Query 024284
Match_columns 269
No_of_seqs 156 out of 438
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 05:35:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024284.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024284hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2r8u_A Microtubule-associated 100.0 7.4E-89 2.5E-93 623.6 12.2 242 1-245 1-252 (268)
2 4abo_I MAL3, microtubule integ 100.0 6.1E-60 2.1E-64 398.6 10.2 119 13-135 5-123 (145)
3 1wyo_A Protein EB3, microtubul 100.0 2.2E-58 7.7E-63 394.8 14.6 132 1-135 8-140 (159)
4 2qjx_A Protein BIM1; calponin 100.0 4.9E-57 1.7E-61 374.2 10.2 122 8-133 4-125 (127)
5 2qjz_A Microtubule-associated 100.0 1.6E-56 5.6E-61 369.2 11.1 122 10-134 1-122 (123)
6 3tq7_B Microtubule-associated 99.9 9.8E-26 3.3E-30 174.1 5.2 61 185-245 2-62 (82)
7 4e61_A Protein BIM1; EB1-like 99.9 7.9E-24 2.7E-28 170.1 4.0 64 182-245 16-102 (106)
8 3mtu_A Tropomyosin alpha-1 cha 99.9 4.8E-22 1.6E-26 151.0 6.9 61 185-245 10-70 (75)
9 1wjo_A T-plastin; CH domain, a 98.8 2.2E-08 7.7E-13 82.3 8.3 100 12-111 5-111 (124)
10 2d89_A EHBP1 protein; all alph 98.6 7.4E-08 2.5E-12 77.9 7.8 101 10-116 5-111 (119)
11 2d87_A Smoothelin splice isofo 98.6 9.5E-08 3.3E-12 78.4 7.7 96 14-115 7-109 (128)
12 1bkr_A Spectrin beta chain; fi 98.5 1.7E-07 5.7E-12 74.8 6.1 94 15-115 4-104 (109)
13 1wyq_A Spectrin beta chain, br 98.5 2.1E-07 7.3E-12 76.2 6.4 97 14-116 7-112 (127)
14 1wyl_A NEDD9 interacting prote 98.4 5.8E-07 2E-11 72.4 6.9 94 14-114 7-109 (116)
15 1bhd_A Utrophin; calponin homo 98.4 2.2E-07 7.4E-12 75.2 4.2 95 14-115 8-109 (118)
16 2yrn_A Neuron navigator 2 isof 98.3 1E-06 3.5E-11 71.6 6.5 99 16-116 20-125 (129)
17 1h67_A Calponin alpha; cytoske 98.3 9E-07 3.1E-11 70.2 5.3 81 16-99 5-89 (108)
18 2d88_A Protein mical-3; all al 98.2 3.7E-06 1.3E-10 68.1 7.6 94 14-114 9-113 (121)
19 1sh5_A Plectin 1, PLTN, PCN; a 98.2 1.7E-06 5.8E-11 76.8 5.8 96 16-117 135-239 (245)
20 3i6x_A P195, RAS GTPase-activa 98.2 2.2E-06 7.6E-11 74.9 6.0 100 14-113 47-160 (193)
21 1ujo_A Transgelin; CH domain, 98.1 5.2E-06 1.8E-10 69.2 7.7 99 16-116 11-123 (144)
22 1wyr_A RHO guanine nucleotide 98.1 3.7E-06 1.3E-10 68.2 6.3 82 15-99 7-98 (121)
23 2ee7_A Sperm flagellar protein 98.1 1E-05 3.5E-10 66.7 8.8 113 2-116 3-120 (127)
24 1p2x_A RNG2 protein, RAS GTPas 98.1 5.2E-06 1.8E-10 70.2 7.0 85 13-99 10-100 (159)
25 2l3g_A RHO guanine nucleotide 98.1 7.3E-06 2.5E-10 67.1 6.9 81 16-99 14-105 (126)
26 1wku_A Alpha-actinin 3; calpon 98.1 1E-05 3.6E-10 72.5 8.4 96 15-116 141-246 (254)
27 1p5s_A RAS GTPase-activating-l 98.0 5.4E-06 1.8E-10 72.9 6.2 83 15-99 56-144 (203)
28 1wyn_A Calponin-2; CH domain, 98.0 7.8E-06 2.7E-10 68.3 6.9 87 10-99 12-103 (146)
29 1wyp_A Calponin 1; CH domain, 98.0 9.2E-06 3.1E-10 67.1 6.8 81 16-99 19-103 (136)
30 1dxx_A Dystrophin; structural 98.0 3.4E-06 1.2E-10 75.1 4.4 96 15-114 136-239 (246)
31 1wym_A Transgelin-2; CH domain 98.0 1.1E-05 3.6E-10 68.1 6.8 81 16-99 19-112 (155)
32 1aoa_A T-fimbrin; actin-bindin 98.0 1.1E-05 3.7E-10 72.9 6.6 95 16-110 170-273 (275)
33 2vzc_A Alpha-parvin; membrane, 97.9 2.6E-05 8.9E-10 63.9 7.8 92 16-107 24-120 (131)
34 2wa7_A Filamin-B; disease muta 97.9 3.1E-05 1.1E-09 68.9 8.3 94 15-115 144-242 (245)
35 1pxy_A Fimbrin-like protein; c 97.9 2.1E-05 7.2E-10 76.7 7.4 100 13-113 396-502 (506)
36 1rt8_A Fimbrin; filamentous ac 97.8 2.6E-05 8.9E-10 76.2 7.4 92 13-105 407-505 (513)
37 2rr8_A Iqgap1 protein; F-actin 97.8 1.5E-05 5E-10 69.3 4.9 101 15-115 26-140 (190)
38 1pxy_A Fimbrin-like protein; c 97.7 2.3E-05 7.8E-10 76.4 5.3 95 15-114 153-253 (506)
39 3f7p_A Plectin-1; plakin, hemi 97.6 4E-05 1.4E-09 70.8 4.8 96 14-115 188-290 (296)
40 1aoa_A T-fimbrin; actin-bindin 97.6 0.00012 3.9E-09 66.1 7.7 92 16-107 26-131 (275)
41 1rt8_A Fimbrin; filamentous ac 97.6 4.8E-05 1.6E-09 74.3 5.3 94 16-114 163-262 (513)
42 3hoc_A Filamin-A; calponin hom 97.6 7.5E-05 2.5E-09 68.1 6.1 95 14-115 170-269 (272)
43 4b7l_A Filamin-B; structural p 97.5 0.00022 7.5E-09 66.8 8.3 115 13-133 139-259 (347)
44 2wa7_A Filamin-B; disease muta 97.4 0.00026 8.8E-09 63.0 6.2 100 15-115 21-125 (245)
45 3hoc_A Filamin-A; calponin hom 97.2 0.00094 3.2E-08 60.8 8.3 99 16-115 49-152 (272)
46 1wku_A Alpha-actinin 3; calpon 97.0 0.0011 3.8E-08 59.3 6.9 90 15-107 28-122 (254)
47 1sh5_A Plectin 1, PLTN, PCN; a 97.0 0.0019 6.4E-08 57.1 8.0 94 16-113 14-118 (245)
48 1sjj_A Actinin; 3-helix bundle 97.0 0.0004 1.4E-08 70.3 3.7 95 15-116 122-224 (863)
49 3f7p_A Plectin-1; plakin, hemi 96.9 0.0021 7.1E-08 59.3 7.3 95 16-114 75-174 (296)
50 1dxx_A Dystrophin; structural 96.8 0.0022 7.7E-08 56.8 6.7 89 15-107 17-111 (246)
51 3ky9_A Proto-oncogene VAV; cal 96.3 0.0086 2.9E-07 58.8 7.8 83 17-99 8-106 (587)
52 1sjj_A Actinin; 3-helix bundle 96.2 0.0048 1.7E-07 62.5 5.9 81 16-99 10-95 (863)
53 4b7l_A Filamin-B; structural p 95.9 0.023 7.7E-07 53.2 8.4 99 17-116 20-123 (347)
54 1wix_A HOOK homolog 1, RSGI RU 95.1 0.03 1E-06 47.4 5.8 72 6-77 1-77 (164)
55 3qh9_A Liprin-beta-2; coiled-c 80.4 2.8 9.6E-05 32.0 5.1 33 185-217 20-52 (81)
56 1ci6_A Transcription factor AT 64.2 12 0.00041 26.6 5.0 34 183-216 29-62 (63)
57 1m5i_A APC protein; coiled-coi 63.8 11 0.00038 30.7 5.2 38 185-222 8-45 (125)
58 2wt7_B Transcription factor MA 61.4 12 0.00041 28.9 4.8 32 185-216 56-87 (90)
59 2yy0_A C-MYC-binding protein; 53.4 26 0.00088 24.3 5.0 29 182-210 17-45 (53)
60 2xdj_A Uncharacterized protein 39.3 42 0.0014 25.2 4.6 28 184-211 27-62 (83)
61 1hjb_A Ccaat/enhancer binding 29.5 92 0.0032 23.6 5.2 35 184-224 43-77 (87)
62 1go4_E MAD1 (mitotic arrest de 28.8 42 0.0014 26.3 3.1 17 192-208 13-29 (100)
63 1a93_B MAX protein, coiled coi 26.9 53 0.0018 21.1 2.8 20 186-205 9-28 (34)
64 4dzn_A Coiled-coil peptide CC- 26.0 94 0.0032 19.4 3.7 19 185-203 3-21 (33)
65 1jcd_A Major outer membrane li 25.8 70 0.0024 22.2 3.5 22 184-205 4-25 (52)
66 2zop_A Putative uncharacterize 25.7 33 0.0011 27.0 2.1 17 102-118 96-112 (114)
67 1dip_A Delta-sleep-inducing pe 24.1 48 0.0016 24.9 2.5 27 183-209 14-40 (78)
68 3brv_B NF-kappa-B essential mo 23.1 1.4E+02 0.0048 22.0 4.9 33 188-220 23-62 (70)
69 2oeb_A Hypothetical protein; u 22.9 38 0.0013 28.2 2.1 18 102-119 135-152 (155)
70 2e62_A Protein AT5G25060; CWF2 22.7 35 0.0012 24.6 1.5 12 212-223 16-27 (61)
71 2l5g_B Putative uncharacterize 22.2 1.3E+02 0.0043 20.2 4.1 24 183-206 15-38 (42)
72 1m7k_A Silencer of death domai 21.6 1.5E+02 0.0051 23.1 5.1 58 182-242 22-95 (99)
73 2wt7_A Proto-oncogene protein 21.5 2.1E+02 0.0071 19.8 5.6 25 185-209 31-55 (63)
74 3trt_A Vimentin; cytoskeleton, 21.1 1.1E+02 0.0038 21.7 4.1 22 185-206 50-71 (77)
75 2qjx_A Protein BIM1; calponin 20.6 44 0.0015 27.1 1.9 17 103-119 12-28 (127)
76 2ve7_A Kinetochore protein HEC 20.4 80 0.0027 28.8 3.8 24 184-207 185-208 (315)
No 1
>2r8u_A Microtubule-associated protein RP/EB family member 1; cytoskeleton, acetylation, cell cycle, cell division, cytoplasm, mitosis, phosphorylation; 1.35A {Homo sapiens} SCOP: a.40.1.1 PDB: 1vka_A 1txq_B 1wu9_A 2hkq_A 2hl5_A 3tq7_A 3gjo_A 1yib_A 1yig_A
Probab=100.00 E-value=7.4e-89 Score=623.62 Aligned_cols=242 Identities=38% Similarity=0.583 Sum_probs=128.3
Q ss_pred CCccc-ccccCCCccCHHHHHHHhHhhhcCCcchhhhcCCchhhhhhhhhhCCCCcccccccccCCChHHHHHHHHHHHH
Q 024284 1 MATNI-GMMDSAYFVGRNELLTWINNRLQLHLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQD 79 (269)
Q Consensus 1 m~~~~-gmm~~~~~~sR~eLL~WiN~~L~~~~~kIEel~sGaayCQlmd~l~Pg~v~l~kVkf~a~~e~e~~~N~KiLQ~ 79 (269)
||.|| |||+.++++||+|||+|||++|+++|+||||||||||||||||+||||+|||+||||+|++||||++||||||+
T Consensus 1 ma~nv~~t~~~~~~~sR~elL~WiN~~L~~~~~kiEel~tGaayCQlmd~l~P~~i~l~kVkf~a~~e~e~i~N~k~LQ~ 80 (268)
T 2r8u_A 1 MAVNVYSTSVTSDNLSRHDMLAWINESLQLNLTKIEQLCSGAAYCQFMDMLFPGSIALKKVKFQAKLEHEYIQNFKILQA 80 (268)
T ss_dssp CCCCCCTTSCCCCCCCHHHHHHHHHHHHTCCCCCGGGGGGSHHHHHHHHHHSTTSSCGGGCCTTCCSHHHHHHHHHHHHH
T ss_pred CceeEecccCcccccCHHHHHHHHHHHhcCCcchHHHcccchHHHHHHHHHccCCCchhhccCCCCCHHHHHHHHHHHHH
Confidence 89999 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCccccccccccccCCCcchHHHHHHHHHHHhhhCCCCCCCCCChhhhhccCCCCCC--CCCC--CCCCcccccCC
Q 024284 80 VFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERRCKGGKERS--SRGS--QKISKSLQTNN 155 (269)
Q Consensus 80 af~k~~I~k~ipV~kLiKgk~qdNlEFlQWfk~f~d~n~~~~~~~~Yd~~~rR~~~~~~~~--~~~~--~~~~~s~~~~~ 155 (269)
+|+|+||+|+|||++|||||||||||||||||+|||+|++| ++|||++||.+.+.+++ ...+ .+++++..++.
T Consensus 81 ~F~k~~I~k~ipV~kLvkgk~qDNlEFlqWfkkf~d~n~~~---~~Yd~~~~R~g~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (268)
T 2r8u_A 81 GFKRMGVDKIIPVDKLVKGKFQDNFEFVQWFKKFFDANYDG---KDYDPVAARQGQETAVAPSLVAPALNKPKKPLTSSS 157 (268)
T ss_dssp HHHHTTCCCCCCHHHHTTTCHHHHHHHHHHHHHHHHHHCCC---CCCCHHHHTC--------------------------
T ss_pred HHHHcCCCCccCHHHHhccCchhHHHHHHHHHHHHHHcCCC---CCCCHHHHhcCCCCCCCCCCCcccccCCCCcccccc
Confidence 99999999999999999999999999999999999999986 68999999964322111 1000 11111110000
Q ss_pred CCCCCCCC----CCCCCCCCCccc-cccCCCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhHHHHHHhcCCCCCChh
Q 024284 156 MHNAGSGD----IGHSKISGPRQA-KIYGANSAQEVQALSKEITDLKLSVDLLEKERDFYFAKLRDIEILCQTPELENLP 230 (269)
Q Consensus 156 ~~~~~~~~----~~~~~~s~p~~~-~~~~~~~~~~i~~L~~q~~elk~~ve~LEkERDFYF~KLRdIEiLcQ~~e~e~~~ 230 (269)
.++.++.+ ++.++.+.+.++ +...+.+..+++++.+|+++||+++++|||||||||+||||||||||+++.++.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~el~~lk~~v~~lEkERDFYF~KLRdIEilcQe~~~~~~~ 237 (268)
T 2r8u_A 158 AAPQRPISTQRTAAAPKAGPGVVRKNPGVGNGDDEAAELMQQVNVLKLTVEDLEKERDFYFGKLRNIELICQENEGENDP 237 (268)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCCCcccccCCCCCCCCCCCCCCcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccH
Confidence 00000000 000000011100 0111233456889999999999999999999999999999999999999888888
Q ss_pred HHHHHhhhhhccccc
Q 024284 231 VRISGLLILIILHFS 245 (269)
Q Consensus 231 ~~~~I~~ILYaT~~~ 245 (269)
++++|++||||||+.
T Consensus 238 ~~~~I~~ILYaTeeg 252 (268)
T 2r8u_A 238 VLQRIVDILYATDEG 252 (268)
T ss_dssp ---------------
T ss_pred HHHHHHHHhhccccC
Confidence 999999999999985
No 2
>4abo_I MAL3, microtubule integrity protein MAL3; structural protein, cytoskeleton, GTPase, END binding; HET: GTP GSP; 8.60A {Schizosaccharomyces pombe}
Probab=100.00 E-value=6.1e-60 Score=398.59 Aligned_cols=119 Identities=41% Similarity=0.712 Sum_probs=114.2
Q ss_pred ccCHHHHHHHhHhhhcCCcchhhhcCCchhhhhhhhhhCCCCcccccccccCCChHHHHHHHHHHHHHHHhcCccccccc
Q 024284 13 FVGRNELLTWINNRLQLHLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEV 92 (269)
Q Consensus 13 ~~sR~eLL~WiN~~L~~~~~kIEel~sGaayCQlmd~l~Pg~v~l~kVkf~a~~e~e~~~N~KiLQ~af~k~~I~k~ipV 92 (269)
.+||+|||+|||++|+++|+||||||||||||||||+|| |+|||+||||+|++||||++||||||++|+|+||+|+|||
T Consensus 5 ~~SR~eLL~WiN~~L~~n~tkIE~l~sGAaYCQlmD~lf-g~i~l~kVkf~a~~e~e~i~NfKlLQ~~F~k~~I~k~ipV 83 (145)
T 4abo_I 5 SESRQELLAWINQVTSLGLTRIEDCGKGYAMIQIFDSIY-QDIPLKKVNFECNNEYQYINNWKVLQQVFLKKGIDKVVDP 83 (145)
T ss_dssp --CHHHHHHHHHHHHTCCCCSGGGGGGSHHHHHHHHHHH-CCSCTTTSCSSCCSHHHHHHHHHHHHHHHHHHTCCCCCCH
T ss_pred cccHHHHHHHHHHHcCCCcchHHHccccHHHHHHHHHHh-cCcchhhcccCCCCHHHHHHHHHHHHHHHHHcCCCCccCH
Confidence 459999999999999999999999999999999999999 8999999999999999999999999999999999999999
Q ss_pred cccccCCCcchHHHHHHHHHHHhhhCCCCCCCCCChhhhhccC
Q 024284 93 NKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERRCKG 135 (269)
Q Consensus 93 ~kLiKgk~qdNlEFlQWfk~f~d~n~~~~~~~~Yd~~~rR~~~ 135 (269)
++|||||||||||||||||+|||+|+++ ++|||++||.+.
T Consensus 84 ~kLvKgk~QDNlEFlQWfkkf~d~n~~~---~~YD~~~~R~g~ 123 (145)
T 4abo_I 84 ERLSRCKMQDNLEFVQWAKRFWDQYYPG---GDYDALARRGNR 123 (145)
T ss_dssp HHHTTTCHHHHHHHHHHHHHHHHHHCCS---SCCCHHHHHTCC
T ss_pred HHHhccchHhHHHHHHHHHHHHHhcCCC---CCCCHHHhcCCC
Confidence 9999999999999999999999999986 689999999744
No 3
>1wyo_A Protein EB3, microtubule-associated protein RP/EB family member 3; CH domain, microtubule-binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=100.00 E-value=2.2e-58 Score=394.78 Aligned_cols=132 Identities=42% Similarity=0.783 Sum_probs=128.8
Q ss_pred CCccc-ccccCCCccCHHHHHHHhHhhhcCCcchhhhcCCchhhhhhhhhhCCCCcccccccccCCChHHHHHHHHHHHH
Q 024284 1 MATNI-GMMDSAYFVGRNELLTWINNRLQLHLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQD 79 (269)
Q Consensus 1 m~~~~-gmm~~~~~~sR~eLL~WiN~~L~~~~~kIEel~sGaayCQlmd~l~Pg~v~l~kVkf~a~~e~e~~~N~KiLQ~ 79 (269)
||.|| |||+.+.+.||+|||+|||++|+++|+|||+||+|||||||||+||||+|||+||||+++.||||++|||+||+
T Consensus 8 ~~~nv~~t~~~~~~~sr~ElL~WIN~~L~~~~~kiE~L~~GaayCQLmd~L~PgsV~l~KVkf~a~~e~e~~~N~k~lQ~ 87 (159)
T 1wyo_A 8 MAVNVYSTSVTSENLSRHDMLAWVNDSLHLNYTKIEQLCSGAAYCQFMDMLFPGCVHLRKVKFQAKLEHEYIHNFKVLQA 87 (159)
T ss_dssp CCCCCCCCSSCCCCCCHHHHHHHHHHHSCCCCSSGGGGGGCHHHHHHHHHHSTTSSCTTSCCTTCCSSHHHHHHHHHHHH
T ss_pred hheeeeeccCCCCchhHHHHHHHHHHHHCCCCchhhhcCccHHHHHHHHHHccCCCcHhhhccCCCChHHHHHHHHHHHH
Confidence 78899 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCccccccccccccCCCcchHHHHHHHHHHHhhhCCCCCCCCCChhhhhccC
Q 024284 80 VFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERRCKG 135 (269)
Q Consensus 80 af~k~~I~k~ipV~kLiKgk~qdNlEFlQWfk~f~d~n~~~~~~~~Yd~~~rR~~~ 135 (269)
+|+|+||+|+|||++|||||||||||||||||+|||+|+++ ++|||++||.+.
