Query 024283
Match_columns 269
No_of_seqs 82 out of 84
Neff 3.9
Searched_HMMs 13730
Date Mon Mar 25 05:34:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024283.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/024283hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1j5ya1 a.4.5.1 (A:3-67) Putat 46.1 4 0.00029 27.1 1.6 26 223-248 20-45 (65)
2 d1u2za_ c.66.1.31 (A:) Catalyt 42.9 17 0.0012 32.2 5.9 77 103-181 76-157 (406)
3 d2dt5a1 a.4.5.38 (A:4-77) Tran 41.9 5.7 0.00042 28.0 2.0 26 224-249 24-49 (74)
4 d1biaa1 a.4.5.1 (A:1-63) Bioti 41.8 6 0.00044 26.2 2.0 24 225-248 19-42 (63)
5 d2zjrk1 d.188.1.1 (K:3-115) Pr 41.2 15 0.0011 27.6 4.4 77 135-212 11-99 (113)
6 d3ci0k2 a.60.16.1 (K:94-203) P 40.9 18 0.0013 26.1 4.8 33 138-170 18-50 (110)
7 d1ku3a_ a.4.13.2 (A:) Sigma70 33.9 13 0.00092 24.8 2.6 32 223-257 26-57 (61)
8 d1m5ya1 a.223.1.2 (A:25-164,A: 31.5 79 0.0058 23.0 7.4 63 97-167 52-114 (173)
9 d1mzba_ a.4.5.42 (A:) Ferric u 31.2 22 0.0016 25.9 3.8 31 131-161 10-42 (134)
10 d1i4aa_ a.65.1.1 (A:) Annexin 31.0 28 0.002 29.3 5.0 79 131-218 2-90 (309)
11 d1axna_ a.65.1.1 (A:) Annexin 29.5 30 0.0022 29.4 5.0 78 132-218 17-104 (323)
12 d1a87a_ f.1.1.1 (A:) Colicin N 29.1 25 0.0018 30.5 4.4 73 155-238 126-202 (297)
13 d1whca_ a.5.2.1 (A:) UBA/UBX 3 27.4 16 0.0012 24.5 2.3 40 223-265 8-47 (64)
14 d1vola1 a.74.1.2 (A:113-207) T 25.4 31 0.0022 23.6 3.6 29 226-254 7-35 (95)
15 d1uu3a_ d.144.1.7 (A:) 3-phosp 24.8 19 0.0013 29.4 2.6 52 116-169 192-245 (288)
16 d1wiva_ a.5.2.1 (A:) Ubiquitin 24.4 24 0.0017 24.2 2.8 36 224-263 29-64 (73)
17 d2p7vb1 a.4.13.2 (B:546-613) S 23.6 11 0.00083 25.6 0.9 32 223-257 23-54 (68)
18 d1khda1 a.46.2.1 (A:12-80) Ant 23.5 89 0.0065 20.1 5.7 54 110-169 13-66 (69)
19 d1cola_ f.1.1.1 (A:) Colicin A 23.4 51 0.0037 26.9 5.1 73 155-238 28-104 (197)
20 d1oqya1 a.5.2.1 (A:160-200) DN 23.4 12 0.00089 23.3 0.9 29 225-254 5-33 (41)
21 d1rdqe_ d.144.1.7 (E:) cAMP-de 23.0 24 0.0017 29.6 3.0 55 116-172 220-276 (350)
22 d1jhfa1 a.4.5.2 (A:2-72) LexA 22.6 52 0.0038 21.8 4.3 30 131-166 21-51 (71)
23 d1aisb1 a.74.1.2 (B:1108-1205) 22.5 28 0.002 24.0 2.9 29 226-254 7-35 (98)
24 d2ev0a2 a.76.1.1 (A:63-136) Ma 21.4 48 0.0035 22.3 3.9 28 139-166 14-41 (74)
25 d2e1oa1 a.4.1.1 (A:8-64) Homeo 21.4 59 0.0043 20.7 4.2 28 216-243 18-45 (57)
26 d1ttya_ a.4.13.2 (A:) Sigma70 21.4 13 0.00098 26.4 0.9 34 222-258 35-68 (87)
27 d1xd7a_ a.4.5.55 (A:) Hypothet 21.3 32 0.0023 24.7 3.1 35 209-244 3-37 (127)
28 d2gqba1 a.282.1.1 (A:1-130) Hy 21.2 1.6E+02 0.012 22.3 7.5 70 183-257 46-118 (130)
29 d2ie7a1 a.65.1.1 (A:2-319) Ann 21.1 45 0.0032 28.0 4.5 25 132-157 11-35 (318)
30 d2cwqa1 a.152.1.4 (A:1-117) Hy 20.7 1.2E+02 0.0088 21.6 6.4 89 71-178 3-93 (117)
31 d1ni7a_ d.224.1.1 (A:) Hypothe 20.4 24 0.0018 27.2 2.3 41 114-154 83-123 (149)
32 d1avca1 a.65.1.1 (A:10-350) An 20.3 48 0.0035 28.3 4.6 92 132-232 10-111 (341)
No 1
>d1j5ya1 a.4.5.1 (A:3-67) Putative transcriptional regulator TM1602, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=46.09 E-value=4 Score=27.12 Aligned_cols=26 Identities=23% Similarity=0.388 Sum_probs=22.0
Q ss_pred CCHHHHHHHHHhcCCChhhhhhhHHH
Q 024283 223 TEPTVLEKLCAVLNVNKRSVDRDLDV 248 (269)
Q Consensus 223 ~d~~~l~~l~~~Lgls~ekv~KDL~l 248 (269)
.++-..++|++.||+|...|.|||+.
T Consensus 20 ~~~vs~~~La~~l~VS~~TI~rdi~~ 45 (65)
T d1j5ya1 20 KEPVSGAQLAEELSVSRQVIVQDIAY 45 (65)
T ss_dssp SSCBCHHHHHHHHTSCHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHCCCHHHHHHHHHH
Confidence 34556889999999999999999965
No 2
>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=42.90 E-value=17 Score=32.24 Aligned_cols=77 Identities=9% Similarity=0.109 Sum_probs=60.3
Q ss_pred HhhhcccccccccccchhhHHHHHHHHhcCCCCchhHHHHHHHHHHhcC-----CCHHHHHHHHHHHHHHHhcCCccccc
Q 024283 103 QHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSEEDREAIFQAYITALK-----EDPEQYRIDAQKLEEWARGQTASSLV 177 (269)
Q Consensus 103 ~HLLs~n~~F~YDplFALG~VTvFd~fm~GY~peed~~~IF~Alc~Alg-----~Dp~qyR~dA~~l~~~A~~~s~~~l~ 177 (269)
-||..-.....|||+.=+ +.+++-.-+.|-|++..+.|-+.+|..+. -|....+.--.+.-++......+++.
