58 VRKEDMTYAVRKLDNTKFR 76
>gi|134083249|emb|CAK46820.1| unnamed protein product [Aspergillus niger]
Length = 367
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 110/222 (49%), Gaps = 37/222 (16%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDA 58
M+ S +Y+GNLP ++ + ++E+ F +G +I +I+L + F+E+E+A DA
Sbjct: 1 MTEVSSTRLYLGNLPRNVTKQDIEEHFSTHGSGKITEIKLMN-----GFGFIEYEDAMDA 55
Query: 59 EDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFG 118
D + DG +F G RL V+ A RGP R+ + G
Sbjct: 56 RDVVP--DGSDFKGERLTVQFA-----RGPR---RKENFPGP-----------MDRPNMP 94
Query: 119 ISRHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKY 177
R + +R++V GLP + SWQDLKD R++G DV ++E R E G V++ D+K
Sbjct: 95 RPRRTIFRMMVSGLPET-SWQDLKDFARQSGLDVVYSETGR--ELGRGFVEFETANDLKT 151
Query: 178 AIRKLDDTEFRNPWARGRITVKRYD-----RSPSRSRSRSRS 214
AI KLD EF+ ++ Y R P RSRS RS
Sbjct: 152 AIEKLDGREFKGSRVTCIADIQTYPDERAIRDPYRSRSPRRS 193
>gi|355721871|gb|AES07404.1| splicing factor SRp55-1 [Mustela putorius furo]
Length = 250
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 80/141 (56%), Gaps = 6/141 (4%)
Query: 47 YCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAG 106
Y FVEFE++RDA+DA+ +G G R+ VE A RGP YG GG
Sbjct: 1 YGFVEFEDSRDADDAVYELNGKELCGERVIVEHA-----RGPRRDRDGYSYGSRXGGGGY 55
Query: 107 GAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGV 166
+ +G ++G +E+R+IV L S SWQDLKD MR+AG+V +A+ ++ GV
Sbjct: 56 SSRRTSGRDKYGPPVRTEFRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNE-GV 114
Query: 167 VDYTNPEDMKYAIRKLDDTEF 187
+++ + DMK A+ KLD TE
Sbjct: 115 IEFRSYSDMKRALDKLDGTEI 135
>gi|408390763|gb|EKJ70150.1| hypothetical protein FPSE_09676 [Fusarium pseudograminearum CS3096]
Length = 312
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 91/183 (49%), Gaps = 28/183 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP + + +VE F +G I +++L + F+E+++ DA D +
Sbjct: 9 LYLGNLPRNATKTDVEAHFATHGTGEITEVKLMN-----GFGFIEYKDPMDARDVVPAFH 63
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G +F G RL V+ A G S R GG G A R + +R
Sbjct: 64 GSDFMGERLTVQFARG-------SRHREGGNFGNHERTAP------------RPRRTPHR 104
Query: 127 VIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
+ + GLP+ SWQDLKD R++ DV ++E RDS G G V++ D++ A+ KLD
Sbjct: 105 MQITGLPNDTSWQDLKDFARQSSLDVVYSETGRDSNGR-GFVEFETAADLRTAVEKLDGR 163
Query: 186 EFR 188
EF+
Sbjct: 164 EFK 166
>gi|357511861|ref|XP_003626219.1| Arginine/serine-rich splicing factor [Medicago truncatula]
gi|355501234|gb|AES82437.1| Arginine/serine-rich splicing factor [Medicago truncatula]
Length = 168
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/59 (64%), Positives = 47/59 (79%)
Query: 145 MRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDR 203
MR+AGDVCF++V RD G G+V+YTN EDMKYAIRKLDD+EFRN ++ I V+ YDR
Sbjct: 1 MRRAGDVCFSQVFRDRGGMTGIVEYTNYEDMKYAIRKLDDSEFRNAFSWAYIRVREYDR 59
>gi|398406965|ref|XP_003854948.1| hypothetical protein MYCGRDRAFT_99129 [Zymoseptoria tritici IPO323]
gi|339474832|gb|EGP89924.1| hypothetical protein MYCGRDRAFT_99129 [Zymoseptoria tritici IPO323]
Length = 333
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 101/225 (44%), Gaps = 51/225 (22%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP + + +VE+ F +G I +I+L + F+E+++A DA D +
Sbjct: 9 LYLGNLPRNATKADVENHFNTHGTGEITEIKLMN-----GFGFIEYKDAMDARDVVPAFH 63
Query: 67 GYNFDGCRLRVELAHG------GSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
G F G RL V+ A G G + P + R
Sbjct: 64 GSEFMGERLVVQFARGSNRPRDGFEQQPRQAPR--------------------------P 97
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEV--SRDSEGT--YGVVDYTNPEDM 175
R + +R+ + GLP SWQDLKD R++G DV ++EV RDS GT V+Y D+
Sbjct: 98 RRTVHRMTITGLPFETSWQDLKDFARQSGLDVVYSEVGRERDSSGTGKGSFVEYETAADL 157
Query: 176 KYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRS 220
A+ KLD+ EF+ R P R R R RSRS
Sbjct: 158 AAAVEKLDNNEFKG-------ATVRCISDPQSEIPRPRERYRSRS 195
>gi|389583241|dbj|GAB65976.1| RNA binding protein [Plasmodium cynomolgi strain B]
Length = 728
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 91/180 (50%), Gaps = 13/180 (7%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
I+VGN+ D RE +V F KYG I++++ K + F+E+E AE AI+ +G
Sbjct: 140 IFVGNISPDAREEDVRRKFLKYGDIVNMQWKTR-----FAFIEYEKISHAEIAIKEENGQ 194
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
F G L V+ H G+ + +D RG Y A R + + R++
Sbjct: 195 FFFGEELNVQPHHAGN-YFHNRNDNRGFYP---PPYARNYSPNRNENR---EKKNALRIV 247
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGT-YGVVDYTNPEDMKYAIRKLDDTEF 187
V+ + ASWQDLKD R G V +A + +D +G+++Y N E++K A+ L+ +F
Sbjct: 248 VKNVDEKASWQDLKDFGRDVGSVNYANIIQDDNKERFGIIEYYNYENVKKAVEVLNGRKF 307
>gi|432885940|ref|XP_004074826.1| PREDICTED: serine/arginine-rich splicing factor 9-like isoform 1
[Oryzias latipes]
Length = 117
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 73/124 (58%), Gaps = 17/124 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IY+GNLP D++E ++EDLF+KYG+I +IELK + F+ FE+ RDA+DA+ GR+GY
Sbjct: 6 IYIGNLPIDVQERDIEDLFFKYGKIREIELKNNRGTIPFAFIRFEDPRDADDAVYGRNGY 65
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFG-ISRHSEYRV 127
+ +LRVE P S+ GG G G GRFG +R SE+RV
Sbjct: 66 VYGNSKLRVEY--------PRST--------GGKPTPMGPGGAGPRGRFGPPTRRSEFRV 109
Query: 128 IVRG 131
IV G
Sbjct: 110 IVTG 113
>gi|390457607|ref|XP_003731973.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 1-like [Callithrix jacchus]
Length = 373
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 85/177 (48%), Gaps = 25/177 (14%)
Query: 13 NLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDG 72
+LPS+ + ED+ YKY I D++LK P PP + +DA+ G ++D
Sbjct: 32 HLPSESPTKDTEDMIYKYCTIRDMDLKNPRDPPGPLL-----SSVTQDAVYGLHSCDYDR 86
Query: 73 CRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVIVRGL 132
C +V G G G S+ G+ G ++R S RV+V L
Sbjct: 87 CLTQVGSPPNGLGTGQGGSESPQGFHGSP-----------------LTRWSXNRVVVSWL 129
Query: 133 PSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFRN 189
P S Q+LK HM + G V +AEV ++ GV++ EDM + RKLD+T+FR+
Sbjct: 130 PPDGSXQELKXHMHETGGVYYAEVYQNGS---GVMEDVKKEDMNFLARKLDNTKFRS 183
>gi|378727012|gb|EHY53471.1| hypothetical protein HMPREF1120_01663 [Exophiala dermatitidis
NIH/UT8656]
Length = 316
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 98/223 (43%), Gaps = 32/223 (14%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLF--YKYGRILDIELKIPPRPPCYCFVEFENARDA 58
M+ S +Y+GNLP +I + +++D F + G I +I+L + F+E+E+ DA
Sbjct: 1 MADVSSTRLYLGNLPRNITKQDIQDHFGTHGAGSIKEIKLMN-----GFGFIEYEDPMDA 55
Query: 59 EDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFG 118
D + G F G RL V+ A RGP D G
Sbjct: 56 RDVVPAFHGTEFKGERLTVQFA-----RGPRRKD---------------DFNGPSDRNIP 95
Query: 119 ISRHSEYRVIVRGLPSSASWQDLKDHMRKAG--DVCFAEVSRDSEGTYGVVDYTNPEDMK 176
R + YR+ + GL SWQDLKD R +G DV ++E R+ +G G V++ D+K
Sbjct: 96 RPRRTIYRMQITGLQPDTSWQDLKDFARNSGQLDVVYSETGRERDGK-GFVEFETQADLK 154
Query: 177 YAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSR 219
A+ KLD F+ A D P R RS R R
Sbjct: 155 TAVEKLDGQTFKG--ATVHCVADIQDERPDMRSYRQRSPPRGR 195
>gi|449664983|ref|XP_002156792.2| PREDICTED: serine/arginine-rich splicing factor 4-like [Hydra
magnipapillata]
Length = 244
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 99/179 (55%), Gaps = 9/179 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G+L D R ++E F +G I+ + Y FV F++ RDA+DAI +G
Sbjct: 6 LFIGHLSPDARTRDLERFFKDHGFSKTIQEVVV--KTGYGFVVFDDRRDADDAIYELNGK 63
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G RL+VE A SGR SD+ G G G + R+G ++++R++
Sbjct: 64 ELMGARLQVEYAK-PSGR----SDKYDG-GYRDRERERSRDRGGFSSRYGRPYNTDFRLV 117
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
+ + + SWQD+KD+ R+AG+V FA+ R+ G GVV++ + DMK A+RKLD +E
Sbjct: 118 IENVSTRCSWQDIKDYFRQAGEVTFAKCHREKMGE-GVVEFASSSDMKNALRKLDGSEL 175
>gi|46134285|ref|XP_389458.1| hypothetical protein FG09282.1 [Gibberella zeae PH-1]
Length = 330
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 91/183 (49%), Gaps = 28/183 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP + + +VE F +G I +++L + F+E+++ DA D +
Sbjct: 9 LYLGNLPRNATKTDVEAHFATHGTGEITEVKLM-----NGFGFIEYKDPMDARDVVPAFH 63
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G +F G RL V+ A G S R GG G A R + +R
Sbjct: 64 GSDFMGERLTVQFARG-------SRHREGGNFGNHERTAPR------------PRRTPHR 104
Query: 127 VIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
+ + GLP+ SWQDLKD R++ DV ++E RDS G G V++ D++ A+ KLD
Sbjct: 105 MQITGLPNDTSWQDLKDFARQSSLDVVYSETGRDSNG-RGFVEFETAADLRTAVEKLDGR 163
Query: 186 EFR 188
EF+
Sbjct: 164 EFK 166
>gi|358398894|gb|EHK48245.1| hypothetical protein TRIATDRAFT_298403 [Trichoderma atroviride IMI
206040]
Length = 312
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 105/213 (49%), Gaps = 33/213 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP + + +VE F +G I +++L + F+E+++A DA D +
Sbjct: 9 LYLGNLPRNATKADVEAHFATHGTGEITEVKLMN-----GFGFIEYKDAMDARDVVPAFH 63
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G +F G RL V+ A G R GG G A R + +R
Sbjct: 64 GSDFMGERLTVQFARGARHR---------------EGGMGHERAPP------RPRRTPHR 102
Query: 127 VIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
+ + GLP+ SWQDLKD R++ DV ++E RDS G G V++ D++ A+ KLD
Sbjct: 103 MQITGLPNDTSWQDLKDFARQSSLDVVYSETGRDSNGR-GFVEFETAADLRTAVEKLDGR 161
Query: 186 EFRNPWARGRITV-KRYDRSPSRSRSRSRSRSR 217
EF+ AR + V + D P R+RSRS R
Sbjct: 162 EFKG--ARVQCLVDTQPDMPPRDPRARSRSPGR 192
>gi|225711430|gb|ACO11561.1| Serine-arginine protein 55 [Caligus rogercresseyi]
Length = 186
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 88/179 (49%), Gaps = 26/179 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LPSD+ EV ++F KY D+ LK + FVEF++ RDA+ A+ DG
Sbjct: 19 VYVGGLPSDVTTSEVGEIFAKYRNRFDVVLKTR-----FAFVEFDHNRDADHALERLDGT 73
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
F G R+ VE+A RGP ++D+ GG ++G ++Y++I
Sbjct: 74 LFRGQRIVVEIA-----RGPKTADKYLFRGGMDREPT----QATWVQKYGAPEITQYKLI 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
DLK MRKAG V +A+ R++ G+V + N DM AI DD E
Sbjct: 125 -----------DLKALMRKAGRVTYAQAHRNNLRE-GIVCFENKHDMLRAIDIFDDYEL 171
>gi|341889018|gb|EGT44953.1| hypothetical protein CAEBREN_15444 [Caenorhabditis brenneri]
gi|341896973|gb|EGT52908.1| hypothetical protein CAEBREN_18115 [Caenorhabditis brenneri]
Length = 305
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 92/189 (48%), Gaps = 17/189 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IY+G L S + E ++E F YG I D+ LK + FVEF++ RDAEDA+ +G
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGNIRDVLLKN-----GFGFVEFDDKRDAEDAVHDLNGK 59
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGG---------AGAGAGAGRFGI 119
G R+ ++ + G G S RGG +GGAGG G R+G
Sbjct: 60 ELGGERVILDYSKPRGGGGFGGSGGRGGRVSSYSGGAGGRDRYDRFDRGGPPRRESRYGR 119
Query: 120 SRHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKYA 178
+ +RV+V L S SWQDLKD +R+ G + +AE + ++ + P D+K
Sbjct: 120 PYSTRHRVLVENLSSRISWQDLKDQVRRQGVEPTYAEAHK--RPNEALLCFATPSDLKRC 177
Query: 179 IRKLDDTEF 187
I K D +
Sbjct: 178 IEKCDGMDL 186
>gi|392577928|gb|EIW71056.1| hypothetical protein TREMEDRAFT_56308 [Tremella mesenterica DSM
1558]
Length = 273
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 95/178 (53%), Gaps = 22/178 (12%)
Query: 6 SRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGR 65
+R +Y+G+LP ++ + +VED+F G ILD+ + Y FVEFE++RDAEDA+R
Sbjct: 3 NRRVYIGHLPPNVTKTDVEDVFKGLGPILDVRILG-----NYGFVEFESSRDAEDALRDY 57
Query: 66 DGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
+G + G + VE RR YG G G GG G R G+
Sbjct: 58 NGVSLLGENIIVEAPR---------ERRRDAYGPGVGGYRGGDAPPRGPPRRGV------ 102
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGD-VCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKL 182
R+ V G+P S SWQDLKD+ R + V +A+V R + G GV++Y + + A+ +L
Sbjct: 103 RINVVGIPGSTSWQDLKDYGRLGSNMVTYADVDRYNPGV-GVIEYPTMGEAEEAMSRL 159
>gi|426233598|ref|XP_004023549.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 5 [Ovis aries]
Length = 274
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 86/185 (46%), Gaps = 37/185 (20%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YG I DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGXIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISR------- 121
C RV + H + G + RF R
Sbjct: 61 EL--CSERVTIEHARARSRGGRG------------------RGRYSDRFSSRRPRNDRRN 100
Query: 122 ----HSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKY 177
+E R+IV L S SWQDLKD MR+AG+V FA+ R + GVV++ + D+K
Sbjct: 101 APPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR-PKLNEGVVEFASYGDLKN 159
Query: 178 AIRKL 182
AI KL
Sbjct: 160 AIEKL 164
>gi|326471023|gb|EGD95032.1| pre-RNA splicing factor Srp2 [Trichophyton tonsurans CBS 112818]
Length = 317
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 115/240 (47%), Gaps = 60/240 (25%)
Query: 1 MSGRFSRTIYVGNLPSD---------------IREYEVEDLF--YKYGRILDIELKIPPR 43
MS S +Y+GNLP + + + ++E+ F + G+I +I+L
Sbjct: 1 MSEVSSTRLYLGNLPRNADSKGHLFCLDSLPPVNKQDIEEHFGSHGTGKITEIKLMQ--- 57
Query: 44 PPCYCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAG 103
+ F+E+E+A DA+D + DG +F G RL V+ A G R P
Sbjct: 58 --GFGFIEYEDAMDAKDVVP--DGTDFKGERLTVQFARGPRRREPFP------------- 100
Query: 104 GAGGAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEG 162
G + A R R + YR+ + GLP + SWQDLKD R++G DV ++E +RD +G
Sbjct: 101 ---GPPERSAAPR---PRRTIYRMQITGLPET-SWQDLKDFARQSGLDVVYSE-TRDRDG 152
Query: 163 TYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVK---------RYDRSPSRSRSRSR 213
G V++ N D++ A+ KLD T+F+ R+T R R P RSRS R
Sbjct: 153 K-GFVEFENGNDLRTAVEKLDGTDFKG----SRVTCTADIQPPMEDRVPRDPYRSRSPRR 207
>gi|156096635|ref|XP_001614351.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148803225|gb|EDL44624.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 778
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 91/180 (50%), Gaps = 14/180 (7%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
I+VGN+ + RE +V F KYG I++++ K + F+E+E AE AI+ +G
Sbjct: 227 IFVGNISPEAREEDVRRKFLKYGDIVNMQWKT-----RFAFIEYEKTSHAEIAIKEENGQ 281
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
F G L V+ H G+ + SD R Y G + + + R++
Sbjct: 282 FFFGEELNVQPHHAGN-YFHNRSDNRSFYPPYGRTYSPNRNESR-------EKKNALRIV 333
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSR-DSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V+ + ASWQDLKD R G V +A + + D++ +G+++Y N E +K A+ L+ +F
Sbjct: 334 VKNIDEKASWQDLKDFGRDVGSVNYANIIQDDNKERFGIIEYYNSETVKKAVEVLNGRKF 393
>gi|89267363|emb|CAJ82789.1| splicing factor, arginine/serine-rich 5 [Xenopus (Silurana)
tropicalis]
Length = 234
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 80/164 (48%), Gaps = 22/164 (13%)
Query: 32 RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDG---CRLRVELAHG-----G 83
RI +I LK + FVEF++ RDA+DA+ Y +G C RV + H
Sbjct: 1 RIREINLK-----NGFGFVEFDDHRDADDAV-----YELNGKVLCNERVTIEHARNRRGR 50
Query: 84 SGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKD 143
G G Y A +G G R+G +E+R+IV L S SWQDLKD
Sbjct: 51 GGMMGGGGGGGGRYPNRFAYRQSNSG---GPSRYGPPVRTEHRIIVENLSSRVSWQDLKD 107
Query: 144 HMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
MRKAG+V + + R S GVV++ + DMK A+ KLD E
Sbjct: 108 FMRKAGEVTYVDAHR-SNRNEGVVEFASYTDMKNALDKLDGVEL 150
>gi|70943756|ref|XP_741887.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56520548|emb|CAH80503.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 562
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 90/191 (47%), Gaps = 21/191 (10%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
I+VGN+ D RE EV F KYG I++I+ K + F+E+ AE+AI +G
Sbjct: 143 IFVGNISPDAREEEVRRKFAKYGDIINIQWK-----RRFAFIEYSKPIYAENAIHEENGK 197
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGG-------AGGAGAGAGAGRF-GIS 120
++ G L V+ H P + G YG +F I
Sbjct: 198 HYMGEELSVQAHH----LSPFKNSYSGNYGNSYNNYKSDPRNYENKYSRNYSDNKFESIE 253
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEV----SRDSEGTYGVVDYTNPEDMK 176
+ + R++V+ + SWQDLKD R+ G V +A V + +++ YG+++Y N E MK
Sbjct: 254 KKNSLRIVVKNIDEKVSWQDLKDFGREVGSVNYANVIYNNNGNNKEWYGIIEYYNYETMK 313
Query: 177 YAIRKLDDTEF 187
A+ L+ +F
Sbjct: 314 RAVEVLNGKKF 324
>gi|440637919|gb|ELR07838.1| hypothetical protein GMDG_00459 [Geomyces destructans 20631-21]
Length = 296
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 84/181 (46%), Gaps = 25/181 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+GNLP D + +VE F +G E+K+ + F+E+E+A DA D + G
Sbjct: 9 LYLGNLPRDATKADVEAHFATHGTGTIKEIKLMN---GFGFIEYEDAMDARDVVPAFHGS 65
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G RL V+ A G R A A R R + +R+
Sbjct: 66 ELKGDRLTVQFARGSRQRD------------------NFAATDRTAPR---PRRTPHRMQ 104
Query: 129 VRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
+ GL SWQDLKD R++ DV ++E RD +G V++ D++ A+ KLD EF
Sbjct: 105 ISGLSGETSWQDLKDFARQSSLDVVYSETGRDRDGKGSFVEFETAADLRTAVEKLDGREF 164
Query: 188 R 188
+
Sbjct: 165 K 165
>gi|221055067|ref|XP_002258672.1| RNA binding protein [Plasmodium knowlesi strain H]
gi|193808742|emb|CAQ39444.1| RNA binding protein, putative [Plasmodium knowlesi strain H]
Length = 837
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 87/181 (48%), Gaps = 15/181 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
I+VGN+ + RE +V F KYG I++++ K + F+E+E AE AI+ +G
Sbjct: 311 IFVGNISPEAREEDVRRKFLKYGDIVNMQWKT-----RFAFIEYEKTSHAEIAIKEENGQ 365
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGI-SRHSEYRV 127
F G L V+ H G+ + G R I + + R+
Sbjct: 366 LFFGEELNVQPHHAGNYFNNRND--------NRNYYPPTYGRNYSPNRNEIREKKNALRI 417
Query: 128 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGT-YGVVDYTNPEDMKYAIRKLDDTE 186
++R + ASWQDLKD R G V +A + +D +G+++Y N E++K A+ L+ +
Sbjct: 418 VIRNVDEKASWQDLKDFGRDIGSVNYANIFQDENKERFGIIEYYNYENVKKAVEVLNGRK 477
Query: 187 F 187
F
Sbjct: 478 F 478
>gi|324526478|gb|ADY48681.1| Splicing factor, arginine/serine-rich 6 [Ascaris suum]
Length = 158
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 62/104 (59%), Gaps = 15/104 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP+D E+ED F+++GRI + + RPP + F+EFE++RDAEDA+R DG
Sbjct: 12 VYVGGLPNDATSQELEDAFHRFGRIRKVW--VARRPPGFAFIEFEDSRDAEDAVRALDGT 69
Query: 69 NFDGCRLRVELAH----------GGSGRGPSSSDRRGG---YGG 99
G R RVEL+H GGS G SSDR G YGG
Sbjct: 70 RICGVRARVELSHGRRRNGAPDYGGSRGGRFSSDRPHGAPDYGG 113
>gi|391339441|ref|XP_003744058.1| PREDICTED: uncharacterized protein LOC100905097 [Metaseiulus
occidentalis]
Length = 355
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 86/185 (46%), Gaps = 20/185 (10%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S ++VG+LP + ++ED F + GRI D+ K Y FVEF + RDA DAI
Sbjct: 1 MSARVFVGHLPRKVDRRDIEDYFDRIGRIRDVVHK-----GNYAFVEFADERDARDAISE 55
Query: 65 RDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRF--GISRH 122
+G ++ G R+ VELA+ S G GR G R
Sbjct: 56 LNGTSWKGERIIVELANRRRRSRSQSG------------DRRGRNPRRKPGRITRGPPRR 103
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKL 182
++Y++ ++ L + SWQDLKD + V +A+ + + YG+V++ E+M K
Sbjct: 104 TDYQISIKNLSTRVSWQDLKDIFGEVAKVVYAD-AHNKRRNYGIVEFDTKEEMNRCYEKF 162
Query: 183 DDTEF 187
+ F
Sbjct: 163 NGKSF 167
>gi|116202487|ref|XP_001227055.1| hypothetical protein CHGG_09128 [Chaetomium globosum CBS 148.51]
gi|88177646|gb|EAQ85114.1| hypothetical protein CHGG_09128 [Chaetomium globosum CBS 148.51]
Length = 324
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 98/192 (51%), Gaps = 22/192 (11%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDA 58
M+ S +Y+GNLP + + +VE F +G I +I+L + F+E+++A DA
Sbjct: 1 MTEVSSTRLYLGNLPRNATKADVEAHFATHGTGEITEIKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFG 118
D + DG +F G RL V+ A G R GG GG G
Sbjct: 56 RDVVP--DGSDFMGERLTVQFARGSRHREQGGG-----------GGGGGGGYNHDRNSAP 102
Query: 119 ISRHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKY 177
R + +R+ + GLP+ SWQDLKD R++G DV ++E +R+ G V++ D++
Sbjct: 103 RPRRTPHRMQISGLPNDTSWQDLKDFARQSGLDVVYSETNRNGSNE-GFVEFETAADLRS 161
Query: 178 AIRKLDDTEFRN 189
A+ KLD+ EF+N
Sbjct: 162 AVEKLDNREFKN 173
>gi|426328680|ref|XP_004025378.1| PREDICTED: uncharacterized protein LOC101134512, partial [Gorilla
gorilla gorilla]
Length = 434
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 90/179 (50%), Gaps = 45/179 (25%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 2 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 56
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP R G YG G S+HS
Sbjct: 57 DLCGERVIVEHA-----RGPR---RDGSYGS------------------GRSKHS----- 85
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
+G+ L D+MR+AG+V +A+ + + GV+++ + DMK A+ KLD TE
Sbjct: 86 -KGIL-------LSDYMRQAGEVTYADAHKGRKNE-GVIEFVSYSDMKRALEKLDGTEV 135
>gi|268533694|ref|XP_002631976.1| Hypothetical protein CBG10243 [Caenorhabditis briggsae]
Length = 545
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 86/187 (45%), Gaps = 16/187 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKI-PPRPPCYCFVEFENARDAEDAIRGRDG 67
I++GNLP+DI E + D F G I I++K P Y F+EF DAE A++ R+G
Sbjct: 173 IFLGNLPTDIDEDLLRDFFKTSGEIKYIDVKKGKAGRPGYGFMEFVKLEDAEKAVKTRNG 232
Query: 68 YNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRV 127
+ +RVE + G RGP R G A G G G S +RV
Sbjct: 233 FPICDKFIRVEFSTSGGPRGPGGMVLREGEISEEYSVARGRG--------GPQLRSVHRV 284
Query: 128 IVRGLPSSASWQDLKDHMRKAGD-----VCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKL 182
V P S +WQD+KD R D VCF+ ++ + V++ ED+ AIR
Sbjct: 285 YVDNCPPSTTWQDIKDLFRGKNDPTGIEVCFSAINPIQRRAF--VEFRLKEDVAKAIRLF 342
Query: 183 DDTEFRN 189
+ + N
Sbjct: 343 HNKPYIN 349
>gi|342326382|gb|AEL23106.1| hnRNP protein [Cherax quadricarinatus]
Length = 284
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 92/179 (51%), Gaps = 23/179 (12%)
Query: 10 YVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGYN 69
YVG L + E +++ F YGR+ DI +K + FVEF++ RDA+DA+ +G
Sbjct: 1 YVGGLSYRVGERDLDRFFRSYGRLRDIVIK-----NGFGFVEFDDDRDADDAVYEMNGKE 55
Query: 70 FDGCRLRVELAHGGS-GRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A R P + RG + + RFG++ ++YR+
Sbjct: 56 LLGGRVTVEKARAAPRMRWPRAPPPRGFH----------------SSRFGMAARTDYRLT 99
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MR+AG+V +A+ + GVV++ DMK A+ +LD E
Sbjct: 100 VEDLSSRVSWQDLKDFMRQAGEVTYADAHKYRRNE-GVVEFATYADMKNAMHRLDGKEL 157
>gi|322694046|gb|EFY85887.1| pre-mRNA splicing factor [Metarhizium acridum CQMa 102]
