BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024280
(269 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3OLH|A Chain A, Human 3-Mercaptopyruvate Sulfurtransferase
Length = 302
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/199 (38%), Positives = 105/199 (52%), Gaps = 26/199 (13%)
Query: 77 VVSVDWLHANLREP----DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
+VS W+ LR P L++LDASWY+P R+ +E++ HIPGA FFD+D +DRT
Sbjct: 23 MVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAAFFDIDQCSDRT 82
Query: 133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDG--KGIFSAARVWWMFRVFGHDRVWVLD 190
+ HMLP E FA LG+ +V+YD +G++SA RVWWMFR FGH V +LD
Sbjct: 83 SPYDHMLPGAEHFAEYAGRLGVGAATHVVIYDASDQGLYSAPRVWWMFRAFGHHAVSLLD 142
Query: 191 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVGPTTFQTKFQPHLIWTLEQV 250
GGL W + S S Q P F+ + P I T E +
Sbjct: 143 GGLRHWLRQNLPLSSGKS--------------------QPAPAEFRAQLDPAFIKTYEDI 182
Query: 251 KRNIEEGTYQLVDARSKAR 269
K N+E +Q+VD+R+ R
Sbjct: 183 KENLESRRFQVVDSRATGR 201
>pdb|1ORB|A Chain A, Active Site Structural Features For Chemically Modified
Forms Of Rhodanese
Length = 296
Score = 135 bits (339), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 104/199 (52%), Gaps = 27/199 (13%)
Query: 77 VVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
+VS WL ++R P L+VLDASWY P R +EY H+PGA FFD++ D+
Sbjct: 9 LVSTKWLAESVRAGKVGPGLRVLDASWYSPG-TREARKEYLERHVPGASFFDIEECRDKA 67
Query: 133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLD 190
+ MLPSE FA V +LG+ N +VVYDG G F A RVWWMFRVFGH V VL+
Sbjct: 68 SPYEVMLPSEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLN 127
Query: 191 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVGPTTFQTKFQPHLIWTLEQV 250
GG W G+ V S S + P F+ L+ T EQV
Sbjct: 128 GGFRNWLKEGHPVTSEPS--------------------RPEPAIFKATLNRSLLKTYEQV 167
Query: 251 KRNIEEGTYQLVDARSKAR 269
N+E +QLVD+R++ R
Sbjct: 168 LENLESKRFQLVDSRAQGR 186
>pdb|1DP2|A Chain A, Crystal Structure Of The Complex Between Rhodanese And
Lipoate
Length = 293
Score = 134 bits (338), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 104/199 (52%), Gaps = 27/199 (13%)
Query: 77 VVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
+VS WL ++R P L+VLDASWY P R +EY H+PGA FFD++ D+
Sbjct: 9 LVSTKWLAESVRAGKVGPGLRVLDASWYSPG-TREARKEYLERHVPGASFFDIEECRDKA 67
Query: 133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLD 190
+ MLPSE FA V +LG+ N +VVYDG G F A RVWWMFRVFGH V VL+
Sbjct: 68 SPYEVMLPSEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLN 127
Query: 191 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVGPTTFQTKFQPHLIWTLEQV 250
GG W G+ V S S + P F+ L+ T EQV
Sbjct: 128 GGFRNWLKEGHPVTSEPS--------------------RPEPAIFKATLNRSLLKTYEQV 167
Query: 251 KRNIEEGTYQLVDARSKAR 269
N+E +QLVD+R++ R
Sbjct: 168 LENLESKRFQLVDSRAQGR 186
>pdb|1RHS|A Chain A, Sulfur-Substituted Rhodanese
Length = 296
Score = 134 bits (338), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 104/199 (52%), Gaps = 27/199 (13%)