T Consensus 76 ~~~~~~~~~~~~~p~~ei--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~~ 153 (406)
T d1u2za_ 76 YKVDFKRSTAIYNPMSEI--GKLIEYSCLVFLPSPYAEQLKETILPDLNASFDNSDTKGFVNAINLYNKMIREIPRQRII 153 (406)
T ss_dssp EECCSSSCCSSSCHHHHH--HHHHHHHHHTTCCTTHHHHHHHHTHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCHHHHH
T ss_pred EEEeccccccccCCHHHH--HHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhhhhhHH
Confidence 466677788899999987 67899999999999999999999888664 67777777777777777766666555
Q ss_pred cccC
Q 024283 178 EFPS 181 (269)
Q Consensus 178 ~~~~ 181 (269)
..+.
T Consensus 154 ~~l~ 157 (406)
T d1u2za_ 154 DHLE 157 (406)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 4444
No 3
>d2dt5a1 a.4.5.38 (A:4-77) Transcriptional repressor Rex, N-terminal domain {Thermus aquaticus [TaxId: 271]}
Probab=41.91 E-value=5.7 Score=28.03 Aligned_cols=26 Identities=27% Similarity=0.351 Sum_probs=21.6
Q ss_pred CHHHHHHHHHhcCCChhhhhhhHHHH
Q 024283 224 EPTVLEKLCAVLNVNKRSVDRDLDVY 249 (269)
Q Consensus 224 d~~~l~~l~~~Lgls~ekv~KDL~lY 249 (269)
+.-.-++|++.+|+++..|.|||..+
T Consensus 24 ~~vSS~~La~~~gi~~~qVRKDls~f 49 (74)
T d2dt5a1 24 HRTSSEQLGGLAQVTAFQVRKDLSYF 49 (74)
T ss_dssp CEECHHHHHHHHTSCHHHHHHHHHHT
T ss_pred eeEcHHHHHHHHCcCHHHHHHHHHHh
Confidence 33456789999999999999999865
No 4
>d1biaa1 a.4.5.1 (A:1-63) Biotin repressor, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=41.79 E-value=6 Score=26.24 Aligned_cols=24 Identities=13% Similarity=0.277 Sum_probs=20.5
Q ss_pred HHHHHHHHHhcCCChhhhhhhHHH
Q 024283 225 PTVLEKLCAVLNVNKRSVDRDLDV 248 (269)
Q Consensus 225 ~~~l~~l~~~Lgls~ekv~KDL~l 248 (269)
.-..++|++.||+|...|.||+.-
T Consensus 19 ~~s~~eLa~~l~vS~~ti~r~i~~ 42 (63)
T d1biaa1 19 FHSGEQLGETLGMSRAAINKHIQT 42 (63)
T ss_dssp CBCHHHHHHHHTSCHHHHHHHHHH
T ss_pred cCCHHHHHHHHCcCHHHHHHHHHH
Confidence 346789999999999999999853
No 5
>d2zjrk1 d.188.1.1 (K:3-115) Prokaryotic ribosomal protein L17 {Deinococcus radiodurans [TaxId: 1299]}
Probab=41.19 E-value=15 Score=27.56 Aligned_cols=77 Identities=21% Similarity=0.255 Sum_probs=59.7
Q ss_pred CchhHHHHHHHHHHhcC---------CCHHHHHHHHHHHHHHHhcCCcc---ccccccCCcchhHHHHHHHHHHhcCCCC
Q 024283 135 SEEDREAIFQAYITALK---------EDPEQYRIDAQKLEEWARGQTAS---SLVEFPSKEGEVEGLLKDIAERASGKGN 202 (269)
Q Consensus 135 peed~~~IF~Alc~Alg---------~Dp~qyR~dA~~l~~~A~~~s~~---~l~~~~~~~g~~~~~l~~Ia~~~~~n~~ 202 (269)
+.+||.+++.-|+.+|= --+.++|.-+++|.-+|+..+.. .+..|+..+..+..++..|+.+-. +-+
T Consensus 11 ~~~hR~allrnl~~sLi~herI~TT~~KAKelr~~~EklIT~AK~~~~~~rr~~~~~l~~k~~v~kLf~~iapry~-~R~ 89 (113)
T d2zjrk1 11 NSSARVALARAQATALLREGRIQTTLTKAKELRPFVEQLITTAKGGDLHSRRLVAQDIHDKDVVRKVMDEVAPKYA-ERP 89 (113)
T ss_dssp CTTHHHHHHHHHHHHHHHSSEEEEEHHHHHHHHHHHHHHHHHHTTCSHHHHHHHTTSCCCHHHHHHHHHTHHHHTT-TSC
T ss_pred ChHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHheecccCChhhhhhhhhhcccHHHHHHHHHHHhHHhc-CCC
Confidence 46799999999998873 34788999999999999987765 445666666668889999998886 455
Q ss_pred CcchhhHHHH
Q 024283 203 FSYSRFFAVG 212 (269)
Q Consensus 203 F~YSRlfAIG 212 (269)
--|+|++=+|
T Consensus 90 GGYTRI~kl~ 99 (113)
T d2zjrk1 90 GGYTRILRVG 99 (113)
T ss_dssp SCCCEEEECC
T ss_pred CCeEEEEECC
Confidence 5799876444
No 6
>d3ci0k2 a.60.16.1 (K:94-203) Pseudopilin GspK {Escherichia coli [TaxId: 562]}
Probab=40.95 E-value=18 Score=26.14 Aligned_cols=33 Identities=18% Similarity=0.065 Sum_probs=29.1
Q ss_pred hHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhc
Q 024283 138 DREAIFQAYITALKEDPEQYRIDAQKLEEWARG 170 (269)
Q Consensus 138 d~~~IF~Alc~Alg~Dp~qyR~dA~~l~~~A~~ 170 (269)
..-..|..|+..+|.|+.+-+.-|..+.+|...
