Query 024285
Match_columns 269
No_of_seqs 109 out of 1207
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 05:36:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024285.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024285hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2opw_A Phyhd1 protein; double- 100.0 3.8E-49 1.3E-53 341.6 20.1 265 5-269 2-277 (291)
2 2fct_A Syringomycin biosynthes 100.0 3.6E-38 1.2E-42 275.5 21.1 232 1-269 4-271 (313)
3 2a1x_A Phytanoyl-COA dioxygena 100.0 3.8E-38 1.3E-42 274.7 19.7 235 4-268 20-263 (308)
4 3emr_A ECTD; double stranded b 100.0 3.1E-39 1.1E-43 281.2 8.4 219 5-260 33-270 (310)
5 3gja_A CYTC3; halogenase, beta 100.0 1E-37 3.6E-42 272.7 17.1 223 4-266 9-270 (319)
6 2rdq_A 1-deoxypentalenic acid 100.0 3.7E-34 1.3E-38 247.1 15.2 220 6-260 17-254 (288)
7 3nnf_A CURA; non-HAEM Fe(II)/a 100.0 3.3E-29 1.1E-33 208.6 12.4 224 4-266 22-281 (344)
8 2dbn_A Hypothetical protein YB 99.6 1.5E-14 5.2E-19 128.2 14.2 223 5-260 112-408 (461)
9 2hbt_A EGL nine homolog 1; pro 98.6 1.5E-06 5.3E-11 72.4 15.5 82 147-259 128-214 (247)
10 2jig_A Prolyl-4 hydroxylase; h 98.3 2.3E-05 7.7E-10 64.4 13.9 96 147-259 108-218 (224)
11 3dkq_A PKHD-type hydroxylase S 98.0 2.1E-05 7.1E-10 65.2 8.2 83 148-259 110-196 (243)
12 3itq_A Prolyl 4-hydroxylase, a 97.9 0.00024 8.2E-09 57.8 13.4 163 16-259 37-213 (216)
13 2rg4_A Uncharacterized protein 97.7 0.00057 2E-08 55.6 12.6 134 108-260 70-209 (216)
14 3kt7_A PKHD-type hydroxylase T 97.0 0.018 6E-07 53.3 14.6 124 110-260 96-230 (633)
15 1e5r_A Proline oxidase; oxidor 88.4 0.88 3E-05 38.3 6.1 103 116-257 74-176 (290)
16 3qh6_A CT296; iron, modeling; 76.2 4.7 0.00016 29.3 4.9 41 6-46 6-46 (157)
17 3pl0_A Uncharacterized protein 75.6 19 0.00067 29.4 9.3 37 223-259 203-248 (254)
18 3eat_X Pyoverdine biosynthesis 75.6 3.7 0.00013 34.4 5.1 43 217-259 239-282 (293)
19 1jr7_A GABT protein, hypotheti 73.2 5.3 0.00018 33.8 5.4 49 217-266 256-309 (311)
20 1otj_A Alpha-ketoglutarate-dep 72.4 4.5 0.00015 33.5 4.8 42 217-258 233-275 (283)
21 1nx8_A CARC, carbapenem syntha 71.6 5.1 0.00017 32.9 5.0 40 217-256 229-270 (273)
22 3pvj_A Alpha-ketoglutarate-dep 70.3 4.7 0.00016 33.4 4.5 42 217-258 231-273 (277)
23 1oih_A Putative alkylsulfatase 69.6 4.9 0.00017 33.6 4.5 42 217-258 242-284 (301)
24 3r1j_A Alpha-ketoglutarate-dep 66.0 6.5 0.00022 33.1 4.5 43 217-259 235-278 (301)
25 1ds1_A Clavaminate synthase 1; 64.7 8.7 0.0003 32.5 5.1 40 218-257 258-301 (324)
26 2opk_A Hypothetical protein; p 63.4 4.2 0.00014 28.5 2.5 34 222-256 75-109 (112)
27 2wbq_A L-arginine beta-hydroxy 62.5 8.7 0.0003 33.0 4.8 39 219-257 296-338 (358)
28 1o4t_A Putative oxalate decarb 62.4 6.9 0.00024 28.2 3.6 31 220-251 96-127 (133)
29 2og5_A Putative oxygenase; non 62.1 8.6 0.00029 33.1 4.7 40 219-258 291-334 (357)
30 1vr3_A Acireductone dioxygenas 61.5 7.7 0.00026 30.4 3.8 46 218-267 125-170 (191)
31 2gu9_A Tetracenomycin polyketi 61.4 7.6 0.00026 26.5 3.5 22 221-242 63-84 (113)
32 1v70_A Probable antibiotics sy 61.2 7.3 0.00025 26.0 3.4 22 221-242 68-89 (105)
33 3o2g_A Gamma-butyrobetaine dio 59.4 8.1 0.00028 33.7 4.0 42 217-259 326-370 (388)
34 3ht1_A REMF protein; cupin fol 59.2 9.2 0.00032 27.6 3.8 23 220-242 79-101 (145)
35 1zrr_A E-2/E-2' protein; nicke 57.9 17 0.00057 28.1 5.2 45 218-266 120-164 (179)
36 3s57_A Alpha-ketoglutarate-dep 56.2 15 0.00053 28.8 4.8 39 218-256 158-201 (204)
37 3h8u_A Uncharacterized conserv 55.7 7.6 0.00026 27.4 2.7 25 221-246 80-104 (125)
38 1o5u_A Novel thermotoga mariti 55.7 1.7 5.8E-05 30.2 -0.8 21 221-241 69-89 (101)
39 1x82_A Glucose-6-phosphate iso 55.0 8.7 0.0003 29.8 3.2 25 218-242 117-141 (190)
40 3jzv_A Uncharacterized protein 54.9 17 0.00057 27.5 4.7 31 221-252 92-123 (166)
41 3cew_A Uncharacterized cupin p 54.7 9.2 0.00031 27.0 3.0 37 221-258 67-103 (125)
42 1w9y_A 1-aminocyclopropane-1-c 54.5 50 0.0017 27.8 8.1 76 150-266 174-261 (319)
43 3kgz_A Cupin 2 conserved barre 53.9 11 0.00037 28.3 3.4 34 221-255 83-117 (156)
44 3i3q_A Alpha-ketoglutarate-dep 53.7 15 0.00053 29.1 4.5 43 218-260 154-205 (211)
45 1lr5_A Auxin binding protein 1 52.3 15 0.00051 27.4 4.0 24 219-242 87-110 (163)
46 1vj2_A Novel manganese-contain 52.2 10 0.00034 26.9 2.9 22 221-242 87-108 (126)
47 2oa2_A BH2720 protein; 1017534 52.2 9.6 0.00033 28.0 2.9 23 220-242 88-110 (148)
48 2iuw_A Alkylated repair protei 52.1 16 0.00055 29.5 4.4 43 217-259 184-231 (238)
49 4i4a_A Similar to unknown prot 51.0 9.6 0.00033 26.9 2.7 22 221-242 73-94 (128)
50 2arc_A ARAC, arabinose operon 50.6 12 0.00043 27.3 3.3 23 220-242 56-78 (164)
51 1gp6_A Leucoanthocyanidin diox 49.9 57 0.0019 27.9 7.8 81 144-266 223-316 (356)
52 3l2h_A Putative sugar phosphat 49.2 9.4 0.00032 28.4 2.4 26 221-247 87-113 (162)
53 2fqp_A Hypothetical protein BP 48.2 11 0.00038 25.3 2.5 27 220-247 59-85 (97)
54 3i7d_A Sugar phosphate isomera 48.1 11 0.00036 28.4 2.6 26 221-247 84-111 (163)
55 2b8m_A Hypothetical protein MJ 48.1 8.7 0.0003 26.7 2.0 20 223-242 69-88 (117)
56 2ozj_A Cupin 2, conserved barr 46.7 12 0.00041 25.8 2.5 22 221-242 77-98 (114)
57 2bnm_A Epoxidase; oxidoreducta 45.5 14 0.00048 28.4 3.0 22 220-241 162-183 (198)
58 2i45_A Hypothetical protein; n 45.2 11 0.00038 25.6 2.1 22 221-242 68-89 (107)
59 3d82_A Cupin 2, conserved barr 45.1 11 0.00038 25.1 2.1 22 221-242 69-90 (102)
60 2f4p_A Hypothetical protein TM 44.9 8.2 0.00028 28.5 1.4 21 222-242 89-109 (147)
61 3rcq_A Aspartyl/asparaginyl be 43.1 20 0.00068 28.2 3.5 39 221-260 147-185 (197)
62 2fho_A Spliceosomal protein SF 43.1 16 0.00055 21.4 2.2 22 3-24 18-39 (47)
63 1qwr_A Mannose-6-phosphate iso 41.8 19 0.00067 30.4 3.5 25 220-244 158-182 (319)
64 3lqv_P Splicing factor 3B subu 41.0 17 0.00058 20.4 1.9 21 3-23 19-39 (39)
65 2q30_A Uncharacterized protein 40.4 15 0.00052 24.8 2.2 22 221-242 75-96 (110)
66 2q4a_A Clavaminate synthase-li 40.2 12 0.00042 31.5 2.0 33 218-251 292-325 (330)
67 4e2g_A Cupin 2 conserved barre 39.7 26 0.0009 24.4 3.5 22 221-242 80-101 (126)
68 1y9q_A Transcriptional regulat 38.7 19 0.00065 27.5 2.8 28 220-248 144-171 (192)
69 3ibm_A Cupin 2, conserved barr 38.2 28 0.00094 26.2 3.6 22 221-242 95-116 (167)
70 1zx5_A Mannosephosphate isomer 37.9 26 0.00091 29.3 3.7 41 219-267 157-197 (300)
71 4diq_A Lysine-specific demethy 36.4 79 0.0027 28.5 6.7 39 218-257 226-264 (489)
72 2pfw_A Cupin 2, conserved barr 36.2 21 0.00071 24.5 2.4 22 221-242 73-94 (116)
73 1yhf_A Hypothetical protein SP 35.6 20 0.00068 24.5 2.2 22 221-242 79-100 (115)
74 3fjs_A Uncharacterized protein 35.4 15 0.00052 25.6 1.5 22 221-242 75-96 (114)
75 1fi2_A Oxalate oxidase, germin 34.7 23 0.00078 27.5 2.6 27 219-246 118-144 (201)
76 2o8q_A Hypothetical protein; c 33.7 18 0.00062 25.7 1.8 23 220-242 83-105 (134)
77 3es1_A Cupin 2, conserved barr 33.4 34 0.0012 26.1 3.4 30 221-252 119-149 (172)
78 1sef_A Conserved hypothetical 33.4 18 0.00062 29.7 1.9 35 220-254 221-256 (274)
79 1sfn_A Conserved hypothetical 32.6 19 0.00065 29.1 1.9 33 220-252 204-236 (246)
80 4gjz_A Lysine-specific demethy 30.7 22 0.00074 27.9 1.9 25 217-241 198-222 (235)
81 2k1g_A Lipoprotein SPR; soluti 30.6 18 0.00061 26.5 1.3 13 222-234 66-78 (135)
82 4e2q_A Ureidoglycine aminohydr 28.8 22 0.00076 29.3 1.7 34 220-253 225-258 (266)
83 1dgw_A Canavalin; duplicated s 28.3 59 0.002 24.6 4.0 24 219-242 82-105 (178)
84 3h7j_A Bacilysin biosynthesis 28.0 36 0.0012 27.2 2.8 26 220-246 184-209 (243)
85 1g6u_A Domain swapped dimer; d 27.7 82 0.0028 17.5 3.3 29 10-45 7-35 (48)
86 1sef_A Conserved hypothetical 27.0 35 0.0012 27.9 2.6 39 221-259 103-142 (274)
87 1rc6_A Hypothetical protein YL 26.6 27 0.00092 28.3 1.8 22 220-241 218-239 (261)
88 4h7l_A Uncharacterized protein 26.5 34 0.0012 25.8 2.2 21 221-241 87-107 (157)
89 3pbi_A Invasion protein; pepti 26.5 21 0.00073 28.4 1.1 11 223-233 158-168 (214)
90 3npf_A Putative dipeptidyl-pep 25.9 25 0.00086 29.4 1.5 38 223-260 220-290 (306)
91 1nx8_A CARC, carbapenem syntha 25.5 50 0.0017 26.7 3.3 26 9-34 30-56 (273)
92 3eat_X Pyoverdine biosynthesis 25.1 73 0.0025 26.3 4.3 32 10-41 47-81 (293)
93 1sq4_A GLXB, glyoxylate-induce 24.4 44 0.0015 27.4 2.8 39 219-258 229-268 (278)
94 1sq4_A GLXB, glyoxylate-induce 24.4 55 0.0019 26.9 3.3 39 221-259 109-148 (278)
95 2xlg_A SLL1785 protein, CUCA; 24.4 54 0.0018 26.4 3.2 28 220-248 102-129 (239)
96 2pyt_A Ethanolamine utilizatio 24.3 39 0.0013 24.3 2.2 22 220-241 93-114 (133)
97 3rns_A Cupin 2 conserved barre 23.6 54 0.0018 25.9 3.0 34 220-254 191-224 (227)
98 1otj_A Alpha-ketoglutarate-dep 23.5 57 0.002 26.6 3.3 31 5-35 25-60 (283)
99 3bcw_A Uncharacterized protein 23.5 41 0.0014 23.9 2.1 22 221-242 88-109 (123)
100 3lwc_A Uncharacterized protein 23.3 47 0.0016 23.3 2.4 29 221-250 78-106 (119)
101 3ne0_A Resuscitation promoting 23.2 36 0.0012 27.0 1.9 12 222-233 157-168 (214)
102 2vqa_A SLL1358 protein, MNCA; 23.1 57 0.0019 27.6 3.3 22 220-241 278-299 (361)
103 1vrb_A Putative asparaginyl hy 22.8 62 0.0021 27.5 3.5 27 217-243 215-241 (342)
104 2vqa_A SLL1358 protein, MNCA; 22.5 51 0.0017 27.9 2.9 31 220-250 96-126 (361)
105 3al5_A HTYW5, JMJC domain-cont 22.4 76 0.0026 26.8 3.9 40 218-260 238-277 (338)
106 1oih_A Putative alkylsulfatase 22.0 63 0.0021 26.6 3.3 36 4-39 34-75 (301)
107 2ozi_A Hypothetical protein RP 21.7 44 0.0015 22.6 1.9 35 221-256 60-94 (98)
108 2bdr_A Ureidoglycolate hydrola 21.7 82 0.0028 24.1 3.6 39 217-255 105-143 (175)
109 2d40_A Z3393, putative gentisa 21.6 61 0.0021 27.7 3.2 23 220-242 139-161 (354)
110 3s6e_A RNA-binding protein 39; 21.5 57 0.002 22.8 2.5 28 20-47 9-42 (114)
111 2qt7_A Receptor-type tyrosine- 20.9 1.2E+02 0.004 20.5 3.8 30 16-45 2-32 (91)
112 1juh_A Quercetin 2,3-dioxygena 20.8 55 0.0019 27.9 2.7 30 220-250 94-123 (350)
113 1y3t_A Hypothetical protein YX 20.7 60 0.0021 27.0 3.0 30 221-251 86-115 (337)
114 1y3t_A Hypothetical protein YX 20.7 60 0.002 27.0 2.9 23 220-242 257-279 (337)
115 3r1j_A Alpha-ketoglutarate-dep 20.5 1E+02 0.0035 25.5 4.3 37 4-40 28-70 (301)
116 2krx_A ASL3597 protein; struct 20.1 58 0.002 22.2 2.1 20 15-34 7-31 (94)
117 3oox_A Putative 2OG-Fe(II) oxy 20.0 1.2E+02 0.0042 25.1 4.7 37 9-45 24-61 (312)
No 1
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=100.00 E-value=3.8e-49 Score=341.62 Aligned_cols=265 Identities=48% Similarity=0.846 Sum_probs=220.8
Q ss_pred CCCCHHHHHhhhhccEEEecCCCCHHHHHHHHHHHHHHHccCCCC-C-ceeeecCcc--cc--cccchhcccccccceee
Q 024285 5 GNLNSDNLNFFNSQGYVVLESFASDEEIEAMRKQMDHLLDGFDCS-T-SSVFSTTNQ--QK--VTDDYFYESAEKISFFF 78 (269)
Q Consensus 5 ~~lt~~~~~~f~~~Gyvvl~~~l~~~~v~~l~~~~~~~~~~~~~~-~-~~~~~~~~~--~~--~~~~~~~~~~~~i~~~~ 78 (269)
..||++++++|+++|||||+++|++++|++++++++++++..... . ..+|.+... .. ..++||+.++..+++||
T Consensus 2 ~~Lt~e~~~~f~~dGyvvl~~~l~~e~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~y~l~~~~~~~~~~ 81 (291)
T 2opw_A 2 ACLSPSQLQKFQQDGFLVLEGFLSAEECVAMQQRIGEIVAEMDVPLHCRTEFSTQEEEQLRAQGSTDYFLSSGDKIRFFF 81 (291)
T ss_dssp CCCCHHHHHHHHHHSEEEETTSSCHHHHHHHHHHHHHHHHTCCCCGGGSSCCCSHHHHHHHHHHHHHHHHTTTTSEEEEE
T ss_pred CcCCHHHHHHHHhCCEEEecCCCCHHHHHHHHHHHHHHHhhcccccCCcceecccccchhhccccccccccCCCceeeec
Confidence 479999999999999999999999999999999999998774211 1 123432100 00 23578888888999999
Q ss_pred eccccCCCCCcccccccccccccccccccChHHHhhhcChhHHHHHHHhCCCCceeeccceeeecCCCCCCCCcccCCCC
Q 024285 79 EEKAFGDDGNLKQPKELSINKVGHALHELDPVFKKFSRSEKTSNLLHSLGYKRPVDIQSMYIFKQPGIGGEVVPHQDNSF 158 (269)
Q Consensus 79 ~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~l~~~~~~l~g~~~~~~~~~~~~~~p~~~~~~~wH~D~~~ 158 (269)
++++++++|.+..++...+|+++|.++..++.|.+++.+|+|.+++++|+|.++++++++++.|+|+.++.++||||..|
T Consensus 82 e~~~~~~~g~~~~~~~~~in~i~~~~~~~~~~f~~l~~~p~l~~~~~~l~g~~~~~~~~~~~~k~Pg~~~~~~wHqD~~~ 161 (291)
T 2opw_A 82 EKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFKSITHSFKVQTLARSLGLQMPVVVQSMYIFKQPHFGGEVSPHQDASF 161 (291)
T ss_dssp CTTSBCTTSCBSSCGGGSEEEEEECHHHHCHHHHHHHTCHHHHHHHHHHTCSSEEEEEEEEECCCTTTBCCEEEECGGGT
T ss_pred ccccccccCcccCchhhhhhhhhhHhhhhCHHHHHHhcCHHHHHHHHHhcCCCccchheeEEecCCCCCCCcCCeeCCcc
Confidence 99999999998877777788888878888999999999999999999998889999999999999998777899999999
Q ss_pred CccCCC-ceeEEeEeeeeccCCCceEEEEcCCCCCCCccceeeCC-C--Cc-cccCCCCCCCCCCeeeeeecCccEEEEe
Q 024285 159 LITEPS-TCTGLWLALEDATIINGCLWAIPGSHKNGLVRRFIRGE-E--GV-YFDRPPPSYDQNDFVPIEVKAGSLVLIH 233 (269)
Q Consensus 159 ~~~~~~-~~v~~~i~L~d~~~~~G~l~vipGSH~~~~~~~~~~~~-~--~~-~~~~~~~~~~~~~~v~~~~~~Gdvvl~~ 233 (269)
|+.+|. .++++||+|+|++++||||+|+||||+++....+.... + +. .+..++..++....+.++++|||++|||
T Consensus 162 ~~~~p~~~~~~~wi~L~d~~~~nG~l~~vPGSH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~aGd~~~f~ 241 (291)
T 2opw_A 162 LYTEPLGRVLGVWIAVEDATLENGCLWFIPGSHTSGVSRRMVRAPVGSAPGTSFLGSEPARDNSLFVPTPVQRGALVLIH 241 (291)
T ss_dssp SCEESSSCEEEEEEESSCBCTTTTCEEEETTCSSSCCSEEEEECC----CCEEEEECCCCCCGGGCEEECBCTTCEEEEE
T ss_pred cccCCCCceEEEEEEcccCCCCCCCEEEECCccCCCcccccccCCCCCCCcceeeccccCCCcCCeeecccCCCcEEEEc
Confidence 987776 89999999999999999999999999997655443321 1 11 1222223344457899999999999999
Q ss_pred CccccCCCCCCCCCCceEEEEEEEeCCCcccCCCCC
Q 024285 234 GDLIHQSFENQSSKSRHAYSLHVVETDGCRWSQENW 269 (269)
Q Consensus 234 ~~~~H~~~~n~s~~~R~~~~~~~~~~~~~~~~~~~~ 269 (269)
++++|+|++|.++.+|++++++|.+++++.|++++|
T Consensus 242 ~~~~H~s~~N~s~~~R~~~~~~~~~~~~~~~~~~~~ 277 (291)
T 2opw_A 242 GEVVHKSKQNLSDRSRQAYTFHLMEASGTTWSPENW 277 (291)
T ss_dssp TTCEEEECCBCSSSCCCEEEEEEEECTTCEECTTSS
T ss_pred CCceecCCCCCCCCceEEEEEEEEcCCCCccCcccc
Confidence 999999999999999999999999987789999998
No 2
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=100.00 E-value=3.6e-38 Score=275.46 Aligned_cols=232 Identities=21% Similarity=0.306 Sum_probs=173.0
Q ss_pred CCCCCCCCHHHHHhhhhccEEEecCCCCHHHHHHHHHHHHHHHccCCCCCceeeecCcccccccchhcccccccceeeec
Q 024285 1 MGLAGNLNSDNLNFFNSQGYVVLESFASDEEIEAMRKQMDHLLDGFDCSTSSVFSTTNQQKVTDDYFYESAEKISFFFEE 80 (269)
Q Consensus 1 ~~~~~~lt~~~~~~f~~~Gyvvl~~~l~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 80 (269)
|.....||++++++|+++|||||+++|++++|+++++++...+.+... ..|...
T Consensus 4 ~~~~~~Lt~e~~~~f~~dGyvvl~~~l~~e~v~~l~~~~~~~l~~~~~---~~~~~~----------------------- 57 (313)
T 2fct_A 4 MSKKFALTAEQRASFEKNGFIGPFDAYSPEEMKETWKRTRLRLLDRSA---AAYQDL----------------------- 57 (313)
T ss_dssp --CTTCCCHHHHHHHHHHSEEEEEESSCHHHHHHHHHHHHHHHTCCTT---CSCCCC-----------------------
T ss_pred ccccCCCCHHHHHHHHhCCEEECCCCCCHHHHHHHHHHHHHHHhcccc---cccccc-----------------------
Confidence 455678999999999999999999999999999999999877633211 123210
Q ss_pred cccCCCCCcccccccccccccccccccChHHHhhhcChhHHHHHHHhCCCCceeeccceeeecCCCCCCCCcccCCCCCc
Q 024285 81 KAFGDDGNLKQPKELSINKVGHALHELDPVFKKFSRSEKTSNLLHSLGYKRPVDIQSMYIFKQPGIGGEVVPHQDNSFLI 160 (269)
Q Consensus 81 ~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~l~~~~~~l~g~~~~~~~~~~~~~~p~~~~~~~wH~D~~~~~ 160 (269)
++++..+.. ..+ ..+..++.|.+++.+|++.+++++|+|.++++++++++.|+|+.+. ++||||..||.