T Consensus 88 af~k~gV~k~ipV~kLvkgk~qdNlEFlqWfk~f~d~n~~~---~~Yd~~~~R~~~ 140 (159)
T 1wyo_A 88 AFKKMGVDKIIPVEKLVKGKFQDNFEFIQWFKKFFDANYDG---KDYNPLLARQGQ 140 (159)
T ss_dssp HHHHHTCCCCCCHHHHTTTCSHHHHHHHHHHHHHHHTTCCS---CCCCTTGGGCCC
T ss_pred HHHHcCCCCccCHHHHhcCCchhHHHHHHHHHHHHHHcCCC---CCCCHHHHhCCC
Confidence 99999999999999999999999999999999999999986 699999999754
No 4
>2qjx_A Protein BIM1; calponin homology domain, protein binding; 1.90A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.9e-57 Score=374.24 Aligned_cols=122 Identities=43% Similarity=0.749 Sum_probs=112.7
Q ss_pred ccCCCccCHHHHHHHhHhhhcCCcchhhhcCCchhhhhhhhhhCCCCcccccccccCCChHHHHHHHHHHHHHHHhcCcc
Q 024284 8 MDSAYFVGRNELLTWINNRLQLHLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIE 87 (269)
Q Consensus 8 m~~~~~~sR~eLL~WiN~~L~~~~~kIEel~sGaayCQlmd~l~Pg~v~l~kVkf~a~~e~e~~~N~KiLQ~af~k~~I~ 87 (269)
|+....+||+|||+|||++|+++|+||||||||||||||||+|| |+|||+||||+|++||||++|||+||++|+|++|+
T Consensus 4 ~~~~~~~sR~elL~WiN~~L~~n~~kiEel~tGaayCQl~d~l~-g~v~l~kVkf~a~~e~e~~~N~k~LQ~~f~k~~I~ 82 (127)
T 2qjx_A 4 MSAGIGESRTELLTWLNGLLNLNYKKIEECGTGAAYCQIMDSIY-GDLPMNRVKFNATAEYEFQTNYKILQSCFSRHGIE 82 (127)
T ss_dssp -------CHHHHHHHHHHHHTCCCCSGGGGGGSHHHHHHHHHHH-CCSCGGGSCTTCCSHHHHHHHHHHHHHHHHHTTCC
T ss_pred cccccccCHHHHHHHHHHHHcCCccHHHHccchHHHHHHHhhhc-cccCccccCCCCCCHHHHHHHHHHHHHHHHHcCCC
Confidence 44346679999999999999999999999999999999999999 67999999999999999999999999999999999
Q ss_pred ccccccccccCCCcchHHHHHHHHHHHhhhCCCCCCCCCChhhhhc
Q 024284 88 KHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERRC 133 (269)
Q Consensus 88 k~ipV~kLiKgk~qdNlEFlQWfk~f~d~n~~~~~~~~Yd~~~rR~ 133 (269)
|+|||++|||||||||||||||||+|||+|++| ++|||++||.
T Consensus 83 k~ipV~kLvKgrfQDNlEFlQWfkkf~d~n~~g---~~YDa~~~R~ 125 (127)
T 2qjx_A 83 KTVYVDKLIRCKFQDNLEFLQWLKKHWIRHKDE---SVYDPDARRK 125 (127)
T ss_dssp CCCCHHHHTTTCHHHHHHHHHHHHHHHHHHCCS---SCCCHHHHTT
T ss_pred CccCHHHHhccCchhHHHHHHHHHHHHHhcCCC---CCCCHHHhhc
Confidence 999999999999999999999999999999986 6999999995
No 5
>2qjz_A Microtubule-associated protein RP/EB family member 1; calponin homology domain, microtubule plus END, +TIP, protein binding; 1.25A {Homo sapiens} SCOP: a.40.1.1 PDB: 1pa7_A 1ueg_A 3co1_A 1v5k_A
Probab=100.00 E-value=1.6e-56 Score=369.22 Aligned_cols=122 Identities=44% Similarity=0.837 Sum_probs=117.5
Q ss_pred CCCccCHHHHHHHhHhhhcCCcchhhhcCCchhhhhhhhhhCCCCcccccccccCCChHHHHHHHHHHHHHHHhcCcccc
Q 024284 10 SAYFVGRNELLTWINNRLQLHLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKH 89 (269)
Q Consensus 10 ~~~~~sR~eLL~WiN~~L~~~~~kIEel~sGaayCQlmd~l~Pg~v~l~kVkf~a~~e~e~~~N~KiLQ~af~k~~I~k~ 89 (269)
+++++||+|||+|||++|+++|+|||+||+|||||||||+||||+|||+||||++++|+||++|||+||++|+|+||+|+
T Consensus 1 ~~~~~sr~ElL~WIN~~L~~~~~kiE~L~~Ga~yCqlmd~l~Pg~v~l~KVkf~a~~e~e~~~N~k~lq~af~k~gV~k~ 80 (123)
T 2qjz_A 1 GSDNLSRHDMLAWINESLQLNLTKIEQLCSGAAYCQFMDMLFPGSIALKKVKFQAKLEHEYIQNFKILQAGFKRMGVDKI 80 (123)
T ss_dssp --CCCCHHHHHHHHHHHHTCCCCCGGGGGGSHHHHHHHHHHSTTSSCGGGCCTTCCSHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred CCccccHHHHHHHHHHHHCCCCchHHHcCchHHHHHHHHHHccCCCcHHHhccCCCChHHHHHHHHHHHHHHHHcCCCCc
Confidence 46889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCcchHHHHHHHHHHHhhhCCCCCCCCCChhhhhcc
Q 024284 90 IEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERRCK 134 (269)
Q Consensus 90 ipV~kLiKgk~qdNlEFlQWfk~f~d~n~~~~~~~~Yd~~~rR~~ 134 (269)
|||++|||||||||||||||||+|||+|+++ ++|||++||.+
T Consensus 81 i~v~kLvkgk~qdnleflqW~k~f~d~n~~~---~~Yd~~~~R~~ 122 (123)
T 2qjz_A 81 IPVDKLVKGKFQDNFEFVQWFKKFFDANYDG---KDYDPVAARQG 122 (123)
T ss_dssp CCHHHHTTCCHHHHHHHHHHHHHHHHHHCCC---CCCCHHHHTSC
T ss_pred cCHHHHHcCCchhHHHHHHHHHHHHHHcCCC---CCCCHHHhhCc
Confidence 9999999999999999999999999999986 69999999963
No 6
>3tq7_B Microtubule-associated protein RP/EB family membe; CAP-Gly domain, protein-protein interaction, microtubule BIN cytoskeleton, protein binding; 2.30A {Homo sapiens} SCOP: a.245.1.1
Probab=99.92 E-value=9.8e-26 Score=174.15 Aligned_cols=61 Identities=51% Similarity=0.736 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHhHHHHHHhcCCCCCChhHHHHHhhhhhccccc
Q 024284 185 EVQALSKEITDLKLSVDLLEKERDFYFAKLRDIEILCQTPELENLPVRISGLLILIILHFS 245 (269)
Q Consensus 185 ~i~~L~~q~~elk~~ve~LEkERDFYF~KLRdIEiLcQ~~e~e~~~~~~~I~~ILYaT~~~ 245 (269)
++.+|++|+++||+++++|||||||||+||||||+|||+++.++.+++++|++|||||++.
T Consensus 2 ei~~L~~ei~eLk~~ve~lEkERDFYF~KLRdIEiLcQ~~e~~~~~~~~~I~~ILYaTeeg 62 (82)
T 3tq7_B 2 QILELNQQLVDLKLTVDGLEKERDFYFSKLRDIELICQEHESENSPVISGIIGILYATEEG 62 (82)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-----CHHHHHHHHHTCCC--
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHhccccC
Confidence 5778999999999999999999999999999999999998877778999999999999975
No 7
>4e61_A Protein BIM1; EB1-like motif, coiled-coil, spindle orientation, mitosis, K phosphorylation, mitotic spindle, microtubules, cell cycle; 2.45A {Saccharomyces cerevisiae}
Probab=99.88 E-value=7.9e-24 Score=170.14 Aligned_cols=64 Identities=39% Similarity=0.443 Sum_probs=56.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhHHHHHHhcCCCC-----------------------CChhHHHHHhhh
Q 024284 182 SAQEVQALSKEITDLKLSVDLLEKERDFYFAKLRDIEILCQTPEL-----------------------ENLPVRISGLLI 238 (269)
Q Consensus 182 ~~~~i~~L~~q~~elk~~ve~LEkERDFYF~KLRdIEiLcQ~~e~-----------------------e~~~~~~~I~~I 238 (269)
..+++++|++|+++|++++++||+||||||+||||||+|||+... +..+++++|++|
T Consensus 16 ~~~ei~~L~~ei~eLk~~ve~lEkERDFYF~KLRdIEiLcQe~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~kIq~I 95 (106)
T 4e61_A 16 SQETIGSLNEEIEQYKGTVSTLEIEREFYFNKLRDIEILVHTTQDLINEGVYKFNDETITGHGNGNGGALLRFVKKVESI 95 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC--------------CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccchhhcccccccchhHHHHHHHHHHH
Confidence 456889999999999999999999999999999999999997421 124789999999
Q ss_pred hhccccc
Q 024284 239 LIILHFS 245 (269)
Q Consensus 239 LYaT~~~ 245 (269)
||||++.
T Consensus 96 LYaTeeG 102 (106)
T 4e61_A 96 LYATAEG 102 (106)
T ss_dssp HHHHHHT
T ss_pred Hhccccc
Confidence 9999873
No 8
>3mtu_A Tropomyosin alpha-1 chain, microtubule-associated RP/EB family member 1; tropomysoin, overlap complex, coiled-coils, contractIle PROT; HET: MSE; 2.10A {Gallus gallus} PDB: 3mud_C*
Probab=99.86 E-value=4.8e-22 Score=151.01 Aligned_cols=61 Identities=34% Similarity=0.453 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHhHHHHHHhcCCCCCChhHHHHHhhhhhccccc
Q 024284 185 EVQALSKEITDLKLSVDLLEKERDFYFAKLRDIEILCQTPELENLPVRISGLLILIILHFS 245 (269)
Q Consensus 185 ~i~~L~~q~~elk~~ve~LEkERDFYF~KLRdIEiLcQ~~e~e~~~~~~~I~~ILYaT~~~ 245 (269)
.++.|+.+..++..++++||+||||||+||||||+|||+++.+..+++++|++|||||++.
T Consensus 10 kmqaLk~Ekdna~e~~e~lE~ERdFYf~KLRdiE~l~q~~e~e~~~l~~~I~~ILYat~~~ 70 (75)
T 3mtu_A 10 KMQMLKLDKENALDRAEQAEADKDFYFGKLRNIELICQENEGENDPVLQRIVDILYATDEG 70 (75)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGTCHHHHHHHHHHHCBTTB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhccCcC
Confidence 4567899999999999999999999999999999999999887789999999999999874
No 9
>1wjo_A T-plastin; CH domain, actin binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: a.40.1.1 PDB: 2d85_A
Probab=98.75 E-value=2.2e-08 Score=82.30 Aligned_cols=100 Identities=17% Similarity=0.211 Sum_probs=85.0
Q ss_pred CccCHHHHHHHhHhhhcC-----Ccchhh--hcCCchhhhhhhhhhCCCCcccccccccCCChHHHHHHHHHHHHHHHhc
Q 024284 12 YFVGRNELLTWINNRLQL-----HLSRIE--EAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNKL 84 (269)
Q Consensus 12 ~~~sR~eLL~WiN~~L~~-----~~~kIE--el~sGaayCQlmd~l~Pg~v~l~kVkf~a~~e~e~~~N~KiLQ~af~k~ 84 (269)
--++..+||.|+|..|+. +++... ++++|.+||+|+|.|-|+.|+..-|+=..-++.|...|.+..=++-+|+
T Consensus 5 ~~i~d~~ll~W~N~kl~~~g~~~~I~~F~d~sl~dG~~~l~Ll~~i~P~~vd~~lv~~~~L~~~d~~~Na~~ais~Arkl 84 (124)
T 1wjo_A 5 SSGNDDIIVNWVNRTLSEAGKSTSIQSFKDKTISSSLAVVDLIDAIQPGCINYDLVKSGNLTEDDKHNNAKYAVSMARRI 84 (124)
T ss_dssp CCSCCHHHHHHHHHHHHHHTCSCCCSCTTCTTGGGTHHHHHHHHHHSTTSCCTTTSCCSSCCHHHHHHHHHHHHHHHHHT
T ss_pred CccCHHHHHHHHHHHHHhcCCCcccCCCCcchhhhhHHHHHHHHHHCcCccCHHHhcCCCCCHHHHHHHHHHHHHHHHHc
Confidence 467899999999999863 455554 8899999999999999999998877643447899999999988888999
Q ss_pred CccccccccccccCCCcchHHHHHHHH
Q 024284 85 KIEKHIEVNKLVKGRPLDNLEFLQWLK 111 (269)
Q Consensus 85 ~I~k~ipV~kLiKgk~qdNlEFlQWfk 111 (269)
|+...+..|.++.|+..-++-|+.=+.
T Consensus 85 G~~~~l~pEDIve~~pK~ilt~va~l~ 111 (124)
T 1wjo_A 85 GARVYALPEDLVEVKPKMVMTVFACLM 111 (124)
T ss_dssp CCSCCCCHHHHHHTCTTTTTHHHHHHH
T ss_pred CCCcccCHHHHhcCcchhhHHHHHHHH
Confidence 999999999999999988998775443
No 10
>2d89_A EHBP1 protein; all alpha, calponin homology domain, actin binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.63 E-value=7.4e-08 Score=77.94 Aligned_cols=101 Identities=21% Similarity=0.271 Sum_probs=77.9
Q ss_pred CCCccCHHHHHHHhHhhhcCCc--chhh----hcCCchhhhhhhhhhCCCCcccccccccCCChHHHHHHHHHHHHHHHh
Q 024284 10 SAYFVGRNELLTWINNRLQLHL--SRIE----EAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNK 83 (269)
Q Consensus 10 ~~~~~sR~eLL~WiN~~L~~~~--~kIE----el~sGaayCQlmd~l~Pg~v~l~kVkf~a~~e~e~~~N~KiLQ~af~k 83 (269)
+.-...+..||.|+|..+.- | .+|. ...+|-|+|.|+|.+.|+.|++..++- .+-++|.+..-++.++
T Consensus 5 ~~~~~~~~~LL~W~~~~~~~-y~~v~v~nFs~sw~dG~af~aLi~~~~P~lid~~~l~~-----~~~~~n~~~af~~a~~ 78 (119)
T 2d89_A 5 SSGPNASQSLLVWCKEVTKN-YRGVKITNFTTSWRNGLSFCAILHHFRPDLIDYKSLNP-----QDIKENNKKAYDGFAS 78 (119)
T ss_dssp SSCCCCHHHHHHHHHHHTTT-CSSCCCCCSSHHHHTTHHHHHHHHHHCTTTSCGGGCCT-----TCSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhcc-CCCCCCCCccccccccHHHHHHHHHHCcCcCChhhhcc-----cCHHHHHHHHHHHHHH
Confidence 34445789999999999952 2 1244 456899999999999999988777653 3457788776666699
Q ss_pred cCccccccccccccCCCcchHHHHHHHHHHHhh
Q 024284 84 LKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDS 116 (269)
Q Consensus 84 ~~I~k~ipV~kLiKgk~qdNlEFlQWfk~f~d~ 116 (269)
+||++.++.+.++.+.-.|-.-.+.++-.||..
T Consensus 79 LGi~~ll~peDi~~~~~pD~ksvmtYvs~l~~~ 111 (119)
T 2d89_A 79 IGISRLLEPSDMVLLAIPDKLTVMTYLYQIRAH 111 (119)
T ss_dssp HTCCCCSCHHHHHHSSSCCHHHHHHHHHHHHHH
T ss_pred hCCCcccCHHHHhccCCCcHHHHHHHHHHHHHH
Confidence 999999999999988767777777777766664
No 11
>2d87_A Smoothelin splice isoform L2; all alpha, calponin homology domain, actin binding, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2jv9_A 2k3s_A
Probab=98.60 E-value=9.5e-08 Score=78.41 Aligned_cols=96 Identities=14% Similarity=0.250 Sum_probs=73.2
Q ss_pred cCHHHHHHHhHhhhcCCc--chhh----hcCCchhhhhhhhhhCCCCcccccccccCCChHHHHHHHHHHHHHHHh-cCc
Q 024284 14 VGRNELLTWINNRLQLHL--SRIE----EAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNK-LKI 86 (269)
Q Consensus 14 ~sR~eLL~WiN~~L~~~~--~kIE----el~sGaayCQlmd~l~Pg~v~l~kVkf~a~~e~e~~~N~KiLQ~af~k-~~I 86 (269)
-.+..||.|+|..+.- | .+|. ...+|.|||.|+|.+.|+.|++..+. ..+-++|++..-++.++ +||
T Consensus 7 ~~k~~LL~W~q~~~~~-y~~v~V~nFs~sw~DG~af~aLih~~~P~lid~~~l~-----~~~~~~n~~~af~~Ae~~lgi 80 (128)
T 2d87_A 7 GIKQMLLDWCRAKTRG-YEHVDIQNFSSSWSDGMAFCALVHNFFPEAFDYGQLS-----PQNRRQNFEVAFSSAETHADC 80 (128)
T ss_dssp CHHHHHHHHHHHHSSS-CTTCCCSCTTTTTTSSHHHHHHHHHHCTTTSCSTTSC-----SSCHHHHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHhcc-CCCCCCCCccccccccHHHHHHHHHHCcCcCCHHHcC-----ccCHHHHHHHHHHHHHHcCCC
Confidence 3578999999999863 2 1233 45889999999999999998877754 34567888877776666 899
Q ss_pred cccccccccccCCCcchHHHHHHHHHHHh
Q 024284 87 EKHIEVNKLVKGRPLDNLEFLQWLKRYCD 115 (269)
Q Consensus 87 ~k~ipV~kLiKgk~qdNlEFlQWfk~f~d 115 (269)
++.++.+.++.+.--|..-.+.++-.||.
T Consensus 81 p~lL~peD~v~~~~pD~ksvmtYvs~l~~ 109 (128)
T 2d87_A 81 PQLLDTEDMVRLREPDWKCVYTYIQEFYR 109 (128)
T ss_dssp CCCSCHHHHHHSSSCCHHHHHHHHHHHHH
T ss_pred CcccCHHHHhccCCccHHHHHHHHHHHHH
Confidence 99999999999886666655555555544
No 12
>1bkr_A Spectrin beta chain; filamentous actin-binding domain, cytoskeleton; 1.10A {Homo sapiens} SCOP: a.40.1.1 PDB: 1aa2_A
Probab=98.49 E-value=1.7e-07 Score=74.76 Aligned_cols=94 Identities=14% Similarity=0.304 Sum_probs=68.4
Q ss_pred CHHHHHHHhHhhhcCCcc--hhhh----cCCchhhhhhhhhhCCCCcccccccccCCChHHHHHHHHHHHHHHH-hcCcc
Q 024284 15 GRNELLTWINNRLQLHLS--RIEE----AASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFN-KLKIE 87 (269)
Q Consensus 15 sR~eLL~WiN~~L~~~~~--kIEe----l~sGaayCQlmd~l~Pg~v~l~kVkf~a~~e~e~~~N~KiLQ~af~-k~~I~ 87 (269)
.+..||.|+|..+.. |. +|.. ..+|-|+|.|++.+.|+.|++..+. ..+-.+|.+..-+... ++||+
T Consensus 4 ~k~~LL~W~q~~~~~-y~~v~v~nFs~sw~dG~af~aLih~~~P~lid~~~l~-----~~~~~~n~~~af~~Ae~~lgi~ 77 (109)
T 1bkr_A 4 AKDALLLWCQMKTAG-YPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLK-----KSNAHYNLQNAFNLAEQHLGLT 77 (109)
T ss_dssp HHHHHHHHHHHHTTT-CTTCCCSSSSGGGTTSHHHHHHHHHHCGGGCCGGGCC-----TTCHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHcc-CCCCCCCCCcccccccHHHHHHHHHHCcCCCCHHHcC-----cCCHHHHHHHHHHHHHHHcCCC
Confidence 477899999988752 32 3444 4889999999999999999887764 3355777776555554 89999
Q ss_pred ccccccccccCCCcchHHHHHHHHHHHh
Q 024284 88 KHIEVNKLVKGRPLDNLEFLQWLKRYCD 115 (269)
Q Consensus 88 k~ipV~kLiKgk~qdNlEFlQWfk~f~d 115 (269)
+.++.+.++.++. |..-.+.++-.||.
