Your job contains 1 sequence.
>024283
MASLTSVAFTSIGQTSCQRKVNVSSTRSLVSNFEGFRFRTSLFCHCVRFRASSSSSRMII
QCMSTATDVPPTVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFAL
GFVTVYDRLMEGYPSEEDREAIFQAYITALKEDPEQYRIDAQKLEEWARGQTASSLVEFP
SKEGEVEGLLKDIAERASGKGNFSYSRFFAVGLFRLLELANATEPTVLEKLCAVLNVNKR
SVDRDLDVYRNLLSKLLQAKELLKEYVDR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 024283
(269 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2051353 - symbol:PSB29 "AT2G20890" species:370... 836 1.9e-83 1
UNIPROTKB|P73956 - symbol:thf1 "Protein thf1" species:111... 260 2.1e-22 1
>TAIR|locus:2051353 [details] [associations]
symbol:PSB29 "AT2G20890" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0010027 "thylakoid membrane
organization" evidence=IEA;RCA;IMP] [GO:0015979 "photosynthesis"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
[GO:0010319 "stromule" evidence=IDA] [GO:0045037 "protein import
into chloroplast stroma" evidence=IDA] [GO:0045038 "protein import
into chloroplast thylakoid membrane" evidence=IDA] [GO:0009534
"chloroplast thylakoid" evidence=ISS;IDA] [GO:0010207 "photosystem
II assembly" evidence=RCA;TAS] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IPI] [GO:0009527 "plastid outer membrane" evidence=IDA]
[GO:0009528 "plastid inner membrane" evidence=IDA] [GO:0009532
"plastid stroma" evidence=IDA] [GO:0010182 "sugar mediated
signaling pathway" evidence=IMP] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0006417 "regulation of translation" evidence=RCA]
[GO:0006655 "phosphatidylglycerol biosynthetic process"
evidence=RCA] [GO:0009657 "plastid organization" evidence=RCA]
[GO:0009773 "photosynthetic electron transport in photosystem I"
evidence=RCA] [GO:0009902 "chloroplast relocation" evidence=RCA]
[GO:0019288 "isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=RCA] [GO:0034660 "ncRNA
metabolic process" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] [GO:0042742 "defense response to
bacterium" evidence=RCA] [GO:0042793 "transcription from plastid
promoter" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] InterPro:IPR017499
Pfam:PF11264 GO:GO:0016021 GO:GO:0009570 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0007186 GO:GO:0009941 GO:GO:0010027
GO:GO:0010182 GO:GO:0009535 GO:GO:0045038 GO:GO:0010319
GO:GO:0009707 GO:GO:0009523 GO:GO:0009528 EMBL:AC006234
GO:GO:0045037 GO:GO:0010207 GO:GO:0009527 EMBL:AY899908
EMBL:AY062799 EMBL:AY081596 EMBL:AY087394 IPI:IPI00539838
PIR:F84594 RefSeq:NP_565491.1 UniGene:At.46381 UniGene:At.48498
IntAct:Q9SKT0 STRING:Q9SKT0 PaxDb:Q9SKT0 PRIDE:Q9SKT0
EnsemblPlants:AT2G20890.1 GeneID:816623 KEGG:ath:AT2G20890
TAIR:At2g20890 eggNOG:NOG08111 HOGENOM:HOG000232762
InParanoid:Q9SKT0 OMA:MHLLSVN PhylomeDB:Q9SKT0 ProtClustDB:PLN00047
Genevestigator:Q9SKT0 GermOnline:AT2G20890 TIGRFAMs:TIGR03060
Uniprot:Q9SKT0
Length = 300