Query: 77 VVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
+VS WL ++R P L+VLDASWY P R +EY H+PGA FFD++ D+
Sbjct: 9 LVSTKWLAESVRAGKVGPGLRVLDASWYSPG-TREARKEYLERHVPGASFFDIEECRDKA 67
Query: 133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLD 190
+ MLPSE FA V +LG+ N +VVYDG G F A RVWWMFRVFGH V VL+
Sbjct: 68 SPYEVMLPSEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLN 127
Query: 191 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVGPTTFQTKFQPHLIWTLEQV 250
GG W G+ V S S + P F+ L+ T EQV
Sbjct: 128 GGFRNWLKEGHPVTSEPS--------------------RPEPAIFKATLNRSLLKTYEQV 167
Query: 251 KRNIEEGTYQLVDARSKAR 269
N+E +QLVD+R++ R
Sbjct: 168 LENLESKRFQLVDSRAQGR 186
>pdb|1BOH|A Chain A, Sulfur-Substituted Rhodanese (Orthorhombic Form)
pdb|1BOI|A Chain A, N-Terminally Truncated Rhodanese
pdb|2ORA|A Chain A, Rhodanese (Thiosulfate: Cyanide Sulfurtransferase)
Length = 296
Score = 134 bits (338), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 104/199 (52%), Gaps = 27/199 (13%)
Query: 77 VVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
+VS WL ++R P L+VLDASWY P R +EY H+PGA FFD++ D+
Sbjct: 9 LVSTKWLAESVRAGKVGPGLRVLDASWYSPG-TREARKEYLERHVPGASFFDIEECRDKA 67
Query: 133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLD 190
+ MLPSE FA V +LG+ N +VVYDG G F A RVWWMFRVFGH V VL+
Sbjct: 68 SPYEVMLPSEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLN 127
Query: 191 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVGPTTFQTKFQPHLIWTLEQV 250
GG W G+ V S S + P F+ L+ T EQV
Sbjct: 128 GGFRNWLKEGHPVTSEPS--------------------RPEPAIFKATLNRSLLKTYEQV 167
Query: 251 KRNIEEGTYQLVDARSKAR 269
N+E +QLVD+R++ R
Sbjct: 168 LENLESKRFQLVDSRAQGR 186
>pdb|1RHD|A Chain A, Structure Of Bovine Liver Rhodanese. I. Structure
Determination At 2.5 Angstroms Resolution And A
Comparison Of The Conformation And Sequence Of Its Two
Domains
Length = 293
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 104/199 (52%), Gaps = 27/199 (13%)
Query: 77 VVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
+VS WL ++R P L+VLDASWY P R +EY H+PGA FFD++ D+
Sbjct: 9 LVSTKWLAESVRAGKVGPGLRVLDASWYSPG-TREARKEYLERHVPGASFFDIEECRDKA 67
Query: 133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLD 190
+ MLPSE FA V +LG+ N +VVY+G G F A RVWWMFRVFGH V VL+
Sbjct: 68 SPYEVMLPSEAGFADYVGSLGISNDTHVVVYNGDDLGSFYAPRVWWMFRVFGHRTVSVLN 127
Query: 191 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVGPTTFQTKFQPHLIWTLEQV 250
GG W G+ V S S + P F+ L+ T EQV
Sbjct: 128 GGFRNWLKEGHPVTSEPS--------------------RPEPAIFKATLNRSLLKTYEQV 167
Query: 251 KRNIEEGTYQLVDARSKAR 269
N+E +QLVD+R++ R
Sbjct: 168 LENLESKRFQLVDSRAQGR 186
>pdb|1URH|A Chain A, The "rhodanese" Fold And Catalytic Mechanism Of
3-Mercaptopyruvate Sulfotransferases: Crystal Structure
Of Ssea From Escherichia Coli
pdb|1URH|B Chain B, The "rhodanese" Fold And Catalytic Mechanism Of
3-Mercaptopyruvate Sulfotransferases: Crystal Structure
Of Ssea From Escherichia Coli
Length = 280