Length = 314
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 106/218 (48%), Gaps = 33/218 (15%)
Query: 1 MSGRFSRT-IYVGNLPSDIREYEVEDLFYKYGR--ILDIELKIPPRPPCYCFVEFENARD 57
M+ S T +Y+GNLP + + ++E F +G I +++L + F+E+++ D
Sbjct: 1 MTTEVSNTRLYLGNLPRNATKADIEAHFATHGTGDITEVKLMN-----GFGFIEYKDPMD 55
Query: 58 AEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRF 117
A D + DG +F G RL V+ A RGP R G+ G
Sbjct: 56 ARDVVP--DGSDFMGERLTVQFA-----RGPRQ--RESGFSGHERAPP------------ 94
Query: 118 GISRHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMK 176
R + +R+ + GLP+ SWQDLKD R+ G DV ++E RDS G G V+Y D++
Sbjct: 95 -RPRRTPHRMQITGLPNETSWQDLKDFARQPGLDVVYSETGRDSNGR-GFVEYETAADLR 152
Query: 177 YAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRS 214
A+ KLD EF+ + I + D P R RSRS
Sbjct: 153 TAVDKLDGREFKGNRVQC-IADTQPDMPPRDGRGRSRS 189
>gi|345309522|ref|XP_001517768.2| PREDICTED: serine/arginine-rich splicing factor 5-like, partial
[Ornithorhynchus anatinus]
Length = 251
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 81/174 (46%), Gaps = 37/174 (21%)
Query: 20 EYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDGCRLRVEL 79
E +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG C RV +
Sbjct: 1 EKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGKEL--CSERVTI 53
Query: 80 AHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISR-----------HSEYRVI 128
H + G + RF R +E R+I
Sbjct: 54 EHARARSRGGRG------------------RGRYSDRFSSRRPRNDRRNAPPVRTENRLI 95
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKL 182
V L S SWQDLKD MR+AG+V FA+ R + GVV++ + D+K AI KL
Sbjct: 96 VENLSSRVSWQDLKDFMRQAGEVTFADAHR-PKLNEGVVEFASYSDLKNAIEKL 148
>gi|380482542|emb|CCF41176.1| pre-mRNA splicing factor [Colletotrichum higginsianum]
Length = 312
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 92/184 (50%), Gaps = 30/184 (16%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP + + +VE F +G I +I+L + F+E+++A DA D + D
Sbjct: 9 LYLGNLPRNATKADVEAHFATHGTGEITEIKLMN-----GFGFIEYKDAMDARDVVP--D 61
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAG-AGAGRFGISRHSEY 125
G +F G RL V+ A G R GG+ AG R + +
Sbjct: 62 GSDFMGERLTVQFARGTRHR------------------EGGSAAGFNNERAPPRPRRTPH 103
Query: 126 RVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDD 184
R+ + GLP+ SWQDLKD R++ DV ++E RD G G V++ D++ A+ KLD
Sbjct: 104 RMQITGLPTDTSWQDLKDFARQSSLDVVYSETGRDGNGR-GFVEFETAADLRTAVEKLDG 162
Query: 185 TEFR 188
EF+
Sbjct: 163 REFK 166
>gi|428186342|gb|EKX55192.1| hypothetical protein GUITHDRAFT_160399 [Guillardia theta CCMP2712]
Length = 321
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 73/141 (51%), Gaps = 16/141 (11%)
Query: 47 YCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAG 106
Y FV+FE + DAEDAI DGY +G +LRV+ HG S G DR G GG G+ G
Sbjct: 6 YGFVKFEKSSDAEDAISQYDGYELEGNKLRVQ--HGRSQAGRRGDDRGGYDGGQGSRGPR 63
Query: 107 GAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGV 166
G + RV V G+ SWQDLKD RKAG+ + + DS+G YGV
Sbjct: 64 PTG--------------QNRVYVDGIDEKTSWQDLKDFARKAGNPAYTDTVMDSKGKYGV 109
Query: 167 VDYTNPEDMKYAIRKLDDTEF 187
++Y ED A R LD T
Sbjct: 110 IEYRTAEDCYSACRMLDGTMI 130
>gi|451847680|gb|EMD60987.1| hypothetical protein COCSADRAFT_163394 [Cochliobolus sativus
ND90Pr]
Length = 340
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 93/191 (48%), Gaps = 29/191 (15%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDA 58
M+ S +Y+GNLP + + +VE F +G I +I+L + F+E+++A DA
Sbjct: 1 MTEVSSTRLYLGNLPRNATKADVEGHFQTHGTGEITEIKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFG 118
D + G +F G RL V+ A G R + +
Sbjct: 56 RDVVPAFHGSDFMGERLIVQFARGSRARNENFT--------------------PHERVPP 95
Query: 119 ISRHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKY 177
R + YR+ + LP SWQDLKD R++G DV ++EV R+ +GT G V+Y D+K
Sbjct: 96 RPRRTPYRMRIANLPVETSWQDLKDFARQSGLDVVYSEVGRERDGT-GFVEYETAADLKT 154
Query: 178 AIRKLDDTEFR 188
A+ KLD EF+
Sbjct: 155 AVEKLDRREFK 165
>gi|330941512|ref|XP_003306066.1| hypothetical protein PTT_19086 [Pyrenophora teres f. teres 0-1]
gi|311316625|gb|EFQ85835.1| hypothetical protein PTT_19086 [Pyrenophora teres f. teres 0-1]
Length = 342
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 91/186 (48%), Gaps = 29/186 (15%)
Query: 6 SRTIYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIR 63
S +Y+GNLP + + +VE F +G I +I+L + F+E+++A DA D +
Sbjct: 6 STRLYLGNLPRNATKADVEGHFQTHGTGEITEIKLMN-----GFGFIEYKDAMDARDVVP 60
Query: 64 GRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHS 123
G +F G RL V+ A G R + + R +
Sbjct: 61 AFHGSDFMGERLIVQFARGSRARNENFT--------------------PHERVPPRPRRT 100
Query: 124 EYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKL 182
YR+ + LP SWQDLKD R++G DV ++EV R+ +GT G V+Y D+K A+ KL
Sbjct: 101 PYRMRIANLPVETSWQDLKDFARQSGLDVVYSEVGRERDGT-GFVEYETAADLKAAVEKL 159
Query: 183 DDTEFR 188
D EF+
Sbjct: 160 DRREFK 165
>gi|198432071|ref|XP_002131223.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 4
(Pre-mRNA-splicing factor SRP75) (SRP001LB) [Ciona
intestinalis]
Length = 277
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKL 182
++YRVIV L S SWQDLKD++R+AGDV FAE + + G+VD+ +DMK AI KL
Sbjct: 152 TKYRVIVENLSSRVSWQDLKDYLRQAGDVSFAEAHQSVQNE-GIVDFATYDDMKAAIEKL 210
Query: 183 DDTEF 187
DDTE
Sbjct: 211 DDTEL 215
>gi|308510478|ref|XP_003117422.1| CRE-RSP-2 protein [Caenorhabditis remanei]
gi|308242336|gb|EFO86288.1| CRE-RSP-2 protein [Caenorhabditis remanei]
Length = 281
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G LP+ + +VE F YG+++D+ +K + FV+F++ RDA+DA+ +G
Sbjct: 4 VYIGRLPNRATDRDVEHFFRGYGKLVDVIMK-----NGFGFVDFQDQRDADDAVHDLNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ +E G S GGY G G G + R+ + +R++
Sbjct: 59 DLCGERVILEFPRRKVGYNEERSG--GGYRGREPTFRRG-GERQFSNRYSRPCSTRFRLV 115
Query: 129 VRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L + SWQD+KDH+RK G + ++E + + +V ++ +D++ A+ KL E
Sbjct: 116 VDNLSTRYSWQDIKDHIRKLGIEPTYSEAHKRNVNQ-ALVCFSTHDDLRDAMNKLQGEEL 174
>gi|310798588|gb|EFQ33481.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 312
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 92/183 (50%), Gaps = 28/183 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP + + +VE F +G I +I+L + F+E+++A DA D + D
Sbjct: 9 LYLGNLPRNATKADVEAHFATHGTGEITEIKLMN-----GFGFIEYKDAMDARDVVP--D 61
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G +F G RL V+ A G R GG A G A R + +R
Sbjct: 62 GSDFMGERLTVQFARGTRHRE-----------GGSAPGFNNERAPP------RPRRTPHR 104
Query: 127 VIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
+ + GLP+ SWQDLKD R++ DV ++E RD G G V++ D++ A+ KLD
Sbjct: 105 MQITGLPTDTSWQDLKDFARQSSLDVVYSETGRDGNGR-GFVEFETAADLRTAVEKLDGR 163
Query: 186 EFR 188
EF+
Sbjct: 164 EFK 166
>gi|451996756|gb|EMD89222.1| hypothetical protein COCHEDRAFT_1158038 [Cochliobolus
heterostrophus C5]
Length = 338
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 94/191 (49%), Gaps = 31/191 (16%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDA 58
M+ S +Y+GNLP + + +VE F +G I +I+L + F+E+++A DA
Sbjct: 1 MTEVSSTRLYLGNLPRNATKADVEGHFQTHGTGEITEIKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFG 118
D + DG +F G RL V+ A G R + +
Sbjct: 56 RDVVP--DGSDFMGERLIVQFARGSRARNENFT--------------------PHERVPP 93
Query: 119 ISRHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKY 177
R + YR+ + LP SWQDLKD R++G DV ++EV R+ +GT G V+Y D+K
Sbjct: 94 RPRRTPYRMRIANLPVETSWQDLKDFARQSGLDVVYSEVGRERDGT-GFVEYETAADLKT 152
Query: 178 AIRKLDDTEFR 188
A+ KLD EF+
Sbjct: 153 AVEKLDRREFK 163
>gi|189211717|ref|XP_001942187.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187979386|gb|EDU46012.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 340
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 94/191 (49%), Gaps = 31/191 (16%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDA 58
M+ S +Y+GNLP + + +VE F +G I +I+L + F+E+++A DA
Sbjct: 1 MTEVSSTRLYLGNLPRNATKADVEGHFQTHGTGEITEIKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFG 118
D + DG +F G RL V+ A G R + +
Sbjct: 56 RDVVP--DGSDFMGERLIVQFARGSRARNENFT--------------------PHERVPP 93
Query: 119 ISRHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKY 177
R + YR+ + LP SWQDLKD R++G DV ++EV R+ +GT G V+Y D+K
Sbjct: 94 RPRRTPYRMRIANLPVETSWQDLKDFARQSGLDVVYSEVGRERDGT-GFVEYETAADLKA 152
Query: 178 AIRKLDDTEFR 188
A+ KLD EF+
Sbjct: 153 AVEKLDRREFK 163
>gi|194374487|dbj|BAG57139.1| unnamed protein product [Homo sapiens]
Length = 158
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 75/134 (55%), Gaps = 16/134 (11%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP R G YG +G +G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGPR---RDGSYG---SGRSGYGYRRSGRDKYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLK 142
V L S SWQDLK
Sbjct: 108 VENLSSRCSWQDLK 121
>gi|402085268|gb|EJT80166.1| hypothetical protein, variant [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 317
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 98/217 (45%), Gaps = 24/217 (11%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLF--YKYGRILDIELKIPPRPPCYCFVEFENARDA 58
M+ S +Y+GNLP + +V F + G+I +I+L + F+E+E+ DA
Sbjct: 1 MTEVSSTRLYLGNLPRQATKEDVASHFGAHGTGKITEIKLMN-----GFGFIEYEDMMDA 55
Query: 59 EDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFG 118
D + G F G RL V+ A G R AG G A R
Sbjct: 56 RDVVPAFHGSQFMGERLTVQFARGSRNRDGGGG----------AGNGSGFSGERSAPR-- 103
Query: 119 ISRHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKY 177
R + YR+ + GLP+ SWQDLKD R++ DV ++E R + G G V++ D+
Sbjct: 104 -PRRTPYRMQISGLPNDTSWQDLKDFARQSQLDVVYSETGRSNNGE-GFVEFETAADLAT 161
Query: 178 AIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRS 214
A+ LD EF+ R + P R R RSRS
Sbjct: 162 AVDALDGKEFKEKVVRCVANAQA--DPPVRDRGRSRS 196
>gi|402085269|gb|EJT80167.1| hypothetical protein GGTG_00170 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 318
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 98/217 (45%), Gaps = 24/217 (11%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLF--YKYGRILDIELKIPPRPPCYCFVEFENARDA 58
M+ S +Y+GNLP + +V F + G+I +I+L + F+E+E+ DA
Sbjct: 1 MTEVSSTRLYLGNLPRQATKEDVASHFGAHGTGKITEIKLMN-----GFGFIEYEDMMDA 55
Query: 59 EDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFG 118
D + G F G RL V+ A G R AG G A R
Sbjct: 56 RDVVPAFHGSQFMGERLTVQFARGSRNRDGGGG----------AGNGSGFSGERSAPR-- 103
Query: 119 ISRHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKY 177
R + YR+ + GLP+ SWQDLKD R++ DV ++E R + G G V++ D+
Sbjct: 104 -PRRTPYRMQISGLPNDTSWQDLKDFARQSQLDVVYSETGRSNNGE-GFVEFETAADLAT 161
Query: 178 AIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRS 214
A+ LD EF+ R + P R R RSRS
Sbjct: 162 AVDALDGKEFKEKVVRCVANAQA--DPPVRDRGRSRS 196
>gi|340939264|gb|EGS19886.1| splicing factor srp2-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 307
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 91/213 (42%), Gaps = 32/213 (15%)
Query: 1 MSGRFSRT-IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAE 59
M+ S T +Y+GNLP + +VE F K+G E+KI + F+E+++ DA
Sbjct: 1 MTTEVSSTRLYLGNLPKHATKADVEAHFSKHGTGEITEIKIMN---GFGFIEYKDPMDAR 57
Query: 60 DAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGI 119
D + G F G RL V+ A G R D GYG A
Sbjct: 58 DVVPAFHGSMFMGERLTVQFARGNRHR-----DTANGYGHERAPPRPRRTPHR------- 105
Query: 120 SRHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKYA 178
+ + GLP SWQ AG DV + E SR G+V++ P DM+ A
Sbjct: 106 -------MEITGLPDGCSWQ--------AGVDVVYTETSRRGNSWEGIVEFETPADMRTA 150
Query: 179 IRKLDDTEFRNPWARGRITVKRYDRSPSRSRSR 211
I KLD EF+N RYDR SRS R
Sbjct: 151 IEKLDGREFKNSRTAQPSEPPRYDRGRSRSPIR 183
>gi|393904919|gb|EJD73832.1| hypothetical protein LOAG_18772 [Loa loa]
Length = 199
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP D E+ED F ++GRI + + RPP + FVEFE+ARDAEDA++ DG
Sbjct: 12 VYVGGLPQDATSQELEDAFNRFGRIRKV--WVARRPPGFAFVEFEDARDAEDAVKALDGT 69
Query: 69 NFDGCRLRVELAH 81
G R RVE++H
Sbjct: 70 RICGVRARVEISH 82
>gi|341888855|gb|EGT44790.1| CBN-RSP-2 protein [Caenorhabditis brenneri]
gi|341896980|gb|EGT52915.1| hypothetical protein CAEBREN_32319 [Caenorhabditis brenneri]
Length = 283
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 92/180 (51%), Gaps = 10/180 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G LP+ + +VE F YG+++D+ +K + FV+F++ RDA+DA+ +G
Sbjct: 4 VYIGRLPNRATDRDVEHFFRGYGKLVDVIMK-----NGFGFVDFQDQRDADDAVHDLNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ +E G S GY G G G + R+ + +R++
Sbjct: 59 DLCGERVILEFPRRKVGYNEERSG--SGYRGREPTFRRG-GERQFSNRYSRPCSTRFRLV 115
Query: 129 VRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
+ L + SWQD+KDH+RK G + ++E + + +V ++ +D++ A+ KL E
Sbjct: 116 IDNLSTRFSWQDIKDHIRKLGIEPTYSEAHKRNVNQ-ALVCFSTHDDLREAMNKLQGEEL 174
>gi|240848709|ref|NP_001155652.1| RNA-binding protein-like [Acyrthosiphon pisum]
gi|239788597|dbj|BAH70971.1| ACYPI006120 [Acyrthosiphon pisum]
Length = 135
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 58/94 (61%), Gaps = 9/94 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+GNL S+ +YE+EDLF KYG + +I I PP + F+E+E+ RDAEDA+RG DG
Sbjct: 13 VYIGNLKSNANKYEIEDLFTKYGPLKNIW--IARNPPGFAFIEYEDPRDAEDAVRGLDGT 70
Query: 69 NFDGCRLRVELAHGGSG-------RGPSSSDRRG 95
G R+ V+++ G RG SS RRG
Sbjct: 71 RCCGSRIIVQMSTGKRSRDKSPVHRGRSSPPRRG 104
>gi|440803033|gb|ELR23947.1| hypothetical protein ACA1_075260 [Acanthamoeba castellanii str.
Neff]
Length = 178
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 53/79 (67%), Gaps = 5/79 (6%)
Query: 8 TIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDG 67
+YVG L S RE ++ED F KYGRI+ +++K Y F+E+ ++RDA+DA+RG DG
Sbjct: 7 VVYVGRLSSRTRERDLEDAFSKYGRIIRLDMKAG-----YAFIEYNDSRDADDAVRGMDG 61
Query: 68 YNFDGCRLRVELAHGGSGR 86
+ DG R+ VE +H G GR
Sbjct: 62 NDLDGARISVEPSHRGEGR 80
>gi|268531974|ref|XP_002631115.1| C. briggsae CBR-RSP-1 protein [Caenorhabditis briggsae]
Length = 304
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 89/190 (46%), Gaps = 18/190 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IY+G L S + E ++E F YG+I D+ LK + FVEF++ RDAEDA+ +G
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKN-----GFGFVEFDDKRDAEDAVHDLNGK 59
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGA----------GAGAGAGRFG 118
G R+ ++ + G G GG + +GG G R+G
Sbjct: 60 ELGGDRVILDYSKPRGGGGSGGGYGDRRGGGRVSSYSGGGGRDRFDRYDRGPPRRESRYG 119
Query: 119 ISRHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKY 177
+ +RV+V L S SWQDLKD +R+ G + +AE + ++ + P D+K
Sbjct: 120 RPYSTRHRVLVENLSSRISWQDLKDQVRRQGVEPTYAEAHK--RPNEALLCFATPSDLKR 177
Query: 178 AIRKLDDTEF 187
I K D +
Sbjct: 178 CIDKCDGMDL 187
>gi|358387407|gb|EHK25002.1| hypothetical protein TRIVIDRAFT_145450 [Trichoderma virens Gv29-8]
Length = 311
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 93/189 (49%), Gaps = 28/189 (14%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M+ S +Y+GNLP + +VE F +G E+K+ + F+E+++A DA D
Sbjct: 1 MTEVSSTRLYLGNLPRHATKADVEAHFATHGTGEITEVKLMN---GFGFIEYKDAMDARD 57
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
+ DG +F G RL V+ A G + R GG G
Sbjct: 58 VVP--DGSDFMGERLTVQFARG-------TRHREGGMGH--------------ERAPPRP 94
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKYAI 179
R + +R+ + GLP+ SWQDLKD R++ DV ++E RDS G G V++ D++ A+
Sbjct: 95 RRTPHRMQITGLPNDTSWQDLKDFARQSSLDVVYSETGRDSNGR-GFVEFETAADLRTAV 153
Query: 180 RKLDDTEFR 188
KLD EF+
Sbjct: 154 EKLDGREFK 162
>gi|395854494|ref|XP_003799724.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Otolemur
garnettii]
Length = 179
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 49/71 (69%), Gaps = 3/71 (4%)
Query: 118 GISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKY 177
G S +++ + V LP SWQDLKDH R+AGDVC+A++ +D T VV++ ED+ Y
Sbjct: 45 GPSWNNDCSIFVGNLPPGGSWQDLKDHPREAGDVCYADIYQD---TTSVVEFVQKEDITY 101
Query: 178 AIRKLDDTEFR 188
AI +LD+T+FR
Sbjct: 102 AIEELDNTKFR 112
>gi|389615269|dbj|BAM20617.1| RNA-binding protein [Papilio polytes]
Length = 159
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL ++ +YE+E +F KYG I ++ + PP + FVEFE+ RDAED++RG
Sbjct: 9 LSCKVYVGNLGTNASKYEIEKIFSKYGNIRNV--WVARNPPGFAFVEFEDPRDAEDSVRG 66
Query: 65 RDGYNFDGCRLRVELAHG 82
DG G R+RVE+++G
Sbjct: 67 LDGTRCCGTRIRVEMSNG 84
>gi|312089498|ref|XP_003146269.1| hypothetical protein LOAG_10696 [Loa loa]
Length = 113
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP D E+ED F ++GRI ++ + RPP + FVEFE+ARDAEDA++ DG
Sbjct: 12 VYVGGLPQDATSQELEDAFNRFGRIR--KVWVARRPPGFAFVEFEDARDAEDAVKALDGT 69
Query: 69 NFDGCRLRVELAH 81
G R RVE++H
Sbjct: 70 RICGVRARVEISH 82
>gi|342876767|gb|EGU78325.1| hypothetical protein FOXB_11186 [Fusarium oxysporum Fo5176]
Length = 1835
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 71/143 (49%), Gaps = 22/143 (15%)
Query: 47 YCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAG 106
+ F+E+++ DA D + G +F G RL V+ A G S R GG+G
Sbjct: 1569 FGFIEYKDPMDARDVVPAFHGSDFMGERLTVQFARG-------SRHREGGFGNHERTAPR 1621
Query: 107 GAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYG 165
R + +R+ + GLP+ SWQDLKD R++ DV ++E RDS G G
Sbjct: 1622 -------------PRRTPHRMQITGLPNDTSWQDLKDFARQSSLDVVYSETGRDSNGR-G 1667
Query: 166 VVDYTNPEDMKYAIRKLDDTEFR 188
V++ D++ A+ KLD EF+
Sbjct: 1668 FVEFETAADLRTAVEKLDGREFK 1690
>gi|325087601|gb|EGC40911.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 316
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 32/175 (18%)
Query: 18 IREYEVEDLFYKY---GRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDGCR 74
+ + E+ED F + G+I +I+L + F+E+E+A DA+D + G +F G R
Sbjct: 32 VTKQEIEDHFNSHHGSGKITEIKLMS-----GFGFIEYEDAMDAKDVVPAFHGTDFKGER 86
Query: 75 LRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVIVRGLPS 134
L V+ A RGP + G + A R R + YR+ + GLP
Sbjct: 87 LTVQFA-----RGPRHKE-----------TFSGPSDRSSAPR---PRRTIYRMQISGLPE 127
Query: 135 SASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
+ SWQDLKD R++G DV ++E D G V++ D+K A+ KLD EF+
Sbjct: 128 T-SWQDLKDFARQSGLDVVYSETGHDGRG---FVEFETGSDLKTAVEKLDGREFK 178
>gi|268531976|ref|XP_002631116.1| C. briggsae CBR-RSP-2 protein [Caenorhabditis briggsae]
Length = 279
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 91/180 (50%), Gaps = 10/180 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G LP+ + +VE F YG++ D+ +K + FV+F+ RDA+DA+ +G
Sbjct: 4 VYIGRLPNRATDRDVEHFFRGYGKLSDVIMK-----NGFGFVDFQEQRDADDAVHDLNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ +E G + +R GG G G + R+ + +R++
Sbjct: 59 DLCGERVILEFPRRKVG---YNEERSGGGFRGREPTFRRGGERQFSNRYSRPCSTRFRLV 115
Query: 129 VRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
+ L + SWQD+KDH+RK G + ++E + + +V ++ +D++ A+ KL E
Sbjct: 116 IDNLSTRYSWQDIKDHIRKLGIEPTYSEAHKRNVNQ-ALVCFSTHDDLRDAMNKLQGEEL 174
>gi|68058719|ref|XP_671328.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56487404|emb|CAI03297.1| hypothetical protein PB301122.00.0 [Plasmodium berghei]
Length = 96
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 50/79 (63%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLPS + +VE+ F K+G IL ++K + F+EFE+ARDA DAI+ +DG
Sbjct: 10 IYVGNLPSHVTSRDVENEFRKFGTILKCDVKKTVSGAAFAFIEFEDARDAADAIKEKDGC 69
Query: 69 NFDGCRLRVELAHGGSGRG 87
+F G +LRVE+ G
Sbjct: 70 DFGGNKLRVEVPFNARANG 88
>gi|222137598|gb|ACM45326.1| rbp1-like RNA-binding protein PC [Bombyx mori]
Length = 91
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL ++ +YE+E +F KYG I ++ + PP + FVEFE+ RDAED++RG
Sbjct: 9 LSCKVYVGNLGTNASKYEIEKIFSKYGNIRNV--WVARNPPGFAFVEFEDPRDAEDSVRG 66
Query: 65 RDGYNFDGCRLRVELAHG 82
DG G R+RVE+++G
Sbjct: 67 LDGTRCCGTRIRVEMSNG 84
>gi|222137596|gb|ACM45325.1| rbp1-like RNA-binding protein PB [Bombyx mori]
Length = 159
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL ++ +YE+E +F KYG I ++ + PP + FVEFE+ RDAED++RG
Sbjct: 9 LSCKVYVGNLGTNASKYEIEKIFSKYGNIRNV--WVARNPPGFAFVEFEDPRDAEDSVRG 66
Query: 65 RDGYNFDGCRLRVELAHG 82
DG G R+RVE+++G
Sbjct: 67 LDGTRCCGTRIRVEMSNG 84
>gi|393904918|gb|EJD73831.1| hypothetical protein, variant [Loa loa]
Length = 145
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP D E+ED F ++GRI + + RPP + FVEFE+ARDAEDA++ DG
Sbjct: 12 VYVGGLPQDATSQELEDAFNRFGRIRKV--WVARRPPGFAFVEFEDARDAEDAVKALDGT 69
Query: 69 NFDGCRLRVELAH 81
G R RVE++H
Sbjct: 70 RICGVRARVEISH 82
>gi|17535713|ref|NP_496441.1| Protein RSP-2 [Caenorhabditis elegans]
gi|56749459|sp|Q23120.1|RSP2_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 2;
AltName: Full=CeSRp40; AltName: Full=RNA-binding protein
srp-4
gi|3880428|emb|CAA91394.1| Protein RSP-2 [Caenorhabditis elegans]
Length = 281
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 90/175 (51%), Gaps = 10/175 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G LP+ + +VE F YG++ D+ +K + FV+F++ RDA+DA+ +G
Sbjct: 4 VYIGRLPNRASDRDVEHFFRGYGKLSDVIMK-----NGFGFVDFQDQRDADDAVHDLNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ +E G + +R G G G + R+ + +R++
Sbjct: 59 ELCGERVILEFPRRKVG---YNEERSGSGFRGREPTFRKGGERQFSNRYSRPCSTRFRLV 115
Query: 129 VRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKL 182
+ L + SWQD+KDH+RK G + ++E + + +V +T+ +D++ A+ KL
Sbjct: 116 IDNLSTRYSWQDIKDHIRKLGIEPTYSEAHKRNVNQ-AIVCFTSHDDLRDAMNKL 169
>gi|222137600|gb|ACM45327.1| rbp1-like RNA-binding protein PD [Bombyx mori]
Length = 117
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL ++ +YE+E +F KYG I ++ + PP + FVEFE+ RDAED++RG
Sbjct: 9 LSCKVYVGNLGTNASKYEIEKIFSKYGNIRNV--WVARNPPGFAFVEFEDPRDAEDSVRG 66
Query: 65 RDGYNFDGCRLRVELAHG 82
DG G R+RVE+++G
Sbjct: 67 LDGTRCCGTRIRVEMSNG 84
>gi|313227227|emb|CBY22374.1| unnamed protein product [Oikopleura dioica]
Length = 263
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 87/197 (44%), Gaps = 33/197 (16%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G LP+ R +VE+ F +G I I LK P Y FV FE+ RDAE+A R DG
Sbjct: 8 LYIGYLPNQARMSDVEEFFKGFGHIKSINLK-----PGYGFVVFEDKRDAEEAARDLDGK 62
Query: 69 NFDGCRLRVELAHGG----------SGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFG 118
G ++ VE+A G SG P D R G+ G + G +
Sbjct: 63 RMCGEKVDVEMAKGPGNKSRKEYSRSGDRPIVRDTRSGFNGRRRSRSRDRGFSS------ 116
Query: 119 ISRHSEYR----VIVRGLPSSASWQDLKDHMRKAG----DVCFAEVSRDSEGTYGVVDYT 170
+ YR + + L + SWQDLKD +R D C A D T V +
Sbjct: 117 -RKKEPYRDDATISITNLSTRCSWQDLKDFIRDNARVEPDFCDAHKYEDRIAT---VSFR 172
Query: 171 NPEDMKYAIRKLDDTEF 187
