Query 024279
Match_columns 270
No_of_seqs 140 out of 1217
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 03:24:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024279.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024279hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03145 Protein phosphatase 2 100.0 6.6E-49 1.4E-53 340.9 29.5 243 16-261 64-335 (365)
2 PTZ00224 protein phosphatase 2 100.0 1.8E-44 3.8E-49 314.2 29.9 237 13-259 18-274 (381)
3 COG0631 PTC1 Serine/threonine 100.0 6.1E-45 1.3E-49 305.1 20.9 235 13-259 4-255 (262)
4 KOG0697 Protein phosphatase 1B 100.0 5E-44 1.1E-48 286.5 20.9 247 13-262 18-297 (379)
5 KOG0698 Serine/threonine prote 100.0 2E-41 4.2E-46 292.8 28.6 242 19-261 42-309 (330)
6 PF00481 PP2C: Protein phospha 100.0 1.2E-43 2.7E-48 297.7 12.4 229 18-248 1-254 (254)
7 cd00143 PP2Cc Serine/threonine 100.0 3.3E-40 7.1E-45 276.7 26.5 234 18-255 2-254 (254)
8 PRK14559 putative protein seri 100.0 1.4E-40 3.1E-45 304.7 23.5 237 15-262 373-641 (645)
9 smart00332 PP2Cc Serine/threon 100.0 6.6E-39 1.4E-43 269.2 26.9 234 16-253 5-255 (255)
10 KOG0699 Serine/threonine prote 100.0 2.4E-35 5.1E-40 244.7 18.8 165 100-267 330-513 (542)
11 KOG0700 Protein phosphatase 2C 100.0 5.3E-33 1.2E-37 235.5 18.7 216 28-243 82-378 (390)
12 KOG1379 Serine/threonine prote 99.9 3.7E-24 8E-29 176.1 19.7 200 28-255 88-330 (330)
13 KOG1323 Serine/threonine phosp 99.9 2.1E-24 4.6E-29 177.9 17.3 220 36-257 142-488 (493)
14 PF13672 PP2C_2: Protein phosp 99.9 8.6E-22 1.9E-26 160.9 11.2 174 21-224 2-193 (212)
15 KOG0618 Serine/threonine phosp 99.9 8.5E-21 1.9E-25 175.2 16.0 240 15-260 520-776 (1081)
16 smart00331 PP2C_SIG Sigma fact 99.8 4.3E-19 9.4E-24 142.9 19.2 176 19-240 6-192 (193)
17 TIGR02865 spore_II_E stage II 99.8 8.3E-19 1.8E-23 166.4 18.8 198 13-256 548-764 (764)
18 PF07228 SpoIIE: Stage II spor 99.7 1.6E-15 3.4E-20 122.0 18.0 175 37-256 3-193 (193)
19 COG2208 RsbU Serine phosphatas 99.0 1.2E-07 2.6E-12 83.9 20.2 181 30-256 161-366 (367)
20 PRK10693 response regulator of 91.4 2 4.4E-05 36.9 9.6 95 30-132 149-259 (303)
21 COG2168 DsrH Uncharacterized c 74.8 1.7 3.6E-05 30.3 1.2 49 195-247 22-70 (96)
22 PF09436 DUF2016: Domain of un 62.2 5 0.00011 26.5 1.4 25 195-219 23-47 (72)
23 COG3700 AphA Acid phosphatase 50.3 34 0.00074 27.0 4.4 45 199-243 71-130 (237)
24 PF01436 NHL: NHL repeat; Int 34.7 70 0.0015 16.4 3.5 21 107-127 8-28 (28)
25 PF06972 DUF1296: Protein of u 31.4 67 0.0014 20.3 2.7 27 212-238 18-45 (60)
26 PF04077 DsrH: DsrH like prote 28.6 14 0.00029 25.4 -0.7 25 199-223 19-43 (88)
27 TIGR03735 PRTRC_A PRTRC system 25.1 1.9E+02 0.0041 23.2 5.0 49 195-243 22-91 (192)
28 PF14014 DUF4230: Protein of u 23.8 3E+02 0.0065 20.7 6.0 40 185-224 75-114 (157)
29 cd00534 DHNA_DHNTPE Dihydroneo 21.1 3.2E+02 0.0069 19.5 5.4 54 204-259 42-101 (118)
No 1
>PLN03145 Protein phosphatase 2c; Provisional
Probab=100.00 E-value=6.6e-49 Score=340.86 Aligned_cols=243 Identities=33% Similarity=0.517 Sum_probs=210.9
Q ss_pred eEEEEEEecccCCCCCCccC---C--------------CccEEEEEcCCCchHHHHHHHHHHHHHHHcCCCCcccHHHHH
Q 024279 16 QLVIYMHVTDGKRHAISNSS---Y--------------HVNLDRYKYGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAI 78 (270)
Q Consensus 16 ~~~~~~~s~~G~r~~neD~~---~--------------~~~~~~V~DG~GG~~~a~~a~~~~~~~l~~~~~~~~~~~~~l 78 (270)
.+.++..|++|.|+.|||++ . ...+|+|||||||+.++++|++.+.+.+.+.......+...|
T Consensus 64 ~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~~~~~~~~~al 143 (365)
T PLN03145 64 VVRSGAWADIGSRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDEDFPREIEKVV 143 (365)
T ss_pred ceEEEEEccccCCCCCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhhccchhHHHHH
Confidence 47889999999999999998 2 247899999999999999999999999887554445677889
Q ss_pred HHHHHHHhHHHHhhcc-CCCCCCCCeEEEEEEECCEEEEEEeccccEEEEeCCccccCCCCCCCCChhHHHHHHHcCCee
Q 024279 79 SETYQQTDVDFLESER-DTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVV 157 (270)
Q Consensus 79 ~~~~~~~~~~i~~~~~-~~~~~~gtT~~~~~i~~~~~~~a~vGDsr~~l~r~~~~~~lt~dh~~~~~~e~~~~~~~~g~~ 157 (270)
.++|.++++.+..... .....+|||+++++|.++++|++|+||||+|++|++++++||.||++.++.|++||...||.+
T Consensus 144 ~~af~~~d~~~~~~~~~~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~Gg~v 223 (365)
T PLN03145 144 SSAFLQTDTAFAEACSLDASLASGTTALAALVVGRSLVVANAGDCRAVLCRRGKAIEMSRDHKPMCSKERKRIEASGGYV 223 (365)
T ss_pred HHHHHHHhHHHHhhhccccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCCeEEEecCCCCCCCHHHHHHHHHcCCce
Confidence 9999999999876532 233458999999999999999999999999999999999999999999999999999999887
Q ss_pred eeCCceeecCeeecccccccccCCC-------ceeeeceEEEEEecCCCeEEEEEcCCCcCCCChHHHHHHH----HcCC
Q 024279 158 MWAGTWRVGGVLAMSRAFGNRMLKQ-------FVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALA----RTGE 226 (270)
Q Consensus 158 ~~~~~~~~~~~~~~tr~lG~~~~~~-------~~~~~p~~~~~~l~~~~d~lvl~SDGv~~~l~~~~i~~~~----~~~~ 226 (270)
. ..++.+.+++||+||+..++. .+.++|++..+++.+++.||||||||||++++++++.+++ ....
T Consensus 224 ~---~g~v~g~l~vTRalGD~~~k~~k~~~~~~vs~ePdv~~~~l~~~D~fLILaSDGLwdvls~ee~v~~i~~~l~~~~ 300 (365)
T PLN03145 224 Y---DGYLNGQLNVARALGDWHMEGMKGSDGGPLSAEPELMTTQLTEEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHN 300 (365)
T ss_pred e---cceECCccccccccccccccccccccCCCcceEEEEEEEECCCCCEEEEEeCCccccCcCHHHHHHHHHHHHhcCC
Confidence 5 346677788999999876642 3578999999999998778899999999999999975554 4456
Q ss_pred CHHHHHHHHHHHHHHcCCCCccEEEEEEccCCCCC
Q 024279 227 EPEIAARKLTETAFTRGSADNITCIVVRFHHVNED 261 (270)
Q Consensus 227 ~~~~~a~~l~~~a~~~~~~Dn~Tvivi~~~~~~~~ 261 (270)
+++++|+.|++.|+.+++.||+|||||+|+..+++
T Consensus 301 ~p~~aa~~Lv~~Al~rgs~DNITvIVV~l~~~~~~ 335 (365)
T PLN03145 301 DPVMCSKELVDEALKRKSGDNLAVVVVCFQSQPPP 335 (365)
T ss_pred CHHHHHHHHHHHHHhCCCCCCEEEEEEEeecCCCc
Confidence 89999999999999999999999999999985443
No 2
>PTZ00224 protein phosphatase 2C; Provisional
Probab=100.00 E-value=1.8e-44 Score=314.20 Aligned_cols=237 Identities=32% Similarity=0.533 Sum_probs=203.9
Q ss_pred eeceEEEEEEecccCCCCCCccC-----CCccEEEEEcCCCchHHHHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHhH
Q 024279 13 VSFQLVIYMHVTDGKRHAISNSS-----YHVNLDRYKYGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDV 87 (270)
Q Consensus 13 ~~~~~~~~~~s~~G~r~~neD~~-----~~~~~~~V~DG~GG~~~a~~a~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~ 87 (270)
.+..|.++..|.+|.|+.|||++ .+..+|+|||||||..+|+++++.+.+.+...... .....|.+++..+++
T Consensus 18 ~~~~~~~g~~s~~G~R~~nED~~~v~~~~~~~lfgVfDGHgG~~~S~~~~~~l~~~l~~~~~~--~~~~~l~~a~~~~d~ 95 (381)
T PTZ00224 18 GNSIFRCASACVNGYRESMEDAHLLYLTDDWGFFGVFDGHVNDECSQYLARAWPQALEKEPEP--MTDERMEELCLEIDE 95 (381)
T ss_pred CCccEEEEEEeCCCCCCCCCCeeEeccCCCceEEEEEeCCCcHHHHHHHHHHHHHHHHhcccc--ccHHHHHHHHHHHHH
Confidence 56689999999999999999997 45579999999999999999999988777543322 123458889999999
Q ss_pred HHHhhccCCCCCCCCeEEEEEEE-CCEEEEEEeccccEEEEeCCccccCCCCCCCCChhHHHHHHHcCCeeeeCCceeec
Q 024279 88 DFLESERDTYRDDGSTASTAILV-GNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVG 166 (270)
Q Consensus 88 ~i~~~~~~~~~~~gtT~~~~~i~-~~~~~~a~vGDsr~~l~r~~~~~~lt~dh~~~~~~e~~~~~~~~g~~~~~~~~~~~ 166 (270)
.+..... ..|||+++++|. +.+++++||||||+|++|+|++++||.||++.++.|+.||...+|.+. ..|+.
T Consensus 96 ~i~~~~~----~~GsTatv~lI~~~~~l~vaNVGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~gg~v~---~~Rv~ 168 (381)
T PTZ00224 96 EWMDSGR----EGGSTGTFCVIMKDVHLQVGNVGDSRVLVCRDGKLVFATEDHKPNNPGERQRIEACGGRVV---SNRVD 168 (381)
T ss_pred HHHhccc----CCCCeEEEEEEEECCEEEEEEcccceEEEEECCEEEEcccCCCCCCHHHHhHHHHccCEec---ccccc
Confidence 8875432 358999998886 679999999999999999999999999999999999999999998875 34677
Q ss_pred CeeecccccccccCC---------CceeeeceEEEEEecCCCeEEEEEcCCCcC-CCChHHHHHHHHc----CCCHHHHH
Q 024279 167 GVLAMSRAFGNRMLK---------QFVVAEPEIQDLEVDEGFELLVLASDGLWD-VVPNEDAVALART----GEEPEIAA 232 (270)
Q Consensus 167 ~~~~~tr~lG~~~~~---------~~~~~~p~~~~~~l~~~~d~lvl~SDGv~~-~l~~~~i~~~~~~----~~~~~~~a 232 (270)
+.+.+||+||+..+| +.+.++|++..+++.++ |+|||||||||+ .++++++.+++.. ..+++.+|
T Consensus 169 G~l~vTRalGd~~~K~~~~~~~~~~~v~~~Pdi~~~~l~~~-D~llLaSDGL~d~~ls~eEi~~iv~~~l~~~~~~~~aA 247 (381)
T PTZ00224 169 GDLAVSRAFGDRSFKVKGTGDYLEQKVIAVPDVTHLTCQSN-DFIILACDGVFEGNFSNEEVVAFVKEQLETCDDLAVVA 247 (381)
T ss_pred CceeeecccCCcccccccccccccCcceeeeEEEEEECCCC-CEEEEECCCcCcCccCHHHHHHHHHHHHhcCCCHHHHH
Confidence 889999999997544 23568999999999988 999999999999 7999999998863 46899999
Q ss_pred HHHHHHHHHcCCCCccEEEEEEccCCC
Q 024279 233 RKLTETAFTRGSADNITCIVVRFHHVN 259 (270)
Q Consensus 233 ~~l~~~a~~~~~~Dn~Tvivi~~~~~~ 259 (270)
+.|++.|+.+++.||+||||+++...+
T Consensus 248 ~~Lv~~A~~rGs~DNITvIvV~~~~~~ 274 (381)
T PTZ00224 248 GRVCDEAIRRGSKDNISCLIVQLKDGA 274 (381)
T ss_pred HHHHHHHHhcCCCCCEEEEEEEeeCCC
Confidence 999999999999999999999999765
No 3
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-45 Score=305.05 Aligned_cols=235 Identities=31% Similarity=0.422 Sum_probs=204.0
Q ss_pred eeceEEEEEEecccC-CCCCCccC---CC-----ccEEEEEcCCCchHHHHHHHHHHHHHHHcCC----C-Cccc-HHHH
Q 024279 13 VSFQLVIYMHVTDGK-RHAISNSS---YH-----VNLDRYKYGHGGSRAAEYLKEHLFENLLKHP----Q-FMTD-TKLA 77 (270)
Q Consensus 13 ~~~~~~~~~~s~~G~-r~~neD~~---~~-----~~~~~V~DG~GG~~~a~~a~~~~~~~l~~~~----~-~~~~-~~~~ 77 (270)
..+.+.++..|+.|. |..|||++ .. ..+++|||||||+.++++|++.+++.|.+.. . .... ..+.