Score = 130 bits (326), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 100/193 (51%), Gaps = 21/193 (10%)
Query: 78 VSVDWLHANLREPDLKVLDASWYMP-DEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLP 136
V DWL ++ +P+++++DA P E RN QEY HIPGA+FFD++ ++D T+ LP
Sbjct: 6 VGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLP 65
Query: 137 HMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRW 196
HMLP E FA A+ LG+ L+VYD +FSA R WWM R FG ++V +L GGL W
Sbjct: 66 HMLPRPETFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGW 125
Query: 197 RASGYDVESSASGDAILKASAASEAIEKVYQGQVGPTTFQTKFQPHLIWTLEQVKRNIEE 256
+ D +L A E E F F P + + V E
Sbjct: 126 QR-----------DDLLLEEGAVELPEG---------EFNAAFNPEAVVKVTDVLLASHE 165
Query: 257 GTYQLVDARSKAR 269
T Q++DAR AR
Sbjct: 166 NTAQIIDARPAAR 178
>pdb|3UTN|X Chain X, Crystal Structure Of Tum1 Protein From Saccharomyces
Cerevisiae
Length = 327
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 88/176 (50%), Gaps = 12/176 (6%)
Query: 95 LDASWYMPD-EQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG 153
+DA+WY+P + N IP ++FFD+D ++D+ + PHM P+++ F A+S LG
Sbjct: 50 VDATWYLPSWKLDNKVDFLTKPRIPNSIFFDIDAISDKKSPYPHMFPTKKVFDDAMSNLG 109
Query: 154 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAIL 213
++ D LVVYD G FS+ R W V GH +V++L+ ++R Y ++SS
Sbjct: 110 VQKDDILVVYDRVGNFSSPRCAWTLGVMGHPKVYLLN-NFNQYREFKYPLDSS------- 161
Query: 214 KASAASEAIEKVYQGQVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKAR 269
K +A S + Y+ +FQ K + VK + DARS R
Sbjct: 162 KVAAFSPYPKSHYESS---ESFQDKEIVDYEEMFQLVKSGELAKKFNAFDARSLGR 214
>pdb|3P3A|A Chain A, Crystal Structure Of A Putative Thiosulfate
Sulfurtransferase From Mycobacterium Thermoresistible
pdb|3P3A|B Chain B, Crystal Structure Of A Putative Thiosulfate
Sulfurtransferase From Mycobacterium Thermoresistible
Length = 320
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 63/129 (48%), Gaps = 10/129 (7%)
Query: 75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTN 134
E +V+ DWL +NL P L ++++ DE Y HIPGA+ +D D
Sbjct: 40 ERLVTADWLASNLGRPGLVIVES-----DED---VLLYDTGHIPGAV--KIDWHTDLNDP 89
Query: 135 LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 194
+ E FAA + G+ D +V+Y K + AA W+F +FGH V +LDGG
Sbjct: 90 AVRDYINGEQFAALMDRKGVTRDDTVVIYGDKSNWWAAYAMWVFHLFGHPDVRLLDGGRD 149
Query: 195 RWRASGYDV 203
W ++G D
Sbjct: 150 LWVSTGRDT 158
>pdb|3AAX|A Chain A, Crystal Structure Of Probable Thiosulfate
Sulfurtransferase Cysa3 (Rv3117) From Mycobacterium
Tuberculosis: Monoclinic Form
pdb|3AAX|B Chain B, Crystal Structure Of Probable Thiosulfate
Sulfurtransferase Cysa3 (Rv3117) From Mycobacterium
Tuberculosis: Monoclinic Form
Length = 277
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 10/124 (8%)
Query: 77 VVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLP 136
+VS DW +NL P + ++ DE + Y HI GA+ +D D +
Sbjct: 7 LVSADWAESNLHAPKVVFVEV-----DEDTSA---YDRDHIAGAI--KLDWRTDLQDPVK 56
Query: 137 HMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRW 196
+ F+ +S G+ N+D +++Y G + AA +W F+++GH++V +LDGG +W