+ DM+ A+ ++D E
Sbjct: 173 SSSDMRKAVDRMDGFEI 189
>gi|212526968|ref|XP_002143641.1| pre-RNA splicing factor Srp2, putative [Talaromyces marneffei ATCC
18224]
gi|210073039|gb|EEA27126.1| pre-RNA splicing factor Srp2, putative [Talaromyces marneffei ATCC
18224]
Length = 261
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 85/175 (48%), Gaps = 28/175 (16%)
Query: 47 YCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAG 106
+ F+E+E+A DA D + DG +F G RL V+ A RGP +
Sbjct: 4 FGFIEYEDAMDARDVVP--DGSDFKGERLTVQFA-----RGPRHKE-----------TFN 45
Query: 107 GAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYG 165
G A R R + +R+ V GLP+ SWQDLKD R++G DV ++E +R+ +G G
Sbjct: 46 GPSDRPSAPR---PRRTVFRMQVSGLPTETSWQDLKDFARQSGLDVVYSETTRERDGR-G 101
Query: 166 VVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRS 220
V++ + D+K A+ KLD E +G D P+ R R RSRS
Sbjct: 102 FVEFESHADLKTAVEKLDGREL-----KGSQVTCVADVQPAEERPPYRDPYRSRS 151
>gi|453083473|gb|EMF11519.1| hypothetical protein SEPMUDRAFT_150428 [Mycosphaerella populorum
SO2202]
Length = 359
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 98/199 (49%), Gaps = 32/199 (16%)
Query: 22 EVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDGCRLRVEL 79
+VE+ F +G I +I+L + F+E+++A DA D + G F G RL V+
Sbjct: 50 DVENHFNTHGTGEITEIKLMN-----GFGFIEYKDAMDARDVVPAFHGSEFMGERLVVQF 104
Query: 80 AHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQ 139
A G S+ R G+ A R R + +R+ + GLP SWQ
Sbjct: 105 ARG-------STRPREGF----------EHQPRMAPR---PRRTVHRMTITGLPFETSWQ 144
Query: 140 DLKDHMRKAG-DVCFAEVS--RDSEGT-YGVVDYTNPEDMKYAIRKLDDTEFRNPWARGR 195
DLKD R++G DV ++EV+ RD GT G V+Y D+ A+ KLD++EF+ R
Sbjct: 145 DLKDFARQSGLDVVYSEVNRERDPAGTGKGFVEYETAADLASAVEKLDNSEFKGATVRC- 203
Query: 196 ITVKRYDRSPSRSRSRSRS 214
I+ + D R R RSRS
Sbjct: 204 ISDPQADVPRPRERFRSRS 222
>gi|324532579|gb|ADY49247.1| Splicing factor, arginine/serine-rich 6, partial [Ascaris suum]
Length = 156
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP D EVED F +YGRI + + RPP + FVEFE++RDAED+++ DG
Sbjct: 12 VYVGGLPQDATSQEVEDAFSRYGRIRKVW--VARRPPGFAFVEFEDSRDAEDSVKALDGT 69
Query: 69 NFDGCRLRVELAH 81
G R RVEL+H
Sbjct: 70 RICGVRARVELSH 82
>gi|389640647|ref|XP_003717956.1| hypothetical protein MGG_11457 [Magnaporthe oryzae 70-15]
gi|351640509|gb|EHA48372.1| hypothetical protein MGG_11457 [Magnaporthe oryzae 70-15]
Length = 331
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 104/210 (49%), Gaps = 19/210 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKY--GRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP + +V F + G+I +I+L + F+E+++ DA D +
Sbjct: 9 LYLGNLPRSATKEDVSTHFSSHGTGKITEIKLMN-----GFGFIEYDDPLDARDVVPAFH 63
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGI-SRHSEY 125
G F G RL V+ A G R S GG GG GG G G G R G R + +
Sbjct: 64 GSTFMGERLTVQFARGTRNREGGSG--------GGGGGGGGGGGGYGGERSGPRPRRTAF 115
Query: 126 RVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDD 184
R+ + GLP SWQDLKD R++ DV ++E R++ G G V++ D+ A+ LD
Sbjct: 116 RMQISGLPVDTSWQDLKDFARQSQLDVVYSETGRNNNGE-GFVEFETAADLASAVEALDG 174
Query: 185 TEFRNPWARGRITVKRYDRSPSRSRSRSRS 214
EF++ R + + D P R RSRS
Sbjct: 175 KEFKDKIVRC-VANTQPDPPPRDGRGRSRS 203
>gi|389609451|dbj|BAM18337.1| RNA-binding protein 1 [Papilio xuthus]
Length = 141
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL ++ +YE+E +F KYG I ++ + PP + FVEFE+ RDAED++RG
Sbjct: 9 LSCKVYVGNLGTNASKYEIEKIFSKYGNIRNV--WVARNPPGFAFVEFEDPRDAEDSVRG 66
Query: 65 RDGYNFDGCRLRVELAHG 82
DG G R+RVE+++G
Sbjct: 67 LDGTRCCGTRIRVEMSNG 84
>gi|115361548|gb|ABI95863.1| RNA-binding protein [Bombyx mori]
Length = 142
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL ++ +YE+E +F KYG I ++ + PP + FVEFE+ RDAED++RG
Sbjct: 9 LSCKVYVGNLGTNASKYEIEKIFSKYGNIRNV--WVARNPPGFAFVEFEDPRDAEDSVRG 66
Query: 65 RDGYNFDGCRLRVELAHG 82
DG G R+RVE+++G
Sbjct: 67 LDGTRCCGTRIRVEMSNG 84
>gi|210075657|ref|XP_502448.2| YALI0D05547p [Yarrowia lipolytica]
gi|199425767|emb|CAG80636.2| YALI0D05547p [Yarrowia lipolytica CLIB122]
Length = 339
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 90/198 (45%), Gaps = 28/198 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++ + D + ++EDLF +G I +++L Y F+EF++ DA A DG
Sbjct: 16 LFLRPIGPDTNKEQIEDLFSSHGPIKEVKLI-----KNYGFIEFDSLDDAIRAKDNVDGQ 70
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+G L A+ R P + R G G + +RV
Sbjct: 71 PLNGEPLFCTYANPIKVREPRTYRDRNDRNDRG----------------GDRKEDIFRVN 114
Query: 129 VRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
+ GL SWQDLKD R A DV + VSRD EG G V++ + + M+ A+ KLD TEF
Sbjct: 115 ISGLAPGVSWQDLKDFGRTADVDVTYTNVSRDREGE-GTVEFRSADQMEQAVSKLDGTEF 173
Query: 188 RNPWARGRITVKRYDRSP 205
+G I + D +P
Sbjct: 174 -----KGEIVTLKIDPNP 186
>gi|410953846|ref|XP_003983581.1| PREDICTED: serine/arginine-rich splicing factor 6 [Felis catus]
Length = 318
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 86/179 (48%), Gaps = 37/179 (20%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+I+LK + + GR
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK--------------------NGVPGRRCL 43
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ +LR A G G S RR +G ++G +E+R+I
Sbjct: 44 HACPGQLRDAGARGLGCGGGGYSSRR----------------TSGRDKYGPPVRTEFRLI 87
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MR+AG+V +A+ ++ GV+++ + DMK A+ KLD TE
Sbjct: 88 VENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNE-GVIEFRSYSDMKRALDKLDGTEI 145
>gi|324512982|gb|ADY45358.1| Splicing factor, arginine/serine-rich 6 [Ascaris suum]
Length = 142
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP D E+ED F ++GRI + + RPP + FVEFE++RDAED+++ DG
Sbjct: 12 VYVGGLPQDATSQEIEDAFNRFGRIRKVWVAR--RPPGFAFVEFEDSRDAEDSVKALDGT 69
Query: 69 NFDGCRLRVELAH 81
G R RVEL+H
Sbjct: 70 RICGVRARVELSH 82
>gi|170595883|ref|XP_001902557.1| Sr protein [Brugia malayi]
gi|158589706|gb|EDP28594.1| Sr protein, putative [Brugia malayi]
Length = 153
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP D E+ED F ++GRI ++ + RPP + FVEFE+ARDAEDA++ DG
Sbjct: 21 VYVGGLPQDATSQELEDAFNRFGRIR--KVWVARRPPGFAFVEFEDARDAEDAVKALDGT 78
Query: 69 NFDGCRLRVELAH 81
G R RVE++H
Sbjct: 79 RICGVRARVEISH 91
>gi|225556594|gb|EEH04882.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 314
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 88/175 (50%), Gaps = 34/175 (19%)
Query: 18 IREYEVEDLFYKY---GRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDGCR 74
+ + E+ED F + G+I +I+L + F+E+E+A DA+D + DG +F G R
Sbjct: 32 VTKQEIEDHFNSHHGSGKITEIKLMS-----GFGFIEYEDAMDAKDVVP--DGTDFKGER 84
Query: 75 LRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVIVRGLPS 134
L V+ A RGP + G + A R R + YR+ + GLP
Sbjct: 85 LTVQFA-----RGPRHKE-----------TFSGPSDRSSAPR---PRRTIYRMQISGLPE 125
Query: 135 SASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFR 188
+ SWQDLKD R++G DV ++E D G V++ D+K A+ KLD EF+
Sbjct: 126 T-SWQDLKDFARQSGLDVVYSETGHDGRG---FVEFETGSDLKTAVEKLDGREFK 176
>gi|242012605|ref|XP_002427020.1| arginine/serine-rich splicing factor, putative [Pediculus humanus
corporis]
gi|212511265|gb|EEB14282.1| arginine/serine-rich splicing factor, putative [Pediculus humanus
corporis]
Length = 403
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Query: 111 GAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYT 170
G G+ R+G +EYR+IV L S SWQDLKD+MR+AG+V +A+ ++ G+V+++
Sbjct: 174 GRGSDRYGPPTRTEYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKNRRNE-GIVEFS 232
Query: 171 NPEDMKYAIRKLDDTEF 187
+ D+K AI KLD TE
Sbjct: 233 SSSDLKAAIDKLDGTEL 249
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 9/85 (10%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G LP +++ ++E F YGRI DI +K Y FVEF++ RDA+DA+ +G
Sbjct: 6 VYIGGLPYGVKDRDIERFFKGYGRIRDILIK-----NGYGFVEFDDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDR 93
+ G R+ VE A G P SDR
Sbjct: 61 DLLGERVSVERARG----TPRGSDR 81
>gi|393904920|gb|EFO17802.2| hypothetical protein LOAG_10698 [Loa loa]
Length = 133
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VG LP+D E+E+ F KYGRI + L RPP + FVEFE++RDAEDA++G DG
Sbjct: 12 VFVGGLPNDASSEELEEAFSKYGRIKKVWLA--RRPPGFAFVEFEDSRDAEDAVKGLDGT 69
Query: 69 NFDGCRLRVELAH 81
G R RVE +H
Sbjct: 70 RICGVRPRVEFSH 82
>gi|167536851|ref|XP_001750096.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771425|gb|EDQ85092.1| predicted protein [Monosiga brevicollis MX1]
Length = 136
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 54/76 (71%), Gaps = 2/76 (2%)
Query: 6 SRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGR 65
SR ++VGNLP DI + ++E+ F ++GR+LD+ + +PP + FV+FE+ RDAEDA++G
Sbjct: 45 SRQVFVGNLPDDIEKMDLENEFRQFGRLLDV--WVARKPPGFAFVKFEDQRDAEDAVQGL 102
Query: 66 DGYNFDGCRLRVELAH 81
+ G +RVE++H
Sbjct: 103 NRRTAFGREIRVEISH 118
>gi|324506217|gb|ADY42661.1| Splicing factor, arginine/serine-rich 6 [Ascaris suum]
Length = 163
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP D E+ED F ++GRI + + RPP + FVEFE++RDAED+++ DG
Sbjct: 12 VYVGGLPQDATSQEIEDAFNRFGRIRKVW--VARRPPGFAFVEFEDSRDAEDSVKALDGT 69
Query: 69 NFDGCRLRVELAH 81
G R RVEL+H
Sbjct: 70 RICGVRARVELSH 82
>gi|389640645|ref|XP_003717955.1| hypothetical protein, variant [Magnaporthe oryzae 70-15]
gi|351640508|gb|EHA48371.1| hypothetical protein, variant [Magnaporthe oryzae 70-15]
Length = 330
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 105/210 (50%), Gaps = 21/210 (10%)
Query: 9 IYVGNLPSDIREYEVEDLFYKY--GRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP + +V F + G+I +I+L + F+E+++ DA D + D
Sbjct: 9 LYLGNLPRSATKEDVSTHFSSHGTGKITEIKLMN-----GFGFIEYDDPLDARDVV--PD 61
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGI-SRHSEY 125
G F G RL V+ A G R S GG GG GG G G G R G R + +
Sbjct: 62 GSTFMGERLTVQFARGTRNREGGSG--------GGGGGGGGGGGGYGGERSGPRPRRTAF 113
Query: 126 RVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDD 184
R+ + GLP SWQDLKD R++ DV ++E R++ G G V++ D+ A+ LD
Sbjct: 114 RMQISGLPVDTSWQDLKDFARQSQLDVVYSETGRNNNGE-GFVEFETAADLASAVEALDG 172
Query: 185 TEFRNPWARGRITVKRYDRSPSRSRSRSRS 214
EF++ R + + D P R RSRS
Sbjct: 173 KEFKDKIVRC-VANTQPDPPPRDGRGRSRS 201
>gi|449273171|gb|EMC82779.1| Splicing factor, arginine/serine-rich 4, partial [Columba livia]
Length = 417
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 81/139 (58%), Gaps = 12/139 (8%)
Query: 49 FVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGA 108
FVEF++ RDA+DA+ +G + G R+ VE A RGP RR G G G G
Sbjct: 1 FVEFDDVRDADDAVYELNGKDLCGERVIVEHA-----RGP----RRDSSYGSGRSGYGYR 51
Query: 109 GAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVD 168
+G ++G +EYR+IV L S SWQDLKD+MR+AG+V +A+ + + GV++
Sbjct: 52 RSGRD--KYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRK-NEGVIE 108
Query: 169 YTNPEDMKYAIRKLDDTEF 187
+ + DMK A+ KLD TE
Sbjct: 109 FKSYSDMKRALEKLDGTEV 127
>gi|357623469|gb|EHJ74606.1| rbp1-like RNA-binding protein PB [Danaus plexippus]
Length = 156
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL ++ +YE+E +F KYG I ++ + PP + FVE+E+ RDAED++RG
Sbjct: 9 LSCKVYVGNLGTNASKYEIEKVFSKYGSIRNVW--VARNPPGFAFVEYEDPRDAEDSVRG 66
Query: 65 RDGYNFDGCRLRVELAHG 82
DG G R+RVE+++G
Sbjct: 67 LDGTRCCGTRIRVEMSNG 84
>gi|339246347|ref|XP_003374807.1| splicing factor, arginine/serine-rich 6 [Trichinella spiralis]
gi|316971934|gb|EFV55647.1| splicing factor, arginine/serine-rich 6 [Trichinella spiralis]
Length = 305
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 71/146 (48%), Gaps = 12/146 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G LP RE +VED F YGRI +I LK + FVEF++ RDA+DA+ +G
Sbjct: 92 VYIGRLPYRARERDVEDFFKGYGRIREILLKNG-----FGFVEFDDPRDADDAVYHLNGR 146
Query: 69 NFDGCRLRVELAH-GGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRV 127
G R+ VE+ GR S RG YG G + ++G + +R
Sbjct: 147 ELCGERIIVEMTKRPPKGRDAFRSSYRGSYGSRGF--SPERRRRDRDDKYGPPSQTPWRC 204
Query: 128 IVRGLPSSASWQDLKDHMRKAGDVCF 153
IV + + SWQ H+R A CF
Sbjct: 205 IVSNVSTRVSWQ----HLRMAQAKCF 226
>gi|170596504|ref|XP_001902788.1| RNA-binding protein. [Brugia malayi]
gi|158589316|gb|EDP28363.1| RNA-binding protein., putative [Brugia malayi]
Length = 130
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VG LP+D E+E+ F KYGRI + L RPP + F+EFE++RDAEDA++G DG
Sbjct: 12 VFVGGLPNDASSEELEEAFSKYGRIKKVWLA--RRPPGFAFIEFEDSRDAEDAVKGLDGT 69
Query: 69 NFDGCRLRVELAH 81
G R RVE +H
Sbjct: 70 RICGVRPRVEFSH 82
>gi|313232321|emb|CBY09430.1| unnamed protein product [Oikopleura dioica]
Length = 344
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 18/192 (9%)
Query: 8 TIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDG 67
T+++G+LP I+ V+D F +YG + I L + F++F +DA++A++ DG
Sbjct: 8 TVWMGDLPPGIKRGHVKDFFEEYGPLGGIRLM-----NNFGFIDFRKKKDAKEAVKELDG 62
Query: 68 YNFDGCRLRVELAHGGSGRGPSSSDRRG-GYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G R+R+E + G P S ++G Y GG + + ++Y
Sbjct: 63 KKLKGARIRLEHSDG-----PGGSKKKGEDYDAVNFPPIGGQSS-----MYERPYRTKYT 112
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVS-RDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
+ V L + SW DLK+ MR+AG+V + + R EG G V + + + + A++KL+ T
Sbjct: 113 ISVSNLSTRFSWADLKNFMRRAGEVTYTDAHVRSGEGN-GEVCFKDRKGLYRAMQKLNST 171
Query: 186 EFRNPWARGRIT 197
R RI
Sbjct: 172 RLGGKKIRLRIV 183
>gi|55824572|gb|AAV66406.1| splicing factor arginine/serine-rich protein 5 [Macaca
fascicularis]
Length = 208
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 76/164 (46%), Gaps = 37/164 (22%)
Query: 30 YGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPS 89
YGRI DI+LK + FVEFE+ RDA+DA+ DG C RV + H +
Sbjct: 3 YGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGKEL--CSERVTIEHARARSRGG 55
Query: 90 SSDRRGGYGGGGAGGAGGAGAGAGAGRFGISR-----------HSEYRVIVRGLPSSASW 138
G + RF R +E R+IV L S SW
Sbjct: 56 RG------------------RGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSW 97
Query: 139 QDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKL 182
QDLKD MR+AG+V FA+ R + GVV++ + D+K AI KL
Sbjct: 98 QDLKDFMRQAGEVTFADAHR-PKLNEGVVEFASYGDLKNAIEKL 140
>gi|281345554|gb|EFB21138.1| hypothetical protein PANDA_005614 [Ailuropoda melanoleuca]
Length = 319
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 84/179 (46%), Gaps = 36/179 (20%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+I+LK E RG
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-------------NGHGTPERXXRGL--- 47
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
GC + + G G S RR +G ++G +E+R+I
Sbjct: 48 ---GCGVCLARVGVFGGGGGGYSSRR----------------TSGRDKYGPPVRTEFRLI 88
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V L S SWQDLKD MR+AG+V +A+ ++ GV+++ + DMK A+ KLD TE
Sbjct: 89 VENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNE-GVIEFRSYSDMKRALDKLDGTEI 146
>gi|327284522|ref|XP_003226986.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Anolis
carolinensis]
Length = 195
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 18/178 (10%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G+L + + +E F YG+I++++LK Y F+EF + DA+DA+ +G
Sbjct: 4 VYIGHLSNQAHKRNMEP-FKGYGKIVEVDLKNG-----YGFLEFGDVCDADDAVHELNGK 57
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G + VE GP +G +G +G + G H+EYR+I
Sbjct: 58 DLCGDHVIVE-----HTWGPRCDSSYS------SGRSGYGYRRSGRDKNGPPTHTEYRLI 106
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTE 186
L +WQDLKD+M +AG+V +A+ + + GV+++ + DMK A+ LD TE
Sbjct: 107 DENLTGCCNWQDLKDYMHQAGEVTYAD-AHNGRKNEGVIEFKSYSDMKRALENLDGTE 163
>gi|402591119|gb|EJW85049.1| hypothetical protein WUBG_04043 [Wuchereria bancrofti]
Length = 129
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP D E+ED F ++GRI + + RPP + FVEFE+ARDAEDA++ DG
Sbjct: 12 VYVGGLPQDATSQELEDAFNRFGRIRKV--WVARRPPGFAFVEFEDARDAEDAVKALDGT 69
Query: 69 NFDGCRLRVELAH 81
G R RVE++H
Sbjct: 70 RICGVRARVEISH 82
>gi|82595824|ref|XP_726007.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23481235|gb|EAA17572.1| similar to splicing factor, arginine/serine-rich 4, putative
[Plasmodium yoelii yoelii]
Length = 715
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 86/187 (45%), Gaps = 13/187 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
I+VGN+ D RE EV F KYG I++I+ K + F+E+ AE+AI G +G
Sbjct: 263 IFVGNISPDAREEEVRKKFSKYGDIINIQWK-----RRFAFIEYSKPVYAENAISGENGK 317
Query: 69 NFDGCRLRVELAH---GGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRF-GISRHSE 124
++ G L V+ H + S + Y +F I + +
Sbjct: 318 HYMGEELSVQAHHLSPFKNNYNNSYGNVYNNYRNDPRNYENKYSRNYSDNKFESIEKKNS 377
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAG----DVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
R++V+ + SWQDLKD R+ G + +++ YG+++Y N E MK AI
Sbjct: 378 LRIVVKNIDEKVSWQDLKDFGREVGLVNYANVVYNNNGNNKEYYGIIEYYNYETMKRAID 437
Query: 181 KLDDTEF 187
L+ +F
Sbjct: 438 VLNGKKF 444
>gi|312089500|ref|XP_003146270.1| hypothetical protein LOAG_10698 [Loa loa]
Length = 111
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VG LP+D E+E+ F KYGRI + L RPP + FVEFE++RDAEDA++G DG
Sbjct: 12 VFVGGLPNDASSEELEEAFSKYGRIKKVWLAR--RPPGFAFVEFEDSRDAEDAVKGLDGT 69
Query: 69 NFDGCRLRVELAH 81
G R RVE +H
Sbjct: 70 RICGVRPRVEFSH 82
>gi|225712010|gb|ACO11851.1| RNA-binding protein 1 [Lepeophtheirus salmonis]
Length = 152
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +Y+GNL + +YE+ED F KYG + ++ + PP + FVEFE+ RDAED++RG
Sbjct: 9 ISCKVYIGNLGNSASKYELEDAFSKYGPLKNV--WVARNPPGFAFVEFEDPRDAEDSVRG 66
Query: 65 RDGYNFDGCRLRVELAHGGS 84
DG G R+RVE++ G S
Sbjct: 67 LDGTRVCGQRVRVEMSSGQS 86
>gi|226472962|emb|CAX71167.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
Length = 161
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 44/52 (84%), Gaps = 3/52 (5%)
Query: 138 WQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFRN 189
WQDLKDHMR+AGDV +A+V RD GT GVV++ EDMKYAIR+LDD++FR+
Sbjct: 68 WQDLKDHMREAGDVGYADVFRD--GT-GVVEFLRYEDMKYAIRRLDDSKFRS 116
>gi|290561220|gb|ADD38012.1| RNA-binding protein 1 [Lepeophtheirus salmonis]
Length = 152
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +Y+GNL + +YE+ED F KYG + ++ + PP + FVEFE+ RDAED++RG
Sbjct: 9 ISCKVYIGNLGNSASKYELEDAFSKYGPLKNV--WVARNPPGFAFVEFEDPRDAEDSVRG 66
Query: 65 RDGYNFDGCRLRVELAHGGS 84
DG G R+RVE++ G S
Sbjct: 67 LDGTRVCGQRVRVEMSSGQS 86
>gi|341903887|gb|EGT59822.1| CBN-RSP-6 protein [Caenorhabditis brenneri]
Length = 248
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LPSD E+E++F ++GRI + + RPP + FVE+++ RDAEDA+R DG
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKV--WVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 69 NFDGCRLRVELAHG 82
G R RVEL+ G
Sbjct: 63 RICGVRARVELSTG 76
>gi|146323402|ref|XP_754610.2| pre-RNA splicing factor Srp2 [Aspergillus fumigatus Af293]
gi|129558308|gb|EAL92572.2| pre-RNA splicing factor Srp2, putative [Aspergillus fumigatus
Af293]
gi|159127623|gb|EDP52738.1| pre-RNA splicing factor Srp2, putative [Aspergillus fumigatus
A1163]
Length = 272
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 102/221 (46%), Gaps = 31/221 (14%)
Query: 31 GRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSS 90
G+I +I+L + F+E+E+A DA D + DG +F G RL V+ A RGP
Sbjct: 8 GKITEIKLMN-----GFGFIEYEDAMDARDVVP--DGSDFKGERLTVQFA-----RGPRR 55
Query: 91 SDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAG- 149
+ G R R + +R++V GLP + SWQDLKD R++G
Sbjct: 56 KE-----------NFPGPPDRPNMPR---PRRTIFRMLVSGLPET-SWQDLKDFARQSGL 100
Query: 150 DVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSR 209
DV ++E R E G V++ D+K AI KLD EF+ ++ +D R
Sbjct: 101 DVVYSETGR--EQGRGFVEFETAADLKTAIDKLDGREFKGSRVSCVADIQPHDDRIFRDP 158
Query: 210 SRSRSRSRSRSRIVRRNRSKSLERSVS-RSVSRSMSASPVK 249
RSRS RS I +R R S R+ R S P++
Sbjct: 159 YRSRSPRRSYPPIDEYDRRFPAPRGYSPRAHYRERSPVPLR 199
>gi|389582698|dbj|GAB65435.1| pre-mRNA splicing factor, partial [Plasmodium cynomolgi strain B]
Length = 450
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKL 182
+E+R+I+ LP S WQ LKD MR+ GDV +A + R GVV++ N +DM YAI K
Sbjct: 17 TEHRIIISNLPESCKWQHLKDAMRQCGDVGYANIER----GKGVVEFINRDDMLYAIEKF 72
Query: 183 DDTEFR 188
D +EF+
Sbjct: 73 DGSEFK 78
>gi|171682128|ref|XP_001906007.1| hypothetical protein [Podospora anserina S mat+]
gi|170941023|emb|CAP66673.1| unnamed protein product [Podospora anserina S mat+]
Length = 319
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 93/183 (50%), Gaps = 22/183 (12%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGR--ILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP + + ++E F +G I +I+L + F+E+++ DA D + D
Sbjct: 9 LYLGNLPRNATKADIEAHFSTHGTGDIAEIKLMN-----GFGFIEYKDPMDARDVVP--D 61
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G F G RL V+ A G R + GG GG G + A R R + +R
Sbjct: 62 GSTFLGERLTVQFARGNRHRENNGG--------GGGGGGGFNNDRSSAPR---PRRTPHR 110
Query: 127 VIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDT 185
+ + GLP SWQDLKD R G DV ++E R+ + G V++ D++ A+ KL++
Sbjct: 111 LQISGLPPDTSWQDLKDFARTPGLDVVYSETGRNG-SSEGFVEFETAADLRTAVEKLNER 169
Query: 186 EFR 188
+F+
Sbjct: 170 DFK 172
>gi|17535711|ref|NP_496442.1| Protein RSP-1, isoform a [Caenorhabditis elegans]
gi|56749460|sp|Q23121.1|RSP1_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 1;
AltName: Full=CeSRp75; AltName: Full=RNA-binding protein
srp-5
gi|3880429|emb|CAA91395.1| Protein RSP-1, isoform a [Caenorhabditis elegans]
Length = 312
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 88/193 (45%), Gaps = 21/193 (10%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IY+G L S + E ++E F YG+I D+ LK + FVEF++ RDAEDA+ +G
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKN-----GFGFVEFDDKRDAEDAVHDLNGK 59
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGA-------------GAGAGAG 115
G R+ ++ + G G GG GG G G
Sbjct: 60 ELGGERVILDYSKPRGGGGDRGGFGGGGRGGARVSSYSGGGGGGRDRFDRYDRGPPRRES 119
Query: 116 RFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPED 174
R+G + +RV+V L S SWQDLKD +R+ G + +AE + ++ + P D
Sbjct: 120 RYGRPYSTRHRVVVENLSSRISWQDLKDQVRRQGVEPTYAEAHK--RPNEALLCFATPSD 177
Query: 175 MKYAIRKLDDTEF 187
+K I K D +
Sbjct: 178 LKRCIEKCDGMDL 190
>gi|225710746|gb|ACO11219.1| RNA-binding protein 1 [Caligus rogercresseyi]
Length = 152
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +Y+GNL + +YE+ED F KYG + ++ + PP + FVEFE+ RDAED++RG
Sbjct: 9 ISCKVYIGNLGNSASKYELEDAFSKYGPLKNV--WVARNPPGFAFVEFEDPRDAEDSVRG 66
Query: 65 RDGYNFDGCRLRVELAHGGS 84
DG G R+RVE++ G S
Sbjct: 67 LDGTRVCGQRVRVEMSSGQS 86