T Consensus 18 ~~~~~f~~Ll~~lgi~~~~a~~la~~l~DWiD~ 50 (110)
T d3ci0k2 18 LAVQQLIALISRLDVPAYRAELIAESLWEFIDE 50 (110)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCc
Confidence 455689999999999999999999999998864
No 7
>d1ku3a_ a.4.13.2 (A:) Sigma70 (SigA, RpoD) {Thermus aquaticus [TaxId: 271]}
Probab=33.89 E-value=13 Score=24.77 Aligned_cols=32 Identities=22% Similarity=0.325 Sum_probs=25.7
Q ss_pred CCHHHHHHHHHhcCCChhhhhhhHHHHHhhHHHHH
Q 024283 223 TEPTVLEKLCAVLNVNKRSVDRDLDVYRNLLSKLL 257 (269)
Q Consensus 223 ~d~~~l~~l~~~Lgls~ekv~KDL~lYrsnLeKma 257 (269)
.+|..++++++.||++.++|.. +.+.-|.||.
T Consensus 26 ~~~~tl~eIa~~lgiS~erVrq---i~~~al~kLR 57 (61)
T d1ku3a_ 26 GREHTLEEVGAYFGVTRERIRQ---IENKALRKLK 57 (61)
T ss_dssp SSCCCHHHHHHHHTCCHHHHHH---HHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCCCHHHHHH---HHHHHHHHHh
Confidence 4567899999999999999985 4666666664
No 8
>d1m5ya1 a.223.1.2 (A:25-164,A:395-427) Porin chaperone SurA, peptide-binding domain {Escherichia coli [TaxId: 562]}
Probab=31.49 E-value=79 Score=22.96 Aligned_cols=63 Identities=8% Similarity=-0.005 Sum_probs=35.3
Q ss_pred HHHHHHHhhhcccccccccccchhhHHHHHHHHhcCCCCchhHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Q 024283 97 QELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSEEDREAIFQAYITALKEDPEQYRIDAQKLEEW 167 (269)
Q Consensus 97 ~ELLVE~HLLs~n~~F~YDplFALG~VTvFd~fm~GY~peed~~~IF~Alc~Alg~Dp~qyR~dA~~l~~~ 167 (269)
++-|+.+..-.++-...-+. +-...+++.+.+... .+. |.+++.+.|+++++||+.-+.-.-|
T Consensus 52 ~~~Ll~q~a~~~~i~vs~~e-----v~~~i~~~~~~~~~~--~~~-f~~~L~~~g~~~~~~~~~ir~~l~~ 114 (173)
T d1m5ya1 52 MDQIILQMGQKMGVKISDEQ-----LDQAIANIAKQNNMT--LDQ-MRSRLAYDGLNYNTYRNQIRKEMII 114 (173)
T ss_dssp HHHHHHHHHHHTTCCCCHHH-----HHHHHHHHHHHTTCC--HHH-HHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccCCHHH-----HHHHHHHHHHHcCCC--HHH-HHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 33333444444444443332 334445555544322 222 8888899999999999886544333
No 9
>d1mzba_ a.4.5.42 (A:) Ferric uptake regulation protein, FUR {Pseudomonas aeruginosa [TaxId: 287]}
Probab=31.24 E-value=22 Score=25.90 Aligned_cols=31 Identities=19% Similarity=0.082 Sum_probs=25.6
Q ss_pred cCCCCchhHHHHHHHHHHhcC--CCHHHHHHHH
Q 024283 131 EGYPSEEDREAIFQAYITALK--EDPEQYRIDA 161 (269)
Q Consensus 131 ~GY~peed~~~IF~Alc~Alg--~Dp~qyR~dA 161 (269)
.||++..+|..|+++|.++-+ ++++++-+..
T Consensus 10 ~GlR~T~qR~~Il~~L~~~~~~h~sa~ei~~~l 42 (134)
T d1mzba_ 10 AGLKVTLPRVKILQMLDSAEQRHMSAEDVYKAL 42 (134)
T ss_dssp TTCCCCHHHHHHHHHHHCC-CCSBCHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHhCCCCCCCHHHHHHHH
Confidence 699999999999999998865 7887776654
No 10
>d1i4aa_ a.65.1.1 (A:) Annexin IV {Cow (Bos taurus) [TaxId: 9913]}
Probab=31.03 E-value=28 Score=29.30 Aligned_cols=79 Identities=14% Similarity=0.205 Sum_probs=44.0
Q ss_pred cCCCCchhHHHHHHHHHHhcCCCHHHHHHH--------HHHHHHHHhcCCccccccccCC--cchhHHHHHHHHHHhcCC
Q 024283 131 EGYPSEEDREAIFQAYITALKEDPEQYRID--------AQKLEEWARGQTASSLVEFPSK--EGEVEGLLKDIAERASGK 200 (269)
Q Consensus 131 ~GY~peed~~~IF~Alc~Alg~Dp~qyR~d--------A~~l~~~A~~~s~~~l~~~~~~--~g~~~~~l~~Ia~~~~~n 200 (269)
.||-|++|-+.|.+| ++..|-|.+.+-+. =+.+...-+.....+|.+.+.+ .|..+..+..+..
T Consensus 2 ~~fd~~~Da~~L~~A-~kg~g~de~~ii~IL~~rs~~qr~~i~~~Y~~~yg~dL~~~L~~e~sG~~~~~l~~l~~----- 75 (309)
T d1i4aa_ 2 SGFNAAEDAQTLRKA-MKGLGTDEDAIINVLAYRSTAQRQEIRTAYKTTIGRDLMDDLKSELSGNFEQVILGMMT----- 75 (309)
T ss_dssp CSCCHHHHHHHHHHH-HSSSSCCHHHHHHHHTTSCHHHHHHHHHHHHHHHSSCHHHHHHHHCCHHHHHHHHHHHS-----
T ss_pred CCCCHHHHHHHHHHH-hhCCCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHCccHHHHHHHHhCchHHHHHHHHhC-----
Confidence 478888888888888 57777666655221 1122222222333334433332 4556666654442
Q ss_pred CCCcchhhHHHHHHHHHh
Q 024283 201 GNFSYSRFFAVGLFRLLE 218 (269)
Q Consensus 201 ~~F~YSRlfAIGLf~LLE 218 (269)
....+.|.-|...|.