T Consensus 58 ~~~~~~~~~-----~~~-----~~~~~~~~~~~~~~~p~l~~~~~~llG~~~~~~~~~~~~k~Pg~~~-~~wHqD~~~~~ 126 (313)
T 2fct_A 58 DAISGGTNI-----ANY-----DRHLDDDFLASHICRPEICDRVESILGPNVLCWRTEFFPKYPGDEG-TDWHQADTFAN 126 (313)
T ss_dssp CC----CGG-----GGB-----CGGGTCHHHHHHTTCHHHHHHHHHHHCSCEEEEEEEEEEECTTCCE-ECCBCCSSSCT
T ss_pred cccCCccch-----hcc-----ccccccHHHHHHHcChHHHHHHHHHcCCCeEeeeeeEEEeCCCCCC-CCccccccccc
Confidence 001111100 001 1234578999999999999999999988888999999999998665 69999999876
Q ss_pred cC--CC----------ceeEEeEeeeeccCCCceEEEEcCCCCCCCccc---eeeCC--------CC--ccc---c----
Q 024285 161 TE--PS----------TCTGLWLALEDATIINGCLWAIPGSHKNGLVRR---FIRGE--------EG--VYF---D---- 208 (269)
Q Consensus 161 ~~--~~----------~~v~~~i~L~d~~~~~G~l~vipGSH~~~~~~~---~~~~~--------~~--~~~---~---- 208 (269)
.+ |. .++++||+|+|++++||||+|+||||++..... +.... .+ ..| +
T Consensus 127 ~~g~p~~~~p~~~~~~~~l~~wiaL~D~~~enG~l~~vPGSH~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l 206 (313)
T 2fct_A 127 ASGKPQIIWPENEEFGGTITVWTAFTDANIANGCLQFIPGTQNSMNYDETKRMTYEPDANNSVVKDGVRRGFFGYDYRQL 206 (313)
T ss_dssp TTSSCSEECCTTSCCCSCEEEEEESSCBCTTBTCEEEETTCTTSCCBCTTSCCCCCTTTCSSCEETTEEEEBTTBCGGGG
T ss_pred cCCCccccccccccccCeEEEEEEeccCCccCCCEEEEcCCCcCCccccccccccChhhhhhhhhccccccccccchhhh
Confidence 44 21 579999999999999999999999999864321 10000 01 001 0
Q ss_pred CCCCCC--CCCCeeeeeecCccEEEEeCccccCCCCCC--CCCCceEEEEEEEeCCCcccCCCCC
Q 024285 209 RPPPSY--DQNDFVPIEVKAGSLVLIHGDLIHQSFENQ--SSKSRHAYSLHVVETDGCRWSQENW 269 (269)
Q Consensus 209 ~~~~~~--~~~~~v~~~~~~Gdvvl~~~~~~H~~~~n~--s~~~R~~~~~~~~~~~~~~~~~~~~ 269 (269)
..++.+ +....+.++++|||++|||++++|+|++|. ++.+|+++.++|++.+...|...+|
T Consensus 207 ~~~~~~~~~~~~~v~~~~~aGd~v~f~~~l~H~s~~N~~ss~~~R~a~~~~y~~~~~~~~~~~~~ 271 (313)
T 2fct_A 207 QIDENWKPDEASAVPMQMKAGQFIIFWSTLMHASYPHSGESQEMRMGFASRYVPSFVHVYPDSDH 271 (313)
T ss_dssp BSSTTCCCCGGGCEEECBCTTEEEEEETTSEEEECCBCSSSSSCEEEEEEEEEETTSEESTTCSE
T ss_pred ccccccCCccCceeEeeeCCceEEEEeCCceeeCCCCCCCCCCceEEEEEEEECCCceEcCCCCc
Confidence 001111 235679999999999999999999999999 7889999999999998778988877
No 3
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=100.00 E-value=3.8e-38 Score=274.69 Aligned_cols=235 Identities=24% Similarity=0.397 Sum_probs=169.9
Q ss_pred CCCCCHHHHHhhhhccEEEecCCCCHHHHHHHHHHHHHHHccCCCC-CceeeecCcccccccchhcccccccceeeeccc
Q 024285 4 AGNLNSDNLNFFNSQGYVVLESFASDEEIEAMRKQMDHLLDGFDCS-TSSVFSTTNQQKVTDDYFYESAEKISFFFEEKA 82 (269)
Q Consensus 4 ~~~lt~~~~~~f~~~Gyvvl~~~l~~~~v~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 82 (269)
+..||++++++|+++|||||+++|++++|++++++++++++..... ....+.. +. +..
T Consensus 20 ~~~Lt~e~~~~f~~dGyvvl~~~l~~e~v~~l~~~~~~~~~~~~~~~~~~~~~~-----------------~~--~~~-- 78 (308)
T 2a1x_A 20 NNVLTLEQRKFYEENGFLVIKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRD-----------------VT--ISK-- 78 (308)
T ss_dssp C--CCSTHHHHHHHHSEEEETTCSCHHHHHHHHHHHHHHHTTSCCCSSCEEECC-----------------EE--ECC--
T ss_pred CCCCCHHHHHHHHhCCEEEccCCCCHHHHHHHHHHHHHHHhccccCCCcccccc-----------------cc--ccc--
Confidence 3569999999999999999999999999999999999988754211 1111110 00 000
Q ss_pred cCCCCCcccccccccccccccccccChHHHhhhcChhHHHHHHHhCCCCceeeccceeeecCCCCCC---CCcccCCCCC
Q 024285 83 FGDDGNLKQPKELSINKVGHALHELDPVFKKFSRSEKTSNLLHSLGYKRPVDIQSMYIFKQPGIGGE---VVPHQDNSFL 159 (269)
Q Consensus 83 ~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~l~~~~~~l~g~~~~~~~~~~~~~~p~~~~~---~~wH~D~~~~ 159 (269)
+. ..+....++++++ +..++.|.+++.+|+|.+++++|+|.++++++++++.|+|+.++. ++||||..||
T Consensus 79 ---~~--~~~~~~~~~~~~~--~~~~~~~~~l~~~p~l~~~~~~llG~~~~~~~~~~~~k~P~~g~~~~~~~wHqD~~~~ 151 (308)
T 2a1x_A 79 ---SE--YAPSEKMITKVQD--FQEDKELFRYCTLPEILKYVECFTGPNIMAMHTMLINKPPDSGKKTSRHPLHQDLHYF 151 (308)
T ss_dssp ---CE-------EECCEEEC--CTTSHHHHHHHHCHHHHHHHHHHHCSSEEEEEEEEEEECCC--------CCBCGGGGC
T ss_pred ---cc--cCchHHHHhhhhh--hhhCHHHHHHHhCHHHHHHHHHhcCCCcceecceEEEcCCCCCCCccCCCCccCCccc
Confidence 00 0011122334432 245799999999999999999999888888899999999987643 5899999999
Q ss_pred ccCCC-ceeEEeEeeeeccCCCceEEEEcCCCCCCCcccee-eCCCCc--cccCCCCCCC-CCCeeeeeecCccEEEEeC
Q 024285 160 ITEPS-TCTGLWLALEDATIINGCLWAIPGSHKNGLVRRFI-RGEEGV--YFDRPPPSYD-QNDFVPIEVKAGSLVLIHG 234 (269)
Q Consensus 160 ~~~~~-~~v~~~i~L~d~~~~~G~l~vipGSH~~~~~~~~~-~~~~~~--~~~~~~~~~~-~~~~v~~~~~~Gdvvl~~~ 234 (269)
+.+|. .++++||+|+|++++||||+|+||||+.+..+... ...++. .|... +.+. ....+.++++|||++|||+
T Consensus 152 ~~~p~~~~v~~wiaL~D~~~enG~l~~vPGSH~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~aGd~vlf~~ 230 (308)
T 2a1x_A 152 PFRPSDLIVCAWTAMEHISRNNGCLVVLPGTHKGSLKPHDYPKWEGGVNKMFHGI-QDYEENKARVHLVMEKGDTVFFHP 230 (308)
T ss_dssp CEECGGGEEEEEEESSCBCTTBTCEEECTTGGGSCCCCCCC-----------CCC-CC-CCCSCCEEECBCTTCEEEECT
T ss_pred cCCCCCCeEEEEEEeeccCCCCCcEEEEcCCCCCccccccccccccCccccccCC-ccccccCCeEEccCCCccEEEECC
Confidence 87764 78999999999999999999999999997654311 111111 11111 1222 2567999999999999999
Q ss_pred ccccCCCCCCCCCCceEEEEEEEeCCCcccCCCC
Q 024285 235 DLIHQSFENQSSKSRHAYSLHVVETDGCRWSQEN 268 (269)
Q Consensus 235 ~~~H~~~~n~s~~~R~~~~~~~~~~~~~~~~~~~ 268 (269)
+++|+|++|.++.+|++++++|.+.+ +.|..+.
T Consensus 231 ~~~H~s~~N~s~~~R~~~~~~y~~~~-~~y~~~~ 263 (308)
T 2a1x_A 231 LLIHGSGQNKTQGFRKAISCHFASAD-CHYIDVK 263 (308)
T ss_dssp TCCEEECCBCSSSCEEEEEEEEEETT-CEECCCT
T ss_pred CccccCCCCCCCCceEEEEEEEECCC-ceEccCC
Confidence 99999999999999999999999985 7787643
No 4
>3emr_A ECTD; double stranded beta helix, oxidoreductase; HET: MSE; 1.85A {Virgibacillus salexigens}
Probab=100.00 E-value=3.1e-39 Score=281.20 Aligned_cols=219 Identities=22% Similarity=0.255 Sum_probs=166.7
Q ss_pred CCCCHHHHHhhhhccEEEecCCCCHHHHHHHHHHHHHHHccCCCCCc--eeeecCcccccccchhcccccccceeeeccc
Q 024285 5 GNLNSDNLNFFNSQGYVVLESFASDEEIEAMRKQMDHLLDGFDCSTS--SVFSTTNQQKVTDDYFYESAEKISFFFEEKA 82 (269)
Q Consensus 5 ~~lt~~~~~~f~~~Gyvvl~~~l~~~~v~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 82 (269)
..||++|+++|+++|||||+++|++++|++++++++++++....... .++ ++
T Consensus 33 ~~LT~eqi~~f~~dGyvvi~~~ls~eev~~lr~~i~~~~~~~~~~~~~~~~~------------------------~~-- 86 (310)
T 3emr_A 33 APITKEQLDSYEKNGFLQIKNFFSEDEVIDMQKAIFELQDSIKDVASDKVIR------------------------EP-- 86 (310)
T ss_dssp SSSCHHHHHHHHHHSEEEETTCSCHHHHHHHHHHHHHHHHHTTTCCCTTEEE------------------------CT--
T ss_pred CCCCHHHHHHHHhCCEEEccCCCCHHHHHHHHHHHHHHHhcccccCCcccee------------------------cC--
Confidence 68999999999999999999999999999999999999876532110 111 00
Q ss_pred cCCCCCcccccccccccccccccccChHHHhhhcChhHHHHHHHhCCCCceeeccceeeecCCCCCCCCcccCCCCCccC
Q 024285 83 FGDDGNLKQPKELSINKVGHALHELDPVFKKFSRSEKTSNLLHSLGYKRPVDIQSMYIFKQPGIGGEVVPHQDNSFLITE 162 (269)
Q Consensus 83 ~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~l~~~~~~l~g~~~~~~~~~~~~~~p~~~~~~~wH~D~~~~~~~ 162 (269)
.|. .+.++ ..++..++.|.+++.+|+|.+++++|+|.+++++++++++|+|+.+..++||||..||+.+
T Consensus 87 ---~~~-------~~r~~-~~~~~~~~~f~~l~~~p~l~~i~~~llG~~~~l~~s~~~~k~p~~g~~~~wHqD~~~~~~~ 155 (310)
T 3emr_A 87 ---ESN-------DIRSI-FHVHQDDNYFQDVANDKRILDIVRHLLGSDVYVHQSRINYKPGFKGKEFDWHSDFETWHVE 155 (310)
T ss_dssp ---TTC-------CEEEE-ECHHHHCHHHHHHHTCHHHHHHHHHHHTSCEEEEEEEEECCCTTCCCCEEEECHHHHHHHH
T ss_pred ---CCc-------ceeEE-eehhhccHHHHHHHhChHHHHHHHHHcCCceEEEeeEEEEcCCCCCCCCCcCCCCcccccc
Confidence 011 01111 1245678999999999999999999998899988999999999877778999999988543
Q ss_pred ---C-CceeEEeEeeeeccCCCceEEEEcCCCCCCCccce-eeC---CC---CccccCCCCC-----CCCCC-eeeeeec
Q 024285 163 ---P-STCTGLWLALEDATIINGCLWAIPGSHKNGLVRRF-IRG---EE---GVYFDRPPPS-----YDQND-FVPIEVK 225 (269)
Q Consensus 163 ---~-~~~v~~~i~L~d~~~~~G~l~vipGSH~~~~~~~~-~~~---~~---~~~~~~~~~~-----~~~~~-~v~~~~~ 225 (269)
| ..++++||+|+|++++||||+|+||||++.....- ... .. +..+..++.+ .+... .+.++++
T Consensus 156 ~g~P~~~~v~~wiaL~D~t~enG~l~viPGSH~~~~~~~g~~p~~~~~~~l~~~~~g~p~~~~~~~~~~~~~~~v~~~~~ 235 (310)
T 3emr_A 156 DGMPRMRAISVSIALSDNYSFNGPLMLIPGSHNYFVSCVGETPDNNYKESLKKQKLGVPDEESLRELTRIGGGISVPTGK 235 (310)
T ss_dssp HCCCSSCEEEEEEESSCBCSSSCCCEECTTGGGEEEECCC-----------------CCCHHHHHHHHHHHTSCBCCCBS
T ss_pred CCCcccceEEEEEEecCCCCcCCCEEEEeCCCCCcccccccccccccccccccccccCCCHHHHHHHHhccCceEEeeeC
Confidence 3 47899999999999999999999999998632100 000 00 0001111100 00113 7889999
Q ss_pred CccEEEEeCccccCCCCCCCCCCceEEEEEEEeCC
Q 024285 226 AGSLVLIHGDLIHQSFENQSSKSRHAYSLHVVETD 260 (269)
Q Consensus 226 ~Gdvvl~~~~~~H~~~~n~s~~~R~~~~~~~~~~~ 260 (269)
|||++|||++++|+|++|.|+.+|++++++|.+.+
T Consensus 236 aGdvl~f~~~~~H~s~~N~S~~~R~~l~~~y~~~~ 270 (310)
T 3emr_A 236 AGSVTLFESNTMHGSTSNITPYPRNNLFMVYNSVK 270 (310)
T ss_dssp TTCEEEEETTCCEEECCCCSSCCCCEEEEEEEEGG
T ss_pred CceEEEEeCCceecCCCCCCCCCeEEEEEEEeCCc
Confidence 99999999999999999999999999999999986
No 5
>3gja_A CYTC3; halogenase, beta barrel, biosynthetic protein; 2.20A {Streptomyces} PDB: 3gjb_A*
Probab=100.00 E-value=1e-37 Score=272.67 Aligned_cols=223 Identities=18% Similarity=0.236 Sum_probs=162.2
Q ss_pred CCCCCHHHHHhhhhccEEEecCCCCHHHHHHHHHHHHHHHccCCCCCceeeecCcccccccchhcccccccceeeecccc
Q 024285 4 AGNLNSDNLNFFNSQGYVVLESFASDEEIEAMRKQMDHLLDGFDCSTSSVFSTTNQQKVTDDYFYESAEKISFFFEEKAF 83 (269)
Q Consensus 4 ~~~lt~~~~~~f~~~Gyvvl~~~l~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 83 (269)
+..||++|+++|+++||++|+++|++++++++++++++.+..... ..|..
T Consensus 9 ~~~Lt~eq~~~f~~~Gyv~i~~~l~~~~v~~l~~~i~~~l~~~~~---~~~~~--------------------------- 58 (319)
T 3gja_A 9 NFTFSPEEVARFERDGYIGPVKIFEPEEMTRRWNIIRRQLLDRSL---AIYPD--------------------------- 58 (319)
T ss_dssp CCCCCHHHHHHHHHHSEEEEEESSCHHHHHHHHHHHHHHHHCCTT---CSSCS---------------------------
T ss_pred CCCCCHHHHHHHHHCCEEECcCCCCHHHHHHHHHHHHHHhhcCcc---ccccC---------------------------
Confidence 568999999999999999999999999999999999986643211 11210
Q ss_pred CCCCCcccccccccccccccccccChHHHhhhcChhHHHHHHHhCCCCceeeccceeeecCCCCCCCCcccCCCCCccC-
Q 024285 84 GDDGNLKQPKELSINKVGHALHELDPVFKKFSRSEKTSNLLHSLGYKRPVDIQSMYIFKQPGIGGEVVPHQDNSFLITE- 162 (269)
Q Consensus 84 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~l~~~~~~l~g~~~~~~~~~~~~~~p~~~~~~~wH~D~~~~~~~- 162 (269)
..|.. +..+ ..++..++.|.+++.+|+|.+++++|+|.++++++++++.|+|+.+. ++||||..|+..+
T Consensus 59 -~~g~~-------~~~~-~~~~~~~~~f~~l~~~p~l~~~~~~llG~~~~~~~s~~~~k~Pg~~~-~~wHqD~~y~~~~g 128 (319)
T 3gja_A 59 -SNGKA-------NISN-YDRHLDIDLLAEHIMRPEIVDRVGSLIGRNLLCWRSEFFPKYQGDEG-TDWHQAATFAHATG 128 (319)
T ss_dssp -CSSHH-------HHTT-TTGGGTCHHHHHHHHCHHHHHHHHHHHCSSEEEEEEEEEEECTTCCC-EEEEEECCBCTTTC
T ss_pred -CCccc-------hhhh-hhhcccCHHHHHHHcChHHHHHHHHHcCCceEEeeeeEeecCCCCCC-CCcccCCcccccCC
Confidence 00100 0000 12456789999999999999999999988889999999999999876 7999998886533
Q ss_pred ------C------C--ceeEEeEeeeeccCCCceEEEEcCCCCCCCccce----eeCC-------CC--ccccC------
Q 024285 163 ------P------S--TCTGLWLALEDATIINGCLWAIPGSHKNGLVRRF----IRGE-------EG--VYFDR------ 209 (269)
Q Consensus 163 ------~------~--~~v~~~i~L~d~~~~~G~l~vipGSH~~~~~~~~----~~~~-------~~--~~~~~------ 209 (269)
| . .++++||+|+|++++||||+|+||||+++..+.. +..+ ++ ..|..
T Consensus 129 ~p~~~~P~~~~~p~~~~~v~~wiaL~d~t~enG~l~vvPGSH~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~~~d~~~l 208 (319)
T 3gja_A 129 KPQIIWPSDEGRPAFIGTITVWTAFTHSTEQNGCLQLMPGTHTSMNYDESKGMDYDADAINQREKDGIKRGFFGYDYRSL 208 (319)
T ss_dssp CBSEECCCCSSSCEECCCEEEEEESSCBCTTTTCEEECSCC---CEECCC------------------------------
T ss_pred CccccCccccccccccceEEEEEEeccCCCcCcCEEEEeCCccCcccCcccccccCchhhhhhccccccccccccchhhh
Confidence 2 1 3699999999999999999999999999854211 0000 00 01110
Q ss_pred ---CCCCCCCCCeeeeeecCccEEEEeCccccCCCCCC--CCCCceEEEEEEEeCCCcccCC
Q 024285 210 ---PPPSYDQNDFVPIEVKAGSLVLIHGDLIHQSFENQ--SSKSRHAYSLHVVETDGCRWSQ 266 (269)
Q Consensus 210 ---~~~~~~~~~~v~~~~~~Gdvvl~~~~~~H~~~~n~--s~~~R~~~~~~~~~~~~~~~~~ 266 (269)
++...+..+.+.++|+|||+||||++++|+|++|. ++.+|++++++|.+.+...|+.
