BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024274
(270 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O80450|TGT3B_ARATH Trihelix transcription factor GT-3b OS=Arabidopsis thaliana
GN=GT-3B PE=1 SV=1
Length = 289
Score = 139 bits (349), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/271 (39%), Positives = 162/271 (59%), Gaps = 25/271 (9%)
Query: 3 TSSSSSAHAQAVQWGNEETRDLIVIRGETERDLVGIKRNKTIWEIVSVKLRERGYSRTPD 62
+S + + QW EET++LI IRGE ++ + KRNK +WE++S K+R++ + R+P+
Sbjct: 29 IASPVAVGDRFPQWSVEETKELIGIRGELDQTFMETKRNKLLWEVISNKMRDKSFPRSPE 88
Query: 63 QCKCKWKNLVNRYKGKETSDPDSGRQ-CPFFNELHAVFTERAKNMQRLLAESEAGSMQAK 121
QCKCKWKNLV R+KG ET + ++ RQ PF++++ +FT R + M +E G
Sbjct: 89 QCKCKWKNLVTRFKGCETMEAETARQQFPFYDDMQNIFTTRMQRMLWAESEGGGGGTSGA 148
Query: 122 KRFKRLNADE--------LSDEEDDDEEQSEEEEEEEERPARGNSRKRKIERNVSDKSPR 173
R + ++DE L D +D + + P + ++KRK
Sbjct: 149 ARKREYSSDEEEENVNEELVDVSNDPKILN---------PKKNIAKKRK-------GGSN 192
Query: 174 ATSGTAGIHEMLKAFFDQQQRMEVEWRQMMERRAQERQLFEEEWRQRMEKLERERLLVEQ 233
+++ G+ E+L+ F Q RME EWR+ E R +ER EEEWR++ME+LE+ERL +E+
Sbjct: 193 SSNSNNGVREVLEEFMRHQVRMESEWREGWEAREKERAEKEEEWRRKMEELEKERLAMER 252
Query: 234 AWREKEEQRRIREESRAERRDALLTTLLTKL 264
WR++EEQRR REE RAE+RD+L+ LL KL
Sbjct: 253 MWRDREEQRRSREEMRAEKRDSLINALLAKL 283
>sp|Q9SDW0|TGT3A_ARATH Trihelix transcription factor GT-3a OS=Arabidopsis thaliana
GN=GT-3A PE=1 SV=1
Length = 323
Score = 130 bits (328), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 102/269 (37%), Positives = 163/269 (60%), Gaps = 18/269 (6%)
Query: 15 QWGNEETRDLIVIRGETERDLVGIKRNKTIWEIVSVKLRERGYSRTPDQCKCKWKNLVNR 74
QW EET++L+ IR E ++ + KRNK +WE+V+ K+ ++G+ R+ +QCK KWKNLV R
Sbjct: 51 QWSIEETKELLAIREELDQTFMETKRNKLLWEVVAAKMADKGFVRSAEQCKSKWKNLVTR 110
Query: 75 YKGKETSDPDSGR-QCPFFNELHAVFTERAKNMQRLL-AESEAGSMQAKKRFKRLNA--- 129
YK ET++PD+ R Q PF+NE+ ++F R MQR+L +E+ S +K++ + ++
Sbjct: 111 YKACETTEPDAIRQQFPFYNEIQSIFEAR---MQRMLWSEATEPSTSSKRKHHQFSSDDE 167
Query: 130 --------DELSDEEDDDEEQSEEEEEEEERPARGNSRKR-KIERNVSDKSPRATSGTAG 180
++++E E + E E N RKR K + V+ + T+G
Sbjct: 168 EEEVDEPNQDINEELLSLVETQKRETEVITTSTSTNPRKRAKKGKGVASGTKAETAGNT- 226
Query: 181 IHEMLKAFFDQQQRMEVEWRQMMERRAQERQLFEEEWRQRMEKLERERLLVEQAWREKEE 240
+ ++L+ F Q +ME EWR E + ER+ E+EWR+RM +LE ER E+ W E+EE