>gi|406862976|gb|EKD16025.1| pre-mRNA splicing factor [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 326
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 99/216 (45%), Gaps = 45/216 (20%)
Query: 15 PSDIR---EYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGR---- 65
P+D+R + +VE F +G I +I+L + F+E+++A DA D + G
Sbjct: 25 PADLRTATKADVEAHFNTHGTGEITEIKLMN-----GFGFIEYKDAMDARDVVPGMTAQQ 79
Query: 66 ----DGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISR 121
G +F G RL V+ A G R ++ R A R R
Sbjct: 80 LQAFHGSDFMGERLTVQFARGTRNRDTFAASERT------------------APR---PR 118
Query: 122 HSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKYAIR 180
+ +R+ + GLP SWQDLKD R++ DV ++E RD +G V++ D+K A+
Sbjct: 119 RTPHRMQISGLPGETSWQDLKDFARQSSLDVVYSETGRDRDGKGSFVEFETALDLKTAVE 178
Query: 181 KLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRS 216
KLD EF+ R+T D P R R RSRS
Sbjct: 179 KLDGREFKG----VRVTCIA-DTQPDIPRDRGRSRS 209
>gi|195451607|ref|XP_002072997.1| GK13897 [Drosophila willistoni]
gi|194169082|gb|EDW83983.1| GK13897 [Drosophila willistoni]
Length = 140
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL S +YE+E+ F KYG + ++ + PP + FVEFE+ RDAEDA R DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLKNV--WVARNPPGFAFVEFEDRRDAEDATRALDGT 70
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAG 106
G R+RVE++ G S + G G GGAG
Sbjct: 71 RCCGTRIRVEMSSGRSRERSRRGGGQSGEAGSNRGGAG 108
>gi|449017556|dbj|BAM80958.1| similar to Gbp1p protein [Cyanidioschyzon merolae strain 10D]
Length = 293
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEG---TYGVVDYTNPEDMKYAIRKL 182
RV V L S SWQ LKDHMRKAG+V FAEV + +G GVV+Y D AI L
Sbjct: 95 RVYVGNLAWSVSWQALKDHMRKAGEVVFAEVFTERDGRSRGCGVVEYATEADSANAIATL 154
Query: 183 DDTEFRNPWARGRITVKRYDRSPSRSRSRSRS 214
+DTE +GR+ R DR P++ R+++
Sbjct: 155 NDTEL-----QGRLIFVREDREPNQPLRRNKT 181
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 89/218 (40%), Gaps = 39/218 (17%)
Query: 6 SRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIP--PRPPCYCFVEFENARDAEDAIR 63
SR +YVGNL + ++D K G ++ E+ R VE+ D+ +AI
Sbjct: 93 SRRVYVGNLAWSVSWQALKDHMRKAGEVVFAEVFTERDGRSRGCGVVEYATEADSANAIA 152
Query: 64 GRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHS 123
+ G + V R P+ RR A G GA A G +RH
Sbjct: 153 TLNDTELQGRLIFVR-----EDREPNQPLRRNKTS---ASGFHGANATTG------NRHH 198
Query: 124 EYR---------------VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEG---TYG 165
E R +IV LP S +WQDLKD R G++ A++ D EG G
Sbjct: 199 EARGRNQPPSFPSDKGRKIIVWNLPYSYTWQDLKDEFRACGNIIRADILIDQEGRSRGAG 258
Query: 166 VVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDR 203
+ + + ED + AI+ +D E GRI R D+
Sbjct: 259 TIVFESEEDAQRAIQMMDRAEL-----AGRIVDVRLDK 291
>gi|402591118|gb|EJW85048.1| hypothetical protein WUBG_04041 [Wuchereria bancrofti]
Length = 141
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VG LP+D E+E+ F KYGRI + L RPP + F+EFE++RDAEDA++G DG
Sbjct: 12 VFVGGLPNDASSEELEEAFSKYGRIKKVWLA--RRPPGFAFIEFEDSRDAEDAVKGLDGT 69
Query: 69 NFDGCRLRVELAH 81
G R RVE +H
Sbjct: 70 RICGVRPRVEFSH 82
>gi|341886966|gb|EGT42901.1| hypothetical protein CAEBREN_25648 [Caenorhabditis brenneri]
Length = 183
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LPSD E+E++F ++GRI ++ + RPP + FVE+++ RDAEDA+R DG
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIR--KVWVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 69 NFDGCRLRVELAHG 82
G R RVEL+ G
Sbjct: 63 RICGVRARVELSTG 76
>gi|308493016|ref|XP_003108698.1| hypothetical protein CRE_10826 [Caenorhabditis remanei]
gi|308248438|gb|EFO92390.1| hypothetical protein CRE_10826 [Caenorhabditis remanei]
Length = 277
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LPSD E+E++F ++GRI + + RPP + FVE+++ RDAEDA+R DG
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKV--WVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 69 NFDGCRLRVELAHG 82
G R RVEL+ G
Sbjct: 63 RICGVRARVELSTG 76
>gi|268552699|ref|XP_002634332.1| C. briggsae CBR-RSP-6 protein [Caenorhabditis briggsae]
Length = 157
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LPSD E+E++F ++GRI + + RPP + FVE+++ RDAEDA+R DG
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKV--WVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 69 NFDGCRLRVELAHG 82
G R RVEL+ G
Sbjct: 63 RICGVRARVELSTG 76
>gi|156098601|ref|XP_001615316.1| alternative splicing factor ASF-1 [Plasmodium vivax Sal-1]
gi|148804190|gb|EDL45589.1| alternative splicing factor ASF-1, putative [Plasmodium vivax]
Length = 208
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 84/191 (43%), Gaps = 19/191 (9%)
Query: 2 SGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKI--PPRPPCYCFVEFENARDAE 59
+G+ IYVGN+P + + E+ F ++G+I +I++K Y F+E+E+ + AE
Sbjct: 3 AGKSGHRIYVGNIPGSMSKQEIIKAFEEFGKITEIDIKYNRNTNGTNYAFIEYESYKSAE 62
Query: 60 DAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGG--GAGGAGGAGAGAGAGRF 117
I ++G G L+VE S D++ GG GG G
Sbjct: 63 KTIENKNGQKLKGYMLKVEY----------SIDKKNKEGGDLIALGGREAVSKGLLTNVR 112
Query: 118 GISRHSEYRVIVRGLPSSASWQD-LKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMK 176
S YRV+V+ P D +K + KAG V + ++ E + +Y E M
Sbjct: 113 LPKNRSHYRVVVKNFPRKKIKLDGIKTFLMKAGKVIYTQL----EDEITIAEYDCREGML 168
Query: 177 YAIRKLDDTEF 187
A+ LD T F
Sbjct: 169 RAVNTLDRTMF 179
>gi|221122641|ref|XP_002154006.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Hydra
magnipapillata]
Length = 259
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 93/186 (50%), Gaps = 23/186 (12%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L + + E +++ F YG+I DI +K Y FV+F++ RDA+DA+ +G
Sbjct: 4 LYVGRLNNRVIERDLKKFFDNYGKIRDIMMK-----NGYAFVDFDDYRDADDAVYDLNGK 58
Query: 69 NFDGCRLRVELAHG---GSGRGPSSSDR----RGGYGGGGAGGAGGAGAGAGAGRFGISR 121
G R+ +E A G GSG P +R R G+G ++G
Sbjct: 59 ELMGDRVIIEHAKGIERGSGGAPYGRERFKDDRSGFG----------RKQRARDKYGPPV 108
Query: 122 HSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRK 181
+++ + V L S SWQDLKD+ R +V +A+ R G + T EDMK IRK
Sbjct: 109 RTKWMLRVENLSSRVSWQDLKDYCRPHAEVTYADAHRKERGVACICTSTY-EDMKNLIRK 167
Query: 182 LDDTEF 187
+D+TE
Sbjct: 168 IDNTEL 173
>gi|119491909|ref|XP_001263449.1| pre-RNA splicing factor Srp2, putative [Neosartorya fischeri NRRL
181]
gi|119411609|gb|EAW21552.1| pre-RNA splicing factor Srp2, putative [Neosartorya fischeri NRRL
181]
Length = 258
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 95/207 (45%), Gaps = 30/207 (14%)
Query: 47 YCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRG--PSSSDRRGGYGGGGAGG 104
+ F+E+E+A DA D + DG +F G RL V+ A G + P +DR
Sbjct: 4 FGFIEYEDAMDARDVVP--DGSDFKGERLTVQFARGPRRKENFPGPTDRPN--------- 52
Query: 105 AGGAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGT 163
R + +R++V GLP + SWQDLKD R++G DV ++E R E
Sbjct: 53 ------------MPRPRRTIFRMLVSGLPET-SWQDLKDFARQSGLDVVYSETGR--EQG 97
Query: 164 YGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRSRIV 223
G V++ D+K AI KLD EF+ ++ +D R RSRS RS I
Sbjct: 98 RGFVEFETAADLKTAIDKLDGREFKGSRVSCVADIQPHDDRIFRDPYRSRSPRRSYPPID 157
Query: 224 RRNRSKSLERSVS-RSVSRSMSASPVK 249
+R R S R+ R S P++
Sbjct: 158 EYDRRFPAPRGYSPRAHYRERSPVPLR 184
>gi|112983196|ref|NP_001037604.1| RNA-binding protein 1 [Bombyx mori]
gi|95115204|gb|ABF55968.1| Rbp1 [Bombyx mori]
Length = 156
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ +YE+E +F KYG I ++ + PP + FVEFE+ RDAED++RG DG
Sbjct: 13 VYVGNLGTNASKYEIEKIFSKYGNIRNV--WVARNPPGFAFVEFEDPRDAEDSVRGLDGT 70
Query: 69 NFDGCRLRVELAHGGSGR 86
G R+RVE+++G + R
Sbjct: 71 RCCGTRIRVEMSNGRTRR 88
>gi|268575776|ref|XP_002642868.1| Hypothetical protein CBG15138 [Caenorhabditis briggsae]
Length = 339
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 118/266 (44%), Gaps = 33/266 (12%)
Query: 8 TIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPC-YCFVEF-ENARDAEDAI--- 62
T++VGNLP +E +VED+F +YG I +I KI C FV+F E+++ + D +
Sbjct: 12 TVFVGNLPFKTKESQVEDMFQQYGFIRNI--KIKREFGCAIAFVQFRESSQFSTDFLLFF 69
Query: 63 -RGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGR----- 116
R N + L L+ + SD G G
Sbjct: 70 HRKIPNSNLNAT-LTTPLSIEYFMLKLAFSDADFAVYGVNNAVVGNFRVYTDLTTGFVEP 128
Query: 117 -------FGISRHSEYR-----VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTY 164
F I + S+ R VIV LPSSASWQD+KDHMR + V ++ Y
Sbjct: 129 WSYSYDAFEIPKESKLRPLKFLVIVDNLPSSASWQDVKDHMRDTHGIKSTNVDFKTDRAY 188
Query: 165 GVVDYTNPEDMKYAIRKLDDTEFRNPWARGR-ITVKRYDRSPSRS----RSRSRSRSRSR 219
V++ + +YA+++ + FR+ R I V+ +P + ++RS +R RS
Sbjct: 189 --VEFEDQRGAEYAVKRYHQSLFRSHRGETRYINVRLGTPNPHKFADNIKNRSFTRQRSM 246
Query: 220 SRIVRRNRSKSLERSVSRSVSRSMSA 245
S I R + + L+R R RS+S
Sbjct: 247 SPIRRSSGGRDLKRVAFRDERRSVSC 272
>gi|194767988|ref|XP_001966096.1| GF19500 [Drosophila ananassae]
gi|190622981|gb|EDV38505.1| GF19500 [Drosophila ananassae]
Length = 179
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL S +YE+E+ F KYG + ++ + PP + FVEFE+ RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNVW--VARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 NFDGCRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|195394324|ref|XP_002055795.1| GJ10582 [Drosophila virilis]
gi|194142504|gb|EDW58907.1| GJ10582 [Drosophila virilis]
Length = 140
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL S ++E+E+ F KYG + ++ I PP + FVEFE+ RDAEDA R DG
Sbjct: 13 VYVGNLGSSASKFEIENAFNKYGPLRNVW--IARNPPGFAFVEFEDRRDAEDATRALDGT 70
Query: 69 NFDGCRLRVELAHGGS 84
G R+RVE++ G S
Sbjct: 71 RCCGTRIRVEMSSGRS 86
>gi|391333364|ref|XP_003741086.1| PREDICTED: serine/arginine-rich splicing factor 3-like
[Metaseiulus occidentalis]
Length = 162
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+GNL + ++VE +F KYG + ++ + PP + FVEFE++RDAEDA+R DG
Sbjct: 12 VYIGNLATHASRHDVESVFSKYGNLRNV--WVARNPPGFAFVEFEDSRDAEDAVRAVDGS 69
Query: 69 NFDGCRLRVELAHG 82
G R++ E++HG
Sbjct: 70 RICGSRVKCEMSHG 83
>gi|353241704|emb|CCA73501.1| related to pre-mrna splicing factor srp55 [Piriformospora indica
DSM 11827]
Length = 194
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 89/185 (48%), Gaps = 29/185 (15%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
SR +YVG LP D+ +V F R+ ++ +I + F+EF+++ D + A+R
Sbjct: 1 MSRRLYVGKLPPDVNSEDVRRFFEDEARVKVVDCRIMT---GFGFIEFDSSEDMDTALR- 56
Query: 65 RDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
DG++F G + V++A R + R + R G++
Sbjct: 57 LDGHDFQGQPILVQVAREKPPRREPPREMR-----------------SSGRRQGVT---- 95
Query: 125 YRVIVRGLPSSASWQDLKDHMRKA-GDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLD 183
VIV + SWQDLKD R+A G V F+++ RD G+++Y E+ + A+R+LD
Sbjct: 96 --VIVSNVSRDVSWQDLKDFGREAGGGVIFSDIDRDVPNQ-GILEYYTAEEAERAVRELD 152
Query: 184 DTEFR 188
E R
Sbjct: 153 GRELR 157
>gi|270000727|gb|EEZ97174.1| hypothetical protein TcasGA2_TC004361 [Tribolium castaneum]
Length = 123
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL S ++E+E F KYG + ++ + PP + FVEFE+ RDAEDA+RG
Sbjct: 9 LSCKVYVGNLGSSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRG 66
Query: 65 RDGYNFDGCRLRVELAH 81
DG G R+RVE+++
Sbjct: 67 LDGTRCCGTRVRVEMSN 83
>gi|307187926|gb|EFN72839.1| RNA-binding protein 1 [Camponotus floridanus]
Length = 213
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL S ++E+E F KYG + +I + PP + FVEFE+ RDAEDA+RG
Sbjct: 9 LSCKVYVGNLGSSASKHELEGKFSKYGPLRNIW--VARNPPGFAFVEFEDPRDAEDAVRG 66
Query: 65 RDGYNFDGCRLRVEL 79
DG + G R+RVE+
Sbjct: 67 LDGVHLCGTRVRVEM 81
>gi|193636560|ref|XP_001952396.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Acyrthosiphon pisum]
gi|328724544|ref|XP_003248180.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Acyrthosiphon pisum]
Length = 181
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
Query: 2 SGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDA 61
SG IYVG+L S + ++ED F YG I ++ + PP + FVEFE+ RDAEDA
Sbjct: 10 SGNPDCKIYVGDLGSSASKQDLEDAFSYYGSIRNV--WVARNPPGFAFVEFEDPRDAEDA 67
Query: 62 IRGRDGYNFDGCRLRVELAHGGSGRG 87
+RG DG + G R+RVEL++ GS +G
Sbjct: 68 VRGLDGRSICGRRVRVELSNAGSRKG 93
>gi|297259798|ref|XP_001084701.2| PREDICTED: hypothetical protein LOC696054 [Macaca mulatta]
Length = 294
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 92 DRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDV 151
D + G GGGG + +G ++G +EYR+IV L S SWQDLKD MR+AG+V
Sbjct: 32 DLKNGCGGGGY----SSRRTSGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEV 87
Query: 152 CFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
+A+ ++ GV+++ + DMK A+ KLD TE
Sbjct: 88 TYADAHKERTNE-GVIEFRSYSDMKRALDKLDGTEI 122
>gi|172046468|emb|CAQ34906.1| SR family splicing factor 9G8 [Chironomus tentans]
Length = 216
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG+L S+ + E+ED F YG + + + PP + FVEFE+ARDAEDA+RG DG
Sbjct: 16 VYVGDLGSNADKQEIEDAFSYYGPLRSVW--VARNPPGFAFVEFEDARDAEDAVRGLDGR 73
Query: 69 NFDGCRLRVELAHGGSG 85
G R RVEL+ G S
Sbjct: 74 TICGRRARVELSTGKSA 90
>gi|328724546|ref|XP_003248181.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 3
[Acyrthosiphon pisum]
gi|328724548|ref|XP_003248182.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 4
[Acyrthosiphon pisum]
Length = 137
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
Query: 2 SGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDA 61
SG IYVG+L S + ++ED F YG I ++ + PP + FVEFE+ RDAEDA
Sbjct: 10 SGNPDCKIYVGDLGSSASKQDLEDAFSYYGSIRNVW--VARNPPGFAFVEFEDPRDAEDA 67
Query: 62 IRGRDGYNFDGCRLRVELAHGGSGRG 87
+RG DG + G R+RVEL++ GS +G
Sbjct: 68 VRGLDGRSICGRRVRVELSNAGSRKG 93
>gi|242023192|ref|XP_002432020.1| transformer-2 sex-determining protein, putative [Pediculus
humanus corporis]
gi|212517371|gb|EEB19282.1| transformer-2 sex-determining protein, putative [Pediculus
humanus corporis]
Length = 132
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL ++ +YE+E +F KYG + ++ + PP + F+EFE+ RDAEDA+RG
Sbjct: 9 LSCKVYVGNLGNNGSKYELECIFSKYGPLRNV--WVARNPPGFAFIEFEDPRDAEDAVRG 66
Query: 65 RDGYNFDGCRLRVELAHG 82
DG G R RVE++ G
Sbjct: 67 LDGSRMCGTRARVEMSSG 84
>gi|270012981|gb|EFA09429.1| hypothetical protein TcasGA2_TC010640 [Tribolium castaneum]
Length = 202
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG+L + + E+ED F YG + ++ + PP + FVEFE+ARDAEDAIRG DG
Sbjct: 10 VYVGDLGNSASKQELEDAFRYYGPLRNV--WVARNPPGFAFVEFEDARDAEDAIRGLDGR 67
Query: 69 NFDGCRLRVELAHGGSGRG 87
G R RVE+++G SG G
Sbjct: 68 TICGRRARVEMSNGKSGSG 86
>gi|189241002|ref|XP_968789.2| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
Length = 200
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG+L + + E+ED F YG + ++ + PP + FVEFE+ARDAEDAIRG DG
Sbjct: 10 VYVGDLGNSASKQELEDAFRYYGPLRNV--WVARNPPGFAFVEFEDARDAEDAIRGLDGR 67
Query: 69 NFDGCRLRVELAHGGSGRG 87
G R RVE+++G SG G
Sbjct: 68 TICGRRARVEMSNGKSGSG 86
>gi|322801941|gb|EFZ22488.1| hypothetical protein SINV_01609 [Solenopsis invicta]
Length = 289
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL S ++E+E F KYG + ++ + PP + FVEFE+ RDAEDA+RG
Sbjct: 36 LSCKVYVGNLGSSASKHEIESAFSKYGPLRNVW--VARNPPGFAFVEFEDPRDAEDAVRG 93
Query: 65 RDGYNFDGCRLRVEL 79
DG G R+RVE+
Sbjct: 94 LDGTRCCGTRVRVEM 108
>gi|76155295|gb|AAX26558.2| SJCHGC09454 protein [Schistosoma japonicum]
Length = 208
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 116 RFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDM 175
R+G +EYRVIV L S SWQDLKD MRKAG+V +A+ + ++ G+V++ DM
Sbjct: 7 RYGPPTRTEYRVIVENLSSRVSWQDLKDLMRKAGEVTYADAHKSAKND-GIVEFAAYADM 65
Query: 176 KYAIRKLDDTEF 187
K AI K D E
Sbjct: 66 KEAIEKFDGYEL 77
>gi|25144922|ref|NP_741447.1| Protein RSP-6, isoform b [Caenorhabditis elegans]
gi|351058800|emb|CCD66575.1| Protein RSP-6, isoform b [Caenorhabditis elegans]
Length = 153
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LPSD E+E++F ++GRI ++ + RPP + FVE+++ RDAEDA+R DG
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIR--KVWVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 69 NFDGCRLRVELA 80
G R RVEL+
Sbjct: 63 RICGVRARVELS 74
>gi|448878364|gb|AGE46145.1| arginine/serine-rich splicing factor SR30 transcript IV [Sorghum
bicolor]
Length = 97
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 43/71 (60%), Gaps = 19/71 (26%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYK-------------------YGRILDIELKIP 41
M+ R TIYVGNLP DIRE EV+DLFYK YGRI++I+LKIP
Sbjct: 1 MTRRNGCTIYVGNLPGDIREREVDDLFYKSNGWSSGREGNVDCEWSIFYGRIVEIDLKIP 60
Query: 42 PRPPCYCFVEF 52
PRPP + FVE
Sbjct: 61 PRPPGFAFVEL 71
>gi|443725387|gb|ELU13010.1| hypothetical protein CAPTEDRAFT_155910 [Capitella teleta]
Length = 268
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG+LP D +E E+E F YG + + + PP + FVEFE+ RDA+D++RG DG
Sbjct: 32 VYVGDLPRDAQEKELERAFSYYGPLKSVWVAR--NPPGFAFVEFEDPRDADDSVRGLDGS 89
Query: 69 NFDGCRLRVELAHG 82
+ G R+RVEL+ G
Sbjct: 90 SLCGTRVRVELSTG 103
>gi|307187925|gb|EFN72838.1| RNA-binding protein 1 [Camponotus floridanus]
Length = 101
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL S ++E+E F KYG + ++ + PP + FVEFE+ RDAEDA+RG
Sbjct: 9 LSCKVYVGNLGSSASKHEIEGKFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRG 66
Query: 65 RDGYNFDGCRLRVEL 79
DG + G R+RVE+
Sbjct: 67 LDGIHLCGTRVRVEM 81
>gi|399217969|emb|CCF74856.1| unnamed protein product [Babesia microti strain RI]
Length = 385
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 78/182 (42%), Gaps = 32/182 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VGN+P D E++ +F K G ++ +++ + F+E+ A DA+ +GY
Sbjct: 175 VFVGNIPLDTTVDELKAVFEKCGELVKCDMRK-----RFAFIEYHKPESASDALNQLNGY 229
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE-YRV 127
G +++V+ S R + RH Y V
Sbjct: 230 ILHGEKIKVKPHSDNSNRY--------------------------REKVPPPRHKPGYAV 263
Query: 128 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEF 187
V + + SWQDLKD R AG+V +A + YGV++Y PE K A+ +L +
Sbjct: 264 TVANIEETTSWQDLKDFGRLAGEVSYASIVIKDGKKYGVIEYLAPESAKNALVELQGKQI 323
Query: 188 RN 189
N
Sbjct: 324 TN 325
>gi|225713170|gb|ACO12431.1| Splicing factor, arginine/serine-rich 4 [Lepeophtheirus salmonis]
Length = 129
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 70/139 (50%), Gaps = 14/139 (10%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M G R +Y+GN+ D RE +VE F YG++ ++ LK Y FVEFE+ RDA+D
Sbjct: 1 MPGNHHR-LYLGNISDDTRERDVEKFFKGYGKLREVALK-----NGYGFVEFEDHRDADD 54
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
A++ DG + +G R+RVE A R P R Y + G G G
Sbjct: 55 AVQDLDGKDMNGSRVRVEFA-----RSPREK-RNSRYQSRRSPPRGRRGPPMKRNPPG-- 106
Query: 121 RHSEYRVIVRGLPSSASWQ 139
R ++YR+ V L + SWQ
Sbjct: 107 RRTQYRIRVENLSTRTSWQ 125
>gi|388582374|gb|EIM22679.1| RNA-binding domain-containing protein, partial [Wallemia sebi CBS
633.66]
Length = 202
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 85/191 (44%), Gaps = 9/191 (4%)
Query: 2 SGRFSRT-IYVGNLPSDIREYEVEDLFYKYGRIL--DIELKIPPRPPCYCFVEFENARDA 58
SGR RT ++VGNLP +R +++DLF K G +L D+ L + R Y V + DA
Sbjct: 11 SGRDGRTHLFVGNLPYRVRWQDLKDLFRKAGTVLRADVALGLDNRSKGYGNVLMGSEIDA 70
Query: 59 EDAIRGRDGYNFDGCRLRVE---LAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAG 115
AI +GY + L V L GP S A G+ A
Sbjct: 71 AKAIELYNGYVWQTRTLEVRPDRLPPEYDLPGPQSQPHNQTIRPARTLRALGSSPPANLA 130
Query: 116 RFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGT---YGVVDYTNP 172
+ + V LP + WQ+LKD R AG+V AEV+ + +GT YG++ + +
Sbjct: 131 TASTPSLTNRNIFVGNLPYNMQWQELKDTFRAAGNVIRAEVATNHDGTSKGYGIITFADE 190
Query: 173 EDMKYAIRKLD 183
+ ++ D
Sbjct: 191 SEAIQGVQMFD 201
Score = 37.0 bits (84), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 111 GAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVS 157
GAG G G R + V LP WQDLKD RKAG V A+V+
Sbjct: 5 GAGIGASG--RDGRTHLFVGNLPYRVRWQDLKDLFRKAGTVLRADVA 49
>gi|225717656|gb|ACO14674.1| RNA-binding protein 1 [Caligus clemensi]
Length = 139
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL + ++E+ED+F +YG++ + + PP + FVEFE+ RDAEDA +G DG
Sbjct: 14 VYVGNLGDNASKHEIEDVFRRYGKVRSVW--VARNPPGFAFVEFEDERDAEDAAKGLDGS 71
Query: 69 NFDGCRLRVELA 80
G R VE++
Sbjct: 72 RICGVRAAVEMS 83
>gi|195438960|ref|XP_002067399.1| GK16401 [Drosophila willistoni]
gi|194163484|gb|EDW78385.1| GK16401 [Drosophila willistoni]
Length = 176
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL S +YE+E+ F KYG + ++ + PP + FVEFE+ RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 NFDGCRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|427795611|gb|JAA63257.1| Hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 127
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M +YVGNL S ++E+E F K+G + ++ + PP + FVEFE++RDAED
Sbjct: 21 MEWSLDCKVYVGNLGSGAAKHEIEAAFTKFGPLRNVW--VARNPPGFAFVEFEDSRDAED 78
Query: 61 AIRGRDGYNFDGCRLRVELAH 81
A R DG G R+RVE++H
Sbjct: 79 ACRALDGSRLCGTRVRVEMSH 99
>gi|332027347|gb|EGI67431.1| RNA-binding protein 1 [Acromyrmex echinatior]
Length = 133
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL S ++E+E F KYG + ++ + PP + FVEFE+ RDAEDA+RG
Sbjct: 9 LSCKVYVGNLGSSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRG 66
Query: 65 RDGYNFDGCRLRVEL 79
DG G R+RVE+
Sbjct: 67 LDGTRCCGTRVRVEM 81
>gi|308509716|ref|XP_003117041.1| CRE-RSP-1 protein [Caenorhabditis remanei]
gi|308241955|gb|EFO85907.1| CRE-RSP-1 protein [Caenorhabditis remanei]
Length = 308
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 91/189 (48%), Gaps = 17/189 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IY+G L S + E ++E F YG+I D+ LK + FVEF++ RDAEDA+ +G
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK-----NGFGFVEFDDKRDAEDAVHDLNGK 59
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGA---------GRFGI 119
G R+ ++ + G G S RGG GG GG R+G
Sbjct: 60 ELGGERVILDYSKPRGGGGFSDRGGRGGGRVSSYGGGGGRDRFDRFDRGGPPKRESRYGR 119
Query: 120 SRHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYGVVDYTNPEDMKYA 178
+ +RV+V L S SWQDLKD +R+ G + +AE + ++ + +P D+K
Sbjct: 120 PYSTRHRVLVENLSSRISWQDLKDQVRRQGVEPTYAEAHK--RPNEALLCFASPTDLKRC 177
Query: 179 IRKLDDTEF 187
I K D +
Sbjct: 178 IEKCDGMDL 186
>gi|346467797|gb|AEO33743.1| hypothetical protein [Amblyomma maculatum]
Length = 239
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 116 RFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDM 175
R+G +EY++ V L S SWQDLKD+MR+AG+V +A+ R GVV++ DM
Sbjct: 25 RYGPPTRTEYQLTVENLSSRVSWQDLKDYMRQAGEVTYADAHRLRRNE-GVVEFATYSDM 83
Query: 176 KYAIRKLDDTEF 187
K A+ KLD+T+
Sbjct: 84 KNALEKLDNTDL 95
>gi|56758208|gb|AAW27244.1| SJCHGC09413 protein [Schistosoma japonicum]
Length = 214