Sbjct: 57 RDFVDAQQFSKLLSERGIANEDTVILYGGNNNWFAAYAYWYFKLYGHEKVKLLDGGRKKW 116
Query: 197 RASG 200
G
Sbjct: 117 ELDG 120
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 15/110 (13%)
Query: 86 NLREPDL---KVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSE 142
++R PD K+L A ++P EQ + HIPGA ++ R N S+
Sbjct: 162 DVRSPDEFSGKIL-APAHLPQEQSQ-----RPGHIPGA----INVPWSRAANEDGTFKSD 211
Query: 143 EAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFR-VFGHDRVWVLDG 191
E A + GL+N + Y G S + W++ R + GH V DG
Sbjct: 212 EELAKLYADAGLDNSKETIAYCRIGERS-SHTWFVLRELLGHQNVKNYDG 260
>pdb|3AAY|A Chain A, Crystal Structure Of Probable Thiosulfate
Sulfurtransferase Cysa3 (Rv3117) From Mycobacterium
Tuberculosis: Orthorhombic Form
pdb|3AAY|B Chain B, Crystal Structure Of Probable Thiosulfate
Sulfurtransferase Cysa3 (Rv3117) From Mycobacterium
Tuberculosis: Orthorhombic Form
Length = 277
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 10/124 (8%)
Query: 77 VVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLP 136
+VS DW +NL P + ++ DE + Y HI GA+ +D D +
Sbjct: 7 LVSADWAESNLHAPKVVFVEV-----DEDTSA---YDRDHIAGAI--KLDWRTDLQDPVK 56
Query: 137 HMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRW 196
+ F+ +S G+ N+D +++Y G + AA +W F+++GH++V +LDGG +W
Sbjct: 57 RDFVDAQQFSKLLSERGIANEDTVILYGGNNNWFAAYAYWYFKLYGHEKVKLLDGGRKKW 116
Query: 197 RASG 200
G
Sbjct: 117 ELDG 120
Score = 30.8 bits (68), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 15/110 (13%)
Query: 86 NLREPDL---KVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSE 142
++R PD K+L A ++P EQ + HIPGA ++ R N S+
Sbjct: 162 DVRSPDEFSGKIL-APAHLPQEQSQ-----RPGHIPGA----INVPWSRAANEDGTFKSD 211
Query: 143 EAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFR-VFGHDRVWVLDG 191
E A + GL+N + Y G S + W++ R + GH V DG
Sbjct: 212 EELAKLYADAGLDNSKETIAYXRIGERS-SHTWFVLRELLGHQNVKNYDG 260
>pdb|3HWI|A Chain A, Crystal Structure Of Probable Thiosulfate
Sulfurtransferase Cysa2 (Rhodanese-Like Protein) From
Mycobacterium Tuberculosis
pdb|3HWI|B Chain B, Crystal Structure Of Probable Thiosulfate
Sulfurtransferase Cysa2 (Rhodanese-Like Protein) From
Mycobacterium Tuberculosis
Length = 298
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 10/124 (8%)
Query: 77 VVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLP 136
+VS DW +NL P + ++ DE + Y HI GA+ +D D +
Sbjct: 28 LVSADWAESNLHAPKVVFVEV-----DEDTSA---YDRDHIAGAI--KLDWRTDLQDPVK 77
Query: 137 HMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRW 196
+ F+ +S G+ N+D +++Y G + AA +W F+++GH++V +LDGG +W
Sbjct: 78 RDFVDAQQFSKLLSERGIANEDTVILYGGNNNWFAAYAYWYFKLYGHEKVKLLDGGRKKW 137
Query: 197 RASG 200
G
Sbjct: 138 ELDG 141
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 15/110 (13%)
Query: 86 NLREPDL---KVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSE 142
++R PD K+L A ++P EQ + HIPGA ++ R N S+
Sbjct: 183 DVRSPDEFSGKIL-APAHLPQEQSQ-----RPGHIPGA----INVPWSRAANEDGTFKSD 232
Query: 143 EAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFR-VFGHDRVWVLDG 191