Sbjct: 227 LKDILEEFMRQTVKMEKEWRDAWEMKEIEREKREKEWRRRMAELEEERAATERRWMEREE 286
Query: 241 QRRIREESRAERRDALLTTLLTKLINQNN 269
+RR+REE+RA++RD+L+ LL +L +N
Sbjct: 287 ERRLREEARAQKRDSLIDALLNRLNRDHN 315
>sp|Q8IWY8|ZSC29_HUMAN Zinc finger and SCAN domain-containing protein 29 OS=Homo sapiens
GN=ZSCAN29 PE=1 SV=2
Length = 852
Score = 64.7 bits (156), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 74/175 (42%), Gaps = 14/175 (8%)
Query: 13 AVQWGNEETRDLIVIRGETE--RDLVGIKRNKTIWEIVSVKLRERGYSRTPDQCKCKWKN 70
V WG EETR L+ I +TE L RN ++ V+ +LRE G+ RT +QC+ K+K
Sbjct: 245 GVHWGYEETRTLLAILSQTEFYEALRNCHRNSQVYGAVAERLREYGFLRTLEQCRTKFKG 304
Query: 71 LVNRYKGKETSDPDSGRQCPFFNELHAVFTERAKNMQRLLAESEAGSMQAKKRFKRLNAD 130
L Y+ ++ P CPFF E+ A+ + + + + ++A L
Sbjct: 305 LQKSYRKVKSGHPP--ETCPFFEEMEALMSAQVIAL-------PSNGLEAAASHSGLVGS 355
Query: 131 ELSDEEDDDEEQSEEEEEEEERPARGNSRKRKIERNVSDK---SPRATSGTAGIH 182
+ EE EE EE +S +E D +P G+H
Sbjct: 356 DAETEEPGQRGWQHEEGAEEAVAQESDSDDMDLEATPQDPNSAAPVVFRSPGGVH 410
Score = 61.6 bits (148), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 13 AVQWGNEETRDLIVIRGETE--RDLVGIKRNKTIWEIVSVKLRERGYSRTPDQCKCKWKN 70
V WG EET+ + I ET+ L RN ++ V+ +L E G+ RTP+QC+ K+K+
Sbjct: 408 GVHWGYEETKTYLAILSETQFYEALRNCHRNSQLYGAVAERLWEYGFLRTPEQCRTKFKS 467
Query: 71 LVNRY-KGKETSDPDSGRQCPFFNELHAVFTERA 103
L Y K K P++ CPFF E+ A+ + R
Sbjct: 468 LQTSYRKVKNGQAPET---CPFFEEMDALVSVRV 498
>sp|B2KFW1|ZSC20_MOUSE Zinc finger and SCAN domain-containing protein 20 OS=Mus musculus
GN=Zscan20 PE=2 SV=2
Length = 1030
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 82/179 (45%), Gaps = 24/179 (13%)
Query: 13 AVQWGNEETRDLIVIRGETERD--LVGIKRNKTIWEIVSVKLRERGYSRTPDQCKCKWKN 70
V WG EET+ + I E+ L +N+ ++ ++ +LR RG+ RT +QC+ + KN
Sbjct: 315 GVHWGYEETKTFLAILSESPFSEKLQTCHQNRQVYRAIAERLRARGFLRTLEQCRYRVKN 374
Query: 71 LVNRYKGKETSDPDSGRQCPFFNELHAVFTERAKNMQRLLAESEAGSMQAKKRFKRLNAD 130
L+ Y+ + S P CPF+ EL A+ RA+ R + G +A RL
Sbjct: 375 LLRNYRKAKNSHPPG--TCPFYEELEALV--RARTAIR---RTSGGPGEAVA-LPRLGD- 425
Query: 131 ELSDEEDDDEEQSEEEEEEEERPARGNSRKRKIERNVSDKSPRATSGT-------AGIH 182
SD E DD+++ E EE G+ + S + PR G AG+H
Sbjct: 426 --SDTEMDDQDEGSWEPEETVEDCSGSG----LAAEESLQGPRIAGGPALLQSRIAGVH 478
Score = 57.4 bits (137), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 71/147 (48%), Gaps = 23/147 (15%)
Query: 13 AVQWGNEETRDLIVIRGETE--RDLVGIKRNKTIWEIVSVKLRERGYSRTPDQCKCKWKN 70