T Consensus 76 ---~p~~~dA~~l~~A~k 90 (309)
T d1i4aa_ 76 ---PTVLYDVQELRKAMK 90 (309)
T ss_dssp ---CHHHHHHHHHHHHHS
T ss_pred ---CHHHHHHHHHHHHhc
Confidence 246678888888885
No 11
>d1axna_ a.65.1.1 (A:) Annexin III {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.50 E-value=30 Score=29.36 Aligned_cols=78 Identities=19% Similarity=0.158 Sum_probs=43.6
Q ss_pred CCCCchhHHHHHHHHHHhcCCCHHHHHHH--------HHHHHHHHhcCCccccccccCC--cchhHHHHHHHHHHhcCCC
Q 024283 132 GYPSEEDREAIFQAYITALKEDPEQYRID--------AQKLEEWARGQTASSLVEFPSK--EGEVEGLLKDIAERASGKG 201 (269)
Q Consensus 132 GY~peed~~~IF~Alc~Alg~Dp~qyR~d--------A~~l~~~A~~~s~~~l~~~~~~--~g~~~~~l~~Ia~~~~~n~ 201 (269)
+|-|+.|-+.|.+| ++..|-|.+.+-+. -+++...-+.....+|.+.+.+ .|..+..+.++..
T Consensus 17 ~fd~~~Da~~L~kA-~kg~gtDe~~ii~IL~~rs~~qr~~I~~~Y~~~ygkdL~~~lk~elsG~f~~~l~~l~~------ 89 (323)
T d1axna_ 17 DFSPSVDAEAIQKA-IRGIGTDEKMLISILTERSNAQRQLIVKEYQAAYGKELKDDLKGDLSGHFEHLMVALVT------ 89 (323)
T ss_dssp TCCHHHHHHHHHHH-HSSSSCCHHHHHHHHTTSCHHHHHHHHHHHHHHHSCCHHHHHHHHCCHHHHHHHHHHHS------
T ss_pred CCChHHHHHHHHHH-hhCCCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHCCcHHHHHHHHhCchHHHHHHHHcC------
Confidence 56677777777777 47677676655221 1222222222233344443332 4666666665542
Q ss_pred CCcchhhHHHHHHHHHh
Q 024283 202 NFSYSRFFAVGLFRLLE 218 (269)
Q Consensus 202 ~F~YSRlfAIGLf~LLE 218 (269)
....+.|.-|...|.
T Consensus 90 --~p~~~dA~~l~~A~k 104 (323)
T d1axna_ 90 --PPAVFDAKQLKKSMK 104 (323)
T ss_dssp --CHHHHHHHHHHHHHC
T ss_pred --CHHHHHHHHHHHHHh
Confidence 356778888888884
No 12
>d1a87a_ f.1.1.1 (A:) Colicin N {Escherichia coli [TaxId: 562]}
Probab=29.11 E-value=25 Score=30.52 Aligned_cols=73 Identities=11% Similarity=0.180 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHHh---cCCccccccccCCcchhHHHHHHHHHHhcCCCCCcchhhHHHHHHHHHhhcCCCC-HHHHHH
Q 024283 155 EQYRIDAQKLEEWAR---GQTASSLVEFPSKEGEVEGLLKDIAERASGKGNFSYSRFFAVGLFRLLELANATE-PTVLEK 230 (269)
Q Consensus 155 ~qyR~dA~~l~~~A~---~~s~~~l~~~~~~~g~~~~~l~~Ia~~~~~n~~F~YSRlfAIGLf~LLE~~~~~d-~~~l~~ 230 (269)
++|.+-|++|.+-++ |+...+. +..|+.+ ++...|++.+++.=-=-.|...||..+.++ .+.|.+
T Consensus 126 ~Kyk~lA~eLA~~aKnfqGKkIRsv----------deALks~-eK~~~n~nkKinakDR~AI~nALksid~~~mAkNL~k 194 (297)
T d1a87a_ 126 VKYKNVAKEVANDIKNFHGRNIRSY----------NEAMASL-NKVLANPKMKVNKSDKDAIVNAWKQVNAKDMANKIGN 194 (297)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCCH----------HHHHHHH-HHHHTCTTCCCCHHHHHHHHHHHHTCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhhccCCccCCH----------HHHHHHH-HHHhhCccccccccCHHHHHHHHHhcCHHHHHHHHHH
Confidence 578889999999998 6665433 3455555 345569999999776677788888776655 356788
Q ss_pred HHHhcCCC
Q 024283 231 LCAVLNVN 238 (269)
Q Consensus 231 l~~~Lgls 238 (269)
++..+|+-
T Consensus 195 fsK~Fk~~ 202 (297)
T d1a87a_ 195 LGKAFKVA 202 (297)
T ss_dssp TCGGGCCT
T ss_pred HHhhcCcc
Confidence 88888875
No 13
>d1whca_ a.5.2.1 (A:) UBA/UBX 33.3 kDa protein {Mouse (Mus musculus) [TaxId: 10090]}
Probab=27.39 E-value=16 Score=24.51 Aligned_cols=40 Identities=25% Similarity=0.324 Sum_probs=29.3
Q ss_pred CCHHHHHHHHHhcCCChhhhhhhHHHHHhhHHHHHHHHHHHHH
Q 024283 223 TEPTVLEKLCAVLNVNKRSVDRDLDVYRNLLSKLLQAKELLKE 265 (269)
Q Consensus 223 ~d~~~l~~l~~~Lgls~ekv~KDL~lYrsnLeKmaQA~elmeE 265 (269)
.|++.|.+|++ |||+++.++|=|-.-.+ .-+++|.+-|-+
T Consensus 8 ~d~~~l~~L~~-MGF~~~~a~~AL~~t~n--~~~e~A~~Wl~~ 47 (64)
T d1whca_ 8 AELTALESLIE-MGFPRGRAEKALALTGN--QGIEAAMDWLME 47 (64)
T ss_dssp CCCCHHHHHHT-TTCCHHHHHHHHHHHTS--CCHHHHHHHHHH
T ss_pred cCHHHHHHHHH-cCCCHHHHHHHHHHhCC--CCHHHHHHHHHH
Confidence 47889999985 99999999998854433 125567776544
No 14
>d1vola1 a.74.1.2 (A:113-207) Transcription factor IIB (TFIIB), core domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.36 E-value=31 Score=23.59 Aligned_cols=29 Identities=17% Similarity=0.414 Sum_probs=24.9
Q ss_pred HHHHHHHHhcCCChhhhhhhHHHHHhhHH
Q 024283 226 TVLEKLCAVLNVNKRSVDRDLDVYRNLLS 254 (269)
Q Consensus 226 ~~l~~l~~~Lgls~ekv~KDL~lYrsnLe 254 (269)
..++.+|+.||||+.-.+.=..+|+...+
T Consensus 7 ~~I~~~~~~L~L~~~i~~~A~~i~~~~~~ 35 (95)