T Consensus 4 ~~~~~~~~~~s~~g~~R~~NeD~~~~~~~~~~~~~~l~~V~DG~GGh~~ge~aS~~~v~~l~~~~~~~~~~~~~~~~~~~ 83 (262)
T COG0631 4 GILSLKVAGLSDVGTVRKHNEDAFLIKPNENGNLLLLFAVADGMGGHAAGEVASKLAVEALARLFDETNFNSLNESLEEL 83 (262)
T ss_pred ccceeeeeeeccCCCccCCCCcceeeccccCCcceeEEEEEeCccchhHHHHHHHHHHHHHHHHHHhccccccchhHHHH
Confidence 346788999999999 99999999 11 3599999999999999999999988886531 1 1111 5788
Q ss_pred HHHHHHHHhHHHHhhc--cCCCCCCCCeEEEEEEECCEEEEEEeccccEEEEeCCccccCCCCCCCCChhHHHHHHHcCC
Q 024279 78 ISETYQQTDVDFLESE--RDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGG 155 (270)
Q Consensus 78 l~~~~~~~~~~i~~~~--~~~~~~~gtT~~~~~i~~~~~~~a~vGDsr~~l~r~~~~~~lt~dh~~~~~~e~~~~~~~~g 155 (270)
+.+.+..++..+.... .....++|||++++++.++++++|||||||+|++|++.++++|.||++.+..++.++...++
T Consensus 84 l~~~~~~~n~~i~~~~~~~~~~~~mgtTl~~~~~~~~~l~~a~vGDSR~yl~~~~~~~~lT~DH~~~~~~~~~~~~~~~~ 163 (262)
T COG0631 84 LKEAILKANEAIAEEGQLNEDVRGMGTTLVLLLIRGNKLYVANVGDSRAYLLRDGELKQLTEDHSLVNRLEQRGIITPEE 163 (262)
T ss_pred HHHHHHHHHHHHHHhhhcccccCCCceeEEEEEEECCeEEEEEccCCeEEEEcCCceEEeccCCcHHHHHHHhcCCCHHH
Confidence 9999999999998874 35667899999999999999999999999999999999999999999999888877655554
Q ss_pred eeeeCCceeecCeeecccccccccCCCceeeeceEEEEEecCCCeEEEEEcCCCcCCCChHHHHHHHHcCCCHHHHHHHH
Q 024279 156 VVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGEEPEIAARKL 235 (270)
Q Consensus 156 ~~~~~~~~~~~~~~~~tr~lG~~~~~~~~~~~p~~~~~~l~~~~d~lvl~SDGv~~~l~~~~i~~~~~~~~~~~~~a~~l 235 (270)
.... +..+.+||+||.... ..|++...++.++ ++|||||||||+.++++++.++++...+++..++.|
T Consensus 164 ~~~~------~~~~~ltralG~~~~-----~~p~~~~~~~~~~-d~llL~SDGl~d~v~~~~i~~il~~~~~~~~~~~~l 231 (262)
T COG0631 164 ARSH------PRRNALTRALGDFDL-----LEPDITELELEPG-DFLLLCSDGLWDVVSDDEIVDILKNSETPQEAADKL 231 (262)
T ss_pred HHhC------ccchhhhhhcCCCcc-----cceeEEEEEcCCC-CEEEEECCCCccCcCHHHHHHHHhcCCCHHHHHHHH
Confidence 4443 334489999999753 8899999999999 999999999999999999999999889999999999
Q ss_pred HHHHHHcCCCCccEEEEEEccCCC
Q 024279 236 TETAFTRGSADNITCIVVRFHHVN 259 (270)
Q Consensus 236 ~~~a~~~~~~Dn~Tvivi~~~~~~ 259 (270)
++.|+.+++.||+|+|++++....
T Consensus 232 i~~a~~~g~~DNiT~ilv~~~~~~ 255 (262)
T COG0631 232 IELALEGGGPDNITVVLVRLNGEG 255 (262)
T ss_pred HHHHHhcCCCCceEEEEEEeeccc
Confidence 999999999999999999998765
No 4
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]
Probab=100.00 E-value=5e-44 Score=286.54 Aligned_cols=247 Identities=31% Similarity=0.474 Sum_probs=221.0
Q ss_pred eeceEEEEEEecccCCCCCCccC----------CCccEEEEEcCCCchHHHHHHHHHHHHHHHcCCCC--------cccH
Q 024279 13 VSFQLVIYMHVTDGKRHAISNSS----------YHVNLDRYKYGHGGSRAAEYLKEHLFENLLKHPQF--------MTDT 74 (270)
Q Consensus 13 ~~~~~~~~~~s~~G~r~~neD~~----------~~~~~~~V~DG~GG~~~a~~a~~~~~~~l~~~~~~--------~~~~ 74 (270)
..+.+.|+.+|.+|+|-.+||++ .+|.+|+|+|||.|+..|.++++.+++.+.....+ .++.
T Consensus 18 ~GNglryg~SSMQGWR~eMEDah~A~~~l~~~l~dWSfFAVfDGHAGs~va~~c~~hLlehi~sse~F~~~~k~gsv~~~ 97 (379)
T KOG0697|consen 18 EGNGLRYGVSSMQGWRVEMEDAHTAVAGLPSPLEDWSFFAVFDGHAGSQVANHCAEHLLEHIISSEEFRGMTKNGSVENV 97 (379)
T ss_pred cCCceeeeeccccchhhhhhhhhhhhhcCCCCccCceEEEEEcCccchHHHHHHHHHHHHHhhhhHHHhhhccCCcHHHH
Confidence 56789999999999999999999 89999999999999999999999999998764433 2367
Q ss_pred HHHHHHHHHHHhHHHHhh--ccCCCCCCCCeEEEEEEECCEEEEEEeccccEEEEeCCccccCCCCCCCCChhHHHHHHH
Q 024279 75 KLAISETYQQTDVDFLES--ERDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIEN 152 (270)
Q Consensus 75 ~~~l~~~~~~~~~~i~~~--~~~~~~~~gtT~~~~~i~~~~~~~a~vGDsr~~l~r~~~~~~lt~dh~~~~~~e~~~~~~ 152 (270)
...++..|.++.+.+... ......++|+|++.+++...++|++|+||||+.+.|+|+...-|+||.|.++.|++||+.
T Consensus 98 ~~GIrtGFL~iDE~mr~~~~~~~~~drsGsTAVcv~vsp~h~y~~NcGDSRavl~rng~~~f~TqDHKP~~p~EkeRIqn 177 (379)
T KOG0697|consen 98 EKGIRTGFLSIDEIMRTLSDISKGSDRSGSTAVCVFVSPTHIYIINCGDSRAVLCRNGEVVFSTQDHKPYLPKEKERIQN 177 (379)
T ss_pred HhhHhhcceeHHHHHhhhhhhhcccccCCceEEEEEecCceEEEEecCcchhheecCCceEEeccCCCCCChHHHHHHhc
Confidence 788888888887766544 222334489999999999999999999999999999999999999999999999999999
Q ss_pred cCCeeeeCCceeecCeeecccccccccCC---------CceeeeceEEEEEecCCCeEEEEEcCCCcCCCChHHHHHHHH
Q 024279 153 AGGVVMWAGTWRVGGVLAMSRAFGNRMLK---------QFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALAR 223 (270)
Q Consensus 153 ~~g~~~~~~~~~~~~~~~~tr~lG~~~~~---------~~~~~~p~~~~~~l~~~~d~lvl~SDGv~~~l~~~~i~~~~~ 223 (270)
.||..- ..|++|.+.++|+||++.+| +.++++|++........|+||||++||+||.++++++.++++
T Consensus 178 AGGSVM---IqRvNGsLAVSRAlGDydyK~v~~kgp~eQlVSPEPev~~~~R~eedeFivlACDGIwDVMtneelcefv~ 254 (379)
T KOG0697|consen 178 AGGSVM---IQRVNGSLAVSRALGDYDYKNVPGKGPTEQLVSPEPEVYIIERSEEDEFIVLACDGIWDVMTNEELCEFVK 254 (379)
T ss_pred CCCeEE---EEEecceeeeehhccCcccccCCCCCchhcccCCCCceEEeeccccCcEEEEEccchhhhcccHHHHHHHH
Confidence 999887 56888999999999999998 579999999999888888999999999999999999999997
Q ss_pred c----CCCHHHHHHHHHHHHHHcCCCCccEEEEEEccCCCCCC
Q 024279 224 T----GEEPEIAARKLTETAFTRGSADNITCIVVRFHHVNEDP 262 (270)
Q Consensus 224 ~----~~~~~~~a~~l~~~a~~~~~~Dn~Tvivi~~~~~~~~~ 262 (270)
. ..+....|+.+++.++.+|+.||+|+|++.|-+.|...
T Consensus 255 sRl~Vt~dL~~vcn~VvDtCLhKGSRDNMsivlvcfp~APkv~ 297 (379)
T KOG0697|consen 255 SRLEVTSDLEEVCNDVVDTCLHKGSRDNMSIVLVCFPGAPKVS 297 (379)
T ss_pred hhheecccHHHHHHHHHHHHHhccCccCceEEEEecCCCCCCC
Confidence 6 57899999999999999999999999999998766543
No 5
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-41 Score=292.84 Aligned_cols=242 Identities=47% Similarity=0.704 Sum_probs=213.7
Q ss_pred EEEEecccCCCCCCccC-------------C-CccEEEEEcCCCchHHHHHHHHHHHHHHHcCCCCcc---cHHHHHHHH
Q 024279 19 IYMHVTDGKRHAISNSS-------------Y-HVNLDRYKYGHGGSRAAEYLKEHLFENLLKHPQFMT---DTKLAISET 81 (270)
Q Consensus 19 ~~~~s~~G~r~~neD~~-------------~-~~~~~~V~DG~GG~~~a~~a~~~~~~~l~~~~~~~~---~~~~~l~~~ 81 (270)
.+.++.+|.|..+||++ . ...+|||||||||..+|+++.+.+...+........ .....+.++
T Consensus 42 ~~~~~~~~~r~~med~~~~~~~~~~~~~~~~~~~~ffgVfDGHGG~~~A~~~~~~L~~~l~~~~~~~~~~~~~~~a~~~~ 121 (330)
T KOG0698|consen 42 GSLLSIRGRRRKMEDRHVQLPDFLEEDVGGEQDTAFFGVFDGHGGDLAAKFAAKHLHKNLLEQLAFPKDRQDVKDALRRA 121 (330)
T ss_pred eEEEecCCCCCccCcceeecccccccccCCCCceEEEEEEeCCCCHHHHHHHHHHHHHHHHhhhhcccchHHHHHHHHHH
Confidence 44457777799999988 2 478999999999999999999999999987665554 378899999
Q ss_pred HH-HHhHHHHhhccCCCCCCCCeEEEEEEECC-EEEEEEeccccEEEEeCC-ccccCCCCCCCCChhHHHHHHHcCCeee
Q 024279 82 YQ-QTDVDFLESERDTYRDDGSTASTAILVGN-HLYVANVGDSRTVISKAG-KAIPLSEDHKPNRCDERKRIENAGGVVM 158 (270)
Q Consensus 82 ~~-~~~~~i~~~~~~~~~~~gtT~~~~~i~~~-~~~~a~vGDsr~~l~r~~-~~~~lt~dh~~~~~~e~~~~~~~~g~~~ 158 (270)
|. +.+..+... .......|||++++++.++ ++|+||+||||+.|.+.| ...+||.||.|..+.|+.||...||.+.