T Consensus 78 ~ll~~eDv~~~~p-D~ksi~tYvs~~~~ 104 (109)
T 1bkr_A 78 KLLDPEDISVDHP-DEKSIITYVVTYYH 104 (109)
T ss_dssp CCCCHHHHSSSSC-CHHHHHHHHHHHHH
T ss_pred ccCCHHHccCCCC-cHHHHHHHHHHHHH
Confidence 9999999876653 55555555444443
No 13
>1wyq_A Spectrin beta chain, brain 2; NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Homo sapiens}
Probab=98.47 E-value=2.1e-07 Score=76.17 Aligned_cols=97 Identities=10% Similarity=0.207 Sum_probs=70.9
Q ss_pred cCHHHHHHHhHhhhcCCcc--hhhh----cCCchhhhhhhhhhCCCCcccccccccCCChHHHHHHHHHHHHHHH-hcCc
Q 024284 14 VGRNELLTWINNRLQLHLS--RIEE----AASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFN-KLKI 86 (269)
Q Consensus 14 ~sR~eLL~WiN~~L~~~~~--kIEe----l~sGaayCQlmd~l~Pg~v~l~kVkf~a~~e~e~~~N~KiLQ~af~-k~~I 86 (269)
..+..||.|+|..+.- |. +|.. ..+|.|||.|+|.+.|+.|++..+.- .+-++|++..-+..+ ++||
T Consensus 7 s~k~~LL~W~q~~~~~-y~~v~V~nFs~sw~DG~Af~aLih~~~P~lid~~~l~~-----~~~~~n~~~af~~Ae~~Lgi 80 (127)
T 1wyq_A 7 GAKDALLLWCQMKTAG-YPNVNVHNFTTSWRDGLAFNAIVHKHRPDLLDFESLKK-----CNAHYNLQNAFNLAEKELGL 80 (127)
T ss_dssp CSTHHHHHHHHHHHHT-SSSCCCSCSSTTSSSSHHHHHHHHHHCTTTCCTTTSCS-----SCCHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHhc-CCCCCCCCCcccccccHHHHHHHHHHCcCcCCHHHhCc-----CCHHHHHHHHHHHHHHHcCC
Confidence 4688999999998752 22 3444 48899999999999999998877652 244678777666665 7999
Q ss_pred cccccccccccCCC--cchHHHHHHHHHHHhh
Q 024284 87 EKHIEVNKLVKGRP--LDNLEFLQWLKRYCDS 116 (269)
Q Consensus 87 ~k~ipV~kLiKgk~--qdNlEFlQWfk~f~d~ 116 (269)
++.++.+.++.++. .-++.++.-|+.+|..
T Consensus 81 ~~ll~~eDv~~~~pDeksimtYvs~l~~~~~~ 112 (127)
T 1wyq_A 81 TKLLDPEDVNVDQPDEKSIITYVATYYHYFSK 112 (127)
T ss_dssp CCCSCTTTSCSSSCCHHHHHHHHHHHHHHHHH
T ss_pred CcccCHHHhccCCCcHHHHHHHHHHHHHHhhc
Confidence 99999999887764 3345555555555543
No 14
>1wyl_A NEDD9 interacting protein with calponin homology and LIM domains; CH domain, mical, structural genomics; NMR {Homo sapiens} PDB: 2dk9_A
Probab=98.39 E-value=5.8e-07 Score=72.36 Aligned_cols=94 Identities=20% Similarity=0.355 Sum_probs=70.4
Q ss_pred cCHHHHHHHhHhhhc----C---CcchhhhcCCchhhhhhhhhhCCCCcccccccccCCChHHHHHHHHHHHHHHHh-cC
Q 024284 14 VGRNELLTWINNRLQ----L---HLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNK-LK 85 (269)
Q Consensus 14 ~sR~eLL~WiN~~L~----~---~~~kIEel~sGaayCQlmd~l~Pg~v~l~kVkf~a~~e~e~~~N~KiLQ~af~k-~~ 85 (269)
-.+..||.|+|..+. . |++ ....+|-|+|-|++.+.|+.|++..+. ..+-.+|.+..-++.++ +|
T Consensus 7 ~~~~~LL~W~q~~~~~y~~v~v~nFs--~sw~dG~af~aLih~~~P~lid~~~l~-----~~~~~~n~~~af~~Ae~~lg 79 (116)
T 1wyl_A 7 GTQEELLRWCQEQTAGYPGVHVSDLS--SSWADGLALCALVYRLQPGLLEPSELQ-----GLGALEATAWALKVAENELG 79 (116)
T ss_dssp SSHHHHHHHHHHHHHHSTTCCCSCTT--TTTTSSHHHHHHHHHHCTTSCCCSSGG-----GCCHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHhccCCCCCCCCcc--ccccccHHHHHHHHHHCcCCCCHHHhc-----cCCHHHHHHHHHHHHHHHcC
Confidence 357889999999874 2 344 256889999999999999999877765 24567888887777776 99
Q ss_pred ccccccccccccC-CCcchHHHHHHHHHHH
Q 024284 86 IEKHIEVNKLVKG-RPLDNLEFLQWLKRYC 114 (269)
Q Consensus 86 I~k~ipV~kLiKg-k~qdNlEFlQWfk~f~ 114 (269)
|++.++.+.++.+ .-.-++.++.-|+++|
T Consensus 80 i~~lL~peD~~~~~d~ksv~tYvs~l~~~~ 109 (116)
T 1wyl_A 80 ITPVVSAQAVVAGSDPLGLIAYLSHFHSAF 109 (116)
T ss_dssp CCCCSCHHHHHHTSCHHHHHHHHHHHHHHS
T ss_pred CccccCHHHHhcCCchhHHHHHHHHHHHHc
Confidence 9999999999988 3333444554444443
No 15
>1bhd_A Utrophin; calponin homology, actin binding, structural protein; 2.00A {Homo sapiens} SCOP: a.40.1.1
Probab=98.37 E-value=2.2e-07 Score=75.16 Aligned_cols=95 Identities=17% Similarity=0.233 Sum_probs=68.9
Q ss_pred cCHHHHHHHhHhhhcCCcc--hhhh----cCCchhhhhhhhhhCCCCcccccccccCCChHHHHHHHHHHHH-HHHhcCc
Q 024284 14 VGRNELLTWINNRLQLHLS--RIEE----AASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQD-VFNKLKI 86 (269)
Q Consensus 14 ~sR~eLL~WiN~~L~~~~~--kIEe----l~sGaayCQlmd~l~Pg~v~l~kVkf~a~~e~e~~~N~KiLQ~-af~k~~I 86 (269)
-.+..||.|+|..+. .|. +|.. ..+|-|||.|+|.+.|+.|++..+. ..+-.+|.+..-+ |-+++||
T Consensus 8 ~~~~~LL~W~q~~~~-~y~~v~v~nFs~sw~DG~af~aLih~~~P~lid~~~l~-----~~~~~~n~~~af~~Ae~~lgi 81 (118)
T 1bhd_A 8 NSEKILLSWVRQTTR-PYSQVNVLNFTTSWTDGLAFNAVLHRHKPDLFSWDKVV-----KMSPIERLEHAFSKAQTYLGI 81 (118)
T ss_dssp HHHHHHHHHHHHHHT-TSTTCCCCSSSGGGTTSHHHHHHHHHHCGGGSCHHHHH-----HSCHHHHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHhc-cCCCCCCCCCcccccCcHHHHHHHHHHCcCcCCHHHhC-----cCCHHHHHHHHHHHHHHHcCC
Confidence 367889999999985 221 3444 4589999999999999999887765 2234666665444 3349999
Q ss_pred cccccccccccCCCcchHHHHHHHHHHHh
Q 024284 87 EKHIEVNKLVKGRPLDNLEFLQWLKRYCD 115 (269)
Q Consensus 87 ~k~ipV~kLiKgk~qdNlEFlQWfk~f~d 115 (269)
++.++.+.++.++ .|-.-.+.++-.||.
T Consensus 82 ~~ll~~eDv~~~~-pD~ksvmtYvs~l~~ 109 (118)
T 1bhd_A 82 EKLLDPEDVAVRL-PDKKSIIMYLTSLFE 109 (118)
T ss_dssp CCCSCHHHHHTSC-CCHHHHHHHHHHHHH
T ss_pred CcccCHHHhhcCC-CcHHHHHHHHHHHHH
Confidence 9999999988765 455566666655555
No 16
>2yrn_A Neuron navigator 2 isoform 4; calponin homolgy domain, helicase, all alpha, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.30 E-value=1e-06 Score=71.58 Aligned_cols=99 Identities=16% Similarity=0.255 Sum_probs=81.4
Q ss_pred HHHHHHHhHhhhcCC-----cch-hhhcCCchhhhhhhhhhCCCCcccccccccCCChHHHHHHHHHHHHHHHhcCccc-
Q 024284 16 RNELLTWINNRLQLH-----LSR-IEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEK- 88 (269)
Q Consensus 16 R~eLL~WiN~~L~~~-----~~k-IEel~sGaayCQlmd~l~Pg~v~l~kVkf~a~~e~e~~~N~KiLQ~af~k~~I~k- 88 (269)
++.+..|||..|... +.. .++|.+|...|+|++.|-|++|+ +++=.+......++|....-+++++.||..
T Consensus 20 ~~~f~~WIN~~L~~~~~~~~v~dl~~dL~DGv~L~~Lle~L~~~~l~--~~~~~p~~~~~~~eNv~~aL~~~~~~gv~~~ 97 (129)
T 2yrn_A 20 KRIYTDWANHYLAKSGHKRLIRDLQQDVTDGVLLAQIIQVVANEKIE--DINGCPKNRSQMIENIDACLNFLAAKGINIQ 97 (129)
T ss_dssp HHHHHHHHHHHHHHTCCCSCCSCHHHHSSSSHHHHHHHHHHTTCCCT--TCCSSCCSTTHHHHHHHHHHHHHHHHTCCCT
T ss_pred HHHHHHHHHHHhcccCCCccchhHHHHcccHHHHHHHHHHHhcCCcc--cccCCCCcHHHHHHHHHHHHHHHHHhCCccc
Confidence 468999999988532 333 47899999999999999999887 666567888999999999999999999985
Q ss_pred cccccccccCCCcchHHHHHHHHHHHhh
Q 024284 89 HIEVNKLVKGRPLDNLEFLQWLKRYCDS 116 (269)
Q Consensus 89 ~ipV~kLiKgk~qdNlEFlQWfk~f~d~ 116 (269)
.|..+.++.|+..--|-++--+-+||.+
T Consensus 98 ~i~~~DI~dgn~~~iL~Llw~L~r~~q~ 125 (129)
T 2yrn_A 98 GLSAEEIRNGNLKAILGLFFSLSRYKQQ 125 (129)
T ss_dssp TCCHHHHHHTCHHHHHHHHHHHHHHHSS
T ss_pred CCChhhhhcCCHhHHHHHHHHHHHHHhh
Confidence 6888899999887777777556677654
No 17
>1h67_A Calponin alpha; cytoskeleton, calponin homology domain, actin binding,; NMR {Gallus gallus} SCOP: a.40.1.1
Probab=98.26 E-value=9e-07 Score=70.24 Aligned_cols=81 Identities=21% Similarity=0.459 Sum_probs=67.9
Q ss_pred HHHHHHHhHhhhcCCcc--hhhhcCCchhhhhhhhhhCCCCcccccccccCCChHHHHHHHHHHHHHHHhcCcccc--cc
Q 024284 16 RNELLTWINNRLQLHLS--RIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKH--IE 91 (269)
Q Consensus 16 R~eLL~WiN~~L~~~~~--kIEel~sGaayCQlmd~l~Pg~v~l~kVkf~a~~e~e~~~N~KiLQ~af~k~~I~k~--ip 91 (269)
+.|+..|||..|+.++. =.+.|.+|++-|++++.+.||+|+ |++ .++..+....|...+-++.+++|++.. +.
T Consensus 5 e~e~~~WIe~~l~~~~~~~l~~~L~dGvvLCkL~N~l~P~~v~--ki~-~~~~~f~~~eNI~~Fl~a~~~~Gv~~~~lF~ 81 (108)
T 1h67_A 5 ERQLRVWIEGATGRRIGDNFMDGLKDGVILCELINKLQPGSVQ--KVN-DPVQNWHKLENIGNFLRAIKHYGVKPHDIFE 81 (108)
T ss_dssp SHHHHHHHHHHHSCCCCSCHHHHHHHCSHHHHHHHHHSTTSST--TCC-CTTSSHHHHHHHHHHHHHHHHHTSCGGGSCC
T ss_pred HHHHHHHHHHHhCCCCcHHHHHHHccHHHHHHHHHHhCCCCcc--ccc-ccccchHHHHHHHHHHHHHHHcCCCcccccC
Confidence 57999999999988764 367899999999999999999987 564 455678899999999999999999864 56
Q ss_pred ccccccCC
Q 024284 92 VNKLVKGR 99 (269)
Q Consensus 92 V~kLiKgk 99 (269)
...|..|+
T Consensus 82 ~~DL~e~k 89 (108)
T 1h67_A 82 ANDLFENT 89 (108)
T ss_dssp HHHHHHTC
T ss_pred hhHHHhCC
Confidence 66777765
No 18
>2d88_A Protein mical-3; all alpha, calponin homology domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2e9k_A
Probab=98.19 E-value=3.7e-06 Score=68.12 Aligned_cols=94 Identities=16% Similarity=0.288 Sum_probs=69.3
Q ss_pred cCHHHHHHHhHhhhcC-------CcchhhhcCCchhhhhhhhhhCCCCcccccccccCCChHHHHHHHHHHHHHHH-hcC
Q 024284 14 VGRNELLTWINNRLQL-------HLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFN-KLK 85 (269)
Q Consensus 14 ~sR~eLL~WiN~~L~~-------~~~kIEel~sGaayCQlmd~l~Pg~v~l~kVkf~a~~e~e~~~N~KiLQ~af~-k~~ 85 (269)
.-+..||.|+|..+.. |++ ....+|-|||-|++.+.|+.|++..+. ..+-.+|.+..-+... ++|
T Consensus 9 ~~~~~LL~W~q~~~~~y~~v~v~nFs--~sw~DG~af~aLih~~~P~lid~~~l~-----~~~~~~n~~~af~~Ae~~lg 81 (121)
T 2d88_A 9 ARSSKLLGWCQRQTDGYAGVNVTDLT--MSWKSGLALCAIIHRYRPDLIDFDSLD-----EQNVEKNNQLAFDIAEKELG 81 (121)
T ss_dssp SSSCHHHHHHHHHSTTSSSCCCCCSS--HHHHTSHHHHHHHHHHCTTTSCTTTSC-----TTCHHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHhccCCCCCCCCch--hhccccHHHHHHHHHhCcCcCCHHHcC-----ccCHHHHHHHHHHHHHHHcC
Confidence 3467899999999852 333 256789999999999999998877654 3355788887666666 599
Q ss_pred ccccccccccccCCCcch---HHHHHHHHHHH
Q 024284 86 IEKHIEVNKLVKGRPLDN---LEFLQWLKRYC 114 (269)
Q Consensus 86 I~k~ipV~kLiKgk~qdN---lEFlQWfk~f~ 114 (269)
|++.++.+.++.+.--|- +.++.-|+++|
T Consensus 82 i~~lL~peD~~~~~~pD~ksimtYvs~l~~~~ 113 (121)
T 2d88_A 82 ISPIMTGKEMASVGEPDKLSMVMYLTQFYEMF 113 (121)
T ss_dssp CCCSSCHHHHHHSSCCCHHHHHHHHHHHHHHH
T ss_pred CCCcCCHHHHhccCCCcHHHHHHHHHHHHHHc
Confidence 999999999998644444 44555444444
No 19
>1sh5_A Plectin 1, PLTN, PCN; actin-binding domain, calponin-homology domain, structural protein; 2.00A {Mus musculus} SCOP: a.40.1.1 a.40.1.1 PDB: 1sh6_A 1mb8_A
Probab=98.18 E-value=1.7e-06 Score=76.81 Aligned_cols=96 Identities=16% Similarity=0.241 Sum_probs=73.9
Q ss_pred HHHHHHHhHhhhcCCc--chh----hhcCCchhhhhhhhhhCCCCcccccccccCCChHHHHHHHHHHHHHHHh-cCccc
Q 024284 16 RNELLTWINNRLQLHL--SRI----EEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNK-LKIEK 88 (269)
Q Consensus 16 R~eLL~WiN~~L~~~~--~kI----Eel~sGaayCQlmd~l~Pg~v~l~kVkf~a~~e~e~~~N~KiLQ~af~k-~~I~k 88 (269)
+..||.|+|..+.. | .+| .+..+|.|+|.|++.+.|+.||+..+. +.+..+|.+..-+..++ +||++
T Consensus 135 ~~~LL~W~~~~~~~-~~~~~v~nF~~s~~DG~a~~aLi~~~~P~~i~~~~l~-----~~~~~~n~~~a~~~a~~~lGi~~ 208 (245)
T 1sh5_A 135 KEKLLLWSQRMVEG-YQGLRCDNFTTSWRDGRLFNAIIHRHKPMLIDMNKVY-----RQTNLENLDQAFSVAERDLGVTR 208 (245)
T ss_dssp HHHHHHHHHHHTTT-STTCCCCCSSGGGTTSHHHHHHHHTTCTTTCCHHHHH-----HSCHHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHHHHHhcc-CCCcccCCccccccchHHHHHHHHHHCCCCCCHHHcc-----cCCHHHHHHHHHHHHHHhCCCCc
Confidence 44599999998864 2 123 457899999999999999999988765 23568898888887775 99999
Q ss_pred cccccccccCCC--cchHHHHHHHHHHHhhh
Q 024284 89 HIEVNKLVKGRP--LDNLEFLQWLKRYCDSV 117 (269)
Q Consensus 89 ~ipV~kLiKgk~--qdNlEFlQWfk~f~d~n 117 (269)
.+..+.++.++. .-++.|+..|+..|...