T Consensus 209 ~~~~~~~~~~~~~v~~~~~aGd~v~f~~~~~H~s~~N~~ts~~~R~a~~~~y~~~~~~~~~~ 270 (319)
T 3gja_A 209 QKDPDWKPDESQAYPMVLKPGEAVIFWSNTMHASLPHTGSKTDYRMGFAARYVPTQVQVYPG 270 (319)
T ss_dssp ------------CCBCCBCTTEEEEEETTSCEEECCCCSCTTCCEEEEEEEEEETTSEESCS
T ss_pred ccccccccccCceeEeeECCCeEEEEcCCccccCCCCCCCCCCcEEEEEEEEECCCceECCC
Confidence 00012235788999999999999999999999999 8899999999999997545543
No 6
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=100.00 E-value=3.7e-34 Score=247.14 Aligned_cols=220 Identities=17% Similarity=0.204 Sum_probs=152.1
Q ss_pred CCCHHH--HHhhhhccEEEecCCCCHHHHHHHHHHHHHHHccCCCCCceeeecCcccccccchhcccccccceeeecccc
Q 024285 6 NLNSDN--LNFFNSQGYVVLESFASDEEIEAMRKQMDHLLDGFDCSTSSVFSTTNQQKVTDDYFYESAEKISFFFEEKAF 83 (269)
Q Consensus 6 ~lt~~~--~~~f~~~Gyvvl~~~l~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 83 (269)
.||+++ +++|+++|||||+++|++++|++++++++++++.......... .+.+++ +.+++
T Consensus 17 ~ls~~~~~~~~f~~dGyvvl~~~l~~e~v~~l~~~~~~~~~~~~~~~p~~~--------~~~~~~------~~~~~---- 78 (288)
T 2rdq_A 17 LLGDRAALDSFYEEHGYLFLRNVLDRDLVKTVAEQMREGLVALGAADPHAT--------LEELTI------DSFES---- 78 (288)
T ss_dssp GTTCHHHHHHHHHHHSEEEECSCSCHHHHHHHHHHHHHHHHHHSCCCTTCC--------TTTCCC------SCSTT----
T ss_pred ccCCHHHHHHHHHhCCEEEEeCCCCHHHHHHHHHHHHHHHHhcCCCCCCCC--------cchhhh------hhhcc----
Confidence 467665 9999999999999999999999999999998865311000000 000000 00000
Q ss_pred CCCCCcccccccccccccccccccChHHHhhhcChhHHHHHHHhCCCCceeeccceeeecC--------CCCCCCCcccC
Q 024285 84 GDDGNLKQPKELSINKVGHALHELDPVFKKFSRSEKTSNLLHSLGYKRPVDIQSMYIFKQP--------GIGGEVVPHQD 155 (269)
Q Consensus 84 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~l~~~~~~l~g~~~~~~~~~~~~~~p--------~~~~~~~wH~D 155 (269)
+ .. + .+...+.|.+++.+|+|.+++++|+|.+++++.+.++.+.| +.+..++||||
T Consensus 79 ---~-----~~--~------~~~~~~~~~~l~~~p~l~~~~~~llG~~~~l~~~~~~~~~p~~~~~k~p~~g~~~~wHqD 142 (288)
T 2rdq_A 79 ---V-----DE--V------AMHDYVKYDAFWNNPSTIKVFEQVFGEPVFVFLSTTIRYYPSQAGSEEPSFHYLTPFHQD 142 (288)
T ss_dssp ---S-----CH--H------HHHHHCCHHHHHTSHHHHHHHHHHHSSCEEEEEEEEEEEECCCTTCSSCCCTTSCCSBCH
T ss_pred ---c-----cc--c------cccchHHHHHHHcCHHHHHHHHHHhCCCceeeeeeeeeecCCcccccccCcCCCcCcccc
Confidence 0 00 0 00112278999999999999999988887665544443233 33566899999
Q ss_pred CCCCccCCCceeEEeEeeeeccCCCceEEEEcCCCCCCCcccee----eCCCCc-cccCCCCCCCCCCeeeeeecCccEE
Q 024285 156 NSFLITEPSTCTGLWLALEDATIINGCLWAIPGSHKNGLVRRFI----RGEEGV-YFDRPPPSYDQNDFVPIEVKAGSLV 230 (269)
Q Consensus 156 ~~~~~~~~~~~v~~~i~L~d~~~~~G~l~vipGSH~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~v~~~~~~Gdvv 230 (269)
..|+...+ .++++||+|+|++++||||+|+||||+++...... +..+.. ..............+.++++|||++
T Consensus 143 ~~~~~~~~-~~v~~wiaL~d~~~enG~l~vvPGSH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~aGdv~ 221 (288)
T 2rdq_A 143 GFYIGPNQ-DFRTFWIPLIRTTRESGGVALADGSHRRGKRDHVLNESFRRFGHPVRGIPPTEVSEDEHLLHSPMEPGDIL 221 (288)
T ss_dssp HHHSCSCC-CCEEEEEESSCCCTTTCEEEEETTTTSSCCCCCEEEEEEEETTEEEEECCGGGSCTTSCEECCCCCTTCEE
T ss_pred ccccCCCC-CeEEEEEECCCCCccCCcEEEEeCCccccccccccchhhhccCcccccCCCccccccCceeecccCCCCEE
Confidence 98875433 68999999999999999999999999998654311 111100 0000001122345789999999999
Q ss_pred EEeCccccCCCCCCCCC---CceEEEEEEEeCC
Q 024285 231 LIHGDLIHQSFENQSSK---SRHAYSLHVVETD 260 (269)
Q Consensus 231 l~~~~~~H~~~~n~s~~---~R~~~~~~~~~~~ 260 (269)
|||++++|+|++|.|+. .|+++.++|.+.+
T Consensus 222 lf~~~~~H~s~~N~s~~~R~~R~s~~~~~~~~~ 254 (288)
T 2rdq_A 222 LFHAHMCHKSIPNLSKDPRLMRMSMDTRVQPAK 254 (288)
T ss_dssp EEETTCCEEEECCCCCTTCCCEEEEEEEEEETT
T ss_pred EEeCCceecCCCCCCCCccceEEEEEEEEecCc
Confidence 99999999999999974 4689999999985
No 7
>3nnf_A CURA; non-HAEM Fe(II)/alpha-ketoglutarate-dependent enzymes, catal cryptic chlorination, biosynthetic protein; HET: AKG; 2.20A {Lyngbya majuscula} PDB: 3nnj_A 3nnl_A* 3nnm_A
Probab=99.96 E-value=3.3e-29 Score=208.60 Aligned_cols=224 Identities=17% Similarity=0.201 Sum_probs=150.2
Q ss_pred CCCCCHHHHHh----hhhccEEEecCCCCHHHHHHHHHHHHHHHccCCCCCceeeecCcccccccchhcccccccceeee
Q 024285 4 AGNLNSDNLNF----FNSQGYVVLESFASDEEIEAMRKQMDHLLDGFDCSTSSVFSTTNQQKVTDDYFYESAEKISFFFE 79 (269)
Q Consensus 4 ~~~lt~~~~~~----f~~~Gyvvl~~~l~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 79 (269)
++.|+.+|+++ |+++||++|+++|++++|++++++++++-++.......+ .|+
T Consensus 22 ~~~l~~~qve~~~~~fE~eGYLvlk~vFs~eEv~~l~~el~~~~~d~~~~k~~~-------------------~i~---- 78 (344)
T 3nnf_A 22 SNAMNREQVEQLKQEYEEKGYCQIKKIFDFSAIKTIQKTLDQAKQESQISKEKV-------------------TLK---- 78 (344)
T ss_dssp ---CCSHHHHHHHHHHHHHSEEEETTCSCHHHHHHHHHHHHHHHHHCCCCSHHH-------------------HHH----
T ss_pred cCcCCHHHHHHHHhhhccCceEEEcCCCCHHHHHHHHHHHHHHhhchhhhcccc-------------------eec----
Confidence 56799999999 999999999999999999999999999866543211100 000
Q ss_pred ccccCCCCCcccccccccccccccccccChHHHhh--hcChhHHHHHHHhCCCCceeeccceeeecCCCCCCCCcccCCC
Q 024285 80 EKAFGDDGNLKQPKELSINKVGHALHELDPVFKKF--SRSEKTSNLLHSLGYKRPVDIQSMYIFKQPGIGGEVVPHQDNS 157 (269)
Q Consensus 80 ~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~p~l~~~~~~l~g~~~~~~~~~~~~~~p~~~~~~~wH~D~~ 157 (269)
++|. ..+..+ .|+.+..-.++ ...+++++++.+|+|++.++.+++.+.+.||. ..++||+|..
T Consensus 79 -----~~~s------~~lrs~---~H~~~~f~~h~~s~l~~rll~vl~~LlG~el~i~qs~~fe~kPG~-KGFpWH~D~~ 143 (344)
T 3nnf_A 79 -----LGGI------DDIDTN---DHAYDLVKYDFVSSFIQEKLALLNYITGKNLMIMHNALFSVEPNH-KGLPWHVGVG 143 (344)
T ss_dssp -----TTSC------CCCBCS---EEEECSSCHHHHHHHHGGGHHHHHHHHTSCEEEEEEEEEEECBTC-CBSCSBCTTT
T ss_pred -----CCCc------cchhcc---cccchhHHHHHHHHHHHHHHHHHHHHhCCceeeeecceEeeCCCC-CCCCceeccc
Confidence 0000 001111 11111111122 12238999999999999999999988888884 4589999977
Q ss_pred CCcc--CCCceeEEeEeeeeccC-CCceEEEEcCCCCCCCccce---------eeCCC-Cc---cc-cC---C--CC--C
Q 024285 158 FLIT--EPSTCTGLWLALEDATI-INGCLWAIPGSHKNGLVRRF---------IRGEE-GV---YF-DR---P--PP--S 213 (269)
Q Consensus 158 ~~~~--~~~~~v~~~i~L~d~~~-~~G~l~vipGSH~~~~~~~~---------~~~~~-~~---~~-~~---~--~~--~ 213 (269)
++.. .+..++++||+|+++++ .||||.++|+|+..+....+ +..+. .. .| .. . .+ .
T Consensus 144 ~F~~~~~eD~a~S~WIpLd~i~~e~nGGM~~VP~s~~Sgs~~y~~~d~~~~~~Lk~qe~~~sLee~la~~~gi~~~~~~~ 223 (344)
T 3nnf_A 144 SFSFTKTEDFGASIWIPLDKITKEHRGGMQYVSTKIFPGQFYYSVFDLHLKNNIKWDESQGDLNEYVANANTIYNKITED 223 (344)
T ss_dssp TTTTBCTTSCEEEEEEESSCBCTTTBCSEEEECTTTCCTHHHHHHHHHHHHHHTTCCGGGCCHHHHHHHCCCHHHHCCHH
T ss_pred ccccccCCCCeEEEEEECCCCCccCCCceEEecCcccCcceeeecchHHHHHHhhccCCcccHHHHHHhhcCcccCcccc
Confidence 3322 23489999999999995 99999999977766632111 11111 00 00 00 0 01 0
Q ss_pred -C---CCCCeeeeeecCccEEEEeCccccCCCCCCC--CCCceEEEEEEEeCCCcccCC
Q 024285 214 -Y---DQNDFVPIEVKAGSLVLIHGDLIHQSFENQS--SKSRHAYSLHVVETDGCRWSQ 266 (269)
Q Consensus 214 -~---~~~~~v~~~~~~Gdvvl~~~~~~H~~~~n~s--~~~R~~~~~~~~~~~~~~~~~ 266 (269)
+ -+...+...|+|||+|+||.+++||+.++.+ ...|+++.+||... ++.|+.
T Consensus 224 ~i~~~le~~~~ewd~epGDav~F~~~tlHga~plgn~~~~rRRAfS~RfvGD-Daryd~ 281 (344)
T 3nnf_A 224 VIDYTIKDGYEEDEYNLGDAFFFNKYVLHQSVPLKPGLHKLRRAFVIRLVDY-DTRVDE 281 (344)
T ss_dssp HHHHHHTTCEEECCBCTTCEEEEETTCEEEECCBCTTSCSCEEEEEEEEEET-TCBBCH
T ss_pred ccchhhhhhhccccCCCCcEEEEecceeecCCCCCCCCccceeEEEEEEecC-cceehH
Confidence 0 0246788999999999999999999996544 45788999999997 588875
No 8
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=99.59 E-value=1.5e-14 Score=128.21 Aligned_cols=223 Identities=18% Similarity=0.194 Sum_probs=140.0
Q ss_pred CCCCHHHHHhhhhccEEEecCCCCHHHHHHHHHHHHHHHccCCCCCceeeecCcccccccchhcccccccceeeeccccC
Q 024285 5 GNLNSDNLNFFNSQGYVVLESFASDEEIEAMRKQMDHLLDGFDCSTSSVFSTTNQQKVTDDYFYESAEKISFFFEEKAFG 84 (269)
Q Consensus 5 ~~lt~~~~~~f~~~Gyvvl~~~l~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 84 (269)
..+|+++++.+++.||+||+|+|+++++..+.+++.+.++..... ..+.. ..++||
T Consensus 112 ~~~s~~~~~~ir~rG~vVIRgvvp~e~A~~~~~~~~~yl~~n~~~--~t~~~-----p~d~~~----------------- 167 (461)
T 2dbn_A 112 GHVTAEQREQIKRRGCAVIKGHFPREQALGWDQSMLDYLDRNRFD--EVYKG-----PGDNFF----------------- 167 (461)
T ss_dssp TCCCHHHHHHHHHHSEEEEETSSCHHHHHHHHHHHHHHHHHTTHH--HHC------------------------------
T ss_pred CCCCHHHHHHHHhccEEEECCCCCHHHHHHHHHHHHHHHHhCCCc--ccccC-----cccccc-----------------
Confidence 458999999999999999999999999999999999998764210 01100 001111
Q ss_pred CCCCcccccccccccccccccccChHHHhhhcChhHHHHHH---HhCCC--Cceee---------ccceeeecCCCCC-C
Q 024285 85 DDGNLKQPKELSINKVGHALHELDPVFKKFSRSEKTSNLLH---SLGYK--RPVDI---------QSMYIFKQPGIGG-E 149 (269)
Q Consensus 85 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~l~~~~~---~l~g~--~~~~~---------~~~~~~~~p~~~~-~ 149 (269)
|++-. ....+-.+ --++.-.+.-+||.|+++.+ +|-.. +...+ -+.+.+++||..+ .
T Consensus 168 --~~l~~-~~p~~y~~-----Yws~~Q~~AR~hP~v~~aq~fln~LW~~~s~~~~~vs~d~~~~YaDR~riR~Pg~~~~~ 239 (461)
T 2dbn_A 168 --GTLSA-SRPEIYPI-----YWSQAQMQARQSEEMANAQSFLNRLWTFESDGKQWFNPDVSVIYPDRIRRRPPGTTSKG 239 (461)
T ss_dssp ---------CCEEECC-----CCCHHHHHHHTSHHHHHHHHHHHTTSBCEETTEECCEEEEECCCCCCEEECCTTCCBCC
T ss_pred --ccCCC-CCCcEEEe-----eCCHHHHHHhcChhHHHHHHHHHHhhCCCCCCcceecCCCCcccccccccCCCCCCcCC
Confidence 11000 00001111 12578888999999999999 44332 22222 1445678888653 3
Q ss_pred CCcccCCC--------------------CC-ccCC----------------------CceeEEeEeeeeccCCCceEEEE
Q 024285 150 VVPHQDNS--------------------FL-ITEP----------------------STCTGLWLALEDATIINGCLWAI 186 (269)
Q Consensus 150 ~~wH~D~~--------------------~~-~~~~----------------------~~~v~~~i~L~d~~~~~G~l~vi 186 (269)
.+.|.|.. .| ..|| .++++.|++|+++.++.|+|.|+
T Consensus 240 l~pHvD~GSlERWe~~~y~~vY~~If~G~WedyDPwda~~R~~a~~y~~~~~~~Cs~FR~fQGwlaLS~~gP~eGtL~v~ 319 (461)
T 2dbn_A 240 LGAHTDSGALERWLLPAYQRVFANVFNGNLAQYDPWHAAHRTEVEEYTVDNTTKCSVFRTFQGWTALSDMLPGQGLLHVV 319 (461)
T ss_dssp EEEEECSCSTHHHHCHHHHHHTHHHHTSCGGGCCTTBCTTGGGCCCCCCC---CCCSCCSEEEEEESSCBCTTSSCEEEC
T ss_pred CCcccCCCchhhcccchhhHHHHHhhcCCccccCcccccccccceecccCCCCcccccceeeeehhccCCCCCCCcEEEe
Confidence 56799982 12 1122 15699999999999999999999
Q ss_pred cCCCCCCC---ccceeeCC------C---Ccccc-CCC--CCCCCCCeeeeeecCccEEEEeCccccCCCCCCC-CCCce
Q 024285 187 PGSHKNGL---VRRFIRGE------E---GVYFD-RPP--PSYDQNDFVPIEVKAGSLVLIHGDLIHQSFENQS-SKSRH 250 (269)
Q Consensus 187 pGSH~~~~---~~~~~~~~------~---~~~~~-~~~--~~~~~~~~v~~~~~~Gdvvl~~~~~~H~~~~n~s-~~~R~ 250 (269)
| +++... ++.|+... | +.... .+. +.........+.++|||+|+||+.++|+..++.+ +..|.
T Consensus 320 P-~~~atAY~LLRpFf~~~~d~~~~Ga~pg~~q~~~~~~HP~L~~~mv~iP~vePGD~V~WH~D~iH~V~~~h~g~~~s~ 398 (461)
T 2dbn_A 320 P-IPEAMAYVLLRPLLDDVPEDELCGVAPGRVLPVSEQWHPLLIEALTSIPKLEAGDSVWWHCDVIHSVAPVENQQGWGN 398 (461)
T ss_dssp S-CTTHHHHHHHGGGSTTSCTTCCTTCCTTSCEECCTTTCHHHHTTCEECCCBCTTCEEEEETTCCEEECCBSSCCSCCC
T ss_pred e-chhhHHHHhhhhhhccCCcccccCCCCCcccCCCcccCCcccCceeeCCCCCCCCEEEEcCCCccccccCCCCCccee
Confidence 9 865211 12222210 0 01000 000 0011234566679999999999999999987765 45899
Q ss_pred EEEEEEEeCC
Q 024285 251 AYSLHVVETD 260 (269)
Q Consensus 251 ~~~~~~~~~~ 260 (269)
++++.+.|..
T Consensus 399 V~YIpa~P~~ 408 (461)
T 2dbn_A 399 VMYIPAAPMC 408 (461)
T ss_dssp EEECCBCEES
T ss_pred EEEecCCCCc
Confidence 9998888763
No 9
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=98.61 E-value=1.5e-06 Score=72.44 Aligned_cols=82 Identities=23% Similarity=0.317 Sum_probs=61.1
Q ss_pred CCCCCcccCCCCCccCCCceeEEeEeeeec---cCCCceEEEEcCCCCCCCccceeeCCCCccccCCCCCCCCCCeeeee
Q 024285 147 GGEVVPHQDNSFLITEPSTCTGLWLALEDA---TIINGCLWAIPGSHKNGLVRRFIRGEEGVYFDRPPPSYDQNDFVPIE 223 (269)
Q Consensus 147 ~~~~~wH~D~~~~~~~~~~~v~~~i~L~d~---~~~~G~l~vipGSH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 223 (269)
|....||.|... ...+.+++.+||.|- ..++|.|++.|.. ......+.
T Consensus 128 G~~y~~H~D~~~---~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~--------------------------~~~~~~v~ 178 (247)
T 2hbt_A 128 GTGYVRHVDNPN---GDGRCVTCIYYLNKDWDAKVSGGILRIFPEG--------------------------KAQFADIE 178 (247)
T ss_dssp SCCEEEECSSCS---CCSEEEEEEEECBTTCCHHHHBCCEEECCTT--------------------------CSSCEEEC
T ss_pred CCcccccccCCC---CCCceEEEEEEeCCCCCCCCCceeEEEecCC--------------------------CCceEEEE
Confidence 344799999832 345789999999985 3467888777542 01234677
Q ss_pred ecCccEEEEeCc--cccCCCCCCCCCCceEEEEEEEeC
Q 024285 224 VKAGSLVLIHGD--LIHQSFENQSSKSRHAYSLHVVET 259 (269)
Q Consensus 224 ~~~Gdvvl~~~~--~~H~~~~n~s~~~R~~~~~~~~~~ 259 (269)
-+.|.+|+|.+. ++|++.| +...|++++..|...
T Consensus 179 P~~grlv~F~s~~~~~H~V~p--~~~~R~sit~W~~~~ 214 (247)
T 2hbt_A 179 PKFDRLLFFWSDRRNPHEVQP--AYATRYAITVWYFDA 214 (247)
T ss_dssp CBTTEEEEEECSTTCCEEECC--BSSCEEEEEEEEEEH
T ss_pred cCCCEEEEEecCCCceeeecc--CCCEEEEEEEEEcCC
Confidence 789999999986 8999998 457999999988764
No 10
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=98.26 E-value=2.3e-05 Score=64.37 Aligned_cols=96 Identities=11% Similarity=0.106 Sum_probs=62.6
Q ss_pred CCCCCcccCCCCCcc------CCCceeEEeEeeeeccCCCceEEEEcCCCCCCCccceeeCCCCccccCCCCCCCCCCee
Q 024285 147 GGEVVPHQDNSFLIT------EPSTCTGLWLALEDATIINGCLWAIPGSHKNGLVRRFIRGEEGVYFDRPPPSYDQNDFV 220 (269)
Q Consensus 147 ~~~~~wH~D~~~~~~------~~~~~v~~~i~L~d~~~~~G~l~vipGSH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 220 (269)
|....+|.|...... ...+.+++.+||+|+. ++|.+.| |..... .. ...+. . .....+
T Consensus 108 G~~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~-~GGeT~F-p~~~~~---~~------~~~~~----~-c~~~~~ 171 (224)
T 2jig_A 108 GQKYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVE-EGGETVL-PNAEQK---VT------GDGWS----E-CAKRGL 171 (224)
T ss_dssp TCCEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCS-EECCEEE-TTSSSC---CC------STTSC----T-TGGGSE
T ss_pred CccccCcccCCCCccccccccCCCeEEEEEEEecCCC-CCCceeC-CCcccc---cc------ccccc----c-cccCce
Confidence 345789999854221 1247899999999985 6677777 543211 00 00010 0 012357
Q ss_pred eeeecCccEEEEeC---------ccccCCCCCCCCCCceEEEEEEEeC
Q 024285 221 PIEVKAGSLVLIHG---------DLIHQSFENQSSKSRHAYSLHVVET 259 (269)
Q Consensus 221 ~~~~~~Gdvvl~~~---------~~~H~~~~n~s~~~R~~~~~~~~~~ 259 (269)
.+..++|++|||.. .++|++.|-.. ..|+++..-+...
T Consensus 172 ~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~-G~K~~~~~Wi~~~ 218 (224)
T 2jig_A 172 AVKPIKGDALMFYSLKPDGSNDPASLHGSCPTLK-GDKWSATKWIHVA 218 (224)
T ss_dssp EECCCTTCEEEEESBCTTSCBCGGGCEEECCEEE-SEEEEEEEEEESS
T ss_pred EEecccCcEEEEEeeCCCCCCCCCCcccCCcccc-ceEEEEEEeEEcC
Confidence 88999999999954 99999999764 4688888777654
No 11
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=97.98 E-value=2.1e-05 Score=65.23 Aligned_cols=83 Identities=25% Similarity=0.140 Sum_probs=57.7
Q ss_pred CCCCcccCCCCCccC--C-CceeEEeEeeeecc-CCCceEEEEcCCCCCCCccceeeCCCCccccCCCCCCCCCCeeeee
Q 024285 148 GEVVPHQDNSFLITE--P-STCTGLWLALEDAT-IINGCLWAIPGSHKNGLVRRFIRGEEGVYFDRPPPSYDQNDFVPIE 223 (269)
Q Consensus 148 ~~~~wH~D~~~~~~~--~-~~~v~~~i~L~d~~-~~~G~l~vipGSH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 223 (269)
....||.|....... . .+.+++.+||+|.. .++|.+.|... ...+.+.
T Consensus 110 ~~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~----------------------------~~~~~V~ 161 (243)
T 3dkq_A 110 ETFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDT----------------------------YGQQSIK 161 (243)
T ss_dssp CEEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEET----------------------------TEEEEEC
T ss_pred CeeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeC----------------------------CCcEEEe
Confidence 447999998653211 1 25788999999853 34555555432 0124567
Q ss_pred ecCccEEEEeCccccCCCCCCCCCCceEEEEEEEeC
Q 024285 224 VKAGSLVLIHGDLIHQSFENQSSKSRHAYSLHVVET 259 (269)
Q Consensus 224 ~~~Gdvvl~~~~~~H~~~~n~s~~~R~~~~~~~~~~ 259 (269)
.++|++|+|.+.++|++.|-. ...|+++...+...
T Consensus 162 P~~G~~v~F~s~~lH~v~pV~-~G~R~~~~~Wi~s~ 196 (243)
T 3dkq_A 162 LSAGSLVLYPSSSLHQVTPVL-SGERTAAFMWLQSM 196 (243)
T ss_dssp CCTTCEEEEETTSEEEECCEE-EECEEEEEEEEEES
T ss_pred cCCCEEEEECCCCeEcCcccc-ccCEEEEEEehhhc
Confidence 789999999999999999865 35789888877643
No 12
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=97.92 E-value=0.00024 Score=57.81 Aligned_cols=163 Identities=16% Similarity=0.086 Sum_probs=93.6
Q ss_pred hhccEEEecCCCCHHHHHHHHHHHHHHHccCCCCCcee-eecCcccccccchhcccccccceeeeccccCCCCCcccccc
Q 024285 16 NSQGYVVLESFASDEEIEAMRKQMDHLLDGFDCSTSSV-FSTTNQQKVTDDYFYESAEKISFFFEEKAFGDDGNLKQPKE 94 (269)
Q Consensus 16 ~~~Gyvvl~~~l~~~~v~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~G~~~~~~~ 94 (269)
.+-..+++++||++++|+.|++.....++... + ... . ...+| .++
T Consensus 37 ~~P~i~~~~~fLs~~Ec~~Li~~a~~~l~~s~-----v~~~~-----~--------~~~~R---------------tS~- 82 (216)
T 3itq_A 37 EEPLIVVLGNVLSDEECDELIELSKSKLARSK-----VGSSR-----D--------VNDIR---------------TSS- 82 (216)
T ss_dssp TTTTEEEEESCSCHHHHHHHHHHHHHHHC------------------C--------CCCGG---------------GTT-
T ss_pred CCCCEEEECCcCCHHHHHHHHHHhhcccccce-----eccCC-----c--------cCCcE---------------eee-
Confidence 45678999999999999999999987654421 1 000 0 00000 000
Q ss_pred cccccccccccccChHHHhhhcChhHHHHHHHhCCCCceeeccceeee-cCCCCCCCCcccCCCCCcc---CCCceeEEe
Q 024285 95 LSINKVGHALHELDPVFKKFSRSEKTSNLLHSLGYKRPVDIQSMYIFK-QPGIGGEVVPHQDNSFLIT---EPSTCTGLW 170 (269)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~l~~~p~l~~~~~~l~g~~~~~~~~~~~~~-~p~~~~~~~wH~D~~~~~~---~~~~~v~~~ 170 (269)
.. .+ ..++... +|.+-++++.|-+.......-+.+ .+ |....+|.|...... ...+.+++.