T Consensus 122 F~~~~D~~~~~~-~~~~~~~gstav~~vi~~~~~l~vaN~GDSRaVl~~~~~~a~~Ls~DHkP~~~~E~~RI~~~GG~v~ 200 (330)
T KOG0698|consen 122 FLTKTDSEFLEK-REDNRSGGSTAVVALIKKGRKLYVANVGDSRAVLSRKGGVAVQLSVDHKPDREDERERIEAAGGRVS 200 (330)
T ss_pred HHHHHHHHHHhh-ccCCCCCcceeeeeeEecCCEEEEEEcCCCcEEEecCCCeeeeCCCCCCCCcHHHHHHHHHcCCEEE
Confidence 99 688888866 2223457888888888755 999999999999999866 7999999999999999999999999998
Q ss_pred eCC-ceeecCeeecccccccccCC-CceeeeceEEEEEecCCCeEEEEEcCCCcCCCChHHHHHHHHc----CCCHHHHH
Q 024279 159 WAG-TWRVGGVLAMSRAFGNRMLK-QFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALART----GEEPEIAA 232 (270)
Q Consensus 159 ~~~-~~~~~~~~~~tr~lG~~~~~-~~~~~~p~~~~~~l~~~~d~lvl~SDGv~~~l~~~~i~~~~~~----~~~~~~~a 232 (270)
.-. .+|+.|.++++|++|+..++ +.++++|++....+...++||||+||||||.+++++..++++. ..++..++
T Consensus 201 ~~~~~~Rv~G~LavsRa~GD~~~k~~~v~a~Pei~~~~~~~~deFLiLasDGiwDv~s~qeav~~V~~~~~~~~~~~~a~ 280 (330)
T KOG0698|consen 201 NWGGVWRVNGVLAVSRAFGDVELKSQGVIAEPEIQQVKINSDDEFLILASDGIWDVVSNQEAVDLVRDELASISSPLAAA 280 (330)
T ss_pred EcCCcceEeceEEEeeecCCHHhcCCcEecCCceEEEEcCCCCcEEEEeCCchhcccChHHHHHHHHHHhhccccHHHHH
Confidence 554 58999999999999999999 8899999999999999879999999999999999999999988 56899999
Q ss_pred HHHHHHHHHcCCCCccEEEEEEccCCCCC
Q 024279 233 RKLTETAFTRGSADNITCIVVRFHHVNED 261 (270)
Q Consensus 233 ~~l~~~a~~~~~~Dn~Tvivi~~~~~~~~ 261 (270)
..|...+..+++.||+|||||+|.+....
T Consensus 281 ~~l~~~a~~~~s~DnitvvvV~l~~~~~~ 309 (330)
T KOG0698|consen 281 KLLATEALSRGSKDNITVVVVRLKSSPKS 309 (330)
T ss_pred HHHHHHHhhcCCCCCeEEEEEEecCcccc
Confidence 99999999999999999999999987643
No 6
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=100.00 E-value=1.2e-43 Score=297.71 Aligned_cols=229 Identities=44% Similarity=0.631 Sum_probs=192.6
Q ss_pred EEEEEecccCCCCCCccC------------CCccEEEEEcCCCchHHHHHHHHHHHHHHHcCCCCc--ccHHHHHHHHHH
Q 024279 18 VIYMHVTDGKRHAISNSS------------YHVNLDRYKYGHGGSRAAEYLKEHLFENLLKHPQFM--TDTKLAISETYQ 83 (270)
Q Consensus 18 ~~~~~s~~G~r~~neD~~------------~~~~~~~V~DG~GG~~~a~~a~~~~~~~l~~~~~~~--~~~~~~l~~~~~ 83 (270)
.+++.+..|.|+.|||++ ....+|+|+|||||..++.+++..+.+.+....... ..+...+..+|.
T Consensus 1 ~~~~~~~~g~r~~~eD~~~~~~~~~~~~~~~~~~l~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~~~~~~~~~al~~a~~ 80 (254)
T PF00481_consen 1 DYGVSSMQGVRKEMEDRHLIIQNFNSNSGNDNVSLFGVFDGHGGSEAAEYASQNLPEFLKENLSFNDGNDIEEALRQAFL 80 (254)
T ss_dssp EEEEEEEECTSSSHHEEEEEEEEETCCTTEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CcCeecCCCCCCcccCEEEEecCccccCCCCCcEEEEEecCCCChhhHHHHHHHHHHHHHhhcccccccchhhcccceee
Confidence 367888899999999999 578899999999999999999999997776543222 257888999999
Q ss_pred H-HhHHHHhhccC-CCCCCCCeEEEEEEECCEEEEEEeccccEEEEeCCccc-cCCCCCCCCChhHHHHHHHcCCeeeeC
Q 024279 84 Q-TDVDFLESERD-TYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAI-PLSEDHKPNRCDERKRIENAGGVVMWA 160 (270)
Q Consensus 84 ~-~~~~i~~~~~~-~~~~~gtT~~~~~i~~~~~~~a~vGDsr~~l~r~~~~~-~lt~dh~~~~~~e~~~~~~~~g~~~~~ 160 (270)
. .+..+...... ....+|||+++++|.++++|+||+||||+|+++++... +||.||++.++.|++||.+.+|.+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vanvGDSravl~~~~~~~~~Lt~dH~~~~~~E~~RI~~~gg~v~~- 159 (254)
T PF00481_consen 81 AFTDESLYSDSENNESSKSGSTATVALIDGNKLYVANVGDSRAVLCRNGGIIKQLTRDHKPSNPDERERIRKAGGRVSE- 159 (254)
T ss_dssp HHHHHHHHHHHHHHTHTTSEEEEEEEEEETTEEEEEEESS-EEEEEETTEEEEESS---STTSHHHHHHHHHTT-GEEE-
T ss_pred ecccccccccccccccccccccccccccccceeEEEeeeeeeeeeeeccccccccccccccchhhccceeecccccccc-
Confidence 9 77777663211 45569999999999999999999999999999999888 99999999999999999999999887
Q ss_pred CceeecCeeecccccccccCCC----ceeeeceEEEEEecCCCeEEEEEcCCCcCCCChHHHHHHHHcCCC----HHHHH
Q 024279 161 GTWRVGGVLAMSRAFGNRMLKQ----FVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGEE----PEIAA 232 (270)
Q Consensus 161 ~~~~~~~~~~~tr~lG~~~~~~----~~~~~p~~~~~~l~~~~d~lvl~SDGv~~~l~~~~i~~~~~~~~~----~~~~a 232 (270)
..|+.+.+.+||+||+..+++ .+.++|++..+++.+++.|||||||||||+++++++.+++++..+ |+.+|
T Consensus 160 -~~rv~g~l~~sRalGd~~~k~~~~~~v~~~P~i~~~~l~~~d~flvlaSDGlwd~l~~~ei~~~v~~~~~~~~~~~~~a 238 (254)
T PF00481_consen 160 -NGRVNGVLAVSRALGDFDLKPPGKPGVIAEPDISEVDLTPDDEFLVLASDGLWDVLSNEEIVDIVRESLNSGRSPQEAA 238 (254)
T ss_dssp -TEEETTTBSSSB-EE-GGGTTCTSSSSB---EEEEEEEBTTEEEEEEE-HHHHTTSHHHHHHHHHHHHHHHHSHHHHHH
T ss_pred -chhhhhccccccccccccccccccceeeeecccccccccccceEEEEEcccccccCCHHHHHHHHHHHHhcCCcHHHHH
Confidence 888899999999999999998 899999999999999966999999999999999999999987544 99999
Q ss_pred HHHHHHHHHcCCCCcc
Q 024279 233 RKLTETAFTRGSADNI 248 (270)
Q Consensus 233 ~~l~~~a~~~~~~Dn~ 248 (270)
+.|++.|+++++.|||
T Consensus 239 ~~L~~~A~~~gs~DNi 254 (254)
T PF00481_consen 239 EKLVDEAIARGSKDNI 254 (254)
T ss_dssp HHHHHHHHHTTHHSHE
T ss_pred HHHHHHHHhcCCCCCC
Confidence 9999999999999996
No 7
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=3.3e-40 Score=276.66 Aligned_cols=234 Identities=40% Similarity=0.615 Sum_probs=204.6
Q ss_pred EEEEEecccCCCCCCccC-----C---CccEEEEEcCCCchHHHHHHHHHHHHHHHcCCCC-----cccHHHHHHHHHHH
Q 024279 18 VIYMHVTDGKRHAISNSS-----Y---HVNLDRYKYGHGGSRAAEYLKEHLFENLLKHPQF-----MTDTKLAISETYQQ 84 (270)
Q Consensus 18 ~~~~~s~~G~r~~neD~~-----~---~~~~~~V~DG~GG~~~a~~a~~~~~~~l~~~~~~-----~~~~~~~l~~~~~~ 84 (270)
.++..+..|.|+.|||++ . ++.+|+|+|||||+..++++++.+.+.+.+.... ...+...+..+|..
T Consensus 2 ~~~~~~~~g~r~~neD~~~~~~~~~~~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (254)
T cd00143 2 SAGVSDKGGDRKTNEDAVVIKPNLNNEDGGLFGVFDGHGGHAAGEFASKLLVEELLEELEETLTLSEEDIEEALRKAFLR 81 (254)
T ss_pred ceeeecCCCCCCCCcceEEEeccCCCCCcEEEEEEcCCChHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHH
Confidence 456677777899999999 2 6799999999999999999999999888764332 34567789999999
Q ss_pred HhHHHHhhcc--CCCCCCCCeEEEEEEECCEEEEEEeccccEEEEeCCccccCCCCCCCCChhHHHHHHHcCCeeeeCCc
Q 024279 85 TDVDFLESER--DTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGT 162 (270)
Q Consensus 85 ~~~~i~~~~~--~~~~~~gtT~~~~~i~~~~~~~a~vGDsr~~l~r~~~~~~lt~dh~~~~~~e~~~~~~~~g~~~~~~~ 162 (270)
+++.+..... .....+|||++++++..++++++|+||||+|++|+++++++|.||++.++.+..++...++... .
T Consensus 82 ~~~~l~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~~~~~~~~~~~lt~dh~~~~~~~~~~i~~~~~~~~---~ 158 (254)
T cd00143 82 ADEEILEEAQDEPDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNGEAVQLTKDHKPVNEEERERIEKAGGRVS---N 158 (254)
T ss_pred HHHHHHHhhhhccCCCCCCCcEEEEEEECCEEEEEEecCcEEEEEcCCceeEcCCCCCCcChHHHHHHHHcCCcEE---e
Confidence 9999987743 3455689999999999999999999999999999999999999999999889999999887654 3
Q ss_pred eeecCeeecccccccccCCCceeeeceEEEEEe-cCCCeEEEEEcCCCcCCCChHHHHHHHHcCC---CHHHHHHHHHHH
Q 024279 163 WRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEV-DEGFELLVLASDGLWDVVPNEDAVALARTGE---EPEIAARKLTET 238 (270)
Q Consensus 163 ~~~~~~~~~tr~lG~~~~~~~~~~~p~~~~~~l-~~~~d~lvl~SDGv~~~l~~~~i~~~~~~~~---~~~~~a~~l~~~ 238 (270)
.+.++...+||++|....++....+|++..+++ .++ |+|||||||||+++++++|.+++.... +++++++.|++.
T Consensus 159 ~~~~~~~~~t~~lG~~~~~~~~~~~~~~~~~~l~~~~-d~ill~SDG~~~~l~~~~i~~~~~~~~~~~~~~~~a~~l~~~ 237 (254)
T cd00143 159 GRVPGVLAVTRALGDFDLKPGVSAEPDVTVVKLTEDD-DFLILASDGLWDVLSNQEAVDIVRSELAKEDLQEAAQELVDL 237 (254)
T ss_pred CEEcCceeeccccCCccccCCEEcCCeEEEEEeCCCC-cEEEEECCCCeeccChHHHHHHHHHHhcccCHHHHHHHHHHH
Confidence 455567789999999877767789999999999 776 999999999999999999999998866 899999999999
Q ss_pred HHHcCCCCccEEEEEEc
Q 024279 239 AFTRGSADNITCIVVRF 255 (270)
Q Consensus 239 a~~~~~~Dn~Tvivi~~ 255 (270)
|..+++.||+|+|++++
T Consensus 238 a~~~~~~Dn~t~i~~~~ 254 (254)
T cd00143 238 ALRRGSHDNITVVVVRL 254 (254)
T ss_pred HHhCCCCCCEEEEEEeC
Confidence 99999999999999875
No 8
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=100.00 E-value=1.4e-40 Score=304.75 Aligned_cols=237 Identities=25% Similarity=0.252 Sum_probs=184.0
Q ss_pred ceEEEEEEecccC-CCCCCccC---C--------------CccEEEEEcCCCchHHHHHHHHHHHHHHHc----CCCCcc
Q 024279 15 FQLVIYMHVTDGK-RHAISNSS---Y--------------HVNLDRYKYGHGGSRAAEYLKEHLFENLLK----HPQFMT 72 (270)
Q Consensus 15 ~~~~~~~~s~~G~-r~~neD~~---~--------------~~~~~~V~DG~GG~~~a~~a~~~~~~~l~~----~~~~~~ 72 (270)
+.+.+++.|++|. |+.|||++ . ...+|+|||||||+.+++.|++.+++.|.+ ......