T d1vola1 7 KEITTMADRINLPRNKVDRTNNLFRQAYE 35 (95)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCcCHHHHHHHHHHHHHHHH
Confidence 46899999999999999988888887654
No 15
>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.83 E-value=19 Score=29.40 Aligned_cols=52 Identities=29% Similarity=0.411 Sum_probs=33.4
Q ss_pred ccchhhHHHHHHHHhcCCCC--chhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHh
Q 024283 116 PVFALGFVTVYDRLMEGYPS--EEDREAIFQAYITALKEDPEQYRIDAQKLEEWAR 169 (269)
Q Consensus 116 plFALG~VTvFd~fm~GY~p--eed~~~IF~Alc~Alg~Dp~qyR~dA~~l~~~A~ 169 (269)
.|||||+ +.|+-++ |.+| .++...+++.+++.--.-|+.+-.+++.|....-
T Consensus 192 DiwSlGv-ilyell~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L 245 (288)
T d1uu3a_ 192 DLWALGC-IIYQLVA-GLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLL 245 (288)
T ss_dssp HHHHHHH-HHHHHHH-SSCSSCCSSHHHHHHHHHTTCCCCCTTCCHHHHHHHHTTS
T ss_pred ceehhhH-HHHHHhh-CCCCCCCcCHHHHHHHHHcCCCCCCccCCHHHHHHHHHHc
Confidence 4999995 5677666 6665 3456778888877543335556666666666433
No 16
>d1wiva_ a.5.2.1 (A:) Ubiquitin isopeptidase T {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=24.37 E-value=24 Score=24.19 Aligned_cols=36 Identities=8% Similarity=0.228 Sum_probs=28.6
Q ss_pred CHHHHHHHHHhcCCChhhhhhhHHHHHhhHHHHHHHHHHH
Q 024283 224 EPTVLEKLCAVLNVNKRSVDRDLDVYRNLLSKLLQAKELL 263 (269)
Q Consensus 224 d~~~l~~l~~~Lgls~ekv~KDL~lYrsnLeKmaQA~elm 263 (269)
+++.+.+|.+ |||+.+.+.+=|-.-.+|++ +|.+.+
T Consensus 29 d~~~i~~L~~-MGF~~~~a~~AL~~~~~n~e---~Av~~L 64 (73)
T d1wiva_ 29 DQSSVDTLLS-FGFAEDVARKALKASGGDIE---KATDWV 64 (73)
T ss_dssp CHHHHHHHHH-HTCCHHHHHHHHHHTTSCHH---HHHHHH
T ss_pred CHHHHHHHHh-cCCCHHHHHHHHHHcCCCHH---HHHHHH
Confidence 5678999985 99999999999988877755 455544
No 17
>d2p7vb1 a.4.13.2 (B:546-613) Sigma70 (SigA, RpoD) {Escherichia coli [TaxId: 562]}
Probab=23.64 E-value=11 Score=25.63 Aligned_cols=32 Identities=19% Similarity=0.293 Sum_probs=25.6
Q ss_pred CCHHHHHHHHHhcCCChhhhhhhHHHHHhhHHHHH
Q 024283 223 TEPTVLEKLCAVLNVNKRSVDRDLDVYRNLLSKLL 257 (269)
Q Consensus 223 ~d~~~l~~l~~~Lgls~ekv~KDL~lYrsnLeKma 257 (269)
.+|..+++|++.+|+|.++|.. +.+.-|.||.
T Consensus 23 ~~~~tl~eI~~~lgiSrerVrq---ie~~al~kLr 54 (68)
T d2p7vb1 23 NTDYTLEEVGKQFDVTRERIRQ---IEAKALRKLR 54 (68)
T ss_dssp SSCCCHHHHHHHHTCCHHHHHH---HHHHHHHGGG
T ss_pred CCcCCHHHHHHHHCCCHHHHHH---HHHHHHHHHH
Confidence 3567899999999999999985 4566677765
No 18
>d1khda1 a.46.2.1 (A:12-80) Anthranilate phosphoribosyltransferase (TrpD) {Pectobacterium carotovorum [TaxId: 554]}
Probab=23.48 E-value=89 Score=20.10 Aligned_cols=54 Identities=15% Similarity=0.159 Sum_probs=40.3
Q ss_pred ccccccccchhhHHHHHHHHhcCCCCchhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHh
Q 024283 110 RTYQYDPVFALGFVTVYDRLMEGYPSEEDREAIFQAYITALKEDPEQYRIDAQKLEEWAR 169 (269)
Q Consensus 110 ~~F~YDplFALG~VTvFd~fm~GY~peed~~~IF~Alc~Alg~Dp~qyR~dA~~l~~~A~ 169 (269)
.+-.|+.+ ..+|+.+|.|--|+.+..++.-|+ ..-|+.++.+-.-++.+.+.++
T Consensus 13 ~~Ls~ee~-----~~~~~~i~~g~~~d~qiaafL~al-~~kg~t~dEi~g~~~am~~~~~ 66 (69)
T d1khda1 13 QSMTQEES-----HQLFAAIVRGELEDSQLAAALISM-KMRGERPEEIAGAASALLADAQ 66 (69)
T ss_dssp CCCCHHHH-----HHHHHHHTTTCSCHHHHHHHHHHH-HHHCCCHHHHHHHHHHHHHTSC
T ss_pred CCCCHHHH-----HHHHHHHHcCCCCHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHhCC
Confidence 44455543 468999999998888888877765 4568899998888888877443
No 19
>d1cola_ f.1.1.1 (A:) Colicin A {Escherichia coli [TaxId: 562]}
Probab=23.40 E-value=51 Score=26.93 Aligned_cols=73 Identities=14% Similarity=0.250 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHHHh---cCCccccccccCCcchhHHHHHHHHHHhcCCCCCcchhhHHHHHHHHHhhcCCCC-HHHHHH
Q 024283 155 EQYRIDAQKLEEWAR---GQTASSLVEFPSKEGEVEGLLKDIAERASGKGNFSYSRFFAVGLFRLLELANATE-PTVLEK 230 (269)
Q Consensus 155 ~qyR~dA~~l~~~A~---~~s~~~l~~~~~~~g~~~~~l~~Ia~~~~~n~~F~YSRlfAIGLf~LLE~~~~~d-~~~l~~ 230 (269)
+||.+-|++|.+-++ |++..... ..++.. ++...|++-+.|.=-=-.|+.-||..+.++ .+.|.+
T Consensus 28 ~Ky~~lA~elA~~~K~fqGK~IRs~~----------dAl~s~-eK~~~~lnkK~s~~Dr~AI~nAl~sid~~~ma~nl~~ 96 (197)
T d1cola_ 28 DKYKAIAKDIADNIKNFQGKTIRSFD----------DAMASL-NKITANPAMKINKADRDALVNAWKHVDAQDMANKLGN 96 (197)