T Consensus 209 ~l~peDi~~~~pd~k~i~tyva~l~~~~~~~ 239 (245)
T 1sh5_A 209 LLDPEDVDVPQPDEKSIITYVSSLYDAMPRV 239 (245)
T ss_dssp CCCHHHHSSSSCCHHHHHHHHHHHHHHCC--
T ss_pred cCCHHHhccCCCcHHHHHHHHHHHHHHcCCC
Confidence 999999886644 66777887777666543
No 20
>3i6x_A P195, RAS GTPase-activating-like protein iqgap1; all helical, calmodulin-binding, cell membrane, membrane, phosphoprotein, protein binding; 2.50A {Homo sapiens}
Probab=98.16 E-value=2.2e-06 Score=74.89 Aligned_cols=100 Identities=15% Similarity=0.224 Sum_probs=76.5
Q ss_pred cCHHHHHHHhHhhhcCCcch----hhhcCCchhhhhhhhhhCCCCccccccc------c-cCCChHHHHHHHHHHHHHHH
Q 024284 14 VGRNELLTWINNRLQLHLSR----IEEAASGAVQCQMLDMTYPGVVPMHKVN------F-DAKTEYDMIQNYKVLQDVFN 82 (269)
Q Consensus 14 ~sR~eLL~WiN~~L~~~~~k----IEel~sGaayCQlmd~l~Pg~v~l~kVk------f-~a~~e~e~~~N~KiLQ~af~ 82 (269)
--+.|+..||+..|+.++.. .|-|.+|++-|+|++.|.||+||++||. | .++..+.+..|...+-.+.+
T Consensus 47 ~~~~e~~~WIe~~lg~~l~~~~~l~~~LrdGvvLCkL~N~l~Pg~vp~kkI~~~~~~~~~~~~~~F~~~eNI~~FL~ac~ 126 (193)
T 3i6x_A 47 CHLEEAKRWMEACLGEDLPPTTELEEGLRNGVYLAKLGNFFSPKVVSLKKIYDREQTRYKATGLHFRHTDNVIQWLNAMD 126 (193)
T ss_dssp HHHHHHHHHHHHHHSSCCCCGGGHHHHHTTSHHHHHHHHHHCTTTCCGGGSTTTTCHHHHHSCCCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCChHHHHHHhccHHHHHHHHHHHCCCCCCccccCCcccccccCcccchHHHHHHHHHHHHHH
Confidence 34568999999999988864 5778999999999999999999999983 3 35667788899999999999
Q ss_pred hcCccc--cccccccccCC-CcchHHHHHHHHHH
Q 024284 83 KLKIEK--HIEVNKLVKGR-PLDNLEFLQWLKRY 113 (269)
Q Consensus 83 k~~I~k--~ipV~kLiKgk-~qdNlEFlQWfk~f 113 (269)
++||+. .+....|..|+ +.--+.-|..+.++
T Consensus 127 ~~Gvp~~~lFet~DL~e~kn~~~V~~cL~aL~~~ 160 (193)
T 3i6x_A 127 EIGLPKIFYPETTDIYDRKNMPRCIYCIHALSLY 160 (193)
T ss_dssp HHTCCGGGCCCHHHHHSCSCHHHHHHHHHHHHHH
T ss_pred HcCCCcccCCCcHHHhcCCCHHHHHHHHHHHHHH
Confidence 999986 35566777775 22233344444444
No 21
>1ujo_A Transgelin; CH domain, actin binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Mus musculus} SCOP: a.40.1.1
Probab=98.14 E-value=5.2e-06 Score=69.15 Aligned_cols=99 Identities=13% Similarity=0.195 Sum_probs=76.2
Q ss_pred HHHHHHHhHhhhcCCcc--------hhhhcCCchhhhhhhhhhCC---CCcccccccccCCChHHHHHHHHHHHHHHHhc
Q 024284 16 RNELLTWINNRLQLHLS--------RIEEAASGAVQCQMLDMTYP---GVVPMHKVNFDAKTEYDMIQNYKVLQDVFNKL 84 (269)
Q Consensus 16 R~eLL~WiN~~L~~~~~--------kIEel~sGaayCQlmd~l~P---g~v~l~kVkf~a~~e~e~~~N~KiLQ~af~k~ 84 (269)
..|+..||+..|+.++. =.|.|.+|++-|+|++.|.| |+|++ |++ .++..+.+..|...+-++.+++
T Consensus 11 e~e~~~WIe~~l~~~l~~~~~~~~~f~~~LkDGvvLCkL~N~l~P~~~~~I~~-kin-~~~~~f~~~eNI~~FL~ac~~~ 88 (144)
T 1ujo_A 11 EERLVEWIVVQCGPDVGRPDRGRLGFQVWLKNGVILSKLVNSLYPEGSKPVKV-PEN-PPSMVFKQMEQVAQFLKAAEDY 88 (144)
T ss_dssp HHHHHHHHHHHHCTTTCCCCSSSSSHHHHTTSSHHHHHHHHHHSCTTTCCSCC-CSS-CCCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCcCCcHHHHHHHHcchHHHHHHHHHhCcccCCCcce-eec-CCCchhHHHHHHHHHHHHHHHc
Confidence 47999999999998874 25679999999999999999 88873 554 4567889999999999999999
Q ss_pred Cccc--cccccccccCCCcc-hHHHHHHHHHHHhh
Q 024284 85 KIEK--HIEVNKLVKGRPLD-NLEFLQWLKRYCDS 116 (269)
Q Consensus 85 ~I~k--~ipV~kLiKgk~qd-NlEFlQWfk~f~d~ 116 (269)
||+. .+....|..+|-.. =+.=|..+.++...
T Consensus 89 Gv~~~~lF~t~DL~e~kn~~~V~~cL~aL~~~a~~ 123 (144)
T 1ujo_A 89 GVIKTDMFQTVDLYEGKDMAAVQRTLMALGSLAVT 123 (144)
T ss_dssp TCCSSSCCCHHHHHTCSCHHHHHHHHHHHHHHHHH
T ss_pred CcCccccCChhHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 9986 35677888876211 12345556555443
No 22
>1wyr_A RHO guanine nucleotide exchange factor 6; CH domain, all-alpha, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=98.13 E-value=3.7e-06 Score=68.24 Aligned_cols=82 Identities=26% Similarity=0.443 Sum_probs=67.6
Q ss_pred CHHHHHHHhHhhhcCCc-------c-h--hhhcCCchhhhhhhhhhCCCCcccccccccCCChHHHHHHHHHHHHHHHhc
Q 024284 15 GRNELLTWINNRLQLHL-------S-R--IEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNKL 84 (269)
Q Consensus 15 sR~eLL~WiN~~L~~~~-------~-k--IEel~sGaayCQlmd~l~Pg~v~l~kVkf~a~~e~e~~~N~KiLQ~af~k~ 84 (269)
-+.|+..|||+++.++. + . .+.|.+|++-|+|++.+.||+|+ ||+-.+...+.+..|...+-++.+++
T Consensus 7 ~e~e~~~WI~~~~~l~~~~~~~~~~~~~l~~~L~dGvvLCkL~N~l~Pg~i~--ki~~~~~~~f~~~eNI~~FL~a~~~~ 84 (121)
T 1wyr_A 7 GEEQIVTWLISLGVLESPKKTICDPEEFLKSSLKNGVVLCKLINRLMPGSVE--KFCLDPQTEADCINNINDFLKGCATL 84 (121)
T ss_dssp SHHHHHHHHHHHTSSCCCSSCCSCHHHHHHHHHHHSHHHHHHHHHHSTTCCS--CCCSSCCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCcCCcccCCCCcHHHHHHHHccHHHHHHHHHHhCCCCCC--cCCCCCcchHHHHHHHHHHHHHHHHc
Confidence 36799999999965443 1 1 38899999999999999999998 77656677899999999999999999
Q ss_pred CccccccccccccCC
Q 024284 85 KIEKHIEVNKLVKGR 99 (269)
Q Consensus 85 ~I~k~ipV~kLiKgk 99 (269)
|++ .+....|..||
T Consensus 85 g~~-~F~~~DL~e~k 98 (121)
T 1wyr_A 85 QVE-IFDPDDLYSGV 98 (121)
T ss_dssp TCC-CCCHHHHHTCS
T ss_pred CCC-ccCHHHHHcCC
Confidence 984 57777777775
No 23
>2ee7_A Sperm flagellar protein 1; all alpha protein, CH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.12 E-value=1e-05 Score=66.71 Aligned_cols=113 Identities=18% Similarity=0.297 Sum_probs=89.6
Q ss_pred CcccccccCCCccCHHHHHHHhHhhhcCCcch--h-hhcCCchhhhhhhhhhCCCCcccccccccCCChHHHHHHHHHHH
Q 024284 2 ATNIGMMDSAYFVGRNELLTWINNRLQLHLSR--I-EEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQ 78 (269)
Q Consensus 2 ~~~~gmm~~~~~~sR~eLL~WiN~~L~~~~~k--I-Eel~sGaayCQlmd~l~Pg~v~l~kVkf~a~~e~e~~~N~KiLQ 78 (269)
+.+-||-..-.---++||+.||+ .+.+++.+ + .++++|...-.|+...||..|+|+.-. ++..-.-.+.||.+|.
T Consensus 3 ~~~~~~~~~l~~ee~~el~~WL~-~l~Ls~~~rn~rRDFSdG~lvAEIl~~y~Pk~Vdlh~y~-~~~S~~~K~~NW~~ln 80 (127)
T 2ee7_A 3 SGSSGMASSVDEEALHQLYLWVD-NIPLSRPKRNLSRDFSDGVLVAEVIKFYFPKMVEMHNYV-PANSLQQKLSNWGHLN 80 (127)
T ss_dssp CCCCSCCSSCCHHHHHHHHHHHH-HSCCSCCSSCHHHHHTTSHHHHHHHHHHCTTTCCCSSCC-CCSSHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHH-cCCCCCCCCchhhhccchhHHHHHHHHHCcCcccccccC-CCCcHHHHHHhHHHHH
Confidence 34677775555556899999999 58887752 3 579999999999999999999997632 4556677999999995
Q ss_pred -HHHHhcCcccc-ccccccccCCCcchHHHHHHHHHHHhh
Q 024284 79 -DVFNKLKIEKH-IEVNKLVKGRPLDNLEFLQWLKRYCDS 116 (269)
Q Consensus 79 -~af~k~~I~k~-ipV~kLiKgk~qdNlEFlQWfk~f~d~ 116 (269)
.+|+|+|+..+ -.|+.++.|+...=-.+|.=++.+...
T Consensus 81 ~kvl~kl~~~l~~~~i~~i~~~~~Gaie~lL~~L~~~l~~ 120 (127)
T 2ee7_A 81 RKVLKRLNFSVPDDVMRKIAQCAPGVVELVLIPLRQRLEE 120 (127)
T ss_dssp HHTTGGGTCCCCHHHHHHHHTTCTTTTHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 89999999754 458999999988777788877777654
No 24
>1p2x_A RNG2 protein, RAS GTPase-activating-like protein; helices, bundle, protein binding; 2.21A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=98.10 E-value=5.2e-06 Score=70.20 Aligned_cols=85 Identities=15% Similarity=0.316 Sum_probs=70.8
Q ss_pred ccCHHHHHHHhHhhhcCCcch----hhhcCCchhhhhhhhhhCCCCcccccccccCCChHHHHHHHHHHHHHHHhcCccc
Q 024284 13 FVGRNELLTWINNRLQLHLSR----IEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEK 88 (269)
Q Consensus 13 ~~sR~eLL~WiN~~L~~~~~k----IEel~sGaayCQlmd~l~Pg~v~l~kVkf~a~~e~e~~~N~KiLQ~af~k~~I~k 88 (269)
..-+.|+..||+..|+.++.. .+.|.+|++-|+|++.|.||+| +||+-.++..+.+..|...+-.+.+++||+.
T Consensus 10 l~~~~e~~~WIe~~l~~~l~~~~~l~~~LkdGvvLCkL~N~l~P~~i--~kI~~~~~~~f~~~eNI~~FL~a~~~~Gv~~ 87 (159)
T 1p2x_A 10 LCRVDEAKKWIEECLGTDLGPTSTFEQSLRNGVVLALLVQKFQPDKL--IKIFYSNELQFRHSDNINKFLDFIHGIGLPE 87 (159)
T ss_dssp HHHHHHHHHHHHHHHTSCCCCGGGHHHHTTTSHHHHHHHHHHCTTSC--CCCCCCSSCCTTHHHHHHHHHHHHHHTTCCG
T ss_pred HHHHHHHHHHHHHHhCCCCCChHHHHHHHcchHHHHHHHHHhCCCCc--cccccccCCcchHHHHHHHHHHHHHHcCCCc
Confidence 334589999999999988863 5679999999999999999987 4665445778899999999999999999986
Q ss_pred c--ccccccccCC
Q 024284 89 H--IEVNKLVKGR 99 (269)
Q Consensus 89 ~--ipV~kLiKgk 99 (269)
. +....|..|+
T Consensus 88 ~~lF~~~DL~e~k 100 (159)
T 1p2x_A 88 IFHFELTDIYEGK 100 (159)
T ss_dssp GGCCCHHHHSSCS
T ss_pred ccccCHHHHHhcC
Confidence 3 4677888886
No 25
>2l3g_A RHO guanine nucleotide exchange factor 7; structural genomics, northeast structural genomics consortiu PSI-biology, calponin-homology domain; NMR {Homo sapiens}
Probab=98.06 E-value=7.3e-06 Score=67.10 Aligned_cols=81 Identities=22% Similarity=0.468 Sum_probs=65.8
Q ss_pred HHHHHHHhHhhhcCC-----c-c--h-h-hhcCCchhhhhhhhhhCCCCcccccccccCCChHHHHHHHHHHHHHHHh-c
Q 024284 16 RNELLTWINNRLQLH-----L-S--R-I-EEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNK-L 84 (269)
Q Consensus 16 R~eLL~WiN~~L~~~-----~-~--k-I-Eel~sGaayCQlmd~l~Pg~v~l~kVkf~a~~e~e~~~N~KiLQ~af~k-~ 84 (269)
+.|+..||++++.+. . . . + |-|.+|++-|+|++.+.||+|+ ||+-.+...+.+..|...+.++.++ .
T Consensus 14 ~~e~~~WI~~~~~L~~~~~~~~~~~~~l~~~LkdGvvLCkLiN~l~Pg~i~--kI~~~~~~~f~~~eNI~~FL~a~~~~~ 91 (126)
T 2l3g_A 14 AEQTVTWLITLGVLESPKKTISDPEGFLQASLKDGVVLCRLLERLLPGTIE--KVYPEPRSESECLSNIREFLRGCGASL 91 (126)
T ss_dssp HHHHHHHHHHTTSSCCCSSCCSCHHHHHHHHHTTSHHHHHHHHHHSTTCCS--CCCSSCCSHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHhCccccCCCCCChhhHHHHHHccHHHHHHHHHHhCCCCCC--ccCCCCCcchHHHHHHHHHHHHHHHhC
Confidence 689999999985421 1 1 2 3 8899999999999999999998 6765566789999999999999999 9
Q ss_pred CccccccccccccCC
Q 024284 85 KIEKHIEVNKLVKGR 99 (269)
Q Consensus 85 ~I~k~ipV~kLiKgk 99 (269)
|++ .+....|..||
T Consensus 92 g~~-lF~t~DL~e~k 105 (126)
T 2l3g_A 92 RLE-TFDANDLYQGQ 105 (126)
T ss_dssp CCC-CCCHHHHHTTS
T ss_pred CCC-ccCHHHHHhCC
Confidence 984 46777777775
No 26
>1wku_A Alpha-actinin 3; calponin homology domain, actin binding domain, contractIle protein; 1.60A {Homo sapiens} PDB: 1tjt_A 2r0o_A 2eyi_A 2eyn_A 3lue_K
Probab=98.05 E-value=1e-05 Score=72.55 Aligned_cols=96 Identities=17% Similarity=0.323 Sum_probs=73.6
Q ss_pred CHHHHHHHhHhhhcCCcc--hh----hhcCCchhhhhhhhhhCCCCcccccccccCCChHHHHHHHHHHHHHHHh-cCcc
Q 024284 15 GRNELLTWINNRLQLHLS--RI----EEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNK-LKIE 87 (269)
Q Consensus 15 sR~eLL~WiN~~L~~~~~--kI----Eel~sGaayCQlmd~l~Pg~v~l~kVkf~a~~e~e~~~N~KiLQ~af~k-~~I~ 87 (269)
.+..||.|+|..+. .|+ .| .+.++|.|||.|++.+.|+.|++..+. +.+-.+|.+..-++..+ +||+
T Consensus 141 ~~~~LL~W~~~~~~-~y~~v~v~nFs~s~~DG~a~~aLi~~~~P~~id~~~l~-----~~~~~~n~~~a~~~A~~~lGi~ 214 (254)
T 1wku_A 141 AKEGLLLWCQRKTA-PYRNVNVQNFHTSWKDGLALCALIHRHRPDLIDYAKLR-----KDDPIGNLNTAFEVAEKYLDIP 214 (254)
T ss_dssp HHHHHHHHHHHHHT-TCTTCCCCSSSGGGTTSHHHHHHHHHHCTTSCCGGGCC-----TTCHHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHcc-CCCCCcCCCCccchhhHHHHHHHHHHHCCCcccccccC-----cCCHHHHHHHHHHHHHHHcCCC
Confidence 46779999998774 222 12 357999999999999999998866653 35678898887777765 9999
Q ss_pred ccccccccccCCC---cchHHHHHHHHHHHhh
Q 024284 88 KHIEVNKLVKGRP---LDNLEFLQWLKRYCDS 116 (269)
Q Consensus 88 k~ipV~kLiKgk~---qdNlEFlQWfk~f~d~ 116 (269)
+.++.+.++.|.. .-++.|+..|+..|..
T Consensus 215 ~~l~peDiv~~~~pD~k~imtyva~l~~~~~~ 246 (254)
T 1wku_A 215 KMLDAEDIVNTPKPDEKAIMTYVSCFYHAFAG 246 (254)
T ss_dssp CCSCHHHHHHSSSCCHHHHHHHHHHHHHHHHH
T ss_pred CcCCHHHHhccCCCcHHHHHHHHHHHHHHhhc
Confidence 9999999988853 4567777777776654
No 27
>1p5s_A RAS GTPase-activating-like protein RNG2; alpha-helical bundle, cytokine; 2.22A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=98.05 E-value=5.4e-06 Score=72.90 Aligned_cols=83 Identities=16% Similarity=0.316 Sum_probs=70.1
Q ss_pred CHHHHHHHhHhhhcCCcch----hhhcCCchhhhhhhhhhCCCCcccccccccCCChHHHHHHHHHHHHHHHhcCcccc-
Q 024284 15 GRNELLTWINNRLQLHLSR----IEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKH- 89 (269)
Q Consensus 15 sR~eLL~WiN~~L~~~~~k----IEel~sGaayCQlmd~l~Pg~v~l~kVkf~a~~e~e~~~N~KiLQ~af~k~~I~k~- 89 (269)
-+.|+..||+++|+.++.. .|.|.+|++-|+|++.|.||+| +||+-.++..+.+..|...+-++.+++||+..
T Consensus 56 ~~~e~~~WIe~~l~~~l~~~~~f~~~LrDGvvLCkLiN~l~P~sv--~kI~~~s~~~f~~~eNI~~FL~ac~~~Gvp~~~ 133 (203)
T 1p5s_A 56 RVDEAKKWIEECLGTDLGPTSTFEQSLRNGVVLALLVQKFQPDKL--IKIFYSNELQFRHSDNINKFLDFIHGIGLPEIF 133 (203)
T ss_dssp HHHHHHHHHHHHHTSCCCCGGGHHHHHTTSHHHHHHHHHHCTTSC--CCCCCCSSSCCCHHHHHHHHHHHHHHTTCCGGG
T ss_pred HHHHHHHHHHHHhCCCCCChHHHHHHHcchHHHHHHHHHhCCCCc--ccccCCCCCcchHHHHHHHHHHHHHHcCCCccc
Confidence 3589999999999888753 5669999999999999999998 56644566778899999999999999999874
Q ss_pred -ccccccccCC
Q 024284 90 -IEVNKLVKGR 99 (269)
Q Consensus 90 -ipV~kLiKgk 99 (269)
+....|..++
T Consensus 134 lF~t~DL~e~k 144 (203)
T 1p5s_A 134 HFELTDIYEGK 144 (203)
T ss_dssp CCCHHHHHSCS
T ss_pred ccCHHHHHhcC
Confidence 5777888886
No 28
>1wyn_A Calponin-2; CH domain, F-actin binding, all alpha helix, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=98.04 E-value=7.8e-06 Score=68.30 Aligned_cols=87 Identities=23% Similarity=0.415 Sum_probs=70.9
Q ss_pred CCCccC-HHHHHHHhHhhhcCCcc--hhhhcCCchhhhhhhhhhCCCCcccccccccCCChHHHHHHHHHHHHHHHhcCc
Q 024284 10 SAYFVG-RNELLTWINNRLQLHLS--RIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKI 86 (269)
Q Consensus 10 ~~~~~s-R~eLL~WiN~~L~~~~~--kIEel~sGaayCQlmd~l~Pg~v~l~kVkf~a~~e~e~~~N~KiLQ~af~k~~I 86 (269)
..|.-- ..|+..||+.+|+.++. =.+.|.+|++-|+|++.|.||+|+ |++ .+...+.+..|...+-++.+++|+
T Consensus 12 ~ky~~~~~~e~~~WIe~~l~~~i~~~l~~~L~DGvvLCkL~N~l~P~~v~--kin-~~~~~f~~~eNI~~FL~a~~~~Gv 88 (146)
T 1wyn_A 12 SKYDPQKEAELRTWIEGLTGLSIGPDFQKGLKDGTILCTLMNKLQPGSVP--KIN-RSMQNWHQLENLSNFIKAMVSYGM 88 (146)
T ss_dssp SCCCTTHHHHHHHHHHHHHCCCCCSCHHHHHHTTSHHHHHHHHHCTTSCS--CCC-CSSCHHHHHHHHHHHHHHHHHHTC
T ss_pred ccCCHHHHHHHHHHHHHHhCCCCcHHHHHHHccHHHHHHHHHHhCCCCcc--ccc-cccccccHHHHHHHHHHHHHHcCC
Confidence 344444 38999999999988764 267799999999999999999985 564 456788899999999999999999
Q ss_pred ccc--ccccccccCC
Q 024284 87 EKH--IEVNKLVKGR 99 (269)
Q Consensus 87 ~k~--ipV~kLiKgk 99 (269)
+.. +....|..|+
T Consensus 89 ~~~~lF~~~DL~e~k 103 (146)
T 1wyn_A 89 NPVDLFEANDLFESG 103 (146)
T ss_dssp CSSSCCCHHHHHTCS
T ss_pred CcccccChhHHHhcC
Confidence 863 6677788776
No 29
>1wyp_A Calponin 1; CH domain, F-actin binding, all-alpha, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=98.02 E-value=9.2e-06 Score=67.05 Aligned_cols=81 Identities=21% Similarity=0.481 Sum_probs=68.1
Q ss_pred HHHHHHHhHhhhcCCcch--hhhcCCchhhhhhhhhhCCCCcccccccccCCChHHHHHHHHHHHHHHHhcCcccc--cc
Q 024284 16 RNELLTWINNRLQLHLSR--IEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKH--IE 91 (269)
Q Consensus 16 R~eLL~WiN~~L~~~~~k--IEel~sGaayCQlmd~l~Pg~v~l~kVkf~a~~e~e~~~N~KiLQ~af~k~~I~k~--ip 91 (269)
..|+..|||..|+.++.. .+.|.+|++-|+|++.|.||+|+ ||+ .+...+....|...+-++.+++|++.. +.