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G+LP + E E+E +F +YGR+ ++ + PP + FVEFE+A DA DA+R DG
Sbjct: 12 VYIGDLPREASERELERIFREYGRLRNV--WVARNPPGFAFVEFEDAADASDAVRELDGT 69
Query: 69 NFDGCRLRVELAHGGSGRGP 88
G R RVEL+ G S + P
Sbjct: 70 VMCGVRARVELSTGKSRQKP 89
>gi|346466769|gb|AEO33229.1| hypothetical protein [Amblyomma maculatum]
Length = 289
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 116 RFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDM 175
R+G +EY++ V L S SWQDLKD+MR+AG+V +A+ R GVV++ DM
Sbjct: 41 RYGPPTRTEYQLTVENLSSRVSWQDLKDYMRQAGEVTYADAHRLRRNE-GVVEFATYSDM 99
Query: 176 KYAIRKLDDTEF 187
K A+ KLD+T+
Sbjct: 100 KNALEKLDNTDL 111
>gi|25144924|ref|NP_741448.1| Protein RSP-6, isoform c [Caenorhabditis elegans]
gi|351058801|emb|CCD66576.1| Protein RSP-6, isoform c [Caenorhabditis elegans]
Length = 118
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LPSD E+E++F ++GRI ++ + RPP + FVE+++ RDAEDA+R DG
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIR--KVWVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 69 NFDGCRLRVELA 80
G R RVEL+
Sbjct: 63 RICGVRARVELS 74
>gi|25144919|ref|NP_741446.1| Protein RSP-6, isoform a [Caenorhabditis elegans]
gi|56749458|sp|Q18409.1|RSP6_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 6;
AltName: Full=CeSRp20; AltName: Full=RNA-binding
protein srp-1
gi|351058799|emb|CCD66574.1| Protein RSP-6, isoform a [Caenorhabditis elegans]
Length = 179
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LPSD E+E++F ++GRI ++ + RPP + FVE+++ RDAEDA+R DG
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIR--KVWVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 69 NFDGCRLRVELA 80
G R RVEL+
Sbjct: 63 RICGVRARVELS 74
>gi|347972231|ref|XP_003436864.1| AGAP004592-PC [Anopheles gambiae str. PEST]
gi|347972233|ref|XP_003436865.1| AGAP004592-PG [Anopheles gambiae str. PEST]
gi|333469346|gb|EGK97257.1| AGAP004592-PC [Anopheles gambiae str. PEST]
gi|333469350|gb|EGK97261.1| AGAP004592-PG [Anopheles gambiae str. PEST]
Length = 132
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 66/131 (50%), Gaps = 10/131 (7%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A G+ RGPS R G + R+G +EYR++
Sbjct: 61 ELLGERVVVEPAR-GTARGPSGYRER----DRYDRDRRGGRYDKNSSRYGPPLRTEYRLV 115
Query: 129 VRGLPSSASWQ 139
V L + SWQ
Sbjct: 116 VENLSTRVSWQ 126
>gi|256089259|ref|XP_002580730.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|350646106|emb|CCD59208.1| arginine/serine-rich splicing factor, putative [Schistosoma
mansoni]
Length = 171
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G+LP + E E+E +F +YGR+ ++ + PP + FVEFE+A DA DA+R DG
Sbjct: 12 VYIGDLPREASERELERIFREYGRLRNV--WVARNPPGFAFVEFEDAADASDAVRELDGT 69
Query: 69 NFDGCRLRVELAHGGSGRGP 88
G R RVEL+ G S + P
Sbjct: 70 VMCGVRARVELSTGKSRQKP 89
>gi|307180295|gb|EFN68328.1| Splicing factor, arginine/serine-rich 7 [Camponotus floridanus]
Length = 156
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG+L S + E+ED F YG + ++ + PP + FVEFE+ RDAEDA+RG DG
Sbjct: 13 VYVGDLGSSASKQELEDAFSYYGSLQNV--WVARNPPGFAFVEFEDPRDAEDAVRGLDGR 70
Query: 69 NFDGCRLRVELAHG 82
G R+RVEL++G
Sbjct: 71 TLCGRRVRVELSNG 84
>gi|91094459|ref|XP_967049.1| PREDICTED: similar to AGAP007325-PA isoform 1 [Tribolium
castaneum]
Length = 129
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL S ++E+E F KYG + ++ + PP + FVEFE+ RDAEDA+RG
Sbjct: 9 LSCKVYVGNLGSSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRG 66
Query: 65 RDGYNFDGCRLRVELAH 81
DG G R+RVE+++
Sbjct: 67 LDGTRCCGTRVRVEMSN 83
>gi|346473189|gb|AEO36439.1| hypothetical protein [Amblyomma maculatum]
Length = 141
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M +YVGNL S ++E+E F K+G + ++ + PP + FVEFE++RDAED
Sbjct: 1 MEWSLDCKVYVGNLGSGAAKHEIEAAFTKFGPLRNV--WVARNPPGFAFVEFEDSRDAED 58
Query: 61 AIRGRDGYNFDGCRLRVELAH 81
A R DG G R+RVE++H
Sbjct: 59 ACRALDGSRLCGTRVRVEMSH 79
>gi|321469591|gb|EFX80571.1| hypothetical protein DAPPUDRAFT_304081 [Daphnia pulex]
Length = 162
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL S+ E+E+ F KYG + ++ + PP + FVEFE+ RDAEDA+R DG
Sbjct: 14 VYVGNLGSNAARGEIEEAFSKYGTLRNVW--VARNPPGFAFVEFEDPRDAEDAVRALDGV 71
Query: 69 NFDGCRLRVELAHG 82
G R++VE++ G
Sbjct: 72 RLCGARVKVEMSTG 85
>gi|261194216|ref|XP_002623513.1| pre-RNA splicing factor Srp2 [Ajellomyces dermatitidis SLH14081]
gi|239588527|gb|EEQ71170.1| pre-RNA splicing factor Srp2 [Ajellomyces dermatitidis SLH14081]
Length = 258
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 73/143 (51%), Gaps = 26/143 (18%)
Query: 47 YCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAG 106
+ F+E+E+A DA+D + DG +F G RL V+ A RGP +
Sbjct: 4 FGFIEYEDAMDAKDVVP--DGTDFKGERLTVQFA-----RGPRHKE-----------TFS 45
Query: 107 GAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGTYG 165
G + A R R + YR+ + GLP + SWQDLKD R++G DV ++E D G
Sbjct: 46 GPSDRSSAPR---PRRTIYRMQISGLPET-SWQDLKDFARQSGLDVVYSETGHDGRG--- 98
Query: 166 VVDYTNPEDMKYAIRKLDDTEFR 188
V++ D+K A+ KLD EF+
Sbjct: 99 FVEFETGSDLKTAVEKLDGREFK 121
>gi|390176510|ref|XP_003736158.1| GA30013 [Drosophila pseudoobscura pseudoobscura]
gi|388858711|gb|EIM52231.1| GA30013 [Drosophila pseudoobscura pseudoobscura]
Length = 259
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R +YVG+L ++ R+ ++E +F YG + + I PP + FVEFE+ARDA DA+RG D
Sbjct: 8 RKVYVGDLGNNARKNDLEYVFGAYGSLRSVW--IARNPPGFAFVEFESARDAADAVRGLD 65
Query: 67 GYNFDGCRLRVELAHG 82
G G R RVEL+ G
Sbjct: 66 GRTVCGRRARVELSTG 81
>gi|91094467|ref|XP_976127.1| PREDICTED: similar to AGAP007325-PA isoform 5 [Tribolium
castaneum]
Length = 111
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL S ++E+E F KYG + ++ + PP + FVEFE+ RDAEDA+RG
Sbjct: 9 LSCKVYVGNLGSSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRG 66
Query: 65 RDGYNFDGCRLRVELAH 81
DG G R+RVE+++
Sbjct: 67 LDGTRCCGTRVRVEMSN 83
>gi|346473483|gb|AEO36586.1| hypothetical protein [Amblyomma maculatum]
Length = 131
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M +YVGNL S ++E+E F K+G + ++ + PP + FVEFE++RDAED
Sbjct: 1 MEWSLDCKVYVGNLGSGAAKHEIEAAFTKFGPLRNV--WVARNPPGFAFVEFEDSRDAED 58
Query: 61 AIRGRDGYNFDGCRLRVELAH 81
A R DG G R+RVE++H
Sbjct: 59 ACRALDGSRLCGTRVRVEMSH 79
>gi|29841408|gb|AAP06440.1| similar to NM_006276 splicing factor, arginine/serine-rich 7
[Schistosoma japonicum]
gi|226472076|emb|CAX77076.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472078|emb|CAX77077.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472080|emb|CAX77078.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472082|emb|CAX77079.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472084|emb|CAX77080.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
Length = 169
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G+LP + E E+E +F +YGR+ ++ + PP + FVEFE+A DA DA+R DG
Sbjct: 12 VYIGDLPREASERELERIFREYGRLRNV--WVARNPPGFAFVEFEDAADASDAVRELDGT 69
Query: 69 NFDGCRLRVELAHGGSGRGP 88
G R RVEL+ G S + P
Sbjct: 70 VMCGVRARVELSTGKSRQKP 89
>gi|256089261|ref|XP_002580731.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|350646105|emb|CCD59207.1| arginine/serine-rich splicing factor, putative [Schistosoma
mansoni]
Length = 157
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G+LP + E E+E +F +YGR+ ++ + PP + FVEFE+A DA DA+R DG
Sbjct: 12 VYIGDLPREASERELERIFREYGRLRNV--WVARNPPGFAFVEFEDAADASDAVRELDGT 69
Query: 69 NFDGCRLRVELAHGGSGRGP 88
G R RVEL+ G S + P
Sbjct: 70 VMCGVRARVELSTGKSRQKP 89
>gi|300681335|emb|CAZ96065.1| arginine/serine-rich splicing factor [Saccharum hybrid cultivar
R570]
Length = 324
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 79/183 (43%), Gaps = 27/183 (14%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R I+ GNL D+R EVE LF KYGR+ ++LK R + FV E+ RDAEDAI D
Sbjct: 26 RPIFCGNLDYDVRISEVERLFGKYGRVERVDLKTVERSGGFAFVYMEDERDAEDAIHRLD 85
Query: 67 GYNF--DGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
G +F G R+RVE G S RR +R ++
Sbjct: 86 GIDFGRKGRRIRVEWTKEDRTVGRRGSSRRSPTN---------------------ARPTK 124
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDD 184
++ P + +DL+ H K G V + ++ + V + ED A+ +
Sbjct: 125 TLFVINFDPINTRIRDLERHFDKYGRVANVRIKKN----FAFVQFEVQEDATRALEGTNG 180
Query: 185 TEF 187
+ F
Sbjct: 181 SHF 183
>gi|291409640|ref|XP_002721124.1| PREDICTED: splicing factor SRp55 homolog [Oryctolagus cuniculus]
Length = 284
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 106 GGAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYG 165
G+ +G ++G +EYR+IV L S SWQDLKD MR+AG+V +A+ ++ G
Sbjct: 35 NGSRRTSGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNE-G 93
Query: 166 VVDYTNPEDMKYAIRKLDDTEF 187
V+++ + DMK A+ KLD TE
Sbjct: 94 VIEFRSYSDMKRALDKLDGTEI 115
>gi|442757015|gb|JAA70666.1| Putative alternative splicing factor srp20/9g8 rrm superfamily
[Ixodes ricinus]
Length = 141
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M +YVGNL S ++E+E F K+G + ++ + PP + FVEFE++RDAED
Sbjct: 1 MEWSLDCKVYVGNLGSGAAKHEIEAAFTKFGPLRNV--WVARNPPGFAFVEFEDSRDAED 58
Query: 61 AIRGRDGYNFDGCRLRVELAH 81
A R DG G R+RVE++H
Sbjct: 59 ACRALDGSRLCGTRVRVEMSH 79
>gi|198430457|ref|XP_002119659.1| PREDICTED: similar to splicing factor, arginine/serine-rich 3
[Ciona intestinalis]
Length = 185
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 2 SGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDA 61
SG +YVGNL S + E+E +F YG + ++ + PP + FVEFE+ RDAEDA
Sbjct: 6 SGPLDCKVYVGNLGSQGSKNELERVFGYYGALKNVW--VARNPPGFAFVEFEDNRDAEDA 63
Query: 62 IRGRDGYNFDGCRLRVELAHGGSGRG 87
+R DG G R RVE++ G S RG
Sbjct: 64 VRALDGRTVCGVRARVEMSSGQSRRG 89
>gi|294899382|ref|XP_002776614.1| arginine/serine-rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239883668|gb|EER08430.1| arginine/serine-rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 138
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDD 184
YRV+V LP ASWQDLKD MR AG+ F EV+RD G G + D++ A+R LDD
Sbjct: 41 YRVVVTNLPRGASWQDLKDKMRDAGECRFTEVTRDGVGVAG---FAGQSDVERAVRTLDD 97
Query: 185 TEFRNPW 191
TE ++ +
Sbjct: 98 TEMKSHF 104
>gi|300681317|emb|CAZ96031.1| arginine/serine-rich splicing factor [Sorghum bicolor]
Length = 324
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 80/183 (43%), Gaps = 27/183 (14%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R ++ GNL D+R EVE LF KYGR+ ++LK R + FV E+ RDAEDAI D
Sbjct: 26 RPVFCGNLDYDVRISEVERLFGKYGRVERVDLKTVERSGGFAFVYMEDERDAEDAIHRLD 85
Query: 67 GYNF--DGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
G +F G R+RVE + DR G G A R ++
Sbjct: 86 GIDFGRKGRRIRVEW---------TKEDRTAGRRGSSRRSPTQA------------RPTK 124
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDD 184
++ P + +DL+ H K G V + ++ + V + ED A+ +
Sbjct: 125 TLFVINFDPINTRIRDLERHFDKYGRVANVRIKKN----FAFVQFEVQEDATRALEGTNG 180
Query: 185 TEF 187
+ F
Sbjct: 181 SHF 183
>gi|307206112|gb|EFN84192.1| Splicing factor, arginine/serine-rich 7 [Harpegnathos saltator]
Length = 127
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG+L S+ + E+ED F YG + ++ + PP + FVEFE+ RDAEDA+RG DG
Sbjct: 10 VYVGDLGSNASKQELEDAFSYYGSLRNV--WVARHPPGFAFVEFEDPRDAEDAVRGLDGR 67
Query: 69 NFDGCRLRVELAHG 82
G R RVEL++G
Sbjct: 68 TICGRRARVELSNG 81
>gi|226472060|emb|CAX77068.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472062|emb|CAX77069.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472064|emb|CAX77070.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472066|emb|CAX77071.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472072|emb|CAX77074.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
Length = 155
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G+LP + E E+E +F +YGR+ ++ + PP + FVEFE+A DA DA+R DG
Sbjct: 12 VYIGDLPREASERELERIFREYGRLRNV--WVARNPPGFAFVEFEDAADASDAVRELDGT 69
Query: 69 NFDGCRLRVELAHGGSGRGP 88
G R RVEL+ G S + P
Sbjct: 70 VMCGVRARVELSTGKSRQKP 89
>gi|170033187|ref|XP_001844460.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167873739|gb|EDS37122.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 159
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL S ++E+E F KYG + ++ + PP + FVEFE+ RDAEDA R DG
Sbjct: 13 VYVGNLGSSASKHEIESAFGKYGPLRNVW--VARNPPGFAFVEFEDKRDAEDACRSLDGQ 70
Query: 69 NFDGCRLRVELAHG 82
G R+RVE++ G
Sbjct: 71 RCCGTRIRVEMSSG 84
>gi|24641772|ref|NP_572880.2| Rbp1-like, isoform A [Drosophila melanogaster]
gi|21064531|gb|AAM29495.1| RE47308p [Drosophila melanogaster]
gi|22832194|gb|AAF48264.2| Rbp1-like, isoform A [Drosophila melanogaster]
gi|220948574|gb|ACL86830.1| Rbp1-like-PA [synthetic construct]
gi|220957848|gb|ACL91467.1| Rbp1-like-PA [synthetic construct]
Length = 158
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL S +YE+E+ F KYG + ++ + PP + FVEFE+ RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 NFDGCRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|198471193|ref|XP_001355529.2| GA15173 [Drosophila pseudoobscura pseudoobscura]
gi|198145808|gb|EAL32588.2| GA15173 [Drosophila pseudoobscura pseudoobscura]
Length = 161
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL S +YE+E+ F KYG + ++ + PP + FVEFE+ RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 NFDGCRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|195478268|ref|XP_002100463.1| GE16161 [Drosophila yakuba]
gi|194187987|gb|EDX01571.1| GE16161 [Drosophila yakuba]
Length = 160
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL S +YE+E+ F KYG + ++ + PP + FVEFE+ RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 NFDGCRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|195129938|ref|XP_002009411.1| GI15337 [Drosophila mojavensis]
gi|193907861|gb|EDW06728.1| GI15337 [Drosophila mojavensis]
Length = 151
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL S +YE+E+ F KYG + ++ + PP + FVEFE+ RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 NFDGCRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|195045313|ref|XP_001991952.1| GH24472 [Drosophila grimshawi]
gi|193892793|gb|EDV91659.1| GH24472 [Drosophila grimshawi]
Length = 163
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL S +YE+E+ F KYG + ++ + PP + FVEFE+ RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 NFDGCRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|194895540|ref|XP_001978277.1| GG19507 [Drosophila erecta]
gi|190649926|gb|EDV47204.1| GG19507 [Drosophila erecta]
Length = 159
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL S +YE+E+ F KYG + ++ + PP + FVEFE+ RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 NFDGCRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|300681351|emb|CAZ96098.1| arginine/serine-rich splicing factor [Saccharum hybrid cultivar
R570]
Length = 315
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 79/183 (43%), Gaps = 27/183 (14%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R ++ GNL D+R EVE LF KYGR+ ++LK R + FV E+ RDAEDAI D
Sbjct: 26 RPVFCGNLDYDVRISEVERLFGKYGRVERVDLKTVERSGGFAFVYMEDERDAEDAIHRLD 85
Query: 67 GYNF--DGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
G +F G R+RVE G S RR +R ++
Sbjct: 86 GIDFGRKGRRIRVEWTKEDRTVGRRGSSRRSPTN---------------------ARPTK 124
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDD 184
++ P + +DL+ H K G V + ++ + V + ED A+ +
Sbjct: 125 TLFVINFDPINTRIRDLERHFDKYGRVANVRIKKN----FAFVQFEVQEDATRALEGTNG 180
Query: 185 TEF 187
+ F
Sbjct: 181 SHF 183
>gi|158285865|ref|XP_001687957.1| AGAP007325-PB [Anopheles gambiae str. PEST]
gi|157020194|gb|EDO64606.1| AGAP007325-PB [Anopheles gambiae str. PEST]
Length = 124
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL S ++E+E F KYG + ++ + PP + FVEFE+ RDAEDA+R DG
Sbjct: 13 VYVGNLGSSASKHEIESAFGKYGPLRNV--WVARNPPGFAFVEFEDKRDAEDAVRSLDGT 70
Query: 69 NFDGCRLRVELAHG 82
G R+RVE++ G
Sbjct: 71 RCCGTRIRVEMSSG 84
>gi|118778182|ref|XP_308500.3| AGAP007325-PA [Anopheles gambiae str. PEST]
gi|116132260|gb|EAA04307.3| AGAP007325-PA [Anopheles gambiae str. PEST]
Length = 132
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL S ++E+E F KYG + ++ + PP + FVEFE+ RDAEDA+R DG
Sbjct: 13 VYVGNLGSSASKHEIESAFGKYGPLRNV--WVARNPPGFAFVEFEDKRDAEDAVRSLDGT 70
Query: 69 NFDGCRLRVELAHG 82
G R+RVE++ G
Sbjct: 71 RCCGTRIRVEMSSG 84
>gi|195168745|ref|XP_002025191.1| GL26725 [Drosophila persimilis]
gi|194108636|gb|EDW30679.1| GL26725 [Drosophila persimilis]
Length = 174
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL S +YE+E+ F KYG + ++ + PP + FVEFE+ RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 NFDGCRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|225710028|gb|ACO10860.1| RNA-binding protein 1 [Caligus rogercresseyi]
Length = 148
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
++ +YVGNL + ++E+ED+F +YG++ + + PP + FVEFE+ RDAEDA +G
Sbjct: 8 YNSKVYVGNLGDNASKHEIEDVFRRYGKVRSV--WVARNPPGFAFVEFEDERDAEDAAKG 65
Query: 65 RDGYNFDGCRLRVELA 80
DG G R VE++
Sbjct: 66 LDGSRICGVRATVEMS 81
>gi|225708680|gb|ACO10186.1| RNA-binding protein 1 [Caligus rogercresseyi]
Length = 147
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
++ +YVGNL + ++E+ED+F +YG++ + + PP + FVEFE+ RDAEDA +G
Sbjct: 8 YNSKVYVGNLGDNASKHEIEDVFRRYGKVRSV--WVARNPPGFAFVEFEDERDAEDAAKG 65
Query: 65 RDGYNFDGCRLRVELA 80
DG G R VE++
Sbjct: 66 LDGSRICGVRATVEMS 81
>gi|449432024|ref|XP_004133800.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like
[Cucumis sativus]
gi|449477961|ref|XP_004155176.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like
[Cucumis sativus]
Length = 253
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 50/82 (60%), Gaps = 7/82 (8%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R I+VGN D R+ E+E LF KYGR+ I++K + FV FE+ RDAEDAIRG D
Sbjct: 2 RPIFVGNFGYDTRQSELERLFSKYGRVERIDMK-----SGFAFVYFEDERDAEDAIRGLD 56
Query: 67 G--YNFDGCRLRVELAHGGSGR 86
+ +D RL VE A G GR
Sbjct: 57 NLPFGYDRRRLSVEWARGERGR 78
>gi|345486250|ref|XP_003425431.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Nasonia
vitripennis]
gi|345486252|ref|XP_003425432.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Nasonia
vitripennis]
Length = 163
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL S ++E+E F KYG + ++ + PP + FVEFE+ RDAEDA+RG
Sbjct: 10 LSCKVYVGNLGSSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRG 67
Query: 65 RDGYNFDGCRLRVEL 79
DG G R+RVE+
Sbjct: 68 LDGTRCCGTRVRVEM 82
>gi|387196982|gb|AFJ68787.1| rnp domain-containing protein [Nannochloropsis gaditana CCMP526]
Length = 193
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEG---TYGVVDYTNPEDMKYAIRKL 182
RV V L +WQDLKDHMRK G+V A+V D EG G+V+Y NP AIR+L
Sbjct: 7 RVYVGNLSYEVAWQDLKDHMRKVGNVVHADVLEDHEGRSKGCGIVEYDNPHGAMRAIREL 66
Query: 183 DDTEFRNPWARGRITVKRYDRSPSR 207
++T+ +GR+ R DR +
Sbjct: 67 NNTDL-----KGRLIFVREDREDKK 86
>gi|440794423|gb|ELR15584.1| hypothetical protein ACA1_164640 [Acanthamoeba castellanii str.
Neff]
Length = 212
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEG---TYGVVDYTNPEDMKYAIRKL 182
RV V LP SWQDLKDHMRKAG+V A+V D G G+V+Y+ PE+ + AI+ L
Sbjct: 26 RVYVGNLPWQTSWQDLKDHMRKAGNVTRADVFIDETGRSKGCGIVEYSTPEEAQNAIKTL 85
Query: 183 DDTEF 187
+DT+
Sbjct: 86 NDTKL 90
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 78/187 (41%), Gaps = 19/187 (10%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRIL--DIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+YVGNLP +++D K G + D+ + R VE+ +A++AI+ +
Sbjct: 27 VYVGNLPWQTSWQDLKDHMRKAGNVTRADVFIDETGRSKGCGIVEYSTPEEAQNAIKTLN 86
Query: 67 GYNFDGC-RLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
D RL + G S A + I
Sbjct: 87 DTKLDETERLIFSCPAAAAVWGEVWS-------------VEAVEAVEASTLTLILTLILI 133
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEG---TYGVVDYTNPEDMKYAIRKL 182
V + LP + SWQDLKD R+AG++ A+V D+ G G V + +P D + AIR
Sbjct: 134 LVFIGNLPYTTSWQDLKDRFRQAGNIIRADVLLDTTGRSKGQGTVLFESPGDAQKAIRMF 193
Query: 183 DDTEFRN 189
D+T+F+
Sbjct: 194 DNTDFQQ 200
>gi|442626458|ref|NP_001260168.1| x16, isoform B [Drosophila melanogaster]
gi|440213469|gb|AGB92704.1| x16, isoform B [Drosophila melanogaster]
Length = 257
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R +YVG+L ++ R+ ++E +F YG + + I PP + FVEFE+ARDA DA+RG D
Sbjct: 8 RKVYVGDLGNNARKNDLEYVFGAYGSLRSVW--IARNPPGFAFVEFESARDAADAVRGLD 65
Query: 67 GYNFDGCRLRVELAHG 82
G G R RVEL+ G
Sbjct: 66 GRTVCGRRARVELSTG 81
>gi|148298845|ref|NP_001091768.1| arginine/serine-rich splicing factor 7 [Bombyx mori]
gi|95103084|gb|ABF51483.1| arginine/serine-rich splicing factor 7 [Bombyx mori]
gi|102269217|gb|ABF55972.2| xl6 [Bombyx mori]
Length = 176
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG+L ++ + E+ED F YG + ++ + PP + FVEFE+ RDAEDA+RG DG
Sbjct: 9 VYVGDLGNNASKPELEDAFSYYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGLDGR 66
Query: 69 NFDGCRLRVELAHGGSGRG 87
G R RVE+++GG G G
Sbjct: 67 TICGRRARVEMSNGGRGYG 85
>gi|145346370|ref|XP_001417662.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577890|gb|ABO95955.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 129
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 72/148 (48%), Gaps = 22/148 (14%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R +YVGNLP D +V+ F +G + +E+K P PP + FV F++ARDAE A R D
Sbjct: 1 RAVYVGNLPLDASSRDVDRRFAAHGVVARVEVKRPRHPPAFAFVTFDDARDAERAARAED 60
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G FDG RGP R GA A + +R +E+
Sbjct: 61 GTTFDG------------RRGPYDRPR----------WRDGADARSMVRERAATRKTEHS 98
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFA 154
V V LP A W+D+KD R+AG V +A
Sbjct: 99 VKVEDLPRGADWRDVKDAFRRAGRVTYA 126
>gi|198422993|ref|XP_002121806.1| PREDICTED: zinc finger (CCHC)-24 isoform 1 [Ciona intestinalis]
Length = 230
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNL S ++E F YGR++++ + PP + +VEFE+ RDA+DAI+G DG
Sbjct: 7 IYVGNLSSSTTRGDLEYEFEYYGRLINV--WVAKSPPGFAYVEFEDPRDADDAIKGLDGK 64
Query: 69 NFDGCRLRVELAHG 82
G R+RVE +HG
Sbjct: 65 ELHGRRIRVERSHG 78
>gi|345310699|ref|XP_001520239.2| PREDICTED: hypothetical protein LOC100091342 [Ornithorhynchus
anatinus]
Length = 334
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 112 AGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTN 171
G ++G +EYR+IV L S SWQDLKD MR+AG+V +A+ ++ GV+++ +
Sbjct: 16 TGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNE-GVIEFRS 74
Query: 172 PEDMKYAIRKLDDTEF 187
DMK A+ KLD TE
Sbjct: 75 YSDMKRALDKLDGTEI 90