V WG EET+ + I E+ L +N I+ ++ +LR G+ RT +QC+ ++KN
Sbjct: 476 GVHWGFEETKVFLAILSESPFAEKLRTCHQNSQIYRAIAERLRALGFLRTLEQCRYRFKN 535
Query: 71 LVNRYKGKETSDPDSGRQCPFFNELHAVFTERAKNMQRLL-----AESEAGSMQAKKRFK 125
L+ Y+ ++S P CPF+ E+ ++ RA+ + R + A GS Q+
Sbjct: 536 LLRSYRKAKSSCPPG--TCPFYEEMDSLM--RARTVIRAVEMVGEATGLPGSGQS----- 586
Query: 126 RLNADELSDEEDDDEEQSEEEEEEEER 152
S E DD E E E+E+ R
Sbjct: 587 -------STEADDQEAWGEMEDEDAVR 606
>sp|Q9LU92|TGT4_ARATH Trihelix transcription factor GT-4 OS=Arabidopsis thaliana GN=GT-4
PE=2 SV=1
Length = 372
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 8/115 (6%)
Query: 13 AVQWGNEETRDLIVIRGETERDLVGIKRNKTIWEIVSVKLRERGYSRTPDQCKCKWKNLV 72
A W +ETR LI +R E + K NK +WE +S K+RE+G+ R+P C KW+N++
Sbjct: 52 AETWAQDETRTLISLRREMDNLFNTSKSNKHLWEQISKKMREKGFDRSPSMCTDKWRNIL 111
Query: 73 NRYK------GKETSDPDSGRQCPFFNELHAVFTERAKNMQRLLAESEAGSMQAK 121
+K K TS + ++NE+ +F ER K + + + AK
Sbjct: 112 KEFKKAKQHEDKATS--GGSTKMSYYNEIEDIFRERKKKVAFYKSPATTTPSSAK 164
>sp|Q9FX53|TGT1_ARATH Trihelix transcription factor GT-1 OS=Arabidopsis thaliana GN=GT-1
PE=1 SV=1
Length = 406
Score = 60.8 bits (146), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 3/143 (2%)
Query: 13 AVQWGNEETRDLIVIRGETERDLVGIKRNKTIWEIVSVKLRERGYSRTPDQCKCKWKNLV 72
A W +ETR LI+ R + K NK +WE +S K+RE+G+ R+P C KW+NL+
Sbjct: 84 AETWVQDETRSLIMFRRGMDGLFNTSKSNKHLWEQISSKMREKGFDRSPTMCTDKWRNLL 143
Query: 73 NRYKGKETSDPDSGR-QCPFFNELHAVFTERAKNMQRLLAESEAGSMQAKKRFKRLNADE 131
+K + D +G + ++ E+ + ER+K + + + +
Sbjct: 144 KEFKKAKHHDRGNGSAKMSYYKEIEDILRERSKKVTPPQYNKSPNTPPTSAKVDSFM--Q 201
Query: 132 LSDEEDDDEEQSEEEEEEEERPA 154
+D+ DD S E RPA
Sbjct: 202 FTDKGFDDTSISFGSVEANGRPA 224
>sp|P17040|ZSC20_HUMAN Zinc finger and SCAN domain-containing protein 20 OS=Homo sapiens
GN=ZSCAN20 PE=2 SV=3
Length = 1043
Score = 60.8 bits (146), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 84/190 (44%), Gaps = 30/190 (15%)
Query: 13 AVQWGNEETRDLIVIRGETERD--LVGIKRNKTIWEIVSVKLRERGYSRTPDQCKCKWKN 70
V WG EET+ + I E+ L +N+ ++ ++ +LR RG+ RT +QC+ + KN
Sbjct: 323 GVHWGYEETKTFLAILSESPFSEKLRTCHQNRQVYRAIAEQLRARGFLRTLEQCRYRVKN 382
Query: 71 LVNRYKGKETSDPDSGRQCPFFNELHAVFTERAKNMQRLLAESEAGSMQAKKRFKRLNAD 130
L+ Y+ ++S P CPF+ EL A+ RA+ R A G A R
Sbjct: 383 LLRNYRKAKSSHPPG--TCPFYEELEALV--RARTAIR--ATDGPGEAVALPRLG----- 431