T Consensus 19 ~~e~~~WIe~~l~~~~~~~l~~~L~DGvvLCkL~N~l~P~~v~--ki~-~~~~~f~~~eNI~~Fl~a~~~~Gv~~~~lF~ 95 (136)
T 1wyp_A 19 EQELREWIEGVTGRRIGNNFMDGLKDGIILCEFINKLQPGSVK--KIN-ESTQNWHQLENIGNFIKAITKYGVKPHDIFE 95 (136)
T ss_dssp HHHHHHHHHHHTCCCCCSCTTHHHHTSHHHHHHHHHHSTTSSS--CCC-CSSCSHHHHHHHHHHHHHHHHHTCCGGGCCC
T ss_pred HHHHHHHHHHHhCCCCcHHHHHHHccHHhHHHHHHhhCCCCcc--ccc-ccccchHHHHHHHHHHHHHHHcCCCcccccC
Confidence 479999999999887642 57799999999999999999985 664 456778899999999999999999864 66
Q ss_pred ccccccCC
Q 024284 92 VNKLVKGR 99 (269)
Q Consensus 92 V~kLiKgk 99 (269)
...|..|+
T Consensus 96 ~~DL~e~k 103 (136)
T 1wyp_A 96 ANDLFENT 103 (136)
T ss_dssp HHHHHSCS
T ss_pred chHHhcCC
Confidence 77788776
No 30
>1dxx_A Dystrophin; structural protein, muscular dystrophy, calponin homology domain, actin-binding, utrophin; 2.6A {Homo sapiens} SCOP: a.40.1.1 a.40.1.1 PDB: 1qag_A
Probab=98.02 E-value=3.4e-06 Score=75.08 Aligned_cols=96 Identities=15% Similarity=0.223 Sum_probs=69.9
Q ss_pred CHHHHHHHhHhhhcC----Ccchh-hhcCCchhhhhhhhhhCCCCcccccccccCCChHHHHHHHHHHHHHH-HhcCccc
Q 024284 15 GRNELLTWINNRLQL----HLSRI-EEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVF-NKLKIEK 88 (269)
Q Consensus 15 sR~eLL~WiN~~L~~----~~~kI-Eel~sGaayCQlmd~l~Pg~v~l~kVkf~a~~e~e~~~N~KiLQ~af-~k~~I~k 88 (269)
.+..||.|+|..+.. +++.. .+..+|.|||.|+|.+.|+.++...+. .+.+-.+|.+..-+.- +++||++
T Consensus 136 ~~~~LL~W~~~~~~~~~~~~i~nFs~s~~DG~a~~aLi~~~~P~li~~~~~~----~~~~~~~n~~~a~~~A~~~lGi~~ 211 (246)
T 1dxx_A 136 SEKILLSWVRQSTRNYPQVNVINFTTSWSDGLALNALIHSHRPDLFDWNSVV----SQQSATQRLEHAFNIARYQLGIEK 211 (246)
T ss_dssp HHHHHHHHHHHHHTTCTTCCCCSSSGGGTTSHHHHHHHHHHCGGGSCHHHHH----TCCCHHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHhccCCCCCcCCCcccchhHHHHHHHHHHHCcCccchhhhc----ccCCHHHHHHHHHHHHHHhCCCCc
Confidence 567899999988752 22221 457899999999999999999877653 1123356666544444 4899999
Q ss_pred cccccccccCCC--cchHHHHHHHHHHH
Q 024284 89 HIEVNKLVKGRP--LDNLEFLQWLKRYC 114 (269)
Q Consensus 89 ~ipV~kLiKgk~--qdNlEFlQWfk~f~ 114 (269)
.++.+.++.++. .-++.|+..++.+|
T Consensus 212 ~l~peDi~~~~pD~k~i~tyva~l~~~~ 239 (246)
T 1dxx_A 212 LLDPEDVDTTYPDKKSILMYITSLFQVL 239 (246)
T ss_dssp CCCHHHHSSSSCCHHHHHHHHHHHHTTS
T ss_pred cCCHHHhhcCCCcHHHHHHHHHHHHHHc
Confidence 999999999987 66777776665443
No 31
>1wym_A Transgelin-2; CH domain, F-actin binding, all helix, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens}
Probab=97.99 E-value=1.1e-05 Score=68.05 Aligned_cols=81 Identities=17% Similarity=0.427 Sum_probs=68.9
Q ss_pred HHHHHHHhHhhhcCCcch--------hhhcCCchhhhhhhhhhCC---CCcccccccccCCChHHHHHHHHHHHHHHHhc
Q 024284 16 RNELLTWINNRLQLHLSR--------IEEAASGAVQCQMLDMTYP---GVVPMHKVNFDAKTEYDMIQNYKVLQDVFNKL 84 (269)
Q Consensus 16 R~eLL~WiN~~L~~~~~k--------IEel~sGaayCQlmd~l~P---g~v~l~kVkf~a~~e~e~~~N~KiLQ~af~k~ 84 (269)
..|+..||+..|+.++.. .+.|.+|++-|+|++.|.| |+|+ ||+ .++..+.+..|...+-.+.+++
T Consensus 19 e~e~~~WIe~~l~~~l~~~~~~~~~~~~~LkDGvvLCkL~N~l~P~~~~~i~--kIn-~~~~~F~~~eNI~~FL~ac~~~ 95 (155)
T 1wym_A 19 EQILIQWITTQCRKDVGRPQPGRENFQNWLKDGTVLCELINALYPEGQAPVK--KIQ-ASTMAFKQMEQISQFLQAAERY 95 (155)
T ss_dssp HHHHHHHHHHHSSSCCCCCCSSHHHHHHHHHTSHHHHHHHHHHSCTTTCSCC--CCC-CCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCcccHHHHHHHHcchHHHHHHHHHhccccCCCcC--ccc-CCCccccHHHHHHHHHHHHHHc
Confidence 459999999999988752 4669999999999999999 9988 664 4568899999999999999999
Q ss_pred Ccccc--ccccccccCC
Q 024284 85 KIEKH--IEVNKLVKGR 99 (269)
Q Consensus 85 ~I~k~--ipV~kLiKgk 99 (269)
||+.. +....|..|+
T Consensus 96 Gv~~~~lF~t~DL~e~k 112 (155)
T 1wym_A 96 GINTTDIFQTVDLWEGK 112 (155)
T ss_dssp TCCTTTCCCHHHHHTCS
T ss_pred CCCccccCChHHHHhcC
Confidence 99863 5677888886
No 32
>1aoa_A T-fimbrin; actin-binding protein, calcium-binding, phosphorylation; 2.40A {Homo sapiens} SCOP: a.40.1.1 a.40.1.1
Probab=97.96 E-value=1.1e-05 Score=72.88 Aligned_cols=95 Identities=21% Similarity=0.305 Sum_probs=74.4
Q ss_pred HHHHHHHhHhhhc-CCcchhh----hcCCchhhhhhhhhhCCCCcccc----cccccCCChHHHHHHHHHHHHHHHhcCc
Q 024284 16 RNELLTWINNRLQ-LHLSRIE----EAASGAVQCQMLDMTYPGVVPMH----KVNFDAKTEYDMIQNYKVLQDVFNKLKI 86 (269)
Q Consensus 16 R~eLL~WiN~~L~-~~~~kIE----el~sGaayCQlmd~l~Pg~v~l~----kVkf~a~~e~e~~~N~KiLQ~af~k~~I 86 (269)
+..||.|+|..|. ..+.+|. +..+|.|||-|++.+.|+.+|.. -+.|.+-.+.+.++|.+..-++-+++||
T Consensus 170 ~~~LL~W~n~~l~~~g~~~I~nF~~s~~DG~a~~aLi~~~~P~~~~~~~~~l~~~~~~~~~~~~~~n~~~a~~~A~~lGi 249 (275)
T 1aoa_A 170 EELLLRWANFHLENSGWQKINNFSADIKDSKAYFHLLNQIAPKGQKEGEPRIDINMSGFNETDDLKRAESMLQQADKLGC 249 (275)
T ss_dssp HHHHHHHHHHHHHHTTCCCCSCSSTTTTTSHHHHHHHHHHSCCSCSSSCCCCCCCCTTTTCSSHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHhcCCCcchhhhhhhhhhHHHHHHHHHHCCCccccccccccccccCCCccCHHHHHHHHHHHHHHcCC
Confidence 5669999999874 2232233 46789999999999999977653 2466766777889999988888889999
Q ss_pred cccccccccccCCCcchHHHHHHH
Q 024284 87 EKHIEVNKLVKGRPLDNLEFLQWL 110 (269)
Q Consensus 87 ~k~ipV~kLiKgk~qdNlEFlQWf 110 (269)
++.+..+.++.++..-++-|+.-+
T Consensus 250 ~~~l~peDi~~~~~k~i~tyva~L 273 (275)
T 1aoa_A 250 RQFVTPADVVSGNPKLNLAFVANL 273 (275)
T ss_dssp CCSCCHHHHHTTCHHHHHHHHHHH
T ss_pred CCcCCHHHcCCCChhHHHHHHHHH
Confidence 999999999999876666665443
No 33
>2vzc_A Alpha-parvin; membrane, cytoplasm, cytoskeleton, cell junction, alternative splicing, calponin homology domain, actin-binding, cell membrane; 1.05A {Homo sapiens} PDB: 2vzd_A* 2vzg_B* 2vzi_B* 2k2r_A 3kmu_B 3kmw_B* 3rep_B*
Probab=97.93 E-value=2.6e-05 Score=63.94 Aligned_cols=92 Identities=17% Similarity=0.283 Sum_probs=79.1
Q ss_pred HHHHHHHhHhhh---cCCcchh-hhcCCchhhhhhhhhhCCCCcccccccccCCChHHHHHHHHHHHHHHHhcCccc-cc
Q 024284 16 RNELLTWINNRL---QLHLSRI-EEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEK-HI 90 (269)
Q Consensus 16 R~eLL~WiN~~L---~~~~~kI-Eel~sGaayCQlmd~l~Pg~v~l~kVkf~a~~e~e~~~N~KiLQ~af~k~~I~k-~i 90 (269)
++.+..|||..| +..++.+ ++|++|...|++++.|-|+.+|+++++-.+++....++|..+.=+.+++.||.. .|
T Consensus 24 ~ktft~WiN~~L~~~~~~v~dL~~Dl~DGv~L~~Lle~ls~~~~~~~~~~~~p~~r~~kieNv~~aL~~lk~~gi~l~~I 103 (131)
T 2vzc_A 24 KKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPLHSFFLTPDSFEQKVLNVSFAFELMQDGGLEKPKP 103 (131)
T ss_dssp HHHHHHHHHHHHGGGTCCCCCTTTTTTTSHHHHHHHHHHTTCCCCTTSSCSSCCSHHHHHHHHHHHHHHHHHTTCCCCSS
T ss_pred HHHHHHHHHHHHHHcCCcccCHHHHcccHHHHHHHHHHhcCCCCCHHHhcCCCCcHHHHHHHHHHHHHHHHHcCCCcCCC
Confidence 455899999976 3445554 589999999999999999999999988889999999999999999999999984 68
Q ss_pred cccccccCCCcchHHHH
Q 024284 91 EVNKLVKGRPLDNLEFL 107 (269)
Q Consensus 91 pV~kLiKgk~qdNlEFl 107 (269)
.-+.++.|+.--.|-++
T Consensus 104 ~~~DIvdGn~kliLgLi 120 (131)
T 2vzc_A 104 RPEDIVNCDLKSTLRVL 120 (131)
T ss_dssp CHHHHHTTCHHHHHHHH
T ss_pred CHHHhhCCCHHhHHHHH
Confidence 88899999877677766
No 34
>2wa7_A Filamin-B; disease mutation, skeletal dysplasia, structural protein, actin-crosslinking, myogenesis, cytoskeleton; 1.85A {Homo sapiens} PDB: 2wa5_A 2wa6_A 3fer_A
Probab=97.89 E-value=3.1e-05 Score=68.93 Aligned_cols=94 Identities=16% Similarity=0.380 Sum_probs=71.3
Q ss_pred CHHHHHHHhHhhhc----CCcchhhhcCCchhhhhhhhhhCCCCcccccccccCCChHHHHHHHHHHHHHHHh-cCcccc
Q 024284 15 GRNELLTWINNRLQ----LHLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNK-LKIEKH 89 (269)
Q Consensus 15 sR~eLL~WiN~~L~----~~~~kIEel~sGaayCQlmd~l~Pg~v~l~kVkf~a~~e~e~~~N~KiLQ~af~k-~~I~k~ 89 (269)
.+..||.|+|..+. .|++. +..+|.|||-|+|.+.|+.+| .|..-.+.+-.+|.+..-+.-.+ +||++.
T Consensus 144 ~~~~LL~W~~~~~~~~~v~nFs~--s~~dG~a~~aLi~~~~P~~i~----~~~~l~~~~~~~n~~~a~~~A~~~lGi~~~ 217 (245)
T 2wa7_A 144 PKQRLLGWIQNKIPYLPITNFNQ--NWQDGKALGALVDSCAPGLCP----DWESWDPQKPVDNAREAVQQADDWLGVPQV 217 (245)
T ss_dssp HHHHHHHHHHHHSTTSCCCCSSG--GGTTSHHHHHHHHHHSTTSST----TGGGSCTTCHHHHHHHHHHHHHHHSCCCCS
T ss_pred HHHHHHHHHHHhCCCCCCCCCcc--cchhhHHHHHHHHHHCccccc----cccccCcccHHHHHHHHHHHHHHhCCCCcc
Confidence 47899999999875 24443 689999999999999999873 23333455678888887776676 999999
Q ss_pred ccccccccCCCcchHHHHHHHHHHHh
Q 024284 90 IEVNKLVKGRPLDNLEFLQWLKRYCD 115 (269)
Q Consensus 90 ipV~kLiKgk~qdNlEFlQWfk~f~d 115 (269)
++.+.++.|+. |-.-.+-.+-.||.
T Consensus 218 l~peDi~~~~~-d~ksi~tyvs~~~~ 242 (245)
T 2wa7_A 218 ITPEEIIHPDV-DEHSVMTYLSQFPK 242 (245)
T ss_dssp SCHHHHTCTTC-CHHHHHHHHTHHHH
T ss_pred CCHHHhccCCC-cHHHHHHHHHHHhc
Confidence 99999999764 55556655555554
No 35
>1pxy_A Fimbrin-like protein; calponin homology, F-actin-binding domain (ABD), F-actin- crosslinking, structural genomics; 2.40A {Arabidopsis thaliana} SCOP: a.40.1.1 PDB: 3byh_B
Probab=97.87 E-value=2.1e-05 Score=76.67 Aligned_cols=100 Identities=18% Similarity=0.205 Sum_probs=76.9
Q ss_pred ccCHHHHHHHhHhhhc-----CCcchhh--hcCCchhhhhhhhhhCCCCcccccccccCCChHHHHHHHHHHHHHHHhcC
Q 024284 13 FVGRNELLTWINNRLQ-----LHLSRIE--EAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLK 85 (269)
Q Consensus 13 ~~sR~eLL~WiN~~L~-----~~~~kIE--el~sGaayCQlmd~l~Pg~v~l~kVkf~a~~e~e~~~N~KiLQ~af~k~~ 85 (269)
.++...||.|+|..+. .+++... ...+|.|+|-|+|.+.|+.|+++.+.-. .++.+..+|.+..-++.+++|
T Consensus 396 ~~~~~~LL~W~~~~~~~~~~~~~i~nF~d~s~~dG~a~~aLi~~~~P~li~~~~l~~~-~s~~~~~~N~~~a~~~a~~lG 474 (506)
T 1pxy_A 396 EMTDADILSWANRKVRTMGRKLQIESFKDKSLSSGLFFLNLLWAVEPRVVNWNLVTKG-ETDDEKRLNATYIVSVARKLG 474 (506)
T ss_dssp CCCHHHHHHHHHHHHHTTTCCCCCSSTTCGGGGGCHHHHHHHHHHCGGGCCTTSCCCS-CSHHHHHHHHHHHHHHHHHHT
T ss_pred cccHHHHHHHHHHHhhhcCCccccCCCCcccccchHHHHHHHHhhCCCeeehhhcccC-CCchhHHHHHHHHHHHHHHcC
Confidence 3578899999999885 3555554 7889999999999999999988776532 356688999998766668999
Q ss_pred ccccccccccccCCCcchHHHHHHHHHH
Q 024284 86 IEKHIEVNKLVKGRPLDNLEFLQWLKRY 113 (269)
Q Consensus 86 I~k~ipV~kLiKgk~qdNlEFlQWfk~f 113 (269)
|++.++.+.++.++-.-.+-++.-|+.+
T Consensus 475 i~~~l~peDi~~~d~ksi~tyv~~l~~~ 502 (506)
T 1pxy_A 475 CSVFLLPEDIVEVNQKMILILTASIMYW 502 (506)
T ss_dssp CCCCCCHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCCcCCHHHccCCChhHHHHHHHHHHHH
Confidence 9999999999988544444444444333
No 36
>1rt8_A Fimbrin; filamentous actin binding domain (ABD), calponin homology, actin-crosslinking, structural protein; 2.00A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=97.83 E-value=2.6e-05 Score=76.19 Aligned_cols=92 Identities=20% Similarity=0.204 Sum_probs=73.5
Q ss_pred ccCHHHHHHHhHhhhc-----CCcchhh--hcCCchhhhhhhhhhCCCCcccccccccCCChHHHHHHHHHHHHHHHhcC
Q 024284 13 FVGRNELLTWINNRLQ-----LHLSRIE--EAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLK 85 (269)
Q Consensus 13 ~~sR~eLL~WiN~~L~-----~~~~kIE--el~sGaayCQlmd~l~Pg~v~l~kVkf~a~~e~e~~~N~KiLQ~af~k~~ 85 (269)
-++..+||.|+|..+. .+++... ...+|-|+|-|+|.+.|+.|+...|.- ..++.+-.+|.+..-++-+++|
T Consensus 407 ~~~~~~LL~W~~~~~~~~~~~~~i~nF~~~s~~dG~a~~aLi~~~~P~~i~~~~l~~-~~~~~~~~~n~~~af~~A~~lG 485 (513)
T 1rt8_A 407 TLSDSDMVAWANSMAAKGGKGSQIRSFRDPSISTGVFVLDVLHGIKSEYVDYNLVTD-GSTEELAIQNARLAISIARKLG 485 (513)
T ss_dssp CCCHHHHHHHHHHHHTTTCSSCCCSSTTCGGGGGSHHHHHHHHHHCGGGCCGGGCCC-CCSHHHHHHHHHHHHHHHHHTT
T ss_pred cCCHHHHHHHHHHHhhccCCCCCCCCCCcccccchHHHHHHHHHhCCCcCCHHhhcc-ccChhhHHHHHHHHHHHHHHcC
Confidence 3567889999999886 3455554 578999999999999999998877542 2356788999998777779999
Q ss_pred ccccccccccccCCCcchHH
Q 024284 86 IEKHIEVNKLVKGRPLDNLE 105 (269)
Q Consensus 86 I~k~ipV~kLiKgk~qdNlE 105 (269)
|++.++.+.++.++..-.+.