E A + GL+N + Y G S + W++ R + GH V DG
Sbjct: 233 EELAKLYADAGLDNSKETIAYCRIGERS-SHTWFVLRELLGHQNVKNYDG 281
>pdb|1UAR|A Chain A, Crystal Structure Of Rhodanese From Thermus Thermophilus
Hb8
Length = 285
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 59/126 (46%), Gaps = 10/126 (7%)
Query: 75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTN 134
E +VS DW+ +L +P ++VL+ DE Y HIPGA +D D
Sbjct: 7 EVLVSTDWVQEHLEDPKVRVLEV-----DED---ILLYDTGHIPGAQ--KIDWQRDFWDP 56
Query: 135 LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 194
+ SEE FA LG+ N +V+Y K + AA +W F+ GH V + +GG
Sbjct: 57 VVRDFISEEEFAKLXERLGISNDTTVVLYGDKNNWWAAYAFWFFKYNGHKDVRLXNGGRQ 116
Query: 195 RWRASG 200
+W G
Sbjct: 117 KWVEEG 122
>pdb|3HZU|A Chain A, Crystal Structure Of Probable Thiosulfate
Sulfurtransferase Ssea (Rhodanese) From Mycobacterium
Tuberculosis
Length = 318
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 10/125 (8%)
Query: 75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTN 134
E +V+ DWL A++ P L ++++ DE Y V HIPGA+ +D D
Sbjct: 39 ERLVTADWLSAHMGAPGLAIVES-----DED---VLLYDVGHIPGAV--KIDWHTDLNDP 88
Query: 135 LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 194
+ E FA + G+ D +V+Y K + AA W+F +FGH V +L+GG
Sbjct: 89 RVRDYINGEQFAELMDRKGIARDDTVVIYGDKSNWWAAYALWVFTLFGHADVRLLNGGRD 148
Query: 195 RWRAS 199
W A
Sbjct: 149 LWLAE 153
>pdb|1H4K|X Chain X, Sulfurtransferase From Azotobacter Vinelandii In Complex
With Hypophosphite
pdb|1H4M|X Chain X, Sulfurtransferase From Azotobacter Vinelandii In Complex
With Phosphate
Length = 271
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 46/116 (39%), Gaps = 9/116 (7%)
Query: 83 LHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSE 142
L A L P+L ++D + Y HIPGA F D P + P
Sbjct: 16 LQARLSAPELILVDLT---------SAARYAEGHIPGARFVDPKRTQLGQPPAPGLQPPR 66
Query: 143 EAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA 198
E + LG + VVYD +G A R W+ V G R L+GGL W A
Sbjct: 67 EQLESLFGELGHRPEAVYVVYDDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLA 122
>pdb|1E0C|A Chain A, Sulfurtransferase From Azotobacter Vinelandii
Length = 271
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 46/116 (39%), Gaps = 9/116 (7%)
Query: 83 LHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSE 142
L A L P+L ++D + Y HIPGA F D P + P
Sbjct: 16 LQARLSAPELILVDLT---------SAARYAEGHIPGARFVDPKRTQLGQPPAPGLQPPR 66
Query: 143 EAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA 198
E + LG + VVYD +G A R W+ V G R L+GGL W A
Sbjct: 67 EQLESLFGELGHRPEAVYVVYDDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLA 122
>pdb|2WLX|A Chain A, Putative Thiosulfate Sulfurtransferase Ynje
Length = 423
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 11/114 (9%)
Query: 91 DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVS 150
D KV++A+W P + Y ++HIPGA + D + V + L + + S+E A ++
Sbjct: 147 DWKVIEAAWGAP-------KLYLISHIPGADYIDTNEV--ESEPLWNKV-SDEQLKAMLA 196
Query: 151 ALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVE 204