T ss_dssp HHHHHHHHHHHHHHHTCTTCCCCCHH----------HHHHHH-HHHHTSGGGCCCHHHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhccCCccCCHH----------HHHHHH-HHHHhchhhhccHhhHHHHHHHHHhcCHHHHHHHHHH
Confidence 688999999999998 88765333 344444 244558888888777777788888776655 457888
Q ss_pred HHHhcCCC
Q 024283 231 LCAVLNVN 238 (269)
Q Consensus 231 l~~~Lgls 238 (269)
++..+|+-
T Consensus 97 ~sK~f~~~ 104 (197)
T d1cola_ 97 LSKAFKVA 104 (197)
T ss_dssp HCGGGCCT
T ss_pred HHhhccch
Confidence 88888865
No 20
>d1oqya1 a.5.2.1 (A:160-200) DNA repair protein Hhr23a {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.39 E-value=12 Score=23.25 Aligned_cols=29 Identities=17% Similarity=0.181 Sum_probs=22.6
Q ss_pred HHHHHHHHHhcCCChhhhhhhHHHHHhhHH
Q 024283 225 PTVLEKLCAVLNVNKRSVDRDLDVYRNLLS 254 (269)
Q Consensus 225 ~~~l~~l~~~Lgls~ekv~KDL~lYrsnLe 254 (269)
.+.+++|.+ |||+.+.+.+=|.-..+|+|
T Consensus 5 e~~i~~L~~-MGF~~~~a~~AL~~~~~N~e 33 (41)
T d1oqya1 5 ETMLTEIMS-MGYERERVVAALRASYNNPH 33 (41)
T ss_dssp HHHHHHHHT-TTCCSHHHHHHHHHSCSSTT
T ss_pred HHHHHHHHH-cCCCHHHHHHHHHHhCCCHH
Confidence 456777766 89999999998877766654
No 21
>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.02 E-value=24 Score=29.57 Aligned_cols=55 Identities=20% Similarity=0.370 Sum_probs=38.2
Q ss_pred ccchhhHHHHHHHHhcCCCC--chhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCC
Q 024283 116 PVFALGFVTVYDRLMEGYPS--EEDREAIFQAYITALKEDPEQYRIDAQKLEEWARGQT 172 (269)
Q Consensus 116 plFALG~VTvFd~fm~GY~p--eed~~~IF~Alc~Alg~Dp~qyR~dA~~l~~~A~~~s 172 (269)
.|||||+ +.|+.++ |.+| ..+...++..+++..-..|..+-.++..+....-...
T Consensus 220 DiwSlGv-ilyemlt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~d 276 (350)
T d1rdqe_ 220 DWWALGV-LIYEMAA-GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 276 (350)
T ss_dssp HHHHHHH-HHHHHHH-SSCSSCCSSHHHHHHHHHHCCCCCCTTCCHHHHHHHHHHSCSC
T ss_pred cccchhH-HHHHHHh-CCCCCCCcCHHHHHHHHhcCCCCCCccCCHHHHHHHHHHhhhC
Confidence 4999997 4666665 6666 3456778888888776667777777777777554443
No 22
>d1jhfa1 a.4.5.2 (A:2-72) LexA repressor, N-terminal DNA-binding domain {Escherichia coli [TaxId: 562]}
Probab=22.63 E-value=52 Score=21.83 Aligned_cols=30 Identities=17% Similarity=0.187 Sum_probs=25.5
Q ss_pred cCCCCchhHHHHHHHHHHhcCC-CHHHHHHHHHHHHH
Q 024283 131 EGYPSEEDREAIFQAYITALKE-DPEQYRIDAQKLEE 166 (269)
Q Consensus 131 ~GY~peed~~~IF~Alc~Alg~-Dp~qyR~dA~~l~~ 166 (269)
.||||. +.-+|+++|+ .|...+..-++|++
T Consensus 21 ~G~~Ps------~rei~~~~g~~S~stv~~~l~~Le~ 51 (71)
T d1jhfa1 21 TGMPPT------RAEIAQRLGFRSPNAAEEHLKALAR 51 (71)
T ss_dssp HSSCCC------HHHHHHHTTCSSHHHHHHHHHHHHH
T ss_pred hCCCCC------HHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 399997 5668999999 69999999888887
No 23
>d1aisb1 a.74.1.2 (B:1108-1205) Transcription factor IIB (TFIIB), core domain {Archaeon Pyrococcus woesei [TaxId: 2262]}
Probab=22.47 E-value=28 Score=23.98 Aligned_cols=29 Identities=17% Similarity=0.406 Sum_probs=24.2
Q ss_pred HHHHHHHHhcCCChhhhhhhHHHHHhhHH
Q 024283 226 TVLEKLCAVLNVNKRSVDRDLDVYRNLLS 254 (269)
Q Consensus 226 ~~l~~l~~~Lgls~ekv~KDL~lYrsnLe 254 (269)
..++++|+.||||.+-++.=..+|+...+
T Consensus 7 ~~I~~~~~~L~L~~~i~~~A~~i~k~~~~ 35 (98)
T d1aisb1 7 SELDRITAQLKLPRHVEEEAARLYREAVR 35 (98)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCcCHHHHHHHHHHHHHHHH
Confidence 35899999999999988888888876554
No 24
>d2ev0a2 a.76.1.1 (A:63-136) Manganese transport regulator MntR {Bacillus subtilis [TaxId: 1423]}
Probab=21.45 E-value=48 Score=22.27 Aligned_cols=28 Identities=18% Similarity=0.409 Sum_probs=24.3
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHH
Q 024283 139 REAIFQAYITALKEDPEQYRIDAQKLEE 166 (269)
Q Consensus 139 ~~~IF~Alc~Alg~Dp~qyR~dA~~l~~ 166 (269)
|-.|..-+...+|.|++....+|.+++-
T Consensus 14 rHrlle~fL~~lg~~~~~a~~~A~~iEH 41 (74)
T d2ev0a2 14 RHELLEQFLRIIGVDEEKIYNDVEGIEH 41 (74)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHcCCChhHHHHHHHHHHh
Confidence 4567788889999999999999999876
No 25