T Consensus 373 ~~l~~a~~Td~G~~R~~NEDa~~i~~~~~~~~~~~~~~~~~~~L~aVaDGmGGh~~GevAS~lAv~~L~~~~~~~~~~~~ 452 (645)
T PRK14559 373 VSLEDAGRTDVGRQRHHNEDYFGINTRIQKLENPHGRIVQARGLYILCDGMGGHAAGEVASALAVETLQQYFQQHWQDEL 452 (645)
T ss_pred eeEEEEEECCCCCCCcccCCcccccccccccccccccccccceEEEEEeCCCCchhHHHHHHHHHHHHHHHHHhhhcccc
Confidence 4688999999998 99999998 1 246899999999999888877776666543 111111
Q ss_pred cHHHHHHHHHHHHhHHHHhhcc----CCCCCCCCeEEEEEEECCEEEEEEeccccEEEE-eCCccccCCCCCCCCChhHH
Q 024279 73 DTKLAISETYQQTDVDFLESER----DTYRDDGSTASTAILVGNHLYVANVGDSRTVIS-KAGKAIPLSEDHKPNRCDER 147 (270)
Q Consensus 73 ~~~~~l~~~~~~~~~~i~~~~~----~~~~~~gtT~~~~~i~~~~~~~a~vGDsr~~l~-r~~~~~~lt~dh~~~~~~e~ 147 (270)
.....+.++|..+|..|..... ....++|||++++++.+++++++||||||+|++ |+|++++||.||++.+.
T Consensus 453 ~~~~~L~~ai~~AN~~I~~~~~~~~~~~~~~MGTTlv~alI~~~~l~ianVGDSRaYli~r~g~l~QLT~DHs~~~~--- 529 (645)
T PRK14559 453 PDEETIREAIYLANEAIYDLNQQNARSGSGRMGTTLVMALVQDTQVAVAHVGDSRLYRVTRKGGLEQLTVDHEVGQR--- 529 (645)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCceeeeEEEECCEEEEEEecCceEEEEecCCeEEEeCCCCCHHHH---
Confidence 2356789999999999976521 244569999999999999999999999999998 47899999999998653
Q ss_pred HHHHHcCCeeeeCCceeecCeeecccccccccCCCceeeeceEEEEEecCCCeEEEEEcCCCcCC--CCh---HHHHHHH
Q 024279 148 KRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDV--VPN---EDAVALA 222 (270)
Q Consensus 148 ~~~~~~~g~~~~~~~~~~~~~~~~tr~lG~~~~~~~~~~~p~~~~~~l~~~~d~lvl~SDGv~~~--l~~---~~i~~~~ 222 (270)
+.+.| +........++.+.+||+||....+ ..+|++..+.+.++ |+||||||||||+ +.. +.+..++
T Consensus 530 --lv~~G--i~~~~a~~~p~~~~LTrALG~~~~~---~l~Pdi~~~~L~~g-D~lLLCSDGL~D~~~ve~~~~~~l~~il 601 (645)
T PRK14559 530 --EIQRG--VEPQIAYARPDAYQLTQALGPRDNS---AIQPDIQFLEIEED-TLLLLCSDGLSDNDLLETHWQTHLLPLL 601 (645)
T ss_pred --HHHhC--CCHHHHhcCcccceeeeccCCCCCC---cccceEEEEEcCCC-CEEEEECCCCCCCcccchHHHHHHHHHH
Confidence 22332 1111111224567899999986432 35789999999987 9999999999994 444 3456677
Q ss_pred HcCCCHHHHHHHHHHHHHHcCCCCccEEEEEEccCCCCCC
Q 024279 223 RTGEEPEIAARKLTETAFTRGSADNITCIVVRFHHVNEDP 262 (270)
Q Consensus 223 ~~~~~~~~~a~~l~~~a~~~~~~Dn~Tvivi~~~~~~~~~ 262 (270)
....+++++++.|++.|+.+++.||+|+|++++...+..+
T Consensus 602 ~~~~~l~~aa~~Li~~Al~~gg~DNITvIvV~l~~~p~~~ 641 (645)
T PRK14559 602 SSSANLDQGLNKLIDLANQYNGHDNITAILVRLKVRPQLS 641 (645)
T ss_pred hcCCCHHHHHHHHHHHHHHcCCCCcEEEEEEEeccCCCCC
Confidence 7777899999999999999999999999999998766543
No 9
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=6.6e-39 Score=269.15 Aligned_cols=234 Identities=44% Similarity=0.662 Sum_probs=203.1
Q ss_pred eEEEEEEecccCCCCCCccC-------CCccEEEEEcCCCchHHHHHHHHHHHHHHHcCCCCc----ccHHHHHHHHHHH
Q 024279 16 QLVIYMHVTDGKRHAISNSS-------YHVNLDRYKYGHGGSRAAEYLKEHLFENLLKHPQFM----TDTKLAISETYQQ 84 (270)
Q Consensus 16 ~~~~~~~s~~G~r~~neD~~-------~~~~~~~V~DG~GG~~~a~~a~~~~~~~l~~~~~~~----~~~~~~l~~~~~~ 84 (270)
.+.++..+..|.|..|||++ .+..+++|||||||..+++++++.+.+.+....... ..+...|.+++..
T Consensus 5 ~~~~~~~~~~~~r~~neD~~~~~~~~~~~~~~~~v~DG~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 84 (255)
T smart00332 5 GLRYGLSSMQGVRKPMEDAHVITPDLSDSGAFFGVFDGHGGSEAAKFLSKNLPEILAEELIKHKDELEDVEEALRKAFLK 84 (255)
T ss_pred ceeEEEecCCCCCCCCcceEEEeccCCCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHhHhhcccchhHHHHHHHHHHHH
Confidence 45666677777799999999 356799999999999999999999998887653322 2477889999999
Q ss_pred HhHHHHhhccC--CCCCCCCeEEEEEEECCEEEEEEeccccEEEEeCCccccCCCCCCCCChhHHHHHHHcCCeeeeCCc
Q 024279 85 TDVDFLESERD--TYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGT 162 (270)
Q Consensus 85 ~~~~i~~~~~~--~~~~~gtT~~~~~i~~~~~~~a~vGDsr~~l~r~~~~~~lt~dh~~~~~~e~~~~~~~~g~~~~~~~ 162 (270)
++..+...... ....+|||++++++..++++++|+||||+|++|++++.++|.||++.+..+..++...++.+..
T Consensus 85 ~~~~~~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~y~~~~~~~~~lt~dh~~~~~~~~~~i~~~~~~~~~--- 161 (255)
T smart00332 85 TDEEILEELESLEEDAGSGSTAVVALISGNKLYVANVGDSRAVLCRNGKAVQLTEDHKPSNEDERARIEAAGGFVIN--- 161 (255)
T ss_pred HHHHHHHhhhhccCCCCCCccEEEEEEECCEEEEEeccCceEEEEeCCceeEcCCCCCCcCHHHHHHHHHcCCEEEC---
Confidence 99999876333 2356899999999999999999999999999999999999999999999999999988886542
Q ss_pred eeecCeeecccccccccCCCceeeeceEEEEEe-cCCCeEEEEEcCCCcCCCChHHHHHHHHcCC---CHHHHHHHHHHH
Q 024279 163 WRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEV-DEGFELLVLASDGLWDVVPNEDAVALARTGE---EPEIAARKLTET 238 (270)
Q Consensus 163 ~~~~~~~~~tr~lG~~~~~~~~~~~p~~~~~~l-~~~~d~lvl~SDGv~~~l~~~~i~~~~~~~~---~~~~~a~~l~~~ 238 (270)
.+.++...+||++|....++.+.++|++...++ .++ |+|||||||||++++++++.+++.+.. ++.++++.|++.
T Consensus 162 ~~~~~~~~lt~~~g~~~~~~~i~~~p~~~~~~~~~~~-d~ill~SDGv~~~l~~~~i~~~~~~~~~~~~~~~~~~~l~~~ 240 (255)
T smart00332 162 GRVNGVLALSRAIGDFFLKPYVSAEPDVTVVELTEKD-DFLILASDGLWDVLSNQEVVDIVRKHLSKSDPEEAAKRLIDL 240 (255)
T ss_pred CeECCeEecccccCCHhhcCCeEeeeEEEEEEecCCC-cEEEEECCccccCCCHHHHHHHHHHHhhcCCHHHHHHHHHHH
Confidence 256667899999999888888889999999996 776 999999999999999999999998755 699999999999
Q ss_pred HHHcCCCCccEEEEE
Q 024279 239 AFTRGSADNITCIVV 253 (270)
Q Consensus 239 a~~~~~~Dn~Tvivi 253 (270)
|..++..||+|+|++
T Consensus 241 a~~~~~~Dn~T~ivv 255 (255)
T smart00332 241 ALARGSKDNITVIVV 255 (255)
T ss_pred HHHcCCCCCeEEEEC
Confidence 999999999999985
No 10
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-35 Score=244.66 Aligned_cols=165 Identities=36% Similarity=0.596 Sum_probs=148.6
Q ss_pred CCCeEEEEEEECCEEEEEEeccccEEEEeCCccccCCCCCCCCChhHHHHHHHcCCeeeeCCceeecCeeeccccccccc
Q 024279 100 DGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRM 179 (270)
Q Consensus 100 ~gtT~~~~~i~~~~~~~a~vGDsr~~l~r~~~~~~lt~dh~~~~~~e~~~~~~~~g~~~~~~~~~~~~~~~~tr~lG~~~ 179 (270)
+|||+++|++.+.++++||.||||+.+.|+|+.+-++.||.|....|..||...||.++. ..|++|.++++|+||+..
T Consensus 330 SGtTAvVcLv~g~~liVANAGDSRcV~sr~GkAvdmS~DHKPEDevE~~RI~~AGG~vtl--DGRVNGGLNLSRA~GDHa 407 (542)
T KOG0699|consen 330 SGTTAVVCLVGGDKLIVANAGDSRCVLSRNGKAVDMSVDHKPEDEVETNRIHAAGGQVTL--DGRVNGGLNLSRAFGDHA 407 (542)
T ss_pred CCceEEEEEecCceEEEecCCCcceEEecCCceeecccCCCcccHHHHHHHHhcCCeEee--cceecCccchhhhhhhhh
Confidence 799999999999999999999999999999999999999999999999999999999987 458899999999999999
Q ss_pred CC---------CceeeeceEEEEEecCCCeEEEEEcCCCcCCCChHHHHHHHHc----CCCHHHHHHHHHHHHHHc----
Q 024279 180 LK---------QFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALART----GEEPEIAARKLTETAFTR---- 242 (270)
Q Consensus 180 ~~---------~~~~~~p~~~~~~l~~~~d~lvl~SDGv~~~l~~~~i~~~~~~----~~~~~~~a~~l~~~a~~~---- 242 (270)
+| +.+++-|+|..+.|.+.+.|+|+++||||++++.+++.++++. ......+|++|++.+++.
T Consensus 408 YK~N~~Lp~eEQMIsALPDiK~l~lTpedEFmVvACDGIWN~MsSqeVVdFvr~~l~~n~~ls~iceeL~D~CLAp~T~G 487 (542)
T KOG0699|consen 408 YKKNQELPLEEQMISALPDIKILALTPEDEFMVVACDGIWNSMSSQEVVDFVRDLLAKNSSLSEICEELCDACLAPSTDG 487 (542)
T ss_pred hhcccCCChHHHHhhhcccceeEeecCcccEEEEEccchhhhccHHHHHHHHHHHHhcCchHHHHHHHHHHhhcCCCCCC
Confidence 88 4688999999999999999999999999999999999888865 566788999999999874
Q ss_pred --CCCCccEEEEEEccCCCCCCCCCCC
Q 024279 243 --GSADNITCIVVRFHHVNEDPAEPEV 267 (270)
Q Consensus 243 --~~~Dn~Tvivi~~~~~~~~~~~~~~ 267 (270)
.+.||+|||++.|.+ +....+|.+
T Consensus 488 DGTGCDNMT~ii~~Fkr-k~~elqpnq 513 (542)
T KOG0699|consen 488 DGTGCDNMTVIITTFKR-KSKELQPNQ 513 (542)
T ss_pred CCcCCCcceEEEEEecc-chhhcCCcc
Confidence 257999999999994 444455543
No 11
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-33 Score=235.52 Aligned_cols=216 Identities=35% Similarity=0.537 Sum_probs=180.6
Q ss_pred CCCCCccC-------CCccEEEEEcCCCchHHHHHHHHHHHHHHH------------cCCCC------------------
Q 024279 28 RHAISNSS-------YHVNLDRYKYGHGGSRAAEYLKEHLFENLL------------KHPQF------------------ 70 (270)
Q Consensus 28 r~~neD~~-------~~~~~~~V~DG~GG~~~a~~a~~~~~~~l~------------~~~~~------------------ 70 (270)
.+.-||+. .++.++||+|||||+.++++.++.+...+. .....