G+ + +++Y G+ +++AARV + G V +LDGG W +G VE
Sbjct: 197 KHGIRHDTTVILY-GRDVYAAARVAQIMLYAGVKDVRLLDGGWQTWSDAGLPVE 249
>pdb|3IPP|A Chain A, Crystal Structure Of Sulfur-Free Ynje
pdb|3IPP|B Chain B, Crystal Structure Of Sulfur-Free Ynje
Length = 416
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 11/114 (9%)
Query: 91 DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVS 150
D KV++A+W P + Y ++HIPGA + D + V + L + + S+E A ++
Sbjct: 148 DWKVIEAAWGAP-------KLYLISHIPGADYIDTNEV--ESEPLWNKV-SDEQLKAMLA 197
Query: 151 ALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVE 204
G+ + +++Y G+ +++AARV + G V +LDGG W +G VE
Sbjct: 198 KHGIRHDTTVILY-GRDVYAAARVAQIMLYAGVKDVRLLDGGWQTWSDAGLPVE 250
>pdb|3IPO|A Chain A, Crystal Structure Of Ynje
pdb|3IPO|B Chain B, Crystal Structure Of Ynje
Length = 416
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 11/114 (9%)
Query: 91 DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVS 150
D KV++A+W P + Y ++HIPGA + D + V + L + + S+E A ++
Sbjct: 148 DWKVIEAAWGAP-------KLYLISHIPGADYIDTNEV--ESEPLWNKV-SDEQLKAMLA 197
Query: 151 ALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVE 204
G+ + +++Y G+ +++AARV + G V +LDGG W +G VE
Sbjct: 198 KHGIRHDTTVILY-GRDVYAAARVAQIMLYAGVKDVRLLDGGWQTWSDAGLPVE 250
>pdb|2WLR|A Chain A, Putative Thiosulfate Sulfurtransferase Ynje
Length = 423
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 11/114 (9%)
Query: 91 DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVS 150
D KV++A+W P + Y ++HIPGA + D + V + L + + S+E A ++
Sbjct: 147 DWKVIEAAWGAP-------KLYLISHIPGADYIDTNEV--ESEPLWNKV-SDEQLKAXLA 196
Query: 151 ALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVE 204
G+ + +++Y G+ +++AARV + G V +LDGG W +G VE
Sbjct: 197 KHGIRHDTTVILY-GRDVYAAARVAQIXLYAGVKDVRLLDGGWQTWSDAGLPVE 249
>pdb|2KL3|A Chain A, Solution Nmr Structure Of The Rhodanese-Like Domain From
Anabaena Sp Alr3790 Protein. Northeast Structural
Genomics Consortium Target Nsr437a
Length = 132
Score = 28.9 bits (63), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 35/89 (39%), Gaps = 19/89 (21%)
Query: 112 YQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSA 171
Y HI GA+ ++ + DR ++ LE + VY G G
Sbjct: 32 YNDGHIMGAMAMPIEDLVDRASS------------------SLEKSRDIYVY-GAGDEQT 72
Query: 172 ARVWWMFRVFGHDRVWVLDGGLPRWRASG 200
++ + R G + V L GGL W+A G
Sbjct: 73 SQAVNLLRSAGFEHVSELKGGLAAWKAIG 101
>pdb|1YT8|A Chain A, Crystal Structure Of Thiosulfate Sulfurtransferase From
Pseudomonas Aeruginosa
Length = 539
Score = 27.7 bits (60), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Query: 186 VWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVGPTTFQTKFQPHLIW 245
V++LDGG W A+G E S L AS + + Y+G P + Q +L W
Sbjct: 458 VFLLDGGTSAWVAAGLPTEDGES----LLASPRIDRYRRPYEGTDNP---REAXQGYLDW 510
Query: 246 TLEQVKRNIEEGTY 259
V++ +GT+
Sbjct: 511 EFGLVEQLGRDGTH 524
>pdb|3K9R|A Chain A, X-Ray Structure Of The Rhodanese-Like Domain Of The
Alr3790 Protein From Anabaena Sp. Northeast Structural
Genomics Consortium Target Nsr437c.