Query: 131 ELSDEEDDDEEQSEEEEEEEERPARGNSRKRKIERNV-SDKSPRATSG-------TAGIH 182
SD E D++E+ + EE G NV S + PR AG+H
Sbjct: 432 -YSDAEMDEQEEGGWDPEEMAEDCNGAGLV-----NVESTQGPRIAGAPALFQSRIAGVH 485
Query: 183 ---EMLKAFF 189
E KAF
Sbjct: 486 WGYEETKAFL 495
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 13 AVQWGNEETRDLIVIRGETERD--LVGIKRNKTIWEIVSVKLRERGYSRTPDQCKCKWKN 70
V WG EET+ + I E+ L +N ++ ++ +L G+ RT +QC+ ++KN
Sbjct: 483 GVHWGYEETKAFLAILSESPFSEKLRTCHQNSQVYRAIAERLCALGFLRTLEQCRYRFKN 542
Query: 71 LVNRYKGKETSDPDSGRQCPFFNELHAVFTERA 103
L+ Y+ ++S P CPF+ EL ++ RA
Sbjct: 543 LLRSYRKAKSSHPPG--TCPFYEELDSLMRARA 573
>sp|Q39117|TGT2_ARATH Trihelix transcription factor GT-2 OS=Arabidopsis thaliana GN=GT-2
PE=2 SV=1
Length = 575
Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 5/102 (4%)
Query: 8 SAHAQAVQWGNEETRDLIVIRGETERDLVGIKRNKTIWEIVSVKLRERGYSRTPDQCKCK 67
S + +W E LI IR E + +WE +S +R GY+R+ +CK K
Sbjct: 390 SVSPSSSRWPKTEVEALIRIRKNLEANYQENGTKGPLWEEISAGMRRLGYNRSAKRCKEK 449
Query: 68 WKNLVNRY--KGKETSD--PDSGRQCPFFNELHAVFTERAKN 105
W+N +N+Y K KE++ P + CP+F++L A++ ER K+
Sbjct: 450 WEN-INKYFKKVKESNKKRPLDSKTCPYFHQLEALYNERNKS 490
Score = 40.8 bits (94), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 16 WGNEETRDLIVIRGETERDLVGIKRNKTIWEIVSVKLRERGYSRTPDQCKCKWKNLVNRY 75
W ET L+ IR E ++ +WE +S K+ E GY R+ +CK K++N+ +
Sbjct: 42 WPRPETLALLRIRSEMDKAFRDSTLKAPLWEEISRKMMELGYKRSSKKCKEKFENVYKYH 101
Query: 76 K-GKETSDPDS-GRQCPFFNELHAV 98
K KE S G+ FF EL A
Sbjct: 102 KRTKEGRTGKSEGKTYRFFEELEAF 126
>sp|Q63HK3|ZKSC2_HUMAN Zinc finger protein with KRAB and SCAN domains 2 OS=Homo sapiens
GN=ZKSCAN2 PE=1 SV=2
Length = 967
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
Query: 13 AVQWGNEETRDLIVIRGET--ERDLVGIKRNKTIWEIVSVKLRERGYSRTPDQCKCKWKN 70
V WG EET+ + I ET L R ++ V+ +LRE G+ RTP+QC+ K+K+
Sbjct: 497 GVHWGYEETKTFLDILRETRFYEALQACHRKSKLYGAVAEQLRECGFLRTPEQCRTKFKS 556
Query: 71 LVNRYKGKETSDPDSGRQCPFFNELHAVFTERA 103
L Y ++ + C F+ E+ A+ RA
Sbjct: 557 LQKSY--RKVKNGHVLESCAFYKEMDALINSRA 587
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 13 AVQWGNEETRDLIVIRGET--ERDLVGIKRNKTIWEIVSVKLRERGYSRTPDQCKCKWKN 70
V W EET+ + I E+ L RN ++ V+ LRE G+ RTP+QC+ K+K+
Sbjct: 340 GVHWSYEETKTFLAILKESRFYETLQACPRNSQVYGAVAEWLRECGFLRTPEQCRTKFKS 399
Query: 71 LVNRYKGKETSDPDSGRQCPFFNELHAVFTERAK 104