T Consensus 486 i~~~l~peDi~~~~pksi~t 505 (513)
T 1rt8_A 486 AVIFILPEDIVAVRPRLVLH 505 (513)
T ss_dssp CCCCCCHHHHHTTCHHHHHH
T ss_pred CCccCCHHHhcCCCcccHHH
Confidence 99999999999998533333
No 37
>2rr8_A Iqgap1 protein; F-actin binding protein, protein binding; NMR {Homo sapiens}
Probab=97.83 E-value=1.5e-05 Score=69.30 Aligned_cols=101 Identities=15% Similarity=0.225 Sum_probs=76.1
Q ss_pred CHHHHHHHhHhhhcCCcch----hhhcCCchhhhhhhhhhCCCCccccccc------cc-CCChHHHHHHHHHHHHHHHh
Q 024284 15 GRNELLTWINNRLQLHLSR----IEEAASGAVQCQMLDMTYPGVVPMHKVN------FD-AKTEYDMIQNYKVLQDVFNK 83 (269)
Q Consensus 15 sR~eLL~WiN~~L~~~~~k----IEel~sGaayCQlmd~l~Pg~v~l~kVk------f~-a~~e~e~~~N~KiLQ~af~k 83 (269)
-+.|+..||+++|+.++.. .+-|.+|++-|+|++.|.||+||++||. ++ ++..+-+..|...+-.+.++
T Consensus 26 ~~~e~~~WIe~~lg~~lp~~~~f~~~LrDGvvLCkL~N~l~P~sv~~~kI~~~~~~~~~~~~~~f~~~eNI~~FL~ac~~ 105 (190)
T 2rr8_A 26 HLEEAKRWMEACLGEDLPPTTELEEGLRNGVYLAKLGNFFSPKVVSLKKIYDREQTRYKATGLHFRHTDNVIQWLNAMDE 105 (190)
T ss_dssp HHHHHHHHHHHHSCCCCCCHHHHHHHHSSHHHHHHHHHHSCTTTSCSSCSSTTTCHHHHHTCCCSSTHHHHHHHHHGGGG
T ss_pred HHHHHHHHHHHHhCCCCCChhHHHHHHcchhhHHHHHHHhCCCCcccccccccccccccCCCCcchHHHHHHHHHHHHHH
Confidence 3589999999999888753 4669999999999999999999998873 22 34567778999999999999
Q ss_pred cCccc--cccccccccCCCcc-hHHHHHHHHHHHh
Q 024284 84 LKIEK--HIEVNKLVKGRPLD-NLEFLQWLKRYCD 115 (269)
Q Consensus 84 ~~I~k--~ipV~kLiKgk~qd-NlEFlQWfk~f~d 115 (269)
+||+. .+....|..|+-.. =+.=|..+.++..
T Consensus 106 ~Gvp~~~lFet~DL~e~kn~~~Vi~cL~aL~~~a~ 140 (190)
T 2rr8_A 106 IGLPKIFYPETTDIYDRKNMPRCIYCIHALSLYLF 140 (190)
T ss_dssp TTCCSTTCCCHHHHTCTTCCHHHHHHHHHHHHHHH
T ss_pred cCCCccccCCHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 99986 34566777776221 2334555555543
No 38
>1pxy_A Fimbrin-like protein; calponin homology, F-actin-binding domain (ABD), F-actin- crosslinking, structural genomics; 2.40A {Arabidopsis thaliana} SCOP: a.40.1.1 PDB: 3byh_B
Probab=97.74 E-value=2.3e-05 Score=76.41 Aligned_cols=95 Identities=15% Similarity=0.265 Sum_probs=74.0
Q ss_pred CHHHHHHHhHhhhc-----CCcchh-hhcCCchhhhhhhhhhCCCCcccccccccCCChHHHHHHHHHHHHHHHhcCccc
Q 024284 15 GRNELLTWINNRLQ-----LHLSRI-EEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEK 88 (269)
Q Consensus 15 sR~eLL~WiN~~L~-----~~~~kI-Eel~sGaayCQlmd~l~Pg~v~l~kVkf~a~~e~e~~~N~KiLQ~af~k~~I~k 88 (269)
.+..||.|+|..|. .+++.. .+..+|.+||-|++.+.|+.+++..+. +.+..+|.+..-+.-+++||++
T Consensus 153 ~~~~LL~W~n~~l~~~g~~~~v~nFs~s~~DG~a~~~Ll~~~~P~~i~~~~l~-----~~~~~~n~~~a~~~a~~lGi~~ 227 (506)
T 1pxy_A 153 PEKVLLKWMNFHLKKGGYKKTVSNFSADLKDAQAYAFLLNVLAPEHCDPATLD-----AKDPLERAELVLSHAERMNCKR 227 (506)
T ss_dssp HHHHHHHHHHHHHHHTTCCSCCCCSSTTTTTSHHHHHHHHHHCGGGCCGGGGG-----CCSHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHhcCCCccCccccccccchHHHHHHHHHhCccccccccCC-----cCCHHHHHHHHHHHHHHcCCCC
Confidence 46789999998774 122222 468999999999999999998765443 4577899998888888999999
Q ss_pred cccccccccCCCcchHHHHHHHHHHH
Q 024284 89 HIEVNKLVKGRPLDNLEFLQWLKRYC 114 (269)
Q Consensus 89 ~ipV~kLiKgk~qdNlEFlQWfk~f~ 114 (269)
.+..+.++.|+..-++-|+.-++..|
T Consensus 228 ~l~peDi~~~~~k~v~tyva~l~~~~ 253 (506)
T 1pxy_A 228 YLTAEEIVEGSSTLNLAFVAQIFHER 253 (506)
T ss_dssp CCCHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred cCCHHHHhcCChhHHHHHHHHHhhhc
Confidence 99999999998766666665554444
No 39
>3f7p_A Plectin-1; plakin, hemidesmosome, cell adhesion, epidermolysis bullosa, actin-binding, alternative splicing, coiled coil, cytoplasm; 2.75A {Homo sapiens}
Probab=97.63 E-value=4e-05 Score=70.81 Aligned_cols=96 Identities=15% Similarity=0.278 Sum_probs=69.3
Q ss_pred cC-HHHHHHHhHhhhcC----Ccchh-hhcCCchhhhhhhhhhCCCCcccccccccCCChHHHHHHHHHHHHHH-HhcCc
Q 024284 14 VG-RNELLTWINNRLQL----HLSRI-EEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVF-NKLKI 86 (269)
Q Consensus 14 ~s-R~eLL~WiN~~L~~----~~~kI-Eel~sGaayCQlmd~l~Pg~v~l~kVkf~a~~e~e~~~N~KiLQ~af-~k~~I 86 (269)
+| +..||.|+|..+.. +++.+ .+..+|.|||-|++.+.|+.|++..+. +.+-.+|.+..-+.. +++||
T Consensus 188 ~s~k~~LL~W~n~~~~~y~~v~I~nFs~sw~DG~af~aLI~~~~P~lid~~~l~-----~~~~~~N~~~Af~~Ae~~LGi 262 (296)
T 3f7p_A 188 MTAKEKLLLWSQRMVEGYQGLRCDNFTSSWRDGRLFNAIIHRHKPLLIDMNKVY-----RQTNLENLDQAFSVAERDLGV 262 (296)
T ss_dssp SCHHHHHHHHHHHHTTTSTTCCCCCSSGGGTTSHHHHHHHHHHCGGGCCHHHHT-----TSCHHHHHHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHHHHhcCCCCCcCCCccccccccHHHHHHHHHHCcCccCHHHcC-----cccHHHHHHHHHHHHHHhCCC
Confidence 44 45599999998852 22221 678999999999999999999877764 224577988877777 58999
Q ss_pred cccccccccccCCCcchHHHHHHHHHHHh
Q 024284 87 EKHIEVNKLVKGRPLDNLEFLQWLKRYCD 115 (269)
Q Consensus 87 ~k~ipV~kLiKgk~qdNlEFlQWfk~f~d 115 (269)
++.++.+.++.++. |-.-.+-.+..||.
T Consensus 263 ~~ll~pEDi~~~~p-Deksimtyvs~ly~ 290 (296)
T 3f7p_A 263 TRLLDPEDVDVPQP-DEKSIITYVSSLYD 290 (296)
T ss_dssp CCCCCHHHHSSSSC-CHHHHHHHHHHHHH
T ss_pred CccCCHHHhcCCCC-cHHHHHHHHHHHHH
Confidence 99999999876653 34444444444444
No 40
>1aoa_A T-fimbrin; actin-binding protein, calcium-binding, phosphorylation; 2.40A {Homo sapiens} SCOP: a.40.1.1 a.40.1.1
Probab=97.62 E-value=0.00012 Score=66.11 Aligned_cols=92 Identities=20% Similarity=0.391 Sum_probs=74.9
Q ss_pred HHHHHHHhHhhhcCC------------cc-hhhhcCCchhhhhhhhhhCCCCcccccccccCCChHHHHHHHHHHHHHHH
Q 024284 16 RNELLTWINNRLQLH------------LS-RIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFN 82 (269)
Q Consensus 16 R~eLL~WiN~~L~~~------------~~-kIEel~sGaayCQlmd~l~Pg~v~l~kVkf~a~~e~e~~~N~KiLQ~af~ 82 (269)
.+++..|||..|..+ .. =.++|.+|..-|+|++.|.||+|+.++++-.+......++|....-++.+
T Consensus 26 ~~~f~~WiN~~L~~~~~~~~~~~i~~~v~dl~~dL~DGv~L~~Lle~l~~~~v~~~~i~~~~~~~~~~~eNv~~aL~~~k 105 (275)
T 1aoa_A 26 KYAFVNWINKALENDPDCRHVIPMNPNTDDLFKAVGDGIVLCKMINLSVPDTIDERAINKKKLTPFIIQENLNLALNSAS 105 (275)
T ss_dssp HHHHHHHHHHHTTTCTTSTTTCSCCTTTTHHHHHGGGSHHHHHHHHHHSTTSSCGGGSCCSSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCccccccCCCCCccchHHHHhccHHHHHHHHHHhcCCCCCccccCCCCCCHHHHHHHHHHHHHHHH
Confidence 588999999998642 22 24789999999999999999999988887555567889999999999999
Q ss_pred hcCccc-cccccccccCCCcchHHHH
Q 024284 83 KLKIEK-HIEVNKLVKGRPLDNLEFL 107 (269)
Q Consensus 83 k~~I~k-~ipV~kLiKgk~qdNlEFl 107 (269)
+.|+.. .|-.+.|+.|+..--|-++
T Consensus 106 ~~g~~l~~I~~~DIvdg~~~liLgLl 131 (275)
T 1aoa_A 106 AIGCHVVNIGAEDLRAGKPHLVLGLL 131 (275)
T ss_dssp HTTCCCTTCCHHHHHTTCHHHHHHHH
T ss_pred HcCCcccCCCHHHHHcCcHHHHHHHH
Confidence 999985 4777889999765555543
No 41
>1rt8_A Fimbrin; filamentous actin binding domain (ABD), calponin homology, actin-crosslinking, structural protein; 2.00A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=97.60 E-value=4.8e-05 Score=74.34 Aligned_cols=94 Identities=22% Similarity=0.321 Sum_probs=73.2
Q ss_pred HHHHHHHhHhhhcC-----Ccchh-hhcCCchhhhhhhhhhCCCCcccccccccCCChHHHHHHHHHHHHHHHhcCcccc
Q 024284 16 RNELLTWINNRLQL-----HLSRI-EEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKH 89 (269)
Q Consensus 16 R~eLL~WiN~~L~~-----~~~kI-Eel~sGaayCQlmd~l~Pg~v~l~kVkf~a~~e~e~~~N~KiLQ~af~k~~I~k~ 89 (269)
+..||.|+|..|.. +++.. .+..+|.+||-|++.+.|+.+++.. -.+.+..+|.+..-++.+++||++.
T Consensus 163 ~~~LL~W~n~~l~~~g~~~~V~nFs~s~~DG~a~~aLl~~~~P~~i~~~~-----l~~~~~~~n~~~a~~~a~~lgi~~~ 237 (513)
T 1rt8_A 163 EKILLRWFNYHLKAANWPRTVSNFSKDVSDGENYTVLLNQLAPELCSRAP-----LQTTDVLQRAEQVLQNAEKLDCRKY 237 (513)
T ss_dssp HHHHHHHHHHHHHHTTCSCCCSCSSGGGTTSHHHHHHHHHHCTTTCCSGG-----GGCCCHHHHHHHHHHHHHTTTCCCS
T ss_pred HHHHHHHHHHHHHhcCCCcCcccchhhhhccHHHHHHHHHHCccccccCC-----CCccCHHHHHHHHHHHHHHcCCCcc
Confidence 67899999987742 23322 3578899999999999999988543 3455678999999888999999999
Q ss_pred ccccccccCCCcchHHHHHHHHHHH
Q 024284 90 IEVNKLVKGRPLDNLEFLQWLKRYC 114 (269)
Q Consensus 90 ipV~kLiKgk~qdNlEFlQWfk~f~ 114 (269)
++.+.++.|+..-++-|+.=++..|
T Consensus 238 l~peDi~~~~~k~il~yva~l~~~~ 262 (513)
T 1rt8_A 238 LTPTAMVAGNPKLNLAFVAHLFNTH 262 (513)
T ss_dssp CCHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred CCHHHhcCCCHHHHHHHHHHHHhhh
Confidence 9999999998777777664443333
No 42
>3hoc_A Filamin-A; calponin homology domain, actin binding domain, acetylation, actin-binding, alternative splicing, cytoplasm, cytoskeleton; 2.30A {Homo sapiens} PDB: 3hop_A 3hor_A
Probab=97.59 E-value=7.5e-05 Score=68.13 Aligned_cols=95 Identities=23% Similarity=0.431 Sum_probs=72.0
Q ss_pred cCHHHHHHHhHhhhcC----CcchhhhcCCchhhhhhhhhhCCCCcccccccccCCChHHHHHHHHHHHHHHHh-cCccc
Q 024284 14 VGRNELLTWINNRLQL----HLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNK-LKIEK 88 (269)
Q Consensus 14 ~sR~eLL~WiN~~L~~----~~~kIEel~sGaayCQlmd~l~Pg~v~l~kVkf~a~~e~e~~~N~KiLQ~af~k-~~I~k 88 (269)
..+..||.|+|..+.- |++. +..+|-|||-|+|.+.|+.|| .|..-.+.+-.+|.+..-+.-++ +||++
T Consensus 170 s~k~~LL~W~n~~~~~~~I~nFs~--sw~DG~af~aLi~~~~P~li~----d~~~l~~~~~~~n~~~Af~~Ae~~lGi~~ 243 (272)
T 3hoc_A 170 TPKQRLLGWIQNKLPQLPITNFSR--DWQSGRALGALVDSCAPGLCP----DWDSWDASKPVTNAREAMQQADDWLGIPQ 243 (272)
T ss_dssp CHHHHHHHHHHHHCTTSCCCCSSG--GGTTSHHHHHHHHHHSTTSST----TGGGSCTTCHHHHHHHHHHHHHHHHCCCC
T ss_pred CHHHHHHHHHHhhCCCCCCCChhh--cccchHHHHHHHHHhCccccc----chhhcCccCHHHHHHHHHHHHHHhCCCCc
Confidence 3578899999987642 4553 678999999999999999873 23333345678898887777777 99999
Q ss_pred cccccccccCCCcchHHHHHHHHHHHh
Q 024284 89 HIEVNKLVKGRPLDNLEFLQWLKRYCD 115 (269)
Q Consensus 89 ~ipV~kLiKgk~qdNlEFlQWfk~f~d 115 (269)
.++.+.++.++ -|-.-.+-.+-.||.
T Consensus 244 ll~peDiv~~~-pD~ksimtYvs~~~~ 269 (272)
T 3hoc_A 244 VITPEEIVDPN-VDKHSVMTYLSQFPK 269 (272)
T ss_dssp SSCHHHHTCTT-CCHHHHHHHHTTCC-
T ss_pred cCCHHHhccCC-CChHHHHHHHHHhhc
Confidence 99999999975 466666666655554
No 43
>4b7l_A Filamin-B; structural protein, FR 1 filamin hinge ABD-1; 2.05A {Homo sapiens} PDB: 2wfn_A
Probab=97.52 E-value=0.00022 Score=66.80 Aligned_cols=115 Identities=17% Similarity=0.318 Sum_probs=80.1
Q ss_pred ccCHHHHHHHhHhhhcC-Ccch-hhhcCCchhhhhhhhhhCCCCcc-cccccccCCChHHHHHHHHHHHHHH-HhcCccc
Q 024284 13 FVGRNELLTWINNRLQL-HLSR-IEEAASGAVQCQMLDMTYPGVVP-MHKVNFDAKTEYDMIQNYKVLQDVF-NKLKIEK 88 (269)
Q Consensus 13 ~~sR~eLL~WiN~~L~~-~~~k-IEel~sGaayCQlmd~l~Pg~v~-l~kVkf~a~~e~e~~~N~KiLQ~af-~k~~I~k 88 (269)
...+..||.|+|..+.- +++. -.+..+|-|||-|+|.+.|+.++ ++. -.+.+-++|.+..-+.- +++||++
T Consensus 139 ~~~k~~LL~W~~~~~~~~~v~nF~~sw~DG~af~aLi~~~~P~~~~d~~~-----l~~~~~~~n~~~Af~~Ae~~lGip~ 213 (347)
T 4b7l_A 139 QTPKQRLLGWIQNKIPYLPITNFNQNWQDGKALGALVDSCAPGLCPDWES-----WDPQKPVDNAREAMQQADDWLGVPQ 213 (347)
T ss_dssp CCHHHHHHHHHHHHCTTSCCCCSSGGGTTSHHHHHHHHHHSTTSSTTGGG-----SCTTCHHHHHHHHHHHHHHHHCCCC
T ss_pred hhHHHHHHHHHHhhCCCcccCCCCCCccchHHHHHHHHHhCCccccchhh-----cCcCCHHHHHHHHHHHHHHhcCCCc
Confidence 44578899999997732 2222 15788999999999999999873 443 33455678888755544 4599999
Q ss_pred cccccccccCCCcchHHHHHHHHHHHhhhCC-CC-CCCCCChhhhhc
Q 024284 89 HIEVNKLVKGRPLDNLEFLQWLKRYCDSVNG-GI-MNENYNPVERRC 133 (269)
Q Consensus 89 ~ipV~kLiKgk~qdNlEFlQWfk~f~d~n~~-~~-~~~~Yd~~~rR~ 133 (269)
.++.+.++.++. |-.-.+-.+-.||.+... +. ....+||...|+
T Consensus 214 ll~peDi~~~~p-DeksimtYvs~~~~~~~~~~~~l~~k~~pskv~a 259 (347)
T 4b7l_A 214 VITPEEIIHPDV-DEHSVMTYLSQFPKAKLKPGAPLKPKLNPKKARA 259 (347)
T ss_dssp SSCHHHHTCTTC-CHHHHHHHHTTGGGCCCCTTCCCCCSCCGGGCEE
T ss_pred ccCHHHcCCCCC-ChhHHHHHHHHHhhhccCccccccccccccceeE
Confidence 999999998875 666666666666655322 11 134688877764
No 44
>2wa7_A Filamin-B; disease mutation, skeletal dysplasia, structural protein, actin-crosslinking, myogenesis, cytoskeleton; 1.85A {Homo sapiens} PDB: 2wa5_A 2wa6_A 3fer_A
Probab=97.35 E-value=0.00026 Score=62.97 Aligned_cols=100 Identities=15% Similarity=0.175 Sum_probs=78.6
Q ss_pred CHHHHHHHhHhhhcC---Ccc-hhhhcCCchhhhhhhhhhCCCCcccccccccCCChHHHHHHHHHHHHHHHhcCccc-c
Q 024284 15 GRNELLTWINNRLQL---HLS-RIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEK-H 89 (269)
Q Consensus 15 sR~eLL~WiN~~L~~---~~~-kIEel~sGaayCQlmd~l~Pg~v~l~kVkf~a~~e~e~~~N~KiLQ~af~k~~I~k-~ 89 (269)
-++.+..|||..|.- .+. =.++|.+|..-|+|++.|-|+.++ ++++-.++.....++|....-++.++.|+.. .
T Consensus 21 q~~~f~~WiN~~L~~~~~~v~dl~~dL~DGv~L~~Lle~L~~~~~~-~~~n~~~~~~~~~~eNv~~aL~~~k~~g~~lv~ 99 (245)
T 2wa7_A 21 QQNTFTRWCNEHLKCVNKRIGNLQTDLSDGLRLIALLEVLSQKRMY-RKYHQRPTFRQMQLENVSVALEFLDRESIKLVS 99 (245)
T ss_dssp HHHHHHHHHHHHHGGGTCCCSCTTTTTTTSHHHHHHHHHHHTCCCS-SCCCSSCCSHHHHHHHHHHHHHHHHHTTCCCCS
T ss_pred HHHHHHHHHHHhccccCCCccCHHHHcccHHHHHHHHHHHcCCCCc-hhcCCCCCcHHHHHHHHHHHHHHHHHcCCcccC
Confidence 357899999999842 222 257899999999999999999885 6777777888899999999999999999985 4
Q ss_pred ccccccccCCCcchHHHHHHHHHHHh
Q 024284 90 IEVNKLVKGRPLDNLEFLQWLKRYCD 115 (269)
Q Consensus 90 ipV~kLiKgk~qdNlEFlQWfk~f~d 115 (269)
|..+.++.|+..--|-++==+-.+|.