pdb|3K9R|B Chain B, X-Ray Structure Of The Rhodanese-Like Domain Of The
Alr3790 Protein From Anabaena Sp. Northeast Structural
Genomics Consortium Target Nsr437c.
pdb|3K9R|C Chain C, X-Ray Structure Of The Rhodanese-Like Domain Of The
Alr3790 Protein From Anabaena Sp. Northeast Structural
Genomics Consortium Target Nsr437c.
pdb|3K9R|D Chain D, X-Ray Structure Of The Rhodanese-Like Domain Of The
Alr3790 Protein From Anabaena Sp. Northeast Structural
Genomics Consortium Target Nsr437c
Length = 115
Score = 27.3 bits (59), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 46/134 (34%), Gaps = 30/134 (22%)
Query: 73 PKEPVVSVDWLHANLR--EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVAD 130
P EP L + L EP +LD Y HI GA ++ + D
Sbjct: 2 PIEPQSDAHVLKSRLEWGEPAFTILDV---------RDRSTYNDGHIXGAXAXPIEDLVD 52
Query: 131 RTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLD 190
R ++ LE + VY G G ++ + R G + V L
Sbjct: 53 RASS------------------SLEKSRDIYVY-GAGDEQTSQAVNLLRSAGFEHVSELK 93
Query: 191 GGLPRWRASGYDVE 204
GGL W+A G E
Sbjct: 94 GGLAAWKAIGGPTE 107
>pdb|3FS5|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Ygr203w, A
Homolog Of Single-Domain Rhodanese And Cdc25 Phosphatase
Catalytic Domain
Length = 152
Score = 27.3 bits (59), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 185 RVWVLDGGLPRWRASGYDVESSASG 209
R+WVL GG RW++ D ES +G
Sbjct: 117 RLWVLRGGFSRWQSVYGDDESVTAG 141
>pdb|3ILM|A Chain A, Crystal Structure Of The Alr3790 Protein From Anabaena Sp.
Northeast Structural Genomics Consortium Target Nsr437h
pdb|3ILM|B Chain B, Crystal Structure Of The Alr3790 Protein From Anabaena Sp.
Northeast Structural Genomics Consortium Target Nsr437h
pdb|3ILM|C Chain C, Crystal Structure Of The Alr3790 Protein From Anabaena Sp.
Northeast Structural Genomics Consortium Target Nsr437h
pdb|3ILM|D Chain D, Crystal Structure Of The Alr3790 Protein From Anabaena Sp.
Northeast Structural Genomics Consortium Target Nsr437h
Length = 141
Score = 27.3 bits (59), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 34/89 (38%), Gaps = 19/89 (21%)
Query: 112 YQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSA 171
Y HI GA ++ + DR ++ LE + VY G G
Sbjct: 29 YNDGHIXGAXAXPIEDLVDRASS------------------SLEKSRDIYVY-GAGDEQT 69
Query: 172 ARVWWMFRVFGHDRVWVLDGGLPRWRASG 200
++ + R G + V L GGL W+A G
Sbjct: 70 SQAVNLLRSAGFEHVSELKGGLAAWKAIG 98
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.133 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,576,076
Number of Sequences: 62578
Number of extensions: 298510
Number of successful extensions: 797
Number of sequences better than 100.0: 27
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 739
Number of HSP's gapped (non-prelim): 33
length of query: 269
length of database: 14,973,337
effective HSP length: 97
effective length of query: 172
effective length of database: 8,903,271
effective search space: 1531362612
effective search space used: 1531362612
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)