>gi|393213816|gb|EJC99311.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 258
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 84/189 (44%), Gaps = 10/189 (5%)
Query: 3 GRFSRT-IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPP--RPPCYCFVEFENARDAE 59
G+ +RT ++ GNLP +R +++DLF + G +L ++ + P R Y V +A DA
Sbjct: 66 GKDTRTQLFAGNLPYRVRWQDLKDLFRRAGTVLRADVSLSPDNRSRGYGTVLLASAEDAG 125
Query: 60 DAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGI 119
A+ +GYN+ G L V L G+ G G G G
Sbjct: 126 RAVDMFNGYNWQGRVLEVRLDRLGAVPGADMDANPAAIIPGAP--LPGLPIGVNINGLNA 183
Query: 120 SRHSEYRVIVRG--LPSSASWQDLKDHMRKAGDVCFAEVSRDSEG---TYGVVDYTNPED 174
S V + G LP WQDLKD R+AG + A+VS +G +G V Y N D
Sbjct: 184 SLGGIASVALNGVHLPFHCQWQDLKDLFRQAGTILRADVSLGPDGRSRGFGTVTYANEID 243
Query: 175 MKYAIRKLD 183
+ A+ +
Sbjct: 244 AERAVAMFN 252
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 8/92 (8%)
Query: 115 GRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEG---TYGVVDYTN 171
GR + + ++ LP WQDLKD R+AG V A+VS + YG V +
Sbjct: 61 GRPPPGKDTRTQLFAGNLPYRVRWQDLKDLFRRAGTVLRADVSLSPDNRSRGYGTVLLAS 120
Query: 172 PEDMKYAIRKLDDTEFRNPWARGRITVKRYDR 203
ED A+ + + +GR+ R DR
Sbjct: 121 AEDAGRAVDMFNGYNW-----QGRVLEVRLDR 147
>gi|383852334|ref|XP_003701683.1| PREDICTED: uncharacterized protein LOC100878663 [Megachile
rotundata]
Length = 263
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL + ++E+E F KYG + ++ + PP + FVEFE++RDAEDA+RG
Sbjct: 9 LSCKVYVGNLGNSASKHEIETAFSKYGPLRNV--WVARNPPGFAFVEFEDSRDAEDAVRG 66
Query: 65 RDGYNFDGCRLRVEL 79
DG G R+RVE+
Sbjct: 67 LDGTRCCGTRVRVEM 81
>gi|195107293|ref|XP_001998248.1| GI23736 [Drosophila mojavensis]
gi|193914842|gb|EDW13709.1| GI23736 [Drosophila mojavensis]
Length = 137
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL S +YE+E+ F KYG + ++ I PP + FVEFE+ RDAEDA R DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLKNV--WIARNPPGFAFVEFEDRRDAEDATRALDGT 70
Query: 69 NFDGCRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|24582360|ref|NP_723226.1| x16, isoform A [Drosophila melanogaster]
gi|7243686|gb|AAF43414.1|AF232774_1 SR family splicing factor 9G8 [Drosophila melanogaster]
gi|6433840|emb|CAB60724.1| DXl6 protein [Drosophila melanogaster]
gi|7297188|gb|AAF52454.1| x16, isoform A [Drosophila melanogaster]
gi|20152051|gb|AAM11385.1| LD46359p [Drosophila melanogaster]
gi|220946366|gb|ACL85726.1| xl6-PA [synthetic construct]
gi|220956098|gb|ACL90592.1| xl6-PA [synthetic construct]
Length = 258
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R +YVG+L ++ R+ ++E +F YG + + I PP + FVEFE+ARDA DA+RG D
Sbjct: 8 RKVYVGDLGNNARKNDLEYVFGAYGSLRSV--WIARNPPGFAFVEFESARDAADAVRGLD 65
Query: 67 GYNFDGCRLRVELAHG 82
G G R RVEL+ G
Sbjct: 66 GRTVCGRRARVELSTG 81
>gi|313233455|emb|CBY24570.1| unnamed protein product [Oikopleura dioica]
Length = 583
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 77/160 (48%), Gaps = 16/160 (10%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
++++GNL R ++E F YG + DI LK Y FV+F++ DA+DA++ D
Sbjct: 412 HSVFIGNLSDHARHEDIEKFFKGYGSLRDISLK-----GGYGFVQFKDKYDAKDAVQDLD 466
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGR---------- 116
G G ++R+EL++GG R D + + + + + R
Sbjct: 467 GKEICGQKVRIELSNGGRDRTRRGRDSYSRSRSRSRDNSRYSRSTSKSPRRSFYERTAYR 526
Query: 117 -FGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAE 155
+G + ++Y + + L SWQDLKD R+ G+V + E
Sbjct: 527 KYGAPKKTKYAIEIENLSERVSWQDLKDFFRRVGEVSYGE 566
>gi|194901400|ref|XP_001980240.1| GG19772 [Drosophila erecta]
gi|195500858|ref|XP_002097554.1| GE26284 [Drosophila yakuba]
gi|190651943|gb|EDV49198.1| GG19772 [Drosophila erecta]
gi|194183655|gb|EDW97266.1| GE26284 [Drosophila yakuba]
Length = 135
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 73/133 (54%), Gaps = 7/133 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A G + RG S+ DR GG GG GG + R+G +EYR+I
Sbjct: 61 ELLGERVVVEPARG-TARG-SNRDRYDDRYGGRRGGGGGRYNDKSSSRYGPPLRTEYRLI 118
Query: 129 VRGLPSSASWQDL 141
V L S SWQ L
Sbjct: 119 VENLSSRVSWQSL 131
>gi|326431779|gb|EGD77349.1| Rsf1 [Salpingoeca sp. ATCC 50818]
Length = 89
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M+GR +YVG LP D + E+E F K+GR+ D+ + +PP + F+EFEN DA D
Sbjct: 1 MAGRMR--VYVGGLPDDADKRELEAEFSKFGRLQDV--WVARKPPGFAFIEFENDMDARD 56
Query: 61 AIRGRDGYNFDGCRLRVELA 80
A+R DG G R+RVE+A
Sbjct: 57 AVRELDGRELCGNRVRVEIA 76
>gi|224138530|ref|XP_002322837.1| predicted protein [Populus trichocarpa]
gi|222867467|gb|EEF04598.1| predicted protein [Populus trichocarpa]
Length = 179
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 67/133 (50%), Gaps = 19/133 (14%)
Query: 6 SRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGR 65
S +YVG+L + R ++E LF KYGR+ D+++K Y FVEF + RDA+DA
Sbjct: 10 STRLYVGHLAARTRSRDLEHLFSKYGRVRDVDMKRD-----YAFVEFSDPRDADDARHYL 64
Query: 66 DGYNFDGCRLRVELAHG---GS----GRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFG 118
DG +FDG R+ VE A G GS GRGP G G G G A + G
Sbjct: 65 DGKDFDGSRIIVEFAKGVPRGSREYLGRGPPP-------GSGRCFNCGIDGHWARDCKAG 117
Query: 119 ISRHSEYRVIVRG 131
++ YR RG
Sbjct: 118 DWKNKCYRCGERG 130
>gi|340711199|ref|XP_003394166.1| PREDICTED: RNA-binding protein 1-like [Bombus terrestris]
Length = 161
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 6 SRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGR 65
S +YVGNL + ++E+E F KYG + ++ + +PP + FVEFE+ RDAEDA+RG
Sbjct: 10 SCKVYVGNLGNSASKHEIESAFSKYGPLRNV--WVARKPPGFAFVEFEDPRDAEDAVRGL 67
Query: 66 DGYNFDGCRLRVEL 79
DG G R+RVE+
Sbjct: 68 DGTRCCGTRVRVEM 81
>gi|198422995|ref|XP_002122454.1| PREDICTED: zinc finger (CCHC)-24 isoform 2 [Ciona intestinalis]
Length = 205
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNL S ++E F YGR++++ + PP + +VEFE+ RDA+DAI+G DG
Sbjct: 7 IYVGNLSSSTTRGDLEYEFEYYGRLINV--WVAKSPPGFAYVEFEDPRDADDAIKGLDGK 64
Query: 69 NFDGCRLRVELAHG 82
G R+RVE +HG
Sbjct: 65 ELHGRRIRVERSHG 78
>gi|307212780|gb|EFN88451.1| RNA-binding protein 1 [Harpegnathos saltator]
Length = 101
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL S ++E+E F K+G + ++ + PP + FVEFE+ RDAEDA+RG
Sbjct: 9 LSCKVYVGNLGSSASKHEIESAFSKFGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRG 66
Query: 65 RDGYNFDGCRLRVEL 79
DG G R+RVE+
Sbjct: 67 LDGTRCCGTRVRVEM 81
>gi|347972229|ref|XP_003436863.1| AGAP004592-PD [Anopheles gambiae str. PEST]
gi|333469347|gb|EGK97258.1| AGAP004592-PD [Anopheles gambiae str. PEST]
Length = 138
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 68/133 (51%), Gaps = 8/133 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGG--AGAGAGAGRFGISRHSEYR 126
G R+ VE A G+ RGPS R Y GG + R+G +EYR
Sbjct: 61 ELLGERVVVEPAR-GTARGPSGYRERDRYDRDRRGGRYDKYKSNSRNSSRYGPPLRTEYR 119
Query: 127 VIVRGLPSSASWQ 139
++V L + SWQ
Sbjct: 120 LVVENLSTRVSWQ 132
>gi|28571693|ref|NP_788669.1| B52, isoform D [Drosophila melanogaster]
gi|281361721|ref|NP_001163603.1| B52, isoform I [Drosophila melanogaster]
gi|195329208|ref|XP_002031303.1| GM24118 [Drosophila sechellia]
gi|195571105|ref|XP_002103544.1| GD18917 [Drosophila simulans]
gi|23171195|gb|AAN13577.1| B52, isoform D [Drosophila melanogaster]
gi|194120246|gb|EDW42289.1| GM24118 [Drosophila sechellia]
gi|194199471|gb|EDX13047.1| GD18917 [Drosophila simulans]
gi|272476965|gb|ACZ94900.1| B52, isoform I [Drosophila melanogaster]
Length = 135
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 73/133 (54%), Gaps = 7/133 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A G + RG S+ DR GG GG GG + R+G +EYR+I
Sbjct: 61 ELLGERVVVEPARG-TARG-SNRDRYDDRYGGRRGGGGGRYNEKSSSRYGPPLRTEYRLI 118
Query: 129 VRGLPSSASWQDL 141
V L S SWQ L
Sbjct: 119 VENLSSRVSWQSL 131
>gi|326931663|ref|XP_003211946.1| PREDICTED: serine/arginine-rich splicing factor 6-like [Meleagris
gallopavo]
Length = 310
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 112 AGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTN 171
+G ++G +E+R+IV L S SWQDLKD MR+AG+V +A+ ++ GV+++ +
Sbjct: 62 SGRDKYGPPVRTEHRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNE-GVIEFRS 120
Query: 172 PEDMKYAIRKLDDTEF 187
DMK A+ KLD TE
Sbjct: 121 YSDMKRALDKLDGTEI 136
>gi|432102741|gb|ELK30220.1| Serine/arginine-rich splicing factor 6 [Myotis davidii]
Length = 306
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 112 AGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTN 171
+G ++G +E+R+IV L S SWQDLKD MR+AG+V +A+ ++ GV+++ +
Sbjct: 58 SGRDKYGPPVRTEFRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNE-GVIEFRS 116
Query: 172 PEDMKYAIRKLDDTEF 187
DMK A+ KLD TE
Sbjct: 117 YSDMKRALDKLDGTEI 132
>gi|242014601|ref|XP_002427975.1| RNA-binding protein, putative [Pediculus humanus corporis]
gi|212512474|gb|EEB15237.1| RNA-binding protein, putative [Pediculus humanus corporis]
Length = 106
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL S+ ++E+E F KYG + ++ + PP + FVEFE+ RDAED++RG
Sbjct: 9 LSCKVYVGNLGSNASKHEIEAAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDSVRG 66
Query: 65 RDGYNFDGCRLRVEL 79
DG G R+RVE+
Sbjct: 67 LDGTRCCGTRIRVEM 81
>gi|194742457|ref|XP_001953719.1| GF17902 [Drosophila ananassae]
gi|190626756|gb|EDV42280.1| GF17902 [Drosophila ananassae]
Length = 163
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL S +YE+E+ F KYG + ++ + PP + FVEFE+ RDAEDA R DG
Sbjct: 13 VYVGNLGSSASKYEIENAFAKYGPLRNVW--VARNPPGFAFVEFEDRRDAEDATRALDGT 70
Query: 69 NFDGCRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|357129728|ref|XP_003566513.1| PREDICTED: uncharacterized protein LOC100839501 [Brachypodium
distachyon]
Length = 292
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L + R +VE LF +YGR+ ++ELK Y FVEF + RDA+DA DG
Sbjct: 41 LYVGRLSTRTRTQDVEYLFGRYGRVRNVELKHD-----YGFVEFSDPRDADDARYELDGR 95
Query: 69 NFDGCRLRVELAHGGSGRGPSSS 91
+FDG R+ VE A G+ RGP S
Sbjct: 96 DFDGSRIIVEFAK-GTPRGPGGS 117
>gi|242247509|ref|NP_001156211.1| serine/arginine-rich splicing factor 3-like [Acyrthosiphon pisum]
gi|239790491|dbj|BAH71803.1| ACYPI006320 [Acyrthosiphon pisum]
Length = 152
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+GNL + ++E+E F KYG + + I PP + FVEFE+ RDAEDA+RG DG
Sbjct: 12 VYIGNLGQNGTKHEIEASFTKYGPLKNT--WIARNPPGFAFVEFEDPRDAEDAVRGLDGT 69
Query: 69 NFDGCRLRVELA 80
G R+RVE++
Sbjct: 70 RICGVRVRVEMS 81
>gi|357145457|ref|XP_003573649.1| PREDICTED: arginine/serine-rich-splicing factor RSP40-like
[Brachypodium distachyon]
Length = 277
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 98/229 (42%), Gaps = 55/229 (24%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R I+ GNL D R+ E+E LF KYGR+ +++K + FV E+ RDAEDAI D
Sbjct: 2 RPIFCGNLDYDARQSEIERLFSKYGRVERVDIKT-----GFAFVYMEDERDAEDAIHRLD 56
Query: 67 GYNF--DGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
+F G RLRVE + DR GG G + ++
Sbjct: 57 RTDFGRKGRRLRVEW---------TKEDRSGGRKGNPKRSPTSV------------KPTK 95
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPED---------- 174
++ P S +DL+ H + G + + R+ + V Y + ED
Sbjct: 96 TLFVINFDPISTRTRDLEKHFDQYGKIANIRIRRN----FAFVQYESQEDATKALDGTNG 151
Query: 175 ---------MKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRS 214
++YA+R DD E RN ++ R + DRSP R +R RS
Sbjct: 152 STLMDRVISVEYALR--DDDEKRNGYSPERRGGR--DRSPDRRDNRGRS 196
Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 21/106 (19%)
Query: 6 SRTIYVGNL-PSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
++T++V N P R ++E F +YG+I +I ++ + FV++E+ DA A+ G
Sbjct: 94 TKTLFVINFDPISTRTRDLEKHFDQYGKIANIRIRR-----NFAFVQYESQEDATKALDG 148
Query: 65 RDGYNFDGCRLRVELA---------------HGGSGRGPSSSDRRG 95
+G + VE A GG R P D RG
Sbjct: 149 TNGSTLMDRVISVEYALRDDDEKRNGYSPERRGGRDRSPDRRDNRG 194
>gi|328793355|ref|XP_001123058.2| PREDICTED: RNA-binding protein 1-like [Apis mellifera]
Length = 150
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL + ++E+E F KYG + ++ + PP + FVEFE+ RDAEDA+RG
Sbjct: 13 LSCKVYVGNLGNSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRG 70
Query: 65 RDGYNFDGCRLRVEL 79
DG G R+RVE+
Sbjct: 71 LDGTRCCGTRVRVEM 85
>gi|299755971|ref|XP_001829009.2| hypothetical protein CC1G_01689 [Coprinopsis cinerea okayama7#130]
gi|298411464|gb|EAU92644.2| hypothetical protein CC1G_01689 [Coprinopsis cinerea okayama7#130]
Length = 439
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 52/76 (68%), Gaps = 7/76 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAI-RGRDG 67
+Y+G LP R+ ++++ F K G+I++IELK+ Y FVEFEN AE+++ + +G
Sbjct: 87 VYIGGLPEHTRQEDLQNCFGKIGKIVNIELKV-----GYGFVEFENREAAEESVEKYHEG 141
Query: 68 YNFDGCRLRVELAHGG 83
Y F G ++RVEL+HGG
Sbjct: 142 Y-FMGQKIRVELSHGG 156
>gi|224068024|ref|XP_002302651.1| predicted protein [Populus trichocarpa]
gi|222844377|gb|EEE81924.1| predicted protein [Populus trichocarpa]
Length = 236
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 40/180 (22%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
+R ++VGN + R+ ++E LF KYGR+ +++K + FV FE+ RDA DA+RG
Sbjct: 1 MARPVFVGNFEHETRQSDLERLFSKYGRVERVDMK-----SGFAFVYFEDDRDAADAVRG 55
Query: 65 RDG--YNFDGCRLRVELAHGGSGR---GPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGI 119
D + +D RL VE A G GR GP S+
Sbjct: 56 LDNIPFGYDRRRLSVEWARGERGRHRDGPRST--------------------------AN 89
Query: 120 SRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAI 179
R ++ ++ P +D+K H + G+V + R+ + V + ED A+
Sbjct: 90 QRPTKTLFVINFDPIHTRVEDIKRHFERYGEVLHVRIRRN----FAFVQFETQEDATKAL 145
>gi|350405857|ref|XP_003487573.1| PREDICTED: RNA-binding protein 1-like [Bombus impatiens]
Length = 162
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 6 SRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGR 65
S +YVGNL + ++E+E F KYG + ++ + +PP + FVEFE+ RDAEDA+RG
Sbjct: 10 SCKVYVGNLGNSASKHEIESAFSKYGPLRNV--WVARKPPGFAFVEFEDPRDAEDAVRGL 67
Query: 66 DGYNFDGCRLRVEL 79
DG G R+RVE+
Sbjct: 68 DGTRCCGTRVRVEM 81
>gi|115434616|ref|NP_001042066.1| Os01g0155600 [Oryza sativa Japonica Group]
gi|54290784|dbj|BAD61423.1| putative splicing factor [Oryza sativa Japonica Group]
gi|113531597|dbj|BAF03980.1| Os01g0155600 [Oryza sativa Japonica Group]
gi|125524487|gb|EAY72601.1| hypothetical protein OsI_00466 [Oryza sativa Indica Group]
gi|215765664|dbj|BAG87361.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 324
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 5/74 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L S R ++EDLF +YGR+ +++K + FVEF +ARDA++A DG
Sbjct: 20 LYVGRLSSRTRTRDLEDLFGRYGRVRYVDMKHE-----FAFVEFSDARDADEARYNLDGR 74
Query: 69 NFDGCRLRVELAHG 82
+FDG R+ VE A G
Sbjct: 75 DFDGSRMIVEFAKG 88
>gi|195401867|ref|XP_002059532.1| GJ14774 [Drosophila virilis]
gi|194147239|gb|EDW62954.1| GJ14774 [Drosophila virilis]
Length = 155
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL S ++E+E+ F KYG + ++ + PP + FVEFE+ RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKHEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 NFDGCRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|255568494|ref|XP_002525221.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223535518|gb|EEF37187.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 305
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 69/136 (50%), Gaps = 20/136 (14%)
Query: 4 RFSRT-IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAI 62
R++ T +YVG+L S R ++E LF KYGR+ D+++K Y FVEF + RDA+DA
Sbjct: 7 RYANTRLYVGHLASRTRSRDLEYLFSKYGRVRDVDMKR-----DYAFVEFSDPRDADDAR 61
Query: 63 RGRDGYNFDGCRLRVELAHG---GS----GRGPSSSDRRGGYGGGGAGGAGGAGAGAGAG 115
DG + DG R+ VE A G GS GRGP G G G G A
Sbjct: 62 YHLDGKDLDGSRIIVEFAKGVPRGSREYLGRGPPP-------GSGRCFNCGIDGHWARDC 114
Query: 116 RFGISRHSEYRVIVRG 131
+ G ++ YR RG
Sbjct: 115 KAGDWKNKCYRCGERG 130
>gi|222617767|gb|EEE53899.1| hypothetical protein OsJ_00434 [Oryza sativa Japonica Group]
Length = 377
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L S R ++EDLF +YGR+ +++K + FVEF +ARDA++A DG
Sbjct: 73 LYVGRLSSRTRTRDLEDLFGRYGRVRYVDMKHE-----FAFVEFSDARDADEARYNLDGR 127
Query: 69 NFDGCRLRVELAHGGSGRGPSSS 91
+FDG R+ VE A G RGP S
Sbjct: 128 DFDGSRMIVEFAK-GVPRGPGGS 149
>gi|338719068|ref|XP_001500385.3| PREDICTED: serine/arginine-rich splicing factor 6 [Equus caballus]
Length = 164
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 112 AGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTN 171
+G ++G +E+R+IV L S SWQDLKD MR+AG+V +A+ ++ GV+++ +
Sbjct: 14 SGRDKYGPPVRTEFRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNE-GVIEFRS 72
Query: 172 PEDMKYAIRKLDDTEF 187
DMK A+ KLD TE
Sbjct: 73 YSDMKRALDKLDGTEI 88
>gi|93003218|tpd|FAA00192.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 238
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNL S ++E F YGR++++ + PP + +VEFE+ RDA+DAI+G DG
Sbjct: 15 IYVGNLSSSTTRGDLEYEFEYYGRLINVW--VAKSPPGFAYVEFEDPRDADDAIKGLDGK 72
Query: 69 NFDGCRLRVELAHG 82
G R+RVE +HG
Sbjct: 73 ELHGRRIRVERSHG 86
>gi|28629815|gb|AAO45173.1| splicing factor arginine/serine-rich 3 [Paralichthys olivaceus]
Length = 168
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 16 VYVGNLGNNGNKTELERAFGYYGPLRSVW--VARNPPGFAFVEFEDPRDASDAVRELDGR 73
Query: 69 NFDGCRLRVELAHGGS---GRGPSSS 91
N GC+LRVEL+ G RGP S
Sbjct: 74 NMCGCKLRVELSTGEKRSRSRGPPPS 99
>gi|156086400|ref|XP_001610609.1| splicing factor, arginine/serine-rich 3 [Babesia bovis T2Bo]
gi|154797862|gb|EDO07041.1| splicing factor, arginine/serine-rich 3, putative [Babesia bovis]
Length = 140
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 1 MSGRFSRT----IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENAR 56
M RF T +Y+GNL + +VE LF K+G I +I + RPP + FV FE+ R
Sbjct: 1 MGSRFESTEGRKVYIGNLNPEATVEDVESLFSKFGTIGNI--WVARRPPGFAFVTFEDPR 58
Query: 57 DAEDAIRGRDGYNFDGCRLRVELAHG 82
DA DAI DG + G L+VEL+ G
Sbjct: 59 DATDAIEELDGSEYKGQNLKVELSKG 84
>gi|380023824|ref|XP_003695711.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Apis
florea]
Length = 166
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL + ++E+E F KYG + ++ + PP + FVEFE+ RDAEDA+RG
Sbjct: 13 LSCKVYVGNLGNSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRG 70
Query: 65 RDGYNFDGCRLRVEL 79
DG G R+RVE+
Sbjct: 71 LDGTRCCGTRVRVEM 85
>gi|294653211|gb|ADF28513.1| rbp1-like RNA-binding protein PB [Pelinobius muticus]
Length = 134
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+GNL S + ++E +F +YG I ++ + PP + FVEFE++RDAEDA++ DG
Sbjct: 13 VYIGNLGSRATKDDIEAVFSRYGPIRNV--WVARNPPGFAFVEFEDSRDAEDAVKALDGT 70
Query: 69 NFDGCRLRVELAH 81
G R+RVE++H
Sbjct: 71 RICGARVRVEMSH 83
>gi|289740745|gb|ADD19120.1| alternative splicing factor SRP20/9G8 [Glossina morsitans
morsitans]
Length = 145
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL S +YE+E+ F KYG + ++ + PP + FVEF++ RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFDDRRDAEDATRGLDGT 70
Query: 69 NFDGCRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|391331353|ref|XP_003740112.1| PREDICTED: uncharacterized protein LOC100903643 [Metaseiulus
occidentalis]
Length = 162
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+GNL + +++E F KYG + ++ + PP + FVEFE++RDAEDA+R DG
Sbjct: 12 VYIGNLANHTSRHDIESAFGKYGNLRNV--WVARNPPGFAFVEFEDSRDAEDAVRALDGS 69
Query: 69 NFDGCRLRVELAH 81
G R++ E++H
Sbjct: 70 RICGSRVKCEMSH 82
>gi|380012958|ref|XP_003690539.1| PREDICTED: uncharacterized protein LOC100863202 [Apis florea]
Length = 193
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL + ++E+E F KYG + ++ + PP + FVEFE+ RDAEDA+RG
Sbjct: 40 LSCKVYVGNLGNSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRG 97
Query: 65 RDGYNFDGCRLRVEL 79
DG G R+RVE+
Sbjct: 98 LDGTRCCGTRVRVEM 112
>gi|224130604|ref|XP_002320882.1| predicted protein [Populus trichocarpa]
gi|222861655|gb|EEE99197.1| predicted protein [Populus trichocarpa]
Length = 236
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 81/182 (44%), Gaps = 31/182 (17%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R I+VGN + R+ E+E LF KYGR+ +++K + FV FE+ RDA DAIRG D
Sbjct: 1 RPIFVGNFEQETRQSELERLFRKYGRVERVDMK-----SGFAFVYFEDDRDAADAIRGLD 55
Query: 67 G--YNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
+ +D RL VE A +G RG + G R ++
Sbjct: 56 NIPFGYDRRRLSVEWARVYAG-------ERGRHRDGPRSTVN-------------QRPTK 95
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDD 184
++ P +D+K H + G+V + R+ + V + ED A+++
Sbjct: 96 TLFVINFDPIHTRVEDIKRHFERYGEVLHVRIRRN----FAFVQFETQEDATKALQRTHM 151
Query: 185 TE 186
T+
Sbjct: 152 TK 153
>gi|219130905|ref|XP_002185593.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217402933|gb|EEC42891.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 222
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 13/195 (6%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIE--LKIPPRPPCYCFVEFENARDAEDAI 62
F+R +YVGNL + ++D + G ++ E ++ R VE+ +A++AI
Sbjct: 17 FNRRVYVGNLSWSVAWQSLKDHMRQAGEVVHAEVIMEYNGRSKGCGIVEYATDEEAQEAI 76
Query: 63 RGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGA------GAGAGAGR 116
+ +G + V +G S G+ G G G G G G GR
Sbjct: 77 KTLTDTELNGRMIFVREDRETPNQGASYQGESRGWIGSWRGRGRGGRGISSYGGGRGIGR 136
Query: 117 FGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGT---YGVVDYTNPE 173
+ +E ++ V L S +W++LKDH R+ GD+ AEV G +G V +
Sbjct: 137 LNVD--AETQLFVGNLAQSTTWRELKDHFRQCGDIQRAEVKNGPAGQSKGFGTVQFLKKS 194
Query: 174 DMKYAIRKLDDTEFR 188
D K AI +L+ +E +
Sbjct: 195 DAKDAITQLNGSELQ 209
>gi|255564609|ref|XP_002523299.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223537387|gb|EEF39015.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 259
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 77/176 (43%), Gaps = 34/176 (19%)
Query: 6 SRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGR 65
+R I+VGN + R+ E+E LF KYGR+ +++K + FV FE+ RDA DAIRG
Sbjct: 2 ARPIFVGNFEFETRQSELERLFSKYGRVERVDMK-----SGFAFVYFEDERDAADAIRGL 56
Query: 66 DGYNF--DGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHS 123
D +F D +L VE A G GR G+ R +
Sbjct: 57 DNISFGYDRRKLSVEWARGERGRHRD-----------------------GSRSMANQRPT 93
Query: 124 EYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAI 179
+ ++ P +D+K H + G+V + R+ + V + ED A+
Sbjct: 94 KTLFVINFDPIHTRVEDIKRHFERYGEVLHVRIRRN----FAFVQFETQEDATKAL 145
>gi|380012960|ref|XP_003690540.1| PREDICTED: uncharacterized protein LOC100863202 [Apis florea]
Length = 191
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL + ++E+E F KYG + ++ + PP + FVEFE+ RDAEDA+RG
Sbjct: 40 LSCKVYVGNLGNSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRG 97