T Consensus 83 ~~------wl-~~~~~v~------~i~~Ri~~~~gl~~~~~E~lqv~~Y~~--G~~y~~H~D~~~~~~~~~~~~R~~T~l 147 (216)
T 3itq_A 83 GA------FL-DDNELTA------KIEKRISSIMNVPASHGEGLHILNYEV--DQQYKAHYDYFAEHSRSAANNRISTLV 147 (216)
T ss_dssp CE------EC-CCCHHHH------HHHHHHHHHHTSCGGGBCCCEEEEECB--TCCEEEECSSCCTTSGGGGGCEEEEEE
T ss_pred eE------Ee-CCcHHHH------HHHHHHHHhcCceeccccceeEEEeCC--CCccccccCCCcCCCcccCCceEEEEE
Confidence 00 01 1133332 344445555442221111112222 23 345789999854211 124789999
Q ss_pred EeeeeccCCCceEEEEcCCCCCCCccceeeCCCCccccCCCCCCCCCCeeeeeecCccEEEEeC---------ccccCCC
Q 024285 171 LALEDATIINGCLWAIPGSHKNGLVRRFIRGEEGVYFDRPPPSYDQNDFVPIEVKAGSLVLIHG---------DLIHQSF 241 (269)
Q Consensus 171 i~L~d~~~~~G~l~vipGSH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~Gdvvl~~~---------~~~H~~~ 241 (269)
+||.|+ .++|.+.| |. ..+.+..++|++|+|.. .++|++.
T Consensus 148 ~YLnd~-~~GGeT~F-p~-----------------------------~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~ 196 (216)
T 3itq_A 148 MYLNDV-EEGGETFF-PK-----------------------------LNLSVHPRKGMAVYFEYFYQDQSLNELTLHGGA 196 (216)
T ss_dssp EECSCC-SEECCEEE-TT-----------------------------TTEEECCCTTCEEEEECCCSSHHHHHTTCEEEC
T ss_pred EecccC-CcCceeEe-cC-----------------------------CCCEEecCCCeEEEEeccCCCCCCCCccccccc
Confidence 999997 35555544 21 12456778999999998 7999999
Q ss_pred CCCCCCCceEEEEEEEeC
Q 024285 242 ENQSSKSRHAYSLHVVET 259 (269)
Q Consensus 242 ~n~s~~~R~~~~~~~~~~ 259 (269)
|-.. ..|+++...+...
T Consensus 197 PV~~-G~K~v~~~W~~~~ 213 (216)
T 3itq_A 197 PVTK-GEKWIATQWVRRG 213 (216)
T ss_dssp CEEE-SCEEEEEEEEESS
T ss_pred eecc-ccEEEEEeeEecC
Confidence 9764 4688887776654
No 13
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=97.72 E-value=0.00057 Score=55.62 Aligned_cols=134 Identities=13% Similarity=0.078 Sum_probs=78.9
Q ss_pred ChHHHhhh--cChhHHHHHHHhC-CC--Cceeecccee-eecCCCCCCCCcccCCCCCccCCCceeEEeEeeeeccCCCc
Q 024285 108 DPVFKKFS--RSEKTSNLLHSLG-YK--RPVDIQSMYI-FKQPGIGGEVVPHQDNSFLITEPSTCTGLWLALEDATIING 181 (269)
Q Consensus 108 ~~~~~~l~--~~p~l~~~~~~l~-g~--~~~~~~~~~~-~~~p~~~~~~~wH~D~~~~~~~~~~~v~~~i~L~d~~~~~G 181 (269)
+|.|..|. -.+.+.+.++++. +. .-..+....+ +-.+|. . ...|.|. ...++.-+||+ ++.++|
T Consensus 70 ~p~~~~L~~~i~~~~~~~~~~l~~~~~~~~~~i~~~W~~~~~~G~-~-~~~H~H~-------~~~lSgV~Yl~-~p~~~G 139 (216)
T 2rg4_A 70 FPIFADLVKSLDAHVAAFAEDLEFELDGKALRLEDIWINILPEGG-V-HGSHIHP-------HSVISGTTYVA-MPEGTS 139 (216)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCTTCCCEEEEEEEEEECTTC-C-EEEECCT-------TCSEEEEEEEE-CCSCSC
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCCCCCceEEeeEEEEEcCCCC-c-ccCccCC-------CCeEEEEEEEE-CCCCCc
Confidence 56665544 2455666666663 22 1112223333 334432 3 4778773 34677778887 667788
Q ss_pred eEEEEcCCCCCCCccceeeCCCCccccCCCCCCCCCCeeeeeecCccEEEEeCccccCCCCCCCCCCceEEEEEEEeCC
Q 024285 182 CLWAIPGSHKNGLVRRFIRGEEGVYFDRPPPSYDQNDFVPIEVKAGSLVLIHGDLIHQSFENQSSKSRHAYSLHVVETD 260 (269)
Q Consensus 182 ~l~vipGSH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~Gdvvl~~~~~~H~~~~n~s~~~R~~~~~~~~~~~ 260 (269)
.|.+.......... .. ....+..+.....+.+..++|++|||-+.++|++.+|.++..|.++.+.+....
T Consensus 140 ~L~f~~p~~~~~~~----~~-----~~~~~~~~~~~~~~~i~P~~G~lvlFpS~l~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 140 ALKLEDPRLPFMMA----AP-----TRRKGAREELRTFRSVAPKVGDVLLWESWLRHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp CEEEECTTGGGCSS----SC-----CCCCCSCGGGCSEEEECCCTTEEEEEETTSCEEECCCCSSSCEEEEEEEEEC--
T ss_pred cEEEeCCccccccc----cC-----cccccCcccCCCeeEecCCCCeEEEECCCCEEeccCCCCCCCEEEEEEEeecCC
Confidence 99887421111000 00 000000111123457889999999999999999999999899999999998763
No 14
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=97.00 E-value=0.018 Score=53.28 Aligned_cols=124 Identities=15% Similarity=0.116 Sum_probs=80.9
Q ss_pred HHHhhhcChhHHHHHHHhCCC-Cce-eeccc-eeeecCCCCCCCCcccCCCCCccCCCceeEEeEeeeec-----cCCCc
Q 024285 110 VFKKFSRSEKTSNLLHSLGYK-RPV-DIQSM-YIFKQPGIGGEVVPHQDNSFLITEPSTCTGLWLALEDA-----TIING 181 (269)
Q Consensus 110 ~~~~l~~~p~l~~~~~~l~g~-~~~-~~~~~-~~~~~p~~~~~~~wH~D~~~~~~~~~~~v~~~i~L~d~-----~~~~G 181 (269)
.|.+.+.++.++++++.+.|. +.. ....+ +..-.+| .-...|.|.. ..+.+++.+||.+- ...+|
T Consensus 96 ~Lr~~L~S~~Fr~~Ls~iTGi~~Lsg~~~D~~~a~Y~~G--~fL~~H~D~~-----~~RrvS~VLYLN~pd~~W~~e~GG 168 (633)
T 3kt7_A 96 KLRQILYSKQYRDFFGYVTKAGKLSGSKTDMSINTYTKG--CHLLTHDDVI-----GSRRISFILYLPDPDRKWKSHYGG 168 (633)
T ss_dssp HHHHHHTSHHHHHHHHHHHTCCCCCSSCCCEEEEEECTT--CEEEEECCCC-----TTEEEEEEEECSCTTSCCCGGGBC
T ss_pred HHHHHHhcHHHHHHHHHHhCCcccCCCceeEEEEEeCCC--CeeeecCCCC-----CCeEEEEEEEcCCCCCCCCccCCc
Confidence 345677889999999999764 221 11122 2222333 3358899953 13789999999973 23567
Q ss_pred eEEEEcCCCCCCCccceeeCCCCccccCCCCCCCCCCeeeeeecCccEEEEeCc---cccCCCCCCCCCCceEEEEEEEe
Q 024285 182 CLWAIPGSHKNGLVRRFIRGEEGVYFDRPPPSYDQNDFVPIEVKAGSLVLIHGD---LIHQSFENQSSKSRHAYSLHVVE 258 (269)
Q Consensus 182 ~l~vipGSH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~Gdvvl~~~~---~~H~~~~n~s~~~R~~~~~~~~~ 258 (269)
.|++.+..... . |. ......+.-..|.++||... .+|+..+-.....|+++...|..
T Consensus 169 eL~Lyd~d~~~-----~-----------P~----~d~~~~I~P~fNrLV~F~vsp~~S~H~V~eV~~~~~RlSItGWF~~ 228 (633)
T 3kt7_A 169 GLRLFPSILPN-----V-----------PH----SDPSAKLVPQFNQIAFFKVLPGFSFHDXEEVKVDKHRLSIQGWYHI 228 (633)
T ss_dssp CEEECCEEETT-----E-----------EC----SSCSEEECCCTTEEEEEECCTTTCCEEECCBCSSCCEEEEEEEEEC
T ss_pred eEEEecCCCcC-----C-----------CC----CCceEEEecCCCeEEEEEcCCCCCcCCCCccCCCCCEEEEEEEecc
Confidence 78877642110 0 00 12244567788999999964 99998776667899999999986
Q ss_pred CC
Q 024285 259 TD 260 (269)
Q Consensus 259 ~~ 260 (269)
..
T Consensus 229 p~ 230 (633)
T 3kt7_A 229 PQ 230 (633)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 15
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=88.37 E-value=0.88 Score=38.27 Aligned_cols=103 Identities=17% Similarity=0.198 Sum_probs=63.8
Q ss_pred cChhHHHHHHHhCCCCceeeccceeeecCCCCCCCCcccCCCCCccCCCceeEEeEeeeeccCCCceEEEEcCCCCCCCc
Q 024285 116 RSEKTSNLLHSLGYKRPVDIQSMYIFKQPGIGGEVVPHQDNSFLITEPSTCTGLWLALEDATIINGCLWAIPGSHKNGLV 195 (269)
Q Consensus 116 ~~p~l~~~~~~l~g~~~~~~~~~~~~~~p~~~~~~~wH~D~~~~~~~~~~~v~~~i~L~d~~~~~G~l~vipGSH~~~~~ 195 (269)
.-|.+.++++..++.+... ...+ ..+|| +.+.+|+|...........+.+-|+|.. ..|+..+
T Consensus 74 ~~P~i~~il~~~f~~~~l~-~vRl-rL~PG--~~I~~HrD~~~l~~~~~~~~RlHIPL~T---np~~~f~---------- 136 (290)
T 1e5r_A 74 HVPYLKEIVTTVFDGTHLQ-MARS-RNLKN--AIVIPHRDFVELDREVDRYFRTFMVLED---SPLAFHS---------- 136 (290)
T ss_dssp SSCHHHHHHHHHBCSSSEE-EEEE-EEEES--EEEEEECCC--------CBCCEEEECSC---CTTEEEE----------
T ss_pred cChHHHHHHHHhcccchhh-eEEE-EeCCC--CEeeCccCccccccccCCceEEEeeEec---CCCcEEE----------
Confidence 3588899997776554311 1123 44554 4589999983211011234556677642 1121111
Q ss_pred cceeeCCCCccccCCCCCCCCCCeeeeeecCccEEEEeCccccCCCCCCCCCCceEEEEEEE
Q 024285 196 RRFIRGEEGVYFDRPPPSYDQNDFVPIEVKAGSLVLIHGDLIHQSFENQSSKSRHAYSLHVV 257 (269)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~Gdvvl~~~~~~H~~~~n~s~~~R~~~~~~~~ 257 (269)
.+.....|++|.+.++|....|.+. |.++..|..+.+-+.
T Consensus 137 ---------------------vdg~~~~m~~GE~w~~d~~~~H~v~-N~g~~~RIhLv~D~~ 176 (290)
T 1e5r_A 137 ---------------------NEDTVIHMRPGEIWFLDAATVHSAV-NFSEISRQSLCVDFA 176 (290)
T ss_dssp ---------------------ETTEEECCCTTEEEECCTTSCEEEE-ESSSSCCCEEEEEEB
T ss_pred ---------------------ECCEEEecCCCCEEEEcCCCeeEEE-cCCCCCeEEEEEEec
Confidence 1124679999999999999999988 777889999998883
No 16
>3qh6_A CT296; iron, modeling; HET: PG4; 1.80A {Chlamydia trachomatis} PDB: 3qh7_A
Probab=76.21 E-value=4.7 Score=29.35 Aligned_cols=41 Identities=15% Similarity=0.404 Sum_probs=35.5
Q ss_pred CCCHHHHHhhhhccEEEecCCCCHHHHHHHHHHHHHHHccC
Q 024285 6 NLNSDNLNFFNSQGYVVLESFASDEEIEAMRKQMDHLLDGF 46 (269)
Q Consensus 6 ~lt~~~~~~f~~~Gyvvl~~~l~~~~v~~l~~~~~~~~~~~ 46 (269)
.|--|.+..|+..|-+.++++++.++|..|...+...+++.
T Consensus 6 vLHLeHlR~FqNhGsILFE~l~~~~DC~~Le~~l~~Fv~~v 46 (157)
T 3qh6_A 6 VLHLEHKRYFQNHGHILFEGLAPVSDCKQLEAELKLFLKEV 46 (157)
T ss_dssp CCCHHHHHHHHHHSEEEETTCSCHHHHHHHHHHHHHHC---
T ss_pred HhhHHHHHHHhccCceeecccCCHHHHHHHHHHHHHHHHHH
Confidence 46678999999999999999999999999999999988764
No 17
>3pl0_A Uncharacterized protein; quorum sensing, biofilm formation, double-stranded beta-HELI structural genomics; HET: MSE; 1.91A {Methylibium petroleiphilum}
Probab=75.61 E-value=19 Score=29.42 Aligned_cols=37 Identities=16% Similarity=0.168 Sum_probs=29.2
Q ss_pred eecCccEEEEe-CccccCCCCCCC----C----CCceEEEEEEEeC
Q 024285 223 EVKAGSLVLIH-GDLIHQSFENQS----S----KSRHAYSLHVVET 259 (269)
Q Consensus 223 ~~~~Gdvvl~~-~~~~H~~~~n~s----~----~~R~~~~~~~~~~ 259 (269)
..++||+++.+ .+++|.++|-.. . ..|=++.+.|.+.
T Consensus 203 l~~p~d~llv~D~~~~H~vTpI~~~~~~~~~~~g~RDvlVvtf~~~ 248 (254)
T 3pl0_A 203 LEQPWTVLLLDDQQVIHESTPLLPLDPADPAVPAHRDTLVLTYRSG 248 (254)
T ss_dssp CCSTTCEEEEETTTEEEEECCEEESCTTCTTSCCEEEEEEEEEESS
T ss_pred ecCCCcEEEEeCCcccCCCCccccCCCCCCCCceEEEEEEEEecCC
Confidence 45899999888 668999998542 1 4599999999875
No 18
>3eat_X Pyoverdine biosynthesis protein PVCB; paerucumarin, Fe/alpha-ketoglutarate dependent hydroxylase, 2-isocyano-6,7-dihydroxycoumarin; 2.50A {Pseudomonas aeruginosa}
Probab=75.61 E-value=3.7 Score=34.38 Aligned_cols=43 Identities=16% Similarity=0.203 Sum_probs=33.6
Q ss_pred CCeeeeeecCccEEEEeCc-cccCCCCCCCCCCceEEEEEEEeC
Q 024285 217 NDFVPIEVKAGSLVLIHGD-LIHQSFENQSSKSRHAYSLHVVET 259 (269)
Q Consensus 217 ~~~v~~~~~~Gdvvl~~~~-~~H~~~~n~s~~~R~~~~~~~~~~ 259 (269)
...+....++||++|||-+ ++|++..-..+..|.+.-+.....
T Consensus 239 ~~~~~~~w~~GDlviwDNr~vlH~r~~~~~~~~R~l~R~~i~gd 282 (293)
T 3eat_X 239 QAHYAHRWRSDDLVIADNLTLLHGREAFAHRAPRHLRRVHIHAE 282 (293)
T ss_dssp TTEEEECCCTTCEEEEETTTEEEEECCBSSCCCEEEEEEEEEEE
T ss_pred ccEEEEEcCCCCEEEEeCCceEEcccCCCCCCceEEEEEEEcCC
Confidence 4567889999999999987 599988765556788777766543
No 19
>1jr7_A GABT protein, hypothetical 37.4 kDa protein in ILEY-GABD interg region; gamma amino-butyric acid metabolism, GABA; 2.00A {Escherichia coli} SCOP: b.82.2.3 PDB: 2r6s_A*
Probab=73.16 E-value=5.3 Score=33.84 Aligned_cols=49 Identities=12% Similarity=0.165 Sum_probs=36.5
Q ss_pred CCeeeeeecCccEEEEeC-ccccCCCCCCCC-C-CceEE--EEEEEeCCCcccCC
Q 024285 217 NDFVPIEVKAGSLVLIHG-DLIHQSFENQSS-K-SRHAY--SLHVVETDGCRWSQ 266 (269)
Q Consensus 217 ~~~v~~~~~~Gdvvl~~~-~~~H~~~~n~s~-~-~R~~~--~~~~~~~~~~~~~~ 266 (269)
...+...+++||+|+||- +++||...-... . .|+.+ ...|...+ ..|..
T Consensus 256 ~~~~~~kL~pGd~vifDN~RvLHGR~aF~~~~g~~R~L~R~~G~Y~~~~-~~~~~ 309 (311)
T 1jr7_A 256 KGILSVPVPVGKFLLINNLFWLHGRDRFTPHPDLRRELMRQRGYFAYAS-NHYQT 309 (311)
T ss_dssp TTCEEECCCTTCEEEEETTTEEEEECCBCCCTTCEEEEEEEEEEECCCC-SCCCC
T ss_pred ccEEEEEcCCCcEEEEeCCccccCcCCcCCCCCCceEEecccEEEecCc-ccccc
Confidence 467889999999999987 589998876533 3 46654 88888874 55653
No 20
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=72.41 E-value=4.5 Score=33.49 Aligned_cols=42 Identities=7% Similarity=0.007 Sum_probs=32.1
Q ss_pred CCeeeeeecCccEEEEeCc-cccCCCCCCCCCCceEEEEEEEe
Q 024285 217 NDFVPIEVKAGSLVLIHGD-LIHQSFENQSSKSRHAYSLHVVE 258 (269)
Q Consensus 217 ~~~v~~~~~~Gdvvl~~~~-~~H~~~~n~s~~~R~~~~~~~~~ 258 (269)
...+....++||++|||-+ ++|+..+-..+..|++.-+....
T Consensus 233 ~~~~~~~w~~GDv~i~DN~~~lH~r~~f~~~~~R~l~R~~i~~ 275 (283)
T 1otj_A 233 EFQVRWRWQPNDIAIWDNRVTQHYANADYLPQRRIMHRATILG 275 (283)
T ss_dssp GGEEEECCCTTCEEEEETTSEEEEECCCCTTSCEEEEEEEEEC
T ss_pred CcEEEeeEcCCCEEEEECcceeecccCCCCCCceEEEEEEEec
Confidence 3578899999999999876 69999886555567766665544
No 21
>1nx8_A CARC, carbapenem synthase; jelly roll, unknown function; HET: AKG N7P; 2.30A {Pectobacterium carotovorum} SCOP: b.82.2.8 PDB: 1nx4_A*
Probab=71.61 E-value=5.1 Score=32.92 Aligned_cols=40 Identities=18% Similarity=0.242 Sum_probs=31.0
Q ss_pred CCeeeeeecCccEEEEeCc-cccCCCCCCC-CCCceEEEEEE
Q 024285 217 NDFVPIEVKAGSLVLIHGD-LIHQSFENQS-SKSRHAYSLHV 256 (269)
Q Consensus 217 ~~~v~~~~~~Gdvvl~~~~-~~H~~~~n~s-~~~R~~~~~~~ 256 (269)
...+....++||++|||-+ ++|+..+-.. +..|++.-+..
T Consensus 229 ~~~~~~~w~~GD~~i~DN~~vlH~R~~f~~~~~~R~l~R~~i 270 (273)
T 1nx8_A 229 RYYYKHFWEDGDLLIMDNRRVIHEREEFNDDDIVRRLYRGQT 270 (273)
T ss_dssp TTEEEECCCTTCEEEEETTTEEEEECCCCCTTCEEEEEEEEE
T ss_pred ceEEEeEecCCCEEEEECCeeeeccccCCCCCCCeEEEEeec
Confidence 4578899999999999876 6999987654 45677665554
No 22
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=70.30 E-value=4.7 Score=33.44 Aligned_cols=42 Identities=5% Similarity=0.037 Sum_probs=32.6
Q ss_pred CCeeeeeecCccEEEEeCc-cccCCCCCCCCCCceEEEEEEEe
Q 024285 217 NDFVPIEVKAGSLVLIHGD-LIHQSFENQSSKSRHAYSLHVVE 258 (269)
Q Consensus 217 ~~~v~~~~~~Gdvvl~~~~-~~H~~~~n~s~~~R~~~~~~~~~ 258 (269)
.-.+....++||++|||-+ ++|++.....+..|.+.-+....
T Consensus 231 e~~~r~~W~~GDlviwDNr~~lH~a~~d~~~~~R~~~R~ti~g 273 (277)
T 3pvj_A 231 EFSIRWRWQENDVAFWDNRVTQHFAVDDYRPNRRVMHRATILG 273 (277)
T ss_dssp GGEEEECCCTTCEEEEETTSEEEEECCCCTTSCCEEEEEEECC
T ss_pred CcEEEEeeCCCCEEEEeCCceeeeccCCCCCCccEEEEEEecC
Confidence 3567788999999999988 59999876655678877666544
No 23
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=69.62 E-value=4.9 Score=33.62 Aligned_cols=42 Identities=12% Similarity=0.208 Sum_probs=32.8
Q ss_pred CCeeeeeecCccEEEEeCc-cccCCCCCCCCCCceEEEEEEEe
Q 024285 217 NDFVPIEVKAGSLVLIHGD-LIHQSFENQSSKSRHAYSLHVVE 258 (269)
Q Consensus 217 ~~~v~~~~~~Gdvvl~~~~-~~H~~~~n~s~~~R~~~~~~~~~ 258 (269)
...+....++||++|||-+ ++|+..+-..+..|.+.-+.+..
T Consensus 242 ~~~~~~~w~~GDvvi~DNr~~lH~r~~f~~~~~R~l~R~~i~g 284 (301)
T 1oih_A 242 ENTVRWRWEAGDVAIWDNRATQHYAVDDYGTQPRIVRRVTLAG 284 (301)
T ss_dssp GGEEEECCCTTCEEEEETTSEEEEECCCCTTSCCEEEEEEECC
T ss_pred cceEEEEEcCCCEEEEEccceeecccCCCCCCceEEEEEEEeC
Confidence 4578899999999999976 79999876655577776666654
No 24
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=66.04 E-value=6.5 Score=33.10 Aligned_cols=43 Identities=9% Similarity=0.210 Sum_probs=33.1
Q ss_pred CCeeeeeecCccEEEEeCc-cccCCCCCCCCCCceEEEEEEEeC
Q 024285 217 NDFVPIEVKAGSLVLIHGD-LIHQSFENQSSKSRHAYSLHVVET 259 (269)
Q Consensus 217 ~~~v~~~~~~Gdvvl~~~~-~~H~~~~n~s~~~R~~~~~~~~~~ 259 (269)
...+....++||++|||-+ ++|++.....+..|.+.-+.....