T Consensus 100 I~~~DIvdG~~kliLgLlW~li~~~~ 125 (245)
T 2wa7_A 100 IDSKAIVDGNLKLILGLVWTLILHYS 125 (245)
T ss_dssp CCHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CCHHHhhCCCHHHHHHHHHHHHHHHc
Confidence 77889999987666766522333443
No 45
>3hoc_A Filamin-A; calponin homology domain, actin binding domain, acetylation, actin-binding, alternative splicing, cytoplasm, cytoskeleton; 2.30A {Homo sapiens} PDB: 3hop_A 3hor_A
Probab=97.20 E-value=0.00094 Score=60.84 Aligned_cols=99 Identities=16% Similarity=0.205 Sum_probs=79.1
Q ss_pred HHHHHHHhHhhhc---CCcch-hhhcCCchhhhhhhhhhCCCCcccccccccCCChHHHHHHHHHHHHHHHhcCccc-cc
Q 024284 16 RNELLTWINNRLQ---LHLSR-IEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEK-HI 90 (269)
Q Consensus 16 R~eLL~WiN~~L~---~~~~k-IEel~sGaayCQlmd~l~Pg~v~l~kVkf~a~~e~e~~~N~KiLQ~af~k~~I~k-~i 90 (269)
++.+..|||..|. ..++. .++|++|...|+|++.|-|+.+ ..+++..++...+.++|..+.-+++++.||.. .|
T Consensus 49 kktft~WiN~~L~~~~~~V~dL~~DL~DGv~L~~Lle~Ls~~~l-~~~~~~~p~~r~~kleNv~~aL~~lk~~gv~lvnI 127 (272)
T 3hoc_A 49 QNTFTRWCNEHLKCVSKRIANLQTDLSDGLRLIALLEVLSQKKM-HRKHNQRPTFRQMQLENVSVALEFLDRESIKLVSI 127 (272)
T ss_dssp HHHHHHHHHHHHGGGTCCCSCTTTTTTTSHHHHHHHHHHHTSCC-SSCCCSSCCSHHHHHHHHHHHHHHHHHTTCCCSSC
T ss_pred HHHHHHHHHHHhccCCCCcccHHHHHhhHHHHHHHHHHHcCCcc-ccccCCCCccHHHHHHHHHHHHHHHHHcCCccccc
Confidence 3568999999873 33444 3789999999999999999987 57888788888999999999999999999985 58
Q ss_pred cccccccCCCcchHHHHHHHHHHHh
Q 024284 91 EVNKLVKGRPLDNLEFLQWLKRYCD 115 (269)
Q Consensus 91 pV~kLiKgk~qdNlEFlQWfk~f~d 115 (269)
-.+.++.|+..--|-++==+-.+|.
T Consensus 128 ~~~DIvdGn~kliLgLlW~Li~~~~ 152 (272)
T 3hoc_A 128 DSKAIVDGNLKLILGLIWTLILHYS 152 (272)
T ss_dssp CHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred ccchhhcCCHHHHHHHHHHHHHHHh
Confidence 8889999987666666533444554
No 46
>1wku_A Alpha-actinin 3; calponin homology domain, actin binding domain, contractIle protein; 1.60A {Homo sapiens} PDB: 1tjt_A 2r0o_A 2eyi_A 2eyn_A 3lue_K
Probab=97.02 E-value=0.0011 Score=59.27 Aligned_cols=90 Identities=18% Similarity=0.300 Sum_probs=72.1
Q ss_pred CHHHHHHHhHhhhcC---Ccch-hhhcCCchhhhhhhhhhCCCCcccccccccCCChHHHHHHHHHHHHHHHhcCccc-c
Q 024284 15 GRNELLTWINNRLQL---HLSR-IEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEK-H 89 (269)
Q Consensus 15 sR~eLL~WiN~~L~~---~~~k-IEel~sGaayCQlmd~l~Pg~v~l~kVkf~a~~e~e~~~N~KiLQ~af~k~~I~k-~ 89 (269)
-.+++..|||..|.- .+.. .++|.+|..-|+|++.|.|+.|+- ++ .++.....++|....-++.++.||.. .
T Consensus 28 q~~~f~~WiN~~L~~~~~~v~~l~~dl~DGv~L~~Lle~l~~~~v~k--~~-~~~~~~~~~eNi~~aL~~~k~~gv~lv~ 104 (254)
T 1wku_A 28 QRKTFTAWCNSHLRKAGTQIENIEEDFRNGLKLMLLLEVISGERLPR--PD-KGKMRFHKIANVNKALDFIASKGVKLVS 104 (254)
T ss_dssp HHHHHHHHHHHHHGGGTCCCSCTTTTTTTSHHHHHHHHHHHCSCCCC--CC-SCCSHHHHHHHHHHHHHHHHTTTCCCCS
T ss_pred HHHHHHHHHHHHccccCCCccCHHHHccCHHHHHHHHHHhCcCCCCC--CC-CCccHHHHHHhHHHHHHHHHHcCCCccC
Confidence 357899999999853 2333 378999999999999999998763 33 35678899999999999999999985 4
Q ss_pred ccccccccCCCcchHHHH
Q 024284 90 IEVNKLVKGRPLDNLEFL 107 (269)
Q Consensus 90 ipV~kLiKgk~qdNlEFl 107 (269)
|..+.++.|+..--|-++
T Consensus 105 I~~~DIvdG~~kliLgLl 122 (254)
T 1wku_A 105 IGAEEIVDGNLKMTLGMI 122 (254)
T ss_dssp CCHHHHHHCCHHHHHHHH
T ss_pred CCHHHHhccchHHHHHHH
Confidence 777889999766666655
No 47
>1sh5_A Plectin 1, PLTN, PCN; actin-binding domain, calponin-homology domain, structural protein; 2.00A {Mus musculus} SCOP: a.40.1.1 a.40.1.1 PDB: 1sh6_A 1mb8_A
Probab=97.00 E-value=0.0019 Score=57.14 Aligned_cols=94 Identities=17% Similarity=0.386 Sum_probs=74.3
Q ss_pred HHHHHHHhHhhhcC--------Ccch-hhhcCCchhhhhhhhhhCCCCcccccccccCCChHHHHHHHHHHHHHHHhcCc
Q 024284 16 RNELLTWINNRLQL--------HLSR-IEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKI 86 (269)
Q Consensus 16 R~eLL~WiN~~L~~--------~~~k-IEel~sGaayCQlmd~l~Pg~v~l~kVkf~a~~e~e~~~N~KiLQ~af~k~~I 86 (269)
.+.+..|||..|.. .+.. .++|.+|..-|++++.|-|+.+|- ..++.....++|....-+++++.|+
T Consensus 14 ~~~f~~WiN~~L~~~~~~~~~~~v~dl~~dl~DG~~L~~Lle~l~~~~~~~----~~~~~~~~~~eNv~~aL~~~k~~g~ 89 (245)
T 1sh5_A 14 KKTFTKWVNKHLIKHWRAEAQRHISDLYEDLRDGHNLISLLEVLSGDSLPR----EKGRMRFHKLQNVQIALDYLRHRQV 89 (245)
T ss_dssp HHHHHHHHHHHHTTCSSGGGCCCCSCTTTTTTTSHHHHHHHHHHHCCCCCC----CCCCSHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhccccccccCCCCccchHhhccCHHHHHHHHHHhcCccccC----CCCcchHHHHHhHHHHHHHHHHcCC
Confidence 56789999999854 2333 567999999999999999999882 3567788999999999999999999
Q ss_pred cc-cccccccccCCCcchHHHH-HHHHHH
Q 024284 87 EK-HIEVNKLVKGRPLDNLEFL-QWLKRY 113 (269)
Q Consensus 87 ~k-~ipV~kLiKgk~qdNlEFl-QWfk~f 113 (269)
.. .|..+.++.|+..--|-++ |-+++|
T Consensus 90 ~l~~I~~~DIvdg~~k~iLgLlw~li~~~ 118 (245)
T 1sh5_A 90 KLVNIRNDDIADGNPKLTLGLIWTIILHF 118 (245)
T ss_dssp CCCSCCHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred cccCCChHhhhcccHHHHHHHHHHHHHhh
Confidence 74 5777789999876666665 234444
No 48
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=96.95 E-value=0.0004 Score=70.33 Aligned_cols=95 Identities=18% Similarity=0.347 Sum_probs=72.2
Q ss_pred CHHHHHHHhHhhhc----C---CcchhhhcCCchhhhhhhhhhCCCCcccccccccCCChHHHHHHHHHHHHHHHh-cCc
Q 024284 15 GRNELLTWINNRLQ----L---HLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNK-LKI 86 (269)
Q Consensus 15 sR~eLL~WiN~~L~----~---~~~kIEel~sGaayCQlmd~l~Pg~v~l~kVkf~a~~e~e~~~N~KiLQ~af~k-~~I 86 (269)
.+..||.|+|..+. . |++. ...+|.|||-|++.+.|+.|++..+.- .+-.+|.+..-++..+ +||
T Consensus 122 ~~~~ll~W~~~~~~~~~~~~v~nf~~--s~~dg~~~~~li~~~~p~~~~~~~~~~-----~~~~~n~~~a~~~a~~~lg~ 194 (863)
T 1sjj_A 122 AKEGLLLWYQRKTAPYKNVNIQNFHI--SWKDGLGFCALIHRHRPELIDYGKLRK-----DDPLTNLNTAFDVAEKYLDI 194 (863)
T ss_dssp STTTTHHHHHHHHTTSTTCCCCSSSG--GGTTSHHHHHHHHTTCCSSSCSGGGGS-----CCCGGGCTHHHHHHHHHHCC
T ss_pred hHHHHHHHHHHhccCCCCCCCCCCcc--ccccHHHHHHHHHHhCCCCcChhhCCC-----CCHHHHHHHHHHHHHHhCCC
Confidence 46779999998773 1 3332 778999999999999999999887753 2345677776666665 999
Q ss_pred cccccccccccCCCcchHHHHHHHHHHHhh
Q 024284 87 EKHIEVNKLVKGRPLDNLEFLQWLKRYCDS 116 (269)
Q Consensus 87 ~k~ipV~kLiKgk~qdNlEFlQWfk~f~d~ 116 (269)
++.+..+.++.+.-.|-.-.+-.+..||..
T Consensus 195 ~~~l~~ed~~~~~~pd~~~~~~y~~~l~~~ 224 (863)
T 1sjj_A 195 PKMLDAEDIVGTARPDEKAIMTYVSSFYHA 224 (863)
T ss_dssp CCSCCHHHHTTCSSCCHHHHHHHHHHTTTT
T ss_pred CCccCHHHHhCCCCCcHHHHHHHHHHHHHH
Confidence 999999999988656666666666666654
No 49
>3f7p_A Plectin-1; plakin, hemidesmosome, cell adhesion, epidermolysis bullosa, actin-binding, alternative splicing, coiled coil, cytoplasm; 2.75A {Homo sapiens}
Probab=96.85 E-value=0.0021 Score=59.35 Aligned_cols=95 Identities=17% Similarity=0.344 Sum_probs=73.8
Q ss_pred HHHHHHHhHhhhcC---Ccch-hhhcCCchhhhhhhhhhCCCCcccccccccCCChHHHHHHHHHHHHHHHhcCccc-cc
Q 024284 16 RNELLTWINNRLQL---HLSR-IEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEK-HI 90 (269)
Q Consensus 16 R~eLL~WiN~~L~~---~~~k-IEel~sGaayCQlmd~l~Pg~v~l~kVkf~a~~e~e~~~N~KiLQ~af~k~~I~k-~i 90 (269)
++.+..|||..|.- .+.. .++|++|..-|+|++.|-|+.+|.. .++.....++|..+.-++++..||.. .|
T Consensus 75 kktft~WINs~L~~~~~~V~dL~~DL~DGvvL~~Lle~L~~~~l~~~----~~~~r~~kleNvn~aL~~lk~~gv~lv~I 150 (296)
T 3f7p_A 75 KKTFTKWVNKHLIKAQRHISDLYEDLRDGHNLISLLEVLSGDSLPRE----KGRMRFHKLQNVQIALDYLRHRQVKLVNI 150 (296)
T ss_dssp HHHHHHHHHHHHGGGTCCCSCTTTTTTTSHHHHHHHHHHHCCCCCCC----CCSSHHHHHHHHHHHHHHHHHTTCCCTTC
T ss_pred HHHHHHHHHHHcccCCCCcccHHHHHhhHHHHHHHHHHhcCCccccc----CCcChhhhhhhHHHHHHHHHHhCccccCC
Confidence 46789999999842 3333 3779999999999999999998864 46778899999999999999999974 57
Q ss_pred cccccccCCCcchHHHHHHHHHHH
Q 024284 91 EVNKLVKGRPLDNLEFLQWLKRYC 114 (269)
Q Consensus 91 pV~kLiKgk~qdNlEFlQWfk~f~ 114 (269)
..+.++.|+..--|-++==+-..|
T Consensus 151 ~~~DIvdGn~kliLgLlW~Li~~~ 174 (296)
T 3f7p_A 151 RNDDIADGNPKLTLGLIWTIILHF 174 (296)
T ss_dssp CHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred ChhhhhccchHHHHHHHHHhhccc
Confidence 788999997665565543233334
No 50
>1dxx_A Dystrophin; structural protein, muscular dystrophy, calponin homology domain, actin-binding, utrophin; 2.6A {Homo sapiens} SCOP: a.40.1.1 a.40.1.1 PDB: 1qag_A
Probab=96.78 E-value=0.0022 Score=56.82 Aligned_cols=89 Identities=15% Similarity=0.282 Sum_probs=71.3
Q ss_pred CHHHHHHHhHhhhcC----Ccch-hhhcCCchhhhhhhhhhCCCCcccccccccCCChHHHHHHHHHHHHHHHhcCccc-
Q 024284 15 GRNELLTWINNRLQL----HLSR-IEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEK- 88 (269)
Q Consensus 15 sR~eLL~WiN~~L~~----~~~k-IEel~sGaayCQlmd~l~Pg~v~l~kVkf~a~~e~e~~~N~KiLQ~af~k~~I~k- 88 (269)
-.+.+..|||..|.. .++. .++|.+|..-|++++.|-|+.+|- ..++.....++|....-+++++.|+..
T Consensus 17 q~~~f~~WiN~~L~~~~~~~v~dl~~dl~DG~~L~~Lle~l~~~~~~~----~~~~~~~~~~eNv~~aL~~~k~~g~~l~ 92 (246)
T 1dxx_A 17 QKKTFTKWVNAQFSKFGKQHIENLFSDLQDGRRLLDLLEGLTGQKLPK----EKGSTRVHALNNVNKALRVLQNNNVDLV 92 (246)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCSCTTTTTTTSHHHHHHHHHHHSCCCCC----CCCSSHHHHHHHHHHHHHHHHHTTCCCT
T ss_pred HHHHHHHHHHHhccccCCCCccCHHHHhCcHHHHHHHHHHHcCCcCCC----CCCccHHHHHHHHHHHHHHHHHcCCccc
Confidence 357889999999852 2333 578999999999999999998773 246778899999999999999999984
Q ss_pred cccccccccCCCcchHHHH
Q 024284 89 HIEVNKLVKGRPLDNLEFL 107 (269)
Q Consensus 89 ~ipV~kLiKgk~qdNlEFl 107 (269)
.|-.+.++.|+..--|-++
T Consensus 93 ~I~~~DIvdg~~~liL~Ll 111 (246)
T 1dxx_A 93 NIGSTDIVDGNHKLTLGLI 111 (246)
T ss_dssp TCCHHHHHTTCHHHHHHHH
T ss_pred cCCHHHhhcccHHHHHHHH
Confidence 5778889999765555544
No 51
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=96.26 E-value=0.0086 Score=58.83 Aligned_cols=83 Identities=17% Similarity=0.342 Sum_probs=64.2
Q ss_pred HHHHHHhHhhhcCCcc------------hhhhcCCchhhhhhhhhhCCCCcccccccccCCC-hHHHHHHHHHHHHHH-H
Q 024284 17 NELLTWINNRLQLHLS------------RIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKT-EYDMIQNYKVLQDVF-N 82 (269)
Q Consensus 17 ~eLL~WiN~~L~~~~~------------kIEel~sGaayCQlmd~l~Pg~v~l~kVkf~a~~-e~e~~~N~KiLQ~af-~ 82 (269)
+|--.||++...+... =.+-|.+|++-|+|++.|.||+||+++|+-.++. ..-+..|..-+-.+- +
T Consensus 8 ~~~~~Wl~~~~~l~~~~~~~~~~~~~~~l~~~L~~G~~Lc~l~n~l~p~~v~~~~~~~~~~~~~f~~~~ni~~Fl~~~~~ 87 (587)
T 3ky9_A 8 RQCTHWLIQCRVLPPSHRVTWEGAQVCELAQALRDGVLLCQLLNNLLPHAINLREVNLRPQMSQFLCLKNIRTFLSTCCE 87 (587)
T ss_dssp HHHHHHHHHTTCSCTTSTTTSTTCCHHHHHHHHSSTHHHHHHHHHHSTTSSCGGGSCSSCTTBHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCcccccCCCCChhhHHHHhCcHHHHHHHHHHhCCCCCCccccCCCccccchHHHHHHHHHHHHHHH
Confidence 5788999987554442 2366899999999999999999999999855554 577888888888887 8
Q ss_pred hcCccc--cccccccccCC
Q 024284 83 KLKIEK--HIEVNKLVKGR 99 (269)
Q Consensus 83 k~~I~k--~ipV~kLiKgk 99 (269)
++||+. .+....|..++
T Consensus 88 ~~g~~~~~~f~~~Dl~~~~ 106 (587)
T 3ky9_A 88 KFGLKRSELFEAFDLFDVQ 106 (587)
T ss_dssp TTCCCTTSSCCHHHHHTCS
T ss_pred HcCCCHHHcCCchhhhccC
Confidence 999986 35555666554
No 52
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=96.22 E-value=0.0048 Score=62.46 Aligned_cols=81 Identities=17% Similarity=0.274 Sum_probs=64.7
Q ss_pred HHHHHHHhHhhhc---CCcch-hhhcCCchhhhhhhhhhCCCCcccccccccCCChHHHHHHHHHHHHHHHhcCccc-cc
Q 024284 16 RNELLTWINNRLQ---LHLSR-IEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEK-HI 90 (269)
Q Consensus 16 R~eLL~WiN~~L~---~~~~k-IEel~sGaayCQlmd~l~Pg~v~l~kVkf~a~~e~e~~~N~KiLQ~af~k~~I~k-~i 90 (269)
.+.+..|||..|. ..+.. .++|.+|...|+|++.|-|+.||- ++ .++.....++|..+.-++.+..||.. .|
T Consensus 10 ~~~f~~Win~~L~~~~~~v~~l~~dl~DG~~L~~l~e~l~~~~~~~--~~-~~~~~~~~~eN~~~~l~~~~~~g~~~~~i 86 (863)
T 1sjj_A 10 RKTFTAWCNSHLRKAGTQIENIEEDFRDGLKLMLLLEVISGERLAK--PE-RGKMRVHKISNVNKALDFIASKGVKLVSI 86 (863)
T ss_dssp HHHHHHHHHHHHHHHCSCCCCCSSTTSSCHHHHHHHHHTSCCCCCC--SC-CCSSHHHHHHHHHHHHHHHHHTTCCCTTC
T ss_pred HHHHHHHHHHHhccCCCCccCHHHHhcCHHHHHHHHHHhCCCceeC--CC-CCccHHHHHHHHHHHHHHHHHcCCccCCC
Confidence 4678999999983 23333 377999999999999999998874 32 35788999999999999999999985 46
Q ss_pred cccccccCC
Q 024284 91 EVNKLVKGR 99 (269)
Q Consensus 91 pV~kLiKgk 99 (269)
-.+.++.|+
T Consensus 87 ~~~di~~g~ 95 (863)
T 1sjj_A 87 GAEEIVDGN 95 (863)
T ss_dssp CSHHHHTTC
T ss_pred ChHHhhcCC
Confidence 677777774
No 53
>4b7l_A Filamin-B; structural protein, FR 1 filamin hinge ABD-1; 2.05A {Homo sapiens} PDB: 2wfn_A
Probab=95.89 E-value=0.023 Score=53.15 Aligned_cols=99 Identities=15% Similarity=0.191 Sum_probs=76.8
Q ss_pred HHHHHHhHhhhc---CCcchh-hhcCCchhhhhhhhhhCCCCcccccccccCCChHHHHHHHHHHHHHHHhcCccc-ccc
Q 024284 17 NELLTWINNRLQ---LHLSRI-EEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEK-HIE 91 (269)
Q Consensus 17 ~eLL~WiN~~L~---~~~~kI-Eel~sGaayCQlmd~l~Pg~v~l~kVkf~a~~e~e~~~N~KiLQ~af~k~~I~k-~ip 91 (269)
+-.-.|||..|. ..++.+ ++|++|..-|+|++.|-++.++ +++.-.++.....++|..+.=+.+++.||.. .|.