>d2e1oa1 a.4.1.1 (A:8-64) Homeobox protein prh {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.41 E-value=59 Score=20.69 Aligned_cols=28 Identities=21% Similarity=0.360 Sum_probs=21.8
Q ss_pred HHhhcCCCCHHHHHHHHHhcCCChhhhh
Q 024283 216 LLELANATEPTVLEKLCAVLNVNKRSVD 243 (269)
Q Consensus 216 LLE~~~~~d~~~l~~l~~~Lgls~ekv~ 243 (269)
..+...-.+.+..+.||+.|||+...|+
T Consensus 18 ~F~~n~yp~~~~r~~LA~~l~L~~~qV~ 45 (57)
T d2e1oa1 18 KFETQKYLSPPERKRLAKMLQLSERQVK 45 (57)
T ss_dssp HHHHCSSCCHHHHHHHHHHTTCCHHHHH
T ss_pred HHHhCCCCCHHHHHHHHHHhCCCHHHhh
Confidence 3344444678899999999999988764
No 26
>d1ttya_ a.4.13.2 (A:) Sigma70 (SigA, RpoD) {Thermotoga maritima [TaxId: 2336]}
Probab=21.36 E-value=13 Score=26.40 Aligned_cols=34 Identities=24% Similarity=0.390 Sum_probs=27.9
Q ss_pred CCCHHHHHHHHHhcCCChhhhhhhHHHHHhhHHHHHH
Q 024283 222 ATEPTVLEKLCAVLNVNKRSVDRDLDVYRNLLSKLLQ 258 (269)
Q Consensus 222 ~~d~~~l~~l~~~Lgls~ekv~KDL~lYrsnLeKmaQ 258 (269)
..+|..+++|++.||+|.++|.. +.+.-|.||.+
T Consensus 35 ~~~~~tl~eI~~~lgiSrERVRQ---ie~~al~kLr~ 68 (87)
T d1ttya_ 35 DGKPKTLEEVGQYFNVTRERIRQ---IEVKALRKLRH 68 (87)
T ss_dssp TSSCCCHHHHHHHHTCCHHHHHH---HHHHHHHHHBT
T ss_pred CCCcCCHHHHHHHhCCCHHHHHH---HHHHHHHHHhC
Confidence 34678999999999999999985 56777888754
No 27
>d1xd7a_ a.4.5.55 (A:) Hypothetical protein ywnA {Bacillus subtilis [TaxId: 1423]}
Probab=21.34 E-value=32 Score=24.74 Aligned_cols=35 Identities=29% Similarity=0.277 Sum_probs=24.8
Q ss_pred HHHHHHHHHhhcCCCCHHHHHHHHHhcCCChhhhhh
Q 024283 209 FAVGLFRLLELANATEPTVLEKLCAVLNVNKRSVDR 244 (269)
Q Consensus 209 fAIGLf~LLE~~~~~d~~~l~~l~~~Lgls~ekv~K 244 (269)
|+|++..|+-++. .++-..+.|++.+|+|+.-|.|
T Consensus 3 f~~Av~~L~~la~-~~~~ss~~IA~~~~~~~~~v~k 37 (127)
T d1xd7a_ 3 LAVAIHILSLISM-DEKTSSEIIADSVNTNPVVVRR 37 (127)
T ss_dssp HHHHHHHHHHHHT-CSCCCHHHHHHHHTSCHHHHHH
T ss_pred HHHHHHHHHHHhc-CCCCCHHHHHHHhCcCHHHHHH
Confidence 4666766665554 2344678999999999987765
No 28
>d2gqba1 a.282.1.1 (A:1-130) Hypothetical protein RPA2825 {Rhodopseudomonas palustris [TaxId: 1076]}
Probab=21.24 E-value=1.6e+02 Score=22.32 Aligned_cols=70 Identities=19% Similarity=0.265 Sum_probs=50.3
Q ss_pred cchhHHHHHHHHHHhcCCCCCcchhhHHHHHHHHHhhcCCCCHHHHHHHHHhcCCCh---hhhhhhHHHHHhhHHHHH
Q 024283 183 EGEVEGLLKDIAERASGKGNFSYSRFFAVGLFRLLELANATEPTVLEKLCAVLNVNK---RSVDRDLDVYRNLLSKLL 257 (269)
Q Consensus 183 ~g~~~~~l~~Ia~~~~~n~~F~YSRlfAIGLf~LLE~~~~~d~~~l~~l~~~Lgls~---ekv~KDL~lYrsnLeKma 257 (269)
.-++..+|..+++..++.-+|.-| -|-|+.||.+ ...-+.=++|+..||++. +.....+-|-|-.+.|++
T Consensus 46 ~VDV~aiLd~~a~~~gqkLnWRtS---IVDLmKlLgL--DSSL~aRKeLA~EL~y~gd~~dSA~mNiwLhk~vm~kLa 118 (130)
T d2gqba1 46 SIDVAPILDKAVKAKGEKLEWRTS---IVDLMKALDI--DSSLSARKELAKELGYSGDMNDSASMNIWLHKQVMSKLV 118 (130)
T ss_dssp SEECHHHHHHHHHHHSSCCCTTTC---HHHHHHHTCC--CCSHHHHHHHHHHHTCCCSSCHHHHHHHHHHHHHHHHHG
T ss_pred cccHHHHHHHHHHhcCCCCccHHH---HHHHHHHhcC--cccHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHH
Confidence 347889999999877666677655 4556666622 234678899999999984 456677777887777775
No 29
>d2ie7a1 a.65.1.1 (A:2-319) Annexin V {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=21.08 E-value=45 Score=28.03 Aligned_cols=25 Identities=24% Similarity=0.473 Sum_probs=16.4
Q ss_pred CCCCchhHHHHHHHHHHhcCCCHHHH
Q 024283 132 GYPSEEDREAIFQAYITALKEDPEQY 157 (269)
Q Consensus 132 GY~peed~~~IF~Alc~Alg~Dp~qy 157 (269)
||-|+.|-+.|.+| |+..|-|.+.+
T Consensus 11 ~fd~~~Da~~L~~A-~kg~g~de~~i 35 (318)
T d2ie7a1 11 GFDGRADAEVLRKA-MKGLGTDEDSI 35 (318)
T ss_dssp TCCHHHHHHHHHHH-HSSSSCCHHHH
T ss_pred CCChHHHHHHHHHH-hcCCCCCHHHH
Confidence 56667777777777 56666666554
No 30
>d2cwqa1 a.152.1.4 (A:1-117) Hypothetical protein TTHA0727 {Thermus thermophilus [TaxId: 274]}
Probab=20.74 E-value=1.2e+02 Score=21.61 Aligned_cols=89 Identities=16% Similarity=0.160 Sum_probs=62.7
Q ss_pred CchhHhHHHHHhhCCCcCCcchhHHHHHHHHHHhhhcccccccccccchhhHHHHHHHHh--cCCCCchhHHHHHHHHHH
Q 024283 71 PTVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLM--EGYPSEEDREAIFQAYIT 148 (269)
Q Consensus 71 ~TVSDTKr~F~~~y~rPI~sIYrrvv~ELLVE~HLLs~n~~F~YDplFALG~VTvFd~fm--~GY~peed~~~IF~Alc~ 148 (269)
+|.-+-.+..-+.+...||.++..+.+ .+|=+.-.+...|+..| +|-=+..+|+.|.=|.-.