T Consensus 235 e~~~r~~W~~GDlviwDNr~~lH~a~~d~~~~~R~~~R~ti~g~ 278 (301)
T 3r1j_A 235 ENTVRWSWAPGDVAMWDNRATQHRAIDDYDDQPRLMHRITLMGD 278 (301)
T ss_dssp GGEEEECCCTTCEEEEETTSEEEEECCCSTTCCCEEEEEEECCC
T ss_pred CeEEEeeeCCCCEEEEEcCceeecccCCCCCCCeEEEEEEEcCC
Confidence 4567788899999999987 699998655556788777776553
No 25
>1ds1_A Clavaminate synthase 1; oxygenase, trifunctional enzyme, oxidoreductase,lyase; HET: AKG; 1.08A {Streptomyces clavuligerus} SCOP: b.82.2.2 PDB: 1drt_A* 1ds0_A 1dry_A* 1gvg_A*
Probab=64.67 E-value=8.7 Score=32.46 Aligned_cols=40 Identities=13% Similarity=0.133 Sum_probs=28.6
Q ss_pred CeeeeeecCccEEEEeCc-cccCCCCCCC---CCCceEEEEEEE
Q 024285 218 DFVPIEVKAGSLVLIHGD-LIHQSFENQS---SKSRHAYSLHVV 257 (269)
Q Consensus 218 ~~v~~~~~~Gdvvl~~~~-~~H~~~~n~s---~~~R~~~~~~~~ 257 (269)
..+...+++||++|||-+ ++|+..+-.. +..|++.-+...
T Consensus 258 ~~~~~~w~~GDv~i~DN~~~lH~R~~f~~~~~~~~R~L~R~~v~ 301 (324)
T 1ds1_A 258 VTEAVYLEPGDLLIVDNFRTTHARTPFSPRWDGKDRWLHRVYIR 301 (324)
T ss_dssp TCEEECCCTTCEEEEETTTEEEEECCCCCCCSSCCCEEEEEEEE
T ss_pred ccEEEeeCCCCEEEEeCCceeecCCccCCCCCCCCcEEEEEEEe
Confidence 467889999999999875 6999776543 235665554443
No 26
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=63.43 E-value=4.2 Score=28.54 Aligned_cols=34 Identities=9% Similarity=0.095 Sum_probs=24.1
Q ss_pred eeecCccEEEEeCccccCCCCCCCCC-CceEEEEEE
Q 024285 222 IEVKAGSLVLIHGDLIHQSFENQSSK-SRHAYSLHV 256 (269)
Q Consensus 222 ~~~~~Gdvvl~~~~~~H~~~~n~s~~-~R~~~~~~~ 256 (269)
..+++||.+++.+.+.|+.. |.++. ....+.+.|
T Consensus 75 ~~l~~Gd~i~ipa~~~H~~~-n~~~~~~~~~l~v~~ 109 (112)
T 2opk_A 75 RVMRPGDWLHVPAHCRHRVA-WTDGGEPTVWLAVHC 109 (112)
T ss_dssp EEECTTEEEEECTTCCEEEE-EECSSSCEEEEEEEE
T ss_pred EEECCCCEEEECCCCcEEEE-eCCCCCCEEEEEEEE
Confidence 68999999999999999965 44433 343344444
No 27
>2wbq_A L-arginine beta-hydroxylase; oxidoreductase, non-heme Fe(II) hydroxylase, cbeta- hydroxylation, L-arginine oxygenase, NRPS, viomycin; HET: ZZU; 1.10A {Streptomyces vinaceus} PDB: 2wbp_A* 2wbo_A*
Probab=62.54 E-value=8.7 Score=32.97 Aligned_cols=39 Identities=13% Similarity=0.288 Sum_probs=28.2
Q ss_pred eeeeeecCccEEEEeCc-cccCCCCCCC---CCCceEEEEEEE
Q 024285 219 FVPIEVKAGSLVLIHGD-LIHQSFENQS---SKSRHAYSLHVV 257 (269)
Q Consensus 219 ~v~~~~~~Gdvvl~~~~-~~H~~~~n~s---~~~R~~~~~~~~ 257 (269)
.+.+..++||++|||-+ ++|+..+-.. +..|++.-+...
T Consensus 296 ~~~~~w~pGDv~i~DNr~vlH~R~~f~~~~~~~~R~L~R~~i~ 338 (358)
T 2wbq_A 296 LYELVLDQGDVAFIDNRRAVHGRRAFQPRYDGRDRWLKRINIT 338 (358)
T ss_dssp CEEEECCTTCEEEEETTTEEEEECCCCCCCSSCCCEEEEEEEE
T ss_pred ceEEeecCCCEEEEeCcccccCCCCCCCCCCCCCceEEEEEEe
Confidence 57888999999999986 6999876442 335665555443
No 28
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=62.43 E-value=6.9 Score=28.21 Aligned_cols=31 Identities=16% Similarity=0.198 Sum_probs=23.1
Q ss_pred eeeeecCccEEEEeCccccCCCCCCCCC-CceE
Q 024285 220 VPIEVKAGSLVLIHGDLIHQSFENQSSK-SRHA 251 (269)
Q Consensus 220 v~~~~~~Gdvvl~~~~~~H~~~~n~s~~-~R~~ 251 (269)
....+++||++++.+...|+.. |.++. .++.
T Consensus 96 ~~~~l~~Gd~i~i~~~~~H~~~-n~~~~~~~~l 127 (133)
T 1o4t_A 96 KDVPIKAGDVCFTDSGESHSIE-NTGNTDLEFL 127 (133)
T ss_dssp EEEEEETTEEEEECTTCEEEEE-CCSSSCEEEE
T ss_pred EEEEeCCCcEEEECCCCcEEeE-ECCCCCEEEE
Confidence 3578999999999999999965 44433 3443
No 29
>2og5_A Putative oxygenase; non-ribosomal peptide synthesis, iron(II)/alpha-ketoglutarat dependent hydroxylase, jelly-roll fold; 1.45A {Streptomyces coelicolor} PDB: 2og6_A 2og7_A*
Probab=62.10 E-value=8.6 Score=33.08 Aligned_cols=40 Identities=18% Similarity=0.231 Sum_probs=29.2
Q ss_pred eeeeeecCccEEEEeCc-cccCCCCCCC---CCCceEEEEEEEe
Q 024285 219 FVPIEVKAGSLVLIHGD-LIHQSFENQS---SKSRHAYSLHVVE 258 (269)
Q Consensus 219 ~v~~~~~~Gdvvl~~~~-~~H~~~~n~s---~~~R~~~~~~~~~ 258 (269)
.+.+.+++||++|||-+ ++|+..+-.. +..|++.-+....
T Consensus 291 ~~~~~w~pGDivi~DN~~vlH~R~~f~d~~~~~~R~L~R~~i~~ 334 (357)
T 2og5_A 291 AVTHRLLPGELAIVDNRVTVHGRTEFTPRYDGTDRWLQRTFVLT 334 (357)
T ss_dssp CEEECCCTTCEEEEETTTEEEEECCCCCCCSSCSCEEEEEEEES
T ss_pred eEEEeeCCCCEEEEeCCccccCCCCCCCCCCCCCcEEEEEEEcc
Confidence 57889999999999986 7999876543 3456655555443
No 30
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=61.54 E-value=7.7 Score=30.38 Aligned_cols=46 Identities=11% Similarity=0.322 Sum_probs=33.2
Q ss_pred CeeeeeecCccEEEEeCccccCCCCCCCCCCceEEEEEEEeCCCcccCCC
Q 024285 218 DFVPIEVKAGSLVLIHGDLIHQSFENQSSKSRHAYSLHVVETDGCRWSQE 267 (269)
Q Consensus 218 ~~v~~~~~~Gdvvl~~~~~~H~~~~n~s~~~R~~~~~~~~~~~~~~~~~~ 267 (269)
.+..+.+++||+++..+.+.|+-... +. ..+..++++... ..|.+.
T Consensus 125 ~~~~i~v~~GDlIiIPaG~~H~f~~~--~~-~~~~airlF~~~-~~W~~~ 170 (191)
T 1vr3_A 125 KWIRISMEKGDMITLPAGIYHRFTLD--EK-NYVKAMRLFVGE-PVWTPY 170 (191)
T ss_dssp CEEEEEEETTEEEEECTTCCEEEEEC--TT-CCEEEEEEESSS-CCCCCE
T ss_pred eEEEEEECCCCEEEECcCCcCCcccC--CC-CCEEEEEEECCC-CCccCC
Confidence 34568999999999999999986532 12 456777777763 567653
No 31
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=61.42 E-value=7.6 Score=26.49 Aligned_cols=22 Identities=27% Similarity=0.354 Sum_probs=19.5
Q ss_pred eeeecCccEEEEeCccccCCCC
Q 024285 221 PIEVKAGSLVLIHGDLIHQSFE 242 (269)
Q Consensus 221 ~~~~~~Gdvvl~~~~~~H~~~~ 242 (269)
...+++||++++.+...|+...
T Consensus 63 ~~~l~~Gd~~~i~~~~~H~~~~ 84 (113)
T 2gu9_A 63 TQALQAGSLIAIERGQAHEIRN 84 (113)
T ss_dssp EEEECTTEEEEECTTCCEEEEC
T ss_pred EEEeCCCCEEEECCCCcEEeEc
Confidence 5789999999999999999653
No 32
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=61.15 E-value=7.3 Score=26.03 Aligned_cols=22 Identities=9% Similarity=0.007 Sum_probs=19.6
Q ss_pred eeeecCccEEEEeCccccCCCC
Q 024285 221 PIEVKAGSLVLIHGDLIHQSFE 242 (269)
Q Consensus 221 ~~~~~~Gdvvl~~~~~~H~~~~ 242 (269)
...+++||++++.+...|+...
T Consensus 68 ~~~l~~Gd~~~ip~~~~H~~~~ 89 (105)
T 1v70_A 68 EALLAPGMAAFAPAGAPHGVRN 89 (105)
T ss_dssp EEEECTTCEEEECTTSCEEEEC
T ss_pred EEEeCCCCEEEECCCCcEEeEe
Confidence 5789999999999999998753
No 33
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=59.39 E-value=8.1 Score=33.75 Aligned_cols=42 Identities=14% Similarity=0.226 Sum_probs=30.0
Q ss_pred CCeeeeeecCccEEEEeCc-cccCCCCCCCC-C-CceEEEEEEEeC
Q 024285 217 NDFVPIEVKAGSLVLIHGD-LIHQSFENQSS-K-SRHAYSLHVVET 259 (269)
Q Consensus 217 ~~~v~~~~~~Gdvvl~~~~-~~H~~~~n~s~-~-~R~~~~~~~~~~ 259 (269)
...+...+++||++|||-+ ++|+...-... . .|+ +.-.|...
T Consensus 326 ~~~~~~~~~pGd~vi~DNr~~lH~R~~f~~~~~~~R~-L~r~yi~~ 370 (388)
T 3o2g_A 326 ESKFTFKMNPGDVITFDNWRLLHGRRSYEAGTEISRH-LEGAYADW 370 (388)
T ss_dssp TTCEEECCCTTCEEEEETTTEEEEECCCCCCSSCSCE-EEEEEECH
T ss_pred hhEEEEEcCCCcEEEEeCcEEeeCCCCcCCCCCCCEE-EEEEEEcc
Confidence 3568899999999999986 69998865542 2 455 45555543
No 34
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=59.16 E-value=9.2 Score=27.56 Aligned_cols=23 Identities=22% Similarity=0.163 Sum_probs=19.9
Q ss_pred eeeeecCccEEEEeCccccCCCC
Q 024285 220 VPIEVKAGSLVLIHGDLIHQSFE 242 (269)
Q Consensus 220 v~~~~~~Gdvvl~~~~~~H~~~~ 242 (269)
....+++||++++.+...|+...
T Consensus 79 ~~~~l~~Gd~~~ip~~~~H~~~~ 101 (145)
T 3ht1_A 79 RTEEVGPGEAIFIPRGEPHGFVT 101 (145)
T ss_dssp EEEEECTTCEEEECTTCCBEEEC
T ss_pred EEEEECCCCEEEECCCCeEEeEc
Confidence 35789999999999999998653
No 35
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=57.88 E-value=17 Score=28.08 Aligned_cols=45 Identities=9% Similarity=0.147 Sum_probs=30.8
Q ss_pred CeeeeeecCccEEEEeCccccCCCCCCCCCCceEEEEEEEeCCCcccCC
Q 024285 218 DFVPIEVKAGSLVLIHGDLIHQSFENQSSKSRHAYSLHVVETDGCRWSQ 266 (269)
Q Consensus 218 ~~v~~~~~~Gdvvl~~~~~~H~~~~n~s~~~R~~~~~~~~~~~~~~~~~ 266 (269)
....+.+++||+++..+.+.|+-.. . +. .+...++++... ..|.+
T Consensus 120 ~~~~~~l~~GDli~IP~g~~H~~~~-~-~~-~~~~~ir~F~~~-~~w~~ 164 (179)
T 1zrr_A 120 EVFQVLCEKNDLISVPAHTPHWFDM-G-SE-PNFTAIRIFDNP-EGWIA 164 (179)
T ss_dssp CEEEEECCCSCEEEECTTCCBCCCC-S-SC-SSCEEEEEECCG-GGEES
T ss_pred EEEEEEECCCCEEEECCCCeEeeec-C-CC-ceEEEEEeccCC-CCccc
Confidence 4556789999999999999998653 2 22 355566666653 44543
No 36
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=56.21 E-value=15 Score=28.83 Aligned_cols=39 Identities=15% Similarity=0.217 Sum_probs=30.5
Q ss_pred CeeeeeecCccEEEEeCcc----ccCCCCCCC-CCCceEEEEEE
Q 024285 218 DFVPIEVKAGSLVLIHGDL----IHQSFENQS-SKSRHAYSLHV 256 (269)
Q Consensus 218 ~~v~~~~~~Gdvvl~~~~~----~H~~~~n~s-~~~R~~~~~~~ 256 (269)
..+.+.++.||+++|.+.+ .|+..+... ...|.++++|.
T Consensus 158 ~~~~~~L~~GsllvM~g~~q~~w~H~Ip~~~~~~~~RislTFR~ 201 (204)
T 3s57_A 158 AVVRLPLAHGSLLMMNHPTNTHWYHSLPVRKKVLAPRVNLTFRK 201 (204)
T ss_dssp CCEEEEECTTEEEEEETTHHHHEEEEECCCTTCCSCEEEEEEEC
T ss_pred ceEEEECCCCCEEEECchhhheeEeeccccCCCCCCEEEEEeee
Confidence 4678999999999999975 377665442 46899999874
No 37
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=55.75 E-value=7.6 Score=27.38 Aligned_cols=25 Identities=20% Similarity=0.408 Sum_probs=20.5
Q ss_pred eeeecCccEEEEeCccccCCCCCCCC
Q 024285 221 PIEVKAGSLVLIHGDLIHQSFENQSS 246 (269)
Q Consensus 221 ~~~~~~Gdvvl~~~~~~H~~~~n~s~ 246 (269)
...+++||++++.+..+|+.. |.++
T Consensus 80 ~~~l~~Gd~~~i~~~~~H~~~-n~~~ 104 (125)
T 3h8u_A 80 VTHLKAGDIAIAKPGQVHGAM-NSGP 104 (125)
T ss_dssp EEEEETTEEEEECTTCCCEEE-ECSS
T ss_pred EEEeCCCCEEEECCCCEEEeE-eCCC
Confidence 468999999999999999865 4433
No 38
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=55.66 E-value=1.7 Score=30.24 Aligned_cols=21 Identities=19% Similarity=0.129 Sum_probs=18.8
Q ss_pred eeeecCccEEEEeCccccCCC
Q 024285 221 PIEVKAGSLVLIHGDLIHQSF 241 (269)
Q Consensus 221 ~~~~~~Gdvvl~~~~~~H~~~ 241 (269)
...+++||++++.+...|+-.
T Consensus 69 ~~~l~~GD~i~ip~g~~H~~~ 89 (101)
T 1o5u_A 69 KYVIEKGDLVTFPKGLRCRWK 89 (101)
T ss_dssp EEEEETTCEEEECTTCEEEEE
T ss_pred EEEECCCCEEEECCCCcEEEE
Confidence 478999999999999999864
No 39
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=55.04 E-value=8.7 Score=29.80 Aligned_cols=25 Identities=20% Similarity=0.300 Sum_probs=21.5
Q ss_pred CeeeeeecCccEEEEeCccccCCCC
Q 024285 218 DFVPIEVKAGSLVLIHGDLIHQSFE 242 (269)
Q Consensus 218 ~~v~~~~~~Gdvvl~~~~~~H~~~~ 242 (269)
..+...+++||++++.+...|+...
T Consensus 117 ~~~~~~l~~GD~v~ip~g~~H~~~N 141 (190)
T 1x82_A 117 DAKWISMEPGTVVYVPPYWAHRTVN 141 (190)
T ss_dssp CEEEEEECTTCEEEECTTCEEEEEE
T ss_pred cEEEEEECCCcEEEECCCCeEEEEE
Confidence 4567899999999999999999653
No 40
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=54.92 E-value=17 Score=27.55 Aligned_cols=31 Identities=23% Similarity=0.033 Sum_probs=23.3
Q ss_pred eeeecCccEEEEeCccccCCCCCCCCC-CceEE
Q 024285 221 PIEVKAGSLVLIHGDLIHQSFENQSSK-SRHAY 252 (269)
Q Consensus 221 ~~~~~~Gdvvl~~~~~~H~~~~n~s~~-~R~~~ 252 (269)
...+++||++++.+..+|+.. |.++. .++..
T Consensus 92 ~~~l~~GD~i~ip~g~~H~~~-n~~~~~~~~l~ 123 (166)
T 3jzv_A 92 VSAVAPYDLVTIPGWSWHQFR-APADEALGFLC 123 (166)
T ss_dssp EEEECTTCEEEECTTCCEEEE-CCTTSCEEEEE
T ss_pred EEEeCCCCEEEECCCCcEEeE-eCCCCCEEEEE
Confidence 578999999999999999875 44443 34433
No 41
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=54.73 E-value=9.2 Score=26.99 Aligned_cols=37 Identities=24% Similarity=0.178 Sum_probs=25.3
Q ss_pred eeeecCccEEEEeCccccCCCCCCCCCCceEEEEEEEe
Q 024285 221 PIEVKAGSLVLIHGDLIHQSFENQSSKSRHAYSLHVVE 258 (269)
Q Consensus 221 ~~~~~~Gdvvl~~~~~~H~~~~n~s~~~R~~~~~~~~~ 258 (269)
...+++||++++.+...|+.. |.++.+-..+.+.+.+
T Consensus 67 ~~~l~~Gd~i~i~~~~~H~~~-~~~~~~~~~~~i~~~~ 103 (125)
T 3cew_A 67 KIELQAGDWLRIAPDGKRQIS-AASDSPIGFLCIQVKA 103 (125)
T ss_dssp EEEEETTEEEEECTTCCEEEE-EBTTBCEEEEEEEEET
T ss_pred EEEeCCCCEEEECCCCcEEEE-cCCCCCEEEEEEEcCC
Confidence 478999999999999999865 3433333334444443
No 42
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=54.53 E-value=50 Score=27.77 Aligned_cols=76 Identities=14% Similarity=0.179 Sum_probs=0.0
Q ss_pred CCcccCCCCCccCCCceeEEeEeeeeccCCCceEEEEcCCCCCCCccceeeCCCCccccCCCCCCCCCCeeeeeecCccE
Q 024285 150 VVPHQDNSFLITEPSTCTGLWLALEDATIINGCLWAIPGSHKNGLVRRFIRGEEGVYFDRPPPSYDQNDFVPIEVKAGSL 229 (269)
Q Consensus 150 ~~wH~D~~~~~~~~~~~v~~~i~L~d~~~~~G~l~vipGSH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~Gdv 229 (269)
.+.|.|... +-|-+.| .+-|+|+|.+. .+++.+...+|.+
T Consensus 174 ~~~HtD~g~----------lTlL~qd--~~v~GLQV~~~----------------------------g~Wi~V~p~pgal 213 (319)
T 1w9y_A 174 LRAHTDAGG----------IILLFQD--DKVSGLQLLKD----------------------------GQWIDVPPMRHSI 213 (319)
T ss_dssp CCCBCCSSS----------EEEEEES--SSCCCEEEEET----------------------------TEEEECCCCTTCE
T ss_pred cccccCCCc----------eEEEEec--CCCCeeeEeeC----------------------------CeEEEcccCCCcE
Q ss_pred EEEeCc------------cccCCCCCCCCCCceEEEEEEEeCCCcccCC
Q 024285 230 VLIHGD------------LIHQSFENQSSKSRHAYSLHVVETDGCRWSQ 266 (269)
Q Consensus 230 vl~~~~------------~~H~~~~n~s~~~R~~~~~~~~~~~~~~~~~ 266 (269)
|+.-+. ++||+..|. ...|+++.+-+.+..++...+
T Consensus 214 vVNiGD~l~~~SnG~~kS~~HRVv~~~-~~~R~Sia~F~~p~~d~~i~p 261 (319)
T 1w9y_A 214 VVNLGDQLEVITNGKYKSVMHRVIAQK-DGARMSLASFYNPGSDAVIYP 261 (319)
T ss_dssp EEEECHHHHHHTTTSSCCCCEEECCCS-SSCCEEEEEEEECCTTCEECC
T ss_pred EEEhHHHHHHHhCCeeecccceecCCC-CCCceEEEEEecCCCCCeEeC
No 43
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=53.87 E-value=11 Score=28.30 Aligned_cols=34 Identities=21% Similarity=0.136 Sum_probs=24.4
Q ss_pred eeeecCccEEEEeCccccCCCCCCCCC-CceEEEEE
Q 024285 221 PIEVKAGSLVLIHGDLIHQSFENQSSK-SRHAYSLH 255 (269)
Q Consensus 221 ~~~~~~Gdvvl~~~~~~H~~~~n~s~~-~R~~~~~~ 255 (269)
...+++||++++.+..+|+.. |.++. .+....+.
T Consensus 83 ~~~l~~Gd~i~ip~~~~H~~~-n~g~~~~~~l~i~~ 117 (156)
T 3kgz_A 83 ISDVAQGDLVFIPPMTWHQFR-ANRGDCLGFLCVVN 117 (156)
T ss_dssp EEEEETTCEEEECTTCCEEEE-CCSSSCEEEEEEEE
T ss_pred EEEeCCCCEEEECCCCcEEeE-eCCCCCEEEEEEEe
Confidence 578999999999999999875 44443 44433333
No 44
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=53.74 E-value=15 Score=29.08 Aligned_cols=43 Identities=12% Similarity=0.186 Sum_probs=32.0
Q ss_pred CeeeeeecCccEEEEeCcc---ccCCCCCCCC------CCceEEEEEEEeCC
Q 024285 218 DFVPIEVKAGSLVLIHGDL---IHQSFENQSS------KSRHAYSLHVVETD 260 (269)
Q Consensus 218 ~~v~~~~~~Gdvvl~~~~~---~H~~~~n~s~------~~R~~~~~~~~~~~ 260 (269)
..+.+.++.||+++|.+.+ .|+..+.... ..|..+++|.....