T Consensus 82 ~~~~edrv~~~~s~~~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~ 161 (390)
T KOG0700|consen 82 GKAEEDRVSVAVSEENGWLFVGIYDGHGGPDASRFLSDHLYPYVARELQGLLWQDEERFPSEYKSEELEHLLVYWKQLSS 161 (390)
T ss_pred CCcccCcceeeeeccCCeEEEEEecCCCCccHHHHHHHHHHHHHHHHhhhhhhhhccccccccccchhhhhhhhhhcccc
Confidence 34455655 889999999999999999999999988776 11111
Q ss_pred ----cccHHHHHHHHHHHHhHHHHhh------ccCCCCCCCCeEEEEEEECCEEEEEEeccccEEEEe---CC---cccc
Q 024279 71 ----MTDTKLAISETYQQTDVDFLES------ERDTYRDDGSTASTAILVGNHLYVANVGDSRTVISK---AG---KAIP 134 (270)
Q Consensus 71 ----~~~~~~~l~~~~~~~~~~i~~~------~~~~~~~~gtT~~~~~i~~~~~~~a~vGDsr~~l~r---~~---~~~~ 134 (270)
...+.++|.+||.++.+++... ..+...-+|++|++.++.++.+|+||+||||+.|-+ ++ ...|
T Consensus 162 ~~~~~~~v~~al~~Af~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~~i~~~~LyVaN~GDSRAVLG~~~~~~~~~~A~q 241 (390)
T KOG0700|consen 162 ADQRHGDVLEALSKAFEATEEDFLEMVDKQLQENPELALVGSCCLVGLIKGGDLYVANVGDSRAVLGVVENNGSWLVAVQ 241 (390)
T ss_pred cCccchhHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhcceEEEEEEeCCeEEEEecCcchhhhceecCCCCeEEEEe
Confidence 3567889999999999988755 334455689999999999999999999999999855 33 4689
Q ss_pred CCCCCCCCChhHHHHHHHcC---CeeeeCCceeecCeeecccccccccCC---------------------CceeeeceE
Q 024279 135 LSEDHKPNRCDERKRIENAG---GVVMWAGTWRVGGVLAMSRAFGNRMLK---------------------QFVVAEPEI 190 (270)
Q Consensus 135 lt~dh~~~~~~e~~~~~~~~---g~~~~~~~~~~~~~~~~tr~lG~~~~~---------------------~~~~~~p~~ 190 (270)
||.||+..++.|++||...+ ..+.....+|+.|.+++||++|+..+| |+++++|++
T Consensus 242 LS~dHn~~ne~Ev~Rir~eHPdd~~~vv~~~~RvkG~L~vsRAfGd~~lK~~~~n~e~l~~~fr~~~~~t~PyltaeP~i 321 (390)
T KOG0700|consen 242 LSTDHNASNEDEVRRIRSEHPDDPHIVVNKHWRVKGILQVSRAFGDGYLKWPEFNQEPLLEKFRIPYIGTPPYLTAEPSI 321 (390)
T ss_pred cChhhccccHHHHHHHHHhCCCCcceEeeccceeeEEEEeeeeccceeecchhhccchhHhhcCCCCCCCCCceeccceE
Confidence 99999999999999998764 344444558999999999999999888 679999999
Q ss_pred EEEEecCCCeEEEEEcCCCcCCCChHHHHHHHHcC----CCHHHHHHHHHHHHHHcC
Q 024279 191 QDLEVDEGFELLVLASDGLWDVVPNEDAVALARTG----EEPEIAARKLTETAFTRG 243 (270)
Q Consensus 191 ~~~~l~~~~d~lvl~SDGv~~~l~~~~i~~~~~~~----~~~~~~a~~l~~~a~~~~ 243 (270)
....|.+.|.||||+|||+|++++++++.+++..+ ..-+.+|+.|++.|+.+.
T Consensus 322 ~~HrL~p~DkFLIlASDGLwE~lsNeeaV~lV~~~i~~~~pd~~~A~hLIr~aL~~a 378 (390)
T KOG0700|consen 322 THHKLTPNDKFLILASDGLWEYLSNEEAVSLVHEFISGKFPDGNPATHLIRHALGRA 378 (390)
T ss_pred EEEEcCCCCeEEEEeccchhhhcChHHHHHHHHHhhccCCCCCCHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999774 334678889999887654
No 12
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.93 E-value=3.7e-24 Score=176.15 Aligned_cols=200 Identities=19% Similarity=0.256 Sum_probs=139.3
Q ss_pred CCCCCccC-----CCccEEEEEcCCCchHHHHH----HHHHHH----HHHHcCCCCcccHHHHHHHHHHHHhHHHHhhcc
Q 024279 28 RHAISNSS-----YHVNLDRYKYGHGGSRAAEY----LKEHLF----ENLLKHPQFMTDTKLAISETYQQTDVDFLESER 94 (270)
Q Consensus 28 r~~neD~~-----~~~~~~~V~DG~GG~~~a~~----a~~~~~----~~l~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~ 94 (270)
.+.-||++ ....+.|||||+|||..-.+ .++.+. +.+.+......++...|..++.+. ...
T Consensus 88 ~~~GEDa~Fvss~~~~~v~GVADGVGGWa~~GiDpg~fS~eLM~~ce~~v~~~~~~~~~P~~lL~~ay~~l----~~~-- 161 (330)
T KOG1379|consen 88 GKGGEDAWFVSSNPHAIVMGVADGVGGWAEYGIDPGAFSRELMSNCERLVQNSDFNPSDPVNLLEKAYAEL----KSQ-- 161 (330)
T ss_pred CCCCCcceeeccCcccceEEEccccchHhhcCcCHHHHHHHHHHHHHHHhcccccCCCChHHHHHHHHHHH----hhc--
Confidence 34578999 68899999999998776332 222222 222333444457777777766654 222
Q ss_pred CCCCCCCCeEEEEEEE--CCEEEEEEeccccEEEEeCCccccCCCCCCCCChhHHHHHHHcCCeeeeCCceeecCeeecc
Q 024279 95 DTYRDDGSTASTAILV--GNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMS 172 (270)
Q Consensus 95 ~~~~~~gtT~~~~~i~--~~~~~~a~vGDsr~~l~r~~~~~~lt~dh~~~~~~e~~~~~~~~g~~~~~~~~~~~~~~~~t 172 (270)
....-+++|+++++++ +++++++|+|||.+.++|+|++.+.|..+........|-- .++. ...
T Consensus 162 ~~~~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~VvR~G~vv~~S~~Q~H~FN~PyQLs--------------~~p~-~~~ 226 (330)
T KOG1379|consen 162 KVPIVGSSTACILALDRENGKLHTANLGDSGFLVVREGKVVFRSPEQQHYFNTPYQLS--------------SPPE-GYS 226 (330)
T ss_pred CCCCCCcceeeeeeeecCCCeEEEeeccCcceEEEECCEEEEcCchheeccCCceeec--------------cCCc-ccc
Confidence 1222367888888888 8899999999999999999999988887765431111100 0000 002
Q ss_pred cccccccCCCceeeeceEEEEEecCCCeEEEEEcCCCcCCCChHHHHHHHHc-----CCCHHHHHHHHHHHHHHc-----
Q 024279 173 RAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALART-----GEEPEIAARKLTETAFTR----- 242 (270)
Q Consensus 173 r~lG~~~~~~~~~~~p~~~~~~l~~~~d~lvl~SDGv~~~l~~~~i~~~~~~-----~~~~~~~a~~l~~~a~~~----- 242 (270)
.++++. .-..+..++++.+| |+|||+||||||++.+++|.+++.. ..+++..|+.|+..|...
T Consensus 227 ~~~~d~------p~~ad~~~~~v~~G-DvIilATDGlfDNl~e~~Il~il~~~~~~~~~~lq~~A~~ia~~Ar~ls~d~~ 299 (330)
T KOG1379|consen 227 SYISDV------PDSADVTSFDVQKG-DVIILATDGLFDNLPEKEILSILKGLDARGNLDLQVTAQKIAEKARELSRDPK 299 (330)
T ss_pred ccccCC------ccccceEEEeccCC-CEEEEecccccccccHHHHHHHHHHhhccccccHHHHHHHHHHHHHHhccCcC
Confidence 223332 23446788999999 9999999999999999999999965 467899999999988552
Q ss_pred ------------------CCCCccEEEEEEc
Q 024279 243 ------------------GSADNITCIVVRF 255 (270)
Q Consensus 243 ------------------~~~Dn~Tvivi~~ 255 (270)
|..||||+|+..+
T Consensus 300 ~~SPFA~~Ar~~g~~~~gGK~DdITvvls~v 330 (330)
T KOG1379|consen 300 FQSPFAQAAREHGFKAYGGKPDDITVVLSSV 330 (330)
T ss_pred cCChHHHHHHHhCcccCCCCcccEEEEEecC
Confidence 4589999998754
No 13
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]
Probab=99.93 E-value=2.1e-24 Score=177.93 Aligned_cols=220 Identities=27% Similarity=0.410 Sum_probs=168.1
Q ss_pred CCccEEEEEcCCCchHHHHHHHHHHHHHHHcCC--------------------------C--------------CcccHH
Q 024279 36 YHVNLDRYKYGHGGSRAAEYLKEHLFENLLKHP--------------------------Q--------------FMTDTK 75 (270)
Q Consensus 36 ~~~~~~~V~DG~GG~~~a~~a~~~~~~~l~~~~--------------------------~--------------~~~~~~ 75 (270)
.++.+|.+||||.|..+|-.|++.+.+.+.... . ...-+.
T Consensus 142 ~~~~~~slfdghags~~avvAsrll~~hI~~ql~~vvd~i~~~~~~~~~~~g~~~~~s~~s~~~~~~~~ek~Ir~E~LVi 221 (493)
T KOG1323|consen 142 ADGALFSLFDGHAGSAVAVVASRLLHRHIKEQLCEVVDTILHMDRHENLNFGKHRSESSYSMSEMSREDEKRIRHEHLVI 221 (493)
T ss_pred CcceeeeeecCCCcchHHHHHHHHHHHhhhHHHHHHHHHHhhhccccccccccccccCCcccccccchhhccCchHHhhH
Confidence 678999999999999999999887655443200 0 001245
Q ss_pred HHHHHHHHHHhHHHHhhccCCCCCCCCeEEEEEEECCEEEEEEeccccEEEEeCCccccCCCCCCCCChhHHHHHHHcC-
Q 024279 76 LAISETYQQTDVDFLESERDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAG- 154 (270)
Q Consensus 76 ~~l~~~~~~~~~~i~~~~~~~~~~~gtT~~~~~i~~~~~~~a~vGDsr~~l~r~~~~~~lt~dh~~~~~~e~~~~~~~~- 154 (270)
.+|..+|+.....|......-...+|||+.+++.--+++|++|.||||++++|+++++.++++-++.. |++|++...
T Consensus 222 GAlEsAFqemDeqiarer~~~~~~GGCtalvvi~llGKlYvaNAGDsRAIlVrndeirplS~efTPet--ERqRlQ~Laf 299 (493)
T KOG1323|consen 222 GALESAFQEMDEQIARERQVWRLPGGCTALVVIVLLGKLYVANAGDSRAILVRNDEIRPLSKEFTPET--ERQRLQELAF 299 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCceEEEeeeeccceEEccCCCceEEEEecCCeeecccccCcHH--HHHHHHHHhh
Confidence 67888999999888877666666789999999999999999999999999999999999999999866 888886642
Q ss_pred -------CeeeeC--------------------------------------------CceeecCeeecccccccccCC--
Q 024279 155 -------GVVMWA--------------------------------------------GTWRVGGVLAMSRAFGNRMLK-- 181 (270)
Q Consensus 155 -------g~~~~~--------------------------------------------~~~~~~~~~~~tr~lG~~~~~-- 181 (270)
+.++.- ...|+.+.+.+||-||+..++
T Consensus 300 ~~PeLlgneFtrLEfprRl~~~dLgqrvLyRD~~MtGWayKtve~~DLr~pLI~gegrkaRll~TigVsRGlGDH~Lkv~ 379 (493)
T KOG1323|consen 300 RNPELLGNEFTRLEFPRRLTIKDLGQRVLYRDWNMTGWAYKTVEEEDLRFPLISGEGRKARLLATIGVSRGLGDHHLKVV 379 (493)
T ss_pred cChHhhcccccceecccccChhhhcceeeeeccccccceeehhhhhcCCcceecccchhhhhhhhheeccccCcceeeee
Confidence 222111 112233457899999998776
Q ss_pred -------CceeeeceEEEEEecC----CCeEEEEEcCCCcCCCChHHHHHHHHcC------CCHH---HHHHHHHHHHHH
Q 024279 182 -------QFVVAEPEIQDLEVDE----GFELLVLASDGLWDVVPNEDAVALARTG------EEPE---IAARKLTETAFT 241 (270)
Q Consensus 182 -------~~~~~~p~~~~~~l~~----~~d~lvl~SDGv~~~l~~~~i~~~~~~~------~~~~---~~a~~l~~~a~~ 241 (270)
|.+++.|++..+++.+ .||++||+|||+||.++++++..+++.. .+|. .+++.|+..|..
T Consensus 380 dsnl~iKPFLssvPeV~V~dl~q~e~~~DdVvilatDGLWDVlSneeva~~Vrs~L~~~dp~Dp~RYt~aaqdlva~arg 459 (493)
T KOG1323|consen 380 DSNLSIKPFLSSVPEVRVYDLRQYEHLTDDVVILATDGLWDVLSNEEVALIVRSFLPSTDPADPSRYTQAAQDLVAAARG 459 (493)
T ss_pred cCCcccchhhhcCCeeEEEehhhhccCCCcEEEEecCchhhhcccHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcC
Confidence 6688889988887753 2489999999999999999999988762 2332 456667666533
Q ss_pred -------------cCCCCccEEEEEEccC
Q 024279 242 -------------RGSADNITCIVVRFHH 257 (270)
Q Consensus 242 -------------~~~~Dn~Tvivi~~~~ 257 (270)
.++.|||||.||-+..