T Consensus 3 ~~~e~~l~~~~~~~G~~~P~~~~~mae----------------~~P~~l~~~~~~~~~~~~~~g~Ld~k~reLI~la~s~ 66 (117)
T d2cwqa1 3 RTHERVLQAMAENLGEGLPRAIPLLAE----------------KAPGLLLEHGRSWTYAMPEKGALDEKTRTLILLGIAL 66 (117)
T ss_dssp SSSHHHHHHHHHHHGGGCCTHHHHHHH----------------HCHHHHHHHHHHHHHHSCTTCSSCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhhhccHHHHHHHH----------------hChHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 355566677777777888877777766 45766556666666665 566788999999999888
Q ss_pred hcCCCHHHHHHHHHHHHHHHhcCCcccccc
Q 024283 149 ALKEDPEQYRIDAQKLEEWARGQTASSLVE 178 (269)
Q Consensus 149 Alg~Dp~qyR~dA~~l~~~A~~~s~~~l~~ 178 (269)
++|-+ ..++.-.+...+ .|.|.++|.+
T Consensus 67 a~gc~-~c~~~h~~~A~~--~G~t~eEI~E 93 (117)
T d2cwqa1 67 ATGSE-ACVKAMAHRAKR--LGLSKEALLE 93 (117)
T ss_dssp HHTCH-HHHHHHHHHHHH--HTCCHHHHHH
T ss_pred HcCCh-HHHHHHHHHHHH--cCCCHHHHHH
Confidence 88864 466666655544 6777777764
No 31
>d1ni7a_ d.224.1.1 (A:) Hypothetical protein YgdK {Escherichia coli [TaxId: 562]}
Probab=20.37 E-value=24 Score=27.18 Aligned_cols=41 Identities=17% Similarity=0.109 Sum_probs=28.5
Q ss_pred ccccchhhHHHHHHHHhcCCCCchhHHHHHHHHHHhcCCCH
Q 024283 114 YDPVFALGFVTVYDRLMEGYPSEEDREAIFQAYITALKEDP 154 (269)
Q Consensus 114 YDplFALG~VTvFd~fm~GY~peed~~~IF~Alc~Alg~Dp 154 (269)
-|..-.=|++.+.-....|.+|++-...=...+++.+|++.
T Consensus 83 SDa~IvkGl~~iL~~~~sg~t~~eI~~~~~~~~~~~lGL~~ 123 (149)
T d1ni7a_ 83 SEGRIVRGLLAVLLTAVEGKTAAELQAQSPLALFDELGLRA 123 (149)
T ss_dssp ESSHHHHHHHHHHHHHTTTCCHHHHHHSCTHHHHHHHTSSS
T ss_pred ccHHHHHHHHHHHHHHHCCCCHHHHHhcCHHHHHHHCCChh
Confidence 46667779999999999999987544321445566666543
No 32
>d1avca1 a.65.1.1 (A:10-350) Annexin VI {Cow (Bos taurus) [TaxId: 9913]}
Probab=20.32 E-value=48 Score=28.27 Aligned_cols=92 Identities=15% Similarity=0.189 Sum_probs=0.0
Q ss_pred CCCCchhHHHHHHHHHHhcCCCHHHH--------HHHHHHHHHHHhcCCccccccccCC--cchhHHHHHHHHHHhcCCC
Q 024283 132 GYPSEEDREAIFQAYITALKEDPEQY--------RIDAQKLEEWARGQTASSLVEFPSK--EGEVEGLLKDIAERASGKG 201 (269)
Q Consensus 132 GY~peed~~~IF~Alc~Alg~Dp~qy--------R~dA~~l~~~A~~~s~~~l~~~~~~--~g~~~~~l~~Ia~~~~~n~ 201 (269)
||-|+.|-+.|.+| |+..|-|.+.+ ...=+.+...-+.....+|.+-+.+ .|..+..+..+..
T Consensus 10 ~fd~~~Da~~L~~A-~kg~gtDe~~li~IL~~rs~~qr~~i~~~Y~~~ygkdL~~~Lk~elsG~f~~~l~~l~~------ 82 (341)
T d1avca1 10 DFNPSQDAETLYNA-MKGFGSDKEAIINLITSRSNKQRQEICQNYKSLYGKDLIADLKYELTGKFERLIVGLMR------ 82 (341)
T ss_dssp SCCHHHHHHHHHHH-TCSSSCCHHHHHHHHTTSCHHHHHHHHHHHHHHHSSCHHHHHHHHCCSHHHHHHHHHHS------
T ss_pred CCChHHHHHHHHHH-hhCCCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHCccHHHHHHHHcCchHHHHHHHHhc------
Q ss_pred CCcchhhHHHHHHHHHhhcCCCCHHHHHHHH
Q 024283 202 NFSYSRFFAVGLFRLLELANATEPTVLEKLC 232 (269)
Q Consensus 202 ~F~YSRlfAIGLf~LLE~~~~~d~~~l~~l~ 232 (269)
...-+.|.-|...|.-.|..+...++-||
T Consensus 83 --~p~~~dA~~l~~A~kG~gtde~~LieIL~ 111 (341)
T d1avca1 83 --PPAYADAKEIKDAISGIGTDEKCLIEILA 111 (341)
T ss_dssp --CHHHHHHHHHHHHHSSSSCCHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHHhCCCcchhhhhhhhh
Done!