L Y ++ + C FF ++ A+ A+
Sbjct: 400 LQKSY--RKVRNGHMLEPCAFFEDMDALLNPAAR 431
>sp|Q8H181|GTL2_ARATH Trihelix transcription factor GTL2 OS=Arabidopsis thaliana
GN=At5g28300 PE=2 SV=1
Length = 619
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 15/100 (15%)
Query: 16 WGNEETRDLIVIR----------GETERDLVGIKRNKTIWEIVSVKLRERGYSRTPDQCK 65
W +E LI IR + E L + +WE +S K+ E GY R+ +CK
Sbjct: 460 WPKDEVLALINIRRSISNMNDDDHKDENSLSTSSKAVPLWERISKKMLEIGYKRSAKRCK 519
Query: 66 CKWKNLVNRY--KGKETSD--PDSGRQCPFFNELHAVFTE 101
KW+N +N+Y K K+ + P R CP+F++L A++++
Sbjct: 520 EKWEN-INKYFRKTKDVNKKRPLDSRTCPYFHQLTALYSQ 558
>sp|Q9C882|GTL1_ARATH Trihelix transcription factor GTL1 OS=Arabidopsis thaliana GN=GTL1
PE=1 SV=2
Length = 587
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 16 WGNEETRDLIVIRGETERDLVGIKRNKTIWEIVSVKLRERGYSRTPDQCKCKWKNLVNRY 75
W E LI +R E +WE +S ++ GY+R +CK KW+N+ Y
Sbjct: 436 WPKAEILALINLRSGMEPRYQDNVPKGLLWEEISTSMKRMGYNRNAKRCKEKWENINKYY 495
Query: 76 KGKETSD---PDSGRQCPFFNELHAVF 99
K + S+ P + CP+F+ L ++
Sbjct: 496 KKVKESNKKRPQDAKTCPYFHRLDLLY 522
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 16 WGNEETRDLIVIRGETERDLVGIKRNKTIWEIVSVKLRERGYSRTPDQCKCKWKNLVNRY 75
W EET L+ IR + + +WE VS KL E GY R+ +CK K++N+ Y
Sbjct: 63 WPREETLALLRIRSDMDSTFRDATLKAPLWEHVSRKLLELGYKRSSKKCKEKFENVQKYY 122
Query: 76 K-GKET-SDPDSGRQCPFFNELHAVFT 100
K KET G+ FF++L A+ T
Sbjct: 123 KRTKETRGGRHDGKAYKFFSQLEALNT 149
>sp|Q9NX65|ZN434_HUMAN Zinc finger protein 434 OS=Homo sapiens GN=ZNF434 PE=2 SV=2
Length = 485
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 11 AQAVQWGNEETRDLIVIRGETE--RDLVGIKRNKTIWEIVSVKLRERGYSRTPDQCKCKW 68
A V WG EET+ L+ I ++ L ++N I+ ++ L E+G+ RTP+QC+ K+
Sbjct: 39 ATGVPWGYEETKTLLAILSSSQFYGKLQTCQQNSQIYRAMAEGLWEQGFLRTPEQCRTKF 98
Query: 69 KNLVNRY-KGKETSDPDSGRQCPFFNELHAV 98
K+L Y K + P+ C F+ E++A+
Sbjct: 99 KSLQLSYRKVRRGRVPEP---CIFYEEMNAL 126
>sp|Q8IDX6|RBP2A_PLAF7 Reticulocyte-binding protein 2 homolog a OS=Plasmodium falciparum
(isolate 3D7) GN=PF13_0198 PE=3 SV=1
Length = 3130
Score = 36.6 bits (83), Expect = 0.21, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 70/147 (47%), Gaps = 24/147 (16%)
Query: 110 LAESEAGSMQAKKRFKRLNADELSDEEDDDEEQSEEEEEEEERPARGNSRKRKIERNVSD 169
L E +Q ++ KR + L E + +EQ ++EEE + + ++ ++R +