T Consensus 460 ~~k~rgWr~~n~~lgSgDDIsVfVIPL~~ 488 (493)
T KOG1323|consen 460 QQKDRGWRMNNGGLGSGDDISVFVIPLKY 488 (493)
T ss_pred ccCCCceeccCCCcCCCCceEEEEEeccC
Confidence 2468999999998875
No 14
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.87 E-value=8.6e-22 Score=160.95 Aligned_cols=174 Identities=20% Similarity=0.293 Sum_probs=98.0
Q ss_pred EEecccCCCCCCccC-----CCccEEEEEcCCCchHH----HHHHHHHHHHHHHcCCCCccc--HHHHHHHHHHHHhHHH
Q 024279 21 MHVTDGKRHAISNSS-----YHVNLDRYKYGHGGSRA----AEYLKEHLFENLLKHPQFMTD--TKLAISETYQQTDVDF 89 (270)
Q Consensus 21 ~~s~~G~r~~neD~~-----~~~~~~~V~DG~GG~~~----a~~a~~~~~~~l~~~~~~~~~--~~~~l~~~~~~~~~~i 89 (270)
+.++.|.+..|||++ .+..+++|+||+||... |..+++.+.+.+......... ....+..+...+...+
T Consensus 2 G~sh~~~~~~nqD~~~~~~~~~~~~~aVaDG~g~~~~~~~aa~~av~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (212)
T PF13672_consen 2 GRSHRGRGAPNQDAFGIRTDDDGNLAAVADGVGGSPYGEEAAQLAVETFINYLKKLLSQESPSSIEALIRAIKKEILSIV 81 (212)
T ss_dssp -----TTSSS--EEEEEE-TCCTCEEEEEEEESTTTHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccccCCCCCCCCCEEeeeCCCCEEEEEEECCCCCchhHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHh
Confidence 468899999999999 67788899999996555 445555555555554433221 1222232222322211
Q ss_pred -----HhhccCCCCCCCCeEEEEEEECCEEEEEEeccccEEE-EeCCccccCCCCCCCCChhHHHHHHHcCCeeeeCCce
Q 024279 90 -----LESERDTYRDDGSTASTAILVGNHLYVANVGDSRTVI-SKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTW 163 (270)
Q Consensus 90 -----~~~~~~~~~~~gtT~~~~~i~~~~~~~a~vGDsr~~l-~r~~~~~~lt~dh~~~~~~e~~~~~~~~g~~~~~~~~ 163 (270)
...........+||++++++.+++++++|+||||+|+ .++|.+..++.+|+... .
T Consensus 82 ~~~~~~~~~~~~~~~~~tTl~~~v~~~~~~~~~~iGD~~i~~~~~~g~~~~l~~~~~~~~----~--------------- 142 (212)
T PF13672_consen 82 RAFQSAKQADLELRDYGTTLLALVIDPDKVYIFNIGDSRIYVIRRNGEIQQLTDDHSGEY----P--------------- 142 (212)
T ss_dssp ----HHHHHSGGGTT-EE-EEEEEEETTEEEEEEESS-EEEEEEETTEEEE-S---BHHH----H---------------
T ss_pred hhhhhhhhccccccccCceEEEEEEECCEEEEEEECCCeEEEEECCCEEEEcCCCccchh----h---------------
Confidence 1112445566899999999999999999999999975 57999999999997211 0
Q ss_pred eecCeeecccccccccCCCceeeeceEEEEEecCCCeEEEEEcCCCcCCCChHH-HHHHHHc
Q 024279 164 RVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNED-AVALART 224 (270)
Q Consensus 164 ~~~~~~~~tr~lG~~~~~~~~~~~p~~~~~~l~~~~d~lvl~SDGv~~~l~~~~-i~~~~~~ 224 (270)
..|+.+.... .....++..+++.++ +.|+|||||||+.+...+ +..++..
T Consensus 143 ------~~~~~~~~~~----~~~~~~~~~~~~~~~-d~ilL~SDG~~~~l~~~~~~~~~l~~ 193 (212)
T PF13672_consen 143 ------NQTRSLTGDD----PEPDVQYGSIPLEEG-DVILLCSDGVWDNLRSYEDLEQFLKD 193 (212)
T ss_dssp ------HCTTSCCHHC----CCTETEEEEEE--TT--EEEEE-HHHHTTS-HHHHHHHH---
T ss_pred ------hhhhccCccc----cccCCeEEEEEcCCC-CEEEEECcCccccCCCHHHHHHHhhh
Confidence 1133333221 123346667788888 999999999999998554 6666654
No 15
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.86 E-value=8.5e-21 Score=175.20 Aligned_cols=240 Identities=25% Similarity=0.374 Sum_probs=204.9
Q ss_pred ceEEEEEEecccCCCCCCccC--------CCccEEEEEcCCCchHHHHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHh
Q 024279 15 FQLVIYMHVTDGKRHAISNSS--------YHVNLDRYKYGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTD 86 (270)
Q Consensus 15 ~~~~~~~~s~~G~r~~neD~~--------~~~~~~~V~DG~GG~~~a~~a~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~ 86 (270)
.-+.+|++...|.|.++.-+. .....|+.+||-+......+....+.+.+.+......+-.+.|+..|...+
T Consensus 520 ~~~t~Gv~~~~gqrnk~c~~~~~v~nf~~~~~a~~g~~dgs~n~~v~~~vq~~ma~~L~eev~~~~~et~~mr~~fl~~~ 599 (1081)
T KOG0618|consen 520 FLWTYGVAGVSGQRNKVCSRAVWVENFFLNPQATFGCFDGSRNSRVLSLVQDTMASYLAEEVQLYGNETEQMRNTFLRLN 599 (1081)
T ss_pred eheeeccchhcccccchhhhhhhhhhcccCCcceEEEEcCCCchhHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHh
Confidence 356788888888877665555 677889999999999988888888888877655555555666999999999
Q ss_pred HHHHhhccCCCCCCCCeEEEEEEE--------CCEEEEEEeccccEEEEeCCccccCCCCCCC-CChhHHHHHHHcCCee
Q 024279 87 VDFLESERDTYRDDGSTASTAILV--------GNHLYVANVGDSRTVISKAGKAIPLSEDHKP-NRCDERKRIENAGGVV 157 (270)
Q Consensus 87 ~~i~~~~~~~~~~~gtT~~~~~i~--------~~~~~~a~vGDsr~~l~r~~~~~~lt~dh~~-~~~~e~~~~~~~~g~~ 157 (270)
+++..... ..|..++.+.|. ..+++.|++|+|++.+.++|+-.++|+-... ..++|.+|+...+|.+
T Consensus 600 rklg~~g~----~lg~~~~~~~i~~d~~~~asS~~l~~Anvg~c~avls~ng~~~p~t~~~~~~v~~eE~~RI~~~~g~i 675 (1081)
T KOG0618|consen 600 RKLGEEGQ----VLGGSVVLCQIVEDSLSPASSKTLFAANVGTCMAVLSRNGKPLPTTRSPMLEVDREEYKRIVDSKGFI 675 (1081)
T ss_pred hhhhhhhc----cccchhhheeecccccCcccchhhhHhhhccchhhhhhcCCcCcccccccccCCHHHHHHHHHhcCee
Confidence 99944432 245666666665 3378999999999999999998887776644 4799999999999998
Q ss_pred eeCCceeecCeeecccccccccCCCceeeeceEEEEEecCCCeEEEEEcCCCcCCCChHHHHHHHHcCCCHHHHHHHHHH
Q 024279 158 MWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGEEPEIAARKLTE 237 (270)
Q Consensus 158 ~~~~~~~~~~~~~~tr~lG~~~~~~~~~~~p~~~~~~l~~~~d~lvl~SDGv~~~l~~~~i~~~~~~~~~~~~~a~~l~~ 237 (270)
.. ..+..|+...||++|.....|.+.+.|.+....|.+.|++||+++-++|++++-++..+.+++..+|-.+|.+|++
T Consensus 676 ~e--d~k~ngvt~~tR~iG~~~l~P~v~p~Phv~~~~Lt~qdE~LIvgn~~lW~~Lsid~a~~~vRn~~dpL~AAkKL~d 753 (1081)
T KOG0618|consen 676 TE--DNKLNGVTSSTRAIGPFSLFPHVLPDPHVSVVILTEQDEFLIVGNKQLWSVLSIDTAVDAVRNVEDPLLAAKKLCD 753 (1081)
T ss_pred cC--CCeeeceeeeeeecccccccccccCCCceeeEecccCceEEEEcchHHhhhccHHHHHHHHhcCCchHHHHHHHHH
Confidence 85 7788899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCccEEEEEEccCCCC
Q 024279 238 TAFTRGSADNITCIVVRFHHVNE 260 (270)
Q Consensus 238 ~a~~~~~~Dn~Tvivi~~~~~~~ 260 (270)
.|...|+.||++++|+++....+
T Consensus 754 ~AqSYgc~~nv~vlVv~l~~~~~ 776 (1081)
T KOG0618|consen 754 LAQSYGCAENVSVLVVRLNHLEE 776 (1081)
T ss_pred HHHhcccccCeeEEEEEeecchh
Confidence 99999999999999999986554
No 16
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=99.84 E-value=4.3e-19 Score=142.86 Aligned_cols=176 Identities=19% Similarity=0.137 Sum_probs=131.6
Q ss_pred EEEEecccCCCCCCccC------CCccEEEEEcCCCchHHHHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHhHHHHhh
Q 024279 19 IYMHVTDGKRHAISNSS------YHVNLDRYKYGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVDFLES 92 (270)
Q Consensus 19 ~~~~s~~G~r~~neD~~------~~~~~~~V~DG~GG~~~a~~a~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~i~~~ 92 (270)
++....++ ...+.|.+ ++..+++|+||+|+...|.+++..+...+......... +.+.+..+++.+...
T Consensus 6 ~~~~~~p~-~~~~GD~~~~~~~~~~~~~~~v~Dg~G~G~~aa~~s~~~~~~~~~~~~~~~~----~~~~l~~~n~~l~~~ 80 (193)
T smart00331 6 IAQYYEDA-TQVGGDFYDVVKLPEGRLLIAIADVMGKGLAAALAMSMARSALRTLLSEGIS----LSQILERLNRAIYEN 80 (193)
T ss_pred EEEEEcch-HhcCccEEEEEEeCCCeEEEEEEecCCCChHHHHHHHHHHHHHHHHhhcCCC----HHHHHHHHHHHHHhc
Confidence 33333333 57788888 55799999999999989888888888877654332222 445666777777554
Q ss_pred ccCCCCCCCCeEEEEEEE--CCEEEEEEeccccEEEEe-CCccccCCCCCCCCChhHHHHHHHcCCeeeeCCceeecCee
Q 024279 93 ERDTYRDDGSTASTAILV--GNHLYVANVGDSRTVISK-AGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVL 169 (270)
Q Consensus 93 ~~~~~~~~gtT~~~~~i~--~~~~~~a~vGDsr~~l~r-~~~~~~lt~dh~~~~~~e~~~~~~~~g~~~~~~~~~~~~~~ 169 (270)
....+++|+++++++ .++++++|+||+++|+++ ++...+++.+.
T Consensus 81 ---~~~~~~~T~~~~~id~~~~~l~~~~~Gd~~~~~~~~~~~~~~~~~~~------------------------------ 127 (193)
T smart00331 81 ---GEDGMFATLFLALYDFAGGTLSYANAGHSPPYLLRADGGLVEDLDDL------------------------------ 127 (193)
T ss_pred ---CCCCcEEEEEEEEEECCCCEEEEEeCCCCceEEEECCCCeEEEcCCC------------------------------
Confidence 233479999999984 889999999999999999 55554444432
Q ss_pred ecccccccccCCCceeeeceEEEEEecCCCeEEEEEcCCCcCCCChHHHHHHHHcC--CCHHHHHHHHHHHHH
Q 024279 170 AMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTG--EEPEIAARKLTETAF 240 (270)
Q Consensus 170 ~~tr~lG~~~~~~~~~~~p~~~~~~l~~~~d~lvl~SDGv~~~l~~~~i~~~~~~~--~~~~~~a~~l~~~a~ 240 (270)
+..+|... ..+++...+++.++ |+|+|+|||+++.+.++++.+++.+. .++++.+++|++.+.