T Consensus 20 ktFt~WiN~~L~~~~~~V~dL~~Dl~DG~~L~~Lle~ls~~~l~-~~~~~~p~~r~~k~eNv~~al~~~~~~g~~lv~i~ 98 (347)
T 4b7l_A 20 NTFTRWCNEHLKSVNKRIGNLQTDLSDGLRLIALLEVLSQKRMY-RKYHQRPTFRQMQLENVSVALEFLDRESIKLVSID 98 (347)
T ss_dssp HHHHHHHHHHHGGGTCCCSCTTTTTTTSHHHHHHHHHHHTCCCS-SCCCSSCCSHHHHHHHHHHHHHHHHHTTCCCSSCC
T ss_pred HHHHHHHHHhhCcCCCCcCCHHHHhcCHHHHHHHHHHHcCCccC-hhhcCCcccHHHHHHHHHHHHHHHHHhccccCCCC
Confidence 447889999873 344443 6899999999999999988876 3455567888899999999999999999985 688
Q ss_pred ccccccCCCcchHHHHHHHHHHHhh
Q 024284 92 VNKLVKGRPLDNLEFLQWLKRYCDS 116 (269)
Q Consensus 92 V~kLiKgk~qdNlEFlQWfk~f~d~ 116 (269)
.+.++.|+..--|-++==+-.+|.-
T Consensus 99 ~~DIvdGn~~liLgLiW~li~~~~i 123 (347)
T 4b7l_A 99 SKAIVDGNLKLILGLVWTLILHYSI 123 (347)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHT
T ss_pred cchhhcCCHhhHHHHHHHHHHHHhh
Confidence 8999999876666655334445543
No 54
>1wix_A HOOK homolog 1, RSGI RUH-026; structural genomics, mouse cDNA, riken structural genomics/proteomics initiative, unknown function; NMR {Mus musculus} SCOP: a.40.3.1
Probab=95.15 E-value=0.03 Score=47.36 Aligned_cols=72 Identities=14% Similarity=0.142 Sum_probs=47.6
Q ss_pred ccccCCCccCHHHHHHHhHhhh-cCCcchhhhcCCchhhhhhhhhhCCCCcc---cccccccCCC-hHHHHHHHHHH
Q 024284 6 GMMDSAYFVGRNELLTWINNRL-QLHLSRIEEAASGAVQCQMLDMTYPGVVP---MHKVNFDAKT-EYDMIQNYKVL 77 (269)
Q Consensus 6 gmm~~~~~~sR~eLL~WiN~~L-~~~~~kIEel~sGaayCQlmd~l~Pg~v~---l~kVkf~a~~-e~e~~~N~KiL 77 (269)
|-|+..-.--..-|+.|||..- ...++.+++|++|++.-+++..|-|...+ |.|++=++.. -.-..+|+|.|
T Consensus 1 ~~~~~~~~~~~~aLl~W~~tf~~~~~~~~~~dL~DG~~L~~iL~~IDp~~F~~~~l~~i~~~~~~nw~lr~~NLk~l 77 (164)
T 1wix_A 1 GSSGSSGLPLCDSLIIWLQTFKTASPCQDVKQLTNGVTMAQVLHQIDVAWFSESWLSRIKDDVGDNWRIKASNLKKV 77 (164)
T ss_dssp CCCCCCSCHHHHHHHHHHTTCCCSSCCCSHHHHTTSHHHHHHHHHHCTTTSCHHHHTTCCSGGGGCSHHHHHHHHHH
T ss_pred CCcccchhHHHHHHHHHHHHcCCCCCcCcHHHhccHHHHHHHHHHhCccccCchHhhhhcccCcccHHHHHHHHHHH
Confidence 3455544445678999999642 33688899999999999999999998654 3444422221 11245566554
No 55
>3qh9_A Liprin-beta-2; coiled-coil, dimerization, structural protein; 2.01A {Homo sapiens}
Probab=80.40 E-value=2.8 Score=31.96 Aligned_cols=33 Identities=36% Similarity=0.526 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHhHHH
Q 024284 185 EVQALSKEITDLKLSVDLLEKERDFYFAKLRDI 217 (269)
Q Consensus 185 ~i~~L~~q~~elk~~ve~LEkERDFYF~KLRdI 217 (269)
..+.|-+++++|+..|+.||.||-=|=-||+.=
T Consensus 20 ~~E~L~qEi~~Lr~kv~elEnErlQyEkKLKsT 52 (81)
T 3qh9_A 20 KAEELLQELRHLKIKVEELENERNQYEWKLKAT 52 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 456899999999999999999999999999976
No 56
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=64.20 E-value=12 Score=26.60 Aligned_cols=34 Identities=26% Similarity=0.311 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhHH
Q 024284 183 AQEVQALSKEITDLKLSVDLLEKERDFYFAKLRD 216 (269)
Q Consensus 183 ~~~i~~L~~q~~elk~~ve~LEkERDFYF~KLRd 216 (269)
..++++|.++..+|+..++.|+.|-.+.=+-|++
T Consensus 29 e~~~~~L~~~N~~L~~~i~~L~~E~~~Lk~ll~e 62 (63)
T 1ci6_A 29 TGECKELEKKNEALKERADSLAKEIQYLKDLIEE 62 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3467788999999999999999998876555443
No 57
>1m5i_A APC protein; coiled-coil, antitumor protein; 2.00A {Homo sapiens} SCOP: h.4.13.1
Probab=63.83 E-value=11 Score=30.67 Aligned_cols=38 Identities=32% Similarity=0.473 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHhHHHHHHhc
Q 024284 185 EVQALSKEITDLKLSVDLLEKERDFYFAKLRDIEILCQ 222 (269)
Q Consensus 185 ~i~~L~~q~~elk~~ve~LEkERDFYF~KLRdIEiLcQ 222 (269)
-+++|..+-.-|-..++.=||||+.||++|+.+.-=..
T Consensus 8 ~leeL~rer~~Ll~EieKEekek~wyysqlq~l~kRi~ 45 (125)
T 1m5i_A 8 YLEELEKERSLLLADLDKEEKEKDWYYAQLQNLTKRID 45 (125)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhh
Confidence 35677777666777788899999999999998765433
No 58
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A
Probab=61.41 E-value=12 Score=28.86 Aligned_cols=32 Identities=34% Similarity=0.444 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHhHH
Q 024284 185 EVQALSKEITDLKLSVDLLEKERDFYFAKLRD 216 (269)
Q Consensus 185 ~i~~L~~q~~elk~~ve~LEkERDFYF~KLRd 216 (269)
+...|..|++.|+.....+.+|||.|=.|+-+
T Consensus 56 e~~~L~~e~~~L~~e~~~~~~e~d~~k~k~~~ 87 (90)
T 2wt7_B 56 EKTQLIQQVEQLKQEVSRLARERDAYKVKSEK 87 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34466777888888888899999999888754
No 59
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=53.42 E-value=26 Score=24.28 Aligned_cols=29 Identities=17% Similarity=0.291 Sum_probs=21.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Q 024284 182 SAQEVQALSKEITDLKLSVDLLEKERDFY 210 (269)
Q Consensus 182 ~~~~i~~L~~q~~elk~~ve~LEkERDFY 210 (269)
...+++.|..|+.+|+..++.|.++-+=.
T Consensus 17 ~~~d~eaLk~E~~eLk~k~~~L~~~~~el 45 (53)
T 2yy0_A 17 ENPEIELLRLELAEMKEKYEAIVEENKKL 45 (53)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34578888888888888888888764433
No 60
>2xdj_A Uncharacterized protein YBGF; unknown function; 1.82A {Escherichia coli} PDB: 2wz7_A
Probab=39.33 E-value=42 Score=25.22 Aligned_cols=28 Identities=14% Similarity=0.310 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHHHHHHH--------HHhhHHHH
Q 024284 184 QEVQALSKEITDLKLSVDLL--------EKERDFYF 211 (269)
Q Consensus 184 ~~i~~L~~q~~elk~~ve~L--------EkERDFYF 211 (269)
.++++|+.|+.+|+..+|.+ ++-||+|=
T Consensus 27 ~Ql~~Lq~Ev~~LRGqiE~~~~~l~ql~~rQrd~Y~ 62 (83)
T 2xdj_A 27 QQLSDNQSDIDSLRGQIQENQYQLNQVVERQKQILL 62 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 35667777777777666663 44678884
No 61
>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1
Probab=29.47 E-value=92 Score=23.58 Aligned_cols=35 Identities=31% Similarity=0.451 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhHHHHHHhcCC
Q 024284 184 QEVQALSKEITDLKLSVDLLEKERDFYFAKLRDIEILCQTP 224 (269)
Q Consensus 184 ~~i~~L~~q~~elk~~ve~LEkERDFYF~KLRdIEiLcQ~~ 224 (269)
..+.+|.++...|+..|+.|++|=+ .|| ++|.|-+
T Consensus 43 ~r~~~Le~EN~~Lr~~v~~L~~E~~----~Lr--~ll~~~p 77 (87)
T 1hjb_A 43 HKVLELTAENERLQKKVEQLSRELS----TLR--NLFKQLP 77 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH----HHH--HHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH----HHH--HHHHHCc
Confidence 3567889999999999999999944 455 3455544
No 62
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=28.81 E-value=42 Score=26.32 Aligned_cols=17 Identities=47% Similarity=0.632 Sum_probs=8.5
Q ss_pred HHHHHHHHHHHHHHhhH
Q 024284 192 EITDLKLSVDLLEKERD 208 (269)
Q Consensus 192 q~~elk~~ve~LEkERD 208 (269)
++..|+..++.||+||+
T Consensus 13 ~~~~lr~ei~~Le~E~~ 29 (100)
T 1go4_E 13 EADTLRLKVEELEGERS 29 (100)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 44444555555555554
No 63
>1a93_B MAX protein, coiled coil, LZ; leucine zipper, 2D solution structure, H-bonds, buried salt bridge, proto-oncogene, nuclear protein; NMR {Mus musculus} SCOP: h.1.3.1 PDB: 2a93_B
Probab=26.87 E-value=53 Score=21.08 Aligned_cols=20 Identities=35% Similarity=0.439 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 024284 186 VQALSKEITDLKLSVDLLEK 205 (269)
Q Consensus 186 i~~L~~q~~elk~~ve~LEk 205 (269)
+.+.+++++|||.+-..||.
T Consensus 9 n~a~qqDIddlkrQN~~Le~ 28 (34)
T 1a93_B 9 NDTHQQDIDDLKRQNALLEQ 28 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred hHhhHhhHHHHHHHHHHHHH
Confidence 33444455555544444444
No 64
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=26.03 E-value=94 Score=19.36 Aligned_cols=19 Identities=42% Similarity=0.585 Sum_probs=8.7
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 024284 185 EVQALSKEITDLKLSVDLL 203 (269)
Q Consensus 185 ~i~~L~~q~~elk~~ve~L 203 (269)
+|..|.+++..||..+..|
T Consensus 3 eiaalkqeiaalkkeiaal 21 (33)
T 4dzn_A 3 EIAALKQEIAALKKEIAAL 21 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444443
No 65
>1jcd_A Major outer membrane lipoprotein; protein folding, coiled coil, helix capping, alanine-zipper, membrane protein; 1.30A {Escherichia coli} SCOP: h.1.16.1 PDB: 1eq7_A 1t8z_A* 2guv_A 2gus_A 1jcc_A 1kfn_A 1kfm_A
Probab=25.81 E-value=70 Score=22.16 Aligned_cols=22 Identities=9% Similarity=0.098 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 024284 184 QEVQALSKEITDLKLSVDLLEK 205 (269)
Q Consensus 184 ~~i~~L~~q~~elk~~ve~LEk 205 (269)
+++.+|+.++++|...|+.|..
T Consensus 4 aki~~Lss~V~~L~~kVdqLss 25 (52)
T 1jcd_A 4 AKADQASSDAQTANAKADQASN 25 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4677777777777777777766
No 66
>2zop_A Putative uncharacterized protein TTHB164; all alpha proteins, plasmid, NPPSFA; 2.10A {Thermus thermophilus HB8}
Probab=25.71 E-value=33 Score=26.99 Aligned_cols=17 Identities=24% Similarity=0.655 Sum_probs=14.1
Q ss_pred chHHHHHHHHHHHhhhC
Q 024284 102 DNLEFLQWLKRYCDSVN 118 (269)
Q Consensus 102 dNlEFlQWfk~f~d~n~ 118 (269)
+-|+|+.|+|+|.++.-
T Consensus 96 e~La~~~WlKRfAea~l 112 (114)
T 2zop_A 96 EVLAAAEWFKRFAQALI 112 (114)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 46899999999988753
No 67
>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1
Probab=24.09 E-value=48 Score=24.90 Aligned_cols=27 Identities=30% Similarity=0.433 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHH
Q 024284 183 AQEVQALSKEITDLKLSVDLLEKERDF 209 (269)
Q Consensus 183 ~~~i~~L~~q~~elk~~ve~LEkERDF 209 (269)
.++++.|++++.||...+..||.|-..
T Consensus 14 REEVevLKe~I~EL~e~~~qLE~EN~~ 40 (78)
T 1dip_A 14 REEVEILKEQIRELVEKNSQLERENTL 40 (78)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 357789999999999999999999543
No 68
>3brv_B NF-kappa-B essential modulator; NEMO, IKK-gamma, FIP3, ikkap1, NF-KB essential modulator, at binding, kinase, nucleotide-binding, phosphoprotein; 2.20A {Homo sapiens} PDB: 3brt_B
Probab=23.08 E-value=1.4e+02 Score=21.96 Aligned_cols=33 Identities=21% Similarity=0.388 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHHH-------HHhhHHHHHHhHHHHHH
Q 024284 188 ALSKEITDLKLSVDLL-------EKERDFYFAKLRDIEIL 220 (269)
Q Consensus 188 ~L~~q~~elk~~ve~L-------EkERDFYF~KLRdIEiL 220 (269)
+|.+-.+.|+...++| ..||+|+=.||+.---+
T Consensus 23 AlkqsNq~mkeR~eeL~~wqekQkeErefl~~kf~EAr~l 62 (70)
T 3brv_B 23 AIRQSNQILRERCEELLHFQASQREEKEFLMCKFQEARKL 62 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 3444455566666666 46999999999865433
No 69
>2oeb_A Hypothetical protein; unknown function, PSI-2, MCSG, struc genomics, protein structure initiative, midwest center for structural genomics; 1.66A {Archaeoglobus fulgidus} SCOP: a.70.2.1
Probab=22.93 E-value=38 Score=28.23 Aligned_cols=18 Identities=22% Similarity=0.744 Sum_probs=15.0
Q ss_pred chHHHHHHHHHHHhhhCC
Q 024284 102 DNLEFLQWLKRYCDSVNG 119 (269)
Q Consensus 102 dNlEFlQWfk~f~d~n~~ 119 (269)
.-|+|+.|+|+|.++...
T Consensus 135 E~La~l~WlKRfAea~l~ 152 (155)
T 2oeb_A 135 EALSILNWIKKFAKAMLE 152 (155)
T ss_dssp HHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHcc
Confidence 458899999999998754
No 70
>2e62_A Protein AT5G25060; CWF21 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Arabidopsis thaliana}
Probab=22.66 E-value=35 Score=24.63 Aligned_cols=12 Identities=33% Similarity=0.313 Sum_probs=10.1
Q ss_pred HHhHHHHHHhcC
Q 024284 212 AKLRDIEILCQT 223 (269)
Q Consensus 212 ~KLRdIEiLcQ~ 223 (269)
.|||.||+-|=+
T Consensus 16 ~klR~IEvk~me 27 (61)
T 2e62_A 16 QKRRRIEVALIE 27 (61)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 699999998754
No 71
>2l5g_B Putative uncharacterized protein NCOR2, G protein pathway suppressor 2; GPS2, SMRT, TBL1, CO-repressor, transcription regulator; NMR {Homo sapiens}
Probab=22.22 E-value=1.3e+02 Score=20.20 Aligned_cols=24 Identities=29% Similarity=0.470 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Q 024284 183 AQEVQALSKEITDLKLSVDLLEKE 206 (269)
Q Consensus 183 ~~~i~~L~~q~~elk~~ve~LEkE 206 (269)
+.+|+...+++++|+.....||..
T Consensus 15 drEI~Kte~kI~~lqkKlkeLee~ 38 (42)
T 2l5g_B 15 DREITMVEQQISKLKKKQQQLEEE 38 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 456777778888888888888764
No 72
>1m7k_A Silencer of death domains; three helix bundle, chaperone; NMR {Homo sapiens} SCOP: a.7.7.1
Probab=21.63 E-value=1.5e+02 Score=23.06 Aligned_cols=58 Identities=21% Similarity=0.152 Sum_probs=38.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHH--HhhHHHHHHhHHHHHHhcC------CCCCCh--------hHHHHHhhhhhcc
Q 024284 182 SAQEVQALSKEITDLKLSVDLLE--KERDFYFAKLRDIEILCQT------PELENL--------PVRISGLLILIIL 242 (269)
Q Consensus 182 ~~~~i~~L~~q~~elk~~ve~LE--kERDFYF~KLRdIEiLcQ~------~e~e~~--------~~~~~I~~ILYaT 242 (269)
+...|.++..++.+|...|+..+ + +|.=|.+|- |+|.+. .+.+.. ..+++||.+|-.-
T Consensus 22 ~~~kI~~I~~ev~~L~~~V~~f~G~k-~dkey~~L~--E~L~k~LLkLD~IeteG~~~vR~~RK~~Vk~iQ~~l~~L 95 (99)
T 1m7k_A 22 SIKKIIHVLEKVQYLEQEVEEFVGKK-TDKAYWLLE--EMLTKELLELDSVETGGQDSVRQARKEAVCKIQAILEKL 95 (99)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHCCSCT-TSHHHHHHH--HHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCc-hHHHHHHHH--HHHHHHHHHHCCcCcCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 45678888888888888888766 3 566577765 577663 222222 3578888877543
No 73
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D
Probab=21.45 E-value=2.1e+02 Score=19.82 Aligned_cols=25 Identities=28% Similarity=0.348 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHH
Q 024284 185 EVQALSKEITDLKLSVDLLEKERDF 209 (269)
Q Consensus 185 ~i~~L~~q~~elk~~ve~LEkERDF 209 (269)
++..|..+..+|+..++.|+.|-..
T Consensus 31 ~v~~L~~~n~~L~~ei~~L~~e~~~ 55 (63)
T 2wt7_A 31 ETDQLEDEKSALQTEIANLLKEKEK 55 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455666666666667777666443
No 74
>3trt_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural protein; 2.30A {Homo sapiens} PDB: 3klt_A*
Probab=21.13 E-value=1.1e+02 Score=21.69 Aligned_cols=22 Identities=23% Similarity=0.297 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh
Q 024284 185 EVQALSKEITDLKLSVDLLEKE 206 (269)
Q Consensus 185 ~i~~L~~q~~elk~~ve~LEkE 206 (269)
.+...+.++.+|+.++..|+.|
T Consensus 50 ~l~~~k~Ei~elrr~iq~L~~e 71 (77)
T 3trt_A 50 ALRQAKQESTEYRRQVQSLTME 71 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3445567788888888888876
No 75
>2qjx_A Protein BIM1; calponin homology domain, protein binding; 1.90A {Saccharomyces cerevisiae}
Probab=20.58 E-value=44 Score=27.05 Aligned_cols=17 Identities=24% Similarity=0.403 Sum_probs=14.1
Q ss_pred hHHHHHHHHHHHhhhCC
Q 024284 103 NLEFLQWLKRYCDSVNG 119 (269)
Q Consensus 103 NlEFlQWfk~f~d~n~~ 119 (269)
=.|+|+|+.++.+.|+.
T Consensus 12 R~elL~WiN~~L~~n~~ 28 (127)
T 2qjx_A 12 RTELLTWLNGLLNLNYK 28 (127)
T ss_dssp HHHHHHHHHHHHTCCCC
T ss_pred HHHHHHHHHHHHcCCcc
Confidence 35999999999997654
No 76
>2ve7_A Kinetochore protein HEC1, kinetochore protein SPC; mitosis, centromere, cell cycle, microtubule, C division, calponin homology; 2.88A {Homo sapiens} PDB: 3iz0_C*
Probab=20.42 E-value=80 Score=28.75 Aligned_cols=24 Identities=25% Similarity=0.350 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Q 024284 184 QEVQALSKEITDLKLSVDLLEKER 207 (269)
Q Consensus 184 ~~i~~L~~q~~elk~~ve~LEkER 207 (269)
+++++|.++.++|+..++.||+++
T Consensus 185 ~eie~L~~~~~~L~eEi~~Le~~~ 208 (315)
T 2ve7_A 185 FKLESLEAKNRALNEQIARLEQER 208 (315)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467778888888888888887775
Done!