Sbjct: 2739 LKRQEQERLQKEEELKRQEQERL---EREKQEQLQKEEELKRQEQERLQKEEALKRQEQE 2795
Query: 170 KSPRATSGTAGIHEMLKAFFDQQQRMEVEWRQMMERRAQERQLFEEEW-RQRMEKLERER 228
+ +++ ++ + ++ +ER QE+ EEE RQ E+L++E
Sbjct: 2796 R------------------LQKEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQKEE 2837
Query: 229 LL--VEQAWREKEEQRRIREESRAERR 253
L EQ +KEE+ + +E+ R ER+
Sbjct: 2838 ALKRQEQERLQKEEELKRQEQERLERK 2864
Score = 32.3 bits (72), Expect = 3.6, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 44/67 (65%), Gaps = 5/67 (7%)
Query: 191 QQQRMEVEWRQMMERRAQERQLFEEEW-RQRMEKLERERL--LVEQAWREKEEQRRIREE 247
+Q+R++ E + ++R+ QER EEE RQ E+LERE+ L ++ +++EQ R+++E
Sbjct: 2779 EQERLQKE--EALKRQEQERLQKEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQKE 2836
Query: 248 SRAERRD 254
+R++
Sbjct: 2837 EALKRQE 2843
Score = 32.3 bits (72), Expect = 4.0, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 5/55 (9%)
Query: 203 MERRAQERQLFEEEW-RQRMEKLERERLLVEQAWREKEEQRRIREESRAERRDAL 256
++R+ QER EEE RQ E+LERE+ Q +KEE+ + +E+ R ++ +AL
Sbjct: 2739 LKRQEQERLQKEEELKRQEQERLEREK----QEQLQKEEELKRQEQERLQKEEAL 2789
>sp|Q9LZS0|PTL_ARATH Trihelix transcription factor PTL OS=Arabidopsis thaliana GN=PTL
PE=2 SV=1
Length = 591
Score = 36.2 bits (82), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Query: 16 WGNEETRDLIVIRGETERDLVGIKRNKTIWEIVS-VKLRERGYSRTPDQCKCKWKNLVNR 74
W +ET L+ IR + + +W+ VS + E GY R+ +C+ K++NL
Sbjct: 120 WPRQETLTLLEIRSRLDHKFKEANQKGPLWDEVSRIMSEEHGYQRSGKKCREKFENLYKY 179
Query: 75 YKGKETSDPDSGRQ----CPFFNELHAVFTE 101
Y ++T + +GRQ FF +L A++ +
Sbjct: 180 Y--RKTKEGKAGRQDGKHYRFFRQLEALYGD 208
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.126 0.355
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,577,558
Number of Sequences: 539616
Number of extensions: 4212183
Number of successful extensions: 100332
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1323
Number of HSP's successfully gapped in prelim test: 1946
Number of HSP's that attempted gapping in prelim test: 57031
Number of HSP's gapped (non-prelim): 21859
length of query: 270
length of database: 191,569,459
effective HSP length: 116
effective length of query: 154
effective length of database: 128,974,003
effective search space: 19861996462
effective search space used: 19861996462
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)