Score = 836 (299.3 bits), Expect = 1.9e-83, P = 1.9e-83
Identities = 167/245 (68%), Positives = 194/245 (79%)
Query: 30 VSNFEGFRFRTSLFCHCVRFRA----SSSSSRMIIQCMSTAT-DVPPTVAETKMNFLKLY 84
+SNF R S C +F S S+S+ +I CMS T DVPP V+ETK FLK Y
Sbjct: 20 ISNFASSRPLASAIRICTKFSRLSLNSRSTSKSLIHCMSNVTADVPP-VSETKSKFLKAY 78
Query: 85 KRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSEEDREAIFQ 144
KRPIPSIYNTVLQELIVQQHLMRYK+TY+YDPVFALGFVTVYD+LMEGYPS++DR+AIF+
Sbjct: 79 KRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFVTVYDQLMEGYPSDQDRDAIFK 138
Query: 145 AYITALKEDPEQYRIDAQKLEEWARGQTASSLVEFPSKEGEVEGLLKDIAERASGKGNFS 204
AYI AL EDP+QYRIDAQK+EEWAR QT++SLV+F SKEG++E +LKDIA RA K FS
Sbjct: 139 AYIEALNEDPKQYRIDAQKMEEWARSQTSASLVDFSSKEGDIEAVLKDIAGRAGSKEGFS 198
Query: 205 YSRFFAVGLFRLLELANATEPTVLEKLCAVLNVNKRSVDRDLDVYRNXXXXXXXXXXXXX 264
YSRFFAVGLFRLLELA+AT+PTVL+KLCA LN+NK+SVDRDLDVYRN
Sbjct: 199 YSRFFAVGLFRLLELASATDPTVLDKLCASLNINKKSVDRDLDVYRNLLSKLVQAKELLK 258
Query: 265 EYVDR 269
EYV+R
Sbjct: 259 EYVER 263
>UNIPROTKB|P73956 [details] [associations]
symbol:thf1 "Protein thf1" species:1111708 "Synechocystis
sp. PCC 6803 substr. Kazusa" [GO:0030096 "plasma membrane-derived
thylakoid photosystem II" evidence=IDA] InterPro:IPR017499
Pfam:PF11264 GO:GO:0010027 EMBL:BA000022 GenomeReviews:BA000022_GR
GO:GO:0015979 GO:GO:0030096 eggNOG:NOG08111 HOGENOM:HOG000232762
OMA:MHLLSVN TIGRFAMs:TIGR03060 PIR:S75462 RefSeq:NP_441343.1
RefSeq:YP_005651400.1 IntAct:P73956 STRING:P73956 GeneID:12254049
GeneID:954690 KEGG:syn:sll1414 KEGG:syy:SYNGTS_1447 PATRIC:23840060
ProtClustDB:PRK13266 HAMAP:MF_01843 Uniprot:P73956
Length = 240
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 64/188 (34%), Positives = 100/188 (53%)
Query: 72 TVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLME 131
TV++ K F Y RPI SIY ++EL+V+ HL+ + YDP+FALG VT ++ M+
Sbjct: 6 TVSDAKRKFFTHYSRPISSIYRRFVEELLVEMHLLSVNIDFTYDPIFALGIVTSFNSFMQ 65
Query: 132 GYPSEEDREAIFQAYITALKEDPEQYRIDAQKLEEWARGQTASSLVEFP-SKEGEVEGLL 190
GY E AIF A + ++P+Q R DA+ + A + V S++ + LL
Sbjct: 66 GYQPAEQLPAIFNALCHGVDQNPDQVRQDAKNVAASAHHIGLDAWVTAAASEQASGDNLL 125
Query: 191 KDIAERASGKGNFSYSRFFAVGLFRLL-----ELANATEPT--VLEKLCAVLNVNKRSVD 243
+ + F YSR FA+GL+ LL E+ + E L +L +L+++ V
Sbjct: 126 LNTLTGIHQRHKFKYSRLFAIGLYTLLADQDPEVKDNDEKRQDYLTRLSELLDLSLDKVV 185
Query: 244 RDLDVYRN 251
+DLD+YR+
Sbjct: 186 KDLDLYRS 193
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.133 0.379 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 269 256 0.00086 114 3 11 22 0.42 33
32 0.48 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 2
No. of states in DFA: 601 (64 KB)
Total size of DFA: 177 KB (2103 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.85u 0.16s 23.01t Elapsed: 00:00:01
Total cpu time: 22.85u 0.16s 23.01t Elapsed: 00:00:01
Start: Thu May 9 22:10:19 2013 End: Thu May 9 22:10:20 2013