T Consensus 128 --~~~lG~~~-----~~~~~~~~~~l~~g-d~l~l~TDGl~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~~~ 192 (193)
T smart00331 128 --GAPLGLEP-----DVEVDVRELTLEPG-DLLLLYTDGLTEARNPERLEELLEELLGSPPAEIAQRILEELL 192 (193)
T ss_pred --CceeeeCC-----CCcceeEEEeeCCC-CEEEEECCCccccCChHHHHHHHHHhcCCCHHHHHHHHHHHHh
Confidence 34467542 23466788899999 99999999999999999999999874 468888888887753
No 17
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=99.82 E-value=8.3e-19 Score=166.38 Aligned_cols=198 Identities=17% Similarity=0.124 Sum_probs=145.0
Q ss_pred eeceEEEEEEecccC-CCCCCccC------CCccEEEEEcCCCchHHHHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHH
Q 024279 13 VSFQLVIYMHVTDGK-RHAISNSS------YHVNLDRYKYGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQT 85 (270)
Q Consensus 13 ~~~~~~~~~~s~~G~-r~~neD~~------~~~~~~~V~DG~GG~~~a~~a~~~~~~~l~~~~~~~~~~~~~l~~~~~~~ 85 (270)
.++++.++++..... +..++|.+ ++..+++|+||+|+...|..++..+.+.+.+......+ ...++..+
T Consensus 548 ~~~~~~~g~a~~~k~g~~vsGD~y~~~~l~~g~~~~~laDGmGhG~~Aa~~S~~~~~ll~~~~~~g~~----~~~ai~~l 623 (764)
T TIGR02865 548 PKYHVSTGVARAAKDGELVSGDSYSFGKLSAGKYAVAISDGMGSGPEAAQESSACVRLLEKFLESGFD----REVAIKTV 623 (764)
T ss_pred CceeehhhHHHhcCCCCcccCceEEEEEECCCEEEEEEEcccCCCHHHHHHHHHHHHHHHHHHHcCCC----HHHHHHHH
Confidence 556677666665444 88999998 56678999999997777777666665555432111111 24567777
Q ss_pred hHHHHhhccCCCCCCCCeEEEEEEE--CCEEEEEEeccccEEEEeCCccccCCCCCCCCChhHHHHHHHcCCeeeeCCce
Q 024279 86 DVDFLESERDTYRDDGSTASTAILV--GNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTW 163 (270)
Q Consensus 86 ~~~i~~~~~~~~~~~gtT~~~~~i~--~~~~~~a~vGDsr~~l~r~~~~~~lt~dh~~~~~~e~~~~~~~~g~~~~~~~~ 163 (270)
|..+.... ...+.+|+.+++++ .+++.++++|+++.|+.|++.+.+++..+.|
T Consensus 624 N~~L~~~~---~~~~faTl~l~~IDl~~g~~~~~~aG~~p~~i~r~~~v~~i~s~~lP---------------------- 678 (764)
T TIGR02865 624 NSILSLRS---TDEKFSTLDLSVIDLYTGQAEFVKVGAVPSFIKRGAKVEVIRSSNLP---------------------- 678 (764)
T ss_pred HHHHHhCC---CCCeEEEEEEEEEECCCCeEEEEecCCCceEEEECCEEEEecCCCce----------------------
Confidence 77665442 22368999999997 7899999999999999999888777654332
Q ss_pred eecCeeecccccccccCCCceeeeceEEEEEecCCCeEEEEEcCCCcCCCChH-----HHHHHHHc--CCCHHHHHHHHH
Q 024279 164 RVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNE-----DAVALART--GEEPEIAARKLT 236 (270)
Q Consensus 164 ~~~~~~~~tr~lG~~~~~~~~~~~p~~~~~~l~~~~d~lvl~SDGv~~~l~~~-----~i~~~~~~--~~~~~~~a~~l~ 236 (270)
+|... ..+++..+.++.+| |+|||+|||+++..++. .+.+++++ ..+|+++++.|+
T Consensus 679 -----------lGil~-----~~~~~~~~~~L~~G-D~Lll~SDGv~E~~~~~~~~~~~l~~~l~~~~~~~p~ela~~Il 741 (764)
T TIGR02865 679 -----------IGILD-----EVDVELVRKKLKNG-DLIVMVSDGVLEGEKEVEGKVLWLVRKLKETNTNDPEEIAEYLL 741 (764)
T ss_pred -----------eEecc-----CCccceEEEEeCCC-CEEEEECCCCCcCCcccccHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 33211 24566778899999 99999999999987643 37777765 468999999999
Q ss_pred HHHHHcC---CCCccEEEEEEcc
Q 024279 237 ETAFTRG---SADNITCIVVRFH 256 (270)
Q Consensus 237 ~~a~~~~---~~Dn~Tvivi~~~ 256 (270)
+.+.... ..||+|+++++++
T Consensus 742 ~~a~~~~~~~~~DD~Tvlvirv~ 764 (764)
T TIGR02865 742 EKAKELRSGKIKDDMTVIVAKVY 764 (764)
T ss_pred HHHHHhcCCCCCCCeEEEEEEeC
Confidence 9987643 4799999999873
No 18
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=99.70 E-value=1.6e-15 Score=121.99 Aligned_cols=175 Identities=19% Similarity=0.212 Sum_probs=116.5
Q ss_pred CccEEEEEcCCCchHHHHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHhHHHHhhccCCCCCCCCeEEEEEEE--CCEE
Q 024279 37 HVNLDRYKYGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVDFLESERDTYRDDGSTASTAILV--GNHL 114 (270)
Q Consensus 37 ~~~~~~V~DG~GG~~~a~~a~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~gtT~~~~~i~--~~~~ 114 (270)
+..+++|+|+.|....|.+.+..+...+........+ ....+..+|+.+....... ...+|++++.++ .+++
T Consensus 3 ~~~~~~v~D~~GhG~~aa~~~~~~~~~~~~~~~~~~~----p~~~l~~ln~~l~~~~~~~--~~~~t~~~~~~d~~~~~l 76 (193)
T PF07228_consen 3 GRYFIIVGDVSGHGVSAALLSAALASAIRELLDEGLD----PEELLEALNRRLYRDLKGD--NRYATACYAIIDPETGTL 76 (193)
T ss_dssp TEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHTTTS----HHHHHHHHHHHHHHHTTTT--STTEEEEEEEEETTTTEE
T ss_pred CEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHcCCC----HHHHHHHHHHHHHHHhhhc--cccceEEEEEecccceEE
Confidence 5678999999996666665555554444322111111 3446666666664443322 368899989887 7789
Q ss_pred EEEEeccccEEEEeCC--ccccCCCCCCCCChhHHHHHHHcCCeeeeCCceeecCeeecccccccccCCCceeeeceEEE
Q 024279 115 YVANVGDSRTVISKAG--KAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQD 192 (270)
Q Consensus 115 ~~a~vGDsr~~l~r~~--~~~~lt~dh~~~~~~e~~~~~~~~g~~~~~~~~~~~~~~~~tr~lG~~~~~~~~~~~p~~~~ 192 (270)
+++++|++.++++|++ ....+..... .||... ..++...+
T Consensus 77 ~~~~aG~~~~l~~~~~~~~~~~~~~~~~---------------------------------~lG~~~-----~~~~~~~~ 118 (193)
T PF07228_consen 77 TYANAGHPPPLLLRPGGREIEQLESEGP---------------------------------PLGIFE-----DIDYQEQE 118 (193)
T ss_dssp EEEEESSSEEEEEETTCTEEEEETCSSB---------------------------------BCSSSC-----TTCEEEEE
T ss_pred EEeCCCCCCEEEEeccccceeecccCcc---------------------------------ceeeec-----cccccceE
Confidence 9999999999999983 2322322221 155422 14455678
Q ss_pred EEecCCCeEEEEEcCCCcCCCChH-------HHHHHHHc--CCCHHHHHHHHHHHHHHc---CCCCccEEEEEEcc
Q 024279 193 LEVDEGFELLVLASDGLWDVVPNE-------DAVALART--GEEPEIAARKLTETAFTR---GSADNITCIVVRFH 256 (270)
Q Consensus 193 ~~l~~~~d~lvl~SDGv~~~l~~~-------~i~~~~~~--~~~~~~~a~~l~~~a~~~---~~~Dn~Tvivi~~~ 256 (270)
+++.+| |+|+|+|||+++....+ .+.+++.+ ..++++.++.|.+.+... ...||+|+++++++
T Consensus 119 ~~l~~g-d~l~l~TDGl~e~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~DD~tvl~~~~~ 193 (193)
T PF07228_consen 119 IQLEPG-DRLLLYTDGLFEALNEDGEFFGEERLLELLDENRGLSPQEIIDALLEAIDRFGKGPLRDDITVLVIRRQ 193 (193)
T ss_dssp EE--TT-EEEEEECHHHCTTTCHHCHHCCCHHHHHHHHCHTTS-HHHHHHHHHHHHHHHTTSSTSS-EEEEEEEE-
T ss_pred EEeccc-cEEEEeCCChhhccCCccchhHHHHHHHHHhhccCCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEEEC
Confidence 899999 99999999999998433 44667763 578999999999998763 57899999999874
No 19
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]
Probab=98.98 E-value=1.2e-07 Score=83.87 Aligned_cols=181 Identities=17% Similarity=0.094 Sum_probs=120.4
Q ss_pred CCCccC------CCccEEEEEcCCCchHHHHHHHHHHHHHHHcCCCC-cccHHHHHHHHHHHHhHHHHhhccCCCCCCCC
Q 024279 30 AISNSS------YHVNLDRYKYGHGGSRAAEYLKEHLFENLLKHPQF-MTDTKLAISETYQQTDVDFLESERDTYRDDGS 102 (270)
Q Consensus 30 ~neD~~------~~~~~~~V~DG~GG~~~a~~a~~~~~~~l~~~~~~-~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~gt 102 (270)
...|.| .....++|.|..|-...|..........+...... .-++ ...++.+|+.+....... +-+
T Consensus 161 vGGD~yd~~~~~~~~~~i~I~DvsG~Gv~aal~m~~~~~~~~~~~~~~~~~p----~~~l~~~n~~~~~~~~~~---~f~ 233 (367)
T COG2208 161 VGGDYYDFIQLGEKRLRIGIGDVSGKGVPAALLMLMPKLALRLLLESGPLDP----ADVLETLNRVLKQNLEED---MFV 233 (367)
T ss_pred cCCceEEEEEECCcEEEEEEEeccCCCHHHHHHHHHHHHHHHHhhhcccCCH----HHHHHHHHHHHHhcccCC---cEE
Confidence 778888 46899999999994444433333332222221111 1122 235556666555544333 678
Q ss_pred eEEEEEEE--CCEEEEEEeccccEEEEeCCcc---ccCCCCCCCCChhHHHHHHHcCCeeeeCCceeecCeeeccccccc
Q 024279 103 TASTAILV--GNHLYVANVGDSRTVISKAGKA---IPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGN 177 (270)
Q Consensus 103 T~~~~~i~--~~~~~~a~vGDsr~~l~r~~~~---~~lt~dh~~~~~~e~~~~~~~~g~~~~~~~~~~~~~~~~tr~lG~ 177 (270)
|+..++++ .+.+.++++|---.++++.+.- ..+.. ....+|.
T Consensus 234 T~~~~~~d~~~~~l~y~~aGH~p~~i~~~~~~~~~~~l~~---------------------------------~g~piG~ 280 (367)
T COG2208 234 TLFLGVYDLDSGELTYSNAGHEPALILSADGEIEVEDLTA---------------------------------LGLPIGL 280 (367)
T ss_pred EEEEEEEeccCCEEEEeeCCCCCeeEEEcCCCceeEEccC---------------------------------CCceeee
Confidence 88888887 7899999999999999986542 22221 1333564
Q ss_pred ccCCCceeeeceEEEEEecCCCeEEEEEcCCCcC-------CCChHHHHHHHH--cCCCHHHHHHHHHHHHHHc----CC
Q 024279 178 RMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWD-------VVPNEDAVALAR--TGEEPEIAARKLTETAFTR----GS 244 (270)
Q Consensus 178 ~~~~~~~~~~p~~~~~~l~~~~d~lvl~SDGv~~-------~l~~~~i~~~~~--~~~~~~~~a~~l~~~a~~~----~~ 244 (270)
.. ...+.+....+.+| |.++|.|||+++ .+..+.+.+++. ...++++.++.+.+...+. ..
T Consensus 281 ~~-----~~~~~~~~~~l~~g-d~lvl~tDGv~Ea~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~i~~~l~~~~~~~~~ 354 (367)
T COG2208 281 LP-----DYQYEVASLQLEPG-DLLVLYTDGVTEARNSDGEFFGLERLLKILGRLLGQPAEEILEAILESLEELQGDQIQ 354 (367)
T ss_pred cC-----CccchheeEEecCC-CEEEEEcCCeeeeecCCccEecHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhCCccc
Confidence 32 35566778889997 999999999999 455666777776 3468888888888876543 34
Q ss_pred CCccEEEEEEcc
Q 024279 245 ADNITCIVVRFH 256 (270)
Q Consensus 245 ~Dn~Tvivi~~~ 256 (270)
.||+|++++++.
T Consensus 355 ~DDiTll~lk~~ 366 (367)
T COG2208 355 DDDITLLVLKVK 366 (367)
T ss_pred cCceEEEEEEec
Confidence 688999999975
No 20
>PRK10693 response regulator of RpoS; Provisional
Probab=91.45 E-value=2 Score=36.93 Aligned_cols=95 Identities=12% Similarity=-0.006 Sum_probs=55.9
Q ss_pred CCCccC------CCccEEEEEc--CCCchHH-HHHHHHHHHH-HHHcCC----CCcccHHHHHHHHHHHHhHHHHhhccC
Q 024279 30 AISNSS------YHVNLDRYKY--GHGGSRA-AEYLKEHLFE-NLLKHP----QFMTDTKLAISETYQQTDVDFLESERD 95 (270)
Q Consensus 30 ~neD~~------~~~~~~~V~D--G~GG~~~-a~~a~~~~~~-~l~~~~----~~~~~~~~~l~~~~~~~~~~i~~~~~~ 95 (270)
...|.+ ++...|.++| |||++.+ +......+.. .+.... ....+ ....+..+|+.+......