T Consensus 154 ~~~~i~L~~GsllvM~G~~r~~~H~I~~~~~~~~p~~~~~RIsLTFR~~~~~ 205 (211)
T 3i3q_A 154 PLKRLLLEHGDVVVWGGESRLFYHGIQPLKAGFHPLTIDCRYNLTFRQAGKK 205 (211)
T ss_dssp CCEEEEECTTCEEEECGGGTTCCEEECCCCCCCBTTTBTCEEEEEEECCSCC
T ss_pred ceEEEECCCCCEEEECchHHceEeccCcccCCcCCCCCCCEEEEEeeeccCC
Confidence 3567999999999998864 5776654432 35999999977654
No 45
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=52.31 E-value=15 Score=27.36 Aligned_cols=24 Identities=17% Similarity=0.007 Sum_probs=20.7
Q ss_pred eeeeeecCccEEEEeCccccCCCC
Q 024285 219 FVPIEVKAGSLVLIHGDLIHQSFE 242 (269)
Q Consensus 219 ~v~~~~~~Gdvvl~~~~~~H~~~~ 242 (269)
.....+++||++++.+.+.|+...
T Consensus 87 ~~~~~l~~Gd~i~ip~~~~H~~~n 110 (163)
T 1lr5_A 87 PQEIPFFQNTTFSIPVNDPHQVWN 110 (163)
T ss_dssp CEEEEECTTEEEEECTTCCEEEEC
T ss_pred cEEEEeCCCCEEEECCCCcEEeEe
Confidence 356799999999999999998753
No 46
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=52.16 E-value=10 Score=26.95 Aligned_cols=22 Identities=18% Similarity=0.235 Sum_probs=19.5
Q ss_pred eeeecCccEEEEeCccccCCCC
Q 024285 221 PIEVKAGSLVLIHGDLIHQSFE 242 (269)
Q Consensus 221 ~~~~~~Gdvvl~~~~~~H~~~~ 242 (269)
...+++||++++.+...|+...
T Consensus 87 ~~~l~~Gd~i~ip~g~~H~~~~ 108 (126)
T 1vj2_A 87 EETVEEGFYIFVEPNEIHGFRN 108 (126)
T ss_dssp EEEEETTEEEEECTTCCEEEEC
T ss_pred EEEECCCCEEEECCCCcEEeEe
Confidence 4789999999999999999753
No 47
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=52.16 E-value=9.6 Score=27.97 Aligned_cols=23 Identities=22% Similarity=0.125 Sum_probs=20.0
Q ss_pred eeeeecCccEEEEeCccccCCCC
Q 024285 220 VPIEVKAGSLVLIHGDLIHQSFE 242 (269)
Q Consensus 220 v~~~~~~Gdvvl~~~~~~H~~~~ 242 (269)
....+++||++++.+.+.|+...
T Consensus 88 ~~~~l~~Gd~i~ip~g~~H~~~n 110 (148)
T 2oa2_A 88 FQEEVFDDYAILIPAGTWHNVRN 110 (148)
T ss_dssp EEEEEETTCEEEECTTCEEEEEE
T ss_pred eeEEECCCCEEEECCCCcEEEEE
Confidence 45789999999999999998763
No 48
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=52.07 E-value=16 Score=29.47 Aligned_cols=43 Identities=21% Similarity=0.326 Sum_probs=34.4
Q ss_pred CCeeeeeecCccEEEEeCcc---c-cCCCCCC-CCCCceEEEEEEEeC
Q 024285 217 NDFVPIEVKAGSLVLIHGDL---I-HQSFENQ-SSKSRHAYSLHVVET 259 (269)
Q Consensus 217 ~~~v~~~~~~Gdvvl~~~~~---~-H~~~~n~-s~~~R~~~~~~~~~~ 259 (269)
...+.+.++.||+++|.+.+ | |+..+.. ....|..+++|....
T Consensus 184 ~~~~~i~L~~gsllvM~G~~r~~w~H~I~~~~~~~~~RIsLTfR~v~~ 231 (238)
T 2iuw_A 184 VERVKIPLDHGTLLIMEGATQADWQHRVPKEYHSREPRVNLTFRTVYP 231 (238)
T ss_dssp CCEEEEEECTTCEEEEEETHHHHEEEEECCCSSCCCCEEEEEEECCCC
T ss_pred CceEEEEcCCCCEEEEChhhhCccEecCCCcCCCCCCEEEEEeeeccc
Confidence 35788999999999999975 4 9887643 346899999998764
No 49
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=51.04 E-value=9.6 Score=26.89 Aligned_cols=22 Identities=27% Similarity=0.401 Sum_probs=19.5
Q ss_pred eeeecCccEEEEeCccccCCCC
Q 024285 221 PIEVKAGSLVLIHGDLIHQSFE 242 (269)
Q Consensus 221 ~~~~~~Gdvvl~~~~~~H~~~~ 242 (269)
...+++||++++.+...|+...
T Consensus 73 ~~~l~~Gd~~~i~~~~~H~~~~ 94 (128)
T 4i4a_A 73 DFPVTKGDLIIIPLDSEHHVIN 94 (128)
T ss_dssp EEEEETTCEEEECTTCCEEEEE
T ss_pred EEEECCCcEEEECCCCcEEeEe
Confidence 5789999999999999998653
No 50
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=50.59 E-value=12 Score=27.32 Aligned_cols=23 Identities=17% Similarity=0.225 Sum_probs=19.7
Q ss_pred eeeeecCccEEEEeCccccCCCC
Q 024285 220 VPIEVKAGSLVLIHGDLIHQSFE 242 (269)
Q Consensus 220 v~~~~~~Gdvvl~~~~~~H~~~~ 242 (269)
....+++||+++.++..+|+...
T Consensus 56 ~~~~l~~Gd~~~i~p~~~H~~~~ 78 (164)
T 2arc_A 56 REFVCRPGDILLFPPGEIHHYGR 78 (164)
T ss_dssp EEEEECTTCEEEECTTCCEEEEE
T ss_pred EEEEecCCeEEEEcCCCCEEEEe
Confidence 45789999999999999998543
No 51
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=49.88 E-value=57 Score=27.89 Aligned_cols=81 Identities=21% Similarity=0.277 Sum_probs=0.0
Q ss_pred CCCCCCCCcccCCCCCccCCCceeEEeEeeeeccCCCceEEEEcCCCCCCCccceeeCCCCccccCCCCCCCCCCeeeee
Q 024285 144 PGIGGEVVPHQDNSFLITEPSTCTGLWLALEDATIINGCLWAIPGSHKNGLVRRFIRGEEGVYFDRPPPSYDQNDFVPIE 223 (269)
Q Consensus 144 p~~~~~~~wH~D~~~~~~~~~~~v~~~i~L~d~~~~~G~l~vipGSH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 223 (269)
|...-..+.|.|... +-|-+.| +-|+|+|... .+++.+.
T Consensus 223 ~~~~~g~~~HtD~g~----------lTlL~qd---~v~GLQV~~~----------------------------g~Wi~V~ 261 (356)
T 1gp6_A 223 PELALGVEAHTDVSA----------LTFILHN---MVPGLQLFYE----------------------------GKWVTAK 261 (356)
T ss_dssp TTTCCSEEEECCCSS----------EEEEEEC---SCCCEEEEET----------------------------TEEEECC
T ss_pred cccccCcCCccCCCe----------EEEEEEc---CCCCeEEecC----------------------------CcEEECc
Q ss_pred ecCccEEEEeCc------------cccCCCCCCCCCCceEEEEEEEeCCCc-ccCC
Q 024285 224 VKAGSLVLIHGD------------LIHQSFENQSSKSRHAYSLHVVETDGC-RWSQ 266 (269)
Q Consensus 224 ~~~Gdvvl~~~~------------~~H~~~~n~s~~~R~~~~~~~~~~~~~-~~~~ 266 (269)
..+|.+|+.-+. ++||+..|. ...|+++.+-+.+..++ ...+
T Consensus 262 p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~-~~~R~Sia~F~~P~~d~~~i~p 316 (356)
T 1gp6_A 262 CVPDSIVMHIGDTLEILSNGKYKSILHRGLVNK-EKVRISWAVFCEPPKDKIVLKP 316 (356)
T ss_dssp CCTTCEEEEECHHHHHHTTTSSCCCCEEECCCS-SCCEEEEEEEEECCTTTCEECC
T ss_pred CCCCeEEEEeccHHHHhcCCEeeccCceecCCC-CCCEEEEEEeecCCCCCcEEeC
No 52
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=49.17 E-value=9.4 Score=28.43 Aligned_cols=26 Identities=15% Similarity=0.199 Sum_probs=20.8
Q ss_pred eeeecCccEEEEeCc-cccCCCCCCCCC
Q 024285 221 PIEVKAGSLVLIHGD-LIHQSFENQSSK 247 (269)
Q Consensus 221 ~~~~~~Gdvvl~~~~-~~H~~~~n~s~~ 247 (269)
...+++||++++.+. ..|+.. |.++.
T Consensus 87 ~~~l~~Gd~i~i~~~~~~H~~~-n~~~~ 113 (162)
T 3l2h_A 87 QYPIAPGDFVGFPCHAAAHSIS-NDGTE 113 (162)
T ss_dssp EEEECTTCEEEECTTSCCEEEE-CCSSS
T ss_pred EEEeCCCCEEEECCCCceEEeE-eCCCC
Confidence 478999999999998 999865 44443
No 53
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=48.16 E-value=11 Score=25.27 Aligned_cols=27 Identities=19% Similarity=0.172 Sum_probs=22.1
Q ss_pred eeeeecCccEEEEeCccccCCCCCCCCC
Q 024285 220 VPIEVKAGSLVLIHGDLIHQSFENQSSK 247 (269)
Q Consensus 220 v~~~~~~Gdvvl~~~~~~H~~~~n~s~~ 247 (269)
....+++||++.+.+...|+.. |.++.
T Consensus 59 ~~~~l~~Gd~~~~p~~~~H~~~-N~g~~ 85 (97)
T 2fqp_A 59 VTSQLTRGVSYTRPEGVEHNVI-NPSDT 85 (97)
T ss_dssp EEEEECTTCCEEECTTCEEEEE-CCSSS
T ss_pred EEEEEcCCCEEEeCCCCcccCE-eCCCC
Confidence 4678999999999999999975 55444
No 54
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=48.10 E-value=11 Score=28.44 Aligned_cols=26 Identities=15% Similarity=0.097 Sum_probs=21.1
Q ss_pred eeeecCccEEEEeCc--cccCCCCCCCCC
Q 024285 221 PIEVKAGSLVLIHGD--LIHQSFENQSSK 247 (269)
Q Consensus 221 ~~~~~~Gdvvl~~~~--~~H~~~~n~s~~ 247 (269)
...+++||++++.+. ..|+.. |.++.
T Consensus 84 ~~~l~~GD~i~ip~~~~~~H~~~-n~~~~ 111 (163)
T 3i7d_A 84 EHPMVPGDCAAFPAGDPNGHQFV-NRTDA 111 (163)
T ss_dssp EEEECTTCEEEECTTCCCCBEEE-CCSSS
T ss_pred EEEeCCCCEEEECCCCCcceEEE-ECCCC
Confidence 578999999999999 999876 44433
No 55
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=48.07 E-value=8.7 Score=26.73 Aligned_cols=20 Identities=15% Similarity=0.152 Sum_probs=18.0
Q ss_pred eecCccEEEEeCccccCCCC
Q 024285 223 EVKAGSLVLIHGDLIHQSFE 242 (269)
Q Consensus 223 ~~~~Gdvvl~~~~~~H~~~~ 242 (269)
.+++||++++.+...|+...
T Consensus 69 ~l~~Gd~i~ip~~~~H~~~~ 88 (117)
T 2b8m_A 69 NYKEGNIVYVPFNVKMLIQN 88 (117)
T ss_dssp EEETTCEEEECTTCEEEEEC
T ss_pred EeCCCCEEEECCCCcEEeEc
Confidence 78999999999999998653
No 56
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=46.69 E-value=12 Score=25.80 Aligned_cols=22 Identities=14% Similarity=0.279 Sum_probs=19.4
Q ss_pred eeeecCccEEEEeCccccCCCC
Q 024285 221 PIEVKAGSLVLIHGDLIHQSFE 242 (269)
Q Consensus 221 ~~~~~~Gdvvl~~~~~~H~~~~ 242 (269)
...+++||++++.+...|+...
T Consensus 77 ~~~l~~Gd~i~i~~~~~H~~~~ 98 (114)
T 2ozj_A 77 KIDLVPEDVLMVPAHKIHAIAG 98 (114)
T ss_dssp EEEECTTCEEEECTTCCBEEEE
T ss_pred EEEecCCCEEEECCCCcEEEEe
Confidence 5689999999999999998653
No 57
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=45.52 E-value=14 Score=28.41 Aligned_cols=22 Identities=9% Similarity=0.128 Sum_probs=19.8
Q ss_pred eeeeecCccEEEEeCccccCCC
Q 024285 220 VPIEVKAGSLVLIHGDLIHQSF 241 (269)
Q Consensus 220 v~~~~~~Gdvvl~~~~~~H~~~ 241 (269)
....+++||.+++.+...|+-.
T Consensus 162 ~~~~l~~GD~~~~~~~~~H~~~ 183 (198)
T 2bnm_A 162 KEALLPTGASMFVEEHVPHAFT 183 (198)
T ss_dssp EEEEECTTCEEEECTTCCEEEE
T ss_pred ccEEECCCCEEEeCCCCceEEE
Confidence 5679999999999999999865
No 58
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=45.17 E-value=11 Score=25.65 Aligned_cols=22 Identities=9% Similarity=0.401 Sum_probs=19.6
Q ss_pred eeeecCccEEEEeCccccCCCC
Q 024285 221 PIEVKAGSLVLIHGDLIHQSFE 242 (269)
Q Consensus 221 ~~~~~~Gdvvl~~~~~~H~~~~ 242 (269)
...+++||++++.+.+.|+...
T Consensus 68 ~~~l~~Gd~~~ip~~~~H~~~~ 89 (107)
T 2i45_A 68 SMTIREGEMAVVPKSVSHRPRS 89 (107)
T ss_dssp EEEECTTEEEEECTTCCEEEEE
T ss_pred EEEECCCCEEEECCCCcEeeEe
Confidence 5789999999999999998664
No 59
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=45.11 E-value=11 Score=25.11 Aligned_cols=22 Identities=23% Similarity=0.448 Sum_probs=19.3
Q ss_pred eeeecCccEEEEeCccccCCCC
Q 024285 221 PIEVKAGSLVLIHGDLIHQSFE 242 (269)
Q Consensus 221 ~~~~~~Gdvvl~~~~~~H~~~~ 242 (269)
...+++||++++.+...|+...
T Consensus 69 ~~~l~~Gd~~~ip~~~~H~~~~ 90 (102)
T 3d82_A 69 NITLQAGEMYVIPKGVEHKPMA 90 (102)
T ss_dssp EEEEETTEEEEECTTCCBEEEE
T ss_pred EEEEcCCCEEEECCCCeEeeEc
Confidence 5688999999999999998654
No 60
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=44.85 E-value=8.2 Score=28.46 Aligned_cols=21 Identities=24% Similarity=0.245 Sum_probs=18.7
Q ss_pred eeecCccEEEEeCccccCCCC
Q 024285 222 IEVKAGSLVLIHGDLIHQSFE 242 (269)
Q Consensus 222 ~~~~~Gdvvl~~~~~~H~~~~ 242 (269)
..+++||++++.+...|+...
T Consensus 89 ~~l~~Gd~i~ip~~~~H~~~n 109 (147)
T 2f4p_A 89 RILKKGDVVEIPPNVVHWHGA 109 (147)
T ss_dssp EEEETTCEEEECTTCCEEEEE
T ss_pred EEECCCCEEEECCCCcEEeEe
Confidence 689999999999999998654
No 61
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=43.07 E-value=20 Score=28.15 Aligned_cols=39 Identities=13% Similarity=0.300 Sum_probs=34.1
Q ss_pred eeeecCccEEEEeCccccCCCCCCCCCCceEEEEEEEeCC
Q 024285 221 PIEVKAGSLVLIHGDLIHQSFENQSSKSRHAYSLHVVETD 260 (269)
Q Consensus 221 ~~~~~~Gdvvl~~~~~~H~~~~n~s~~~R~~~~~~~~~~~ 260 (269)
...++.|.+++||-...|.+- |.++..|.++.+-+-..+
T Consensus 147 ~~~w~eGe~~~fDds~~Hev~-N~~d~~RvvL~~D~~rPd 185 (197)
T 3rcq_A 147 TKTWEEGKVLIFDDSFEHEVW-QDASSFRLIFIVDVWHPE 185 (197)
T ss_dssp EECCCBTCEEEECTTSCEEEE-ECSSSCEEEEEEEEECTT
T ss_pred EEEeeCCcEEEEcCCeEEEEE-ECCCCCEEEEEEeeeCCC
Confidence 467889999999999999988 667889999999987764
No 62
>2fho_A Spliceosomal protein SF3B155; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=43.07 E-value=16 Score=21.44 Aligned_cols=22 Identities=27% Similarity=0.436 Sum_probs=18.5
Q ss_pred CCCCCCHHHHHhhhhccEEEec
Q 024285 3 LAGNLNSDNLNFFNSQGYVVLE 24 (269)
Q Consensus 3 ~~~~lt~~~~~~f~~~Gyvvl~ 24 (269)
+...||+|+++..-=.||.|++
T Consensus 18 rnrpltDEeLD~~LP~GY~il~ 39 (47)
T 2fho_A 18 RNRPLSDEELDAMFPEGYKVLP 39 (47)
T ss_dssp CCCCSCTTHHHHHSCTTEEECC
T ss_pred ccCCCCHHHHHHhCCCCCeecC
Confidence 5567999999988878999986
No 63
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=41.84 E-value=19 Score=30.42 Aligned_cols=25 Identities=16% Similarity=0.337 Sum_probs=21.6
Q ss_pred eeeeecCccEEEEeCccccCCCCCC
Q 024285 220 VPIEVKAGSLVLIHGDLIHQSFENQ 244 (269)
Q Consensus 220 v~~~~~~Gdvvl~~~~~~H~~~~n~ 244 (269)
-.+.+++||+++..+.++|+-+...
T Consensus 158 n~v~l~pGd~~~ipaGt~HA~~~G~ 182 (319)
T 1qwr_A 158 RRIKIKPGDFYYVPSGTLHALCKGA 182 (319)
T ss_dssp EEEECCTTCEEEECTTCCEEECSSE
T ss_pred eEEEcCCCCEEEcCCCCceEecCCC
Confidence 4678999999999999999977643
No 64
>3lqv_P Splicing factor 3B subunit 1; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} PDB: 2f9d_P 2f9j_P
Probab=41.04 E-value=17 Score=20.38 Aligned_cols=21 Identities=29% Similarity=0.464 Sum_probs=16.4
Q ss_pred CCCCCCHHHHHhhhhccEEEe
Q 024285 3 LAGNLNSDNLNFFNSQGYVVL 23 (269)
Q Consensus 3 ~~~~lt~~~~~~f~~~Gyvvl 23 (269)
+...||+|++...-=.||-|+
T Consensus 19 RNrpltDEeLD~mLP~GYkIl 39 (39)
T 3lqv_P 19 RNRPLSDEELDAMFPEGYKVL 39 (39)
T ss_dssp TTCCCCHHHHHHTCCSSEEEC
T ss_pred hcCCCCHHHHHHhCCCCcccC
Confidence 567788888888777788764
No 65
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=40.42 E-value=15 Score=24.80 Aligned_cols=22 Identities=14% Similarity=0.073 Sum_probs=19.2
Q ss_pred eeeecCccEEEEeCccccCCCC
Q 024285 221 PIEVKAGSLVLIHGDLIHQSFE 242 (269)
Q Consensus 221 ~~~~~~Gdvvl~~~~~~H~~~~ 242 (269)
...+++||++++.+...|+...
T Consensus 75 ~~~l~~Gd~~~ip~~~~H~~~~ 96 (110)
T 2q30_A 75 VIPAPRGAVLVAPISTPHGVRA 96 (110)
T ss_dssp EEEECTTEEEEEETTSCEEEEE
T ss_pred EEEECCCCEEEeCCCCcEEEEE
Confidence 5789999999999999998553
No 66
>2q4a_A Clavaminate synthase-like protein AT3G21360; ensemble refinement, refinement methodology development, AT3 structural genomics; 2.39A {Arabidopsis thaliana} SCOP: b.82.2.8 PDB: 1y0z_A
Probab=40.19 E-value=12 Score=31.53 Aligned_cols=33 Identities=18% Similarity=0.266 Sum_probs=24.2
Q ss_pred CeeeeeecCccEEEEeCc-cccCCCCCCCCCCceE
Q 024285 218 DFVPIEVKAGSLVLIHGD-LIHQSFENQSSKSRHA 251 (269)
Q Consensus 218 ~~v~~~~~~Gdvvl~~~~-~~H~~~~n~s~~~R~~ 251 (269)
..+....++||++|||-+ ++|+..+- .+..|.+
T Consensus 292 ~~~~~~w~~GDv~i~DN~~~lH~R~~f-~g~rR~l 325 (330)
T 2q4a_A 292 ECVAVPWQRGDVLLIDNWAVLHSRRPF-DPPRRVL 325 (330)
T ss_dssp HCBCCCCCTTCEEEEETTTEEEEECCE-ESCCEEE
T ss_pred hEeecCCCCCCEEEEecccccccCCCC-CCCceEE
Confidence 356788999999999875 79999874 3333433
No 67
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=39.65 E-value=26 Score=24.38 Aligned_cols=22 Identities=18% Similarity=0.252 Sum_probs=19.6
Q ss_pred eeeecCccEEEEeCccccCCCC
Q 024285 221 PIEVKAGSLVLIHGDLIHQSFE 242 (269)
Q Consensus 221 ~~~~~~Gdvvl~~~~~~H~~~~ 242 (269)
...+++||++++.+...|+...
T Consensus 80 ~~~l~~Gd~~~ip~~~~H~~~~ 101 (126)
T 4e2g_A 80 TRVLRPGMAYTIPGGVRHRART 101 (126)
T ss_dssp EEEECTTEEEEECTTCCEEEEC
T ss_pred EEEeCCCCEEEECCCCcEEeEE
Confidence 4789999999999999999763
No 68
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=38.69 E-value=19 Score=27.50 Aligned_cols=28 Identities=18% Similarity=0.128 Sum_probs=21.9
Q ss_pred eeeeecCccEEEEeCccccCCCCCCCCCC
Q 024285 220 VPIEVKAGSLVLIHGDLIHQSFENQSSKS 248 (269)
Q Consensus 220 v~~~~~~Gdvvl~~~~~~H~~~~n~s~~~ 248 (269)
....+++||++++++...|+-. |.++.+
T Consensus 144 ~~~~l~~GD~i~i~~~~~H~~~-n~~~~~ 171 (192)
T 1y9q_A 144 QWHELQQGEHIRFFSDQPHGYA-AVTEKA 171 (192)
T ss_dssp EEEEECTTCEEEEECSSSEEEE-ESSSCE
T ss_pred EEEEeCCCCEEEEcCCCCeEeE-CCCCCc
Confidence 3568999999999999999865 444443
No 69
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=38.20 E-value=28 Score=26.20 Aligned_cols=22 Identities=18% Similarity=0.018 Sum_probs=19.5
Q ss_pred eeeecCccEEEEeCccccCCCC
Q 024285 221 PIEVKAGSLVLIHGDLIHQSFE 242 (269)
Q Consensus 221 ~~~~~~Gdvvl~~~~~~H~~~~ 242 (269)
...+++||++++.+..+|+...