Query: 65 RDGYNFDGCRLRVEL 79
DG G R+RVE+
Sbjct: 98 LDGTRCCGTRVRVEM 112
>gi|224088597|ref|XP_002308490.1| predicted protein [Populus trichocarpa]
gi|222854466|gb|EEE92013.1| predicted protein [Populus trichocarpa]
Length = 181
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 12/87 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG+L + R ++E LF KYGR+ D+++K Y FVEF + RDA+DA DG
Sbjct: 13 LYVGHLAARTRSRDLEHLFSKYGRVRDVDMKRD-----YAFVEFSDPRDADDARHYLDGK 67
Query: 69 NFDGCRLRVELAHG---GS----GRGP 88
FDG R+ VE A G GS GRGP
Sbjct: 68 EFDGSRIIVEFAKGVPRGSREYLGRGP 94
>gi|359486310|ref|XP_002281756.2| PREDICTED: uncharacterized protein LOC100251921 [Vitis vinifera]
Length = 304
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 65/133 (48%), Gaps = 22/133 (16%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L S R ++EDLF +YGR+ D+++K + FVEF + RDA+DA +G
Sbjct: 13 LYVGRLSSRTRSRDLEDLFSRYGRVRDVDMKH-----DFAFVEFSDPRDADDARYSLNGR 67
Query: 69 NFDGCRLRVELAHGGS----------GRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFG 118
+FDG R+ VE A GG GRGP G G G G A + G
Sbjct: 68 DFDGSRIIVEFAKGGPRGPGGSREYLGRGPPP-------GSGRCFNCGIDGHWARDCKAG 120
Query: 119 ISRHSEYRVIVRG 131
++ YR RG
Sbjct: 121 DWKNKCYRCGERG 133
>gi|72026975|ref|XP_787177.1| PREDICTED: serine/arginine-rich splicing factor 7-like
[Strongylocentrotus purpuratus]
Length = 192
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNLPS E+E+ F +YGR+ ++ + PP + FV FE+ RDA DA + D
Sbjct: 18 VYVGNLPSGASRTELEEAFSRYGRVKNV--WVARNPPGFAFVMFEDERDASDACKALDDR 75
Query: 69 NFDGCRLRVELAHGGS 84
N G R+RVE++ G S
Sbjct: 76 NVCGVRVRVEMSSGES 91
>gi|221112062|ref|XP_002166415.1| PREDICTED: uncharacterized protein LOC100209098 [Hydra
magnipapillata]
Length = 257
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
I++G LP D E+E F GR+ D+ + PP + F+ FE+ RDAEDA+R DG
Sbjct: 4 IFIGGLPEDASRTELEREFECIGRLRDV--WVARNPPGFGFIIFEDPRDAEDAVREMDGK 61
Query: 69 NFDGCRLRVELAHGGSG 85
G R+RVELA +G
Sbjct: 62 KICGSRIRVELARATTG 78
>gi|347972235|ref|XP_003436866.1| AGAP004592-PB [Anopheles gambiae str. PEST]
gi|347972237|ref|XP_003436867.1| AGAP004592-PF [Anopheles gambiae str. PEST]
gi|333469345|gb|EGK97256.1| AGAP004592-PB [Anopheles gambiae str. PEST]
gi|333469349|gb|EGK97260.1| AGAP004592-PF [Anopheles gambiae str. PEST]
Length = 149
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 68/133 (51%), Gaps = 8/133 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGA--GAGRFGISRHSEYR 126
G R+ VE A G+ RGPS R Y GG + R+G +EYR
Sbjct: 61 ELLGERVVVEPAR-GTARGPSGYRERDRYDRDRRGGRYDKYKSNSRNSSRYGPPLRTEYR 119
Query: 127 VIVRGLPSSASWQ 139
++V L + SWQ
Sbjct: 120 LVVENLSTRVSWQ 132
>gi|328777412|ref|XP_397274.4| PREDICTED: serine/arginine-rich splicing factor 7-like [Apis
mellifera]
Length = 193
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL + ++E+E F KYG + ++ + PP + FVEFE+ RDAEDA+RG
Sbjct: 40 LSCKVYVGNLGNSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRG 97
Query: 65 RDGYNFDGCRLRVEL 79
DG G R+RVE+
Sbjct: 98 LDGTRCCGTRVRVEM 112
>gi|110767678|ref|XP_001122800.1| PREDICTED: serine/arginine-rich splicing factor 7 [Apis
mellifera]
gi|380013414|ref|XP_003690755.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Apis
florea]
Length = 206
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG+L S + E+ED F YG + ++ + PP + FVEFE+ARDAEDAIRG DG
Sbjct: 13 VYVGDLGSGATKQELEDAFSYYGSLRNVW--VARNPPGFAFVEFEDARDAEDAIRGLDGR 70
Query: 69 NFDGCRLRVELAHG 82
G R RVE ++G
Sbjct: 71 TICGRRARVEPSNG 84
>gi|254582829|ref|XP_002499146.1| ZYRO0E04928p [Zygosaccharomyces rouxii]
gi|238942720|emb|CAR30891.1| ZYRO0E04928p [Zygosaccharomyces rouxii]
Length = 409
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 85/190 (44%), Gaps = 12/190 (6%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPC--YCFVEFENARDAEDAI 62
++ +++VGNL D +++D F + G ++ ++ I R VEF N D ++AI
Sbjct: 101 YANSVFVGNLTYDCAPEDLKDYFSQIGNVVRADI-ITSRGHHRGMGTVEFTNTEDVDEAI 159
Query: 63 RGRDGYNFDGCRLRVELAHG--GSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
R DG F ++ V + S +RR GA G AG G S
Sbjct: 160 RRFDGAYFMDRQIFVRQDNPPPESNSHERVQERRKERTFAGASSGSNNGTNAG----GNS 215
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGT---YGVVDYTNPEDMKY 177
Y V V LP S +WQ LKD ++ G+V A+V G +G V Y PE+M+
Sbjct: 216 NGPIYEVFVANLPYSINWQALKDMFKECGNVIRADVELARNGYSRGFGTVIYGTPEEMQD 275
Query: 178 AIRKLDDTEF 187
AI + E
Sbjct: 276 AIARFHGYEL 285
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 3 GRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPR--PPCYCFVEFENARDAED 60
G + IY NLP ++ DLF G++ + EL+ + P VE+EN DA+
Sbjct: 326 GERNNLIYCANLPFSTATSDLYDLFETIGKLNNAELRFDSKGAPTGVAIVEYENVEDADV 385
Query: 61 AIRGRDGYNFDGCRLRV 77
I + YN+ GC L +
Sbjct: 386 CIDRLNNYNYGGCDLEI 402
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 70/186 (37%), Gaps = 19/186 (10%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRIL--DIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
++V NLP I ++D+F + G ++ D+EL + V + + +DAI
Sbjct: 222 VFVANLPYSINWQALKDMFKECGNVIRADVELARNGYSRGFGTVIYGTPEEMQDAIARFH 281
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSS--DRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
GY +G L V + P D + G G
Sbjct: 282 GYELEGRILEVREGRKSAVDPPPQEPIDDSSNFNSEFTEGVTDGGERNNL---------- 331
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGT---YGVVDYTNPEDMKYAIRK 181
+ LP S + DL D G + AE+ DS+G +V+Y N ED I +
Sbjct: 332 --IYCANLPFSTATSDLYDLFETIGKLNNAELRFDSKGAPTGVAIVEYENVEDADVCIDR 389
Query: 182 LDDTEF 187
L++ +
Sbjct: 390 LNNYNY 395
>gi|28571695|ref|NP_788670.1| B52, isoform F [Drosophila melanogaster]
gi|281361723|ref|NP_001163604.1| B52, isoform K [Drosophila melanogaster]
gi|23171196|gb|AAN13578.1| B52, isoform F [Drosophila melanogaster]
gi|272476966|gb|ACZ94901.1| B52, isoform K [Drosophila melanogaster]
Length = 147
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 80/148 (54%), Gaps = 10/148 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A G + RG S+ DR GG GG GG + R+G +EYR+I
Sbjct: 61 ELLGERVVVEPARG-TARG-SNRDRYDDRYGGRRGGGGGRYNEKSSSRYGPPLRTEYRLI 118
Query: 129 VRGLPSSASWQDLKDH--MRKAGDVCFA 154
V L S SWQ + +H M +A V +
Sbjct: 119 VENLSSRVSWQ-VSEHGSMYRALGVVYT 145
>gi|403182431|gb|EJY57381.1| AAEL017082-PA [Aedes aegypti]
Length = 243
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 53/85 (62%), Gaps = 7/85 (8%)
Query: 1 MSGRFSR-----TIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENA 55
MS + SR +YVG L ++ + E+ED F YG + ++ + PP + FVEF++A
Sbjct: 1 MSKKMSRYPHDAKVYVGELGNNASKQEIEDAFSYYGPLRNVW--VARNPPGFAFVEFDDA 58
Query: 56 RDAEDAIRGRDGYNFDGCRLRVELA 80
RDAED++RG DG G R+RVEL+
Sbjct: 59 RDAEDSVRGLDGRTVCGRRVRVELS 83
>gi|320542033|ref|NP_001188585.1| Rbp1-like, isoform B [Drosophila melanogaster]
gi|318069370|gb|ADV37667.1| Rbp1-like, isoform B [Drosophila melanogaster]
Length = 247
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL S +YE+E+ F KYG + ++ + PP + FVEFE+ RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 NFDGCRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|225712646|gb|ACO12169.1| RNA-binding protein 1 [Lepeophtheirus salmonis]
Length = 142
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL + ++E+ED+F +YG++ + + PP + FVEFE+ RDAEDA + DG
Sbjct: 14 VYVGNLGDNASKHELEDVFRRYGKVRSVW--VARNPPGFAFVEFEDERDAEDASKALDGS 71
Query: 69 NFDGCRLRVELA 80
G R VE++
Sbjct: 72 RICGVRATVEMS 83
>gi|328777414|ref|XP_003249337.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Apis
mellifera]
Length = 177
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL + ++E+E F KYG + ++ + PP + FVEFE+ RDAEDA+RG
Sbjct: 40 LSCKVYVGNLGNSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRG 97
Query: 65 RDGYNFDGCRLRVEL 79
DG G R+RVE+
Sbjct: 98 LDGTRCCGTRVRVEM 112
>gi|449672696|ref|XP_004207773.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Hydra
magnipapillata]
Length = 115
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
I++G LP D E+E F +GR+ D+ + PP + F+ FE+ARDAEDA+R DG
Sbjct: 4 IFIGGLPEDASRNELEKEFESFGRLRDV--WVARNPPGFGFIIFEDARDAEDAVREMDGK 61
Query: 69 NFDGCRLRVELAHG 82
G R+RVE A G
Sbjct: 62 RVCGSRIRVEFARG 75
>gi|357134837|ref|XP_003569022.1| PREDICTED: uncharacterized protein LOC100826232 [Brachypodium
distachyon]
Length = 335
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 54/98 (55%), Gaps = 6/98 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L S R ++E LF +YGRI ++ELK Y F+E+ + RDA+DA DG
Sbjct: 13 LYVGRLSSRTRTRDLEYLFSRYGRIREVELKRD-----YAFIEYSDPRDADDAQYNLDGR 67
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAG 106
+ DG R+ VE A G RGP S R G G G G
Sbjct: 68 DVDGSRIIVEFAK-GIPRGPGGSREREYMGRGPPPGTG 104
>gi|353242017|emb|CCA73791.1| hypothetical protein PIIN_11698 [Piriformospora indica DSM 11827]
Length = 262
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 87/190 (45%), Gaps = 16/190 (8%)
Query: 5 FSRTIYVGNL-PSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIR 63
S+ +YVGN P D++ + F G I+D + F DAED +R
Sbjct: 1 MSKRLYVGNARPEDVKSF-----FGSGGAIVDCRILTGTY--------FATTHDAEDVVR 47
Query: 64 GRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHS 123
+G NF G + VE A + DR GG G G G G G G R
Sbjct: 48 NFNGKNFMGSEIIVEQAKDSRPKRGGYEDRGGGGYRGDGGHRGDRGGPGGGGG-RPPRVP 106
Query: 124 EYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLD 183
R++V G+ SWQDLKD R+AG+V FA++ RD GV++Y+ E+ AIR LD
Sbjct: 107 GIRLVVTGVSRDTSWQDLKDFARQAGNVTFADIDRDVPNQ-GVIEYSTREEADQAIRDLD 165
Query: 184 DTEFRNPWAR 193
E R R
Sbjct: 166 GKEIRGTSVR 175
>gi|209734182|gb|ACI67960.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
gi|221222340|gb|ACM09831.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
gi|303663267|gb|ADM16100.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
Length = 172
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL + + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 16 VYVGNLGNSGNKTELERAFGYYGPLRSVWVAR--NPPGFAFVEFEDPRDATDAVRELDGR 73
Query: 69 NFDGCRLRVELAHGGS---GRGPSSS 91
GCR+RVEL++G RGP S
Sbjct: 74 TLSGCRVRVELSNGEKRTRSRGPPPS 99
>gi|402586916|gb|EJW80852.1| hypothetical protein WUBG_08240, partial [Wuchereria bancrofti]
Length = 246
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 70/136 (51%), Gaps = 11/136 (8%)
Query: 51 EFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGA 110
EF++ RDA+DA+ +G G R+ +E S RGP S R G+GG +
Sbjct: 1 EFDDPRDADDAVYELNGKELCGERVILEF----SRRGPRS---RMGFGGFDRFPPPRRES 53
Query: 111 GAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYT 170
+G + + YR+IV L S SWQDLKD MR AG+V FA+ + G+V +
Sbjct: 54 RL---VYGPPQQTRYRLIVENLSSRCSWQDLKDIMRTAGEVTFADAHK-QHPNEGIVCFL 109
Query: 171 NPEDMKYAIRKLDDTE 186
+D++ A+ KL E
Sbjct: 110 TRDDLERALDKLQGKE 125
>gi|297736448|emb|CBI25319.3| unnamed protein product [Vitis vinifera]
Length = 278
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 65/133 (48%), Gaps = 22/133 (16%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L S R ++EDLF +YGR+ D+++K + FVEF + RDA+DA +G
Sbjct: 45 LYVGRLSSRTRSRDLEDLFSRYGRVRDVDMKHD-----FAFVEFSDPRDADDARYSLNGR 99
Query: 69 NFDGCRLRVELAHGGS----------GRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFG 118
+FDG R+ VE A GG GRGP G G G G A + G
Sbjct: 100 DFDGSRIIVEFAKGGPRGPGGSREYLGRGPPP-------GSGRCFNCGIDGHWARDCKAG 152
Query: 119 ISRHSEYRVIVRG 131
++ YR RG
Sbjct: 153 DWKNKCYRCGERG 165
>gi|157117871|ref|XP_001653077.1| RNA-binding protein [Aedes aegypti]
gi|108883341|gb|EAT47566.1| AAEL001356-PA [Aedes aegypti]
Length = 131
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL S ++E+E F KYG + ++ + PP + FVEFE+ RDAEDA+R DG
Sbjct: 13 VYVGNLGSSASKHEIESAFGKYGPLRNV--WVARNPPGFAFVEFEDKRDAEDAVRSLDGT 70
Query: 69 NFDGCRLRVELA 80
G R+RVE++
Sbjct: 71 RCCGTRIRVEMS 82
>gi|260819022|ref|XP_002604681.1| hypothetical protein BRAFLDRAFT_282357 [Branchiostoma floridae]
gi|229290009|gb|EEN60692.1| hypothetical protein BRAFLDRAFT_282357 [Branchiostoma floridae]
Length = 148
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 3 GRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAI 62
G + IYVGNLP ++E+E+ F +GR+ ++ + PP + +VEFE+ RDA DA+
Sbjct: 8 GPLNCKIYVGNLPPGAAKHEIEERFSDFGRLRNVWVAR--NPPGFAYVEFEDHRDARDAV 65
Query: 63 RGRDGYNFDGCRLRVELAHG 82
+ +G G R RVE +HG
Sbjct: 66 KSLNGKMICGVRSRVEFSHG 85
>gi|357132692|ref|XP_003567963.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like
[Brachypodium distachyon]
Length = 319
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 46/74 (62%), Gaps = 5/74 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L S R ++EDLF +YGR+ +++K + FVEF + RDA+DA DG
Sbjct: 16 LYVGRLSSRTRSRDLEDLFGRYGRVRYVDMKHE-----FAFVEFSDPRDADDARYNLDGR 70
Query: 69 NFDGCRLRVELAHG 82
+FDG R+ VE A G
Sbjct: 71 DFDGSRMIVEFAKG 84
>gi|389608975|dbj|BAM18099.1| hypothetical protein [Papilio xuthus]
Length = 145
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG+L ++ + E+ED F YG + ++ + PP + FVEFE+ RDAEDAIRG DG
Sbjct: 9 VYVGDLGNNASKPELEDAFSYYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAIRGLDGR 66
Query: 69 NFDGCRLRVELAHGGSGRG 87
G R RVE+++G G G
Sbjct: 67 TICGRRARVEMSNGSRGYG 85
>gi|326512990|dbj|BAK03402.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 282
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 50/83 (60%), Gaps = 6/83 (7%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG+L + R +VE LF +YGRI +ELK Y FVEF N RDA+DA DG
Sbjct: 41 LYVGHLSTHTRTKDVEYLFGRYGRIRCVELKHD-----YGFVEFSNPRDADDARYELDGQ 95
Query: 69 NFDGCRLRVELAHGGSGRGPSSS 91
+ DG R+ VE A G+ RGP S
Sbjct: 96 DVDGSRIIVEFAR-GTPRGPGGS 117
>gi|224120150|ref|XP_002318257.1| predicted protein [Populus trichocarpa]
gi|222858930|gb|EEE96477.1| predicted protein [Populus trichocarpa]
Length = 329
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 79/183 (43%), Gaps = 35/183 (19%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R+I+ GN D R+ E+E LF +YGR+ +++K + F+ E+ RDAEDAIRG D
Sbjct: 2 RSIFCGNFEYDARQTELERLFKRYGRVERVDMKA-----GFAFIYMEDERDAEDAIRGLD 56
Query: 67 GYNF--DGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
F G RL VE + RG GG+ + + +R S+
Sbjct: 57 RVEFGRKGRRLHVEW----------TKQERGARQPGGS-----------SRKSANTRPSK 95
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDD 184
++ P +DL+ H G + + R+ + V Y ED A + LD
Sbjct: 96 TLFVINFDPHHTRTKDLERHFEPYGRIVSVRIRRN----FAFVQYEAQED---ATKALDA 148
Query: 185 TEF 187
T
Sbjct: 149 TNM 151
>gi|30687109|ref|NP_850280.1| arginine/serine-rich zinc knuckle-containing protein 33
[Arabidopsis thaliana]
gi|75331124|sp|Q8VYA5.1|RSZ33_ARATH RecName: Full=Serine/arginine-rich splicing factor RS2Z33; AltName:
Full=RS-containing zinc finger protein 33;
Short=At-RS2Z33; Short=At-RSZ33
gi|18252179|gb|AAL61922.1| unknown protein [Arabidopsis thaliana]
gi|21386957|gb|AAM47882.1| unknown protein [Arabidopsis thaliana]
gi|51971244|dbj|BAD44314.1| unknown protein [Arabidopsis thaliana]
gi|330254293|gb|AEC09387.1| arginine/serine-rich zinc knuckle-containing protein 33
[Arabidopsis thaliana]
Length = 290
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 53/93 (56%), Gaps = 6/93 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L S R ++E LF +YGR+ D+++K Y FVEF + RDA+DA DG
Sbjct: 13 LYVGRLSSRTRTRDLERLFSRYGRVRDVDMKRD-----YAFVEFGDPRDADDARHYLDGR 67
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGG 101
+FDG R+ VE + G RG D RG G G
Sbjct: 68 DFDGSRITVEFSRGAP-RGSRDFDSRGPPPGAG 99
>gi|340506876|gb|EGR32928.1| splicing arginine serine-rich 4, putative [Ichthyophthirius
multifiliis]
Length = 243
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 7/118 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++GNL D + ++E++F KYG + +I++K Y F+EF++ RDA+DA+ +
Sbjct: 25 LFIGNLSKDADKRDLENIFKKYGTVKEIKIKATG-SNHYGFIEFQDHRDAKDALDDCNNM 83
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
F G ++R+E HGG R R + G + A + + RH YR
Sbjct: 84 EFKGKQIRLEFGHGGKRR------RENCFNCGYSNHATKDCTRSRRDSYDRHRHGSYR 135
>gi|326920602|ref|XP_003206558.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Meleagris
gallopavo]
Length = 233
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 63/137 (45%), Gaps = 11/137 (8%)
Query: 51 EFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGA 110
EFE+ RDA+DA+ DG C RV + H + R + A
Sbjct: 12 EFEDPRDADDAVYELDGKEL--CSERVTIEHARARSRGRGRGRYSDRFSSRRPRSDRRSA 69
Query: 111 GAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYT 170
+E R+IV L S SWQDLKD MR+AG+V FA+ R + GVV++
Sbjct: 70 P--------PLRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR-PKLNEGVVEFA 120
Query: 171 NPEDMKYAIRKLDDTEF 187
+ D+K AI KL E
Sbjct: 121 SYSDLKNAIEKLSGKEI 137
>gi|313222821|emb|CBY41772.1| unnamed protein product [Oikopleura dioica]
Length = 730
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 76/158 (48%), Gaps = 16/158 (10%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
++++GNL R ++E F YG + DI LK Y FV+F++ DA+DA++ D
Sbjct: 168 HSVFIGNLSDHARHEDIEKFFKGYGSLRDISLK-----GGYGFVQFKDKYDAKDAVQDLD 222
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGR---------- 116
G G ++R+EL++GG R D + + + + + R
Sbjct: 223 GKEICGQKVRIELSNGGRDRTRRGRDSYSRSRSRSRDNSRYSRSTSKSPRRSFYERTAYR 282
Query: 117 -FGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCF 153
+G + ++Y + + L SWQDLKD R+ G+V +
Sbjct: 283 KYGAPKKTKYAIEIENLSERVSWQDLKDFFRRVGEVSY 320
>gi|224136870|ref|XP_002322436.1| predicted protein [Populus trichocarpa]
gi|222869432|gb|EEF06563.1| predicted protein [Populus trichocarpa]
Length = 343
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 77/184 (41%), Gaps = 37/184 (20%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R I+ GN D R+ E+E LF +YGR+ +++K + F+ E+ RDAEDAIRG D
Sbjct: 2 RPIFCGNFEYDARQTELERLFKRYGRVERVDMKS-----GFAFIYMEDERDAEDAIRGLD 56
Query: 67 GYNF--DGCRLRVELAHGGSG-RGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHS 123
F G RLRVE G R P + RR +R S
Sbjct: 57 RVEFGRKGRRLRVEWTKQERGIRRPGGTSRRSTN----------------------TRPS 94
Query: 124 EYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLD 183
+ ++ P +DL+ H G + + R+ + V Y ED A + LD
Sbjct: 95 KTLFVINFDPHHTRTKDLERHFEPYGRIVSVRIRRN----FAFVQYEAQED---ATKALD 147
Query: 184 DTEF 187
T
Sbjct: 148 ATNL 151
>gi|170054825|ref|XP_001863306.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167874993|gb|EDS38376.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 246
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L ++ + E+ED F YG + ++ + PP + FVEFE+ARDAED++RG DG
Sbjct: 10 VYVGELGNNASKQEIEDAFSYYGPLRNV--WVARNPPGFAFVEFEDARDAEDSVRGLDGR 67
Query: 69 NFDGCRLRVELA 80
G R RVEL+
Sbjct: 68 TICGRRARVELS 79
>gi|162457883|ref|NP_001105264.1| arginine/serine-rich splicing factor 2 variant 2 [Zea mays]
gi|47680309|gb|AAT37138.1| arginine/serine-rich splicing factor 2 variant 2 [Zea mays]
gi|47680375|gb|AAT37129.1| arginine/serine-rich splicing factor 2 variant 2 [Zea mays]
Length = 193
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R ++VGNL D R E++ LFY+YGR+ I++K Y FV FE+ RD DAIR D
Sbjct: 2 RPVFVGNLDYDTRHSELDRLFYRYGRVERIDIK-----SGYAFVYFEDERDGNDAIRALD 56
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDR 93
GY F R R+ + G P ++ +
Sbjct: 57 GYPFGPGRRRLSVEWSRDGNKPEANTK 83
>gi|196009125|ref|XP_002114428.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190583447|gb|EDV23518.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 247
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 54/95 (56%), Gaps = 7/95 (7%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+GNL S ++E+E F +YG + D+ I PP + FV F++ DA+DA+ DG
Sbjct: 7 VYIGNLGSGAAKHEIEKEFARYGPLKDVW--IARNPPGFAFVVFDDPLDAQDAVEALDGR 64
Query: 69 NFDGCRLRVELAHGGS----GRGPSSSDRRGGYGG 99
G R+RVE+A G S R D RGGYGG
Sbjct: 65 RLCGARVRVEIARGDSHPSVKRSTGHRD-RGGYGG 98
>gi|223649236|gb|ACN11376.1| Splicing factor, arginine/serine-rich 6 [Salmo salar]
Length = 266
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 112 AGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTN 171
G ++G +EYR+IV L S SWQDLKD MR+AG+V +A+ ++ GV+++ +
Sbjct: 30 TGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKE-RTNEGVIEFGS 88
Query: 172 PEDMKYAIRKLDDTEF 187
DM+ A+ KLD T+
Sbjct: 89 RSDMRRALDKLDGTDI 104
>gi|405974565|gb|EKC39200.1| RNA-binding protein 4 [Crassostrea gigas]
Length = 226
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 12/101 (11%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M S +Y+GNLP R+ +++ +F YG++++ ++ YCF+ FEN +A+
Sbjct: 1 MPPSISTKLYIGNLPETCRKADLQKMFEAYGKVIECDIVR-----NYCFIHFENPNEAKM 55
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGG 101
A DG +F+G +L+VE++H S ++ G GG G
Sbjct: 56 AQANLDGVDFEGVKLKVEMSH-------SKVRQKPGMGGKG 89
>gi|299115572|emb|CBN75775.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 555
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 50/99 (50%), Gaps = 8/99 (8%)
Query: 111 GAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEG---TYGVV 167
G A G+ RV V L WQDLKDHMR AG+V A+V RD+ G G+V
Sbjct: 35 GMSAPPVGVMTTGITRVYVGNLSWETEWQDLKDHMRTAGEVVRADVMRDASGRSKGCGIV 94
Query: 168 DYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPS 206
+Y P + + AI L DTE +GR+ R DR +
Sbjct: 95 EYRTPAEAQEAINTLLDTEL-----KGRLIFVREDREAA 128
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 44/82 (53%), Gaps = 9/82 (10%)
Query: 126 RVIVRGLPSSASWQDLKDHMR-KAGDVCFAEVSRDSEG---TYGVVDYTNPEDMKYAIRK 181
RV V L +WQDLKDHMR G+V A+V D G G+V+Y PE AI +
Sbjct: 152 RVYVGNLAWDVAWQDLKDHMRGLGGEVIRADVMTDQGGRSRGCGIVEYAEPEQATQAIEQ 211
Query: 182 LDDTEFRNPWARGRITVKRYDR 203
L+++E +N R+ R DR
Sbjct: 212 LNNSELKN-----RMIFVREDR 228
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEG---TYGVVDYTNPEDMKYAIRKL 182
R+ V L + WQ+LKDHMR G V A+V +D +G G+V+Y + AIR+L
Sbjct: 315 RIYVGNLAWTVEWQELKDHMRTVGKVVHADVLQDGDGRSKGCGIVEYEDIRGANRAIREL 374
Query: 183 DDTEF 187
++T
Sbjct: 375 NNTAL 379
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEV----SRDSEGTYGVVDYTNPEDMKYAIRK 181
++ V L +W DLKDH R AG+V A+V SR S+G +G V + E+ + AI++
Sbjct: 427 QLYVGNLSFETTWADLKDHFRTAGEVERADVMMDGSRRSKG-WGTVRFRTQEEAQSAIQE 485
Query: 182 LDDTEF 187
L+ TE
Sbjct: 486 LNGTEL 491
>gi|297828391|ref|XP_002882078.1| hypothetical protein ARALYDRAFT_483824 [Arabidopsis lyrata subsp.
lyrata]
gi|297327917|gb|EFH58337.1| hypothetical protein ARALYDRAFT_483824 [Arabidopsis lyrata subsp.