T Consensus 149 ~~GD~~d~~~l~~~~~~~~~~DvsGhg~hg~~aa~l~~~~~~~~~~~~~~~~~~~~~~----p~~~l~~lN~~l~~~~~~ 224 (303)
T PRK10693 149 KPGLVLDIAALSDNDLAFYCLDVTRAGDNGVLAALLLRALFNGLLQEQLAHQNQRLPE----LGALLKQVNHLLRQANLP 224 (303)
T ss_pred CCccEEeeeecCCCcEEEEEEecCCCCcccHHHHHHHHHHHHHHHHHHhcccccccCC----HHHHHHHHHHHHHhcCCC
Confidence 355555 6777888888 7664433 3333333333 333211 11112 345677777777655322
Q ss_pred CCCCCCCeEEEEEEE--CCEEEEEEeccccEEEEeCCcc
Q 024279 96 TYRDDGSTASTAILV--GNHLYVANVGDSRTVISKAGKA 132 (270)
Q Consensus 96 ~~~~~gtT~~~~~i~--~~~~~~a~vGDsr~~l~r~~~~ 132 (270)
. ..|+..++++ .+++.+++.|-...++..++.+
T Consensus 225 ~----~~t~~~~~~d~~~~~l~~~~AGhp~~~~~~~~~~ 259 (303)
T PRK10693 225 G----QFPLLVGYYHRELKNLILVSAGLNATLNTGEHQV 259 (303)
T ss_pred c----eeeEEEEEEEcCCCeEEEEeCCCCCEEecCCeEE
Confidence 2 2588888887 6789999999999885444433
No 21
>COG2168 DsrH Uncharacterized conserved protein involved in oxidation of intracellular sulfur [Inorganic ion transport and metabolism]
Probab=74.81 E-value=1.7 Score=30.30 Aligned_cols=49 Identities=27% Similarity=0.488 Sum_probs=32.6
Q ss_pred ecCCCeEEEEEcCCCcCCCChHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCCc
Q 024279 195 VDEGFELLVLASDGLWDVVPNEDAVALARTGEEPEIAARKLTETAFTRGSADN 247 (270)
Q Consensus 195 l~~~~d~lvl~SDGv~~~l~~~~i~~~~~~~~~~~~~a~~l~~~a~~~~~~Dn 247 (270)
++++ |.++|+.|||+-.+...+..+.++. +| ..+-.|.+...+||-.+.
T Consensus 22 l~~~-D~vlL~qdGV~aAl~~~~~~~sl~~--~p-~~~~alkeDl~ARGl~~~ 70 (96)
T COG2168 22 LTEG-DAVLLLQDGVYAALKGNRYLASLRE--SP-IKVYALKEDLLARGLTGQ 70 (96)
T ss_pred hccc-CeEEEEcccchhhhcCcHHHHHHhc--Cc-cceeeehhhHHhccchhh
Confidence 4455 9999999999999998887777766 22 223334445555554433
No 22
>PF09436 DUF2016: Domain of unknown function (DUF2016); InterPro: IPR018560 This entry represents the N-terminal of proteins that contain a ubiquitin domain.
Probab=62.22 E-value=5 Score=26.46 Aligned_cols=25 Identities=20% Similarity=0.145 Sum_probs=18.1
Q ss_pred ecCCCeEEEEEcCCCcCCCChHHHH
Q 024279 195 VDEGFELLVLASDGLWDVVPNEDAV 219 (270)
Q Consensus 195 l~~~~d~lvl~SDGv~~~l~~~~i~ 219 (270)
++..+.++++++||+|=.+....+.
T Consensus 23 l~~~G~Rllva~nGv~lEv~r~WL~ 47 (72)
T PF09436_consen 23 LERPGHRLLVASNGVFLEVRRPWLH 47 (72)
T ss_pred cccCCcEEEEecCcEEEEEechHHH
Confidence 4423499999999999776655544
No 23
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=50.27 E-value=34 Score=27.02 Aligned_cols=45 Identities=22% Similarity=0.331 Sum_probs=33.2
Q ss_pred CeEEEEEcCCCcC-----------CCChHHHHHHHHc----CCCHHHHHHHHHHHHHHcC
Q 024279 199 FELLVLASDGLWD-----------VVPNEDAVALART----GEEPEIAARKLTETAFTRG 243 (270)
Q Consensus 199 ~d~lvl~SDGv~~-----------~l~~~~i~~~~~~----~~~~~~~a~~l~~~a~~~~ 243 (270)
||.++..|.|||- +|.++.+=+.+.+ ..-|++.|+.|++.-.++|
T Consensus 71 DDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq~RG 130 (237)
T COG3700 71 DDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRG 130 (237)
T ss_pred CCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHHhcC
Confidence 4899999999985 4455555555554 3458999999999877765
No 24
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=34.65 E-value=70 Score=16.41 Aligned_cols=21 Identities=29% Similarity=0.507 Sum_probs=16.6
Q ss_pred EEEECCEEEEEEeccccEEEE
Q 024279 107 AILVGNHLYVANVGDSRTVIS 127 (270)
Q Consensus 107 ~~i~~~~~~~a~vGDsr~~l~ 127 (270)
++-.++.+|++-.|..|+..+
T Consensus 8 av~~~g~i~VaD~~n~rV~vf 28 (28)
T PF01436_consen 8 AVDSDGNIYVADSGNHRVQVF 28 (28)
T ss_dssp EEETTSEEEEEECCCTEEEEE
T ss_pred EEeCCCCEEEEECCCCEEEEC
Confidence 344788999999999988764
No 25
>PF06972 DUF1296: Protein of unknown function (DUF1296); InterPro: IPR009719 This family represents a conserved region approximately 60 residues long within a number of plant proteins of unknown function.
Probab=31.43 E-value=67 Score=20.27 Aligned_cols=27 Identities=19% Similarity=0.332 Sum_probs=22.3
Q ss_pred CCChHHHHHHHHc-CCCHHHHHHHHHHH
Q 024279 212 VVPNEDAVALART-GEEPEIAARKLTET 238 (270)
Q Consensus 212 ~l~~~~i~~~~~~-~~~~~~~a~~l~~~ 238 (270)
..++++|..+|.. ..+|.+++++|+.+
T Consensus 18 ~hse~eIya~L~ecnMDpnea~qrLL~q 45 (60)
T PF06972_consen 18 CHSEEEIYAMLKECNMDPNEAVQRLLSQ 45 (60)
T ss_pred CCCHHHHHHHHHHhCCCHHHHHHHHHhc
Confidence 3578999999977 67999999998873
No 26
>PF04077 DsrH: DsrH like protein; InterPro: IPR007215 The three proteins TusB, TusC, and TusD form a heterohexamer responsible for a sulphur relay reaction. In large numbers of proteobacterial species, this complex acts on a Cys-derived persulphide moiety, delivered by the cysteine desulphurase IscS to TusA, then to TusBCD. The activated sulphur group is then transferred to TusE (DsrC), then by MnmA (TrmU) for modification of an anticodon nucleotide in tRNAs for Glu, Lys, and Gln. The sulphur relay complex TusBCD is also found, under the designation DsrEFH, in phototrophic and chemotrophic sulphur bacteria, such as Chromatium vinosum. In these organisms, it seems the primary purpose is related to sulphur flux, such as oxidation from sulphide to molecular sulphur to sulphate [].; GO: 0002143 tRNA wobble position uridine thiolation, 0005737 cytoplasm; PDB: 2HYB_O 2HY5_C 1X9A_A 1RHX_A 2D1P_C.
Probab=28.62 E-value=14 Score=25.44 Aligned_cols=25 Identities=16% Similarity=0.324 Sum_probs=18.4
Q ss_pred CeEEEEEcCCCcCCCChHHHHHHHH
Q 024279 199 FELLVLASDGLWDVVPNEDAVALAR 223 (270)
Q Consensus 199 ~d~lvl~SDGv~~~l~~~~i~~~~~ 223 (270)
+|.|||.-|||+..+........+.
T Consensus 19 ~D~ilLiqDgV~~a~~~~~~~~~l~ 43 (88)
T PF04077_consen 19 GDAILLIQDGVYAALKGSPYFKLLQ 43 (88)
T ss_dssp T-EEEE-GGGGGGGBTTSTTHHHHH
T ss_pred CCEEEeeHHHHHHHhcCCHHHHHHh
Confidence 4999999999999888776666654
No 27
>TIGR03735 PRTRC_A PRTRC system protein A. A novel genetic system characterized by six major proteins, included a ParB homolog and a ThiF homolog, is designated PRTRC, or ParB-Related,ThiF-Related Cassette. It is often found on plasmids. This protein family is designated protein A.
Probab=25.08 E-value=1.9e+02 Score=23.15 Aligned_cols=49 Identities=20% Similarity=0.274 Sum_probs=33.6
Q ss_pred ecCCCeEEEEEcCCCcCCCChHHHHHHHHcC---------------------CCHHHHHHHHHHHHHHcC
Q 024279 195 VDEGFELLVLASDGLWDVVPNEDAVALARTG---------------------EEPEIAARKLTETAFTRG 243 (270)
Q Consensus 195 l~~~~d~lvl~SDGv~~~l~~~~i~~~~~~~---------------------~~~~~~a~~l~~~a~~~~ 243 (270)
++..+..+++++||+|=.+....+.-+..-. .=+....++++..|.+..
T Consensus 22 l~~~g~r~~~a~~G~~lev~r~wl~~~~~~~~~~~~~~PYg~~~~~~~~~~g~Ip~~l~~~ii~hAr~~~ 91 (192)
T TIGR03735 22 LEKPGHRFIVAADGVWREVRRPWLHAIQRVAPASPITVPYGAVEETLEFLCGPIPASLLEEFAEAARAAL 91 (192)
T ss_pred cccCCcEEEEecCcEEEEEecHHHHHHHHhcccccccccceeeeeeEEEecCCCCHHHHHHHHHHHHhcC
Confidence 4443499999999999888777665544211 124667788888877643
No 28
>PF14014 DUF4230: Protein of unknown function (DUF4230)
Probab=23.80 E-value=3e+02 Score=20.66 Aligned_cols=40 Identities=23% Similarity=0.345 Sum_probs=27.9
Q ss_pred eeeceEEEEEecCCCeEEEEEcCCCcCCCChHHHHHHHHc
Q 024279 185 VAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALART 224 (270)
Q Consensus 185 ~~~p~~~~~~l~~~~d~lvl~SDGv~~~l~~~~i~~~~~~ 224 (270)
.|+|.+....++.+.-.++-...|+|+.++.++..++.+.
T Consensus 75 LP~~~i~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (157)
T PF14014_consen 75 LPPPEILSVEIDEDSIKVYDEKGGWFNPITPEDQNEAQKE 114 (157)
T ss_pred CCCcEEeeeecCccceEEEEccCCccCCCCHHHHHHHHHH
Confidence 4677777777776634555688889888887777666644
No 29
>cd00534 DHNA_DHNTPE Dihydroneopterin aldolase (DHNA) and 7,8-dihydroneopterin triphosphate epimerase domain (DHNTPE); these enzymes have been designated folB and folX, respectively. Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is DHNA which catalyses the conversion of 7,8-dihydroneopterin to 6-hydroxymethyl-7,8-dihydropterin in the biosynthetic pathway of tetrahydrofolate. Though it is known that DHNTPE catalyzes the epimerization of dihydroneopterin triphosphate to dihydromonapterin triphosphate, the biological role of this enzyme is still unclear. It is hypothesized that it is not an essential protein since a folX knockout in E. coli has a normal phenoty
Probab=21.13 E-value=3.2e+02 Score=19.52 Aligned_cols=54 Identities=19% Similarity=0.203 Sum_probs=36.5
Q ss_pred EEcCCCcCCCChHHHHHHHHc------CCCHHHHHHHHHHHHHHcCCCCccEEEEEEccCCC
Q 024279 204 LASDGLWDVVPNEDAVALART------GEEPEIAARKLTETAFTRGSADNITCIVVRFHHVN 259 (270)
Q Consensus 204 l~SDGv~~~l~~~~i~~~~~~------~~~~~~~a~~l~~~a~~~~~~Dn~Tvivi~~~~~~ 259 (270)
-.||-+-+.++...+.+.+.+ ....+.+|+.|.+..+.. .+.+.-+-+++.++.
T Consensus 42 ~~~D~l~~tidY~~l~~~i~~~~~~~~~~llE~La~~ia~~i~~~--~~~v~~v~v~v~K~~ 101 (118)
T cd00534 42 GESDDLADTLNYAEVAKLIKKIVEGSPFKLIETLAEEIADILLED--YPKVSAIKVKVEKPN 101 (118)
T ss_pred hccCChhhccCHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHh--CCCceEEEEEEECCC
Confidence 467888888887777666533 345778888888888765 244555666666544
Done!