T Consensus 95 ~~~l~~Gd~i~ip~~~~H~~~n 116 (167)
T 3ibm_A 95 VEPLTPLDCVYIAPHAWHQIHA 116 (167)
T ss_dssp EEEECTTCEEEECTTCCEEEEE
T ss_pred EEEECCCCEEEECCCCcEEEEe
Confidence 5789999999999999998653
No 70
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=37.91 E-value=26 Score=29.32 Aligned_cols=41 Identities=12% Similarity=0.046 Sum_probs=30.6
Q ss_pred eeeeeecCccEEEEeCccccCCCCCCCCCCceEEEEEEEeCCCcccCCC
Q 024285 219 FVPIEVKAGSLVLIHGDLIHQSFENQSSKSRHAYSLHVVETDGCRWSQE 267 (269)
Q Consensus 219 ~v~~~~~~Gdvvl~~~~~~H~~~~n~s~~~R~~~~~~~~~~~~~~~~~~ 267 (269)
--.+.+++||+++..+.++|+-+.. ..+..++.||..|.+|
T Consensus 157 Ln~v~l~pGd~~~ipaGt~HA~~~G--------~~~Eiqa~SD~t~~pr 197 (300)
T 1zx5_A 157 LNTFETTPYDTFVIRPGIPHAGEGL--------RVLEVSSNSTLAYFFN 197 (300)
T ss_dssp EEEEECCTTCEEEECTTCCEEEESE--------EEEEEEESCCCCEESS
T ss_pred hceeECCCCCEEEcCCCCceEcCCC--------CeeeecccCCceeecc
Confidence 4567899999999999999997752 2566666666666443
No 71
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=36.38 E-value=79 Score=28.45 Aligned_cols=39 Identities=15% Similarity=0.207 Sum_probs=28.2
Q ss_pred CeeeeeecCccEEEEeCccccCCCCCCCCCCceEEEEEEE
Q 024285 218 DFVPIEVKAGSLVLIHGDLIHQSFENQSSKSRHAYSLHVV 257 (269)
Q Consensus 218 ~~v~~~~~~Gdvvl~~~~~~H~~~~n~s~~~R~~~~~~~~ 257 (269)
....+.+++||++.+-...||.+.... +..-..+++.+.
T Consensus 226 p~~e~~L~pGDvLYiP~g~~H~~~s~~-~~~SlhlTi~~~ 264 (489)
T 4diq_A 226 PVLQTVLEPGDLLYFPRGFIHQAECQD-GVHSLHLTLSTY 264 (489)
T ss_dssp CSEEEEECTTCEEEECTTCEEEEEBCS-SCCEEEEEEEEC
T ss_pred cceEEEECCCCEEEECCCCceEEEecC-CCceEEEeeccc
Confidence 456789999999999999999988643 233344444443
No 72
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=36.19 E-value=21 Score=24.48 Aligned_cols=22 Identities=14% Similarity=0.105 Sum_probs=19.5
Q ss_pred eeeecCccEEEEeCccccCCCC
Q 024285 221 PIEVKAGSLVLIHGDLIHQSFE 242 (269)
Q Consensus 221 ~~~~~~Gdvvl~~~~~~H~~~~ 242 (269)
...+++||++++.+...|+...
T Consensus 73 ~~~l~~Gd~~~ip~~~~H~~~~ 94 (116)
T 2pfw_A 73 IKVLTAGDSFFVPPHVDHGAVC 94 (116)
T ss_dssp EEEECTTCEEEECTTCCEEEEE
T ss_pred EEEeCCCCEEEECcCCceeeEe
Confidence 5789999999999999998653
No 73
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=35.58 E-value=20 Score=24.54 Aligned_cols=22 Identities=14% Similarity=0.368 Sum_probs=19.3
Q ss_pred eeeecCccEEEEeCccccCCCC
Q 024285 221 PIEVKAGSLVLIHGDLIHQSFE 242 (269)
Q Consensus 221 ~~~~~~Gdvvl~~~~~~H~~~~ 242 (269)
...+++||++++.+...|+...
T Consensus 79 ~~~l~~Gd~~~ip~~~~H~~~~ 100 (115)
T 1yhf_A 79 TYRVAEGQTIVMPAGIPHALYA 100 (115)
T ss_dssp EEEEETTCEEEECTTSCEEEEE
T ss_pred EEEECCCCEEEECCCCCEEEEE
Confidence 4689999999999999998653
No 74
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=35.44 E-value=15 Score=25.57 Aligned_cols=22 Identities=14% Similarity=0.240 Sum_probs=19.6
Q ss_pred eeeecCccEEEEeCccccCCCC
Q 024285 221 PIEVKAGSLVLIHGDLIHQSFE 242 (269)
Q Consensus 221 ~~~~~~Gdvvl~~~~~~H~~~~ 242 (269)
...+++||++++.+...|+...
T Consensus 75 ~~~l~~Gd~i~ip~~~~H~~~~ 96 (114)
T 3fjs_A 75 QRRLHQGDLLYLGAGAAHDVNA 96 (114)
T ss_dssp EEEECTTEEEEECTTCCEEEEE
T ss_pred EEEECCCCEEEECCCCcEEEEe
Confidence 5789999999999999998753
No 75
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=34.67 E-value=23 Score=27.53 Aligned_cols=27 Identities=30% Similarity=0.431 Sum_probs=21.7
Q ss_pred eeeeeecCccEEEEeCccccCCCCCCCC
Q 024285 219 FVPIEVKAGSLVLIHGDLIHQSFENQSS 246 (269)
Q Consensus 219 ~v~~~~~~Gdvvl~~~~~~H~~~~n~s~ 246 (269)
.....+++||++++...++|.-. |.++
T Consensus 118 ~~~~~l~~GD~~~iP~g~~H~~~-N~g~ 144 (201)
T 1fi2_A 118 LYSRVVRAGETFVIPRGLMHFQF-NVGK 144 (201)
T ss_dssp EEEEEEETTCEEEECTTCCEEEE-ECSS
T ss_pred EEEEEECCCCEEEECCCCeEEEE-eCCC
Confidence 34789999999999999999865 4433
No 76
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=33.65 E-value=18 Score=25.67 Aligned_cols=23 Identities=13% Similarity=0.226 Sum_probs=19.9
Q ss_pred eeeeecCccEEEEeCccccCCCC
Q 024285 220 VPIEVKAGSLVLIHGDLIHQSFE 242 (269)
Q Consensus 220 v~~~~~~Gdvvl~~~~~~H~~~~ 242 (269)
....+++||++++.+.+.|+...
T Consensus 83 ~~~~l~~Gd~~~ip~g~~H~~~~ 105 (134)
T 2o8q_A 83 GAVMLEAGGSAFQPPGVRHRELR 105 (134)
T ss_dssp EEEEEETTCEEECCTTCCEEEEE
T ss_pred EEEEecCCCEEEECCCCcEEeEe
Confidence 35789999999999999998654
No 77
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=33.44 E-value=34 Score=26.08 Aligned_cols=30 Identities=23% Similarity=0.357 Sum_probs=22.7
Q ss_pred eeeecCccEEEEeCccccCCCCCCCCC-CceEE
Q 024285 221 PIEVKAGSLVLIHGDLIHQSFENQSSK-SRHAY 252 (269)
Q Consensus 221 ~~~~~~Gdvvl~~~~~~H~~~~n~s~~-~R~~~ 252 (269)
...+++||++ +...+.|+-. |.++. .|..+
T Consensus 119 ~~~L~~GDsi-~~~g~~H~~~-N~g~~~ar~l~ 149 (172)
T 3es1_A 119 KRTVRQGGII-VQRGTNHLWR-NTTDKPCRIAF 149 (172)
T ss_dssp EEEECTTCEE-EECSCCBEEE-CCSSSCEEEEE
T ss_pred EEEECCCCEE-EeCCCcEEEE-eCCCCCEEEEE
Confidence 5689999999 9999999965 66554 44433
No 78
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=33.44 E-value=18 Score=29.67 Aligned_cols=35 Identities=11% Similarity=0.125 Sum_probs=24.7
Q ss_pred eeeeecCccEEEEeCccccCCCCCCC-CCCceEEEE
Q 024285 220 VPIEVKAGSLVLIHGDLIHQSFENQS-SKSRHAYSL 254 (269)
Q Consensus 220 v~~~~~~Gdvvl~~~~~~H~~~~n~s-~~~R~~~~~ 254 (269)
....+++||++++.+...|+-..... +..|+.++.
T Consensus 221 ~~~~l~~GD~i~i~~~~~H~~~n~~~~~~~~~l~~~ 256 (274)
T 1sef_A 221 EWYPVEKGDYIFMSAYVPQAAYAVGREEPLMYVYSK 256 (274)
T ss_dssp EEEEEETTCEEEECTTCCEEEEEECSSSCEEEEEEE
T ss_pred EEEEECCCCEEEECCCCCEEEEeCCCCCCEEEEEEE
Confidence 45789999999999999998653322 234554443
No 79
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=32.59 E-value=19 Score=29.06 Aligned_cols=33 Identities=12% Similarity=-0.041 Sum_probs=23.5
Q ss_pred eeeeecCccEEEEeCccccCCCCCCCCCCceEE
Q 024285 220 VPIEVKAGSLVLIHGDLIHQSFENQSSKSRHAY 252 (269)
Q Consensus 220 v~~~~~~Gdvvl~~~~~~H~~~~n~s~~~R~~~ 252 (269)
....+++||++++.+...|+-...-.+..|+.+
T Consensus 204 ~~~~l~~GD~~~~~~~~pH~~~n~g~~~~~yl~ 236 (246)
T 1sfn_A 204 NYYPVTAGDIIWMGAHCPQWYGALGRNWSKYLL 236 (246)
T ss_dssp EEEEEETTCEEEECTTCCEEEEEESSSCEEEEE
T ss_pred EEEEcCCCCEEEECCCCCEEEEcCCCCCEEEEE
Confidence 456999999999999999986532223345543
No 80
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=30.70 E-value=22 Score=27.89 Aligned_cols=25 Identities=16% Similarity=0.247 Sum_probs=21.8
Q ss_pred CCeeeeeecCccEEEEeCccccCCC
Q 024285 217 NDFVPIEVKAGSLVLIHGDLIHQSF 241 (269)
Q Consensus 217 ~~~v~~~~~~Gdvvl~~~~~~H~~~ 241 (269)
.....+.++|||+|+.=+.-||.+.
T Consensus 198 ~~~~~~~l~pGD~LyiP~gW~H~V~ 222 (235)
T 4gjz_A 198 APFLSCILSPGEILFIPVKYWHYVR 222 (235)
T ss_dssp CCCEEEEECTTCEEEECTTCEEEEE
T ss_pred CCcEEEEECCCCEEEeCCCCcEEEE
Confidence 3567889999999999999999875
No 81
>2k1g_A Lipoprotein SPR; solution structure, bacterial lipoprotein, cysteine PEPT NPLC/P60 family, construct optimized, membrane, palmitate; NMR {Escherichia coli}
Probab=30.64 E-value=18 Score=26.51 Aligned_cols=13 Identities=31% Similarity=0.636 Sum_probs=10.5
Q ss_pred eeecCccEEEEeC
Q 024285 222 IEVKAGSLVLIHG 234 (269)
Q Consensus 222 ~~~~~Gdvvl~~~ 234 (269)
-.++|||+|||..
T Consensus 66 ~~l~pGDLvFf~~ 78 (135)
T 2k1g_A 66 SNLRTGDLVLFRA 78 (135)
T ss_dssp GGCCTTEEEEEEE
T ss_pred HHccCCcEEEECC
Confidence 3578999999954
No 82
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=28.78 E-value=22 Score=29.27 Aligned_cols=34 Identities=15% Similarity=0.014 Sum_probs=24.9
Q ss_pred eeeeecCccEEEEeCccccCCCCCCCCCCceEEE
Q 024285 220 VPIEVKAGSLVLIHGDLIHQSFENQSSKSRHAYS 253 (269)
Q Consensus 220 v~~~~~~Gdvvl~~~~~~H~~~~n~s~~~R~~~~ 253 (269)
...++++||++++.+...|+-...-.+..|+.++
T Consensus 225 ~~~~V~~GD~i~~~~~~~h~~~n~G~e~~~yl~y 258 (266)
T 4e2q_A 225 NWYPVQAGDVIWMAPFVPQWYAALGKTRSRYLLY 258 (266)
T ss_dssp EEEEEETTCEEEECTTCCEEEEEESSSCEEEEEE
T ss_pred EEEEecCCCEEEECCCCcEEEEeCCCCCEEEEEE
Confidence 3578999999999999999876432334565543
No 83
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=28.27 E-value=59 Score=24.60 Aligned_cols=24 Identities=8% Similarity=0.050 Sum_probs=20.5
Q ss_pred eeeeeecCccEEEEeCccccCCCC
Q 024285 219 FVPIEVKAGSLVLIHGDLIHQSFE 242 (269)
Q Consensus 219 ~v~~~~~~Gdvvl~~~~~~H~~~~ 242 (269)
.....+++||++++...+.|.-..
T Consensus 82 ~~~~~l~~GDv~~~P~g~~H~~~N 105 (178)
T 1dgw_A 82 RDTYKLDQGDAIKIQAGTPFYLIN 105 (178)
T ss_dssp EEEEEEETTEEEEECTTCCEEEEE
T ss_pred cEEEEECCCCEEEECCCCeEEEEe
Confidence 346799999999999999998664
No 84
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=28.03 E-value=36 Score=27.19 Aligned_cols=26 Identities=23% Similarity=0.293 Sum_probs=21.3
Q ss_pred eeeeecCccEEEEeCccccCCCCCCCC
Q 024285 220 VPIEVKAGSLVLIHGDLIHQSFENQSS 246 (269)
Q Consensus 220 v~~~~~~Gdvvl~~~~~~H~~~~n~s~ 246 (269)
....+++||++++.+...|+.. |.++
T Consensus 184 ~~~~l~~Gd~i~ip~~~~H~~~-n~~~ 209 (243)
T 3h7j_A 184 CTVEMKFGTAYFCEPREDHGAI-NRSE 209 (243)
T ss_dssp EEEEECTTCEEEECTTCCEEEE-ECSS
T ss_pred EEEEECCCCEEEECCCCcEEeE-eCCC
Confidence 3578999999999999999876 4443
No 85
>1g6u_A Domain swapped dimer; designed three helix bundle, de novo protein; 1.48A {Synthetic} SCOP: k.9.1.1
Probab=27.74 E-value=82 Score=17.53 Aligned_cols=29 Identities=24% Similarity=0.405 Sum_probs=21.7
Q ss_pred HHHHhhhhccEEEecCCCCHHHHHHHHHHHHHHHcc
Q 024285 10 DNLNFFNSQGYVVLESFASDEEIEAMRKQMDHLLDG 45 (269)
Q Consensus 10 ~~~~~f~~~Gyvvl~~~l~~~~v~~l~~~~~~~~~~ 45 (269)
.+++.+.+.| |++++++.+.++++.+...
T Consensus 7 selqalkkeg-------fspeelaaleselqalekk 35 (48)
T 1g6u_A 7 SELQALKKEG-------FSPEELAALESELQALEKK 35 (48)
T ss_dssp HHHHHHHHTT-------CSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcC-------CCHHHHHHHHHHHHHHHHH
Confidence 3566677776 6899999999998876543
No 86
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=27.03 E-value=35 Score=27.89 Aligned_cols=39 Identities=10% Similarity=0.037 Sum_probs=28.9
Q ss_pred eeeecCccEEEEeCccccCCCCCCCCCCceEEEE-EEEeC
Q 024285 221 PIEVKAGSLVLIHGDLIHQSFENQSSKSRHAYSL-HVVET 259 (269)
Q Consensus 221 ~~~~~~Gdvvl~~~~~~H~~~~n~s~~~R~~~~~-~~~~~ 259 (269)
...+++||.+.|.+...|+-....+...|..+.. +|.+.
T Consensus 103 ~~~L~~GD~~~~~~~~~H~~~N~~~~~~~~l~v~~~y~~~ 142 (274)
T 1sef_A 103 THELEAGGYAYFTPEMKMYLANAQEADTEVFLYKKRYQPL 142 (274)
T ss_dssp EEEEETTEEEEECTTSCCEEEESSSSCEEEEEEEEECCCC
T ss_pred EEEECCCCEEEECCCCCEEEEeCCCCCEEEEEEEeeeeeC
Confidence 5789999999999999999774333446776666 56544
No 87
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=26.65 E-value=27 Score=28.31 Aligned_cols=22 Identities=18% Similarity=0.315 Sum_probs=19.4
Q ss_pred eeeeecCccEEEEeCccccCCC
Q 024285 220 VPIEVKAGSLVLIHGDLIHQSF 241 (269)
Q Consensus 220 v~~~~~~Gdvvl~~~~~~H~~~ 241 (269)
....+++||++++.+...|+-.
T Consensus 218 ~~~~l~~GD~i~~~~~~~H~~~ 239 (261)
T 1rc6_A 218 NWIPVKKGDYIFMGAYSLQAGY 239 (261)
T ss_dssp CEEEEETTCEEEECSSEEEEEE
T ss_pred EEEEeCCCCEEEECCCCcEEeE
Confidence 3578999999999999999855
No 88
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=26.49 E-value=34 Score=25.76 Aligned_cols=21 Identities=10% Similarity=-0.053 Sum_probs=19.2
Q ss_pred eeeecCccEEEEeCccccCCC
Q 024285 221 PIEVKAGSLVLIHGDLIHQSF 241 (269)
Q Consensus 221 ~~~~~~Gdvvl~~~~~~H~~~ 241 (269)
...+++||+++..+...|+..
T Consensus 87 ~~~l~~GD~v~IPpg~~H~i~ 107 (157)
T 4h7l_A 87 SYPLTKLLAISIPPLVRHRIV 107 (157)
T ss_dssp EEECCTTEEEEECTTCCEEEE
T ss_pred EEEeCCCCEEEECCCCeEeeE
Confidence 578999999999999999974
No 89
>3pbi_A Invasion protein; peptidoglycan hydrolase, extracellular, invasion related Pro cell WALL, NLPC-like module, hydrolase; 1.60A {Mycobacterium tuberculosis} PDB: 3i86_A
Probab=26.46 E-value=21 Score=28.37 Aligned_cols=11 Identities=36% Similarity=0.619 Sum_probs=9.5
Q ss_pred eecCccEEEEe
Q 024285 223 EVKAGSLVLIH 233 (269)
Q Consensus 223 ~~~~Gdvvl~~ 233 (269)
.+++||+|||.
T Consensus 158 ~lqpGDLVff~ 168 (214)
T 3pbi_A 158 EAKRGDLIFYG 168 (214)
T ss_dssp GCCTTCEEEES
T ss_pred hCCCCCEEEec
Confidence 68999999993
No 90
>3npf_A Putative dipeptidyl-peptidase VI; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: CSA GOL; 1.72A {Bacteroides ovatus} PDB: 3pvq_A
Probab=25.94 E-value=25 Score=29.36 Aligned_cols=38 Identities=21% Similarity=0.329 Sum_probs=25.0
Q ss_pred eecCccEEEEeC--------------------ccccCCCC----CCCC---------CCceEEEEEEEeCC
Q 024285 223 EVKAGSLVLIHG--------------------DLIHQSFE----NQSS---------KSRHAYSLHVVETD 260 (269)
Q Consensus 223 ~~~~Gdvvl~~~--------------------~~~H~~~~----n~s~---------~~R~~~~~~~~~~~ 260 (269)
.+++||+|||.. .++|+++. +.+. ..|++-..||.+..
T Consensus 220 ~~~pGDLvff~~~~~~~~~~~~~Hvgiy~g~~~~iha~~~V~i~~l~~~~~~~~~yw~~~~~~a~R~~~~~ 290 (306)
T 3npf_A 220 NVKRGDLVFFGRKATAERKEGISHVGIYLGNKQFIHALGDVHVSSMNPADQNYDEFNTKRLLFAVRFLPYI 290 (306)
T ss_dssp TCCTTCEEEEEECCCSSSCCEEEEEEEEEETTEEEEESSBEEEEESCTTSTTBCHHHHTTEEEEEECGGGT
T ss_pred cCCCccEEEECCCCccCCCCCCeEEEEEECCCEEEEcCCCEEEEeCCCccccccchhhhhEEEEEEeecCC
Confidence 578999999975 36888663 1121 34777777777543
No 91
>1nx8_A CARC, carbapenem synthase; jelly roll, unknown function; HET: AKG N7P; 2.30A {Pectobacterium carotovorum} SCOP: b.82.2.8 PDB: 1nx4_A*
Probab=25.53 E-value=50 Score=26.75 Aligned_cols=26 Identities=19% Similarity=0.408 Sum_probs=19.2
Q ss_pred HHHHHhhhhccEEEecCC-CCHHHHHH
Q 024285 9 SDNLNFFNSQGYVVLESF-ASDEEIEA 34 (269)
Q Consensus 9 ~~~~~~f~~~Gyvvl~~~-l~~~~v~~ 34 (269)
++..+.+.+.|+|+++++ +++++..+
T Consensus 30 ~~l~~~l~~~G~v~~rg~~~~~~~~~~ 56 (273)
T 1nx8_A 30 ETIKNLLMRQGFVVVKNLDIDSDTFRD 56 (273)
T ss_dssp HHHHHHHHHHCEEEECSCCCCHHHHHH
T ss_pred HHHHHHHHHCCEEEECCCCCCHHHHHH
Confidence 467788899999999997 45544433
No 92
>3eat_X Pyoverdine biosynthesis protein PVCB; paerucumarin, Fe/alpha-ketoglutarate dependent hydroxylase, 2-isocyano-6,7-dihydroxycoumarin; 2.50A {Pseudomonas aeruginosa}
Probab=25.14 E-value=73 Score=26.28 Aligned_cols=32 Identities=13% Similarity=0.132 Sum_probs=23.0
Q ss_pred HHHHhhhhccEEEecCC--C-CHHHHHHHHHHHHH
Q 024285 10 DNLNFFNSQGYVVLESF--A-SDEEIEAMRKQMDH 41 (269)
Q Consensus 10 ~~~~~f~~~Gyvvl~~~--l-~~~~v~~l~~~~~~ 41 (269)
+..+.+.+.|+|+++++ + ++++..++-+.+-.
T Consensus 47 ~L~~~l~~~gvv~fRgq~~l~~~~~~~~~a~~fG~ 81 (293)
T 3eat_X 47 WLKGLARSHHLLLLRGFAAFADAESLTRYCHDFGE 81 (293)
T ss_dssp HHHHHHHHHSEEEECSCBCCSSHHHHHHHHHHHSC
T ss_pred HHHHHHHHhCEEEECCCCCCCCHHHHHHHHHHhCC
Confidence 34445578999999998 5 78877776666653
No 93
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=24.43 E-value=44 Score=27.43 Aligned_cols=39 Identities=15% Similarity=0.094 Sum_probs=28.6
Q ss_pred eeeeeecCccEEEEeCccccCCCCCCCCC-CceEEEEEEEe
Q 024285 219 FVPIEVKAGSLVLIHGDLIHQSFENQSSK-SRHAYSLHVVE 258 (269)
Q Consensus 219 ~v~~~~~~Gdvvl~~~~~~H~~~~n~s~~-~R~~~~~~~~~ 258 (269)
.....+++||++++.+...|+-. |.++. -|+.++.-..+
T Consensus 229 ~~~~~v~~GD~~~~~~~~~h~~~-n~g~~~~~yl~~~d~nr 268 (278)
T 1sq4_A 229 QDWVEVEAGDFMWLRAFCPQACY-SGGPGRFRYLLYKDVNR 268 (278)
T ss_dssp TEEEEEETTCEEEEEESCCEEEE-CCSSSCEEEEEEEECSS
T ss_pred CEEEEeCCCCEEEECCCCCEEEE-cCCCCCEEEEEEEEcCC
Confidence 45679999999999999999844 55444 57777664443
No 94
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=24.40 E-value=55 Score=26.88 Aligned_cols=39 Identities=10% Similarity=0.110 Sum_probs=27.4
Q ss_pred eeeecCccEEEEeCccccCCCCCCCCCCceEEEE-EEEeC
Q 024285 221 PIEVKAGSLVLIHGDLIHQSFENQSSKSRHAYSL-HVVET 259 (269)
Q Consensus 221 ~~~~~~Gdvvl~~~~~~H~~~~n~s~~~R~~~~~-~~~~~ 259 (269)
...+++||.+++.+...|+-....+...|..+.. +|.+.