lyrata]
Length = 250
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 76/175 (43%), Gaps = 32/175 (18%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R ++VGN D R+ ++E LF KYGR+ +++K Y FV FE+ RDAEDAIRG D
Sbjct: 2 RPVFVGNFDYDTRQSDLERLFSKYGRVERVDMKS-----GYAFVYFEDERDAEDAIRGTD 56
Query: 67 G--YNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
+ ++ +L VE A G G RG G A R ++
Sbjct: 57 NTTFGYERRKLSVEWAKGFKG-------ERGKPRDGKAASN--------------QRPTK 95
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAI 179
++ P +D++ H G V + R+ + V + ED A+
Sbjct: 96 TLFVINFDPIRTRERDMERHFEPYGKVLNVRIRRN----FAFVQFATQEDATKAL 146
>gi|384948768|gb|AFI37989.1| serine/arginine-rich splicing factor 3 [Macaca mulatta]
Length = 164
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSVW--VARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGCRLRVELAHGGS---GRGPSSS 91
GCR+RVEL++G RGP S
Sbjct: 70 TLCGCRVRVELSNGEKRSRNRGPPPS 95
>gi|354484028|ref|XP_003504193.1| PREDICTED: serine/arginine-rich splicing factor 3-like
[Cricetulus griseus]
gi|344255990|gb|EGW12094.1| Splicing factor, arginine/serine-rich 3 [Cricetulus griseus]
Length = 164
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELEHAFGYYGPLRSVWVAR--NPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGCRLRVELAHGGS---GRGPSSS 91
GCR+RVEL++G RGP S
Sbjct: 70 TLCGCRVRVELSNGEKRSRNRGPPPS 95
>gi|308502850|ref|XP_003113609.1| CRE-RSP-5 protein [Caenorhabditis remanei]
gi|308263568|gb|EFP07521.1| CRE-RSP-5 protein [Caenorhabditis remanei]
Length = 215
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 50/90 (55%), Gaps = 11/90 (12%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IY+G +P + RE ++E YGRI +I +K + FV+FE+ RDAEDA DG
Sbjct: 4 IYLGKIPYNARERDIERFLKGYGRITNISMKY-----GFAFVDFEDHRDAEDACHDLDGK 58
Query: 69 NFDGCRLR--VELAHGGSGRGPSSSDRRGG 96
DG +R VE+A G P SD RGG
Sbjct: 59 TMDGGSMRVVVEMARG----KPRGSDARGG 84
>gi|294909807|ref|XP_002777856.1| splicing factor, putative [Perkinsus marinus ATCC 50983]
gi|239885818|gb|EER09651.1| splicing factor, putative [Perkinsus marinus ATCC 50983]
Length = 360
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 8 TIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDG 67
T+YVGN+ S E +++D F +YGR+ I IPP CFVE+++ RDAEDA RG
Sbjct: 6 TLYVGNISSRTTERDIKDEFGRYGRV--IRCYIPP-GKNICFVEYDDERDAEDAYRGMAS 62
Query: 68 YNFDGCRLRVELAHGG 83
DG L ++ A G
Sbjct: 63 ARVDGNTLNLQWAKAG 78
>gi|149390935|gb|ABR25485.1| pre mRNA splicing factor sf2 [Oryza sativa Indica Group]
Length = 154
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 34/41 (82%)
Query: 162 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 202
GT G+VDYTN +DMKYAIRKLDD+EF+N +++ I VK YD
Sbjct: 3 GTIGIVDYTNYDDMKYAIRKLDDSEFKNAFSKAYIRVKEYD 43
>gi|339243139|ref|XP_003377495.1| splicing factor, arginine/serine-rich 3 [Trichinella spiralis]
gi|316973698|gb|EFV57260.1| splicing factor, arginine/serine-rich 3 [Trichinella spiralis]
Length = 163
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 55/91 (60%), Gaps = 5/91 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP E+E++F ++G + ++ + RP + FVEFE+ARDA DA+R DG
Sbjct: 38 VYVGGLPERASRGELEEIFGRFGPLRNV--WVARRPWGFAFVEFEDARDAIDAVRQLDGS 95
Query: 69 NFDGCRLRVELAHGG-SGRGPSSSD--RRGG 96
G R RVEL+HG RGP D RRGG
Sbjct: 96 RMCGVRARVELSHGQRRNRGPRGYDDERRGG 126
>gi|213514036|ref|NP_001133737.1| Splicing factor, arginine/serine-rich 6 [Salmo salar]
gi|209155158|gb|ACI33811.1| Splicing factor, arginine/serine-rich 6 [Salmo salar]
Length = 261
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 112 AGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTN 171
G ++G +EYR+IV L S SWQDLKD MR+AG+V +A+ ++ GV+++ +
Sbjct: 27 TGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNE-GVIEFGS 85
Query: 172 PEDMKYAIRKLDDTEF 187
DM+ A+ KLD T+
Sbjct: 86 RSDMRRALDKLDGTDI 101
>gi|221480768|gb|EEE19199.1| arginine/serine-rich splicing factor, putative [Toxoplasma gondii
GT1]
Length = 1335
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 92/216 (42%), Gaps = 48/216 (22%)
Query: 6 SRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGR 65
R ++VGN P +RE VE +F ++G++ +I++ + + +++A A A+
Sbjct: 175 ERKVFVGNTPLAVREPSVERIFGEFGKLSEIKIFK-----HFLHLTYDDATAATRAVEEL 229
Query: 66 DGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGG-----------GAGGAGG------- 107
+ G ++ VE G ++S R G G GA G
Sbjct: 230 NDKEVWGAQIVVEPLRPG-----AASQRPPGAGAARVVVSRGERDTGAPGVERGRGRGRS 284
Query: 108 ---AGAGAGAGRFGIS----------------RHSEYRVIVRGLPSSASWQDLKDHMRKA 148
AG G AG + + +RV+ L WQDLKD R+A
Sbjct: 285 GAVAGRGKSAGSVAGARRGGRGRGGQAAGPGGKRLPFRVVCHNLDPRVHWQDLKDFGREA 344
Query: 149 GDVCFAEVSRDSEGT-YGVVDYTNPEDMKYAIRKLD 183
G+V F V + EG G+++Y + EDM+ A+ +LD
Sbjct: 345 GEVNFTNVLHNQEGVRIGIIEYCSQEDMETALHELD 380
>gi|226494041|ref|NP_001147698.1| arginine/serine-rich splicing factor RSP41 [Zea mays]
gi|195613160|gb|ACG28410.1| arginine/serine-rich splicing factor RSP41 [Zea mays]
gi|195655913|gb|ACG47424.1| arginine/serine-rich splicing factor RSP41 [Zea mays]
Length = 279
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 79/183 (43%), Gaps = 32/183 (17%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R ++ GNL D+R EVE LF KYGR+ ++LK + FV E+ RDAEDAI D
Sbjct: 2 RPVFCGNLDYDVRISEVERLFGKYGRVERVDLKT-----GFAFVYMEDERDAEDAISRLD 56
Query: 67 GYNF--DGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
G +F G R+RVE G SS RR ++ ++
Sbjct: 57 GIDFGRKGRRIRVEWTKEDRTVGRKSSSRRSPTN---------------------TKPTK 95
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDD 184
++ P + +DL+ H K G V + ++ + + + ED A+ +
Sbjct: 96 TLFVINFDPINTRIRDLERHFDKYGRVANVRIKKN----FAFIQFEVQEDATRALEGTNG 151
Query: 185 TEF 187
+ F
Sbjct: 152 SHF 154
>gi|195338789|ref|XP_002036006.1| GM13734 [Drosophila sechellia]
gi|194129886|gb|EDW51929.1| GM13734 [Drosophila sechellia]
Length = 226
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R +YVG+L ++ R+ ++E +F YG + + I PP + FVEFE+ARDA DA+RG D
Sbjct: 8 RKVYVGDLGNNARKNDLEYVFGAYGSLRSVW--IARNPPGFAFVEFESARDAADAVRGLD 65
Query: 67 GYNFDGCRLRVELAHGGSGR 86
G G R RVEL+ G R
Sbjct: 66 GRTVCGRRARVELSTGKYAR 85
>gi|417407793|gb|JAA50492.1| Putative splicing factor arginine/serine-rich 3, partial
[Desmodus rotundus]
Length = 116
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 4 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 61
Query: 69 NFDGCRLRVELAHGGS---GRGPSSS 91
GCR+RVEL++G RGP S
Sbjct: 62 TLCGCRVRVELSNGEKRSRNRGPPPS 87
>gi|194696906|gb|ACF82537.1| unknown [Zea mays]
gi|413935351|gb|AFW69902.1| arginine/serine-rich splicing factor RSP41 [Zea mays]
Length = 279
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 79/183 (43%), Gaps = 32/183 (17%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R ++ GNL D+R EVE LF KYGR+ ++LK + FV E+ RDAEDAI D
Sbjct: 2 RPVFCGNLDYDVRISEVERLFGKYGRVERVDLKT-----GFAFVYMEDERDAEDAISRLD 56
Query: 67 GYNF--DGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
G +F G R+RVE G SS RR ++ ++
Sbjct: 57 GIDFGRKGRRIRVEWTKEDRTVGRKSSSRRSPTN---------------------TKPTK 95
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDD 184
++ P + +DL+ H K G V + ++ + + + ED A+ +
Sbjct: 96 TLFVINFDPINTRIRDLERHFDKYGRVANVRIKKN----FAFIQFEIQEDATRALEGTNG 151
Query: 185 TEF 187
+ F
Sbjct: 152 SHF 154
>gi|221501413|gb|EEE27190.1| cold-inducible RNA binding protein, putative [Toxoplasma gondii
VEG]
Length = 1335
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 92/216 (42%), Gaps = 48/216 (22%)
Query: 6 SRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGR 65
R ++VGN P +RE VE +F ++G++ +I++ + + +++A A A+
Sbjct: 175 ERKVFVGNTPLAVREPSVERIFGEFGKLSEIKIFK-----HFLHLTYDDATAATRAVEEL 229
Query: 66 DGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGG-----------GAGGAGG------- 107
+ G ++ VE G ++S R G G GA G
Sbjct: 230 NDKEVWGAQIVVEPLRPG-----AASQRPPGAGAARVVVSRGERDTGAPGVERGRGRGRS 284
Query: 108 ---AGAGAGAGRFGIS----------------RHSEYRVIVRGLPSSASWQDLKDHMRKA 148
AG G AG + + +RV+ L WQDLKD R+A
Sbjct: 285 GAVAGRGKSAGSVAGARRGGRGRGGQAAGPGGKRLPFRVVCHNLDPRVHWQDLKDFGREA 344
Query: 149 GDVCFAEVSRDSEGT-YGVVDYTNPEDMKYAIRKLD 183
G+V F V + EG G+++Y + EDM+ A+ +LD
Sbjct: 345 GEVNFTNVLHNQEGVRIGIIEYCSQEDMETALHELD 380
>gi|427784005|gb|JAA57454.1| Putative alternative splicing factor [Rhipicephalus pulchellus]
Length = 181
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 56/95 (58%), Gaps = 3/95 (3%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGR +++G LP D RE +VE +F +YGR+L ++K Y FV++E+ RDAED
Sbjct: 1 MSGRGQ--LFIGRLPLDTRERDVEQVFERYGRLLRCDVKYGT-GMAYAFVDYEDHRDAED 57
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRG 95
A++ +G G + VE A G S R + DR G
Sbjct: 58 AVKYENGREIRGQSVVVEWARGPSFRPSAGKDRMG 92
>gi|307103428|gb|EFN51688.1| hypothetical protein CHLNCDRAFT_139931 [Chlorella variabilis]
Length = 187
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++GNLP I + +VED+F K+GR+ + +PP + FVE+E+ RDAEDA+RG DG
Sbjct: 4 LWIGNLPPGIPDRDVEDVFAKFGRLRSCWVAR--KPPGFGFVEYEDRRDAEDAVRGTDGK 61
Query: 69 NFDGCRLRVELAHG 82
N G R+ A G
Sbjct: 62 N--GWRVEFARAAG 73
>gi|238014292|gb|ACR38181.1| unknown [Zea mays]
gi|413950154|gb|AFW82803.1| hypothetical protein ZEAMMB73_678679 [Zea mays]
gi|448878172|gb|AGE46049.1| arginine/serine-rich splicing factor RS2Z37A transcript I [Zea
mays]
Length = 325
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L R ++E LF KYGRI ++ELK Y F+EF + RDA+DA DG
Sbjct: 13 LYVGRLSPRTRSRDLEYLFSKYGRIREVELKR-----DYAFIEFSDPRDADDAQYNLDGR 67
Query: 69 NFDGCRLRVELAHG 82
+ DG R+ VE A G
Sbjct: 68 DVDGSRIIVEFAKG 81
>gi|149640565|ref|XP_001509029.1| PREDICTED: serine/arginine-rich splicing factor 3-like
[Ornithorhynchus anatinus]
Length = 164
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSVWVAR--NPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGCRLRVELAHG---GSGRGPSSS 91
GCR+RVEL++G RGP S
Sbjct: 70 TLCGCRVRVELSNGEKRNRNRGPPPS 95
>gi|24645769|ref|NP_731510.1| RNA-binding protein 1, isoform D [Drosophila melanogaster]
gi|194902212|ref|XP_001980643.1| GG17683 [Drosophila erecta]
gi|195330033|ref|XP_002031713.1| GM23896 [Drosophila sechellia]
gi|195571925|ref|XP_002103951.1| GD18708 [Drosophila simulans]
gi|55584177|sp|Q02427.3|RBP1_DROME RecName: Full=RNA-binding protein 1
gi|17861840|gb|AAL39397.1| GM02602p [Drosophila melanogaster]
gi|23170942|gb|AAN13487.1| RNA-binding protein 1, isoform D [Drosophila melanogaster]
gi|190652346|gb|EDV49601.1| GG17683 [Drosophila erecta]
gi|194120656|gb|EDW42699.1| GM23896 [Drosophila sechellia]
gi|194199878|gb|EDX13454.1| GD18708 [Drosophila simulans]
gi|220943202|gb|ACL84144.1| Rbp1-PB [synthetic construct]
gi|220953396|gb|ACL89241.1| Rbp1-PB [synthetic construct]
Length = 144
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL S ++E+E F KYG + ++ + PP + FVEFE+ RDAEDA R DG
Sbjct: 13 VYVGNLGSSASKHEIEGAFAKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRALDGT 70
Query: 69 NFDGCRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|253723275|pdb|2I38|A Chain A, Solution Structure Of The Rrm Of Srp20
Length = 150
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 76 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRDLDGR 133
Query: 69 NFDGCRLRVELAHG 82
GCR+RVEL++G
Sbjct: 134 TLCGCRVRVELSNG 147
>gi|341892188|gb|EGT48123.1| CBN-RSP-5 protein [Caenorhabditis brenneri]
gi|341901487|gb|EGT57422.1| hypothetical protein CAEBREN_20510 [Caenorhabditis brenneri]
Length = 204
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 50/88 (56%), Gaps = 7/88 (7%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G +P + RE ++E YGRI +I +K + FV+FE++RDAEDA DG
Sbjct: 4 LYLGKIPYNARERDIERFLKGYGRITNISMKY-----GFAFVDFEDSRDAEDACHDLDGR 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGG 96
DG +RV + GR P SD RGG
Sbjct: 59 TMDGSSMRV-VVQMARGR-PRGSDARGG 84
>gi|350596827|ref|XP_003128414.2| PREDICTED: serine/arginine-rich splicing factor 3-like [Sus
scrofa]
Length = 151
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSVWVAR--NPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGCRLRVELAHGGS---GRGPSSS 91
GCR+RVEL++G RGP S
Sbjct: 70 TLCGCRVRVELSNGEKRSRNRGPPPS 95
>gi|327271253|ref|XP_003220402.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Anolis
carolinensis]
Length = 164
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSVWVAR--NPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGCRLRVELAHGGS---GRGPSSS 91
GCR+RVEL++G RGP S
Sbjct: 70 TLCGCRVRVELSNGEKRSRNRGPPPS 95
>gi|296487190|tpg|DAA29303.1| TPA: splicing factor, arginine/serine-rich 3-like [Bos taurus]
Length = 164
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSVWVAR--NPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGCRLRVELAHGGS---GRGPSSS 91
GCR+RVEL++G RGP S
Sbjct: 70 TLCGCRVRVELSNGEKRSRNRGPPPS 95
>gi|4506901|ref|NP_003008.1| serine/arginine-rich splicing factor 3 [Homo sapiens]
gi|8567402|ref|NP_038691.1| serine/arginine-rich splicing factor 3 [Mus musculus]
gi|77736345|ref|NP_001029872.1| serine/arginine-rich splicing factor 3 [Bos taurus]
gi|114145746|ref|NP_001041372.1| splicing factor, arginine/serine-rich 3 [Rattus norvegicus]
gi|305855200|ref|NP_001182245.1| serine/arginine-rich splicing factor 3 [Ovis aries]
gi|307078119|ref|NP_001182483.1| splicing factor, arginine/serine-rich 3 [Gallus gallus]
gi|307078159|ref|NP_001182496.1| splicing factor, arginine/serine-rich 3 [Pongo abelii]
gi|350538573|ref|NP_001232578.1| putative splicing factor arginine/serine-rich 3 variant 2
[Taeniopygia guttata]
gi|114607174|ref|XP_001173216.1| PREDICTED: uncharacterized protein LOC747921 isoform 5 [Pan
troglodytes]
gi|126309787|ref|XP_001370000.1| PREDICTED: serine/arginine-rich splicing factor 3-like
[Monodelphis domestica]
gi|149732155|ref|XP_001499880.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Equus
caballus]
gi|296198029|ref|XP_002746526.1| PREDICTED: serine/arginine-rich splicing factor 3-like isoform 2
[Callithrix jacchus]
gi|301756971|ref|XP_002914334.1| PREDICTED: splicing factor, arginine/serine-rich 3-like
[Ailuropoda melanoleuca]
gi|326933663|ref|XP_003212920.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Meleagris
gallopavo]
gi|332255653|ref|XP_003276947.1| PREDICTED: serine/arginine-rich splicing factor 3 isoform 1
[Nomascus leucogenys]
gi|332255655|ref|XP_003276948.1| PREDICTED: serine/arginine-rich splicing factor 3 isoform 2
[Nomascus leucogenys]
gi|332823925|ref|XP_003311314.1| PREDICTED: uncharacterized protein LOC747921 [Pan troglodytes]
gi|338717417|ref|XP_003363635.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Equus
caballus]
gi|344263812|ref|XP_003403989.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Loxodonta
africana]
gi|345778693|ref|XP_532124.3| PREDICTED: serine/arginine-rich splicing factor 3 [Canis lupus
familiaris]
gi|348576314|ref|XP_003473932.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Cavia
porcellus]
gi|350586583|ref|XP_003482220.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Sus
scrofa]
gi|395534031|ref|XP_003769052.1| PREDICTED: serine/arginine-rich splicing factor 3 [Sarcophilus
harrisii]
gi|395832270|ref|XP_003789196.1| PREDICTED: serine/arginine-rich splicing factor 3 [Otolemur
garnettii]
gi|397496243|ref|XP_003818951.1| PREDICTED: serine/arginine-rich splicing factor 3 [Pan paniscus]
gi|402866823|ref|XP_003897573.1| PREDICTED: serine/arginine-rich splicing factor 3 [Papio anubis]
gi|403261702|ref|XP_003923252.1| PREDICTED: serine/arginine-rich splicing factor 3 [Saimiri
boliviensis boliviensis]
gi|410040712|ref|XP_003950873.1| PREDICTED: uncharacterized protein LOC747921 [Pan troglodytes]
gi|410040714|ref|XP_003950874.1| PREDICTED: uncharacterized protein LOC747921 [Pan troglodytes]
gi|410959034|ref|XP_003986117.1| PREDICTED: serine/arginine-rich splicing factor 3 [Felis catus]
gi|426352928|ref|XP_004043955.1| PREDICTED: serine/arginine-rich splicing factor 3 [Gorilla
gorilla gorilla]
gi|426352930|ref|XP_004043956.1| PREDICTED: serine/arginine-rich splicing factor 3 [Gorilla
gorilla gorilla]
gi|426352932|ref|XP_004043957.1| PREDICTED: serine/arginine-rich splicing factor 3 [Gorilla
gorilla gorilla]
gi|426352934|ref|XP_004043958.1| PREDICTED: serine/arginine-rich splicing factor 3 [Gorilla
gorilla gorilla]
gi|441648624|ref|XP_004090899.1| PREDICTED: serine/arginine-rich splicing factor 3 [Nomascus
leucogenys]
gi|441648629|ref|XP_004090900.1| PREDICTED: serine/arginine-rich splicing factor 3 [Nomascus
leucogenys]
gi|441648632|ref|XP_004090901.1| PREDICTED: serine/arginine-rich splicing factor 3 [Nomascus
leucogenys]
gi|51338672|sp|P84103.1|SRSF3_HUMAN RecName: Full=Serine/arginine-rich splicing factor 3; AltName:
Full=Pre-mRNA-splicing factor SRP20; AltName:
Full=Splicing factor, arginine/serine-rich 3
gi|51338673|sp|P84104.1|SRSF3_MOUSE RecName: Full=Serine/arginine-rich splicing factor 3; AltName:
Full=Pre-mRNA-splicing factor SRP20; AltName:
Full=Protein X16; AltName: Full=Splicing factor,
arginine/serine-rich 3
gi|122145080|sp|Q3SZR8.1|SRSF3_BOVIN RecName: Full=Serine/arginine-rich splicing factor 3; AltName:
Full=Splicing factor, arginine/serine-rich 3
gi|5531904|gb|AAD44523.1|AF107405_1 pre-mRNA splicing factor [Homo sapiens]
gi|55440|emb|CAA37821.1| X16 [Mus musculus]
gi|338484|gb|AAA36648.1| pre-mRNA splicing factor [Homo sapiens]
gi|2125863|emb|CAA62844.1| splicing factor [Mus musculus]
gi|12654193|gb|AAH00914.1| Splicing factor, arginine/serine-rich 3 [Homo sapiens]
gi|12847924|dbj|BAB27762.1| unnamed protein product [Mus musculus]
gi|26347593|dbj|BAC37445.1| unnamed protein product [Mus musculus]
gi|30582873|gb|AAP35663.1| splicing factor, arginine/serine-rich 3 [Homo sapiens]
gi|45768791|gb|AAH68111.1| Splicing factor, arginine/serine-rich 3 (SRp20) [Mus musculus]
gi|46362469|gb|AAH69018.1| Splicing factor, arginine/serine-rich 3 [Homo sapiens]
gi|47940164|gb|AAH71196.1| Splicing factor, arginine/serine-rich 3 (SRp20) [Mus musculus]
gi|53734444|gb|AAH83316.1| Splicing factor, arginine/serine-rich 3 (SRp20) [Mus musculus]
gi|60655009|gb|AAX32068.1| splicing factor arginine/serine-rich 3 [synthetic construct]
gi|60655011|gb|AAX32069.1| splicing factor arginine/serine-rich 3 [synthetic construct]
gi|74137380|dbj|BAE22040.1| unnamed protein product [Mus musculus]
gi|74139940|dbj|BAE31808.1| unnamed protein product [Mus musculus]
gi|74179670|dbj|BAE22483.1| unnamed protein product [Mus musculus]
gi|74181349|dbj|BAE29950.1| unnamed protein product [Mus musculus]
gi|74203068|dbj|BAE26230.1| unnamed protein product [Mus musculus]
gi|74216995|dbj|BAE26606.1| unnamed protein product [Mus musculus]
gi|74222015|dbj|BAE26830.1| unnamed protein product [Mus musculus]
gi|74226734|dbj|BAE27015.1| unnamed protein product [Mus musculus]
gi|74354685|gb|AAI02736.1| Splicing factor, arginine/serine-rich 3 [Bos taurus]
gi|90076534|dbj|BAE87947.1| unnamed protein product [Macaca fascicularis]
gi|90080349|dbj|BAE89656.1| unnamed protein product [Macaca fascicularis]
gi|109692284|gb|ABG37970.1| unknown [Rattus norvegicus]
gi|119624306|gb|EAX03901.1| splicing factor, arginine/serine-rich 3, isoform CRA_d [Homo
sapiens]
gi|119624308|gb|EAX03903.1| splicing factor, arginine/serine-rich 3, isoform CRA_d [Homo
sapiens]
gi|148690659|gb|EDL22606.1| mCG21131, isoform CRA_d [Mus musculus]
gi|149043499|gb|EDL96950.1| rCG61099, isoform CRA_c [Rattus norvegicus]
gi|165875525|gb|ABY68590.1| pre-mRNA splicing factor SRP20-like protein [Ovis aries]
gi|189069112|dbj|BAG35450.1| unnamed protein product [Homo sapiens]
gi|197127497|gb|ACH43995.1| putative splicing factor arginine/serine-rich 3 variant 2
[Taeniopygia guttata]
gi|197692159|dbj|BAG70043.1| splicing factor arginine/serine-rich 3 [Homo sapiens]
gi|197692405|dbj|BAG70166.1| splicing factor arginine/serine-rich 3 [Homo sapiens]
gi|261860472|dbj|BAI46758.1| splicing factor, arginine/serine-rich 3 [synthetic construct]
gi|296474519|tpg|DAA16634.1| TPA: splicing factor, arginine/serine-rich 3 [Bos taurus]
gi|349603122|gb|AEP99052.1| Splicing factor, arginine/serine-rich 3-like protein [Equus
caballus]
gi|351701484|gb|EHB04403.1| Splicing factor, arginine/serine-rich 3 [Heterocephalus glaber]
gi|380815558|gb|AFE79653.1| serine/arginine-rich splicing factor 3 [Macaca mulatta]
gi|383420725|gb|AFH33576.1| serine/arginine-rich splicing factor 3 [Macaca mulatta]
gi|410221336|gb|JAA07887.1| serine/arginine-rich splicing factor 3 [Pan troglodytes]
gi|410221338|gb|JAA07888.1| serine/arginine-rich splicing factor 3 [Pan troglodytes]
gi|410357561|gb|JAA44572.1| serine/arginine-rich splicing factor 3 [Pan troglodytes]
gi|417396397|gb|JAA45232.1| Putative serine/arginine-rich splicing factor 3 [Desmodus
rotundus]
gi|431916817|gb|ELK16577.1| Splicing factor, arginine/serine-rich 3 [Pteropus alecto]
Length = 164
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSVWVAR--NPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGCRLRVELAHGGS---GRGPSSS 91
GCR+RVEL++G RGP S
Sbjct: 70 TLCGCRVRVELSNGEKRSRNRGPPPS 95
>gi|52346014|ref|NP_001005054.1| serine/arginine-rich splicing factor 3 [Xenopus (Silurana)
tropicalis]
gi|49900231|gb|AAH76942.1| splicing factor, arginine serine-rich 3 [Xenopus (Silurana)
tropicalis]
gi|89266750|emb|CAJ83969.1| splicing factor, arginine/serine-rich 3 [Xenopus (Silurana)
tropicalis]
Length = 164
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSVWVAR--NPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGCRLRVELAHGGS---GRGPSSS 91
GCR+RVEL++G RGP S
Sbjct: 70 TLCGCRVRVELSNGEKRSRNRGPPPS 95
>gi|324509930|gb|ADY44158.1| Splicing factor, arginine/serine-rich 6 [Ascaris suum]
Length = 136
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VG LP D E+E+ F +YG I + + RPP + F+EFE++RDA+DA++ +G
Sbjct: 17 VFVGGLPHDATTQELEEAFGRYGPIRKVWMA--RRPPGFAFIEFEDSRDADDAVKALNGA 74
Query: 69 NFDGCRLRVELAH 81
G R RVE++H
Sbjct: 75 RICGVRPRVEISH 87
>gi|45387765|ref|NP_991236.1| splicing factor, arginine/serine-rich 7 [Danio rerio]
gi|41350982|gb|AAH65586.1| Zgc:77155 [Danio rerio]
Length = 258
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG+L + + E+E F YG + + + PP + FVE+E+ARDAEDA++G DG
Sbjct: 16 VYVGDLGNGAAKGELERAFSYYGPLRSVWVAR--NPPGFAFVEYEDARDAEDAVKGMDGK 73
Query: 69 NFDGCRLRVELAHGGS 84
G R+RVEL++G S
Sbjct: 74 VLCGARVRVELSNGMS 89
>gi|242063870|ref|XP_002453224.1| hypothetical protein SORBIDRAFT_04g001910 [Sorghum bicolor]
gi|241933055|gb|EES06200.1| hypothetical protein SORBIDRAFT_04g001910 [Sorghum bicolor]
gi|448878270|gb|AGE46098.1| arginine/serine-rich splicing factor RS34 [Sorghum bicolor]
Length = 295
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 79/183 (43%), Gaps = 32/183 (17%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R ++ GNL D+R EVE LF KYGR+ ++LK + FV E+ RDAEDAI D
Sbjct: 2 RPVFCGNLDYDVRISEVERLFGKYGRVERVDLKT-----GFAFVYMEDERDAEDAIHRLD 56
Query: 67 GYNF--DGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
G +F G R+RVE + DR G G A R ++
Sbjct: 57 GIDFGRKGRRIRVEW---------TKEDRTAGRRGSSRRSPTQA------------RPTK 95
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDD 184
++ P + +DL+ H K G V + ++ + V + ED A+ +
Sbjct: 96 TLFVINFDPINTRIRDLERHFDKYGRVANVRIKKN----FAFVQFEVQEDATRALEGTNG 151
Query: 185 TEF 187
+ F
Sbjct: 152 SHF 154
>gi|302845634|ref|XP_002954355.1| hypothetical protein VOLCADRAFT_121301 [Volvox carteri f.
nagariensis]
gi|300260285|gb|EFJ44505.1| hypothetical protein VOLCADRAFT_121301 [Volvox carteri f.
nagariensis]
Length = 287
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+DI E +V D F ++GR+ I + +PP + F+E E+ RDA DA+R DG+
Sbjct: 5 IYVGNLPADIAERDVRDEFERFGRVRTI--WVARKPPGFAFLEMEDDRDASDAVRKLDGF 62
Query: 69 N 69
Sbjct: 63 Q 63
>gi|237845207|ref|XP_002371901.1| hypothetical protein, conserved [Toxoplasma gondii ME49]
gi|211969565|gb|EEB04761.1| hypothetical protein, conserved [Toxoplasma gondii ME49]
Length = 1335
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 92/216 (42%), Gaps = 48/216 (22%)
Query: 6 SRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGR 65
R ++VGN P +RE VE +F ++G++ +I++ + + +++A A A+
Sbjct: 175 ERKVFVGNTPLAVREPSVERIFGEFGKLSEIKIFK-----HFLHLTYDDATAATRAVEEL 229
Query: 66 DGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGG-----------GAGGAGG------- 107
+ G ++ VE G ++S R G G GA G
Sbjct: 230 NDKEVWGAQIVVEPLRPG-----AASQRPPGAGAARVVVSRGERDTGAPGVERGRGRGRS 284
Query: 108 ---AGAGAGAGRFGIS----------------RHSEYRVIVRGLPSSASWQDLKDHMRKA 148
AG G AG + + +RV+ L WQDLKD R+A
Sbjct: 285 GAVAGRGKSAGSVAGARRGGRGRGGQAAGPGGKRLPFRVVCHNLDPRVHWQDLKDFGREA 344
Query: 149 GDVCFAEVSRDSEGT-YGVVDYTNPEDMKYAIRKLD 183
G+V F V + EG G+++Y + EDM+ A+ +LD
Sbjct: 345 GEVNFTNVLHNQEGVRIGIIEYCSQEDMETALHELD 380
>gi|392333750|ref|XP_003752989.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Rattus
norvegicus]
gi|392354119|ref|XP_003751684.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Rattus
norvegicus]
Length = 147
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSVWVAR--NPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGCRLRVELAHGGS---GRGPSSS 91
GCR+RVEL++G RGP S
Sbjct: 70 TLCGCRVRVELSNGEKRSRNRGPPPS 95
>gi|12844972|dbj|BAB26569.1| unnamed protein product [Mus musculus]
Length = 164
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGCRLRVELAHGGS---GRGPSSS 91
GCR+RVEL++G RGP S
Sbjct: 70 TLCGCRVRVELSNGEKRSRNRGPPPS 95
>gi|291396115|ref|XP_002714714.1| PREDICTED: splicing factor, arginine/serine-rich 3 [Oryctolagus
cuniculus]
gi|297290700|ref|XP_001112817.2| PREDICTED: splicing factor, arginine/serine-rich 3-like [Macaca
mulatta]
gi|2125864|emb|CAA62845.1| Srp20 [Mus musculus]
gi|74139694|dbj|BAE31698.1| unnamed protein product [Mus musculus]
gi|74214717|dbj|BAE31197.1| unnamed protein product [Mus musculus]
gi|74220550|dbj|BAE31490.1| unnamed protein product [Mus musculus]
gi|119624303|gb|EAX03898.1| splicing factor, arginine/serine-rich 3, isoform CRA_a [Homo
sapiens]
gi|148690656|gb|EDL22603.1| mCG21131, isoform CRA_a [Mus musculus]
gi|149043498|gb|EDL96949.1| rCG61099, isoform CRA_b [Rattus norvegicus]
gi|194385252|dbj|BAG65003.1| unnamed protein product [Homo sapiens]
Length = 124
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGCRLRVELAHGGS---GRGPSSS 91
GCR+RVEL++G RGP S
Sbjct: 70 TLCGCRVRVELSNGEKRSRNRGPPPS 95
>gi|432857012|ref|XP_004068510.1| PREDICTED: serine/arginine-rich splicing factor 3-like isoform 2
[Oryzias latipes]
Length = 182
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 11 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDATDAVRELDGR 68
Query: 69 NFDGCRLRVELAHG 82
GCR+RVEL++G
Sbjct: 69 TLCGCRVRVELSNG 82
>gi|355718921|gb|AES06431.1| splicing factor, arginine/serine-rich 3 [Mustela putorius furo]
Length = 150
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 49 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 106
Query: 69 NFDGCRLRVELAHGGS---GRGPSSS 91
GCR+RVEL++G RGP S
Sbjct: 107 TLCGCRVRVELSNGEKRSRNRGPPPS 132
>gi|30584291|gb|AAP36394.1| Homo sapiens splicing factor, arginine/serine-rich 3 [synthetic
construct]
gi|61371593|gb|AAX43696.1| splicing factor arginine/serine-rich 3 [synthetic construct]
gi|61371598|gb|AAX43697.1| splicing factor arginine/serine-rich 3 [synthetic construct]
Length = 165
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSVWVAR--NPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGCRLRVELAHGGS---GRGPSSS 91
GCR+RVEL++G RGP S
Sbjct: 70 TLCGCRVRVELSNGEKRSRNRGPPPS 95
>gi|449271649|gb|EMC81933.1| Splicing factor, arginine/serine-rich 3 [Columba livia]
Length = 156
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSVWVAR--NPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGCRLRVELAHGGS---GRGPSSS 91
GCR+RVEL++G RGP S
Sbjct: 70 TLCGCRVRVELSNGEKRSRNRGPPPS 95
>gi|392571790|gb|EIW64962.1| hypothetical protein TRAVEDRAFT_55734 [Trametes versicolor
FP-101664 SS1]
Length = 490
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 50/76 (65%), Gaps = 7/76 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAI-RGRDG 67
+Y+G LP R+ ++E F K G I++IELK+ Y FVEF+N AE+++ + +G
Sbjct: 99 VYIGGLPEHTRKEDLESCFGKIGNIVNIELKV-----GYGFVEFDNREAAEESVAKYHEG 153
Query: 68 YNFDGCRLRVELAHGG 83
Y F G ++RVE++HGG
Sbjct: 154 Y-FMGNKIRVEISHGG 168
>gi|253722541|pdb|2I2Y|A Chain A, Solution Structure Of The Rrm Of Srp20 Bound To The Rna
Cauc
Length = 150
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 76 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 133
Query: 69 NFDGCRLRVELAHG 82
GCR+RVEL++G
Sbjct: 134 TLCGCRVRVELSNG 147
>gi|158296825|ref|XP_317163.4| AGAP008303-PA [Anopheles gambiae str. PEST]
gi|157014898|gb|EAA12231.4| AGAP008303-PA [Anopheles gambiae str. PEST]
Length = 228
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L ++ + ++E+ F YG + ++ + PP + FVEFE+ARDAEDA+RG DG
Sbjct: 10 VYVGELGNNASKQDIEEAFGYYGPLRNV--WVARNPPGFAFVEFEDARDAEDAVRGLDGR 67
Query: 69 NFDGCRLRVELA 80
G R RVEL+
Sbjct: 68 TISGRRARVELS 79
>gi|5441529|emb|CAB46819.1| splicing factor [Canis lupus familiaris]
Length = 133
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGCRLRVELAHGGS---GRGPSSS 91
GCR+RVEL++G RGP S
Sbjct: 70 TLCGCRVRVELSNGEKRSRNRGPPPS 95
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.134 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,571,873,313
Number of Sequences: 23463169
Number of extensions: 225058412
Number of successful extensions: 4239043
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 14730
Number of HSP's successfully gapped in prelim test: 20651
Number of HSP's that attempted gapping in prelim test: 2974421
Number of HSP's gapped (non-prelim): 858306
length of query: 270
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 130
effective length of database: 9,074,351,707
effective search space: 1179665721910
effective search space used: 1179665721910
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 75 (33.5 bits)