T Consensus 109 ~~~L~~GD~i~ip~~~~H~~~N~g~~~~~~l~v~~~y~~~ 148 (278)
T 1sq4_A 109 VHAMQPGGYAFIPPGADYKVRNTTGQHTRFHWIRKHYQKV 148 (278)
T ss_dssp EEEECTTEEEEECTTCCEEEECCSSSCEEEEEEEEECCCC
T ss_pred EEEECCCCEEEECCCCcEEEEECCCCCEEEEEEEeccccC
Confidence 5689999999999999999764333345655544 34433
No 95
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=24.36 E-value=54 Score=26.39 Aligned_cols=28 Identities=18% Similarity=0.296 Sum_probs=23.1
Q ss_pred eeeeecCccEEEEeCccccCCCCCCCCCC
Q 024285 220 VPIEVKAGSLVLIHGDLIHQSFENQSSKS 248 (269)
Q Consensus 220 v~~~~~~Gdvvl~~~~~~H~~~~n~s~~~ 248 (269)
....+++||++++.+.+.|+-. |.++.+
T Consensus 102 ~~~~l~~GD~i~iP~g~~H~~~-N~~~~~ 129 (239)
T 2xlg_A 102 YSIQSEPKQLIYSPNHYMHGFV-NPTDKT 129 (239)
T ss_dssp EEEECCTTEEEEECTTEEEEEE-CCSSSC
T ss_pred eEEEECCCCEEEECCCCCEEEE-eCCCCC
Confidence 3679999999999999999965 555555
No 96
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=24.31 E-value=39 Score=24.33 Aligned_cols=22 Identities=18% Similarity=0.089 Sum_probs=19.0
Q ss_pred eeeeecCccEEEEeCccccCCC
Q 024285 220 VPIEVKAGSLVLIHGDLIHQSF 241 (269)
Q Consensus 220 v~~~~~~Gdvvl~~~~~~H~~~ 241 (269)
....+++||++++.+...|.-.
T Consensus 93 ~~~~l~~GD~i~~p~g~~h~~~ 114 (133)
T 2pyt_A 93 ETMIAKAGDVMFIPKGSSIEFG 114 (133)
T ss_dssp EEEEEETTCEEEECTTCEEEEE
T ss_pred EEEEECCCcEEEECCCCEEEEE
Confidence 3468999999999999998865
No 97
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=23.55 E-value=54 Score=25.87 Aligned_cols=34 Identities=18% Similarity=0.252 Sum_probs=24.7
Q ss_pred eeeeecCccEEEEeCccccCCCCCCCCCCceEEEE
Q 024285 220 VPIEVKAGSLVLIHGDLIHQSFENQSSKSRHAYSL 254 (269)
Q Consensus 220 v~~~~~~Gdvvl~~~~~~H~~~~n~s~~~R~~~~~ 254 (269)
....+++||.+++.+...|+.... .+..+..+++
T Consensus 191 ~~~~l~~Gd~i~ip~~~~H~~~~~-~~~~~~ll~~ 224 (227)
T 3rns_A 191 KPFIVKKGESAVLPANIPHAVEAE-TENFKMLLIL 224 (227)
T ss_dssp EEEEEETTEEEEECTTSCEEEECC-SSCEEEEEEE
T ss_pred EEEEECCCCEEEECCCCcEEEEeC-CCCEEEEEEE
Confidence 367999999999999999987542 2344554443
No 98
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=23.52 E-value=57 Score=26.57 Aligned_cols=31 Identities=13% Similarity=0.155 Sum_probs=20.8
Q ss_pred CCCCHHH----HHhhhhccEEEecCC-CCHHHHHHH
Q 024285 5 GNLNSDN----LNFFNSQGYVVLESF-ASDEEIEAM 35 (269)
Q Consensus 5 ~~lt~~~----~~~f~~~Gyvvl~~~-l~~~~v~~l 35 (269)
..|+++. .+.+.+.|+|+++++ +++++..++
T Consensus 25 ~~l~~~~~~~l~~~l~~~Gvv~frg~~~~~~~~~~~ 60 (283)
T 1otj_A 25 RPLSDNQFEQLYHAVLRHQVVFLRDQAITPQQQRAL 60 (283)
T ss_dssp SCCCHHHHHHHHHHHHHHSEEEECSCCCCHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHH
Confidence 3455544 455677999999997 566655543
No 99
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=23.49 E-value=41 Score=23.93 Aligned_cols=22 Identities=18% Similarity=0.076 Sum_probs=19.0
Q ss_pred eeeecCccEEEEeCccccCCCC
Q 024285 221 PIEVKAGSLVLIHGDLIHQSFE 242 (269)
Q Consensus 221 ~~~~~~Gdvvl~~~~~~H~~~~ 242 (269)
...+++||++++.....|+-..
T Consensus 88 ~~~l~~GD~~~ip~g~~h~~~~ 109 (123)
T 3bcw_A 88 VHAVKAGDAFIMPEGYTGRWEV 109 (123)
T ss_dssp EEEEETTCEEEECTTCCCEEEE
T ss_pred EEEECCCCEEEECCCCeEEEEE
Confidence 5789999999999999988653
No 100
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=23.29 E-value=47 Score=23.35 Aligned_cols=29 Identities=7% Similarity=0.064 Sum_probs=21.5
Q ss_pred eeeecCccEEEEeCccccCCCCCCCCCCce
Q 024285 221 PIEVKAGSLVLIHGDLIHQSFENQSSKSRH 250 (269)
Q Consensus 221 ~~~~~~Gdvvl~~~~~~H~~~~n~s~~~R~ 250 (269)
...+++||++++.....|.-. |.++..|.
T Consensus 78 ~~~l~~GD~v~ip~g~~H~~~-~~~~~~~~ 106 (119)
T 3lwc_A 78 TVTAGPGEIVYMPKGETVTIR-SHEEGALT 106 (119)
T ss_dssp EEEECTTCEEEECTTCEEEEE-EEEEEEEE
T ss_pred EEEECCCCEEEECCCCEEEEE-cCCCCeEE
Confidence 568999999999999999853 33333443
No 101
>3ne0_A Resuscitation promoting factor interacting protei; cell WALL, peptidoglycan, hydrolase; 1.00A {Mycobacterium tuberculosis} PDB: 3pbc_A 3s0q_A 2xiv_A*
Probab=23.25 E-value=36 Score=27.01 Aligned_cols=12 Identities=8% Similarity=0.432 Sum_probs=9.9
Q ss_pred eeecCccEEEEe
Q 024285 222 IEVKAGSLVLIH 233 (269)
Q Consensus 222 ~~~~~Gdvvl~~ 233 (269)
-.+++||+|||.
T Consensus 157 ~~lqpGDLvFf~ 168 (214)
T 3ne0_A 157 SQMRRGDVIFYG 168 (214)
T ss_dssp GGCCTTCEEEES
T ss_pred hhCCCCCEEEec
Confidence 368999999994
No 102
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=23.13 E-value=57 Score=27.62 Aligned_cols=22 Identities=9% Similarity=0.030 Sum_probs=19.8
Q ss_pred eeeeecCccEEEEeCccccCCC
Q 024285 220 VPIEVKAGSLVLIHGDLIHQSF 241 (269)
Q Consensus 220 v~~~~~~Gdvvl~~~~~~H~~~ 241 (269)
....+++||++++.+..+|.-.
T Consensus 278 ~~~~l~~GD~~~ip~~~~H~~~ 299 (361)
T 2vqa_A 278 SVSRLQQGDVGYVPKGYGHAIR 299 (361)
T ss_dssp EEEEECTTCEEEECTTCEEEEE
T ss_pred EEEEECCCCEEEECCCCeEEeE
Confidence 4689999999999999999865
No 103
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=22.82 E-value=62 Score=27.50 Aligned_cols=27 Identities=15% Similarity=0.319 Sum_probs=23.3
Q ss_pred CCeeeeeecCccEEEEeCccccCCCCC
Q 024285 217 NDFVPIEVKAGSLVLIHGDLIHQSFEN 243 (269)
Q Consensus 217 ~~~v~~~~~~Gdvvl~~~~~~H~~~~n 243 (269)
.....+.++|||++.+=...||.+...
T Consensus 215 ~~~~~~~L~pGD~LyiP~gwwH~v~s~ 241 (342)
T 1vrb_A 215 PDAEIVNLTPGTMLYLPRGLWHSTKSD 241 (342)
T ss_dssp CSSEEEEECTTCEEEECTTCEEEEECS
T ss_pred CCceEEEECCCcEEEeCCCccEEEEEC
Confidence 456788999999999999999998753
No 104
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=22.49 E-value=51 Score=27.93 Aligned_cols=31 Identities=13% Similarity=0.042 Sum_probs=23.0
Q ss_pred eeeeecCccEEEEeCccccCCCCCCCCCCce
Q 024285 220 VPIEVKAGSLVLIHGDLIHQSFENQSSKSRH 250 (269)
Q Consensus 220 v~~~~~~Gdvvl~~~~~~H~~~~n~s~~~R~ 250 (269)
....+++||++++.+.++|.......+..++
T Consensus 96 ~~~~l~~GD~~~ip~g~~H~~~n~~~~~~~~ 126 (361)
T 2vqa_A 96 EIADVDKGGLWYFPRGWGHSIEGIGPDTAKF 126 (361)
T ss_dssp EEEEEETTEEEEECTTCEEEEEECSSSCEEE
T ss_pred EEEEEcCCCEEEECCCCeEEEEeCCCCCEEE
Confidence 4579999999999999999865432233444
No 105
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=22.37 E-value=76 Score=26.82 Aligned_cols=40 Identities=10% Similarity=0.107 Sum_probs=29.3
Q ss_pred CeeeeeecCccEEEEeCccccCCCCCCCCCCceEEEEEEEeCC
Q 024285 218 DFVPIEVKAGSLVLIHGDLIHQSFENQSSKSRHAYSLHVVETD 260 (269)
Q Consensus 218 ~~v~~~~~~Gdvvl~~~~~~H~~~~n~s~~~R~~~~~~~~~~~ 260 (269)
....+.++|||+|+.-+.-||.+.... .=.++.+.|....
T Consensus 238 ~~~~~~L~pGD~LyiP~gWwH~v~~l~---~sisvn~~~~~~~ 277 (338)
T 3al5_A 238 RRYECSLEAGDVLFIPALWFHNVISEE---FGVGVNIFWKHLP 277 (338)
T ss_dssp CEEEEEECTTCEEEECTTCEEEEEESS---CEEEEEEEECSSC
T ss_pred CCEEEEECCCCEEEECCCCeEEEeeCC---CEEEEEEEecCCc
Confidence 468899999999999999999987532 2245555565543
No 106
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=21.98 E-value=63 Score=26.65 Aligned_cols=36 Identities=11% Similarity=0.161 Sum_probs=23.6
Q ss_pred CCCCCHH----HHHhhhhccEEEecCC--CCHHHHHHHHHHH
Q 024285 4 AGNLNSD----NLNFFNSQGYVVLESF--ASDEEIEAMRKQM 39 (269)
Q Consensus 4 ~~~lt~~----~~~~f~~~Gyvvl~~~--l~~~~v~~l~~~~ 39 (269)
...|+++ ..+.+.+.|+|+++++ +++++..++-+.+
T Consensus 34 ~~~l~~~~~~~l~~~l~~~Gvv~fRg~~~l~~~~~~~~~~~f 75 (301)
T 1oih_A 34 SPDLDAATVEAIQAALVRHKVIFFRGQTHLDDQSQEGFAKLL 75 (301)
T ss_dssp CTTCCHHHHHHHHHHHHHHSEEEECCCTTCCHHHHHHHHHTT
T ss_pred cccCCHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHh
Confidence 3446654 4566778999999997 6766555544433
No 107
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=21.73 E-value=44 Score=22.62 Aligned_cols=35 Identities=14% Similarity=0.146 Sum_probs=24.9
Q ss_pred eeeecCccEEEEeCccccCCCCCCCCCCceEEEEEE
Q 024285 221 PIEVKAGSLVLIHGDLIHQSFENQSSKSRHAYSLHV 256 (269)
Q Consensus 221 ~~~~~~Gdvvl~~~~~~H~~~~n~s~~~R~~~~~~~ 256 (269)
...+++||++++.....|... |.++.+=..+.+.+
T Consensus 60 ~~~l~aGd~~~~p~G~~H~~~-N~g~~~l~fi~vE~ 94 (98)
T 2ozi_A 60 LAQLKTGRSYARKAGVQHDVR-NESTAEIVFLEIEL 94 (98)
T ss_dssp CCCBCTTCCEEECTTCEEEEE-ECSSSCEEEEEEEE
T ss_pred EEEECCCCEEEECCCCceeCE-ECCCCCEEEEEEEE
Confidence 568999999999999999884 55555433344443
No 108
>2bdr_A Ureidoglycolate hydrolase; all beta protein, structural genomics, PSI, protein structur initiative, northeast structural genomics consortium; 1.60A {Pseudomonas putida} SCOP: b.82.1.14
Probab=21.69 E-value=82 Score=24.07 Aligned_cols=39 Identities=8% Similarity=-0.032 Sum_probs=28.8
Q ss_pred CCeeeeeecCccEEEEeCccccCCCCCCCCCCceEEEEE
Q 024285 217 NDFVPIEVKAGSLVLIHGDLIHQSFENQSSKSRHAYSLH 255 (269)
Q Consensus 217 ~~~v~~~~~~Gdvvl~~~~~~H~~~~n~s~~~R~~~~~~ 255 (269)
.....+.+++|..|-++..+||+..--......+++.-+
T Consensus 105 ~~lrAF~~~ggqgV~y~~GtWH~pl~~l~~~~dF~vvdr 143 (175)
T 2bdr_A 105 GLVRAFRSNGRQGVNYHRGVWHHPVLTIEKRDDFLVVDR 143 (175)
T ss_dssp GGCEEEEECSSCEEEECTTCEECSCEESSSEEEEEEEEE
T ss_pred cceEEEEeCCCeEEEeCCCceecccccCCCCceEEEEEc
Confidence 467889999999999999999966544444455554433
No 109
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=21.63 E-value=61 Score=27.70 Aligned_cols=23 Identities=13% Similarity=0.078 Sum_probs=20.1
Q ss_pred eeeeecCccEEEEeCccccCCCC
Q 024285 220 VPIEVKAGSLVLIHGDLIHQSFE 242 (269)
Q Consensus 220 v~~~~~~Gdvvl~~~~~~H~~~~ 242 (269)
....+++||++++.+..+|.-..
T Consensus 139 ~~~~l~~GD~~~iP~g~~H~~~n 161 (354)
T 2d40_A 139 ERTPMNEGDFILTPQWRWHDHGN 161 (354)
T ss_dssp EEEECCTTCEEEECTTSCEEEEC
T ss_pred EEEEEcCCCEEEECCCCcEEeEe
Confidence 46799999999999999998653
No 110
>3s6e_A RNA-binding protein 39; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-biology; HET: MSE CIT; 0.95A {Mus musculus} PDB: 2lq5_A
Probab=21.48 E-value=57 Score=22.77 Aligned_cols=28 Identities=4% Similarity=0.026 Sum_probs=22.5
Q ss_pred EEEecCCCCHHH------HHHHHHHHHHHHccCC
Q 024285 20 YVVLESFASDEE------IEAMRKQMDHLLDGFD 47 (269)
Q Consensus 20 yvvl~~~l~~~~------v~~l~~~~~~~~~~~~ 47 (269)
+|+|+|++++++ .+.+.+++.+......
T Consensus 9 vv~L~Nm~~~~e~~d~~~~~el~edl~~~f~kfG 42 (114)
T 3s6e_A 9 CFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHG 42 (114)
T ss_dssp EEEEESSCCTTTCCSTTHHHHHHHHHHHHHTTTT
T ss_pred EEEEECCCChHHccChhHHHHHHHHHHHHHhccC
Confidence 689999999875 7888888888776653
No 111
>2qt7_A Receptor-type tyrosine-protein phosphatase-like N; IA-2, ICA-512, protein-tyrosine phosphatase, transmembrane protein, diabetes, autoimmunity; 1.30A {Homo sapiens} PDB: 3n01_A 3np5_A 3ng8_A 3n4w_A
Probab=20.94 E-value=1.2e+02 Score=20.49 Aligned_cols=30 Identities=13% Similarity=0.078 Sum_probs=25.6
Q ss_pred hhccEEEe-cCCCCHHHHHHHHHHHHHHHcc
Q 024285 16 NSQGYVVL-ESFASDEEIEAMRKQMDHLLDG 45 (269)
Q Consensus 16 ~~~Gyvvl-~~~l~~~~v~~l~~~~~~~~~~ 45 (269)
++.||++. .+.++.++=..|.+.+.+++.-
T Consensus 2 eeygYI~~~~~~ls~~eG~~l~~~la~ll~l 32 (91)
T 2qt7_A 2 EEYGYIVTDQKPLSLAAGVKLLEILAEHVHM 32 (91)
T ss_dssp CCEEEEEESCTTCCHHHHHHHHHHHHHHHTS
T ss_pred ceeEEEEecCCCCCHHHHHHHHHHHHHHhcC
Confidence 46899999 6799999999999999988754
No 112
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=20.77 E-value=55 Score=27.85 Aligned_cols=30 Identities=10% Similarity=0.068 Sum_probs=23.3
Q ss_pred eeeeecCccEEEEeCccccCCCCCCCCCCce
Q 024285 220 VPIEVKAGSLVLIHGDLIHQSFENQSSKSRH 250 (269)
Q Consensus 220 v~~~~~~Gdvvl~~~~~~H~~~~n~s~~~R~ 250 (269)
....+++||++++.+.+.|+-. |.++..|.
T Consensus 94 ~~~~L~~GD~v~ip~g~~H~~~-n~~~~~~~ 123 (350)
T 1juh_A 94 QTRVLSSGDYGSVPRNVTHTFQ-IQDPDTEM 123 (350)
T ss_dssp EEEEEETTCEEEECTTEEEEEE-ECSTTEEE
T ss_pred EEEEECCCCEEEECCCCcEEEE-eCCCCCEE
Confidence 4578999999999999999965 44444543
No 113
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=20.74 E-value=60 Score=26.96 Aligned_cols=30 Identities=20% Similarity=0.125 Sum_probs=22.7
Q ss_pred eeeecCccEEEEeCccccCCCCCCCCCCceE
Q 024285 221 PIEVKAGSLVLIHGDLIHQSFENQSSKSRHA 251 (269)
Q Consensus 221 ~~~~~~Gdvvl~~~~~~H~~~~n~s~~~R~~ 251 (269)
...+++||++++.+.++|+-.. .++..|+.
T Consensus 86 ~~~l~~Gd~~~~p~~~~H~~~n-~~~~~~~~ 115 (337)
T 1y3t_A 86 RYLLISGDYANIPAGTPHSYRM-QSHRTRLV 115 (337)
T ss_dssp EEEECTTCEEEECTTCCEEEEE-CSTTEEEE
T ss_pred EEEECCCCEEEECCCCcEEEEE-CCCCeEEE
Confidence 4789999999999999998663 34434443
No 114
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=20.66 E-value=60 Score=27.00 Aligned_cols=23 Identities=13% Similarity=0.297 Sum_probs=20.2
Q ss_pred eeeeecCccEEEEeCccccCCCC
Q 024285 220 VPIEVKAGSLVLIHGDLIHQSFE 242 (269)
Q Consensus 220 v~~~~~~Gdvvl~~~~~~H~~~~ 242 (269)
....+++||++++.+...|+-..
T Consensus 257 ~~~~l~~GD~~~ip~~~~H~~~n 279 (337)
T 1y3t_A 257 QEIQLNPGDFLHVPANTVHSYRL 279 (337)
T ss_dssp EEEEECTTCEEEECTTCCEEEEE
T ss_pred EEEEECCCCEEEECCCCeEEEEE
Confidence 46799999999999999998653
No 115
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=20.52 E-value=1e+02 Score=25.55 Aligned_cols=37 Identities=8% Similarity=0.175 Sum_probs=25.4
Q ss_pred CCCCCHHH----HHhhhhccEEEecCC--CCHHHHHHHHHHHH
Q 024285 4 AGNLNSDN----LNFFNSQGYVVLESF--ASDEEIEAMRKQMD 40 (269)
Q Consensus 4 ~~~lt~~~----~~~f~~~Gyvvl~~~--l~~~~v~~l~~~~~ 40 (269)
+..|++++ .+.+.+.|.|++++. +++++..++-+.+-
T Consensus 28 ~~~L~d~~~~~l~~al~~~gvv~fR~q~~l~~~~~~~fa~~fG 70 (301)
T 3r1j_A 28 GGDLDDATVEQIRRALLTHKVIFFRHQHHLDDSRQLEFARLLG 70 (301)
T ss_dssp STTCCHHHHHHHHHHHHHHSEEEECCCTTCCHHHHHHHHHHHS
T ss_pred cccCCHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHhcC
Confidence 34566654 455667999999998 88877666555543
No 116
>2krx_A ASL3597 protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, unknown function; NMR {Nostoc SP}
Probab=20.05 E-value=58 Score=22.15 Aligned_cols=20 Identities=30% Similarity=0.587 Sum_probs=14.8
Q ss_pred hhhccEEEec-----CCCCHHHHHH
Q 024285 15 FNSQGYVVLE-----SFASDEEIEA 34 (269)
Q Consensus 15 f~~~Gyvvl~-----~~l~~~~v~~ 34 (269)
|+.|+|||++ .|++++++.+
T Consensus 7 yq~D~yVvLEp~~~EqfLT~~Ell~ 31 (94)
T 2krx_A 7 YQQDNFVVLETNQPEQFLTTIELLE 31 (94)
T ss_dssp CCCCCEEEEESSSCSEEECHHHHHH
T ss_pred cccCCEEEecCCCCcccCCHHHHHH
Confidence 5789999985 4777765544
No 117
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=20.00 E-value=1.2e+02 Score=25.13 Aligned_cols=37 Identities=16% Similarity=0.180 Sum_probs=31.2
Q ss_pred HHHHHhhhhccEEEecC-CCCHHHHHHHHHHHHHHHcc
Q 024285 9 SDNLNFFNSQGYVVLES-FASDEEIEAMRKQMDHLLDG 45 (269)
Q Consensus 9 ~~~~~~f~~~Gyvvl~~-~l~~~~v~~l~~~~~~~~~~ 45 (269)
++..+++++.||+.|.| -++.+.++++.+...+..+.
T Consensus 24 ~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~l 61 (312)
T 3oox_A 24 QELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFAL 61 (312)
T ss_dssp HHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCC
Confidence 45678899999999988 58999999999998887753
Done!